Citrus Sinensis ID: 012188
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 468 | 2.2.26 [Sep-21-2011] | |||||||
| P23106 | 281 | 2-hydroxymuconate semiald | yes | no | 0.506 | 0.843 | 0.258 | 4e-10 | |
| P19076 | 283 | 2-hydroxymuconate semiald | N/A | no | 0.429 | 0.710 | 0.254 | 2e-08 | |
| C5CN82 | 266 | Putative aminoacrylate hy | no | no | 0.188 | 0.330 | 0.305 | 7e-06 | |
| Q5EA59 | 342 | Abhydrolase domain-contai | yes | no | 0.192 | 0.263 | 0.395 | 8e-05 | |
| A1JMX1 | 278 | Putative aminoacrylate hy | yes | no | 0.181 | 0.305 | 0.307 | 0.0003 | |
| Q8VD66 | 342 | Abhydrolase domain-contai | yes | no | 0.164 | 0.225 | 0.370 | 0.0006 | |
| Q8TB40 | 342 | Abhydrolase domain-contai | yes | no | 0.164 | 0.225 | 0.370 | 0.0006 | |
| A4W922 | 270 | Putative aminoacrylate hy | yes | no | 0.472 | 0.818 | 0.217 | 0.0008 |
| >sp|P23106|XYLF_PSEPU 2-hydroxymuconate semialdehyde hydrolase OS=Pseudomonas putida GN=xylF PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 124/271 (45%), Gaps = 34/271 (12%)
Query: 184 TLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIE 243
L + GP++ T +F S+ T R+ A D+LGFG S +P D Y+ ++
Sbjct: 32 ALLIHGSGPASPPGPTGAGSFRSSQ--TRRVIAPDMLGFGYSERPADGKYSQARWVEHA- 88
Query: 244 KSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAP--PYYPVPKGAQASQYV 301
V++ ++ IV +S G LALALA++HP V+ L L+ +P+ G + +
Sbjct: 89 IGVLDALGIQQGDIVGNSFGGGLALALAIRHPERVRRLVLMGSVGVSFPITAGLETA--- 145
Query: 302 MRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEG 361
W + S+A ++ R + L V + LA+L + IR E
Sbjct: 146 ---------W---GYTPSLA----NMRRLLDLFAHDRTLVNDELAELRYQASIRPGFQES 189
Query: 362 FFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQR 421
F + + ++ +N+ D + A+ N + V HG +D +IP++ S + +
Sbjct: 190 FAAMFPPPRQNGVDDL---ASNETD--IRALPN----ETLVIHGREDRIIPLQASLTLAQ 240
Query: 422 KIPRARVKVIEKKDHITIVVGRQKTFARELE 452
IP A++ V + H T + ++ FAR +E
Sbjct: 241 WIPNAQLHVFGQCGHWTQIEHAER-FARLVE 270
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Catalyzes the conversion of 2-hydroxymuconate semialdehyde to 2-hydroxypent-2,4-dienoate. Pseudomonas putida (taxid: 303) EC: 3EC: .EC: 7EC: .EC: 1EC: .EC: 9 |
| >sp|P19076|DMPD_PSEUF 2-hydroxymuconate semialdehyde hydrolase OS=Pseudomonas sp. (strain CF600) GN=dmpD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 103/232 (44%), Gaps = 31/232 (13%)
Query: 211 TYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALAL 270
+ R+ A D+LGFG S +P D+ Y +D V++ +++ +V +S G +ALAL
Sbjct: 58 SRRVIAPDMLGFGYSERPADAQYNRDVWVDH-AVGVLDALEIEQADLVGNSFGGGIALAL 116
Query: 271 AVKHPGSVKSLTLL--APPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHIS 328
A++HP V+ L L+ A +P+ +G A VW + S A +
Sbjct: 117 AIRHPERVRRLVLMGSAGVSFPITEGLDA------------VW---GYNPSFA----EMR 157
Query: 329 RTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGY 388
R + + + V + LA+L + IR E F + + A
Sbjct: 158 RLLDIFAFDRNLVNDELAELRYQASIRPGFHESFAAMFPAPRQRWVDGLASAEA------ 211
Query: 389 LDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIV 440
A+R + + V HG +D++IP++ S + I RA++ V + H T +
Sbjct: 212 --AIRA-LPHETLVIHGREDQIIPLQTSLTLADWIARAQLHVFGQCGHWTQI 260
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Catalyzes the conversion of 2-hydroxymuconate semialdehyde to 2-hydroxypent-2,4-dienoate. Pseudomonas sp. (strain CF600) (taxid: 79676) EC: 3 EC: . EC: 7 EC: . EC: 1 EC: . EC: 9 |
| >sp|C5CN82|RUTD_VARPS Putative aminoacrylate hydrolase RutD OS=Variovorax paradoxus (strain S110) GN=rutD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 191 GPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHL-DMIEKSVIEP 249
G +AFW P + ++ +R+ A D G GRSP D+ Y + + D+++ +++
Sbjct: 24 GSAAFWQ----PQLGALLEAGHRVIAYDQRGTGRSPAALDAGYAIADMARDVVQ--ILDA 77
Query: 250 NKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLL 284
H+V H+LG ++ L LA+ P V SL L+
Sbjct: 78 TATPRCHLVGHALGGLVGLQLALDEPARVASLVLV 112
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May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation. Variovorax paradoxus (strain S110) (taxid: 543728) EC: 3 EC: . EC: 5 EC: . EC: 1 EC: . EC: - |
| >sp|Q5EA59|ABHD4_BOVIN Abhydrolase domain-containing protein 4 OS=Bos taurus GN=ABHD4 PE=2 SV=1 | Back alignment and function description |
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Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 208 SKSTYR-LFAIDLLGFGRSPKPT---DSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLG 263
S ST R L DLLGFGRS +PT D E + IE + E + S ++ HSLG
Sbjct: 90 SLSTRRTLHTFDLLGFGRSSRPTFPRDPEGAEDEFVTSIE-TWRESMGIPSMILLGHSLG 148
Query: 264 CILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQ 299
LA + ++K+P VK L L+ P +P+ + A SQ
Sbjct: 149 GFLATSYSIKYPDRVKHLILVDPWGFPL-RPADPSQ 183
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Lysophospholipase selective for N-acyl phosphatidylethanolamine (NAPE). Contributes to the biosynthesis of N-acyl ethanolamines, including the endocannabinoid anandamide by hydrolyzing the sn-1 and sn-2 acyl chains from N-acyl phosphatidylethanolamine (NAPE) generating glycerophospho-N-acyl ethanolamine (GP-NAE), an intermediate for N-acyl ethanolamine biosynthesis. Hydrolyzes substrates bearing saturated, monounsaturated, polyunsaturated N-acyl chains. Shows no significant activity towards other lysophospholipids, including lysophosphatidylcholine, lysophosphatidylethanolamine and lysophosphatidylserine. Bos taurus (taxid: 9913) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|A1JMX1|RUTD_YERE8 Putative aminoacrylate hydrolase RutD OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=rutD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 191 GPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPN 250
G FW L SA +R+ D G GRS S YT+ + D + ++
Sbjct: 24 GSGRFWQPQL-----SALGQHFRVITYDQYGTGRSAGVIPSGYTLADMADEL-ADLLASQ 77
Query: 251 KVKSFHIVAHSLGCILALALAVKHPGSVKSL 281
++ +H V H+LG ++ L LA+ HP V+ L
Sbjct: 78 HIERYHFVGHALGGMIGLQLALSHPQCVERL 108
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May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation. Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) (taxid: 393305) EC: 3 EC: . EC: 5 EC: . EC: 1 EC: . EC: - |
| >sp|Q8VD66|ABHD4_MOUSE Abhydrolase domain-containing protein 4 OS=Mus musculus GN=Abhd4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 214 LFAIDLLGFGRSPKPT---DSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALAL 270
L DLLGFGRS +PT D E + IE + E + + ++ HSLG LA +
Sbjct: 97 LHTFDLLGFGRSSRPTFPRDPEGAEDEFVASIE-TWRETMGIPTMILLGHSLGGFLATSY 155
Query: 271 AVKHPGSVKSLTLLAPPYYPV 291
++K+P VK L L+ P +P+
Sbjct: 156 SIKYPERVKHLILVDPWGFPL 176
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Lysophospholipase selective for N-acyl phosphatidylethanolamine (NAPE). Contributes to the biosynthesis of N-acyl ethanolamines, including the endocannabinoid anandamide by hydrolyzing the sn-1 and sn-2 acyl chains from N-acyl phosphatidylethanolamine (NAPE) generating glycerophospho-N-acyl ethanolamine (GP-NAE), an intermediate for N-acyl ethanolamine biosynthesis. Hydrolyzes substrates bearing saturated, monounsaturated, polyunsaturated N-acyl chains. Shows no significant activity towards other lysophospholipids, including lysophosphatidylcholine, lysophosphatidylethanolamine and lysophosphatidylserine. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q8TB40|ABHD4_HUMAN Abhydrolase domain-containing protein 4 OS=Homo sapiens GN=ABHD4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 214 LFAIDLLGFGRSPKPT---DSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALAL 270
L DLLGFGRS +P D E + IE + E + S ++ HSLG LA +
Sbjct: 97 LHTFDLLGFGRSSRPAFPRDPEGAEDEFVTSIE-TWRETMGIPSMILLGHSLGGFLATSY 155
Query: 271 AVKHPGSVKSLTLLAPPYYPV 291
++K+P VK L L+ P +P+
Sbjct: 156 SIKYPDRVKHLILVDPWGFPL 176
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Lysophospholipase selective for N-acyl phosphatidylethanolamine (NAPE). Contributes to the biosynthesis of N-acyl ethanolamines, including the endocannabinoid anandamide by hydrolyzing the sn-1 and sn-2 acyl chains from N-acyl phosphatidylethanolamine (NAPE) generating glycerophospho-N-acyl ethanolamine (GP-NAE), an intermediate for N-acyl ethanolamine biosynthesis. Hydrolyzes substrates bearing saturated, monounsaturated, polyunsaturated N-acyl chains. Shows no significant activity towards other lysophospholipids, including lysophosphatidylcholine, lysophosphatidylethanolamine and lysophosphatidylserine. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|A4W922|RUTD_ENT38 Putative aminoacrylate hydrolase RutD OS=Enterobacter sp. (strain 638) GN=rutD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 96/253 (37%), Gaps = 32/253 (12%)
Query: 184 TLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIE 243
L G ++W L +A + Y++ D G G + YT+ D +
Sbjct: 17 VLIAGLGGSGSYWLPQL-----AALEQEYQVVCYDQRGTGNNAGELPHGYTLGNMADELY 71
Query: 244 KSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMR 303
++++ + F ++ H+LG ++ L LA+ HP +V++L + G + R
Sbjct: 72 QALLNAG-IPRFTVIGHALGALVGLQLAIAHPDAVRALVCV--------NGWLSLNAHTR 122
Query: 304 KVAPRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFF 363
+ R L A GA W E ++ + L +++A R L F
Sbjct: 123 RCFQIRERLLHAGGAQ--AWVE--AQPLFLYPA------DWMAARAPRMEAEEALALAHF 172
Query: 364 CHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKI 423
T+N L + D A HV C V + DD L+P CS + +
Sbjct: 173 QGTNNLQRRLL------ALKQAD--FRAQAKHVHCPVQIICSTDDLLVPSVCSTELHAAL 224
Query: 424 PRARVKVIEKKDH 436
P + V+ + H
Sbjct: 225 PGSHKTVMRQGGH 237
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May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation. Enterobacter sp. (strain 638) (taxid: 399742) EC: 3 EC: . EC: 5 EC: . EC: 1 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 468 | ||||||
| 255555759 | 476 | valacyclovir hydrolase, putative [Ricinu | 0.974 | 0.957 | 0.788 | 0.0 | |
| 225426578 | 476 | PREDICTED: putative aminoacrylate hydrol | 0.974 | 0.957 | 0.805 | 0.0 | |
| 224053721 | 469 | predicted protein [Populus trichocarpa] | 0.950 | 0.948 | 0.774 | 0.0 | |
| 224075244 | 476 | predicted protein [Populus trichocarpa] | 0.959 | 0.943 | 0.760 | 0.0 | |
| 356533695 | 490 | PREDICTED: 2-hydroxymuconic semialdehyde | 0.963 | 0.920 | 0.691 | 0.0 | |
| 449452182 | 476 | PREDICTED: uncharacterized protein LOC10 | 0.929 | 0.913 | 0.641 | 1e-175 | |
| 15233707 | 498 | hydrolase, alpha/beta fold family protei | 0.972 | 0.913 | 0.615 | 1e-169 | |
| 297799590 | 498 | hydrolase, alpha/beta fold family protei | 0.972 | 0.913 | 0.611 | 1e-168 | |
| 297852612 | 469 | hypothetical protein ARALYDRAFT_474084 [ | 0.910 | 0.908 | 0.591 | 1e-157 | |
| 6633825 | 637 | F1N19.24 [Arabidopsis thaliana] | 0.910 | 0.668 | 0.587 | 1e-156 |
| >gi|255555759|ref|XP_002518915.1| valacyclovir hydrolase, putative [Ricinus communis] gi|223541902|gb|EEF43448.1| valacyclovir hydrolase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 792 bits (2045), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/473 (78%), Positives = 418/473 (88%), Gaps = 17/473 (3%)
Query: 5 MCKTKLVLSFTGSLLNKAVSFIVFSFLDLFDFLLCMLYKVADFFIEAEWKPCYCSSAKEA 64
M KT++VL+ T +++A+SFIVFSFLDL D +LC YKVADF IEAEWKPCYC+SAKEA
Sbjct: 4 MGKTRMVLTLTSRGIHEALSFIVFSFLDLLDCILCFAYKVADFLIEAEWKPCYCTSAKEA 63
Query: 65 ITSSGKILVSEQGKSKIVCLTSSKLHLEEISDTLYTRPSLVSEASKQTVNELKRLKVDGN 124
ITSSGKILVSE+G+SKIVCL+SSKL LEEISDTLY RPSL+SE SK TVNELKR+KV+
Sbjct: 64 ITSSGKILVSEKGESKIVCLSSSKLELEEISDTLYARPSLLSEVSKSTVNELKRIKVEKT 123
Query: 125 VAQSCERIKKGTVRSTFTVNSTIIEMLQGKIGGQQSHPIPRWSDCDCKFCTCWSSSSRDT 184
+ QSC + KKGTVRSTFTVNSTI+EMLQGKIGGQQSHP+PRWSDCDCK CT W++ ++T
Sbjct: 124 LVQSCGKFKKGTVRSTFTVNSTIVEMLQGKIGGQQSHPVPRWSDCDCKQCTSWTTCGKET 183
Query: 185 LFVKTQGP-----------------SAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPK 227
LFVK QGP SAFWTETLFPNFS +KS+YR FA+DLLGFGRSPK
Sbjct: 184 LFVKAQGPKGKTKEDVLFIHGFISSSAFWTETLFPNFSDTAKSSYRFFAVDLLGFGRSPK 243
Query: 228 PTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPP 287
PTDSLYT+REHLDMIE+SV+EP KVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPP
Sbjct: 244 PTDSLYTLREHLDMIERSVLEPYKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPP 303
Query: 288 YYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAK 347
YYPVPKG Q +QYVMR+VAPRRVWP IAFGAS+ACWYEHI+RTICL++CKNHR+WEFL K
Sbjct: 304 YYPVPKGVQPTQYVMRRVAPRRVWPPIAFGASLACWYEHITRTICLVLCKNHRLWEFLTK 363
Query: 348 LVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGED 407
LVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGT +KLDGYLDAVR +KCDV++FHG++
Sbjct: 364 LVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTGSKLDGYLDAVRERLKCDVSIFHGQN 423
Query: 408 DELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSSSG 460
DELIPVECSY+VQ+K+PRARVKVIEKKDHITIVVGRQK FARELEEIW SSG
Sbjct: 424 DELIPVECSYSVQKKVPRARVKVIEKKDHITIVVGRQKAFARELEEIWSRSSG 476
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225426578|ref|XP_002279898.1| PREDICTED: putative aminoacrylate hydrolase RutD [Vitis vinifera] gi|297742442|emb|CBI34591.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 787 bits (2033), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/473 (80%), Positives = 423/473 (89%), Gaps = 17/473 (3%)
Query: 5 MCKTKLVLSFTGSLLNKAVSFIVFSFLDLFDFLLCMLYKVADFFIEAEWKPCYCSSAKEA 64
M KT+ VL+ TG ++N+AVSFI+FS LDL DFLLC +YKVADFFIEAEWKPCYCSSAKEA
Sbjct: 4 MGKTRSVLTLTGRVINEAVSFIIFSILDLLDFLLCFVYKVADFFIEAEWKPCYCSSAKEA 63
Query: 65 ITSSGKILVSEQGKSKIVCLTSSKLHLEEISDTLYTRPSLVSEASKQTVNELKRLKVDGN 124
ITSSGKILVSEQG+SKIVCL+SSKL LEEISDTLY RPSLVSE SK TV ELK+LK++G
Sbjct: 64 ITSSGKILVSEQGESKIVCLSSSKLQLEEISDTLYARPSLVSEVSKSTVKELKKLKMEGT 123
Query: 125 VAQSCERIKKGTVRSTFTVNSTIIEMLQGKIGGQQSHPIPRWSDCDCKFCTCWSSSSRDT 184
+ QSCE+IKKGTVRSTFTVNSTI+EMLQG+IGGQQSHPIPRWSDCDCK CT W+SS+++T
Sbjct: 124 MIQSCEKIKKGTVRSTFTVNSTIVEMLQGRIGGQQSHPIPRWSDCDCKTCTSWTSSTKET 183
Query: 185 LFVKTQGP-----------------SAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPK 227
LFV+ G SAFWTETLFPNFS++ KSTYRLFA+DLLGFGRSPK
Sbjct: 184 LFVRADGAKDKAREDVLFIHGFISSSAFWTETLFPNFSNSVKSTYRLFAVDLLGFGRSPK 243
Query: 228 PTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPP 287
PTDSLYT+REHLDMIE+SV+EP KVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPP
Sbjct: 244 PTDSLYTLREHLDMIERSVLEPYKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPP 303
Query: 288 YYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAK 347
Y+PVPKG QA+Q+V+R VAPR VWP+I+FGAS+ACWYEHISRTICLLICKNHR+WEFLAK
Sbjct: 304 YFPVPKGEQAAQHVLRMVAPRHVWPVISFGASLACWYEHISRTICLLICKNHRLWEFLAK 363
Query: 348 LVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGED 407
LVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICG A K+DGY++ VR+H+KCDVNVFHG D
Sbjct: 364 LVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGAAGKIDGYMETVRDHLKCDVNVFHGRD 423
Query: 408 DELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSSSG 460
DELIPVECSYNVQ IPRAR+KVIE KDHITIVVGRQK FAR+LEEIWR SSG
Sbjct: 424 DELIPVECSYNVQSMIPRARIKVIENKDHITIVVGRQKAFARDLEEIWRRSSG 476
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224053721|ref|XP_002297946.1| predicted protein [Populus trichocarpa] gi|222845204|gb|EEE82751.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/466 (77%), Positives = 407/466 (87%), Gaps = 21/466 (4%)
Query: 16 GSLLNKAVSFIVFSFLDLFDFLLCMLYKVADFFIEAEWKPCYCSSAKEAITSSGKILVSE 75
G +L+ AVSFIVFSFLD+ D +LC +K ADF IEAEWKPCYC+SAKEAITSSGKILVSE
Sbjct: 4 GRVLHDAVSFIVFSFLDILDLVLCFAFKAADFIIEAEWKPCYCASAKEAITSSGKILVSE 63
Query: 76 QGKSKIVCLTSSKLHLEEISDTLYTRPSLVSEASKQTVNELKRLKVDGN----VAQSCER 131
QG+SKIVCLTS+KL LEEISDTLYTR SLVSE SK TVNELKR+KV+G Q+ E+
Sbjct: 64 QGESKIVCLTSTKLRLEEISDTLYTRTSLVSEISKSTVNELKRIKVEGKSSTVTVQTSEK 123
Query: 132 IKKGTVRSTFTVNSTIIEMLQGKIGGQQSHPIPRWSDCDCKFCTCWSSSSRDTLFVKTQG 191
IKKGT+RST TV+STI+EMLQGKIGGQ HPI RWSDCDCKFCT W+SSS++TLFV+ +G
Sbjct: 124 IKKGTMRSTLTVSSTIVEMLQGKIGGQHLHPISRWSDCDCKFCTSWTSSSKETLFVRAEG 183
Query: 192 P-----------------SAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYT 234
P SAFWTETLFPNFS A+KSTYRLFAIDLLGFGRSPKP DSLYT
Sbjct: 184 PKDKGKGDVLFIHGFISSSAFWTETLFPNFSHATKSTYRLFAIDLLGFGRSPKPADSLYT 243
Query: 235 VREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKG 294
+REHLDMIE+SV+EP +VKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYY VPKG
Sbjct: 244 LREHLDMIEQSVLEPYEVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYKVPKG 303
Query: 295 AQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRI 354
+A+Q+VMR+VAPRRVWPLI FGAS+ACWYEHISR ICL+ICKNHR+WEFL KLVTRNRI
Sbjct: 304 VRATQHVMRQVAPRRVWPLITFGASIACWYEHISRAICLVICKNHRLWEFLTKLVTRNRI 363
Query: 355 RTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVE 414
+TFL+EGF CHTHNAAWHTLHNIICGT +KL+GYLD+VR+H+KCDVN+FHG+ DE+IPVE
Sbjct: 364 KTFLIEGFCCHTHNAAWHTLHNIICGTGSKLEGYLDSVRDHLKCDVNIFHGKKDEVIPVE 423
Query: 415 CSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSSSG 460
CSYNVQ K+PRARVKVI+ +DHITIVV RQK FARELEEIW+ SSG
Sbjct: 424 CSYNVQHKVPRARVKVIDDEDHITIVVNRQKAFARELEEIWKRSSG 469
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224075244|ref|XP_002304581.1| predicted protein [Populus trichocarpa] gi|222842013|gb|EEE79560.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 758 bits (1957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/471 (76%), Positives = 408/471 (86%), Gaps = 22/471 (4%)
Query: 10 LVLSFTGSLLNKAVSFIVFSFLDLFDFLLCMLYKVADFFIEAEWKPCYCSSAKEAITSSG 69
++L TG +L+ AVSFIVFS LD+FD +LC +K DF IEAEWKPCYC+SAKEAITSSG
Sbjct: 1 MILRLTGRVLHDAVSFIVFSLLDIFDLILCFAFKAVDFIIEAEWKPCYCTSAKEAITSSG 60
Query: 70 KILVSEQGKSKIVCLTSSKLHLEEISDTLYTRPSLVSEASKQTVNELKRLKVDGN----V 125
KILVSEQG+SKIVCLTS+KL LEEISDTLYTRPSLVSE SK TVNELKR KV+
Sbjct: 61 KILVSEQGESKIVCLTSTKLGLEEISDTLYTRPSLVSEISKSTVNELKRFKVEDKSSTVT 120
Query: 126 AQSCER-IKKGTVRSTFTVNSTIIEMLQGKIGGQQSHPIPRWSDCDCKFCTCWSSSSRDT 184
QS E+ IKKGT RSTFTVNSTI+ ML+GKIGGQQ +P RWSDCDCKFCT W++SS++T
Sbjct: 121 VQSSEKNIKKGTTRSTFTVNSTIVGMLRGKIGGQQLYPTSRWSDCDCKFCTSWTTSSKET 180
Query: 185 LFVKTQGP-----------------SAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPK 227
LFV+ +GP SAFWTETLFPNFS+A+KSTYRLFAIDLLGFGRSPK
Sbjct: 181 LFVRAEGPKDKAKEDVLFVHGFISSSAFWTETLFPNFSNAAKSTYRLFAIDLLGFGRSPK 240
Query: 228 PTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPP 287
P DSLYT+REHLDMIE+SV+EP KVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPP
Sbjct: 241 PADSLYTLREHLDMIEQSVLEPYKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPP 300
Query: 288 YYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAK 347
YY VPKG A+Q+VM++VAPRRVWPLI FGAS+ACWYEHI+R +CL+ICKNHR+WEFL K
Sbjct: 301 YYKVPKGVPAAQHVMKQVAPRRVWPLITFGASIACWYEHITRAVCLVICKNHRLWEFLTK 360
Query: 348 LVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGED 407
LVTRNR++TFL+EGFFCHTHNAAWHTLHNIICGT +KLDGYLD+VR+H+KCDVN+FHG++
Sbjct: 361 LVTRNRMKTFLIEGFFCHTHNAAWHTLHNIICGTGSKLDGYLDSVRDHLKCDVNIFHGKN 420
Query: 408 DELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458
DELIPVECSYNVQ+K+PRA+VKVI+ +DHITIVV RQK FARELEEIWR
Sbjct: 421 DELIPVECSYNVQQKVPRAQVKVIDNEDHITIVVNRQKVFARELEEIWRGG 471
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356533695|ref|XP_003535395.1| PREDICTED: 2-hydroxymuconic semialdehyde hydrolase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 686 bits (1769), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/487 (69%), Positives = 400/487 (82%), Gaps = 36/487 (7%)
Query: 5 MCKTKLVLSFTGSLLNKAVSFIVFSFLDLFDFLLCMLYKVADFFIEAEWKPCYCSSAKEA 64
M K + V + +G +LN+AVSF+ F LDL DFLLC ++K D ++EAE++PCYCSSAKEA
Sbjct: 4 MGKARSVAATSGRILNEAVSFVAFCVLDLVDFLLCFVFKAVDLWVEAEFRPCYCSSAKEA 63
Query: 65 ITSSGKILVSEQG-KSKIVCLTSS-KLHLEEISDTLYTRPSLVSEASKQTVNELKRLKVD 122
ITSSGKILVSEQG +SKIV L SS KL LE+ISDTLY+RPSLVSE S+ T+NELKRLK++
Sbjct: 64 ITSSGKILVSEQGGESKIVSLLSSTKLQLEDISDTLYSRPSLVSEVSRLTINELKRLKLE 123
Query: 123 GNVAQSCERIKKGTVR-STFTVNSTIIEMLQGKIGGQQSHPIPRWSDCDCKFCTCW---- 177
V QS K+G R STFTVN+TI+EMLQGKIG +HPIPRWSDCDCK CT W
Sbjct: 124 DPVLQS----KRGNSRCSTFTVNTTIVEMLQGKIGRHLTHPIPRWSDCDCKLCTSWISTP 179
Query: 178 ------SSSSRDTLFVKTQGP------------------SAFWTETLFPNFSSASKSTYR 213
+++++ TLFVK+Q P S FW+ET+FPN SSA+KS YR
Sbjct: 180 SSPHDNTTNAKATLFVKSQCPITDEGGEDVVFIHGFISSSLFWSETVFPNMSSAAKSCYR 239
Query: 214 LFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVK 273
LFA+DLLGFGRSPKP++SLYT+REHL+MIE+SV+E +KVKSFHIVAHSLGCILALALAVK
Sbjct: 240 LFAVDLLGFGRSPKPSESLYTLREHLEMIERSVLEAHKVKSFHIVAHSLGCILALALAVK 299
Query: 274 HPGSVKSLTLLAPPYYPVPKG-AQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTIC 332
HP SVKSLTLLAPP+YPVPKG QA+QYVMRKVAPRRVWP +AFGAS+ACWYEHI+R IC
Sbjct: 300 HPQSVKSLTLLAPPFYPVPKGETQATQYVMRKVAPRRVWPPMAFGASLACWYEHITRVIC 359
Query: 333 LLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAV 392
LLICKNHR+WEFLAKL+TRNR+RTFLLEGFFCHTHNAAWHTLHNIICGTA K+ YL+AV
Sbjct: 360 LLICKNHRLWEFLAKLITRNRVRTFLLEGFFCHTHNAAWHTLHNIICGTAGKIGSYLEAV 419
Query: 393 RNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELE 452
R + C V +FHG++DE+IPVECSY VQ++IPRA+V+VI+ KDHITIVVGRQK FARELE
Sbjct: 420 RENRNCKVTIFHGKNDEVIPVECSYEVQKRIPRAQVRVIDNKDHITIVVGRQKAFARELE 479
Query: 453 EIWRSSS 459
EIW +++
Sbjct: 480 EIWGTTT 486
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449452182|ref|XP_004143839.1| PREDICTED: uncharacterized protein LOC101222570 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 620 bits (1599), Expect = e-175, Method: Compositional matrix adjust.
Identities = 302/471 (64%), Positives = 361/471 (76%), Gaps = 36/471 (7%)
Query: 9 KLVLSFTGSLLNKAVSFIVFSFLDLFDFLLCMLYKVADFFIEAEWKPCYCSSAKEAITS- 67
K VL G+ N+ +S +FS LD+ D +LC LYK+ADFF E++WKPCYCSS KEAITS
Sbjct: 23 KWVLKSIGNFTNEILSIFLFSLLDIIDIVLCFLYKMADFFFESQWKPCYCSSHKEAITSC 82
Query: 68 -SGKILVSEQGKSKIVCLTSSKLHLEEISDTLYTRPSLVSEASKQTVNELKRLKVDGNVA 126
K+LVS+ V S+KL LEE+SDTLYTRPS +SE SK V V
Sbjct: 83 DGNKVLVSQNN----VLSLSTKLQLEEVSDTLYTRPSYLSEISK----------VMPFVI 128
Query: 127 QSCERIKKGTVRSTFTVNSTIIEMLQGKIGGQQSHPIPRWSDCDCKFCTCWSSSSRDTLF 186
S K TV STFTV+STI+EMLQ KI G Q+ PRWSDCDCK CT WSSS + +L+
Sbjct: 129 GSTATTAKTTVGSTFTVHSTIVEMLQDKINGGQN---PRWSDCDCKPCTRWSSSPKQSLY 185
Query: 187 VKTQG-----------------PSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPT 229
V+++G SAFWTETLFPNFS+++KS+YR A+DLLGFGRSPKP
Sbjct: 186 VRSEGLTDHPREDVLFIHGFISSSAFWTETLFPNFSASAKSSYRFLAVDLLGFGRSPKPA 245
Query: 230 DSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYY 289
DSLYT++EH+DMIE SV++ KVKSFHIVAHSLGCILALALAVKHPGS+KSLTLLAPPYY
Sbjct: 246 DSLYTLKEHVDMIEASVLDAYKVKSFHIVAHSLGCILALALAVKHPGSIKSLTLLAPPYY 305
Query: 290 PVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLV 349
PVPKG + SQYVMRKVAPRRVWP IA GAS+ACWYEHISRT+CLLICKNHR WE+L K+V
Sbjct: 306 PVPKGVEPSQYVMRKVAPRRVWPPIALGASIACWYEHISRTVCLLICKNHRFWEYLTKVV 365
Query: 350 TRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDE 409
TRNRI +FL+EGFF HTHNAAWHTLHN+ICGT K++ YLDAVR VKC +N+FHG DD+
Sbjct: 366 TRNRIESFLVEGFFAHTHNAAWHTLHNVICGTGGKIERYLDAVRERVKCHINIFHGSDDD 425
Query: 410 LIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSSSG 460
++PVECS +V+ ++P ARV +++ KDHITIV+GRQK FARELE+IW +SS
Sbjct: 426 VVPVECSQSVKARVPTARVNIVQNKDHITIVIGRQKAFARELEQIWSNSSA 476
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15233707|ref|NP_194145.1| hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] gi|2262103|gb|AAB63611.1| unknown protein [Arabidopsis thaliana] gi|5668642|emb|CAB51657.1| putative protein [Arabidopsis thaliana] gi|7269263|emb|CAB81332.1| putative protein [Arabidopsis thaliana] gi|19699292|gb|AAL91257.1| AT4g24140/T19F6_130 [Arabidopsis thaliana] gi|25090311|gb|AAN72274.1| At4g24140/T19F6_130 [Arabidopsis thaliana] gi|332659454|gb|AEE84854.1| hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust.
Identities = 306/497 (61%), Positives = 375/497 (75%), Gaps = 42/497 (8%)
Query: 4 AMCKTKLVLSFTGSLLNKAVSFIVFSFLDLFDFLLCMLYKVADFFIEAEWKPCYCSSAKE 63
A+ K K + G+ LN+AVSF+VF LD+ D LC+LYK AD+ EAEWKPCYC S KE
Sbjct: 2 AVMKIKGAATVAGTWLNEAVSFVVFCILDIVDSFLCLLYKAADYLFEAEWKPCYCLSDKE 61
Query: 64 AITSS-GKILVS-EQGKSKIVCLT-------SSKLHLEEISDTLYTRPSLVSEASKQTVN 114
IT++ GKIL+S G+SKI+ L+ SK+ LE+IS+TLYTRPSL+S+ S +VN
Sbjct: 62 PITTTRGKILLSHNNGESKILTLSPLQELGGRSKIELEDISETLYTRPSLISDISTISVN 121
Query: 115 ELKRLKV---------DGNVAQSCERIKKGTVRSTFTVNSTIIEMLQGKIGGQQ-SHPIP 164
EL + V G+ ++ + ++ +S+ TVN T++EML+GKI Q +H I
Sbjct: 122 ELNKRFVKVTRSESECSGHNEKTKNKRRRSLTKSSLTVNFTVVEMLRGKIRPQNLNHDIS 181
Query: 165 RWSDCDCKFCTCWSSSS--RDTLFVKTQGP------------------SAFWTETLFPNF 204
RWSDCDC FCT W+S+S +LFVKTQ P SAFWTET+FP+
Sbjct: 182 RWSDCDCGFCTSWASTSDKNHSLFVKTQIPNGVTAKEDVLFIHGFISSSAFWTETVFPSL 241
Query: 205 SSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGC 264
S AS ST+RLFA+DLLGFG+SPKP DSLYT+REH++MIEKSV+ VKSFHIVAHSLGC
Sbjct: 242 S-ASSSTHRLFAVDLLGFGKSPKPADSLYTLREHVEMIEKSVLHKYNVKSFHIVAHSLGC 300
Query: 265 ILALALAVKHPGSVKSLTLLAPPYYPVPKGAQA-SQYVMRKVAPRRVWPLIAFGASMACW 323
ILAL+LA +H G +KSLTLLAPPYYPVPKG + QYVM+KVAPR+VWP IA GASMACW
Sbjct: 301 ILALSLAARHGGLIKSLTLLAPPYYPVPKGEKKPRQYVMKKVAPRKVWPPIALGASMACW 360
Query: 324 YEHISRTICLLICKNHRVWEFLAKLVTRN-RIRTFLLEGFFCHTHNAAWHTLHNIICGTA 382
YEHISRTICLLICK+HRVW+F+A ++TRN R FL+EGF CHTHNAAWHTLHNIICGT
Sbjct: 361 YEHISRTICLLICKHHRVWQFIAGVLTRNNRTVNFLIEGFMCHTHNAAWHTLHNIICGTG 420
Query: 383 NKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVG 442
+KLD YLD VR+ +KC+V +FHG DDELIPVECSYNV+++IPRARVKVIE KDHIT+VVG
Sbjct: 421 SKLDTYLDIVRDKLKCNVTIFHGGDDELIPVECSYNVKQRIPRARVKVIEHKDHITMVVG 480
Query: 443 RQKTFARELEEIWRSSS 459
RQ FAREL+EIW++SS
Sbjct: 481 RQDEFARELQEIWKTSS 497
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297799590|ref|XP_002867679.1| hydrolase, alpha/beta fold family protein [Arabidopsis lyrata subsp. lyrata] gi|297313515|gb|EFH43938.1| hydrolase, alpha/beta fold family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 304/497 (61%), Positives = 374/497 (75%), Gaps = 42/497 (8%)
Query: 4 AMCKTKLVLSFTGSLLNKAVSFIVFSFLDLFDFLLCMLYKVADFFIEAEWKPCYCSSAKE 63
A+ K + + G+ LN+AVSF+VF LD+ D LC+LYK AD+ EAEWKPCYC S KE
Sbjct: 2 AVMKIRGAATVAGTWLNEAVSFVVFCVLDIVDSFLCLLYKAADYLFEAEWKPCYCLSDKE 61
Query: 64 AITSS-GKILVS-EQGKSKIVCLT-------SSKLHLEEISDTLYTRPSLVSEASKQTVN 114
IT++ GKIL+S G+SKI+ L+ SK+ LE+IS+TLYTRPSL+S+ S +VN
Sbjct: 62 PITTTRGKILLSHNNGESKILTLSPLQELGGRSKIELEDISETLYTRPSLISDLSNISVN 121
Query: 115 ELKRLKV---------DGNVAQSCERIKKGTVRSTFTVNSTIIEMLQGKIGGQQ-SHPIP 164
EL + V G+ ++ + ++ +S+ TVN T++EML+GKI Q SH I
Sbjct: 122 ELNKRFVKVTRSESECSGHHEKTKNKRRRSLTKSSLTVNFTVVEMLRGKIRPQNLSHDIS 181
Query: 165 RWSDCDCKFCTCWSSSSRD--TLFVKTQGP------------------SAFWTETLFPNF 204
RWSDCDC FCT W+S+S +LFVKTQ P SAFWTET+FP+
Sbjct: 182 RWSDCDCGFCTSWASTSDKDHSLFVKTQIPNGVTAKEDVLFIHGFISSSAFWTETVFPSL 241
Query: 205 SSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGC 264
S AS S +RLFA+DLLGFG+SPKP DSLYT+REH++MIEKSV+ + VK FHIVAHSLGC
Sbjct: 242 S-ASSSAHRLFAVDLLGFGKSPKPADSLYTLREHVEMIEKSVLHKHNVKYFHIVAHSLGC 300
Query: 265 ILALALAVKHPGSVKSLTLLAPPYYPVPKG-AQASQYVMRKVAPRRVWPLIAFGASMACW 323
ILAL+LA +H +KSLTLLAPPYYPVPKG + QYVM+KVAPR+VWP IA GASMACW
Sbjct: 301 ILALSLAARHGSLIKSLTLLAPPYYPVPKGETKPRQYVMKKVAPRKVWPPIALGASMACW 360
Query: 324 YEHISRTICLLICKNHRVWEFLAKLVTRN-RIRTFLLEGFFCHTHNAAWHTLHNIICGTA 382
YEHISRTICLLICK+HRVW+F+A+++TRN R FL+EGF CHTHNAAWHTLHNIICGT
Sbjct: 361 YEHISRTICLLICKHHRVWQFIARVLTRNNRTVNFLIEGFMCHTHNAAWHTLHNIICGTG 420
Query: 383 NKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVG 442
+KLD YLD VR+ +KC+V +FHGEDDELIPVECSYNV+ +IPRARVKVIE KDHIT+VVG
Sbjct: 421 SKLDTYLDIVRDKLKCNVTIFHGEDDELIPVECSYNVKERIPRARVKVIEHKDHITMVVG 480
Query: 443 RQKTFARELEEIWRSSS 459
RQ FAREL+EIW++SS
Sbjct: 481 RQDEFARELQEIWKTSS 497
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297852612|ref|XP_002894187.1| hypothetical protein ARALYDRAFT_474084 [Arabidopsis lyrata subsp. lyrata] gi|297340029|gb|EFH70446.1| hypothetical protein ARALYDRAFT_474084 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 278/470 (59%), Positives = 343/470 (72%), Gaps = 44/470 (9%)
Query: 19 LNKAVSFIVFSFLDLFDFLLCMLYKVADFFIEAEWKPCYCSSAKEAI------TSSGKIL 72
LN+ V F VF LD+ DFLLC YK DFF E+EWKPCYC EA + GK++
Sbjct: 7 LNRTVGFFVFFILDIVDFLLCFTYKTLDFFFESEWKPCYCCPPPEAKPIAAGGSRVGKMI 66
Query: 73 VSEQGK--SKIVCLTSSKLHLEEISDTLYTRPSLVSEASKQTVNELKRLKVDGNVAQSCE 130
VSE+ SK+V LT +K+HL+EISDTLY+RPSL++ +K +K K D V + C+
Sbjct: 67 VSERSGEYSKVVSLTRTKIHLDEISDTLYSRPSLLTRLTKL----VKCFKKD--VVKCCD 120
Query: 131 RIKK---GTVRSTFTVNSTIIEMLQGKIGGQQSHPIPRWSDCDCKFCTCWSSSSRDTLFV 187
KK T ++ TVNST++E L+ PRWSDC C FCT W SSS +LFV
Sbjct: 121 ESKKRSPSTKKTLLTVNSTVVEKLRR---------TPRWSDCHCTFCTSWLSSSNHSLFV 171
Query: 188 KTQGP------------------SAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPT 229
Q P S FWTETLFPNFS ++KS YR A+DLLG+G+SPKP
Sbjct: 172 NVQQPKDNKAQENVVFIHGFLSSSTFWTETLFPNFSDSAKSNYRFLAVDLLGYGKSPKPN 231
Query: 230 DSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYY 289
DSLYT++EHL+MIE+SVI ++K+FH+VAHSLGCILALALAVKHPG++KSLTLLAPPYY
Sbjct: 232 DSLYTLKEHLEMIERSVISQFRLKTFHLVAHSLGCILALALAVKHPGAIKSLTLLAPPYY 291
Query: 290 PVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLV 349
VPKG Q +QYVMRKVAP+ VWP +AFGAS+A WYEHISRT+ L++CKNH + EFL +L+
Sbjct: 292 SVPKGVQGTQYVMRKVAPKEVWPPMAFGASVASWYEHISRTVSLVLCKNHHLLEFLTRLL 351
Query: 350 TRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDE 409
TRNR+RT+L+EGF CHTHNA+WHTLHNII G+ +K++ YLD VR++V C+V VFHG DE
Sbjct: 352 TRNRMRTYLIEGFLCHTHNASWHTLHNIIFGSGSKVEAYLDHVRDNVDCEVTVFHGGRDE 411
Query: 410 LIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSSS 459
LIPVECSY V+RK+PRAR+ V+ KDHITIVVGRQK FARELE IWR S+
Sbjct: 412 LIPVECSYGVKRKVPRARIHVVPDKDHITIVVGRQKEFARELELIWRRST 461
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|6633825|gb|AAF19684.1|AC009519_18 F1N19.24 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 276/470 (58%), Positives = 343/470 (72%), Gaps = 44/470 (9%)
Query: 19 LNKAVSFIVFSFLDLFDFLLCMLYKVADFFIEAEWKPCYCSSAKEAITSS------GKIL 72
LN+ V VF LD+ DFLLC YK DFF E+EWKPCYC EA S GK++
Sbjct: 175 LNRTVGVFVFFILDIVDFLLCFTYKTLDFFFESEWKPCYCCPPPEAKPISAGGNRGGKMI 234
Query: 73 VSEQGK--SKIVCLTSSKLHLEEISDTLYTRPSLVSEASKQTVNELKRLKVDGNVAQSCE 130
VSE+ SK+V LT +K++L+EISDTLY+RPSL+++ +K +K K D V + C+
Sbjct: 235 VSERSGDYSKVVSLTRTKIYLDEISDTLYSRPSLLTKLTKL----VKCFKKD--VVKCCD 288
Query: 131 RIKK---GTVRSTFTVNSTIIEMLQGKIGGQQSHPIPRWSDCDCKFCTCWSSSSRDTLFV 187
KK T ++ TVNST++E LQ PRWSDC C FCT W SSS +LFV
Sbjct: 289 ESKKRSPSTKKTLLTVNSTVVEKLQRT---------PRWSDCHCTFCTSWLSSSNQSLFV 339
Query: 188 KTQGP------------------SAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPT 229
Q P S FWTETLFPNFS ++KS YR A+DLLG+G+SPKP
Sbjct: 340 NVQQPTDNKAQENVVFIHGFLSSSTFWTETLFPNFSDSAKSNYRFLAVDLLGYGKSPKPN 399
Query: 230 DSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYY 289
DSLYT++EHL+MIE+SVI ++K+FH+VAHSLGCILALALAVKHPG++KSLTLLAPPYY
Sbjct: 400 DSLYTLKEHLEMIERSVISQFRLKTFHLVAHSLGCILALALAVKHPGAIKSLTLLAPPYY 459
Query: 290 PVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLV 349
VPKG Q +QYVMR++AP+ VWP +AFGAS+A WYEHISRT+ L++CKNH + EFL +L+
Sbjct: 460 SVPKGVQGTQYVMRRLAPKEVWPPMAFGASVASWYEHISRTVSLVLCKNHHLLEFLTRLL 519
Query: 350 TRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDE 409
TRNR+RT+L+EGF CHTHNA+WHTLHNII G+ +K++ YLD VR++V C+V VFHG DE
Sbjct: 520 TRNRMRTYLIEGFLCHTHNASWHTLHNIIFGSGSKVEAYLDHVRDNVDCEVAVFHGGRDE 579
Query: 410 LIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSSS 459
LIPVECSY V+RK+PRAR+ V+ KDHITIVVGRQK FARELE IWR S+
Sbjct: 580 LIPVECSYGVKRKVPRARIHVVPDKDHITIVVGRQKEFARELELIWRRST 629
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 468 | ||||||
| TAIR|locus:2134976 | 498 | AT4G24140 [Arabidopsis thalian | 0.598 | 0.562 | 0.728 | 4e-138 | |
| TAIR|locus:2019464 | 469 | BDG1 "BODYGUARD1" [Arabidopsis | 0.886 | 0.884 | 0.569 | 9.3e-130 | |
| TAIR|locus:2153010 | 471 | AT5G41900 [Arabidopsis thalian | 0.762 | 0.757 | 0.578 | 6.5e-106 | |
| TAIR|locus:2175911 | 419 | AT5G17780 [Arabidopsis thalian | 0.572 | 0.639 | 0.455 | 1.7e-78 | |
| TAIR|locus:2175936 | 443 | AT5G17720 [Arabidopsis thalian | 0.619 | 0.654 | 0.426 | 2.7e-78 | |
| TAIR|locus:2014774 | 339 | AT1G13820 [Arabidopsis thalian | 0.277 | 0.383 | 0.313 | 6e-05 | |
| ASPGD|ASPL0000036514 | 587 | AN2777 [Emericella nidulans (t | 0.235 | 0.187 | 0.307 | 0.00019 | |
| UNIPROTKB|Q83CA3 | 302 | CBU_1225 "1,3,4,6-tetrachloro- | 0.194 | 0.301 | 0.309 | 0.00022 | |
| TIGR_CMR|CBU_1225 | 302 | CBU_1225 "hydrolase, alpha/bet | 0.194 | 0.301 | 0.309 | 0.00022 | |
| UNIPROTKB|Q5EA59 | 342 | ABHD4 "Abhydrolase domain-cont | 0.192 | 0.263 | 0.395 | 0.00037 |
| TAIR|locus:2134976 AT4G24140 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1113 (396.9 bits), Expect = 4.0e-138, Sum P(2) = 4.0e-138
Identities = 207/284 (72%), Positives = 243/284 (85%)
Query: 179 SSSRDTLFVKTQ-GPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVRE 237
++ D LF+ SAFWTET+FP+ S AS ST+RLFA+DLLGFG+SPKP DSLYT+RE
Sbjct: 215 TAKEDVLFIHGFISSSAFWTETVFPSLS-ASSSTHRLFAVDLLGFGKSPKPADSLYTLRE 273
Query: 238 HLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQA 297
H++MIEKSV+ VKSFHIVAHSLGCILAL+LA +H G +KSLTLLAPPYYPVPKG +
Sbjct: 274 HVEMIEKSVLHKYNVKSFHIVAHSLGCILALSLAARHGGLIKSLTLLAPPYYPVPKGEKK 333
Query: 298 S-QYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRN-RIR 355
QYVM+KVAPR+VWP IA GASMACWYEHISRTICLLICK+HRVW+F+A ++TRN R
Sbjct: 334 PRQYVMKKVAPRKVWPPIALGASMACWYEHISRTICLLICKHHRVWQFIAGVLTRNNRTV 393
Query: 356 TFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVEC 415
FL+EGF CHTHNAAWHTLHNIICGT +KLD YLD VR+ +KC+V +FHG DDELIPVEC
Sbjct: 394 NFLIEGFMCHTHNAAWHTLHNIICGTGSKLDTYLDIVRDKLKCNVTIFHGGDDELIPVEC 453
Query: 416 SYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSSS 459
SYNV+++IPRARVKVIE KDHIT+VVGRQ FAREL+EIW++SS
Sbjct: 454 SYNVKQRIPRARVKVIEHKDHITMVVGRQDEFARELQEIWKTSS 497
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| TAIR|locus:2019464 BDG1 "BODYGUARD1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1273 (453.2 bits), Expect = 9.3e-130, P = 9.3e-130
Identities = 251/441 (56%), Positives = 322/441 (73%)
Query: 39 CMLYKVADFFIEAEWKPCYCSSAKEA--ITSSG----KILVSEQGK--SKIVCLTSSKLH 90
C YK DFF E+EWKPCYC EA I++ G K++VSE+ SK+V LT +K++
Sbjct: 27 CFTYKTLDFFFESEWKPCYCCPPPEAKPISAGGNRGGKMIVSERSGDYSKVVSLTRTKIY 86
Query: 91 LEEISDTLYTRPSLVSEASKQTVNELKRLKVDGNVAQSCERIKK---GTVRSTFTVNSTI 147
L+EISDTLY+RPSL+++ +K +K K D V + C+ KK T ++ TVNST+
Sbjct: 87 LDEISDTLYSRPSLLTKLTKL----VKCFKKD--VVKCCDESKKRSPSTKKTLLTVNSTV 140
Query: 148 IEMLQGKIGGQQSHPI--PRW--SDCDCKFCTCW----SSSSRDTLFVKT-QGPSAFWTE 198
+E LQ H W S F + + + +F+ S FWTE
Sbjct: 141 VEKLQRTPRWSDCHCTFCTSWLSSSNQSLFVNVQQPTDNKAQENVVFIHGFLSSSTFWTE 200
Query: 199 TLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIV 258
TLFPNFS ++KS YR A+DLLG+G+SPKP DSLYT++EHL+MIE+SVI ++K+FH+V
Sbjct: 201 TLFPNFSDSAKSNYRFLAVDLLGYGKSPKPNDSLYTLKEHLEMIERSVISQFRLKTFHLV 260
Query: 259 AHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGA 318
AHSLGCILALALAVKHPG++KSLTLLAPPYY VPKG Q +QYVMR++AP+ VWP +AFGA
Sbjct: 261 AHSLGCILALALAVKHPGAIKSLTLLAPPYYSVPKGVQGTQYVMRRLAPKEVWPPMAFGA 320
Query: 319 SMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNII 378
S+A WYEHISRT+ L++CKNH + EFL +L+TRNR+RT+L+EGF CHTHNA+WHTLHNII
Sbjct: 321 SVASWYEHISRTVSLVLCKNHHLLEFLTRLLTRNRMRTYLIEGFLCHTHNASWHTLHNII 380
Query: 379 CGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHIT 438
G+ +K++ YLD VR++V C+V VFHG DELIPVECSY V+RK+PRAR+ V+ KDHIT
Sbjct: 381 FGSGSKVEAYLDHVRDNVDCEVAVFHGGRDELIPVECSYGVKRKVPRARIHVVPDKDHIT 440
Query: 439 IVVGRQKTFARELEEIWRSSS 459
IVVGRQK FARELE IWR S+
Sbjct: 441 IVVGRQKEFARELELIWRRST 461
|
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| TAIR|locus:2153010 AT5G41900 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1048 (374.0 bits), Expect = 6.5e-106, P = 6.5e-106
Identities = 218/377 (57%), Positives = 268/377 (71%)
Query: 97 TLYTRPSLVSEASKQTVNELKRLKVDGNVAQSCE------RIKKGTVRSTFTVNSTIIEM 150
+L TR S + + K N K L + GNV +SC+ +I KG R T+NST+IE
Sbjct: 93 SLLTRLSKLVRSVK-CFN-YKGLIMRGNVVESCDHHESKKKISKGKKR-LMTLNSTVIEK 149
Query: 151 LQGKIGGQQSHP--IPRW---SDCDCKFCTCW----SSSSRDTL-FVKT-QGPSAFWTET 199
H W ++ D F + +RD + F+ SAFWTET
Sbjct: 150 SSTAPRWSDCHCSFCTSWLTSTNRDSLFVKVQQPKDNKKARDNVVFIHGFVSSSAFWTET 209
Query: 200 LFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVA 259
LFPNFS ++KS YR A+DLLG+GRSPKP DSLYT+REHL+MIEKSVI K+K+FHIVA
Sbjct: 210 LFPNFSDSAKSNYRFIAVDLLGYGRSPKPNDSLYTLREHLEMIEKSVISKFKLKTFHIVA 269
Query: 260 HSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGAS 319
HSLGCILALALAVKHPG++KSLTLLAPPYY VPKG Q +QYVMR+VA + VWP + FGAS
Sbjct: 270 HSLGCILALALAVKHPGAIKSLTLLAPPYYKVPKGVQPAQYVMREVARKEVWPPMQFGAS 329
Query: 320 MACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIIC 379
+ WYEH+ RTI L++ KNH++ EF+ +L+T NR+RT+L+EGF CHTHN ++HTLHNII
Sbjct: 330 VLSWYEHLGRTIGLVLIKNHQLIEFVTRLLTLNRMRTYLIEGFLCHTHNGSFHTLHNIIF 389
Query: 380 GTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITI 439
G+ KLD YLD VR+HV CDV +FHG DELIPVECSY+V+ K+PRA V VI KDHITI
Sbjct: 390 GSGAKLDSYLDHVRDHVDCDVAIFHGGKDELIPVECSYSVKSKVPRATVHVIPDKDHITI 449
Query: 440 VVGRQKTFARELEEIWR 456
VVGRQK FARELE IW+
Sbjct: 450 VVGRQKDFARELELIWQ 466
|
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| TAIR|locus:2175911 AT5G17780 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 693 (249.0 bits), Expect = 1.7e-78, Sum P(3) = 1.7e-78
Identities = 127/279 (45%), Positives = 191/279 (68%)
Query: 181 SRDTLFVKT-QGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHL 239
S + +F+ G S FWTET+F + K YRL AIDLLGFG SPKP DSLYT+++H+
Sbjct: 149 SENVIFIHGFMGSSHFWTETVFEHIQ---KDDYRLLAIDLLGFGESPKPRDSLYTLKDHV 205
Query: 240 DMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQ 299
D IE+SVI+P ++ SFH+VAHS+GC++ALALA KH VKS+TL+APPY+P + S
Sbjct: 206 DTIERSVIKPYQLDSFHVVAHSMGCLIALALAAKHSNIVKSVTLVAPPYFP--SSVEGS- 262
Query: 300 YVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLL 359
V+ ++A +R+WP +AFG ++ WYEHI R +C +ICK+H++WE+L KL R + +
Sbjct: 263 -VLNRIARKRLWPPLAFGTAVMSWYEHIGRCVCFIICKHHKIWEWLIKLCIGKREIHWKI 321
Query: 360 EGFFCHTHNAAWHTLHNIICGTANKLDGYLDA-VRNHVKCDVNVFHGEDDELIPVECSYN 418
+ HTH++AWH++HN+ICG + D +L+ +++ VK +++ G+ D+++P CS N
Sbjct: 322 KDITRHTHHSAWHSMHNVICGGSKVADEHLETLIKSGVK--IHLMQGDCDQIVPSHCSGN 379
Query: 419 VQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457
++R P V +I DH +++ GR + FA +LE IW S
Sbjct: 380 MKRTFPAVEVDIITGADHDSMISGRGEEFAEKLESIWCS 418
|
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| TAIR|locus:2175936 AT5G17720 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 695 (249.7 bits), Expect = 2.7e-78, Sum P(3) = 2.7e-78
Identities = 136/319 (42%), Positives = 200/319 (62%)
Query: 165 RWSDCDCKFCTCWSSSSRDTLFVK---------TQGP-------------SAFWTETLFP 202
RWSDC CK C W ++ + + VK + P S+FWT T+F
Sbjct: 123 RWSDCGCKTCVSWINTDKLNVIVKQPSISDLSISNKPVENVIFVHGFLASSSFWTNTVFK 182
Query: 203 NFSSASKST-YRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHS 261
++ T YR FAIDLLGFG SPKP S Y+++EH++MIEKSVI PN + SFH+VAHS
Sbjct: 183 YLPETTEGTNYRFFAIDLLGFGDSPKPRASQYSLKEHVEMIEKSVILPNNLTSFHVVAHS 242
Query: 262 LGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMA 321
+GCI+ +ALA K SVKS+ L+APPY+ KG AS + VA +++WP +F +M
Sbjct: 243 MGCIIGIALAAKFSDSVKSVALVAPPYFADSKGG-ASCAALDVVAKKKLWPPASFFTAMM 301
Query: 322 CWYEHISRTICLLICKNHRVWEFLAKLVT-RNRIRTFLLEGFFCHTHNAAWHTLHNIICG 380
CWYEHI R +CL+ C++HR WE + K+VT R ++ T +++ F HTH + WH++HN+ICG
Sbjct: 302 CWYEHIGRGVCLVFCRHHRTWERIIKIVTWRRKLPTAIMD-FTKHTHQSGWHSMHNVICG 360
Query: 381 TANKLDGYLDA-VRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITI 439
A D +L+ +++ VK +NV G+ D ++P++C N++ K P V+VI DH T+
Sbjct: 361 GAKFTDKHLETLIKSGVK--INVMQGDKDVVVPIDCLSNMKGKFPAVEVEVIAGTDHSTV 418
Query: 440 VVGRQKTFARELEEIWRSS 458
++ R++ FA L +W +S
Sbjct: 419 IMSRREVFAANLVSLWATS 437
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| TAIR|locus:2014774 AT1G13820 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 109 (43.4 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 48/153 (31%), Positives = 69/153 (45%)
Query: 196 WTETLFPNFSSASKSTYRLFAIDLLGFGRSPK---PTDSLYTVREHLDMIEKSVIEPNKV 252
W T +P A T+ A D+LG+G S P + + REH KS I+ V
Sbjct: 98 WRYT-YPLLEEAGLETW---AFDILGWGFSDLDKLPPCDVASKREHFYKFWKSHIKRPVV 153
Query: 253 KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYP--------VPKGAQ-ASQYVMR 303
+V SLG +A+ +AV HP +V+SL L+ Y +PK A A Y+++
Sbjct: 154 ----LVGPSLGAAVAIDIAVNHPEAVESLVLMDASVYAEGTGNLATLPKAAAYAGVYLLK 209
Query: 304 KVAPRRVWPLIAF-GASM-ACW-YEHISRTICL 333
+ R I F G S+ W + I R CL
Sbjct: 210 SIPLRLYVNFICFNGISLETSWDWTKIGRLHCL 242
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| ASPGD|ASPL0000036514 AN2777 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 124 (48.7 bits), Expect = 0.00019, P = 0.00019
Identities = 36/117 (30%), Positives = 60/117 (51%)
Query: 185 LFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHL-DMIE 243
+F+ G S+ + L S+ T+ L DL G G SP S T+ D+ +
Sbjct: 344 IFIHGLGGSSSYFTPLLDKLSA----THALHLTDLEGHGLSPTSALSSLTISSFAGDIRD 399
Query: 244 KSVIEP-NKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPK-GAQAS 298
++ + K ++AHS+GC++AL LA+++ V +L LL PP P+P+ G+ S
Sbjct: 400 VYILAAGSNPKPATVIAHSMGCLIALKLALENLNLVSNLVLLGPPPSPLPEAGSNGS 456
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| UNIPROTKB|Q83CA3 CBU_1225 "1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase" [Coxiella burnetii RSA 493 (taxid:227377)] | Back alignment and assigned GO terms |
|---|
Score = 119 (46.9 bits), Expect = 0.00022, P = 0.00022
Identities = 30/97 (30%), Positives = 50/97 (51%)
Query: 185 LFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEK 244
LF+ S++ + P A K+ A+DL+G G S KP D YTV +H+ +E
Sbjct: 37 LFIHGMPTSSYLWRNIIPKL--ADKA--HCVALDLIGMGESDKP-DIDYTVNDHISYVE- 90
Query: 245 SVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSL 281
IE +++ +V H G ++ A +HP ++K+L
Sbjct: 91 CFIEALGLRNITLVMHGWGSVIGFDYARRHPKNIKAL 127
|
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| TIGR_CMR|CBU_1225 CBU_1225 "hydrolase, alpha/beta hydrolase fold family" [Coxiella burnetii RSA 493 (taxid:227377)] | Back alignment and assigned GO terms |
|---|
Score = 119 (46.9 bits), Expect = 0.00022, P = 0.00022
Identities = 30/97 (30%), Positives = 50/97 (51%)
Query: 185 LFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEK 244
LF+ S++ + P A K+ A+DL+G G S KP D YTV +H+ +E
Sbjct: 37 LFIHGMPTSSYLWRNIIPKL--ADKA--HCVALDLIGMGESDKP-DIDYTVNDHISYVE- 90
Query: 245 SVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSL 281
IE +++ +V H G ++ A +HP ++K+L
Sbjct: 91 CFIEALGLRNITLVMHGWGSVIGFDYARRHPKNIKAL 127
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| UNIPROTKB|Q5EA59 ABHD4 "Abhydrolase domain-containing protein 4" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 118 (46.6 bits), Expect = 0.00037, P = 0.00037
Identities = 38/96 (39%), Positives = 52/96 (54%)
Query: 208 SKSTYR-LFAIDLLGFGRSPKPT---DSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLG 263
S ST R L DLLGFGRS +PT D E + IE + E + S ++ HSLG
Sbjct: 90 SLSTRRTLHTFDLLGFGRSSRPTFPRDPEGAEDEFVTSIE-TWRESMGIPSMILLGHSLG 148
Query: 264 CILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQ 299
LA + ++K+P VK L L+ P +P+ + A SQ
Sbjct: 149 GFLATSYSIKYPDRVKHLILVDPWGFPL-RPADPSQ 183
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | estExt_fgenesh4_pm.C_LG_I0267 | hypothetical protein (469 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 468 | |||
| PLN03087 | 481 | PLN03087, PLN03087, BODYGUARD 1 domain containing | 0.0 | |
| pfam00561 | 226 | pfam00561, Abhydrolase_1, alpha/beta hydrolase fol | 3e-20 | |
| COG0596 | 282 | COG0596, MhpC, Predicted hydrolases or acyltransfe | 4e-20 | |
| pfam12697 | 187 | pfam12697, Abhydrolase_6, Alpha/beta hydrolase fam | 3e-17 | |
| COG2267 | 298 | COG2267, PldB, Lysophospholipase [Lipid metabolism | 2e-09 | |
| PRK14875 | 371 | PRK14875, PRK14875, acetoin dehydrogenase E2 subun | 9e-09 | |
| PRK03592 | 295 | PRK03592, PRK03592, haloalkane dehalogenase; Provi | 9e-07 | |
| PLN02894 | 402 | PLN02894, PLN02894, hydrolase, alpha/beta fold fam | 1e-06 | |
| TIGR03695 | 252 | TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cy | 1e-06 | |
| PRK00870 | 302 | PRK00870, PRK00870, haloalkane dehalogenase; Provi | 3e-06 | |
| TIGR03611 | 248 | TIGR03611, RutD, pyrimidine utilization protein D | 2e-05 | |
| PLN02824 | 294 | PLN02824, PLN02824, hydrolase, alpha/beta fold fam | 3e-05 | |
| pfam12695 | 145 | pfam12695, Abhydrolase_5, Alpha/beta hydrolase fam | 2e-04 | |
| pfam06821 | 171 | pfam06821, Ser_hydrolase, Serine hydrolase | 2e-04 | |
| PLN02578 | 354 | PLN02578, PLN02578, hydrolase | 4e-04 | |
| TIGR01250 | 289 | TIGR01250, pro_imino_pep_2, proline-specific pepti | 4e-04 | |
| PLN02679 | 360 | PLN02679, PLN02679, hydrolase, alpha/beta fold fam | 7e-04 | |
| TIGR02427 | 251 | TIGR02427, protocat_pcaD, 3-oxoadipate enol-lacton | 0.002 | |
| PLN03084 | 383 | PLN03084, PLN03084, alpha/beta hydrolase fold prot | 0.003 |
| >gnl|CDD|215567 PLN03087, PLN03087, BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Score = 874 bits (2260), Expect = 0.0
Identities = 358/480 (74%), Positives = 406/480 (84%), Gaps = 23/480 (4%)
Query: 4 AMCKTKLVLSFTGSLLNKAVSFIVFSFLDLFDFLLCMLYKVADFFIEAEWKPCYCSSAKE 63
A K + L G LN+AVSF+VFS LD+ DFLLC +YKVAD+F EAEWKPCYCSSAKE
Sbjct: 2 AAAKARSALMGAGRALNEAVSFVVFSLLDILDFLLCFVYKVADYFFEAEWKPCYCSSAKE 61
Query: 64 AITSSGKILVSEQGK-SKIVCLTSSKLHLEEISDTLYTRPSLVSEASKQTVNELKRLKVD 122
AI +SGKILVSE+G SK+V L+S+KLHLEEISDTLYTRPSL+S+ASK TVNELK+LK++
Sbjct: 62 AIAASGKILVSERGGESKVVSLSSTKLHLEEISDTLYTRPSLLSDASKLTVNELKKLKME 121
Query: 123 GNVA----QSCERIKKGTVRSTFTVNSTIIEMLQGKIGGQQSHPIPRWSDCDCKFCTCWS 178
G ++ + K+GT +ST TVNSTI+EML+GKIGGQQ HP PRWSDCDCKFCT W
Sbjct: 122 GKCVGSCEKTSNKRKRGTKKSTLTVNSTIVEMLRGKIGGQQLHPAPRWSDCDCKFCTSWL 181
Query: 179 SSSRDTLFVKTQGP------------------SAFWTETLFPNFSSASKSTYRLFAIDLL 220
SSS ++LFV Q P SAFWTETLFPNFS A+KSTYRLFA+DLL
Sbjct: 182 SSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLL 241
Query: 221 GFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKS 280
GFGRSPKP DSLYT+REHL+MIE+SV+E KVKSFHIVAHSLGCILALALAVKHPG+VKS
Sbjct: 242 GFGRSPKPADSLYTLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKS 301
Query: 281 LTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKNHR 340
LTLLAPPYYPVPKG QA+QYVMRKVAPRRVWP IAFGAS+ACWYEHISRTICL+ICKNHR
Sbjct: 302 LTLLAPPYYPVPKGVQATQYVMRKVAPRRVWPPIAFGASVACWYEHISRTICLVICKNHR 361
Query: 341 VWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDV 400
+WEFL +L+TRNR+RTFL+EGFFCHTHNAAWHTLHNIICG+ +KLDGYLD VR+ +KCDV
Sbjct: 362 LWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDHVRDQLKCDV 421
Query: 401 NVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSSSG 460
+FHG DDELIPVECSY V+ K+PRARVKVI+ KDHITIVVGRQK FARELEEIWR SSG
Sbjct: 422 AIFHGGDDELIPVECSYAVKAKVPRARVKVIDDKDHITIVVGRQKEFARELEEIWRRSSG 481
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Length = 481 |
| >gnl|CDD|201306 pfam00561, Abhydrolase_1, alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Score = 88.7 bits (220), Expect = 3e-20
Identities = 44/233 (18%), Positives = 84/233 (36%), Gaps = 27/233 (11%)
Query: 212 YRLFAIDLLGFGRSPKP-TDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALAL 270
+ + A DL GFGRS P + Y + + +E +++ + ++V HS+G ++ALA
Sbjct: 1 FDVIAFDLRGFGRSSPPKDFADYRFDDLAEDLEA-LLDALGLDKVNLVGHSMGGLIALAY 59
Query: 271 AVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRT 330
A K+P VK+L L+ + + P + +
Sbjct: 60 AAKYPDRVKALVLVGTVH-----------PAGLS---SPLTPRGNLLGLLLDNF---FNR 102
Query: 331 ICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYL- 389
+ + + + R + FL + + + G GY
Sbjct: 103 LYDSVEALLGRAIKQFQALGRPFVSDFLKQFELS---SLIRFGETLALDGLLGYALGYDL 159
Query: 390 ----DAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHIT 438
A + + G+DD L+P + S + P A++ VI+ H+
Sbjct: 160 VWDRSAALKDIDVPTLIIWGDDDPLVPPDASEKLAALFPNAQLVVIDDAGHLA 212
|
This catalytic domain is found in a very wide range of enzymes. Length = 226 |
| >gnl|CDD|223669 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 89.7 bits (221), Expect = 4e-20
Identities = 57/248 (22%), Positives = 87/248 (35%), Gaps = 17/248 (6%)
Query: 212 YRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALA 271
YR+ A DL G GRS SL + L +++ ++ +V HS+G +ALALA
Sbjct: 51 YRVIAPDLRGHGRSDPAGYSLSAYADDLAA----LLDALGLEKVVLVGHSMGGAVALALA 106
Query: 272 VKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTI 331
++HP V+ L L+ P P A Q AP + G A + +
Sbjct: 107 LRHPDRVRGLVLIGPAPPPGLLEAALRQPAGA--APLAALADLLLGLDAAAFAALL---- 160
Query: 332 CLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDA 391
+ LA A ++ LD L A
Sbjct: 161 -----AALGLLAALAAAARAGLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRA 215
Query: 392 VRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPR-ARVKVIEKKDHITIVVGRQKTFARE 450
+ + HGEDD ++P E + + +P AR+ VI H + + FA
Sbjct: 216 ALARITVPTLIIHGEDDPVVPAELARRLAAALPNDARLVVIPGAGHFPH-LEAPEAFAAA 274
Query: 451 LEEIWRSS 458
L
Sbjct: 275 LLAFLERL 282
|
Length = 282 |
| >gnl|CDD|221720 pfam12697, Abhydrolase_6, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 79.0 bits (195), Expect = 3e-17
Identities = 29/151 (19%), Positives = 62/151 (41%), Gaps = 11/151 (7%)
Query: 212 YRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALA 271
YR+ A DL G G S P + Y++ + + ++++ + +V HSLG +ALA A
Sbjct: 25 YRVLAPDLPGHGDSDGPPRTPYSLEDDAADLA-ALLDALGLGPVVLVGHSLGGAVALAAA 83
Query: 272 VKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTI 331
+ P V L L++PP + + A + + + A + ++ +
Sbjct: 84 ARRPERVAGLVLISPPLRDLEELLAADAAALLALLRAALLD-----ADLREALARLTVPV 138
Query: 332 CLLICKNHRVW-----EFLAKLVTRNRIRTF 357
++ ++ + LA+ + +
Sbjct: 139 LVIHGEDDPLVPPEAARRLAEALPGAELVVL 169
|
This family contains alpha/beta hydrolase enzymes of diverse specificity. Length = 187 |
| >gnl|CDD|225176 COG2267, PldB, Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 58.5 bits (142), Expect = 2e-09
Identities = 41/240 (17%), Positives = 79/240 (32%), Gaps = 46/240 (19%)
Query: 212 YRLFAIDLLGFGRSPK----PTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILA 267
+ ++A+DL G GRSP+ DS + LD +++ EP+ ++ HS+G ++A
Sbjct: 62 FDVYALDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIA 121
Query: 268 LALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHI 327
L ++P + L L +P + + R+ P + +++
Sbjct: 122 LLYLARYPPRIDGLVLSSPALGLGGAILRLILARLALKLLGRIRPKLPVDSNLL------ 175
Query: 328 SRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGF-FCHTHNAAWHTLHNIICGTANKLD 386
L ++R+ E + +
Sbjct: 176 --------------EGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVP-- 219
Query: 387 GYLDAVRNHVKCDVNV--FHGEDDELIPVECSYNVQR--------KIPRARVKVIEKKDH 436
A+R+ + V G DD ++ NV+ P +KVI H
Sbjct: 220 ----ALRDAPAIALPVLLLQGGDDRVVD-----NVEGLARFFERAGSPDKELKVIPGAYH 270
|
Length = 298 |
| >gnl|CDD|184875 PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 56.9 bits (138), Expect = 9e-09
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 212 YRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIE---PNKVKSFHIVAHSLGCILAL 268
+ A+DL G G S K LD + +V+ ++ H+V HS+G +AL
Sbjct: 158 RPVIALDLPGHGASSKAVG-----AGSLDELAAAVLAFLDALGIERAHLVGHSMGGAVAL 212
Query: 269 ALAVKHPGSVKSLTLLAP 286
LA + P V SLTL+AP
Sbjct: 213 RLAARAPQRVASLTLIAP 230
|
Length = 371 |
| >gnl|CDD|235135 PRK03592, PRK03592, haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Score = 50.0 bits (120), Expect = 9e-07
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 213 RLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAV 272
R A DL+G G S KP D YT +H ++ + + +V H G L A
Sbjct: 55 RCLAPDLIGMGASDKP-DIDYTFADHARYLDA-WFDALGLDDVVLVGHDWGSALGFDWAA 112
Query: 273 KHPGSVKSLTLLAPPYYPVP 292
+HP V+ + + P+
Sbjct: 113 RHPDRVRGIAFMEAIVRPMT 132
|
Length = 295 |
| >gnl|CDD|215484 PLN02894, PLN02894, hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Score = 50.3 bits (120), Expect = 1e-06
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 201 FPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKS---FHI 257
F NF + + S +R+ AID LG+G S +P + + E S E K K+ F +
Sbjct: 122 FRNFDALA-SRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFIL 180
Query: 258 VAHSLGCILALALAVKHPGSVKSLTLLAPPYYPV 291
+ HS G +A A+KHP V+ L L+ P +
Sbjct: 181 LGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSS 214
|
Length = 402 |
| >gnl|CDD|234315 TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Score = 49.1 bits (118), Expect = 1e-06
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 209 KSTYRLFAIDLLGFGRSPKPTDS-LYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILA 267
+R AIDL G G S P+D Y E ++ ++++ ++ F +V +S+G +A
Sbjct: 26 GPHFRCLAIDLPGHGSSQSPSDIERYDFEEIAQLLLATLLDQLGIEPFFLVGYSMGGRIA 85
Query: 268 LALAVKHPGSVKSLTL 283
L A+++P V+ L L
Sbjct: 86 LYYALQYPERVQGLIL 101
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]. Length = 252 |
| >gnl|CDD|179147 PRK00870, PRK00870, haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Score = 48.8 bits (117), Expect = 3e-06
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 212 YRLFAIDLLGFGRSPKPTD-SLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALAL 270
+R+ A DL+GFGRS KPT YT H++ + +S E + +V G ++ L L
Sbjct: 74 HRVIAPDLIGFGRSDKPTRREDYTYARHVEWM-RSWFEQLDLTDVTLVCQDWGGLIGLRL 132
Query: 271 AVKHP 275
A +HP
Sbjct: 133 AAEHP 137
|
Length = 302 |
| >gnl|CDD|211851 TIGR03611, RutD, pyrimidine utilization protein D | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 2e-05
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 191 GPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPN 250
G ++W L + + + D G GRSP Y++ D + + +
Sbjct: 23 GSGSYWAPQL-----AVLTQRFHVVTYDHRGTGRSPGELPPDYSIAHMADDVLQLLDALG 77
Query: 251 KVKSFHIVAHSLGCILALALAVKHPGSVKSLTLL 284
+ FH V H+LG ++ L LA+ +P + SL L+
Sbjct: 78 IER-FHFVGHALGGLIGLQLALDYPERLTSLVLI 110
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. Length = 248 |
| >gnl|CDD|178419 PLN02824, PLN02824, hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 3e-05
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 15/84 (17%)
Query: 211 TYRLFAIDLLGFGRSPKPT------DSLYTV----REHLDMIEKSVIEPNKVKSFHIVAH 260
++R++AIDLLG+G S KP +S YT + D V +P +F ++ +
Sbjct: 55 SHRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVVGDP----AF-VICN 109
Query: 261 SLGCILALALAVKHPGSVKSLTLL 284
S+G ++ L AV P V+ + L+
Sbjct: 110 SVGGVVGLQAAVDAPELVRGVMLI 133
|
Length = 294 |
| >gnl|CDD|221718 pfam12695, Abhydrolase_5, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 2e-04
Identities = 20/89 (22%), Positives = 35/89 (39%), Gaps = 10/89 (11%)
Query: 212 YRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALA 271
Y + A+D G G S D+ ++ + ++P ++ +V HSLG +AL LA
Sbjct: 27 YNVVAVDYPGHGASLGAPDAE-------AVLADAPLDPERI---VLVGHSLGGGVALLLA 76
Query: 272 VKHPGSVKSLTLLAPPYYPVPKGAQASQY 300
+ P ++ L A
Sbjct: 77 ARDPRVKAAVVLAAGDPPDALDDLAKLTV 105
|
This family contains a diverse range of alpha/beta hydrolase enzymes. Length = 145 |
| >gnl|CDD|219190 pfam06821, Ser_hydrolase, Serine hydrolase | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 2e-04
Identities = 15/63 (23%), Positives = 23/63 (36%), Gaps = 10/63 (15%)
Query: 226 PKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCIL-ALALAVKHPGSVKSLTLL 284
P D + + + V+ +VAHSLGC+ A + V L+
Sbjct: 37 PVLDDWVAALSAAVAAAPGPVV---------LVAHSLGCLAVAHWAEPQLRAKVAGALLV 87
Query: 285 APP 287
AP
Sbjct: 88 APA 90
|
Members of this family have serine hydrolase activity. They contain a conserved serine hydrolase motif, GXSXG/A, where the serine is a putative nucleophile. This family has an alpha-beta hydrolase fold. Eukaryotic members of this family have a conserved LXCXE motif, which binds to retinoblastomas. This motif is absent from prokaryotic members of this family. Length = 171 |
| >gnl|CDD|215315 PLN02578, PLN02578, hydrolase | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 4e-04
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 211 TYRLFAIDLLGFGRSPKPT---DSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILA 267
Y+++A+DLLGFG S K D++ + D +++ V EP +V +SLG A
Sbjct: 112 KYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEVVKEPAV-----LVGNSLGGFTA 166
Query: 268 LALAVKHPGSVKSLTLLAP 286
L+ AV +P V + LL
Sbjct: 167 LSTAVGYPELVAGVALLNS 185
|
Length = 354 |
| >gnl|CDD|188121 TIGR01250, pro_imino_pep_2, proline-specific peptidase, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 4e-04
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 218 DLLGFGRSPKPTDS---LYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKH 274
D LG G S +P DS L+T+ +D +E V E + F+++ HS G +LA A+K+
Sbjct: 60 DQLGCGYSDQPDDSDEELWTIDYFVDELE-EVREKLGLDKFYLLGHSWGGMLAQEYALKY 118
Query: 275 PGSVKSLTL 283
+K L +
Sbjct: 119 GQHLKGLII 127
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase. Length = 289 |
| >gnl|CDD|178283 PLN02679, PLN02679, hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 7e-04
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 19/91 (20%)
Query: 203 NFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREH----LDMIEKSVIEP-----NKVK 253
N +K+ Y ++AIDLLGFG S KP YT+ LD +E+ V +P N V
Sbjct: 107 NIGVLAKN-YTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEVVQKPTVLIGNSVG 165
Query: 254 SFHIVAHSLGCILALALAVKHPGSVKSLTLL 284
SL C++A + + V+ L LL
Sbjct: 166 -------SLACVIAASES--TRDLVRGLVLL 187
|
Length = 360 |
| >gnl|CDD|131480 TIGR02427, protocat_pcaD, 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.002
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 212 YRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALA 271
+R+ D G G S P + Y++ + D + ++++ ++ SLG ++A LA
Sbjct: 40 FRVLRYDKRGHGLSDAP-EGPYSIEDLADDVL-ALLDHLGIERAVFCGLSLGGLIAQGLA 97
Query: 272 VKHPGSVKSLTLLA 285
+ P V++L L
Sbjct: 98 ARRPDRVRALVLSN 111
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate [Energy metabolism, Other]. Length = 251 |
| >gnl|CDD|178633 PLN03084, PLN03084, alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 0.003
Identities = 35/137 (25%), Positives = 54/137 (39%), Gaps = 17/137 (12%)
Query: 156 GGQQSHPIPRWSDCDCKFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLF 215
Q S + RW FC S++ + + PS ++ + Y
Sbjct: 107 QSQASSDLFRW------FCVESGSNNNPPVLLIHGFPSQAYS---YRKVLPVLSKNYHAI 157
Query: 216 AIDLLGFGRSPKPTDSL---YTVREHLDMIEKSV--IEPNKVKSFHIVAHSLGCILALAL 270
A D LGFG S KP YT+ E++ +E + ++ +KV +V +
Sbjct: 158 AFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDELKSDKVS---LVVQGYFSPPVVKY 214
Query: 271 AVKHPGSVKSLTLLAPP 287
A HP +K L LL PP
Sbjct: 215 ASAHPDKIKKLILLNPP 231
|
Length = 383 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 468 | |||
| PLN03087 | 481 | BODYGUARD 1 domain containing hydrolase; Provision | 100.0 | |
| PLN02824 | 294 | hydrolase, alpha/beta fold family protein | 99.98 | |
| PLN02679 | 360 | hydrolase, alpha/beta fold family protein | 99.97 | |
| PRK03592 | 295 | haloalkane dehalogenase; Provisional | 99.97 | |
| KOG1454 | 326 | consensus Predicted hydrolase/acyltransferase (alp | 99.97 | |
| TIGR02240 | 276 | PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer | 99.97 | |
| PRK00870 | 302 | haloalkane dehalogenase; Provisional | 99.97 | |
| PRK03204 | 286 | haloalkane dehalogenase; Provisional | 99.96 | |
| TIGR03343 | 282 | biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die | 99.96 | |
| PLN02965 | 255 | Probable pheophorbidase | 99.96 | |
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 99.96 | |
| PRK06489 | 360 | hypothetical protein; Provisional | 99.96 | |
| PRK10673 | 255 | acyl-CoA esterase; Provisional | 99.96 | |
| KOG4178 | 322 | consensus Soluble epoxide hydrolase [Lipid transpo | 99.96 | |
| PLN02578 | 354 | hydrolase | 99.96 | |
| TIGR03056 | 278 | bchO_mg_che_rel putative magnesium chelatase acces | 99.96 | |
| TIGR03611 | 257 | RutD pyrimidine utilization protein D. This protei | 99.96 | |
| PRK07581 | 339 | hypothetical protein; Validated | 99.96 | |
| PLN02385 | 349 | hydrolase; alpha/beta fold family protein | 99.96 | |
| PLN03084 | 383 | alpha/beta hydrolase fold protein; Provisional | 99.96 | |
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 99.95 | |
| TIGR01392 | 351 | homoserO_Ac_trn homoserine O-acetyltransferase. Th | 99.95 | |
| PHA02857 | 276 | monoglyceride lipase; Provisional | 99.95 | |
| TIGR02427 | 251 | protocat_pcaD 3-oxoadipate enol-lactonase. Members | 99.95 | |
| KOG4409 | 365 | consensus Predicted hydrolase/acyltransferase (alp | 99.95 | |
| PRK11126 | 242 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl | 99.95 | |
| TIGR01738 | 245 | bioH putative pimeloyl-BioC--CoA transferase BioH. | 99.95 | |
| PF12697 | 228 | Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3 | 99.95 | |
| PRK00175 | 379 | metX homoserine O-acetyltransferase; Provisional | 99.95 | |
| PLN02298 | 330 | hydrolase, alpha/beta fold family protein | 99.94 | |
| PRK10749 | 330 | lysophospholipase L2; Provisional | 99.94 | |
| TIGR01250 | 288 | pro_imino_pep_2 proline-specific peptidases, Bacil | 99.94 | |
| TIGR03695 | 251 | menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene | 99.94 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 99.94 | |
| PLN02894 | 402 | hydrolase, alpha/beta fold family protein | 99.93 | |
| TIGR01249 | 306 | pro_imino_pep_1 proline iminopeptidase, Neisseria- | 99.93 | |
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 99.93 | |
| PLN02652 | 395 | hydrolase; alpha/beta fold family protein | 99.92 | |
| COG2267 | 298 | PldB Lysophospholipase [Lipid metabolism] | 99.92 | |
| KOG1455 | 313 | consensus Lysophospholipase [Lipid transport and m | 99.92 | |
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 99.91 | |
| PRK06765 | 389 | homoserine O-acetyltransferase; Provisional | 99.91 | |
| KOG2984 | 277 | consensus Predicted hydrolase [General function pr | 99.9 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.9 | |
| PLN02511 | 388 | hydrolase | 99.9 | |
| COG1647 | 243 | Esterase/lipase [General function prediction only] | 99.89 | |
| PF00561 | 230 | Abhydrolase_1: alpha/beta hydrolase fold A web pag | 99.89 | |
| TIGR01607 | 332 | PST-A Plasmodium subtelomeric family (PST-A). Thes | 99.89 | |
| KOG2382 | 315 | consensus Predicted alpha/beta hydrolase [General | 99.87 | |
| PRK10985 | 324 | putative hydrolase; Provisional | 99.86 | |
| TIGR03100 | 274 | hydr1_PEP hydrolase, ortholog 1, exosortase system | 99.84 | |
| PRK05077 | 414 | frsA fermentation/respiration switch protein; Revi | 99.84 | |
| PRK13604 | 307 | luxD acyl transferase; Provisional | 99.82 | |
| PRK11071 | 190 | esterase YqiA; Provisional | 99.81 | |
| PRK10566 | 249 | esterase; Provisional | 99.81 | |
| TIGR01836 | 350 | PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth | 99.8 | |
| PLN02872 | 395 | triacylglycerol lipase | 99.79 | |
| COG2021 | 368 | MET2 Homoserine acetyltransferase [Amino acid tran | 99.78 | |
| KOG1552 | 258 | consensus Predicted alpha/beta hydrolase [General | 99.78 | |
| COG0596 | 282 | MhpC Predicted hydrolases or acyltransferases (alp | 99.78 | |
| TIGR01838 | 532 | PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, | 99.77 | |
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 99.77 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 99.74 | |
| PF06342 | 297 | DUF1057: Alpha/beta hydrolase of unknown function | 99.69 | |
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 99.67 | |
| KOG4667 | 269 | consensus Predicted esterase [Lipid transport and | 99.67 | |
| PRK11460 | 232 | putative hydrolase; Provisional | 99.66 | |
| KOG2564 | 343 | consensus Predicted acetyltransferases and hydrola | 99.66 | |
| KOG4391 | 300 | consensus Predicted alpha/beta hydrolase BEM46 [Ge | 99.65 | |
| PF00326 | 213 | Peptidase_S9: Prolyl oligopeptidase family This fa | 99.65 | |
| KOG1838 | 409 | consensus Alpha/beta hydrolase [General function p | 99.63 | |
| TIGR02821 | 275 | fghA_ester_D S-formylglutathione hydrolase. This m | 99.6 | |
| TIGR03101 | 266 | hydr2_PEP hydrolase, ortholog 2, exosortase system | 99.6 | |
| COG0429 | 345 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.59 | |
| PLN02442 | 283 | S-formylglutathione hydrolase | 99.59 | |
| PLN00021 | 313 | chlorophyllase | 99.58 | |
| COG3208 | 244 | GrsT Predicted thioesterase involved in non-riboso | 99.57 | |
| PF03096 | 283 | Ndr: Ndr family; InterPro: IPR004142 This family c | 99.54 | |
| COG2945 | 210 | Predicted hydrolase of the alpha/beta superfamily | 99.5 | |
| TIGR01840 | 212 | esterase_phb esterase, PHB depolymerase family. Th | 99.48 | |
| PF06821 | 171 | Ser_hydrolase: Serine hydrolase; InterPro: IPR0106 | 99.45 | |
| TIGR03230 | 442 | lipo_lipase lipoprotein lipase. Members of this pr | 99.45 | |
| PF01738 | 218 | DLH: Dienelactone hydrolase family; InterPro: IPR0 | 99.44 | |
| PF02230 | 216 | Abhydrolase_2: Phospholipase/Carboxylesterase; Int | 99.43 | |
| KOG2931 | 326 | consensus Differentiation-related gene 1 protein ( | 99.43 | |
| PF10230 | 266 | DUF2305: Uncharacterised conserved protein (DUF230 | 99.43 | |
| PF00975 | 229 | Thioesterase: Thioesterase domain; InterPro: IPR00 | 99.42 | |
| KOG2565 | 469 | consensus Predicted hydrolases or acyltransferases | 99.39 | |
| TIGR01849 | 406 | PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, | 99.38 | |
| PRK10162 | 318 | acetyl esterase; Provisional | 99.35 | |
| cd00707 | 275 | Pancreat_lipase_like Pancreatic lipase-like enzyme | 99.35 | |
| COG0400 | 207 | Predicted esterase [General function prediction on | 99.33 | |
| PF05728 | 187 | UPF0227: Uncharacterised protein family (UPF0227); | 99.32 | |
| PF06500 | 411 | DUF1100: Alpha/beta hydrolase of unknown function | 99.31 | |
| PF05448 | 320 | AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR0 | 99.31 | |
| PRK10115 | 686 | protease 2; Provisional | 99.3 | |
| TIGR01839 | 560 | PHA_synth_II poly(R)-hydroxyalkanoic acid synthase | 99.28 | |
| TIGR00976 | 550 | /NonD putative hydrolase, CocE/NonD family. This m | 99.27 | |
| COG4757 | 281 | Predicted alpha/beta hydrolase [General function p | 99.27 | |
| COG3571 | 213 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.26 | |
| PF12146 | 79 | Hydrolase_4: Putative lysophospholipase; InterPro: | 99.22 | |
| PF09752 | 348 | DUF2048: Uncharacterized conserved protein (DUF204 | 99.2 | |
| PF08538 | 303 | DUF1749: Protein of unknown function (DUF1749); In | 99.18 | |
| COG0412 | 236 | Dienelactone hydrolase and related enzymes [Second | 99.18 | |
| COG3458 | 321 | Acetyl esterase (deacetylase) [Secondary metabolit | 99.17 | |
| PTZ00472 | 462 | serine carboxypeptidase (CBP1); Provisional | 99.15 | |
| PF02129 | 272 | Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 fam | 99.15 | |
| KOG2624 | 403 | consensus Triglyceride lipase-cholesterol esterase | 99.13 | |
| PRK05371 | 767 | x-prolyl-dipeptidyl aminopeptidase; Provisional | 99.12 | |
| PF07859 | 211 | Abhydrolase_3: alpha/beta hydrolase fold A web pag | 99.11 | |
| COG3545 | 181 | Predicted esterase of the alpha/beta hydrolase fol | 99.08 | |
| PF12740 | 259 | Chlorophyllase2: Chlorophyllase enzyme; InterPro: | 99.05 | |
| TIGR03502 | 792 | lipase_Pla1_cef extracellular lipase, Pla-1/cef fa | 99.03 | |
| COG3243 | 445 | PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me | 99.03 | |
| KOG2281 | 867 | consensus Dipeptidyl aminopeptidases/acylaminoacyl | 99.02 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 99.02 | |
| PF10503 | 220 | Esterase_phd: Esterase PHB depolymerase | 99.01 | |
| PF02273 | 294 | Acyl_transf_2: Acyl transferase; InterPro: IPR0031 | 98.99 | |
| PF06028 | 255 | DUF915: Alpha/beta hydrolase of unknown function ( | 98.99 | |
| KOG2100 | 755 | consensus Dipeptidyl aminopeptidase [Posttranslati | 98.94 | |
| PRK04940 | 180 | hypothetical protein; Provisional | 98.93 | |
| KOG3975 | 301 | consensus Uncharacterized conserved protein [Funct | 98.9 | |
| PF03959 | 212 | FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 | 98.88 | |
| KOG3043 | 242 | consensus Predicted hydrolase related to dienelact | 98.88 | |
| PF07819 | 225 | PGAP1: PGAP1-like protein; InterPro: IPR012908 The | 98.88 | |
| KOG4627 | 270 | consensus Kynurenine formamidase [Amino acid trans | 98.87 | |
| COG3319 | 257 | Thioesterase domains of type I polyketide synthase | 98.84 | |
| COG0657 | 312 | Aes Esterase/lipase [Lipid metabolism] | 98.84 | |
| PF03583 | 290 | LIP: Secretory lipase ; InterPro: IPR005152 This e | 98.84 | |
| COG4099 | 387 | Predicted peptidase [General function prediction o | 98.83 | |
| PF07224 | 307 | Chlorophyllase: Chlorophyllase; InterPro: IPR01082 | 98.8 | |
| KOG2551 | 230 | consensus Phospholipase/carboxyhydrolase [Amino ac | 98.79 | |
| smart00824 | 212 | PKS_TE Thioesterase. Peptide synthetases are invol | 98.78 | |
| PF03403 | 379 | PAF-AH_p_II: Platelet-activating factor acetylhydr | 98.77 | |
| PF06057 | 192 | VirJ: Bacterial virulence protein (VirJ); InterPro | 98.75 | |
| COG4188 | 365 | Predicted dienelactone hydrolase [General function | 98.73 | |
| KOG1515 | 336 | consensus Arylacetamide deacetylase [Defense mecha | 98.72 | |
| PF12715 | 390 | Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8 | 98.65 | |
| PF00450 | 415 | Peptidase_S10: Serine carboxypeptidase; InterPro: | 98.64 | |
| PF08840 | 213 | BAAT_C: BAAT / Acyl-CoA thioester hydrolase C term | 98.64 | |
| PLN02733 | 440 | phosphatidylcholine-sterol O-acyltransferase | 98.49 | |
| PF11339 | 581 | DUF3141: Protein of unknown function (DUF3141); In | 98.45 | |
| KOG2112 | 206 | consensus Lysophospholipase [Lipid transport and m | 98.39 | |
| KOG1553 | 517 | consensus Predicted alpha/beta hydrolase BAT5 [Gen | 98.32 | |
| PF01674 | 219 | Lipase_2: Lipase (class 2); InterPro: IPR002918 Li | 98.31 | |
| COG3509 | 312 | LpqC Poly(3-hydroxybutyrate) depolymerase [Seconda | 98.29 | |
| PF00151 | 331 | Lipase: Lipase; InterPro: IPR013818 Triglyceride l | 98.28 | |
| KOG3847 | 399 | consensus Phospholipase A2 (platelet-activating fa | 98.24 | |
| COG4814 | 288 | Uncharacterized protein with an alpha/beta hydrola | 98.24 | |
| PF05705 | 240 | DUF829: Eukaryotic protein of unknown function (DU | 98.21 | |
| PF05990 | 233 | DUF900: Alpha/beta hydrolase of unknown function ( | 98.21 | |
| KOG3253 | 784 | consensus Predicted alpha/beta hydrolase [General | 98.21 | |
| PF10340 | 374 | DUF2424: Protein of unknown function (DUF2424); In | 98.2 | |
| PF12048 | 310 | DUF3530: Protein of unknown function (DUF3530); In | 98.19 | |
| PRK10439 | 411 | enterobactin/ferric enterobactin esterase; Provisi | 98.16 | |
| KOG1551 | 371 | consensus Uncharacterized conserved protein [Funct | 98.11 | |
| PF04301 | 213 | DUF452: Protein of unknown function (DUF452); Inte | 98.0 | |
| PF08386 | 103 | Abhydrolase_4: TAP-like protein; InterPro: IPR0135 | 97.97 | |
| COG3150 | 191 | Predicted esterase [General function prediction on | 97.96 | |
| COG2936 | 563 | Predicted acyl esterases [General function predict | 97.88 | |
| COG1075 | 336 | LipA Predicted acetyltransferases and hydrolases w | 97.87 | |
| KOG4840 | 299 | consensus Predicted hydrolases or acyltransferases | 97.85 | |
| PLN02209 | 437 | serine carboxypeptidase | 97.84 | |
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 97.77 | |
| PF00756 | 251 | Esterase: Putative esterase; InterPro: IPR000801 T | 97.77 | |
| KOG1282 | 454 | consensus Serine carboxypeptidases (lysosomal cath | 97.74 | |
| cd00312 | 493 | Esterase_lipase Esterases and lipases (includes fu | 97.71 | |
| COG4782 | 377 | Uncharacterized protein conserved in bacteria [Fun | 97.69 | |
| PF05577 | 434 | Peptidase_S28: Serine carboxypeptidase S28; InterP | 97.64 | |
| KOG3967 | 297 | consensus Uncharacterized conserved protein [Funct | 97.63 | |
| PF10142 | 367 | PhoPQ_related: PhoPQ-activated pathogenicity-relat | 97.61 | |
| KOG2183 | 492 | consensus Prolylcarboxypeptidase (angiotensinase C | 97.59 | |
| PF05677 | 365 | DUF818: Chlamydia CHLPS protein (DUF818); InterPro | 97.57 | |
| COG1073 | 299 | Hydrolases of the alpha/beta superfamily [General | 97.55 | |
| PF05057 | 217 | DUF676: Putative serine esterase (DUF676); InterPr | 97.52 | |
| PLN02213 | 319 | sinapoylglucose-malate O-sinapoyltransferase/ carb | 97.49 | |
| KOG3724 | 973 | consensus Negative regulator of COPII vesicle form | 97.48 | |
| KOG2237 | 712 | consensus Predicted serine protease [Posttranslati | 97.31 | |
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 97.27 | |
| PLN02606 | 306 | palmitoyl-protein thioesterase | 97.2 | |
| KOG3101 | 283 | consensus Esterase D [General function prediction | 97.16 | |
| COG2272 | 491 | PnbA Carboxylesterase type B [Lipid metabolism] | 97.03 | |
| PF00135 | 535 | COesterase: Carboxylesterase family The prints ent | 96.85 | |
| PF02450 | 389 | LCAT: Lecithin:cholesterol acyltransferase; InterP | 96.72 | |
| COG0627 | 316 | Predicted esterase [General function prediction on | 96.66 | |
| COG4553 | 415 | DepA Poly-beta-hydroxyalkanoate depolymerase [Lipi | 96.65 | |
| PLN02633 | 314 | palmitoyl protein thioesterase family protein | 96.63 | |
| COG2382 | 299 | Fes Enterochelin esterase and related enzymes [Ino | 96.6 | |
| COG2939 | 498 | Carboxypeptidase C (cathepsin A) [Amino acid trans | 96.53 | |
| cd00741 | 153 | Lipase Lipase. Lipases are esterases that can hydr | 96.38 | |
| COG1505 | 648 | Serine proteases of the peptidase family S9A [Amin | 96.31 | |
| KOG2182 | 514 | consensus Hydrolytic enzymes of the alpha/beta hyd | 96.28 | |
| PF11144 | 403 | DUF2920: Protein of unknown function (DUF2920); In | 96.25 | |
| COG3946 | 456 | VirJ Type IV secretory pathway, VirJ component [In | 96.16 | |
| PF01764 | 140 | Lipase_3: Lipase (class 3); InterPro: IPR002921 Tr | 96.0 | |
| PF02089 | 279 | Palm_thioest: Palmitoyl protein thioesterase; Inte | 95.66 | |
| PF11187 | 224 | DUF2974: Protein of unknown function (DUF2974); In | 95.53 | |
| KOG2541 | 296 | consensus Palmitoyl protein thioesterase [Lipid tr | 95.39 | |
| KOG2521 | 350 | consensus Uncharacterized conserved protein [Funct | 95.17 | |
| COG2819 | 264 | Predicted hydrolase of the alpha/beta superfamily | 95.0 | |
| cd00519 | 229 | Lipase_3 Lipase (class 3). Lipases are esterases t | 94.87 | |
| PF07082 | 250 | DUF1350: Protein of unknown function (DUF1350); In | 94.79 | |
| COG4287 | 507 | PqaA PhoPQ-activated pathogenicity-related protein | 94.47 | |
| PF05576 | 448 | Peptidase_S37: PS-10 peptidase S37; InterPro: IPR0 | 94.38 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 94.29 | |
| KOG2369 | 473 | consensus Lecithin:cholesterol acyltransferase (LC | 94.19 | |
| PF06259 | 177 | Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR | 94.11 | |
| PLN02162 | 475 | triacylglycerol lipase | 93.72 | |
| PLN02454 | 414 | triacylglycerol lipase | 93.39 | |
| PLN00413 | 479 | triacylglycerol lipase | 93.28 | |
| KOG1516 | 545 | consensus Carboxylesterase and related proteins [G | 92.87 | |
| PLN02571 | 413 | triacylglycerol lipase | 92.77 | |
| KOG1283 | 414 | consensus Serine carboxypeptidases [Posttranslatio | 92.77 | |
| PLN02517 | 642 | phosphatidylcholine-sterol O-acyltransferase | 92.62 | |
| COG2830 | 214 | Uncharacterized protein conserved in bacteria [Fun | 92.1 | |
| PLN02408 | 365 | phospholipase A1 | 91.82 | |
| PF07519 | 474 | Tannase: Tannase and feruloyl esterase; InterPro: | 91.77 | |
| PF05277 | 345 | DUF726: Protein of unknown function (DUF726); Inte | 91.26 | |
| PLN02310 | 405 | triacylglycerol lipase | 91.1 | |
| PLN02934 | 515 | triacylglycerol lipase | 90.94 | |
| PLN02324 | 415 | triacylglycerol lipase | 90.16 | |
| PLN02802 | 509 | triacylglycerol lipase | 89.8 | |
| PF01083 | 179 | Cutinase: Cutinase; InterPro: IPR000675 Aerial pla | 89.71 | |
| PLN02753 | 531 | triacylglycerol lipase | 89.45 | |
| PF11288 | 207 | DUF3089: Protein of unknown function (DUF3089); In | 88.79 | |
| PF06850 | 202 | PHB_depo_C: PHB de-polymerase C-terminus; InterPro | 88.73 | |
| PLN02719 | 518 | triacylglycerol lipase | 88.62 | |
| PLN02761 | 527 | lipase class 3 family protein | 88.14 | |
| PLN03037 | 525 | lipase class 3 family protein; Provisional | 87.99 | |
| COG4947 | 227 | Uncharacterized protein conserved in bacteria [Fun | 86.34 | |
| KOG4388 | 880 | consensus Hormone-sensitive lipase HSL [Lipid tran | 84.85 | |
| KOG4569 | 336 | consensus Predicted lipase [Lipid transport and me | 84.56 | |
| PLN02847 | 633 | triacylglycerol lipase | 83.96 |
| >PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-78 Score=598.47 Aligned_cols=455 Identities=77% Similarity=1.300 Sum_probs=368.3
Q ss_pred ccchhhHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhHHHhhcCccccccCChhhhhcccCcceecccC-cceeE
Q 012188 4 AMCKTKLVLSFTGSLLNKAVSFIVFSFLDLFDFLLCMLYKVADFFIEAEWKPCYCSSAKEAITSSGKILVSEQG-KSKIV 82 (468)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 82 (468)
+|-|+.++|+.+|++||+|+||+||++||++|++||++||++||++|++|+||||+++.++...+|||.|||++ ||||+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~vf~~~d~~~~~~c~~~~~~~~~~~~~~~~c~c~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (481)
T PLN03087 2 AAAKARSALMGAGRALNEAVSFVVFSLLDILDFLLCFVYKVADYFFEAEWKPCYCSSAKEAIAASGKILVSERGGESKVV 81 (481)
T ss_pred chHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcccCCchhhhhhcccceeccccCCccee
Confidence 57799999999999999999999999999999999999999999999999999999999888788999999997 59999
Q ss_pred eeccccccccccccccccChhhhhhhhhhhhhhhhhhcccCccchhhhhhhc----cCcccccccchhhHHhhhhccCCC
Q 012188 83 CLTSSKLHLEEISDTLYTRPSLVSEASKQTVNELKRLKVDGNVAQSCERIKK----GTVRSTFTVNSTIIEMLQGKIGGQ 158 (468)
Q Consensus 83 ~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~----~~~~~~~~~~~~i~~~~~~~~g~~ 158 (468)
+++++|.++|+||||||.|||++++.+.+..+..+++.+......+|+..+. +.+++++|+|+.++++++++.|++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (481)
T PLN03087 82 SLSSTKLHLEEISDTLYTRPSLLSDASKLTVNELKKLKMEGKCVGSCEKTSNKRKRGTKKSTLTVNSTIVEMLRGKIGGQ 161 (481)
T ss_pred ecccchhhhhhhhhhhhcCcHHHHHHHHhhhcchhhhccccccccccccccccccccccccceeechhHHHHhhccccCC
Confidence 9999999999999999999999999999988888877776666666654443 457789999999999999999999
Q ss_pred CCCCCCCcCCCCceeEEEe-------------cCC----CCeEEEEecCCCCcc-chhhhhhhccccCCCcceEEEECCC
Q 012188 159 QSHPIPRWSDCDCKFCTCW-------------SSS----SRDTLFVKTQGPSAF-WTETLFPNFSSASKSTYRLFAIDLL 220 (468)
Q Consensus 159 ~~~~~~r~~d~~~~~~~~~-------------~~~----~p~vl~lHG~g~s~~-~~~~~~~~L~~~~~~gy~Via~D~~ 220 (468)
.+++.+||+|+.+..++.| ++. +|+|||+||++++.. |..++++.|.+..+++|+|+++|+|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~ 241 (481)
T PLN03087 162 QLHPAPRWSDCDCKFCTSWLSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLL 241 (481)
T ss_pred CCCCCCcccccccceeeeeEeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCC
Confidence 9999999999987777777 221 479999999988765 5445667776444579999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHH
Q 012188 221 GFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQY 300 (468)
Q Consensus 221 G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~ 300 (468)
|||.|+.+.+..|+++++++++...++++++.++++++||||||++++.+|.++|++|+++|+++++....+........
T Consensus 242 G~G~S~~p~~~~ytl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~ 321 (481)
T PLN03087 242 GFGRSPKPADSLYTLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQY 321 (481)
T ss_pred CCCCCcCCCCCcCCHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHH
Confidence 99999877656689999999994478999999999999999999999999999999999999999876654443333344
Q ss_pred HHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhc
Q 012188 301 VMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICG 380 (468)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (468)
..+.......|+...++.....|+....+.........+..++................+.+........++.+.+++..
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~ 401 (481)
T PLN03087 322 VMRKVAPRRVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICG 401 (481)
T ss_pred HHHHhcccccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhc
Confidence 45555555555555555666677766655544444445555666555555554444444444444444455555555554
Q ss_pred ccccccchHHHhhccCCCcEEEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 381 TANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 381 ~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
.....+..+..+..++++|+|+|+|++|.++|++.++.+++.+|++++++++++||++++.++|++|++.|++|++..
T Consensus 402 ~~~~l~~~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~~ 479 (481)
T PLN03087 402 SGSKLDGYLDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKVPRARVKVIDDKDHITIVVGRQKEFARELEEIWRRS 479 (481)
T ss_pred hhhhhhhHHHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCCCCEEEEeCCCCCcchhhcCHHHHHHHHHHHhhcc
Confidence 433333445555567899999999999999999999999999999999999999999885489999999999999764
|
|
| >PLN02824 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.7e-31 Score=252.13 Aligned_cols=267 Identities=19% Similarity=0.186 Sum_probs=171.8
Q ss_pred CCCceeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCC------CCCCCHHHHHHH
Q 012188 168 DCDCKFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPT------DSLYTVREHLDM 241 (468)
Q Consensus 168 d~~~~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~------~~~~t~~~~~~d 241 (468)
++..++|..+++++|+|||+||++++...|..+++.|+ +.|+|+++|+||||.|+.+. ...+++++++++
T Consensus 16 ~~~~i~y~~~G~~~~~vlllHG~~~~~~~w~~~~~~L~----~~~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~ 91 (294)
T PLN02824 16 KGYNIRYQRAGTSGPALVLVHGFGGNADHWRKNTPVLA----KSHRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQ 91 (294)
T ss_pred cCeEEEEEEcCCCCCeEEEECCCCCChhHHHHHHHHHH----hCCeEEEEcCCCCCCCCCCccccccccccCCHHHHHHH
Confidence 66778888877667999999999988877777889888 77899999999999998653 135899999999
Q ss_pred HHHHHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCc--hhhHHHHHhhcCCCCCchhhhhhh
Q 012188 242 IEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGA--QASQYVMRKVAPRRVWPLIAFGAS 319 (468)
Q Consensus 242 i~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 319 (468)
+ .++++.++.++++++||||||.+++.+|.++|++|+++|++++......... .........+....... .....
T Consensus 92 l-~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 168 (294)
T PLN02824 92 L-NDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRET--AVGKA 168 (294)
T ss_pred H-HHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhch--hHHHH
Confidence 9 6999999999999999999999999999999999999999997643211110 00010000000000000 00000
Q ss_pred hHHH---HHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccC
Q 012188 320 MACW---YEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHV 396 (468)
Q Consensus 320 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 396 (468)
.... ...+...+...+..... ........+...... ......+....... ........+.++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~---~~~~~~~~l~~i 233 (294)
T PLN02824 169 FFKSVATPETVKNILCQCYHDDSA--------VTDELVEAILRPGLE----PGAVDVFLDFISYS---GGPLPEELLPAV 233 (294)
T ss_pred HHHhhcCHHHHHHHHHHhccChhh--------ccHHHHHHHHhccCC----chHHHHHHHHhccc---cccchHHHHhhc
Confidence 0000 00000000000000000 000000000000000 00011111111100 011223446788
Q ss_pred CCcEEEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 397 KCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 397 ~~PvLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
++|+++|+|++|.++|.+.++.+.+..+++++++++++||+++. |+|+++++.|.+|+++
T Consensus 234 ~~P~lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 234 KCPVLIAWGEKDPWEPVELGRAYANFDAVEDFIVLPGVGHCPQD-EAPELVNPLIESFVAR 293 (294)
T ss_pred CCCeEEEEecCCCCCChHHHHHHHhcCCccceEEeCCCCCChhh-hCHHHHHHHHHHHHhc
Confidence 99999999999999999999998888888999999999999997 9999999999999975
|
|
| >PLN02679 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-29 Score=247.40 Aligned_cols=267 Identities=17% Similarity=0.200 Sum_probs=165.2
Q ss_pred ceeEEEecCC-----CCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 012188 171 CKFCTCWSSS-----SRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKS 245 (468)
Q Consensus 171 ~~~~~~~~~~-----~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~ 245 (468)
.++|...+++ +|+|||+||++++...|..+++.|. ++|+|+++|+||||.|+.+....++++++++++ ..
T Consensus 73 ~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~----~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l-~~ 147 (360)
T PLN02679 73 SINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLA----KNYTVYAIDLLGFGASDKPPGFSYTMETWAELI-LD 147 (360)
T ss_pred eEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHh----cCCEEEEECCCCCCCCCCCCCccccHHHHHHHH-HH
Confidence 6777766543 5899999999988776667888887 789999999999999987755568999999999 68
Q ss_pred HhcccCCceEEEEEEcccHHHHHHHHH-hCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCC-chh-hhhhhhHH
Q 012188 246 VIEPNKVKSFHIVAHSLGCILALALAV-KHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVW-PLI-AFGASMAC 322 (468)
Q Consensus 246 l~~~l~~~~i~lvGhS~Gg~ial~~a~-~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~ 322 (468)
+++.++.++++|+||||||.+++.++. .+|++|+++|+++++......... ..+......+.... ... ........
T Consensus 148 ~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (360)
T PLN02679 148 FLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVV-DDWRIKLLLPLLWLIDFLLKQRGIASA 226 (360)
T ss_pred HHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCcccccccccc-chHHHhhhcchHHHHHHHhhchhhHHH
Confidence 999999999999999999999999887 479999999999976432111100 00100000000000 000 00000000
Q ss_pred HHHH------HhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccC
Q 012188 323 WYEH------ISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHV 396 (468)
Q Consensus 323 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 396 (468)
+... +.......+.......+ ............ ......+....... ........+.++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~---~~~~~~~~~~~~~~---~~~~~~~~l~~i 291 (360)
T PLN02679 227 LFNRVKQRDNLKNILLSVYGNKEAVDD---------ELVEIIRGPADD---EGALDAFVSIVTGP---PGPNPIKLIPRI 291 (360)
T ss_pred HHHHhcCHHHHHHHHHHhccCcccCCH---------HHHHHHHhhccC---CChHHHHHHHHhcC---CCCCHHHHhhhc
Confidence 0000 00000000000000000 000000000000 00111111111110 111223445788
Q ss_pred CCcEEEEeeCCCCccChhh-----HHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhcC
Q 012188 397 KCDVNVFHGEDDELIPVEC-----SYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSSS 459 (468)
Q Consensus 397 ~~PvLii~G~~D~~vp~~~-----~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~ 459 (468)
++|+|+|+|++|.++|++. .+.+.+.+|++++++++++||+++. |+|+++++.|.+||++..
T Consensus 292 ~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~-E~Pe~~~~~I~~FL~~~~ 358 (360)
T PLN02679 292 SLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHD-DRPDLVHEKLLPWLAQLP 358 (360)
T ss_pred CCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccc-cCHHHHHHHHHHHHHhcC
Confidence 9999999999999999863 2456677899999999999999997 999999999999998643
|
|
| >PRK03592 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-29 Score=241.30 Aligned_cols=268 Identities=13% Similarity=0.165 Sum_probs=165.6
Q ss_pred CCCceeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHh
Q 012188 168 DCDCKFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVI 247 (468)
Q Consensus 168 d~~~~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~ 247 (468)
++..++|..++ ++++|||+||++++...|..+++.|. +.|+|+++|+||||.|+.+.. .+++.++++++ ..++
T Consensus 15 ~g~~i~y~~~G-~g~~vvllHG~~~~~~~w~~~~~~L~----~~~~via~D~~G~G~S~~~~~-~~~~~~~a~dl-~~ll 87 (295)
T PRK03592 15 LGSRMAYIETG-EGDPIVFLHGNPTSSYLWRNIIPHLA----GLGRCLAPDLIGMGASDKPDI-DYTFADHARYL-DAWF 87 (295)
T ss_pred CCEEEEEEEeC-CCCEEEEECCCCCCHHHHHHHHHHHh----hCCEEEEEcCCCCCCCCCCCC-CCCHHHHHHHH-HHHH
Confidence 55667787776 56899999999988887777888887 667999999999999987653 58999999999 6999
Q ss_pred cccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCC--chhhHHHHHhhcCCCCCchhhhhhhhHHHHH
Q 012188 248 EPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKG--AQASQYVMRKVAPRRVWPLIAFGASMACWYE 325 (468)
Q Consensus 248 ~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (468)
++++.++++++||||||.+|+.++.++|++|+++|++++...+.... ..........+............ ......
T Consensus 88 ~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 165 (295)
T PRK03592 88 DALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEMVLE--ENVFIE 165 (295)
T ss_pred HHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccccccc--hhhHHh
Confidence 99999999999999999999999999999999999999754321110 00011111111100000000000 000000
Q ss_pred HHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhh-HhHHHh-cccc---cccchHHHhhccCCCcE
Q 012188 326 HISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHT-LHNIIC-GTAN---KLDGYLDAVRNHVKCDV 400 (468)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~---~~~~~~~~~~~~i~~Pv 400 (468)
.+ ..... .. .. .......+. ..+........... ...... .... .........+.++++|+
T Consensus 166 ~~---~~~~~-~~-~~--------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 231 (295)
T PRK03592 166 RV---LPGSI-LR-PL--------SDEEMAVYR-RPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPK 231 (295)
T ss_pred hc---ccCcc-cc-cC--------CHHHHHHHH-hhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCe
Confidence 00 00000 00 00 000000000 00000000000000 000000 0000 00011233457889999
Q ss_pred EEEeeCCCCccChhhHHH-HHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhcC
Q 012188 401 NVFHGEDDELIPVECSYN-VQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSSS 459 (468)
Q Consensus 401 Lii~G~~D~~vp~~~~~~-l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~ 459 (468)
|+|+|++|.++++....+ +.+.++++++++++++||+++. ++|+++++.|.+|+++..
T Consensus 232 lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~p~~v~~~i~~fl~~~~ 290 (295)
T PRK03592 232 LLINAEPGAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQE-DSPEEIGAAIAAWLRRLR 290 (295)
T ss_pred EEEeccCCcccCcHHHHHHHHHhhhhcceeeccCcchhhhh-cCHHHHHHHHHHHHHHhc
Confidence 999999999995554444 4556789999999999999997 999999999999998754
|
|
| >KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.6e-30 Score=244.58 Aligned_cols=262 Identities=28% Similarity=0.427 Sum_probs=187.5
Q ss_pred CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCC-CCCCCCCCCCCHHHHHHHHHHHHhcccCCceEEEE
Q 012188 180 SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFG-RSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIV 258 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G-~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i~lv 258 (468)
.+|+||++|||+++...|..+++.|... .|++|+++|++||| .|..+.+..|+..++++.+ ..+....+.++++++
T Consensus 57 ~~~pvlllHGF~~~~~~w~~~~~~L~~~--~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i-~~~~~~~~~~~~~lv 133 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSFSWRRVVPLLSKA--KGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELI-RRFVKEVFVEPVSLV 133 (326)
T ss_pred CCCcEEEeccccCCcccHhhhccccccc--cceEEEEEecCCCCcCCCCCCCCceehhHHHHHH-HHHHHhhcCcceEEE
Confidence 5789999999998777666788888821 25999999999999 5556666679999999999 578888888889999
Q ss_pred EEcccHHHHHHHHHhCCCccceEE---EecCCCCCCCCCchhh-HHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHH
Q 012188 259 AHSLGCILALALAVKHPGSVKSLT---LLAPPYYPVPKGAQAS-QYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLL 334 (468)
Q Consensus 259 GhS~Gg~ial~~a~~~p~~v~~lV---l~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (468)
|||+||++|+.+|+.+|+.|+++| +++++....+...... ..+.........+.+.........+...+.......
T Consensus 134 ghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 213 (326)
T KOG1454|consen 134 GHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEGLLRCLKVV 213 (326)
T ss_pred EeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchhheeHhhhcceeee
Confidence 999999999999999999999999 6777766544443332 333334444445555544444444555555554444
Q ss_pred hhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCC-CcEEEEeeCCCCccCh
Q 012188 335 ICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVK-CDVNVFHGEDDELIPV 413 (468)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~PvLii~G~~D~~vp~ 413 (468)
.......++.......++. ........+..+...+... +.......+++. +|+++++|++|.++|.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~pvlii~G~~D~~~p~ 280 (326)
T KOG1454|consen 214 YTDPSRLLEKLLHLLSRPV---------KEHFHRDARLSLFLELLGF----DENLLSLIKKIWKCPVLIIWGDKDQIVPL 280 (326)
T ss_pred ccccccchhhhhhheeccc---------ccchhhhheeeEEEeccCc----cchHHHhhccccCCceEEEEcCcCCccCH
Confidence 4444444444333333322 0011111122222222111 233344456666 9999999999999999
Q ss_pred hhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 414 ECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 414 ~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
+.++.+.+.+||+++++++++||.++. |.|+++++.|..||...
T Consensus 281 ~~~~~~~~~~pn~~~~~I~~~gH~~h~-e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 281 ELAEELKKKLPNAELVEIPGAGHLPHL-ERPEEVAALLRSFIARL 324 (326)
T ss_pred HHHHHHHhhCCCceEEEeCCCCccccc-CCHHHHHHHHHHHHHHh
Confidence 999999999999999999999999997 99999999999999864
|
|
| >TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-29 Score=240.92 Aligned_cols=257 Identities=16% Similarity=0.156 Sum_probs=167.7
Q ss_pred CCCceeEEEec-C-CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 012188 168 DCDCKFCTCWS-S-SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKS 245 (468)
Q Consensus 168 d~~~~~~~~~~-~-~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~ 245 (468)
++..++|..+. + ++++|||+||++++...|..+++.|. ++|+|+++|+||||.|+.+. ..++++++++++ .+
T Consensus 10 ~~~~~~~~~~~~~~~~~plvllHG~~~~~~~w~~~~~~L~----~~~~vi~~Dl~G~G~S~~~~-~~~~~~~~~~~~-~~ 83 (276)
T TIGR02240 10 DGQSIRTAVRPGKEGLTPLLIFNGIGANLELVFPFIEALD----PDLEVIAFDVPGVGGSSTPR-HPYRFPGLAKLA-AR 83 (276)
T ss_pred CCcEEEEEEecCCCCCCcEEEEeCCCcchHHHHHHHHHhc----cCceEEEECCCCCCCCCCCC-CcCcHHHHHHHH-HH
Confidence 44557776653 3 34799999999987776667888887 78999999999999998664 358999999999 69
Q ss_pred HhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHH
Q 012188 246 VIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYE 325 (468)
Q Consensus 246 l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (468)
+++.++.++++|+||||||.+++.+|.++|++|+++|+++++......... .........................++.
T Consensus 84 ~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (276)
T TIGR02240 84 MLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGK-PKVLMMMASPRRYIQPSHGIHIAPDIYG 162 (276)
T ss_pred HHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCc-hhHHHHhcCchhhhccccccchhhhhcc
Confidence 999999999999999999999999999999999999999987643111100 1111100000000000000000000000
Q ss_pred HHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEee
Q 012188 326 HISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHG 405 (468)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G 405 (468)
........... ................ ..... ........+.++++|+|+|+|
T Consensus 163 -------~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~---~~~~~----~~~~~~~~l~~i~~P~lii~G 215 (276)
T TIGR02240 163 -------GAFRRDPELAM-------------AHASKVRSGGKLGYYW---QLFAG----LGWTSIHWLHKIQQPTLVLAG 215 (276)
T ss_pred -------ceeeccchhhh-------------hhhhhcccCCCchHHH---HHHHH----cCCchhhHhhcCCCCEEEEEe
Confidence 00000000000 0000000000000000 00000 011112335788999999999
Q ss_pred CCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhcCC
Q 012188 406 EDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSSSG 460 (468)
Q Consensus 406 ~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~~ 460 (468)
++|.++|++.++.+.+.+|+++++++++ ||+++. ++|+++++.|.+|+++...
T Consensus 216 ~~D~~v~~~~~~~l~~~~~~~~~~~i~~-gH~~~~-e~p~~~~~~i~~fl~~~~~ 268 (276)
T TIGR02240 216 DDDPIIPLINMRLLAWRIPNAELHIIDD-GHLFLI-TRAEAVAPIIMKFLAEERQ 268 (276)
T ss_pred CCCCcCCHHHHHHHHHhCCCCEEEEEcC-CCchhh-ccHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999986 999997 9999999999999987543
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. |
| >PRK00870 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5e-29 Score=240.04 Aligned_cols=257 Identities=17% Similarity=0.165 Sum_probs=161.9
Q ss_pred ceeEEEecC-CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCC-CCCCHHHHHHHHHHHHhc
Q 012188 171 CKFCTCWSS-SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD-SLYTVREHLDMIEKSVIE 248 (468)
Q Consensus 171 ~~~~~~~~~-~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~-~~~t~~~~~~di~~~l~~ 248 (468)
.++|...+. ++|+|||+||++.+...|..+++.|+ ++||+|+++|+||||.|+.+.. ..++++++++++ ..+++
T Consensus 35 ~i~y~~~G~~~~~~lvliHG~~~~~~~w~~~~~~L~---~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l-~~~l~ 110 (302)
T PRK00870 35 RMHYVDEGPADGPPVLLLHGEPSWSYLYRKMIPILA---AAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWM-RSWFE 110 (302)
T ss_pred EEEEEecCCCCCCEEEEECCCCCchhhHHHHHHHHH---hCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHH-HHHHH
Confidence 355665543 47899999999887776667888886 3689999999999999976643 458999999999 69999
Q ss_pred ccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCch-hhHHHHHhhcCCCCCchhhhhhhhHHHHHHH
Q 012188 249 PNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQ-ASQYVMRKVAPRRVWPLIAFGASMACWYEHI 327 (468)
Q Consensus 249 ~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (468)
+++.++++++||||||.+++.+|.++|++|+++|++++.......... .......... ..+... ...+...
T Consensus 111 ~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~----~~~~~~~- 182 (302)
T PRK00870 111 QLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAWRAFSQ---YSPVLP----VGRLVNG- 182 (302)
T ss_pred HcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhhhcccc---cCchhh----HHHHhhc-
Confidence 999999999999999999999999999999999999875322110000 0000000000 000000 0000000
Q ss_pred hhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhccc----ccccchHHHhhccCCCcEEEE
Q 012188 328 SRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTA----NKLDGYLDAVRNHVKCDVNVF 403 (468)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~i~~PvLii 403 (468)
... ....+.....+... +.................... ..........+.++++|+++|
T Consensus 183 ------~~~--~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii 245 (302)
T PRK00870 183 ------GTV--RDLSDAVRAAYDAP---------FPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTA 245 (302)
T ss_pred ------ccc--ccCCHHHHHHhhcc---------cCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEE
Confidence 000 00000000000000 000000000000000000000 000001112347889999999
Q ss_pred eeCCCCccChhhHHHHHHhCCCCe---EEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 404 HGEDDELIPVECSYNVQRKIPRAR---VKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 404 ~G~~D~~vp~~~~~~l~~~~p~~~---l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
+|++|.++|.+. +++.+.+|+++ +.+++++||++++ |+|+++++.|.+|+++.
T Consensus 246 ~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 246 FSDSDPITGGGD-AILQKRIPGAAGQPHPTIKGAGHFLQE-DSGEELAEAVLEFIRAT 301 (302)
T ss_pred ecCCCCcccCch-HHHHhhcccccccceeeecCCCccchh-hChHHHHHHHHHHHhcC
Confidence 999999999866 88999999876 8899999999997 99999999999999764
|
|
| >PRK03204 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-28 Score=233.60 Aligned_cols=261 Identities=14% Similarity=0.144 Sum_probs=159.8
Q ss_pred CCCceeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHh
Q 012188 168 DCDCKFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVI 247 (468)
Q Consensus 168 d~~~~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~ 247 (468)
++..++|..++ ++|+|||+||++.+...|..+.+.|. ++|+|+++|+||||.|+.+....++++++++++ ..++
T Consensus 22 ~~~~i~y~~~G-~~~~iv~lHG~~~~~~~~~~~~~~l~----~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~-~~~~ 95 (286)
T PRK03204 22 SRGRIHYIDEG-TGPPILLCHGNPTWSFLYRDIIVALR----DRFRCVAPDYLGFGLSERPSGFGYQIDEHARVI-GEFV 95 (286)
T ss_pred CCcEEEEEECC-CCCEEEEECCCCccHHHHHHHHHHHh----CCcEEEEECCCCCCCCCCCCccccCHHHHHHHH-HHHH
Confidence 44557777766 46899999999876665556778887 789999999999999987765568899999999 6999
Q ss_pred cccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHH
Q 012188 248 EPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHI 327 (468)
Q Consensus 248 ~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (468)
++++.++++++||||||.+++.++.++|++|+++|+++++....... ............. .. ..... ...+
T Consensus 96 ~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~--~~~~~~~~~~~~~-~~-----~~~~~-~~~~ 166 (286)
T PRK03204 96 DHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTL--AMKAFSRVMSSPP-VQ-----YAILR-RNFF 166 (286)
T ss_pred HHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCch--hHHHHHHHhcccc-ch-----hhhhh-hhHH
Confidence 99999999999999999999999999999999999988754321110 0000000000000 00 00000 0000
Q ss_pred -hhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhc-cCCCcEEEEee
Q 012188 328 -SRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRN-HVKCDVNVFHG 405 (468)
Q Consensus 328 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~PvLii~G 405 (468)
.+...... .... .......+ ...............+...+................ .+++|+++|+|
T Consensus 167 ~~~~~~~~~--~~~~--------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G 235 (286)
T PRK03204 167 VERLIPAGT--EHRP--------SSAVMAHY-RAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWG 235 (286)
T ss_pred HHHhccccc--cCCC--------CHHHHHHh-cCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEec
Confidence 00000000 0000 00000000 000000000000000000000000000000000001 12899999999
Q ss_pred CCCCccChh-hHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHH
Q 012188 406 EDDELIPVE-CSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIW 455 (468)
Q Consensus 406 ~~D~~vp~~-~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl 455 (468)
++|.++++. ..+.+.+.+|++++++++++||+++. |+|+++++.|.+|+
T Consensus 236 ~~D~~~~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~-e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 236 MKDVAFRPKTILPRLRATFPDHVLVELPNAKHFIQE-DAPDRIAAAIIERF 285 (286)
T ss_pred CCCcccCcHHHHHHHHHhcCCCeEEEcCCCcccccc-cCHHHHHHHHHHhc
Confidence 999988654 57889999999999999999999997 99999999999997
|
|
| >TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=234.69 Aligned_cols=258 Identities=17% Similarity=0.202 Sum_probs=155.8
Q ss_pred CceeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcc
Q 012188 170 DCKFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEP 249 (468)
Q Consensus 170 ~~~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~ 249 (468)
..++|...+ ++|+|||+||++.+...+..++..+..+++.||+|+++|+||||.|+.+.........+++++ .++++.
T Consensus 20 ~~~~y~~~g-~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l-~~~l~~ 97 (282)
T TIGR03343 20 FRIHYNEAG-NGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAV-KGLMDA 97 (282)
T ss_pred eeEEEEecC-CCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHH-HHHHHH
Confidence 345666554 568999999988765433222222222224789999999999999986542212222567888 689999
Q ss_pred cCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCc----hhhHHHHHhhcCCCCCchhhhhhhhHHHHH
Q 012188 250 NKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGA----QASQYVMRKVAPRRVWPLIAFGASMACWYE 325 (468)
Q Consensus 250 l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (468)
++.++++++||||||.+++.+|.++|++++++|+++++........ .......+.... .. ..
T Consensus 98 l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----------~~ 163 (282)
T TIGR03343 98 LDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAE---PS-----------YE 163 (282)
T ss_pred cCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcC---CC-----------HH
Confidence 9999999999999999999999999999999999997643211000 000000000000 00 00
Q ss_pred HHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEee
Q 012188 326 HISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHG 405 (468)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G 405 (468)
.................+...+.. ....... ........... .............++++++|+|+++|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~l~~i~~Pvlli~G 231 (282)
T TIGR03343 164 TLKQMLNVFLFDQSLITEELLQGR---------WENIQRQ--PEHLKNFLISS-QKAPLSTWDVTARLGEIKAKTLVTWG 231 (282)
T ss_pred HHHHHHhhCccCcccCcHHHHHhH---------HHHhhcC--HHHHHHHHHhc-cccccccchHHHHHhhCCCCEEEEEc
Confidence 000000000000000000000000 0000000 00000000000 00000011223445789999999999
Q ss_pred CCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHh
Q 012188 406 EDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWR 456 (468)
Q Consensus 406 ~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~ 456 (468)
++|.++|++.++++++.+|++++++++++||+++. |+|+.+++.|.+|++
T Consensus 232 ~~D~~v~~~~~~~~~~~~~~~~~~~i~~agH~~~~-e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 232 RDDRFVPLDHGLKLLWNMPDAQLHVFSRCGHWAQW-EHADAFNRLVIDFLR 281 (282)
T ss_pred cCCCcCCchhHHHHHHhCCCCEEEEeCCCCcCCcc-cCHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999997 999999999999995
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. |
| >PLN02965 Probable pheophorbidase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-28 Score=228.53 Aligned_cols=244 Identities=14% Similarity=0.101 Sum_probs=156.5
Q ss_pred eEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCC-ceEEEEEEc
Q 012188 183 DTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKV-KSFHIVAHS 261 (468)
Q Consensus 183 ~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~-~~i~lvGhS 261 (468)
+|||+||++.+...|..+++.|. +.+|+|+++|+||||.|+.+....++++++++++ ..+++.++. ++++++|||
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~---~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl-~~~l~~l~~~~~~~lvGhS 80 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLD---AAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPL-FALLSDLPPDHKVILVGHS 80 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHh---hCCceEEEecCCcCCCCCCCccccCCHHHHHHHH-HHHHHhcCCCCCEEEEecC
Confidence 59999999887766667888884 3799999999999999986655568999999999 699999987 499999999
Q ss_pred ccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhc-CCCCCchh-hhh--hhhHHHHHHHhhHHHHHhhc
Q 012188 262 LGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVA-PRRVWPLI-AFG--ASMACWYEHISRTICLLICK 337 (468)
Q Consensus 262 ~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~ 337 (468)
|||.+++.++.++|++|+++|++++........ .......... ....|... ... .....+.... ......+..
T Consensus 81 mGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 157 (255)
T PLN02965 81 IGGGSVTEALCKFTDKISMAIYVAAAMVKPGSI--ISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKP-EFVRHYYYN 157 (255)
T ss_pred cchHHHHHHHHhCchheeEEEEEccccCCCCCC--ccHHHHhhhhccccceeeeeccCCCCCcchhhcCH-HHHHHHHhc
Confidence 999999999999999999999999753211100 0011110000 00000000 000 0000000000 000000000
Q ss_pred cchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChhhHH
Q 012188 338 NHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSY 417 (468)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~ 417 (468)
.... + .. ......+.... ..... .. ......+..+++|+++++|++|..+|++.++
T Consensus 158 ~~~~-~---------~~-~~~~~~~~~~~----~~~~~--------~~-~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~ 213 (255)
T PLN02965 158 QSPL-E---------DY-TLSSKLLRPAP----VRAFQ--------DL-DKLPPNPEAEKVPRVYIKTAKDNLFDPVRQD 213 (255)
T ss_pred CCCH-H---------HH-HHHHHhcCCCC----Ccchh--------hh-hhccchhhcCCCCEEEEEcCCCCCCCHHHHH
Confidence 0000 0 00 00000000000 00000 00 0011123468999999999999999999999
Q ss_pred HHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 418 NVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 418 ~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
.+.+.+|++++++++++||+++. |+|++|++.|.+|++..
T Consensus 214 ~~~~~~~~a~~~~i~~~GH~~~~-e~p~~v~~~l~~~~~~~ 253 (255)
T PLN02965 214 VMVENWPPAQTYVLEDSDHSAFF-SVPTTLFQYLLQAVSSL 253 (255)
T ss_pred HHHHhCCcceEEEecCCCCchhh-cCHHHHHHHHHHHHHHh
Confidence 99999999999999999999998 99999999999998764
|
|
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=231.86 Aligned_cols=249 Identities=15% Similarity=0.160 Sum_probs=154.2
Q ss_pred eeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccC
Q 012188 172 KFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNK 251 (468)
Q Consensus 172 ~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~ 251 (468)
++|..++.+.|+|||+||++++...|..+.+.|. ++|+|+++|+||||.|+.+. .++++++++++ .. ++
T Consensus 4 ~~y~~~G~g~~~ivllHG~~~~~~~w~~~~~~L~----~~~~vi~~Dl~G~G~S~~~~--~~~~~~~~~~l-~~----~~ 72 (256)
T PRK10349 4 IWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELS----SHFTLHLVDLPGFGRSRGFG--ALSLADMAEAV-LQ----QA 72 (256)
T ss_pred cchhhcCCCCCeEEEECCCCCChhHHHHHHHHHh----cCCEEEEecCCCCCCCCCCC--CCCHHHHHHHH-Hh----cC
Confidence 4455555544579999999887776667888887 78999999999999997653 47888888777 32 45
Q ss_pred CceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCc--hhhHHHHHhhcCCCCCchhhhhhhhHHHH-HHHh
Q 012188 252 VKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGA--QASQYVMRKVAPRRVWPLIAFGASMACWY-EHIS 328 (468)
Q Consensus 252 ~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 328 (468)
.++++++||||||.+++.+|.++|++|+++|++++......... ........... ....... ....
T Consensus 73 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~ 141 (256)
T PRK10349 73 PDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQ-----------QQLSDDFQRTVE 141 (256)
T ss_pred CCCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHH-----------HHHHhchHHHHH
Confidence 68999999999999999999999999999999987432211000 00000000000 0000000 0000
Q ss_pred hHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCC
Q 012188 329 RTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDD 408 (468)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D 408 (468)
.................. ........... .............. .......+.++++|+|+++|++|
T Consensus 142 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~--~~~~~~~~~~~~~~------~~~~~~~l~~i~~P~lii~G~~D 207 (256)
T PRK10349 142 RFLALQTMGTETARQDAR------ALKKTVLALPM--PEVDVLNGGLEILK------TVDLRQPLQNVSMPFLRLYGYLD 207 (256)
T ss_pred HHHHHHHccCchHHHHHH------HHHHHhhccCC--CcHHHHHHHHHHHH------hCccHHHHhhcCCCeEEEecCCC
Confidence 000000000000000000 00000000000 00000000000000 11233445788999999999999
Q ss_pred CccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 409 ELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 409 ~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
.++|.+.++.+.+.+|++++++++++||++++ |+|++|++.+.+|-++
T Consensus 208 ~~~~~~~~~~~~~~i~~~~~~~i~~~gH~~~~-e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 208 GLVPRKVVPMLDKLWPHSESYIFAKAAHAPFI-SHPAEFCHLLVALKQR 255 (256)
T ss_pred ccCCHHHHHHHHHhCCCCeEEEeCCCCCCccc-cCHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999998 9999999999998653
|
|
| >PRK06489 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-27 Score=236.22 Aligned_cols=277 Identities=17% Similarity=0.163 Sum_probs=162.3
Q ss_pred CCCceeEEEecCC--------CCeEEEEecCCCCc-cch-hhhhhhc----cccCCCcceEEEECCCCCCCCCCCCCC--
Q 012188 168 DCDCKFCTCWSSS--------SRDTLFVKTQGPSA-FWT-ETLFPNF----SSASKSTYRLFAIDLLGFGRSPKPTDS-- 231 (468)
Q Consensus 168 d~~~~~~~~~~~~--------~p~vl~lHG~g~s~-~~~-~~~~~~L----~~~~~~gy~Via~D~~G~G~S~~~~~~-- 231 (468)
++..++|...+++ +|+|||+||++++. .|+ ..+.+.| ...+.++|+|+++|+||||.|+.+.+.
T Consensus 48 ~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~ 127 (360)
T PRK06489 48 PELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLR 127 (360)
T ss_pred CCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCC
Confidence 4566777777653 68999999998764 454 2344333 111237899999999999999866432
Q ss_pred ----CCCHHHHHHHHHHHHhcccCCceEE-EEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCch-hhHHHHHhh
Q 012188 232 ----LYTVREHLDMIEKSVIEPNKVKSFH-IVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQ-ASQYVMRKV 305 (468)
Q Consensus 232 ----~~t~~~~~~di~~~l~~~l~~~~i~-lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~-~~~~~~~~~ 305 (468)
.|+++++++++...+++++++++++ ++||||||++|+.+|.++|++|+++|++++.......... .........
T Consensus 128 ~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~~~~~~~~~~~ 207 (360)
T PRK06489 128 AAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNWMWRRMLIESI 207 (360)
T ss_pred CCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHHHHHHHHHHHH
Confidence 4799999998843456889999985 8999999999999999999999999999875322111100 001111111
Q ss_pred cCCCCCchhhhhh---hhHHHHHHHhhHHH---HHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHh
Q 012188 306 APRRVWPLIAFGA---SMACWYEHISRTIC---LLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIIC 379 (468)
Q Consensus 306 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (468)
.....+....... ....+......... ............... ........ ... .....+. ....
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-~~~-~~~~~~~---~~~~ 277 (360)
T PRK06489 208 RNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADK-----LVDERLAA-PVT-ADANDFL---YQWD 277 (360)
T ss_pred HhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHH-----HHHHHHHh-hhh-cCHHHHH---HHHH
Confidence 1111110000000 00000000000000 000000000000000 00000000 000 0000000 0000
Q ss_pred cccccccchHHHhhccCCCcEEEEeeCCCCccChhhH--HHHHHhCCCCeEEEecCC----CccccccCcHHHHHHHHHH
Q 012188 380 GTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECS--YNVQRKIPRARVKVIEKK----DHITIVVGRQKTFARELEE 453 (468)
Q Consensus 380 ~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~--~~l~~~~p~~~l~~i~~~----gH~~~~~e~p~~~~~~i~~ 453 (468)
. .........+.+|++|+|+|+|++|.++|++.+ +.+.+.+|++++++++++ ||+++ ++|++|++.|.+
T Consensus 278 ~---~~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~--e~P~~~~~~i~~ 352 (360)
T PRK06489 278 S---SRDYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGTT--GSAKFWKAYLAE 352 (360)
T ss_pred H---hhccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCCCCCcccc--cCHHHHHHHHHH
Confidence 0 011123455688999999999999999999876 789999999999999996 99985 699999999999
Q ss_pred HHhhcC
Q 012188 454 IWRSSS 459 (468)
Q Consensus 454 fl~~~~ 459 (468)
||++..
T Consensus 353 FL~~~~ 358 (360)
T PRK06489 353 FLAQVP 358 (360)
T ss_pred HHHhcc
Confidence 998653
|
|
| >PRK10673 acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-27 Score=225.06 Aligned_cols=237 Identities=12% Similarity=0.154 Sum_probs=157.7
Q ss_pred CCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceEEEE
Q 012188 179 SSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIV 258 (468)
Q Consensus 179 ~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i~lv 258 (468)
+++|+|||+||++++...+..+...|. ++|+|+++|+||||.|..+. .++++++++|+ .++++.++.++++++
T Consensus 14 ~~~~~iv~lhG~~~~~~~~~~~~~~l~----~~~~vi~~D~~G~G~s~~~~--~~~~~~~~~d~-~~~l~~l~~~~~~lv 86 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLDNLGVLARDLV----NDHDIIQVDMRNHGLSPRDP--VMNYPAMAQDL-LDTLDALQIEKATFI 86 (255)
T ss_pred CCCCCEEEECCCCCchhHHHHHHHHHh----hCCeEEEECCCCCCCCCCCC--CCCHHHHHHHH-HHHHHHcCCCceEEE
Confidence 457899999999888776667888877 78999999999999998654 47999999999 689999999999999
Q ss_pred EEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHHhhcc
Q 012188 259 AHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKN 338 (468)
Q Consensus 259 GhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (468)
||||||.+++.+|.++|++|+++|++++........ ............... . .....
T Consensus 87 GhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~--~~~~~~~~~~~~~~~---~----~~~~~-------------- 143 (255)
T PRK10673 87 GHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVR--RHDEIFAAINAVSEA---G----ATTRQ-------------- 143 (255)
T ss_pred EECHHHHHHHHHHHhCHhhcceEEEEecCCCCccch--hhHHHHHHHHHhhhc---c----cccHH--------------
Confidence 999999999999999999999999997532211100 000000000000000 0 00000
Q ss_pred chhHHHHHHHHhhhHHHHHhhhcccccc----chhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChh
Q 012188 339 HRVWEFLAKLVTRNRIRTFLLEGFFCHT----HNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVE 414 (468)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~ 414 (468)
.................+....+.... ....+....... ....+..+++|+|+|+|++|..++.+
T Consensus 144 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~P~l~i~G~~D~~~~~~ 212 (255)
T PRK10673 144 -QAAAIMRQHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIV----------GWEKIPAWPHPALFIRGGNSPYVTEA 212 (255)
T ss_pred -HHHHHHHHhcCCHHHHHHHHhcCCcceeEeeHHHHHHhHHHHh----------CCcccCCCCCCeEEEECCCCCCCCHH
Confidence 000000000001111111111110000 000111110000 01123567899999999999999999
Q ss_pred hHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 415 CSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 415 ~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
.++.+.+.+|++++++++++||+++. ++|+++++.|.+||++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~gH~~~~-~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 213 YRDDLLAQFPQARAHVIAGAGHWVHA-EKPDAVLRAIRRYLND 254 (255)
T ss_pred HHHHHHHhCCCcEEEEeCCCCCeeec-cCHHHHHHHHHHHHhc
Confidence 99999999999999999999999997 9999999999999975
|
|
| >KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=226.02 Aligned_cols=266 Identities=18% Similarity=0.211 Sum_probs=167.5
Q ss_pred cCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCC-CCCCHHHHHHHHHHHHhcccCCceEE
Q 012188 178 SSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD-SLYTVREHLDMIEKSVIEPNKVKSFH 256 (468)
Q Consensus 178 ~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~-~~~t~~~~~~di~~~l~~~l~~~~i~ 256 (468)
.+++|.|+++||++.+++.|+..++.|+ .+||+|+|+|+||+|.|+.|.. ..|++..++.|+ ..+++++|.++++
T Consensus 41 ~~~gP~illlHGfPe~wyswr~q~~~la---~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di-~~lld~Lg~~k~~ 116 (322)
T KOG4178|consen 41 PGDGPIVLLLHGFPESWYSWRHQIPGLA---SRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDI-VALLDHLGLKKAF 116 (322)
T ss_pred CCCCCEEEEEccCCccchhhhhhhhhhh---hcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHH-HHHHHHhccceeE
Confidence 4568999999999999887777888888 5779999999999999999988 889999999999 6999999999999
Q ss_pred EEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchh---------hhhhhhHHHHHH-
Q 012188 257 IVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLI---------AFGASMACWYEH- 326 (468)
Q Consensus 257 lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~- 326 (468)
++||+||+++|+.+|..+|++|+++|.++.+... +... ........-....+... .+..........
T Consensus 117 lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~-p~~~--~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~~~ 193 (322)
T KOG4178|consen 117 LVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPN-PKLK--PLDSSKAIFGKSYYICLFQEPGKPETELSKDDTEMLVKT 193 (322)
T ss_pred EEeccchhHHHHHHHHhChhhcceEEEecCCCCC-cccc--hhhhhccccCccceeEeccccCcchhhhccchhHHhHHh
Confidence 9999999999999999999999999999977651 1110 11111111111111100 000000000000
Q ss_pred -HhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEee
Q 012188 327 -ISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHG 405 (468)
Q Consensus 327 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G 405 (468)
..+.............+. ..+++...++.+. ..+.............++... .+ .....+.++++|+++++|
T Consensus 194 ~~~~~~~~~~~~~~~~~~~-~~w~t~edi~~~~-~~f~~~g~~gplNyyrn~~r~----w~-a~~~~~~~i~iPv~fi~G 266 (322)
T KOG4178|consen 194 FRTRKTPGPLIVPKQPNEN-PLWLTEEDIAFYV-SKFQIDGFTGPLNYYRNFRRN----WE-AAPWALAKITIPVLFIWG 266 (322)
T ss_pred hhccccCCccccCCCCCCc-cchhhHHHHHHHH-hccccccccccchhhHHHhhC----ch-hccccccccccceEEEEe
Confidence 000000000000000000 1111222211111 111111111111111111111 11 112234688999999999
Q ss_pred CCCCccChh-hHHHHHHhCCCC-eEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 406 EDDELIPVE-CSYNVQRKIPRA-RVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 406 ~~D~~vp~~-~~~~l~~~~p~~-~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
+.|.+.+.. ....+.+.+|+. +.++++|+||++++ |+|+++++++.+|+++.
T Consensus 267 ~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqq-e~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 267 DLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQ-EKPQEVNQAILGFINSF 320 (322)
T ss_pred cCcccccchhHHHHHHHhhccccceEEecCCcccccc-cCHHHHHHHHHHHHHhh
Confidence 999998876 455566667877 78899999999997 99999999999999874
|
|
| >PLN02578 hydrolase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-27 Score=234.00 Aligned_cols=276 Identities=17% Similarity=0.220 Sum_probs=167.4
Q ss_pred CCCceeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHh
Q 012188 168 DCDCKFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVI 247 (468)
Q Consensus 168 d~~~~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~ 247 (468)
++..++|...+ ++|+|||+||++++...|..+++.|+ ++|+|+++|+||||.|+++. ..|+..++++++ ..++
T Consensus 74 ~~~~i~Y~~~g-~g~~vvliHG~~~~~~~w~~~~~~l~----~~~~v~~~D~~G~G~S~~~~-~~~~~~~~a~~l-~~~i 146 (354)
T PLN02578 74 RGHKIHYVVQG-EGLPIVLIHGFGASAFHWRYNIPELA----KKYKVYALDLLGFGWSDKAL-IEYDAMVWRDQV-ADFV 146 (354)
T ss_pred CCEEEEEEEcC-CCCeEEEECCCCCCHHHHHHHHHHHh----cCCEEEEECCCCCCCCCCcc-cccCHHHHHHHH-HHHH
Confidence 45556666644 67899999999987776667888887 78999999999999998765 358999999999 6888
Q ss_pred cccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHH
Q 012188 248 EPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHI 327 (468)
Q Consensus 248 ~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (468)
+.++.++++++||||||++++.+|.++|++|+++|+++++............... ......... +......+....
T Consensus 147 ~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~ 222 (354)
T PLN02578 147 KEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIV---VEETVLTRF-VVKPLKEWFQRV 222 (354)
T ss_pred HHhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccc---cccchhhHH-HhHHHHHHHHHH
Confidence 8888899999999999999999999999999999999875432111100000000 000000000 000000000000
Q ss_pred hhHHHHHhhccchhHHHH-HHHHhh-hHHHHHhhhccccc-cchhHHhhHhHHHhccc-ccccchHHHhhccCCCcEEEE
Q 012188 328 SRTICLLICKNHRVWEFL-AKLVTR-NRIRTFLLEGFFCH-THNAAWHTLHNIICGTA-NKLDGYLDAVRNHVKCDVNVF 403 (468)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~PvLii 403 (468)
...............+.. ...+.. .....++.+.+... ............+.... ........+.+.++++|+++|
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI 302 (354)
T PLN02578 223 VLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLL 302 (354)
T ss_pred HHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEE
Confidence 000000000000000000 000000 00011111111000 00000111111110000 001122345567899999999
Q ss_pred eeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHh
Q 012188 404 HGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWR 456 (468)
Q Consensus 404 ~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~ 456 (468)
+|++|.++|.+.++.+.+.+|+++++++ ++||+++. |+|+++++.|.+|++
T Consensus 303 ~G~~D~~v~~~~~~~l~~~~p~a~l~~i-~~GH~~~~-e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 303 WGDLDPWVGPAKAEKIKAFYPDTTLVNL-QAGHCPHD-EVPEQVNKALLEWLS 353 (354)
T ss_pred EeCCCCCCCHHHHHHHHHhCCCCEEEEe-CCCCCccc-cCHHHHHHHHHHHHh
Confidence 9999999999999999999999999999 58999997 999999999999995
|
|
| >TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=227.65 Aligned_cols=263 Identities=16% Similarity=0.183 Sum_probs=165.3
Q ss_pred CCCceeEEEecC-CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 012188 168 DCDCKFCTCWSS-SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSV 246 (468)
Q Consensus 168 d~~~~~~~~~~~-~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l 246 (468)
++..+++...++ ++|+|||+||++++...+..+.+.|+ ++|+|+++|+||||.|+.+....++++++++++ ..+
T Consensus 14 ~~~~~~~~~~g~~~~~~vv~~hG~~~~~~~~~~~~~~l~----~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l-~~~ 88 (278)
T TIGR03056 14 GPFHWHVQDMGPTAGPLLLLLHGTGASTHSWRDLMPPLA----RSFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDL-SAL 88 (278)
T ss_pred CCEEEEEEecCCCCCCeEEEEcCCCCCHHHHHHHHHHHh----hCcEEEeecCCCCCCCCCccccCCCHHHHHHHH-HHH
Confidence 444455666554 36899999999887766667888887 789999999999999987765568999999999 689
Q ss_pred hcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchh-hHHHHHhhcCCCCCchhhhhhhhHHHHH
Q 012188 247 IEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQA-SQYVMRKVAPRRVWPLIAFGASMACWYE 325 (468)
Q Consensus 247 ~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (468)
+++++.++++++||||||.+++.+|.++|++++++|++++........... ................. .....
T Consensus 89 i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 162 (278)
T TIGR03056 89 CAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPM------MSRGA 162 (278)
T ss_pred HHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhcccchHH------HHhhc
Confidence 999998999999999999999999999999999999998765432111000 00000000000000000 00000
Q ss_pred HHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEee
Q 012188 326 HISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHG 405 (468)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G 405 (468)
............... ........ ......... ............. . .......++++++|+++|+|
T Consensus 163 ~~~~~~~~~~~~~~~-------~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~--~-~~~~~~~~~~i~~P~lii~g 228 (278)
T TIGR03056 163 ADQQRVERLIRDTGS-------LLDKAGMT-YYGRLIRSP---AHVDGALSMMAQW--D-LAPLNRDLPRITIPLHLIAG 228 (278)
T ss_pred ccCcchhHHhhcccc-------ccccchhh-HHHHhhcCc---hhhhHHHHHhhcc--c-ccchhhhcccCCCCEEEEEe
Confidence 000000000000000 00000000 000000000 0000000000000 0 01112335678999999999
Q ss_pred CCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHh
Q 012188 406 EDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWR 456 (468)
Q Consensus 406 ~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~ 456 (468)
++|.++|.+.++.+.+.+|++++++++++||+++. +.|+++++.|.+|++
T Consensus 229 ~~D~~vp~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 229 EEDKAVPPDESKRAATRVPTATLHVVPGGGHLVHE-EQADGVVGLILQAAE 278 (278)
T ss_pred CCCcccCHHHHHHHHHhccCCeEEEECCCCCcccc-cCHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999997 899999999999984
|
Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity. |
| >TIGR03611 RutD pyrimidine utilization protein D | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.3e-28 Score=225.89 Aligned_cols=245 Identities=18% Similarity=0.265 Sum_probs=160.0
Q ss_pred CCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceEEEE
Q 012188 179 SSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIV 258 (468)
Q Consensus 179 ~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i~lv 258 (468)
+++|+|||+||++++..+|..+++.|. ++|+|+++|+||||.|..+....++++++++++ ..++++++.++++++
T Consensus 11 ~~~~~iv~lhG~~~~~~~~~~~~~~l~----~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~l~ 85 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGSYWAPQLDVLT----QRFHVVTYDHRGTGRSPGELPPGYSIAHMADDV-LQLLDALNIERFHFV 85 (257)
T ss_pred CCCCEEEEEcCCCcchhHHHHHHHHHH----hccEEEEEcCCCCCCCCCCCcccCCHHHHHHHH-HHHHHHhCCCcEEEE
Confidence 357899999999988776666777777 789999999999999987665668999999999 689999999999999
Q ss_pred EEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHHhhcc
Q 012188 259 AHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKN 338 (468)
Q Consensus 259 GhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (468)
||||||.+++.++.++|+.++++|++++.....+............+.. ..... +......+ ....
T Consensus 86 G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~-----------~~~~ 151 (257)
T TIGR03611 86 GHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQH-AGPEA--YVHAQALF-----------LYPA 151 (257)
T ss_pred EechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhc-cCcch--hhhhhhhh-----------hccc
Confidence 9999999999999999999999999987543321110000000000000 00000 00000000 0000
Q ss_pred chhHHHHHHHHhhhHHHHHhhhcccccc-chhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChhhHH
Q 012188 339 HRVWEFLAKLVTRNRIRTFLLEGFFCHT-HNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSY 417 (468)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~ 417 (468)
....+.. ....... ........ .......... .. .......+.++++|+++++|++|.++|++.++
T Consensus 152 ~~~~~~~-~~~~~~~-----~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~ 218 (257)
T TIGR03611 152 DWISENA-ARLAADE-----AHALAHFPGKANVLRRINA-LE------AFDVSARLDRIQHPVLLIANRDDMLVPYTQSL 218 (257)
T ss_pred cHhhccc-hhhhhhh-----hhcccccCccHHHHHHHHH-HH------cCCcHHHhcccCccEEEEecCcCcccCHHHHH
Confidence 0000000 0000000 00000000 0000000000 00 01122345678999999999999999999999
Q ss_pred HHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHh
Q 012188 418 NVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWR 456 (468)
Q Consensus 418 ~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~ 456 (468)
++.+.+|+++++.++++||++++ ++|+++++.|.+||+
T Consensus 219 ~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 219 RLAAALPNAQLKLLPYGGHASNV-TDPETFNRALLDFLK 256 (257)
T ss_pred HHHHhcCCceEEEECCCCCCccc-cCHHHHHHHHHHHhc
Confidence 99999999999999999999987 899999999999995
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. |
| >PRK07581 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-27 Score=233.39 Aligned_cols=285 Identities=13% Similarity=0.107 Sum_probs=158.2
Q ss_pred CCCceeEEEecC---CC-CeEEEEecCCCCccchhhhh---hhccccCCCcceEEEECCCCCCCCCCCCC--CCCCHHH-
Q 012188 168 DCDCKFCTCWSS---SS-RDTLFVKTQGPSAFWTETLF---PNFSSASKSTYRLFAIDLLGFGRSPKPTD--SLYTVRE- 237 (468)
Q Consensus 168 d~~~~~~~~~~~---~~-p~vl~lHG~g~s~~~~~~~~---~~L~~~~~~gy~Via~D~~G~G~S~~~~~--~~~t~~~- 237 (468)
++..++|..+++ ++ |+||++||++++..++..++ +.|. .++|+||++|+||||.|+.+.. ..+++++
T Consensus 24 ~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~---~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 100 (339)
T PRK07581 24 PDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALD---PEKYFIIIPNMFGNGLSSSPSNTPAPFNAARF 100 (339)
T ss_pred CCceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccC---cCceEEEEecCCCCCCCCCCCCCCCCCCCCCC
Confidence 556677887764 23 45666666665555543333 2443 3689999999999999976542 1344332
Q ss_pred ----HHHHHH---HHHhcccCCce-EEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCC
Q 012188 238 ----HLDMIE---KSVIEPNKVKS-FHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRR 309 (468)
Q Consensus 238 ----~~~di~---~~l~~~l~~~~-i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~ 309 (468)
+++++. ..+++++++++ ++||||||||++|+.+|.+||++|+++|++++.....+............+....
T Consensus 101 ~~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~ 180 (339)
T PRK07581 101 PHVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTADP 180 (339)
T ss_pred CceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHhCC
Confidence 344441 23778899999 5799999999999999999999999999998654321111000111111111111
Q ss_pred CCchhhhhhhhHHHHHHHhhHHHHHhhccchhHHHH-HHHH---h-hhHHHHHhhhccccccchhHHhhHhHHHhc-c-c
Q 012188 310 VWPLIAFGASMACWYEHISRTICLLICKNHRVWEFL-AKLV---T-RNRIRTFLLEGFFCHTHNAAWHTLHNIICG-T-A 382 (468)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~ 382 (468)
.|........................ ......... .+.. . ........ ...........+......... . .
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~ 258 (339)
T PRK07581 181 AFNGGWYAEPPERGLRAHARVYAGWG-FSQAFYRQELWRAMGYASLEDFLVGFW-EGNFLPRDPNNLLAMLWTWQRGDIS 258 (339)
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHH-hHHHHHHhhhccccChhhHHHHHHHHH-HHhhcccCcccHHHHHHHhhhcccc
Confidence 11100000000000000000000000 000000000 0000 0 00000111 111000011111111111110 0 0
Q ss_pred ccc--cchHHHhhccCCCcEEEEeeCCCCccChhhHHHHHHhCCCCeEEEecC-CCccccccCcHHHHHHHHHHHHhhc
Q 012188 383 NKL--DGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEK-KDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 383 ~~~--~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~-~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
... .......+.++++|+|+|+|++|.++|++.++.+.+.+|+++++++++ +||+.++ ++++.+++.|.+||++-
T Consensus 259 ~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~a~l~~i~~~~GH~~~~-~~~~~~~~~~~~~~~~~ 336 (339)
T PRK07581 259 RNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIPNAELRPIESIWGHLAGF-GQNPADIAFIDAALKEL 336 (339)
T ss_pred cCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEeCCCCCccccc-cCcHHHHHHHHHHHHHH
Confidence 010 113445567899999999999999999999999999999999999999 9999997 99999999999999863
|
|
| >PLN02385 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-27 Score=234.14 Aligned_cols=256 Identities=17% Similarity=0.242 Sum_probs=163.4
Q ss_pred cCCCCceeEEEecC----CCCeEEEEecCCCCc-cchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHH
Q 012188 166 WSDCDCKFCTCWSS----SSRDTLFVKTQGPSA-FWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLD 240 (468)
Q Consensus 166 ~~d~~~~~~~~~~~----~~p~vl~lHG~g~s~-~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~ 240 (468)
.+||..+++..|.+ .+++|||+||++++. .|+..+.+.|+ +.||+|+++|+||||.|+++.....+++++++
T Consensus 68 ~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~---~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~ 144 (349)
T PLN02385 68 NSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIA---SSGYGVFAMDYPGFGLSEGLHGYIPSFDDLVD 144 (349)
T ss_pred cCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHH---hCCCEEEEecCCCCCCCCCCCCCcCCHHHHHH
Confidence 35788899999964 357899999998765 45566777776 46999999999999999876544468899999
Q ss_pred HHHHHHhcccCC------ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCc--hhhHHHHH---hhcCCC
Q 012188 241 MIEKSVIEPNKV------KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGA--QASQYVMR---KVAPRR 309 (468)
Q Consensus 241 di~~~l~~~l~~------~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~--~~~~~~~~---~~~~~~ 309 (468)
|+ ..+++.+.. .+++|+||||||.+++.++.++|++++++|+++|......... ........ ...+..
T Consensus 145 dv-~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 223 (349)
T PLN02385 145 DV-IEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQILILLANLLPKA 223 (349)
T ss_pred HH-HHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHHHHHHHHHHCCCc
Confidence 98 466655432 3799999999999999999999999999999998653211110 00001110 000000
Q ss_pred -CCchhhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccch
Q 012188 310 -VWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGY 388 (468)
Q Consensus 310 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (468)
..+...+ .+...+.........+....+ ............+.. ...
T Consensus 224 ~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~-----~~~ 270 (349)
T PLN02385 224 KLVPQKDL-------------------------AELAFRDLKKRKMAEYNVIAY---KDKPRLRTAVELLRT-----TQE 270 (349)
T ss_pred eecCCCcc-------------------------ccccccCHHHHHHhhcCccee---CCCcchHHHHHHHHH-----HHH
Confidence 0000000 000000000000000000000 000000000011100 012
Q ss_pred HHHhhccCCCcEEEEeeCCCCccChhhHHHHHHhC--CCCeEEEecCCCccccccCcHHH----HHHHHHHHHhhcC
Q 012188 389 LDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKI--PRARVKVIEKKDHITIVVGRQKT----FARELEEIWRSSS 459 (468)
Q Consensus 389 ~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~--p~~~l~~i~~~gH~~~~~e~p~~----~~~~i~~fl~~~~ 459 (468)
....+.++++|+|+|+|++|.++|++.++.+++.+ +++++++++++||+++. ++|++ +.+.|.+||++..
T Consensus 271 ~~~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~-e~p~~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 271 IEMQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILE-GEPDEMIFQVLDDIISWLDSHS 346 (349)
T ss_pred HHHhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeeccc-CCChhhHHHHHHHHHHHHHHhc
Confidence 23345788999999999999999999999999987 56899999999999986 78876 8888999998754
|
|
| >PLN03084 alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.8e-27 Score=228.06 Aligned_cols=264 Identities=17% Similarity=0.202 Sum_probs=165.6
Q ss_pred CCCCceeEEEecC-CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCC---CCCCHHHHHHHH
Q 012188 167 SDCDCKFCTCWSS-SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD---SLYTVREHLDMI 242 (468)
Q Consensus 167 ~d~~~~~~~~~~~-~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~---~~~t~~~~~~di 242 (468)
.++..++|..+++ ++|+|||+||++.+...|..+++.|+ ++|+|+++|+||||.|+.+.. ..++++++++++
T Consensus 112 ~~~~~~~y~~~G~~~~~~ivllHG~~~~~~~w~~~~~~L~----~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l 187 (383)
T PLN03084 112 SDLFRWFCVESGSNNNPPVLLIHGFPSQAYSYRKVLPVLS----KNYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSL 187 (383)
T ss_pred CCceEEEEEecCCCCCCeEEEECCCCCCHHHHHHHHHHHh----cCCEEEEECCCCCCCCCCCcccccccCCHHHHHHHH
Confidence 3556677777764 47899999999987765566888887 789999999999999987653 258999999999
Q ss_pred HHHHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHH
Q 012188 243 EKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMAC 322 (468)
Q Consensus 243 ~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (468)
..+++++++++++|+|||+||.+++.+|.++|++|+++|+++++........ ......... .....
T Consensus 188 -~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~---p~~l~~~~~----------~l~~~ 253 (383)
T PLN03084 188 -ESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKL---PSTLSEFSN----------FLLGE 253 (383)
T ss_pred -HHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccc---hHHHHHHHH----------HHhhh
Confidence 6999999999999999999999999999999999999999998753211100 000000000 00000
Q ss_pred HHHHHh-hHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccc-hhHHhhHhHHHhcccccccchHHHhh--ccCCC
Q 012188 323 WYEHIS-RTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTH-NAAWHTLHNIICGTANKLDGYLDAVR--NHVKC 398 (468)
Q Consensus 323 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~ 398 (468)
+..... +.....+...... ....... ......+..... ...+..+...+..........+...+ .++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~------~~~~e~~-~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~v 326 (383)
T PLN03084 254 IFSQDPLRASDKALTSCGPY------AMKEDDA-MVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKT 326 (383)
T ss_pred hhhcchHHHHhhhhcccCcc------CCCHHHH-HHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCC
Confidence 000000 0000000000000 0000000 000000000000 00011110111000000000111111 35799
Q ss_pred cEEEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 399 DVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 399 PvLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
|+++++|++|.+++.+.++.+.+. +++++++++++||+++. |+|+++++.|.+|+.+
T Consensus 327 PvLiI~G~~D~~v~~~~~~~~a~~-~~a~l~vIp~aGH~~~~-E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 327 PITVCWGLRDRWLNYDGVEDFCKS-SQHKLIELPMAGHHVQE-DCGEELGGIISGILSK 383 (383)
T ss_pred CEEEEeeCCCCCcCHHHHHHHHHh-cCCeEEEECCCCCCcch-hCHHHHHHHHHHHhhC
Confidence 999999999999999988888887 58999999999999997 9999999999999863
|
|
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-27 Score=232.34 Aligned_cols=269 Identities=16% Similarity=0.196 Sum_probs=158.7
Q ss_pred CCCceeEEEecCCCCeEEEEecCCCCcc------------chhhhhh---hccccCCCcceEEEECCCCCCCCCCCCCCC
Q 012188 168 DCDCKFCTCWSSSSRDTLFVKTQGPSAF------------WTETLFP---NFSSASKSTYRLFAIDLLGFGRSPKPTDSL 232 (468)
Q Consensus 168 d~~~~~~~~~~~~~p~vl~lHG~g~s~~------------~~~~~~~---~L~~~~~~gy~Via~D~~G~G~S~~~~~~~ 232 (468)
++..++|..++++++|+||+||+.++.. ||..+++ .|. .++|+||++|+||||.|.. ..
T Consensus 44 ~~~~l~y~~~G~~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~---~~~~~Vi~~Dl~G~g~s~~---~~ 117 (343)
T PRK08775 44 EDLRLRYELIGPAGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALD---PARFRLLAFDFIGADGSLD---VP 117 (343)
T ss_pred CCceEEEEEeccCCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccC---ccccEEEEEeCCCCCCCCC---CC
Confidence 4455778877765666788877665443 6666665 341 2689999999999998842 24
Q ss_pred CCHHHHHHHHHHHHhcccCCceE-EEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhc-CCCC
Q 012188 233 YTVREHLDMIEKSVIEPNKVKSF-HIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVA-PRRV 310 (468)
Q Consensus 233 ~t~~~~~~di~~~l~~~l~~~~i-~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~-~~~~ 310 (468)
++..++++++ .++++++++++. +++||||||++|+.+|.++|++|+++|++++.....+.. .......+... ....
T Consensus 118 ~~~~~~a~dl-~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~-~~~~~~~~~~~~~~~~ 195 (343)
T PRK08775 118 IDTADQADAI-ALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYA-AAWRALQRRAVALGQL 195 (343)
T ss_pred CCHHHHHHHH-HHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHH-HHHHHHHHHHHHcCCC
Confidence 7889999999 699999999764 799999999999999999999999999999764321110 00010101100 0000
Q ss_pred CchhhhhhhhHHHHHH--H--hhHHHHHhhccch-----hHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcc
Q 012188 311 WPLIAFGASMACWYEH--I--SRTICLLICKNHR-----VWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGT 381 (468)
Q Consensus 311 ~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (468)
......+......... . .......+..... ............. ...........+.........
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------~~~~~~~~~~~~~~~~~~~~~- 268 (343)
T PRK08775 196 QCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAG------AQYVARTPVNAYLRLSESIDL- 268 (343)
T ss_pred CCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHH------HHHHHhcChhHHHHHHHHHhh-
Confidence 0000000000000000 0 0000000000000 0000000000000 000000000000000000000
Q ss_pred cccccchHHHhhccCCCcEEEEeeCCCCccChhhHHHHHHhC-CCCeEEEecC-CCccccccCcHHHHHHHHHHHHhhcC
Q 012188 382 ANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKI-PRARVKVIEK-KDHITIVVGRQKTFARELEEIWRSSS 459 (468)
Q Consensus 382 ~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~-p~~~l~~i~~-~gH~~~~~e~p~~~~~~i~~fl~~~~ 459 (468)
....+.++++|+|+|+|++|.++|++..+++.+.+ |+++++++++ +||++++ |+|++|++.|.+||++..
T Consensus 269 -------~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~l-E~Pe~~~~~l~~FL~~~~ 340 (343)
T PRK08775 269 -------HRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFL-KETDRIDAILTTALRSTG 340 (343)
T ss_pred -------cCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHh-cCHHHHHHHHHHHHHhcc
Confidence 01114678999999999999999999999999888 7999999985 9999998 999999999999997653
|
|
| >TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.9e-27 Score=230.11 Aligned_cols=284 Identities=15% Similarity=0.180 Sum_probs=164.8
Q ss_pred CCCceeEEEecC----CCCeEEEEecCCCCc--c---------chhhhhhhccccCCCcceEEEECCCC--CCCCCCC--
Q 012188 168 DCDCKFCTCWSS----SSRDTLFVKTQGPSA--F---------WTETLFPNFSSASKSTYRLFAIDLLG--FGRSPKP-- 228 (468)
Q Consensus 168 d~~~~~~~~~~~----~~p~vl~lHG~g~s~--~---------~~~~~~~~L~~~~~~gy~Via~D~~G--~G~S~~~-- 228 (468)
++..++|..|++ ++++|||+||++++. . ||..++..-..++.++|+|+++|+|| ||.|...
T Consensus 14 ~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~ 93 (351)
T TIGR01392 14 SDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSI 93 (351)
T ss_pred CCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCC
Confidence 566789999974 468999999998854 2 55555421111224899999999999 5655321
Q ss_pred --CC-------CCCCHHHHHHHHHHHHhcccCCce-EEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhh
Q 012188 229 --TD-------SLYTVREHLDMIEKSVIEPNKVKS-FHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQAS 298 (468)
Q Consensus 229 --~~-------~~~t~~~~~~di~~~l~~~l~~~~-i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~ 298 (468)
.+ ..++++++++++ ..+++++++++ ++++||||||++++.+|.++|++|+++|++++............
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 172 (351)
T TIGR01392 94 NPGGRPYGSDFPLITIRDDVKAQ-KLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCIAFN 172 (351)
T ss_pred CCCCCcCCCCCCCCcHHHHHHHH-HHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHHHHH
Confidence 11 247899999999 69999999998 99999999999999999999999999999998654322110101
Q ss_pred HHHHHhhcCCCCCchhhhhhh-hHHHHHHHhhHHHHHhhccchhHHHHHHHHhh------------------hHHHHHhh
Q 012188 299 QYVMRKVAPRRVWPLIAFGAS-MACWYEHISRTICLLICKNHRVWEFLAKLVTR------------------NRIRTFLL 359 (468)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~ 359 (468)
......+.....+........ .........+......... .+.+.+.+.. ........
T Consensus 173 ~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~---~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (351)
T TIGR01392 173 EVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRS---EESMAERFGRAPQSGESPASGFDTRFQVESYLRYQG 249 (351)
T ss_pred HHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCC---HHHHHHHhCcCcccccccccccCccchHHHHHHHHH
Confidence 111111111111110000000 0000000000000000000 0000000000 00000000
Q ss_pred hccccccchhHHhhHhHHHhcccc-cccchHHHhhccCCCcEEEEeeCCCCccChhhHHHHHHhCCCCeEE-----EecC
Q 012188 360 EGFFCHTHNAAWHTLHNIICGTAN-KLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVK-----VIEK 433 (468)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~~~l~-----~i~~ 433 (468)
..+........+......+..... .......+.+++|++|+|+|+|++|.++|++.++.+.+.+|+++++ ++++
T Consensus 250 ~~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~ 329 (351)
T TIGR01392 250 DKFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIESP 329 (351)
T ss_pred HHHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeCCC
Confidence 000000001111111111111100 0002345567899999999999999999999999999999998765 5678
Q ss_pred CCccccccCcHHHHHHHHHHHHh
Q 012188 434 KDHITIVVGRQKTFARELEEIWR 456 (468)
Q Consensus 434 ~gH~~~~~e~p~~~~~~i~~fl~ 456 (468)
+||++++ ++|++|++.|.+||+
T Consensus 330 ~GH~~~l-e~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 330 YGHDAFL-VETDQVEELIRGFLR 351 (351)
T ss_pred CCcchhh-cCHHHHHHHHHHHhC
Confidence 9999998 999999999999984
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. |
| >PHA02857 monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.7e-27 Score=221.53 Aligned_cols=250 Identities=15% Similarity=0.216 Sum_probs=158.2
Q ss_pred CCCCceeEEEecCC---CCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHH
Q 012188 167 SDCDCKFCTCWSSS---SRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIE 243 (468)
Q Consensus 167 ~d~~~~~~~~~~~~---~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~ 243 (468)
+||..+.++.|.++ ++.|+++||++.++.++..+.+.|. +.||+|+++|+||||.|++......++.++++|+.
T Consensus 8 ~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l~---~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~~ 84 (276)
T PHA02857 8 LDNDYIYCKYWKPITYPKALVFISHGAGEHSGRYEELAENIS---SLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDVV 84 (276)
T ss_pred CCCCEEEEEeccCCCCCCEEEEEeCCCccccchHHHHHHHHH---hCCCEEEEccCCCCCCCCCccCCcCCHHHHHHHHH
Confidence 47788899988553 4456677999988888878888886 46999999999999999764433346666676663
Q ss_pred HHHhc----ccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHh----hcCCCCCchhh
Q 012188 244 KSVIE----PNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRK----VAPRRVWPLIA 315 (468)
Q Consensus 244 ~~l~~----~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 315 (468)
..++ ..+.++++++||||||.+|+.+|.++|++++++|+++|....... .....+... ..+......
T Consensus 85 -~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-- 159 (276)
T PHA02857 85 -QHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAV--PRLNLLAAKLMGIFYPNKIVGK-- 159 (276)
T ss_pred -HHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccc--cHHHHHHHHHHHHhCCCCccCC--
Confidence 4333 244568999999999999999999999999999999986542110 000000000 000000000
Q ss_pred hhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhcccc-ccchhHHhhHhHHHhcccccccchHHHhhc
Q 012188 316 FGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFC-HTHNAAWHTLHNIICGTANKLDGYLDAVRN 394 (468)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (468)
....+. . ....+ ...+....+.. ......+. ..... ........+.
T Consensus 160 ---~~~~~~-----------~--~~~~~----------~~~~~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~l~ 206 (276)
T PHA02857 160 ---LCPESV-----------S--RDMDE----------VYKYQYDPLVNHEKIKAGFA--SQVLK-----ATNKVRKIIP 206 (276)
T ss_pred ---CCHhhc-----------c--CCHHH----------HHHHhcCCCccCCCccHHHH--HHHHH-----HHHHHHHhcc
Confidence 000000 0 00000 00000000000 00000000 00000 0112233457
Q ss_pred cCCCcEEEEeeCCCCccChhhHHHHHHhC-CCCeEEEecCCCccccccCc---HHHHHHHHHHHHhhc
Q 012188 395 HVKCDVNVFHGEDDELIPVECSYNVQRKI-PRARVKVIEKKDHITIVVGR---QKTFARELEEIWRSS 458 (468)
Q Consensus 395 ~i~~PvLii~G~~D~~vp~~~~~~l~~~~-p~~~l~~i~~~gH~~~~~e~---p~~~~~~i~~fl~~~ 458 (468)
++++|+|+++|++|.++|++.++++.+.+ +++++++++++||.++. |+ .+++.+.+.+||++.
T Consensus 207 ~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~-e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 207 KIKTPILILQGTNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLHK-ETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred cCCCCEEEEecCCCCcCChHHHHHHHHHccCCceEEEeCCCcccccC-CchhHHHHHHHHHHHHHHHh
Confidence 88999999999999999999999999887 57899999999999997 54 467999999999874
|
|
| >TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.2e-27 Score=218.28 Aligned_cols=248 Identities=17% Similarity=0.226 Sum_probs=161.8
Q ss_pred eeEEEecC--CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcc
Q 012188 172 KFCTCWSS--SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEP 249 (468)
Q Consensus 172 ~~~~~~~~--~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~ 249 (468)
++|+.+++ ++|+|||+||++.+...+..+++.|. ++|+|+++|+||||.|+.+. ..++++++++++ ..+++.
T Consensus 2 ~~~~~~g~~~~~~~li~~hg~~~~~~~~~~~~~~l~----~~~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~~-~~~i~~ 75 (251)
T TIGR02427 2 LHYRLDGAADGAPVLVFINSLGTDLRMWDPVLPALT----PDFRVLRYDKRGHGLSDAPE-GPYSIEDLADDV-LALLDH 75 (251)
T ss_pred ceEEeecCCCCCCeEEEEcCcccchhhHHHHHHHhh----cccEEEEecCCCCCCCCCCC-CCCCHHHHHHHH-HHHHHH
Confidence 45666654 46889999999887776666778877 89999999999999997554 457999999999 689999
Q ss_pred cCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhh
Q 012188 250 NKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISR 329 (468)
Q Consensus 250 l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (468)
++.++++++||||||.+++.+|.++|++++++|+++++....... ............ . ...... .
T Consensus 76 ~~~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~--~~~~~~~~~~~~---~-------~~~~~~---~ 140 (251)
T TIGR02427 76 LGIERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPE--SWNARIAAVRAE---G-------LAALAD---A 140 (251)
T ss_pred hCCCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchh--hHHHHHhhhhhc---c-------HHHHHH---H
Confidence 998999999999999999999999999999999998754321111 000000000000 0 000000 0
Q ss_pred HHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCC
Q 012188 330 TICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDE 409 (468)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~ 409 (468)
.....+.......... ........ +.... ...+....... ........+.++++|+++++|++|.
T Consensus 141 ~~~~~~~~~~~~~~~~----~~~~~~~~----~~~~~-~~~~~~~~~~~------~~~~~~~~~~~~~~Pvlii~g~~D~ 205 (251)
T TIGR02427 141 VLERWFTPGFREAHPA----RLDLYRNM----LVRQP-PDGYAGCCAAI------RDADFRDRLGAIAVPTLCIAGDQDG 205 (251)
T ss_pred HHHHHcccccccCChH----HHHHHHHH----HHhcC-HHHHHHHHHHH------hcccHHHHhhhcCCCeEEEEeccCC
Confidence 0000000000000000 00000000 00000 00000000000 0112233456789999999999999
Q ss_pred ccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHh
Q 012188 410 LIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWR 456 (468)
Q Consensus 410 ~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~ 456 (468)
++|.+..+.+.+.+++.++++++++||+.++ ++|+++.+.+.+|++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 206 STPPELVREIADLVPGARFAEIRGAGHIPCV-EQPEAFNAALRDFLR 251 (251)
T ss_pred cCChHHHHHHHHhCCCceEEEECCCCCcccc-cChHHHHHHHHHHhC
Confidence 9999999999999999999999999999997 899999999999984
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. |
| >KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-26 Score=213.40 Aligned_cols=264 Identities=15% Similarity=0.207 Sum_probs=160.0
Q ss_pred CCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCC---CCCCHHHHHHHHHHHHhcccCCceE
Q 012188 179 SSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD---SLYTVREHLDMIEKSVIEPNKVKSF 255 (468)
Q Consensus 179 ~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~---~~~t~~~~~~di~~~l~~~l~~~~i 255 (468)
.++.|+||+||+|.+...+-.-++.|+ +.++|+++|++|+|+|+.|.- .......+++-| .+.....++++.
T Consensus 88 ~~~~plVliHGyGAg~g~f~~Nf~~La----~~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesi-E~WR~~~~L~Km 162 (365)
T KOG4409|consen 88 ANKTPLVLIHGYGAGLGLFFRNFDDLA----KIRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESI-EQWRKKMGLEKM 162 (365)
T ss_pred cCCCcEEEEeccchhHHHHHHhhhhhh----hcCceEEecccCCCCCCCCCCCCCcccchHHHHHHH-HHHHHHcCCcce
Confidence 456899999998876654445778887 799999999999999987763 233456888888 589999999999
Q ss_pred EEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCC-c-----hhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhh
Q 012188 256 HIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKG-A-----QASQYVMRKVAPRRVWPLIAFGASMACWYEHISR 329 (468)
Q Consensus 256 ~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (468)
+|+|||+||++|..||.+||++|+.|||++|..++.... . ....+............++...+.+..+-..+..
T Consensus 163 ilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~ 242 (365)
T KOG4409|consen 163 ILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFNPLALLRLMGPLGPKLVS 242 (365)
T ss_pred eEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhhhhhcCCHHHHHHhccccchHHHh
Confidence 999999999999999999999999999999987764321 0 0012221111111112222222222222111111
Q ss_pred HHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccC--CCcEEEEeeCC
Q 012188 330 TICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHV--KCDVNVFHGED 407 (468)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~PvLii~G~~ 407 (468)
.+.. ............+.+.++....... ....-..+.++........+..+ ..+..+ .+|+++|+|++
T Consensus 243 ~~~~------d~~~k~~~~~~ed~l~~YiY~~n~~--~psgE~~fk~l~~~~g~Ar~Pm~-~r~~~l~~~~pv~fiyG~~ 313 (365)
T KOG4409|consen 243 RLRP------DRFRKFPSLIEEDFLHEYIYHCNAQ--NPSGETAFKNLFEPGGWARRPMI-QRLRELKKDVPVTFIYGDR 313 (365)
T ss_pred hhhH------HHHHhccccchhHHHHHHHHHhcCC--CCcHHHHHHHHHhccchhhhhHH-HHHHhhccCCCEEEEecCc
Confidence 1000 0000000000111112222221111 11111222222222222222222 222333 59999999999
Q ss_pred CCccChhhHHHHHHhC--CCCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 408 DELIPVECSYNVQRKI--PRARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 408 D~~vp~~~~~~l~~~~--p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
|.+ ......++.+.. ..++.++++++||.++. ++|+.|++.+.+++++.
T Consensus 314 dWm-D~~~g~~~~~~~~~~~~~~~~v~~aGHhvyl-Dnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 314 DWM-DKNAGLEVTKSLMKEYVEIIIVPGAGHHVYL-DNPEFFNQIVLEECDKV 364 (365)
T ss_pred ccc-cchhHHHHHHHhhcccceEEEecCCCceeec-CCHHHHHHHHHHHHhcc
Confidence 965 445555555543 35899999999999998 99999999999999763
|
|
| >PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-26 Score=215.19 Aligned_cols=239 Identities=13% Similarity=0.086 Sum_probs=145.4
Q ss_pred CCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceEEEEEE
Q 012188 181 SRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAH 260 (468)
Q Consensus 181 ~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i~lvGh 260 (468)
+|+|||+||++++...|..+++.|. +|+|+++|+||||.|+.+.. .+++++++++ ..++++++.++++++||
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l~-----~~~vi~~D~~G~G~S~~~~~--~~~~~~~~~l-~~~l~~~~~~~~~lvG~ 73 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEALP-----DYPRLYIDLPGHGGSAAISV--DGFADVSRLL-SQTLQSYNILPYWLVGY 73 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHcC-----CCCEEEecCCCCCCCCCccc--cCHHHHHHHH-HHHHHHcCCCCeEEEEE
Confidence 5789999999987776666777664 69999999999999987653 4899999999 69999999999999999
Q ss_pred cccHHHHHHHHHhCCCc-cceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHHhhccc
Q 012188 261 SLGCILALALAVKHPGS-VKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKNH 339 (468)
Q Consensus 261 S~Gg~ial~~a~~~p~~-v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (468)
||||.+++.+|.++|+. |+++++++++....... ....... ....|.............. . .+..
T Consensus 74 S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~---~----~~~~-- 139 (242)
T PRK11126 74 SLGGRIAMYYACQGLAGGLCGLIVEGGNPGLQNAE----ERQARWQ-NDRQWAQRFRQEPLEQVLA---D----WYQQ-- 139 (242)
T ss_pred CHHHHHHHHHHHhCCcccccEEEEeCCCCCCCCHH----HHHHHHh-hhHHHHHHhccCcHHHHHH---H----HHhc--
Confidence 99999999999999765 99999998654221110 0000000 0000000000000000000 0 0000
Q ss_pred hhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChhhHHHH
Q 012188 340 RVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNV 419 (468)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l 419 (468)
.............+... ..... . ......+..............+.++++|+++++|++|..+. .+
T Consensus 140 ----~~~~~~~~~~~~~~~~~-~~~~~-~---~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~ 205 (242)
T PRK11126 140 ----PVFASLNAEQRQQLVAK-RSNNN-G---AAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----AL 205 (242)
T ss_pred ----chhhccCccHHHHHHHh-cccCC-H---HHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HH
Confidence 00000000000000000 00000 0 00111111110011122344567899999999999998652 22
Q ss_pred HHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 420 QRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 420 ~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
.+. +++++++++++||+++. |+|+++++.|.+|+++
T Consensus 206 ~~~-~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 206 AQQ-LALPLHVIPNAGHNAHR-ENPAAFAASLAQILRL 241 (242)
T ss_pred HHH-hcCeEEEeCCCCCchhh-hChHHHHHHHHHHHhh
Confidence 333 38899999999999997 9999999999999975
|
|
| >TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-26 Score=212.04 Aligned_cols=238 Identities=17% Similarity=0.197 Sum_probs=148.2
Q ss_pred CCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceEEEEEE
Q 012188 181 SRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAH 260 (468)
Q Consensus 181 ~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i~lvGh 260 (468)
+|+|||+||++++...|..+.+.|. ++|+|+++|+||||.|+... .++++++++++ ..+++ ++++++||
T Consensus 4 ~~~iv~~HG~~~~~~~~~~~~~~l~----~~~~vi~~d~~G~G~s~~~~--~~~~~~~~~~~-~~~~~----~~~~lvG~ 72 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRCLDEELS----AHFTLHLVDLPGHGRSRGFG--PLSLADAAEAI-AAQAP----DPAIWLGW 72 (245)
T ss_pred CceEEEEcCCCCchhhHHHHHHhhc----cCeEEEEecCCcCccCCCCC--CcCHHHHHHHH-HHhCC----CCeEEEEE
Confidence 4899999999988776667888887 78999999999999997543 46888888877 34432 68999999
Q ss_pred cccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchh---hHHHHHhhcCCCCCchhhhhhhhH-HHHHHHhhHHHHHhh
Q 012188 261 SLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQA---SQYVMRKVAPRRVWPLIAFGASMA-CWYEHISRTICLLIC 336 (468)
Q Consensus 261 S~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 336 (468)
||||.+++.++.++|++++++|++++........... ......... .... .+...+.........
T Consensus 73 S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~ 141 (245)
T TIGR01738 73 SLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQ-----------QQLSDDYQRTIERFLALQTL 141 (245)
T ss_pred cHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHH-----------HHhhhhHHHHHHHHHHHHHh
Confidence 9999999999999999999999998654221110000 000000000 0000 000000000000000
Q ss_pred ccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChhhH
Q 012188 337 KNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECS 416 (468)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~ 416 (468)
....... .... +...+.... ......+...... .........+.++++|+++++|++|.++|++..
T Consensus 142 ~~~~~~~---------~~~~-~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~ 207 (245)
T TIGR01738 142 GTPTARQ---------DARA-LKQTLLARP-TPNVQVLQAGLEI---LATVDLRQPLQNISVPFLRLYGYLDGLVPAKVV 207 (245)
T ss_pred cCCccch---------HHHH-HHHHhhccC-CCCHHHHHHHHHH---hhcccHHHHHhcCCCCEEEEeecCCcccCHHHH
Confidence 0000000 0000 000000000 0000000000000 001122334578899999999999999999999
Q ss_pred HHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHH
Q 012188 417 YNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIW 455 (468)
Q Consensus 417 ~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl 455 (468)
+.+.+.+|++++++++++||++++ ++|+++++.|.+|+
T Consensus 208 ~~~~~~~~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fi 245 (245)
T TIGR01738 208 PYLDKLAPHSELYIFAKAAHAPFL-SHAEAFCALLVAFK 245 (245)
T ss_pred HHHHHhCCCCeEEEeCCCCCCccc-cCHHHHHHHHHhhC
Confidence 999999999999999999999998 99999999999985
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria. |
| >PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-26 Score=211.70 Aligned_cols=226 Identities=25% Similarity=0.387 Sum_probs=151.9
Q ss_pred EEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCC-CCCCHHHHHHHHHHHHhcccCCceEEEEEEcc
Q 012188 184 TLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD-SLYTVREHLDMIEKSVIEPNKVKSFHIVAHSL 262 (468)
Q Consensus 184 vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~-~~~t~~~~~~di~~~l~~~l~~~~i~lvGhS~ 262 (468)
|||+||++++...+..+++.|+ +||+|+++|+||||.|+.+.. ..++++++++++ ..+++.++.++++++|||+
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~----~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l-~~~l~~~~~~~~~lvG~S~ 75 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA----RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDL-AELLDALGIKKVILVGHSM 75 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH----TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHH-HHHHHHTTTSSEEEEEETH
T ss_pred eEEECCCCCCHHHHHHHHHHHh----CCCEEEEEecCCccccccccccCCcchhhhhhhh-hhccccccccccccccccc
Confidence 7999999998877777888887 899999999999999987664 457999999999 6999999999999999999
Q ss_pred cHHHHHHHHHhCCCccceEEEecCCCCCCCCCc-hhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHHhhccchh
Q 012188 263 GCILALALAVKHPGSVKSLTLLAPPYYPVPKGA-QASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKNHRV 341 (468)
Q Consensus 263 Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (468)
||.+++.++.++|++|+++|+++|+........ ....... ..+........... .
T Consensus 76 Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~------~ 131 (228)
T PF12697_consen 76 GGMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFI------------------RRLLAWRSRSLRRL------A 131 (228)
T ss_dssp HHHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHH------------------HHHHHHHHHHHHHH------H
T ss_pred ccccccccccccccccccceeecccccccccccccccchhh------------------hhhhhccccccccc------c
Confidence 999999999999999999999998764310000 0000000 00000000000000 0
Q ss_pred HHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChhhHHHHHH
Q 012188 342 WEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQR 421 (468)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~ 421 (468)
................+.. ....+...+... .........++++++|+++++|++|.+++.+..+.+.+
T Consensus 132 ~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~--~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~ 200 (228)
T PF12697_consen 132 SRFFYRWFDGDEPEDLIRS---------SRRALAEYLRSN--LWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELAD 200 (228)
T ss_dssp HHHHHHHHTHHHHHHHHHH---------HHHHHHHHHHHH--HHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHH
T ss_pred ccccccccccccccccccc---------cccccccccccc--cccccccccccccCCCeEEeecCCCCCCCHHHHHHHHH
Confidence 0000001111111111100 000000000000 11222334457889999999999999999999999999
Q ss_pred hCCCCeEEEecCCCccccccCcHHHHHHH
Q 012188 422 KIPRARVKVIEKKDHITIVVGRQKTFARE 450 (468)
Q Consensus 422 ~~p~~~l~~i~~~gH~~~~~e~p~~~~~~ 450 (468)
.+|++++++++++||++++ ++|+++++.
T Consensus 201 ~~~~~~~~~~~~~gH~~~~-~~p~~~~~a 228 (228)
T PF12697_consen 201 KLPNAELVVIPGAGHFLFL-EQPDEVAEA 228 (228)
T ss_dssp HSTTEEEEEETTSSSTHHH-HSHHHHHHH
T ss_pred HCCCCEEEEECCCCCccHH-HCHHHHhcC
Confidence 9999999999999999998 899999864
|
... |
| >PRK00175 metX homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.5e-26 Score=225.64 Aligned_cols=284 Identities=14% Similarity=0.142 Sum_probs=166.5
Q ss_pred CCCceeEEEecC----CCCeEEEEecCCCCcc-------------chhhhhhhccccCCCcceEEEECCCCC-CCCCCCC
Q 012188 168 DCDCKFCTCWSS----SSRDTLFVKTQGPSAF-------------WTETLFPNFSSASKSTYRLFAIDLLGF-GRSPKPT 229 (468)
Q Consensus 168 d~~~~~~~~~~~----~~p~vl~lHG~g~s~~-------------~~~~~~~~L~~~~~~gy~Via~D~~G~-G~S~~~~ 229 (468)
++..++|..|+. ++|+|||+||++++.. ||..++..-..++.++|+|+++|++|+ |.|+.+.
T Consensus 31 ~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~ 110 (379)
T PRK00175 31 PPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPS 110 (379)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCC
Confidence 445678888864 2689999999998765 455554211111138999999999993 5554322
Q ss_pred C-------------CCCCHHHHHHHHHHHHhcccCCce-EEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCc
Q 012188 230 D-------------SLYTVREHLDMIEKSVIEPNKVKS-FHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGA 295 (468)
Q Consensus 230 ~-------------~~~t~~~~~~di~~~l~~~l~~~~-i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~ 295 (468)
. ..|+++++++++ ..+++++++++ ++++||||||.+++.+|.++|++|+++|++++.........
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 189 (379)
T PRK00175 111 SINPDTGKPYGSDFPVITIRDWVRAQ-ARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQNI 189 (379)
T ss_pred CCCCCCCCcccCCCCcCCHHHHHHHH-HHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHHH
Confidence 0 158999999999 69999999999 58999999999999999999999999999997654321110
Q ss_pred hhhHHHHHhhcCCCCCchhh---------hhhhhHHHHHHHh----hHHHHHhhcc---chh-----H-HHHHHHHhhhH
Q 012188 296 QASQYVMRKVAPRRVWPLIA---------FGASMACWYEHIS----RTICLLICKN---HRV-----W-EFLAKLVTRNR 353 (468)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~----~~~~~~~~~~---~~~-----~-~~~~~~~~~~~ 353 (468)
.........+.....|.... .+.....+..... ......+... ... . .........
T Consensus 190 ~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~-- 267 (379)
T PRK00175 190 AFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRY-- 267 (379)
T ss_pred HHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHH--
Confidence 00111111111111111000 0000011000000 0000000000 000 0 000000000
Q ss_pred HHHHhhhccccccchhHHhhHhHHHhccc--ccccchHHHhhccCCCcEEEEeeCCCCccChhhHHHHHHhCCCC----e
Q 012188 354 IRTFLLEGFFCHTHNAAWHTLHNIICGTA--NKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRA----R 427 (468)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~~----~ 427 (468)
....+........+........... ......+...+.+|++|+|+|+|++|.++|++.++++.+.+|++ +
T Consensus 268 ----~~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~ 343 (379)
T PRK00175 268 ----QGDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVS 343 (379)
T ss_pred ----HHHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeE
Confidence 0000000001111111111111100 00002245667899999999999999999999999999999987 7
Q ss_pred EEEec-CCCccccccCcHHHHHHHHHHHHhhcC
Q 012188 428 VKVIE-KKDHITIVVGRQKTFARELEEIWRSSS 459 (468)
Q Consensus 428 l~~i~-~~gH~~~~~e~p~~~~~~i~~fl~~~~ 459 (468)
+++++ ++||++++ ++|++|++.|.+||++..
T Consensus 344 l~~i~~~~GH~~~l-e~p~~~~~~L~~FL~~~~ 375 (379)
T PRK00175 344 YAEIDSPYGHDAFL-LDDPRYGRLVRAFLERAA 375 (379)
T ss_pred EEEeCCCCCchhHh-cCHHHHHHHHHHHHHhhh
Confidence 88785 89999998 999999999999998754
|
|
| >PLN02298 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.3e-26 Score=221.76 Aligned_cols=258 Identities=16% Similarity=0.199 Sum_probs=158.3
Q ss_pred CCCCceeEEEecC-----CCCeEEEEecCCCCccc-hhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHH
Q 012188 167 SDCDCKFCTCWSS-----SSRDTLFVKTQGPSAFW-TETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLD 240 (468)
Q Consensus 167 ~d~~~~~~~~~~~-----~~p~vl~lHG~g~s~~~-~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~ 240 (468)
.||..++++.|.+ .+++|||+||++.+..| +..+...|. ++||+|+++|+||||.|+++.....+++++++
T Consensus 40 ~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~---~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~ 116 (330)
T PLN02298 40 PRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLA---QMGFACFALDLEGHGRSEGLRAYVPNVDLVVE 116 (330)
T ss_pred CCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHH---hCCCEEEEecCCCCCCCCCccccCCCHHHHHH
Confidence 4778888888843 24569999999865444 333445554 47999999999999999865444468888888
Q ss_pred HHHHHHhcccCC------ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCc--hhhHHH---HHhhcCCC
Q 012188 241 MIEKSVIEPNKV------KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGA--QASQYV---MRKVAPRR 309 (468)
Q Consensus 241 di~~~l~~~l~~------~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~--~~~~~~---~~~~~~~~ 309 (468)
|+ ..+++.++. .+++|+||||||.+++.++.++|++|+++|+++|......... ...... .....+..
T Consensus 117 D~-~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (330)
T PLN02298 117 DC-LSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPIPQILTFVARFLPTL 195 (330)
T ss_pred HH-HHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchHHHHHHHHHHHHCCCC
Confidence 88 577765432 4799999999999999999999999999999998653321100 000000 01111100
Q ss_pred CCchhhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchH
Q 012188 310 VWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYL 389 (468)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (468)
..... .. . ....... .. ........ ...+. .. ........... .....
T Consensus 196 ~~~~~--~~----~-----------~~~~~~~-~~-~~~~~~~~-----~~~~~-~~--~~~~~~~~~~~-----~~~~~ 243 (330)
T PLN02298 196 AIVPT--AD----L-----------LEKSVKV-PA-KKIIAKRN-----PMRYN-GK--PRLGTVVELLR-----VTDYL 243 (330)
T ss_pred ccccC--CC----c-----------ccccccC-HH-HHHHHHhC-----ccccC-CC--ccHHHHHHHHH-----HHHHH
Confidence 00000 00 0 0000000 00 00000000 00000 00 00000001100 01122
Q ss_pred HHhhccCCCcEEEEeeCCCCccChhhHHHHHHhCC--CCeEEEecCCCccccccCcHH----HHHHHHHHHHhhcCCC
Q 012188 390 DAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIP--RARVKVIEKKDHITIVVGRQK----TFARELEEIWRSSSGH 461 (468)
Q Consensus 390 ~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p--~~~l~~i~~~gH~~~~~e~p~----~~~~~i~~fl~~~~~~ 461 (468)
...+.++++|+|+++|++|.++|++.++.+++.++ ++++++++++||.++. ++|+ .+.+.|.+||++....
T Consensus 244 ~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~-e~pd~~~~~~~~~i~~fl~~~~~~ 320 (330)
T PLN02298 244 GKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLF-GEPDENIEIVRRDILSWLNERCTG 320 (330)
T ss_pred HHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeec-CCCHHHHHHHHHHHHHHHHHhccC
Confidence 33457889999999999999999999999988874 7899999999999987 6664 5778899999886433
|
|
| >PRK10749 lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-25 Score=217.46 Aligned_cols=269 Identities=12% Similarity=0.126 Sum_probs=159.0
Q ss_pred CCCCceeEEEecC--CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCC-----CCCCHHHHH
Q 012188 167 SDCDCKFCTCWSS--SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD-----SLYTVREHL 239 (468)
Q Consensus 167 ~d~~~~~~~~~~~--~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~-----~~~t~~~~~ 239 (468)
.||..++|+.|++ ++++||++||++.+...+..+...+. +.||+|+++|+||||.|+.+.. ..+++++++
T Consensus 38 ~~g~~l~~~~~~~~~~~~~vll~HG~~~~~~~y~~~~~~l~---~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~ 114 (330)
T PRK10749 38 VDDIPIRFVRFRAPHHDRVVVICPGRIESYVKYAELAYDLF---HLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYV 114 (330)
T ss_pred CCCCEEEEEEccCCCCCcEEEEECCccchHHHHHHHHHHHH---HCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHH
Confidence 3666789999864 46789999999887755555665554 4899999999999999975432 235889999
Q ss_pred HHHHHHHhccc----CCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCc-hhhHHHHHhhcCCC-CCch
Q 012188 240 DMIEKSVIEPN----KVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGA-QASQYVMRKVAPRR-VWPL 313 (468)
Q Consensus 240 ~di~~~l~~~l----~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~-~~~~~~~~~~~~~~-~~~~ 313 (468)
+++ ..+++.+ +..+++++||||||.+++.++.++|+.++++|+++|......... .............. ....
T Consensus 115 ~d~-~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (330)
T PRK10749 115 DDL-AAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARRILNWAEGHPRIRDG 193 (330)
T ss_pred HHH-HHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHHHHHHHHHhcCCCCc
Confidence 999 5666654 667999999999999999999999999999999998643211111 11111111110000 0000
Q ss_pred hhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhh
Q 012188 314 IAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVR 393 (468)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (468)
.. .....|.. .. .............+...+ .+....... .....+......... ...+...+
T Consensus 194 ~~--~~~~~~~~-~~-~~~~~l~~~~~~~~~~~~--------~~~~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~ 255 (330)
T PRK10749 194 YA--IGTGRWRP-LP-FAINVLTHSRERYRRNLR--------FYADDPELR-VGGPTYHWVRESILA-----GEQVLAGA 255 (330)
T ss_pred CC--CCCCCCCC-CC-cCCCCCCCCHHHHHHHHH--------HHHhCCCcc-cCCCcHHHHHHHHHH-----HHHHHhhc
Confidence 00 00000000 00 000000000000000000 000000000 000000000000000 00112234
Q ss_pred ccCCCcEEEEeeCCCCccChhhHHHHHHhC-------CCCeEEEecCCCccccccCc---HHHHHHHHHHHHhhc
Q 012188 394 NHVKCDVNVFHGEDDELIPVECSYNVQRKI-------PRARVKVIEKKDHITIVVGR---QKTFARELEEIWRSS 458 (468)
Q Consensus 394 ~~i~~PvLii~G~~D~~vp~~~~~~l~~~~-------p~~~l~~i~~~gH~~~~~e~---p~~~~~~i~~fl~~~ 458 (468)
.++++|+|+|+|++|.+++++.++.+++.+ +++++++++|+||.++. |. .+.+.+.|.+||++.
T Consensus 256 ~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~-E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 256 GDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILF-EKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred cCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhh-CCcHHHHHHHHHHHHHHhhc
Confidence 678999999999999999999999888866 35689999999999997 55 467889999999763
|
|
| >TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.3e-25 Score=210.82 Aligned_cols=266 Identities=19% Similarity=0.176 Sum_probs=157.0
Q ss_pred CCceeEEEecC--CCCeEEEEecCCCC-ccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCC--CCCHHHHHHHHH
Q 012188 169 CDCKFCTCWSS--SSRDTLFVKTQGPS-AFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDS--LYTVREHLDMIE 243 (468)
Q Consensus 169 ~~~~~~~~~~~--~~p~vl~lHG~g~s-~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~--~~t~~~~~~di~ 243 (468)
+..+.|...++ .+++|||+||++++ ..|+..+...+. +.||+|+++|+||||.|+.+... .++++++++++
T Consensus 11 ~~~~~~~~~~~~~~~~~vl~~hG~~g~~~~~~~~~~~~l~---~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~- 86 (288)
T TIGR01250 11 GGYHLFTKTGGEGEKIKLLLLHGGPGMSHEYLENLRELLK---EEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDEL- 86 (288)
T ss_pred CCeEEEEeccCCCCCCeEEEEcCCCCccHHHHHHHHHHHH---hcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHH-
Confidence 33455555442 36899999997654 456655555555 23899999999999999866543 37899999999
Q ss_pred HHHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHH
Q 012188 244 KSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACW 323 (468)
Q Consensus 244 ~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (468)
..++++++.++++++||||||.+++.+|.++|++++++|++++...... . ........ ..++...
T Consensus 87 ~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~-~---~~~~~~~~---~~~~~~~-------- 151 (288)
T TIGR01250 87 EEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPE-Y---VKELNRLR---KELPPEV-------- 151 (288)
T ss_pred HHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchH-H---HHHHHHHH---hhcChhH--------
Confidence 6899999999999999999999999999999999999999987542210 0 00000000 0000000
Q ss_pred HHHHhhHHHHHhhccchhHHHHHHHHh-----hhHHHHHhhhccccccchhHHhhHhHH--HhcccccccchHHHhhccC
Q 012188 324 YEHISRTICLLICKNHRVWEFLAKLVT-----RNRIRTFLLEGFFCHTHNAAWHTLHNI--ICGTANKLDGYLDAVRNHV 396 (468)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i 396 (468)
...+....................... .......... .........+..+... +..............+.++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 230 (288)
T TIGR01250 152 RAAIKRCEASGDYDNPEYQEAVEVFYHHLLCRTRKWPEALKH-LKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEI 230 (288)
T ss_pred HHHHHHHHhccCcchHHHHHHHHHHHHHhhcccccchHHHHH-HhhccCHHHHhcccCCccccccccccccCHHHHhhcc
Confidence 000000000000000000000000000 0000000000 0000000000000000 0000000111233445788
Q ss_pred CCcEEEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHh
Q 012188 397 KCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWR 456 (468)
Q Consensus 397 ~~PvLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~ 456 (468)
++|+++++|++|.+ +++..+.+.+.+|++++++++++||+++. ++|+++++.|.+||+
T Consensus 231 ~~P~lii~G~~D~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 231 KVPTLLTVGEFDTM-TPEAAREMQELIAGSRLVVFPDGSHMTMI-EDPEVYFKLLSDFIR 288 (288)
T ss_pred CCCEEEEecCCCcc-CHHHHHHHHHhccCCeEEEeCCCCCCccc-CCHHHHHHHHHHHhC
Confidence 99999999999985 66788889999999999999999999998 899999999999984
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase |
| >TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-25 Score=207.58 Aligned_cols=249 Identities=18% Similarity=0.197 Sum_probs=154.3
Q ss_pred CCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCC-CCCCHHHHHHH-HHHHHhcccCCceEEEE
Q 012188 181 SRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD-SLYTVREHLDM-IEKSVIEPNKVKSFHIV 258 (468)
Q Consensus 181 ~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~-~~~t~~~~~~d-i~~~l~~~l~~~~i~lv 258 (468)
+|+|||+||++++...+..+.+.|+ ++|+|+++|+||||.|+.+.. ..+++++++++ + ..+++.++.++++++
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~----~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~ 75 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLG----PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDIL-ATLLDQLGIEPFFLV 75 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhc----ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHH-HHHHHHcCCCeEEEE
Confidence 4789999999988777777888887 899999999999999987654 56789999999 6 688888888999999
Q ss_pred EEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHHhhcc
Q 012188 259 AHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKN 338 (468)
Q Consensus 259 GhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (468)
||||||.+++.+|.++|+.|++++++++......... ..... .....+...........+........ .+...
T Consensus 76 G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 148 (251)
T TIGR03695 76 GYSMGGRIALYYALQYPERVQGLILESGSPGLATEEE----RAARR-QNDEQLAQRFEQEGLEAFLDDWYQQP--LFASQ 148 (251)
T ss_pred EeccHHHHHHHHHHhCchheeeeEEecCCCCcCchHh----hhhhh-hcchhhhhHHHhcCccHHHHHHhcCc--eeeec
Confidence 9999999999999999999999999987543211110 00000 00000000000000000000000000 00000
Q ss_pred chhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChhhHHH
Q 012188 339 HRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYN 418 (468)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~ 418 (468)
....... ...+........... +...+..............+.++++|+++++|++|..++ +..+.
T Consensus 149 ~~~~~~~---------~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~ 214 (251)
T TIGR03695 149 KNLPPEQ---------RQALRAKRLANNPEG----LAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKE 214 (251)
T ss_pred ccCChHH---------hHHHHHhcccccchH----HHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHH
Confidence 0000000 000000000000000 000111100011112233346789999999999998774 56777
Q ss_pred HHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHh
Q 012188 419 VQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWR 456 (468)
Q Consensus 419 l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~ 456 (468)
+.+..+++++++++++||++++ ++|+++++.|.+|++
T Consensus 215 ~~~~~~~~~~~~~~~~gH~~~~-e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 215 MQKLLPNLTLVIIANAGHNIHL-ENPEAFAKILLAFLE 251 (251)
T ss_pred HHhcCCCCcEEEEcCCCCCcCc-cChHHHHHHHHHHhC
Confidence 8888899999999999999997 999999999999983
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. |
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-25 Score=210.71 Aligned_cols=251 Identities=14% Similarity=0.103 Sum_probs=153.2
Q ss_pred cCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccC-CceEE
Q 012188 178 SSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNK-VKSFH 256 (468)
Q Consensus 178 ~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~-~~~i~ 256 (468)
++++|+|||+||++.+...|..+.+.|. ++||+|+++|+||||.|.......++++++++++ ..++++++ .++++
T Consensus 15 ~~~~p~vvliHG~~~~~~~w~~~~~~L~---~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l-~~~i~~l~~~~~v~ 90 (273)
T PLN02211 15 NRQPPHFVLIHGISGGSWCWYKIRCLME---NSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPL-IDFLSSLPENEKVI 90 (273)
T ss_pred cCCCCeEEEECCCCCCcCcHHHHHHHHH---hCCCEEEEecccCCCCCCCCcccCCCHHHHHHHH-HHHHHhcCCCCCEE
Confidence 4567899999998877665666788776 3699999999999999865444457999999999 68888874 57999
Q ss_pred EEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHHhh
Q 012188 257 IVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLIC 336 (468)
Q Consensus 257 lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (468)
++||||||.+++.++.++|++|+++|++++.... .+............. +. ........... .... ...
T Consensus 91 lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~--~g~~~~~~~~~~~~~---~~--~~~~~~~~~~~-~~~~---~~~ 159 (273)
T PLN02211 91 LVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLK--LGFQTDEDMKDGVPD---LS--EFGDVYELGFG-LGPD---QPP 159 (273)
T ss_pred EEEECchHHHHHHHHHhChhheeEEEEeccccCC--CCCCHHHHHhccccc---hh--hhccceeeeec-cCCC---CCC
Confidence 9999999999999999999999999999864321 110001100000000 00 00000000000 0000 000
Q ss_pred ccchhH-HHHHHHHh---hhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccC-CCcEEEEeeCCCCcc
Q 012188 337 KNHRVW-EFLAKLVT---RNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHV-KCDVNVFHGEDDELI 411 (468)
Q Consensus 337 ~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~PvLii~G~~D~~v 411 (468)
...... +.....+. ..............+. . .............++ ++|+++|.|++|..+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~----------~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~i 225 (273)
T PLN02211 160 TSAIIKKEFRRKILYQMSPQEDSTLAAMLLRPGP----I----------LALRSARFEEETGDIDKVPRVYIKTLHDHVV 225 (273)
T ss_pred ceeeeCHHHHHHHHhcCCCHHHHHHHHHhcCCcC----c----------cccccccccccccccCccceEEEEeCCCCCC
Confidence 000000 00000000 0000000000000000 0 000000111112234 789999999999999
Q ss_pred ChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhcC
Q 012188 412 PVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSSS 459 (468)
Q Consensus 412 p~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~ 459 (468)
|++.++.+.+.+|+++++.++ +||.+++ ++|+++++.|.++.....
T Consensus 226 p~~~~~~m~~~~~~~~~~~l~-~gH~p~l-s~P~~~~~~i~~~a~~~~ 271 (273)
T PLN02211 226 KPEQQEAMIKRWPPSQVYELE-SDHSPFF-STPFLLFGLLIKAAASVG 271 (273)
T ss_pred CHHHHHHHHHhCCccEEEEEC-CCCCccc-cCHHHHHHHHHHHHHHhc
Confidence 999999999999999999997 8999998 999999999999876543
|
|
| >PLN02894 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.93 E-value=2e-24 Score=214.79 Aligned_cols=269 Identities=16% Similarity=0.246 Sum_probs=152.1
Q ss_pred ceeEEEec--CCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCH----HHHHHHHHH
Q 012188 171 CKFCTCWS--SSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTV----REHLDMIEK 244 (468)
Q Consensus 171 ~~~~~~~~--~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~----~~~~~di~~ 244 (468)
.+....|. +++|+|||+||++.+...+...++.|. ++|+|+++|+||||.|+.+.....+. +.+++++ .
T Consensus 93 ~~~~~~~~~~~~~p~vvllHG~~~~~~~~~~~~~~L~----~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i-~ 167 (402)
T PLN02894 93 FINTVTFDSKEDAPTLVMVHGYGASQGFFFRNFDALA----SRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSF-E 167 (402)
T ss_pred eEEEEEecCCCCCCEEEEECCCCcchhHHHHHHHHHH----hCCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHH-H
Confidence 45555553 356899999999876654444667776 68999999999999997654321222 2355666 4
Q ss_pred HHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCc------------
Q 012188 245 SVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWP------------ 312 (468)
Q Consensus 245 ~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 312 (468)
.+++.++.++++++||||||++++.+|.++|++|+++|+++|.......... ..+..... ..|.
T Consensus 168 ~~~~~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~ 243 (402)
T PLN02894 168 EWRKAKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDK-SEWLTKFR---ATWKGAVLNHLWESNF 243 (402)
T ss_pred HHHHHcCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchh-HHHHhhcc---hhHHHHHHHHHhhcCC
Confidence 7777888899999999999999999999999999999999987654322110 00010000 0000
Q ss_pred -hhhhhhhhHHHHHHHhhHHH-HHhhccchhHHHHHHHHh---hhHHHHHhhhccccccchhHHhhHhHHHhcccccccc
Q 012188 313 -LIAFGASMACWYEHISRTIC-LLICKNHRVWEFLAKLVT---RNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDG 387 (468)
Q Consensus 313 -~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (468)
+.........+...+..... ..+..... ...+. .....+++........... ..+ ..+.........
T Consensus 244 ~p~~~~~~~gp~~~~l~~~~~~~~~~~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~ 315 (402)
T PLN02894 244 TPQKIIRGLGPWGPNLVRRYTTARFGAHST-----GDILSEEESKLLTDYVYHTLAAKASGE--LCL-KYIFSFGAFARK 315 (402)
T ss_pred CHHHHHHhccchhHHHHHHHHHHHhhhccc-----ccccCcchhhHHHHHHHHhhcCCCchH--HHH-HHhccCchhhcc
Confidence 00000000000000000000 00000000 00000 0000011111000000000 000 011111111122
Q ss_pred hHHHhhccCCCcEEEEeeCCCCccChhhHHHHHHhC-CCCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 388 YLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKI-PRARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 388 ~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~-p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
.....+.++++|+++|+|++|.+.+ .....+.+.. +.+++++++++||+++. |+|++|++.|.+|++.-
T Consensus 316 ~~~~~l~~I~vP~liI~G~~D~i~~-~~~~~~~~~~~~~~~~~~i~~aGH~~~~-E~P~~f~~~l~~~~~~~ 385 (402)
T PLN02894 316 PLLESASEWKVPTTFIYGRHDWMNY-EGAVEARKRMKVPCEIIRVPQGGHFVFL-DNPSGFHSAVLYACRKY 385 (402)
T ss_pred hHhhhcccCCCCEEEEEeCCCCCCc-HHHHHHHHHcCCCCcEEEeCCCCCeeec-cCHHHHHHHHHHHHHHh
Confidence 2334457889999999999998765 5555565555 46899999999999997 99999999999888764
|
|
| >TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Probab=99.93 E-value=2e-24 Score=208.17 Aligned_cols=117 Identities=23% Similarity=0.231 Sum_probs=95.3
Q ss_pred CCCceeEEEecC-CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCC-CCCCHHHHHHHHHHH
Q 012188 168 DCDCKFCTCWSS-SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD-SLYTVREHLDMIEKS 245 (468)
Q Consensus 168 d~~~~~~~~~~~-~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~-~~~t~~~~~~di~~~ 245 (468)
|+..++|..+++ ++++|||+||++++..+.. +...+. ..+|+|+++|+||||.|+.+.. ..++.+++++++ ..
T Consensus 13 ~~~~l~y~~~g~~~~~~lvllHG~~~~~~~~~-~~~~~~---~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl-~~ 87 (306)
T TIGR01249 13 DNHQLYYEQSGNPDGKPVVFLHGGPGSGTDPG-CRRFFD---PETYRIVLFDQRGCGKSTPHACLEENTTWDLVADI-EK 87 (306)
T ss_pred CCcEEEEEECcCCCCCEEEEECCCCCCCCCHH-HHhccC---ccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHH-HH
Confidence 566688877764 4678999999887655432 333332 3689999999999999986543 346888999999 68
Q ss_pred HhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCC
Q 012188 246 VIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYY 289 (468)
Q Consensus 246 l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~ 289 (468)
++++++.++++++||||||.+++.++.++|++++++|++++...
T Consensus 88 l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~ 131 (306)
T TIGR01249 88 LREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLL 131 (306)
T ss_pred HHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccC
Confidence 99999999999999999999999999999999999999987543
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. |
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.3e-24 Score=211.19 Aligned_cols=252 Identities=19% Similarity=0.216 Sum_probs=160.2
Q ss_pred CCCceeEEEecC-CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 012188 168 DCDCKFCTCWSS-SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSV 246 (468)
Q Consensus 168 d~~~~~~~~~~~-~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l 246 (468)
++..++|..+++ ++|+|||+||++++...|..+.+.|. ++|+|+++|+||||.|.... ..++++++++++ ..+
T Consensus 117 ~~~~i~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~l~----~~~~v~~~d~~g~G~s~~~~-~~~~~~~~~~~~-~~~ 190 (371)
T PRK14875 117 GGRTVRYLRLGEGDGTPVVLIHGFGGDLNNWLFNHAALA----AGRPVIALDLPGHGASSKAV-GAGSLDELAAAV-LAF 190 (371)
T ss_pred cCcEEEEecccCCCCCeEEEECCCCCccchHHHHHHHHh----cCCEEEEEcCCCCCCCCCCC-CCCCHHHHHHHH-HHH
Confidence 345567777764 57899999999987776666778777 67999999999999996543 247899999999 689
Q ss_pred hcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHH
Q 012188 247 IEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEH 326 (468)
Q Consensus 247 ~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (468)
++.++.++++++||||||.+++.+|.++|++++++|+++++....... ..+......... ...+..+...
T Consensus 191 ~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~---~~~~~~~~~~~~-------~~~~~~~~~~ 260 (371)
T PRK14875 191 LDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEIN---GDYIDGFVAAES-------RRELKPVLEL 260 (371)
T ss_pred HHhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccc---hhHHHHhhcccc-------hhHHHHHHHH
Confidence 999998999999999999999999999999999999998764332111 111110000000 0001111110
Q ss_pred HhhHHHHHhhccchhH-HHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEee
Q 012188 327 ISRTICLLICKNHRVW-EFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHG 405 (468)
Q Consensus 327 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G 405 (468)
. +....... ........... ..........+....... ..........+.++++|+++++|
T Consensus 261 ~-------~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~i~~Pvlii~g 322 (371)
T PRK14875 261 L-------FADPALVTRQMVEDLLKYKR----------LDGVDDALRALADALFAG-GRQRVDLRDRLASLAIPVLVIWG 322 (371)
T ss_pred H-------hcChhhCCHHHHHHHHHHhc----------cccHHHHHHHHHHHhccC-cccchhHHHHHhcCCCCEEEEEE
Confidence 0 00000000 00000000000 000000000000000000 00011233345678999999999
Q ss_pred CCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 406 EDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 406 ~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
++|.++|++.++.+ .+++++.+++++||++++ ++|+++++.|.+||++
T Consensus 323 ~~D~~vp~~~~~~l---~~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 323 EQDRIIPAAHAQGL---PDGVAVHVLPGAGHMPQM-EAAADVNRLLAEFLGK 370 (371)
T ss_pred CCCCccCHHHHhhc---cCCCeEEEeCCCCCChhh-hCHHHHHHHHHHHhcc
Confidence 99999998776544 346899999999999998 9999999999999965
|
|
| >PLN02652 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.5e-24 Score=209.50 Aligned_cols=256 Identities=14% Similarity=0.196 Sum_probs=158.4
Q ss_pred CCCCceeEEEecC----CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHH
Q 012188 167 SDCDCKFCTCWSS----SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMI 242 (468)
Q Consensus 167 ~d~~~~~~~~~~~----~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di 242 (468)
.++..+.+..|.+ .+++|||+||++++...+..+.+.|. ++||+|+++|+||||.|++......+.+++++|+
T Consensus 118 ~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~---~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl 194 (395)
T PLN02652 118 ARRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAKQLT---SCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDT 194 (395)
T ss_pred CCCCEEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHHHHH---HCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHH
Confidence 3556677888844 24689999999887765666777776 4799999999999999987654445788888888
Q ss_pred HHHHhcccC----CceEEEEEEcccHHHHHHHHHhCCC---ccceEEEecCCCCCCCCCch--hhHHHHHhhcCCCCCch
Q 012188 243 EKSVIEPNK----VKSFHIVAHSLGCILALALAVKHPG---SVKSLTLLAPPYYPVPKGAQ--ASQYVMRKVAPRRVWPL 313 (468)
Q Consensus 243 ~~~l~~~l~----~~~i~lvGhS~Gg~ial~~a~~~p~---~v~~lVl~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 313 (468)
..+++.+. ..+++++||||||.+++.++. +|+ +++++|+.+|.....+.... ....+.....+......
T Consensus 195 -~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~~~~~~l~~~~~p~~~~~~ 272 (395)
T PLN02652 195 -EAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIVGAVAPIFSLVAPRFQFKG 272 (395)
T ss_pred -HHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHHHHHHHHHHHhCCCCcccC
Confidence 46666543 347999999999999998764 564 89999999886533211100 00000111111000000
Q ss_pred hhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhh
Q 012188 314 IAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVR 393 (468)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (468)
.. .. . .. .... ... ......+.+...... .......... ...++...+
T Consensus 273 ~~--~~-~---~~--------~s~~---~~~---------~~~~~~dp~~~~g~i-~~~~~~~~~~-----~~~~l~~~L 320 (395)
T PLN02652 273 AN--KR-G---IP--------VSRD---PAA---------LLAKYSDPLVYTGPI-RVRTGHEILR-----ISSYLTRNF 320 (395)
T ss_pred cc--cc-c---CC--------cCCC---HHH---------HHHHhcCCCcccCCc-hHHHHHHHHH-----HHHHHHhhc
Confidence 00 00 0 00 0000 000 000000000000000 0000000000 011223345
Q ss_pred ccCCCcEEEEeeCCCCccChhhHHHHHHhCC--CCeEEEecCCCccccccCcHHHHHHHHHHHHhhcC
Q 012188 394 NHVKCDVNVFHGEDDELIPVECSYNVQRKIP--RARVKVIEKKDHITIVVGRQKTFARELEEIWRSSS 459 (468)
Q Consensus 394 ~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p--~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~ 459 (468)
.++++|+|++||++|.++|++.++++++.++ +.+++++++++|.++.++.++++.+.+.+||+...
T Consensus 321 ~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~ 388 (395)
T PLN02652 321 KSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRL 388 (395)
T ss_pred ccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHh
Confidence 7889999999999999999999999998875 47899999999999875589999999999998753
|
|
| >COG2267 PldB Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.4e-23 Score=199.39 Aligned_cols=263 Identities=16% Similarity=0.210 Sum_probs=166.6
Q ss_pred CCCCceeEEEecCC---CCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCC-CCCCCCCCHHHHHHHH
Q 012188 167 SDCDCKFCTCWSSS---SRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSP-KPTDSLYTVREHLDMI 242 (468)
Q Consensus 167 ~d~~~~~~~~~~~~---~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~-~~~~~~~t~~~~~~di 242 (468)
.|+..+.++.|... ..+||++||.+.+..-+..++..|. ++||.|+++|+||||.|. +..+...++.++.+|+
T Consensus 17 ~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~---~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl 93 (298)
T COG2267 17 ADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADDLA---ARGFDVYALDLRGHGRSPRGQRGHVDSFADYVDDL 93 (298)
T ss_pred CCCceEEEEeecCCCCCCcEEEEecCchHHHHHHHHHHHHHH---hCCCEEEEecCCCCCCCCCCCcCCchhHHHHHHHH
Confidence 47788999999433 2589999999987765555777766 699999999999999998 5555556688999998
Q ss_pred HHHHhcccC----CceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhh
Q 012188 243 EKSVIEPNK----VKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGA 318 (468)
Q Consensus 243 ~~~l~~~l~----~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (468)
..+++... ..+++++||||||.+++.++.+++..++++|+.+|......................+..+.+.+..
T Consensus 94 -~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 172 (298)
T COG2267 94 -DAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLALKLLGRIRPKLPVDS 172 (298)
T ss_pred -HHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHhcccccccccccccCc
Confidence 56666543 4699999999999999999999999999999999887653200000000001111111122222111
Q ss_pred hhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhh--HHHHHhhhcc-ccccchhHHhhHhHHHhcccccccchHHHhhcc
Q 012188 319 SMACWYEHISRTICLLICKNHRVWEFLAKLVTRN--RIRTFLLEGF-FCHTHNAAWHTLHNIICGTANKLDGYLDAVRNH 395 (468)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (468)
. . .. .......+++ ....+..+.. ........| +........ .. .......
T Consensus 173 -~-~----~~--------------~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w--~~~~~~a~~---~~-~~~~~~~ 226 (298)
T COG2267 173 -N-L----LE--------------GVLTDDLSRDPAEVAAYEADPLIGVGGPVSRW--VDLALLAGR---VP-ALRDAPA 226 (298)
T ss_pred -c-c----cc--------------CcCcchhhcCHHHHHHHhcCCccccCCccHHH--HHHHHHhhc---cc-chhcccc
Confidence 0 0 00 0000001111 0011111110 111111111 111111111 00 1111256
Q ss_pred CCCcEEEEeeCCCCccC-hhhHHHHHHhC--CCCeEEEecCCCccccccCcH--HHHHHHHHHHHhhcC
Q 012188 396 VKCDVNVFHGEDDELIP-VECSYNVQRKI--PRARVKVIEKKDHITIVVGRQ--KTFARELEEIWRSSS 459 (468)
Q Consensus 396 i~~PvLii~G~~D~~vp-~~~~~~l~~~~--p~~~l~~i~~~gH~~~~~e~p--~~~~~~i~~fl~~~~ 459 (468)
+++|+|+++|++|.+++ .+.+.++.+.. |+.++++++|+.|.++.+... +++.+.+.+|+.+..
T Consensus 227 ~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~ 295 (298)
T COG2267 227 IALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEAL 295 (298)
T ss_pred ccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhc
Confidence 79999999999999999 67777777765 678999999999999986667 899999999998754
|
|
| >KOG1455 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-23 Score=189.70 Aligned_cols=262 Identities=17% Similarity=0.209 Sum_probs=173.3
Q ss_pred CCCcCCCCceeEEEecC-----CCCeEEEEecCCCCccch-hhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHH
Q 012188 163 IPRWSDCDCKFCTCWSS-----SSRDTLFVKTQGPSAFWT-ETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVR 236 (468)
Q Consensus 163 ~~r~~d~~~~~~~~~~~-----~~p~vl~lHG~g~s~~~~-~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~ 236 (468)
.....+|..+.+..|.+ .+..|+++||++....|. ..+...|+ +.||.|+++|++|||.|++......+++
T Consensus 31 ~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~---~~g~~v~a~D~~GhG~SdGl~~yi~~~d 107 (313)
T KOG1455|consen 31 FFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLA---KSGFAVYAIDYEGHGRSDGLHAYVPSFD 107 (313)
T ss_pred eEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHH---hCCCeEEEeeccCCCcCCCCcccCCcHH
Confidence 45556788899999944 234789999999866443 33666666 6999999999999999998776666888
Q ss_pred HHHHHHHHHHhc------ccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchh--hHHHHHhhcC-
Q 012188 237 EHLDMIEKSVIE------PNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQA--SQYVMRKVAP- 307 (468)
Q Consensus 237 ~~~~di~~~l~~------~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~--~~~~~~~~~~- 307 (468)
..++|+. ...+ .....+.+++||||||.+++.++.++|+..+++|+++|.....+..... ...++..+..
T Consensus 108 ~~v~D~~-~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l~~l 186 (313)
T KOG1455|consen 108 LVVDDVI-SFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISILTLLSKL 186 (313)
T ss_pred HHHHHHH-HHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHHHHHHHHh
Confidence 8888884 4333 2334589999999999999999999999999999999876543332111 1111111110
Q ss_pred CCCCchhhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccc
Q 012188 308 RRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDG 387 (468)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (468)
...|...... +.....+.....+.....+-.+........+...++.. ..
T Consensus 187 iP~wk~vp~~-------------------------d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~-----~~ 236 (313)
T KOG1455|consen 187 IPTWKIVPTK-------------------------DIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRV-----TA 236 (313)
T ss_pred CCceeecCCc-------------------------cccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHH-----HH
Confidence 0011100000 00111111222222222222222222222222222211 24
Q ss_pred hHHHhhccCCCcEEEEeeCCCCccChhhHHHHHHhCC--CCeEEEecCCCccccc---cCcHHHHHHHHHHHHhhc
Q 012188 388 YLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIP--RARVKVIEKKDHITIV---VGRQKTFARELEEIWRSS 458 (468)
Q Consensus 388 ~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p--~~~l~~i~~~gH~~~~---~e~p~~~~~~i~~fl~~~ 458 (468)
++...+.++++|.+++||+.|.++.++.++++++..+ +.++.++||.-|.++. +|+-+.+...|.+||++.
T Consensus 237 ~le~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 237 DLEKNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred HHHHhcccccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 4566678999999999999999999999999999885 5699999999999884 466678888999999763
|
|
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.7e-23 Score=236.58 Aligned_cols=261 Identities=13% Similarity=0.125 Sum_probs=159.5
Q ss_pred eEEEecC--CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCC-------CCCCCHHHHHHHHH
Q 012188 173 FCTCWSS--SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPT-------DSLYTVREHLDMIE 243 (468)
Q Consensus 173 ~~~~~~~--~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~-------~~~~t~~~~~~di~ 243 (468)
+|+.++. ++++|||+||++++...|..+++.|. ++|+|+++|+||||.|+.+. ...++++++++++
T Consensus 1361 ~~~~~G~~~~~~~vVllHG~~~s~~~w~~~~~~L~----~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l- 1435 (1655)
T PLN02980 1361 KVHEVGQNAEGSVVLFLHGFLGTGEDWIPIMKAIS----GSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLL- 1435 (1655)
T ss_pred EEEecCCCCCCCeEEEECCCCCCHHHHHHHHHHHh----CCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHH-
Confidence 3344443 46899999999887765666788877 78999999999999997543 1357899999999
Q ss_pred HHHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHH
Q 012188 244 KSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACW 323 (468)
Q Consensus 244 ~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (468)
..++++++.++++++||||||.+++.++.++|++|+++|++++........ .... ..... ... ...+..
T Consensus 1436 ~~ll~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~---~~~~-~~~~~-~~~-----~~~l~~- 1504 (1655)
T PLN02980 1436 YKLIEHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEV---ARKI-RSAKD-DSR-----ARMLID- 1504 (1655)
T ss_pred HHHHHHhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchH---HHHH-Hhhhh-hHH-----HHHHHh-
Confidence 688999999999999999999999999999999999999998643211110 0000 00000 000 000000
Q ss_pred HHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEE
Q 012188 324 YEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVF 403 (468)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii 403 (468)
..........+. ...+... .............+.... .. .....+..............+.++++|+|+|
T Consensus 1505 -~g~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~-~~---~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI 1574 (1655)
T PLN02980 1505 -HGLEIFLENWYS--GELWKSL---RNHPHFNKIVASRLLHKD-VP---SLAKLLSDLSIGRQPSLWEDLKQCDTPLLLV 1574 (1655)
T ss_pred -hhHHHHHHHhcc--HHHhhhh---ccCHHHHHHHHHHHhcCC-HH---HHHHHHHHhhhcccchHHHHHhhCCCCEEEE
Confidence 000000000000 0000000 000000000000000000 00 0001111100001122334468899999999
Q ss_pred eeCCCCccChhhHHHHHHhCCC------------CeEEEecCCCccccccCcHHHHHHHHHHHHhhcCCC
Q 012188 404 HGEDDELIPVECSYNVQRKIPR------------ARVKVIEKKDHITIVVGRQKTFARELEEIWRSSSGH 461 (468)
Q Consensus 404 ~G~~D~~vp~~~~~~l~~~~p~------------~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~~~ 461 (468)
+|++|..++ +.++++.+.+|+ +++++++++||++++ |+|++|++.|.+||++....
T Consensus 1575 ~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~l-E~Pe~f~~~I~~FL~~~~~~ 1642 (1655)
T PLN02980 1575 VGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHL-ENPLPVIRALRKFLTRLHNS 1642 (1655)
T ss_pred EECCCCccH-HHHHHHHHHccccccccccccccceEEEEECCCCCchHH-HCHHHHHHHHHHHHHhcccc
Confidence 999999875 667778877775 489999999999998 99999999999999886543
|
|
| >PRK06765 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.6e-22 Score=197.26 Aligned_cols=285 Identities=14% Similarity=0.088 Sum_probs=169.5
Q ss_pred CceeEEEecC----CCCeEEEEecCCCC-------------ccchhhhhhhccccCCCcceEEEECCCCCCCCCCC----
Q 012188 170 DCKFCTCWSS----SSRDTLFVKTQGPS-------------AFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKP---- 228 (468)
Q Consensus 170 ~~~~~~~~~~----~~p~vl~lHG~g~s-------------~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~---- 228 (468)
-.+.|..|+. ..+.||++|+++++ ..||..++-.=..+-.+.|.||++|..|-|.|..|
T Consensus 41 ~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~ 120 (389)
T PRK06765 41 VQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVIT 120 (389)
T ss_pred ceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCC
Confidence 4578888854 24789999998773 24666555431112236899999999997753211
Q ss_pred --------C--------CCCCCHHHHHHHHHHHHhcccCCceEE-EEEEcccHHHHHHHHHhCCCccceEEEecCCCCCC
Q 012188 229 --------T--------DSLYTVREHLDMIEKSVIEPNKVKSFH-IVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPV 291 (468)
Q Consensus 229 --------~--------~~~~t~~~~~~di~~~l~~~l~~~~i~-lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~ 291 (468)
. -..++++++++++ ..++++++++++. ++||||||++++.+|.+||++|+++|++++.....
T Consensus 121 tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~-~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~~~ 199 (389)
T PRK06765 121 TGPASINPKTGKPYGMDFPVVTILDFVRVQ-KELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQND 199 (389)
T ss_pred CCCCCCCcCCCCccCCCCCcCcHHHHHHHH-HHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCCCC
Confidence 1 1247999999999 6899999999986 99999999999999999999999999998765443
Q ss_pred CCC-chhhHHHHHhhcCCCCCchhhh--------h-----hhhHHHHHHHhhHHHHHhhccch-hHH---HHHHHHhhhH
Q 012188 292 PKG-AQASQYVMRKVAPRRVWPLIAF--------G-----ASMACWYEHISRTICLLICKNHR-VWE---FLAKLVTRNR 353 (468)
Q Consensus 292 ~~~-~~~~~~~~~~~~~~~~~~~~~~--------~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~ 353 (468)
+.. ....+.....+.....|..... + .....++.. .+.+...+.+... ... ........+.
T Consensus 200 ~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s-~~~~~~~f~r~~~~~~~~~~~~~~~~~~e~ 278 (389)
T PRK06765 200 AWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFD-EHFYETTFPRNASIEVDPYEKVSTLTSFEK 278 (389)
T ss_pred hhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCC-HHHHHHHcCcCccccccccccccchhhHHH
Confidence 222 1111212222222222211111 0 000011000 0000000000000 000 0000000001
Q ss_pred HHHHhhhccccccchhHHhhHhHHHhcccc-cccchHHHhhccCCCcEEEEeeCCCCccChhhHHHHHHhCC----CCeE
Q 012188 354 IRTFLLEGFFCHTHNAAWHTLHNIICGTAN-KLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIP----RARV 428 (468)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p----~~~l 428 (468)
+.....+.+........+..+...+..... .....+...+.++++|+|+|+|++|.++|++.++++.+.+| ++++
T Consensus 279 yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l 358 (389)
T PRK06765 279 EINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEV 358 (389)
T ss_pred HHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEE
Confidence 111111111222222222222222221111 11123556678899999999999999999999999999886 6899
Q ss_pred EEecC-CCccccccCcHHHHHHHHHHHHhh
Q 012188 429 KVIEK-KDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 429 ~~i~~-~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
+++++ +||+.++ ++|+++++.|.+||++
T Consensus 359 ~~I~s~~GH~~~l-e~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 359 YEIESINGHMAGV-FDIHLFEKKIYEFLNR 387 (389)
T ss_pred EEECCCCCcchhh-cCHHHHHHHHHHHHcc
Confidence 99985 9999998 9999999999999975
|
|
| >KOG2984 consensus Predicted hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-23 Score=176.29 Aligned_cols=242 Identities=18% Similarity=0.220 Sum_probs=163.8
Q ss_pred CCCceeEEEecCCCCeEEEEecCCCCc--cchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHH---HHHHHH
Q 012188 168 DCDCKFCTCWSSSSRDTLFVKTQGPSA--FWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVR---EHLDMI 242 (468)
Q Consensus 168 d~~~~~~~~~~~~~p~vl~lHG~g~s~--~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~---~~~~di 242 (468)
.|..+.|...+.+...||++.|.-++. .|..++..... . ..++|+++|.||+|.|..|.. ...++ ..+++.
T Consensus 29 ng~ql~y~~~G~G~~~iLlipGalGs~~tDf~pql~~l~k-~--l~~TivawDPpGYG~SrPP~R-kf~~~ff~~Da~~a 104 (277)
T KOG2984|consen 29 NGTQLGYCKYGHGPNYILLIPGALGSYKTDFPPQLLSLFK-P--LQVTIVAWDPPGYGTSRPPER-KFEVQFFMKDAEYA 104 (277)
T ss_pred cCceeeeeecCCCCceeEecccccccccccCCHHHHhcCC-C--CceEEEEECCCCCCCCCCCcc-cchHHHHHHhHHHH
Confidence 445577777777777899999954432 34443333222 2 239999999999999976654 33333 344444
Q ss_pred HHHHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHH
Q 012188 243 EKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMAC 322 (468)
Q Consensus 243 ~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (468)
..+++.+..+++.++|+|=||..|+..|+++++.|.++|+.++.......+......+. ....
T Consensus 105 -vdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiR----------------dv~k 167 (277)
T KOG2984|consen 105 -VDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIR----------------DVNK 167 (277)
T ss_pred -HHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchH----------------HHhh
Confidence 47889999999999999999999999999999999999999877655333322211111 1111
Q ss_pred HHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhccccccc-chHHHhhccCCCcEE
Q 012188 323 WYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLD-GYLDAVRNHVKCDVN 401 (468)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~PvL 401 (468)
|.....+.+ ...+..+ .....|..+-+.........+ ...+..+.+++||++
T Consensus 168 Ws~r~R~P~--------------e~~Yg~e-------------~f~~~wa~wvD~v~qf~~~~dG~fCr~~lp~vkcPtl 220 (277)
T KOG2984|consen 168 WSARGRQPY--------------EDHYGPE-------------TFRTQWAAWVDVVDQFHSFCDGRFCRLVLPQVKCPTL 220 (277)
T ss_pred hhhhhcchH--------------HHhcCHH-------------HHHHHHHHHHHHHHHHhhcCCCchHhhhcccccCCee
Confidence 111111100 0000111 111222222222222222222 335566789999999
Q ss_pred EEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 402 VFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 402 ii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
|+||+.|++++...+-.+....+.++++++|.++|..++ ..+++|+..+.+||++.
T Consensus 221 i~hG~kDp~~~~~hv~fi~~~~~~a~~~~~peGkHn~hL-rya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 221 IMHGGKDPFCGDPHVCFIPVLKSLAKVEIHPEGKHNFHL-RYAKEFNKLVLDFLKST 276 (277)
T ss_pred EeeCCcCCCCCCCCccchhhhcccceEEEccCCCcceee-echHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999998 99999999999999864
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-22 Score=213.10 Aligned_cols=267 Identities=16% Similarity=0.191 Sum_probs=156.2
Q ss_pred CCCceeEEEecC-CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCC-CCCCHHHHHHHHHHH
Q 012188 168 DCDCKFCTCWSS-SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD-SLYTVREHLDMIEKS 245 (468)
Q Consensus 168 d~~~~~~~~~~~-~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~-~~~t~~~~~~di~~~ 245 (468)
|+..++|+.+++ ++|+|||+||++++...|..+++.|. ++|+|+++|+||||.|+.+.. ..++++++++|+ ..
T Consensus 11 ~g~~l~~~~~g~~~~~~ivllHG~~~~~~~w~~~~~~L~----~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl-~~ 85 (582)
T PRK05855 11 DGVRLAVYEWGDPDRPTVVLVHGYPDNHEVWDGVAPLLA----DRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDF-AA 85 (582)
T ss_pred CCEEEEEEEcCCCCCCeEEEEcCCCchHHHHHHHHHHhh----cceEEEEecCCCCCCCCCCCcccccCHHHHHHHH-HH
Confidence 566678877764 47899999999987776667888876 899999999999999986543 468999999999 68
Q ss_pred HhcccCCce-EEEEEEcccHHHHHHHHHh--CCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHH
Q 012188 246 VIEPNKVKS-FHIVAHSLGCILALALAVK--HPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMAC 322 (468)
Q Consensus 246 l~~~l~~~~-i~lvGhS~Gg~ial~~a~~--~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (468)
+++.++.++ ++|+||||||.+++.++.+ +++++..++.++++... . ...+....... ..........
T Consensus 86 ~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~---~--~~~~~~~~~~~---~~~~~~~~~~-- 155 (582)
T PRK05855 86 VIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLD---H--VGFWLRSGLRR---PTPRRLARAL-- 155 (582)
T ss_pred HHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchH---H--HHHHHhhcccc---cchhhhhHHH--
Confidence 999988765 9999999999999888776 24455555555443211 0 00011000000 0000000000
Q ss_pred HHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhh--hccccc---------cchhHHhhHhHHHhcccccccchHHH
Q 012188 323 WYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLL--EGFFCH---------THNAAWHTLHNIICGTANKLDGYLDA 391 (468)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (468)
................................... ...... ............. .......
T Consensus 156 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 227 (582)
T PRK05855 156 --GQLLRSWYIYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANM------IRSLSRP 227 (582)
T ss_pred --HHHhhhHHHHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhh------hhhhccC
Confidence 00000000000000000000000000000000000 000000 0000000000000 0000011
Q ss_pred hhccCCCcEEEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhcC
Q 012188 392 VRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSSS 459 (468)
Q Consensus 392 ~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~ 459 (468)
....+++|+++|+|++|.++|++..+.+.+.+|+.++++++ +||+++. |+|+++++.|.+|+++..
T Consensus 228 ~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~-~gH~~~~-e~p~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 228 RERYTDVPVQLIVPTGDPYVRPALYDDLSRWVPRLWRREIK-AGHWLPM-SHPQVLAAAVAEFVDAVE 293 (582)
T ss_pred ccCCccCceEEEEeCCCcccCHHHhccccccCCcceEEEcc-CCCcchh-hChhHHHHHHHHHHHhcc
Confidence 12357999999999999999999999998888999988887 6999997 999999999999998754
|
|
| >PLN02511 hydrolase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-22 Score=201.69 Aligned_cols=265 Identities=12% Similarity=0.138 Sum_probs=143.4
Q ss_pred cCCCCceeEEEec--------CCCCeEEEEecCCCCcc--chhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCH
Q 012188 166 WSDCDCKFCTCWS--------SSSRDTLFVKTQGPSAF--WTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTV 235 (468)
Q Consensus 166 ~~d~~~~~~~~~~--------~~~p~vl~lHG~g~s~~--~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~ 235 (468)
..||+.+.+ .|. .++|+||++||++++.. |...+...+. ++||+|+++|+||||.|+......+ .
T Consensus 78 ~~DG~~~~l-dw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~---~~g~~vv~~d~rG~G~s~~~~~~~~-~ 152 (388)
T PLN02511 78 TPDGGAVAL-DWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRAR---SKGWRVVVFNSRGCADSPVTTPQFY-S 152 (388)
T ss_pred CCCCCEEEE-EecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHH---HCCCEEEEEecCCCCCCCCCCcCEE-c
Confidence 346665543 341 34678999999866432 4433443332 3899999999999999975433222 1
Q ss_pred HHHHHHHH---HHHhcccCCceEEEEEEcccHHHHHHHHHhCCCc--cceEEEecCCCCCCCCCchhhHHHHHhhcCCCC
Q 012188 236 REHLDMIE---KSVIEPNKVKSFHIVAHSLGCILALALAVKHPGS--VKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRV 310 (468)
Q Consensus 236 ~~~~~di~---~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~--v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~ 310 (468)
..+++|+. ..+..+++..+++++||||||.+++.++.++|++ +.++++++++..... ........
T Consensus 153 ~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~----~~~~~~~~------ 222 (388)
T PLN02511 153 ASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVI----ADEDFHKG------ 222 (388)
T ss_pred CCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHH----HHHHHhcc------
Confidence 23344441 3444444446899999999999999999999987 889888887653200 00000000
Q ss_pred CchhhhhhhhHHHHHHHhhHHHHHhhccc-hhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchH
Q 012188 311 WPLIAFGASMACWYEHISRTICLLICKNH-RVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYL 389 (468)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (468)
.. ......+..............+.... .+.. ..........++ .+.+.... ..+.....++. ....
T Consensus 223 ~~-~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~f-d~~~t~~~--~gf~~~~~yy~------~~s~ 290 (388)
T PLN02511 223 FN-NVYDKALAKALRKIFAKHALLFEGLGGEYNI--PLVANAKTVRDF-DDGLTRVS--FGFKSVDAYYS------NSSS 290 (388)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHhhCCCccCH--HHHHhCCCHHHH-HHhhhhhc--CCCCCHHHHHH------HcCc
Confidence 00 00000000000000000000000000 0000 000000000000 00000000 00000000000 1112
Q ss_pred HHhhccCCCcEEEEeeCCCCccChhhH-HHHHHhCCCCeEEEecCCCccccccCcHHH------HHHHHHHHHhhc
Q 012188 390 DAVRNHVKCDVNVFHGEDDELIPVECS-YNVQRKIPRARVKVIEKKDHITIVVGRQKT------FARELEEIWRSS 458 (468)
Q Consensus 390 ~~~~~~i~~PvLii~G~~D~~vp~~~~-~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~------~~~~i~~fl~~~ 458 (468)
...+.+|++|+|+|+|++|+++|.+.. ....+..|++++++++++||..++ |+|+. +.+.+.+|++..
T Consensus 291 ~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~~~l~~~~~gGH~~~~-E~p~~~~~~~w~~~~i~~Fl~~~ 365 (388)
T PLN02511 291 SDSIKHVRVPLLCIQAANDPIAPARGIPREDIKANPNCLLIVTPSGGHLGWV-AGPEAPFGAPWTDPVVMEFLEAL 365 (388)
T ss_pred hhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCCCEEEEECCCcceeccc-cCCCCCCCCccHHHHHHHHHHHH
Confidence 334678999999999999999998764 456677899999999999999998 88865 488999998764
|
|
| >COG1647 Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.5e-22 Score=170.11 Aligned_cols=226 Identities=15% Similarity=0.170 Sum_probs=151.5
Q ss_pred CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH--HHhcccCCceEEE
Q 012188 180 SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEK--SVIEPNKVKSFHI 257 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~--~l~~~l~~~~i~l 257 (468)
++..|||+||+.++..--+.+.+.|. ++||+|.+|.+||||..+... -..+.++|.+++.+ .-+...|.+.|.+
T Consensus 14 G~~AVLllHGFTGt~~Dvr~Lgr~L~---e~GyTv~aP~ypGHG~~~e~f-l~t~~~DW~~~v~d~Y~~L~~~gy~eI~v 89 (243)
T COG1647 14 GNRAVLLLHGFTGTPRDVRMLGRYLN---ENGYTVYAPRYPGHGTLPEDF-LKTTPRDWWEDVEDGYRDLKEAGYDEIAV 89 (243)
T ss_pred CCEEEEEEeccCCCcHHHHHHHHHHH---HCCceEecCCCCCCCCCHHHH-hcCCHHHHHHHHHHHHHHHHHcCCCeEEE
Confidence 34789999999998887777888887 689999999999999885322 13577777777642 2234457789999
Q ss_pred EEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHHhhc
Q 012188 258 VAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICK 337 (468)
Q Consensus 258 vGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (468)
+|-||||.+++.+|.++| ++++|.++++.....+... .+.++... +........
T Consensus 90 ~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~i-ie~~l~y~-----------------------~~~kk~e~k 143 (243)
T COG1647 90 VGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRII-IEGLLEYF-----------------------RNAKKYEGK 143 (243)
T ss_pred EeecchhHHHHHHHhhCC--ccceeeecCCcccccchhh-hHHHHHHH-----------------------HHhhhccCC
Confidence 999999999999999999 9999999988765333211 11111100 000000000
Q ss_pred cchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChhhHH
Q 012188 338 NHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSY 417 (468)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~ 417 (468)
+....+...+.+.... ......+... -......+..|..|+++++|++|+++|.+.+.
T Consensus 144 ~~e~~~~e~~~~~~~~--------------~~~~~~~~~~--------i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~ 201 (243)
T COG1647 144 DQEQIDKEMKSYKDTP--------------MTTTAQLKKL--------IKDARRSLDKIYSPTLVVQGRQDEMVPAESAN 201 (243)
T ss_pred CHHHHHHHHHHhhcch--------------HHHHHHHHHH--------HHHHHhhhhhcccchhheecccCCCCCHHHHH
Confidence 0000000000000000 0000000000 11223334688999999999999999999999
Q ss_pred HHHHhCC--CCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 418 NVQRKIP--RARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 418 ~l~~~~p--~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
.+++..- ..++.+++++||.+..+.+.+.+.+.+..||++
T Consensus 202 ~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 202 FIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred HHHHhccCCcceeEEEccCCceeecchhHHHHHHHHHHHhhC
Confidence 9999873 459999999999999888899999999999963
|
|
| >PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.1e-22 Score=184.18 Aligned_cols=225 Identities=22% Similarity=0.340 Sum_probs=134.9
Q ss_pred ceEEEECCCCCCCCCC---CCCCCCCHHHHHHHHHHHHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCC
Q 012188 212 YRLFAIDLLGFGRSPK---PTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPY 288 (468)
Q Consensus 212 y~Via~D~~G~G~S~~---~~~~~~t~~~~~~di~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~ 288 (468)
|+|+++|+||+|.|+. .....++.+++++++ ..++++++.++++++||||||.+++.+|.++|++|+++|+++++.
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~ 79 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADL-EALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPP 79 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHH-HHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESS
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHH-HHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeec
Confidence 7999999999999995 444778999999999 699999999999999999999999999999999999999999863
Q ss_pred CCCCCCchhhHHHHHhhcCCCCCch-hhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccc
Q 012188 289 YPVPKGAQASQYVMRKVAPRRVWPL-IAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTH 367 (468)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (468)
. ........ .+.. .................................+....................
T Consensus 80 ~--------~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (230)
T PF00561_consen 80 D--------LPDGLWNR----IWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAE 147 (230)
T ss_dssp H--------HHHHHHHH----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCH
T ss_pred c--------chhhhhHH----HHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHH
Confidence 0 00000000 0000 000000000000000000000000000000000000000000000000000000
Q ss_pred hhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHH
Q 012188 368 NAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTF 447 (468)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~ 447 (468)
......... ..............+.++++|+++++|++|.++|++....+.+.+|+.++++++++||+.+. +.|+++
T Consensus 148 ~~~~~~~~~--~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~GH~~~~-~~~~~~ 224 (230)
T PF00561_consen 148 TDAFDNMFW--NALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPNSQLVLIEGSGHFAFL-EGPDEF 224 (230)
T ss_dssp HHHHHHHHH--HHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTTEEEEEETTCCSTHHH-HSHHHH
T ss_pred HHHHhhhcc--ccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCCCEEEECCCCChHHHh-cCHHhh
Confidence 000000000 00001111222344578999999999999999999999999999999999999999999997 999999
Q ss_pred HHHHH
Q 012188 448 ARELE 452 (468)
Q Consensus 448 ~~~i~ 452 (468)
.+.|.
T Consensus 225 ~~~i~ 229 (230)
T PF00561_consen 225 NEIII 229 (230)
T ss_dssp HHHHH
T ss_pred hhhhc
Confidence 99875
|
; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A .... |
| >TIGR01607 PST-A Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.6e-22 Score=190.97 Aligned_cols=253 Identities=16% Similarity=0.200 Sum_probs=151.6
Q ss_pred CCCCceeEEEecC--CCCeEEEEecCCCCccch--------------------------hhhhhhccccCCCcceEEEEC
Q 012188 167 SDCDCKFCTCWSS--SSRDTLFVKTQGPSAFWT--------------------------ETLFPNFSSASKSTYRLFAID 218 (468)
Q Consensus 167 ~d~~~~~~~~~~~--~~p~vl~lHG~g~s~~~~--------------------------~~~~~~L~~~~~~gy~Via~D 218 (468)
.||..++++.|.+ .+.+|+++||.+.+..+. ..+++.|. ++||+|+++|
T Consensus 5 ~~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~---~~G~~V~~~D 81 (332)
T TIGR01607 5 KDGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFN---KNGYSVYGLD 81 (332)
T ss_pred CCCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHH---HCCCcEEEec
Confidence 4777899999954 456899999988866421 23556665 5899999999
Q ss_pred CCCCCCCCCCCC---CCCCHHHHHHHHHHHHhccc-----------------------C-CceEEEEEEcccHHHHHHHH
Q 012188 219 LLGFGRSPKPTD---SLYTVREHLDMIEKSVIEPN-----------------------K-VKSFHIVAHSLGCILALALA 271 (468)
Q Consensus 219 ~~G~G~S~~~~~---~~~t~~~~~~di~~~l~~~l-----------------------~-~~~i~lvGhS~Gg~ial~~a 271 (468)
+||||+|++... ...+++++++|+ ..+++.. . ..+++++||||||.+++.++
T Consensus 82 ~rGHG~S~~~~~~~g~~~~~~~~v~Dl-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~ 160 (332)
T TIGR01607 82 LQGHGESDGLQNLRGHINCFDDLVYDV-IQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLL 160 (332)
T ss_pred ccccCCCccccccccchhhHHHHHHHH-HHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHH
Confidence 999999976422 224788898888 4555432 1 35799999999999999998
Q ss_pred HhCCC--------ccceEEEecCCCCCCCCC-------chhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHHhh
Q 012188 272 VKHPG--------SVKSLTLLAPPYYPVPKG-------AQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLIC 336 (468)
Q Consensus 272 ~~~p~--------~v~~lVl~~p~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (468)
.++++ .++++|+++|+....... ......+++.+. ...+.+..... .++ .
T Consensus 161 ~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~--~~~p~~~~~~~--~~~-----------~ 225 (332)
T TIGR01607 161 ELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMS--RVFPTFRISKK--IRY-----------E 225 (332)
T ss_pred HHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHH--HHCCcccccCc--ccc-----------c
Confidence 77653 589999998875321100 000001111100 00000000000 000 0
Q ss_pred ccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccC--CCcEEEEeeCCCCccChh
Q 012188 337 KNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHV--KCDVNVFHGEDDELIPVE 414 (468)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~PvLii~G~~D~~vp~~ 414 (468)
..+ .... .+..+.+. ............++... .........+ ++|+|+++|++|.+++++
T Consensus 226 ~~~----~~~~--------~~~~Dp~~-~~~~~s~~~~~~l~~~~-----~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~ 287 (332)
T TIGR01607 226 KSP----YVND--------IIKFDKFR-YDGGITFNLASELIKAT-----DTLDCDIDYIPKDIPILFIHSKGDCVCSYE 287 (332)
T ss_pred cCh----hhhh--------HHhcCccc-cCCcccHHHHHHHHHHH-----HHHHhhHhhCCCCCCEEEEEeCCCCccCHH
Confidence 000 0000 00001110 00000111111111110 0011112334 799999999999999999
Q ss_pred hHHHHHHhC--CCCeEEEecCCCccccccCcHHHHHHHHHHHHh
Q 012188 415 CSYNVQRKI--PRARVKVIEKKDHITIVVGRQKTFARELEEIWR 456 (468)
Q Consensus 415 ~~~~l~~~~--p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~ 456 (468)
.++.+++.+ ++.+++++++++|.++.+..++++.+.|.+||+
T Consensus 288 ~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 288 GTVSFYNKLSISNKELHTLEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred HHHHHHHhccCCCcEEEEECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 999988765 578999999999999985568999999999985
|
These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. |
| >KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-20 Score=174.30 Aligned_cols=254 Identities=15% Similarity=0.196 Sum_probs=164.6
Q ss_pred CCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccC----Cce
Q 012188 179 SSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNK----VKS 254 (468)
Q Consensus 179 ~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~----~~~ 254 (468)
...|+++++||.-++..-|..+...|+..+ +-.|+++|.|.||.|+.... .+..++++|+ ..+++..+ ..+
T Consensus 50 ~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l--~~~v~~vd~RnHG~Sp~~~~--h~~~~ma~dv-~~Fi~~v~~~~~~~~ 124 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKENWRSVAKNLSRKL--GRDVYAVDVRNHGSSPKITV--HNYEAMAEDV-KLFIDGVGGSTRLDP 124 (315)
T ss_pred CCCCceEEecccccCCCCHHHHHHHhcccc--cCceEEEecccCCCCccccc--cCHHHHHHHH-HHHHHHcccccccCC
Confidence 457999999997666665557888888544 45999999999999987664 5688999999 68888764 579
Q ss_pred EEEEEEcccH-HHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHH
Q 012188 255 FHIVAHSLGC-ILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICL 333 (468)
Q Consensus 255 i~lvGhS~Gg-~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (468)
++++|||||| .+++..+..+|+.+..+|+++-.....+............+.....-... ..
T Consensus 125 ~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~--~~--------------- 187 (315)
T KOG2382|consen 125 VVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGV--SR--------------- 187 (315)
T ss_pred ceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccc--cc---------------
Confidence 9999999999 88888899999999999999843322222221222222222211111000 00
Q ss_pred HhhccchhHHHHHHHHhhhHHHHHhhhcccc--ccchhHHhhHhHHHhccccc--ccchHHHh-hccCCCcEEEEeeCCC
Q 012188 334 LICKNHRVWEFLAKLVTRNRIRTFLLEGFFC--HTHNAAWHTLHNIICGTANK--LDGYLDAV-RNHVKCDVNVFHGEDD 408 (468)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~i~~PvLii~G~~D 408 (468)
......+.+...........++..++.. ......|..-.+.+...... ...++..+ -.....||++++|.++
T Consensus 188 ---~rke~~~~l~~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S 264 (315)
T KOG2382|consen 188 ---GRKEALKSLIEVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQS 264 (315)
T ss_pred ---cHHHHHHHHHHHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCC
Confidence 0011112222233333444444444431 11112221111111110000 11111111 0344789999999999
Q ss_pred CccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 409 ELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 409 ~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
.++|.+.-..+...+|++++++++++|||++. |+|++|.+.|.+|+...
T Consensus 265 ~fv~~~~~~~~~~~fp~~e~~~ld~aGHwVh~-E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 265 KFVPDEHYPRMEKIFPNVEVHELDEAGHWVHL-EKPEEFIESISEFLEEP 313 (315)
T ss_pred CCcChhHHHHHHHhccchheeecccCCceeec-CCHHHHHHHHHHHhccc
Confidence 99999999999999999999999999999997 99999999999999654
|
|
| >PRK10985 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.1e-20 Score=179.40 Aligned_cols=252 Identities=10% Similarity=0.088 Sum_probs=138.8
Q ss_pred CCCeEEEEecCCCCcc--chhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCC---CCHHHHHHHHHHHHhcccCCce
Q 012188 180 SSRDTLFVKTQGPSAF--WTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSL---YTVREHLDMIEKSVIEPNKVKS 254 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~--~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~---~t~~~~~~di~~~l~~~l~~~~ 254 (468)
++|+||++||++++.. +...+...|. ++||+|+++|+||||.++...... ...+|....+ ..+.++++..+
T Consensus 57 ~~p~vll~HG~~g~~~~~~~~~~~~~l~---~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i-~~l~~~~~~~~ 132 (324)
T PRK10985 57 HKPRLVLFHGLEGSFNSPYAHGLLEAAQ---KRGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFL-RWLQREFGHVP 132 (324)
T ss_pred CCCEEEEeCCCCCCCcCHHHHHHHHHHH---HCCCEEEEEeCCCCCCCccCCcceECCCchHHHHHHH-HHHHHhCCCCC
Confidence 4689999999987532 3444556555 589999999999999875432211 2345544444 46666778789
Q ss_pred EEEEEEcccHHHHHHHHHhCCCc--cceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhh-hHHHHHHHhhHH
Q 012188 255 FHIVAHSLGCILALALAVKHPGS--VKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGAS-MACWYEHISRTI 331 (468)
Q Consensus 255 i~lvGhS~Gg~ial~~a~~~p~~--v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 331 (468)
++++||||||.+++.++.++++. +.++|+++++....... ........ .. .... .........+..
T Consensus 133 ~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~----~~~~~~~~------~~-~~~~l~~~l~~~~~~~~ 201 (324)
T PRK10985 133 TAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACS----YRMEQGFS------RV-YQRYLLNLLKANAARKL 201 (324)
T ss_pred EEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHH----HHHhhhHH------HH-HHHHHHHHHHHHHHHHH
Confidence 99999999999988888887654 89999999876431100 00000000 00 0000 000000000000
Q ss_pred HHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCcc
Q 012188 332 CLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELI 411 (468)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~v 411 (468)
.........-.+.......-..+.......+. .+......+. .......+.++++|+++|+|++|+++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~------g~~~~~~~y~------~~~~~~~l~~i~~P~lii~g~~D~~~ 269 (324)
T PRK10985 202 AAYPGTLPINLAQLKSVRRLREFDDLITARIH------GFADAIDYYR------QCSALPLLNQIRKPTLIIHAKDDPFM 269 (324)
T ss_pred HhccccccCCHHHHhcCCcHHHHhhhheeccC------CCCCHHHHHH------HCChHHHHhCCCCCEEEEecCCCCCC
Confidence 00000000000000000000000000000000 0000111111 01123445788999999999999999
Q ss_pred ChhhHHHHHHhCCCCeEEEecCCCccccccCc---H-HHHHHHHHHHHhhc
Q 012188 412 PVECSYNVQRKIPRARVKVIEKKDHITIVVGR---Q-KTFARELEEIWRSS 458 (468)
Q Consensus 412 p~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~---p-~~~~~~i~~fl~~~ 458 (468)
+.+....+.+..|++++.+++++||+.+++.. + .-.-+.+.+|++..
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~ 320 (324)
T PRK10985 270 THEVIPKPESLPPNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTY 320 (324)
T ss_pred ChhhChHHHHhCCCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHh
Confidence 99888888778899999999999999997322 2 23456677777543
|
|
| >TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.1e-19 Score=172.08 Aligned_cols=229 Identities=14% Similarity=0.052 Sum_probs=131.2
Q ss_pred CCCeEEEEecCCCCcc-c---hhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhccc-----
Q 012188 180 SSRDTLFVKTQGPSAF-W---TETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPN----- 250 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~-~---~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l----- 250 (468)
+++++|++||++.... + +..+.+.|+ ++||+|+++|+||||.|+... .+++++.+|+ .+.++.+
T Consensus 25 ~~~~vv~i~gg~~~~~g~~~~~~~la~~l~---~~G~~v~~~Dl~G~G~S~~~~---~~~~~~~~d~-~~~~~~l~~~~~ 97 (274)
T TIGR03100 25 HTTGVLIVVGGPQYRVGSHRQFVLLARRLA---EAGFPVLRFDYRGMGDSEGEN---LGFEGIDADI-AAAIDAFREAAP 97 (274)
T ss_pred CCCeEEEEeCCccccCCchhHHHHHHHHHH---HCCCEEEEeCCCCCCCCCCCC---CCHHHHHHHH-HHHHHHHHhhCC
Confidence 4568999998764221 1 223455555 579999999999999997543 3555666665 3443332
Q ss_pred CCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHH-Hh-
Q 012188 251 KVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEH-IS- 328 (468)
Q Consensus 251 ~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~- 328 (468)
+.++++++||||||.+++.+|.. +++|+++|+++|+........ ...... .+.. ..
T Consensus 98 g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~---~~~~~~------------------~~~~~~~~ 155 (274)
T TIGR03100 98 HLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQA---ASRIRH------------------YYLGQLLS 155 (274)
T ss_pred CCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccch---HHHHHH------------------HHHHHHhC
Confidence 56789999999999999999765 468999999998754321110 000000 0000 00
Q ss_pred -hHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCC
Q 012188 329 -RTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGED 407 (468)
Q Consensus 329 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~ 407 (468)
............+.. ..+.+.............. ........+...+..+++|+++++|++
T Consensus 156 ~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~l~~~~~P~ll~~g~~ 217 (274)
T TIGR03100 156 ADFWRKLLSGEVNLGS-SLRGLGDALLKARQKGDEV-----------------AHGGLAERMKAGLERFQGPVLFILSGN 217 (274)
T ss_pred hHHHHHhcCCCccHHH-HHHHHHHHHHhhhhcCCCc-----------------ccchHHHHHHHHHHhcCCcEEEEEcCc
Confidence 000000000000000 0000000000000000000 000012223334467799999999999
Q ss_pred CCccChhhH------HHHHHhC--CCCeEEEecCCCccccccCcHHHHHHHHHHHHh
Q 012188 408 DELIPVECS------YNVQRKI--PRARVKVIEKKDHITIVVGRQKTFARELEEIWR 456 (468)
Q Consensus 408 D~~vp~~~~------~~l~~~~--p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~ 456 (468)
|...+ +.. ..+.+.+ ++++++.+++++|++..++.++++.+.|.+||+
T Consensus 218 D~~~~-~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 218 DLTAQ-EFADSVLGEPAWRGALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWLR 273 (274)
T ss_pred chhHH-HHHHHhccChhhHHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHHh
Confidence 98864 222 4445545 899999999999998665667999999999995
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. |
| >PRK05077 frsA fermentation/respiration switch protein; Reviewed | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.5e-19 Score=177.35 Aligned_cols=229 Identities=11% Similarity=0.049 Sum_probs=136.1
Q ss_pred CCCceeEEEec----CCCCeEEEEecCCCCc-cchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHH
Q 012188 168 DCDCKFCTCWS----SSSRDTLFVKTQGPSA-FWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMI 242 (468)
Q Consensus 168 d~~~~~~~~~~----~~~p~vl~lHG~g~s~-~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di 242 (468)
++..+..+-+. ++.|+||++||+++.. ..+..+.+.|. ++||+|+++|+||||.|..... ..+......++
T Consensus 177 ~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La---~~Gy~vl~~D~pG~G~s~~~~~-~~d~~~~~~av 252 (414)
T PRK05077 177 GGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLA---PRGIAMLTIDMPSVGFSSKWKL-TQDSSLLHQAV 252 (414)
T ss_pred CCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHH---hCCCEEEEECCCCCCCCCCCCc-cccHHHHHHHH
Confidence 44345554442 2234555555544432 23334555555 5899999999999999965321 12344444444
Q ss_pred HHHHhcc--cCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhh
Q 012188 243 EKSVIEP--NKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASM 320 (468)
Q Consensus 243 ~~~l~~~--l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (468)
.+.+... ++.++++++||||||++++.+|..+|++++++|+++|+....... .... . ..+..
T Consensus 253 ld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~---~~~~-~------~~p~~------ 316 (414)
T PRK05077 253 LNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTD---PKRQ-Q------QVPEM------ 316 (414)
T ss_pred HHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcc---hhhh-h------hchHH------
Confidence 2333332 355799999999999999999999999999999999875321110 0000 0 00000
Q ss_pred HHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcE
Q 012188 321 ACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDV 400 (468)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pv 400 (468)
....+.. .+.......+ .+. ..+.......... ...++++|+
T Consensus 317 --~~~~la~----~lg~~~~~~~---------~l~--------------------~~l~~~sl~~~~~---l~~~i~~Pv 358 (414)
T PRK05077 317 --YLDVLAS----RLGMHDASDE---------ALR--------------------VELNRYSLKVQGL---LGRRCPTPM 358 (414)
T ss_pred --HHHHHHH----HhCCCCCChH---------HHH--------------------HHhhhccchhhhh---hccCCCCcE
Confidence 0000000 0000000000 000 0000000000000 114689999
Q ss_pred EEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 401 NVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 401 Lii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
|+|+|++|.++|++.++.+.+.+|+.++++++++ ++. +.++++.+.+.+||++.
T Consensus 359 LiI~G~~D~ivP~~~a~~l~~~~~~~~l~~i~~~---~~~-e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 359 LSGYWKNDPFSPEEDSRLIASSSADGKLLEIPFK---PVY-RNFDKALQEISDWLEDR 412 (414)
T ss_pred EEEecCCCCCCCHHHHHHHHHhCCCCeEEEccCC---Ccc-CCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999986 343 79999999999999763
|
|
| >PRK13604 luxD acyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.9e-18 Score=161.33 Aligned_cols=207 Identities=11% Similarity=0.067 Sum_probs=124.3
Q ss_pred CCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCC-CCCCCCCC---CCCCHHHHHHHHHHHHhcccCCceEE
Q 012188 181 SRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGF-GRSPKPTD---SLYTVREHLDMIEKSVIEPNKVKSFH 256 (468)
Q Consensus 181 ~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~-G~S~~~~~---~~~t~~~~~~di~~~l~~~l~~~~i~ 256 (468)
.++||++||++.....+..+...|. ++||.|+.+|.||+ |.|++... ......|....+ +.+.+ .+.++++
T Consensus 37 ~~~vIi~HGf~~~~~~~~~~A~~La---~~G~~vLrfD~rg~~GeS~G~~~~~t~s~g~~Dl~aai-d~lk~-~~~~~I~ 111 (307)
T PRK13604 37 NNTILIASGFARRMDHFAGLAEYLS---SNGFHVIRYDSLHHVGLSSGTIDEFTMSIGKNSLLTVV-DWLNT-RGINNLG 111 (307)
T ss_pred CCEEEEeCCCCCChHHHHHHHHHHH---HCCCEEEEecCCCCCCCCCCccccCcccccHHHHHHHH-HHHHh-cCCCceE
Confidence 3789999999987654556777776 68999999999988 99976542 112233443334 34433 4567899
Q ss_pred EEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCC-CCCchhhhhhhhHHHHHHHhhHHHHHh
Q 012188 257 IVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPR-RVWPLIAFGASMACWYEHISRTICLLI 335 (468)
Q Consensus 257 lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (468)
|+||||||.+|+..|... .++++|+.+|.... ...+...+... ..++.....
T Consensus 112 LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l-------~d~l~~~~~~~~~~~p~~~lp------------------ 164 (307)
T PRK13604 112 LIAASLSARIAYEVINEI--DLSFLITAVGVVNL-------RDTLERALGYDYLSLPIDELP------------------ 164 (307)
T ss_pred EEEECHHHHHHHHHhcCC--CCCEEEEcCCcccH-------HHHHHHhhhcccccCcccccc------------------
Confidence 999999999997777643 39999998887643 11111111100 000000000
Q ss_pred hccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChhh
Q 012188 336 CKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVEC 415 (468)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~ 415 (468)
...+.....+. ...++ . .......... ....+...+++.|+|+|||++|.+||++.
T Consensus 165 ----~~~d~~g~~l~---~~~f~-~---------------~~~~~~~~~~-~s~i~~~~~l~~PvLiIHG~~D~lVp~~~ 220 (307)
T PRK13604 165 ----EDLDFEGHNLG---SEVFV-T---------------DCFKHGWDTL-DSTINKMKGLDIPFIAFTANNDSWVKQSE 220 (307)
T ss_pred ----ccccccccccc---HHHHH-H---------------HHHhcCcccc-ccHHHHHhhcCCCEEEEEcCCCCccCHHH
Confidence 00000000000 00000 0 0000000000 11122235678999999999999999999
Q ss_pred HHHHHHhCC--CCeEEEecCCCccccccCcHH
Q 012188 416 SYNVQRKIP--RARVKVIEKKDHITIVVGRQK 445 (468)
Q Consensus 416 ~~~l~~~~p--~~~l~~i~~~gH~~~~~e~p~ 445 (468)
++.+++.++ +.++++++|++|... |++-
T Consensus 221 s~~l~e~~~s~~kkl~~i~Ga~H~l~--~~~~ 250 (307)
T PRK13604 221 VIDLLDSIRSEQCKLYSLIGSSHDLG--ENLV 250 (307)
T ss_pred HHHHHHHhccCCcEEEEeCCCccccC--cchH
Confidence 999999885 689999999999976 5653
|
|
| >PRK11071 esterase YqiA; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=9.1e-19 Score=155.92 Aligned_cols=186 Identities=12% Similarity=0.129 Sum_probs=121.6
Q ss_pred CeEEEEecCCCCcc-chhh-hhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceEEEEE
Q 012188 182 RDTLFVKTQGPSAF-WTET-LFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVA 259 (468)
Q Consensus 182 p~vl~lHG~g~s~~-~~~~-~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i~lvG 259 (468)
|+|||+||++++.. |... +.+.+.. ...+|+|+++|+|||| ++.++++ ..++++++.++++++|
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~-~~~~~~v~~~dl~g~~------------~~~~~~l-~~l~~~~~~~~~~lvG 67 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQ-HHPDIEMIVPQLPPYP------------ADAAELL-ESLVLEHGGDPLGLVG 67 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHH-hCCCCeEEeCCCCCCH------------HHHHHHH-HHHHHHcCCCCeEEEE
Confidence 68999999988666 4422 3344431 1147999999999984 3577777 6888889989999999
Q ss_pred EcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHHhhccc
Q 012188 260 HSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKNH 339 (468)
Q Consensus 260 hS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (468)
|||||++++.+|.++|. ++|+++|+..+ ............. +... . ..
T Consensus 68 ~S~Gg~~a~~~a~~~~~---~~vl~~~~~~~-------~~~~~~~~~~~~~-~~~~--~-------------------~~ 115 (190)
T PRK11071 68 SSLGGYYATWLSQCFML---PAVVVNPAVRP-------FELLTDYLGENEN-PYTG--Q-------------------QY 115 (190)
T ss_pred ECHHHHHHHHHHHHcCC---CEEEECCCCCH-------HHHHHHhcCCccc-ccCC--C-------------------cE
Confidence 99999999999999993 46888886542 1111111111000 0000 0 00
Q ss_pred hhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChhhHHHH
Q 012188 340 RVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNV 419 (468)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l 419 (468)
. +.. .+ +.... . ..... + ...+|++++||++|.++|++.+.++
T Consensus 116 ~--------~~~----~~----------------~~d~~-----~--~~~~~-i-~~~~~v~iihg~~De~V~~~~a~~~ 158 (190)
T PRK11071 116 V--------LES----RH----------------IYDLK-----V--MQIDP-L-ESPDLIWLLQQTGDEVLDYRQAVAY 158 (190)
T ss_pred E--------EcH----HH----------------HHHHH-----h--cCCcc-C-CChhhEEEEEeCCCCcCCHHHHHHH
Confidence 0 000 00 00000 0 00011 1 2467899999999999999999999
Q ss_pred HHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHh
Q 012188 420 QRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWR 456 (468)
Q Consensus 420 ~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~ 456 (468)
++. +++++++|++|... ..+++.+.+.+|+.
T Consensus 159 ~~~---~~~~~~~ggdH~f~---~~~~~~~~i~~fl~ 189 (190)
T PRK11071 159 YAA---CRQTVEEGGNHAFV---GFERYFNQIVDFLG 189 (190)
T ss_pred HHh---cceEEECCCCcchh---hHHHhHHHHHHHhc
Confidence 884 47778899999863 44889999999974
|
|
| >PRK10566 esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.6e-18 Score=162.08 Aligned_cols=203 Identities=13% Similarity=0.154 Sum_probs=121.5
Q ss_pred CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCC-CC---------CCHHHHHHHHHHHHhcc
Q 012188 180 SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD-SL---------YTVREHLDMIEKSVIEP 249 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~-~~---------~t~~~~~~di~~~l~~~ 249 (468)
+.|+||++||++++...+..+...|. ++||+|+++|+||||.+..... .. .+.+++.+.+ ..+.+.
T Consensus 26 ~~p~vv~~HG~~~~~~~~~~~~~~l~---~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~ 101 (249)
T PRK10566 26 PLPTVFFYHGFTSSKLVYSYFAVALA---QAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLR-AAIREE 101 (249)
T ss_pred CCCEEEEeCCCCcccchHHHHHHHHH---hCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHH-HHHHhc
Confidence 35899999999887766656667766 5799999999999998642211 00 1123333333 344433
Q ss_pred --cCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHH
Q 012188 250 --NKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHI 327 (468)
Q Consensus 250 --l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (468)
.+.++++++||||||.+++.++.++|+....+++.++... ........+.. ...
T Consensus 102 ~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~-~~~-------------- 157 (249)
T PRK10566 102 GWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYF---------TSLARTLFPPL-IPE-------------- 157 (249)
T ss_pred CCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHH---------HHHHHHhcccc-ccc--------------
Confidence 3457899999999999999999999874444444443211 00000000000 000
Q ss_pred hhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccC-CCcEEEEeeC
Q 012188 328 SRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHV-KCDVNVFHGE 406 (468)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~PvLii~G~ 406 (468)
...... ...... ..+ .. ......+.++ ++|+|++||+
T Consensus 158 ----------~~~~~~---------~~~~~~-------------~~~--------~~--~~~~~~~~~i~~~P~Lii~G~ 195 (249)
T PRK10566 158 ----------TAAQQA---------EFNNIV-------------APL--------AE--WEVTHQLEQLADRPLLLWHGL 195 (249)
T ss_pred ----------ccccHH---------HHHHHH-------------HHH--------hh--cChhhhhhhcCCCCEEEEEcC
Confidence 000000 000000 000 00 0011112344 6899999999
Q ss_pred CCCccChhhHHHHHHhCCC------CeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 407 DDELIPVECSYNVQRKIPR------ARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 407 ~D~~vp~~~~~~l~~~~p~------~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
+|.++|++.++.+.+.++. +++++++++||... + ...+.+.+||++
T Consensus 196 ~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~----~-~~~~~~~~fl~~ 247 (249)
T PRK10566 196 ADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT----P-EALDAGVAFFRQ 247 (249)
T ss_pred CCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC----H-HHHHHHHHHHHh
Confidence 9999999999999887742 47788999999853 2 457888889875
|
|
| >TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.4e-18 Score=170.58 Aligned_cols=256 Identities=15% Similarity=0.168 Sum_probs=141.2
Q ss_pred CCeEEEEecCCCCccch-----hhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHH-H---HHHHhcccC
Q 012188 181 SRDTLFVKTQGPSAFWT-----ETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDM-I---EKSVIEPNK 251 (468)
Q Consensus 181 ~p~vl~lHG~g~s~~~~-----~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~d-i---~~~l~~~l~ 251 (468)
++|||++||...+.+.. ..+.+.|. ++||+|+++|++|+|.|+.. .++++++.+ + ...+++..+
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~---~~G~~V~~~D~~g~g~s~~~----~~~~d~~~~~~~~~v~~l~~~~~ 134 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVRGLL---ERGQDVYLIDWGYPDRADRY----LTLDDYINGYIDKCVDYICRTSK 134 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHHHHH---HCCCeEEEEeCCCCCHHHhc----CCHHHHHHHHHHHHHHHHHHHhC
Confidence 46899999975543322 24666665 58999999999999987643 355555432 2 146777788
Q ss_pred CceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhh------cCCCCCchhhhhhhhHHHHH
Q 012188 252 VKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKV------APRRVWPLIAFGASMACWYE 325 (468)
Q Consensus 252 ~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 325 (468)
.++++++||||||.+++.++..+|++++++|+++++............. .+.. ......+. .+..
T Consensus 135 ~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~--------~~~~ 205 (350)
T TIGR01836 135 LDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNW-ARHVDIDLAVDTMGNIPG--------ELLN 205 (350)
T ss_pred CCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhh-ccccCHHHHHHhcCCCCH--------HHHH
Confidence 8999999999999999999999999999999999887643322111111 0000 00000000 0000
Q ss_pred HHhhHHHHHhhccchhHHH---HHHH-HhhhHHHHHh-hhccccc----cchhHHhhHhHHHhcccccccc----hHHHh
Q 012188 326 HISRTICLLICKNHRVWEF---LAKL-VTRNRIRTFL-LEGFFCH----THNAAWHTLHNIICGTANKLDG----YLDAV 392 (468)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 392 (468)
.. ...+......+.. .... ...+....+. ...+... ........+..++......... .....
T Consensus 206 ~~----f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g~~~~~~~~~~ 281 (350)
T TIGR01836 206 LT----FLMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLINGEVEIGGRKVD 281 (350)
T ss_pred HH----HHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCCeeEECCEEcc
Confidence 00 0000000000000 0000 0000000000 0000000 0000001111111111000000 00112
Q ss_pred hccCCCcEEEEeeCCCCccChhhHHHHHHhCCC--CeEEEecCCCccccccCc--HHHHHHHHHHHHhh
Q 012188 393 RNHVKCDVNVFHGEDDELIPVECSYNVQRKIPR--ARVKVIEKKDHITIVVGR--QKTFARELEEIWRS 457 (468)
Q Consensus 393 ~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~--~~l~~i~~~gH~~~~~e~--p~~~~~~i~~fl~~ 457 (468)
+.++++|+++++|++|.++|++.++.+.+.+++ .++++++ +||..++.+. ++++.+.|.+|+++
T Consensus 282 l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 282 LKNIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred HHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHHHHh
Confidence 457899999999999999999999999998874 4667777 6888876333 58899999999965
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. |
| >PLN02872 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.8e-18 Score=168.80 Aligned_cols=280 Identities=16% Similarity=0.085 Sum_probs=151.7
Q ss_pred CCcCCCCceeEEEec--------CCCCeEEEEecCCCCccchh------hhhhhccccCCCcceEEEECCCCCCCCCC--
Q 012188 164 PRWSDCDCKFCTCWS--------SSSRDTLFVKTQGPSAFWTE------TLFPNFSSASKSTYRLFAIDLLGFGRSPK-- 227 (468)
Q Consensus 164 ~r~~d~~~~~~~~~~--------~~~p~vl~lHG~g~s~~~~~------~~~~~L~~~~~~gy~Via~D~~G~G~S~~-- 227 (468)
.+..||..+.++... .++|+||++||++.+...|. .+...|+ ++||+|+++|+||+|.|.+
T Consensus 49 v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La---~~GydV~l~n~RG~~~s~gh~ 125 (395)
T PLN02872 49 IQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILA---DHGFDVWVGNVRGTRWSYGHV 125 (395)
T ss_pred EECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHH---hCCCCcccccccccccccCCC
Confidence 344677777777652 23679999999876554331 1222233 5799999999999886632
Q ss_pred --C-CC---CCCCHHHHH-HHHHHHHhccc---CCceEEEEEEcccHHHHHHHHHhCCC---ccceEEEecCCCCCCCCC
Q 012188 228 --P-TD---SLYTVREHL-DMIEKSVIEPN---KVKSFHIVAHSLGCILALALAVKHPG---SVKSLTLLAPPYYPVPKG 294 (468)
Q Consensus 228 --~-~~---~~~t~~~~~-~di~~~l~~~l---~~~~i~lvGhS~Gg~ial~~a~~~p~---~v~~lVl~~p~~~~~~~~ 294 (468)
. .. ..+++++++ .|+ .++++.+ ..++++++||||||.+++.++ .+|+ +|+.+++++|........
T Consensus 126 ~~~~~~~~fw~~s~~e~a~~Dl-~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~~~~~~ 203 (395)
T PLN02872 126 TLSEKDKEFWDWSWQELALYDL-AEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISYLDHVT 203 (395)
T ss_pred CCCccchhccCCcHHHHHHHHH-HHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhhhccCC
Confidence 1 11 136777777 577 4666543 347999999999999998555 6786 689999999876543222
Q ss_pred chhhHHHHH--------hhcCCCCCchhhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHH-------HhhhHHHHHhh
Q 012188 295 AQASQYVMR--------KVAPRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKL-------VTRNRIRTFLL 359 (468)
Q Consensus 295 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~ 359 (468)
......+.. .+......+.. ..+ ..+... +|.....-...... +.......++.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~----~~~~~~----~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~~~ 272 (395)
T PLN02872 204 APLVLRMVFMHLDQMVVAMGIHQLNFRS---DVL----VKLLDS----ICEGHMDCNDLLTSITGTNCCFNASRIDYYLE 272 (395)
T ss_pred CHHHHHHHHHhHHHHHHHhcCceecCCc---HHH----HHHHHH----HccCchhHHHHHHHHhCCCcccchhhhhHHHh
Confidence 111111110 00000000000 000 001011 11100000000000 00001100000
Q ss_pred hccccccchhHHhhHhHHHh-cccccccc-------------hHHHhhccC--CCcEEEEeeCCCCccChhhHHHHHHhC
Q 012188 360 EGFFCHTHNAAWHTLHNIIC-GTANKLDG-------------YLDAVRNHV--KCDVNVFHGEDDELIPVECSYNVQRKI 423 (468)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-------------~~~~~~~~i--~~PvLii~G~~D~~vp~~~~~~l~~~~ 423 (468)
. .-..........+..++. +.....+. -..-.+.++ ++|+++++|++|.+++++.++.+.+.+
T Consensus 273 ~-~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~L 351 (395)
T PLN02872 273 Y-EPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAEL 351 (395)
T ss_pred c-CCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHC
Confidence 0 000000111111111111 11111110 001113455 589999999999999999999999999
Q ss_pred CC-CeEEEecCCCcc--ccccCcHHHHHHHHHHHHhhcCC
Q 012188 424 PR-ARVKVIEKKDHI--TIVVGRQKTFARELEEIWRSSSG 460 (468)
Q Consensus 424 p~-~~l~~i~~~gH~--~~~~e~p~~~~~~i~~fl~~~~~ 460 (468)
|+ .+++.+++++|. .+.++.|+++.+.|.+|+++...
T Consensus 352 p~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~~ 391 (395)
T PLN02872 352 PSKPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLGK 391 (395)
T ss_pred CCccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhhh
Confidence 87 688899999996 33358899999999999986443
|
|
| >COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.6e-17 Score=153.05 Aligned_cols=288 Identities=14% Similarity=0.156 Sum_probs=179.8
Q ss_pred CCCceeEEEecCC----CCeEEEEecCCCC---c--------cchhhhhhhccccCCCcceEEEECCCCCC-CCCCCCC-
Q 012188 168 DCDCKFCTCWSSS----SRDTLFVKTQGPS---A--------FWTETLFPNFSSASKSTYRLFAIDLLGFG-RSPKPTD- 230 (468)
Q Consensus 168 d~~~~~~~~~~~~----~p~vl~lHG~g~s---~--------~~~~~~~~~L~~~~~~gy~Via~D~~G~G-~S~~~~~- 230 (468)
+...+.|+.|+.- ...||++||+.++ . -||+.++..=...--..|.||+.|..|.+ .|++|..
T Consensus 34 ~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~ 113 (368)
T COG2021 34 SDARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSI 113 (368)
T ss_pred cCcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCc
Confidence 3456788888532 4589999998772 1 27776664322222478999999999976 3433321
Q ss_pred -----------CCCCHHHHHHHHHHHHhcccCCceEE-EEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhh
Q 012188 231 -----------SLYTVREHLDMIEKSVIEPNKVKSFH-IVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQAS 298 (468)
Q Consensus 231 -----------~~~t~~~~~~di~~~l~~~l~~~~i~-lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~ 298 (468)
..++++|++..- +.+++++|++++. +||-||||+.|+.++..||++|++++.++......+......
T Consensus 114 ~p~g~~yg~~FP~~ti~D~V~aq-~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia~~ 192 (368)
T COG2021 114 NPGGKPYGSDFPVITIRDMVRAQ-RLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIAFN 192 (368)
T ss_pred CCCCCccccCCCcccHHHHHHHH-HHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHHHH
Confidence 246889999888 7899999999977 899999999999999999999999999998665544333323
Q ss_pred HHHHHhhcCCCCCchhhhhh-hhHHHHHHHhhHHHHHhhccchhHHHH-HH------------HHhhhHHHHHhhhcccc
Q 012188 299 QYVMRKVAPRRVWPLIAFGA-SMACWYEHISRTICLLICKNHRVWEFL-AK------------LVTRNRIRTFLLEGFFC 364 (468)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------------~~~~~~~~~~~~~~~~~ 364 (468)
......+.....|....... ..+.---.+.+.+.....+....++.. .+ .+.-+.+..+..+.+..
T Consensus 193 ~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~~ 272 (368)
T COG2021 193 EVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKFVA 272 (368)
T ss_pred HHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHHHh
Confidence 33344444444552221100 000001111122221222222111111 11 11222222333333333
Q ss_pred ccchhHHhhHhHHHhccccc-ccchHHHhhccCCCcEEEEeeCCCCccChhhHHHHHHhCCCCe-EEEec-CCCcccccc
Q 012188 365 HTHNAAWHTLHNIICGTANK-LDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRAR-VKVIE-KKDHITIVV 441 (468)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~~~-l~~i~-~~gH~~~~~ 441 (468)
....+....+...+...... -...+...++++++|++++.-+.|.+.|++..+++.+.++.+. +++++ ..||..++
T Consensus 273 rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~~i~S~~GHDaFL- 351 (368)
T COG2021 273 RFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGALREIDSPYGHDAFL- 351 (368)
T ss_pred ccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCceEEecCCCCchhhh-
Confidence 33333333333333222211 1245666678999999999999999999999999999998876 76664 57999998
Q ss_pred CcHHHHHHHHHHHHhh
Q 012188 442 GRQKTFARELEEIWRS 457 (468)
Q Consensus 442 e~p~~~~~~i~~fl~~ 457 (468)
...+.+...|..||+.
T Consensus 352 ~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 352 VESEAVGPLIRKFLAL 367 (368)
T ss_pred cchhhhhHHHHHHhhc
Confidence 6777899999999964
|
|
| >KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.9e-18 Score=151.20 Aligned_cols=210 Identities=16% Similarity=0.227 Sum_probs=145.1
Q ss_pred CCcCCCCceeEEEecC---CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHH
Q 012188 164 PRWSDCDCKFCTCWSS---SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLD 240 (468)
Q Consensus 164 ~r~~d~~~~~~~~~~~---~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~ 240 (468)
.+.+.|+.+.+..+.+ ..+++|+.||..........++-.|+. .-+++|+.+|++|+|.|.+.+... ...+.++
T Consensus 40 ~~t~rgn~~~~~y~~~~~~~~~~lly~hGNa~Dlgq~~~~~~~l~~--~ln~nv~~~DYSGyG~S~G~psE~-n~y~Di~ 116 (258)
T KOG1552|consen 40 VKTSRGNEIVCMYVRPPEAAHPTLLYSHGNAADLGQMVELFKELSI--FLNCNVVSYDYSGYGRSSGKPSER-NLYADIK 116 (258)
T ss_pred eecCCCCEEEEEEEcCccccceEEEEcCCcccchHHHHHHHHHHhh--cccceEEEEecccccccCCCcccc-cchhhHH
Confidence 3444555666666632 348999999984322211112222320 138999999999999999877644 3344444
Q ss_pred HHHHHHhcccC-CceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhh
Q 012188 241 MIEKSVIEPNK-VKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGAS 319 (468)
Q Consensus 241 di~~~l~~~l~-~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (468)
.+...+.+..| .++++|+|+|+|+..++.+|.++| ++++||.+|.... ++.+.+..
T Consensus 117 avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~-----------~rv~~~~~---------- 173 (258)
T KOG1552|consen 117 AVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSG-----------MRVAFPDT---------- 173 (258)
T ss_pred HHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhh-----------hhhhccCc----------
Confidence 44357777785 789999999999999999999999 9999999986532 00000000
Q ss_pred hHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCc
Q 012188 320 MACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCD 399 (468)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 399 (468)
...+..+.+ .. .+..+.++||
T Consensus 174 ----------------------------------~~~~~~d~f--------------------~~-----i~kI~~i~~P 194 (258)
T KOG1552|consen 174 ----------------------------------KTTYCFDAF--------------------PN-----IEKISKITCP 194 (258)
T ss_pred ----------------------------------ceEEeeccc--------------------cc-----cCcceeccCC
Confidence 000000000 00 1123678999
Q ss_pred EEEEeeCCCCccChhhHHHHHHhCCCC-eEEEecCCCccccccCcHHHHHHHHHHHHhhcCC
Q 012188 400 VNVFHGEDDELIPVECSYNVQRKIPRA-RVKVIEKKDHITIVVGRQKTFARELEEIWRSSSG 460 (468)
Q Consensus 400 vLii~G~~D~~vp~~~~~~l~~~~p~~-~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~~ 460 (468)
+|++||++|.++|......+.+..++. +-.++.|+||... +...++.+.+.+|+.....
T Consensus 195 VLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~--~~~~~yi~~l~~f~~~~~~ 254 (258)
T KOG1552|consen 195 VLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDI--ELYPEYIEHLRRFISSVLP 254 (258)
T ss_pred EEEEecccCceecccccHHHHHhccccCCCcEEecCCCccc--ccCHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999876 8899999999976 6778899999999976543
|
|
| >COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.78 E-value=2e-17 Score=153.98 Aligned_cols=256 Identities=22% Similarity=0.292 Sum_probs=143.5
Q ss_pred EEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCc
Q 012188 174 CTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVK 253 (468)
Q Consensus 174 ~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~ 253 (468)
+...+..+|+++++||++++...+......+...... |+++++|+||||.|. .. .+....+++++ ..+++.++..
T Consensus 14 ~~~~~~~~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~g~g~s~-~~--~~~~~~~~~~~-~~~~~~~~~~ 88 (282)
T COG0596 14 YREAGGGGPPLVLLHGFPGSSSVWRPVFKVLPALAAR-YRVIAPDLRGHGRSD-PA--GYSLSAYADDL-AALLDALGLE 88 (282)
T ss_pred EeecCCCCCeEEEeCCCCCchhhhHHHHHHhhccccc-eEEEEecccCCCCCC-cc--cccHHHHHHHH-HHHHHHhCCC
Confidence 3333333669999999987655443322333311123 999999999999997 11 34555558888 6889999988
Q ss_pred eEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchh--------hHHHHHhhcCCCCCchhhhhhhhHHHHH
Q 012188 254 SFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQA--------SQYVMRKVAPRRVWPLIAFGASMACWYE 325 (468)
Q Consensus 254 ~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (468)
++.++||||||.+++.++.++|+.++++|++++........... .......... .. .. ....+..
T Consensus 89 ~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~----~~~~~~~ 161 (282)
T COG0596 89 KVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLG-LD--AA----AFAALLA 161 (282)
T ss_pred ceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhc-cc--hh----hhhhhhh
Confidence 89999999999999999999999999999999765411110000 0000000000 00 00 0000000
Q ss_pred HHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhH-HHhccc-ccccchHHHhhccCCCcEEEE
Q 012188 326 HISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHN-IICGTA-NKLDGYLDAVRNHVKCDVNVF 403 (468)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~i~~PvLii 403 (468)
... ........ .......... ..... .....+..... ...... .............+++|++++
T Consensus 162 ~~~--~~~~~~~~--~~~~~~~~~~-~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i 227 (282)
T COG0596 162 ALG--LLAALAAA--ARAGLAEALR-APLLG---------AAAAAFARAARADLAAALLALLDRDLRAALARITVPTLII 227 (282)
T ss_pred ccc--cccccccc--chhccccccc-cccch---------hHhhhhhhhcccccchhhhcccccccchhhccCCCCeEEE
Confidence 000 00000000 0000000000 00000 00000000000 000000 000001223346778999999
Q ss_pred eeCCCCccChhhHHHHHHhCCC-CeEEEecCCCccccccCcHHHHHHHHHHHHh
Q 012188 404 HGEDDELIPVECSYNVQRKIPR-ARVKVIEKKDHITIVVGRQKTFARELEEIWR 456 (468)
Q Consensus 404 ~G~~D~~vp~~~~~~l~~~~p~-~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~ 456 (468)
+|++|.+.|......+.+..++ .++.+++++||+++. ++|+.+.+.+.+|++
T Consensus 228 ~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~p~~~~~~i~~~~~ 280 (282)
T COG0596 228 HGEDDPVVPAELARRLAAALPNDARLVVIPGAGHFPHL-EAPEAFAAALLAFLE 280 (282)
T ss_pred ecCCCCcCCHHHHHHHHhhCCCCceEEEeCCCCCcchh-hcHHHHHHHHHHHHh
Confidence 9999977777667777788885 999999999999998 999999999988553
|
|
| >TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.5e-17 Score=168.19 Aligned_cols=248 Identities=16% Similarity=0.128 Sum_probs=140.4
Q ss_pred CCCeEEEEecCCCCccchh-----hhhhhccccCCCcceEEEECCCCCCCCCCCCC-CCCCHHHHHHHHHHHHhcccCCc
Q 012188 180 SSRDTLFVKTQGPSAFWTE-----TLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD-SLYTVREHLDMIEKSVIEPNKVK 253 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~~-----~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~-~~~t~~~~~~di~~~l~~~l~~~ 253 (468)
.++|||++||+....+.++ .++..|. ++||+|+++|++|+|.|..... ..|..+.+.+++ +.+++.++.+
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~---~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al-~~v~~~~g~~ 262 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLV---EQGHTVFVISWRNPDASQADKTFDDYIRDGVIAAL-EVVEAITGEK 262 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHH---HCCcEEEEEECCCCCcccccCChhhhHHHHHHHHH-HHHHHhcCCC
Confidence 3689999999876544222 3566565 5899999999999999865432 345555566677 6888889999
Q ss_pred eEEEEEEcccHHHH---H-HHHHhC-CCccceEEEecCCCCCCCCCchh-------hHHHHHhhcCCCCCchhhhhhhhH
Q 012188 254 SFHIVAHSLGCILA---L-ALAVKH-PGSVKSLTLLAPPYYPVPKGAQA-------SQYVMRKVAPRRVWPLIAFGASMA 321 (468)
Q Consensus 254 ~i~lvGhS~Gg~ia---l-~~a~~~-p~~v~~lVl~~p~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 321 (468)
+++++||||||.++ + .+++.+ |++++++++++++......+... ...+.+.+......+... +.
T Consensus 263 kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~lpg~~----m~ 338 (532)
T TIGR01838 263 QVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGYLDGRQ----MA 338 (532)
T ss_pred CeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCCCCHHH----HH
Confidence 99999999999985 2 245555 78999999999876653332211 001111111111111111 00
Q ss_pred HHHHHHhhHHHHHhhccchhHHHHHH-HHhhhHHHHHhhhcccccc----chhHHhhHhHHHhccccc---c-cchHHHh
Q 012188 322 CWYEHISRTICLLICKNHRVWEFLAK-LVTRNRIRTFLLEGFFCHT----HNAAWHTLHNIICGTANK---L-DGYLDAV 392 (468)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~---~-~~~~~~~ 392 (468)
..+.. +..+...|..... .+..+....+-...+..+. .......+.+++...... + -......
T Consensus 339 ~~F~~--------lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~d 410 (532)
T TIGR01838 339 VTFSL--------LRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRLD 410 (532)
T ss_pred HHHHh--------cChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEecc
Confidence 00000 0000011111100 0000000000000000000 001111111222111110 0 0111234
Q ss_pred hccCCCcEEEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcH
Q 012188 393 RNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQ 444 (468)
Q Consensus 393 ~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p 444 (468)
+.+|++|+++++|++|.++|++.++.+.+.+++.+..+++++||..++ ++|
T Consensus 411 L~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~~~~~~vL~~sGHi~~i-enP 461 (532)
T TIGR01838 411 LSKVKVPVYIIATREDHIAPWQSAYRGAALLGGPKTFVLGESGHIAGV-VNP 461 (532)
T ss_pred hhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCCCCEEEEECCCCCchHh-hCC
Confidence 578899999999999999999999999999999999999999999987 555
|
This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.9e-17 Score=181.51 Aligned_cols=267 Identities=17% Similarity=0.175 Sum_probs=146.1
Q ss_pred CCCeEEEEecCCCCccchhhh-----hhhccccCCCcceEEEECCCCCCCCCCCCC-CCCCHHHHHHHHHHHHhcc---c
Q 012188 180 SSRDTLFVKTQGPSAFWTETL-----FPNFSSASKSTYRLFAIDLLGFGRSPKPTD-SLYTVREHLDMIEKSVIEP---N 250 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~~~~-----~~~L~~~~~~gy~Via~D~~G~G~S~~~~~-~~~t~~~~~~di~~~l~~~---l 250 (468)
.++||||+||++.+.+.|+.. ++.|. ++||+|+++| +|.++.+.. ..+++.+++..+. ..++. .
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~---~~g~~v~~~d---~G~~~~~~~~~~~~l~~~i~~l~-~~l~~v~~~ 138 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILH---RAGLDPWVID---FGSPDKVEGGMERNLADHVVALS-EAIDTVKDV 138 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHH---HCCCEEEEEc---CCCCChhHcCccCCHHHHHHHHH-HHHHHHHHh
Confidence 568999999998877755433 56664 4799999999 466665433 2367788776663 33332 3
Q ss_pred CCceEEEEEEcccHHHHHHHHHhC-CCccceEEEecCCCCCCCCCchh-hHHH--------HHhhcCCCCCchhhh--hh
Q 012188 251 KVKSFHIVAHSLGCILALALAVKH-PGSVKSLTLLAPPYYPVPKGAQA-SQYV--------MRKVAPRRVWPLIAF--GA 318 (468)
Q Consensus 251 ~~~~i~lvGhS~Gg~ial~~a~~~-p~~v~~lVl~~p~~~~~~~~~~~-~~~~--------~~~~~~~~~~~~~~~--~~ 318 (468)
..++++++||||||.+++.+++.+ |++|+++|+++++.......... .... ...+......+.... +.
T Consensus 139 ~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 218 (994)
T PRK07868 139 TGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTGF 218 (994)
T ss_pred hCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHHH
Confidence 447899999999999999988755 56899999999876432211100 0000 000011111111000 00
Q ss_pred hhHHHHHHHhhHH--HHHhhccchhHHHHHHHHhhhHHHHHhhhc-cccccchhHHhhHhHHHhcccccc---c-chHHH
Q 012188 319 SMACWYEHISRTI--CLLICKNHRVWEFLAKLVTRNRIRTFLLEG-FFCHTHNAAWHTLHNIICGTANKL---D-GYLDA 391 (468)
Q Consensus 319 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~ 391 (468)
.+........... ...+..... .......+.+.... +...........+..+........ . .....
T Consensus 219 ~~l~p~~~~~~~~~~~~~l~~~~~-------~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~ 291 (994)
T PRK07868 219 QMLDPVKTAKARVDFLRQLHDREA-------LLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQMV 291 (994)
T ss_pred HhcChhHHHHHHHHHHHhcCchhh-------hccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEEc
Confidence 0000000000000 000000000 00000001111000 000000011111111111000000 0 00012
Q ss_pred hhccCCCcEEEEeeCCCCccChhhHHHHHHhCCCCeE-EEecCCCcccccc--CcHHHHHHHHHHHHhhcCC
Q 012188 392 VRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARV-KVIEKKDHITIVV--GRQKTFARELEEIWRSSSG 460 (468)
Q Consensus 392 ~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~~~l-~~i~~~gH~~~~~--e~p~~~~~~i~~fl~~~~~ 460 (468)
.+.++++|+|+|+|++|.++|++.++.+.+.+|++++ .+++++||+.++. .-++++...|.+||++...
T Consensus 292 ~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~~ 363 (994)
T PRK07868 292 TLADITCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLEG 363 (994)
T ss_pred chhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhcc
Confidence 3578899999999999999999999999999999997 6789999998863 4578899999999987543
|
|
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.2e-17 Score=142.39 Aligned_cols=144 Identities=24% Similarity=0.352 Sum_probs=111.0
Q ss_pred eEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceEEEEEEcc
Q 012188 183 DTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSL 262 (468)
Q Consensus 183 ~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i~lvGhS~ 262 (468)
+||++||++++...+..+...|+ ++||.|+.+|+||+|.+... ....+..+++ . .+..+.++++++|||+
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~---~~G~~v~~~~~~~~~~~~~~----~~~~~~~~~~-~--~~~~~~~~i~l~G~S~ 70 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALA---EQGYAVVAFDYPGHGDSDGA----DAVERVLADI-R--AGYPDPDRIILIGHSM 70 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHH---HTTEEEEEESCTTSTTSHHS----HHHHHHHHHH-H--HHHCTCCEEEEEEETH
T ss_pred CEEEECCCCCCHHHHHHHHHHHH---HCCCEEEEEecCCCCccchh----HHHHHHHHHH-H--hhcCCCCcEEEEEEcc
Confidence 58999999987766666777766 68999999999999988322 1344444443 1 2223668999999999
Q ss_pred cHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHHhhccchhH
Q 012188 263 GCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKNHRVW 342 (468)
Q Consensus 263 Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (468)
||.+++.++.++ .+++++|++++. + ..
T Consensus 71 Gg~~a~~~~~~~-~~v~~~v~~~~~--~--~~------------------------------------------------ 97 (145)
T PF12695_consen 71 GGAIAANLAARN-PRVKAVVLLSPY--P--DS------------------------------------------------ 97 (145)
T ss_dssp HHHHHHHHHHHS-TTESEEEEESES--S--GC------------------------------------------------
T ss_pred CcHHHHHHhhhc-cceeEEEEecCc--c--ch------------------------------------------------
Confidence 999999999998 689999999972 1 00
Q ss_pred HHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChhhHHHHHHh
Q 012188 343 EFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRK 422 (468)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~ 422 (468)
..+...++|+++++|++|..+|.+..+.+.+.
T Consensus 98 ------------------------------------------------~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~ 129 (145)
T PF12695_consen 98 ------------------------------------------------EDLAKIRIPVLFIHGENDPLVPPEQVRRLYEA 129 (145)
T ss_dssp ------------------------------------------------HHHTTTTSEEEEEEETT-SSSHHHHHHHHHHH
T ss_pred ------------------------------------------------hhhhccCCcEEEEEECCCCcCCHHHHHHHHHH
Confidence 00134578999999999999999999999998
Q ss_pred CC-CCeEEEecCCCcc
Q 012188 423 IP-RARVKVIEKKDHI 437 (468)
Q Consensus 423 ~p-~~~l~~i~~~gH~ 437 (468)
++ +.++++++|++|+
T Consensus 130 ~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 130 LPGPKELYIIPGAGHF 145 (145)
T ss_dssp HCSSEEEEEETTS-TT
T ss_pred cCCCcEEEEeCCCcCc
Confidence 87 5799999999995
|
... |
| >PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.3e-15 Score=134.90 Aligned_cols=107 Identities=28% Similarity=0.446 Sum_probs=95.8
Q ss_pred CeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCc-eEEEEEE
Q 012188 182 RDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVK-SFHIVAH 260 (468)
Q Consensus 182 p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~-~i~lvGh 260 (468)
.+||=+||-|++...+.++.+.|. +.|.|+|.+++||+|.++++.+..|+-.+-..-+ .++++.++++ ++.++||
T Consensus 36 gTVv~~hGsPGSH~DFkYi~~~l~---~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~-~~ll~~l~i~~~~i~~gH 111 (297)
T PF06342_consen 36 GTVVAFHGSPGSHNDFKYIRPPLD---EAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFV-NALLDELGIKGKLIFLGH 111 (297)
T ss_pred eeEEEecCCCCCccchhhhhhHHH---HcCeEEEEeCCCCCCCCCCCcccccChHHHHHHH-HHHHHHcCCCCceEEEEe
Confidence 479999999999998888888887 6899999999999999999988889999999888 7999999985 7889999
Q ss_pred cccHHHHHHHHHhCCCccceEEEecCCCCCCCCC
Q 012188 261 SLGCILALALAVKHPGSVKSLTLLAPPYYPVPKG 294 (468)
Q Consensus 261 S~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~ 294 (468)
|.||-.|+.+|..+| ..++++++|+......+
T Consensus 112 SrGcenal~la~~~~--~~g~~lin~~G~r~Hkg 143 (297)
T PF06342_consen 112 SRGCENALQLAVTHP--LHGLVLINPPGLRPHKG 143 (297)
T ss_pred ccchHHHHHHHhcCc--cceEEEecCCccccccC
Confidence 999999999999996 67999999988765444
|
|
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.67 E-value=9.9e-16 Score=160.59 Aligned_cols=209 Identities=13% Similarity=0.101 Sum_probs=132.5
Q ss_pred CeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCC---CCCCC--CC--CCCCCHHHHHHHHHHHHhcccC-C-
Q 012188 182 RDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGF---GRSPK--PT--DSLYTVREHLDMIEKSVIEPNK-V- 252 (468)
Q Consensus 182 p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~---G~S~~--~~--~~~~t~~~~~~di~~~l~~~l~-~- 252 (468)
|.||++||+|.+..-+ .+...+..++.+||.|+.+|+||. |+.-. .. -+....+|+.+.+ + .+...+ +
T Consensus 395 P~i~~~hGGP~~~~~~-~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~-~-~l~~~~~~d 471 (620)
T COG1506 395 PLIVYIHGGPSAQVGY-SFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAV-D-ALVKLPLVD 471 (620)
T ss_pred CEEEEeCCCCcccccc-ccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhccCCccHHHHHHHH-H-HHHhCCCcC
Confidence 7899999998643321 122222223369999999999974 33311 11 1345788888888 5 444443 2
Q ss_pred -ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHH
Q 012188 253 -KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTI 331 (468)
Q Consensus 253 -~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (468)
++++|.|||+||++++..+.+.| .+++.+...++....... .... ..+....
T Consensus 472 ~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~~----------~~~~------------~~~~~~~---- 524 (620)
T COG1506 472 PERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYF----------GEST------------EGLRFDP---- 524 (620)
T ss_pred hHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhhc----------cccc------------hhhcCCH----
Confidence 58999999999999999999988 788887777654331000 0000 0000000
Q ss_pred HHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCcc
Q 012188 332 CLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELI 411 (468)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~v 411 (468)
+ ....... . ... ............++++|+|+|||++|..|
T Consensus 525 -----------~---~~~~~~~----------~--~~~-------------~~~~~sp~~~~~~i~~P~LliHG~~D~~v 565 (620)
T COG1506 525 -----------E---ENGGGPP----------E--DRE-------------KYEDRSPIFYADNIKTPLLLIHGEEDDRV 565 (620)
T ss_pred -----------H---HhCCCcc----------c--ChH-------------HHHhcChhhhhcccCCCEEEEeecCCccC
Confidence 0 0000000 0 000 00001111223688999999999999999
Q ss_pred ChhhHHHHHHhCC----CCeEEEecCCCccccccCcHHHHHHHHHHHHhhcC
Q 012188 412 PVECSYNVQRKIP----RARVKVIEKKDHITIVVGRQKTFARELEEIWRSSS 459 (468)
Q Consensus 412 p~~~~~~l~~~~p----~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~ 459 (468)
|.+++..+.+.+. +++++++|+.+|.+...++...+.+.+.+|+++..
T Consensus 566 ~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~ 617 (620)
T COG1506 566 PIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKRHL 617 (620)
T ss_pred ChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHHh
Confidence 9999999888764 46999999999998875677888999999998753
|
|
| >KOG4667 consensus Predicted esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.67 E-value=6.6e-16 Score=132.42 Aligned_cols=220 Identities=18% Similarity=0.188 Sum_probs=133.7
Q ss_pred cCCCCeEEEEecCCCCcc--chhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCC-c-
Q 012188 178 SSSSRDTLFVKTQGPSAF--WTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKV-K- 253 (468)
Q Consensus 178 ~~~~p~vl~lHG~g~s~~--~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~-~- 253 (468)
.++...+|++||+-.+.. ....+...++ +.||.++.+|++|.|+|++.-. .-.....++|+ ..+++.+.. .
T Consensus 30 tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~e---~~gis~fRfDF~GnGeS~gsf~-~Gn~~~eadDL-~sV~q~~s~~nr 104 (269)
T KOG4667|consen 30 TGSTEIVVLCHGFRSHKNAIIMKNVAKALE---KEGISAFRFDFSGNGESEGSFY-YGNYNTEADDL-HSVIQYFSNSNR 104 (269)
T ss_pred cCCceEEEEeeccccccchHHHHHHHHHHH---hcCceEEEEEecCCCCcCCccc-cCcccchHHHH-HHHHHHhccCce
Confidence 456678999999877543 2233444444 6899999999999999987654 11233344777 577776543 2
Q ss_pred -eEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCC-chhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHH
Q 012188 254 -SFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKG-AQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTI 331 (468)
Q Consensus 254 -~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (468)
--+++|||-||-+++.+|.++++ ++-+|.+++-+.....- .......+.++....-|...
T Consensus 105 ~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I~eRlg~~~l~~ike~Gfid~~----------------- 166 (269)
T KOG4667|consen 105 VVPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGINERLGEDYLERIKEQGFIDVG----------------- 166 (269)
T ss_pred EEEEEEeecCccHHHHHHHHhhcC-chheEEcccccchhcchhhhhcccHHHHHHhCCceecC-----------------
Confidence 24689999999999999999997 77777777655431110 00000001111000000000
Q ss_pred HHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhh--ccCCCcEEEEeeCCCC
Q 012188 332 CLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVR--NHVKCDVNVFHGEDDE 409 (468)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~PvLii~G~~D~ 409 (468)
.+...+.. .++.......+ .....+.. -..+||||-+||..|.
T Consensus 167 ----~rkG~y~~----rvt~eSlmdrL---------------------------ntd~h~aclkId~~C~VLTvhGs~D~ 211 (269)
T KOG4667|consen 167 ----PRKGKYGY----RVTEESLMDRL---------------------------NTDIHEACLKIDKQCRVLTVHGSEDE 211 (269)
T ss_pred ----cccCCcCc----eecHHHHHHHH---------------------------hchhhhhhcCcCccCceEEEeccCCc
Confidence 00000000 00000000000 00000000 1348999999999999
Q ss_pred ccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 410 LIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 410 ~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
+||.+.+.++++.+|+-++.++||++|... ....+.......|.+.
T Consensus 212 IVPve~AkefAk~i~nH~L~iIEgADHnyt--~~q~~l~~lgl~f~k~ 257 (269)
T KOG4667|consen 212 IVPVEDAKEFAKIIPNHKLEIIEGADHNYT--GHQSQLVSLGLEFIKT 257 (269)
T ss_pred eeechhHHHHHHhccCCceEEecCCCcCcc--chhhhHhhhcceeEEe
Confidence 999999999999999999999999999876 4556666666666543
|
|
| >PRK11460 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.6e-15 Score=138.26 Aligned_cols=174 Identities=14% Similarity=0.163 Sum_probs=113.6
Q ss_pred CCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCC----------CCCCC---HHHHHHHHH--
Q 012188 179 SSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPT----------DSLYT---VREHLDMIE-- 243 (468)
Q Consensus 179 ~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~----------~~~~t---~~~~~~di~-- 243 (468)
+.+|.||++||+|++...+..+.+.|. +.++.+..++.+|...+.... ..... +.+.++.+.
T Consensus 14 ~~~~~vIlLHG~G~~~~~~~~l~~~l~---~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~ 90 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPVAMGEIGSWFA---PAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIET 90 (232)
T ss_pred CCCcEEEEEeCCCCChHHHHHHHHHHH---HHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHH
Confidence 346789999999998775556777776 234455555555543221110 00011 122222221
Q ss_pred -HHHhcccCC--ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhh
Q 012188 244 -KSVIEPNKV--KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASM 320 (468)
Q Consensus 244 -~~l~~~l~~--~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (468)
+.+.++.++ ++++++|||+||.+++.++.++|+.+.+++.+++.....+.
T Consensus 91 i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~~~~--------------------------- 143 (232)
T PRK11460 91 VRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYASLPE--------------------------- 143 (232)
T ss_pred HHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccccccc---------------------------
Confidence 233444444 58999999999999999999999888888877643210000
Q ss_pred HHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcE
Q 012188 321 ACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDV 400 (468)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pv 400 (468)
....+.|+
T Consensus 144 ------------------------------------------------------------------------~~~~~~pv 151 (232)
T PRK11460 144 ------------------------------------------------------------------------TAPTATTI 151 (232)
T ss_pred ------------------------------------------------------------------------cccCCCcE
Confidence 01126899
Q ss_pred EEEeeCCCCccChhhHHHHHHhCC----CCeEEEecCCCccccccCcHHHHHHHHHHHH
Q 012188 401 NVFHGEDDELIPVECSYNVQRKIP----RARVKVIEKKDHITIVVGRQKTFARELEEIW 455 (468)
Q Consensus 401 Lii~G~~D~~vp~~~~~~l~~~~p----~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl 455 (468)
+++||++|.++|.+.++++.+.+. ++++++++++||.+.. +.-+...+.+.+++
T Consensus 152 li~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~-~~~~~~~~~l~~~l 209 (232)
T PRK11460 152 HLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAIDP-RLMQFALDRLRYTV 209 (232)
T ss_pred EEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCH-HHHHHHHHHHHHHc
Confidence 999999999999999988887664 4688899999999764 45555555555555
|
|
| >KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.9e-16 Score=139.90 Aligned_cols=105 Identities=21% Similarity=0.273 Sum_probs=84.1
Q ss_pred CCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcc-cC--CceE
Q 012188 179 SSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEP-NK--VKSF 255 (468)
Q Consensus 179 ~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~-l~--~~~i 255 (468)
+.+|.++++||+|.+..-|..+...+.. +-..+|+++|+||||+|.-....+.+.+.++.|+ .++++. +| ..++
T Consensus 72 t~gpil~l~HG~G~S~LSfA~~a~el~s--~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~-~~~i~~~fge~~~~i 148 (343)
T KOG2564|consen 72 TEGPILLLLHGGGSSALSFAIFASELKS--KIRCRCLALDLRGHGETKVENEDDLSLETMSKDF-GAVIKELFGELPPQI 148 (343)
T ss_pred CCccEEEEeecCcccchhHHHHHHHHHh--hcceeEEEeeccccCccccCChhhcCHHHHHHHH-HHHHHHHhccCCCce
Confidence 3689999999999988766667766652 2357889999999999987776778999999999 577665 33 3589
Q ss_pred EEEEEcccHHHHHHHHHh--CCCccceEEEecCC
Q 012188 256 HIVAHSLGCILALALAVK--HPGSVKSLTLLAPP 287 (468)
Q Consensus 256 ~lvGhS~Gg~ial~~a~~--~p~~v~~lVl~~p~ 287 (468)
+||||||||.+|...|.. -|. +.++++++-+
T Consensus 149 ilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVV 181 (343)
T KOG2564|consen 149 ILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVV 181 (343)
T ss_pred EEEeccccchhhhhhhhhhhchh-hhceEEEEEe
Confidence 999999999999887754 465 8999998854
|
|
| >KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.5e-15 Score=130.32 Aligned_cols=207 Identities=14% Similarity=0.197 Sum_probs=136.4
Q ss_pred cCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcc--cCCceE
Q 012188 178 SSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEP--NKVKSF 255 (468)
Q Consensus 178 ~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~--l~~~~i 255 (468)
..+.|++|++|+..++-..+-++..-+- .+-+.+|+.+++||+|.|++.+.. ..+.-.++.+.+.+..+ +...++
T Consensus 75 E~S~pTlLyfh~NAGNmGhr~~i~~~fy--~~l~mnv~ivsYRGYG~S~GspsE-~GL~lDs~avldyl~t~~~~dktki 151 (300)
T KOG4391|consen 75 ESSRPTLLYFHANAGNMGHRLPIARVFY--VNLKMNVLIVSYRGYGKSEGSPSE-EGLKLDSEAVLDYLMTRPDLDKTKI 151 (300)
T ss_pred cCCCceEEEEccCCCcccchhhHHHHHH--HHcCceEEEEEeeccccCCCCccc-cceeccHHHHHHHHhcCccCCcceE
Confidence 4568999999998775443323332221 124789999999999999877641 22222233332455544 445689
Q ss_pred EEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHHh
Q 012188 256 HIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLI 335 (468)
Q Consensus 256 ~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (468)
++.|.|+||.+|+.+|+++.+++.++|+-+......... ...+.+ +
T Consensus 152 vlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~-------i~~v~p--------~------------------- 197 (300)
T KOG4391|consen 152 VLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMA-------IPLVFP--------F------------------- 197 (300)
T ss_pred EEEecccCCeeEEEeeccchhheeeeeeechhccchhhh-------hheecc--------c-------------------
Confidence 999999999999999999999999999988654320000 000000 0
Q ss_pred hccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChhh
Q 012188 336 CKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVEC 415 (468)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~ 415 (468)
..+.+..++..+ .|... ....+-+.|.|++.|..|.+||+.+
T Consensus 198 -----~~k~i~~lc~kn-----------------~~~S~----------------~ki~~~~~P~LFiSGlkDelVPP~~ 239 (300)
T KOG4391|consen 198 -----PMKYIPLLCYKN-----------------KWLSY----------------RKIGQCRMPFLFISGLKDELVPPVM 239 (300)
T ss_pred -----hhhHHHHHHHHh-----------------hhcch----------------hhhccccCceEEeecCccccCCcHH
Confidence 000000111110 11100 0112447899999999999999999
Q ss_pred HHHHHHhCCC--CeEEEecCCCccccccCcHHHHHHHHHHHHhhcCCC
Q 012188 416 SYNVQRKIPR--ARVKVIEKKDHITIVVGRQKTFARELEEIWRSSSGH 461 (468)
Q Consensus 416 ~~~l~~~~p~--~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~~~ 461 (468)
.+.+++..|. .++.++|++.|...+ .-+.+.+.|.+||.+....
T Consensus 240 Mr~Ly~~c~S~~Krl~eFP~gtHNDT~--i~dGYfq~i~dFlaE~~~~ 285 (300)
T KOG4391|consen 240 MRQLYELCPSRTKRLAEFPDGTHNDTW--ICDGYFQAIEDFLAEVVKS 285 (300)
T ss_pred HHHHHHhCchhhhhheeCCCCccCceE--EeccHHHHHHHHHHHhccC
Confidence 9999999974 589999999998775 4578899999999886554
|
|
| >PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.1e-15 Score=137.49 Aligned_cols=182 Identities=16% Similarity=0.150 Sum_probs=115.3
Q ss_pred CCcceEEEECCCCCCCCC------CCC-CCCCCHHHHHHHHHHHHhcccC--CceEEEEEEcccHHHHHHHHHhCCCccc
Q 012188 209 KSTYRLFAIDLLGFGRSP------KPT-DSLYTVREHLDMIEKSVIEPNK--VKSFHIVAHSLGCILALALAVKHPGSVK 279 (468)
Q Consensus 209 ~~gy~Via~D~~G~G~S~------~~~-~~~~t~~~~~~di~~~l~~~l~--~~~i~lvGhS~Gg~ial~~a~~~p~~v~ 279 (468)
++||.|+.+|+||.+... ... .....++|.++.+ +.++++.. .+++.++|||+||++++.++.++|++++
T Consensus 12 ~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i-~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~~~~f~ 90 (213)
T PF00326_consen 12 SQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAI-EYLIKQYYIDPDRIGIMGHSYGGYLALLAATQHPDRFK 90 (213)
T ss_dssp TTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHH-HHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHTCCGSS
T ss_pred hCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHH-HHHhccccccceeEEEEcccccccccchhhcccceeee
Confidence 599999999999977431 111 1223566666666 46666543 4689999999999999999999999999
Q ss_pred eEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHH-HHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHh
Q 012188 280 SLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMAC-WYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFL 358 (468)
Q Consensus 280 ~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (468)
++|..+|............ .... ++.... .... ....
T Consensus 91 a~v~~~g~~d~~~~~~~~~--------------------~~~~~~~~~~~--------~~~~---------~~~~----- 128 (213)
T PF00326_consen 91 AAVAGAGVSDLFSYYGTTD--------------------IYTKAEYLEYG--------DPWD---------NPEF----- 128 (213)
T ss_dssp EEEEESE-SSTTCSBHHTC--------------------CHHHGHHHHHS--------STTT---------SHHH-----
T ss_pred eeeccceecchhccccccc--------------------ccccccccccC--------ccch---------hhhh-----
Confidence 9999998765422210000 0000 000000 0000 0000
Q ss_pred hhccccccchhHHhhHhHHHhcccccccchHHHhhcc--CCCcEEEEeeCCCCccChhhHHHHHHhCC----CCeEEEec
Q 012188 359 LEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNH--VKCDVNVFHGEDDELIPVECSYNVQRKIP----RARVKVIE 432 (468)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~PvLii~G~~D~~vp~~~~~~l~~~~p----~~~l~~i~ 432 (468)
+.... ......+ +++|+|++||++|..||++.+..+.+.+. +++++++|
T Consensus 129 ------------~~~~s-------------~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p 183 (213)
T PF00326_consen 129 ------------YRELS-------------PISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFP 183 (213)
T ss_dssp ------------HHHHH-------------HGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEET
T ss_pred ------------hhhhc-------------cccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcC
Confidence 00000 0000123 68999999999999999999988877663 47999999
Q ss_pred CCCccccccCcHHHHHHHHHHHHhhc
Q 012188 433 KKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 433 ~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
++||.....+....+.+.+.+|+++.
T Consensus 184 ~~gH~~~~~~~~~~~~~~~~~f~~~~ 209 (213)
T PF00326_consen 184 GEGHGFGNPENRRDWYERILDFFDKY 209 (213)
T ss_dssp T-SSSTTSHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCchhHHHHHHHHHHHHHHH
Confidence 99997665466778899999999874
|
; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B .... |
| >KOG1838 consensus Alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.63 E-value=3.7e-14 Score=135.66 Aligned_cols=255 Identities=11% Similarity=0.158 Sum_probs=137.8
Q ss_pred CCCCeEEEEecCCCCccc--hhhhhhhccccCCCcceEEEECCCCCCCCCCCCC---CCCCHHHHHHHHHHHHhcccCCc
Q 012188 179 SSSRDTLFVKTQGPSAFW--TETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD---SLYTVREHLDMIEKSVIEPNKVK 253 (468)
Q Consensus 179 ~~~p~vl~lHG~g~s~~~--~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~---~~~t~~~~~~di~~~l~~~l~~~ 253 (468)
+..|.||++||..+++.- -..+...+ .++||+|++++.||+|.|+-... .....+|+.+.+ ..+.+++...
T Consensus 123 ~~~P~vvilpGltg~S~~~YVr~lv~~a---~~~G~r~VVfN~RG~~g~~LtTpr~f~ag~t~Dl~~~v-~~i~~~~P~a 198 (409)
T KOG1838|consen 123 GTDPIVVILPGLTGGSHESYVRHLVHEA---QRKGYRVVVFNHRGLGGSKLTTPRLFTAGWTEDLREVV-NHIKKRYPQA 198 (409)
T ss_pred CCCcEEEEecCCCCCChhHHHHHHHHHH---HhCCcEEEEECCCCCCCCccCCCceeecCCHHHHHHHH-HHHHHhCCCC
Confidence 456999999997665442 22232222 35899999999999999965444 334567777777 6888888888
Q ss_pred eEEEEEEcccHHHHHHHHHhCCC--ccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHH
Q 012188 254 SFHIVAHSLGCILALALAVKHPG--SVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTI 331 (468)
Q Consensus 254 ~i~lvGhS~Gg~ial~~a~~~p~--~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (468)
+++.+|.||||.+.+.|..+-.+ .+.+.+.++.|+... ...........+. .+...+..-.......-
T Consensus 199 ~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~-----~~~~~~~~~~~~~-----~y~~~l~~~l~~~~~~~ 268 (409)
T KOG1838|consen 199 PLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLL-----AASRSIETPLYRR-----FYNRALTLNLKRIVLRH 268 (409)
T ss_pred ceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhh-----hhhhHHhcccchH-----HHHHHHHHhHHHHHhhh
Confidence 99999999999999999887554 244555555444321 0001100000000 00000000000000000
Q ss_pred HHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCcc
Q 012188 332 CLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELI 411 (468)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~v 411 (468)
...+......++...+.-+-..+.+......+.. .....++. .......+.+|++|+|+|+..+|+++
T Consensus 269 r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf------~~~deYY~------~aSs~~~v~~I~VP~L~ina~DDPv~ 336 (409)
T KOG1838|consen 269 RHTLFEDPVDFDVILKSRSVREFDEALTRPMFGF------KSVDEYYK------KASSSNYVDKIKVPLLCINAADDPVV 336 (409)
T ss_pred hhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCC------CcHHHHHh------hcchhhhcccccccEEEEecCCCCCC
Confidence 0000011111111111100001111110000000 00000110 11223345789999999999999999
Q ss_pred Chhh-HHHHHHhCCCCeEEEecCCCccccccC---cHHHHHHH-HHHHHhhcC
Q 012188 412 PVEC-SYNVQRKIPRARVKVIEKKDHITIVVG---RQKTFARE-LEEIWRSSS 459 (468)
Q Consensus 412 p~~~-~~~l~~~~p~~~l~~i~~~gH~~~~~e---~p~~~~~~-i~~fl~~~~ 459 (468)
|.+. -.......|++-+.+...+||..+++. .+..+.+. +.+|+....
T Consensus 337 p~~~ip~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~~ 389 (409)
T KOG1838|consen 337 PEEAIPIDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNAI 389 (409)
T ss_pred CcccCCHHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHHH
Confidence 9854 344455568888888888999999844 45556655 778876643
|
|
| >TIGR02821 fghA_ester_D S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.60 E-value=6.3e-14 Score=132.80 Aligned_cols=106 Identities=19% Similarity=0.162 Sum_probs=72.6
Q ss_pred CCeEEEEecCCCCccchhh--hhhhccccCCCcceEEEECC--CCCCCCCCC-------------------CCCCCCHHH
Q 012188 181 SRDTLFVKTQGPSAFWTET--LFPNFSSASKSTYRLFAIDL--LGFGRSPKP-------------------TDSLYTVRE 237 (468)
Q Consensus 181 ~p~vl~lHG~g~s~~~~~~--~~~~L~~~~~~gy~Via~D~--~G~G~S~~~-------------------~~~~~t~~~ 237 (468)
.|+|+++||++++...+.. .+..+. .+.||.|++||. +|+|.+... ....++..+
T Consensus 42 ~P~vvllHG~~~~~~~~~~~~~~~~la--~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~ 119 (275)
T TIGR02821 42 VPVLWYLSGLTCTHENFMIKAGAQRFA--AEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYS 119 (275)
T ss_pred CCEEEEccCCCCCccHHHhhhHHHHHH--hhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHH
Confidence 5899999999876543221 122332 135899999998 555543210 001233344
Q ss_pred H-HHHHHHHHhcc---cCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCC
Q 012188 238 H-LDMIEKSVIEP---NKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYY 289 (468)
Q Consensus 238 ~-~~di~~~l~~~---l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~ 289 (468)
+ ++++ ..+++. ++.++++++||||||++++.++.++|+.++++++++|...
T Consensus 120 ~~~~~l-~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 174 (275)
T TIGR02821 120 YIVQEL-PALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVA 174 (275)
T ss_pred HHHHHH-HHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccC
Confidence 3 4666 455554 4557899999999999999999999999999999998754
|
This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. |
| >TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.60 E-value=7.8e-15 Score=136.49 Aligned_cols=106 Identities=15% Similarity=0.130 Sum_probs=82.0
Q ss_pred CCeEEEEecCCCCccc----hhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH--HHhcccCCce
Q 012188 181 SRDTLFVKTQGPSAFW----TETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEK--SVIEPNKVKS 254 (468)
Q Consensus 181 ~p~vl~lHG~g~s~~~----~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~--~l~~~l~~~~ 254 (468)
+|+|||+||++..... +..+.+.|+ ++||+|+++|+||||.|++... ..++.++++|+.. .++++.+.++
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La---~~Gy~Vl~~Dl~G~G~S~g~~~-~~~~~~~~~Dv~~ai~~L~~~~~~~ 100 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFA---AGGFGVLQIDLYGCGDSAGDFA-AARWDVWKEDVAAAYRWLIEQGHPP 100 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHH---HCCCEEEEECCCCCCCCCCccc-cCCHHHHHHHHHHHHHHHHhcCCCC
Confidence 4689999998864332 223445554 5799999999999999976543 3577777777631 2345557789
Q ss_pred EEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCC
Q 012188 255 FHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 255 i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~ 290 (468)
++++||||||.+++.+|.++|+.++++|+++|....
T Consensus 101 v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g 136 (266)
T TIGR03101 101 VTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSG 136 (266)
T ss_pred EEEEEECHHHHHHHHHHHhCccccceEEEeccccch
Confidence 999999999999999999999999999999987543
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily. |
| >COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.3e-13 Score=127.17 Aligned_cols=253 Identities=10% Similarity=0.106 Sum_probs=132.0
Q ss_pred CCCCeEEEEecCCCCcc--chhhhhhhccccCCCcceEEEECCCCCCCCCCCCC---CCCCHHHHHHHHHHHHhcccCCc
Q 012188 179 SSSRDTLFVKTQGPSAF--WTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD---SLYTVREHLDMIEKSVIEPNKVK 253 (468)
Q Consensus 179 ~~~p~vl~lHG~g~s~~--~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~---~~~t~~~~~~di~~~l~~~l~~~ 253 (468)
..+|.||++||..++.. +-..+...+. ++||.|++++.|||+.+..... .....+|.+.-+ +.+.......
T Consensus 73 ~~~P~vVl~HGL~G~s~s~y~r~L~~~~~---~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~t~D~~~~l-~~l~~~~~~r 148 (345)
T COG0429 73 AKKPLVVLFHGLEGSSNSPYARGLMRALS---RRGWLVVVFHFRGCSGEANTSPRLYHSGETEDIRFFL-DWLKARFPPR 148 (345)
T ss_pred cCCceEEEEeccCCCCcCHHHHHHHHHHH---hcCCeEEEEecccccCCcccCcceecccchhHHHHHH-HHHHHhCCCC
Confidence 34689999999765433 4444555555 6999999999999999864332 222335555555 4555567778
Q ss_pred eEEEEEEcccH-HHHHHHHHhCCC-ccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHH-HHHHHhhH
Q 012188 254 SFHIVAHSLGC-ILALALAVKHPG-SVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMAC-WYEHISRT 330 (468)
Q Consensus 254 ~i~lvGhS~Gg-~ial~~a~~~p~-~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 330 (468)
++..+|.|+|| +++..++.+-.+ .+.+.+.++.|.... .....+.. .+....+...+.. ......+.
T Consensus 149 ~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~--------~~~~~l~~--~~s~~ly~r~l~~~L~~~~~~k 218 (345)
T COG0429 149 PLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLE--------ACAYRLDS--GFSLRLYSRYLLRNLKRNAARK 218 (345)
T ss_pred ceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHH--------HHHHHhcC--chhhhhhHHHHHHHHHHHHHHH
Confidence 99999999999 666666554322 356666666554320 00000000 0000000001110 01111111
Q ss_pred HHHHhhccchh-HHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCC
Q 012188 331 ICLLICKNHRV-WEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDE 409 (468)
Q Consensus 331 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~ 409 (468)
+.......+.. .+.+.+.-+-..+...+..... .+.....++. ......++.+|.+|+||||..+|+
T Consensus 219 l~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~------Gf~da~dYYr------~aSs~~~L~~Ir~PtLii~A~DDP 286 (345)
T COG0429 219 LKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLH------GFADAEDYYR------QASSLPLLPKIRKPTLIINAKDDP 286 (345)
T ss_pred HHhcCcccCcHHHHHHHhhchHHhccceeeeccc------CCCcHHHHHH------hccccccccccccceEEEecCCCC
Confidence 11110000000 0111110000000000000000 0000011110 111233568999999999999999
Q ss_pred ccChhhHHHHHH-hCCCCeEEEecCCCcccccc---CcHH-HHHHHHHHHHhh
Q 012188 410 LIPVECSYNVQR-KIPRARVKVIEKKDHITIVV---GRQK-TFARELEEIWRS 457 (468)
Q Consensus 410 ~vp~~~~~~l~~-~~p~~~l~~i~~~gH~~~~~---e~p~-~~~~~i~~fl~~ 457 (468)
+++++....... ..|++.+.+.+.+||..++. .+|. -..+.+.+|++.
T Consensus 287 ~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~ 339 (345)
T COG0429 287 FMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDP 339 (345)
T ss_pred CCChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHH
Confidence 999877666665 66899999999999998873 1343 335567777764
|
|
| >PLN02442 S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.1e-13 Score=131.46 Aligned_cols=106 Identities=18% Similarity=0.165 Sum_probs=71.3
Q ss_pred CCCeEEEEecCCCCcc-chh--hhhhhccccCCCcceEEEECCCCCCC-----CCC-------------CCC-----C--
Q 012188 180 SSRDTLFVKTQGPSAF-WTE--TLFPNFSSASKSTYRLFAIDLLGFGR-----SPK-------------PTD-----S-- 231 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~-~~~--~~~~~L~~~~~~gy~Via~D~~G~G~-----S~~-------------~~~-----~-- 231 (468)
+.|+|+|+||++++.. |.. .+...+. ..||.|+.+|..++|. +.. ... .
T Consensus 46 ~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~---~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (283)
T PLN02442 46 KVPVLYWLSGLTCTDENFIQKSGAQRAAA---ARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMY 122 (283)
T ss_pred CCCEEEEecCCCcChHHHHHhhhHHHHHh---hcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchh
Confidence 4589999999887653 221 1122222 4699999999887761 110 000 0
Q ss_pred CCCHHHHHHHHHHHHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCC
Q 012188 232 LYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYY 289 (468)
Q Consensus 232 ~~t~~~~~~di~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~ 289 (468)
.+-.+++.+.+ ....+.++.++++++||||||+.|+.++.++|+++++++++++...
T Consensus 123 ~~~~~~l~~~i-~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 179 (283)
T PLN02442 123 DYVVKELPKLL-SDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIAN 179 (283)
T ss_pred hhHHHHHHHHH-HHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccC
Confidence 11123333334 3444456778999999999999999999999999999999998754
|
|
| >PLN00021 chlorophyllase | Back alignment and domain information |
|---|
Probab=99.58 E-value=6.1e-14 Score=134.09 Aligned_cols=102 Identities=16% Similarity=0.172 Sum_probs=74.4
Q ss_pred CCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhc----------
Q 012188 179 SSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIE---------- 248 (468)
Q Consensus 179 ~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~---------- 248 (468)
+..|+|||+||++....++..+.+.|+ +.||.|+++|++|++.+.. ...+++..+.+ ..+.+
T Consensus 50 g~~PvVv~lHG~~~~~~~y~~l~~~La---s~G~~VvapD~~g~~~~~~----~~~i~d~~~~~-~~l~~~l~~~l~~~~ 121 (313)
T PLN00021 50 GTYPVLLFLHGYLLYNSFYSQLLQHIA---SHGFIVVAPQLYTLAGPDG----TDEIKDAAAVI-NWLSSGLAAVLPEGV 121 (313)
T ss_pred CCCCEEEEECCCCCCcccHHHHHHHHH---hCCCEEEEecCCCcCCCCc----hhhHHHHHHHH-HHHHhhhhhhccccc
Confidence 345899999999988888877888887 5799999999999754321 12233322222 22221
Q ss_pred ccCCceEEEEEEcccHHHHHHHHHhCCC-----ccceEEEecCCC
Q 012188 249 PNKVKSFHIVAHSLGCILALALAVKHPG-----SVKSLTLLAPPY 288 (468)
Q Consensus 249 ~l~~~~i~lvGhS~Gg~ial~~a~~~p~-----~v~~lVl~~p~~ 288 (468)
..+.++++++||||||.+++.+|.++++ +++++|+++|..
T Consensus 122 ~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 122 RPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred ccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 1344789999999999999999999874 689999998864
|
|
| >COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.6e-13 Score=120.43 Aligned_cols=220 Identities=16% Similarity=0.178 Sum_probs=135.5
Q ss_pred CCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceEEEEEE
Q 012188 181 SRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAH 260 (468)
Q Consensus 181 ~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i~lvGh 260 (468)
++.++++|=.|+++..+..+...|. ....++++++||+|.--..+ -..+++++++.+..++......+++.++||
T Consensus 7 ~~~L~cfP~AGGsa~~fr~W~~~lp----~~iel~avqlPGR~~r~~ep-~~~di~~Lad~la~el~~~~~d~P~alfGH 81 (244)
T COG3208 7 RLRLFCFPHAGGSASLFRSWSRRLP----ADIELLAVQLPGRGDRFGEP-LLTDIESLADELANELLPPLLDAPFALFGH 81 (244)
T ss_pred CceEEEecCCCCCHHHHHHHHhhCC----chhheeeecCCCcccccCCc-ccccHHHHHHHHHHHhccccCCCCeeeccc
Confidence 4567777766666555555666666 67999999999999874333 246899999999534432344479999999
Q ss_pred cccHHHHHHHHHhCC---CccceEEEecCCCCCCCCC----chhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHH
Q 012188 261 SLGCILALALAVKHP---GSVKSLTLLAPPYYPVPKG----AQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICL 333 (468)
Q Consensus 261 S~Gg~ial~~a~~~p---~~v~~lVl~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (468)
||||++|.++|.+.. ....++.+.+......... ...-..++..+......++..
T Consensus 82 SmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~------------------ 143 (244)
T COG3208 82 SMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPEL------------------ 143 (244)
T ss_pred chhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChHH------------------
Confidence 999999999998753 2366777776433211110 000111111111111111000
Q ss_pred HhhccchhHHHHHHHHhhhHHHHH-hhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccC
Q 012188 334 LICKNHRVWEFLAKLVTRNRIRTF-LLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIP 412 (468)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp 412 (468)
..+ ..+..++..---.++ +.+. |...--..++||+.++.|++|..+.
T Consensus 144 --led----~El~~l~LPilRAD~~~~e~--------------------------Y~~~~~~pl~~pi~~~~G~~D~~vs 191 (244)
T COG3208 144 --LED----PELMALFLPILRADFRALES--------------------------YRYPPPAPLACPIHAFGGEKDHEVS 191 (244)
T ss_pred --hcC----HHHHHHHHHHHHHHHHHhcc--------------------------cccCCCCCcCcceEEeccCcchhcc
Confidence 000 001111111000000 1111 1111114679999999999999999
Q ss_pred hhhHHHHHHhCC-CCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 413 VECSYNVQRKIP-RARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 413 ~~~~~~l~~~~p-~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
.+....+.+... ..++.+++| ||+.+. ++.+++.+.|.+.+..
T Consensus 192 ~~~~~~W~~~t~~~f~l~~fdG-gHFfl~-~~~~~v~~~i~~~l~~ 235 (244)
T COG3208 192 RDELGAWREHTKGDFTLRVFDG-GHFFLN-QQREEVLARLEQHLAH 235 (244)
T ss_pred HHHHHHHHHhhcCCceEEEecC-cceehh-hhHHHHHHHHHHHhhh
Confidence 999998988886 569999996 999997 8999999999998853
|
|
| >PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3 | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.2e-13 Score=124.86 Aligned_cols=251 Identities=12% Similarity=0.130 Sum_probs=135.5
Q ss_pred ceeEEEec---CCCCeEEEEecCCCCccc-hhhh-----hhhccccCCCcceEEEECCCCCCCC--CCCCC-CCCCHHHH
Q 012188 171 CKFCTCWS---SSSRDTLFVKTQGPSAFW-TETL-----FPNFSSASKSTYRLFAIDLLGFGRS--PKPTD-SLYTVREH 238 (468)
Q Consensus 171 ~~~~~~~~---~~~p~vl~lHG~g~s~~~-~~~~-----~~~L~~~~~~gy~Via~D~~G~G~S--~~~~~-~~~t~~~~ 238 (468)
.++++.++ +++|++|=.|-.|.+..- +..+ +..+. ++|.++-+|.||+..- +-+.+ ...+++++
T Consensus 10 ~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~----~~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~L 85 (283)
T PF03096_consen 10 SVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEIL----QNFCIYHIDAPGQEEGAATLPEGYQYPSMDQL 85 (283)
T ss_dssp EEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHH----TTSEEEEEE-TTTSTT-----TT-----HHHH
T ss_pred EEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHh----hceEEEEEeCCCCCCCcccccccccccCHHHH
Confidence 35555553 247899999998874321 2122 22333 7999999999998664 33333 34589999
Q ss_pred HHHHHHHHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcC----CCCCchh
Q 012188 239 LDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAP----RRVWPLI 314 (468)
Q Consensus 239 ~~di~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 314 (468)
++++ ..++++++++.++-+|--.|++|-.++|.+||++|.++||+++......+ .+|...++.. ...|...
T Consensus 86 Ae~l-~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw----~Ew~~~K~~~~~L~~~gmt~~ 160 (283)
T PF03096_consen 86 AEML-PEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGW----MEWFYQKLSSWLLYSYGMTSS 160 (283)
T ss_dssp HCTH-HHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---H----HHHHHHHHH-------CTTS-
T ss_pred HHHH-HHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccH----HHHHHHHHhcccccccccccc
Confidence 9999 79999999999999999999999999999999999999999987654333 3333333332 2222221
Q ss_pred hhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccc-hhHHhhHhHHHhcccccccchHHHhh
Q 012188 315 AFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTH-NAAWHTLHNIICGTANKLDGYLDAVR 393 (468)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (468)
.....+.. .+.+.. ...+.+......+.+ ..... .+....+..+... .++...+
T Consensus 161 ~~d~Ll~h---~Fg~~~---~~~n~Dlv~~yr~~l-------------~~~~Np~Nl~~f~~sy~~R------~DL~~~~ 215 (283)
T PF03096_consen 161 VKDYLLWH---YFGKEE---EENNSDLVQTYRQHL-------------DERINPKNLALFLNSYNSR------TDLSIER 215 (283)
T ss_dssp HHHHHHHH---HS-HHH---HHCT-HHHHHHHHHH-------------HT-TTHHHHHHHHHHHHT-----------SEC
T ss_pred hHHhhhhc---cccccc---ccccHHHHHHHHHHH-------------hcCCCHHHHHHHHHHHhcc------ccchhhc
Confidence 11111111 111100 001111111111111 11111 1111222222111 2222233
Q ss_pred ccCCCcEEEEeeCCCCccChhhHHHHHHhC-C-CCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 394 NHVKCDVNVFHGEDDELIPVECSYNVQRKI-P-RARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 394 ~~i~~PvLii~G~~D~~vp~~~~~~l~~~~-p-~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
+...||+|++.|+..+.+ +.+.++..++ | +.++..++++|=.+.. |+|..+++.++-|++.-
T Consensus 216 ~~~~c~vLlvvG~~Sp~~--~~vv~~ns~Ldp~~ttllkv~dcGglV~e-EqP~klaea~~lFlQG~ 279 (283)
T PF03096_consen 216 PSLGCPVLLVVGDNSPHV--DDVVEMNSKLDPTKTTLLKVADCGGLVLE-EQPGKLAEAFKLFLQGM 279 (283)
T ss_dssp TTCCS-EEEEEETTSTTH--HHHHHHHHHS-CCCEEEEEETT-TT-HHH-H-HHHHHHHHHHHHHHT
T ss_pred CCCCCCeEEEEecCCcch--hhHHHHHhhcCcccceEEEecccCCcccc-cCcHHHHHHHHHHHccC
Confidence 566799999999998875 4567787777 3 5689999999999985 99999999999999753
|
Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A. |
| >COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.50 E-value=5.1e-13 Score=113.28 Aligned_cols=173 Identities=15% Similarity=0.224 Sum_probs=125.1
Q ss_pred CCCCeEEEEecCCC--Cccch---hhhhhhccccCCCcceEEEECCCCCCCCCCCCC-CCCCHHHHHHHHHHHHhcccCC
Q 012188 179 SSSRDTLFVKTQGP--SAFWT---ETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD-SLYTVREHLDMIEKSVIEPNKV 252 (468)
Q Consensus 179 ~~~p~vl~lHG~g~--s~~~~---~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~-~~~t~~~~~~di~~~l~~~l~~ 252 (468)
+..|..|.+|-.+. ..... ..+...|. +.||.++.+|+||.|+|.+.-+ +.-..+|....+ +.+..+...
T Consensus 26 ~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~---~~G~atlRfNfRgVG~S~G~fD~GiGE~~Da~aal-dW~~~~hp~ 101 (210)
T COG2945 26 PAAPIALICHPHPLFGGTMNNKVVQTLARALV---KRGFATLRFNFRGVGRSQGEFDNGIGELEDAAAAL-DWLQARHPD 101 (210)
T ss_pred CCCceEEecCCCccccCccCCHHHHHHHHHHH---hCCceEEeecccccccccCcccCCcchHHHHHHHH-HHHHhhCCC
Confidence 45677888887543 22222 22344444 6899999999999999988876 334566666666 566666554
Q ss_pred ce-EEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHH
Q 012188 253 KS-FHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTI 331 (468)
Q Consensus 253 ~~-i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (468)
.+ ..+.|+|+|+++++.+|.+.|+ ...++.+.|+... .
T Consensus 102 s~~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~~---~------------------------------------- 140 (210)
T COG2945 102 SASCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPINA---Y------------------------------------- 140 (210)
T ss_pred chhhhhcccchHHHHHHHHHHhccc-ccceeeccCCCCc---h-------------------------------------
Confidence 44 4688999999999999999886 4455554444321 0
Q ss_pred HHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCcc
Q 012188 332 CLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELI 411 (468)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~v 411 (468)
-...+....+|.++|+|+.|.++
T Consensus 141 ---------------------------------------------------------dfs~l~P~P~~~lvi~g~~Ddvv 163 (210)
T COG2945 141 ---------------------------------------------------------DFSFLAPCPSPGLVIQGDADDVV 163 (210)
T ss_pred ---------------------------------------------------------hhhhccCCCCCceeEecChhhhh
Confidence 00001334789999999999999
Q ss_pred ChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHh
Q 012188 412 PVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWR 456 (468)
Q Consensus 412 p~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~ 456 (468)
+++...++++. ...+++++++++|+.+ .+-..+.+.+.+||.
T Consensus 164 ~l~~~l~~~~~-~~~~~i~i~~a~HFF~--gKl~~l~~~i~~~l~ 205 (210)
T COG2945 164 DLVAVLKWQES-IKITVITIPGADHFFH--GKLIELRDTIADFLE 205 (210)
T ss_pred cHHHHHHhhcC-CCCceEEecCCCceec--ccHHHHHHHHHHHhh
Confidence 99988888777 4668899999999987 688999999999995
|
|
| >TIGR01840 esterase_phb esterase, PHB depolymerase family | Back alignment and domain information |
|---|
Probab=99.48 E-value=6.9e-13 Score=120.70 Aligned_cols=107 Identities=14% Similarity=0.037 Sum_probs=72.1
Q ss_pred CCCCeEEEEecCCCCccchh---hhhhhccccCCCcceEEEECCCCCCCCCCCC---------CCCCCHHHHHHHHHHHH
Q 012188 179 SSSRDTLFVKTQGPSAFWTE---TLFPNFSSASKSTYRLFAIDLLGFGRSPKPT---------DSLYTVREHLDMIEKSV 246 (468)
Q Consensus 179 ~~~p~vl~lHG~g~s~~~~~---~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~---------~~~~t~~~~~~di~~~l 246 (468)
+..|.||++||++++..-+. .+...+. +.||.|+++|++|+|.+.... .......++.+.+ ..+
T Consensus 11 ~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~---~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~ 86 (212)
T TIGR01840 11 GPRALVLALHGCGQTASAYVIDWGWKAAAD---RYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLI-DAV 86 (212)
T ss_pred CCCCEEEEeCCCCCCHHHHhhhcChHHHHH---hCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHH-HHH
Confidence 34689999999887543221 1222222 369999999999987543210 0111223333333 455
Q ss_pred hcccCC--ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCC
Q 012188 247 IEPNKV--KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYY 289 (468)
Q Consensus 247 ~~~l~~--~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~ 289 (468)
.+++++ ++++|+|||+||.+++.++.++|+.+.+++.++++..
T Consensus 87 ~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~ 131 (212)
T TIGR01840 87 KANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPY 131 (212)
T ss_pred HHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcc
Confidence 555544 5899999999999999999999999999998887653
|
This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. |
| >PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic | Back alignment and domain information |
|---|
Probab=99.45 E-value=7e-13 Score=115.27 Aligned_cols=153 Identities=24% Similarity=0.351 Sum_probs=101.0
Q ss_pred EEEEecCCCC--ccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceEEEEEEc
Q 012188 184 TLFVKTQGPS--AFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHS 261 (468)
Q Consensus 184 vl~lHG~g~s--~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i~lvGhS 261 (468)
|+++||++++ ..|+..+...+. ..++|-.+|+ + ..+.+++++.+ +.-+.... +++++||||
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~----~~~~V~~~~~------~-----~P~~~~W~~~l-~~~i~~~~-~~~ilVaHS 63 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLE----NSVRVEQPDW------D-----NPDLDEWVQAL-DQAIDAID-EPTILVAHS 63 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHT----TSEEEEEC--------T-----S--HHHHHHHH-HHCCHC-T-TTEEEEEET
T ss_pred CEEeCCCCCCCccHHHHHHHHhCC----CCeEEecccc------C-----CCCHHHHHHHH-HHHHhhcC-CCeEEEEeC
Confidence 6899998775 447766666666 4488888777 1 23788888888 45555554 569999999
Q ss_pred ccHHHHHHHH-HhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHHhhccch
Q 012188 262 LGCILALALA-VKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKNHR 340 (468)
Q Consensus 262 ~Gg~ial~~a-~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (468)
+||..++.++ ...+.+|++++|++|+....... . ..
T Consensus 64 LGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~~------------~----~~--------------------------- 100 (171)
T PF06821_consen 64 LGCLTALRWLAEQSQKKVAGALLVAPFDPDDPEP------------F----PP--------------------------- 100 (171)
T ss_dssp HHHHHHHHHHHHTCCSSEEEEEEES--SCGCHHC------------C----TC---------------------------
T ss_pred HHHHHHHHHHhhcccccccEEEEEcCCCcccccc------------h----hh---------------------------
Confidence 9999999999 77888999999999875310000 0 00
Q ss_pred hHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChhhHHHHH
Q 012188 341 VWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQ 420 (468)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~ 420 (468)
. ...+ .... ...+.+|.++|.+++|+++|.+.+++++
T Consensus 101 ------------~-----~~~f--------------------~~~p------~~~l~~~~~viaS~nDp~vp~~~a~~~A 137 (171)
T PF06821_consen 101 ------------E-----LDGF--------------------TPLP------RDPLPFPSIVIASDNDPYVPFERAQRLA 137 (171)
T ss_dssp ------------G-----GCCC--------------------TTSH------CCHHHCCEEEEEETTBSSS-HHHHHHHH
T ss_pred ------------h-----cccc--------------------ccCc------ccccCCCeEEEEcCCCCccCHHHHHHHH
Confidence 0 0000 0000 0223577799999999999999999999
Q ss_pred HhCCCCeEEEecCCCccccc
Q 012188 421 RKIPRARVKVIEKKDHITIV 440 (468)
Q Consensus 421 ~~~p~~~l~~i~~~gH~~~~ 440 (468)
+.+ +++++.++++||+..-
T Consensus 138 ~~l-~a~~~~~~~~GHf~~~ 156 (171)
T PF06821_consen 138 QRL-GAELIILGGGGHFNAA 156 (171)
T ss_dssp HHH-T-EEEEETS-TTSSGG
T ss_pred HHc-CCCeEECCCCCCcccc
Confidence 998 9999999999999763
|
The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A. |
| >TIGR03230 lipo_lipase lipoprotein lipase | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.2e-13 Score=132.97 Aligned_cols=110 Identities=14% Similarity=0.188 Sum_probs=80.1
Q ss_pred EecCCCCeEEEEecCCCCcc---chhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcc---
Q 012188 176 CWSSSSRDTLFVKTQGPSAF---WTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEP--- 249 (468)
Q Consensus 176 ~~~~~~p~vl~lHG~g~s~~---~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~--- 249 (468)
.+++++|++|++||++.+.. |...+...|.. ....|+||++|++|+|.|..+.... ....+++++ ..+++.
T Consensus 36 ~Fn~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~-~~~d~nVI~VDw~g~g~s~y~~a~~-~t~~vg~~l-a~lI~~L~~ 112 (442)
T TIGR03230 36 NFNHETKTFIVIHGWTVTGMFESWVPKLVAALYE-REPSANVIVVDWLSRAQQHYPTSAA-YTKLVGKDV-AKFVNWMQE 112 (442)
T ss_pred CcCCCCCeEEEECCCCcCCcchhhHHHHHHHHHh-ccCCCEEEEEECCCcCCCCCccccc-cHHHHHHHH-HHHHHHHHH
Confidence 34677899999999986543 44334443320 1136999999999999987654322 334554555 344443
Q ss_pred ---cCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCC
Q 012188 250 ---NKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPY 288 (468)
Q Consensus 250 ---l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~ 288 (468)
++.++++||||||||.+|..++.++|++|.++++++|..
T Consensus 113 ~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAg 154 (442)
T TIGR03230 113 EFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAG 154 (442)
T ss_pred hhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCC
Confidence 246899999999999999999999999999999999864
|
Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity. |
| >PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway | Back alignment and domain information |
|---|
Probab=99.44 E-value=1e-12 Score=120.16 Aligned_cols=178 Identities=15% Similarity=0.129 Sum_probs=107.7
Q ss_pred CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCC-CCCCC-CCCC--------CHHHHHHHHH---HHH
Q 012188 180 SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGR-SPKPT-DSLY--------TVREHLDMIE---KSV 246 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~-S~~~~-~~~~--------t~~~~~~di~---~~l 246 (468)
+.|.||++|+..+-..+...+...|+ ++||.|+++|+-+-.. ..... .... ..+...+++. ..+
T Consensus 13 ~~~~Vvv~~d~~G~~~~~~~~ad~lA---~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l 89 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLNPNIRDLADRLA---EEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYL 89 (218)
T ss_dssp SEEEEEEE-BTTBS-HHHHHHHHHHH---HTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCchHHHHHHHHHH---hcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 46899999997765555555677776 6899999999765333 11111 0000 0122333331 233
Q ss_pred hccc--CCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHH
Q 012188 247 IEPN--KVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWY 324 (468)
Q Consensus 247 ~~~l--~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (468)
.++- +.+++.++|+||||.+++.++.+. ..+++.|..-|.... .
T Consensus 90 ~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~---~------------------------------ 135 (218)
T PF01738_consen 90 RAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPP---P------------------------------ 135 (218)
T ss_dssp HCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSG---G------------------------------
T ss_pred HhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCC---C------------------------------
Confidence 3333 246999999999999999999887 578999887761110 0
Q ss_pred HHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEe
Q 012188 325 EHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFH 404 (468)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~ 404 (468)
.......++++|+++++
T Consensus 136 ---------------------------------------------------------------~~~~~~~~~~~P~l~~~ 152 (218)
T PF01738_consen 136 ---------------------------------------------------------------PPLEDAPKIKAPVLILF 152 (218)
T ss_dssp ---------------------------------------------------------------GHHHHGGG--S-EEEEE
T ss_pred ---------------------------------------------------------------cchhhhcccCCCEeecC
Confidence 00011256789999999
Q ss_pred eCCCCccChhhHHHHHHhC----CCCeEEEecCCCccccccCcH-------HHHHHHHHHHHhh
Q 012188 405 GEDDELIPVECSYNVQRKI----PRARVKVIEKKDHITIVVGRQ-------KTFARELEEIWRS 457 (468)
Q Consensus 405 G~~D~~vp~~~~~~l~~~~----p~~~l~~i~~~gH~~~~~e~p-------~~~~~~i~~fl~~ 457 (468)
|++|+.+|.+..+.+.+.+ ...++++++|++|..+....+ ++-.+.+.+||++
T Consensus 153 g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~ 216 (218)
T PF01738_consen 153 GENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKR 216 (218)
T ss_dssp ETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC
T ss_pred ccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHh
Confidence 9999999999877666655 567999999999998863322 3445667777754
|
Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A. |
| >PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases | Back alignment and domain information |
|---|
Probab=99.43 E-value=5.1e-12 Score=115.32 Aligned_cols=178 Identities=15% Similarity=0.147 Sum_probs=101.7
Q ss_pred cCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCC------CCC---CCCC-----CCC---CCCHHHHHH
Q 012188 178 SSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLG------FGR---SPKP-----TDS---LYTVREHLD 240 (468)
Q Consensus 178 ~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G------~G~---S~~~-----~~~---~~t~~~~~~ 240 (468)
++..+.||++||.|.+...+..+.... ......+++.++-|- .|. +-.+ ... ...+.+.++
T Consensus 11 ~~~~~lvi~LHG~G~~~~~~~~~~~~~--~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~ 88 (216)
T PF02230_consen 11 GKAKPLVILLHGYGDSEDLFALLAELN--LALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAE 88 (216)
T ss_dssp ST-SEEEEEE--TTS-HHHHHHHHHHH--TCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHH
T ss_pred CCCceEEEEECCCCCCcchhHHHHhhc--ccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHH
Confidence 445689999999998775443232211 112567787776442 233 2111 101 111222222
Q ss_pred HHHHHHhc-----ccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhh
Q 012188 241 MIEKSVIE-----PNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIA 315 (468)
Q Consensus 241 di~~~l~~-----~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (468)
.+ ..+++ ....+++++.|.|.||.+|+.++.++|+.+.++|++++........
T Consensus 89 ~l-~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~--------------------- 146 (216)
T PF02230_consen 89 RL-DELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESEL--------------------- 146 (216)
T ss_dssp HH-HHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCC---------------------
T ss_pred HH-HHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccccc---------------------
Confidence 33 23332 2344689999999999999999999999999999999765331100
Q ss_pred hhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhcc
Q 012188 316 FGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNH 395 (468)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (468)
.... ...
T Consensus 147 ----------------------------------------------------------------------~~~~---~~~ 153 (216)
T PF02230_consen 147 ----------------------------------------------------------------------EDRP---EAL 153 (216)
T ss_dssp ----------------------------------------------------------------------HCCH---CCC
T ss_pred ----------------------------------------------------------------------cccc---ccc
Confidence 0000 011
Q ss_pred CCCcEEEEeeCCCCccChhhHHHHHHhC----CCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 396 VKCDVNVFHGEDDELIPVECSYNVQRKI----PRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 396 i~~PvLii~G~~D~~vp~~~~~~l~~~~----p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
-+.|++++||++|+++|.+.++...+.+ .+++++.++|.||.+. .+..+.+.+||++
T Consensus 154 ~~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~-----~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 154 AKTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEIS-----PEELRDLREFLEK 214 (216)
T ss_dssp CTS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS-------HHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCC-----HHHHHHHHHHHhh
Confidence 1689999999999999999887777665 3568999999999765 3566667788765
|
; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A. |
| >KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.4e-11 Score=111.33 Aligned_cols=252 Identities=13% Similarity=0.155 Sum_probs=147.2
Q ss_pred CCCeEEEEecCCCCccc-hhh--hhhhccccCCCcceEEEECCCCCCCC--CCCCC-CCCCHHHHHHHHHHHHhcccCCc
Q 012188 180 SSRDTLFVKTQGPSAFW-TET--LFPNFSSASKSTYRLFAIDLLGFGRS--PKPTD-SLYTVREHLDMIEKSVIEPNKVK 253 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~-~~~--~~~~L~~~~~~gy~Via~D~~G~G~S--~~~~~-~~~t~~~~~~di~~~l~~~l~~~ 253 (468)
++|.+|-.|..|-+... +.. .+|..++.+ ..|.|+-+|.|||-.- .-+.+ ..-++++++++| ..++++++.+
T Consensus 45 ~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~-~~fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l-~~VL~~f~lk 122 (326)
T KOG2931|consen 45 NKPAIITYHDLGLNHKSCFQGFFNFPDMAEIL-EHFCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADML-PEVLDHFGLK 122 (326)
T ss_pred CCceEEEecccccchHhHhHHhhcCHhHHHHH-hheEEEecCCCccccCCccCCCCCCCCCHHHHHHHH-HHHHHhcCcc
Confidence 47888889998864332 111 223333333 4599999999998443 44444 345999999999 6999999999
Q ss_pred eEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHH-HHHHHhhHHH
Q 012188 254 SFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMAC-WYEHISRTIC 332 (468)
Q Consensus 254 ~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 332 (468)
.++-+|--.|++|..++|..||++|-++||+++......+ .+|...++.........--...... ...++.+..
T Consensus 123 ~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gw----iew~~~K~~s~~l~~~Gmt~~~~d~ll~H~Fg~e~- 197 (326)
T KOG2931|consen 123 SVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGW----IEWAYNKVSSNLLYYYGMTQGVKDYLLAHHFGKEE- 197 (326)
T ss_pred eEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchH----HHHHHHHHHHHHHHhhchhhhHHHHHHHHHhcccc-
Confidence 9999999999999999999999999999999976544222 3333333221110000000000000 000110000
Q ss_pred HHhhccchhHHHHHHHHhhhHHHHHhhhccccccc-hhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCcc
Q 012188 333 LLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTH-NAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELI 411 (468)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~v 411 (468)
...+.+... .++..+. .... .+.+..+..+.....-... .......++||+|++.|++.+.+
T Consensus 198 --~~~~~diVq---------~Yr~~l~----~~~N~~Nl~~fl~ayn~R~DL~~~--r~~~~~tlkc~vllvvGd~Sp~~ 260 (326)
T KOG2931|consen 198 --LGNNSDIVQ---------EYRQHLG----ERLNPKNLALFLNAYNGRRDLSIE--RPKLGTTLKCPVLLVVGDNSPHV 260 (326)
T ss_pred --ccccHHHHH---------HHHHHHH----hcCChhHHHHHHHHhcCCCCcccc--CCCcCccccccEEEEecCCCchh
Confidence 000000101 1111111 1111 1111222222211111111 11111256799999999998876
Q ss_pred ChhhHHHHHHhC-C-CCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 412 PVECSYNVQRKI-P-RARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 412 p~~~~~~l~~~~-p-~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
. ...++..++ | +..+..+.++|-.+.. ++|..+++.+.-|++..
T Consensus 261 ~--~vv~~n~~Ldp~~ttllk~~d~g~l~~e-~qP~kl~ea~~~FlqG~ 306 (326)
T KOG2931|consen 261 S--AVVECNSKLDPTYTTLLKMADCGGLVQE-EQPGKLAEAFKYFLQGM 306 (326)
T ss_pred h--hhhhhhcccCcccceEEEEcccCCcccc-cCchHHHHHHHHHHccC
Confidence 4 455666655 2 5689999999999884 89999999999999764
|
|
| >PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function | Back alignment and domain information |
|---|
Probab=99.43 E-value=9e-12 Score=116.74 Aligned_cols=111 Identities=17% Similarity=0.322 Sum_probs=91.5
Q ss_pred CCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCC-----CCCCCCHHHHHHHHHHHHhcc----c-
Q 012188 181 SRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKP-----TDSLYTVREHLDMIEKSVIEP----N- 250 (468)
Q Consensus 181 ~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~-----~~~~~t~~~~~~di~~~l~~~----l- 250 (468)
+..+++++|+||-..+|..++..|.+.+...|.|+++.+.||-.++.. ....+++++.++... .+++. .
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~-~~i~~~~~~~~ 80 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKI-DFIKELIPQKN 80 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHH-HHHHHHhhhhc
Confidence 357899999999999998899988877778999999999999887654 346789999887663 33332 2
Q ss_pred -CCceEEEEEEcccHHHHHHHHHhCC---CccceEEEecCCCCCCC
Q 012188 251 -KVKSFHIVAHSLGCILALALAVKHP---GSVKSLTLLAPPYYPVP 292 (468)
Q Consensus 251 -~~~~i~lvGhS~Gg~ial~~a~~~p---~~v~~lVl~~p~~~~~~ 292 (468)
...+++++|||.|+++++++..+++ .+|.+.+++-|......
T Consensus 81 ~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ia 126 (266)
T PF10230_consen 81 KPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDIA 126 (266)
T ss_pred CCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcccccc
Confidence 3468999999999999999999999 78999999998765433
|
|
| >PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics [] | Back alignment and domain information |
|---|
Probab=99.42 E-value=8.4e-12 Score=115.00 Aligned_cols=100 Identities=20% Similarity=0.266 Sum_probs=80.8
Q ss_pred CeEEEEecCCCCccchhhhhhhccccCCCc-ceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceEEEEEE
Q 012188 182 RDTLFVKTQGPSAFWTETLFPNFSSASKST-YRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAH 260 (468)
Q Consensus 182 p~vl~lHG~g~s~~~~~~~~~~L~~~~~~g-y~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i~lvGh 260 (468)
++|+++|+.+++...+..+.+.+. .. +.|+.++.+|.+....+ ..+++++++.....+.+.....++.|+||
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~----~~~~~v~~i~~~~~~~~~~~---~~si~~la~~y~~~I~~~~~~gp~~L~G~ 73 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALP----DDVIGVYGIEYPGRGDDEPP---PDSIEELASRYAEAIRARQPEGPYVLAGW 73 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHT----TTEEEEEEECSTTSCTTSHE---ESSHHHHHHHHHHHHHHHTSSSSEEEEEE
T ss_pred CeEEEEcCCccCHHHHHHHHHhCC----CCeEEEEEEecCCCCCCCCC---CCCHHHHHHHHHHHhhhhCCCCCeeehcc
Confidence 479999999998888888888887 64 99999999999833322 35899999988666666666569999999
Q ss_pred cccHHHHHHHHHhC---CCccceEEEecCCC
Q 012188 261 SLGCILALALAVKH---PGSVKSLTLLAPPY 288 (468)
Q Consensus 261 S~Gg~ial~~a~~~---p~~v~~lVl~~p~~ 288 (468)
|+||.+|..+|.+. ...+..+++++++.
T Consensus 74 S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~ 104 (229)
T PF00975_consen 74 SFGGILAFEMARQLEEAGEEVSRLILIDSPP 104 (229)
T ss_dssp THHHHHHHHHHHHHHHTT-SESEEEEESCSS
T ss_pred CccHHHHHHHHHHHHHhhhccCceEEecCCC
Confidence 99999999999764 45699999999654
|
Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A .... |
| >KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.39 E-value=2.8e-12 Score=118.91 Aligned_cols=108 Identities=18% Similarity=0.230 Sum_probs=93.7
Q ss_pred CeEEEEecCCCCccchhhhhhhccccCCC------cceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceE
Q 012188 182 RDTLFVKTQGPSAFWTETLFPNFSSASKS------TYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSF 255 (468)
Q Consensus 182 p~vl~lHG~g~s~~~~~~~~~~L~~~~~~------gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i 255 (468)
-|+|++|||+++-.-+..++|.|.+.-+. -|.||+|.+||+|.|+++........+.+..+ +.++-++|.+++
T Consensus 153 ~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~GFn~~a~Arvm-rkLMlRLg~nkf 231 (469)
T KOG2565|consen 153 KPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTGFNAAATARVM-RKLMLRLGYNKF 231 (469)
T ss_pred cceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCCccHHHHHHHH-HHHHHHhCccee
Confidence 38999999999877666799999855322 38999999999999999988778888888888 799999999999
Q ss_pred EEEEEcccHHHHHHHHHhCCCccceEEEecCCCCC
Q 012188 256 HIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 256 ~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~ 290 (468)
+|-|..||+.|+..+|..+|+.|.|+-+-.+...+
T Consensus 232 fiqGgDwGSiI~snlasLyPenV~GlHlnm~~~~s 266 (469)
T KOG2565|consen 232 FIQGGDWGSIIGSNLASLYPENVLGLHLNMCFVNS 266 (469)
T ss_pred EeecCchHHHHHHHHHhhcchhhhHhhhcccccCC
Confidence 99999999999999999999999998876655443
|
|
| >TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular | Back alignment and domain information |
|---|
Probab=99.38 E-value=4.4e-11 Score=116.70 Aligned_cols=269 Identities=13% Similarity=0.123 Sum_probs=145.3
Q ss_pred CeEEEEecCCCCcc-chhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceEEEEEE
Q 012188 182 RDTLFVKTQGPSAF-WTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAH 260 (468)
Q Consensus 182 p~vl~lHG~g~s~~-~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i~lvGh 260 (468)
||||++.-..+... ..+.+.+.|. .|+.|+..|+.--+..+... ...+++|+++-+ ...++++|.+ ++++|+
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll----~g~dVYl~DW~~p~~vp~~~-~~f~ldDYi~~l-~~~i~~~G~~-v~l~Gv 175 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALL----PDHDVYITDWVNARMVPLSA-GKFDLEDYIDYL-IEFIRFLGPD-IHVIAV 175 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHh----CCCcEEEEeCCCCCCCchhc-CCCCHHHHHHHH-HHHHHHhCCC-CcEEEE
Confidence 78999988765332 2233455554 49999999998777553222 357899999877 6778888877 999999
Q ss_pred cccHHHHHHHHHhC-----CCccceEEEecCCCCCCCCCchhh--------HHHHHhhcCCCCCchhhhhh-hhHHHHHH
Q 012188 261 SLGCILALALAVKH-----PGSVKSLTLLAPPYYPVPKGAQAS--------QYVMRKVAPRRVWPLIAFGA-SMACWYEH 326 (468)
Q Consensus 261 S~Gg~ial~~a~~~-----p~~v~~lVl~~p~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 326 (468)
|+||.+++.+++.+ |.++++++++++|.+......... .++.+.....-.......++ ....+...
T Consensus 176 CqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~ 255 (406)
T TIGR01849 176 CQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQL 255 (406)
T ss_pred chhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHHH
Confidence 99999977766655 677999999999887644211111 11222211110000000000 00000000
Q ss_pred HhhHHHHHhhccchhHHHHHHHHhhh--HH---HHHhh--hccccccchhHHhhHhHHHhcccccccc----hHHHhhcc
Q 012188 327 ISRTICLLICKNHRVWEFLAKLVTRN--RI---RTFLL--EGFFCHTHNAAWHTLHNIICGTANKLDG----YLDAVRNH 395 (468)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 395 (468)
..-............++........+ .. ..+.. ..............+..++....-.... -..-.+++
T Consensus 256 ~~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~~Vdl~~ 335 (406)
T TIGR01849 256 AGFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLPQGKFIVEGKRVDPGA 335 (406)
T ss_pred HHHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCccCCcEEECCEEecHHH
Confidence 00000000000011122221111000 00 00000 0001111111112222222221111000 00112368
Q ss_pred CC-CcEEEEeeCCCCccChhhHHHHHHhC---C--CCeEEEecCCCcccccc--CcHHHHHHHHHHHHhh
Q 012188 396 VK-CDVNVFHGEDDELIPVECSYNVQRKI---P--RARVKVIEKKDHITIVV--GRQKTFARELEEIWRS 457 (468)
Q Consensus 396 i~-~PvLii~G~~D~~vp~~~~~~l~~~~---p--~~~l~~i~~~gH~~~~~--e~p~~~~~~i~~fl~~ 457 (468)
|+ +|+|.+.|++|.++|+++++.+.+.+ | +.+.++.+++||+..+. .-++++.-.|.+||.+
T Consensus 336 I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 336 ITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred CcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 88 99999999999999999999998874 5 33577777899998873 3357788899999975
|
This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some |
| >PRK10162 acetyl esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.9e-11 Score=116.87 Aligned_cols=104 Identities=19% Similarity=0.154 Sum_probs=70.8
Q ss_pred CCCeEEEEecCCC---CccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHh---cccCC-
Q 012188 180 SSRDTLFVKTQGP---SAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVI---EPNKV- 252 (468)
Q Consensus 180 ~~p~vl~lHG~g~---s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~---~~l~~- 252 (468)
+.|+||++||+|. +...+..+...|+. ..|+.|+.+|+|.......+. .++|..+.+ ..+. +.+++
T Consensus 80 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~--~~g~~Vv~vdYrlape~~~p~----~~~D~~~a~-~~l~~~~~~~~~d 152 (318)
T PRK10162 80 SQATLFYLHGGGFILGNLDTHDRIMRLLAS--YSGCTVIGIDYTLSPEARFPQ----AIEEIVAVC-CYFHQHAEDYGIN 152 (318)
T ss_pred CCCEEEEEeCCcccCCCchhhhHHHHHHHH--HcCCEEEEecCCCCCCCCCCC----cHHHHHHHH-HHHHHhHHHhCCC
Confidence 4588999999874 32233345666651 248999999999755433222 445554444 3443 34554
Q ss_pred -ceEEEEEEcccHHHHHHHHHhC------CCccceEEEecCCCCC
Q 012188 253 -KSFHIVAHSLGCILALALAVKH------PGSVKSLTLLAPPYYP 290 (468)
Q Consensus 253 -~~i~lvGhS~Gg~ial~~a~~~------p~~v~~lVl~~p~~~~ 290 (468)
++++|+|+|+||.+++.++.+. +..+++++++.|....
T Consensus 153 ~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 153 MSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGL 197 (318)
T ss_pred hhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCC
Confidence 5899999999999999988753 3578999999886543
|
|
| >cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.5e-12 Score=122.81 Aligned_cols=114 Identities=17% Similarity=0.234 Sum_probs=79.1
Q ss_pred eEEEecCCCCeEEEEecCCCCc--cchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHH---HHHh
Q 012188 173 FCTCWSSSSRDTLFVKTQGPSA--FWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIE---KSVI 247 (468)
Q Consensus 173 ~~~~~~~~~p~vl~lHG~g~s~--~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~---~~l~ 247 (468)
....+.+++|++|++||++++. .|...+...+. .+.+|+|+++|++|++.+..+. ...+.....+++. ..+.
T Consensus 28 ~~~~f~~~~p~vilIHG~~~~~~~~~~~~l~~~ll--~~~~~nVi~vD~~~~~~~~y~~-a~~~~~~v~~~la~~l~~L~ 104 (275)
T cd00707 28 KNSNFNPSRPTRFIIHGWTSSGEESWISDLRKAYL--SRGDYNVIVVDWGRGANPNYPQ-AVNNTRVVGAELAKFLDFLV 104 (275)
T ss_pred hhcCCCCCCCcEEEEcCCCCCCCCcHHHHHHHHHH--hcCCCEEEEEECccccccChHH-HHHhHHHHHHHHHHHHHHHH
Confidence 3344467789999999998765 46554544332 1358999999999984432211 1123333333331 3344
Q ss_pred cc--cCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCC
Q 012188 248 EP--NKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYY 289 (468)
Q Consensus 248 ~~--l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~ 289 (468)
+. ++.+++++|||||||.+|..++.++|++++++++++|...
T Consensus 105 ~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 105 DNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred HhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 43 3457899999999999999999999999999999998654
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >COG0400 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.8e-11 Score=107.70 Aligned_cols=172 Identities=13% Similarity=0.145 Sum_probs=111.4
Q ss_pred cCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCC--CCCC---CCCCCCCCCHHH-------HHHHHHHH
Q 012188 178 SSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLG--FGRS---PKPTDSLYTVRE-------HLDMIEKS 245 (468)
Q Consensus 178 ~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G--~G~S---~~~~~~~~t~~~-------~~~di~~~ 245 (468)
++..|+||++||.|+.... +++. ....-.++.++.+-=+- .|.- .......++.++ +++.+ ..
T Consensus 15 ~p~~~~iilLHG~Ggde~~---~~~~-~~~~~P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l-~~ 89 (207)
T COG0400 15 DPAAPLLILLHGLGGDELD---LVPL-PELILPNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFL-EE 89 (207)
T ss_pred CCCCcEEEEEecCCCChhh---hhhh-hhhcCCCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHH-HH
Confidence 4456789999999965442 3331 11222556666553110 1110 000112223333 33333 35
Q ss_pred HhcccCC--ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHH
Q 012188 246 VIEPNKV--KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACW 323 (468)
Q Consensus 246 l~~~l~~--~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (468)
+.+++++ ++++++|+|-|+.+++.+..++|+.++++|+++|........
T Consensus 90 ~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~~----------------------------- 140 (207)
T COG0400 90 LAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPEL----------------------------- 140 (207)
T ss_pred HHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCcc-----------------------------
Confidence 5566676 799999999999999999999999999999999865441110
Q ss_pred HHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEE
Q 012188 324 YEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVF 403 (468)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii 403 (468)
. ...-..|++++
T Consensus 141 --------------------------------------------------------------~------~~~~~~pill~ 152 (207)
T COG0400 141 --------------------------------------------------------------L------PDLAGTPILLS 152 (207)
T ss_pred --------------------------------------------------------------c------cccCCCeEEEe
Confidence 0 01226899999
Q ss_pred eeCCCCccChhhHHHHHHhCC----CCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 404 HGEDDELIPVECSYNVQRKIP----RARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 404 ~G~~D~~vp~~~~~~l~~~~p----~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
||+.|+++|...+.++.+.+. +++..+++ .||.+.. +..+.+.+|+.+
T Consensus 153 hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH~i~~-----e~~~~~~~wl~~ 204 (207)
T COG0400 153 HGTEDPVVPLALAEALAEYLTASGADVEVRWHE-GGHEIPP-----EELEAARSWLAN 204 (207)
T ss_pred ccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-CCCcCCH-----HHHHHHHHHHHh
Confidence 999999999998888877663 56888888 7997653 455666667765
|
|
| >PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO | Back alignment and domain information |
|---|
Probab=99.32 E-value=1e-10 Score=102.80 Aligned_cols=90 Identities=21% Similarity=0.241 Sum_probs=63.5
Q ss_pred EEEEecCCCCccchh--hhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceEEEEEEc
Q 012188 184 TLFVKTQGPSAFWTE--TLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHS 261 (468)
Q Consensus 184 vl~lHG~g~s~~~~~--~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i~lvGhS 261 (468)
||++||+.++..-.. .+...+.+ ......+..+|++- ...+.++.+ ..+++....+.+.|||.|
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~-~~~~~~~~~p~l~~------------~p~~a~~~l-~~~i~~~~~~~~~liGSS 67 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAE-HGPDIQYPCPDLPP------------FPEEAIAQL-EQLIEELKPENVVLIGSS 67 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHH-hCCCceEECCCCCc------------CHHHHHHHH-HHHHHhCCCCCeEEEEEC
Confidence 899999987654332 12222221 11345777777764 566667777 577777776779999999
Q ss_pred ccHHHHHHHHHhCCCccceEEEecCCCCC
Q 012188 262 LGCILALALAVKHPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 262 ~Gg~ial~~a~~~p~~v~~lVl~~p~~~~ 290 (468)
|||+.|..+|.+++ +++ |+++|...+
T Consensus 68 lGG~~A~~La~~~~--~~a-vLiNPav~p 93 (187)
T PF05728_consen 68 LGGFYATYLAERYG--LPA-VLINPAVRP 93 (187)
T ss_pred hHHHHHHHHHHHhC--CCE-EEEcCCCCH
Confidence 99999999999986 444 899988755
|
One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised. |
| >PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate [] | Back alignment and domain information |
|---|
Probab=99.31 E-value=9e-11 Score=113.50 Aligned_cols=211 Identities=15% Similarity=0.088 Sum_probs=106.2
Q ss_pred eEEEEecCCCC-c-cchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhc--ccCCceEEEE
Q 012188 183 DTLFVKTQGPS-A-FWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIE--PNKVKSFHIV 258 (468)
Q Consensus 183 ~vl~lHG~g~s-~-~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~--~l~~~~i~lv 258 (468)
|+|++-|+..+ . .++..+.+.+. .+|+.++++|.||.|.|....-. .+.+.+.+.+.+.+.+ .++..++.++
T Consensus 191 P~VIv~gGlDs~qeD~~~l~~~~l~---~rGiA~LtvDmPG~G~s~~~~l~-~D~~~l~~aVLd~L~~~p~VD~~RV~~~ 266 (411)
T PF06500_consen 191 PTVIVCGGLDSLQEDLYRLFRDYLA---PRGIAMLTVDMPGQGESPKWPLT-QDSSRLHQAVLDYLASRPWVDHTRVGAW 266 (411)
T ss_dssp EEEEEE--TTS-GGGGHHHHHCCCH---HCT-EEEEE--TTSGGGTTT-S--S-CCHHHHHHHHHHHHSTTEEEEEEEEE
T ss_pred CEEEEeCCcchhHHHHHHHHHHHHH---hCCCEEEEEccCCCcccccCCCC-cCHHHHHHHHHHHHhcCCccChhheEEE
Confidence 55555554443 2 23332334443 58999999999999999643221 1222333344233333 2344699999
Q ss_pred EEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHHhhcc
Q 012188 259 AHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKN 338 (468)
Q Consensus 259 GhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (468)
|.|+||++|.++|..++++++++|..+++....-.. . .... ..|.+. . ..+...+...
T Consensus 267 G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~---~-~~~~------~~P~my--------~----d~LA~rlG~~ 324 (411)
T PF06500_consen 267 GFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTD---P-EWQQ------RVPDMY--------L----DVLASRLGMA 324 (411)
T ss_dssp EETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH----H-HHHT------TS-HHH--------H----HHHHHHCT-S
T ss_pred EeccchHHHHHHHHhcccceeeEeeeCchHhhhhcc---H-HHHh------cCCHHH--------H----HHHHHHhCCc
Confidence 999999999999999999999999999886441100 0 0000 001000 0 0000000000
Q ss_pred chhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhh--ccCCCcEEEEeeCCCCccChhhH
Q 012188 339 HRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVR--NHVKCDVNVFHGEDDELIPVECS 416 (468)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~PvLii~G~~D~~vp~~~~ 416 (468)
.. ....+..-.....-. . ..++ .+..+|+|.+.|++|++.|.+..
T Consensus 325 ~~-----------------------------~~~~l~~el~~~SLk-~---qGlL~~rr~~~plL~i~~~~D~v~P~eD~ 371 (411)
T PF06500_consen 325 AV-----------------------------SDESLRGELNKFSLK-T---QGLLSGRRCPTPLLAINGEDDPVSPIEDS 371 (411)
T ss_dssp CE------------------------------HHHHHHHGGGGSTT-T---TTTTTSS-BSS-EEEEEETT-SSS-HHHH
T ss_pred cC-----------------------------CHHHHHHHHHhcCcc-h---hccccCCCCCcceEEeecCCCCCCCHHHH
Confidence 00 000000000000000 0 1112 46689999999999999999999
Q ss_pred HHHHHhCCCCeEEEecCCC-ccccccCcHHHHHHHHHHHHhh
Q 012188 417 YNVQRKIPRARVKVIEKKD-HITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 417 ~~l~~~~p~~~l~~i~~~g-H~~~~~e~p~~~~~~i~~fl~~ 457 (468)
+-++..-.+.+...++... |.. -+.-...+.+||++
T Consensus 372 ~lia~~s~~gk~~~~~~~~~~~g-----y~~al~~~~~Wl~~ 408 (411)
T PF06500_consen 372 RLIAESSTDGKALRIPSKPLHMG-----YPQALDEIYKWLED 408 (411)
T ss_dssp HHHHHTBTT-EEEEE-SSSHHHH-----HHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCceeecCCCccccc-----hHHHHHHHHHHHHH
Confidence 9998887777888887544 332 23666777778865
|
This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C. |
| >PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins | Back alignment and domain information |
|---|
Probab=99.31 E-value=3.4e-10 Score=108.56 Aligned_cols=205 Identities=19% Similarity=0.183 Sum_probs=107.6
Q ss_pred CCeEEEEecCCCCcc-chhhhhhhccccCCCcceEEEECCCCCCC-CCCC------C--C----CCCC------H----H
Q 012188 181 SRDTLFVKTQGPSAF-WTETLFPNFSSASKSTYRLFAIDLLGFGR-SPKP------T--D----SLYT------V----R 236 (468)
Q Consensus 181 ~p~vl~lHG~g~s~~-~~~~~~~~L~~~~~~gy~Via~D~~G~G~-S~~~------~--~----~~~t------~----~ 236 (468)
-|.||.+||.++... |.+ ...... .||.|+.+|.||+|. +... . + +..+ . .
T Consensus 83 ~Pavv~~hGyg~~~~~~~~-~~~~a~----~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~ 157 (320)
T PF05448_consen 83 LPAVVQFHGYGGRSGDPFD-LLPWAA----AGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYL 157 (320)
T ss_dssp EEEEEEE--TT--GGGHHH-HHHHHH----TT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHH
T ss_pred cCEEEEecCCCCCCCCccc-cccccc----CCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHH
Confidence 378999999887643 433 333333 899999999999993 3110 0 0 0111 1 2
Q ss_pred HHHHHHHHHHhcc--cCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchh
Q 012188 237 EHLDMIEKSVIEP--NKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLI 314 (468)
Q Consensus 237 ~~~~di~~~l~~~--l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (468)
|.+..+ +.+... .+.+++.+.|.|+||.+++.+|+..| +|++++...|.... .............+.
T Consensus 158 D~~rav-d~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d-------~~~~~~~~~~~~~y~-- 226 (320)
T PF05448_consen 158 DAVRAV-DFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCD-------FRRALELRADEGPYP-- 226 (320)
T ss_dssp HHHHHH-HHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSS-------HHHHHHHT--STTTH--
T ss_pred HHHHHH-HHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccc-------hhhhhhcCCccccHH--
Confidence 222233 223322 33469999999999999999999987 69999998876533 222211111001110
Q ss_pred hhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHh---h-hHHHHHhhhccccccchhHHhhHhHHHhcccccccchHH
Q 012188 315 AFGASMACWYEHISRTICLLICKNHRVWEFLAKLVT---R-NRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLD 390 (468)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (468)
.+...+. . ......+.+ ++ . --+..
T Consensus 227 -----------------------------~~~~~~~~~d~~~~~~~~v~~------------~L-~---------Y~D~~ 255 (320)
T PF05448_consen 227 -----------------------------EIRRYFRWRDPHHEREPEVFE------------TL-S---------YFDAV 255 (320)
T ss_dssp -----------------------------HHHHHHHHHSCTHCHHHHHHH------------HH-H---------TT-HH
T ss_pred -----------------------------HHHHHHhccCCCcccHHHHHH------------HH-h---------hhhHH
Confidence 0000000 0 000000000 00 0 01122
Q ss_pred HhhccCCCcEEEEeeCCCCccChhhHHHHHHhCC-CCeEEEecCCCccccccCcHHHH-HHHHHHHHhh
Q 012188 391 AVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIP-RARVKVIEKKDHITIVVGRQKTF-ARELEEIWRS 457 (468)
Q Consensus 391 ~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p-~~~l~~i~~~gH~~~~~e~p~~~-~~~i~~fl~~ 457 (468)
...+.|++|+++-.|-.|.++|+.....+++.++ ..++.+++..||... ..+ .+...+||.+
T Consensus 256 nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~~-----~~~~~~~~~~~l~~ 319 (320)
T PF05448_consen 256 NFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHEYG-----PEFQEDKQLNFLKE 319 (320)
T ss_dssp HHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--SSTT-----HHHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCCCch-----hhHHHHHHHHHHhc
Confidence 3347889999999999999999999999999997 468999999999644 244 6677777764
|
Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F .... |
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=6.1e-11 Score=125.50 Aligned_cols=107 Identities=9% Similarity=0.027 Sum_probs=79.3
Q ss_pred CCCCeEEEEecCCCCcc---chhhhhhhccccCCCcceEEEECCCCC---CCCCCC----CCCCCCHHHHHHHHHHHHhc
Q 012188 179 SSSRDTLFVKTQGPSAF---WTETLFPNFSSASKSTYRLFAIDLLGF---GRSPKP----TDSLYTVREHLDMIEKSVIE 248 (468)
Q Consensus 179 ~~~p~vl~lHG~g~s~~---~~~~~~~~L~~~~~~gy~Via~D~~G~---G~S~~~----~~~~~t~~~~~~di~~~l~~ 248 (468)
++.|.||++||+++... |.......+ ++||.|+.++.||- |+.-.. .....+++|+++.+ ..+++
T Consensus 443 ~~~P~ll~~hGg~~~~~~p~f~~~~~~l~----~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~-~~Lv~ 517 (686)
T PRK10115 443 GHNPLLVYGYGSYGASIDADFSFSRLSLL----DRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDAC-DALLK 517 (686)
T ss_pred CCCCEEEEEECCCCCCCCCCccHHHHHHH----HCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHH-HHHHH
Confidence 34589999999877553 333233333 49999999999994 433111 11346888988888 56766
Q ss_pred c--cCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCC
Q 012188 249 P--NKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 249 ~--l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~ 290 (468)
+ ...+++.+.|.|.||+++..++.++|++++++|...|....
T Consensus 518 ~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~ 561 (686)
T PRK10115 518 LGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDV 561 (686)
T ss_pred cCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhH
Confidence 5 23468999999999999999999999999999999887644
|
|
| >TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.6e-10 Score=116.11 Aligned_cols=104 Identities=16% Similarity=0.179 Sum_probs=78.7
Q ss_pred CCeEEEEecCCCCccch-----hhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHH---HHHhcccCC
Q 012188 181 SRDTLFVKTQGPSAFWT-----ETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIE---KSVIEPNKV 252 (468)
Q Consensus 181 ~p~vl~lHG~g~s~~~~-----~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~---~~l~~~l~~ 252 (468)
+.|||+++.+-...+.. ..+++.|. ++||+|+.+|+++-+.+. ...++++|++.+. +.+.+..|.
T Consensus 215 ~~PLLIVPp~INK~YIlDL~P~~SlVr~lv---~qG~~VflIsW~nP~~~~----r~~~ldDYv~~i~~Ald~V~~~tG~ 287 (560)
T TIGR01839 215 ARPLLVVPPQINKFYIFDLSPEKSFVQYCL---KNQLQVFIISWRNPDKAH----REWGLSTYVDALKEAVDAVRAITGS 287 (560)
T ss_pred CCcEEEechhhhhhheeecCCcchHHHHHH---HcCCeEEEEeCCCCChhh----cCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 47999999976433311 33555554 699999999999966553 3457788876552 345556788
Q ss_pred ceEEEEEEcccHHHHHH----HHHhCCC-ccceEEEecCCCCCC
Q 012188 253 KSFHIVAHSLGCILALA----LAVKHPG-SVKSLTLLAPPYYPV 291 (468)
Q Consensus 253 ~~i~lvGhS~Gg~ial~----~a~~~p~-~v~~lVl~~p~~~~~ 291 (468)
+++.++|+|+||.+++. +++++++ +|++++++.++....
T Consensus 288 ~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~ 331 (560)
T TIGR01839 288 RDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDST 331 (560)
T ss_pred CCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccC
Confidence 99999999999999987 8888886 899999999887754
|
This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >TIGR00976 /NonD putative hydrolase, CocE/NonD family | Back alignment and domain information |
|---|
Probab=99.27 E-value=1e-10 Score=121.63 Aligned_cols=118 Identities=14% Similarity=0.030 Sum_probs=81.2
Q ss_pred CCCCceeEEEec----CCCCeEEEEecCCCCcc----chhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHH
Q 012188 167 SDCDCKFCTCWS----SSSRDTLFVKTQGPSAF----WTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREH 238 (468)
Q Consensus 167 ~d~~~~~~~~~~----~~~p~vl~lHG~g~s~~----~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~ 238 (468)
.||..+++..+. ++.|+||++||++.... +.......|. ++||.|+++|+||+|.|++.... +. .+.
T Consensus 4 ~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~---~~Gy~vv~~D~RG~g~S~g~~~~-~~-~~~ 78 (550)
T TIGR00976 4 RDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFV---AQGYAVVIQDTRGRGASEGEFDL-LG-SDE 78 (550)
T ss_pred CCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHH---hCCcEEEEEeccccccCCCceEe-cC-ccc
Confidence 466667766663 24588999999886532 2211222333 58999999999999999875432 11 233
Q ss_pred HHHHH---HHHhcc-cCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCC
Q 012188 239 LDMIE---KSVIEP-NKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYY 289 (468)
Q Consensus 239 ~~di~---~~l~~~-l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~ 289 (468)
++|+. +.+.++ ....+++++||||||.+++.+|..+|+.++++|..++...
T Consensus 79 ~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d 133 (550)
T TIGR00976 79 AADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWD 133 (550)
T ss_pred chHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccc
Confidence 33431 233222 2235899999999999999999999999999999887653
|
This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. |
| >COG4757 Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.5e-11 Score=105.85 Aligned_cols=234 Identities=12% Similarity=0.150 Sum_probs=124.5
Q ss_pred eEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCC--CCCCHHHH-----HHHHHHHHhcccCCceE
Q 012188 183 DTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD--SLYTVREH-----LDMIEKSVIEPNKVKSF 255 (468)
Q Consensus 183 ~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~--~~~t~~~~-----~~di~~~l~~~l~~~~i 255 (468)
-++.-.+.|....+++.+..... ++||.|+.+|+||.|.|..... ..+.+.|+ ...+ +.+.+.++.-+.
T Consensus 32 ~~~va~a~Gv~~~fYRrfA~~a~---~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal-~~~~~~~~~~P~ 107 (281)
T COG4757 32 RLVVAGATGVGQYFYRRFAAAAA---KAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAAL-AALKKALPGHPL 107 (281)
T ss_pred cEEecccCCcchhHhHHHHHHhh---ccCceEEEEecccccCCCccccccCccchhhhhhcchHHHH-HHHHhhCCCCce
Confidence 34444445556666666666655 6999999999999999965443 33444444 3445 455566666789
Q ss_pred EEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHHh
Q 012188 256 HIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLI 335 (468)
Q Consensus 256 ~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (468)
+.||||+||.+.-. +..+| ++.+....+......... .....+.....|.. .+..+.-|.......+ .
T Consensus 108 y~vgHS~GGqa~gL-~~~~~-k~~a~~vfG~gagwsg~m-----~~~~~l~~~~l~~l--v~p~lt~w~g~~p~~l---~ 175 (281)
T COG4757 108 YFVGHSFGGQALGL-LGQHP-KYAAFAVFGSGAGWSGWM-----GLRERLGAVLLWNL--VGPPLTFWKGYMPKDL---L 175 (281)
T ss_pred EEeeccccceeecc-cccCc-ccceeeEeccccccccch-----hhhhcccceeeccc--cccchhhccccCcHhh---c
Confidence 99999999986554 44455 555555544332211100 00000000000000 0001111111000000 0
Q ss_pred hccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhc-ccccccchHHHhhccCCCcEEEEeeCCCCccChh
Q 012188 336 CKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICG-TANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVE 414 (468)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~ 414 (468)
....+. .......|..+...-.. ..........+..+.+.+|+.++...+|+.+|+.
T Consensus 176 G~G~d~----------------------p~~v~RdW~RwcR~p~y~fddp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~A 233 (281)
T COG4757 176 GLGSDL----------------------PGTVMRDWARWCRHPRYYFDDPAMRNYRQVYAAVRTPITFSRALDDPWAPPA 233 (281)
T ss_pred CCCccC----------------------cchHHHHHHHHhcCccccccChhHhHHHHHHHHhcCceeeeccCCCCcCCHH
Confidence 000000 00000111111111000 0011112234455788999999999999999999
Q ss_pred hHHHHHHhCCCCeE--EEecC----CCccccccCcH-HHHHHHHHHHH
Q 012188 415 CSYNVQRKIPRARV--KVIEK----KDHITIVVGRQ-KTFARELEEIW 455 (468)
Q Consensus 415 ~~~~l~~~~p~~~l--~~i~~----~gH~~~~~e~p-~~~~~~i~~fl 455 (468)
..+.+.+..+|+.+ ..++. -||+-.. .++ |...+++.+|+
T Consensus 234 s~d~f~~~y~nApl~~~~~~~~~~~lGH~gyf-R~~~Ealwk~~L~w~ 280 (281)
T COG4757 234 SRDAFASFYRNAPLEMRDLPRAEGPLGHMGYF-REPFEALWKEMLGWF 280 (281)
T ss_pred HHHHHHHhhhcCcccceecCcccCcccchhhh-ccchHHHHHHHHHhh
Confidence 99999999998744 44443 4999987 565 77777777765
|
|
| >COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.3e-10 Score=93.03 Aligned_cols=181 Identities=17% Similarity=0.111 Sum_probs=122.6
Q ss_pred CCeEEEEecCCCCccc--hhhhhhhccccCCCcceEEEECCCC-----CCCCCCCCCCCCCHHHHHHHHHHHHhcccCCc
Q 012188 181 SRDTLFVKTQGPSAFW--TETLFPNFSSASKSTYRLFAIDLLG-----FGRSPKPTDSLYTVREHLDMIEKSVIEPNKVK 253 (468)
Q Consensus 181 ~p~vl~lHG~g~s~~~--~~~~~~~L~~~~~~gy~Via~D~~G-----~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~ 253 (468)
..+||+.||.|.+... -..+...|+ .+|+.|..|+++- .|+...|+....-..++...+ .++...+.-.
T Consensus 14 ~~tilLaHGAGasmdSt~m~~~a~~la---~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~-aql~~~l~~g 89 (213)
T COG3571 14 PVTILLAHGAGASMDSTSMTAVAAALA---RRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAI-AQLRAGLAEG 89 (213)
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHH---hCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHH-HHHHhcccCC
Confidence 3479999998775442 223444444 6899999999764 343323333333445666666 5788887777
Q ss_pred eEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHH
Q 012188 254 SFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICL 333 (468)
Q Consensus 254 ~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (468)
+.++-|+||||-++...+....-.|+++++++-|+.+.....
T Consensus 90 pLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKPe-------------------------------------- 131 (213)
T COG3571 90 PLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKPE-------------------------------------- 131 (213)
T ss_pred ceeeccccccchHHHHHHHhhcCCcceEEEecCccCCCCCcc--------------------------------------
Confidence 999999999999999988876666999999996665522210
Q ss_pred HhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccCh
Q 012188 334 LICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPV 413 (468)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~ 413 (468)
....+.+..+++|+||.+|+.|.+-..
T Consensus 132 -----------------------------------------------------~~Rt~HL~gl~tPtli~qGtrD~fGtr 158 (213)
T COG3571 132 -----------------------------------------------------QLRTEHLTGLKTPTLITQGTRDEFGTR 158 (213)
T ss_pred -----------------------------------------------------cchhhhccCCCCCeEEeecccccccCH
Confidence 001122467799999999999999876
Q ss_pred hhHHHHHHhCCCCeEEEecCCCccccc---------cCcHHHHHHHHHHHHhh
Q 012188 414 ECSYNVQRKIPRARVKVIEKKDHITIV---------VGRQKTFARELEEIWRS 457 (468)
Q Consensus 414 ~~~~~l~~~~p~~~l~~i~~~gH~~~~---------~e~p~~~~~~i~~fl~~ 457 (468)
+.... +...+..++++++++.|..-- ++.-...++.|..|...
T Consensus 159 ~~Va~-y~ls~~iev~wl~~adHDLkp~k~vsgls~~~hL~~~A~~va~~~~~ 210 (213)
T COG3571 159 DEVAG-YALSDPIEVVWLEDADHDLKPRKLVSGLSTADHLKTLAEQVAGWARR 210 (213)
T ss_pred HHHHh-hhcCCceEEEEeccCccccccccccccccHHHHHHHHHHHHHHHHhh
Confidence 65522 223367899999999996531 11224456677777654
|
|
| >PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=99.22 E-value=3.4e-11 Score=90.14 Aligned_cols=76 Identities=20% Similarity=0.273 Sum_probs=63.7
Q ss_pred CCceeEEEecCC---CCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 012188 169 CDCKFCTCWSSS---SRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKS 245 (468)
Q Consensus 169 ~~~~~~~~~~~~---~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~ 245 (468)
|..+.++.|.++ +.+|+++||.+....++..+...|. ++||.|+++|+||||+|++......+++++++|+ ..
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L~---~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~-~~ 76 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSGRYAHLAEFLA---EQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDL-HQ 76 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHHHHHHHHHHHH---hCCCEEEEECCCcCCCCCCcccccCCHHHHHHHH-HH
Confidence 346889999554 4589999999998888888888887 7999999999999999997776667999999999 56
Q ss_pred Hhc
Q 012188 246 VIE 248 (468)
Q Consensus 246 l~~ 248 (468)
+++
T Consensus 77 ~~~ 79 (79)
T PF12146_consen 77 FIQ 79 (79)
T ss_pred HhC
Confidence 653
|
Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. |
| >PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=99.20 E-value=5.7e-10 Score=105.07 Aligned_cols=242 Identities=14% Similarity=0.175 Sum_probs=133.7
Q ss_pred CCCCeEEEEecCCCCccchhhhh---hhccccCCCcceEEEECCCCCCCCCCCCC---CCCCHHHHHH----------HH
Q 012188 179 SSSRDTLFVKTQGPSAFWTETLF---PNFSSASKSTYRLFAIDLLGFGRSPKPTD---SLYTVREHLD----------MI 242 (468)
Q Consensus 179 ~~~p~vl~lHG~g~s~~~~~~~~---~~L~~~~~~gy~Via~D~~G~G~S~~~~~---~~~t~~~~~~----------di 242 (468)
+.+|.+|.+.|.|...+|.+.-+ |.+ ++|+.-+.+..|-||.-..... ...++.|+.- .+
T Consensus 90 ~~rp~~IhLagTGDh~f~rR~~l~a~pLl----~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~L 165 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGFWRRRRLMARPLL----KEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRAL 165 (348)
T ss_pred CCCceEEEecCCCccchhhhhhhhhhHHH----HcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHH
Confidence 34788899999999888876433 333 4799999999999998743332 2223333321 11
Q ss_pred HHHHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHH
Q 012188 243 EKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMAC 322 (468)
Q Consensus 243 ~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (468)
...+++.|..++.+.|.||||.+|...|..+|..+..+-++++..-.. -+..-.+.....|..+... ....
T Consensus 166 -l~Wl~~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~-------vFt~Gvls~~i~W~~L~~q-~~~~ 236 (348)
T PF09752_consen 166 -LHWLEREGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASV-------VFTEGVLSNSINWDALEKQ-FEDT 236 (348)
T ss_pred -HHHHHhcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCc-------chhhhhhhcCCCHHHHHHH-hccc
Confidence 123344588899999999999999999999999877777776543210 0111111122222222111 0000
Q ss_pred HHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEE
Q 012188 323 WYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNV 402 (468)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLi 402 (468)
.+......... ..... .....-...........+...+. ....+.++.. ..-.-.+++
T Consensus 237 ~~~~~~~~~~~---~~~~~---------------~~~~~~~~~~~~Ea~~~m~~~md-~~T~l~nf~~---P~dp~~ii~ 294 (348)
T PF09752_consen 237 VYEEEISDIPA---QNKSL---------------PLDSMEERRRDREALRFMRGVMD-SFTHLTNFPV---PVDPSAIIF 294 (348)
T ss_pred chhhhhccccc---Ccccc---------------cchhhccccchHHHHHHHHHHHH-hhccccccCC---CCCCCcEEE
Confidence 00000000000 00000 00000000000000001111100 0000010000 111234899
Q ss_pred EeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHh
Q 012188 403 FHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWR 456 (468)
Q Consensus 403 i~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~ 456 (468)
+.+++|..||......+.+.+|++++.++++ ||...+.-+.+.|.+.|.+-++
T Consensus 295 V~A~~DaYVPr~~v~~Lq~~WPGsEvR~l~g-GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 295 VAAKNDAYVPRHGVLSLQEIWPGSEVRYLPG-GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred EEecCceEechhhcchHHHhCCCCeEEEecC-CcEEEeeechHHHHHHHHHHhh
Confidence 9999999999999899999999999999997 9987765778889988887664
|
|
| >PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function | Back alignment and domain information |
|---|
Probab=99.18 E-value=3.7e-10 Score=104.84 Aligned_cols=98 Identities=20% Similarity=0.311 Sum_probs=58.2
Q ss_pred CCeEEEEecCCCCc---cchhhhhhhccccCCCcceEEEECCC----CCCCCCCCCCCCCCHHHHHHHHHHHHhc----c
Q 012188 181 SRDTLFVKTQGPSA---FWTETLFPNFSSASKSTYRLFAIDLL----GFGRSPKPTDSLYTVREHLDMIEKSVIE----P 249 (468)
Q Consensus 181 ~p~vl~lHG~g~s~---~~~~~~~~~L~~~~~~gy~Via~D~~----G~G~S~~~~~~~~t~~~~~~di~~~l~~----~ 249 (468)
...||||.|.+..- -+...+...|. +.+|.|+-+-++ |+|.+ ++++.+++| ..+++ .
T Consensus 33 ~~~llfIGGLtDGl~tvpY~~~La~aL~---~~~wsl~q~~LsSSy~G~G~~--------SL~~D~~eI-~~~v~ylr~~ 100 (303)
T PF08538_consen 33 PNALLFIGGLTDGLLTVPYLPDLAEALE---ETGWSLFQVQLSSSYSGWGTS--------SLDRDVEEI-AQLVEYLRSE 100 (303)
T ss_dssp SSEEEEE--TT--TT-STCHHHHHHHHT----TT-EEEEE--GGGBTTS-S----------HHHHHHHH-HHHHHHHHHH
T ss_pred CcEEEEECCCCCCCCCCchHHHHHHHhc---cCCeEEEEEEecCccCCcCcc--------hhhhHHHHH-HHHHHHHHHh
Confidence 44789999977633 34444555553 469999999864 55544 666777776 34433 3
Q ss_pred ----cCCceEEEEEEcccHHHHHHHHHhCC-----CccceEEEecCCCCC
Q 012188 250 ----NKVKSFHIVAHSLGCILALALAVKHP-----GSVKSLTLLAPPYYP 290 (468)
Q Consensus 250 ----l~~~~i~lvGhS~Gg~ial~~a~~~p-----~~v~~lVl~~p~~~~ 290 (468)
.+.++|+|+|||-|+.-+++|..+.. ..|+++||-+|+...
T Consensus 101 ~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDR 150 (303)
T PF08538_consen 101 KGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDR 150 (303)
T ss_dssp S------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---T
T ss_pred hccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCCh
Confidence 14579999999999999999988753 579999999987754
|
This family contains many hypothetical proteins. ; PDB: 2Q0X_B. |
| >COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.8e-09 Score=99.25 Aligned_cols=175 Identities=16% Similarity=0.171 Sum_probs=119.7
Q ss_pred CeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCC-CCCCCCCCC------C----CCCHHHHHHHHHHHHhc--
Q 012188 182 RDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLG-FGRSPKPTD------S----LYTVREHLDMIEKSVIE-- 248 (468)
Q Consensus 182 p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G-~G~S~~~~~------~----~~t~~~~~~di~~~l~~-- 248 (468)
|.||++|+..+-....+.+.+.|+ +.||.|+++|+-+ .|.+..... . ..+..+...|+. ..++
T Consensus 28 P~VIv~hei~Gl~~~i~~~a~rlA---~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-a~~~~L 103 (236)
T COG0412 28 PGVIVLHEIFGLNPHIRDVARRLA---KAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADID-AALDYL 103 (236)
T ss_pred CEEEEEecccCCchHHHHHHHHHH---hCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHH-HHHHHH
Confidence 899999997665444555777776 6999999999876 344422210 0 012245555552 3332
Q ss_pred -cc---CCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHH
Q 012188 249 -PN---KVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWY 324 (468)
Q Consensus 249 -~l---~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (468)
.. ..+++.++|.||||.+++.++.+.| .+++.+..-+........
T Consensus 104 ~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~~~~------------------------------ 152 (236)
T COG0412 104 ARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIADDTA------------------------------ 152 (236)
T ss_pred HhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCCccc------------------------------
Confidence 22 2468999999999999999999988 688888766543220000
Q ss_pred HHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEe
Q 012188 325 EHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFH 404 (468)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~ 404 (468)
. ..++++|+|++.
T Consensus 153 -------------------------------------------------------------~------~~~~~~pvl~~~ 165 (236)
T COG0412 153 -------------------------------------------------------------D------APKIKVPVLLHL 165 (236)
T ss_pred -------------------------------------------------------------c------cccccCcEEEEe
Confidence 0 146799999999
Q ss_pred eCCCCccChhhHHHHHHhCC----CCeEEEecCCCccccccC-------c---HHHHHHHHHHHHhhc
Q 012188 405 GEDDELIPVECSYNVQRKIP----RARVKVIEKKDHITIVVG-------R---QKTFARELEEIWRSS 458 (468)
Q Consensus 405 G~~D~~vp~~~~~~l~~~~p----~~~l~~i~~~gH~~~~~e-------~---p~~~~~~i~~fl~~~ 458 (468)
|+.|..+|.+....+.+.+. +.++.+++++.|..+... + .+.-.+.+.+|+++.
T Consensus 166 ~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~ 233 (236)
T COG0412 166 AGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRL 233 (236)
T ss_pred cccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHh
Confidence 99999999988777766552 568899999989887421 1 134466677787664
|
|
| >COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.17 E-value=4.8e-10 Score=100.25 Aligned_cols=208 Identities=15% Similarity=0.214 Sum_probs=123.5
Q ss_pred CCCCeEEEEecCCCCcc-chhhhhhhccccCCCcceEEEECCCCCCCCCC----CCCC----------------CC----
Q 012188 179 SSSRDTLFVKTQGPSAF-WTETLFPNFSSASKSTYRLFAIDLLGFGRSPK----PTDS----------------LY---- 233 (468)
Q Consensus 179 ~~~p~vl~lHG~g~s~~-~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~----~~~~----------------~~---- 233 (468)
+.-|.||-.||.+++.. |.+ ++..- ..||.|+.+|-||.|.|+. +..+ .|
T Consensus 81 ~~~P~vV~fhGY~g~~g~~~~-~l~wa----~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~ 155 (321)
T COG3458 81 GKLPAVVQFHGYGGRGGEWHD-MLHWA----VAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRG 155 (321)
T ss_pred CccceEEEEeeccCCCCCccc-ccccc----ccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEee
Confidence 34588999999877654 443 33332 3899999999999998832 1111 11
Q ss_pred CHHHHHHHHHHHH--hcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCC
Q 012188 234 TVREHLDMIEKSV--IEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVW 311 (468)
Q Consensus 234 t~~~~~~di~~~l--~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (468)
-..|.+..+ ..+ +....-+++.+.|.|.||.+++.+++..| +++++++.-|.....+.. ..... .
T Consensus 156 v~~D~~~av-e~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~df~r~-------i~~~~-~--- 222 (321)
T COG3458 156 VFLDAVRAV-EILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLSDFPRA-------IELAT-E--- 222 (321)
T ss_pred ehHHHHHHH-HHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccccccccchhh-------eeecc-c---
Confidence 122333333 222 23445579999999999999999998877 799999887765442211 00000 0
Q ss_pred chhhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHH
Q 012188 312 PLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDA 391 (468)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (468)
.....+...+....-. ....+.++.- -+...
T Consensus 223 ----------------------------~~ydei~~y~k~h~~~-----------e~~v~~TL~y----------fD~~n 253 (321)
T COG3458 223 ----------------------------GPYDEIQTYFKRHDPK-----------EAEVFETLSY----------FDIVN 253 (321)
T ss_pred ----------------------------CcHHHHHHHHHhcCch-----------HHHHHHHHhh----------hhhhh
Confidence 0000111111100000 0000000000 01122
Q ss_pred hhccCCCcEEEEeeCCCCccChhhHHHHHHhCCC-CeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 392 VRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPR-ARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 392 ~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~-~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
+..++++|+|+..|-.|+++|+...-.+++.++. .++.+++.-+|.-. |.-..+.+..|++.
T Consensus 254 ~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~~aHe~~----p~~~~~~~~~~l~~ 316 (321)
T COG3458 254 LAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPYFAHEGG----PGFQSRQQVHFLKI 316 (321)
T ss_pred HHHhhccceEEeecccCCCCCChhhHHHhhcccCCceEEEeeccccccC----cchhHHHHHHHHHh
Confidence 3467899999999999999999999999999975 46777887778644 44445556666654
|
|
| >PTZ00472 serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.2e-08 Score=103.12 Aligned_cols=111 Identities=14% Similarity=0.052 Sum_probs=72.7
Q ss_pred CCCCeEEEEecCCCCccchhhhh---hhcc-----------ccCCCcceEEEECCC-CCCCCCCCCC-CCCCHHHHHHHH
Q 012188 179 SSSRDTLFVKTQGPSAFWTETLF---PNFS-----------SASKSTYRLFAIDLL-GFGRSPKPTD-SLYTVREHLDMI 242 (468)
Q Consensus 179 ~~~p~vl~lHG~g~s~~~~~~~~---~~L~-----------~~~~~gy~Via~D~~-G~G~S~~~~~-~~~t~~~~~~di 242 (468)
.+.|.+|+++|+|+++.....+. |... ....+...++.+|+| |+|.|..... ...+.++.++|+
T Consensus 75 ~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d~ 154 (462)
T PTZ00472 75 PEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVDQPAGVGFSYADKADYDHNESEVSEDM 154 (462)
T ss_pred CCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccccCeEEEeCCCCcCcccCCCCCCCCChHHHHHHH
Confidence 34689999999998554321111 1110 011245799999975 8999865332 234557777777
Q ss_pred HHHHhc-------ccCCceEEEEEEcccHHHHHHHHHhC----------CCccceEEEecCCCCC
Q 012188 243 EKSVIE-------PNKVKSFHIVAHSLGCILALALAVKH----------PGSVKSLTLLAPPYYP 290 (468)
Q Consensus 243 ~~~l~~-------~l~~~~i~lvGhS~Gg~ial~~a~~~----------p~~v~~lVl~~p~~~~ 290 (468)
. .+++ +++..+++|+||||||..+..+|.+- +-.++++++-++...+
T Consensus 155 ~-~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~dp 218 (462)
T PTZ00472 155 Y-NFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTDP 218 (462)
T ss_pred H-HHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccCh
Confidence 3 4444 34457999999999999888877652 1247899888877655
|
|
| >PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively [] | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.7e-09 Score=100.96 Aligned_cols=109 Identities=16% Similarity=0.091 Sum_probs=67.7
Q ss_pred CCeEEEEecCCCCccchhhhhhhcc-------ccCCCcceEEEECCCCCCCCCCCCCCC--CCHHHHHHHHHHHHhcccC
Q 012188 181 SRDTLFVKTQGPSAFWTETLFPNFS-------SASKSTYRLFAIDLLGFGRSPKPTDSL--YTVREHLDMIEKSVIEPNK 251 (468)
Q Consensus 181 ~p~vl~lHG~g~s~~~~~~~~~~L~-------~~~~~gy~Via~D~~G~G~S~~~~~~~--~t~~~~~~di~~~l~~~l~ 251 (468)
-|+||..|+++.............. .++++||.|+..|.||.|.|++..... ....|..+.| ..+.++ .
T Consensus 20 ~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~~~~e~~D~~d~I-~W~~~Q-p 97 (272)
T PF02129_consen 20 FPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPMSPNEAQDGYDTI-EWIAAQ-P 97 (272)
T ss_dssp EEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TTSHHHHHHHHHHH-HHHHHC-T
T ss_pred ccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccCChhHHHHHHHHH-HHHHhC-C
Confidence 3788889998864311111111100 023599999999999999998766421 1223333333 333333 4
Q ss_pred C--ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCC
Q 012188 252 V--KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPV 291 (468)
Q Consensus 252 ~--~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~ 291 (468)
. .+|.++|.|++|..++.+|...|..+++++...+.....
T Consensus 98 ws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~ 139 (272)
T PF02129_consen 98 WSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLY 139 (272)
T ss_dssp TEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTC
T ss_pred CCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCccc
Confidence 3 589999999999999999998888999999988765543
|
It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A .... |
| >KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.13 E-value=3.9e-09 Score=102.96 Aligned_cols=292 Identities=16% Similarity=0.111 Sum_probs=154.4
Q ss_pred CCCcCCCCceeEEEe---cCCCCeEEEEecCCCCccchhhhhhh--cc-ccCCCcceEEEECCCCCCCCCCCC------C
Q 012188 163 IPRWSDCDCKFCTCW---SSSSRDTLFVKTQGPSAFWTETLFPN--FS-SASKSTYRLFAIDLLGFGRSPKPT------D 230 (468)
Q Consensus 163 ~~r~~d~~~~~~~~~---~~~~p~vl~lHG~g~s~~~~~~~~~~--L~-~~~~~gy~Via~D~~G~G~S~~~~------~ 230 (468)
..+..||-.+..+.. .+++|+|++.||.-.++..|-...|. |+ -++.+||.|+.-+.||.-.|.+-. .
T Consensus 52 ~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~ 131 (403)
T KOG2624|consen 52 EVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLSPSSD 131 (403)
T ss_pred EEEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccCCcCC
Confidence 455667766666665 25679999999977655543222221 11 112589999999999977663211 1
Q ss_pred ---CCCCHHH-----HHHHHHHHHhcccCCceEEEEEEcccHHHHHHHHHhCCC---ccceEEEecCCCCCCCCCchhhH
Q 012188 231 ---SLYTVRE-----HLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPG---SVKSLTLLAPPYYPVPKGAQASQ 299 (468)
Q Consensus 231 ---~~~t~~~-----~~~di~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~---~v~~lVl~~p~~~~~~~~~~~~~ 299 (468)
-..++.+ +-+.| +.+++..+.++++.+|||.|+.....++...|+ +|+.+++++|+......... ..
T Consensus 132 ~~FW~FS~~Em~~yDLPA~I-dyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~k~~~~~-~~ 209 (403)
T KOG2624|consen 132 KEFWDFSWHEMGTYDLPAMI-DYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFPKHIKSL-LN 209 (403)
T ss_pred cceeecchhhhhhcCHHHHH-HHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhhcccccH-HH
Confidence 1233443 33455 677788888999999999999999999988876 79999999998855311111 11
Q ss_pred HHHHhh----------cCC-CCCchhhhhhhhHHHHHH---HhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccc
Q 012188 300 YVMRKV----------APR-RVWPLIAFGASMACWYEH---ISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCH 365 (468)
Q Consensus 300 ~~~~~~----------~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (468)
...... -.. ...+...+...+...... +...++..+.....-++. ..+.......+. ...-..
T Consensus 210 ~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~--~~~n~~~~~~~~-~h~pag 286 (403)
T KOG2624|consen 210 KFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNS--NNWNTTLLPVYL-AHLPAG 286 (403)
T ss_pred HhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcch--Hhhhhcccchhh-ccCCCC
Confidence 111111 000 011111100000000000 111111100000000000 000000000000 000000
Q ss_pred cchhHHhhHhHHHhcc-ccccc-------------chHHHhhccCCCcEEEEeeCCCCccChhhHHHHHHhCCCCeEEE-
Q 012188 366 THNAAWHTLHNIICGT-ANKLD-------------GYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKV- 430 (468)
Q Consensus 366 ~~~~~~~~~~~~~~~~-~~~~~-------------~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~~~l~~- 430 (468)
........+..+.... ....+ .-.+..+.++++|+.+++|++|.++.++....+....+++....
T Consensus 287 tSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~DV~~~~~~~~~~~~~~~ 366 (403)
T KOG2624|consen 287 TSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPEDVLILLLVLPNSVIKYI 366 (403)
T ss_pred ccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHHHHHHHHHhccccccccc
Confidence 1111111121111110 00000 00112235779999999999999999999998888888765433
Q ss_pred --ecCCCcccccc--CcHHHHHHHHHHHHhhcC
Q 012188 431 --IEKKDHITIVV--GRQKTFARELEEIWRSSS 459 (468)
Q Consensus 431 --i~~~gH~~~~~--e~p~~~~~~i~~fl~~~~ 459 (468)
+++-.|+-++. +-++++.+.|.+.++...
T Consensus 367 ~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 367 VPIPEYNHLDFIWGLDAKEEVYDPVIERLRLFE 399 (403)
T ss_pred ccCCCccceeeeeccCcHHHHHHHHHHHHHhhh
Confidence 78899987763 458999999998887543
|
|
| >PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.6e-09 Score=113.89 Aligned_cols=79 Identities=10% Similarity=0.014 Sum_probs=59.1
Q ss_pred CCcceEEEECCCCCCCCCCCCCC--CCCHHHHHHHHHHHHhccc----------------CCceEEEEEEcccHHHHHHH
Q 012188 209 KSTYRLFAIDLLGFGRSPKPTDS--LYTVREHLDMIEKSVIEPN----------------KVKSFHIVAHSLGCILALAL 270 (468)
Q Consensus 209 ~~gy~Via~D~~G~G~S~~~~~~--~~t~~~~~~di~~~l~~~l----------------~~~~i~lvGhS~Gg~ial~~ 270 (468)
++||.|+..|.||.|.|++.... ....++..+.| ..+..+. -..+|.++|.||||.+++.+
T Consensus 277 ~rGYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vI-eWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~~~a 355 (767)
T PRK05371 277 PRGFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVI-DWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTLPNAV 355 (767)
T ss_pred hCCeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHH-HHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHHHHHH
Confidence 58999999999999999876431 12233333334 3444221 13699999999999999999
Q ss_pred HHhCCCccceEEEecCCC
Q 012188 271 AVKHPGSVKSLTLLAPPY 288 (468)
Q Consensus 271 a~~~p~~v~~lVl~~p~~ 288 (468)
|...|..++++|..++..
T Consensus 356 Aa~~pp~LkAIVp~a~is 373 (767)
T PRK05371 356 ATTGVEGLETIIPEAAIS 373 (767)
T ss_pred HhhCCCcceEEEeeCCCC
Confidence 999999999999988764
|
|
| >PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.11 E-value=4.4e-10 Score=102.18 Aligned_cols=100 Identities=14% Similarity=0.154 Sum_probs=64.2
Q ss_pred EEEEecCCCC---ccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcc-----cCCceE
Q 012188 184 TLFVKTQGPS---AFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEP-----NKVKSF 255 (468)
Q Consensus 184 vl~lHG~g~s---~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~-----l~~~~i 255 (468)
||++||++.. ..+...+...++ .+.|+.|+.+|+|=..+... ...++|..+.+ +.+++. .+.+++
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la--~~~g~~v~~~~Yrl~p~~~~----p~~~~D~~~a~-~~l~~~~~~~~~d~~~i 73 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLA--AERGFVVVSIDYRLAPEAPF----PAALEDVKAAY-RWLLKNADKLGIDPERI 73 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHH--HHHTSEEEEEE---TTTSST----THHHHHHHHHH-HHHHHTHHHHTEEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHH--hhccEEEEEeeccccccccc----cccccccccce-eeeccccccccccccce
Confidence 7999998762 233333444444 12699999999996432221 12455555555 566766 555799
Q ss_pred EEEEEcccHHHHHHHHHhCCC----ccceEEEecCCCCC
Q 012188 256 HIVAHSLGCILALALAVKHPG----SVKSLTLLAPPYYP 290 (468)
Q Consensus 256 ~lvGhS~Gg~ial~~a~~~p~----~v~~lVl~~p~~~~ 290 (468)
+|+|+|.||.+++.++.+..+ .++++++++|....
T Consensus 74 ~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 74 VLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred EEeecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 999999999999999976433 48999999986543
|
; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A .... |
| >COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.08 E-value=8.2e-09 Score=86.95 Aligned_cols=173 Identities=18% Similarity=0.203 Sum_probs=114.6
Q ss_pred CeEEEEecCCCCc--cchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceEEEEE
Q 012188 182 RDTLFVKTQGPSA--FWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVA 259 (468)
Q Consensus 182 p~vl~lHG~g~s~--~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i~lvG 259 (468)
+.+|++||+.+|. .|.......+. . +-.+++.- -..-..+|+++.+++++ ... .++++||+
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~-----~--a~rveq~~--------w~~P~~~dWi~~l~~~v-~a~-~~~~vlVA 65 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALP-----N--ARRVEQDD--------WEAPVLDDWIARLEKEV-NAA-EGPVVLVA 65 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCc-----c--chhcccCC--------CCCCCHHHHHHHHHHHH-hcc-CCCeEEEE
Confidence 4689999987654 36554444443 1 23333321 12347889998885443 333 35699999
Q ss_pred EcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHHhhccc
Q 012188 260 HSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKNH 339 (468)
Q Consensus 260 hS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (468)
||+||.+++.++.+....|+|+++++|+-...+... ....
T Consensus 66 HSLGc~~v~h~~~~~~~~V~GalLVAppd~~~~~~~---~~~~------------------------------------- 105 (181)
T COG3545 66 HSLGCATVAHWAEHIQRQVAGALLVAPPDVSRPEIR---PKHL------------------------------------- 105 (181)
T ss_pred ecccHHHHHHHHHhhhhccceEEEecCCCccccccc---hhhc-------------------------------------
Confidence 999999999999988889999999998754322110 0000
Q ss_pred hhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChhhHHHH
Q 012188 340 RVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNV 419 (468)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l 419 (468)
..+.... .....-|.+++..++|++++++.++.+
T Consensus 106 -------------------------------------------~tf~~~p---~~~lpfps~vvaSrnDp~~~~~~a~~~ 139 (181)
T COG3545 106 -------------------------------------------MTFDPIP---REPLPFPSVVVASRNDPYVSYEHAEDL 139 (181)
T ss_pred -------------------------------------------cccCCCc---cccCCCceeEEEecCCCCCCHHHHHHH
Confidence 0000000 134467999999999999999999999
Q ss_pred HHhCCCCeEEEecCCCcccccc--CcHHHHHHHHHHHHhhc
Q 012188 420 QRKIPRARVKVIEKKDHITIVV--GRQKTFARELEEIWRSS 458 (468)
Q Consensus 420 ~~~~p~~~l~~i~~~gH~~~~~--e~p~~~~~~i~~fl~~~ 458 (468)
++.+ ++.++.+..+||+..-. +.-.+....+.+|+.+.
T Consensus 140 a~~w-gs~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~~ 179 (181)
T COG3545 140 ANAW-GSALVDVGEGGHINAESGFGPWPEGYALLAQLLSRA 179 (181)
T ss_pred HHhc-cHhheecccccccchhhcCCCcHHHHHHHHHHhhhh
Confidence 9998 56778888889976521 23356667777776543
|
|
| >PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=99.05 E-value=2.9e-09 Score=97.15 Aligned_cols=105 Identities=22% Similarity=0.292 Sum_probs=73.8
Q ss_pred CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhccc------CCc
Q 012188 180 SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPN------KVK 253 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l------~~~ 253 (468)
.=|++||+||+.....|+..++..++ +.||.|+++|+...+..... .......+.++.+...+...+ +..
T Consensus 16 ~yPVv~f~~G~~~~~s~Ys~ll~hvA---ShGyIVV~~d~~~~~~~~~~-~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s 91 (259)
T PF12740_consen 16 TYPVVLFLHGFLLINSWYSQLLEHVA---SHGYIVVAPDLYSIGGPDDT-DEVASAAEVIDWLAKGLESKLPLGVKPDFS 91 (259)
T ss_pred CcCEEEEeCCcCCCHHHHHHHHHHHH---hCceEEEEecccccCCCCcc-hhHHHHHHHHHHHHhcchhhcccccccccc
Confidence 34899999999987778888888877 79999999997664331111 111223333333221122222 345
Q ss_pred eEEEEEEcccHHHHHHHHHhC-----CCccceEEEecCCC
Q 012188 254 SFHIVAHSLGCILALALAVKH-----PGSVKSLTLLAPPY 288 (468)
Q Consensus 254 ~i~lvGhS~Gg~ial~~a~~~-----p~~v~~lVl~~p~~ 288 (468)
++.|.|||-||-+|..++..+ +.+++++|+++|.-
T Consensus 92 ~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 92 KLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred ceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 899999999999999999988 56899999999875
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family | Back alignment and domain information |
|---|
Probab=99.03 E-value=9.5e-10 Score=115.19 Aligned_cols=89 Identities=11% Similarity=0.026 Sum_probs=68.4
Q ss_pred CCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCC---------CC--CC-----------CCHHHH
Q 012188 181 SRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKP---------TD--SL-----------YTVREH 238 (468)
Q Consensus 181 ~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~---------~~--~~-----------~t~~~~ 238 (468)
.|+|||+||+++....|..+.+.|. ++||+|+++|+||||+|... .. .. ..+++.
T Consensus 449 ~P~VVllHG~~g~~~~~~~lA~~La---~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~ 525 (792)
T TIGR03502 449 WPVVIYQHGITGAKENALAFAGTLA---AAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQS 525 (792)
T ss_pred CcEEEEeCCCCCCHHHHHHHHHHHH---hCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHH
Confidence 3689999999887765556777775 47999999999999999433 11 11 267888
Q ss_pred HHHHHHHHhcccC----------------CceEEEEEEcccHHHHHHHHHh
Q 012188 239 LDMIEKSVIEPNK----------------VKSFHIVAHSLGCILALALAVK 273 (468)
Q Consensus 239 ~~di~~~l~~~l~----------------~~~i~lvGhS~Gg~ial~~a~~ 273 (468)
+.|+ ..++..++ ..+++++||||||+++..++..
T Consensus 526 v~Dl-l~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 526 ILDL-LGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHH-HHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 8888 45554443 3589999999999999999975
|
Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae |
| >COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.1e-08 Score=97.87 Aligned_cols=258 Identities=18% Similarity=0.210 Sum_probs=138.3
Q ss_pred CCeEEEEecCCCCccch-----hhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHH-----HHHHHHHhccc
Q 012188 181 SRDTLFVKTQGPSAFWT-----ETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHL-----DMIEKSVIEPN 250 (468)
Q Consensus 181 ~p~vl~lHG~g~s~~~~-----~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~-----~di~~~l~~~l 250 (468)
++|+|++|-+-...+.. ..++..+ +++|..|+.+++++=..+.+ ..++++++ +.+ ..+.+..
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l---~~~g~~vfvIsw~nPd~~~~----~~~~edYi~e~l~~ai-d~v~~it 178 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEKSLVRWL---LEQGLDVFVISWRNPDASLA----AKNLEDYILEGLSEAI-DTVKDIT 178 (445)
T ss_pred CCceEeeccccCceeEEeCCCCccHHHHH---HHcCCceEEEeccCchHhhh----hccHHHHHHHHHHHHH-HHHHHHh
Confidence 57899999876533311 1123333 36999999999998655544 23555555 555 5778888
Q ss_pred CCceEEEEEEcccHHHHHHHHHhCCCc-cceEEEecCCCCCCCCCchh-------hHHHHHhhcCCCCCchhhhhhhhHH
Q 012188 251 KVKSFHIVAHSLGCILALALAVKHPGS-VKSLTLLAPPYYPVPKGAQA-------SQYVMRKVAPRRVWPLIAFGASMAC 322 (468)
Q Consensus 251 ~~~~i~lvGhS~Gg~ial~~a~~~p~~-v~~lVl~~p~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (468)
|.+++.++|+|.||.++..+++.++.+ |++++++..+.+........ ...+...+......+... +.
T Consensus 179 g~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lpg~~----ma- 253 (445)
T COG3243 179 GQKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILPGWY----MA- 253 (445)
T ss_pred CccccceeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhhhhccCCChHH----HH-
Confidence 999999999999999999999999987 99999998776654332211 111111111111111111 00
Q ss_pred HHHHHhhHHHHHhhccchhHHHHHHHHh-hhHHHHHhhhcccccc----chhHHhhHhHHHhcc-----cccccchHHHh
Q 012188 323 WYEHISRTICLLICKNHRVWEFLAKLVT-RNRIRTFLLEGFFCHT----HNAAWHTLHNIICGT-----ANKLDGYLDAV 392 (468)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 392 (468)
.....+..+...|......+. .+.-..+-...+..+. ....-..+++.+... .-..... .-.
T Consensus 254 -------~~F~mLrpndliw~~fV~nyl~ge~pl~fdllyWn~dst~~~~~~~~~~Lrn~y~~N~l~~g~~~v~G~-~Vd 325 (445)
T COG3243 254 -------IVFFLLRPNDLIWNYFVNNYLDGEQPLPFDLLYWNADSTRLPGAAHSEYLRNFYLENRLIRGGLEVSGT-MVD 325 (445)
T ss_pred -------HHHHhcCccccchHHHHHHhcCCCCCCchhHHHhhCCCccCchHHHHHHHHHHHHhChhhccceEECCE-Eec
Confidence 011111111112221111111 1100000000000000 000111111221111 0011111 112
Q ss_pred hccCCCcEEEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHH--------HHHHHHHHHhhcC
Q 012188 393 RNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKT--------FARELEEIWRSSS 459 (468)
Q Consensus 393 ~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~--------~~~~i~~fl~~~~ 459 (468)
+.+|+||++++.|++|.++|.+......+.+++-...++-++||.......|.. .-.....|+....
T Consensus 326 L~~It~pvy~~a~~~DhI~P~~Sv~~g~~l~~g~~~f~l~~sGHIa~vVN~p~~~k~~~w~n~~~~~~~Wl~~a~ 400 (445)
T COG3243 326 LGDITCPVYNLAAEEDHIAPWSSVYLGARLLGGEVTFVLSRSGHIAGVVNPPGNAKYQYWTNLPADAEAWLSGAK 400 (445)
T ss_pred hhhcccceEEEeecccccCCHHHHHHHHHhcCCceEEEEecCceEEEEeCCcchhhhhcCCCCcchHHHHHHhhc
Confidence 468999999999999999999999999999988444444558998776332221 1225667776543
|
|
| >KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.02 E-value=3.5e-09 Score=104.88 Aligned_cols=208 Identities=13% Similarity=0.096 Sum_probs=131.0
Q ss_pred CCCeEEEEecCCCCc----cchhhhhhhccccCCCcceEEEECCCCCCCCCC-------CCCCCCCHHHHHHHHHHHHhc
Q 012188 180 SSRDTLFVKTQGPSA----FWTETLFPNFSSASKSTYRLFAIDLLGFGRSPK-------PTDSLYTVREHLDMIEKSVIE 248 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~----~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~-------~~~~~~t~~~~~~di~~~l~~ 248 (468)
.-|+++++-|+++-. .|.....-.+..+++.||.|+.+|-||.-.... ..-+...++|.++.+ +.+.+
T Consensus 641 kYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVegl-q~Lae 719 (867)
T KOG2281|consen 641 KYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGL-QMLAE 719 (867)
T ss_pred CCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHH-HHHHH
Confidence 348999999999821 111111111222335899999999999544321 112456889999999 78888
Q ss_pred ccC---CceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHH
Q 012188 249 PNK---VKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYE 325 (468)
Q Consensus 249 ~l~---~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (468)
+.| .+++.+-|||+||++++....+||+.++..|.-+|+.....-...-....+. .|
T Consensus 720 q~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~~YDTgYTERYMg-------~P------------- 779 (867)
T KOG2281|consen 720 QTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWRLYDTGYTERYMG-------YP------------- 779 (867)
T ss_pred hcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeeeeecccchhhhcC-------CC-------------
Confidence 875 4799999999999999999999999998888877665331111000000000 00
Q ss_pred HHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEee
Q 012188 326 HISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHG 405 (468)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G 405 (468)
+ +.-..+.. ......... +..-.-..|++||
T Consensus 780 -----------------~--------~nE~gY~a-----------------------gSV~~~Vek-lpdepnRLlLvHG 810 (867)
T KOG2281|consen 780 -----------------D--------NNEHGYGA-----------------------GSVAGHVEK-LPDEPNRLLLVHG 810 (867)
T ss_pred -----------------c--------cchhcccc-----------------------hhHHHHHhh-CCCCCceEEEEec
Confidence 0 00000000 000000111 1111345899999
Q ss_pred CCCCccChhhHHHHHHhC----CCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 406 EDDELIPVECSYNVQRKI----PRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 406 ~~D~~vp~~~~~~l~~~~----p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
--|..|-......+...+ +.-++.++|+.-|.+=..+...-+...+..|+++
T Consensus 811 liDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 811 LIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred ccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 999999888766665544 3459999999999987766777788889999875
|
|
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.1e-08 Score=117.85 Aligned_cols=100 Identities=15% Similarity=0.160 Sum_probs=82.1
Q ss_pred CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccC-CceEEEE
Q 012188 180 SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNK-VKSFHIV 258 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~-~~~i~lv 258 (468)
++++++++||++++...|..+.+.|. .+++|+++|++|+|.+.. ..++++++++++ ...++.+. ..+++++
T Consensus 1067 ~~~~l~~lh~~~g~~~~~~~l~~~l~----~~~~v~~~~~~g~~~~~~---~~~~l~~la~~~-~~~i~~~~~~~p~~l~ 1138 (1296)
T PRK10252 1067 DGPTLFCFHPASGFAWQFSVLSRYLD----PQWSIYGIQSPRPDGPMQ---TATSLDEVCEAH-LATLLEQQPHGPYHLL 1138 (1296)
T ss_pred CCCCeEEecCCCCchHHHHHHHHhcC----CCCcEEEEECCCCCCCCC---CCCCHHHHHHHH-HHHHHhhCCCCCEEEE
Confidence 45789999999887776667778776 789999999999986632 247999999998 46665544 3589999
Q ss_pred EEcccHHHHHHHHHh---CCCccceEEEecCC
Q 012188 259 AHSLGCILALALAVK---HPGSVKSLTLLAPP 287 (468)
Q Consensus 259 GhS~Gg~ial~~a~~---~p~~v~~lVl~~p~ 287 (468)
||||||.+|..+|.+ .++++..++++++.
T Consensus 1139 G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1139 GYSLGGTLAQGIAARLRARGEEVAFLGLLDTW 1170 (1296)
T ss_pred EechhhHHHHHHHHHHHHcCCceeEEEEecCC
Confidence 999999999999986 57889999999863
|
|
| >PF10503 Esterase_phd: Esterase PHB depolymerase | Back alignment and domain information |
|---|
Probab=99.01 E-value=9.4e-09 Score=92.60 Aligned_cols=108 Identities=11% Similarity=0.051 Sum_probs=69.4
Q ss_pred CCCeEEEEecCCCCccchhhh--hhhccccCCCcceEEEECCCCCCCC-------CCCC-CCCCCHHHHHHHHHHHHhcc
Q 012188 180 SSRDTLFVKTQGPSAFWTETL--FPNFSSASKSTYRLFAIDLLGFGRS-------PKPT-DSLYTVREHLDMIEKSVIEP 249 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~~~~--~~~L~~~~~~gy~Via~D~~G~G~S-------~~~~-~~~~t~~~~~~di~~~l~~~ 249 (468)
+.|.||++||.+++...+... +..++ -+.||-|+.|+....... .... ....+...+.+.+ +.+..+
T Consensus 15 ~~PLVv~LHG~~~~a~~~~~~s~~~~lA--d~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv-~~v~~~ 91 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAEDFAAGSGWNALA--DREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALV-DYVAAR 91 (220)
T ss_pred CCCEEEEeCCCCCCHHHHHhhcCHHHHh--hcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHH-HhHhhh
Confidence 347899999988865432211 12232 237899999986431111 0000 0111222233333 566666
Q ss_pred cCC--ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCC
Q 012188 250 NKV--KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 250 l~~--~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~ 290 (468)
+++ .+|++.|+|.||.++..++..||+.|.++..+++....
T Consensus 92 ~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~ 134 (220)
T PF10503_consen 92 YNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYG 134 (220)
T ss_pred cccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccccc
Confidence 665 48999999999999999999999999999998876543
|
|
| >PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases | Back alignment and domain information |
|---|
Probab=98.99 E-value=7.9e-08 Score=85.04 Aligned_cols=210 Identities=12% Similarity=0.098 Sum_probs=102.3
Q ss_pred CCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCC-CCCCCCCCCCCCHHHHHHHHH--HHHhcccCCceEEE
Q 012188 181 SRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGF-GRSPKPTDSLYTVREHLDMIE--KSVIEPNKVKSFHI 257 (468)
Q Consensus 181 ~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~-G~S~~~~~~~~t~~~~~~di~--~~l~~~l~~~~i~l 257 (468)
+++||+..|++....-+..+..+|+ ..||+|+.||...| |.|++.-. .+++....+++. -..++..|..++.|
T Consensus 30 ~~tiliA~Gf~rrmdh~agLA~YL~---~NGFhViRyDsl~HvGlSsG~I~-eftms~g~~sL~~V~dwl~~~g~~~~GL 105 (294)
T PF02273_consen 30 NNTILIAPGFARRMDHFAGLAEYLS---ANGFHVIRYDSLNHVGLSSGDIN-EFTMSIGKASLLTVIDWLATRGIRRIGL 105 (294)
T ss_dssp S-EEEEE-TT-GGGGGGHHHHHHHH---TTT--EEEE---B--------------HHHHHHHHHHHHHHHHHTT---EEE
T ss_pred CCeEEEecchhHHHHHHHHHHHHHh---hCCeEEEeccccccccCCCCChh-hcchHHhHHHHHHHHHHHHhcCCCcchh
Confidence 5899999999987666666777777 69999999998876 89987764 578877666662 23445778899999
Q ss_pred EEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHHhhc
Q 012188 258 VAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICK 337 (468)
Q Consensus 258 vGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (468)
++.|+.|-+|+..|.+- .+.-+|..-+.... +.-+.+..... .+..+.+.+...+.
T Consensus 106 IAaSLSaRIAy~Va~~i--~lsfLitaVGVVnl--------r~TLe~al~~D---------yl~~~i~~lp~dld----- 161 (294)
T PF02273_consen 106 IAASLSARIAYEVAADI--NLSFLITAVGVVNL--------RDTLEKALGYD---------YLQLPIEQLPEDLD----- 161 (294)
T ss_dssp EEETTHHHHHHHHTTTS----SEEEEES--S-H--------HHHHHHHHSS----------GGGS-GGG--SEEE-----
T ss_pred hhhhhhHHHHHHHhhcc--CcceEEEEeeeeeH--------HHHHHHHhccc---------hhhcchhhCCCccc-----
Confidence 99999999999999853 46777766654422 22221111100 00000000000000
Q ss_pred cchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChhhHH
Q 012188 338 NHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSY 417 (468)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~ 417 (468)
+++ ..-..-..+...+.......+....+ .+.+.+|++.+++++|.+|......
T Consensus 162 ---------------------feG----h~l~~~vFv~dc~e~~w~~l~ST~~~-~k~l~iP~iaF~A~~D~WV~q~eV~ 215 (294)
T PF02273_consen 162 ---------------------FEG----HNLGAEVFVTDCFEHGWDDLDSTIND-MKRLSIPFIAFTANDDDWVKQSEVE 215 (294)
T ss_dssp ---------------------ETT----EEEEHHHHHHHHHHTT-SSHHHHHHH-HTT--S-EEEEEETT-TTS-HHHHH
T ss_pred ---------------------ccc----cccchHHHHHHHHHcCCccchhHHHH-HhhCCCCEEEEEeCCCccccHHHHH
Confidence 000 00000011122222222222222222 3677999999999999999998888
Q ss_pred HHHHhC--CCCeEEEecCCCccccccCcHHH
Q 012188 418 NVQRKI--PRARVKVIEKKDHITIVVGRQKT 446 (468)
Q Consensus 418 ~l~~~~--p~~~l~~i~~~gH~~~~~e~p~~ 446 (468)
++...+ +..+++.++|++|-.- |++..
T Consensus 216 ~~~~~~~s~~~klysl~Gs~HdL~--enl~v 244 (294)
T PF02273_consen 216 ELLDNINSNKCKLYSLPGSSHDLG--ENLVV 244 (294)
T ss_dssp HHHTT-TT--EEEEEETT-SS-TT--SSHHH
T ss_pred HHHHhcCCCceeEEEecCccchhh--hChHH
Confidence 888866 4578999999999875 67643
|
Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B. |
| >PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.99 E-value=1e-08 Score=94.59 Aligned_cols=206 Identities=14% Similarity=0.184 Sum_probs=112.5
Q ss_pred CCCeEEEEecCCCCccchhhhhhhcc--ccCCCcceEEEECCCCC----CCCC----CCC-----CCC--CCHHHHHHHH
Q 012188 180 SSRDTLFVKTQGPSAFWTETLFPNFS--SASKSTYRLFAIDLLGF----GRSP----KPT-----DSL--YTVREHLDMI 242 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~~~~~~~L~--~~~~~gy~Via~D~~G~----G~S~----~~~-----~~~--~t~~~~~~di 242 (468)
+..|.||+||++++..-+..++..+. .-..+..-++-++--|+ |.=. .|- ... -+....++.+
T Consensus 10 ~~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl 89 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWL 89 (255)
T ss_dssp S-EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHH
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHH
Confidence 34589999999998776667777774 21222233344444441 2211 110 111 2344444444
Q ss_pred ---HHHHhcccCCceEEEEEEcccHHHHHHHHHhCCC-----ccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchh
Q 012188 243 ---EKSVIEPNKVKSFHIVAHSLGCILALALAVKHPG-----SVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLI 314 (468)
Q Consensus 243 ---~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~-----~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (468)
...+.++++++++.+|||||||..++.++..+.. .+.++|.+++|+.......... ....+.... |
T Consensus 90 ~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~--~~~~~~~~g--p-- 163 (255)
T PF06028_consen 90 KKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQ--NQNDLNKNG--P-- 163 (255)
T ss_dssp HHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-T--TTT-CSTT---B--
T ss_pred HHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccc--hhhhhcccC--C--
Confidence 2456678899999999999999999999988643 5899999999876532221000 000000000 0
Q ss_pred hhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhc
Q 012188 315 AFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRN 394 (468)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (468)
.... ..+..++. ..+.. -
T Consensus 164 ---~~~~------------------------------~~y~~l~~----------------------------~~~~~-~ 181 (255)
T PF06028_consen 164 ---KSMT------------------------------PMYQDLLK----------------------------NRRKN-F 181 (255)
T ss_dssp ---SS--------------------------------HHHHHHHH----------------------------THGGG-S
T ss_pred ---cccC------------------------------HHHHHHHH----------------------------HHHhh-C
Confidence 0000 00000000 00000 1
Q ss_pred cCCCcEEEEeeC------CCCccChhhHHHHHHhCCC----CeEEEecC--CCccccccCcHHHHHHHHHHHH
Q 012188 395 HVKCDVNVFHGE------DDELIPVECSYNVQRKIPR----ARVKVIEK--KDHITIVVGRQKTFARELEEIW 455 (468)
Q Consensus 395 ~i~~PvLii~G~------~D~~vp~~~~~~l~~~~p~----~~l~~i~~--~gH~~~~~e~p~~~~~~i~~fl 455 (468)
.-++.||-|.|. .|..||...+..+...+++ -+-.++.| +.|.-.. |++ ++.+.|.+||
T Consensus 182 p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~Lh-eN~-~V~~~I~~FL 252 (255)
T PF06028_consen 182 PKNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLH-ENP-QVDKLIIQFL 252 (255)
T ss_dssp TTT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGG-CCH-HHHHHHHHHH
T ss_pred CCCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECCCCccccCC-CCH-HHHHHHHHHh
Confidence 126789999999 8999999999888887754 24455554 6899886 665 6778898887
|
; PDB: 3LP5_A 3FLE_A 3DS8_A. |
| >KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.2e-08 Score=108.69 Aligned_cols=202 Identities=17% Similarity=0.158 Sum_probs=127.5
Q ss_pred CeEEEEecCCCCccchh----hhhhhccccCCCcceEEEECCCCCCCCCCC------CC-CCCCHHHHHHHHHHHHhccc
Q 012188 182 RDTLFVKTQGPSAFWTE----TLFPNFSSASKSTYRLFAIDLLGFGRSPKP------TD-SLYTVREHLDMIEKSVIEPN 250 (468)
Q Consensus 182 p~vl~lHG~g~s~~~~~----~~~~~L~~~~~~gy~Via~D~~G~G~S~~~------~~-~~~t~~~~~~di~~~l~~~l 250 (468)
|.++.+||++++..+.. .+...+. ...|+.|+.+|.||-|..... .. +...++|....+ ..+++..
T Consensus 527 Pllv~~yGGP~sq~v~~~~~~~~~~~~~--s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~-~~~~~~~ 603 (755)
T KOG2100|consen 527 PLLVVVYGGPGSQSVTSKFSVDWNEVVV--SSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAV-KKVLKLP 603 (755)
T ss_pred CEEEEecCCCCcceeeeeEEecHHHHhh--ccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHH-HHHHhcc
Confidence 66788888886322111 1111111 247999999999997665321 11 456788888888 5777664
Q ss_pred --CCceEEEEEEcccHHHHHHHHHhCC-CccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHH
Q 012188 251 --KVKSFHIVAHSLGCILALALAVKHP-GSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHI 327 (468)
Q Consensus 251 --~~~~i~lvGhS~Gg~ial~~a~~~p-~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (468)
+.+++.|.|+|+||++++.++...| +.++..+.++|+....-.......+ .+. ++..
T Consensus 604 ~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~~yds~~ter---ymg----~p~~------------- 663 (755)
T KOG2100|consen 604 FIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWLYYDSTYTER---YMG----LPSE------------- 663 (755)
T ss_pred cccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeeeeecccccHh---hcC----CCcc-------------
Confidence 3468999999999999999999998 4566669999887542111000000 000 0000
Q ss_pred hhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcE-EEEeeC
Q 012188 328 SRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDV-NVFHGE 406 (468)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pv-Lii~G~ 406 (468)
....+ . +.........++.|. |++||+
T Consensus 664 -------------------------~~~~y--~-------------------------e~~~~~~~~~~~~~~~LliHGt 691 (755)
T KOG2100|consen 664 -------------------------NDKGY--E-------------------------ESSVSSPANNIKTPKLLLIHGT 691 (755)
T ss_pred -------------------------ccchh--h-------------------------hccccchhhhhccCCEEEEEcC
Confidence 00000 0 000011123444554 999999
Q ss_pred CCCccChhhHHHHHHhCC----CCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 407 DDELIPVECSYNVQRKIP----RARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 407 ~D~~vp~~~~~~l~~~~p----~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
.|..|+.+++..+.+.+. ..++.++|+.+|.....+.-..+...+..|+...
T Consensus 692 ~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~ 747 (755)
T KOG2100|consen 692 EDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDRFLRDC 747 (755)
T ss_pred CcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHHHHHHH
Confidence 999999999888887663 2589999999999875333377888999999843
|
|
| >PRK04940 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=9.7e-08 Score=82.30 Aligned_cols=53 Identities=9% Similarity=0.041 Sum_probs=41.0
Q ss_pred cEEEEeeCCCCccChhhHHHHHHhCCCC-eEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 399 DVNVFHGEDDELIPVECSYNVQRKIPRA-RVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 399 PvLii~G~~D~~vp~~~~~~l~~~~p~~-~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
..+++..+.|.+.+...+.+.. .++ ++.+.+|++|.. ..-+.....|.+|+..
T Consensus 126 r~~vllq~gDEvLDyr~a~~~y---~~~y~~~v~~GGdH~f---~~fe~~l~~I~~F~~~ 179 (180)
T PRK04940 126 RCLVILSRNDEVLDSQRTAEEL---HPYYEIVWDEEQTHKF---KNISPHLQRIKAFKTL 179 (180)
T ss_pred cEEEEEeCCCcccCHHHHHHHh---ccCceEEEECCCCCCC---CCHHHHHHHHHHHHhc
Confidence 3689999999999877655444 455 688999988875 4667788999999854
|
|
| >KOG3975 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.90 E-value=6e-08 Score=85.83 Aligned_cols=255 Identities=13% Similarity=0.168 Sum_probs=136.6
Q ss_pred CCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCC---C-----CCCCCCCHHHHHHHHHHHHhcc-
Q 012188 179 SSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSP---K-----PTDSLYTVREHLDMIEKSVIEP- 249 (468)
Q Consensus 179 ~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~---~-----~~~~~~t~~~~~~di~~~l~~~- 249 (468)
.+++.++.+.|.||...++..+...|-..+-+.+.++.+-..||-.-+ . .....+++++.++.-. ++++.
T Consensus 27 ~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKl-aFik~~ 105 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKL-AFIKEY 105 (301)
T ss_pred CCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHH-HHHHHh
Confidence 456788999999998887777777776444456779999888886543 1 1124567888887663 55544
Q ss_pred cCC-ceEEEEEEcccHHHHHHHHHhC--CCccceEEEecCCCCCCCCCchhh--HHHHHhhcCCCCCchhhhhhhhHHHH
Q 012188 250 NKV-KSFHIVAHSLGCILALALAVKH--PGSVKSLTLLAPPYYPVPKGAQAS--QYVMRKVAPRRVWPLIAFGASMACWY 324 (468)
Q Consensus 250 l~~-~~i~lvGhS~Gg~ial~~a~~~--p~~v~~lVl~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (468)
+.. .+++++|||.|+++.+.+.... --.|.+.+++-|..........+. ...+..+..........+-.....|.
T Consensus 106 ~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt~yi~~~~lp~~i 185 (301)
T KOG3975|consen 106 VPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLTSYIYWILLPGFI 185 (301)
T ss_pred CCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhheeeeeeeecChHHH
Confidence 433 5899999999999999988632 236888888877543211111100 00000000000000000000001110
Q ss_pred HHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhccccccc---chHHHhhccCCCcEE
Q 012188 325 EHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLD---GYLDAVRNHVKCDVN 401 (468)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~PvL 401 (468)
..+ +-.......... .+++..++ ...+. ..+.+......+.+. ....+..++-.+-+-
T Consensus 186 r~~---Li~~~l~~~n~p------------~e~l~tal-~l~h~---~v~rn~v~la~qEm~eV~~~d~e~~een~d~l~ 246 (301)
T KOG3975|consen 186 RFI---LIKFMLCGSNGP------------QEFLSTAL-FLTHP---QVVRNSVGLAAQEMEEVTTRDIEYCEENLDSLW 246 (301)
T ss_pred HHH---HHHHhcccCCCc------------HHHHhhHH-HhhcH---HHHHHHhhhchHHHHHHHHhHHHHHHhcCcEEE
Confidence 000 000000000000 00000000 00000 001111111111111 111223344467889
Q ss_pred EEeeCCCCccChhhHHHHHHhCCCC--eEEEecCCCccccccCcHHHHHHHHHHHH
Q 012188 402 VFHGEDDELIPVECSYNVQRKIPRA--RVKVIEKKDHITIVVGRQKTFARELEEIW 455 (468)
Q Consensus 402 ii~G~~D~~vp~~~~~~l~~~~p~~--~l~~i~~~gH~~~~~e~p~~~~~~i~~fl 455 (468)
+.+|..|.++|.+....+.+.+|.. ++-+ ++..|.... ...+..++.+.+.+
T Consensus 247 Fyygt~DgW~p~~~~d~~kdd~~eed~~Lde-dki~HAFV~-~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 247 FYYGTNDGWVPSHYYDYYKDDVPEEDLKLDE-DKIPHAFVV-KHAQYMANAVFDMI 300 (301)
T ss_pred EEccCCCCCcchHHHHHHhhhcchhceeecc-ccCCcceee-cccHHHHHHHHHhh
Confidence 9999999999999999999999865 4444 789999886 78888888887765
|
|
| >PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family | Back alignment and domain information |
|---|
Probab=98.88 E-value=3.4e-09 Score=96.15 Aligned_cols=165 Identities=21% Similarity=0.172 Sum_probs=89.2
Q ss_pred CCCeEEEEecCCCCccchhhhhhhccccCCC-cceEEEECCCC-----CCCCC------------CCC------C----C
Q 012188 180 SSRDTLFVKTQGPSAFWTETLFPNFSSASKS-TYRLFAIDLLG-----FGRSP------------KPT------D----S 231 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~-gy~Via~D~~G-----~G~S~------------~~~------~----~ 231 (468)
.++.||++||++.+...++.....|...+++ ++.++.+|-|- -|-.. .+. . .
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 4678999999999887666666666655556 89999988442 11111 010 0 1
Q ss_pred CCCHHHHHHHHHHHHhcccCCceEEEEEEcccHHHHHHHHHhC--------CCccceEEEecCCCCCCCCCchhhHHHHH
Q 012188 232 LYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKH--------PGSVKSLTLLAPPYYPVPKGAQASQYVMR 303 (468)
Q Consensus 232 ~~t~~~~~~di~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~--------p~~v~~lVl~~p~~~~~~~~~~~~~~~~~ 303 (468)
...+++-++.+ ...++..|. -..|+|+|.||.+|..++... ...++-+|++++.....+..
T Consensus 83 ~~~~~~sl~~l-~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~~--------- 151 (212)
T PF03959_consen 83 YEGLDESLDYL-RDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPDY--------- 151 (212)
T ss_dssp G---HHHHHHH-HHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-G---------
T ss_pred ccCHHHHHHHH-HHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchhh---------
Confidence 22345555555 355555442 357999999999999888642 12478888888654320000
Q ss_pred hhcCCCCCchhhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccc
Q 012188 304 KVAPRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTAN 383 (468)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (468)
T Consensus 152 -------------------------------------------------------------------------------- 151 (212)
T PF03959_consen 152 -------------------------------------------------------------------------------- 151 (212)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccchHHHhhccCCCcEEEEeeCCCCccChhhHHHHHHhCCC-CeEEEecCCCccccc
Q 012188 384 KLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPR-ARVKVIEKKDHITIV 440 (468)
Q Consensus 384 ~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~-~~l~~i~~~gH~~~~ 440 (468)
.... ....+++|+|.|+|++|.+++++.++.+.+.+.+ .+++..++ ||.+..
T Consensus 152 --~~~~--~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~~~v~~h~g-GH~vP~ 204 (212)
T PF03959_consen 152 --QELY--DEPKISIPTLHVIGENDPVVPPERSEALAEMFDPDARVIEHDG-GHHVPR 204 (212)
T ss_dssp --TTTT----TT---EEEEEEETT-SSS-HHHHHHHHHHHHHHEEEEEESS-SSS---
T ss_pred --hhhh--ccccCCCCeEEEEeCCCCCcchHHHHHHHHhccCCcEEEEECC-CCcCcC
Confidence 0000 0146789999999999999999999999998877 78888885 887764
|
It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A. |
| >KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.88 E-value=4.6e-08 Score=85.53 Aligned_cols=171 Identities=15% Similarity=0.176 Sum_probs=107.8
Q ss_pred eEEEEec-CCCCccchhhhhhhccccCCCcceEEEECCC-CCCCCCCCC-----------CCCCCHHHHHHHHHHHHhcc
Q 012188 183 DTLFVKT-QGPSAFWTETLFPNFSSASKSTYRLFAIDLL-GFGRSPKPT-----------DSLYTVREHLDMIEKSVIEP 249 (468)
Q Consensus 183 ~vl~lHG-~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~-G~G~S~~~~-----------~~~~t~~~~~~di~~~l~~~ 249 (468)
.||++.- +|....-.......++ ..||.|+.||+. |=-.|+... +......+...-+ ..+..+
T Consensus 41 ~li~i~DvfG~~~~n~r~~Adk~A---~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~-k~lk~~ 116 (242)
T KOG3043|consen 41 VLIVIQDVFGFQFPNTREGADKVA---LNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVV-KWLKNH 116 (242)
T ss_pred EEEEEEeeeccccHHHHHHHHHHh---cCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHH-HHHHHc
Confidence 5556655 4433222333455554 479999999964 422221100 0112233333333 233333
Q ss_pred cCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhh
Q 012188 250 NKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISR 329 (468)
Q Consensus 250 l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (468)
-..+++.++|.+|||-++..+....| .+.+.+..-|....
T Consensus 117 g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~d--------------------------------------- 156 (242)
T KOG3043|consen 117 GDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFVD--------------------------------------- 156 (242)
T ss_pred CCcceeeEEEEeecceEEEEeeccch-hheeeeEecCCcCC---------------------------------------
Confidence 33689999999999999998888888 67777776554322
Q ss_pred HHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCC
Q 012188 330 TICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDE 409 (468)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~ 409 (468)
.+...++++|++++.|+.|.
T Consensus 157 ------------------------------------------------------------~~D~~~vk~Pilfl~ae~D~ 176 (242)
T KOG3043|consen 157 ------------------------------------------------------------SADIANVKAPILFLFAELDE 176 (242)
T ss_pred ------------------------------------------------------------hhHHhcCCCCEEEEeecccc
Confidence 00025668999999999999
Q ss_pred ccChhhHHHHHHhCC-----CCeEEEecCCCccccc----cCcH------HHHHHHHHHHHhh
Q 012188 410 LIPVECSYNVQRKIP-----RARVKVIEKKDHITIV----VGRQ------KTFARELEEIWRS 457 (468)
Q Consensus 410 ~vp~~~~~~l~~~~p-----~~~l~~i~~~gH~~~~----~e~p------~~~~~~i~~fl~~ 457 (468)
++|+.....+.+.+. +.++.+++|.+|..+. ...| ++..+.+..|++.
T Consensus 177 ~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~ 239 (242)
T KOG3043|consen 177 DVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKH 239 (242)
T ss_pred cCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHH
Confidence 999998888877764 2379999999998773 1233 3445566666653
|
|
| >PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.4e-08 Score=92.74 Aligned_cols=110 Identities=22% Similarity=0.221 Sum_probs=69.3
Q ss_pred CCCeEEEEecCCCCccchhhhhhhc-----cccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhccc----
Q 012188 180 SSRDTLFVKTQGPSAFWTETLFPNF-----SSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPN---- 250 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~~~~~~~L-----~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l---- 250 (468)
++.||||+||.+++....+.+...+ .......++++++|+......-... ....-.+++......+++.+
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~-~l~~q~~~~~~~i~~i~~~~~~~~ 81 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGR-TLQRQAEFLAEAIKYILELYKSNR 81 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccccc-cHHHHHHHHHHHHHHHHHhhhhcc
Confidence 4679999999887655333333222 1112246899999987743221111 11112222222224565555
Q ss_pred -CCceEEEEEEcccHHHHHHHHHhCC---CccceEEEecCCCCC
Q 012188 251 -KVKSFHIVAHSLGCILALALAVKHP---GSVKSLTLLAPPYYP 290 (468)
Q Consensus 251 -~~~~i~lvGhS~Gg~ial~~a~~~p---~~v~~lVl~~p~~~~ 290 (468)
+.+++++|||||||.+|..++...+ +.|+.+|.++.|...
T Consensus 82 ~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g 125 (225)
T PF07819_consen 82 PPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRG 125 (225)
T ss_pred CCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCC
Confidence 5679999999999999998876643 479999999988755
|
This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane |
| >KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.87 E-value=4.3e-09 Score=90.21 Aligned_cols=202 Identities=15% Similarity=0.183 Sum_probs=122.2
Q ss_pred ceeEEEecC--CCCeEEEEecCCC----CccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 012188 171 CKFCTCWSS--SSRDTLFVKTQGP----SAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEK 244 (468)
Q Consensus 171 ~~~~~~~~~--~~p~vl~lHG~g~----s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~ 244 (468)
....--|++ ..+..||+||+-. ....-...-+.+ +.||+|..++ +|.++....-..++.+..+-+ .
T Consensus 55 ~q~VDIwg~~~~~klfIfIHGGYW~~g~rk~clsiv~~a~----~~gY~vasvg---Y~l~~q~htL~qt~~~~~~gv-~ 126 (270)
T KOG4627|consen 55 RQLVDIWGSTNQAKLFIFIHGGYWQEGDRKMCLSIVGPAV----RRGYRVASVG---YNLCPQVHTLEQTMTQFTHGV-N 126 (270)
T ss_pred ceEEEEecCCCCccEEEEEecchhhcCchhcccchhhhhh----hcCeEEEEec---cCcCcccccHHHHHHHHHHHH-H
Confidence 445566753 4578899999632 112222233334 4899999974 555543321123455555556 5
Q ss_pred HHhcccCC-ceEEEEEEcccHHHHHHHHHh-CCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHH
Q 012188 245 SVIEPNKV-KSFHIVAHSLGCILALALAVK-HPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMAC 322 (468)
Q Consensus 245 ~l~~~l~~-~~i~lvGhS~Gg~ial~~a~~-~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (468)
.+++.... +.+.+-|||.|+.+|..+..+ +..+|.++++.++.+...+ +.....-..+.
T Consensus 127 filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~E------------L~~te~g~dlg------- 187 (270)
T KOG4627|consen 127 FILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRE------------LSNTESGNDLG------- 187 (270)
T ss_pred HHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHH------------HhCCccccccC-------
Confidence 66776654 457777999999999887765 3448999999887664310 00000000000
Q ss_pred HHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEE
Q 012188 323 WYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNV 402 (468)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLi 402 (468)
............+. .+..+++|+|+
T Consensus 188 ------------------------------------------------------Lt~~~ae~~Scdl~-~~~~v~~~ilV 212 (270)
T KOG4627|consen 188 ------------------------------------------------------LTERNAESVSCDLW-EYTDVTVWILV 212 (270)
T ss_pred ------------------------------------------------------cccchhhhcCccHH-HhcCceeeeeE
Confidence 00000000011111 13677899999
Q ss_pred EeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcH----HHHHHHHHHHH
Q 012188 403 FHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQ----KTFARELEEIW 455 (468)
Q Consensus 403 i~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p----~~~~~~i~~fl 455 (468)
+.|++|--.-.++.+.+......+++..++|.+|+..+ ++- ..+.+.+++|+
T Consensus 213 v~~~~espklieQnrdf~~q~~~a~~~~f~n~~hy~I~-~~~~~~~s~~~~~~~~~~ 268 (270)
T KOG4627|consen 213 VAAEHESPKLIEQNRDFADQLRKASFTLFKNYDHYDII-EETAIDDSDVSRFLRNIE 268 (270)
T ss_pred eeecccCcHHHHhhhhHHHHhhhcceeecCCcchhhHH-HHhccccchHHHHHHHHh
Confidence 99999987778899999999889999999999999887 332 33445555544
|
|
| >COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.84 E-value=3.3e-07 Score=84.32 Aligned_cols=101 Identities=15% Similarity=0.215 Sum_probs=82.6
Q ss_pred CeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceEEEEEEc
Q 012188 182 RDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHS 261 (468)
Q Consensus 182 p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i~lvGhS 261 (468)
||+.++|+.++....+..+...+. ....|+..+.||+|.-... ..+++++++.....+.+.-...+++|+|||
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~----~~~~v~~l~a~g~~~~~~~---~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S 73 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALG----PLLPVYGLQAPGYGAGEQP---FASLDDMAAAYVAAIRRVQPEGPYVLLGWS 73 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhc----cCceeeccccCcccccccc---cCCHHHHHHHHHHHHHHhCCCCCEEEEeec
Confidence 589999998887776666777777 7799999999999863332 358999998886667666677799999999
Q ss_pred ccHHHHHHHHHhC---CCccceEEEecCCCC
Q 012188 262 LGCILALALAVKH---PGSVKSLTLLAPPYY 289 (468)
Q Consensus 262 ~Gg~ial~~a~~~---p~~v~~lVl~~p~~~ 289 (468)
+||.+|...|.+. .+.|..+++++++..
T Consensus 74 ~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 74 LGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred cccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 9999999999763 457999999998765
|
|
| >COG0657 Aes Esterase/lipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.1e-07 Score=91.90 Aligned_cols=104 Identities=15% Similarity=0.141 Sum_probs=71.1
Q ss_pred CCCeEEEEecCCCC---ccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcc---cC--
Q 012188 180 SSRDTLFVKTQGPS---AFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEP---NK-- 251 (468)
Q Consensus 180 ~~p~vl~lHG~g~s---~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~---l~-- 251 (468)
+.|+||++||++.. ......+...+. ...|+.|+.+|+|---+-..+ ..++|..+.+ ..+.++ ++
T Consensus 78 ~~p~vly~HGGg~~~g~~~~~~~~~~~~~--~~~g~~vv~vdYrlaPe~~~p----~~~~d~~~a~-~~l~~~~~~~g~d 150 (312)
T COG0657 78 TAPVVLYLHGGGWVLGSLRTHDALVARLA--AAAGAVVVSVDYRLAPEHPFP----AALEDAYAAY-RWLRANAAELGID 150 (312)
T ss_pred CCcEEEEEeCCeeeecChhhhHHHHHHHH--HHcCCEEEecCCCCCCCCCCC----chHHHHHHHH-HHHHhhhHhhCCC
Confidence 46899999998762 222212333332 248999999999975444322 3556655555 455554 33
Q ss_pred CceEEEEEEcccHHHHHHHHHhCCC----ccceEEEecCCCCC
Q 012188 252 VKSFHIVAHSLGCILALALAVKHPG----SVKSLTLLAPPYYP 290 (468)
Q Consensus 252 ~~~i~lvGhS~Gg~ial~~a~~~p~----~v~~lVl~~p~~~~ 290 (468)
.+++.++|+|.||.+++.++..-.+ ...+.+++.|....
T Consensus 151 p~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~ 193 (312)
T COG0657 151 PSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDL 193 (312)
T ss_pred ccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCC
Confidence 4689999999999999998876543 47889999887655
|
|
| >PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases | Back alignment and domain information |
|---|
Probab=98.84 E-value=1e-07 Score=90.57 Aligned_cols=82 Identities=18% Similarity=0.139 Sum_probs=51.1
Q ss_pred ccCCCcceEEEECCCCCCCCCCCCC-CCCCHHHHHHHHHHHHhcccCC---ceEEEEEEcccHHHHHHHHHhC----CCc
Q 012188 206 SASKSTYRLFAIDLLGFGRSPKPTD-SLYTVREHLDMIEKSVIEPNKV---KSFHIVAHSLGCILALALAVKH----PGS 277 (468)
Q Consensus 206 ~~~~~gy~Via~D~~G~G~S~~~~~-~~~t~~~~~~di~~~l~~~l~~---~~i~lvGhS~Gg~ial~~a~~~----p~~ 277 (468)
..+++||.|+++|+.|-|....... ..+.+-|.+... +.+....+. .++.++|||-||.-++..|... ||.
T Consensus 21 ~~L~~GyaVv~pDY~Glg~~y~~~~~~a~avLD~vRAA-~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~~~YApeL 99 (290)
T PF03583_consen 21 AWLARGYAVVAPDYEGLGTPYLNGRSEAYAVLDAVRAA-RNLPPKLGLSPSSRVALWGYSQGGQAALWAAELAPSYAPEL 99 (290)
T ss_pred HHHHCCCEEEecCCCCCCCcccCcHhHHHHHHHHHHHH-HhcccccCCCCCCCEEEEeeCccHHHHHHHHHHhHHhCccc
Confidence 3345999999999999988321111 223333344333 333333342 5899999999999887766442 443
Q ss_pred ---cceEEEecCCC
Q 012188 278 ---VKSLTLLAPPY 288 (468)
Q Consensus 278 ---v~~lVl~~p~~ 288 (468)
+.+.++.+++.
T Consensus 100 ~~~l~Gaa~gg~~~ 113 (290)
T PF03583_consen 100 NRDLVGAAAGGPPA 113 (290)
T ss_pred ccceeEEeccCCcc
Confidence 66777666554
|
Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process |
| >COG4099 Predicted peptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.83 E-value=3.1e-08 Score=89.78 Aligned_cols=113 Identities=19% Similarity=0.105 Sum_probs=70.2
Q ss_pred CCCCceeEEEecC-----C--C-CeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCC-------------CC
Q 012188 167 SDCDCKFCTCWSS-----S--S-RDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFG-------------RS 225 (468)
Q Consensus 167 ~d~~~~~~~~~~~-----~--~-p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G-------------~S 225 (468)
+.+..+-|+-+.+ + - |.+||+||.|....-.. ..+. .|.-.++++.|-.+ .+
T Consensus 169 ~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~---~~l~----sg~gaiawa~pedqcfVlAPQy~~if~d~ 241 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDND---KVLS----SGIGAIAWAGPEDQCFVLAPQYNPIFADS 241 (387)
T ss_pred ccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhh---hhhh----cCccceeeecccCceEEEccccccccccc
Confidence 3455666666633 2 2 88999999886444222 1121 34444444444333 22
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcccCCc--eEEEEEEcccHHHHHHHHHhCCCccceEEEecCCC
Q 012188 226 PKPTDSLYTVREHLDMIEKSVIEPNKVK--SFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPY 288 (468)
Q Consensus 226 ~~~~~~~~t~~~~~~di~~~l~~~l~~~--~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~ 288 (468)
+... ..-....++.+...+.++.+++ +|+++|.|+||+-++.++.++|+.+.+.+++++..
T Consensus 242 e~~t--~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~ 304 (387)
T COG4099 242 EEKT--LLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGG 304 (387)
T ss_pred cccc--chhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCC
Confidence 2111 1122333344422566677764 89999999999999999999999999999998754
|
|
| >PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=98.80 E-value=3.9e-08 Score=87.94 Aligned_cols=103 Identities=17% Similarity=0.166 Sum_probs=72.1
Q ss_pred CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcc----------
Q 012188 180 SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEP---------- 249 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~---------- 249 (468)
.=|.|+|+||+.-...||.+++..++ ..||-|+++++-.- . .+. ....++..++-+ ..+.+.
T Consensus 45 ~yPVilF~HG~~l~ns~Ys~lL~HIA---SHGfIVVAPQl~~~--~-~p~-~~~Ei~~aa~V~-~WL~~gL~~~Lp~~V~ 116 (307)
T PF07224_consen 45 TYPVILFLHGFNLYNSFYSQLLAHIA---SHGFIVVAPQLYTL--F-PPD-GQDEIKSAASVI-NWLPEGLQHVLPENVE 116 (307)
T ss_pred CccEEEEeechhhhhHHHHHHHHHHh---hcCeEEEechhhcc--c-CCC-chHHHHHHHHHH-HHHHhhhhhhCCCCcc
Confidence 45899999999887788888888777 79999999998752 1 121 111222222222 222221
Q ss_pred cCCceEEEEEEcccHHHHHHHHHhCC--CccceEEEecCCCCC
Q 012188 250 NKVKSFHIVAHSLGCILALALAVKHP--GSVKSLTLLAPPYYP 290 (468)
Q Consensus 250 l~~~~i~lvGhS~Gg~ial~~a~~~p--~~v~~lVl~~p~~~~ 290 (468)
-+..++.++|||.||-.|..+|..+. -.+.++|.++|....
T Consensus 117 ~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~ 159 (307)
T PF07224_consen 117 ANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGT 159 (307)
T ss_pred cccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCC
Confidence 13469999999999999999999874 258999999987543
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.7e-07 Score=82.09 Aligned_cols=61 Identities=18% Similarity=0.232 Sum_probs=50.9
Q ss_pred ccCCCcEEEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 394 NHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 394 ~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
..+++|.|-|.|+.|.++|.+.+..+++.++++.++.-+ +||++.. ...+.+.|.+|++..
T Consensus 160 ~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a~vl~Hp-ggH~VP~---~~~~~~~i~~fi~~~ 220 (230)
T KOG2551|consen 160 RPLSTPSLHIFGETDTIVPSERSEQLAESFKDATVLEHP-GGHIVPN---KAKYKEKIADFIQSF 220 (230)
T ss_pred cCCCCCeeEEecccceeecchHHHHHHHhcCCCeEEecC-CCccCCC---chHHHHHHHHHHHHH
Confidence 467999999999999999999999999999999777667 5999763 446777777777653
|
|
| >smart00824 PKS_TE Thioesterase | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.7e-07 Score=84.56 Aligned_cols=89 Identities=20% Similarity=0.228 Sum_probs=65.7
Q ss_pred CccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceEEEEEEcccHHHHHHHHH
Q 012188 193 SAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAV 272 (468)
Q Consensus 193 s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~ 272 (468)
+...+..+...+. ..+.|+++|++|+|.+.... .+++++++.+...+.+..+..+++++|||+||.++...+.
T Consensus 11 ~~~~~~~~~~~l~----~~~~v~~~~~~g~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~ 83 (212)
T smart00824 11 GPHEYARLAAALR----GRRDVSALPLPGFGPGEPLP---ASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHAVAA 83 (212)
T ss_pred cHHHHHHHHHhcC----CCccEEEecCCCCCCCCCCC---CCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHH
Confidence 3333445667666 78999999999998765443 3677777665444555555678999999999999998888
Q ss_pred h---CCCccceEEEecCCC
Q 012188 273 K---HPGSVKSLTLLAPPY 288 (468)
Q Consensus 273 ~---~p~~v~~lVl~~p~~ 288 (468)
+ .++.+.+++++++..
T Consensus 84 ~l~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 84 RLEARGIPPAAVVLLDTYP 102 (212)
T ss_pred HHHhCCCCCcEEEEEccCC
Confidence 6 456799999887643
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. |
| >PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.5e-08 Score=98.08 Aligned_cols=106 Identities=16% Similarity=0.163 Sum_probs=57.0
Q ss_pred CCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCC-CCCC-C---------C-------C------CCC--CC
Q 012188 181 SRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGF-GRSP-K---------P-------T------DSL--YT 234 (468)
Q Consensus 181 ~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~-G~S~-~---------~-------~------~~~--~t 234 (468)
-|+|||-||.++++..+..+...|+ ++||-|+++|+|.. +-.. . . . ... ..
T Consensus 100 ~PvvIFSHGlgg~R~~yS~~~~eLA---S~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (379)
T PF03403_consen 100 FPVVIFSHGLGGSRTSYSAICGELA---SHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEE 176 (379)
T ss_dssp EEEEEEE--TT--TTTTHHHHHHHH---HTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGG
T ss_pred CCEEEEeCCCCcchhhHHHHHHHHH---hCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchh
Confidence 4899999999998888777877777 69999999999953 1100 0 0 0 000 00
Q ss_pred -HH-------HHHHHHH---HHHh----------------------cccCCceEEEEEEcccHHHHHHHHHhCCCccceE
Q 012188 235 -VR-------EHLDMIE---KSVI----------------------EPNKVKSFHIVAHSLGCILALALAVKHPGSVKSL 281 (468)
Q Consensus 235 -~~-------~~~~di~---~~l~----------------------~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~l 281 (468)
.+ .-++++. ..+. .+++.+++.++|||+||..++..+.+. .++++.
T Consensus 177 ~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~ 255 (379)
T PF03403_consen 177 EFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAG 255 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceE
Confidence 00 0011110 1111 123346899999999999999887775 689999
Q ss_pred EEecCCCCC
Q 012188 282 TLLAPPYYP 290 (468)
Q Consensus 282 Vl~~p~~~~ 290 (468)
|+++|...+
T Consensus 256 I~LD~W~~P 264 (379)
T PF03403_consen 256 ILLDPWMFP 264 (379)
T ss_dssp EEES---TT
T ss_pred EEeCCcccC
Confidence 999987654
|
|
| >PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins | Back alignment and domain information |
|---|
Probab=98.75 E-value=9.4e-08 Score=82.56 Aligned_cols=97 Identities=15% Similarity=0.150 Sum_probs=72.7
Q ss_pred eEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHH---HHHhcccCCceEEEEE
Q 012188 183 DTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIE---KSVIEPNKVKSFHIVA 259 (468)
Q Consensus 183 ~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~---~~l~~~l~~~~i~lvG 259 (468)
.+||+-|-|+-......+...|+ ++|+.|+.+|-+-|=.+. .+.++.+.|+. +...++.+.+++.|+|
T Consensus 4 ~~v~~SGDgGw~~~d~~~a~~l~---~~G~~VvGvdsl~Yfw~~------rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiG 74 (192)
T PF06057_consen 4 LAVFFSGDGGWRDLDKQIAEALA---KQGVPVVGVDSLRYFWSE------RTPEQTAADLARIIRHYRARWGRKRVVLIG 74 (192)
T ss_pred EEEEEeCCCCchhhhHHHHHHHH---HCCCeEEEechHHHHhhh------CCHHHHHHHHHHHHHHHHHHhCCceEEEEe
Confidence 57888887765566666788777 699999999976654443 35555666662 3344556788999999
Q ss_pred EcccHHHHHHHHHhCCC----ccceEEEecCCC
Q 012188 260 HSLGCILALALAVKHPG----SVKSLTLLAPPY 288 (468)
Q Consensus 260 hS~Gg~ial~~a~~~p~----~v~~lVl~~p~~ 288 (468)
+|+|+-+.-....+.|. +|+.++|++|..
T Consensus 75 YSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 75 YSFGADVLPFIYNRLPAALRARVAQVVLLSPST 107 (192)
T ss_pred ecCCchhHHHHHhhCCHHHHhheeEEEEeccCC
Confidence 99999888877777774 799999999754
|
VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium []. |
| >COG4188 Predicted dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.73 E-value=6.4e-08 Score=91.70 Aligned_cols=94 Identities=16% Similarity=0.132 Sum_probs=66.8
Q ss_pred CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCC--CCCCCCCC------------CCCCCHHHHHHHHHHH
Q 012188 180 SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLG--FGRSPKPT------------DSLYTVREHLDMIEKS 245 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G--~G~S~~~~------------~~~~t~~~~~~di~~~ 245 (468)
.-|.|++-||.|+...-+..+.+.++ +.||.|.++|++| .|..+... +..+++...++.+.+.
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~~A~~lA---s~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~ 146 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAWLAEHLA---SYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQL 146 (365)
T ss_pred cCCeEEecCCCCCCccchhhhHHHHh---hCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHh
Confidence 46899999999987666666778777 6899999999999 34443211 1223444445444322
Q ss_pred -----HhcccCCceEEEEEEcccHHHHHHHHHhCCC
Q 012188 246 -----VIEPNKVKSFHIVAHSLGCILALALAVKHPG 276 (468)
Q Consensus 246 -----l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~ 276 (468)
+..++...+|.++|||+||+.++.++.-..+
T Consensus 147 ~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 147 TASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred hcCcccccccCccceEEEecccccHHHHHhcccccc
Confidence 3445566799999999999999999876654
|
|
| >KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=98.72 E-value=5.9e-07 Score=86.03 Aligned_cols=105 Identities=13% Similarity=0.155 Sum_probs=73.7
Q ss_pred CCCeEEEEecCCC---C--ccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhc------
Q 012188 180 SSRDTLFVKTQGP---S--AFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIE------ 248 (468)
Q Consensus 180 ~~p~vl~lHG~g~---s--~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~------ 248 (468)
..|.|||+||+|. + ...+..+...++ .+-+..|+.+|+|=--+..-|. ..+|-.+.+ ..+.+
T Consensus 89 ~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a--~~~~~vvvSVdYRLAPEh~~Pa----~y~D~~~Al-~w~~~~~~~~~ 161 (336)
T KOG1515|consen 89 KLPVLVYFHGGGFCLGSANSPAYDSFCTRLA--AELNCVVVSVDYRLAPEHPFPA----AYDDGWAAL-KWVLKNSWLKL 161 (336)
T ss_pred CceEEEEEeCCccEeCCCCCchhHHHHHHHH--HHcCeEEEecCcccCCCCCCCc----cchHHHHHH-HHHHHhHHHHh
Confidence 4588999999886 2 233444555554 2368899999999755554443 455555555 34444
Q ss_pred ccCCceEEEEEEcccHHHHHHHHHhC------CCccceEEEecCCCCCC
Q 012188 249 PNKVKSFHIVAHSLGCILALALAVKH------PGSVKSLTLLAPPYYPV 291 (468)
Q Consensus 249 ~l~~~~i~lvGhS~Gg~ial~~a~~~------p~~v~~lVl~~p~~~~~ 291 (468)
..+.++++|+|.|.||.+|..+|.+. +-++++.|++-|.....
T Consensus 162 ~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~ 210 (336)
T KOG1515|consen 162 GADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGT 210 (336)
T ss_pred CCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCC
Confidence 34557899999999999999888763 35799999999876553
|
|
| >PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.3e-07 Score=90.24 Aligned_cols=103 Identities=17% Similarity=0.181 Sum_probs=56.6
Q ss_pred CCCeEEEEecCCCCcc---------------ch---hhhhhhccccCCCcceEEEECCCCCCCCCCCCC----CCCCHHH
Q 012188 180 SSRDTLFVKTQGPSAF---------------WT---ETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD----SLYTVRE 237 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~---------------~~---~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~----~~~t~~~ 237 (468)
+-|.||++||.++... +. ..+...| +++||.|+++|.+|+|+...... ..++...
T Consensus 114 p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~L---Ak~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~ 190 (390)
T PF12715_consen 114 PFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQL---AKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQA 190 (390)
T ss_dssp -EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHH---HTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHH
T ss_pred CCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHH---HhCCCEEEEEccccccccccccccccccchhHHH
Confidence 3478999999766210 11 1122333 37999999999999999854332 1122222
Q ss_pred HHH----------------HHH-HHHhcc---cCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecC
Q 012188 238 HLD----------------MIE-KSVIEP---NKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAP 286 (468)
Q Consensus 238 ~~~----------------di~-~~l~~~---l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p 286 (468)
++. ++. ..++.. ...++|.++|+||||..++.+|+.. ++|++.|..+-
T Consensus 191 la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~~ 258 (390)
T PF12715_consen 191 LARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALD-DRIKATVANGY 258 (390)
T ss_dssp HHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--TT--EEEEES-
T ss_pred HHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcc-hhhHhHhhhhh
Confidence 221 110 122232 3347999999999999999999986 48988887764
|
|
| >PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.64 E-value=6.7e-06 Score=82.86 Aligned_cols=111 Identities=14% Similarity=0.056 Sum_probs=66.8
Q ss_pred CCCCeEEEEecCCCCccchhhhh---hhccc------------cCCCcceEEEECCC-CCCCCCCCCC--CCCCHHHHHH
Q 012188 179 SSSRDTLFVKTQGPSAFWTETLF---PNFSS------------ASKSTYRLFAIDLL-GFGRSPKPTD--SLYTVREHLD 240 (468)
Q Consensus 179 ~~~p~vl~lHG~g~s~~~~~~~~---~~L~~------------~~~~gy~Via~D~~-G~G~S~~~~~--~~~t~~~~~~ 240 (468)
...|.||.+.|+|+++.....+. |.... ...+..+++.+|+| |.|.|..... ...+.++.++
T Consensus 38 ~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~ 117 (415)
T PF00450_consen 38 EDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAE 117 (415)
T ss_dssp CSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE--STTSTT-EESSGGGGS-SHHHHHH
T ss_pred CCccEEEEecCCceeccccccccccCceEEeecccccccccccccccccceEEEeecCceEEeeccccccccchhhHHHH
Confidence 45689999999998655332222 11111 01135799999965 9999965443 2347777887
Q ss_pred HHHHHHhc-------ccCCceEEEEEEcccHHHHHHHHHh----C------CCccceEEEecCCCCC
Q 012188 241 MIEKSVIE-------PNKVKSFHIVAHSLGCILALALAVK----H------PGSVKSLTLLAPPYYP 290 (468)
Q Consensus 241 di~~~l~~-------~l~~~~i~lvGhS~Gg~ial~~a~~----~------p~~v~~lVl~~p~~~~ 290 (468)
++. .+++ ++...+++|.|-|+||..+-.+|.+ . +-.++++++.+|...+
T Consensus 118 ~~~-~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~dp 183 (415)
T PF00450_consen 118 DLY-EFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWIDP 183 (415)
T ss_dssp HHH-HHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SBH
T ss_pred HHH-HHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCccccc
Confidence 774 4433 2344699999999999876655543 3 3358999999887654
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A .... |
| >PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH | Back alignment and domain information |
|---|
Probab=98.64 E-value=5.7e-08 Score=88.09 Aligned_cols=51 Identities=24% Similarity=0.327 Sum_probs=38.8
Q ss_pred HHHHHHHHHhcccCC--ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCC
Q 012188 238 HLDMIEKSVIEPNKV--KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 238 ~~~di~~~l~~~l~~--~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~ 290 (468)
+-+.+ ..+.++-.. ++|.|+|.|.||-+|+.+|.++| .|+++|.++|....
T Consensus 6 fe~Ai-~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~ 58 (213)
T PF08840_consen 6 FEEAI-DWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVV 58 (213)
T ss_dssp HHHHH-HHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB-
T ss_pred HHHHH-HHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeE
Confidence 34444 455555443 69999999999999999999999 79999999987644
|
Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B. |
| >PLN02733 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=98.49 E-value=1.9e-07 Score=93.08 Aligned_cols=93 Identities=20% Similarity=0.357 Sum_probs=69.2
Q ss_pred ccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCC-CCCHHHHHHHHHHHHhcccCCceEEEEEEcccHHHHHHHHH
Q 012188 194 AFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDS-LYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAV 272 (468)
Q Consensus 194 ~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~-~~t~~~~~~di~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~ 272 (468)
..++..+++.|. +.||.+ ..|++|+|.+.+.... ...++++.+.+ ..+.+..+.++++|+||||||.+++.++.
T Consensus 107 ~~~~~~li~~L~---~~GY~~-~~dL~g~gYDwR~~~~~~~~~~~Lk~lI-e~~~~~~g~~kV~LVGHSMGGlva~~fl~ 181 (440)
T PLN02733 107 VYYFHDMIEQLI---KWGYKE-GKTLFGFGYDFRQSNRLPETMDGLKKKL-ETVYKASGGKKVNIISHSMGGLLVKCFMS 181 (440)
T ss_pred HHHHHHHHHHHH---HcCCcc-CCCcccCCCCccccccHHHHHHHHHHHH-HHHHHHcCCCCEEEEEECHhHHHHHHHHH
Confidence 344556888887 578765 8999999999765421 12344444445 45666777889999999999999999999
Q ss_pred hCCCc----cceEEEecCCCCCC
Q 012188 273 KHPGS----VKSLTLLAPPYYPV 291 (468)
Q Consensus 273 ~~p~~----v~~lVl~~p~~~~~ 291 (468)
.+|+. |+++|.++++....
T Consensus 182 ~~p~~~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 182 LHSDVFEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred HCCHhHHhHhccEEEECCCCCCC
Confidence 98864 78999999886553
|
|
| >PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria | Back alignment and domain information |
|---|
Probab=98.45 E-value=2.4e-05 Score=77.02 Aligned_cols=82 Identities=15% Similarity=0.197 Sum_probs=59.0
Q ss_pred hhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhc----ccC-CceEEEEEEcccHHHHHHHHHh
Q 012188 199 TLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIE----PNK-VKSFHIVAHSLGCILALALAVK 273 (468)
Q Consensus 199 ~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~----~l~-~~~i~lvGhS~Gg~ial~~a~~ 273 (468)
.+.-.|. .|+.|+.+...- .|. ...|+.|.+... +.+++ ... ..+..|+|.+.||+.++.+|+.
T Consensus 92 evG~AL~----~GHPvYFV~F~p-----~P~-pgQTl~DV~~ae-~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~ 160 (581)
T PF11339_consen 92 EVGVALR----AGHPVYFVGFFP-----EPE-PGQTLEDVMRAE-AAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAAL 160 (581)
T ss_pred HHHHHHH----cCCCeEEEEecC-----CCC-CCCcHHHHHHHH-HHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhc
Confidence 3555665 788888776532 111 235888877665 34443 232 2489999999999999999999
Q ss_pred CCCccceEEEecCCCCCC
Q 012188 274 HPGSVKSLTLLAPPYYPV 291 (468)
Q Consensus 274 ~p~~v~~lVl~~p~~~~~ 291 (468)
+|+.+.-+|+.+.|...+
T Consensus 161 ~Pd~~gplvlaGaPlsyw 178 (581)
T PF11339_consen 161 RPDLVGPLVLAGAPLSYW 178 (581)
T ss_pred CcCccCceeecCCCcccc
Confidence 999999999998776553
|
Their function is unknown. |
| >KOG2112 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.39 E-value=4e-06 Score=73.08 Aligned_cols=103 Identities=16% Similarity=0.124 Sum_probs=64.8
Q ss_pred CeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCC-----------------CCCCCCCCHHHHHHHHHH
Q 012188 182 RDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSP-----------------KPTDSLYTVREHLDMIEK 244 (468)
Q Consensus 182 p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~-----------------~~~~~~~t~~~~~~di~~ 244 (468)
.+||++||.|.+..-+.+++..+. -++...|.|..|-.-.+. ....+...+...++.+ .
T Consensus 4 atIi~LHglGDsg~~~~~~~~~l~---l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i-~ 79 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGSGWAQFLKQLP---LPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNI-A 79 (206)
T ss_pred EEEEEEecCCCCCccHHHHHHcCC---CCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHH-H
Confidence 479999999987665555665554 366777776543211110 0001122333444444 3
Q ss_pred HHhcc---cC--CceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCC
Q 012188 245 SVIEP---NK--VKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPY 288 (468)
Q Consensus 245 ~l~~~---l~--~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~ 288 (468)
.++++ .| ..++.+-|.|+||.++++.+..+|..+.+.+...+..
T Consensus 80 ~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~ 128 (206)
T KOG2112|consen 80 NLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFL 128 (206)
T ss_pred HHHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeecccccc
Confidence 44443 23 3589999999999999999999988888887766543
|
|
| >KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.32 E-value=3.2e-06 Score=78.41 Aligned_cols=99 Identities=15% Similarity=0.118 Sum_probs=69.1
Q ss_pred CeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCC--ceEEEEE
Q 012188 182 RDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKV--KSFHIVA 259 (468)
Q Consensus 182 p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~--~~i~lvG 259 (468)
..||++-|..+-.. ...++..++.||.|+.+++||++.|.+.+....+... ++.+.+..++.+|. +.+++.|
T Consensus 244 ~LvIC~EGNAGFYE-----vG~m~tP~~lgYsvLGwNhPGFagSTG~P~p~n~~nA-~DaVvQfAI~~Lgf~~edIilyg 317 (517)
T KOG1553|consen 244 DLVICFEGNAGFYE-----VGVMNTPAQLGYSVLGWNHPGFAGSTGLPYPVNTLNA-ADAVVQFAIQVLGFRQEDIILYG 317 (517)
T ss_pred eEEEEecCCccceE-----eeeecChHHhCceeeccCCCCccccCCCCCcccchHH-HHHHHHHHHHHcCCCccceEEEE
Confidence 45677777554221 1222223347999999999999999877643333333 33332455666654 6899999
Q ss_pred EcccHHHHHHHHHhCCCccceEEEecCC
Q 012188 260 HSLGCILALALAVKHPGSVKSLTLLAPP 287 (468)
Q Consensus 260 hS~Gg~ial~~a~~~p~~v~~lVl~~p~ 287 (468)
+|.||..++.+|..||+ |+++|+-+..
T Consensus 318 WSIGGF~~~waAs~YPd-VkavvLDAtF 344 (517)
T KOG1553|consen 318 WSIGGFPVAWAASNYPD-VKAVVLDATF 344 (517)
T ss_pred eecCCchHHHHhhcCCC-ceEEEeecch
Confidence 99999999999999996 9999987653
|
|
| >PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids [] | Back alignment and domain information |
|---|
Probab=98.31 E-value=3.5e-07 Score=82.36 Aligned_cols=87 Identities=23% Similarity=0.344 Sum_probs=49.6
Q ss_pred CeEEEEecCCC-C-ccchhhhhhhccccCCCcce---EEEECCCCCCCCCCCCC---CCCCHHHHHHHHHHHHhcccCCc
Q 012188 182 RDTLFVKTQGP-S-AFWTETLFPNFSSASKSTYR---LFAIDLLGFGRSPKPTD---SLYTVREHLDMIEKSVIEPNKVK 253 (468)
Q Consensus 182 p~vl~lHG~g~-s-~~~~~~~~~~L~~~~~~gy~---Via~D~~G~G~S~~~~~---~~~t~~~~~~di~~~l~~~l~~~ 253 (468)
.||||+||.++ . ..|. .+.+.|. ++||. |+++++-....+..... ...+..++.+-| ..+++..|.
T Consensus 2 ~PVVlVHG~~~~~~~~w~-~~~~~l~---~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI-~~Vl~~TGa- 75 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWS-TLAPYLK---AAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFI-DAVLAYTGA- 75 (219)
T ss_dssp --EEEE--TTTTTCGGCC-HHHHHHH---HTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHH-HHHHHHHT--
T ss_pred CCEEEECCCCcchhhCHH-HHHHHHH---HcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHH-HHHHHhhCC-
Confidence 48999999876 3 3355 4777776 58999 89999844333221110 011223444444 567778898
Q ss_pred eEEEEEEcccHHHHHHHHHhC
Q 012188 254 SFHIVAHSLGCILALALAVKH 274 (468)
Q Consensus 254 ~i~lvGhS~Gg~ial~~a~~~ 274 (468)
++.||||||||.++..+....
T Consensus 76 kVDIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 76 KVDIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp -EEEEEETCHHHHHHHHHHHC
T ss_pred EEEEEEcCCcCHHHHHHHHHc
Confidence 999999999999999887644
|
This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A .... |
| >COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.29 E-value=7.2e-06 Score=75.20 Aligned_cols=105 Identities=14% Similarity=0.092 Sum_probs=70.8
Q ss_pred CCeEEEEecCCCCccchhhhh--hhccccCCCcceEEEECC-C------CCCCCCCCCC---CCCCHHHHHHHHHHHHhc
Q 012188 181 SRDTLFVKTQGPSAFWTETLF--PNFSSASKSTYRLFAIDL-L------GFGRSPKPTD---SLYTVREHLDMIEKSVIE 248 (468)
Q Consensus 181 ~p~vl~lHG~g~s~~~~~~~~--~~L~~~~~~gy~Via~D~-~------G~G~S~~~~~---~~~t~~~~~~di~~~l~~ 248 (468)
.|.||++||.+++..-..... ..++ .+.||-|+.+|. + +.|.+..+.+ +..++..+.+.+ ..+..
T Consensus 61 apLvv~LHG~~~sgag~~~~sg~d~lA--d~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~ddVgflr~lv-a~l~~ 137 (312)
T COG3509 61 APLVVVLHGSGGSGAGQLHGTGWDALA--DREGFLVAYPDGYDRAWNANGCGNWFGPADRRRGVDDVGFLRALV-AKLVN 137 (312)
T ss_pred CCEEEEEecCCCChHHhhcccchhhhh--cccCcEEECcCccccccCCCcccccCCcccccCCccHHHHHHHHH-HHHHH
Confidence 468899999877433211111 2222 137999999962 2 2334433332 222333444444 67778
Q ss_pred ccCCc--eEEEEEEcccHHHHHHHHHhCCCccceEEEecCCC
Q 012188 249 PNKVK--SFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPY 288 (468)
Q Consensus 249 ~l~~~--~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~ 288 (468)
+++++ +|++.|.|-||.++..++..+|+.+.++..+++..
T Consensus 138 ~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 138 EYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred hcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 88886 89999999999999999999999999999988654
|
|
| >PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3 | Back alignment and domain information |
|---|
Probab=98.28 E-value=3.6e-07 Score=88.08 Aligned_cols=112 Identities=16% Similarity=0.200 Sum_probs=63.3
Q ss_pred cCCCCeEEEEecCCCCc---cchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHH---HHHHhcc--
Q 012188 178 SSSSRDTLFVKTQGPSA---FWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMI---EKSVIEP-- 249 (468)
Q Consensus 178 ~~~~p~vl~lHG~g~s~---~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di---~~~l~~~-- 249 (468)
..++|++|++|||.++. .|...+...+-.....+++||++|+...-...-.. .........+.+ ...+.+.
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~-a~~n~~~vg~~la~~l~~L~~~~g 146 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQ-AVANTRLVGRQLAKFLSFLINNFG 146 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHH-HHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccc-hhhhHHHHHHHHHHHHHHHHhhcC
Confidence 56789999999998765 46655555433111158999999996421110000 000111122222 1233333
Q ss_pred cCCceEEEEEEcccHHHHHHHHHhCCC--ccceEEEecCCCCC
Q 012188 250 NKVKSFHIVAHSLGCILALALAVKHPG--SVKSLTLLAPPYYP 290 (468)
Q Consensus 250 l~~~~i~lvGhS~Gg~ial~~a~~~p~--~v~~lVl~~p~~~~ 290 (468)
+..++++|||||+||.+|-.++..... ++.+++.++|....
T Consensus 147 ~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 147 VPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPL 189 (331)
T ss_dssp --GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TT
T ss_pred CChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccc
Confidence 345799999999999999999998887 89999999986543
|
1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A .... |
| >KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.24 E-value=9.3e-06 Score=74.57 Aligned_cols=106 Identities=12% Similarity=0.139 Sum_probs=69.6
Q ss_pred CCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCC------CCCCC--------------CC-------
Q 012188 181 SRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSP------KPTDS--------------LY------- 233 (468)
Q Consensus 181 ~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~------~~~~~--------------~~------- 233 (468)
=|.+||-||.|+++..+..+.-.|+ ..||-|.++++|-+-.+. .+... ..
T Consensus 118 ~PvvvFSHGLggsRt~YSa~c~~LA---ShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irN 194 (399)
T KOG3847|consen 118 YPVVVFSHGLGGSRTLYSAYCTSLA---SHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRN 194 (399)
T ss_pred ccEEEEecccccchhhHHHHhhhHh---hCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeC
Confidence 4899999999999888777777666 699999999998765431 10000 00
Q ss_pred -----CHHHHHHHHH--H--------------------HHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecC
Q 012188 234 -----TVREHLDMIE--K--------------------SVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAP 286 (468)
Q Consensus 234 -----t~~~~~~di~--~--------------------~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p 286 (468)
...+....+. . .+...+.-.++.++|||+||..++...+.+. .+++.|+++.
T Consensus 195 eqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t-~FrcaI~lD~ 273 (399)
T KOG3847|consen 195 EQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHT-DFRCAIALDA 273 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcccc-ceeeeeeeee
Confidence 0111111110 0 1111222347899999999999988777654 6999999988
Q ss_pred CCCC
Q 012188 287 PYYP 290 (468)
Q Consensus 287 ~~~~ 290 (468)
..++
T Consensus 274 WM~P 277 (399)
T KOG3847|consen 274 WMFP 277 (399)
T ss_pred eecc
Confidence 7655
|
|
| >COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.24 E-value=3.5e-05 Score=68.92 Aligned_cols=107 Identities=18% Similarity=0.243 Sum_probs=67.2
Q ss_pred eEEEEecCCCCccchhhhhhhccccC--CCcceEEEECCCCC----CCCCCCC----------CCCCCHHHH---HHHHH
Q 012188 183 DTLFVKTQGPSAFWTETLFPNFSSAS--KSTYRLFAIDLLGF----GRSPKPT----------DSLYTVREH---LDMIE 243 (468)
Q Consensus 183 ~vl~lHG~g~s~~~~~~~~~~L~~~~--~~gy~Via~D~~G~----G~S~~~~----------~~~~t~~~~---~~di~ 243 (468)
|.||+||.++...-...++..|...- ...--++.+|--|- |.=++.. +...+..++ ...+.
T Consensus 47 PTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~m 126 (288)
T COG4814 47 PTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKAM 126 (288)
T ss_pred ceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHHH
Confidence 78999999887665445555554111 11123455565551 1111110 111233333 33333
Q ss_pred HHHhcccCCceEEEEEEcccHHHHHHHHHhCCC-----ccceEEEecCCCC
Q 012188 244 KSVIEPNKVKSFHIVAHSLGCILALALAVKHPG-----SVKSLTLLAPPYY 289 (468)
Q Consensus 244 ~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~-----~v~~lVl~~p~~~ 289 (468)
..|.++++++++.+|||||||.-...++..+.. .++++|.+++++.
T Consensus 127 syL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 127 SYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 566778999999999999999999999987643 4899999998876
|
|
| >PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins | Back alignment and domain information |
|---|
Probab=98.21 E-value=0.00014 Score=67.49 Aligned_cols=61 Identities=18% Similarity=0.333 Sum_probs=52.3
Q ss_pred cCCCcEEEEeeCCCCccChhhHHHHHHhCC----CCeEEEecCCCccccccCcHHHHHHHHHHHH
Q 012188 395 HVKCDVNVFHGEDDELIPVECSYNVQRKIP----RARVKVIEKKDHITIVVGRQKTFARELEEIW 455 (468)
Q Consensus 395 ~i~~PvLii~G~~D~~vp~~~~~~l~~~~p----~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl 455 (468)
...+|-|+++++.|.+++.+..++..+... +++...++++.|..++..+|+++.+.+.+||
T Consensus 176 ~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 176 PSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 346899999999999999998777766543 3678889999999998899999999999986
|
|
| >PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.21 E-value=5e-06 Score=76.33 Aligned_cols=109 Identities=15% Similarity=0.102 Sum_probs=65.9
Q ss_pred CCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCC-C---CCCCHHHHHHHHHHHHhcccCCce
Q 012188 179 SSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPT-D---SLYTVREHLDMIEKSVIEPNKVKS 254 (468)
Q Consensus 179 ~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~-~---~~~t~~~~~~di~~~l~~~l~~~~ 254 (468)
+++..+||+||+..+..-.-.-...+...+.-.-.++.+.||..|.-..-. + ...+-..+.+-| ..+.+..+.++
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L-~~L~~~~~~~~ 94 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFL-RDLARAPGIKR 94 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHH-HHHHhccCCce
Confidence 346789999998875331111111222222223389999999987632111 1 112233333333 45555557789
Q ss_pred EEEEEEcccHHHHHHHHHh----CC-----CccceEEEecCCC
Q 012188 255 FHIVAHSLGCILALALAVK----HP-----GSVKSLTLLAPPY 288 (468)
Q Consensus 255 i~lvGhS~Gg~ial~~a~~----~p-----~~v~~lVl~~p~~ 288 (468)
|+|++||||+.+.+..... .+ .++..+|+.+|-.
T Consensus 95 I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDi 137 (233)
T PF05990_consen 95 IHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDI 137 (233)
T ss_pred EEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCC
Confidence 9999999999999887654 11 3678889988755
|
|
| >KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.21 E-value=1.2e-05 Score=79.84 Aligned_cols=162 Identities=15% Similarity=0.153 Sum_probs=104.1
Q ss_pred CCCCeEEEEecCCC---CccchhhhhhhccccCCCcceEEEECCCC-CCCCCCCCCCCCCHHHHHHHHH-------HHHh
Q 012188 179 SSSRDTLFVKTQGP---SAFWTETLFPNFSSASKSTYRLFAIDLLG-FGRSPKPTDSLYTVREHLDMIE-------KSVI 247 (468)
Q Consensus 179 ~~~p~vl~lHG~g~---s~~~~~~~~~~L~~~~~~gy~Via~D~~G-~G~S~~~~~~~~t~~~~~~di~-------~~l~ 247 (468)
+..|.++++||.+. .+.|...+...|+ +..+-..+-++|++. .|. ..+..-++.+. ..+.
T Consensus 174 ~~spl~i~aps~p~ap~tSd~~~~wqs~ls-l~gevvev~tfdl~n~igG--------~nI~h~ae~~vSf~r~kvlei~ 244 (784)
T KOG3253|consen 174 PASPLAIKAPSTPLAPKTSDRMWSWQSRLS-LKGEVVEVPTFDLNNPIGG--------ANIKHAAEYSVSFDRYKVLEIT 244 (784)
T ss_pred cCCceEEeccCCCCCCccchHHHhHHHHHh-hhceeeeeccccccCCCCC--------cchHHHHHHHHHHhhhhhhhhh
Confidence 34678899999872 2222222223332 223566778888764 221 23333333331 1233
Q ss_pred cccCCceEEEEEEcccHHHHHHHHHhCC-CccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHH
Q 012188 248 EPNKVKSFHIVAHSLGCILALALAVKHP-GSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEH 326 (468)
Q Consensus 248 ~~l~~~~i~lvGhS~Gg~ial~~a~~~p-~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (468)
.++...+++|+|.|||+.++.....-.. ..|+++|+++=+........
T Consensus 245 gefpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgpr------------------------------- 293 (784)
T KOG3253|consen 245 GEFPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGPR------------------------------- 293 (784)
T ss_pred ccCCCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCccc-------------------------------
Confidence 3566679999999999888887766543 34899999885543311110
Q ss_pred HhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeC
Q 012188 327 ISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGE 406 (468)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~ 406 (468)
...++.+-.++.|+||+.|.
T Consensus 294 ------------------------------------------------------------girDE~Lldmk~PVLFV~Gs 313 (784)
T KOG3253|consen 294 ------------------------------------------------------------GIRDEALLDMKQPVLFVIGS 313 (784)
T ss_pred ------------------------------------------------------------CCcchhhHhcCCceEEEecC
Confidence 00011123458999999999
Q ss_pred CCCccChhhHHHHHHhCC-CCeEEEecCCCccccc
Q 012188 407 DDELIPVECSYNVQRKIP-RARVKVIEKKDHITIV 440 (468)
Q Consensus 407 ~D~~vp~~~~~~l~~~~p-~~~l~~i~~~gH~~~~ 440 (468)
+|..++++..+++.+++. ..+++++.+++|.+-.
T Consensus 314 nd~mcspn~ME~vreKMqA~~elhVI~~adhsmai 348 (784)
T KOG3253|consen 314 NDHMCSPNSMEEVREKMQAEVELHVIGGADHSMAI 348 (784)
T ss_pred CcccCCHHHHHHHHHHhhccceEEEecCCCccccC
Confidence 999999999999999874 5689999999998764
|
|
| >PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters | Back alignment and domain information |
|---|
Probab=98.20 E-value=2.5e-05 Score=75.34 Aligned_cols=110 Identities=16% Similarity=0.087 Sum_probs=71.3
Q ss_pred CCCeEEEEecCCCCccchhhhh---hhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceEE
Q 012188 180 SSRDTLFVKTQGPSAFWTETLF---PNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFH 256 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~~~~~---~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i~ 256 (468)
+.|.||++||+|..-......+ -.+..++. ...+++.|+.-...-+....-...+.+.++.. ..+++..|.+.++
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y-~~Lv~~~G~~nI~ 198 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-EVSILVLDYSLTSSDEHGHKYPTQLRQLVATY-DYLVESEGNKNII 198 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-CCeEEEEeccccccccCCCcCchHHHHHHHHH-HHHHhccCCCeEE
Confidence 4689999999986222111111 11222222 45889999875430011111234677777777 6888778889999
Q ss_pred EEEEcccHHHHHHHHHhCC-----CccceEEEecCCCCCC
Q 012188 257 IVAHSLGCILALALAVKHP-----GSVKSLTLLAPPYYPV 291 (468)
Q Consensus 257 lvGhS~Gg~ial~~a~~~p-----~~v~~lVl~~p~~~~~ 291 (468)
|+|.|.||.+++.+..... -..+++|+++|.....
T Consensus 199 LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 199 LMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred EEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 9999999999988775321 1368999999987664
|
In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved []. |
| >PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=98.19 E-value=0.00011 Score=70.39 Aligned_cols=108 Identities=15% Similarity=0.172 Sum_probs=70.5
Q ss_pred CCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCC--CCCCCC--------------CCCCC------------
Q 012188 181 SRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLG--FGRSPK--------------PTDSL------------ 232 (468)
Q Consensus 181 ~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G--~G~S~~--------------~~~~~------------ 232 (468)
...||++||.+.+..|...+-+.-..+-..|+..+++.+|. ....+. .....
T Consensus 87 ~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 166 (310)
T PF12048_consen 87 QGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEA 166 (310)
T ss_pred ceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccccHh
Confidence 45899999999998887544333333346899999998887 111100 00000
Q ss_pred CCHHHHH----HHHH--HHHhcccCCceEEEEEEcccHHHHHHHHHhCCC-ccceEEEecCCC
Q 012188 233 YTVREHL----DMIE--KSVIEPNKVKSFHIVAHSLGCILALALAVKHPG-SVKSLTLLAPPY 288 (468)
Q Consensus 233 ~t~~~~~----~di~--~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~-~v~~lVl~~p~~ 288 (468)
.....+. .-|. ..+.+..+..+++|+||+.|+..++.+....+. .++++|++++..
T Consensus 167 ~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~ 229 (310)
T PF12048_consen 167 EAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYW 229 (310)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCC
Confidence 0111111 1121 234556676779999999999999999988775 589999999764
|
This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes. |
| >PRK10439 enterobactin/ferric enterobactin esterase; Provisional | Back alignment and domain information |
|---|
Probab=98.16 E-value=0.00012 Score=73.03 Aligned_cols=36 Identities=14% Similarity=0.224 Sum_probs=33.5
Q ss_pred ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCC
Q 012188 253 KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPY 288 (468)
Q Consensus 253 ~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~ 288 (468)
++.+|.|+||||+.|+.++.+||+.|.+++.+++.+
T Consensus 288 ~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 288 DRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred cceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 578999999999999999999999999999999764
|
|
| >KOG1551 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.11 E-value=0.00012 Score=65.77 Aligned_cols=59 Identities=20% Similarity=0.317 Sum_probs=51.7
Q ss_pred EEEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhcC
Q 012188 400 VNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSSS 459 (468)
Q Consensus 400 vLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~ 459 (468)
+.++.+++|..+|......+.+.+|++++..++ .||...+.-..+.|.+.|.+-|++..
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPGCEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDRLD 367 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCCCEEEEee-cCceeeeehhchHHHHHHHHHHHhhh
Confidence 678899999999998899999999999999999 59977665678899999999887753
|
|
| >PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=98.00 E-value=0.00014 Score=64.80 Aligned_cols=82 Identities=17% Similarity=0.179 Sum_probs=52.2
Q ss_pred CCeEEEEecCCCCccchhhhhhhccccCCCcceE-EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceEEEEE
Q 012188 181 SRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRL-FAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVA 259 (468)
Q Consensus 181 ~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~V-ia~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i~lvG 259 (468)
+..|||+.|||....-. ..|. +..+|.| +++|+|-. +++. ++ .+.+.+.|||
T Consensus 11 ~~LilfF~GWg~d~~~f----~hL~--~~~~~D~l~~yDYr~l-----------~~d~---~~-------~~y~~i~lvA 63 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPF----SHLI--LPENYDVLICYDYRDL-----------DFDF---DL-------SGYREIYLVA 63 (213)
T ss_pred CeEEEEEecCCCChHHh----hhcc--CCCCccEEEEecCccc-----------cccc---cc-------ccCceEEEEE
Confidence 45799999999765533 2221 1134544 56777642 1110 11 2347899999
Q ss_pred EcccHHHHHHHHHhCCCccceEEEecCCCCCC
Q 012188 260 HSLGCILALALAVKHPGSVKSLTLLAPPYYPV 291 (468)
Q Consensus 260 hS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~ 291 (468)
+|||-++|..+....| ++..|.+++...+.
T Consensus 64 WSmGVw~A~~~l~~~~--~~~aiAINGT~~Pi 93 (213)
T PF04301_consen 64 WSMGVWAANRVLQGIP--FKRAIAINGTPYPI 93 (213)
T ss_pred EeHHHHHHHHHhccCC--cceeEEEECCCCCc
Confidence 9999999988766543 67778887766553
|
|
| >PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.97 E-value=3.3e-05 Score=61.12 Aligned_cols=64 Identities=14% Similarity=0.268 Sum_probs=57.3
Q ss_pred CCcEEEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhcCCC
Q 012188 397 KCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSSSGH 461 (468)
Q Consensus 397 ~~PvLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~~~ 461 (468)
..|+|++.++.|+.+|.+.++.+.+.+++++++.+++.||..+. ....-+.+.+.+||....-+
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~~-~~s~C~~~~v~~yl~~G~lP 97 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPGSRLVTVDGAGHGVYA-GGSPCVDKAVDDYLLDGTLP 97 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCCceEEEEeccCcceec-CCChHHHHHHHHHHHcCCCC
Confidence 58999999999999999999999999999999999999999985 56677899999999865433
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity |
| >COG3150 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.00014 Score=60.94 Aligned_cols=92 Identities=16% Similarity=0.162 Sum_probs=60.3
Q ss_pred EEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceEEEEEEccc
Q 012188 184 TLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLG 263 (468)
Q Consensus 184 vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i~lvGhS~G 263 (468)
||++||+.+|..-.+... +. ..+..|.|-.+.|.... ..+..+.++.+ ..++..++.+...|+|-|+|
T Consensus 2 ilYlHGFnSSP~shka~l--~~-------q~~~~~~~~i~y~~p~l--~h~p~~a~~el-e~~i~~~~~~~p~ivGssLG 69 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVL--LL-------QFIDEDVRDIEYSTPHL--PHDPQQALKEL-EKAVQELGDESPLIVGSSLG 69 (191)
T ss_pred eEEEecCCCCcccHHHHH--HH-------HHHhccccceeeecCCC--CCCHHHHHHHH-HHHHHHcCCCCceEEeecch
Confidence 899999987655443211 11 11223333333342222 23788888888 57778888778999999999
Q ss_pred HHHHHHHHHhCCCccceEEEecCCCCC
Q 012188 264 CILALALAVKHPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 264 g~ial~~a~~~p~~v~~lVl~~p~~~~ 290 (468)
|+.|.+++.++. ++ .|+++|...+
T Consensus 70 GY~At~l~~~~G--ir-av~~NPav~P 93 (191)
T COG3150 70 GYYATWLGFLCG--IR-AVVFNPAVRP 93 (191)
T ss_pred HHHHHHHHHHhC--Ch-hhhcCCCcCc
Confidence 999999999975 33 3556776655
|
|
| >COG2936 Predicted acyl esterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00037 Score=70.61 Aligned_cols=126 Identities=14% Similarity=0.041 Sum_probs=85.1
Q ss_pred CCCcCCCCceeEEEecC----CCCeEEEEecCCCCc----cc-hhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCC
Q 012188 163 IPRWSDCDCKFCTCWSS----SSRDTLFVKTQGPSA----FW-TETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLY 233 (468)
Q Consensus 163 ~~r~~d~~~~~~~~~~~----~~p~vl~lHG~g~s~----~~-~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~ 233 (468)
.....||.+++..-|-+ +.|+++..+-++-.. .+ .....+.....+++||.|+..|.||.|.|++.....+
T Consensus 23 ~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~~~ 102 (563)
T COG2936 23 MVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDPES 102 (563)
T ss_pred eEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcccceec
Confidence 45667999999888843 346777777233211 11 1112231112346999999999999999988765333
Q ss_pred C--HHHHHHHHHHHHhcc-cCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCC
Q 012188 234 T--VREHLDMIEKSVIEP-NKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYY 289 (468)
Q Consensus 234 t--~~~~~~di~~~l~~~-l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~ 289 (468)
+ .+|-.+-| ..+.++ .-..++..+|.|++|...+.+|+..|..+++++...+...
T Consensus 103 ~~E~~Dg~D~I-~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 103 SREAEDGYDTI-EWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred cccccchhHHH-HHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 3 33444444 344332 2336899999999999999999999999999998887654
|
|
| >COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.87 E-value=4.6e-05 Score=74.07 Aligned_cols=102 Identities=15% Similarity=0.107 Sum_probs=72.6
Q ss_pred CeEEEEecCCCCccchhhhhhhccccCCCcce---EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceEEEE
Q 012188 182 RDTLFVKTQGPSAFWTETLFPNFSSASKSTYR---LFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIV 258 (468)
Q Consensus 182 p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~---Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i~lv 258 (468)
-+++++||.+....-+..+...+. ..|+. ++.+++++- ....+ .....+++...+ ..++...+.+++.++
T Consensus 60 ~pivlVhG~~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~-~~~~~--~~~~~~ql~~~V-~~~l~~~ga~~v~Li 132 (336)
T COG1075 60 EPIVLVHGLGGGYGNFLPLDYRLA---ILGWLTNGVYAFELSGG-DGTYS--LAVRGEQLFAYV-DEVLAKTGAKKVNLI 132 (336)
T ss_pred ceEEEEccCcCCcchhhhhhhhhc---chHHHhccccccccccc-CCCcc--ccccHHHHHHHH-HHHHhhcCCCceEEE
Confidence 389999997554443322333333 35666 888888865 22111 223455555666 577778888999999
Q ss_pred EEcccHHHHHHHHHhCC--CccceEEEecCCCCC
Q 012188 259 AHSLGCILALALAVKHP--GSVKSLTLLAPPYYP 290 (468)
Q Consensus 259 GhS~Gg~ial~~a~~~p--~~v~~lVl~~p~~~~ 290 (468)
||||||.++..++..++ .+|+.++.++++-..
T Consensus 133 gHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~G 166 (336)
T COG1075 133 GHSMGGLDSRYYLGVLGGANRVASVVTLGTPHHG 166 (336)
T ss_pred eecccchhhHHHHhhcCccceEEEEEEeccCCCC
Confidence 99999999999999988 899999999987654
|
|
| >KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00011 Score=64.38 Aligned_cols=97 Identities=19% Similarity=0.388 Sum_probs=67.4
Q ss_pred CeEEEEecCCCCcc---chhhhhhhccccCCCcceEEEECCC----CCCCCCCCCCCCCCHHHHHHHHHHHHhcccCC--
Q 012188 182 RDTLFVKTQGPSAF---WTETLFPNFSSASKSTYRLFAIDLL----GFGRSPKPTDSLYTVREHLDMIEKSVIEPNKV-- 252 (468)
Q Consensus 182 p~vl~lHG~g~s~~---~~~~~~~~L~~~~~~gy~Via~D~~----G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~-- 252 (468)
..|||+-|.+..-. +...+...+- +.+|.++-+.++ |+|. .++.+.++|+ ..++++++.
T Consensus 37 ~~vvfiGGLgdgLl~~~y~~~L~~~ld---e~~wslVq~q~~Ssy~G~Gt--------~slk~D~edl-~~l~~Hi~~~~ 104 (299)
T KOG4840|consen 37 VKVVFIGGLGDGLLICLYTTMLNRYLD---ENSWSLVQPQLRSSYNGYGT--------FSLKDDVEDL-KCLLEHIQLCG 104 (299)
T ss_pred EEEEEEcccCCCccccccHHHHHHHHh---hccceeeeeecccccccccc--------ccccccHHHH-HHHHHHhhccC
Confidence 45888888776322 3333333333 589999999876 3443 4677778888 677776653
Q ss_pred --ceEEEEEEcccHHHHHHHHHh--CCCccceEEEecCCCCC
Q 012188 253 --KSFHIVAHSLGCILALALAVK--HPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 253 --~~i~lvGhS~Gg~ial~~a~~--~p~~v~~lVl~~p~~~~ 290 (468)
..++++|||-|+.-.+.|... .|..+++.|+.+|+...
T Consensus 105 fSt~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDr 146 (299)
T KOG4840|consen 105 FSTDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDR 146 (299)
T ss_pred cccceEEEecCccchHHHHHHHhccchHHHHHHHHhCccchh
Confidence 389999999999888877732 45678888998887643
|
|
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.0038 Score=62.72 Aligned_cols=59 Identities=8% Similarity=0.117 Sum_probs=48.0
Q ss_pred CCcEEEEeeCCCCccChhhHHHHHHhCC------------------------C-CeEEEecCCCccccccCcHHHHHHHH
Q 012188 397 KCDVNVFHGEDDELIPVECSYNVQRKIP------------------------R-ARVKVIEKKDHITIVVGRQKTFAREL 451 (468)
Q Consensus 397 ~~PvLii~G~~D~~vp~~~~~~l~~~~p------------------------~-~~l~~i~~~gH~~~~~e~p~~~~~~i 451 (468)
.++||+..|+.|.+++....+.+.+.+. + .++..+.++||++. .+|++..+.+
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp--~qP~~al~m~ 428 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE--YLPEESSIMF 428 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC--cCHHHHHHHH
Confidence 5899999999999999877776666542 2 35566788999994 6999999999
Q ss_pred HHHHhh
Q 012188 452 EEIWRS 457 (468)
Q Consensus 452 ~~fl~~ 457 (468)
.+|+..
T Consensus 429 ~~fi~~ 434 (437)
T PLN02209 429 QRWISG 434 (437)
T ss_pred HHHHcC
Confidence 999964
|
|
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.0044 Score=62.25 Aligned_cols=59 Identities=12% Similarity=0.126 Sum_probs=47.9
Q ss_pred CCcEEEEeeCCCCccChhhHHHHHHhCC------------------------C-CeEEEecCCCccccccCcHHHHHHHH
Q 012188 397 KCDVNVFHGEDDELIPVECSYNVQRKIP------------------------R-ARVKVIEKKDHITIVVGRQKTFAREL 451 (468)
Q Consensus 397 ~~PvLii~G~~D~~vp~~~~~~l~~~~p------------------------~-~~l~~i~~~gH~~~~~e~p~~~~~~i 451 (468)
.++||+..|+.|.++|.-..+.+.+.+. + .++.++-++||++. .+|+...+.+
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp--~qP~~al~m~ 424 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE--YRPNETFIMF 424 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC--CCHHHHHHHH
Confidence 5899999999999999887776665442 1 34566788999995 5899999999
Q ss_pred HHHHhh
Q 012188 452 EEIWRS 457 (468)
Q Consensus 452 ~~fl~~ 457 (468)
..|++.
T Consensus 425 ~~Fi~~ 430 (433)
T PLN03016 425 QRWISG 430 (433)
T ss_pred HHHHcC
Confidence 999965
|
|
| >PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae | Back alignment and domain information |
|---|
Probab=97.77 E-value=1.7e-05 Score=73.95 Aligned_cols=51 Identities=22% Similarity=0.288 Sum_probs=39.8
Q ss_pred HHHHHHHhcccCCc--eEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCC
Q 012188 240 DMIEKSVIEPNKVK--SFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 240 ~di~~~l~~~l~~~--~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~ 290 (468)
++|.-.+.+++... +..|.|+||||+.|+.++.+||+.+.+++.++|....
T Consensus 100 ~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 100 EELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDP 152 (251)
T ss_dssp THHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESET
T ss_pred ccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccccc
Confidence 34433444455543 2799999999999999999999999999999976544
|
; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D .... |
| >KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.0061 Score=60.89 Aligned_cols=70 Identities=9% Similarity=0.170 Sum_probs=51.9
Q ss_pred HHHhhccCCCcEEEEeeCCCCccChhhHHHHHHhC---------C----------------CCeEEEecCCCccccccCc
Q 012188 389 LDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKI---------P----------------RARVKVIEKKDHITIVVGR 443 (468)
Q Consensus 389 ~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~---------p----------------~~~l~~i~~~gH~~~~~e~ 443 (468)
....+..-..+++|..|+.|-++|.-..+.+.+.+ | +..+..+.|+||++.. .+
T Consensus 355 ~~~~~~~~~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~-~~ 433 (454)
T KOG1282|consen 355 HKKLIASGGYRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPY-DK 433 (454)
T ss_pred HHHHhhcCceEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCC-CC
Confidence 33333433489999999999999987766654332 1 1234678899999997 89
Q ss_pred HHHHHHHHHHHHhhcC
Q 012188 444 QKTFARELEEIWRSSS 459 (468)
Q Consensus 444 p~~~~~~i~~fl~~~~ 459 (468)
|+.....+..|+....
T Consensus 434 p~~al~m~~~fl~g~~ 449 (454)
T KOG1282|consen 434 PESALIMFQRFLNGQP 449 (454)
T ss_pred cHHHHHHHHHHHcCCC
Confidence 9999999999997643
|
|
| >cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00015 Score=74.75 Aligned_cols=118 Identities=14% Similarity=0.083 Sum_probs=72.0
Q ss_pred CCceeEEEecC-------CCCeEEEEecCCCCccchhh-hhhhccccCCC-cceEEEECCC----CCCCCCCC-CCCCCC
Q 012188 169 CDCKFCTCWSS-------SSRDTLFVKTQGPSAFWTET-LFPNFSSASKS-TYRLFAIDLL----GFGRSPKP-TDSLYT 234 (468)
Q Consensus 169 ~~~~~~~~~~~-------~~p~vl~lHG~g~s~~~~~~-~~~~L~~~~~~-gy~Via~D~~----G~G~S~~~-~~~~~t 234 (468)
-+|+++..|.+ ..|+||++||++........ ....+.. +. ++.|+.+++| |++.+... .....-
T Consensus 76 Edcl~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~~~~~~~~~~--~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g 153 (493)
T cd00312 76 EDCLYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGSLYPGDGLAR--EGDNVIVVSINYRLGVLGFLSTGDIELPGNYG 153 (493)
T ss_pred CcCCeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCCCCChHHHHh--cCCCEEEEEecccccccccccCCCCCCCcchh
Confidence 35666666632 34889999997642111100 1122221 12 4999999999 34333221 112345
Q ss_pred HHHHHHHHHHHHh---cccCC--ceEEEEEEcccHHHHHHHHHh--CCCccceEEEecCCCC
Q 012188 235 VREHLDMIEKSVI---EPNKV--KSFHIVAHSLGCILALALAVK--HPGSVKSLTLLAPPYY 289 (468)
Q Consensus 235 ~~~~~~di~~~l~---~~l~~--~~i~lvGhS~Gg~ial~~a~~--~p~~v~~lVl~~p~~~ 289 (468)
+.|....+ +.+. +.+|. ++|.|+|+|.||..+..++.. .+..++++|+.++...
T Consensus 154 ~~D~~~al-~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 154 LKDQRLAL-KWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred HHHHHHHH-HHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 66666666 3443 34554 589999999999999887776 2457999999986554
|
) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| >COG4782 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00018 Score=68.05 Aligned_cols=108 Identities=17% Similarity=0.127 Sum_probs=70.0
Q ss_pred CCCCeEEEEecCCCCccch-hhhhhhccccCCCcceEEEECCCCCCCCCC----CCCCCCCHHHHHHHHHHHHhcccCCc
Q 012188 179 SSSRDTLFVKTQGPSAFWT-ETLFPNFSSASKSTYRLFAIDLLGFGRSPK----PTDSLYTVREHLDMIEKSVIEPNKVK 253 (468)
Q Consensus 179 ~~~p~vl~lHG~g~s~~~~-~~~~~~L~~~~~~gy~Via~D~~G~G~S~~----~~~~~~t~~~~~~di~~~l~~~l~~~ 253 (468)
..+..+||+||+..+-.-. +..... .+..+.....+.+-||--|.--. .....|+-.++...| +.+.+..+.+
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI-~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~l-r~La~~~~~~ 191 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQI-VHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLL-RYLATDKPVK 191 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHH-HhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHH-HHHHhCCCCc
Confidence 4467899999987643211 011111 11223566778888887665421 111345666666666 6777788889
Q ss_pred eEEEEEEcccHHHHHHHHHh--------CCCccceEEEecCCC
Q 012188 254 SFHIVAHSLGCILALALAVK--------HPGSVKSLTLLAPPY 288 (468)
Q Consensus 254 ~i~lvGhS~Gg~ial~~a~~--------~p~~v~~lVl~~p~~ 288 (468)
+++|++||||.++++....+ .+.+++-+|+.+|-.
T Consensus 192 ~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDi 234 (377)
T COG4782 192 RIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDI 234 (377)
T ss_pred eEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCC
Confidence 99999999999999887654 234577788877654
|
|
| >PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.64 E-value=9.2e-05 Score=75.04 Aligned_cols=81 Identities=17% Similarity=0.114 Sum_probs=57.1
Q ss_pred CcceEEEECCCCCCCCCCCCC------CCCCHHHHHHHHHHHHhccc-------CCceEEEEEEcccHHHHHHHHHhCCC
Q 012188 210 STYRLFAIDLLGFGRSPKPTD------SLYTVREHLDMIEKSVIEPN-------KVKSFHIVAHSLGCILALALAVKHPG 276 (468)
Q Consensus 210 ~gy~Via~D~~G~G~S~~~~~------~~~t~~~~~~di~~~l~~~l-------~~~~i~lvGhS~Gg~ial~~a~~~p~ 276 (468)
-|--++++++|-+|+|....+ ...+.++.++|+ +.+++.+ ...|++++|-|+||.+|..+-.+||+
T Consensus 58 ~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~-a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~ 136 (434)
T PF05577_consen 58 FGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADL-AYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPH 136 (434)
T ss_dssp HTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHH-HHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TT
T ss_pred cCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHH-HHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCC
Confidence 477899999999999953321 456888888888 4655432 22489999999999999999999999
Q ss_pred ccceEEEecCCCCCC
Q 012188 277 SVKSLTLLAPPYYPV 291 (468)
Q Consensus 277 ~v~~lVl~~p~~~~~ 291 (468)
.|.+.+..++|....
T Consensus 137 ~~~ga~ASSapv~a~ 151 (434)
T PF05577_consen 137 LFDGAWASSAPVQAK 151 (434)
T ss_dssp T-SEEEEET--CCHC
T ss_pred eeEEEEeccceeeee
Confidence 999999999887543
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C. |
| >KOG3967 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00034 Score=60.83 Aligned_cols=108 Identities=25% Similarity=0.402 Sum_probs=72.4
Q ss_pred CCCeEEEEecCCC--Cccchh-----------hhhhhccccCCCcceEEEECCCC---CCCC-CCCCCCCCCHHHHHHHH
Q 012188 180 SSRDTLFVKTQGP--SAFWTE-----------TLFPNFSSASKSTYRLFAIDLLG---FGRS-PKPTDSLYTVREHLDMI 242 (468)
Q Consensus 180 ~~p~vl~lHG~g~--s~~~~~-----------~~~~~L~~~~~~gy~Via~D~~G---~G~S-~~~~~~~~t~~~~~~di 242 (468)
++..+|+|||.|. ...|.+ ..+|.+....+.||.|+..+.-- +-.+ ..|.....+..+++.-+
T Consensus 100 ~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yv 179 (297)
T KOG3967|consen 100 PQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYV 179 (297)
T ss_pred ccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHH
Confidence 3457999999876 112322 23455555556899999987541 1111 22222334666666555
Q ss_pred HHHHhcccCCceEEEEEEcccHHHHHHHHHhCCC--ccceEEEecCC
Q 012188 243 EKSVIEPNKVKSFHIVAHSLGCILALALAVKHPG--SVKSLTLLAPP 287 (468)
Q Consensus 243 ~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~--~v~~lVl~~p~ 287 (468)
-..++.....+.+++++||+||...+.+..++|+ +|.++.+.+.+
T Consensus 180 w~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 180 WKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred HHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 4456666677899999999999999999999985 67788887766
|
|
| >PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.0015 Score=63.39 Aligned_cols=63 Identities=13% Similarity=0.225 Sum_probs=53.5
Q ss_pred ccCCCcEEEEeeCCCCccChhhHHHHHHhCCCC-eEEEecCCCccccccCcHHHHHHHHHHHHhhcCC
Q 012188 394 NHVKCDVNVFHGEDDELIPVECSYNVQRKIPRA-RVKVIEKKDHITIVVGRQKTFARELEEIWRSSSG 460 (468)
Q Consensus 394 ~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~~-~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~~ 460 (468)
.++++|.++|.|..|++..+..+..+...+|+- .+..+|+++|.... ..+.+.+..|+.....
T Consensus 259 ~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~----~~~~~~l~~f~~~~~~ 322 (367)
T PF10142_consen 259 DRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG----SDVVQSLRAFYNRIQN 322 (367)
T ss_pred HhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch----HHHHHHHHHHHHHHHc
Confidence 466999999999999999999999999999965 67888999999763 6777888888876433
|
Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily. |
| >KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00031 Score=67.25 Aligned_cols=114 Identities=14% Similarity=0.096 Sum_probs=76.1
Q ss_pred EecCCCCeEEEEecCCCCccchhhhhhhccccC-CCcceEEEECCCCCCCCCCCCC---------CCCCHHHHHHHHHHH
Q 012188 176 CWSSSSRDTLFVKTQGPSAFWTETLFPNFSSAS-KSTYRLFAIDLLGFGRSPKPTD---------SLYTVREHLDMIEKS 245 (468)
Q Consensus 176 ~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~-~~gy~Via~D~~G~G~S~~~~~---------~~~t~~~~~~di~~~ 245 (468)
-|.+++.||+|.-|.-+.-.|+..-.-.+-+.+ +.+--++..++|-+|+|-.-.. +..+.++-++|. +.
T Consensus 75 fw~~g~gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADf-A~ 153 (492)
T KOG2183|consen 75 FWKKGEGPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADF-AE 153 (492)
T ss_pred cccCCCCceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHH-HH
Confidence 345555789999998775444433222222221 2456788999999999943221 223455555555 34
Q ss_pred Hhcc----cCC--ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCC
Q 012188 246 VIEP----NKV--KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 246 l~~~----l~~--~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~ 290 (468)
++.. ++. .+++.+|-|+||++|..+=.+||..|.|....+.|...
T Consensus 154 ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPvl~ 204 (492)
T KOG2183|consen 154 LLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPVLY 204 (492)
T ss_pred HHHHHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCceEe
Confidence 4433 332 48999999999999999999999999998888776544
|
|
| >PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00018 Score=67.73 Aligned_cols=88 Identities=15% Similarity=0.122 Sum_probs=58.0
Q ss_pred CCeEEEEecCCCCccch-------hhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHH---HHHHhccc
Q 012188 181 SRDTLFVKTQGPSAFWT-------ETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMI---EKSVIEPN 250 (468)
Q Consensus 181 ~p~vl~lHG~g~s~~~~-------~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di---~~~l~~~l 250 (468)
+.-||+.-|.+..-... ..+..... +.+-+|+.+++||.|.|.++.. .++++.+- .+.+.++.
T Consensus 137 ~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak---~~~aNvl~fNYpGVg~S~G~~s----~~dLv~~~~a~v~yL~d~~ 209 (365)
T PF05677_consen 137 QRWILVSNGNGECYENRAMLDYKDDWIQRFAK---ELGANVLVFNYPGVGSSTGPPS----RKDLVKDYQACVRYLRDEE 209 (365)
T ss_pred CcEEEEEcCChHHhhhhhhhccccHHHHHHHH---HcCCcEEEECCCccccCCCCCC----HHHHHHHHHHHHHHHHhcc
Confidence 44688888877532210 11111111 3689999999999999987763 45555544 24555432
Q ss_pred -C--CceEEEEEEcccHHHHHHHHHhCC
Q 012188 251 -K--VKSFHIVAHSLGCILALALAVKHP 275 (468)
Q Consensus 251 -~--~~~i~lvGhS~Gg~ial~~a~~~p 275 (468)
| .+.+++.|||+||.++..+..++.
T Consensus 210 ~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~ 237 (365)
T PF05677_consen 210 QGPKAKNIILYGHSLGGGVQAEALKKEV 237 (365)
T ss_pred cCCChheEEEeeccccHHHHHHHHHhcc
Confidence 3 368999999999999888666653
|
|
| >COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.55 E-value=4.2e-05 Score=72.81 Aligned_cols=64 Identities=17% Similarity=0.282 Sum_probs=51.1
Q ss_pred cCC-CcEEEEeeCCCCccChhhHHHHHHhCCC--CeEEEecCCCccccccCcHH--HHHHHHHHHHhhc
Q 012188 395 HVK-CDVNVFHGEDDELIPVECSYNVQRKIPR--ARVKVIEKKDHITIVVGRQK--TFARELEEIWRSS 458 (468)
Q Consensus 395 ~i~-~PvLii~G~~D~~vp~~~~~~l~~~~p~--~~l~~i~~~gH~~~~~e~p~--~~~~~i~~fl~~~ 458 (468)
.+. .|+|++||.+|..+|...+..++...+. .+..++++++|.......+. +..+.+.+|+.+.
T Consensus 229 ~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 229 KISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred hcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 444 7999999999999999999999888765 57888899999988523332 6788888888763
|
|
| >PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00018 Score=65.47 Aligned_cols=88 Identities=14% Similarity=0.108 Sum_probs=43.6
Q ss_pred CeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH---HHhcccCC--ceEE
Q 012188 182 RDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEK---SVIEPNKV--KSFH 256 (468)
Q Consensus 182 p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~---~l~~~l~~--~~i~ 256 (468)
-.|||+||+.++..-+..+-..+... .+.+.-..+...++-..... ....++..++.+.. ..++.... .++.
T Consensus 5 hLvV~vHGL~G~~~d~~~~~~~l~~~-~~~~~~~~i~~~~~~~n~~~--T~~gI~~~g~rL~~eI~~~~~~~~~~~~~Is 81 (217)
T PF05057_consen 5 HLVVFVHGLWGNPADMRYLKNHLEKI-PEDLPNARIVVLGYSNNEFK--TFDGIDVCGERLAEEILEHIKDYESKIRKIS 81 (217)
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHh-hhhcchhhhhhhcccccccc--cchhhHHHHHHHHHHHHHhccccccccccce
Confidence 46999999887655433343444310 01221111122222111111 11234444443322 33333333 4899
Q ss_pred EEEEcccHHHHHHHHH
Q 012188 257 IVAHSLGCILALALAV 272 (468)
Q Consensus 257 lvGhS~Gg~ial~~a~ 272 (468)
+|||||||.++-.+..
T Consensus 82 fIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 82 FIGHSLGGLIARYALG 97 (217)
T ss_pred EEEecccHHHHHHHHH
Confidence 9999999999876655
|
|
| >PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.016 Score=55.98 Aligned_cols=59 Identities=12% Similarity=0.126 Sum_probs=47.3
Q ss_pred CCcEEEEeeCCCCccChhhHHHHHHhCC------------------------C-CeEEEecCCCccccccCcHHHHHHHH
Q 012188 397 KCDVNVFHGEDDELIPVECSYNVQRKIP------------------------R-ARVKVIEKKDHITIVVGRQKTFAREL 451 (468)
Q Consensus 397 ~~PvLii~G~~D~~vp~~~~~~l~~~~p------------------------~-~~l~~i~~~gH~~~~~e~p~~~~~~i 451 (468)
.++|||..|+.|.++|.-..+.+.+.+. + .++.++.++||+++ .+|+...+.+
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~--~qP~~al~m~ 310 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE--YRPNETFIMF 310 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC--cCHHHHHHHH
Confidence 5899999999999999877666655442 1 35566778999995 5999999999
Q ss_pred HHHHhh
Q 012188 452 EEIWRS 457 (468)
Q Consensus 452 ~~fl~~ 457 (468)
..|+..
T Consensus 311 ~~fi~~ 316 (319)
T PLN02213 311 QRWISG 316 (319)
T ss_pred HHHHcC
Confidence 999965
|
|
| >KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00055 Score=70.58 Aligned_cols=107 Identities=20% Similarity=0.219 Sum_probs=59.4
Q ss_pred cCCCCeEEEEecCCCCccchhhhhhhcc-------------ccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHH--
Q 012188 178 SSSSRDTLFVKTQGPSAFWTETLFPNFS-------------SASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMI-- 242 (468)
Q Consensus 178 ~~~~p~vl~lHG~g~s~~~~~~~~~~L~-------------~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di-- 242 (468)
..++-||||++|..|+...-+.+..... ......|+.+++|+-+ +-..-...++.+.++-+
T Consensus 86 elsGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnE----e~tAm~G~~l~dQtEYV~d 161 (973)
T KOG3724|consen 86 ELSGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNE----EFTAMHGHILLDQTEYVND 161 (973)
T ss_pred cCCCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccc----hhhhhccHhHHHHHHHHHH
Confidence 3456799999998774332211111111 1122567888888765 00001123455444433
Q ss_pred -HHHHhcccC---------CceEEEEEEcccHHHHHHHHHh---CCCccceEEEecCCC
Q 012188 243 -EKSVIEPNK---------VKSFHIVAHSLGCILALALAVK---HPGSVKSLTLLAPPY 288 (468)
Q Consensus 243 -~~~l~~~l~---------~~~i~lvGhS~Gg~ial~~a~~---~p~~v~~lVl~~p~~ 288 (468)
...+++.+. ...++++||||||.+|...+.. .++.|.-++-.+.|.
T Consensus 162 AIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH 220 (973)
T KOG3724|consen 162 AIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPH 220 (973)
T ss_pred HHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcc
Confidence 244444332 2359999999999999876643 244566666666554
|
|
| >KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0025 Score=64.54 Aligned_cols=107 Identities=13% Similarity=0.074 Sum_probs=73.8
Q ss_pred CCCCeEEEEecCCC---CccchhhhhhhccccCCCcceEEEECCCCCCC---CCCCC----CCCCCHHHHHHHHHHHHhc
Q 012188 179 SSSRDTLFVKTQGP---SAFWTETLFPNFSSASKSTYRLFAIDLLGFGR---SPKPT----DSLYTVREHLDMIEKSVIE 248 (468)
Q Consensus 179 ~~~p~vl~lHG~g~---s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~---S~~~~----~~~~t~~~~~~di~~~l~~ 248 (468)
+++|.+|+.+|.-+ ...|...-. .++..|......|.||=|. +-... ....++.|+.... ..+++
T Consensus 468 g~~P~LLygYGay~isl~p~f~~srl----~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~A-eyLve 542 (712)
T KOG2237|consen 468 GSKPLLLYGYGAYGISLDPSFRASRL----SLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACA-EYLVE 542 (712)
T ss_pred CCCceEEEEecccceeecccccccee----EEEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHH-HHHHH
Confidence 45677777777433 122332111 2334899999999999544 32211 1456888888888 46665
Q ss_pred c--cCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCC
Q 012188 249 P--NKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 249 ~--l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~ 290 (468)
. ....+..+.|.|.||.++-.++..+|+.+.++|+-.|....
T Consensus 543 ~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDv 586 (712)
T KOG2237|consen 543 NGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDV 586 (712)
T ss_pred cCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceeh
Confidence 4 33468999999999999999999999999999987776543
|
|
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.01 Score=60.76 Aligned_cols=108 Identities=13% Similarity=0.078 Sum_probs=75.3
Q ss_pred cCCCCeEEEEecCCCCc---cchhhhhhhccccCCCcceEEEECCCCCCCCC-------CCCCCCCCHHHHHHHHHHHHh
Q 012188 178 SSSSRDTLFVKTQGPSA---FWTETLFPNFSSASKSTYRLFAIDLLGFGRSP-------KPTDSLYTVREHLDMIEKSVI 247 (468)
Q Consensus 178 ~~~~p~vl~lHG~g~s~---~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~-------~~~~~~~t~~~~~~di~~~l~ 247 (468)
.+++|.+|+.-|.-+.. .+. ...| .++.+|+-.....-||=|.-. +......|+.|+++.. +.|+
T Consensus 445 ~g~~p~lLygYGaYG~s~~p~Fs---~~~l-SLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a-~~Lv 519 (682)
T COG1770 445 DGSAPLLLYGYGAYGISMDPSFS---IARL-SLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAA-RHLV 519 (682)
T ss_pred CCCCcEEEEEeccccccCCcCcc---ccee-eeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHH-HHHH
Confidence 45667777777733322 222 2223 244589887777888855431 1112456899999888 5666
Q ss_pred cc-cC-CceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCC
Q 012188 248 EP-NK-VKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 248 ~~-l~-~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~ 290 (468)
+. ++ .+.++++|-|.||++.-..+...|+.++++|+--|....
T Consensus 520 ~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDv 564 (682)
T COG1770 520 KEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDV 564 (682)
T ss_pred HcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccch
Confidence 54 33 358999999999999999999999999999998887654
|
|
| >PLN02606 palmitoyl-protein thioesterase | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.036 Score=52.05 Aligned_cols=103 Identities=17% Similarity=0.172 Sum_probs=61.7
Q ss_pred CCeEEEEecCCCC--ccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhc--ccCCceEE
Q 012188 181 SRDTLFVKTQGPS--AFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIE--PNKVKSFH 256 (468)
Q Consensus 181 ~p~vl~lHG~g~s--~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~--~l~~~~i~ 256 (468)
..|||+.||.|.+ ..-...+...+.+ ..++-+..+. .|-|.. ..-...+.+.++.+...+.. .+. +-+.
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~--~~~~pg~~v~-ig~~~~---~s~~~~~~~Qv~~vce~l~~~~~L~-~G~n 98 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLIN--HSGYPGTCVE-IGNGVQ---DSLFMPLRQQASIACEKIKQMKELS-EGYN 98 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHh--CCCCCeEEEE-ECCCcc---cccccCHHHHHHHHHHHHhcchhhc-CceE
Confidence 3589999999843 2222234444421 1233333332 232221 11124566666666433332 232 3599
Q ss_pred EEEEcccHHHHHHHHHhCCC--ccceEEEecCCCCC
Q 012188 257 IVAHSLGCILALALAVKHPG--SVKSLTLLAPPYYP 290 (468)
Q Consensus 257 lvGhS~Gg~ial~~a~~~p~--~v~~lVl~~p~~~~ 290 (468)
++|+|.||.++-.++.+.|+ .|+.+|-++++-..
T Consensus 99 aIGfSQGglflRa~ierc~~~p~V~nlISlggph~G 134 (306)
T PLN02606 99 IVAESQGNLVARGLIEFCDNAPPVINYVSLGGPHAG 134 (306)
T ss_pred EEEEcchhHHHHHHHHHCCCCCCcceEEEecCCcCC
Confidence 99999999999999999987 49999999976543
|
|
| >KOG3101 consensus Esterase D [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0036 Score=54.69 Aligned_cols=107 Identities=21% Similarity=0.282 Sum_probs=64.2
Q ss_pred CCeEEEEecCCCCcc-ch-hhhhhhccccCCCcceEEEECC--CCC---CCCCCC----C---------C---CCCCHHH
Q 012188 181 SRDTLFVKTQGPSAF-WT-ETLFPNFSSASKSTYRLFAIDL--LGF---GRSPKP----T---------D---SLYTVRE 237 (468)
Q Consensus 181 ~p~vl~lHG~g~s~~-~~-~~~~~~L~~~~~~gy~Via~D~--~G~---G~S~~~----~---------~---~~~t~~~ 237 (468)
-|++.++-|...... +. ...+... ..+.|+.|+++|- ||. |+++.- . . ..|.+-+
T Consensus 44 ~P~lf~LSGLTCT~~Nfi~Ksg~qq~--As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYd 121 (283)
T KOG3101|consen 44 CPVLFYLSGLTCTHENFIEKSGFQQQ--ASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYD 121 (283)
T ss_pred CceEEEecCCcccchhhHhhhhHHHh--HhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHH
Confidence 478888999765322 11 1111111 1247899999994 452 222210 0 0 1123333
Q ss_pred HH-HHHHHHHhc----ccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCC
Q 012188 238 HL-DMIEKSVIE----PNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 238 ~~-~di~~~l~~----~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~ 290 (468)
++ +.+ -.++. .+...++.|.||||||.=|+..+.++|.+.+++-..+|...+
T Consensus 122 Yv~kEL-p~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP 178 (283)
T KOG3101|consen 122 YVVKEL-PQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNP 178 (283)
T ss_pred HHHHHH-HHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCc
Confidence 32 222 23333 123357999999999999999999999999999988887655
|
|
| >COG2272 PnbA Carboxylesterase type B [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0014 Score=64.79 Aligned_cols=114 Identities=16% Similarity=0.172 Sum_probs=72.6
Q ss_pred CCceeEEEecCC-----CCeEEEEecCCC-----CccchhhhhhhccccCCCc-ceEEEECCCC--CCCCCCC-------
Q 012188 169 CDCKFCTCWSSS-----SRDTLFVKTQGP-----SAFWTETLFPNFSSASKST-YRLFAIDLLG--FGRSPKP------- 228 (468)
Q Consensus 169 ~~~~~~~~~~~~-----~p~vl~lHG~g~-----s~~~~~~~~~~L~~~~~~g-y~Via~D~~G--~G~S~~~------- 228 (468)
-+|++.-.|.+. .|++|+|||++. +..+++ -..|+ ++| +-|+.+++|= +|.=+.+
T Consensus 77 EDCL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~yd--gs~La---~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~ 151 (491)
T COG2272 77 EDCLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYD--GSALA---ARGDVVVVSVNYRLGALGFLDLSSLDTEDA 151 (491)
T ss_pred ccceeEEeeccCCCCCCCcEEEEEeccccccCCCcccccC--hHHHH---hcCCEEEEEeCcccccceeeehhhcccccc
Confidence 367888888443 489999999754 222232 12232 466 9999999872 2221110
Q ss_pred CCCCCCHHHHHHHHHHHH---hcccCCc--eEEEEEEcccHHHHHHHHHhCC---CccceEEEecCCCC
Q 012188 229 TDSLYTVREHLDMIEKSV---IEPNKVK--SFHIVAHSLGCILALALAVKHP---GSVKSLTLLAPPYY 289 (468)
Q Consensus 229 ~~~~~t~~~~~~di~~~l---~~~l~~~--~i~lvGhS~Gg~ial~~a~~~p---~~v~~lVl~~p~~~ 289 (468)
..+..-+.|.+..+ +.+ ++++|.+ .|.|+|+|.|++.++.+.+- | ..++++|+.++...
T Consensus 152 ~~~n~Gl~DqilAL-kWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 152 FASNLGLLDQILAL-KWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAAS 218 (491)
T ss_pred ccccccHHHHHHHH-HHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCCC
Confidence 01224566666666 344 4567764 79999999999988876653 4 46888888887764
|
|
| >PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0032 Score=65.63 Aligned_cols=118 Identities=14% Similarity=0.089 Sum_probs=65.8
Q ss_pred CCceeEEEec----C---CCCeEEEEecCCCCccch---hhhhhhccccCCCcceEEEECCC----CCCCCCCCC--CCC
Q 012188 169 CDCKFCTCWS----S---SSRDTLFVKTQGPSAFWT---ETLFPNFSSASKSTYRLFAIDLL----GFGRSPKPT--DSL 232 (468)
Q Consensus 169 ~~~~~~~~~~----~---~~p~vl~lHG~g~s~~~~---~~~~~~L~~~~~~gy~Via~D~~----G~G~S~~~~--~~~ 232 (468)
-+|++.--|. . ..|++|+|||++...... ......+. .+++.-|+.+++| |+-.+.... ...
T Consensus 106 EDCL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~--~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN 183 (535)
T PF00135_consen 106 EDCLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLA--ASKDVIVVTINYRLGAFGFLSLGDLDAPSGN 183 (535)
T ss_dssp S---EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHH--HHHTSEEEEE----HHHHH-BSSSTTSHBST
T ss_pred chHHHHhhhhccccccccccceEEEeecccccCCCcccccccccccc--cCCCEEEEEecccccccccccccccccCchh
Confidence 3667776662 1 248999999986521111 11112221 2479999999998 333221111 134
Q ss_pred CCHHHHHHHHHHHH---hcccCC--ceEEEEEEcccHHHHHHHHHhC--CCccceEEEecCCCC
Q 012188 233 YTVREHLDMIEKSV---IEPNKV--KSFHIVAHSLGCILALALAVKH--PGSVKSLTLLAPPYY 289 (468)
Q Consensus 233 ~t~~~~~~di~~~l---~~~l~~--~~i~lvGhS~Gg~ial~~a~~~--p~~v~~lVl~~p~~~ 289 (468)
+-+.|....+ +.+ +..+|. ++|.|+|||.||..+..+...- ...++++|+.++...
T Consensus 184 ~Gl~Dq~~AL-~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~ 246 (535)
T PF00135_consen 184 YGLLDQRLAL-KWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSAL 246 (535)
T ss_dssp HHHHHHHHHH-HHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TT
T ss_pred hhhhhhHHHH-HHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccccc
Confidence 6677777777 454 445665 4799999999998777766552 358999999998543
|
Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A .... |
| >PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2 | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0089 Score=59.45 Aligned_cols=40 Identities=23% Similarity=0.324 Sum_probs=34.7
Q ss_pred CceEEEEEEcccHHHHHHHHHhCCC------ccceEEEecCCCCCC
Q 012188 252 VKSFHIVAHSLGCILALALAVKHPG------SVKSLTLLAPPYYPV 291 (468)
Q Consensus 252 ~~~i~lvGhS~Gg~ial~~a~~~p~------~v~~lVl~~p~~~~~ 291 (468)
.++++||||||||.++..+....+. .|+++|.+++|....
T Consensus 118 ~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~Gs 163 (389)
T PF02450_consen 118 GKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFGGS 163 (389)
T ss_pred CCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCCCC
Confidence 5899999999999999999888753 599999999987653
|
3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process |
| >COG0627 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0068 Score=57.97 Aligned_cols=59 Identities=27% Similarity=0.277 Sum_probs=43.2
Q ss_pred CCHHHHHH-HHHHHHhcccCC----ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCC
Q 012188 233 YTVREHLD-MIEKSVIEPNKV----KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPV 291 (468)
Q Consensus 233 ~t~~~~~~-di~~~l~~~l~~----~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~ 291 (468)
|.+++++. ++-..+.+.+.. ++-.|+||||||.=|+.+|.+||++++.+...+|...+.
T Consensus 127 ~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 127 YQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred cchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 55555543 331233334332 268999999999999999999999999999999877653
|
|
| >COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.12 Score=47.72 Aligned_cols=274 Identities=12% Similarity=0.148 Sum_probs=136.6
Q ss_pred CCeEEEEecCCCCcc--chhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceEEEE
Q 012188 181 SRDTLFVKTQGPSAF--WTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIV 258 (468)
Q Consensus 181 ~p~vl~lHG~g~s~~--~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i~lv 258 (468)
.|.||++--..+... ...++ +.|- ....|+.-|+----.-+-.. +..+++|+++-+ .+.+..+|.+ .+++
T Consensus 103 dPkvLivapmsGH~aTLLR~TV-~alL----p~~~vyitDW~dAr~Vp~~~-G~FdldDYIdyv-ie~~~~~Gp~-~hv~ 174 (415)
T COG4553 103 DPKVLIVAPMSGHYATLLRGTV-EALL----PYHDVYITDWVDARMVPLEA-GHFDLDDYIDYV-IEMINFLGPD-AHVM 174 (415)
T ss_pred CCeEEEEecccccHHHHHHHHH-HHhc----cccceeEeeccccceeeccc-CCccHHHHHHHH-HHHHHHhCCC-CcEE
Confidence 345666655544322 22222 3333 56788888886533222222 457999999999 6899999965 8888
Q ss_pred EEcccHH-----HHHHHHHhCCCccceEEEecCCCCCCCCCc--------hhhHHHHHhhcCCCCCchhhhhhhhHHHHH
Q 012188 259 AHSLGCI-----LALALAVKHPGSVKSLTLLAPPYYPVPKGA--------QASQYVMRKVAPRRVWPLIAFGASMACWYE 325 (468)
Q Consensus 259 GhS~Gg~-----ial~~a~~~p~~v~~lVl~~p~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (468)
+-+.-+. +++..+...|.....++++++|........ ....|+...+...-.|+...+++..-.-..
T Consensus 175 aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDaR~nPTavN~lA~~k~~~WF~~n~vm~vP~~ypg~gR~VYPGFl 254 (415)
T COG4553 175 AVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDARKNPTAVNELATEKSIEWFRDNVVMQVPPPYPGFGRRVYPGFL 254 (415)
T ss_pred EEecCCchHHHHHHHHHhcCCCCCCceeeeecCccccccCcHHHhHhhhccchHHHHhCeeeecCCCCCCccccccccHH
Confidence 8887664 444444557888899999998876543221 114455554444455554444443322222
Q ss_pred HHhhHHHHHhhc----cchhHHHHHHHHhh-hHHHHHhhhcccc---ccchhHHhhHhHHHhcccccccchHHH----hh
Q 012188 326 HISRTICLLICK----NHRVWEFLAKLVTR-NRIRTFLLEGFFC---HTHNAAWHTLHNIICGTANKLDGYLDA----VR 393 (468)
Q Consensus 326 ~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 393 (468)
.+...+.....+ ...++..+.+.-.. ........+.+.. -.......+...++............+ ..
T Consensus 255 QlagFmsmNldrH~~aH~~~~~~Lv~~D~~~Ae~h~~FYdEYlavmdl~aEfYLqTid~VFqq~~LpkG~~vhrg~~vdp 334 (415)
T COG4553 255 QLAGFMSMNLDRHIDAHKDFFLSLVKNDGDSAEKHREFYDEYLAVMDLTAEFYLQTIDEVFQQHALPKGEMVHRGKPVDP 334 (415)
T ss_pred HhhhHhhcChhhhHHHHHHHHHHHHcccchhHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhcccCCceeecCCcCCh
Confidence 222111111111 11111111100000 0000000000000 000111112222211111100000000 00
Q ss_pred cc-CCCcEEEEeeCCCCccChhhHH---HHHHhCCCC--eEEEecCCCccccccC--cHHHHHHHHHHHHhhcCCCC
Q 012188 394 NH-VKCDVNVFHGEDDELIPVECSY---NVQRKIPRA--RVKVIEKKDHITIVVG--RQKTFARELEEIWRSSSGHE 462 (468)
Q Consensus 394 ~~-i~~PvLii~G~~D~~vp~~~~~---~l~~~~p~~--~l~~i~~~gH~~~~~e--~p~~~~~~i~~fl~~~~~~~ 462 (468)
.. -++-.+-+-|++|.+.-..+.+ .+...+|.. +.+.-+++||+..+.. -.+++.-.|.+|+.+-...+
T Consensus 335 ~~I~~~aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~mk~hy~qp~vGHYGVFnGsrfr~eIvPri~dFI~~~d~~~ 411 (415)
T COG4553 335 TAITNVALFTVEGENDDISGVGQTKAAHDLCSNIPEDMKQHYMQPDVGHYGVFNGSRFREEIVPRIRDFIRRYDRSN 411 (415)
T ss_pred hheeceeEEEeecccccccccchhHHHHHHHhcChHHHHHHhcCCCCCccceeccchHHHHHHHHHHHHHHHhCccc
Confidence 11 1466788999999988766644 455556643 5677799999988732 34777888999998765543
|
|
| >PLN02633 palmitoyl protein thioesterase family protein | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.038 Score=51.99 Aligned_cols=102 Identities=18% Similarity=0.194 Sum_probs=63.7
Q ss_pred CCeEEEEecCCCCccc--hhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhc--ccCCceEE
Q 012188 181 SRDTLFVKTQGPSAFW--TETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIE--PNKVKSFH 256 (468)
Q Consensus 181 ~p~vl~lHG~g~s~~~--~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~--~l~~~~i~ 256 (468)
..|+|+.||.|.+..- -..+...+.+ -.|.-+..+.. |.+ ........+.+.++.+...+.. .+. +-+.
T Consensus 25 ~~P~ViwHG~GD~c~~~g~~~~~~l~~~--~~g~~~~~i~i---g~~-~~~s~~~~~~~Qve~vce~l~~~~~l~-~G~n 97 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATNANFTQLLTN--LSGSPGFCLEI---GNG-VGDSWLMPLTQQAEIACEKVKQMKELS-QGYN 97 (314)
T ss_pred CCCeEEecCCCcccCCchHHHHHHHHHh--CCCCceEEEEE---CCC-ccccceeCHHHHHHHHHHHHhhchhhh-CcEE
Confidence 3589999999874331 1122233321 13555555543 333 1222334666666666433332 232 3599
Q ss_pred EEEEcccHHHHHHHHHhCCC--ccceEEEecCCCC
Q 012188 257 IVAHSLGCILALALAVKHPG--SVKSLTLLAPPYY 289 (468)
Q Consensus 257 lvGhS~Gg~ial~~a~~~p~--~v~~lVl~~p~~~ 289 (468)
++|+|.||.++-.++.+.|+ .|+.+|-++++-.
T Consensus 98 aIGfSQGGlflRa~ierc~~~p~V~nlISlggph~ 132 (314)
T PLN02633 98 IVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHA 132 (314)
T ss_pred EEEEccchHHHHHHHHHCCCCCCcceEEEecCCCC
Confidence 99999999999999999987 5999999997643
|
|
| >COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.016 Score=53.91 Aligned_cols=39 Identities=15% Similarity=0.291 Sum_probs=34.7
Q ss_pred ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCC
Q 012188 253 KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPV 291 (468)
Q Consensus 253 ~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~ 291 (468)
+.-+|.|.|+||.+++..+.+||+.|..++..+|.+...
T Consensus 177 ~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~~ 215 (299)
T COG2382 177 DGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWWT 215 (299)
T ss_pred CCcEEeccccccHHHHHHHhcCchhhceeeccCCccccC
Confidence 457899999999999999999999999999999876553
|
|
| >COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.072 Score=53.15 Aligned_cols=110 Identities=12% Similarity=-0.043 Sum_probs=64.2
Q ss_pred CCeEEEEecCCCCccchhhhhhh---cc------------ccCCCcceEEEEC-CCCCCCCCCCCC-CCCCHHHHHHHHH
Q 012188 181 SRDTLFVKTQGPSAFWTETLFPN---FS------------SASKSTYRLFAID-LLGFGRSPKPTD-SLYTVREHLDMIE 243 (468)
Q Consensus 181 ~p~vl~lHG~g~s~~~~~~~~~~---L~------------~~~~~gy~Via~D-~~G~G~S~~~~~-~~~t~~~~~~di~ 243 (468)
+|.|+.+.|+|+++..+-.+.+. -- ...-..-.++-+| .-|.|.|....+ ...+.....+|++
T Consensus 101 rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D~~ 180 (498)
T COG2939 101 RPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGAGKDVY 180 (498)
T ss_pred CceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhccchhHH
Confidence 68899999999955543323211 00 0001235899999 558999974221 2234444444442
Q ss_pred ---HHHhc---ccCC--ceEEEEEEcccHHHHHHHHHhCCC---ccceEEEecCCCCC
Q 012188 244 ---KSVIE---PNKV--KSFHIVAHSLGCILALALAVKHPG---SVKSLTLLAPPYYP 290 (468)
Q Consensus 244 ---~~l~~---~l~~--~~i~lvGhS~Gg~ial~~a~~~p~---~v~~lVl~~p~~~~ 290 (468)
+.+.+ ++.. .+++|+|-|+||.-+..+|...-+ ..++++++.+....
T Consensus 181 ~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvlig 238 (498)
T COG2939 181 SFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIG 238 (498)
T ss_pred HHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeeec
Confidence 12222 2332 489999999999887777765433 46777777665443
|
|
| >cd00741 Lipase Lipase | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.0068 Score=51.76 Aligned_cols=42 Identities=24% Similarity=0.309 Sum_probs=32.9
Q ss_pred cccCCceEEEEEEcccHHHHHHHHHhCCC----ccceEEEecCCCC
Q 012188 248 EPNKVKSFHIVAHSLGCILALALAVKHPG----SVKSLTLLAPPYY 289 (468)
Q Consensus 248 ~~l~~~~i~lvGhS~Gg~ial~~a~~~p~----~v~~lVl~~p~~~ 289 (468)
...+..+++++|||+||.+|..++..... ....++..+++..
T Consensus 23 ~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~ 68 (153)
T cd00741 23 AQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRV 68 (153)
T ss_pred HHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcc
Confidence 33466899999999999999999888754 5677777776653
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.037 Score=56.10 Aligned_cols=120 Identities=10% Similarity=0.006 Sum_probs=78.0
Q ss_pred CCcCCCCceeEEEec-----CCCCeEEEEecCCC---CccchhhhhhhccccCCCcceEEEECCCCCCCCC------C-C
Q 012188 164 PRWSDCDCKFCTCWS-----SSSRDTLFVKTQGP---SAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSP------K-P 228 (468)
Q Consensus 164 ~r~~d~~~~~~~~~~-----~~~p~vl~lHG~g~---s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~------~-~ 228 (468)
.+..||.++.|.-.. +++|++|+--|+-. ...+.......|. +|...+..+.||=|+=. + .
T Consensus 399 atSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLe----rGg~~v~ANIRGGGEfGp~WH~Aa~k 474 (648)
T COG1505 399 ATSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLE----RGGVFVLANIRGGGEFGPEWHQAGMK 474 (648)
T ss_pred EEcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHh----cCCeEEEEecccCCccCHHHHHHHhh
Confidence 334588888775552 23566655544322 3334444444444 89999999999955431 0 1
Q ss_pred CCCCCCHHHHHHHHHHHHhcc-c-CCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCC
Q 012188 229 TDSLYTVREHLDMIEKSVIEP-N-KVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPY 288 (468)
Q Consensus 229 ~~~~~t~~~~~~di~~~l~~~-l-~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~ 288 (468)
.....-++|++... ..++++ + ..+++.+-|-|-||.+.-....++|+.+.++|+--|..
T Consensus 475 ~nrq~vfdDf~AVa-edLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPll 535 (648)
T COG1505 475 ENKQNVFDDFIAVA-EDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLL 535 (648)
T ss_pred hcchhhhHHHHHHH-HHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchh
Confidence 11334566776666 355443 1 23689999999999999988999999999988876654
|
|
| >KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.0083 Score=59.32 Aligned_cols=112 Identities=14% Similarity=0.113 Sum_probs=76.1
Q ss_pred cCCCCeEEEEec-CCCCccchh-hhhhhccccCCCcceEEEECCCCCCCCCCCCC------CCCCHHHHHHHHHHHHhcc
Q 012188 178 SSSSRDTLFVKT-QGPSAFWTE-TLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD------SLYTVREHLDMIEKSVIEP 249 (468)
Q Consensus 178 ~~~~p~vl~lHG-~g~s~~~~~-~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~------~~~t~~~~~~di~~~l~~~ 249 (468)
.+++|.-|+|-| ++.+..|-. .-...+....+-|-.|+..++|-+|.|....+ ...+..+.+.|+ +.+++.
T Consensus 83 ~~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDl-a~fI~~ 161 (514)
T KOG2182|consen 83 KPGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADL-AEFIKA 161 (514)
T ss_pred cCCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHH-HHHHHH
Confidence 345666666666 333433421 11111211124688999999999999843332 233667777777 566655
Q ss_pred cCC-------ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCC
Q 012188 250 NKV-------KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 250 l~~-------~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~ 290 (468)
+.. .+.+.+|-|+-|.++..+=.+||+.+.+.|..++|...
T Consensus 162 ~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~A 209 (514)
T KOG2182|consen 162 MNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVLA 209 (514)
T ss_pred HHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccceeE
Confidence 432 28999999999999999999999999999999887654
|
|
| >PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.021 Score=55.71 Aligned_cols=61 Identities=20% Similarity=0.257 Sum_probs=45.1
Q ss_pred CCcEEEEeeCCCCccChhhHHHHHHhCC----CCeEEEe-----------cCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 397 KCDVNVFHGEDDELIPVECSYNVQRKIP----RARVKVI-----------EKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 397 ~~PvLii~G~~D~~vp~~~~~~l~~~~p----~~~l~~i-----------~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
++-.+..|+..|..+|.+.-+++.+.+. +++++.+ .+..|.+=+ ..-..|.+++-..|++.
T Consensus 293 ~~~yvsYHs~~D~~~p~~~K~~l~~~l~~lgfda~l~lIkdes~iDGkfIKnl~HGmgi-s~k~Lf~KeLp~~lek~ 368 (403)
T PF11144_consen 293 KIIYVSYHSIKDDLAPAEDKEELYEILKNLGFDATLHLIKDESEIDGKFIKNLEHGMGI-SDKALFKKELPLMLEKL 368 (403)
T ss_pred ceEEEEEeccCCCCCCHHHHHHHHHHHHHcCCCeEEEEecChhhccchheeccccCCCC-CHHHHHHHHhHHHHHHh
Confidence 4556779999999999999888888664 5677777 345787554 56667777777777663
|
|
| >COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.067 Score=51.66 Aligned_cols=85 Identities=14% Similarity=0.097 Sum_probs=60.5
Q ss_pred CCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhc----ccCCceEE
Q 012188 181 SRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIE----PNKVKSFH 256 (468)
Q Consensus 181 ~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~----~l~~~~i~ 256 (468)
.-.-||+-|-|+-....+.+...|+ ++|+.|+.+|-.-|=.|. .+.++.++|+ ..+++ +.+..++.
T Consensus 260 d~~av~~SGDGGWr~lDk~v~~~l~---~~gvpVvGvdsLRYfW~~------rtPe~~a~Dl-~r~i~~y~~~w~~~~~~ 329 (456)
T COG3946 260 DTVAVFYSGDGGWRDLDKEVAEALQ---KQGVPVVGVDSLRYFWSE------RTPEQIAADL-SRLIRFYARRWGAKRVL 329 (456)
T ss_pred ceEEEEEecCCchhhhhHHHHHHHH---HCCCceeeeehhhhhhcc------CCHHHHHHHH-HHHHHHHHHhhCcceEE
Confidence 3455788887776666666777777 699999999965544443 3666677777 45554 46778999
Q ss_pred EEEEcccHHHHHHHHHhCC
Q 012188 257 IVAHSLGCILALALAVKHP 275 (468)
Q Consensus 257 lvGhS~Gg~ial~~a~~~p 275 (468)
|+|+|+|+=+--..-.+.|
T Consensus 330 liGySfGADvlP~~~n~L~ 348 (456)
T COG3946 330 LIGYSFGADVLPFAYNRLP 348 (456)
T ss_pred EEeecccchhhHHHHHhCC
Confidence 9999999977665555544
|
|
| >PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides [] | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.012 Score=49.19 Aligned_cols=38 Identities=34% Similarity=0.344 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHhcccCCceEEEEEEcccHHHHHHHHHhC
Q 012188 236 REHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKH 274 (468)
Q Consensus 236 ~~~~~di~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~ 274 (468)
.+..+.+ ..+.+..+..++.+.|||+||.+|..++...
T Consensus 48 ~~~~~~l-~~~~~~~~~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 48 DQILDAL-KELVEKYPDYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHH-HHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHH-HHHHhcccCccchhhccchHHHHHHHHHHhh
Confidence 3445555 4566677767899999999999999888763
|
Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A .... |
| >PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.0066 Score=56.42 Aligned_cols=104 Identities=13% Similarity=0.156 Sum_probs=52.5
Q ss_pred CeEEEEecCCCCcc---chhhhhhhccccCCCcceEEEECCCCCCCC-CCCCCCCCCHHHHHHHHHHHHhcc---cCCce
Q 012188 182 RDTLFVKTQGPSAF---WTETLFPNFSSASKSTYRLFAIDLLGFGRS-PKPTDSLYTVREHLDMIEKSVIEP---NKVKS 254 (468)
Q Consensus 182 p~vl~lHG~g~s~~---~~~~~~~~L~~~~~~gy~Via~D~~G~G~S-~~~~~~~~t~~~~~~di~~~l~~~---l~~~~ 254 (468)
.|||+.||.|.+.. -...+...+.+. -.|--|..++. |-+.+ +....-...+.+.++.+. ..++. +. +-
T Consensus 6 ~PvViwHGmGD~~~~~~~m~~i~~~i~~~-~PG~yV~si~i-g~~~~~D~~~s~f~~v~~Qv~~vc-~~l~~~p~L~-~G 81 (279)
T PF02089_consen 6 LPVVIWHGMGDSCCNPSSMGSIKELIEEQ-HPGTYVHSIEI-GNDPSEDVENSFFGNVNDQVEQVC-EQLANDPELA-NG 81 (279)
T ss_dssp --EEEE--TT--S--TTTHHHHHHHHHHH-STT--EEE--S-SSSHHHHHHHHHHSHHHHHHHHHH-HHHHH-GGGT-T-
T ss_pred CcEEEEEcCccccCChhHHHHHHHHHHHh-CCCceEEEEEE-CCCcchhhhhhHHHHHHHHHHHHH-HHHhhChhhh-cc
Confidence 48999999987432 112232222211 15777788776 32211 111111124555555553 33332 32 46
Q ss_pred EEEEEEcccHHHHHHHHHhCCC-ccceEEEecCCCC
Q 012188 255 FHIVAHSLGCILALALAVKHPG-SVKSLTLLAPPYY 289 (468)
Q Consensus 255 i~lvGhS~Gg~ial~~a~~~p~-~v~~lVl~~p~~~ 289 (468)
++++|+|-||.++-.++.+.|+ .|+.+|.++++-.
T Consensus 82 ~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~ 117 (279)
T PF02089_consen 82 FNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHM 117 (279)
T ss_dssp EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--TT
T ss_pred eeeeeeccccHHHHHHHHHCCCCCceeEEEecCccc
Confidence 9999999999999999999875 6999999997643
|
Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A. |
| >PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.032 Score=50.78 Aligned_cols=46 Identities=17% Similarity=0.197 Sum_probs=35.9
Q ss_pred HHHhcccCCceEEEEEEcccHHHHHHHHHhC----CCccceEEEecCCCCC
Q 012188 244 KSVIEPNKVKSFHIVAHSLGCILALALAVKH----PGSVKSLTLLAPPYYP 290 (468)
Q Consensus 244 ~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~----p~~v~~lVl~~p~~~~ 290 (468)
..+++..+ +++++.|||.||.+|..++... .++|.+++..++|.+.
T Consensus 76 ~~~~~~~~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~ 125 (224)
T PF11187_consen 76 KKIAKKYP-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFS 125 (224)
T ss_pred HHHHHhCC-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCC
Confidence 34555555 3599999999999999998874 3578899988887655
|
|
| >KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.14 Score=46.78 Aligned_cols=98 Identities=22% Similarity=0.246 Sum_probs=64.9
Q ss_pred CeEEEEecCCCCccc--hhhhhhhccccCCCcceEEEECCCCCC--CCCCCCCCCCCHHHHHHHHHHHHhcccC--CceE
Q 012188 182 RDTLFVKTQGPSAFW--TETLFPNFSSASKSTYRLFAIDLLGFG--RSPKPTDSLYTVREHLDMIEKSVIEPNK--VKSF 255 (468)
Q Consensus 182 p~vl~lHG~g~s~~~--~~~~~~~L~~~~~~gy~Via~D~~G~G--~S~~~~~~~~t~~~~~~di~~~l~~~l~--~~~i 255 (468)
-|+|++||.+.+..- ...+.+.+.+ + .|..|++.|. |-| +| ....+.+.++.+...+. ... .+-+
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~-~-~g~~v~~lei-g~g~~~s-----~l~pl~~Qv~~~ce~v~-~m~~lsqGy 94 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEE-L-PGSPVYCLEI-GDGIKDS-----SLMPLWEQVDVACEKVK-QMPELSQGY 94 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHh-C-CCCeeEEEEe-cCCcchh-----hhccHHHHHHHHHHHHh-cchhccCce
Confidence 579999998874432 3334555543 2 5888899886 444 22 23355666665532222 211 1459
Q ss_pred EEEEEcccHHHHHHHHHhCCC-ccceEEEecCCC
Q 012188 256 HIVAHSLGCILALALAVKHPG-SVKSLTLLAPPY 288 (468)
Q Consensus 256 ~lvGhS~Gg~ial~~a~~~p~-~v~~lVl~~p~~ 288 (468)
.++|.|.||.++-.++..-++ .|+.+|.+++|-
T Consensus 95 nivg~SQGglv~Raliq~cd~ppV~n~ISL~gPh 128 (296)
T KOG2541|consen 95 NIVGYSQGGLVARALIQFCDNPPVKNFISLGGPH 128 (296)
T ss_pred EEEEEccccHHHHHHHHhCCCCCcceeEeccCCc
Confidence 999999999999999988664 589999888764
|
|
| >KOG2521 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.31 Score=47.03 Aligned_cols=64 Identities=13% Similarity=0.188 Sum_probs=51.2
Q ss_pred CCcEEEEeeCCCCccChhhHHHHHHhC--C--CCeEEEecCCCccccccCcHHHHHHHHHHHHhhcCC
Q 012188 397 KCDVNVFHGEDDELIPVECSYNVQRKI--P--RARVKVIEKKDHITIVVGRQKTFARELEEIWRSSSG 460 (468)
Q Consensus 397 ~~PvLii~G~~D~~vp~~~~~~l~~~~--p--~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~~ 460 (468)
..+.+.+.+..|.++|....+++.+.. . +++-+-+.++-|..+....|..+.+...+|+++...
T Consensus 225 ~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~~ 292 (350)
T KOG2521|consen 225 PWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVIS 292 (350)
T ss_pred cccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhccc
Confidence 568899999999999999888875543 2 345555678899888778999999999999988644
|
|
| >COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.024 Score=52.02 Aligned_cols=38 Identities=24% Similarity=0.418 Sum_probs=34.6
Q ss_pred CCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCC
Q 012188 251 KVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPY 288 (468)
Q Consensus 251 ~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~ 288 (468)
..++-.++|||+||.+++.....+|+.+..+++++|..
T Consensus 135 ~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSl 172 (264)
T COG2819 135 NSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSL 172 (264)
T ss_pred CcccceeeeecchhHHHHHHHhcCcchhceeeeecchh
Confidence 34679999999999999999999999999999999865
|
|
| >cd00519 Lipase_3 Lipase (class 3) | Back alignment and domain information |
|---|
Probab=94.87 E-value=0.039 Score=50.57 Aligned_cols=44 Identities=27% Similarity=0.265 Sum_probs=29.9
Q ss_pred HHhcccCCceEEEEEEcccHHHHHHHHHhC-----CCccceEEEecCCC
Q 012188 245 SVIEPNKVKSFHIVAHSLGCILALALAVKH-----PGSVKSLTLLAPPY 288 (468)
Q Consensus 245 ~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~-----p~~v~~lVl~~p~~ 288 (468)
.+++.....++.+.|||+||.+|..++... +..+..+.+-+|..
T Consensus 120 ~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~v 168 (229)
T cd00519 120 SALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRV 168 (229)
T ss_pred HHHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCC
Confidence 344445557899999999999999888753 23455555544443
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants | Back alignment and domain information |
|---|
Probab=94.79 E-value=0.31 Score=44.40 Aligned_cols=87 Identities=14% Similarity=0.106 Sum_probs=49.9
Q ss_pred cchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCC----ceEEEEEEcccHHHHHHH
Q 012188 195 FWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKV----KSFHIVAHSLGCILALAL 270 (468)
Q Consensus 195 ~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~----~~i~lvGhS~Gg~ial~~ 270 (468)
..|+.+.+.|+ ++||.|++.-+.- |.- ...-...-...+-..+ +.+.+..+. -+++-+|||+||-+-+.+
T Consensus 34 itYr~lLe~La---~~Gy~ViAtPy~~-tfD-H~~~A~~~~~~f~~~~-~~L~~~~~~~~~~lP~~~vGHSlGcklhlLi 107 (250)
T PF07082_consen 34 ITYRYLLERLA---DRGYAVIATPYVV-TFD-HQAIAREVWERFERCL-RALQKRGGLDPAYLPVYGVGHSLGCKLHLLI 107 (250)
T ss_pred HHHHHHHHHHH---hCCcEEEEEecCC-CCc-HHHHHHHHHHHHHHHH-HHHHHhcCCCcccCCeeeeecccchHHHHHH
Confidence 35566777777 6899999986642 100 0000000011111112 233333222 267889999999998888
Q ss_pred HHhCCCccceEEEecCC
Q 012188 271 AVKHPGSVKSLTLLAPP 287 (468)
Q Consensus 271 a~~~p~~v~~lVl~~p~ 287 (468)
...++..-++-++++-.
T Consensus 108 ~s~~~~~r~gniliSFN 124 (250)
T PF07082_consen 108 GSLFDVERAGNILISFN 124 (250)
T ss_pred hhhccCcccceEEEecC
Confidence 88877666777887643
|
Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis. |
| >COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.47 E-value=0.14 Score=48.83 Aligned_cols=60 Identities=10% Similarity=0.182 Sum_probs=48.5
Q ss_pred ccCCCcEEEEeeCCCCccChhhHHHHHHhCCCC-eEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 394 NHVKCDVNVFHGEDDELIPVECSYNVQRKIPRA-RVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 394 ~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~~-~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
.++.+|-.|+.|..|.+.++..+.-++..+|+. -+..+|+..|.... ..+.+.+..|+..
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~n----~~i~esl~~flnr 386 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLIN----QFIKESLEPFLNR 386 (507)
T ss_pred hhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhhH----HHHHHHHHHHHHH
Confidence 466899999999999999999999999999986 57888999998653 4555666666654
|
|
| >PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=94.38 E-value=0.087 Score=51.27 Aligned_cols=112 Identities=14% Similarity=0.070 Sum_probs=81.2
Q ss_pred eeEEEecCCCCeEEEEecCCCCcc-chhhhhhhccccCCCcceEEEECCCCCCCCCC-CCC-CCCCHHHHHHHHHHHHhc
Q 012188 172 KFCTCWSSSSRDTLFVKTQGPSAF-WTETLFPNFSSASKSTYRLFAIDLLGFGRSPK-PTD-SLYTVREHLDMIEKSVIE 248 (468)
Q Consensus 172 ~~~~~~~~~~p~vl~lHG~g~s~~-~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~-~~~-~~~t~~~~~~di~~~l~~ 248 (468)
+.....+.+.|+|++.-|.+.+.. ........| +-+-+.+++|-||.|.. |.+ ...++++-+.|. ..+.+
T Consensus 54 vtLlHk~~drPtV~~T~GY~~~~~p~r~Ept~Ll------d~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~-Hri~~ 126 (448)
T PF05576_consen 54 VTLLHKDFDRPTVLYTEGYNVSTSPRRSEPTQLL------DGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQ-HRIVQ 126 (448)
T ss_pred EEEEEcCCCCCeEEEecCcccccCccccchhHhh------ccceEEEEEeeccCCCCCCCCcccccHhHhhHHH-HHHHH
Confidence 333334677899999999876432 111122222 35678999999999953 333 556888888888 46655
Q ss_pred ccC---CceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCC
Q 012188 249 PNK---VKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 249 ~l~---~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~ 290 (468)
.+. .++.+--|-|=||+.++.+-.-||+.|++.|..-.|...
T Consensus 127 A~K~iY~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~~~ 171 (448)
T PF05576_consen 127 AFKPIYPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPNDV 171 (448)
T ss_pred HHHhhccCCceecCcCCCceeEEEEeeeCCCCCCeeeeeeccccc
Confidence 543 368889999999999999999999999999988777543
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ]. |
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.29 E-value=0.71 Score=50.73 Aligned_cols=97 Identities=16% Similarity=0.185 Sum_probs=62.0
Q ss_pred cCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceEEE
Q 012188 178 SSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHI 257 (468)
Q Consensus 178 ~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i~l 257 (468)
..+.|++.|+|-.-+...-.+.+...+ ..|.||.-.-..-...++++.+.-..+.+.+-....+..+
T Consensus 2120 ~se~~~~Ffv~pIEG~tt~l~~la~rl-------------e~PaYglQ~T~~vP~dSies~A~~yirqirkvQP~GPYrl 2186 (2376)
T KOG1202|consen 2120 QSEEPPLFFVHPIEGFTTALESLASRL-------------EIPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQPEGPYRL 2186 (2376)
T ss_pred cccCCceEEEeccccchHHHHHHHhhc-------------CCcchhhhccccCCcchHHHHHHHHHHHHHhcCCCCCeee
Confidence 556799999998766554333333222 2344554322222234777777655445555455578999
Q ss_pred EEEcccHHHHHHHHHhCC--CccceEEEecCC
Q 012188 258 VAHSLGCILALALAVKHP--GSVKSLTLLAPP 287 (468)
Q Consensus 258 vGhS~Gg~ial~~a~~~p--~~v~~lVl~~p~ 287 (468)
+|+|+|+.++..+|.... +....+|++++.
T Consensus 2187 ~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGs 2218 (2376)
T KOG1202|consen 2187 AGYSYGACLAFEMASQLQEQQSPAPLILLDGS 2218 (2376)
T ss_pred eccchhHHHHHHHHHHHHhhcCCCcEEEecCc
Confidence 999999999999987543 345668888864
|
|
| >KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.19 E-value=0.056 Score=53.39 Aligned_cols=87 Identities=17% Similarity=0.160 Sum_probs=55.5
Q ss_pred hhhhhhhccccCCCcce------EEEECCCCCCCCCCCC-CCCCCHHHHHHHHHHHHhcccCCceEEEEEEcccHHHHHH
Q 012188 197 TETLFPNFSSASKSTYR------LFAIDLLGFGRSPKPT-DSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALA 269 (468)
Q Consensus 197 ~~~~~~~L~~~~~~gy~------Via~D~~G~G~S~~~~-~~~~t~~~~~~di~~~l~~~l~~~~i~lvGhS~Gg~ial~ 269 (468)
+..+++.|. .=||. -..+|+|= |.... ..+..+.++...| ...-+..|.+|++||+|||||.+.+.
T Consensus 126 w~~~i~~lv---~~GYe~~~~l~ga~YDwRl---s~~~~e~rd~yl~kLK~~i-E~~~~~~G~kkVvlisHSMG~l~~ly 198 (473)
T KOG2369|consen 126 WHELIENLV---GIGYERGKTLFGAPYDWRL---SYHNSEERDQYLSKLKKKI-ETMYKLNGGKKVVLISHSMGGLYVLY 198 (473)
T ss_pred HHHHHHHHH---hhCcccCceeeccccchhh---ccCChhHHHHHHHHHHHHH-HHHHHHcCCCceEEEecCCccHHHHH
Confidence 344666554 34555 44567663 11111 1223455555555 24455567799999999999999999
Q ss_pred HHHhCCC--------ccceEEEecCCCCC
Q 012188 270 LAVKHPG--------SVKSLTLLAPPYYP 290 (468)
Q Consensus 270 ~a~~~p~--------~v~~lVl~~p~~~~ 290 (468)
+...+++ .+++++-++++...
T Consensus 199 Fl~w~~~~~~~W~~k~I~sfvnig~p~lG 227 (473)
T KOG2369|consen 199 FLKWVEAEGPAWCDKYIKSFVNIGAPWLG 227 (473)
T ss_pred HHhcccccchhHHHHHHHHHHccCchhcC
Confidence 9999887 36777777766544
|
|
| >PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria | Back alignment and domain information |
|---|
Probab=94.11 E-value=0.15 Score=44.33 Aligned_cols=39 Identities=21% Similarity=0.208 Sum_probs=33.5
Q ss_pred CceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCC
Q 012188 252 VKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 252 ~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~ 290 (468)
..++.++|||+|+.++-..+...+..+..+|+++.|...
T Consensus 108 ~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~g 146 (177)
T PF06259_consen 108 DAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGMG 146 (177)
T ss_pred CCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCCC
Confidence 358999999999999998887767889999999987654
|
Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates. |
| >PLN02162 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=93.72 E-value=0.14 Score=50.96 Aligned_cols=35 Identities=26% Similarity=0.366 Sum_probs=26.2
Q ss_pred HHHHHHHHHHhcccCCceEEEEEEcccHHHHHHHHH
Q 012188 237 EHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAV 272 (468)
Q Consensus 237 ~~~~di~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~ 272 (468)
+..+.+ ..++.+....++++.|||+||.+|..+|.
T Consensus 263 ~I~~~L-~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 263 TIRQML-RDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHH-HHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 344455 45566666678999999999999998765
|
|
| >PLN02454 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=93.39 E-value=0.13 Score=50.61 Aligned_cols=35 Identities=37% Similarity=0.410 Sum_probs=25.5
Q ss_pred HHHHHHHHHhcccCCc--eEEEEEEcccHHHHHHHHHh
Q 012188 238 HLDMIEKSVIEPNKVK--SFHIVAHSLGCILALALAVK 273 (468)
Q Consensus 238 ~~~di~~~l~~~l~~~--~i~lvGhS~Gg~ial~~a~~ 273 (468)
+...| ..+++.+... ++++.|||+||.+|+.+|..
T Consensus 212 vl~~V-~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 212 LLAKI-KELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHH-HHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 33444 4566666544 49999999999999998854
|
|
| >PLN00413 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=93.28 E-value=0.19 Score=50.14 Aligned_cols=51 Identities=24% Similarity=0.401 Sum_probs=35.1
Q ss_pred HHHHHHHHHHhcccCCceEEEEEEcccHHHHHHHHHh---C-----CCccceEEEecCCC
Q 012188 237 EHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVK---H-----PGSVKSLTLLAPPY 288 (468)
Q Consensus 237 ~~~~di~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~---~-----p~~v~~lVl~~p~~ 288 (468)
+..+.+ ..+++.....++++.|||+||.+|..+|.. + ..++.+++-.++|-
T Consensus 269 ~i~~~L-k~ll~~~p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PR 327 (479)
T PLN00413 269 TILRHL-KEIFDQNPTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPR 327 (479)
T ss_pred HHHHHH-HHHHHHCCCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCC
Confidence 455566 566777776789999999999999988752 1 12344566655543
|
|
| >KOG1516 consensus Carboxylesterase and related proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.87 E-value=0.64 Score=48.69 Aligned_cols=105 Identities=15% Similarity=0.143 Sum_probs=62.3
Q ss_pred CCeEEEEecCCCCccc---hhhhhhhccccCCCcceEEEECCC----CC---CCCCCCCCCCCCHHHHHHHHHHHHhc--
Q 012188 181 SRDTLFVKTQGPSAFW---TETLFPNFSSASKSTYRLFAIDLL----GF---GRSPKPTDSLYTVREHLDMIEKSVIE-- 248 (468)
Q Consensus 181 ~p~vl~lHG~g~s~~~---~~~~~~~L~~~~~~gy~Via~D~~----G~---G~S~~~~~~~~t~~~~~~di~~~l~~-- 248 (468)
-|++|++||++..... +....+... ...+..-|+.+.+| |+ |.+.. .+.+-+.|++..+ +.+.+
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~-~~~~~VVvVt~~YRLG~lGF~st~d~~~--~gN~gl~Dq~~AL-~wv~~~I 187 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYV-LLLKDVVVVTINYRLGPLGFLSTGDSAA--PGNLGLFDQLLAL-RWVKDNI 187 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhc-cccCCEEEEEecccceeceeeecCCCCC--CCcccHHHHHHHH-HHHHHHH
Confidence 4889999998651111 111111111 11246778888876 32 32222 2456777777777 34443
Q ss_pred -ccCC--ceEEEEEEcccHHHHHHHHHh--CCCccceEEEecCCCC
Q 012188 249 -PNKV--KSFHIVAHSLGCILALALAVK--HPGSVKSLTLLAPPYY 289 (468)
Q Consensus 249 -~l~~--~~i~lvGhS~Gg~ial~~a~~--~p~~v~~lVl~~p~~~ 289 (468)
.+|. +++.|+|||.||..+..+... ....+.++|.+++...
T Consensus 188 ~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~ 233 (545)
T KOG1516|consen 188 PSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNAL 233 (545)
T ss_pred HhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccccc
Confidence 4553 589999999999988776643 1246777777776543
|
|
| >PLN02571 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=92.77 E-value=0.13 Score=50.80 Aligned_cols=37 Identities=35% Similarity=0.420 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHhcccCCc--eEEEEEEcccHHHHHHHHHh
Q 012188 236 REHLDMIEKSVIEPNKVK--SFHIVAHSLGCILALALAVK 273 (468)
Q Consensus 236 ~~~~~di~~~l~~~l~~~--~i~lvGhS~Gg~ial~~a~~ 273 (468)
+++.+++ ..+++.+..+ ++++.|||+||.+|+..|..
T Consensus 208 ~qvl~eV-~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEV-GRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHH-HHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 4566666 5666666543 68999999999999998864
|
|
| >KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=92.77 E-value=6.7 Score=37.14 Aligned_cols=110 Identities=18% Similarity=0.094 Sum_probs=67.6
Q ss_pred CCCeEEEEecCCCCcc----chhhhhhhccccCC------CcceEEEECCC-CCCCCCCCCCCCC--CHHHHHHHHHHHH
Q 012188 180 SSRDTLFVKTQGPSAF----WTETLFPNFSSASK------STYRLFAIDLL-GFGRSPKPTDSLY--TVREHLDMIEKSV 246 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~----~~~~~~~~L~~~~~------~gy~Via~D~~-G~G~S~~~~~~~~--t~~~~~~di~~~l 246 (468)
..|..+.+.|+++++. -++.+-|.=.+.-- +.-.++.+|-| |.|.|.-...+.| +..+.+.|+ ..+
T Consensus 30 ~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl-~~l 108 (414)
T KOG1283|consen 30 ERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKDADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDL-VEL 108 (414)
T ss_pred CCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhhccEEEecCCCcCceeeecCcccccccHHHHHHHH-HHH
Confidence 4577788999877332 12222222110000 24577788865 8888854443333 567777887 455
Q ss_pred hcc-------cCCceEEEEEEcccHHHHHHHHHhCCC---------ccceEEEecCCCCC
Q 012188 247 IEP-------NKVKSFHIVAHSLGCILALALAVKHPG---------SVKSLTLLAPPYYP 290 (468)
Q Consensus 247 ~~~-------l~~~~i~lvGhS~Gg~ial~~a~~~p~---------~v~~lVl~~p~~~~ 290 (468)
++. +.-.+++|+.-|+||-+|..++...-+ .+.+++|-++...+
T Consensus 109 lk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWISP 168 (414)
T KOG1283|consen 109 LKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWISP 168 (414)
T ss_pred HHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccCh
Confidence 543 344689999999999998888764322 46677777765543
|
|
| >PLN02517 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=92.62 E-value=0.13 Score=52.65 Aligned_cols=41 Identities=22% Similarity=0.323 Sum_probs=31.8
Q ss_pred cCCceEEEEEEcccHHHHHHHHHhCC---------------CccceEEEecCCCCC
Q 012188 250 NKVKSFHIVAHSLGCILALALAVKHP---------------GSVKSLTLLAPPYYP 290 (468)
Q Consensus 250 l~~~~i~lvGhS~Gg~ial~~a~~~p---------------~~v~~lVl~~p~~~~ 290 (468)
.+.++++|+||||||.+++.+...-. ..|+++|.++++...
T Consensus 210 nggkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 210 NGGKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred cCCCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheecccccCC
Confidence 44589999999999999998776321 147899999987654
|
|
| >COG2830 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=92.10 E-value=1.4 Score=37.05 Aligned_cols=80 Identities=16% Similarity=0.163 Sum_probs=49.9
Q ss_pred eEEEEecCCCCccchhhhhhhccccCCCcce-EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceEEEEEEc
Q 012188 183 DTLFVKTQGPSAFWTETLFPNFSSASKSTYR-LFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHS 261 (468)
Q Consensus 183 ~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~-Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i~lvGhS 261 (468)
.||++-|||....-...++ +.+++. ++++|+..... +.++.. .+.+.+|++|
T Consensus 13 LIvyFaGwgtpps~v~HLi------lpeN~dl~lcYDY~dl~l-------dfDfsA--------------y~hirlvAwS 65 (214)
T COG2830 13 LIVYFAGWGTPPSAVNHLI------LPENHDLLLCYDYQDLNL-------DFDFSA--------------YRHIRLVAWS 65 (214)
T ss_pred EEEEEecCCCCHHHHhhcc------CCCCCcEEEEeehhhcCc-------ccchhh--------------hhhhhhhhhh
Confidence 7889999887554322221 124554 56677764211 111111 1456789999
Q ss_pred ccHHHHHHHHHhCCCccceEEEecCCCCCC
Q 012188 262 LGCILALALAVKHPGSVKSLTLLAPPYYPV 291 (468)
Q Consensus 262 ~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~ 291 (468)
||-++|-++....+ +++.+.+++...+.
T Consensus 66 MGVwvAeR~lqg~~--lksatAiNGTgLpc 93 (214)
T COG2830 66 MGVWVAERVLQGIR--LKSATAINGTGLPC 93 (214)
T ss_pred HHHHHHHHHHhhcc--ccceeeecCCCCCc
Confidence 99999999887764 78888888765553
|
|
| >PLN02408 phospholipase A1 | Back alignment and domain information |
|---|
Probab=91.82 E-value=0.2 Score=48.67 Aligned_cols=36 Identities=28% Similarity=0.295 Sum_probs=26.7
Q ss_pred HHHHHHHHHHhcccCCc--eEEEEEEcccHHHHHHHHHh
Q 012188 237 EHLDMIEKSVIEPNKVK--SFHIVAHSLGCILALALAVK 273 (468)
Q Consensus 237 ~~~~di~~~l~~~l~~~--~i~lvGhS~Gg~ial~~a~~ 273 (468)
+..++| ..+++.++.+ ++++.|||+||.+|..+|..
T Consensus 183 qVl~eI-~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 183 MVREEI-ARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHH-HHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 344555 5666666543 59999999999999998865
|
|
| >PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ] | Back alignment and domain information |
|---|
Probab=91.77 E-value=1.5 Score=44.79 Aligned_cols=66 Identities=15% Similarity=0.133 Sum_probs=51.1
Q ss_pred CCcEEEEeeCCCCccChhhHHHHHHhC----CC--------CeEEEecCCCcccccc-CcHHHHHHHHHHHHhhcCCCC
Q 012188 397 KCDVNVFHGEDDELIPVECSYNVQRKI----PR--------ARVKVIEKKDHITIVV-GRQKTFARELEEIWRSSSGHE 462 (468)
Q Consensus 397 ~~PvLii~G~~D~~vp~~~~~~l~~~~----p~--------~~l~~i~~~gH~~~~~-e~p~~~~~~i~~fl~~~~~~~ 462 (468)
--.+++.||..|.++|+.....+++++ .+ .++..+||.+|+.--. ..+-.....|.+|+++...++
T Consensus 353 GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G~AP~ 431 (474)
T PF07519_consen 353 GGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENGKAPE 431 (474)
T ss_pred CCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCCCCCC
Confidence 467999999999999988877666643 21 3889999999987642 245678899999999876554
|
It also includes several bacterial homologues of unknown function. |
| >PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins | Back alignment and domain information |
|---|
Probab=91.26 E-value=0.44 Score=46.12 Aligned_cols=41 Identities=20% Similarity=0.306 Sum_probs=32.6
Q ss_pred cCCceEEEEEEcccHHHHHHHHHhCCC-----ccceEEEecCCCCC
Q 012188 250 NKVKSFHIVAHSLGCILALALAVKHPG-----SVKSLTLLAPPYYP 290 (468)
Q Consensus 250 l~~~~i~lvGhS~Gg~ial~~a~~~p~-----~v~~lVl~~p~~~~ 290 (468)
.|.+|+.|||||+|+.+...+....++ .|+.+++++.|...
T Consensus 217 ~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~ 262 (345)
T PF05277_consen 217 QGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPS 262 (345)
T ss_pred CCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCC
Confidence 477799999999999888877665443 48999999977654
|
|
| >PLN02310 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=91.10 E-value=0.44 Score=46.91 Aligned_cols=37 Identities=27% Similarity=0.360 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHhcccC----CceEEEEEEcccHHHHHHHHHh
Q 012188 236 REHLDMIEKSVIEPNK----VKSFHIVAHSLGCILALALAVK 273 (468)
Q Consensus 236 ~~~~~di~~~l~~~l~----~~~i~lvGhS~Gg~ial~~a~~ 273 (468)
++..+.+ ..+++.+. ..++.+.|||+||.+|+..|..
T Consensus 189 ~qVl~eV-~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 189 EQVMQEV-KRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHH-HHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 3445555 46665542 2379999999999999988853
|
|
| >PLN02934 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=90.94 E-value=0.3 Score=49.19 Aligned_cols=35 Identities=29% Similarity=0.431 Sum_probs=27.8
Q ss_pred HHHHHHHHHHhcccCCceEEEEEEcccHHHHHHHHH
Q 012188 237 EHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAV 272 (468)
Q Consensus 237 ~~~~di~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~ 272 (468)
+....+ ..+++.....++++.|||+||.+|..+|.
T Consensus 306 ~v~~~l-k~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKL-KSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHH-HHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 445555 56777777779999999999999998874
|
|
| >PLN02324 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=90.16 E-value=0.34 Score=47.75 Aligned_cols=35 Identities=26% Similarity=0.343 Sum_probs=25.8
Q ss_pred HHHHHHHHHhcccCC--ceEEEEEEcccHHHHHHHHHh
Q 012188 238 HLDMIEKSVIEPNKV--KSFHIVAHSLGCILALALAVK 273 (468)
Q Consensus 238 ~~~di~~~l~~~l~~--~~i~lvGhS~Gg~ial~~a~~ 273 (468)
..+.| ..+++.+.. .++.+.|||+||.+|+..|..
T Consensus 199 Vl~eV-~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 199 VQGEL-KRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHH-HHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 34445 566666653 369999999999999998853
|
|
| >PLN02802 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=89.80 E-value=0.39 Score=48.37 Aligned_cols=36 Identities=31% Similarity=0.409 Sum_probs=26.1
Q ss_pred HHHHHHHHHHhcccCC--ceEEEEEEcccHHHHHHHHHh
Q 012188 237 EHLDMIEKSVIEPNKV--KSFHIVAHSLGCILALALAVK 273 (468)
Q Consensus 237 ~~~~di~~~l~~~l~~--~~i~lvGhS~Gg~ial~~a~~ 273 (468)
+..+++ ..+++.+.. .++++.|||+||.+|...|..
T Consensus 313 qVl~eV-~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 313 SVVGEV-RRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHH-HHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 344455 466666543 379999999999999988764
|
|
| >PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids [] | Back alignment and domain information |
|---|
Probab=89.71 E-value=0.65 Score=40.72 Aligned_cols=46 Identities=9% Similarity=0.062 Sum_probs=34.9
Q ss_pred HHhcccCCceEEEEEEcccHHHHHHHHHh--C----CCccceEEEecCCCCC
Q 012188 245 SVIEPNKVKSFHIVAHSLGCILALALAVK--H----PGSVKSLTLLAPPYYP 290 (468)
Q Consensus 245 ~l~~~l~~~~i~lvGhS~Gg~ial~~a~~--~----p~~v~~lVl~~p~~~~ 290 (468)
....+-...+++|+|+|.|+.++..++.. . .++|.++++++-|...
T Consensus 73 ~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~~ 124 (179)
T PF01083_consen 73 EYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRRG 124 (179)
T ss_dssp HHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTTB
T ss_pred HHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCccc
Confidence 34444556799999999999999998877 2 3579999999866553
|
Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A .... |
| >PLN02753 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=89.45 E-value=0.42 Score=48.36 Aligned_cols=35 Identities=31% Similarity=0.386 Sum_probs=26.0
Q ss_pred HHHHHHHHHHhcccCC-----ceEEEEEEcccHHHHHHHHH
Q 012188 237 EHLDMIEKSVIEPNKV-----KSFHIVAHSLGCILALALAV 272 (468)
Q Consensus 237 ~~~~di~~~l~~~l~~-----~~i~lvGhS~Gg~ial~~a~ 272 (468)
+..+.| ..+++.++. -++.+.|||+||.+|+..|.
T Consensus 292 QVl~eV-krLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 292 QILTEV-KRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHH-HHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 344555 566665542 48999999999999999885
|
|
| >PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=88.79 E-value=0.8 Score=40.85 Aligned_cols=40 Identities=15% Similarity=0.197 Sum_probs=30.1
Q ss_pred CHHHHHHHHHHHHhcccC-CceEEEEEEcccHHHHHHHHHhC
Q 012188 234 TVREHLDMIEKSVIEPNK-VKSFHIVAHSLGCILALALAVKH 274 (468)
Q Consensus 234 t~~~~~~di~~~l~~~l~-~~~i~lvGhS~Gg~ial~~a~~~ 274 (468)
...|..+.. +..+++.+ .++|+|+|||.|+.+.+++..++
T Consensus 76 ay~DV~~AF-~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 76 AYSDVRAAF-DYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hHHHHHHHH-HHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 344555555 46666664 46999999999999999998875
|
|
| >PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase | Back alignment and domain information |
|---|
Probab=88.73 E-value=0.81 Score=40.05 Aligned_cols=61 Identities=15% Similarity=0.210 Sum_probs=46.0
Q ss_pred CCcEEEEeeCCCCccChhhHHHHHHhC---CC--CeEEEecCCCccccccC--cHHHHHHHHHHHHhh
Q 012188 397 KCDVNVFHGEDDELIPVECSYNVQRKI---PR--ARVKVIEKKDHITIVVG--RQKTFARELEEIWRS 457 (468)
Q Consensus 397 ~~PvLii~G~~D~~vp~~~~~~l~~~~---p~--~~l~~i~~~gH~~~~~e--~p~~~~~~i~~fl~~ 457 (468)
++++|-|-|+.|.+..+.+.......+ |. ...++.+|+||+..+.. -.+++.-.|.+|+.+
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 567888999999999988866665554 43 36777899999988722 246777888888864
|
This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid. |
| >PLN02719 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=88.62 E-value=0.52 Score=47.58 Aligned_cols=36 Identities=31% Similarity=0.345 Sum_probs=26.0
Q ss_pred HHHHHHHHHHhcccCC-----ceEEEEEEcccHHHHHHHHHh
Q 012188 237 EHLDMIEKSVIEPNKV-----KSFHIVAHSLGCILALALAVK 273 (468)
Q Consensus 237 ~~~~di~~~l~~~l~~-----~~i~lvGhS~Gg~ial~~a~~ 273 (468)
+..+.| ..+++.+.. .++.+.|||+||.+|...|..
T Consensus 278 QVl~eV-~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 278 QVLTEV-KRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHH-HHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 344555 466665542 379999999999999998853
|
|
| >PLN02761 lipase class 3 family protein | Back alignment and domain information |
|---|
Probab=88.14 E-value=0.55 Score=47.48 Aligned_cols=35 Identities=34% Similarity=0.383 Sum_probs=25.8
Q ss_pred HHHHHHHHHHhcccC------CceEEEEEEcccHHHHHHHHH
Q 012188 237 EHLDMIEKSVIEPNK------VKSFHIVAHSLGCILALALAV 272 (468)
Q Consensus 237 ~~~~di~~~l~~~l~------~~~i~lvGhS~Gg~ial~~a~ 272 (468)
+..+.| ..+++.++ .-++.+.|||+||.+|...|.
T Consensus 273 qVl~eV-~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 273 QVLAEV-KRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHH-HHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 445555 56666652 137999999999999998885
|
|
| >PLN03037 lipase class 3 family protein; Provisional | Back alignment and domain information |
|---|
Probab=87.99 E-value=0.56 Score=47.42 Aligned_cols=36 Identities=33% Similarity=0.380 Sum_probs=26.0
Q ss_pred HHHHHHHHHHhcccC----CceEEEEEEcccHHHHHHHHHh
Q 012188 237 EHLDMIEKSVIEPNK----VKSFHIVAHSLGCILALALAVK 273 (468)
Q Consensus 237 ~~~~di~~~l~~~l~----~~~i~lvGhS~Gg~ial~~a~~ 273 (468)
+..++| ..+++.+. ..++.+.|||+||.+|+..|..
T Consensus 299 QVl~eV-~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEV-KRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHH-HHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 445566 46665543 2379999999999999988853
|
|
| >COG4947 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=86.34 E-value=0.37 Score=40.98 Aligned_cols=49 Identities=24% Similarity=0.278 Sum_probs=39.7
Q ss_pred HHHHHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCC
Q 012188 242 IEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 242 i~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~ 290 (468)
.++.++++.=..+..+-|.||||+.|..+.-+||+.+.++|.+++.+..
T Consensus 90 yerYv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYda 138 (227)
T COG4947 90 YERYVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDA 138 (227)
T ss_pred HHHHHHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecceeeH
Confidence 3356666543356778899999999999999999999999999987754
|
|
| >KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=84.85 E-value=4.7 Score=41.23 Aligned_cols=112 Identities=14% Similarity=0.108 Sum_probs=62.2
Q ss_pred CceeEEEecCC----CCeEEEEecCCC---CccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHH
Q 012188 170 DCKFCTCWSSS----SRDTLFVKTQGP---SAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMI 242 (468)
Q Consensus 170 ~~~~~~~~~~~----~p~vl~lHG~g~---s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di 242 (468)
+.-.+..|-++ +-.|+.+||+|. ++.-.+.....++. +-+.-|+.+|+----+.+-| ..+++..=..
T Consensus 381 g~~~~~~wh~P~p~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~--aL~cPiiSVdYSLAPEaPFP----RaleEv~fAY 454 (880)
T KOG4388|consen 381 GQRSLELWHRPAPRSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQ--ALGCPIISVDYSLAPEAPFP----RALEEVFFAY 454 (880)
T ss_pred CccccccCCCCCCCCceEEEEecCCceeeeccccccHHHHHHHH--HhCCCeEEeeeccCCCCCCC----cHHHHHHHHH
Confidence 34456667433 335788999886 33233333333331 24789999998553333322 2344433333
Q ss_pred HHHHhcc---cCC--ceEEEEEEcccHHHHH----HHHHhCCCccceEEEecCCC
Q 012188 243 EKSVIEP---NKV--KSFHIVAHSLGCILAL----ALAVKHPGSVKSLTLLAPPY 288 (468)
Q Consensus 243 ~~~l~~~---l~~--~~i~lvGhS~Gg~ial----~~a~~~p~~v~~lVl~~p~~ 288 (468)
-.+++. +|. ++|+++|.|.||.+.+ .+++..=...+++++.-++.
T Consensus 455 -cW~inn~allG~TgEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~pt 508 (880)
T KOG4388|consen 455 -CWAINNCALLGSTGERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPT 508 (880)
T ss_pred -HHHhcCHHHhCcccceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecChh
Confidence 244443 443 7999999999996544 44433322346777766554
|
|
| >KOG4569 consensus Predicted lipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=84.56 E-value=1.2 Score=43.46 Aligned_cols=37 Identities=27% Similarity=0.232 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHhcccCCceEEEEEEcccHHHHHHHHHh
Q 012188 236 REHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVK 273 (468)
Q Consensus 236 ~~~~~di~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~ 273 (468)
..+.+++ +.+++.+..-++.+.|||+||.+|..+|..
T Consensus 155 ~~~~~~~-~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAEL-RRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHH-HHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 4566666 688888887799999999999999988764
|
|
| >PLN02847 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=83.96 E-value=1.4 Score=45.28 Aligned_cols=28 Identities=29% Similarity=0.227 Sum_probs=21.7
Q ss_pred HhcccCCceEEEEEEcccHHHHHHHHHh
Q 012188 246 VIEPNKVKSFHIVAHSLGCILALALAVK 273 (468)
Q Consensus 246 l~~~l~~~~i~lvGhS~Gg~ial~~a~~ 273 (468)
.++....-+++++|||+||.+|..++..
T Consensus 244 al~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 244 ALDEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHCCCCeEEEeccChHHHHHHHHHHH
Confidence 3344554589999999999999988764
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 468 | ||||
| 3afi_E | 316 | Crystal Structure Of Dbja (His-Dbja) Length = 316 | 2e-04 | ||
| 3a2l_A | 309 | Crystal Structure Of Dbja (Mutant Dbja Delta) Lengt | 2e-04 | ||
| 3a2m_A | 312 | Crystal Structure Of Dbja (Wild Type Type I) Length | 3e-04 | ||
| 2d0d_A | 282 | Crystal Structure Of A Meta-Cleavage Product Hydrol | 3e-04 | ||
| 1a8q_A | 274 | Bromoperoxidase A1 Length = 274 | 3e-04 | ||
| 2xt0_A | 297 | Dehalogenase Dppa From Plesiocystis Pacifica Sir-I | 3e-04 | ||
| 1iun_A | 282 | Meta-Cleavage Product Hydrolase From Pseudomonas Fl | 4e-04 | ||
| 1j1i_A | 296 | Crystal Structure Of A His-Tagged Serine Hydrolase | 6e-04 | ||
| 4f0j_A | 315 | Crystal Structure Of A Probable Hydrolytic Enzyme ( | 7e-04 |
| >pdb|3AFI|E Chain E, Crystal Structure Of Dbja (His-Dbja) Length = 316 | Back alignment and structure |
|
| >pdb|3A2L|A Chain A, Crystal Structure Of Dbja (Mutant Dbja Delta) Length = 309 | Back alignment and structure |
|
| >pdb|3A2M|A Chain A, Crystal Structure Of Dbja (Wild Type Type I) Length = 312 | Back alignment and structure |
|
| >pdb|2D0D|A Chain A, Crystal Structure Of A Meta-Cleavage Product Hydrolase (Cumd) A129v Mutant Length = 282 | Back alignment and structure |
|
| >pdb|1A8Q|A Chain A, Bromoperoxidase A1 Length = 274 | Back alignment and structure |
|
| >pdb|2XT0|A Chain A, Dehalogenase Dppa From Plesiocystis Pacifica Sir-I Length = 297 | Back alignment and structure |
|
| >pdb|1IUN|A Chain A, Meta-Cleavage Product Hydrolase From Pseudomonas Fluorescens Ip01 (Cumd) S103a Mutant Hexagonal Length = 282 | Back alignment and structure |
|
| >pdb|1J1I|A Chain A, Crystal Structure Of A His-Tagged Serine Hydrolase Involved In The Carbazole Degradation (Carc Enzyme) Length = 296 | Back alignment and structure |
|
| >pdb|4F0J|A Chain A, Crystal Structure Of A Probable Hydrolytic Enzyme (Pa3053) From Pseudomonas Aeruginosa Pao1 At 1.50 A Resolution Length = 315 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A Length = 282 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 2e-26
Identities = 40/222 (18%), Positives = 89/222 (40%), Gaps = 27/222 (12%)
Query: 212 YRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALA 271
YR+ A D++GFG + +P + Y+ +D I +++ +++ HIV ++ G LA+A A
Sbjct: 55 YRVIAPDMVGFGFTDRPENYNYSKDSWVDHI-IGIMDALEIEKAHIVGNAFGGGLAIATA 113
Query: 272 VKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTI 331
+++ V + L+ + + + S E++ +
Sbjct: 114 LRYSERVDRMVLMGAAGTRFD-------------VTEGLNAVWGYTPS----IENMRNLL 156
Query: 332 CLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDA 391
+ V + LA+L R + GF + + L +
Sbjct: 157 DIFAYDRSLVTDELARL----RYEASIQPGF----QESFSSMFPEPRQRWIDALASSDED 208
Query: 392 VRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEK 433
++ + + + HG +D+++P+ S + I RA++ V +
Sbjct: 209 IKT-LPNETLIIHGREDQVVPLSSSLRLGELIDRAQLHVFGR 249
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} Length = 289 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 2e-25
Identities = 33/250 (13%), Positives = 78/250 (31%), Gaps = 31/250 (12%)
Query: 191 GPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPN 250
GP A N ++ YR+ +D G+G+S +S + +++ V++
Sbjct: 46 GPGATGWANFSRNIDPLVEAGYRVILLDCPGWGKSDSVVNSGSRSDLNARILKS-VVDQL 104
Query: 251 KVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRV 310
+ H++ +S+G ++A +K P V L L+ + ++++
Sbjct: 105 DIAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYR 164
Query: 311 WP----LIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHT 366
P L ++ + L +++R ++
Sbjct: 165 QPTIENLKLMMDIFVFDTSDLTDAL---------FEARLNNMLSRRDHLENFVKSLEA-- 213
Query: 367 HNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRA 426
N L +K + G +D +P++ + I +
Sbjct: 214 -NPKQFPD----------FGPRLAE----IKAQTLIVWGRNDRFVPMDAGLRLLSGIAGS 258
Query: 427 RVKVIEKKDH 436
+ + H
Sbjct: 259 ELHIFRDCGH 268
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A Length = 286 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 3e-24
Identities = 42/249 (16%), Positives = 83/249 (33%), Gaps = 35/249 (14%)
Query: 191 GPSA----FWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSV 246
GP A + + P + YR+ D GF +S + ++ +
Sbjct: 43 GPGAGGWSNYYRNVGPFVDA----GYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKG-L 97
Query: 247 IEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVA 306
++ + H+V +++G AL A+++P + L L+ P A M
Sbjct: 98 MDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAP-----MPMEG 152
Query: 307 PRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHT 366
+ ++ L A YE + + + +V+ + L+T ++
Sbjct: 153 IKLLFKLYA-----EPSYETLKQML--------QVFLYDQSLITEELLQGRW------EA 193
Query: 367 HNAAWHTLHNIICGTANKLDGYLDAVR--NHVKCDVNVFHGEDDELIPVECSYNVQRKIP 424
L N + D +K + G DD +P++ + I
Sbjct: 194 IQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNID 253
Query: 425 RARVKVIEK 433
AR+ V K
Sbjct: 254 DARLHVFSK 262
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} Length = 278 | Back alignment and structure |
|---|
Score = 99.7 bits (249), Expect = 8e-24
Identities = 38/244 (15%), Positives = 79/244 (32%), Gaps = 21/244 (8%)
Query: 191 GPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD-SLYTVREHLDMIEKSVIEP 249
+ T F+ Y ++ ++L G G S + S Y++ E + +E + E
Sbjct: 34 EYNDNG-NTFANPFTD----HYSVYLVNLKGCGNSDSAKNDSEYSMTETIKDLEA-IREA 87
Query: 250 NKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRR 309
+ + HS G +LAL A + S+ + + + S Y + V R
Sbjct: 88 LYINKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNR 147
Query: 310 VWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNA 369
+ ++ A + + + + + F ++ ++ + N
Sbjct: 148 IVSIMN-----ALNDDSTVQEERKALSREWALMSFYSEEKLEEALKLPNSGKTVGNRLNY 202
Query: 370 AWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVK 429
D + VK ++ G+ D P S + IP A +
Sbjct: 203 FRQ---------VEYKDYDVRQKLKFVKIPSFIYCGKHDVQCPYIFSCEIANLIPNATLT 253
Query: 430 VIEK 433
E+
Sbjct: 254 KFEE 257
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} Length = 272 | Back alignment and structure |
|---|
Score = 98.6 bits (246), Expect = 2e-23
Identities = 28/243 (11%), Positives = 62/243 (25%), Gaps = 29/243 (11%)
Query: 191 GPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPN 250
T F S+ + Y+ +DL G G S + +IE + E
Sbjct: 31 SLDKQSTCLFFEPLSNVGQ--YQRIYLDLPGMGNSDPI-SPSTSDNVLETLIEA-IEEII 86
Query: 251 KVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRV 310
+ F + HS G LA A+A + L P ++ + +
Sbjct: 87 GARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPV--ITADHSKRLTGKHINILEEDI 144
Query: 311 WPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAA 370
P+ + + + ++ G
Sbjct: 145 NPVENKEYFADFLS-----------------MNVIINNQAWHDYQNLIIPGLQKEDK-TF 186
Query: 371 WHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKV 430
L N + + + G +D+++ + + + +
Sbjct: 187 IDQLQNNY-----SFTFEEKLKNINYQFPFKIMVGRNDQVVGYQEQLKLINHNENGEIVL 241
Query: 431 IEK 433
+ +
Sbjct: 242 LNR 244
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A Length = 291 | Back alignment and structure |
|---|
Score = 98.2 bits (245), Expect = 4e-23
Identities = 39/246 (15%), Positives = 82/246 (33%), Gaps = 28/246 (11%)
Query: 191 GPSAF-WT--ETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVI 247
GP A WT + + + A+D G+G S K + R ++ +
Sbjct: 46 GPGAASWTNFSRNIAVLAR----HFHVLAVDQPGYGHSDKRAEHGQFNRYAAMALKG-LF 100
Query: 248 EPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAP 307
+ + +V ++LG A+ A+ +P L L+ P + +
Sbjct: 101 DQLGLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSIN--------LFAPDPT 152
Query: 308 RRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTH 367
V L F + E++ + +++ + + L R
Sbjct: 153 EGVKRLSKFSVAPT--RENLEAFLRVMVYDKNLITPELVDQ----RFALASTPESL---- 202
Query: 368 NAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRAR 427
A + G + V ++ V + G +D + P++ + + IPRA+
Sbjct: 203 -TATRAMGKSFAGADFEAGMMWREVYR-LRQPVLLIWGREDRVNPLDGALVALKTIPRAQ 260
Query: 428 VKVIEK 433
+ V +
Sbjct: 261 LHVFGQ 266
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 Length = 285 | Back alignment and structure |
|---|
Score = 97.8 bits (244), Expect = 5e-23
Identities = 37/226 (16%), Positives = 78/226 (34%), Gaps = 29/226 (12%)
Query: 212 YRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSV---IEPNKVKSFHIVAHSLGCILAL 268
+ + A DL+GFG+S P + + M + + + ++ HIV +S+G + L
Sbjct: 59 FFVVAPDLIGFGQSEYPETYPGHIMSWVGMRVEQILGLMNHFGIEKSHIVGNSMGGAVTL 118
Query: 269 ALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHIS 328
L V+ P + L+ P+ ++ A R+ P S
Sbjct: 119 QLVVEAPERFDKVALMGSVGAPMNARPPELARLLAFYADPRLTPYRELIHSFVY------ 172
Query: 329 RTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGY 388
+ + + ++V R + ++
Sbjct: 173 ---------DPENFPGMEEIVKS-RFEVANDPE--------VRRIQEVMFESMKAGMESL 214
Query: 389 LDAVR--NHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIE 432
+ + DV VFHG D ++P++ S + + + A + V++
Sbjct: 215 VIPPATLGRLPHDVLVFHGRQDRIVPLDTSLYLTKHLKHAELVVLD 260
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} Length = 245 | Back alignment and structure |
|---|
Score = 90.4 bits (225), Expect = 7e-21
Identities = 33/237 (13%), Positives = 69/237 (29%), Gaps = 63/237 (26%)
Query: 212 YRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEK---SVIEPNKVKSFHIVAHSLGCILAL 268
Y +DL G G S TV ++D + + K+ ++ +S+G + L
Sbjct: 42 YNCILLDLKGHGESKGQ--CPSTVYGYIDNVANFITNSEVTKHQKNITLIGYSMGGAIVL 99
Query: 269 ALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGAS---MACWYE 325
+A+K +V+ + L+ + + + L G ++ Y
Sbjct: 100 GVALKKLPNVRKVVSLSGGARFDKLDKDFMEKIYHN-QLDNNYLLECIGGIDNPLSEKYF 158
Query: 326 HISRTI------CLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIIC 379
L+ CK + + L
Sbjct: 159 ETLEKDPDIMINDLIACKLIDLVDNLKN-------------------------------- 186
Query: 380 GTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDH 436
+ V +D+ L VE S +++++ + +K+ E H
Sbjct: 187 ----------------IDIPVKAIVAKDELLTLVEYSEIIKKEVENSELKIFETGKH 227
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} Length = 306 | Back alignment and structure |
|---|
Score = 91.6 bits (228), Expect = 9e-21
Identities = 35/229 (15%), Positives = 79/229 (34%), Gaps = 36/229 (15%)
Query: 212 YRLFAIDLLGFGRSPKPTDSLYTVREH-LDMIEKSVIEPNKVKSFHIVAHSLGCILALAL 270
YR +A+D++G P + T ++ +++ V + ++ H++ SLG + +
Sbjct: 94 YRTYAVDIIGDKNKSIPENVSGTRTDYANWLLD--VFDNLGIEKSHMIGLSLGGLHTMNF 151
Query: 271 AVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRT 330
++ P VKS +L+P +P +Y + A V + + M +
Sbjct: 152 LLRMPERVKSAAILSPAETFLPFHHDFYKYALGLTASNGVETFLNW---MMNDQNVLHPI 208
Query: 331 ICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLD 390
V +F A ++ ++ R +
Sbjct: 209 F---------VKQFKAGVMWQDGSRNPNP-------------------NADGFPYVFTDE 240
Query: 391 AVRNHVKCDVNVFHGEDDELI-PVECSYNVQRKIPRARVKVIEKKDHIT 438
+R + + + GE + + P + +P +VI+ H+
Sbjct: 241 ELR-SARVPILLLLGEHEVIYDPHSALHRASSFVPDIEAEVIKNAGHVL 288
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 Length = 296 | Back alignment and structure |
|---|
Score = 90.1 bits (224), Expect = 2e-20
Identities = 46/223 (20%), Positives = 80/223 (35%), Gaps = 31/223 (13%)
Query: 212 YRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVK-SFHIVAHSLGCILALAL 270
YR+ A+D+LGFG++ KP D YT + + I+ IV +S+G L +
Sbjct: 66 YRVIAMDMLGFGKTAKP-DIEYTQDRRIRHL-HDFIKAMNFDGKVSIVGNSMGGATGLGV 123
Query: 271 AVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRT 330
+V H V +L L+ V + P+I + + E +
Sbjct: 124 SVLHSELVNALVLMGSAGLVVE-------------IHEDLRPIINYDFT----REGMVHL 166
Query: 331 ICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLD 390
+ L ++ + + +R E A T+ I D
Sbjct: 167 VKALTNDGFKIDDAMI----NSRYTYATDEAT----RKAYVATMQWIREQGGLFYD---P 215
Query: 391 AVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEK 433
V+ V G+DD+++PVE +Y I + +I
Sbjct: 216 EFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLIDDSWGYIIPH 258
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} Length = 330 | Back alignment and structure |
|---|
Score = 89.4 bits (222), Expect = 8e-20
Identities = 41/265 (15%), Positives = 78/265 (29%), Gaps = 55/265 (20%)
Query: 191 GPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD---SLYT----------VRE 237
G + + + + D +G G S D +T V
Sbjct: 65 GMAHNYVANIAALADETG---RTVIHYDQVGCGNSTHLPDAPADFWTPQLFVDEFHAVCT 121
Query: 238 HLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYP------- 290
L IE+ +H++ S G +L +AV+ P + SL + P
Sbjct: 122 ALG-IER----------YHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRLWSEAA 170
Query: 291 ---VPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAK 347
+ ++ + + + + A +Y R +C ++ + +A+
Sbjct: 171 GDLRAQLPAETRAALDRHEAAGTITHPDYLQAAAEFYR---RHVCRVVPTPQDFADSVAQ 227
Query: 348 LVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGED 407
+ + ++ + GT +D + V V V GE
Sbjct: 228 MEAEPTV------------YHTMNGPNEFHVVGTLGDWS-VIDRLP-DVTAPVLVIAGEH 273
Query: 408 DELIPVECSYNVQRKIPRARVKVIE 432
DE P + IP R V
Sbjct: 274 DEATP-KTWQPFVDHIPDVRSHVFP 297
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A Length = 254 | Back alignment and structure |
|---|
Score = 87.3 bits (217), Expect = 9e-20
Identities = 37/255 (14%), Positives = 77/255 (30%), Gaps = 48/255 (18%)
Query: 202 PNFSSASKSTYRLFAIDLLGFGRSPKPTD--SLYTVREHLDMIEKSVIEPNKVKSFHIVA 259
P + +K + + A D G+G S P +++ K K ++
Sbjct: 42 PQLKNLNKKLFTVVAWDPRGYGHSRPPDRDFPADFFERDAKDA-VDLMKALKFKKVSLLG 100
Query: 260 HSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGAS 319
S G I AL A K+P + + + + + W
Sbjct: 101 WSDGGITALIAAAKYPSYIHKMVIWG----ANAYVTDEDSMIYEGIRDVSKWSERTRKPL 156
Query: 320 MACW-YEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNII 378
A + Y++ +RT + + + + N H L +
Sbjct: 157 EALYGYDYFART-------CEKWVDGIRQFKHLPD-------------GNICRHLLPRV- 195
Query: 379 CGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHIT 438
+C + HGE D L+P + + + + +R+ ++ + H
Sbjct: 196 ------------------QCPALIVHGEKDPLVPRFHADFIHKHVKGSRLHLMPEGKHNL 237
Query: 439 IVVGRQKTFARELEE 453
+ F + E+
Sbjct: 238 HLR-FADEFNKLAED 251
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} Length = 269 | Back alignment and structure |
|---|
Score = 86.2 bits (214), Expect = 3e-19
Identities = 36/226 (15%), Positives = 67/226 (29%), Gaps = 30/226 (13%)
Query: 212 YRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALA 271
Y + IDL G G D + ++++ +++ K KS + +S+G +AL A
Sbjct: 43 YHVITIDLPGHGEDQSSMDETWNFDYITTLLDR-ILDKYKDKSITLFGYSMGGRVALYYA 101
Query: 272 VKHPGSVKSLTLL-APPYYPVPKGAQASQYVMRKVAPR-RVWPLIAFGASMACWYEHISR 329
+ + +L L P + V A + + F S+
Sbjct: 102 INGHIPISNLILESTSPGIKEEANQLERRLVDDARAKVLDIAGIELFVNDWEKLPLFQSQ 161
Query: 330 TICLLICKNHRVWEFLAKLVTRNRIRTFL--LEGFFCHTHNAAWHTLHNIICGTANKLDG 387
+ + + L + W L I
Sbjct: 162 LE-----LPVEIQHQIRQQRLSQSPHKMAKALRDYGTGQMPNLWPRLKEI---------- 206
Query: 388 YLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEK 433
K + GE DE V+ + + IP ++ K+I
Sbjct: 207 ---------KVPTLILAGEYDE-KFVQIAKKMANLIPNSKCKLISA 242
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} Length = 292 | Back alignment and structure |
|---|
Score = 86.6 bits (214), Expect = 4e-19
Identities = 17/102 (16%), Positives = 36/102 (35%), Gaps = 6/102 (5%)
Query: 191 GPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPN 250
+ + + + + ID G SP + +R+ ++ I + E
Sbjct: 54 STADNF-ANIIDKLPD----SIGILTIDAPNSGYSPVSNQANVGLRDWVNAILM-IFEHF 107
Query: 251 KVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVP 292
K +S+ + HS+G AL + + + L P +
Sbjct: 108 KFQSYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPTTVMIY 149
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A Length = 293 | Back alignment and structure |
|---|
Score = 83.4 bits (207), Expect = 5e-18
Identities = 45/255 (17%), Positives = 75/255 (29%), Gaps = 53/255 (20%)
Query: 201 FPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYT----------VREHLDMIEKSVIEPN 250
+ +K + D G GRS +P S +T +R L EK
Sbjct: 45 LLSLRDMTKEGITVLFYDQFGCGRSEEPDQSKFTIDYGVEEAEALRSKLFGNEK------ 98
Query: 251 KVKSFHIVAHSLGCILALALAVKHPGSVKSLTL----LAPPYYPVPKGAQASQYVMRKVA 306
++ S G LALA AVK+ +K L + + P +
Sbjct: 99 ----VFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTV------KEMNRLIDEL 148
Query: 307 PRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRT-FLLEGFFCH 365
P + I N E + ++ +R+
Sbjct: 149 PAKYRDAIK-----KYGSSGSYE--------NPEYQEAVNYFYHQHLLRSEDWPPEVLKS 195
Query: 366 THNAAWHTLHNIICG------TANKLDG-YLDAVRNHVKCDVNVFHGEDDELIPVECSYN 418
A ++ I+ G T D D + +K + GE DE+ P +
Sbjct: 196 LEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISA-IKIPTLITVGEYDEVTP-NVARV 253
Query: 419 VQRKIPRARVKVIEK 433
+ KI + + V
Sbjct: 254 IHEKIAGSELHVFRD 268
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* Length = 271 | Back alignment and structure |
|---|
Score = 82.7 bits (205), Expect = 6e-18
Identities = 33/245 (13%), Positives = 71/245 (28%), Gaps = 58/245 (23%)
Query: 212 YRLFAIDLLGFGRSPKP---TDSLYTVREH-LDMIEKSVIEPNKVKSFHIVAHSLGCILA 267
+R+ D +G G S + T+ + D+++ V E +K V HS+G ++
Sbjct: 47 HRVILFDYVGSGHSDLRAYDLNRYQTLDGYAQDVLD--VCEALDLKETVFVGHSVGALIG 104
Query: 268 LALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHI 327
+ +++ P L ++ P +P + +Y
Sbjct: 105 MLASIRRPELFSHLVMVGP-------------------SPC-------YLNDPPEYYGGF 138
Query: 328 SRTICLLICKNHRVWEFLAKLVTRNRIRTF--LLEGFFCHTHNAAW-HTLHNIICGTANK 384
L +++ +N I L + C T
Sbjct: 139 EE----------EQLLGLLEMMEKNYIGWATVFAATVLNQPDRPEIKEELESRFCSTD-- 186
Query: 385 LDGYLDAVR-----------NHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEK 433
+ + V + DD + P + + +P + +K +E
Sbjct: 187 PVIARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAPATVGKYMHQHLPYSSLKQMEA 246
Query: 434 KDHIT 438
+ H
Sbjct: 247 RGHCP 251
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 Length = 258 | Back alignment and structure |
|---|
Score = 82.3 bits (204), Expect = 7e-18
Identities = 37/234 (15%), Positives = 73/234 (31%), Gaps = 53/234 (22%)
Query: 212 YRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALA 271
+ L +DL GFGRS ++ + + + + + + SLG ++A +A
Sbjct: 40 FTLHLVDLPGFGRSRGFGA--LSLADMAEAVLQQAPDK-----AIWLGWSLGGLVASQIA 92
Query: 272 VKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTI 331
+ HP V++L +A P + ++ K F ++ +
Sbjct: 93 LTHPERVRALVTVA----SSPCFSARDEWPGIKPDVLA-----GFQQQLSDDQQ------ 137
Query: 332 CLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANK----LDG 387
R E R L+ T L + L+G
Sbjct: 138 --------RTVE-----------RFLALQTMGTETARQDARALKKTVLALPMPEVDVLNG 178
Query: 388 YLDAVRNH--------VKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEK 433
L+ ++ V +G D L+P + + + P + + K
Sbjct: 179 GLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAK 232
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} Length = 315 | Back alignment and structure |
|---|
Score = 81.8 bits (202), Expect = 2e-17
Identities = 42/243 (17%), Positives = 81/243 (33%), Gaps = 41/243 (16%)
Query: 208 SKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILA 267
+ + YR+ A+D +GF +S KP Y+ ++ +++E V ++ HS+G +LA
Sbjct: 70 ADAGYRVIAVDQVGFCKSSKPAHYQYSFQQLAANT-HALLERLGVARASVIGHSMGGMLA 128
Query: 268 LALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAF--GASMACWYE 325
A+ +P V+ L L+ P K + R + A +Y
Sbjct: 129 TRYALLYPRQVERLVLVNPIGLEDWKALGVPWRSVDDWYRRDLQTSAEGIRQYQQATYYA 188
Query: 326 HISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKL 385
R EF + + + +G + AW++ +
Sbjct: 189 GEWRP------------EFDR--WVQMQAGMYRGKGR----ESVAWNSALTYDMIFTQPV 230
Query: 386 DGYLDAVRNHVKCDVNVFHGEDDELIPV----------------ECSYNVQRKIPRARVK 429
LD ++ + GE D + + R+IP+A +
Sbjct: 231 VYELDRLQ----MPTLLLIGEKDNTAIGKDAAPAELKARLGNYAQLGKDAARRIPQATLV 286
Query: 430 VIE 432
Sbjct: 287 EFP 289
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} Length = 314 | Back alignment and structure |
|---|
Score = 81.7 bits (202), Expect = 3e-17
Identities = 41/222 (18%), Positives = 68/222 (30%), Gaps = 27/222 (12%)
Query: 212 YRLFAIDLLGFGRSPKPTDSLYTVREH-LDMIEKSVIEPNKVKSFHIVAHSLGCILALAL 270
+ A+D G G S KP Y ++ D+ +I +V HSLG ++
Sbjct: 95 FTTIAVDQRGHGLSDKPETG-YEANDYADDIAG--LIRTLARGHAILVGHSLGARNSVTA 151
Query: 271 AVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRT 330
A K+P V+S+ + Y + A + + + + A A +A Y +I
Sbjct: 152 AAKYPDLVRSVVAIDFTPYIETEALDALEARVNA-GSQLFEDIKAVEAYLAGRYPNIPA- 209
Query: 331 ICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLD 390
A+ + + TA L L
Sbjct: 210 ---------DAIRIRAESGYQPVDGGL------------RPLASSAAMAQTARGLRSDLV 248
Query: 391 AVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIE 432
V V + GE +L+ R P V V+
Sbjct: 249 PAYRDVTKPVLIVRGESSKLVSAAALAKTSRLRPDLPVVVVP 290
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* Length = 298 | Back alignment and structure |
|---|
Score = 80.3 bits (198), Expect = 6e-17
Identities = 39/280 (13%), Positives = 72/280 (25%), Gaps = 26/280 (9%)
Query: 191 GPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPK--PTDSLYTVREH-LDMIEKSVI 247
+ W + + + D GRS Y E D + V+
Sbjct: 34 LSALGWPDEFARRLADGG---LHVIRYDHRDTGRSTTRDFAAHPYGFGELAADAVA--VL 88
Query: 248 EPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLA--------PPYYPVPKGAQASQ 299
+ V H+V S+G + +A+ H + SLT+L + +
Sbjct: 89 DGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTL 148
Query: 300 YVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLL 359
+ + L +++ + R+ +
Sbjct: 149 DGLPGPQQPFLDALALMNQPAEGRAAEVAKRV-----SKWRILSGTGVPFDDAEYARWEE 203
Query: 360 EGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNV 419
A H +R V V E D + P ++
Sbjct: 204 RAIDHAGGVLAEPYAH---YSLTLPPPSRAAELRE-VTVPTLVIQAEHDPIAPAPHGKHL 259
Query: 420 QRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSSS 459
IP AR+ I H + A + RS++
Sbjct: 260 AGLIPTARLAEIPGMGHA-LPSSVHGPLAEVILAHTRSAA 298
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} Length = 268 | Back alignment and structure |
|---|
Score = 79.6 bits (197), Expect = 7e-17
Identities = 36/254 (14%), Positives = 79/254 (31%), Gaps = 56/254 (22%)
Query: 191 GPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREH-LDMIEKSVIEP 249
G ++W L Y++ D G G +P Y++ + ++ + +
Sbjct: 26 GSGSYWLPQL-AVLEQ----EYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQ--ALVA 78
Query: 250 NKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRR 309
++ + +V H+LG ++ + LA+ +P SV L + + Q +R+
Sbjct: 79 AGIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQ--VRERLLYS 136
Query: 310 VWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNA 369
A Y +++A
Sbjct: 137 GGAQAWVEAQPLFLYPA----------------DWMAA-----------------RAPRL 163
Query: 370 AWHTLHNIICGTANKLDGY---LDAVRNH--------VKCDVNVFHGEDDELIPVECSYN 418
+ + L+A++ ++C V + DD L+P CS
Sbjct: 164 EAEDALALAHFQG--KNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSE 221
Query: 419 VQRKIPRARVKVIE 432
+ +P ++ V+
Sbjct: 222 LHAALPDSQKMVMP 235
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* Length = 276 | Back alignment and structure |
|---|
Score = 79.4 bits (196), Expect = 9e-17
Identities = 28/225 (12%), Positives = 65/225 (28%), Gaps = 33/225 (14%)
Query: 211 TYRLFAIDLLGFGRSPKPTDSLYTVREHL-DMIEKSVIEPNKVKSFHIVAHSLGCILALA 269
+R+ + G G SP + +E + D +E +++ V++F V+HS G + +
Sbjct: 53 DFRVIVPNWRGHGLSPSEVPD-FGYQEQVKDALE--ILDQLGVETFLPVSHSHGGWVLVE 109
Query: 270 LAVKH-PGSVKSLTLL-APPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHI 327
L + P ++ + P P A++ + + W W +
Sbjct: 110 LLEQAGPERAPRGIIMDWLMWAPKPDFAKS----LTLLKDPERWRE-GTHGLFDVWLDGH 164
Query: 328 SRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDG 387
RV L + + + G + ++
Sbjct: 165 DE---------KRVRHHLLEEMADYGYDCWGRSGRVIEDAYGRNGSPMQMMANLTKTR-- 213
Query: 388 YLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIE 432
+R + E + + + + P +
Sbjct: 214 ---PIR--------HIFSQPTEPEYEKINSDFAEQHPWFSYAKLG 247
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} Length = 282 | Back alignment and structure |
|---|
Score = 78.5 bits (194), Expect = 2e-16
Identities = 37/265 (13%), Positives = 75/265 (28%), Gaps = 69/265 (26%)
Query: 193 SAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKP---TDSLYTVREHL--DMIEKSVI 247
W + P + + D +G G+S T ++ E D+ E ++
Sbjct: 41 QNMW-RFMLPELEK----QFTVIVFDYVGSGQSDLESFSTKRYSSL-EGYAKDVEE--IL 92
Query: 248 EPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLA--PPYYPVPKGAQASQYVMRKV 305
+ + I+ HS+ I+A + + +T++ P + P
Sbjct: 93 VALDLVNVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPD----------- 141
Query: 306 APRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIR--TFLLEGFF 363
+ R E L L+ +N I +L
Sbjct: 142 -----------------YVGGFER----------DDLEELINLMDKNYIGWANYLAPLVM 174
Query: 364 CHTHN-AAWHTLHNIICGTANKLDGYLDAVR-----------NHVKCDVNVFHGEDDELI 411
+H+ L C T + + +F D L
Sbjct: 175 GASHSSELIGELSGSFCTTDP--IVAKTFAKATFFSDYRSLLEDISTPALIFQSAKDSLA 232
Query: 412 PVECSYNVQRKIPRARVKVIEKKDH 436
E + IP +++++I+ + H
Sbjct: 233 SPEVGQYMAENIPNSQLELIQAEGH 257
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} Length = 330 | Back alignment and structure |
|---|
Score = 77.1 bits (190), Expect = 9e-16
Identities = 40/239 (16%), Positives = 73/239 (30%), Gaps = 30/239 (12%)
Query: 203 NFSSASKS-TYRLFAIDLLGFGRSPKPTDSLYTVREHL-DMIEKSVIEPNKVKSFHIVAH 260
+ + A+DL G G S D Y+ + + + V+ + +V
Sbjct: 96 TWDTVIVGLGEPALAVDLPGHGHSAWREDGNYSPQLNSETLAP--VLRELAPGAEFVVGM 153
Query: 261 SLGCILALALAVKHPGSVKSLTLL--APPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGA 318
SLG + A+ LA P V L L+ P + A+ + VA
Sbjct: 154 SLGGLTAIRLAAMAPDLVGELVLVDVTPSAL--QRHAELTAEQRGTVALMHGEREFPSFQ 211
Query: 319 SMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNII 378
+M + A +R + N W ++ I
Sbjct: 212 AML------------------DLTIAAAPHRDVKSLRRGVFHNSR-RLDNGNWVWRYDAI 252
Query: 379 CGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRAR-VKVIEKKDH 436
+ G D V + + + G + + + + R+ R V ++EK H
Sbjct: 253 RTFGD-FAGLWDDVD-ALSAPITLVRGGSSGFVTDQDTAELHRRATHFRGVHIVEKSGH 309
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} Length = 281 | Back alignment and structure |
|---|
Score = 76.3 bits (188), Expect = 1e-15
Identities = 42/258 (16%), Positives = 75/258 (29%), Gaps = 50/258 (19%)
Query: 193 SAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKV 252
W E P A YR+ D GFG+S +P + Y + ++E ++
Sbjct: 40 GRSW-EYQVPALVEAG---YRVITYDRRGFGKSSQPWEG-YEYDTFTSDLH-QLLEQLEL 93
Query: 253 KSFHIVAHSLGC-ILALALAVKHPGSVKSLTLL-APPYYPVPKGAQASQYVMRKVAPRRV 310
++ +V S+G +A ++ ++ + A P Y +
Sbjct: 94 QNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGALDDATIETFK 153
Query: 311 WPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAA 370
+I + EF + E F + +
Sbjct: 154 SGVINDRLAFL--------------------DEFTKGFFAAGDRTDLVSESFRLYNWDI- 192
Query: 371 WHTLHNIICGTANKLDGYLDAVRNHVKCDVN-----------VFHGEDDELIPVECS-YN 418
G LD + K D + HG+ D +P E S
Sbjct: 193 ---------AAGASPKGTLDCITAFSKTDFRKDLEKFNIPTLIIHGDSDATVPFEYSGKL 243
Query: 419 VQRKIPRARVKVIEKKDH 436
IP ++V +I+ H
Sbjct: 244 THEAIPNSKVALIKGGPH 261
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A Length = 255 | Back alignment and structure |
|---|
Score = 75.1 bits (185), Expect = 2e-15
Identities = 37/241 (15%), Positives = 74/241 (30%), Gaps = 44/241 (18%)
Query: 203 NFSSASK---STYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIE--KSVIEPNKVKSFHI 257
N ++ + + + +D+ G SP+ Y M + ++ ++
Sbjct: 31 NLGVLARDLVNDHNIIQVDVRNHGLSPREPVMNYP-----AMAQDLVDTLDALQIDKATF 85
Query: 258 VAHSLGCILALALAVKHPGSVKSLTLL--APPYYPVPKGAQASQYVMRKVAPRRVWPLIA 315
+ HS+G +AL P + L + AP Y V + + + V+
Sbjct: 86 IGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAA-INAVSESDAQTRQQ 144
Query: 316 FGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLH 375
A M +H+ V +FL K R + W
Sbjct: 145 AAAIMR---QHL---------NEEGVIQFLLKSFVDGEWRFNV---------PVLWDQYP 183
Query: 376 NIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKD 435
+I+ K+ + G + + + ++ + P+AR VI
Sbjct: 184 HIV--GWEKIPAW--------DHPALFIPGGNSPYVSEQYRDDLLAQFPQARAHVIAGAG 233
Query: 436 H 436
H
Sbjct: 234 H 234
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 Length = 274 | Back alignment and structure |
|---|
Score = 75.5 bits (186), Expect = 2e-15
Identities = 55/278 (19%), Positives = 92/278 (33%), Gaps = 52/278 (18%)
Query: 191 GPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPN 250
W + A YR A D G G S D Y D + ++
Sbjct: 30 LNGDAW-QDQLKAVVDA---GYRGIAHDRRGHGHSTPVWDG-YDFDTFADDLN-DLLTDL 83
Query: 251 KVKSFHIVAHSLGC-ILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRR 309
++ +VAHS+G LA + G ++S LL+ +P S V
Sbjct: 84 DLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLS----AIPPVMIKSDKNPDGVPDEV 139
Query: 310 VWPLI-AFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHN 368
L + +++ + + NR + +G +
Sbjct: 140 FDALKNGVLTERSQFWK-----------------DTAEGFFSANRPGNKVTQGN----KD 178
Query: 369 AAWHTLHNIICGTANKLDGYLDAVRNHVKCDVN-----------VFHGEDDELIPVECS- 416
A W+ A ++G + V D V HG+DD+++P++ +
Sbjct: 179 AFWYM------AMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDATG 232
Query: 417 YNVQRKIPRARVKVIEKKDHITIVVGRQK-TFARELEE 453
+ IP A +KV E H +V K F R+L E
Sbjct: 233 RKSAQIIPNAELKVYEGSSHGIAMVPGDKEKFNRDLLE 270
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A Length = 293 | Back alignment and structure |
|---|
Score = 75.5 bits (186), Expect = 2e-15
Identities = 49/278 (17%), Positives = 76/278 (27%), Gaps = 60/278 (21%)
Query: 191 GPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREH-LDMIEKSVIEP 249
G W P F +A YR D G G + +T + D +IE
Sbjct: 54 GAGRTWHPHQVPAFLAAG---YRCITFDNRGIGATENAEG--FTTQTMVADTAA--LIET 106
Query: 250 NKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRR 309
+ +V S+G +A L V P V S L+A + +A Q+ + A
Sbjct: 107 LDIAPARVVGVSMGAFIAQELMVVAPELVSSAVLMA----TRGRLDRARQFFNKAEA--- 159
Query: 310 VWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGF---FCHT 366
+++ +L R LLE F +
Sbjct: 160 ------------------------------ELYDSGVQLPPTYDARARLLENFSRKTLND 189
Query: 367 HNAAWHTLHNIICGTANKLDGY---LDAVRNH--------VKCDVNVFHGEDDELIPVEC 415
A + G LD + V V DD + P
Sbjct: 190 DVAVGDWIAMFSMWPIKSTPGLRCQLDCAPQTNRLPAYRNIAAPVLVIGFADDVVTPPYL 249
Query: 416 SYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEE 453
V +P R I H+ R + + +
Sbjct: 250 GREVADALPNGRYLQIPDAGHLGFFE-RPEAVNTAMLK 286
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} Length = 286 | Back alignment and structure |
|---|
Score = 75.1 bits (185), Expect = 2e-15
Identities = 42/224 (18%), Positives = 74/224 (33%), Gaps = 14/224 (6%)
Query: 212 YRLFAIDLLGFGRSPKPTD-SLYTVREHL-DMIEKSVIEPNKVKSFHIVAHSLGCILALA 269
YR+ A DL G GRS + Y+ L + VI+ + +V HS+G +LA A
Sbjct: 54 YRVVAPDLFGHGRSSHLEMVTSYSSLTFLAQIDR--VIQELPDQPLLLVGHSMGAMLATA 111
Query: 270 LAVKHPGSVKSLTLL-APPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHIS 328
+A P +K L L+ P K A + + P +A +
Sbjct: 112 IASVRPKKIKELILVELPLPAEESKKESAVNQLTTCLDYLSSTPQHPIFPDVATAASRLR 171
Query: 329 RTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGY 388
+ I EF L R G + Y
Sbjct: 172 QAI------PSLSEEFSYILAQRITQPN--QGGVRWSWDAIIRTRSILGLNNLPGGRSQY 223
Query: 389 LDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIE 432
L+ ++ ++ + +G+ +L E + + +A+ +
Sbjct: 224 LEMLK-SIQVPTTLVYGDSSKLNRPEDLQQQKMTMTQAKRVFLS 266
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* Length = 279 | Back alignment and structure |
|---|
Score = 74.8 bits (184), Expect = 3e-15
Identities = 45/248 (18%), Positives = 76/248 (30%), Gaps = 32/248 (12%)
Query: 191 GPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPN 250
W E + YR+ D GFG S K Y + +V+E
Sbjct: 34 LDGHSW-ERQTRELLAQG---YRVITYDRRGFGGSSKVNTG-YDYDTFAADLH-TVLETL 87
Query: 251 KVKSFHIVAHSLGC-ILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRR 309
++ +V S+G LA +A V L LA P Q + P+
Sbjct: 88 DLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLAS---LEPFLVQRDDN--PEGVPQE 142
Query: 310 VWPLI--AFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTH 367
V+ I A W+ + + + E L ++ +
Sbjct: 143 VFDGIEAAAKGDRFAWFTDFYKNF-------YNLDENLGSRISEQAVTGSWNVAIGSAPV 195
Query: 368 NAAWHTLHNIICGTANKLD--GYLDAVRNHVKCDVNVFHGEDDELIPVECS-YNVQRKIP 424
A A D ++AVR + HG D ++P++ + + +P
Sbjct: 196 AAY-------AVVPAWIEDFRSDVEAVR-AAGKPTLILHGTKDNILPIDATARRFHQAVP 247
Query: 425 RARVKVIE 432
A +E
Sbjct: 248 EADYVEVE 255
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} Length = 285 | Back alignment and structure |
|---|
Score = 75.1 bits (185), Expect = 3e-15
Identities = 31/225 (13%), Positives = 68/225 (30%), Gaps = 23/225 (10%)
Query: 212 YRLFAIDLLGFGRSPKPTD-SLYTVREHL-DMIEKSVIEPNKVKSFHIVAHSLGCILALA 269
+R+ ++ G G S D Y ++L D+ ++ ++ F + SLG +L +
Sbjct: 56 WRVLCPEMRGRGDSDYAKDPMTYQPMQYLQDLEA--LLAQEGIERFVAIGTSLGGLLTML 113
Query: 270 LAVKHPGSVKSLTLL-APPYYPVPKGAQASQYVMRKVAPRRVWPLI-AFGASMACWYEHI 327
LA +P + + L P + YV + A S Y
Sbjct: 114 LAAANPARIAAAVLNDVGPEVSPEGLERIRGYVGQGRNFETWMHAARALQESSGDVYPDW 173
Query: 328 SRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDG 387
T + + +++ G ++ G ++D
Sbjct: 174 DIT---------QWLRYAKRIMVLGS------SGRIAFDYDMKIAEPFEAPVGATPQVDM 218
Query: 388 YLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIE 432
+ V GE +++ + + + P + +
Sbjct: 219 -WPLFDALATRPLLVLRGETSDILSAQTAAKMAS-RPGVELVTLP 261
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} Length = 266 | Back alignment and structure |
|---|
Score = 73.4 bits (181), Expect = 8e-15
Identities = 38/233 (16%), Positives = 66/233 (28%), Gaps = 55/233 (23%)
Query: 212 YRLFAIDLLGFGRSPKPTDSLYTVREH-LDMIEKSVIEPNKVKSFHIVAHSLGCILALAL 270
+R+ D G G S P YT+ D++E +++ +V+ H + SLG I+ L
Sbjct: 54 FRVLRYDARGHGASSVPPGP-YTLARLGEDVLE--LLDALEVRRAHFLGLSLGGIVGQWL 110
Query: 271 AVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRT 330
A+ P ++ L L A+Q+ R A + +
Sbjct: 111 ALHAPQRIERLVLAN----TSAWLGPAAQWDERIAAVLQAEDMSET-------------- 152
Query: 331 ICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGY-- 388
FL ++ A G
Sbjct: 153 ----------AAGFLGNWFPP----------ALLERAEPVVERFRAML--MATNRHGLAG 190
Query: 389 -LDAVRNH--------VKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIE 432
AVR+ ++ V G D + + I AR+ +
Sbjct: 191 SFAAVRDTDLRAQLARIERPTLVIAGAYDTVTAASHGELIAASIAGARLVTLP 243
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} Length = 266 | Back alignment and structure |
|---|
Score = 73.4 bits (181), Expect = 9e-15
Identities = 34/233 (14%), Positives = 69/233 (29%), Gaps = 56/233 (24%)
Query: 212 YRLFAIDLLGFGRSPKPTDSLYTVREH-LDMIEKSVIEPNKVKSFHIVAHSLGCILALAL 270
+R+ D G G S P YT+ + D++ +++ K+ + S+G + +AL
Sbjct: 53 FRVLRYDTRGHGHSEAPKGP-YTIEQLTGDVLG--LMDTLKIARANFCGLSMGGLTGVAL 109
Query: 271 AVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRT 330
A +H ++ + L + +V R V R A + W+
Sbjct: 110 AARHADRIERVALCN----TAARIGSPEVWVPRAVKARTEGMHALADAVLPRWF------ 159
Query: 331 ICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYL- 389
T + + + ++ +GY
Sbjct: 160 -------------------TAD----------YMEREPVVLAMIRDVF--VHTDKEGYAS 188
Query: 390 --DAVRNH--------VKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIE 432
+A+ +K V G D + + I AR ++
Sbjct: 189 NCEAIDAADLRPEAPGIKVPALVISGTHDLAATPAQGRELAQAIAGARYVELD 241
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A Length = 277 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 9e-15
Identities = 46/269 (17%), Positives = 82/269 (30%), Gaps = 49/269 (18%)
Query: 184 TLFVKTQGP-------------SAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD 230
L+ + G W E A YR+ D GFG+S +PT
Sbjct: 14 DLYYEDHGTGQPVVLIHGFPLSGHSW-ERQSAALLDAG---YRVITYDRRGFGQSSQPTT 69
Query: 231 SLYTVREHL--DMIEKSVIEPNKVKSFHIVAHSLG-CILALALAVKHPGSVKSLTLLAPP 287
Y + D+ V+E ++ +V S G +A ++ + + LA
Sbjct: 70 G-YDY-DTFAADLNT--VLETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLA-- 123
Query: 288 YYPVPKGAQASQYVMRKVAPRRVWPLIAFG--ASMACWYEHISRTICLLICKNHRVWEFL 345
+ + AP+ + I A +Y L + + +
Sbjct: 124 --SLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNL---DENLGTRI 178
Query: 346 AKLVTRNRIRTFLLEGFFCH-THNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFH 404
++ RN T GFF W+T + + + H
Sbjct: 179 SEEAVRNSWNTAASGGFFAAAAAPTTWYTD----------FRADIPRID----VPALILH 224
Query: 405 GEDDELIPVECS-YNVQRKIPRARVKVIE 432
G D +P+E + + +P A +E
Sbjct: 225 GTGDRTLPIENTARVFHKALPSAEYVEVE 253
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A Length = 318 | Back alignment and structure |
|---|
Score = 73.6 bits (181), Expect = 1e-14
Identities = 19/83 (22%), Positives = 31/83 (37%)
Query: 210 STYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALA 269
R DL+G G+S K + Y + +H + N K V H G LA
Sbjct: 68 PVARCIIPDLIGMGKSGKSGNGSYRLLDHYKYLTAWFELLNLPKKIIFVGHDWGAALAFH 127
Query: 270 LAVKHPGSVKSLTLLAPPYYPVP 292
A +H +K++ + +
Sbjct: 128 YAYEHQDRIKAIVHMESVVDVIE 150
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} PDB: 1va4_A 3hi4_A 3hea_A Length = 271 | Back alignment and structure |
|---|
Score = 72.7 bits (179), Expect = 2e-14
Identities = 52/288 (18%), Positives = 83/288 (28%), Gaps = 79/288 (27%)
Query: 193 SAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDS---------LYTVREHLDMIE 243
+ W E SS YR A D GFGRS +P + + EHLD
Sbjct: 32 ADMW-EYQMEYLSSRG---YRTIAFDRRGFGRSDQPWTGNDYDTFADDIAQLIEHLD--- 84
Query: 244 KSVIEPNKVKSFHIVAHSLGC-ILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVM 302
+K +V S+G +A +A V L LL GA +
Sbjct: 85 --------LKEVTLVGFSMGGGDVARYIARHGSARVAGLVLL---------GAVTPLFGQ 127
Query: 303 RKVAPRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTF--LLE 360
+ P+ V V+ + ++R +
Sbjct: 128 KPDYPQGVPL---------------------------DVFARFKTELLKDRAQFISDFNA 160
Query: 361 GFF--CHTHNAAWHTLHNII-CGTANKLDGYLDAVRNHVKCDVN-----------VFHGE 406
F+ + + L +D V + D V HG+
Sbjct: 161 PFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHGD 220
Query: 407 DDELIPVECS-YNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEE 453
D+++P E + I A +KV + H V + +L
Sbjct: 221 GDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAVT-HAQQLNEDLLA 267
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 Length = 275 | Back alignment and structure |
|---|
Score = 71.9 bits (177), Expect = 3e-14
Identities = 48/285 (16%), Positives = 85/285 (29%), Gaps = 79/285 (27%)
Query: 184 TLFVKTQGP---------------SAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKP 228
+F K GP + W + F S YR+ A D G GRS +P
Sbjct: 10 NIFYKDWGPRDGLPVVFHHGWPLSADDW-DNQMLFFLSHG---YRVIAHDRRGHGRSDQP 65
Query: 229 TDSLYTVREHL--DMIEKSVIEPNKVKSFHIVAHSLGC-ILALALAVKHPGSVKSLTLL- 284
+ + + + D+ + E ++ + HS G +A +A PG V L+
Sbjct: 66 STG-HDM-DTYAADVAA--LTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVS 121
Query: 285 -APPYYPV----PKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKNH 339
PP P G + + A +Y
Sbjct: 122 AVPPVMVKSDTNPDGLPLEVFDEFRAALAANRAQFYIDVPSGPFYG-------------- 167
Query: 340 RVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCD 399
+ V++ I + L+G A + + + + + D
Sbjct: 168 --FNREGATVSQGLIDHWWLQG-----MMGAAN--------------AHYECIAAFSETD 206
Query: 400 VN-----------VFHGEDDELIPVECSYNVQRK-IPRARVKVIE 432
V HG DD+++P + + + A +K E
Sbjct: 207 FTDDLKRIDVPVLVAHGTDDQVVPYADAAPKSAELLANATLKSYE 251
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A Length = 310 | Back alignment and structure |
|---|
Score = 72.5 bits (178), Expect = 3e-14
Identities = 27/115 (23%), Positives = 44/115 (38%), Gaps = 2/115 (1%)
Query: 208 SKSTYRLFAIDLLGFGRSPKPTD-SLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCIL 266
++S R+ A D GFG+S KP D YT H + + ++IE +++ +V G L
Sbjct: 71 AESGARVIAPDFFGFGKSDKPVDEEDYTFEFHRNFLL-ALIERLDLRNITLVVQDWGGFL 129
Query: 267 ALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMA 321
L L + P K L ++ P A + + A
Sbjct: 130 GLTLPMADPSRFKRLIIMNAXLMTDPVTQPAFSAFVTQPADGFTAWKYDLVTPSD 184
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* Length = 398 | Back alignment and structure |
|---|
Score = 72.5 bits (177), Expect = 6e-14
Identities = 33/264 (12%), Positives = 70/264 (26%), Gaps = 21/264 (7%)
Query: 191 GPSAFWT---ETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYT--------VREHL 239
W L + + + ++ ID + G S R+ L
Sbjct: 63 MSKVVWEYYLPRLVAADAEGNYAIDKVLLIDQVNHGDSAVRNRGRLGTNFNWIDGARDVL 122
Query: 240 DMIEKSVIEPNKVKSFHI-VAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQAS 298
+ + + + ++ + HS+G ALA V P L L+ P
Sbjct: 123 KIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVVITRKAIGAGR 182
Query: 299 QYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFL 358
+ + + + + + +N + + +N I
Sbjct: 183 PGLPPDSPQIPENLYNSLRLKTCDHFA--NESEYVKYMRNGSFFTNAHSQILQNIIDFER 240
Query: 359 LEGFFCHTHNAAWHT----LHNIIC--GTANKLDGYLDAVRNHVKCDVNVFHGEDDELIP 412
+ T N++C + V+ V+ G P
Sbjct: 241 TKASGDDEDGGPVRTKMEQAQNLLCYMNMQTFAPFLISNVK-FVRKRTIHIVGARSNWCP 299
Query: 413 VECSYNVQRKIPRARVKVIEKKDH 436
+ +Q+ + + VI H
Sbjct: 300 PQNQLFLQKTLQNYHLDVIPGGSH 323
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A Length = 456 | Back alignment and structure |
|---|
Score = 72.5 bits (178), Expect = 6e-14
Identities = 46/269 (17%), Positives = 84/269 (31%), Gaps = 49/269 (18%)
Query: 184 TLFVKTQGP-------------SAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD 230
L+ + G W E A YR+ D GFG+S +PT
Sbjct: 15 DLYYEDHGTGVPVVLIHGFPLSGHSW-ERQSAALLDAG---YRVITYDRRGFGQSSQPTT 70
Query: 231 SLYTVREHL--DMIEKSVIEPNKVKSFHIVAHSLG-CILALALAVKHPGSVKSLTLLAPP 287
Y + D+ V+E ++ +V S+G +A ++ + ++ LA
Sbjct: 71 G-YDY-DTFAADLNT--VLETLDLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLA-- 124
Query: 288 YYPVPKGAQASQYVMRKVAPRRVWPLIAFG--ASMACWYEHISRTICLLICKNHRVWEFL 345
+ + AP+ + I A +Y L + + +
Sbjct: 125 --SLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNL---DENLGTRI 179
Query: 346 AKLVTRNRIRTFLLEGFF-CHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFH 404
++ RN T GFF W+T + + + H
Sbjct: 180 SEEAVRNSWNTAASGGFFAAAAAPTTWYTD----------FRADIPRID----VPALILH 225
Query: 405 GEDDELIPVECS-YNVQRKIPRARVKVIE 432
G D +P+E + + +P A +E
Sbjct: 226 GTGDRTLPIENTARVFHKALPSAEYVEVE 254
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A Length = 276 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 8e-14
Identities = 52/303 (17%), Positives = 91/303 (30%), Gaps = 66/303 (21%)
Query: 184 TLFVKTQGP---------------SAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKP 228
+F K GP + W + F + YR+ A D G GRS +
Sbjct: 11 QIFYKDWGPRDAPVIHFHHGWPLSADDW-DAQLLFFLAHG---YRVVAHDRRGHGRSSQV 66
Query: 229 T---------DSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGS-V 278
D + V HL ++ V HS G + +HP V
Sbjct: 67 WDGHDMDHYADDVAAVVAHLG-----------IQGAVHVGHSTGGGEVVRYMARHPEDKV 115
Query: 279 KSLTLLAP-PYYPVPKGAQASQYVMRKVAPRRVWPLIAFG--ASMACWYEHISRTICLLI 335
L+A P V P+ V+ ++ A +Y +
Sbjct: 116 AKAVLIAAVPPLMVQTPGNPGG------LPKSVFDGFQAQVASNRAQFYRDVPAGPFYG- 168
Query: 336 CKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNH 395
+ + I + +G ++ D + + ++
Sbjct: 169 ------YNRPGVEASEGIIGNWWRQGMIGSAKAHYD------GIVAFSQTD-FTEDLKG- 214
Query: 396 VKCDVNVFHGEDDELIPVECSYNVQRK-IPRARVKVIEKKDHITIVVGRQKTFARELEEI 454
++ V V HG+DD+++P E S + K +P +K + H +L
Sbjct: 215 IQQPVLVMHGDDDQIVPYENSGVLSAKLLPNGALKTYKGYPHGMPTT-HADVINADLLAF 273
Query: 455 WRS 457
RS
Sbjct: 274 IRS 276
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} Length = 207 | Back alignment and structure |
|---|
Score = 69.1 bits (169), Expect = 8e-14
Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 8/102 (7%)
Query: 193 SAFWTET-LFPNFSSASKSTYRLFAIDLLGFGRSPKPTD---SLYTVREHLDMIEKSVIE 248
S W + LF N+S Y ++A D GFGRS ++ + I + ++
Sbjct: 40 SMDWDKADLFNNYSKIG---YNVYAPDYPGFGRSASSEKYGIDRGDLKHAAEFI-RDYLK 95
Query: 249 PNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYP 290
N V I+ S+G + + +++P V + +AP +
Sbjct: 96 ANGVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPAWVE 137
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 Length = 210 | Back alignment and structure |
|---|
Score = 68.0 bits (166), Expect = 2e-13
Identities = 17/98 (17%), Positives = 33/98 (33%), Gaps = 2/98 (2%)
Query: 193 SAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKV 252
S W +++ YR AIDL G G S + +V++ ++
Sbjct: 45 SETWQN--LGTLHRLAQAGYRAVAIDLPGLGHSKEAAAPAPIGELAPGSFLAAVVDALEL 102
Query: 253 KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYP 290
+++ SL + +L + +AP
Sbjct: 103 GPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTD 140
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} Length = 262 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 4e-13
Identities = 35/249 (14%), Positives = 56/249 (22%), Gaps = 47/249 (18%)
Query: 212 YRLFAIDLLGFGRSPKPTDSLYTVREH-------LDMIEKSVIEPNKVKSFHIVAHSLGC 264
+ + D G G S Y V +D + + S G
Sbjct: 50 FTVICYDRRGRGDSGDTPP--YAVEREIEDLAAIIDAAGGAA---------FVFGMSSGA 98
Query: 265 ILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWY 324
L+L A + L + PPY R+ L+A G
Sbjct: 99 GLSLLAAASGLP-ITRLAVFEPPYAVDDSRPPVPPDYQ-----TRLDALLAEGRRGD-AV 151
Query: 325 EHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANK 384
+ LV + + + + G H +
Sbjct: 152 TYFMT----------EGVGVPPDLVAQMQ-QAPMWPGMEAVAHTLPYD------HAVMGD 194
Query: 385 LDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQ 444
+ V G + + IP AR +E + H
Sbjct: 195 NTIPTARFA-SISIPTLVMDGGASPAWIRHTAQELADTIPNARYVTLENQTHTV----AP 249
Query: 445 KTFARELEE 453
A L E
Sbjct: 250 DAIAPVLVE 258
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} Length = 309 | Back alignment and structure |
|---|
Score = 68.9 bits (169), Expect = 4e-13
Identities = 36/233 (15%), Positives = 65/233 (27%), Gaps = 28/233 (12%)
Query: 212 YRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALA 271
YR A DL+G G S KP Y +++H+ ++ I+ + +V H G ++ + A
Sbjct: 57 YRAVAPDLIGMGDSAKPDIE-YRLQDHVAYMD-GFIDALGLDDMVLVIHDWGSVIGMRHA 114
Query: 272 VKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTI 331
+P V ++ + P + + +
Sbjct: 115 RLNPDRVAAVAFMEALVPPAL-----------PMPSYEAMGPQLGPLFRDLRTADVGEKM 163
Query: 332 CLLICKNHRVWEFLAKLVTRNRI---------RTFLLEGFFCHTHNAAWHTLHNIICGTA 382
L N V L ++ + F T W I A
Sbjct: 164 VLD--GNFFVETILPEMGVVRSLSEAEMAAYRAPFPTRQSRLPTLQ--WPREVPIGGEPA 219
Query: 383 NKLDGYLDAVRNHVKCDVNVF--HGEDDELIPVECSYNVQRKIPRARVKVIEK 433
L + + H E L P + +P V+ +
Sbjct: 220 FAEAEVLKNGEWLMASPIPKLLFHAEPGALAPKPVVDYLSENVPNLEVRFVGA 272
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 Length = 273 | Back alignment and structure |
|---|
Score = 67.8 bits (166), Expect = 7e-13
Identities = 42/273 (15%), Positives = 80/273 (29%), Gaps = 80/273 (29%)
Query: 193 SAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKP---------TDSLYTVREHLDMIE 243
+ W E+ ++ YR+ A D G GRS +P D L + EHLD
Sbjct: 32 ADSW-ESQMIFLAAQG---YRVIAHDRRGHGRSSQPWSGNDMDTYADDLAQLIEHLD--- 84
Query: 244 KSVIEPNKVKSFHIVAHSLGCILALALAVKH-PGSVKSLTLLAPPYYPVPKGAQASQYVM 302
++ + S G +H V L+ A +
Sbjct: 85 --------LRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLI---------SAVPPLMLK 127
Query: 303 RKVAPRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTF--LLE 360
+ P + V++ + + +R + + L
Sbjct: 128 TEANPGGLPM---------------------------EVFDGIRQASLADRSQLYKDLAS 160
Query: 361 GFFCHTHNAAWHTLHNII-----CGTANKLDGYLDAVRNHVKCDVN-----------VFH 404
G F + + ++ G A D ++ + D V H
Sbjct: 161 GPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTEDLKKIDVPTLVVH 220
Query: 405 GEDDELIPVECS-YNVQRKIPRARVKVIEKKDH 436
G+ D+++P+E S + + +K+ H
Sbjct: 221 GDADQVVPIEASGIASAALVKGSTLKIYSGAPH 253
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A Length = 297 | Back alignment and structure |
|---|
Score = 67.4 bits (165), Expect = 1e-12
Identities = 21/88 (23%), Positives = 32/88 (36%), Gaps = 3/88 (3%)
Query: 210 STYRLFAIDLLGFGRSPKPTDS---LYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCIL 266
RL A DL+G G S K + S Y+ E D + + +V H G L
Sbjct: 53 GLGRLVACDLIGMGASDKLSPSGPDRYSYGEQRDFLFALWDALDLGDHVVLVLHDWGSAL 112
Query: 267 ALALAVKHPGSVKSLTLLAPPYYPVPKG 294
A +H V+ + + P+
Sbjct: 113 GFDWANQHRDRVQGIAFMEAIVTPMTWA 140
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} Length = 297 | Back alignment and structure |
|---|
Score = 67.5 bits (165), Expect = 1e-12
Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 2/110 (1%)
Query: 212 YRLFAIDLLGFGRSPKPTD-SLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALAL 270
R+ A DL GFGRS KPTD ++YT H + + ++ +++ +V G IL L L
Sbjct: 74 GRVVAPDLFGFGRSDKPTDDAVYTFGFHRRSLL-AFLDALQLERVTLVCQDWGGILGLTL 132
Query: 271 AVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASM 320
V P V L ++ + + VA +
Sbjct: 133 PVDRPQLVDRLIVMNTALAVGLSPGKGFESWRDFVANSPDLDVGKLMQRA 182
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 1cqw_A 2v9z_A Length = 299 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 2e-12
Identities = 24/108 (22%), Positives = 43/108 (39%), Gaps = 5/108 (4%)
Query: 210 STYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALA 269
++R A DL+G G+S KP Y +H+ ++ IE ++ +V H G L
Sbjct: 57 PSHRCIAPDLIGMGKSDKPDLD-YFFDDHVRYLDA-FIEALGLEEVVLVIHDWGSALGFH 114
Query: 270 LAVKHPGSVKSLTLL-APPYYPVPKGAQASQYVMRKVAPRRVWPLIAF 316
A ++P VK + + P P + ++ R +
Sbjct: 115 WAKRNPERVKGIACMEFIR--PFPTWDEWPEFARETFQAFRTADVGRE 160
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} Length = 286 | Back alignment and structure |
|---|
Score = 66.7 bits (163), Expect = 2e-12
Identities = 39/256 (15%), Positives = 76/256 (29%), Gaps = 54/256 (21%)
Query: 191 GPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRS-PKPTD-SLYT----------VREH 238
G +A+ ++ +R+ D G GRS P D L+T + E
Sbjct: 36 GGNAYVLREGLQDYLE----GFRVVYFDQRGSGRSLELPQDPRLFTVDALVEDTLLLAEA 91
Query: 239 LDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVP--KGAQ 296
L +E+ F ++AH G ++AL + + P + ++ L +P + A+
Sbjct: 92 LG-VER----------FGLLAHGFGAVVALEVLRRFPQAEGAILLAPWVNFPWLAARLAE 140
Query: 297 ASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRT 356
A+ + + A + + T +
Sbjct: 141 AAGLAPLPDPEENLKEALKREEPKALFDRLMFPTPRGRMAYEWLAEGA------------ 188
Query: 357 FLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECS 416
+ + +LD Y + + + V GE D
Sbjct: 189 ---------GILGSDAPGLAFLRNGLWRLD-YTPYLTPE-RRPLYVLVGERDGTSYPYAE 237
Query: 417 YNVQRKIPRARVKVIE 432
R RA ++V+
Sbjct: 238 EVASR--LRAPIRVLP 251
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* Length = 316 | Back alignment and structure |
|---|
Score = 66.6 bits (163), Expect = 3e-12
Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Query: 210 STYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALA 269
A DL+GFG+S KP + Y +H+ ++ + IE V S ++VA G LA
Sbjct: 54 PVAHCIAPDLIGFGQSGKPDIA-YRFFDHVRYLD-AFIEQRGVTSAYLVAQDWGTALAFH 111
Query: 270 LAVKHPGSVKSLTLL-APPYYPVPKGAQASQYVMRKVAPRRVWPLIAF 316
LA + P V+ L + P + ++ + +
Sbjct: 112 LAARRPDFVRGLAFMEFIRPMPTWQDFHHTEVAEEQDHAEAARAVFRK 159
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* Length = 356 | Back alignment and structure |
|---|
Score = 66.2 bits (161), Expect = 5e-12
Identities = 32/157 (20%), Positives = 55/157 (35%), Gaps = 26/157 (16%)
Query: 184 TLFVKTQGPSAFWTETL-----FPNFSSA--------SKSTYRLFAIDLLGFGRSPKPTD 230
+ P + FP + + + YR+ AID G+GRS K
Sbjct: 14 RIHAVADSPPDQQGPLVVLLHGFPESWYSWRHQIPALAGAGYRVVAIDQRGYGRSSKYRV 73
Query: 231 -SLYTVREHL-DMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPY 288
Y ++E + D++ V++ + +V H G +A A HP + ++ P+
Sbjct: 74 QKAYRIKELVGDVVG--VLDSYGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPF 131
Query: 289 YPVPKGA---------QASQYVMRKVAPRRVWPLIAF 316
+ S Y + P RVW F
Sbjct: 132 AGRGVIGLPGSPFGERRPSDYHLELAGPGRVWYQDYF 168
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A Length = 302 | Back alignment and structure |
|---|
Score = 65.2 bits (159), Expect = 6e-12
Identities = 22/88 (25%), Positives = 32/88 (36%), Gaps = 3/88 (3%)
Query: 210 STYRLFAIDLLGFGRSPKPTDS---LYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCIL 266
RL A DL+G G S K S Y EH D ++ + +V H G L
Sbjct: 54 GLGRLIACDLIGMGDSDKLDPSGPERYAYAEHRDYLDALWEALDLGDRVVLVVHDWGSAL 113
Query: 267 ALALAVKHPGSVKSLTLLAPPYYPVPKG 294
A +H V+ + + P+
Sbjct: 114 GFDWARRHRERVQGIAYMEAIAMPIEWA 141
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P Length = 316 | Back alignment and structure |
|---|
Score = 65.2 bits (159), Expect = 7e-12
Identities = 29/234 (12%), Positives = 66/234 (28%), Gaps = 28/234 (11%)
Query: 207 ASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHL-DMIEKSVIE---PNKVKSFHIVAHSL 262
S+ R+ A+DL G + + D+ V+E + ++ HS+
Sbjct: 62 ISRVQCRIVALDLRSHGETKVKNPEDLSAETMAKDVGN--VVEAMYGDLPPPIMLIGHSM 119
Query: 263 GCILALALAVKH-PGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMA 321
G +A+ A + S+ L ++ + Q +R P F +
Sbjct: 120 GGAIAVHTASSNLVPSLLGLCMIDVVEGTAMDALNSMQNFLRG------RPK-TFKSLEN 172
Query: 322 CWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGT 381
+ R E + + + + + + T
Sbjct: 173 AIEWSVKSG-------QIRNLESARVSMVGQVKQCEGITSPEGSKKDHPYTWRIELA-KT 224
Query: 382 ANKLDGYLDAVRN---HVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIE 432
DG+ + N + D L + + + +++V+
Sbjct: 225 EKYWDGWFRGLSNLFLSCPIPKLLLLAGVDRLDKDL---TIGQMQGKFQMQVLP 275
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} Length = 264 | Back alignment and structure |
|---|
Score = 64.1 bits (156), Expect = 1e-11
Identities = 15/123 (12%), Positives = 41/123 (33%), Gaps = 10/123 (8%)
Query: 212 YRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALA 271
+ + D G + + + + + I+ ++ F +V+ S GC + + +
Sbjct: 48 FHVICPDWRGHDAKQTDSGD-FDSQTLAQDLL-AFIDAKGIRDFQMVSTSHGCWVNIDVC 105
Query: 272 VK-HPGSVKSLTLLAPPYYPVP-------KGAQASQYVMRKVAPRRVWPLIAFGASMACW 323
+ + ++ P P +G ++YV + + W A +
Sbjct: 106 EQLGAARLPKTIIIDWLLQPHPGFWQQLAEGQHPTEYVAGRQSFFDEWAETTDNADVLNH 165
Query: 324 YEH 326
+
Sbjct: 166 LRN 168
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 Length = 264 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 3e-11
Identities = 29/239 (12%), Positives = 66/239 (27%), Gaps = 55/239 (23%)
Query: 208 SKSTYRLFAIDLLGFGRSPKP-TDSLYTVREHL-DMIEKSVIEPNKVKSFHIVAHSLGCI 265
+++ +DL G G +P+ D+ E + ++ V V +V +SLG
Sbjct: 40 ARTQCAALTLDLPGHGTNPERHCDNFAEAVEMIEQTVQAHVTSEVPV---ILVGYSLGGR 96
Query: 266 LALALAVKHPGSVKSLTLL--APPYYPVPKGAQASQYVMRKVAPRRV-----WPLIAFGA 318
L + + S +L ++ + + + + + P+ +
Sbjct: 97 LIMHGLAQGAFSRLNLRGAIIEGGHFGLQE--NEEKAARWQHDQQWAQRFSQQPIEHVLS 154
Query: 319 SMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTF--LLEGFFCHTHNAAWHTLHN 376
WY+ + NH + L + N + +L L
Sbjct: 155 D---WYQ-----QAVFSSLNHEQRQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQA 206
Query: 377 IICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKI---PRARVKVIE 432
+ K ++ GE D +++ +
Sbjct: 207 L-------------------KLPIHYVCGEQDSKF---------QQLAESSGLSYSQVA 237
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A Length = 247 | Back alignment and structure |
|---|
Score = 60.9 bits (148), Expect = 1e-10
Identities = 34/249 (13%), Positives = 62/249 (24%), Gaps = 66/249 (26%)
Query: 212 YRLFAIDLLGFGRSP------KPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCI 265
Y A G G P P D V + ++ E + SLG +
Sbjct: 44 YTCHAPIYKGHGVPPEELVHTGPDDWWQDVMNGYEFLKNKGYEK-----IAVAGLSLGGV 98
Query: 266 LALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYV--MRKVAPRRVWPLIAFGASMACW 323
+L L P ++ + + P Y + + R+ R M +
Sbjct: 99 FSLKLGYTVP--IEGIVTMCAPMYIKSEETMYEGVLEYAREYKKREGKSEEQIEQEMEKF 156
Query: 324 YEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTAN 383
+ +T+ L I
Sbjct: 157 KQTPMKTL-----------------------------KALQELIADVRDHLDLI------ 181
Query: 384 KLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKI--PRARVKVIEKKDH-ITIV 440
V DE+I + + + +I P ++K E+ H IT+
Sbjct: 182 -------------YAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLD 228
Query: 441 VGRQKTFAR 449
+ +
Sbjct: 229 QEKDQLHED 237
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* Length = 555 | Back alignment and structure |
|---|
Score = 62.2 bits (151), Expect = 1e-10
Identities = 29/148 (19%), Positives = 55/148 (37%), Gaps = 24/148 (16%)
Query: 177 WSSSSRDTLFVKTQGP-SAFWTETLFPNFSSA--------SKSTYRLFAIDLLGFGRSPK 227
+ R L G A FP + +++ YR+ A+D+ G+G S
Sbjct: 242 VTVKPRVRLHFVELGSGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSA 301
Query: 228 PTD-SLYTVREHL--DMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLL 284
P + Y + E L +M+ ++ + + H G +L +A+ +P V+++ L
Sbjct: 302 PPEIEEYCM-EVLCKEMVT--FLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASL 358
Query: 285 APPYYPV---------PKGAQASQYVMR 303
P+ P K Y +
Sbjct: 359 NTPFIPANPNMSPLESIKANPVFDYQLY 386
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} Length = 270 | Back alignment and structure |
|---|
Score = 59.8 bits (145), Expect = 3e-10
Identities = 31/247 (12%), Positives = 62/247 (25%), Gaps = 63/247 (25%)
Query: 212 YRLFAIDLLGFGRSP------KPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCI 265
Y + L G G D + +V E +++ + ++ + S+G
Sbjct: 68 YTVCLPRLKGHGTHYEDMERTTFHDWVASVEEGYGWLKQ------RCQTIFVTGLSMGGT 121
Query: 266 LALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYE 325
L L LA HP + + A P + + L YE
Sbjct: 122 LTLYLAEHHPDICGIVPINAAVDIPAIAAGMTGGGELPRYLDSIGSDLKNPDVKEL-AYE 180
Query: 326 HISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKL 385
+L + A
Sbjct: 181 KTP------------------------------------------TASLLQLARLMA--- 195
Query: 386 DGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKI--PRARVKVIEKKDH-ITIVVG 442
A + + C +F ++D ++P + + + I + + H T+
Sbjct: 196 --QTKAKLDRIVCPALIFVSDEDHVVPPGNADIIFQGISSTEKEIVRLRNSYHVATLDYD 253
Query: 443 RQKTFAR 449
+ R
Sbjct: 254 QPMIIER 260
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A Length = 301 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 2e-09
Identities = 20/102 (19%), Positives = 38/102 (37%), Gaps = 8/102 (7%)
Query: 212 YRLFAIDLLGFGRSPKPTDSLYTVREH-LDMIEKSVIEP-NKVKSFHIVAHSLGCILALA 269
+ + A DL G G+S P Y+ + + + + + + + F +VAH +G
Sbjct: 57 FTVIAPDLPGLGQSEPPKTG-YSGEQVAVYLHK--LARQFSPDRPFDLVAHDIGIWNTYP 113
Query: 270 LAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVW 311
+ VK+ + L + P+P VW
Sbjct: 114 MVVKNQADIARLVYME---APIPDARIYRFPAFTAQGESLVW 152
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A Length = 306 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 2e-09
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 7/81 (8%)
Query: 212 YRLFAIDLLGFGRSPKPTD----SLYTVREH-LDMIEKSVIEPNKVKSFHIVAHSLGCIL 266
+++ DL G+G S P + YT R +IE +E F + H+ G +
Sbjct: 60 FKVIVADLPGYGWSDMPESDEQHTPYTKRAMAKQLIE--AMEQLGHVHFALAGHNRGARV 117
Query: 267 ALALAVKHPGSVKSLTLLAPP 287
+ LA+ PG + L +L
Sbjct: 118 SYRLALDSPGRLSKLAVLDIL 138
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E Length = 320 | Back alignment and structure |
|---|
Score = 57.8 bits (139), Expect = 2e-09
Identities = 18/98 (18%), Positives = 39/98 (39%), Gaps = 8/98 (8%)
Query: 212 YRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALA 271
++ +L GF P + ++ +V+ ++V HS G + + +A
Sbjct: 42 ATVYVANLSGFQSDDGPNGRGEQLLAYVK----TVLAATGATKVNLVGHSQGGLTSRYVA 97
Query: 272 VKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRR 309
P V S+T + P+ G++ + +V +A
Sbjct: 98 AVAPDLVASVTTIGTPHR----GSEFADFVQGVLAYDP 131
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 Length = 294 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 3e-09
Identities = 17/81 (20%), Positives = 32/81 (39%), Gaps = 6/81 (7%)
Query: 212 YRLFAIDLLGFGRSPKPTDSL---YTVREH-LDMIEKSVIEPNKVKSFHIVAHSLGCILA 267
Y + DL GFG S KP + Y++ + D +++ ++ ++V H I+
Sbjct: 56 YDVIVPDLRGFGDSEKPDLNDLSKYSLDKAADDQAA--LLDALGIEKAYVVGHDFAAIVL 113
Query: 268 LALAVKHPGSVKSLTLLAPPY 288
K+ V + P
Sbjct: 114 HKFIRKYSDRVIKAAIFDPIQ 134
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A Length = 251 | Back alignment and structure |
|---|
Score = 56.8 bits (137), Expect = 3e-09
Identities = 29/250 (11%), Positives = 55/250 (22%), Gaps = 71/250 (28%)
Query: 212 YRLFAIDLLGFGRSPKPTDSLYT--------VREHLDMIEKSVIEPNKVKSFHIVAHSLG 263
Y ++ G G + + K + SLG
Sbjct: 50 YGVYVPLFSGHGTVEPLDILTKGNPDIWWAESSAAVAHMTA------KYAKVFVFGLSLG 103
Query: 264 CILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACW 323
I A+ PG + P++ +
Sbjct: 104 GIFAMKALETLPGITAGGVFSS--------------------------PILPGKHHLVPG 137
Query: 324 YEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTAN 383
+ + + L K+ + LA L + + A
Sbjct: 138 FLKYAEYMNRLAGKSDESTQILAYLPGQ-------------------LAAIDQFATTVAA 178
Query: 384 KLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKI---PRARVKVIEKKDH-ITI 439
L+ VK + DEL+ +Y ++ + R + H IT+
Sbjct: 179 DLN--------LVKQPTFIGQAGQDELVDGRLAYQLRDALINAARVDFHWYDDAKHVITV 230
Query: 440 VVGRQKTFAR 449
Sbjct: 231 NSAHHALEED 240
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* Length = 328 | Back alignment and structure |
|---|
Score = 57.0 bits (138), Expect = 4e-09
Identities = 23/104 (22%), Positives = 44/104 (42%), Gaps = 11/104 (10%)
Query: 212 YRLFAIDLLGFGRSPKPTD---SLYTVREHL--DMIEKSVIE--PNKVKSFHIVAHSLGC 264
YR A DL G+G + S +++ HL D++ ++E + +VAH G
Sbjct: 59 YRAVAPDLRGYGDTTGAPLNDPSKFSI-LHLVGDVVA--LLEAIAPNEEKVFVVAHDWGA 115
Query: 265 ILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPR 308
++A L + P VK+L L+ + + ++ +
Sbjct: 116 LIAWHLCLFRPDKVKALVNLSVHFSKRNPKMNVVE-GLKAIYGE 158
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} Length = 291 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 4e-09
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Query: 212 YRLFAIDLLGFGRSPKPTDSL----YTVREH-LDMIEKSVIEPNKVKSFHIVAHSLGCIL 266
+ + A DL G+G S +P Y+ R D +E V+ + F++V H G +
Sbjct: 52 FTVVATDLRGYGDSSRPASVPHHINYSKRVMAQDQVE--VMSKLGYEQFYVVGHDRGARV 109
Query: 267 ALALAVKHPGSVKSLTLL-APP 287
A LA+ HP VK L LL P
Sbjct: 110 AHRLALDHPHRVKKLALLDIAP 131
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A Length = 304 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 4e-09
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 8/82 (9%)
Query: 212 YRLFAIDLLGFGRSPKPTD----SLYTVREH-LDMIEKSVIEPNKVKSFHIVAHSLGCIL 266
Y + DL G+G S KP + Y+ R D E ++ + FH+V H+ G
Sbjct: 52 YTVVCADLRGYGGSSKPVGAPDHANYSFRAMASDQRE--LMRTLGFERFHLVGHARGGRT 109
Query: 267 ALALAVKHPGSVKSLTLL-APP 287
+A+ HP SV SL +L P
Sbjct: 110 GHRMALDHPDSVLSLAVLDIIP 131
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* Length = 303 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 5e-09
Identities = 30/226 (13%), Positives = 66/226 (29%), Gaps = 37/226 (16%)
Query: 212 YRLFAIDLLGFGRSPKP---TDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILAL 268
+FA D +G G+S + + S+ + ++ HS+G +A+
Sbjct: 70 LLVFAHDHVGHGQSEGERMVVSDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAI 129
Query: 269 ALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHIS 328
A + PG + L++P P+ A + + KV V P ++ G +
Sbjct: 130 LTAAERPGHFAGMVLISPLVLANPESATTFKVLAAKV-LNSVLPNLSSGPIDSSV----- 183
Query: 329 RTICLLICKNHRVWEFLAK--LVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLD 386
+ +N + L+ R ++
Sbjct: 184 ------LSRNKTEVDIYNSDPLICRAGLKVCFGIQLL--------------------NAV 217
Query: 387 GYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIE 432
++ + + G D L + +Y + +
Sbjct: 218 SRVERALPKLTVPFLLLQGSADRLCDSKGAYLLMELAKSQDKTLKI 263
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} Length = 342 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 7e-09
Identities = 30/226 (13%), Positives = 66/226 (29%), Gaps = 37/226 (16%)
Query: 212 YRLFAIDLLGFGRSPKP---TDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILAL 268
+FA D +G G+S + + S+ + ++ HS+G +A+
Sbjct: 88 LLVFAHDHVGHGQSEGERMVVSDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAI 147
Query: 269 ALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHIS 328
A + PG + L++P P+ A + + KV V P ++ G +
Sbjct: 148 LTAAERPGHFAGMVLISPLVLANPESATTFKVLAAKV-LNLVLPNLSLGPIDSSV----- 201
Query: 329 RTICLLICKNHRVWEFLAK--LVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLD 386
+ +N + L+ R ++
Sbjct: 202 ------LSRNKTEVDIYNSDPLICRAGLKVCFGIQLL--------------------NAV 235
Query: 387 GYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIE 432
++ + + G D L + +Y + +
Sbjct: 236 SRVERALPKLTVPFLLLQGSADRLCDSKGAYLLMELAKSQDKTLKI 281
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* Length = 251 | Back alignment and structure |
|---|
Score = 54.6 bits (132), Expect = 1e-08
Identities = 29/211 (13%), Positives = 59/211 (27%), Gaps = 64/211 (30%)
Query: 246 VIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKV 305
+ + V ++ HS G + + A +K+L L+P P+ A+ + + K
Sbjct: 93 AKKLDFVTDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMI-PEIARTGELLGLKF 151
Query: 306 APRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCH 365
P + + + + + + RV +F+ K
Sbjct: 152 DPENIPDELDAWDGR-----KLKGNY-VRVAQTIRVEDFVDKY----------------- 188
Query: 366 THNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPR 425
V + HG+ DE +P E S ++
Sbjct: 189 -------------------------------TKPVLIVHGDQDEAVPYEASVAFSKQYKN 217
Query: 426 ARVKVIEKKDHITIVVGRQKTFARELEEIWR 456
++ I H + LE +
Sbjct: 218 CKLVTIPGDTH---------CYDHHLELVTE 239
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 Length = 313 | Back alignment and structure |
|---|
Score = 52.1 bits (124), Expect = 1e-07
Identities = 39/241 (16%), Positives = 73/241 (30%), Gaps = 19/241 (7%)
Query: 210 STYRLFAIDLLGFGRSPKPTD-SLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILAL 268
+ YR+ D G GRS D T + + IE+ V + + S G LAL
Sbjct: 59 AKYRIVLFDQRGSGRSTPHADLVDNTTWDLVADIERLRTHLG-VDRWQVFGGSWGSTLAL 117
Query: 269 ALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHIS 328
A A HP V L L + + W + +S
Sbjct: 118 AYAQTHPQQVTELVLRGI-FLLRRFELEWFYQEGASRLFPDAWEHYLNAIPPVERADLMS 176
Query: 329 RTICLLICKNHRVWEFLAKLVTRNRIRTFLL-------------EGFFCHTHNAAWHTLH 375
L + AK + T L + ++
Sbjct: 177 AFHRRLTSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIENHYFVN 236
Query: 376 NIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKD 435
++L + + + HG D + P++ ++++ + P+A++++
Sbjct: 237 GGFFEVEDQLLRDAHRIAD---IPGVIVHGRYDVVCPLQSAWDLHKAWPKAQLQISPASG 293
Query: 436 H 436
H
Sbjct: 294 H 294
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* Length = 264 | Back alignment and structure |
|---|
Score = 51.5 bits (123), Expect = 1e-07
Identities = 34/236 (14%), Positives = 75/236 (31%), Gaps = 40/236 (16%)
Query: 212 YRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALA 271
+++ A+DL G +P+ D ++T R++ + + + + + ++ HS G +
Sbjct: 38 HKVTAVDLSAAGINPRRLDEIHTFRDYSEPLMEVMASIPPDEKVVLLGHSFGGMSLGLAM 97
Query: 272 VKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTI 331
+P + ++ +P + Y K + ++
Sbjct: 98 ETYPEKISVAVFMS---AMMPDPNHSLTYPFEKYNEKCPADMMLDSQFSTYGNPENPGMS 154
Query: 332 CLLICKNHRVWEF---------LAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHN--IICG 380
+L + + F LAK++TR F + ++ I C
Sbjct: 155 MILGPQFMALKMFQNCSVEDLELAKMLTRPGSLFFQDLAKAKKFSTERYGSVKRAYIFC- 213
Query: 381 TANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDH 436
+D+ PVE + +VK I++ DH
Sbjct: 214 -------------------------NEDKSFPVEFQKWFVESVGADKVKEIKEADH 244
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} Length = 354 | Back alignment and structure |
|---|
Score = 51.9 bits (123), Expect = 2e-07
Identities = 25/248 (10%), Positives = 65/248 (26%), Gaps = 19/248 (7%)
Query: 212 YRLFAIDLLGFGRSPKPTDSLY---------TVREHLDMIEKSVIEPNKVKSFHIVAHSL 262
+ ++ ID P D T + + + + + ++ S
Sbjct: 94 FNVYTIDYRTHYVPPFLKDRQLSFTANWGWSTWISDIKEVVSFIKRDSGQERIYLAGESF 153
Query: 263 GCILALALAVKH-PGSVKSLTLL--APPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGAS 319
G I AL + + +K L LL P + + + + + +I
Sbjct: 154 GGIAALNYSSLYWKNDIKGLILLDGGPTKHGIRPKFYTPEVNSIEEMEAKGIYVIPSRGG 213
Query: 320 M--ACWYEHISRTICLLICKNHR-VWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHN 376
W ++ ++ + +FL + + +
Sbjct: 214 PNNPIWSYALANPDMPSPDPKYKSISDFLMDSLYVTGSANPYDYPYSKKEDMFPILASFD 273
Query: 377 IICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDH 436
L+ L + F E + + + + + +++ H
Sbjct: 274 PYWPYRLSLERDLKFDYEGILVPTIAFVSERFGIQIF----DSKILPSNSEIILLKGYGH 329
Query: 437 ITIVVGRQ 444
+ + G
Sbjct: 330 LDVYTGEN 337
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A Length = 286 | Back alignment and structure |
|---|
Score = 51.3 bits (122), Expect = 2e-07
Identities = 26/240 (10%), Positives = 64/240 (26%), Gaps = 35/240 (14%)
Query: 196 WTETLFPNFSSAS-KSTYRLFAIDLLGFGRSPKPTDSLY---TVREHLDMIEKSVIEPNK 251
+ LF + +D G Y ++ + DMI +++
Sbjct: 51 CFQPLFRFGDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIP-CILQYLN 109
Query: 252 VKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVW 311
+ V G + A+ HP +V+ L L+ P + K+
Sbjct: 110 FSTIIGVGVGAGAYILSRYALNHPDTVEGLVLIN----IDPNAKGWMDWAAHKLTG---L 162
Query: 312 PLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAW 371
+ + + + + ++ + + L + +++N
Sbjct: 163 TSSIPDMILGHLFSQEELSGN-----SELIQKYRGIIQHAPNLENIEL---YWNSYNNRR 214
Query: 372 HTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVI 431
L+ +KC V + G+ + K+ + +
Sbjct: 215 D------------LNFERGGETT-LKCPVMLVVGDQA--PHEDAVVECNSKLDPTQTSFL 259
|
| >3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043} Length = 191 | Back alignment and structure |
|---|
Score = 48.8 bits (116), Expect = 6e-07
Identities = 12/90 (13%), Positives = 27/90 (30%), Gaps = 12/90 (13%)
Query: 226 PKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLA 285
+ +R L + + VI ++ HS G + A + + + + L+A
Sbjct: 56 ADLDRWVLAIRRELSVCTQPVI---------LIGHSFGALAACHVVQQGQEGIAGVMLVA 106
Query: 286 PPYYPVPKGAQASQYVMRKVAPRRVWPLIA 315
P P + + +
Sbjct: 107 PAE---PMRFEIDDRIQASPLSVPTLTFAS 133
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.5 bits (117), Expect = 2e-06
Identities = 60/391 (15%), Positives = 118/391 (30%), Gaps = 113/391 (28%)
Query: 78 KSKIVCLTSSKLHLEEISDTLYTRPSLVSEASKQTVNELKRL--KVDGNVAQSCERIKKG 135
KI+ T K + +S T SL + T +E+K L K + + +
Sbjct: 265 SCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKY---LDCRPQDLP-- 319
Query: 136 TVRSTFTVNSTIIEMLQGKIGGQQSHPIPRWSDCDCKFCTCWSSSSRDTL------FVKT 189
R T N + + I + W + W + D L +
Sbjct: 320 --REVLTTNPRRLSI----IAESIRDGLATWDN--------WKHVNCDKLTTIIESSLNV 365
Query: 190 QGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPK----PTDSL---------YTVR 236
P+ + + + ++ F P PT L V
Sbjct: 366 LEPAEY-------------RKMFDRLSV----F---PPSAHIPTILLSLIWFDVIKSDVM 405
Query: 237 EHLD-MIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSL--TLLAPPYYPVPK 293
++ + + S++E K I S + L L VK +L +++ +Y +P
Sbjct: 406 VVVNKLHKYSLVEKQP-KESTISIPS----IYLELKVKLENE-YALHRSIVD--HYNIP- 456
Query: 294 GAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVT--- 350
+ + P +Y HI L ++ +
Sbjct: 457 ---------KTFDSDDLIPPYLDQY----FYSHIGHH--LKNIEHPERMTLFRMVFLDFR 501
Query: 351 --RNRIRTFLLEGFFCHTHNAAWHTLHNI------ICGTANKLDGYLDAVRNHV-KCDVN 401
+IR + + + +TL + IC K + ++A+ + + K + N
Sbjct: 502 FLEQKIR---HDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEEN 558
Query: 402 VFHGEDDELI------PVECSYN-----VQR 421
+ + +L+ E + VQR
Sbjct: 559 LICSKYTDLLRIALMAEDEAIFEEAHKQVQR 589
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.0 bits (108), Expect = 3e-05
Identities = 85/578 (14%), Positives = 164/578 (28%), Gaps = 173/578 (29%)
Query: 6 CKTKLVLSFTGSLLNKA-VSFIVFS------FLDLFDFLLCMLYKVADFFIEAEWKPCYC 58
CK V S+L+K + I+ S L LF LL ++ F+E + Y
Sbjct: 35 CKD--VQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINY- 91
Query: 59 SSAKEAITSSGKILVSEQGKSKIVCLTSSKLHLEEISDTLYTRPSLVSEAS---KQTVNE 115
+ + S I ++ S + + + D LY + ++ + Q +
Sbjct: 92 ----KFLMS--PIKTEQRQPSMMTRMYIEQR------DRLYNDNQVFAKYNVSRLQPYLK 139
Query: 116 LKR----LKVDGNV--------------AQSC--ERIKKG--------TVRSTFTVNSTI 147
L++ L+ NV C +++ +++ + + +
Sbjct: 140 LRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPET-V 198
Query: 148 IEMLQ---------GKIGGQQSHPIPRWSDCDCKFCTCWSSSSRDTLFVKTQGPSAF--- 195
+EMLQ S I + L +
Sbjct: 199 LEMLQKLLYQIDPNWTSRSDHSSNIKLRIH--------SIQAELRRLLKSKPYENCLLVL 250
Query: 196 ---WTETLFPNFSSASKS--TYRLFAI-DLLGFGRSPKPT----DSLYTVREHLDMIEKS 245
+ F+ + K T R + D L + + T E ++ K
Sbjct: 251 LNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLK- 309
Query: 246 VIE------PNKVKSFHIVAHSLGCILALALAV--------KHPGSVK-------SLTLL 284
++ P +V + + S+ +A ++ KH K SL +L
Sbjct: 310 YLDCRPQDLPREVLTTNPRRLSI---IAESIRDGLATWDNWKHVNCDKLTTIIESSLNVL 366
Query: 285 APPYYPVPKGAQASQYVMRKVAPRRVW-PLIAFGASMACWYEHISRTICLLICKNHRVWE 343
P Y + V P P I W++ I + +++ K H+
Sbjct: 367 EPAEY-------RKMFDRLSVFPPSAHIPTILL---SLIWFDVIKSDVMVVVNKLHK--- 413
Query: 344 FLAKLVTRNRIR-TFLLEGFFC--HTHNAAWHTLHNII----------CG---TANKLDG 387
LV + T + + + LH I LD
Sbjct: 414 --YSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQ 471
Query: 388 YLDAVRNHVKCDVNVFH------GEDDELIP-VECSYN-VQRKIPRAR------------ 427
Y +H+ H E L V + +++KI
Sbjct: 472 Y---FYSHI-----GHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNT 523
Query: 428 VKVIEK-KDHITIVVGRQKTFARELEEIWRSSSGHEPS 464
++ ++ K +I + R + I E +
Sbjct: 524 LQQLKFYKPYICD---NDPKYERLVNAILDFLPKIEEN 558
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* Length = 273 | Back alignment and structure |
|---|
Score = 47.6 bits (113), Expect = 3e-06
Identities = 40/261 (15%), Positives = 87/261 (33%), Gaps = 26/261 (9%)
Query: 212 YRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALA 271
+++ A+DL G + + L T+ ++ + + + + + +V HSLG +
Sbjct: 32 HKVTALDLAASGTDLRKIEELRTLYDYTLPLMELMESLSADEKVILVGHSLGGMNLGLAM 91
Query: 272 VKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTI 331
K+P + + LA +P S +V+ + R P + + Y +
Sbjct: 92 EKYPQKIYAAVFLAA---FMPDSVHNSSFVLEQYNER--TPAENWLDTQFLPYGSPEEPL 146
Query: 332 CLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDA 391
+ + L +L + + + + ++ + +
Sbjct: 147 TSMFFGPKFLAHKLYQLCSPEDLA------LASSLVRPSSLFMEDLSKAKYFTDERFGSV 200
Query: 392 VRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDH---ITIVVGRQKTFA 448
R ++ C +D+ IP E I I+ DH + +
Sbjct: 201 KRVYIVC-------TEDKGIPEEFQRWQIDNIGVTEAIEIKGADHMAMLC----EPQKLC 249
Query: 449 RELEEIWRS-SSGHEPSENHH 468
L EI + +P E+HH
Sbjct: 250 ASLLEIAHKYNMAGDPLEHHH 270
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* Length = 270 | Back alignment and structure |
|---|
Score = 47.5 bits (113), Expect = 3e-06
Identities = 36/227 (15%), Positives = 67/227 (29%), Gaps = 58/227 (25%)
Query: 212 YRLFAIDLLGFGRSP-KPTD-SLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALA 269
D G G S K + ++ E + I V V++ ++V H+ G ++A
Sbjct: 76 IASVRFDFNGHGDSDGKFENMTVLNEIEDANAILNYVKTDPHVRNIYLVGHAQGGVVASM 135
Query: 270 LAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISR 329
LA +P +K + LLAP + + + L ++ +Y
Sbjct: 136 LAGLYPDLIKKVVLLAPAATLKGDALEGNTQGVTYNPDHIPDRLPFKDLTLGGFY----- 190
Query: 330 TICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYL 389
L I + ++E A+ +H
Sbjct: 191 ---LRIAQQLPIYEVSAQF-------------------TKPVCLIH-------------- 214
Query: 390 DAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDH 436
G DD ++ S + + + +IE DH
Sbjct: 215 ---------------GTDDTVVSPNASKKYDQIYQNSTLHLIEGADH 246
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 Length = 131 | Back alignment and structure |
|---|
Score = 45.4 bits (107), Expect = 3e-06
Identities = 14/96 (14%), Positives = 30/96 (31%), Gaps = 12/96 (12%)
Query: 176 CWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTV 235
+ + + ++ W E L Y + +DL G+GR+ P + +
Sbjct: 15 VFDRVGKGPPVLLVAEEASRWPEALPEG--------YAFYLLDLPGYGRTEGPRMAPEEL 66
Query: 236 REHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALA 271
+ + + ++ LG L L
Sbjct: 67 AHFVA----GFAVMMNLGAPWVLLRGLGLALGPHLE 98
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... Length = 257 | Back alignment and structure |
|---|
Score = 45.8 bits (108), Expect = 1e-05
Identities = 32/234 (13%), Positives = 68/234 (29%), Gaps = 38/234 (16%)
Query: 212 YRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALA 271
+++ A+DL G P+ + + + E+ + + + + +V S G + A
Sbjct: 31 HKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEALPPGEKVILVGESCGGLNIAIAA 90
Query: 272 VKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTI 331
K+ + + +P YV+ K+ +P + T
Sbjct: 91 DKYCEKIAAAVFHNS---VLPDTEHCPSYVVDKLMEV--FPDWKDTTYFTYTKDGKEITG 145
Query: 332 CLLICKNHRVWEF---------LAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTA 382
L R + LAK++TR + + ++
Sbjct: 146 LKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLFQNILAKRPFFTKEGYGSIK------- 198
Query: 383 NKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDH 436
+ +V + DE+ E +V +E DH
Sbjct: 199 ----------KIYVWT-------DQDEIFLPEFQLWQIENYKPDKVYKVEGGDH 235
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* Length = 267 | Back alignment and structure |
|---|
Score = 45.7 bits (108), Expect = 1e-05
Identities = 28/234 (11%), Positives = 65/234 (27%), Gaps = 37/234 (15%)
Query: 212 YRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALA 271
+ + A+DL G +PK + ++L + + + + +V H+LG +
Sbjct: 40 HNVTALDLGASGINPKQALQIPNFSDYLSPLMEFMASLPANEKIILVGHALGGLAISKAM 99
Query: 272 VKHPGSVKSLTLLA--PPYYPVPKGAQASQYVMRKVAPRRVWPLIAFG-----ASMACWY 324
P + L+ P + ++ + G ++
Sbjct: 100 ETFPEKISVAVFLSGLMPGPNIDATTVCTKAGSAVLGQLDNCVTYENGPTNPPTTLIAGP 159
Query: 325 EHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHN--IICGTA 382
+ ++ + L LV + + + ++ I+
Sbjct: 160 KFLATNVYHLSP--IEDLALATALVRPLYLYLAEDISKEVVLSSKRYGSVKRVFIVA--- 214
Query: 383 NKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDH 436
+++ + E + K P VK IE DH
Sbjct: 215 -----------------------TENDALKKEFLKLMIEKNPPDEVKEIEGSDH 245
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} Length = 258 | Back alignment and structure |
|---|
Score = 45.4 bits (107), Expect = 2e-05
Identities = 18/74 (24%), Positives = 34/74 (45%)
Query: 212 YRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALA 271
+R+ A++L G P+P ++ TV E+ + +++ + + +V S G I A
Sbjct: 32 HRVTAVELAASGIDPRPIQAVETVDEYSKPLIETLKSLPENEEVILVGFSFGGINIALAA 91
Query: 272 VKHPGSVKSLTLLA 285
P +K L L
Sbjct: 92 DIFPAKIKVLVFLN 105
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A Length = 415 | Back alignment and structure |
|---|
Score = 44.6 bits (105), Expect = 4e-05
Identities = 34/250 (13%), Positives = 77/250 (30%), Gaps = 60/250 (24%)
Query: 191 GPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMI----EKSV 246
G + T+ +K + +D+ G S K + R H ++
Sbjct: 201 GLDSLQTDMWRLFRDHLAKHDIAMLTVDMPSVGYSSKYPLTEDYSRLHQAVLNELFSIPY 260
Query: 247 IEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVA 306
++ ++V ++ G + L+ +K+ +L P + AS ++++
Sbjct: 261 VDHHRV---GLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIH----DIFASPQKLQQM- 312
Query: 307 PRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHT 366
P+ ++A +R+ +++ +
Sbjct: 313 PKMYLDVLA------------------------------------SRLGKSVVDIYSLSG 336
Query: 367 HNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRA 426
AAW + K+ G+L + + K + E D + P + V
Sbjct: 337 QMAAW----------SLKVQGFLSSRK--TKVPILAMSLEGDPVSPYSDNQMVAFFSTYG 384
Query: 427 RVKVIEKKDH 436
+ K I K
Sbjct: 385 KAKKISSKTI 394
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A Length = 181 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 8e-05
Identities = 13/81 (16%), Positives = 25/81 (30%), Gaps = 7/81 (8%)
Query: 212 YRLFAIDLLGFGRSPKPT-DSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALAL 270
+ + + F ++ + + V++ K IVAHS+G L
Sbjct: 31 WSRDKLYAVDFWDKTGTNYNNGPVLSRFVQ----KVLDETGAKKVDIVAHSMGGANTLYY 86
Query: 271 AVKHPGS--VKSLTLLAPPYY 289
G V ++ L
Sbjct: 87 IKNLDGGNKVANVVTLGGANR 107
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* Length = 317 | Back alignment and structure |
|---|
Score = 42.8 bits (100), Expect = 1e-04
Identities = 42/233 (18%), Positives = 68/233 (29%), Gaps = 12/233 (5%)
Query: 210 STYRLFAIDLLGFGRSPKPTD-SLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILAL 268
Y++ D G GRS T + IE+ V+ + + S G LAL
Sbjct: 62 ERYKVLLFDQRGCGRSRPHASLDNNTTWHLVADIERLREMAG-VEQWLVFGGSWGSTLAL 120
Query: 269 ALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHIS 328
A A HP V + L + + W + S + I+
Sbjct: 121 AYAQTHPERVSEMVLRGI-FTLRKQRLHWYYQDGASRFFPEKWERVLSILSDDERKDVIA 179
Query: 329 RTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNII---------C 379
L + +V AKL + T L
Sbjct: 180 AYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYFTHL 239
Query: 380 GTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIE 432
G D L V + HG D V+ ++++ + P A + ++E
Sbjct: 240 GFLESDDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAWPEAELHIVE 292
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 Length = 192 | Back alignment and structure |
|---|
Score = 41.3 bits (96), Expect = 2e-04
Identities = 17/118 (14%), Positives = 42/118 (35%), Gaps = 12/118 (10%)
Query: 212 YRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALA 271
+ +++ + P+ D L T+ + + ++ +VAHSLGC L
Sbjct: 34 VQADILNMPNPLQ-PRLEDWLDTLSLYQHTLHENTY---------LVAHSLGCPAILRFL 83
Query: 272 VKHP--GSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHI 327
++ + L++ +P ++ +++ A +A + I
Sbjct: 84 EHLQLRAALGGIILVSGFAKSLPTLQMLDEFTQGSFDHQKIIESAKHRAVIASKDDQI 141
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} Length = 405 | Back alignment and structure |
|---|
Score = 42.0 bits (98), Expect = 3e-04
Identities = 28/243 (11%), Positives = 64/243 (26%), Gaps = 46/243 (18%)
Query: 191 GPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPN 250
G + + S + Y + +DL G G++P L+ + I ++++
Sbjct: 167 GGDTSREDLFYMLGYSGWEHDYNVLMVDLPGQGKNPN--QGLHFEVDARAAI-SAILDWY 223
Query: 251 KVKSFHIV--AHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPR 308
+ + I S G K
Sbjct: 224 QAPTEKIAIAGFSGGGYFTAQAVEKDK--------------------------------- 250
Query: 309 RVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHN 368
R+ IA + E + + + L +++ T + + + +
Sbjct: 251 RIKAWIAST-PIYDVAEVFRISF------STALKAPKTILKWGSKLVTSVNKVAEVNLNK 303
Query: 369 AAW-HTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRAR 427
AW + I L+ N + G ++ + S + +
Sbjct: 304 YAWQFGQVDFITSVNEVLEQAQIVDYNKIDVPSLFLVGAGEDSELMRQSQVLYDNFKQRG 363
Query: 428 VKV 430
+ V
Sbjct: 364 IDV 366
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} Length = 194 | Back alignment and structure |
|---|
Score = 40.5 bits (94), Expect = 4e-04
Identities = 19/116 (16%), Positives = 38/116 (32%), Gaps = 15/116 (12%)
Query: 179 SSSRDTLFVKTQGPSAFWTETLFPNFSS--ASKSTYRLFAIDLLGFGRSPKPTDSLYTVR 236
+S + V G T + ++ A ++ + + L +
Sbjct: 2 ASPSKAVIVPGNGGGDVTTHGWYGWVKKELEKIPGFQCLAKNMPDPIT-ARESIWLPFME 60
Query: 237 EHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVP 292
L EK++I + HS G I A+ A H V ++ L++ +
Sbjct: 61 TELHCDEKTII----------IGHSSGAIAAMRYAETHR--VYAIVLVSAYTSDLG 104
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} Length = 254 | Back alignment and structure |
|---|
Score = 41.0 bits (95), Expect = 4e-04
Identities = 9/72 (12%), Positives = 22/72 (30%), Gaps = 5/72 (6%)
Query: 226 PKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGS-----VKS 280
+ + + L + + + V HS G + A + G ++
Sbjct: 67 EQNQATPDDWSKWLKIAMEDLKSRYGFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRK 126
Query: 281 LTLLAPPYYPVP 292
L + P+ +
Sbjct: 127 LVAIGSPFNDLD 138
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 Length = 305 | Back alignment and structure |
|---|
Score = 41.1 bits (96), Expect = 5e-04
Identities = 26/231 (11%), Positives = 52/231 (22%), Gaps = 58/231 (25%)
Query: 212 YRLFAIDLLG-FGRSPKPTDSLYTVREHLDMIEKSVIE---PNKVKSFHIVAHSLGCILA 267
+ +F D L G S D + +V ++ ++A SL +A
Sbjct: 63 FHVFRYDSLHHVGLSSGSIDEFTMTTGKNSL--CTVYHWLQTKGTQNIGLIAASLSARVA 120
Query: 268 LALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHI 327
+ + L +A + + + + F
Sbjct: 121 YEVISDLE--LSFLITAVGVVNLRDTLEKALGFDYLSLPIDELPNDLDFEG--------- 169
Query: 328 SRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDG 387
E F W TL + +
Sbjct: 170 ---------------------------HKLGSEVFVRDCFEHHWDTLDSTL--------- 193
Query: 388 YLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKK--DH 436
+ + F +D+ + E Y++ I K+ H
Sbjct: 194 ---DKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSH 241
|
| >2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A Length = 342 | Back alignment and structure |
|---|
Score = 41.1 bits (95), Expect = 6e-04
Identities = 15/117 (12%), Positives = 32/117 (27%), Gaps = 4/117 (3%)
Query: 177 WSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDL--LGFGRSPKPTDSLYT 234
++ + +++ + + +F + S + T
Sbjct: 50 GDNAISFDMPPGNVSGYGTPARSVYAELKARGYNDCEIFGVTYLSSSEQGSAQYNYHSST 109
Query: 235 VREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGS--VKSLTLLAPPYY 289
+ V IVAHS+G ++LA + V+ LA
Sbjct: 110 KYAIIKTFIDKVKAYTGKSQVDIVAHSMGVSMSLATLQYYNNWTSVRKFINLAGGIR 166
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 468 | |||
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 100.0 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 100.0 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 100.0 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 100.0 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 100.0 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 100.0 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 100.0 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 100.0 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 99.98 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 99.98 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 99.98 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 99.98 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 99.98 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 99.98 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 99.98 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 99.97 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 99.97 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 99.97 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 99.97 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 99.97 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 99.97 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 99.97 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 99.97 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 99.97 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 99.97 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 99.97 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 99.97 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 99.97 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 99.97 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 99.97 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 99.97 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 99.97 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 99.97 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 99.97 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 99.97 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 99.97 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 99.97 | |
| 4dnp_A | 269 | DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu | 99.97 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 99.97 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 99.97 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 99.97 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 99.97 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 99.97 | |
| 4g9e_A | 279 | AHL-lactonase, alpha/beta hydrolase fold protein; | 99.97 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 99.97 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 99.97 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 99.97 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 99.96 | |
| 2pl5_A | 366 | Homoserine O-acetyltransferase; alpha/beta hydrola | 99.96 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 99.96 | |
| 4fbl_A | 281 | LIPS lipolytic enzyme; thermostable, structural ge | 99.96 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 99.96 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 99.96 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 99.96 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 99.96 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 99.96 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 99.96 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 99.96 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 99.96 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 99.96 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 99.96 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 99.96 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 99.96 | |
| 3i1i_A | 377 | Homoserine O-acetyltransferase; structural genomic | 99.96 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 99.96 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 99.96 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.96 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 99.96 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 99.95 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 99.95 | |
| 2b61_A | 377 | Homoserine O-acetyltransferase; acyl-enzyme, aspar | 99.95 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 99.95 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 99.95 | |
| 2vat_A | 444 | Acetyl-COA--deacetylcephalosporin C acetyltransfer | 99.95 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 99.95 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 99.95 | |
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 99.95 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 99.95 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 99.95 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 99.94 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 99.94 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 99.9 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 99.94 | |
| 1k8q_A | 377 | Triacylglycerol lipase, gastric; APHA beta hydrola | 99.94 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 99.94 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 99.94 | |
| 3fla_A | 267 | RIFR; alpha-beta hydrolase thioesterase, hydrolase | 99.94 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 99.94 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 99.93 | |
| 1pja_A | 302 | Palmitoyl-protein thioesterase 2 precursor; hydrol | 99.93 | |
| 4i19_A | 388 | Epoxide hydrolase; structural genomics, PSI-biolog | 99.93 | |
| 3g02_A | 408 | Epoxide hydrolase; alpha/beta hydrolase fold, enan | 99.93 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 99.92 | |
| 2qs9_A | 194 | Retinoblastoma-binding protein 9; B5T overexpresse | 99.91 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 99.91 | |
| 3qmv_A | 280 | Thioesterase, REDJ; alpha/beta hydrolase fold, hyd | 99.91 | |
| 3trd_A | 208 | Alpha/beta hydrolase; cellular processes; 1.50A {C | 99.91 | |
| 3h04_A | 275 | Uncharacterized protein; protein with unknown func | 99.9 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 99.9 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 99.9 | |
| 1uxo_A | 192 | YDEN protein; hydrolase, A/B hydrolase, esterase, | 99.9 | |
| 2q0x_A | 335 | Protein DUF1749, uncharacterized protein; alpha/be | 99.89 | |
| 2i3d_A | 249 | AGR_C_3351P, hypothetical protein ATU1826; structu | 99.89 | |
| 1jfr_A | 262 | Lipase; serine hydrolase; 1.90A {Streptomyces exfo | 99.89 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 99.89 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 99.89 | |
| 1qlw_A | 328 | Esterase; anisotropic refinement, atomic resolutio | 99.89 | |
| 3ils_A | 265 | PKS, aflatoxin biosynthesis polyketide synthase; A | 99.88 | |
| 1zi8_A | 236 | Carboxymethylenebutenolidase; alpha and beta prote | 99.88 | |
| 3bdv_A | 191 | Uncharacterized protein DUF1234; DUF1234 family pr | 99.88 | |
| 4fle_A | 202 | Esterase; structural genomics, PSI-biology, northe | 99.88 | |
| 2fuk_A | 220 | XC6422 protein; A/B hydrolase, structural genomics | 99.88 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 99.87 | |
| 2k2q_B | 242 | Surfactin synthetase thioesterase subunit; A/B-hyd | 99.87 | |
| 1fj2_A | 232 | Protein (acyl protein thioesterase 1); alpha/beta | 99.87 | |
| 1kez_A | 300 | Erythronolide synthase; polyketide synthase, modul | 99.87 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 99.87 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 99.87 | |
| 3lcr_A | 319 | Tautomycetin biosynthetic PKS; alpha-beta hydrolas | 99.86 | |
| 3vis_A | 306 | Esterase; alpha/beta-hydrolase fold, polyethylene | 99.86 | |
| 2pbl_A | 262 | Putative esterase/lipase/thioesterase; alpha/beta- | 99.86 | |
| 2r8b_A | 251 | AGR_C_4453P, uncharacterized protein ATU2452; APC6 | 99.86 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 99.86 | |
| 3f67_A | 241 | Putative dienelactone hydrolase; alpha-beta-alpha | 99.86 | |
| 2h1i_A | 226 | Carboxylesterase; structural genomics, PSI-2, prot | 99.86 | |
| 1auo_A | 218 | Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl | 99.86 | |
| 3hxk_A | 276 | Sugar hydrolase; alpha-beta protein., structural g | 99.85 | |
| 3cn9_A | 226 | Carboxylesterase; alpha/beta hydrolase fold super- | 99.85 | |
| 2hdw_A | 367 | Hypothetical protein PA2218; alpha/beta hydrolase | 99.84 | |
| 3bxp_A | 277 | Putative lipase/esterase; putative carboxylesteras | 99.84 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 99.84 | |
| 3bjr_A | 283 | Putative carboxylesterase; structural genomics, jo | 99.84 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 99.83 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 99.83 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 99.83 | |
| 2fx5_A | 258 | Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pse | 99.83 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.83 | |
| 3u0v_A | 239 | Lysophospholipase-like protein 1; alpha, beta hydr | 99.82 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 99.82 | |
| 3d7r_A | 326 | Esterase; alpha/beta fold, hydrolase; 2.01A {Staph | 99.81 | |
| 3og9_A | 209 | Protein YAHD A copper inducible hydrolase; alpha/b | 99.81 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.81 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.8 | |
| 3b5e_A | 223 | MLL8374 protein; NP_108484.1, carboxylesterase, st | 99.8 | |
| 2c7b_A | 311 | Carboxylesterase, ESTE1; carboxyesterase, thermoph | 99.8 | |
| 2o7r_A | 338 | CXE carboxylesterase; alpha/beta hydrolase; 1.40A | 99.8 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.79 | |
| 1jkm_A | 361 | Brefeldin A esterase; serine hydrolase, degradatio | 99.79 | |
| 3lp5_A | 250 | Putative cell surface hydrolase; structural genom | 99.79 | |
| 4ao6_A | 259 | Esterase; hydrolase, thermo label; 1.60A {Unidenti | 99.79 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.78 | |
| 1lzl_A | 323 | Heroin esterase; alpha/beta hydrolase; 1.30A {Rhod | 99.78 | |
| 3ain_A | 323 | 303AA long hypothetical esterase; carboxylesterase | 99.78 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 99.78 | |
| 2wir_A | 313 | Pesta, alpha/beta hydrolase fold-3 domain protein; | 99.78 | |
| 3fle_A | 249 | SE_1780 protein; structural genomics, APC61035.1, | 99.77 | |
| 1jji_A | 311 | Carboxylesterase; alpha-beta hydrolase fold, hydro | 99.77 | |
| 3k6k_A | 322 | Esterase/lipase; alpha/beta hydrolase fold; 2.20A | 99.77 | |
| 3ds8_A | 254 | LIN2722 protein; unkonwn function, structural geno | 99.77 | |
| 4h0c_A | 210 | Phospholipase/carboxylesterase; PSI-biology, midwe | 99.77 | |
| 4e15_A | 303 | Kynurenine formamidase; alpha/beta hydrolase fold, | 99.77 | |
| 2hfk_A | 319 | Pikromycin, type I polyketide synthase pikaiv; alp | 99.76 | |
| 2zsh_A | 351 | Probable gibberellin receptor GID1L1; plant hormon | 99.76 | |
| 1tca_A | 317 | Lipase; hydrolase(carboxylic esterase); HET: NAG; | 99.76 | |
| 2qru_A | 274 | Uncharacterized protein; alpha/beta-hydrolase, str | 99.76 | |
| 3e4d_A | 278 | Esterase D; S-formylglutathione hydrolase, hydrola | 99.76 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.75 | |
| 1ycd_A | 243 | Hypothetical 27.3 kDa protein in AAP1-SMF2 interge | 99.75 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.74 | |
| 2hm7_A | 310 | Carboxylesterase; alpha/beta hydrolase fold, hydro | 99.73 | |
| 3ga7_A | 326 | Acetyl esterase; phosphoserine, IDP00896, hydrolas | 99.73 | |
| 3i6y_A | 280 | Esterase APC40077; lipase, structural genomics, PS | 99.73 | |
| 3fak_A | 322 | Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Unc | 99.73 | |
| 3h2g_A | 397 | Esterase; xanthomonas oryzae PV. oryzae, cell WALL | 99.72 | |
| 3qh4_A | 317 | Esterase LIPW; structural genomics, ssgcid, seattl | 99.72 | |
| 2cb9_A | 244 | Fengycin synthetase; thioesterase, non-ribosomal p | 99.7 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.7 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.7 | |
| 3ls2_A | 280 | S-formylglutathione hydrolase; psychrophilic organ | 99.7 | |
| 3tjm_A | 283 | Fatty acid synthase; thioesterase domain, fatty ac | 99.7 | |
| 3ebl_A | 365 | Gibberellin receptor GID1; alpha/beta hydrolase, l | 99.7 | |
| 1jmk_C | 230 | SRFTE, surfactin synthetase; thioesterase, non-rib | 99.69 | |
| 1ei9_A | 279 | Palmitoyl protein thioesterase 1; alpha/beta hydro | 99.69 | |
| 3fcx_A | 282 | FGH, esterase D, S-formylglutathione hydrolase; re | 99.69 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.69 | |
| 4ezi_A | 377 | Uncharacterized protein; alpha-beta hydrolases fol | 99.67 | |
| 3d0k_A | 304 | Putative poly(3-hydroxybutyrate) depolymerase LPQ; | 99.67 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 99.67 | |
| 3icv_A | 316 | Lipase B, CALB; circular permutation, cleavage on | 99.67 | |
| 3d59_A | 383 | Platelet-activating factor acetylhydrolase; secret | 99.66 | |
| 1lns_A | 763 | X-prolyl dipeptidyl aminopetidase; alpha beta hydr | 99.66 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.66 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 99.65 | |
| 2zyr_A | 484 | Lipase, putative; fatty acid, hydrolase; HET: 1PE; | 99.64 | |
| 4fhz_A | 285 | Phospholipase/carboxylesterase; alpha/beta hydrola | 99.64 | |
| 4b6g_A | 283 | Putative esterase; hydrolase, formaldehyde detoxif | 99.64 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 99.63 | |
| 2uz0_A | 263 | Esterase, tributyrin esterase; alpha/beta hydrolas | 99.63 | |
| 4f21_A | 246 | Carboxylesterase/phospholipase family protein; str | 99.6 | |
| 1gpl_A | 432 | RP2 lipase; serine esterase, hydrolase, lipid degr | 99.58 | |
| 1jjf_A | 268 | Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-x | 99.56 | |
| 1ys1_X | 320 | Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h | 99.55 | |
| 2dst_A | 131 | Hypothetical protein TTHA1544; conserved hypotheti | 99.54 | |
| 1mpx_A | 615 | Alpha-amino acid ester hydrolase; alpha/beta hydro | 99.51 | |
| 1ex9_A | 285 | Lactonizing lipase; alpha-beta hydrolase fold, pho | 99.5 | |
| 1bu8_A | 452 | Protein (pancreatic lipase related protein 2); hyd | 99.49 | |
| 1w52_X | 452 | Pancreatic lipase related protein 2; detergent, cl | 99.49 | |
| 1hpl_A | 449 | Lipase; hydrolase(carboxylic esterase); 2.30A {Equ | 99.48 | |
| 1dqz_A | 280 | 85C, protein (antigen 85-C); fibronectin, structur | 99.47 | |
| 2x5x_A | 342 | PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE | 99.47 | |
| 1rp1_A | 450 | Pancreatic lipase related protein 1; hydrolase, li | 99.46 | |
| 1r88_A | 280 | MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBP | 99.45 | |
| 3n2z_B | 446 | Lysosomal Pro-X carboxypeptidase; alpha/beta hydro | 99.45 | |
| 1sfr_A | 304 | Antigen 85-A; alpha/beta hydrolase, structural gen | 99.42 | |
| 3i2k_A | 587 | Cocaine esterase; alpha/beta hydrolase, hydrolase; | 99.41 | |
| 2b9v_A | 652 | Alpha-amino acid ester hydrolase; catalytic triad, | 99.36 | |
| 2hih_A | 431 | Lipase 46 kDa form; A1 phospholipase, phospholipid | 99.33 | |
| 3guu_A | 462 | Lipase A; protein structure, hydrolase; HET: 1PE; | 99.33 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 99.33 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 99.32 | |
| 2px6_A | 316 | Thioesterase domain; thioesaterse domain, orlistat | 99.32 | |
| 3iii_A | 560 | COCE/NOND family hydrolase; structural genomics, c | 99.3 | |
| 1gkl_A | 297 | Endo-1,4-beta-xylanase Y; hydrolase, esterase fami | 99.27 | |
| 2dsn_A | 387 | Thermostable lipase; T1 lipase, hydrolase; 1.50A { | 99.2 | |
| 2qm0_A | 275 | BES; alpha-beta structure, structural genomics, PS | 99.14 | |
| 3c8d_A | 403 | Enterochelin esterase; alpha-beta-alpha sandwich, | 99.04 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 98.88 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 98.75 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 98.73 | |
| 2gzs_A | 278 | IROE protein; enterobactin, salmochelin, DFP, hydr | 98.65 | |
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 98.58 | |
| 3gff_A | 331 | IROE-like serine hydrolase; NP_718593.1, structura | 98.57 | |
| 1qe3_A | 489 | PNB esterase, para-nitrobenzyl esterase; alpha-bet | 98.43 | |
| 2ogt_A | 498 | Thermostable carboxylesterase EST50; alpha/beta hy | 98.41 | |
| 4fol_A | 299 | FGH, S-formylglutathione hydrolase; D-type esteras | 98.2 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 98.17 | |
| 2fj0_A | 551 | JuvenIle hormone esterase; manduca sexta, alpha-be | 98.12 | |
| 2ha2_A | 543 | ACHE, acetylcholinesterase; hydrolase fold, serine | 98.08 | |
| 2h7c_A | 542 | Liver carboxylesterase 1; enzyme, cholesteryl este | 97.99 | |
| 1p0i_A | 529 | Cholinesterase; serine hydrolase, butyrate, hydrol | 97.99 | |
| 4g4g_A | 433 | 4-O-methyl-glucuronoyl methylesterase; alpha/beta | 97.97 | |
| 1ea5_A | 537 | ACHE, acetylcholinesterase; hydrolase, serine hydr | 97.96 | |
| 1whs_A | 255 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 97.95 | |
| 1ukc_A | 522 | ESTA, esterase; fungi, A/B hydrolase fold, acetylc | 97.88 | |
| 3pic_A | 375 | CIP2; alpha/beta hydrolase fold, glucuronoyl ester | 97.83 | |
| 1thg_A | 544 | Lipase; hydrolase(carboxylic esterase); HET: NAG N | 97.69 | |
| 1llf_A | 534 | Lipase 3; candida cylindracea cholesterol esterase | 97.68 | |
| 1dx4_A | 585 | ACHE, acetylcholinesterase; hydrolase, serine este | 97.67 | |
| 4ebb_A | 472 | Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2 | 97.66 | |
| 3bix_A | 574 | Neuroligin-1, neuroligin I; esterase domain, alpha | 97.49 | |
| 2bce_A | 579 | Cholesterol esterase; hydrolase, serine esterase, | 97.46 | |
| 1whs_B | 153 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 97.39 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 97.38 | |
| 1tgl_A | 269 | Triacyl-glycerol acylhydrolase; carboxylic esteras | 96.85 | |
| 4az3_B | 155 | Lysosomal protective protein 20 kDa chain; hydrola | 96.69 | |
| 1tia_A | 279 | Lipase; hydrolase(carboxylic esterase); 2.10A {Pen | 96.44 | |
| 4az3_A | 300 | Lysosomal protective protein 32 kDa chain; hydrola | 96.42 | |
| 1tib_A | 269 | Lipase; hydrolase(carboxylic esterase); 1.84A {The | 96.25 | |
| 1gxs_A | 270 | P-(S)-hydroxymandelonitrIle lyase chain A; inhibit | 95.83 | |
| 1gxs_B | 158 | P-(S)-hydroxymandelonitrIle lyase chain B; inhibit | 95.78 | |
| 1lgy_A | 269 | Lipase, triacylglycerol lipase; hydrolase (carboxy | 95.46 | |
| 1uwc_A | 261 | Feruloyl esterase A; hydrolase, serine esterase, x | 94.78 | |
| 3g7n_A | 258 | Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A | 94.72 | |
| 3hc7_A | 254 | Gene 12 protein, GP12; alpha/beta sandwich, cell a | 94.68 | |
| 3uue_A | 279 | LIP1, secretory lipase (family 3); LID-domain, hyd | 94.21 | |
| 3ngm_A | 319 | Extracellular lipase; secret lipase, hydrolase; 2. | 93.76 | |
| 3o0d_A | 301 | YALI0A20350P, triacylglycerol lipase; alpha/beta-h | 93.36 | |
| 3qpd_A | 187 | Cutinase 1; alpha-beta hydrolase fold, esterase, h | 90.3 | |
| 3qpa_A | 197 | Cutinase; alpha-beta hydrolase fold, esterase, hyd | 90.25 | |
| 3dcn_A | 201 | Cutinase, cutin hydrolase; catalytic triad, secret | 86.57 | |
| 2ory_A | 346 | Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Ph | 86.39 | |
| 1g66_A | 207 | Acetyl xylan esterase II; serine hydrolase, acetyl | 86.32 | |
| 1qoz_A | 207 | AXE, acetyl xylan esterase; hydrolase, xylan degra | 84.98 | |
| 2yij_A | 419 | Phospholipase A1-iigamma; hydrolase; 2.00A {Arabid | 83.69 |
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-33 Score=263.50 Aligned_cols=253 Identities=17% Similarity=0.205 Sum_probs=171.7
Q ss_pred CCCCceeEEEecC-CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 012188 167 SDCDCKFCTCWSS-SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKS 245 (468)
Q Consensus 167 ~d~~~~~~~~~~~-~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~ 245 (468)
.||..++|..+++ ++|+|||+||++.+...|..+++.|+ ++|+|+++|+||||.|+.+.. .++++++++|+ ..
T Consensus 12 ~~g~~l~y~~~G~~~~p~lvl~hG~~~~~~~w~~~~~~L~----~~~~vi~~D~rG~G~S~~~~~-~~~~~~~a~dl-~~ 85 (266)
T 3om8_A 12 SDGASLAYRLDGAAEKPLLALSNSIGTTLHMWDAQLPALT----RHFRVLRYDARGHGASSVPPG-PYTLARLGEDV-LE 85 (266)
T ss_dssp TTSCEEEEEEESCTTSCEEEEECCTTCCGGGGGGGHHHHH----TTCEEEEECCTTSTTSCCCCS-CCCHHHHHHHH-HH
T ss_pred cCCcEEEEEecCCCCCCEEEEeCCCccCHHHHHHHHHHhh----cCcEEEEEcCCCCCCCCCCCC-CCCHHHHHHHH-HH
Confidence 4777899998876 57899999999987766667889888 799999999999999987664 58999999999 69
Q ss_pred HhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHH
Q 012188 246 VIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYE 325 (468)
Q Consensus 246 l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (468)
+++++++++++++||||||.+|+.+|.++|++|+++|++++........ .................. .......|.
T Consensus 86 ~l~~l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~- 161 (266)
T 3om8_A 86 LLDALEVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAA--QWDERIAAVLQAEDMSET-AAGFLGNWF- 161 (266)
T ss_dssp HHHHTTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCCCSH--HHHHHHHHHHHCSSSHHH-HHHHHHHHS-
T ss_pred HHHHhCCCceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCCchh--HHHHHHHHHHccccHHHH-HHHHHHHhc-
Confidence 9999999999999999999999999999999999999999765432111 011111110000000000 000000000
Q ss_pred HHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEee
Q 012188 326 HISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHG 405 (468)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G 405 (468)
.. ..........+...... .. .....+......+. .......+.++++|+|+|+|
T Consensus 162 --~~---~~~~~~~~~~~~~~~~~-------------~~-~~~~~~~~~~~~~~------~~d~~~~l~~i~~P~Lvi~G 216 (266)
T 3om8_A 162 --PP---ALLERAEPVVERFRAML-------------MA-TNRHGLAGSFAAVR------DTDLRAQLARIERPTLVIAG 216 (266)
T ss_dssp --CH---HHHHSCCHHHHHHHHHH-------------HT-SCHHHHHHHHHHHH------TCBCTTTGGGCCSCEEEEEE
T ss_pred --Ch---hhhhcChHHHHHHHHHH-------------Hh-CCHHHHHHHHHHhh------ccchhhHhcCCCCCEEEEEe
Confidence 00 00000011111110000 00 00000100000010 11122345788999999999
Q ss_pred CCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHh
Q 012188 406 EDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWR 456 (468)
Q Consensus 406 ~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~ 456 (468)
++|.++|++.++.+.+.+|++++++++ +||+++. |+|++|++.|.+||+
T Consensus 217 ~~D~~~~~~~~~~l~~~ip~a~~~~i~-~gH~~~~-e~p~~~~~~i~~Fl~ 265 (266)
T 3om8_A 217 AYDTVTAASHGELIAASIAGARLVTLP-AVHLSNV-EFPQAFEGAVLSFLG 265 (266)
T ss_dssp TTCSSSCHHHHHHHHHHSTTCEEEEES-CCSCHHH-HCHHHHHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHhCCCCEEEEeC-CCCCccc-cCHHHHHHHHHHHhc
Confidence 999999999999999999999999998 7999997 999999999999995
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-33 Score=261.43 Aligned_cols=255 Identities=16% Similarity=0.260 Sum_probs=166.7
Q ss_pred eeEEEecC---CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhc
Q 012188 172 KFCTCWSS---SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIE 248 (468)
Q Consensus 172 ~~~~~~~~---~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~ 248 (468)
++|..+++ ++|+|||+||++++...|..+++.|+ ++|+|+++|+||||.|+.+....++++++++++ ..+++
T Consensus 3 i~y~~~g~~~~~~~~vvllHG~~~~~~~w~~~~~~L~----~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~a~dl-~~~l~ 77 (268)
T 3v48_A 3 MKLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLE----QEYQVVCYDQRGTGNNPDTLAEDYSIAQMAAEL-HQALV 77 (268)
T ss_dssp SCCEECCCSSTTCCEEEEECCTTCCGGGGHHHHHHHH----TTSEEEECCCTTBTTBCCCCCTTCCHHHHHHHH-HHHHH
T ss_pred eEEEecCCCCCCCCEEEEeCCCCccHHHHHHHHHHHh----hcCeEEEECCCCCCCCCCCccccCCHHHHHHHH-HHHHH
Confidence 44454443 57899999999987776667888888 789999999999999987665568999999999 69999
Q ss_pred ccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHh
Q 012188 249 PNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHIS 328 (468)
Q Consensus 249 ~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (468)
.+++++++|+||||||.+++.+|.++|++|+++|++++....... ......... ..........+.....
T Consensus 78 ~l~~~~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~~~~~~~----~~~~~~~~~------~~~~~~~~~~~~~~~~ 147 (268)
T 3v48_A 78 AAGIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAH----TRRCFQVRE------RLLYSGGAQAWVEAQP 147 (268)
T ss_dssp HTTCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHH----HHHHHHHHH------HHHHHHHHHHHHHHHH
T ss_pred HcCCCCeEEEEecHHHHHHHHHHHhChhhceEEEEeccccccchh----hhHHHHHHH------HHHhccchhhhhhhhh
Confidence 999999999999999999999999999999999999975432110 000000000 0000000000000000
Q ss_pred hHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCC
Q 012188 329 RTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDD 408 (468)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D 408 (468)
... .................. ... ..+ .........+.... .......+.++++|+|+|+|++|
T Consensus 148 ----~~~-~~~~~~~~~~~~~~~~~~-~~~-~~~--~~~~~~~~~~~~~~-------~~d~~~~l~~i~~P~Lii~G~~D 211 (268)
T 3v48_A 148 ----LFL-YPADWMAARAPRLEAEDA-LAL-AHF--QGKNNLLRRLNALK-------RADFSHHADRIRCPVQIICASDD 211 (268)
T ss_dssp ----HHH-SCHHHHHTTHHHHHHHHH-HHH-HTC--CCHHHHHHHHHHHH-------HCBCTTTGGGCCSCEEEEEETTC
T ss_pred ----hhc-CchhhhhcccccchhhHH-HHH-hhc--CchhHHHHHHHHHh-------ccchhhhhhcCCCCeEEEEeCCC
Confidence 000 000000000000000000 000 000 00000001111111 01112345788999999999999
Q ss_pred CccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 409 ELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 409 ~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
.++|++.++.+.+.+|++++++++++||+++. |+|++|++.|.+||.+.
T Consensus 212 ~~~p~~~~~~l~~~~p~~~~~~~~~~GH~~~~-e~p~~~~~~i~~fl~~~ 260 (268)
T 3v48_A 212 LLVPTACSSELHAALPDSQKMVMPYGGHACNV-TDPETFNALLLNGLASL 260 (268)
T ss_dssp SSSCTHHHHHHHHHCSSEEEEEESSCCTTHHH-HCHHHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHhCCcCeEEEeCCCCcchhh-cCHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999997 99999999999999764
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-32 Score=255.96 Aligned_cols=256 Identities=19% Similarity=0.300 Sum_probs=166.9
Q ss_pred CCCceeEEEecCCCCeEEEEecCCCCcc---chhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 012188 168 DCDCKFCTCWSSSSRDTLFVKTQGPSAF---WTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEK 244 (468)
Q Consensus 168 d~~~~~~~~~~~~~p~vl~lHG~g~s~~---~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~ 244 (468)
++..++|..++ ++|+|||+||++.+.. .|..+++.|+ ++|+|+++|+||||.|+.+....++++++++++ .
T Consensus 13 ~g~~l~y~~~G-~g~~vvllHG~~~~~~~~~~w~~~~~~L~----~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~a~dl-~ 86 (282)
T 1iup_A 13 AGVLTNYHDVG-EGQPVILIHGSGPGVSAYANWRLTIPALS----KFYRVIAPDMVGFGFTDRPENYNYSKDSWVDHI-I 86 (282)
T ss_dssp TTEEEEEEEEC-CSSEEEEECCCCTTCCHHHHHTTTHHHHT----TTSEEEEECCTTSTTSCCCTTCCCCHHHHHHHH-H
T ss_pred CCEEEEEEecC-CCCeEEEECCCCCCccHHHHHHHHHHhhc----cCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHH-H
Confidence 45567777765 5789999999865332 2334667776 899999999999999987765468999999999 6
Q ss_pred HHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHH
Q 012188 245 SVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWY 324 (468)
Q Consensus 245 ~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (468)
.+++++++++++|+||||||.+|+.+|.++|++|+++|++++........ ...... ... . +.. ..+..+.
T Consensus 87 ~~l~~l~~~~~~lvGhS~GG~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~-~~~~~~---~~~-~--~~~---~~~~~~~ 156 (282)
T 1iup_A 87 GIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVT-EGLNAV---WGY-T--PSI---ENMRNLL 156 (282)
T ss_dssp HHHHHTTCCSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESCCCSCCCCC-HHHHHH---HTC-C--SCH---HHHHHHH
T ss_pred HHHHHhCCCceEEEEECHhHHHHHHHHHHChHHHHHHHeeCCccCCCCCC-HHHHHH---hcC-C--CcH---HHHHHHH
Confidence 99999999999999999999999999999999999999999865432111 111111 000 0 000 0000010
Q ss_pred HHHhhHHHHHhhccchhHHHH-HHHH---hhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcE
Q 012188 325 EHISRTICLLICKNHRVWEFL-AKLV---TRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDV 400 (468)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pv 400 (468)
.. .........+.. .... ......... ..+.... ...+ .. .... ....+.++++|+
T Consensus 157 ~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~---~~-------~~~~-~~~~l~~i~~P~ 216 (282)
T 1iup_A 157 DI-------FAYDRSLVTDELARLRYEASIQPGFQESF-SSMFPEP-RQRW---ID-------ALAS-SDEDIKTLPNET 216 (282)
T ss_dssp HH-------HCSSGGGCCHHHHHHHHHHHTSTTHHHHH-HHHSCSS-THHH---HH-------HHCC-CHHHHTTCCSCE
T ss_pred HH-------hhcCcccCCHHHHHHHHhhccChHHHHHH-HHHHhcc-cccc---cc-------cccc-chhhhhhcCCCE
Confidence 00 000000000000 0000 000000000 0000000 0000 00 0000 013457889999
Q ss_pred EEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhcCC
Q 012188 401 NVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSSSG 460 (468)
Q Consensus 401 Lii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~~ 460 (468)
|+|+|++|.++|++.++.+.+.+|++++++++++||+++. |+|++|++.|.+||++...
T Consensus 217 lii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~~~ 275 (282)
T 1iup_A 217 LIIHGREDQVVPLSSSLRLGELIDRAQLHVFGRCGHWTQI-EQTDRFNRLVVEFFNEANT 275 (282)
T ss_dssp EEEEETTCSSSCHHHHHHHHHHCTTEEEEEESSCCSCHHH-HSHHHHHHHHHHHHHTC--
T ss_pred EEEecCCCCCCCHHHHHHHHHhCCCCeEEEECCCCCCccc-cCHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999999997 8999999999999987543
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-31 Score=251.56 Aligned_cols=252 Identities=14% Similarity=0.173 Sum_probs=169.5
Q ss_pred CCCceeEEEecC-C--CCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 012188 168 DCDCKFCTCWSS-S--SRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEK 244 (468)
Q Consensus 168 d~~~~~~~~~~~-~--~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~ 244 (468)
++..++|..+++ + +|+|||+||++++...|..+++.|+ ++|+|+++|+||||.|+.+. ..++++++++|+ .
T Consensus 10 ~g~~l~y~~~g~~~~~~~~vvllHG~~~~~~~~~~~~~~L~----~~~~vi~~D~~G~G~S~~~~-~~~~~~~~~~dl-~ 83 (266)
T 2xua_A 10 NGTELHYRIDGERHGNAPWIVLSNSLGTDLSMWAPQVAALS----KHFRVLRYDTRGHGHSEAPK-GPYTIEQLTGDV-L 83 (266)
T ss_dssp SSSEEEEEEESCSSSCCCEEEEECCTTCCGGGGGGGHHHHH----TTSEEEEECCTTSTTSCCCS-SCCCHHHHHHHH-H
T ss_pred CCEEEEEEEcCCccCCCCeEEEecCccCCHHHHHHHHHHHh----cCeEEEEecCCCCCCCCCCC-CCCCHHHHHHHH-H
Confidence 566788888875 4 7899999999887776667888887 77999999999999998765 358999999999 6
Q ss_pred HHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHH
Q 012188 245 SVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWY 324 (468)
Q Consensus 245 ~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (468)
.++++++.++++|+||||||.+|+.+|.++|++|+++|+++++...... ............ .......
T Consensus 84 ~~l~~l~~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~~~--~~~~~~~~~~~~----------~~~~~~~ 151 (266)
T 2xua_A 84 GLMDTLKIARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSP--EVWVPRAVKART----------EGMHALA 151 (266)
T ss_dssp HHHHHTTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCSCH--HHHHHHHHHHHH----------HCHHHHH
T ss_pred HHHHhcCCCceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCCch--HHHHHHHHHHHh----------cChHHHH
Confidence 9999999999999999999999999999999999999999986543110 000000000000 0000000
Q ss_pred HHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEe
Q 012188 325 EHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFH 404 (468)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~ 404 (468)
... ....+. ..... ........+...+.. .....+......+.. ......+.++++|+++++
T Consensus 152 ~~~---~~~~~~--~~~~~------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~------~~~~~~l~~i~~P~lvi~ 213 (266)
T 2xua_A 152 DAV---LPRWFT--ADYME------REPVVLAMIRDVFVH-TDKEGYASNCEAIDA------ADLRPEAPGIKVPALVIS 213 (266)
T ss_dssp HHH---HHHHSC--HHHHH------HCHHHHHHHHHHHHT-SCHHHHHHHHHHHHH------CCCGGGGGGCCSCEEEEE
T ss_pred HHH---HHHHcC--ccccc------CCHHHHHHHHHHHhh-CCHHHHHHHHHHHhc------cCchhhhccCCCCEEEEE
Confidence 000 000000 00000 000000000000000 001111111111100 111233578899999999
Q ss_pred eCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 405 GEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 405 G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
|++|.++|++.++.+.+.+|++++++++ +||+++. |+|+++++.|.+||++
T Consensus 214 G~~D~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~-e~p~~~~~~i~~fl~~ 264 (266)
T 2xua_A 214 GTHDLAATPAQGRELAQAIAGARYVELD-ASHISNI-ERADAFTKTVVDFLTE 264 (266)
T ss_dssp ETTCSSSCHHHHHHHHHHSTTCEEEEES-CCSSHHH-HTHHHHHHHHHHHHTC
T ss_pred cCCCCcCCHHHHHHHHHhCCCCEEEEec-CCCCchh-cCHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999 9999997 8999999999999965
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-31 Score=252.00 Aligned_cols=260 Identities=15% Similarity=0.131 Sum_probs=168.3
Q ss_pred CCCceeEEEecC-CCCeEEEEecCCCCcc-chhhhhhhccccCCCcceEEEECCCCCCCCCC-CCCC-CCCHHHHHHHHH
Q 012188 168 DCDCKFCTCWSS-SSRDTLFVKTQGPSAF-WTETLFPNFSSASKSTYRLFAIDLLGFGRSPK-PTDS-LYTVREHLDMIE 243 (468)
Q Consensus 168 d~~~~~~~~~~~-~~p~vl~lHG~g~s~~-~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~-~~~~-~~t~~~~~~di~ 243 (468)
++..++|..+++ ++|+|||+||++++.. .|..+++.|+ ++|+|+++|+||||.|+. +... .++++++++|+
T Consensus 11 ~g~~l~~~~~G~~~~~~vvllHG~~~~~~~~w~~~~~~L~----~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~a~dl- 85 (286)
T 2yys_A 11 GEAELYVEDVGPVEGPALFVLHGGPGGNAYVLREGLQDYL----EGFRVVYFDQRGSGRSLELPQDPRLFTVDALVEDT- 85 (286)
T ss_dssp SSCEEEEEEESCTTSCEEEEECCTTTCCSHHHHHHHGGGC----TTSEEEEECCTTSTTSCCCCSCGGGCCHHHHHHHH-
T ss_pred CCEEEEEEeecCCCCCEEEEECCCCCcchhHHHHHHHHhc----CCCEEEEECCCCCCCCCCCccCcccCcHHHHHHHH-
Confidence 566788888875 6789999999998877 5666888887 799999999999999987 5431 58999999999
Q ss_pred HHHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHH
Q 012188 244 KSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACW 323 (468)
Q Consensus 244 ~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (468)
.++++.++.++++|+||||||.+|+.+|.++|+ |+++|++++.... . .......... ..++.......+...
T Consensus 86 ~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~~~---~-~~~~~~~~~~---~~~~~~~~~~~~~~~ 157 (286)
T 2yys_A 86 LLLAEALGVERFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPWVNF---P-WLAARLAEAA---GLAPLPDPEENLKEA 157 (286)
T ss_dssp HHHHHHTTCCSEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCCCBH---H-HHHHHHHHHT---TCCCCSCHHHHHHHH
T ss_pred HHHHHHhCCCcEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCccCc---H-HHHHHHHHHh---ccccchhHHHHHHHH
Confidence 699999999999999999999999999999999 9999999986410 0 0000110000 000000000000000
Q ss_pred HHH--HhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEE
Q 012188 324 YEH--ISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVN 401 (468)
Q Consensus 324 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvL 401 (468)
... ......... .... . ........... .... ........+ ..... ........+.++++|+|
T Consensus 158 ~~~~~~~~~~~~~~-~~~~--~---~~~~~~~~~~~-~~~~---~~~~~~~~~--~~~~~---~~~~~~~~l~~i~~P~l 222 (286)
T 2yys_A 158 LKREEPKALFDRLM-FPTP--R---GRMAYEWLAEG-AGIL---GSDAPGLAF--LRNGL---WRLDYTPYLTPERRPLY 222 (286)
T ss_dssp HHHSCHHHHHHHHH-CSSH--H---HHHHHHHHHHH-TTCC---CCSHHHHHH--HHTTG---GGCBCGGGCCCCSSCEE
T ss_pred hccCChHHHHHhhh-ccCC--c---cccChHHHHHH-Hhhc---cccccchhh--ccccc---ccCChhhhhhhcCCCEE
Confidence 000 000000000 0000 0 00000001110 0000 000000000 01000 01112334578899999
Q ss_pred EEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 402 VFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 402 ii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
+|+|++|.++|.+ ++.+.+ +|++++++++++||+++. |+|+++++.|.+||++.
T Consensus 223 vi~G~~D~~~~~~-~~~~~~-~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~ 276 (286)
T 2yys_A 223 VLVGERDGTSYPY-AEEVAS-RLRAPIRVLPEAGHYLWI-DAPEAFEEAFKEALAAL 276 (286)
T ss_dssp EEEETTCTTTTTT-HHHHHH-HHTCCEEEETTCCSSHHH-HCHHHHHHHHHHHHHTT
T ss_pred EEEeCCCCcCCHh-HHHHHh-CCCCCEEEeCCCCCCcCh-hhHHHHHHHHHHHHHhh
Confidence 9999999999999 999999 999999999999999998 89999999999999764
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-31 Score=253.72 Aligned_cols=257 Identities=15% Similarity=0.125 Sum_probs=166.8
Q ss_pred CCCceeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHh
Q 012188 168 DCDCKFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVI 247 (468)
Q Consensus 168 d~~~~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~ 247 (468)
++..++|..|+ ++++|||+||++++...|..+++.|+ ++||+|+++|+||||.|+.+. ..++++++++|+ ..++
T Consensus 11 ~g~~l~y~~~g-~g~pvvllHG~~~~~~~~~~~~~~L~---~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~a~dl-~~~l 84 (277)
T 1brt_A 11 TSIDLYYEDHG-TGQPVVLIHGFPLSGHSWERQSAALL---DAGYRVITYDRRGFGQSSQPT-TGYDYDTFAADL-NTVL 84 (277)
T ss_dssp EEEEEEEEEEC-SSSEEEEECCTTCCGGGGHHHHHHHH---HTTCEEEEECCTTSTTSCCCS-SCCSHHHHHHHH-HHHH
T ss_pred CCcEEEEEEcC-CCCeEEEECCCCCcHHHHHHHHHHHh---hCCCEEEEeCCCCCCCCCCCC-CCccHHHHHHHH-HHHH
Confidence 45567788876 56789999999988776667888886 368999999999999998765 468999999999 6999
Q ss_pred cccCCceEEEEEEcccHHHHHHHHHhCCC-ccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHH--
Q 012188 248 EPNKVKSFHIVAHSLGCILALALAVKHPG-SVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWY-- 324 (468)
Q Consensus 248 ~~l~~~~i~lvGhS~Gg~ial~~a~~~p~-~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 324 (468)
++++.++++|+||||||.+++.+|.++|+ +|+++|++++.......... .+....+...+........
T Consensus 85 ~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~ 155 (277)
T 1brt_A 85 ETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDD---------NPDGAAPQEFFDGIVAAVKAD 155 (277)
T ss_dssp HHHTCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTT---------BTTCSBCHHHHHHHHHHHHHC
T ss_pred HHhCCCceEEEEECccHHHHHHHHHHcCcceEEEEEEecCcCcccccccc---------CccccccHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999 99999999974321100000 0000000000000000000
Q ss_pred --HHHhhHHHHHhhc----cchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCC
Q 012188 325 --EHISRTICLLICK----NHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKC 398 (468)
Q Consensus 325 --~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 398 (468)
..........+.. .....+ .....+... ..... ........... .......+.++++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~-~~~~~----~~~~~~~~~~~----~~~~~~~l~~i~~ 218 (277)
T 1brt_A 156 RYAFYTGFFNDFYNLDENLGTRISE--------EAVRNSWNT-AASGG----FFAAAAAPTTW----YTDFRADIPRIDV 218 (277)
T ss_dssp HHHHHHHHHHHHTTHHHHBTTTBCH--------HHHHHHHHH-HHHSC----HHHHHHGGGGT----TCCCTTTGGGCCS
T ss_pred chhhHHHHHHHHhhccccccccCCH--------HHHHHHHHH-Hhccc----hHHHHHHHHHH----hccchhhcccCCC
Confidence 0000000000000 000000 000000000 00000 00000000000 1112234578899
Q ss_pred cEEEEeeCCCCccChhhH-HHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 399 DVNVFHGEDDELIPVECS-YNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 399 PvLii~G~~D~~vp~~~~-~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
|+|+|+|++|.++|++.+ +.+.+.+|++++++++++||+++. ++|+++++.|.+||++
T Consensus 219 P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 277 (277)
T 1brt_A 219 PALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLW-THAEEVNTALLAFLAK 277 (277)
T ss_dssp CEEEEEETTCSSSCGGGTHHHHHHHCTTSEEEEETTCCTTHHH-HTHHHHHHHHHHHHHC
T ss_pred CeEEEecCCCccCChHHHHHHHHHHCCCCcEEEeCCCCcchhh-hCHHHHHHHHHHHHhC
Confidence 999999999999999988 999999999999999999999997 8999999999999963
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-32 Score=251.16 Aligned_cols=247 Identities=11% Similarity=0.114 Sum_probs=162.0
Q ss_pred eeEEEecC----CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHh
Q 012188 172 KFCTCWSS----SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVI 247 (468)
Q Consensus 172 ~~~~~~~~----~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~ 247 (468)
++|..+++ ++|+|||+||++++...|..+++.|+ +.|+|+++|+||||.|+.+. .++++++++|+ ..++
T Consensus 3 l~y~~~G~~~~~~~~~vvllHG~~~~~~~w~~~~~~L~----~~~~via~Dl~G~G~S~~~~--~~~~~~~a~dl-~~~l 75 (255)
T 3bf7_A 3 LNIRAQTAQNQHNNSPIVLVHGLFGSLDNLGVLARDLV----NDHNIIQVDVRNHGLSPREP--VMNYPAMAQDL-VDTL 75 (255)
T ss_dssp CCEEEECCSSCCCCCCEEEECCTTCCTTTTHHHHHHHT----TTSCEEEECCTTSTTSCCCS--CCCHHHHHHHH-HHHH
T ss_pred eeeeecCccccCCCCCEEEEcCCcccHhHHHHHHHHHH----hhCcEEEecCCCCCCCCCCC--CcCHHHHHHHH-HHHH
Confidence 56677764 67899999999887765666888887 67999999999999998764 47999999999 6999
Q ss_pred cccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCC-chhhHHHHHhhcCCCCCchhhhhhhhHHHHHH
Q 012188 248 EPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKG-AQASQYVMRKVAPRRVWPLIAFGASMACWYEH 326 (468)
Q Consensus 248 ~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (468)
+.++.++++|+||||||.+|+.+|.++|++|+++|++++........ .......+....... ... ...
T Consensus 76 ~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~------~~~---- 144 (255)
T 3bf7_A 76 DALQIDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESD-AQT------RQQ---- 144 (255)
T ss_dssp HHHTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCCSCCCHHHHHHHHHHHHSC-CCS------HHH----
T ss_pred HHcCCCCeeEEeeCccHHHHHHHHHhCcHhhccEEEEcCCcccCCcccHHHHHHHHHhccccc-ccc------HHH----
Confidence 99999999999999999999999999999999999997532221111 000000000000000 000 000
Q ss_pred HhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeC
Q 012188 327 ISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGE 406 (468)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~ 406 (468)
... .............++...+...........+...+.... .. ..+.++++|+|+|+|+
T Consensus 145 ~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~l~~i~~P~l~i~G~ 204 (255)
T 3bf7_A 145 AAA--------------IMRQHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIV-GW-----EKIPAWDHPALFIPGG 204 (255)
T ss_dssp HHH--------------HHTTTCCCHHHHHHHHTTEETTEESSCHHHHHHTHHHHH-CC-----CCCCCCCSCEEEECBT
T ss_pred HHH--------------HHhhhcchhHHHHHHHHhccCCceeecHHHHHhhhhhcc-cc-----ccccccCCCeEEEECC
Confidence 000 000000000111111111100000000000000000000 00 1135789999999999
Q ss_pred CCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 407 DDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 407 ~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
+|.++|++.++.+.+.+|++++++++++||+++. |+|+++++.|.+|+++
T Consensus 205 ~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 254 (255)
T 3bf7_A 205 NSPYVSEQYRDDLLAQFPQARAHVIAGAGHWVHA-EKPDAVLRAIRRYLND 254 (255)
T ss_dssp TCSTTCGGGHHHHHHHCTTEEECCBTTCCSCHHH-HCHHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHCCCCeEEEeCCCCCcccc-CCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999997 8999999999999974
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-32 Score=261.99 Aligned_cols=266 Identities=17% Similarity=0.159 Sum_probs=170.5
Q ss_pred CCCceeEEEecCCCC--eEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 012188 168 DCDCKFCTCWSSSSR--DTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKS 245 (468)
Q Consensus 168 d~~~~~~~~~~~~~p--~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~ 245 (468)
++..++|..+++ +| +|||+||++++...|..+++.|+ ++|+|+++|+||||.|+.+. ..|+++++++|+ ..
T Consensus 15 ~g~~l~y~~~G~-g~~~pvvllHG~~~~~~~w~~~~~~L~----~~~~via~Dl~G~G~S~~~~-~~~~~~~~a~dl-~~ 87 (316)
T 3afi_E 15 LGSSMAYRETGA-QDAPVVLFLHGNPTSSHIWRNILPLVS----PVAHCIAPDLIGFGQSGKPD-IAYRFFDHVRYL-DA 87 (316)
T ss_dssp TTEEEEEEEESC-TTSCEEEEECCTTCCGGGGTTTHHHHT----TTSEEEEECCTTSTTSCCCS-SCCCHHHHHHHH-HH
T ss_pred CCEEEEEEEeCC-CCCCeEEEECCCCCchHHHHHHHHHHh----hCCEEEEECCCCCCCCCCCC-CCCCHHHHHHHH-HH
Confidence 455677877764 45 99999999988876667888887 77999999999999998754 468999999999 69
Q ss_pred HhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCc-h------------hhHHHHHhhcCCCCCc
Q 012188 246 VIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGA-Q------------ASQYVMRKVAPRRVWP 312 (468)
Q Consensus 246 l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~-~------------~~~~~~~~~~~~~~~~ 312 (468)
+++++++++++|+||||||.+|+.+|.++|++|+++|++++......... . ........... +
T Consensus 88 ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 163 (316)
T 3afi_E 88 FIEQRGVTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFHHTEVAEEQDHAEAARAVFRKFRT----P 163 (316)
T ss_dssp HHHHTTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEECCCBSSGGGTTCCCCGGGHHHHHHHHHHHHHHTS----T
T ss_pred HHHHcCCCCEEEEEeCccHHHHHHHHHHCHHhhhheeeeccCCCcchhhhccchhhccccccchhHHHHHHHhcC----C
Confidence 99999999999999999999999999999999999999997331100000 0 00011111100 0
Q ss_pred hhhhhhhhHHHHHHHhhHHHHHhh--ccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccc-------
Q 012188 313 LIAFGASMACWYEHISRTICLLIC--KNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTAN------- 383 (468)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 383 (468)
... . ............... ......+ .....+. ..+... ...............
T Consensus 164 ~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 226 (316)
T 3afi_E 164 GEG--E---AMILEANAFVERVLPGGIVRKLGD--------EEMAPYR-TPFPTP---ESRRPVLAFPRELPIAGEPADV 226 (316)
T ss_dssp THH--H---HHHTTSCHHHHTTTGGGCSSCCCH--------HHHHHHH-TTCCST---GGGHHHHHTGGGSCBTTBSHHH
T ss_pred chh--h---HHHhccchHHHHhcccccCCCCCH--------HHHHHHH-hhcCCc---cchhHHHHHHHhccccccchhh
Confidence 000 0 000000000000000 0000000 0000000 000000 000000000000000
Q ss_pred -cccchHHHhhccCCCcEEEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhcCCCC
Q 012188 384 -KLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSSSGHE 462 (468)
Q Consensus 384 -~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~~~~ 462 (468)
.........+.++++|+|+|+|++|.++|++.++.+.+.+|++++++++++||+++. |+|++|++.|.+||++.....
T Consensus 227 ~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~GH~~~~-e~p~~~~~~i~~fl~~~~~~~ 305 (316)
T 3afi_E 227 YEALQSAHAALAASSYPKLLFTGEPGALVSPEFAERFAASLTRCALIRLGAGLHYLQE-DHADAIGRSVAGWIAGIEAVR 305 (316)
T ss_dssp HHHHHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHSSSEEEEEEEEECSCHHH-HHHHHHHHHHHHHHHHHHHTS
T ss_pred hhHHHHHHHhhhccCCCeEEEecCCCCccCHHHHHHHHHhCCCCeEEEcCCCCCCchh-hCHHHHHHHHHHHHhhcCCCC
Confidence 000112334567899999999999999999999999999999999999999999997 899999999999998754433
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 | Back alignment and structure |
|---|
Probab=99.98 E-value=3.4e-31 Score=252.63 Aligned_cols=263 Identities=13% Similarity=0.114 Sum_probs=164.9
Q ss_pred CCCceeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCC----CCCHHHHHHHHH
Q 012188 168 DCDCKFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDS----LYTVREHLDMIE 243 (468)
Q Consensus 168 d~~~~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~----~~t~~~~~~di~ 243 (468)
++..++|..++ ++|+|||+||++++...|..+++.|+ +.|+|+++|+||||.|+.+ .. .|+++++++|+
T Consensus 17 ~g~~l~y~~~G-~g~~lvllHG~~~~~~~w~~~~~~L~----~~~~via~Dl~G~G~S~~~-~~~~~~~~~~~~~a~dl- 89 (294)
T 1ehy_A 17 PDVKIHYVREG-AGPTLLLLHGWPGFWWEWSKVIGPLA----EHYDVIVPDLRGFGDSEKP-DLNDLSKYSLDKAADDQ- 89 (294)
T ss_dssp SSCEEEEEEEE-CSSEEEEECCSSCCGGGGHHHHHHHH----TTSEEEEECCTTSTTSCCC-CTTCGGGGCHHHHHHHH-
T ss_pred CCEEEEEEEcC-CCCEEEEECCCCcchhhHHHHHHHHh----hcCEEEecCCCCCCCCCCC-ccccccCcCHHHHHHHH-
Confidence 56678888876 67899999999987776667889888 6799999999999999886 31 58999999999
Q ss_pred HHHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHH
Q 012188 244 KSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACW 323 (468)
Q Consensus 244 ~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (468)
..+++++++++++|+||||||.+|+.+|.++|++|+++|+++++........ ... . .....|............
T Consensus 90 ~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~--~~~--~--~~~~~~~~~~~~~~~~~~ 163 (294)
T 1ehy_A 90 AALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVY--FGL--G--HVHESWYSQFHQLDMAVE 163 (294)
T ss_dssp HHHHHHTTCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-----------------CCHHHHHTTCHHHHH
T ss_pred HHHHHHcCCCCEEEEEeChhHHHHHHHHHhChhheeEEEEecCCCCCcchhh--ccc--h--hccCceEEEecCcchhHH
Confidence 6999999999999999999999999999999999999999997532211100 000 0 000000000000000000
Q ss_pred ---------HHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccc-hhHHhhHhHHHhcccccccchHHHhh
Q 012188 324 ---------YEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTH-NAAWHTLHNIICGTANKLDGYLDAVR 393 (468)
Q Consensus 324 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (468)
...................+. ....+. ..+..... .......... ............+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l 231 (294)
T 1ehy_A 164 VVGSSREVCKKYFKHFFDHWSYRDELLTEE--------ELEVHV-DNCMKPDNIHGGFNYYRAN---IRPDAALWTDLDH 231 (294)
T ss_dssp HHTSCHHHHHHHHHHHHHHTSSSSCCSCHH--------HHHHHH-HHHTSTTHHHHHHHHHHHH---SSSSCCCCCTGGG
T ss_pred HhccchhHHHHHHHHHhhcccCCCCCCCHH--------HHHHHH-HHhcCCcccchHHHHHHHH---HhhhhhhcCCccc
Confidence 000000000000000000000 000000 00000000 0000001111 0000000001123
Q ss_pred ccCCCcEEEEeeCCCCccCh-hhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHh
Q 012188 394 NHVKCDVNVFHGEDDELIPV-ECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWR 456 (468)
Q Consensus 394 ~~i~~PvLii~G~~D~~vp~-~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~ 456 (468)
.++++|+|+|+|++|.++|. +..+.+.+.+|++++++++++||+++. |+|++|++.|.+||+
T Consensus 232 ~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~ 294 (294)
T 1ehy_A 232 TMSDLPVTMIWGLGDTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMV-EKPEIAIDRIKTAFR 294 (294)
T ss_dssp SCBCSCEEEEEECCSSCCTTHHHHHHHHHHBSSEEEEEETTCCSCHHH-HCHHHHHHHHHHHCC
T ss_pred CcCCCCEEEEEeCCCCCcchHHHHHHHHHHcCCCceEEeCCCCCChhh-hCHHHHHHHHHHHhC
Confidence 57899999999999999984 677888888999999999999999997 999999999999973
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A | Back alignment and structure |
|---|
Probab=99.98 E-value=3.2e-31 Score=251.85 Aligned_cols=254 Identities=15% Similarity=0.164 Sum_probs=166.3
Q ss_pred CceeEEEecCCCCeEEEEecCC---CCccchhhhh-hhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 012188 170 DCKFCTCWSSSSRDTLFVKTQG---PSAFWTETLF-PNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKS 245 (468)
Q Consensus 170 ~~~~~~~~~~~~p~vl~lHG~g---~s~~~~~~~~-~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~ 245 (468)
..++|..++ ++|+|||+||++ ++...|..++ +.|+ ++|+|+++|+||||.|+.+....++++++++++ ..
T Consensus 23 ~~l~y~~~G-~g~~vvllHG~~~~~~~~~~w~~~~~~~L~----~~~~vi~~D~~G~G~S~~~~~~~~~~~~~a~dl-~~ 96 (286)
T 2puj_A 23 FNIHYNEAG-NGETVIMLHGGGPGAGGWSNYYRNVGPFVD----AGYRVILKDSPGFNKSDAVVMDEQRGLVNARAV-KG 96 (286)
T ss_dssp EEEEEEEEC-CSSEEEEECCCSTTCCHHHHHTTTHHHHHH----TTCEEEEECCTTSTTSCCCCCSSCHHHHHHHHH-HH
T ss_pred EEEEEEecC-CCCcEEEECCCCCCCCcHHHHHHHHHHHHh----ccCEEEEECCCCCCCCCCCCCcCcCHHHHHHHH-HH
Confidence 457777766 468999999986 5444444567 8787 679999999999999987764468999999999 69
Q ss_pred HhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCc----hhhHHHHHhhcCCCCCchhhhhhhhH
Q 012188 246 VIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGA----QASQYVMRKVAPRRVWPLIAFGASMA 321 (468)
Q Consensus 246 l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (468)
+++++++++++|+||||||.+|+.+|.++|++|+++|++++......... ............ +.. ....
T Consensus 97 ~l~~l~~~~~~lvGhS~GG~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~ 169 (286)
T 2puj_A 97 LMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAE----PSY---ETLK 169 (286)
T ss_dssp HHHHTTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHS----CCH---HHHH
T ss_pred HHHHhCCCceEEEEECHHHHHHHHHHHhChHhhheEEEECccccCCCcccccchhhHHHHHHHhhC----CcH---HHHH
Confidence 99999999999999999999999999999999999999998654221100 001111111000 000 0000
Q ss_pred HHHHHHhhHHHHHhhccchhH-HHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcE
Q 012188 322 CWYEHISRTICLLICKNHRVW-EFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDV 400 (468)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pv 400 (468)
.............. +....... ... . .......+...+..... ........+.++++|+
T Consensus 170 -------~~~~~~~~~~~~~~~~~~~~~~~-----~~~-----~--~~~~~~~~~~~~~~~~~-~~~~~~~~l~~i~~P~ 229 (286)
T 2puj_A 170 -------QMLQVFLYDQSLITEELLQGRWE-----AIQ-----R--QPEHLKNFLISAQKAPL-STWDVTARLGEIKAKT 229 (286)
T ss_dssp -------HHHHHHCSCGGGCCHHHHHHHHH-----HHH-----H--CHHHHHHHHHHHHHSCG-GGGCCGGGGGGCCSCE
T ss_pred -------HHHHHHhcCCccCCHHHHHHHHH-----Hhh-----c--CHHHHHHHHHHHhhhhc-cccchhhHHhhcCCCE
Confidence 00000000000000 00000000 000 0 00000000000000000 0011223457889999
Q ss_pred EEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 401 NVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 401 Lii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
|+|+|++|.++|++.++.+.+.+|++++++++++||+++. |+|+++++.|.+||++
T Consensus 230 Lii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 285 (286)
T 2puj_A 230 FITWGRDDRFVPLDHGLKLLWNIDDARLHVFSKCGAWAQW-EHADEFNRLVIDFLRH 285 (286)
T ss_dssp EEEEETTCSSSCTHHHHHHHHHSSSEEEEEESSCCSCHHH-HTHHHHHHHHHHHHHH
T ss_pred EEEEECCCCccCHHHHHHHHHHCCCCeEEEeCCCCCCccc-cCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999997 8999999999999975
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=99.98 E-value=6.5e-31 Score=249.22 Aligned_cols=258 Identities=18% Similarity=0.259 Sum_probs=167.4
Q ss_pred CCCceeEEEecCCCCe-EEEEecCC---CCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHH----H
Q 012188 168 DCDCKFCTCWSSSSRD-TLFVKTQG---PSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREH----L 239 (468)
Q Consensus 168 d~~~~~~~~~~~~~p~-vl~lHG~g---~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~----~ 239 (468)
++..++|..+++++++ |||+||++ ++...|..+++.|+ ++|+|+++|+||||.|+.+....++++++ +
T Consensus 15 ~g~~l~y~~~g~~g~p~vvllHG~~~~~~~~~~~~~~~~~L~----~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~ 90 (285)
T 1c4x_A 15 GTLASHALVAGDPQSPAVVLLHGAGPGAHAASNWRPIIPDLA----ENFFVVAPDLIGFGQSEYPETYPGHIMSWVGMRV 90 (285)
T ss_dssp TTSCEEEEEESCTTSCEEEEECCCSTTCCHHHHHGGGHHHHH----TTSEEEEECCTTSTTSCCCSSCCSSHHHHHHHHH
T ss_pred CCEEEEEEecCCCCCCEEEEEeCCCCCCcchhhHHHHHHHHh----hCcEEEEecCCCCCCCCCCCCcccchhhhhhhHH
Confidence 4566888888744555 99999986 44444445777777 67999999999999998766446899999 9
Q ss_pred HHHHHHHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhh
Q 012188 240 DMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGAS 319 (468)
Q Consensus 240 ~di~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (468)
+++ ..++++++.++++|+||||||.+|+.+|.++|++|+++|++++..................... +..
T Consensus 91 ~dl-~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~----~~~----- 160 (285)
T 1c4x_A 91 EQI-LGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELARLLAFYAD----PRL----- 160 (285)
T ss_dssp HHH-HHHHHHHTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHHHHHHTGGGS----CCH-----
T ss_pred HHH-HHHHHHhCCCccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCCCCCccchhHHHHHHHhcc----ccH-----
Confidence 999 6999999999999999999999999999999999999999998654322111111111111000 000
Q ss_pred hHHHHHHHhhHHHHHhhccchh--HHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHH--hcccccccchHHHhhcc
Q 012188 320 MACWYEHISRTICLLICKNHRV--WEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNII--CGTANKLDGYLDAVRNH 395 (468)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 395 (468)
................. .+..... ...... .......+.... ..............+.+
T Consensus 161 -----~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 223 (285)
T 1c4x_A 161 -----TPYRELIHSFVYDPENFPGMEEIVKS----RFEVAN--------DPEVRRIQEVMFESMKAGMESLVIPPATLGR 223 (285)
T ss_dssp -----HHHHHHHHTTSSCSTTCTTHHHHHHH----HHHHHH--------CHHHHHHHHHHHHHHSSCCGGGCCCHHHHTT
T ss_pred -----HHHHHHHHHhhcCcccccCcHHHHHH----HHHhcc--------CHHHHHHHHHHhccccccccccccchhhhcc
Confidence 00000000000000000 0000000 000000 000000000000 00000000112234578
Q ss_pred CCCcEEEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 396 VKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 396 i~~PvLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
+++|+|+|+|++|.++|++.++.+.+.+|++++++++++||+++. |+|+++++.|.+||++
T Consensus 224 i~~P~lii~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 284 (285)
T 1c4x_A 224 LPHDVLVFHGRQDRIVPLDTSLYLTKHLKHAELVVLDRCGHWAQL-ERWDAMGPMLMEHFRA 284 (285)
T ss_dssp CCSCEEEEEETTCSSSCTHHHHHHHHHCSSEEEEEESSCCSCHHH-HSHHHHHHHHHHHHHC
T ss_pred CCCCEEEEEeCCCeeeCHHHHHHHHHhCCCceEEEeCCCCcchhh-cCHHHHHHHHHHHHhc
Confidence 899999999999999999999999999999999999999999997 8999999999999974
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A | Back alignment and structure |
|---|
Probab=99.98 E-value=1e-31 Score=258.39 Aligned_cols=256 Identities=16% Similarity=0.182 Sum_probs=167.3
Q ss_pred CceeEEEecC-C-CCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCC-CCCCHHHHHHHHHHHH
Q 012188 170 DCKFCTCWSS-S-SRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD-SLYTVREHLDMIEKSV 246 (468)
Q Consensus 170 ~~~~~~~~~~-~-~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~-~~~t~~~~~~di~~~l 246 (468)
..++|..+++ + +|+|||+||++++...|..+++.|+ ++||+||++|+||||.|+.+.. ..|+++++++|+ ..+
T Consensus 34 ~~l~y~~~G~~~~g~~vvllHG~~~~~~~w~~~~~~L~---~~g~rvia~Dl~G~G~S~~~~~~~~y~~~~~a~dl-~~l 109 (310)
T 1b6g_A 34 LRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFA---ESGARVIAPDFFGFGKSDKPVDEEDYTFEFHRNFL-LAL 109 (310)
T ss_dssp CEEEEEEEECTTCSCEEEECCCTTCCGGGGTTTHHHHH---HTTCEEEEECCTTSTTSCEESCGGGCCHHHHHHHH-HHH
T ss_pred eEEEEEEeCCCCCCCEEEEECCCCCchhhHHHHHHHHH---hCCCeEEEeCCCCCCCCCCCCCcCCcCHHHHHHHH-HHH
Confidence 6688888874 4 7899999999988877777888887 3569999999999999987653 468999999999 699
Q ss_pred hcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCC-----------chhhHHHHHhhcCCCCCchhh
Q 012188 247 IEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKG-----------AQASQYVMRKVAPRRVWPLIA 315 (468)
Q Consensus 247 ~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~ 315 (468)
++++++++++|+||||||.+|+.+|.++|++|+++|++++.....+.. ...................
T Consensus 110 l~~l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 187 (310)
T 1b6g_A 110 IERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTDPVTQPAFSAFVTQPADGFTAWKYDLVTPSDLRL-- 187 (310)
T ss_dssp HHHHTCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHHHTTTSSTTTHHHHHHHHHSCSSCCH--
T ss_pred HHHcCCCCEEEEEcChHHHHHHHHHHhChHhheEEEEeccccccCCccccchhhhhhccchHHHHHHHHhccCchhhh--
Confidence 999999999999999999999999999999999999999854311110 0000000000000000000
Q ss_pred hhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccc---cccchHHHh
Q 012188 316 FGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTAN---KLDGYLDAV 392 (468)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 392 (468)
.... .. .. ....+... ..+ ...+...........+......... .........
T Consensus 188 -~~~~-----------~~--~~-~~~~~~~~--------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (310)
T 1b6g_A 188 -DQFM-----------KR--WA-PTLTEAEA--------SAY-AAPFPDTSYQAGVRKFPKMVAQRDQAXIDISTEAISF 243 (310)
T ss_dssp -HHHH-----------HH--HS-TTCCHHHH--------HHH-HTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHHH
T ss_pred -hhHH-----------hh--cC-CCCCHHHH--------HHH-hcccCCccchHHHHHHHHHhcccccchhhhhhhHhhh
Confidence 0000 00 00 00000000 000 0000000000000000000000000 000112334
Q ss_pred hc-cCCCcEEEEeeCCCCccChhhHHHHHHhCCCCeEEEe--cCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 393 RN-HVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVI--EKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 393 ~~-~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i--~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
+. ++++|+|+|+|++|.++| +.++.+.+.+|+++++++ +++||+++ . +|++|++.|.+||++.
T Consensus 244 l~~~i~~P~Lvi~G~~D~~~~-~~~~~~~~~ip~~~~~~i~~~~~GH~~~-~-~p~~~~~~i~~Fl~~~ 309 (310)
T 1b6g_A 244 WQNDWNGQTFMAIGMKDKLLG-PDVMYPMKALINGCPEPLEIADAGHFVQ-E-FGEQVAREALKHFAET 309 (310)
T ss_dssp HHHTCCSEEEEEEETTCSSSS-HHHHHHHHHHSTTCCCCEEETTCCSCGG-G-GHHHHHHHHHHHHHHT
T ss_pred hhccccCceEEEeccCcchhh-hHHHHHHHhcccccceeeecCCcccchh-h-ChHHHHHHHHHHHhcc
Confidence 56 899999999999999999 888999999999998888 99999998 4 9999999999999753
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A | Back alignment and structure |
|---|
Probab=99.98 E-value=4.4e-31 Score=248.17 Aligned_cols=258 Identities=21% Similarity=0.202 Sum_probs=162.7
Q ss_pred CCCCceeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 012188 167 SDCDCKFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSV 246 (468)
Q Consensus 167 ~d~~~~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l 246 (468)
.||..++|..++ ++++|||+||++++...|..+++.|. ++||+|+++|+||||.|+.+.. .++++++++|+ ..+
T Consensus 6 ~~g~~l~y~~~G-~g~~vvllHG~~~~~~~w~~~~~~l~---~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~a~d~-~~~ 79 (271)
T 3ia2_A 6 KDGTQIYFKDWG-SGKPVLFSHGWLLDADMWEYQMEYLS---SRGYRTIAFDRRGFGRSDQPWT-GNDYDTFADDI-AQL 79 (271)
T ss_dssp TTSCEEEEEEES-SSSEEEEECCTTCCGGGGHHHHHHHH---TTTCEEEEECCTTSTTSCCCSS-CCSHHHHHHHH-HHH
T ss_pred CCCCEEEEEccC-CCCeEEEECCCCCcHHHHHHHHHHHH---hCCceEEEecCCCCccCCCCCC-CCCHHHHHHHH-HHH
Confidence 477788888887 56889999999887776666777776 4799999999999999987653 57999999999 699
Q ss_pred hcccCCceEEEEEEcccHHHHHHHHHh-CCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHH
Q 012188 247 IEPNKVKSFHIVAHSLGCILALALAVK-HPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYE 325 (468)
Q Consensus 247 ~~~l~~~~i~lvGhS~Gg~ial~~a~~-~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (468)
++.++.++++|+||||||.+++.++++ +|++|+++|++++........... + ...+...+.........
T Consensus 80 l~~l~~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~---------~-~~~~~~~~~~~~~~~~~ 149 (271)
T 3ia2_A 80 IEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDY---------P-QGVPLDVFARFKTELLK 149 (271)
T ss_dssp HHHHTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTB---------T-TSBCHHHHHHHHHHHHH
T ss_pred HHHhCCCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccCCccccCCCCC---------c-ccccHHHHHHHHHHHHh
Confidence 999999999999999999866666555 599999999998653221100000 0 00000000000000000
Q ss_pred H----HhhHHHHHhhcc--chhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCc
Q 012188 326 H----ISRTICLLICKN--HRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCD 399 (468)
Q Consensus 326 ~----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 399 (468)
. ............ ....+.... ........ ............. ........+.++++|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~-~~~~~~~~~~~~~-------~~~~~~~~l~~i~~P 213 (271)
T 3ia2_A 150 DRAQFISDFNAPFYGINKGQVVSQGVQT--------QTLQIALL-ASLKATVDCVTAF-------AETDFRPDMAKIDVP 213 (271)
T ss_dssp HHHHHHHHHHHHHHTGGGTCCCCHHHHH--------HHHHHHHH-SCHHHHHHHHHHH-------HHCBCHHHHTTCCSC
T ss_pred hHHHHHHHhhHhhhccccccccCHHHHH--------HHHhhhhh-ccHHHHHHHHHHh-------hccCCcccccCCCCC
Confidence 0 000000000000 000000000 00000000 0000000000000 011223345789999
Q ss_pred EEEEeeCCCCccChhh-HHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 400 VNVFHGEDDELIPVEC-SYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 400 vLii~G~~D~~vp~~~-~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
+|+|+|++|.++|++. .+.+.+.+|++++++++++||+++. ++|+++++.|.+||++
T Consensus 214 ~Lvi~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~Fl~~ 271 (271)
T 3ia2_A 214 TLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAV-THAQQLNEDLLAFLKR 271 (271)
T ss_dssp EEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTHHH-HTHHHHHHHHHHHHTC
T ss_pred EEEEEeCCCCcCChHHHHHHHHHhCCCceEEEEcCCCCcccc-cCHHHHHHHHHHHhhC
Confidence 9999999999999987 5566777899999999999999997 9999999999999963
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=99.98 E-value=4.8e-31 Score=251.90 Aligned_cols=261 Identities=19% Similarity=0.245 Sum_probs=165.2
Q ss_pred CCCceeEEEecCCCCeEEEEecCC---CCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 012188 168 DCDCKFCTCWSSSSRDTLFVKTQG---PSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEK 244 (468)
Q Consensus 168 d~~~~~~~~~~~~~p~vl~lHG~g---~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~ 244 (468)
++..++|..++ ++|+|||+||++ .+...|..+++.|+ ++|+|+++|+||||.|+ +....++++++++++ .
T Consensus 24 ~g~~l~y~~~g-~g~~vvllHG~~~~~~~~~~~~~~~~~L~----~~~~vi~~Dl~G~G~S~-~~~~~~~~~~~~~dl-~ 96 (296)
T 1j1i_A 24 GGVETRYLEAG-KGQPVILIHGGGAGAESEGNWRNVIPILA----RHYRVIAMDMLGFGKTA-KPDIEYTQDRRIRHL-H 96 (296)
T ss_dssp TTEEEEEEEEC-CSSEEEEECCCSTTCCHHHHHTTTHHHHT----TTSEEEEECCTTSTTSC-CCSSCCCHHHHHHHH-H
T ss_pred CCEEEEEEecC-CCCeEEEECCCCCCcchHHHHHHHHHHHh----hcCEEEEECCCCCCCCC-CCCCCCCHHHHHHHH-H
Confidence 45567777766 468999999986 44444445777776 67999999999999998 554468999999999 6
Q ss_pred HHhcccCC-ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHH
Q 012188 245 SVIEPNKV-KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACW 323 (468)
Q Consensus 245 ~l~~~l~~-~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (468)
.+++.++. ++++|+||||||.+|+.+|.++|++|+++|+++++....... .. ....... .+.. ....
T Consensus 97 ~~l~~l~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~----~~-~~~~~~~--~~~~---~~~~-- 164 (296)
T 1j1i_A 97 DFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIH----ED-LRPIINY--DFTR---EGMV-- 164 (296)
T ss_dssp HHHHHSCCSSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC---------------C--CSCH---HHHH--
T ss_pred HHHHhcCCCCCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCCCCC----ch-HHHHhcc--cCCc---hHHH--
Confidence 99999998 899999999999999999999999999999999865331111 00 0000000 0000 0000
Q ss_pred HHHHhhHHHHHhhccchhHHH-HHHH---HhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCc
Q 012188 324 YEHISRTICLLICKNHRVWEF-LAKL---VTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCD 399 (468)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 399 (468)
..............+. .... ......... ............. .......+.++++|
T Consensus 165 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~--~~~~~~~l~~i~~P 224 (296)
T 1j1i_A 165 -----HLVKALTNDGFKIDDAMINSRYTYATDEATRKA-------------YVATMQWIREQGG--LFYDPEFIRKVQVP 224 (296)
T ss_dssp -----HHHHHHSCTTCCCCHHHHHHHHHHHHSHHHHHH-------------HHHHHHHHHHHTS--SBCCHHHHTTCCSC
T ss_pred -----HHHHHhccCcccccHHHHHHHHHHhhCcchhhH-------------HHHHHHHHHhccc--ccccHHHhhcCCCC
Confidence 0000000000000000 0000 000000000 0000000000000 01122335788999
Q ss_pred EEEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhcCCCCCCCCCC
Q 012188 400 VNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSSSGHEPSENHH 468 (468)
Q Consensus 400 vLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~~~~~~~~~~ 468 (468)
+|+|+|++|.++|++.++.+.+.+|++++++++++||+++. |+|+++++.|.+||++.....|...||
T Consensus 225 ~Lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~~~~~~~~~~~ 292 (296)
T 1j1i_A 225 TLVVQGKDDKVVPVETAYKFLDLIDDSWGYIIPHCGHWAMI-EHPEDFANATLSFLSLRVDITPAAAHH 292 (296)
T ss_dssp EEEEEETTCSSSCHHHHHHHHHHCTTEEEEEESSCCSCHHH-HSHHHHHHHHHHHHHHC----------
T ss_pred EEEEEECCCcccCHHHHHHHHHHCCCCEEEEECCCCCCchh-cCHHHHHHHHHHHHhccCCcCchhhhc
Confidence 99999999999999999999999999999999999999997 899999999999999887766655544
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A | Back alignment and structure |
|---|
Probab=99.98 E-value=9.1e-31 Score=243.80 Aligned_cols=241 Identities=15% Similarity=0.211 Sum_probs=162.6
Q ss_pred CCCceeEEEecCCCCeEEEEecCCCC-ccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCC---HHHHHHHHH
Q 012188 168 DCDCKFCTCWSSSSRDTLFVKTQGPS-AFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYT---VREHLDMIE 243 (468)
Q Consensus 168 d~~~~~~~~~~~~~p~vl~lHG~g~s-~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t---~~~~~~di~ 243 (468)
++..++|..+++++|+|||+||++++ ...+..+++.|. ++||+|+++|+||||.|+.+. ..++ +.++++++
T Consensus 10 ~g~~l~~~~~g~~~~~vvllHG~~~~~~~~~~~~~~~l~---~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~~~~~- 84 (254)
T 2ocg_A 10 NGVQLHYQQTGEGDHAVLLLPGMLGSGETDFGPQLKNLN---KKLFTVVAWDPRGYGHSRPPD-RDFPADFFERDAKDA- 84 (254)
T ss_dssp TTEEEEEEEEECCSEEEEEECCTTCCHHHHCHHHHHHSC---TTTEEEEEECCTTSTTCCSSC-CCCCTTHHHHHHHHH-
T ss_pred CCEEEEEEEecCCCCeEEEECCCCCCCccchHHHHHHHh---hCCCeEEEECCCCCCCCCCCC-CCCChHHHHHHHHHH-
Confidence 45568888887766799999998877 443335677776 467999999999999997654 3456 77888888
Q ss_pred HHHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHH
Q 012188 244 KSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACW 323 (468)
Q Consensus 244 ~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (468)
..++++++.++++++||||||.+|+.+|.++|++|+++|+++++..... ..............|.. . .
T Consensus 85 ~~~l~~l~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~----~~~~~~~~~~~~~~~~~-----~---~ 152 (254)
T 2ocg_A 85 VDLMKALKFKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTD----EDSMIYEGIRDVSKWSE-----R---T 152 (254)
T ss_dssp HHHHHHTTCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCH----HHHHHHHTTSCGGGSCH-----H---H
T ss_pred HHHHHHhCCCCEEEEEECHhHHHHHHHHHHChHHhhheeEeccccccCh----hhHHHHHHHHHHHHHHH-----H---h
Confidence 5889999999999999999999999999999999999999997643210 00111111111000100 0 0
Q ss_pred HHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEE
Q 012188 324 YEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVF 403 (468)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii 403 (468)
...+.. .+. . ...... ...+ . ..+...... .........+.++++|+|++
T Consensus 153 ~~~~~~----~~~--~---~~~~~~-----~~~~-~------------~~~~~~~~~---~~~~~~~~~l~~i~~P~lii 202 (254)
T 2ocg_A 153 RKPLEA----LYG--Y---DYFART-----CEKW-V------------DGIRQFKHL---PDGNICRHLLPRVQCPALIV 202 (254)
T ss_dssp HHHHHH----HHC--H---HHHHHH-----HHHH-H------------HHHHGGGGS---GGGBSSGGGGGGCCSCEEEE
T ss_pred HHHHHH----Hhc--c---hhhHHH-----HHHH-H------------HHHHHHHhc---cCCchhhhhhhcccCCEEEE
Confidence 000000 000 0 000000 0000 0 000000000 00011223457889999999
Q ss_pred eeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHh
Q 012188 404 HGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWR 456 (468)
Q Consensus 404 ~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~ 456 (468)
+|++|.++|.+.++.+.+.+|++++++++++||+++. ++|+++++.|.+||+
T Consensus 203 ~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~ 254 (254)
T 2ocg_A 203 HGEKDPLVPRFHADFIHKHVKGSRLHLMPEGKHNLHL-RFADEFNKLAEDFLQ 254 (254)
T ss_dssp EETTCSSSCHHHHHHHHHHSTTCEEEEETTCCTTHHH-HTHHHHHHHHHHHHC
T ss_pred ecCCCccCCHHHHHHHHHhCCCCEEEEcCCCCCchhh-hCHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999997 899999999999983
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} | Back alignment and structure |
|---|
Probab=99.97 E-value=3e-31 Score=253.63 Aligned_cols=254 Identities=19% Similarity=0.196 Sum_probs=164.3
Q ss_pred CceeEEEecC-C-CCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCC-CCCCHHHHHHHHHHHH
Q 012188 170 DCKFCTCWSS-S-SRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD-SLYTVREHLDMIEKSV 246 (468)
Q Consensus 170 ~~~~~~~~~~-~-~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~-~~~t~~~~~~di~~~l 246 (468)
..++|..+++ + +|+|||+||++++...|..+++.|+ ++||+|+++|+||||.|+.+.. ..|+++++++++ ..+
T Consensus 33 ~~l~y~~~G~~~~g~~vvllHG~~~~~~~w~~~~~~L~---~~g~rvia~Dl~G~G~S~~~~~~~~~~~~~~a~dl-~~l 108 (297)
T 2xt0_A 33 LRMHYVDEGPRDAEHTFLCLHGEPSWSFLYRKMLPVFT---AAGGRVVAPDLFGFGRSDKPTDDAVYTFGFHRRSL-LAF 108 (297)
T ss_dssp CCEEEEEESCTTCSCEEEEECCTTCCGGGGTTTHHHHH---HTTCEEEEECCTTSTTSCEESCGGGCCHHHHHHHH-HHH
T ss_pred eEEEEEEccCCCCCCeEEEECCCCCcceeHHHHHHHHH---hCCcEEEEeCCCCCCCCCCCCCcccCCHHHHHHHH-HHH
Confidence 6788888874 4 7899999999987776667888887 3579999999999999987654 468999999999 699
Q ss_pred hcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHH
Q 012188 247 IEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEH 326 (468)
Q Consensus 247 ~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (468)
++++++++++|+||||||.+|+.+|.++|++|+++|++++.......................... .. ....
T Consensus 109 l~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~- 180 (297)
T 2xt0_A 109 LDALQLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAVGLSPGKGFESWRDFVANSPDLD---VG----KLMQ- 180 (297)
T ss_dssp HHHHTCCSEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCCCCSSSCSCHHHHHHHHHHHTCTTCC---HH----HHHH-
T ss_pred HHHhCCCCEEEEEECchHHHHHHHHHhChHHhcEEEEECCCCCcccCCchhHHHHHHHhhcccccc---hh----HHHh-
Confidence 999999999999999999999999999999999999999854111100100011111000000000 00 0000
Q ss_pred HhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccc----cccchHHHhhc-cCCCcEE
Q 012188 327 ISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTAN----KLDGYLDAVRN-HVKCDVN 401 (468)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~i~~PvL 401 (468)
. .. ....+.... .+. ..+...........+......... .........+. ++++|+|
T Consensus 181 --~----~~---~~~~~~~~~--------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~P~L 242 (297)
T 2xt0_A 181 --R----AI---PGITDAEVA--------AYD-APFPGPEFKAGVRRFPAIVPITPDMEGAEIGRQAMSFWSTQWSGPTF 242 (297)
T ss_dssp --H----HS---TTCCHHHHH--------HHH-TTCSSGGGCHHHHHGGGGSCCSTTSTTHHHHHHHHHHHHHTCCSCEE
T ss_pred --c----cC---ccCCHHHHH--------HHh-ccccCcchhHHHHHHHHhCccccccchhhHHHHHHHHhhhccCCCeE
Confidence 0 00 000000000 000 000000000000000000000000 00011233456 8899999
Q ss_pred EEeeCCCCccChhhHHHHHHhCCCCeEEE--ecCCCccccccCcHHHHHHHHHHHHh
Q 012188 402 VFHGEDDELIPVECSYNVQRKIPRARVKV--IEKKDHITIVVGRQKTFARELEEIWR 456 (468)
Q Consensus 402 ii~G~~D~~vp~~~~~~l~~~~p~~~l~~--i~~~gH~~~~~e~p~~~~~~i~~fl~ 456 (468)
+|+|++|.++| +.++.+.+.+|++++.+ ++++||+++ . +|++|++.|.+||+
T Consensus 243 vi~G~~D~~~~-~~~~~~~~~~p~~~~~~~~~~~~GH~~~-~-~p~~~~~~i~~fl~ 296 (297)
T 2xt0_A 243 MAVGAQDPVLG-PEVMGMLRQAIRGCPEPMIVEAGGHFVQ-E-HGEPIARAALAAFG 296 (297)
T ss_dssp EEEETTCSSSS-HHHHHHHHHHSTTCCCCEEETTCCSSGG-G-GCHHHHHHHHHHTT
T ss_pred EEEeCCCcccC-hHHHHHHHhCCCCeeEEeccCCCCcCcc-c-CHHHHHHHHHHHHh
Confidence 99999999999 88899999999987664 789999998 5 99999999999985
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.97 E-value=4e-31 Score=248.51 Aligned_cols=258 Identities=14% Similarity=0.122 Sum_probs=162.3
Q ss_pred eeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccC
Q 012188 172 KFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNK 251 (468)
Q Consensus 172 ~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~ 251 (468)
++|..++ ++++|||+||++++...|..+++.|+ ++|+|+++|+||||.|+.+....++++++++++ ..+++.++
T Consensus 8 ~~y~~~G-~g~~vvllHG~~~~~~~~~~~~~~L~----~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~dl-~~~l~~l~ 81 (269)
T 2xmz_A 8 FYEANVE-TNQVLVFLHGFLSDSRTYHNHIEKFT----DNYHVITIDLPGHGEDQSSMDETWNFDYITTLL-DRILDKYK 81 (269)
T ss_dssp EECCSSC-CSEEEEEECCTTCCGGGGTTTHHHHH----TTSEEEEECCTTSTTCCCCTTSCCCHHHHHHHH-HHHHGGGT
T ss_pred EEEEEcC-CCCeEEEEcCCCCcHHHHHHHHHHHh----hcCeEEEecCCCCCCCCCCCCCccCHHHHHHHH-HHHHHHcC
Confidence 4444433 45689999999987776667888887 679999999999999987654358999999999 69999999
Q ss_pred CceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHH-HHHhhH
Q 012188 252 VKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWY-EHISRT 330 (468)
Q Consensus 252 ~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 330 (468)
.++++|+||||||.+|+.+|.++|++|+++|+++++...... ......... ......... ......
T Consensus 82 ~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~----~~~~~~~~~---------~~~~~~~~~~~~~~~~ 148 (269)
T 2xmz_A 82 DKSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEE----ANQLERRLV---------DDARAKVLDIAGIELF 148 (269)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHCSSCCSEEEEESCCSCCSSH----HHHHHHHHH---------HHHHHHHHHHHCHHHH
T ss_pred CCcEEEEEECchHHHHHHHHHhCchheeeeEEEcCCcccCCc----hhHHHHhhh---------hhHHHHhhccccHHHH
Confidence 999999999999999999999999999999999975432111 011000000 000000000 000000
Q ss_pred HHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCc
Q 012188 331 ICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDEL 410 (468)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~ 410 (468)
..... ....+... .... ......+........ ..... ..+..............+.++++|+++|+|++|.+
T Consensus 149 ~~~~~-~~~~~~~~--~~~~-~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~ 220 (269)
T 2xmz_A 149 VNDWE-KLPLFQSQ--LELP-VEIQHQIRQQRLSQS-PHKMA---KALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEK 220 (269)
T ss_dssp HHHHT-TSGGGGGG--GGSC-HHHHHHHHHHHHTSC-HHHHH---HHHHHHSTTTSCCCGGGGGGCCSCEEEEEETTCHH
T ss_pred HHHHH-hCcccccc--ccCC-HHHHHHHHHHHhccC-cHHHH---HHHHHHHhccCccHHHHHHhcCCCEEEEEeCCCcc
Confidence 00000 00000000 0000 000000000000000 00000 01100000011122334578899999999999999
Q ss_pred cChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 411 IPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 411 vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
+|.+..+ +.+.+|++++++++++||+++. |+|+++++.|.+||++.
T Consensus 221 ~~~~~~~-~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~ 266 (269)
T 2xmz_A 221 FVQIAKK-MANLIPNSKCKLISATGHTIHV-EDSDEFDTMILGFLKEE 266 (269)
T ss_dssp HHHHHHH-HHHHSTTEEEEEETTCCSCHHH-HSHHHHHHHHHHHHHHH
T ss_pred cCHHHHH-HHhhCCCcEEEEeCCCCCChhh-cCHHHHHHHHHHHHHHh
Confidence 9988765 8889999999999999999998 89999999999999864
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=5e-31 Score=249.59 Aligned_cols=256 Identities=13% Similarity=0.141 Sum_probs=161.7
Q ss_pred CCCceeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHh
Q 012188 168 DCDCKFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVI 247 (468)
Q Consensus 168 d~~~~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~ 247 (468)
++..++|..++ ++++|||+||++++...|..+++.|. ++||+|+++|+||||.|+.+.. .++++++++|+ ..++
T Consensus 15 ~g~~l~y~~~G-~g~~vvllHG~~~~~~~w~~~~~~l~---~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~a~dl-~~ll 88 (281)
T 3fob_A 15 APIEIYYEDHG-TGKPVVLIHGWPLSGRSWEYQVPALV---EAGYRVITYDRRGFGKSSQPWE-GYEYDTFTSDL-HQLL 88 (281)
T ss_dssp EEEEEEEEEES-SSEEEEEECCTTCCGGGGTTTHHHHH---HTTEEEEEECCTTSTTSCCCSS-CCSHHHHHHHH-HHHH
T ss_pred CceEEEEEECC-CCCeEEEECCCCCcHHHHHHHHHHHH---hCCCEEEEeCCCCCCCCCCCcc-ccCHHHHHHHH-HHHH
Confidence 45557777765 46899999999987766656777775 3789999999999999987653 58999999999 6999
Q ss_pred cccCCceEEEEEEcccHHHHHHHHHh-CCCccceEEEecCCCCCCCCC---ch--hhHHHHHhhcCCCCCchhhhhhhhH
Q 012188 248 EPNKVKSFHIVAHSLGCILALALAVK-HPGSVKSLTLLAPPYYPVPKG---AQ--ASQYVMRKVAPRRVWPLIAFGASMA 321 (468)
Q Consensus 248 ~~l~~~~i~lvGhS~Gg~ial~~a~~-~p~~v~~lVl~~p~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (468)
++++.++++|+||||||.+++.++++ +|++++++|++++........ .. .......... .....
T Consensus 89 ~~l~~~~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~ 158 (281)
T 3fob_A 89 EQLELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGALDDATIETFK----------SGVIN 158 (281)
T ss_dssp HHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSSTTCSBCHHHHHHHH----------HHHHH
T ss_pred HHcCCCcEEEEEECccHHHHHHHHHHccccceeEEEEecCCCcchhccccccccccchhHHHHHH----------HHhhh
Confidence 99999999999999999988776665 589999999999653211000 00 0000000000 00000
Q ss_pred HHHHHHhhHHHHHhhcc---chhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCC
Q 012188 322 CWYEHISRTICLLICKN---HRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKC 398 (468)
Q Consensus 322 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 398 (468)
.....+.......+... ....+... ..................+... ........+.++++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~-------~~~d~~~~l~~i~~ 222 (281)
T 3fob_A 159 DRLAFLDEFTKGFFAAGDRTDLVSESFR---------LYNWDIAAGASPKGTLDCITAF-------SKTDFRKDLEKFNI 222 (281)
T ss_dssp HHHHHHHHHHHHHTCBTTBCCSSCHHHH---------HHHHHHHHTSCHHHHHHHHHHH-------HHCCCHHHHTTCCS
T ss_pred hHHHHHHHHHHHhcccccccccchHHHH---------HHhhhhhcccChHHHHHHHHHc-------cccchhhhhhhcCC
Confidence 00000000000000000 00000000 0000000000000000000000 01122344578999
Q ss_pred cEEEEeeCCCCccChhhH-HHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHh
Q 012188 399 DVNVFHGEDDELIPVECS-YNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWR 456 (468)
Q Consensus 399 PvLii~G~~D~~vp~~~~-~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~ 456 (468)
|+|+|+|++|.++|++.+ +.+.+.+|++++++++++||+++. |+|++|++.|.+||+
T Consensus 223 P~Lii~G~~D~~~p~~~~~~~~~~~~p~~~~~~i~~~gH~~~~-e~p~~~~~~i~~Fl~ 280 (281)
T 3fob_A 223 PTLIIHGDSDATVPFEYSGKLTHEAIPNSKVALIKGGPHGLNA-THAKEFNEALLLFLK 280 (281)
T ss_dssp CEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTHHH-HTHHHHHHHHHHHHC
T ss_pred CEEEEecCCCCCcCHHHHHHHHHHhCCCceEEEeCCCCCchhh-hhHHHHHHHHHHHhh
Confidence 999999999999999975 777888999999999999999997 999999999999996
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=248.96 Aligned_cols=258 Identities=16% Similarity=0.173 Sum_probs=166.3
Q ss_pred CC-CceeEEEecCCC-CeEEEEecCC---CCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHH
Q 012188 168 DC-DCKFCTCWSSSS-RDTLFVKTQG---PSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMI 242 (468)
Q Consensus 168 d~-~~~~~~~~~~~~-p~vl~lHG~g---~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di 242 (468)
++ ..++|..++++. |+|||+||++ .+...|..+++.|+ ++|+|+++|+||||.|+.+....++++++++++
T Consensus 21 ~g~~~l~y~~~G~g~~~~vvllHG~~pg~~~~~~w~~~~~~L~----~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl 96 (291)
T 2wue_A 21 DGPLKLHYHEAGVGNDQTVVLLHGGGPGAASWTNFSRNIAVLA----RHFHVLAVDQPGYGHSDKRAEHGQFNRYAAMAL 96 (291)
T ss_dssp SSEEEEEEEEECTTCSSEEEEECCCCTTCCHHHHTTTTHHHHT----TTSEEEEECCTTSTTSCCCSCCSSHHHHHHHHH
T ss_pred CCcEEEEEEecCCCCCCcEEEECCCCCccchHHHHHHHHHHHH----hcCEEEEECCCCCCCCCCCCCCCcCHHHHHHHH
Confidence 45 567888776432 4999999986 54444445677777 679999999999999987765468999999999
Q ss_pred HHHHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCc----hhhHHHHHhhcCCCCCchhhhhh
Q 012188 243 EKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGA----QASQYVMRKVAPRRVWPLIAFGA 318 (468)
Q Consensus 243 ~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 318 (468)
..+++++++++++|+||||||.+|+.+|.++|++|+++|++++......... ............ +..
T Consensus 97 -~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---- 167 (291)
T 2wue_A 97 -KGLFDQLGLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSINLFAPDPTEGVKRLSKFSVA----PTR---- 167 (291)
T ss_dssp -HHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSSSCCCSSSCSSCHHHHHHHHHHHS----CCH----
T ss_pred -HHHHHHhCCCCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCCCCccccccccchhhHHHHHHhcc----CCH----
Confidence 6999999999999999999999999999999999999999998654321110 011111111000 000
Q ss_pred hhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhccc--ccccchHHHhhccC
Q 012188 319 SMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTA--NKLDGYLDAVRNHV 396 (468)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i 396 (468)
..................+..... .... . ........+........ ..........+.++
T Consensus 168 ------~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 229 (291)
T 2wue_A 168 ------ENLEAFLRVMVYDKNLITPELVDQ----RFAL-----A---STPESLTATRAMGKSFAGADFEAGMMWREVYRL 229 (291)
T ss_dssp ------HHHHHHHHTSCSSGGGSCHHHHHH----HHHH-----H---TSHHHHHHHHHHHHHHTSTTGGGGCGGGTGGGC
T ss_pred ------HHHHHHHHHhccCcccCCHHHHHH----HHHH-----h---cCchHHHHHHHHHhhccccccccchhHHHHhhC
Confidence 000000000000000000000000 0000 0 00000000000000000 00001111345788
Q ss_pred CCcEEEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 397 KCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 397 ~~PvLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
++|+|+|+|++|.++|++.++.+.+.+|++++++++++||+++. |+|+++++.|.+||++
T Consensus 230 ~~P~lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 289 (291)
T 2wue_A 230 RQPVLLIWGREDRVNPLDGALVALKTIPRAQLHVFGQCGHWVQV-EKFDEFNKLTIEFLGG 289 (291)
T ss_dssp CSCEEEEEETTCSSSCGGGGHHHHHHSTTEEEEEESSCCSCHHH-HTHHHHHHHHHHHTTC
T ss_pred CCCeEEEecCCCCCCCHHHHHHHHHHCCCCeEEEeCCCCCChhh-hCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999997 8999999999999975
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A | Back alignment and structure |
|---|
Probab=99.97 E-value=9.2e-31 Score=246.90 Aligned_cols=259 Identities=17% Similarity=0.173 Sum_probs=164.9
Q ss_pred CCCCceeEEEecC-CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 012188 167 SDCDCKFCTCWSS-SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKS 245 (468)
Q Consensus 167 ~d~~~~~~~~~~~-~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~ 245 (468)
.||..++|..|++ ++|+|||+||++++...|..+++.|. ++||+|+++|+||||.|+.+. ..++++++++|+ ..
T Consensus 7 ~~g~~l~y~~~g~~~~~~vvllHG~~~~~~~w~~~~~~L~---~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~~d~-~~ 81 (276)
T 1zoi_A 7 KDGVQIFYKDWGPRDAPVIHFHHGWPLSADDWDAQLLFFL---AHGYRVVAHDRRGHGRSSQVW-DGHDMDHYADDV-AA 81 (276)
T ss_dssp TTSCEEEEEEESCTTSCEEEEECCTTCCGGGGHHHHHHHH---HTTCEEEEECCTTSTTSCCCS-SCCSHHHHHHHH-HH
T ss_pred CCCcEEEEEecCCCCCCeEEEECCCCcchhHHHHHHHHHH---hCCCEEEEecCCCCCCCCCCC-CCCCHHHHHHHH-HH
Confidence 3667788888874 57899999999887776666778776 468999999999999998654 358999999999 69
Q ss_pred HhcccCCceEEEEEEcccHHHHHHHHHhC-CCccceEEEecCCCCCCCCCc---h-hhHHHHHhhcCCCCCchhhhhhhh
Q 012188 246 VIEPNKVKSFHIVAHSLGCILALALAVKH-PGSVKSLTLLAPPYYPVPKGA---Q-ASQYVMRKVAPRRVWPLIAFGASM 320 (468)
Q Consensus 246 l~~~l~~~~i~lvGhS~Gg~ial~~a~~~-p~~v~~lVl~~p~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~ 320 (468)
++++++.++++|+||||||.+++.+|+++ |++|+++|++++......... . ........+.. ......
T Consensus 82 ~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ 154 (276)
T 1zoi_A 82 VVAHLGIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGNPGGLPKSVFDGFQA-------QVASNR 154 (276)
T ss_dssp HHHHHTCTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCCCSCCBCCSSCTTSBCHHHHHHHHH-------HHHHCH
T ss_pred HHHHhCCCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCCCccccccccccccccHHHHHHHHH-------HHHHhH
Confidence 99999999999999999999999988887 999999999997432110000 0 00000000000 000000
Q ss_pred HHHHHHHhhHHHHHhhcc---chhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCC
Q 012188 321 ACWYEHISRTICLLICKN---HRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVK 397 (468)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 397 (468)
..+...+... ..+... ....+... ..+...... .........+.. +. .......+.+++
T Consensus 155 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~--------~~~~~~~~~-~~~~~~~~~~~~-~~------~~~~~~~l~~i~ 216 (276)
T 1zoi_A 155 AQFYRDVPAG--PFYGYNRPGVEASEGII--------GNWWRQGMI-GSAKAHYDGIVA-FS------QTDFTEDLKGIQ 216 (276)
T ss_dssp HHHHHHHHHT--TTTTTTSTTCCCCHHHH--------HHHHHHHHH-SCHHHHHHHHHH-HH------SCCCHHHHHHCC
T ss_pred HHHHHHhhhc--cccccccccccccHHHH--------HHHHhhhhh-hhHHHHHHHHHH-hc------ccchhhhccccC
Confidence 0000000000 000000 00000000 000000000 000000000000 00 111233457889
Q ss_pred CcEEEEeeCCCCccChh-hHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHh
Q 012188 398 CDVNVFHGEDDELIPVE-CSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWR 456 (468)
Q Consensus 398 ~PvLii~G~~D~~vp~~-~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~ 456 (468)
+|+|+|+|++|.++|++ ..+.+.+.+|++++++++++||+++. ++|+++++.|.+||+
T Consensus 217 ~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~ 275 (276)
T 1zoi_A 217 QPVLVMHGDDDQIVPYENSGVLSAKLLPNGALKTYKGYPHGMPT-THADVINADLLAFIR 275 (276)
T ss_dssp SCEEEEEETTCSSSCSTTTHHHHHHHSTTEEEEEETTCCTTHHH-HTHHHHHHHHHHHHT
T ss_pred CCEEEEEcCCCcccChHHHHHHHHhhCCCceEEEcCCCCCchhh-hCHHHHHHHHHHHhc
Confidence 99999999999999988 56677788999999999999999997 899999999999995
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.2e-31 Score=247.66 Aligned_cols=247 Identities=13% Similarity=0.197 Sum_probs=162.3
Q ss_pred EEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCC---CCCCCHHHHHHHHHHHHhccc
Q 012188 174 CTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPT---DSLYTVREHLDMIEKSVIEPN 250 (468)
Q Consensus 174 ~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~---~~~~t~~~~~~di~~~l~~~l 250 (468)
|..+++++|+|||+||++++...|..+++.|+ ++|+|+++|+||||.|+.+. ...++++++++|+ ..+++.+
T Consensus 13 ~~~~G~g~~~vvllHG~~~~~~~w~~~~~~L~----~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl-~~~l~~l 87 (271)
T 1wom_A 13 VKVKGSGKASIMFAPGFGCDQSVWNAVAPAFE----EDHRVILFDYVGSGHSDLRAYDLNRYQTLDGYAQDV-LDVCEAL 87 (271)
T ss_dssp CEEEECCSSEEEEECCTTCCGGGGTTTGGGGT----TTSEEEECCCSCCSSSCCTTCCTTGGGSHHHHHHHH-HHHHHHT
T ss_pred eEeecCCCCcEEEEcCCCCchhhHHHHHHHHH----hcCeEEEECCCCCCCCCCCcccccccccHHHHHHHH-HHHHHHc
Confidence 34456666899999999887776667888887 78999999999999998654 2346899999999 6999999
Q ss_pred CCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCC--c---hhhHHHHHhhcCCCCCchhhhhhhhHHHHH
Q 012188 251 KVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKG--A---QASQYVMRKVAPRRVWPLIAFGASMACWYE 325 (468)
Q Consensus 251 ~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (468)
+.++++++||||||.+++.+|.++|++|+++|++++........ . ........... ........|..
T Consensus 88 ~~~~~~lvGhS~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 159 (271)
T 1wom_A 88 DLKETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLE--------MMEKNYIGWAT 159 (271)
T ss_dssp TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETTTEECSBCHHHHHHHHH--------HHHHCHHHHHH
T ss_pred CCCCeEEEEeCHHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCchhccCCCHHHHHHHHH--------HHhhhHHHHHH
Confidence 99999999999999999999999999999999999753211000 0 00000000000 00000000100
Q ss_pred HHhhHHHHHhhc--cchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEE
Q 012188 326 HISRTICLLICK--NHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVF 403 (468)
Q Consensus 326 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii 403 (468)
.+.. ..... .....+... ..+... ............. .......+.++++|+++|
T Consensus 160 ~~~~---~~~~~~~~~~~~~~~~-------------~~~~~~-~~~~~~~~~~~~~------~~~~~~~l~~i~~P~lvi 216 (271)
T 1wom_A 160 VFAA---TVLNQPDRPEIKEELE-------------SRFCST-DPVIARQFAKAAF------FSDHREDLSKVTVPSLIL 216 (271)
T ss_dssp HHHH---HHHCCTTCHHHHHHHH-------------HHHHHS-CHHHHHHHHHHHH------SCCCHHHHTTCCSCEEEE
T ss_pred HHHH---HHhcCCCchHHHHHHH-------------HHHhcC-CcHHHHHHHHHHh------CcchHHhccccCCCEEEE
Confidence 0000 00000 000000000 000000 0000000000000 011233457889999999
Q ss_pred eeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 404 HGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 404 ~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
+|++|.++|.+.++.+.+.+|++++++++++||+++. |+|+++++.|.+|+++
T Consensus 217 ~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 269 (271)
T 1wom_A 217 QCADDIIAPATVGKYMHQHLPYSSLKQMEARGHCPHM-SHPDETIQLIGDYLKA 269 (271)
T ss_dssp EEETCSSSCHHHHHHHHHHSSSEEEEEEEEESSCHHH-HCHHHHHHHHHHHHHH
T ss_pred EcCCCCcCCHHHHHHHHHHCCCCEEEEeCCCCcCccc-cCHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999997 8999999999999975
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.3e-31 Score=248.61 Aligned_cols=256 Identities=13% Similarity=0.109 Sum_probs=162.2
Q ss_pred CCCceeEEEe--cCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 012188 168 DCDCKFCTCW--SSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKS 245 (468)
Q Consensus 168 d~~~~~~~~~--~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~ 245 (468)
++..++|..+ ++++|+|||+||++.+...|..+++.|+ ++|+|+++|+||||.|+.+. ..|+++++++|+ .+
T Consensus 12 ~g~~l~y~~~~~G~~~p~vvllHG~~~~~~~w~~~~~~L~----~~~rvia~DlrGhG~S~~~~-~~~~~~~~a~dl-~~ 85 (276)
T 2wj6_A 12 FDNKLSYIDNQRDTDGPAILLLPGWCHDHRVYKYLIQELD----ADFRVIVPNWRGHGLSPSEV-PDFGYQEQVKDA-LE 85 (276)
T ss_dssp TTEEEEEEECCCCCSSCEEEEECCTTCCGGGGHHHHHHHT----TTSCEEEECCTTCSSSCCCC-CCCCHHHHHHHH-HH
T ss_pred CCeEEEEEEecCCCCCCeEEEECCCCCcHHHHHHHHHHHh----cCCEEEEeCCCCCCCCCCCC-CCCCHHHHHHHH-HH
Confidence 4556888888 6566899999999988776667888887 78999999999999998764 468999999999 69
Q ss_pred HhcccCCceEEEEEEcccHHHHHHHHHhC-CCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHH
Q 012188 246 VIEPNKVKSFHIVAHSLGCILALALAVKH-PGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWY 324 (468)
Q Consensus 246 l~~~l~~~~i~lvGhS~Gg~ial~~a~~~-p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (468)
+++++++++++|+||||||.+|+.+|.++ |++|+++|++++....... ..............+ .
T Consensus 86 ll~~l~~~~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~~~~~~~~---~~~~~~~~~~~~~~~------------~ 150 (276)
T 2wj6_A 86 ILDQLGVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPKP---DFAKSLTLLKDPERW------------R 150 (276)
T ss_dssp HHHHHTCCSEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESCCCSSCCH---HHHHHHHHHHCTTTH------------H
T ss_pred HHHHhCCCceEEEEECHHHHHHHHHHHHhCHHhhceEEEecccccCCCc---hHHHHhhhccCcchH------------H
Confidence 99999999999999999999999999999 9999999999975321110 011111111000000 0
Q ss_pred HHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEe
Q 012188 325 EHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFH 404 (468)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~ 404 (468)
............... .. .....+....... ....+............. .......+..+++|+++++
T Consensus 151 ~~~~~~~~~~~~~~~--~~---------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~P~lv~~ 217 (276)
T 2wj6_A 151 EGTHGLFDVWLDGHD--EK---------RVRHHLLEEMADY-GYDCWGRSGRVIEDAYGR-NGSPMQMMANLTKTRPIRH 217 (276)
T ss_dssp HHHHHHHHHHHTTBC--CH---------HHHHHHHTTTTTC-CHHHHHHHHHHHHHHHHH-HCCHHHHHHTCSSCCCEEE
T ss_pred HHHHHHHHHhhcccc--hH---------HHHHHHHHHhhhc-chhhhhhccchhHHHHhh-ccchhhHHhhcCCCceEEE
Confidence 000000000000000 00 0000000000000 000000000000000000 0011233567899999988
Q ss_pred eCCCCccC--hhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 405 GEDDELIP--VECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 405 G~~D~~vp--~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
|..|...+ ....+.+.+.+|++++++++++||+++. |+|++|++.|.+||++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~p~a~~~~i~~~gH~~~~-e~P~~~~~~i~~Fl~~~ 272 (276)
T 2wj6_A 218 IFSQPTEPEYEKINSDFAEQHPWFSYAKLGGPTHFPAI-DVPDRAAVHIREFATAI 272 (276)
T ss_dssp EECCSCSHHHHHHHHHHHHHCTTEEEEECCCSSSCHHH-HSHHHHHHHHHHHHHHH
T ss_pred EecCccchhHHHHHHHHHhhCCCeEEEEeCCCCCcccc-cCHHHHHHHHHHHHhhc
Confidence 74433222 3445678888999999999999999997 99999999999999764
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.97 E-value=6.1e-30 Score=240.59 Aligned_cols=258 Identities=17% Similarity=0.196 Sum_probs=163.5
Q ss_pred CCCCceeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 012188 167 SDCDCKFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSV 246 (468)
Q Consensus 167 ~d~~~~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l 246 (468)
.++..++|..|+ ++|+|||+||++.+...|..+++.|. ++||+|+++|+||||.|+.+. ..++++++++|+ ..+
T Consensus 6 ~~g~~l~y~~~g-~~~~vvllHG~~~~~~~~~~~~~~L~---~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~~dl-~~~ 79 (273)
T 1a8s_A 6 RDGTQIYYKDWG-SGQPIVFSHGWPLNADSWESQMIFLA---AQGYRVIAHDRRGHGRSSQPW-SGNDMDTYADDL-AQL 79 (273)
T ss_dssp TTSCEEEEEEES-CSSEEEEECCTTCCGGGGHHHHHHHH---HTTCEEEEECCTTSTTSCCCS-SCCSHHHHHHHH-HHH
T ss_pred CCCcEEEEEEcC-CCCEEEEECCCCCcHHHHhhHHhhHh---hCCcEEEEECCCCCCCCCCCC-CCCCHHHHHHHH-HHH
Confidence 366778888887 56899999999887776666778776 468999999999999998664 358999999999 699
Q ss_pred hcccCCceEEEEEEcccHHHHHHHHHhC-CCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHH
Q 012188 247 IEPNKVKSFHIVAHSLGCILALALAVKH-PGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYE 325 (468)
Q Consensus 247 ~~~l~~~~i~lvGhS~Gg~ial~~a~~~-p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (468)
++.++.++++|+||||||.+++.+++++ |++|+++|++++.......... .+ ...+...+.........
T Consensus 80 l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~---------~~-~~~~~~~~~~~~~~~~~ 149 (273)
T 1a8s_A 80 IEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEA---------NP-GGLPMEVFDGIRQASLA 149 (273)
T ss_dssp HHHTTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSS---------CT-TSBCHHHHHHHHHHHHH
T ss_pred HHHhCCCCeEEEEeChHHHHHHHHHHhcCchheeEEEEEcccCcccccCcc---------cc-ccCcHHHHHHHHHHhHh
Confidence 9999999999999999999999988776 9999999999964321100000 00 00000000000000000
Q ss_pred HHhhHHHHHhh----c-c---chhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCC
Q 012188 326 HISRTICLLIC----K-N---HRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVK 397 (468)
Q Consensus 326 ~~~~~~~~~~~----~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 397 (468)
........... . . ....+.. ...+...... ............. . .......+.+++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~-~~~~~~~~~~~~~-~------~~~~~~~l~~i~ 213 (273)
T 1a8s_A 150 DRSQLYKDLASGPFFGFNQPGAKSSAGM--------VDWFWLQGMA-AGHKNAYDCIKAF-S------ETDFTEDLKKID 213 (273)
T ss_dssp HHHHHHHHHHHTTSSSTTSTTCCCCHHH--------HHHHHHHHHH-SCHHHHHHHHHHH-H------HCCCHHHHHTCC
T ss_pred hHHHHHHHhhcccccCcCCcccccCHHH--------HHHHHHhccc-cchhHHHHHHHHH-h------ccChhhhhhcCC
Confidence 00000000000 0 0 0000000 0000000000 0000000000000 0 011223357889
Q ss_pred CcEEEEeeCCCCccChh-hHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 398 CDVNVFHGEDDELIPVE-CSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 398 ~PvLii~G~~D~~vp~~-~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
+|+|+++|++|.++|++ ..+.+.+.+|++++++++++||+++. ++|+++++.|.+||++
T Consensus 214 ~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~~ 273 (273)
T 1a8s_A 214 VPTLVVHGDADQVVPIEASGIASAALVKGSTLKIYSGAPHGLTD-THKDQLNADLLAFIKG 273 (273)
T ss_dssp SCEEEEEETTCSSSCSTTTHHHHHHHSTTCEEEEETTCCSCHHH-HTHHHHHHHHHHHHHC
T ss_pred CCEEEEECCCCccCChHHHHHHHHHhCCCcEEEEeCCCCCcchh-hCHHHHHHHHHHHHhC
Confidence 99999999999999988 45677778899999999999999997 8999999999999963
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.97 E-value=8.7e-30 Score=239.68 Aligned_cols=257 Identities=20% Similarity=0.213 Sum_probs=163.0
Q ss_pred CCCCceeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 012188 167 SDCDCKFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSV 246 (468)
Q Consensus 167 ~d~~~~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l 246 (468)
.||..++|..|+ ++|+|||+||++++...|..+++.|. ++||+|+++|+||||.|+.+. ..++++++++|+ ..+
T Consensus 6 ~~g~~l~y~~~g-~g~~vvllHG~~~~~~~w~~~~~~l~---~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~~dl-~~~ 79 (274)
T 1a8q_A 6 RDGVEIFYKDWG-QGRPVVFIHGWPLNGDAWQDQLKAVV---DAGYRGIAHDRRGHGHSTPVW-DGYDFDTFADDL-NDL 79 (274)
T ss_dssp TTSCEEEEEEEC-SSSEEEEECCTTCCGGGGHHHHHHHH---HTTCEEEEECCTTSTTSCCCS-SCCSHHHHHHHH-HHH
T ss_pred cCCCEEEEEecC-CCceEEEECCCcchHHHHHHHHHHHH---hCCCeEEEEcCCCCCCCCCCC-CCCcHHHHHHHH-HHH
Confidence 366778888886 56899999999887766666777776 468999999999999998654 358999999999 699
Q ss_pred hcccCCceEEEEEEcccHHHHHHHHHhC-CCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHH
Q 012188 247 IEPNKVKSFHIVAHSLGCILALALAVKH-PGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYE 325 (468)
Q Consensus 247 ~~~l~~~~i~lvGhS~Gg~ial~~a~~~-p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (468)
+++++.++++++||||||.+++.++.++ |++|+++|++++.......... .+. ..+...+.........
T Consensus 80 l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~---------~~~-~~~~~~~~~~~~~~~~ 149 (274)
T 1a8q_A 80 LTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDK---------NPD-GVPDEVFDALKNGVLT 149 (274)
T ss_dssp HHHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSS---------CTT-SBCHHHHHHHHHHHHH
T ss_pred HHHcCCCceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCCCcccccccc---------Ccc-cchHHHHHHHHHHhhc
Confidence 9999999999999999999999988776 9999999999974321100000 000 0000000000000000
Q ss_pred ----HHhhHHHHHhhcc---chhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCC
Q 012188 326 ----HISRTICLLICKN---HRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKC 398 (468)
Q Consensus 326 ----~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 398 (468)
.+........... ....+. ....+...... ............. ........+.++++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~-~~~~~~~~~~~~~-------~~~~~~~~l~~i~~ 213 (274)
T 1a8q_A 150 ERSQFWKDTAEGFFSANRPGNKVTQG--------NKDAFWYMAMA-QTIEGGVRCVDAF-------GYTDFTEDLKKFDI 213 (274)
T ss_dssp HHHHHHHHHHHHHTTTTSTTCCCCHH--------HHHHHHHHHTT-SCHHHHHHHHHHH-------HHCCCHHHHTTCCS
T ss_pred cHHHHHHHhcccccccccccccccHH--------HHHHHHHHhhh-cChHHHHHHHhhh-------hcCcHHHHhhcCCC
Confidence 0000000000000 000000 00000000000 0000000000000 00112234578899
Q ss_pred cEEEEeeCCCCccChh-hHHHHHHhCCCCeEEEecCCCccccccC--cHHHHHHHHHHHHh
Q 012188 399 DVNVFHGEDDELIPVE-CSYNVQRKIPRARVKVIEKKDHITIVVG--RQKTFARELEEIWR 456 (468)
Q Consensus 399 PvLii~G~~D~~vp~~-~~~~l~~~~p~~~l~~i~~~gH~~~~~e--~p~~~~~~i~~fl~ 456 (468)
|+|+|+|++|.++|++ ..+.+.+.+|++++++++++||+++. + +|+++++.|.+||+
T Consensus 214 P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e~~~p~~~~~~i~~fl~ 273 (274)
T 1a8q_A 214 PTLVVHGDDDQVVPIDATGRKSAQIIPNAELKVYEGSSHGIAM-VPGDKEKFNRDLLEFLN 273 (274)
T ss_dssp CEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTTTT-STTHHHHHHHHHHHHHT
T ss_pred CEEEEecCcCCCCCcHHHHHHHHhhCCCceEEEECCCCCceec-ccCCHHHHHHHHHHHhc
Confidence 9999999999999988 45667778899999999999999997 7 99999999999995
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-30 Score=249.87 Aligned_cols=274 Identities=13% Similarity=0.139 Sum_probs=164.4
Q ss_pred CCCceeEEEecCC-CCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 012188 168 DCDCKFCTCWSSS-SRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSV 246 (468)
Q Consensus 168 d~~~~~~~~~~~~-~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l 246 (468)
++..++|..++++ +|+|||+||++++...|..+++.|+ ++|+|+++|+||||.|+.+....|+++++++++ ..+
T Consensus 29 ~g~~l~y~~~G~g~~~~vvllHG~~~~~~~w~~~~~~L~----~~~~via~Dl~GhG~S~~~~~~~~~~~~~a~dl-~~l 103 (318)
T 2psd_A 29 LDSFINYYDSEKHAENAVIFLHGNATSSYLWRHVVPHIE----PVARCIIPDLIGMGKSGKSGNGSYRLLDHYKYL-TAW 103 (318)
T ss_dssp TTEEEEEEECCSCTTSEEEEECCTTCCGGGGTTTGGGTT----TTSEEEEECCTTSTTCCCCTTSCCSHHHHHHHH-HHH
T ss_pred CCeEEEEEEcCCCCCCeEEEECCCCCcHHHHHHHHHHhh----hcCeEEEEeCCCCCCCCCCCCCccCHHHHHHHH-HHH
Confidence 4555777777643 3599999999987776666888887 779999999999999987754558999999999 699
Q ss_pred hcccCC-ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCC---CCCchhhHHHHHhhcCCCCCchhhhhhhhHH
Q 012188 247 IEPNKV-KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPV---PKGAQASQYVMRKVAPRRVWPLIAFGASMAC 322 (468)
Q Consensus 247 ~~~l~~-~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (468)
++.+++ ++++|+||||||.+|+.+|.++|++|+++|++++...+. ....... .....+.... ..........
T Consensus 104 l~~l~~~~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~ 179 (318)
T 2psd_A 104 FELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDEWPDIE-EDIALIKSEE---GEKMVLENNF 179 (318)
T ss_dssp HTTSCCCSSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEEECCSCBSCCTTSCSCH-HHHHHHHSTH---HHHHHTTTCH
T ss_pred HHhcCCCCCeEEEEEChhHHHHHHHHHhChHhhheEEEeccccCCccchhhhhhHH-HHHHHHhccc---chhhhhcchH
Confidence 999999 899999999999999999999999999999998543221 0000000 1111000000 0000000000
Q ss_pred HHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccc-cchhHHhhHhHHHhccc---cc---ccchHHHhhcc
Q 012188 323 WYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCH-THNAAWHTLHNIICGTA---NK---LDGYLDAVRNH 395 (468)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~ 395 (468)
+.. ....... .....+ .....+. ..+... ........+........ .. ........+.+
T Consensus 180 ~~~---~~~~~~~--~~~~~~--------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 245 (318)
T 2psd_A 180 FVE---TVLPSKI--MRKLEP--------EEFAAYL-EPFKEKGEVRRPTLSWPREIPLVKGGKPDVVQIVRNYNAYLRA 245 (318)
T ss_dssp HHH---THHHHTC--SSCCCH--------HHHHHHH-GGGCSSSGGGHHHHHHHHTCCBTTTSCHHHHHHHHHHHHHHHT
T ss_pred HHH---hhccccc--cccCCH--------HHHHHHH-HhhcCccccccchhcccccccccccccchhHHHHHHHHHHhcc
Confidence 000 0000000 000000 0000000 000000 00000000000000000 00 00112234467
Q ss_pred C-CCcEEEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhcCCCCCCCCCC
Q 012188 396 V-KCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSSSGHEPSENHH 468 (468)
Q Consensus 396 i-~~PvLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~~~~~~~~~~ 468 (468)
+ ++|+|+|+|++| ++++ .++.+.+.+|+++++++ ++||+++. |+|++|++.|.+||++....+..+.||
T Consensus 246 i~~~P~Lvi~G~~D-~~~~-~~~~~~~~~~~~~~~~i-~~gH~~~~-e~p~~~~~~i~~fl~~~~~~~~~~~~~ 315 (318)
T 2psd_A 246 SDDLPKLFIESDPG-FFSN-AIVEGAKKFPNTEFVKV-KGLHFLQE-DAPDEMGKYIKSFVERVLKNEQVDHHH 315 (318)
T ss_dssp CTTSCEEEEEEEEC-SSHH-HHHHHHTTSSSEEEEEE-EESSSGGG-TCHHHHHHHHHHHHHHHHC--------
T ss_pred ccCCCeEEEEeccc-cCcH-HHHHHHHhCCCcEEEEe-cCCCCCHh-hCHHHHHHHHHHHHHHhhccccccccc
Confidence 7 999999999999 8888 88899999999999999 68999997 999999999999998876665555444
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.6e-30 Score=242.42 Aligned_cols=260 Identities=20% Similarity=0.223 Sum_probs=163.9
Q ss_pred CCCCceeEEEecC-CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 012188 167 SDCDCKFCTCWSS-SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKS 245 (468)
Q Consensus 167 ~d~~~~~~~~~~~-~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~ 245 (468)
.+|..++|..|++ ++|+|||+||++.+...|..+++.|. ++||+|+++|+||||.|+.+. ..++++++++|+ ..
T Consensus 6 ~~g~~l~y~~~g~~~~~~vvllHG~~~~~~~w~~~~~~l~---~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~~dl-~~ 80 (275)
T 1a88_A 6 SDGTNIFYKDWGPRDGLPVVFHHGWPLSADDWDNQMLFFL---SHGYRVIAHDRRGHGRSDQPS-TGHDMDTYAADV-AA 80 (275)
T ss_dssp TTSCEEEEEEESCTTSCEEEEECCTTCCGGGGHHHHHHHH---HTTCEEEEECCTTSTTSCCCS-SCCSHHHHHHHH-HH
T ss_pred cCCCEEEEEEcCCCCCceEEEECCCCCchhhHHHHHHHHH---HCCceEEEEcCCcCCCCCCCC-CCCCHHHHHHHH-HH
Confidence 4667788888874 57899999999887765666778776 468999999999999998654 358999999999 69
Q ss_pred HhcccCCceEEEEEEcccHHHHHHHHHhC-CCccceEEEecCCCCCCCCCch----hhHHHHHhhcCCCCCchhhhhhhh
Q 012188 246 VIEPNKVKSFHIVAHSLGCILALALAVKH-PGSVKSLTLLAPPYYPVPKGAQ----ASQYVMRKVAPRRVWPLIAFGASM 320 (468)
Q Consensus 246 l~~~l~~~~i~lvGhS~Gg~ial~~a~~~-p~~v~~lVl~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 320 (468)
+++.++.++++++||||||.+++.++.++ |++|+++|++++.......... ........... ......
T Consensus 81 ~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ 153 (275)
T 1a88_A 81 LTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRA-------ALAANR 153 (275)
T ss_dssp HHHHHTCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHH-------HHHHCH
T ss_pred HHHHcCCCceEEEEeccchHHHHHHHHHhCchheEEEEEecCCCcccccCccCcccCCHHHHHHHHH-------HHhhhH
Confidence 99999999999999999999999988886 9999999999974321100000 00000000000 000000
Q ss_pred HHHHHHHhhHHHHHhhcc---chhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCC
Q 012188 321 ACWYEHISRTICLLICKN---HRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVK 397 (468)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 397 (468)
..+...+... ..+... ....+.. ...+...... .........+... ........+.+++
T Consensus 154 ~~~~~~~~~~--~~~~~~~~~~~~~~~~--------~~~~~~~~~~-~~~~~~~~~~~~~-------~~~~~~~~l~~i~ 215 (275)
T 1a88_A 154 AQFYIDVPSG--PFYGFNREGATVSQGL--------IDHWWLQGMM-GAANAHYECIAAF-------SETDFTDDLKRID 215 (275)
T ss_dssp HHHHHHHHHT--TTTTTTSTTCCCCHHH--------HHHHHHHHHH-SCHHHHHHHHHHH-------HHCCCHHHHHHCC
T ss_pred HHHHHhhhcc--ccccccCcccccCHHH--------HHHHHHHhhh-cchHhHHHHHhhh-------hhcccccccccCC
Confidence 0000000000 000000 0000000 0000000000 0000000000000 0011223356789
Q ss_pred CcEEEEeeCCCCccChh-hHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 398 CDVNVFHGEDDELIPVE-CSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 398 ~PvLii~G~~D~~vp~~-~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
+|+|+++|++|.++|++ ..+.+.+.+|++++++++++||+++. ++|+++++.|.+||++
T Consensus 216 ~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~~ 275 (275)
T 1a88_A 216 VPVLVAHGTDDQVVPYADAAPKSAELLANATLKSYEGLPHGMLS-THPEVLNPDLLAFVKS 275 (275)
T ss_dssp SCEEEEEETTCSSSCSTTTHHHHHHHSTTEEEEEETTCCTTHHH-HCHHHHHHHHHHHHHC
T ss_pred CCEEEEecCCCccCCcHHHHHHHHhhCCCcEEEEcCCCCccHHH-hCHHHHHHHHHHHhhC
Confidence 99999999999999988 45667778899999999999999997 8999999999999963
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.1e-31 Score=255.27 Aligned_cols=267 Identities=15% Similarity=0.166 Sum_probs=162.3
Q ss_pred CCCceeEEEecC---C--CCeEEEEecCCCCccchhhhhhhccccCC-CcceEEEECCCCCCCCCCCC--C-CCCCHHHH
Q 012188 168 DCDCKFCTCWSS---S--SRDTLFVKTQGPSAFWTETLFPNFSSASK-STYRLFAIDLLGFGRSPKPT--D-SLYTVREH 238 (468)
Q Consensus 168 d~~~~~~~~~~~---~--~p~vl~lHG~g~s~~~~~~~~~~L~~~~~-~gy~Via~D~~G~G~S~~~~--~-~~~t~~~~ 238 (468)
+|..++|..+++ + ++||||+||++++...|...++.|. + .+|+|+++|+||||.|+... . ..++++++
T Consensus 36 ~g~~l~y~~~G~~~~~~~g~plvllHG~~~~~~~w~~~~~~l~---~~~~~~Via~D~rG~G~S~~~~~~~~~~~~~~~~ 112 (330)
T 3nwo_A 36 GDHETWVQVTTPENAQPHALPLIVLHGGPGMAHNYVANIAALA---DETGRTVIHYDQVGCGNSTHLPDAPADFWTPQLF 112 (330)
T ss_dssp TTEEEEEEEECCSSCCTTCCCEEEECCTTTCCSGGGGGGGGHH---HHHTCCEEEECCTTSTTSCCCTTSCGGGCCHHHH
T ss_pred cCcEEEEEEecCccCCCCCCcEEEECCCCCCchhHHHHHHHhc---cccCcEEEEECCCCCCCCCCCCCCccccccHHHH
Confidence 566688888876 2 4489999998776553334566665 2 48999999999999997632 2 35799999
Q ss_pred HHHHHHHHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhh
Q 012188 239 LDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGA 318 (468)
Q Consensus 239 ~~di~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (468)
++|+ ..+++.+++++++|+||||||.+|+.+|.++|++|.++|+++++.... ........+.. ..+..
T Consensus 113 a~dl-~~ll~~lg~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~~~~~-----~~~~~~~~~~~--~~~~~---- 180 (330)
T 3nwo_A 113 VDEF-HAVCTALGIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMR-----LWSEAAGDLRA--QLPAE---- 180 (330)
T ss_dssp HHHH-HHHHHHHTCCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCCSBHH-----HHHHHHHHHHH--HSCHH----
T ss_pred HHHH-HHHHHHcCCCceEEEecCHHHHHHHHHHHhCCccceEEEEecCCcchH-----HHHHHHHHHHH--hcCHH----
Confidence 9999 699999999999999999999999999999999999999999764220 00000000000 00000
Q ss_pred hhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhh---------HHHHHhhhccccccchhHHhhHhH--HHhcccccccc
Q 012188 319 SMACWYEHISRTICLLICKNHRVWEFLAKLVTRN---------RIRTFLLEGFFCHTHNAAWHTLHN--IICGTANKLDG 387 (468)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 387 (468)
....+.+...................+... ........ ... ....+..+.. ...........
T Consensus 181 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~ 253 (330)
T 3nwo_A 181 ----TRAALDRHEAAGTITHPDYLQAAAEFYRRHVCRVVPTPQDFADSVAQ-MEA--EPTVYHTMNGPNEFHVVGTLGDW 253 (330)
T ss_dssp ----HHHHHHHHHHHTCTTSHHHHHHHHHHHHHHTCCSSSCCHHHHHHHHH-HHH--SCHHHHHHTCSCSSSCCSGGGGC
T ss_pred ----HHHHHHHHHhccCCCCHHHHHHHHHHHHHhhccccCCCHHHHHHHHh-hcc--chhhhhcccCchhhhhhccccCC
Confidence 000000000000000000000000000000 00000000 000 0000000000 00000000111
Q ss_pred hHHHhhccCCCcEEEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 388 YLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 388 ~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
.....+.++++|+|+|+|++|.++| ...+.+.+.+|++++++++++||++++ |+|++|++.|.+||++.
T Consensus 254 ~~~~~l~~i~~P~Lvi~G~~D~~~p-~~~~~~~~~ip~~~~~~i~~~gH~~~~-e~p~~~~~~i~~FL~~~ 322 (330)
T 3nwo_A 254 SVIDRLPDVTAPVLVIAGEHDEATP-KTWQPFVDHIPDVRSHVFPGTSHCTHL-EKPEEFRAVVAQFLHQH 322 (330)
T ss_dssp BCGGGGGGCCSCEEEEEETTCSSCH-HHHHHHHHHCSSEEEEEETTCCTTHHH-HSHHHHHHHHHHHHHHH
T ss_pred chhhhcccCCCCeEEEeeCCCccCh-HHHHHHHHhCCCCcEEEeCCCCCchhh-cCHHHHHHHHHHHHHhc
Confidence 2234457889999999999999876 467888999999999999999999998 99999999999999864
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-29 Score=242.64 Aligned_cols=265 Identities=16% Similarity=0.124 Sum_probs=164.0
Q ss_pred CCCceeEEEecC-CCCeEEEEecCCCCccch-hhhhhhccccCCCcceEEEECCCCCCCCCC--CCCCCCCHHHHHHHHH
Q 012188 168 DCDCKFCTCWSS-SSRDTLFVKTQGPSAFWT-ETLFPNFSSASKSTYRLFAIDLLGFGRSPK--PTDSLYTVREHLDMIE 243 (468)
Q Consensus 168 d~~~~~~~~~~~-~~p~vl~lHG~g~s~~~~-~~~~~~L~~~~~~gy~Via~D~~G~G~S~~--~~~~~~t~~~~~~di~ 243 (468)
||..++|..+++ ++|+|||+||++++...| ..+.+.|+ ++||+|+++|+||||.|+. +....++++++++|+
T Consensus 9 ~g~~l~y~~~G~~~~~~vvllHG~~~~~~~w~~~~~~~L~---~~G~~vi~~D~rG~G~S~~~~~~~~~~~~~~~a~dl- 84 (298)
T 1q0r_A 9 GDVELWSDDFGDPADPALLLVMGGNLSALGWPDEFARRLA---DGGLHVIRYDHRDTGRSTTRDFAAHPYGFGELAADA- 84 (298)
T ss_dssp TTEEEEEEEESCTTSCEEEEECCTTCCGGGSCHHHHHHHH---TTTCEEEEECCTTSTTSCCCCTTTSCCCHHHHHHHH-
T ss_pred CCeEEEEEeccCCCCCeEEEEcCCCCCccchHHHHHHHHH---hCCCEEEeeCCCCCCCCCCCCCCcCCcCHHHHHHHH-
Confidence 566688888874 578999999998876644 43558777 4679999999999999986 333468999999999
Q ss_pred HHHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHH
Q 012188 244 KSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACW 323 (468)
Q Consensus 244 ~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (468)
..+++.+++++++|+||||||.+|+.+|.++|++|+++|++++........ ................+.. ....+...
T Consensus 85 ~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 162 (298)
T 1q0r_A 85 VAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFD-ANIERVMRGEPTLDGLPGP-QQPFLDAL 162 (298)
T ss_dssp HHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHH-HHHHHHHHTCCCSSCSCCC-CHHHHHHH
T ss_pred HHHHHHhCCCceEEEEeCcHHHHHHHHHHhCchhhheeEEecccCCCcccc-cchhhhhhhhhhhcccccc-cHHHHHHH
Confidence 699999999999999999999999999999999999999999765211000 0000000000000000000 00000000
Q ss_pred HH----------HHhhHHH--HHhhc-cchhHHHHHHHHhhhHHHHHhhhccccc-cchhH-HhhHhHHHhcccccccch
Q 012188 324 YE----------HISRTIC--LLICK-NHRVWEFLAKLVTRNRIRTFLLEGFFCH-THNAA-WHTLHNIICGTANKLDGY 388 (468)
Q Consensus 324 ~~----------~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~ 388 (468)
.. ....... ..... .....+ ..........+... ..... ...+ . . .....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~----~-~--~~~~~ 227 (298)
T 1q0r_A 163 ALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDD--------AEYARWEERAIDHAGGVLAEPYAHY----S-L--TLPPP 227 (298)
T ss_dssp HHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCH--------HHHHHHHHHHHHHTTTCCSCCCGGG----G-C--CCCCG
T ss_pred hccCcccccHHHHHHHHHHhhhhccCCCCCCCH--------HHHHHHHHHHhhccCCccchhhhhh----h-h--hcCcc
Confidence 00 0000000 00000 000000 00000000000000 00000 0000 0 0 00112
Q ss_pred HHHh-hccCCCcEEEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 389 LDAV-RNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 389 ~~~~-~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
.... +.++++|+|+|+|++|.++|++.++.+.+.+|++++++++++|| +.|+++++.|.+||++.
T Consensus 228 ~~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~gH-----e~p~~~~~~i~~fl~~~ 293 (298)
T 1q0r_A 228 SRAAELREVTVPTLVIQAEHDPIAPAPHGKHLAGLIPTARLAEIPGMGH-----ALPSSVHGPLAEVILAH 293 (298)
T ss_dssp GGGGGGGGCCSCEEEEEETTCSSSCTTHHHHHHHTSTTEEEEEETTCCS-----SCCGGGHHHHHHHHHHH
T ss_pred cccccccccCCCEEEEEeCCCccCCHHHHHHHHHhCCCCEEEEcCCCCC-----CCcHHHHHHHHHHHHHH
Confidence 3334 67889999999999999999999999999999999999999999 57889999999999764
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-30 Score=244.41 Aligned_cols=260 Identities=15% Similarity=0.123 Sum_probs=157.7
Q ss_pred CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccC-CceEEEE
Q 012188 180 SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNK-VKSFHIV 258 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~-~~~i~lv 258 (468)
++|+|||+||++.+...|..+++.|+ ++||+|+++|+||||.|+.+....++++++++++ ..+++.++ .++++|+
T Consensus 3 ~~~~vvllHG~~~~~~~w~~~~~~L~---~~g~rVia~Dl~G~G~S~~~~~~~~~~~~~a~dl-~~~l~~l~~~~~~~lv 78 (273)
T 1xkl_A 3 EGKHFVLVHGACHGGWSWYKLKPLLE---AAGHKVTALDLAASGTDLRKIEELRTLYDYTLPL-MELMESLSADEKVILV 78 (273)
T ss_dssp CCCEEEEECCTTCCGGGGTTHHHHHH---HTTCEEEECCCTTSTTCCCCGGGCCSHHHHHHHH-HHHHHTSCSSSCEEEE
T ss_pred CCCeEEEECCCCCCcchHHHHHHHHH---hCCCEEEEecCCCCCCCccCcccccCHHHHHHHH-HHHHHHhccCCCEEEE
Confidence 46899999999887765556888885 3689999999999999987554568999999999 69999997 5899999
Q ss_pred EEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchh-hHHHHHhhcCCCCCchhh---hhhh-hHHHHHHHh-hHHH
Q 012188 259 AHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQA-SQYVMRKVAPRRVWPLIA---FGAS-MACWYEHIS-RTIC 332 (468)
Q Consensus 259 GhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~-~~~~ 332 (468)
||||||.+++.+|.++|++|+++|++++........... .......... ..+.... +... ......... ....
T Consensus 79 GhSmGG~va~~~a~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (273)
T 1xkl_A 79 GHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPA-ENWLDTQFLPYGSPEEPLTSMFFGPKFLA 157 (273)
T ss_dssp EETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCT-TTTTTCEEEECSCTTSCCEEEECCHHHHH
T ss_pred ecCHHHHHHHHHHHhChHhheEEEEEeccCCCCCCcHHHHHHHhhccCCh-hhHHHHHHhhccCCCCCccccccCHHHHH
Confidence 999999999999999999999999999753221111110 1111111110 0000000 0000 000000000 0000
Q ss_pred HHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccC
Q 012188 333 LLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIP 412 (468)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp 412 (468)
........ .+ .... ........ ......+ ... .... .. ...++|+++|+|++|.++|
T Consensus 158 ~~~~~~~~-~~----------~~~~-~~~~~~~~-~~~~~~~---~~~--~~~~---~~--~~~~~P~l~i~G~~D~~~p 214 (273)
T 1xkl_A 158 HKLYQLCS-PE----------DLAL-ASSLVRPS-SLFMEDL---SKA--KYFT---DE--RFGSVKRVYIVCTEDKGIP 214 (273)
T ss_dssp HHTSTTSC-HH----------HHHH-HHHHCCCB-CCCHHHH---HHC--CCCC---TT--TGGGSCEEEEEETTCTTTT
T ss_pred HHhhccCC-HH----------HHHH-HHHhcCCC-chhhhhh---hcc--cccc---hh--hhCCCCeEEEEeCCccCCC
Confidence 00000000 00 0000 00000000 0000000 000 0000 00 1136899999999999999
Q ss_pred hhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhcCCC-CCCCCCC
Q 012188 413 VECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSSSGH-EPSENHH 468 (468)
Q Consensus 413 ~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~~~-~~~~~~~ 468 (468)
++.++.+.+.+|++++++++++||++++ |+|++|++.|.+|+++.... .|.+.||
T Consensus 215 ~~~~~~~~~~~p~~~~~~i~~aGH~~~~-e~P~~~~~~i~~fl~~~~~~~~~~~~~~ 270 (273)
T 1xkl_A 215 EEFQRWQIDNIGVTEAIEIKGADHMAML-CEPQKLCASLLEIAHKYNMAGDPLEHHH 270 (273)
T ss_dssp HHHHHHHHHHHCCSEEEEETTCCSCHHH-HSHHHHHHHHHHHHHHCC----------
T ss_pred HHHHHHHHHhCCCCeEEEeCCCCCCchh-cCHHHHHHHHHHHHHHhccCCCcchhcc
Confidence 9999999999999999999999999998 99999999999999886554 4555544
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.6e-30 Score=241.65 Aligned_cols=256 Identities=13% Similarity=0.208 Sum_probs=163.7
Q ss_pred CceeEEEecCCCCeEEEEecCC---CCccchhhhh-hhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 012188 170 DCKFCTCWSSSSRDTLFVKTQG---PSAFWTETLF-PNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKS 245 (468)
Q Consensus 170 ~~~~~~~~~~~~p~vl~lHG~g---~s~~~~~~~~-~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~ 245 (468)
..++|..++++.++|||+||++ .+...|..++ +.|. ++|+|+++|+||||.|+.+....++++++++++ ..
T Consensus 25 ~~l~y~~~g~g~~~vvllHG~~~~~~~~~~~~~~~~~~l~----~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l-~~ 99 (289)
T 1u2e_A 25 LRIHFNDCGQGDETVVLLHGSGPGATGWANFSRNIDPLVE----AGYRVILLDCPGWGKSDSVVNSGSRSDLNARIL-KS 99 (289)
T ss_dssp EEEEEEEECCCSSEEEEECCCSTTCCHHHHTTTTHHHHHH----TTCEEEEECCTTSTTSCCCCCSSCHHHHHHHHH-HH
T ss_pred EEEEEeccCCCCceEEEECCCCcccchhHHHHHhhhHHHh----cCCeEEEEcCCCCCCCCCCCccccCHHHHHHHH-HH
Confidence 4577777765434999999986 4333333456 7776 679999999999999987765468999999999 69
Q ss_pred HhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCc----hhhHHHHHhhcCCCCCchhhhhhhhH
Q 012188 246 VIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGA----QASQYVMRKVAPRRVWPLIAFGASMA 321 (468)
Q Consensus 246 l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (468)
++++++.++++|+||||||.+|+.+|.++|++|+++|++++......... ............ +..
T Consensus 100 ~l~~l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~------- 168 (289)
T 1u2e_A 100 VVDQLDIAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQ----PTI------- 168 (289)
T ss_dssp HHHHTTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHS----CCH-------
T ss_pred HHHHhCCCceEEEEECHhHHHHHHHHHHCHHhhhEEEEECCCccccccccccchhhHHHHHHHHhc----chH-------
Confidence 99999999999999999999999999999999999999998653211110 001111110000 000
Q ss_pred HHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEE
Q 012188 322 CWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVN 401 (468)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvL 401 (468)
..+...............+..... ...... . .......+...+...... .......+.++++|+|
T Consensus 169 ---~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-----~--~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~P~l 233 (289)
T 1u2e_A 169 ---ENLKLMMDIFVFDTSDLTDALFEA----RLNNML-----S--RRDHLENFVKSLEANPKQ-FPDFGPRLAEIKAQTL 233 (289)
T ss_dssp ---HHHHHHHHTTSSCTTSCCHHHHHH----HHHHHH-----H--THHHHHHHHHHHHHCSCC-SCCCGGGGGGCCSCEE
T ss_pred ---HHHHHHHHHhhcCcccCCHHHHHH----HHHHhh-----c--ChhHHHHHHHHHHhcccc-ccchhhHHhhcCCCeE
Confidence 000000000000000000000000 000000 0 000000000000000000 0012233578899999
Q ss_pred EEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 402 VFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 402 ii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
+|+|++|.++|++.++.+.+.+|++++++++++||+++. |+|+++++.|.+||++
T Consensus 234 ii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 288 (289)
T 1u2e_A 234 IVWGRNDRFVPMDAGLRLLSGIAGSELHIFRDCGHWAQW-EHADAFNQLVLNFLAR 288 (289)
T ss_dssp EEEETTCSSSCTHHHHHHHHHSTTCEEEEESSCCSCHHH-HTHHHHHHHHHHHHTC
T ss_pred EEeeCCCCccCHHHHHHHHhhCCCcEEEEeCCCCCchhh-cCHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999998 8999999999999964
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.9e-30 Score=242.51 Aligned_cols=266 Identities=12% Similarity=0.154 Sum_probs=164.8
Q ss_pred CCCCceeEEEecCC--CCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCC-CCCCCHHHHHHHHH
Q 012188 167 SDCDCKFCTCWSSS--SRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPT-DSLYTVREHLDMIE 243 (468)
Q Consensus 167 ~d~~~~~~~~~~~~--~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~-~~~~t~~~~~~di~ 243 (468)
.++..++|..++++ +|+|||+||++++...|..+++.|+ ++|+|+++|+||||.|+.+. ...++++++++|+
T Consensus 13 ~~g~~l~~~~~g~~~~~~~vvllHG~~~~~~~~~~~~~~L~----~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl- 87 (285)
T 3bwx_A 13 SDGLRLHFRAYEGDISRPPVLCLPGLTRNARDFEDLATRLA----GDWRVLCPEMRGRGDSDYAKDPMTYQPMQYLQDL- 87 (285)
T ss_dssp TTSCEEEEEEECBCTTSCCEEEECCTTCCGGGGHHHHHHHB----BTBCEEEECCTTBTTSCCCSSGGGCSHHHHHHHH-
T ss_pred CCCceEEEEEcCCCCCCCcEEEECCCCcchhhHHHHHHHhh----cCCEEEeecCCCCCCCCCCCCccccCHHHHHHHH-
Confidence 36667888888754 7899999999987776667888888 69999999999999998764 2458999999999
Q ss_pred HHHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHH
Q 012188 244 KSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACW 323 (468)
Q Consensus 244 ~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (468)
..+++.+++++++|+||||||.+|+.+|.++|++|+++|++++.....+ .................. ....
T Consensus 88 ~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~---~~~~~~~~~~~~~~~~~~------~~~~ 158 (285)
T 3bwx_A 88 EALLAQEGIERFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGPEVSP---EGLERIRGYVGQGRNFET------WMHA 158 (285)
T ss_dssp HHHHHHHTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCH---HHHHHHHHHTTCCCEESS------HHHH
T ss_pred HHHHHhcCCCceEEEEeCHHHHHHHHHHHhCchheeEEEEecCCcccCc---chhHHHHHHhcCCccccc------HHHH
Confidence 6999999999999999999999999999999999999999875322111 011111111111000000 0000
Q ss_pred HHHHhhHHHHHhhc-cchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcc-cccccchHHHhhccC-CCcE
Q 012188 324 YEHISRTICLLICK-NHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGT-ANKLDGYLDAVRNHV-KCDV 400 (468)
Q Consensus 324 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i-~~Pv 400 (468)
...+.......+.. ....+..... ..+... ............ ....+... ...........+.++ ++|+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 230 (285)
T 3bwx_A 159 ARALQESSGDVYPDWDITQWLRYAK----RIMVLG-SSGRIAFDYDMK---IAEPFEAPVGATPQVDMWPLFDALATRPL 230 (285)
T ss_dssp HHHHHHHHTTTSTTCCHHHHHHHHH----HHEEEC-TTSCEEESBCGG---GGCCTTSCTTCCCSSCCHHHHHHHTTSCE
T ss_pred HHHHHHhhhhcccccChHHHHHHHH----hhheeC-CCCceeeccCHH---HHHHHhhhhhccccchhhHHHHHccCCCe
Confidence 00000000000000 0000000000 000000 000000000000 00000000 000011111222344 7999
Q ss_pred EEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 401 NVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 401 Lii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
|+|+|++|.++|++.++.+.+. |++++++++++||+++. |+|+.+ +.|.+||++
T Consensus 231 lii~G~~D~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~-e~p~~~-~~i~~fl~~ 284 (285)
T 3bwx_A 231 LVLRGETSDILSAQTAAKMASR-PGVELVTLPRIGHAPTL-DEPESI-AAIGRLLER 284 (285)
T ss_dssp EEEEETTCSSSCHHHHHHHHTS-TTEEEEEETTCCSCCCS-CSHHHH-HHHHHHHTT
T ss_pred EEEEeCCCCccCHHHHHHHHhC-CCcEEEEeCCCCccchh-hCchHH-HHHHHHHHh
Confidence 9999999999999999999999 99999999999999997 899987 579999964
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-30 Score=245.15 Aligned_cols=260 Identities=15% Similarity=0.127 Sum_probs=164.5
Q ss_pred CCCceeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHh
Q 012188 168 DCDCKFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVI 247 (468)
Q Consensus 168 d~~~~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~ 247 (468)
++..++|..++ ++++|||+||++++...|..+++.|. ++||+|+++|+||||.|+.+. ..++++++++|+ ..++
T Consensus 11 ~g~~l~y~~~g-~~~pvvllHG~~~~~~~~~~~~~~L~---~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~~dl-~~~l 84 (279)
T 1hkh_A 11 TPIELYYEDQG-SGQPVVLIHGYPLDGHSWERQTRELL---AQGYRVITYDRRGFGGSSKVN-TGYDYDTFAADL-HTVL 84 (279)
T ss_dssp EEEEEEEEEES-SSEEEEEECCTTCCGGGGHHHHHHHH---HTTEEEEEECCTTSTTSCCCS-SCCSHHHHHHHH-HHHH
T ss_pred CCeEEEEEecC-CCCcEEEEcCCCchhhHHhhhHHHHH---hCCcEEEEeCCCCCCCCCCCC-CCCCHHHHHHHH-HHHH
Confidence 45567777776 46789999999987776666888886 368999999999999998765 458999999999 6999
Q ss_pred cccCCceEEEEEEcccHHHHHHHHHhCCC-ccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHH--
Q 012188 248 EPNKVKSFHIVAHSLGCILALALAVKHPG-SVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWY-- 324 (468)
Q Consensus 248 ~~l~~~~i~lvGhS~Gg~ial~~a~~~p~-~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 324 (468)
++++.++++|+||||||.+++.+|.++|+ +|+++|++++........... +. ..+...+........
T Consensus 85 ~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~---------~~-~~~~~~~~~~~~~~~~~ 154 (279)
T 1hkh_A 85 ETLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDN---------PE-GVPQEVFDGIEAAAKGD 154 (279)
T ss_dssp HHHTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTB---------TT-SBCHHHHHHHHHHHHHC
T ss_pred HhcCCCceEEEEeChhHHHHHHHHHHcCccceeeEEEEccCCcccccCcCC---------cC-CCcHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999 999999999743211000000 00 000000000000000
Q ss_pred --HHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccC---CCc
Q 012188 325 --EHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHV---KCD 399 (468)
Q Consensus 325 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i---~~P 399 (468)
..+.......+... ..............+... ............... + .......+.++ ++|
T Consensus 155 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~-------~~~~~~~l~~i~~~~~P 221 (279)
T 1hkh_A 155 RFAWFTDFYKNFYNLD----ENLGSRISEQAVTGSWNV-AIGSAPVAAYAVVPA-W-------IEDFRSDVEAVRAAGKP 221 (279)
T ss_dssp HHHHHHHHHHHHHTHH----HHBTTTBCHHHHHHHHHH-HHTSCTTHHHHTHHH-H-------TCBCHHHHHHHHHHCCC
T ss_pred hhhhHHHHHhhhhhcc----cCCcccccHHHHHhhhhh-hccCcHHHHHHHHHH-H-------hhchhhhHHHhccCCCC
Confidence 00000000000000 000000000000000000 000000000000000 0 01112234566 999
Q ss_pred EEEEeeCCCCccChhhH-HHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 400 VNVFHGEDDELIPVECS-YNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 400 vLii~G~~D~~vp~~~~-~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
+|+|+|++|.++|++.+ +.+.+.+|++++++++++||+++. ++|+++++.|.+||++
T Consensus 222 ~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 279 (279)
T 1hkh_A 222 TLILHGTKDNILPIDATARRFHQAVPEADYVEVEGAPHGLLW-THADEVNAALKTFLAK 279 (279)
T ss_dssp EEEEEETTCSSSCTTTTHHHHHHHCTTSEEEEETTCCTTHHH-HTHHHHHHHHHHHHHC
T ss_pred EEEEEcCCCccCChHHHHHHHHHhCCCeeEEEeCCCCccchh-cCHHHHHHHHHHHhhC
Confidence 99999999999999887 899999999999999999999997 8999999999999963
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-30 Score=242.31 Aligned_cols=260 Identities=14% Similarity=0.123 Sum_probs=168.6
Q ss_pred CCCceeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCC-CCCCHHHHHHHHHHHH
Q 012188 168 DCDCKFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD-SLYTVREHLDMIEKSV 246 (468)
Q Consensus 168 d~~~~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~-~~~t~~~~~~di~~~l 246 (468)
++..++|..++ ++|+|||+||++++...+..+.+.|+ +||+|+++|+||||.|+.+.. ..++++++++++ ..+
T Consensus 11 ~~~~~~y~~~g-~~~~vv~~HG~~~~~~~~~~~~~~L~----~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~-~~~ 84 (278)
T 3oos_A 11 PRGKFEYFLKG-EGPPLCVTHLYSEYNDNGNTFANPFT----DHYSVYLVNLKGCGNSDSAKNDSEYSMTETIKDL-EAI 84 (278)
T ss_dssp TTEEEEEEEEC-SSSEEEECCSSEECCTTCCTTTGGGG----GTSEEEEECCTTSTTSCCCSSGGGGSHHHHHHHH-HHH
T ss_pred CCceEEEEecC-CCCeEEEEcCCCcchHHHHHHHHHhh----cCceEEEEcCCCCCCCCCCCCcccCcHHHHHHHH-HHH
Confidence 34456776655 67899999999887665666788887 699999999999999987753 567999999999 699
Q ss_pred hcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCch-hhhhhhhHHHHH
Q 012188 247 IEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPL-IAFGASMACWYE 325 (468)
Q Consensus 247 ~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 325 (468)
++.++.++++++||||||.+++.+|.++|++|+++|+++++....... .....+.. ............
T Consensus 85 ~~~l~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~ 153 (278)
T 3oos_A 85 REALYINKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYAS-----------HKDSIYCSKNVKFNRIVSIMN 153 (278)
T ss_dssp HHHTTCSCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBGGGGG-----------STTSTTSTTSTTHHHHHHHHH
T ss_pred HHHhCCCeEEEEeecccHHHHHHHHHhCchhhCeEEEecCcccccccc-----------ccchhhhhhchhHHHHHHHHH
Confidence 999999999999999999999999999999999999999876510000 00000000 000000000000
Q ss_pred HHhhHHHHHhhccchhHHHHHHH------HhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCc
Q 012188 326 HISRTICLLICKNHRVWEFLAKL------VTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCD 399 (468)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 399 (468)
.+.... ............ ........+................+.. . ..........+.++++|
T Consensus 154 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~i~~P 223 (278)
T 3oos_A 154 ALNDDS-----TVQEERKALSREWALMSFYSEEKLEEALKLPNSGKTVGNRLNYFRQ---V--EYKDYDVRQKLKFVKIP 223 (278)
T ss_dssp HHTCTT-----SCHHHHHHHHHHHHHHHCSCHHHHHHHTTSCCCCEECHHHHHHHHH---T--TGGGCBCHHHHTTCCSC
T ss_pred hhcccc-----cCchHHHHHHHHHhhcccCCcHHHHHHhhccccchhHHHHHHHhhh---c--ccccccHHHHHhCCCCC
Confidence 000000 000000000000 0011111111111100000011111110 0 01112223445788999
Q ss_pred EEEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHH
Q 012188 400 VNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIW 455 (468)
Q Consensus 400 vLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl 455 (468)
+++++|++|.++|++.++.+.+.+|++++++++++||+++. ++|+++++.|.+||
T Consensus 224 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~p~~~~~~i~~fl 278 (278)
T 3oos_A 224 SFIYCGKHDVQCPYIFSCEIANLIPNATLTKFEESNHNPFV-EEIDKFNQFVNDTL 278 (278)
T ss_dssp EEEEEETTCSSSCHHHHHHHHHHSTTEEEEEETTCSSCHHH-HSHHHHHHHHHHTC
T ss_pred EEEEEeccCCCCCHHHHHHHHhhCCCcEEEEcCCcCCCccc-ccHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999997 89999999999985
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.5e-30 Score=244.04 Aligned_cols=263 Identities=14% Similarity=0.193 Sum_probs=173.6
Q ss_pred CCCceeEEEecCCCCeEEEEecCCCCccchhhhhhh-ccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 012188 168 DCDCKFCTCWSSSSRDTLFVKTQGPSAFWTETLFPN-FSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSV 246 (468)
Q Consensus 168 d~~~~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~-L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l 246 (468)
++..++|..+++ +|+|||+||++++...+..+.+. +. +||+|+++|+||||.|+.+.. .++++++++++ ..+
T Consensus 17 ~g~~l~~~~~g~-~~~vv~~HG~~~~~~~~~~~~~~l~~----~g~~v~~~d~~G~G~S~~~~~-~~~~~~~~~~~-~~~ 89 (309)
T 3u1t_A 17 EGATIAYVDEGS-GQPVLFLHGNPTSSYLWRNIIPYVVA----AGYRAVAPDLIGMGDSAKPDI-EYRLQDHVAYM-DGF 89 (309)
T ss_dssp TTEEEEEEEEEC-SSEEEEECCTTCCGGGGTTTHHHHHH----TTCEEEEECCTTSTTSCCCSS-CCCHHHHHHHH-HHH
T ss_pred CCeEEEEEEcCC-CCEEEEECCCcchhhhHHHHHHHHHh----CCCEEEEEccCCCCCCCCCCc-ccCHHHHHHHH-HHH
Confidence 566678888765 78999999999877766667777 55 899999999999999987664 68999999999 699
Q ss_pred hcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCC---Cchhh---HHHHHhhcCCCCCchhhhhhhh
Q 012188 247 IEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPK---GAQAS---QYVMRKVAPRRVWPLIAFGASM 320 (468)
Q Consensus 247 ~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 320 (468)
+++++.++++|+||||||.+++.+|.++|++|+++|+++++...... ..... ........... .
T Consensus 90 ~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~------ 159 (309)
T 3u1t_A 90 IDALGLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEAMGPQLGPLFRDLRTAD----V------ 159 (309)
T ss_dssp HHHHTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCTTTCSBSCSGGGHHHHHHHHHHHTSTT----H------
T ss_pred HHHcCCCceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCCCccccccccccchhhhHHHHHHhccc----h------
Confidence 99999999999999999999999999999999999999977654311 10000 01111100000 0
Q ss_pred HHHHHHHhhHHHHHhhccchhHHHHHHH------HhhhHHHHHhhhccccccchhHHhhHhHHHhcccc--------ccc
Q 012188 321 ACWYEHISRTICLLICKNHRVWEFLAKL------VTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTAN--------KLD 386 (468)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~ 386 (468)
..........+....... +.......+. ..+..... ............. ...
T Consensus 160 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 225 (309)
T 3u1t_A 160 ----------GEKMVLDGNFFVETILPEMGVVRSLSEAEMAAYR-APFPTRQS---RLPTLQWPREVPIGGEPAFAEAEV 225 (309)
T ss_dssp ----------HHHHHTTTCHHHHTHHHHTSCSSCCCHHHHHHHH-TTCCSTGG---GHHHHHHHHHSCBTTBSHHHHHHH
T ss_pred ----------hhhhccccceehhhhcccccccccCCHHHHHHHH-HhcCCccc---cchHHHHHHHhccccccchhhhhh
Confidence 000000000000000000 0000000000 00000000 0000000000000 000
Q ss_pred chHHHhhccCCCcEEEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhcCCCC
Q 012188 387 GYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSSSGHE 462 (468)
Q Consensus 387 ~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~~~~ 462 (468)
......+.++++|+++|+|++|.++|.+.++.+.+.+|+.++++++++||+++. ++|+++++.|.+||++.....
T Consensus 226 ~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~p~~~~~~i~~fl~~~~~~~ 300 (309)
T 3u1t_A 226 LKNGEWLMASPIPKLLFHAEPGALAPKPVVDYLSENVPNLEVRFVGAGTHFLQE-DHPHLIGQGIADWLRRNKPHA 300 (309)
T ss_dssp HHHHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHSTTEEEEEEEEESSCHHH-HCHHHHHHHHHHHHHHHCCCC
T ss_pred hhhhhhcccCCCCEEEEecCCCCCCCHHHHHHHHhhCCCCEEEEecCCcccchh-hCHHHHHHHHHHHHHhcchhh
Confidence 122334578899999999999999999999999999999999999999999997 899999999999999875543
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.6e-30 Score=241.65 Aligned_cols=242 Identities=14% Similarity=0.147 Sum_probs=155.3
Q ss_pred CCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccC-CceEEE
Q 012188 179 SSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNK-VKSFHI 257 (468)
Q Consensus 179 ~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~-~~~i~l 257 (468)
+++|+|||+||++.+...|..+++.|+ ++||+|+++|+||||.|+.+....++++++++++ ..++++++ .++++|
T Consensus 8 ~~g~~vvllHG~~~~~~~w~~~~~~L~---~~g~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl-~~~l~~l~~~~~~~l 83 (264)
T 2wfl_A 8 KQQKHFVLVHGGCLGAWIWYKLKPLLE---SAGHKVTAVDLSAAGINPRRLDEIHTFRDYSEPL-MEVMASIPPDEKVVL 83 (264)
T ss_dssp -CCCEEEEECCTTCCGGGGTTHHHHHH---HTTCEEEEECCTTSTTCSCCGGGCCSHHHHHHHH-HHHHHHSCTTCCEEE
T ss_pred CCCCeEEEECCCccccchHHHHHHHHH---hCCCEEEEeecCCCCCCCCCcccccCHHHHHHHH-HHHHHHhCCCCCeEE
Confidence 357899999999887765556888885 3689999999999999986554458999999999 69999997 589999
Q ss_pred EEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchh-hHHHHHhhcCCCCCchhh---hh---------hhhHHHH
Q 012188 258 VAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQA-SQYVMRKVAPRRVWPLIA---FG---------ASMACWY 324 (468)
Q Consensus 258 vGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~---------~~~~~~~ 324 (468)
+||||||.+++.+|.++|++|+++|++++........... ........... .+.... +. .....+.
T Consensus 84 vGhSmGG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (264)
T 2wfl_A 84 LGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPAD-MMLDSQFSTYGNPENPGMSMILGPQFM 162 (264)
T ss_dssp EEETTHHHHHHHHHHHCGGGEEEEEEESSCCCCTTSCTTHHHHHHHHHSCTT-TTTTCEEEEESCTTSCEEEEECCHHHH
T ss_pred EEeChHHHHHHHHHHhChhhhceeEEEeeccCCCCcchhhHHHHhhhcCcch-hhhhhhhhhccCCCCCcchhhhhHHHH
Confidence 9999999999999999999999999999753221111100 11111111100 000000 00 0000000
Q ss_pred HHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEe
Q 012188 325 EHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFH 404 (468)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~ 404 (468)
. . ....... .+ . ... ...... ....... . +... .... .. ...++|+++|+
T Consensus 163 ~---~----~~~~~~~-~~---------~-~~~-~~~~~~-~~~~~~~---~-~~~~-~~~~---~~--~~~~~P~l~i~ 212 (264)
T 2wfl_A 163 A---L----KMFQNCS-VE---------D-LEL-AKMLTR-PGSLFFQ---D-LAKA-KKFS---TE--RYGSVKRAYIF 212 (264)
T ss_dssp H---H----HTSTTSC-HH---------H-HHH-HHHHCC-CEECCHH---H-HTTS-CCCC---TT--TGGGSCEEEEE
T ss_pred H---H----HHhcCCC-HH---------H-HHH-HHhccC-CCccccc---c-cccc-cccC---hH--HhCCCCeEEEE
Confidence 0 0 0000000 00 0 000 000000 0000000 0 0000 0000 00 11268999999
Q ss_pred eCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHh
Q 012188 405 GEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWR 456 (468)
Q Consensus 405 G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~ 456 (468)
|++|.++|++.++.+.+.+|++++++++++||++++ |+|++|++.|.+|++
T Consensus 213 G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~-e~P~~~~~~l~~f~~ 263 (264)
T 2wfl_A 213 CNEDKSFPVEFQKWFVESVGADKVKEIKEADHMGML-SQPREVCKCLLDISD 263 (264)
T ss_dssp ETTCSSSCHHHHHHHHHHHCCSEEEEETTCCSCHHH-HSHHHHHHHHHHHHC
T ss_pred eCCcCCCCHHHHHHHHHhCCCceEEEeCCCCCchhh-cCHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999998 999999999999985
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-30 Score=245.22 Aligned_cols=269 Identities=13% Similarity=0.112 Sum_probs=168.6
Q ss_pred CCCceeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHh
Q 012188 168 DCDCKFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVI 247 (468)
Q Consensus 168 d~~~~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~ 247 (468)
++..++|+.++ ++|+|||+||++++...|..+++.|. +.|+|+++|+||||.|+.+. ..++++++++++ ..++
T Consensus 18 ~g~~l~~~~~g-~~~~vv~lHG~~~~~~~~~~~~~~L~----~~~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~l-~~~l 90 (301)
T 3kda_A 18 DGVKLHYVKGG-QGPLVMLVHGFGQTWYEWHQLMPELA----KRFTVIAPDLPGLGQSEPPK-TGYSGEQVAVYL-HKLA 90 (301)
T ss_dssp TTEEEEEEEEE-SSSEEEEECCTTCCGGGGTTTHHHHT----TTSEEEEECCTTSTTCCCCS-SCSSHHHHHHHH-HHHH
T ss_pred CCeEEEEEEcC-CCCEEEEECCCCcchhHHHHHHHHHH----hcCeEEEEcCCCCCCCCCCC-CCccHHHHHHHH-HHHH
Confidence 56678888877 78899999999988776667888887 55999999999999998773 468999999999 6999
Q ss_pred cccCCce-EEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhh--hhhHHHH
Q 012188 248 EPNKVKS-FHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFG--ASMACWY 324 (468)
Q Consensus 248 ~~l~~~~-i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 324 (468)
++++.++ ++++||||||.+++.+|.++|++|+++|+++++........... .........|...... .......
T Consensus 91 ~~l~~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (301)
T 3kda_A 91 RQFSPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRFPA---FTAQGESLVWHFSFFAADDRLAETL 167 (301)
T ss_dssp HHHCSSSCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSCCSSGGGGGSBS---EETTEECSSTHHHHHHCSTTHHHHH
T ss_pred HHcCCCccEEEEEeCccHHHHHHHHHhChhhccEEEEEccCCCCCCccchhh---hcchhhhhhhhHHHhhcCcchHHHH
Confidence 9999888 99999999999999999999999999999998653311110000 0000000000000000 0000000
Q ss_pred ------HHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchH--HHhhccC
Q 012188 325 ------EHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYL--DAVRNHV 396 (468)
Q Consensus 325 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i 396 (468)
..+...............+....... ..+.. ..........+........... ...+.++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 235 (301)
T 3kda_A 168 IAGKERFFLEHFIKSHASNTEVFSERLLDLYA---------RSYAK---PHSLNASFEYYRALNESVRQNAELAKTRLQM 235 (301)
T ss_dssp HTTCHHHHHHHHHHHTCSSGGGSCHHHHHHHH---------HHHTS---HHHHHHHHHHHHTHHHHHHHHHHHTTSCBCS
T ss_pred hccchHHHHHHHHHhccCCcccCCHHHHHHHH---------HHhcc---ccccchHHHHHHhhccchhhcccchhhcccc
Confidence 00000000000000000000000000 00000 0000000001100000000011 1112388
Q ss_pred CCcEEEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhcCCC
Q 012188 397 KCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSSSGH 461 (468)
Q Consensus 397 ~~PvLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~~~ 461 (468)
++|+++++|++| ++.+..+.+.+.+|++++++++++||+++. ++|+++++.|.+|+++....
T Consensus 236 ~~P~l~i~G~~D--~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~~l~~~~~~ 297 (301)
T 3kda_A 236 PTMTLAGGGAGG--MGTFQLEQMKAYAEDVEGHVLPGCGHWLPE-ECAAPMNRLVIDFLSRGRHH 297 (301)
T ss_dssp CEEEEEECSTTS--CTTHHHHHHHTTBSSEEEEEETTCCSCHHH-HTHHHHHHHHHHHHTTSCCC
T ss_pred CcceEEEecCCC--CChhHHHHHHhhcccCeEEEcCCCCcCchh-hCHHHHHHHHHHHHhhCchh
Confidence 999999999999 778888999999999999999999999998 99999999999999886544
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-29 Score=235.83 Aligned_cols=253 Identities=8% Similarity=0.068 Sum_probs=168.6
Q ss_pred CCCceeEEEecC-CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 012188 168 DCDCKFCTCWSS-SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSV 246 (468)
Q Consensus 168 d~~~~~~~~~~~-~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l 246 (468)
++..++|..+++ ++|+|||+||++++...|..+++.|+ ++|+|+++|+||||.|+.+. ..++++++++++ ..+
T Consensus 7 ~g~~l~~~~~g~~~~~~vv~lHG~~~~~~~~~~~~~~L~----~~~~v~~~D~~G~G~S~~~~-~~~~~~~~~~~~-~~~ 80 (264)
T 3ibt_A 7 NGTLMTYSESGDPHAPTLFLLSGWCQDHRLFKNLAPLLA----RDFHVICPDWRGHDAKQTDS-GDFDSQTLAQDL-LAF 80 (264)
T ss_dssp TTEECCEEEESCSSSCEEEEECCTTCCGGGGTTHHHHHT----TTSEEEEECCTTCSTTCCCC-SCCCHHHHHHHH-HHH
T ss_pred CCeEEEEEEeCCCCCCeEEEEcCCCCcHhHHHHHHHHHH----hcCcEEEEccccCCCCCCCc-cccCHHHHHHHH-HHH
Confidence 556678888876 57899999999988877777888887 78999999999999998763 568999999999 699
Q ss_pred hcccCCceEEEEEEcccHHHHHHHHHhC-CCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHH
Q 012188 247 IEPNKVKSFHIVAHSLGCILALALAVKH-PGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYE 325 (468)
Q Consensus 247 ~~~l~~~~i~lvGhS~Gg~ial~~a~~~-p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (468)
+++++.++++++||||||.+++.+|.++ |++|+++|++++.. . . . ...............+ ..
T Consensus 81 l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~-~-~-~-~~~~~~~~~~~~~~~~------------~~ 144 (264)
T 3ibt_A 81 IDAKGIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLL-Q-P-H-PGFWQQLAEGQHPTEY------------VA 144 (264)
T ss_dssp HHHTTCCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCS-S-C-C-HHHHHHHHHTTCTTTH------------HH
T ss_pred HHhcCCCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCC-C-c-C-hhhcchhhcccChhhH------------HH
Confidence 9999999999999999999999999999 99999999999877 1 1 1 1111112221111100 00
Q ss_pred HHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEee
Q 012188 326 HISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHG 405 (468)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G 405 (468)
.........+... ........+...+.. .....+......+....... ......+.++++|+++++|
T Consensus 145 ~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~P~lii~g 211 (264)
T 3ibt_A 145 GRQSFFDEWAETT-----------DNADVLNHLRNEMPW-FHGEMWQRACREIEANYRTW-GSPLDRMDSLPQKPEICHI 211 (264)
T ss_dssp HHHHHHHHHHTTC-----------CCHHHHHHHHHTGGG-SCHHHHHHHHHHHHHHHHHH-SSHHHHHHTCSSCCEEEEE
T ss_pred HHHHHHHHhcccC-----------CcHHHHHHHHHhhhh-ccchhHHHHHHHhccchhhc-cchhhcccccCCCeEEEEe
Confidence 0000000000000 000001111111110 00111111111110000000 1122445788999999976
Q ss_pred --CCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHh
Q 012188 406 --EDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWR 456 (468)
Q Consensus 406 --~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~ 456 (468)
+.|...+.+..+.+.+.+|++++++++++||+++. ++|+++++.|.+||+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~ 263 (264)
T 3ibt_A 212 YSQPLSQDYRQLQLEFAAGHSWFHPRHIPGRTHFPSL-ENPVAVAQAIREFLQ 263 (264)
T ss_dssp ECCSCCHHHHHHHHHHHHHCTTEEEEECCCSSSCHHH-HCHHHHHHHHHHHTC
T ss_pred cCCccchhhHHHHHHHHHhCCCceEEEcCCCCCcchh-hCHHHHHHHHHHHHh
Confidence 45555567778899999999999999999999997 999999999999986
|
| >4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-29 Score=236.64 Aligned_cols=249 Identities=12% Similarity=0.162 Sum_probs=165.4
Q ss_pred eeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCC---CCCCCCCHHHHHHHHHHHHhc
Q 012188 172 KFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPK---PTDSLYTVREHLDMIEKSVIE 248 (468)
Q Consensus 172 ~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~---~~~~~~t~~~~~~di~~~l~~ 248 (468)
++|..+++++|+|||+||++++...+..+.+.|. +||+|+++|+||||.|+. .....++++++++++ ..+++
T Consensus 11 l~~~~~g~~~p~vv~~HG~~~~~~~~~~~~~~l~----~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~-~~~~~ 85 (269)
T 4dnp_A 11 LNVRVVGSGERVLVLAHGFGTDQSAWNRILPFFL----RDYRVVLYDLVCAGSVNPDFFDFRRYTTLDPYVDDL-LHILD 85 (269)
T ss_dssp TTCEEECSCSSEEEEECCTTCCGGGGTTTGGGGT----TTCEEEEECCTTSTTSCGGGCCTTTCSSSHHHHHHH-HHHHH
T ss_pred hhhhhcCCCCCEEEEEeCCCCcHHHHHHHHHHHh----CCcEEEEEcCCCCCCCCCCCCCccccCcHHHHHHHH-HHHHH
Confidence 4556667777899999999988776667888877 699999999999999965 233445999999999 69999
Q ss_pred ccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHh
Q 012188 249 PNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHIS 328 (468)
Q Consensus 249 ~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (468)
.++.++++++||||||.+|+.+|.++|++|+++|++++........... ..+.................
T Consensus 86 ~~~~~~~~l~GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~ 154 (269)
T 4dnp_A 86 ALGIDCCAYVGHSVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYH-----------GGFEQGEIEKVFSAMEANYE 154 (269)
T ss_dssp HTTCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTTBC-----------CSBCHHHHHHHHHHHHHCHH
T ss_pred hcCCCeEEEEccCHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHHhc-----------cccchHHHHHHHHhccccHH
Confidence 9999999999999999999999999999999999999865432211000 00000000000000000000
Q ss_pred hHH----HHHhhc-cchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEE
Q 012188 329 RTI----CLLICK-NHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVF 403 (468)
Q Consensus 329 ~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii 403 (468)
... ...... .....+.. ...+................ .......+.++++|++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~i~~P~l~i 214 (269)
T 4dnp_A 155 AWVNGFAPLAVGADVPAAVREF-------------SRTLFNMRPDITLFVSRTVF-------NSDMRGVLGLVKVPCHIF 214 (269)
T ss_dssp HHHHHHHHHHHCSSCHHHHHHH-------------HHHHHHSCHHHHHHHHHHHH-------TCCCGGGGGGCCSCEEEE
T ss_pred HHHHHhhhhhccCCChhHHHHH-------------HHHHHccCcchhhhHhhhhc-------chhhHhhhccccCCEEEE
Confidence 000 000000 00000000 00000000000001111111 111223356889999999
Q ss_pred eeCCCCccChhhHHHHHHhCCC-CeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 404 HGEDDELIPVECSYNVQRKIPR-ARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 404 ~G~~D~~vp~~~~~~l~~~~p~-~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
+|++|.++|++.++.+.+.+++ +++++++++||+++. ++|+++++.|.+||++
T Consensus 215 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~p~~~~~~i~~fl~~ 268 (269)
T 4dnp_A 215 QTARDHSVPASVATYLKNHLGGKNTVHWLNIEGHLPHL-SAPTLLAQELRRALSH 268 (269)
T ss_dssp EEESBTTBCHHHHHHHHHHSSSCEEEEEEEEESSCHHH-HCHHHHHHHHHHHHC-
T ss_pred ecCCCcccCHHHHHHHHHhCCCCceEEEeCCCCCCccc-cCHHHHHHHHHHHHhh
Confidence 9999999999999999999998 799999999999997 8999999999999965
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A | Back alignment and structure |
|---|
Probab=99.97 E-value=5.7e-30 Score=242.96 Aligned_cols=273 Identities=15% Similarity=0.154 Sum_probs=175.1
Q ss_pred CCCceeEEEecCC-CCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 012188 168 DCDCKFCTCWSSS-SRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSV 246 (468)
Q Consensus 168 d~~~~~~~~~~~~-~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l 246 (468)
++..++|..++++ +|+|||+||++++...+..+.+.|+ +||+|+++|+||||.|+.+.. .++++++++++ ..+
T Consensus 18 ~g~~l~~~~~g~~~~~~vl~lHG~~~~~~~~~~~~~~l~----~~~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~-~~~ 91 (299)
T 3g9x_A 18 LGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVA----PSHRCIAPDLIGMGKSDKPDL-DYFFDDHVRYL-DAF 91 (299)
T ss_dssp TTEEEEEEEESCSSSCCEEEECCTTCCGGGGTTTHHHHT----TTSCEEEECCTTSTTSCCCCC-CCCHHHHHHHH-HHH
T ss_pred CCeEEEEEecCCCCCCEEEEECCCCccHHHHHHHHHHHc----cCCEEEeeCCCCCCCCCCCCC-cccHHHHHHHH-HHH
Confidence 6677888888654 7899999999988776667888887 799999999999999987765 68999999999 699
Q ss_pred hcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCC--CchhhHHHHHhhcCCCCCchhhhhhhhHHHH
Q 012188 247 IEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPK--GAQASQYVMRKVAPRRVWPLIAFGASMACWY 324 (468)
Q Consensus 247 ~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (468)
++.++.++++++||||||.+++.+|.++|++|+++|++++....... ................. ..... .....+.
T Consensus 92 ~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~ 169 (299)
T 3g9x_A 92 IEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFPTWDEWPEFARETFQAFRTADV-GRELI-IDQNAFI 169 (299)
T ss_dssp HHHTTCCSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEECCCBSSGGGSCGGGHHHHHHHTSSSH-HHHHH-TTSCHHH
T ss_pred HHHhCCCcEEEEEeCccHHHHHHHHHhcchheeEEEEecCCcchhhhhhcchHHHHHHHHHcCCCc-chhhh-ccchhhH
Confidence 99999999999999999999999999999999999999954332111 10111111111111000 00000 0000000
Q ss_pred HHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcc----cccccchHHHhhccCCCcE
Q 012188 325 EHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGT----ANKLDGYLDAVRNHVKCDV 400 (468)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~i~~Pv 400 (468)
. ....... .. .. .......+.............+.......... ...........+.++++|+
T Consensus 170 ~---~~~~~~~-~~-~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 236 (299)
T 3g9x_A 170 E---GALPKCV-VR-PL--------TEVEMDHYREPFLKPVDREPLWRFPNELPIAGEPANIVALVEAYMNWLHQSPVPK 236 (299)
T ss_dssp H---THHHHTC-SS-CC--------CHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCE
T ss_pred H---Hhhhhhh-cc-CC--------CHHHHHHHHHHhccccccchhhhhhhhhhhccccchhhhhhhhhhhhcccCCCCe
Confidence 0 0000000 00 00 00000000000000000000000000000000 0000012233457889999
Q ss_pred EEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhcCCCC
Q 012188 401 NVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSSSGHE 462 (468)
Q Consensus 401 Lii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~~~~ 462 (468)
++++|++|.++|++.++.+.+.+|++++++++++||+++. ++|+++++.|.+|+.+...++
T Consensus 237 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~~~~~~~~~~ 297 (299)
T 3g9x_A 237 LLFWGTPGVLIPPAEAARLAESLPNCKTVDIGPGLHYLQE-DNPDLIGSEIARWLPALHHHH 297 (299)
T ss_dssp EEEEEEECSSSCHHHHHHHHHHSTTEEEEEEEEESSCHHH-HCHHHHHHHHHHHSGGGCCCC
T ss_pred EEEecCCCCCCCHHHHHHHHhhCCCCeEEEeCCCCCcchh-cCHHHHHHHHHHHHhhhhhcc
Confidence 9999999999999999999999999999999999999997 999999999999998875543
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... | Back alignment and structure |
|---|
Probab=99.97 E-value=7.8e-30 Score=238.43 Aligned_cols=243 Identities=13% Similarity=0.057 Sum_probs=155.5
Q ss_pred CCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccC-CceEEEEE
Q 012188 181 SRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNK-VKSFHIVA 259 (468)
Q Consensus 181 ~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~-~~~i~lvG 259 (468)
+++|||+||++.+...|..+++.|+ ++||+|+++|+||||.|+.+....++++++++++ ..++++++ .++++|+|
T Consensus 3 ~~~vvllHG~~~~~~~w~~~~~~L~---~~g~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl-~~~l~~l~~~~~~~lvG 78 (257)
T 3c6x_A 3 FAHFVLIHTICHGAWIWHKLKPLLE---ALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPL-LTFLEALPPGEKVILVG 78 (257)
T ss_dssp CCEEEEECCTTCCGGGGTTHHHHHH---HTTCEEEEECCTTSTTCSCCGGGCCSHHHHTHHH-HHHHHTSCTTCCEEEEE
T ss_pred CCcEEEEcCCccCcCCHHHHHHHHH---hCCCEEEEeCCCCCCCCCCCcccccCHHHHHHHH-HHHHHhccccCCeEEEE
Confidence 5789999999887765567888886 3689999999999999986544468999999999 69999996 58999999
Q ss_pred EcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchh-hHHHHHhhcCCCCCchhh---hh----h-hhHHHHHHHhhH
Q 012188 260 HSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQA-SQYVMRKVAPRRVWPLIA---FG----A-SMACWYEHISRT 330 (468)
Q Consensus 260 hS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~----~-~~~~~~~~~~~~ 330 (468)
|||||.+++.+|.++|++|+++|++++........... ........ + .+.... +. . ....... ..
T Consensus 79 hSmGG~va~~~a~~~p~~v~~lVl~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~---~~ 152 (257)
T 3c6x_A 79 ESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVF-P--DWKDTTYFTYTKDGKEITGLKLGF---TL 152 (257)
T ss_dssp EETHHHHHHHHHHHHGGGEEEEEEEEECCCCSSSCTTHHHHHHHHHS-C--CCTTCEEEEEEETTEEEEEEECCH---HH
T ss_pred ECcchHHHHHHHHhCchhhheEEEEecccCCCCCcchhHHHHHhhcC-c--chhhhhhhhccCCCCccccccccH---HH
Confidence 99999999999999999999999999753221111110 11111111 1 010000 00 0 0000000 00
Q ss_pred HHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCc
Q 012188 331 ICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDEL 410 (468)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~ 410 (468)
....+..... . .. .... ........... ..+ ... .... .. ...++|+|+|+|++|.+
T Consensus 153 ~~~~~~~~~~--~--------~~-~~~~-~~~~~~~~~~~-~~~---~~~--~~~~---~~--~~~~~P~l~i~G~~D~~ 209 (257)
T 3c6x_A 153 LRENLYTLCG--P--------EE-YELA-KMLTRKGSLFQ-NIL---AKR--PFFT---KE--GYGSIKKIYVWTDQDEI 209 (257)
T ss_dssp HHHHTSTTSC--H--------HH-HHHH-HHHCCCBCCCH-HHH---HHS--CCCC---TT--TGGGSCEEEEECTTCSS
T ss_pred HHHHHhcCCC--H--------HH-HHHH-HHhcCCCccch-hhh---ccc--cccC---hh--hcCcccEEEEEeCCCcc
Confidence 0000000000 0 00 0000 00000000000 000 000 0000 00 11268999999999999
Q ss_pred cChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 411 IPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 411 vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
+|++.++.+.+.+|++++++++++||++++ |+|++|++.|.+|+++
T Consensus 210 ~p~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~P~~~~~~l~~f~~~ 255 (257)
T 3c6x_A 210 FLPEFQLWQIENYKPDKVYKVEGGDHKLQL-TKTKEIAEILQEVADT 255 (257)
T ss_dssp SCHHHHHHHHHHSCCSEEEECCSCCSCHHH-HSHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHCCCCeEEEeCCCCCCccc-CCHHHHHHHHHHHHHh
Confidence 999999999999999999999999999998 9999999999999975
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.4e-30 Score=239.45 Aligned_cols=259 Identities=12% Similarity=0.151 Sum_probs=170.6
Q ss_pred CCCceeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCC-CcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 012188 168 DCDCKFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASK-STYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSV 246 (468)
Q Consensus 168 d~~~~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~-~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l 246 (468)
++..++|..++ ++|+|||+||++++...+..+++.|. + .||+|+++|+||||.|+.+.. ++++++++++ ..+
T Consensus 9 ~g~~l~y~~~g-~~~~vv~lhG~~~~~~~~~~~~~~l~---~~~g~~v~~~d~~G~G~s~~~~~--~~~~~~~~~~-~~~ 81 (272)
T 3fsg_A 9 TRSNISYFSIG-SGTPIIFLHGLSLDKQSTCLFFEPLS---NVGQYQRIYLDLPGMGNSDPISP--STSDNVLETL-IEA 81 (272)
T ss_dssp CTTCCEEEEEC-CSSEEEEECCTTCCHHHHHHHHTTST---TSTTSEEEEECCTTSTTCCCCSS--CSHHHHHHHH-HHH
T ss_pred cCCeEEEEEcC-CCCeEEEEeCCCCcHHHHHHHHHHHh---ccCceEEEEecCCCCCCCCCCCC--CCHHHHHHHH-HHH
Confidence 56678888766 67899999999988776666777776 2 499999999999999987775 8999999999 688
Q ss_pred hcc-cCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHH
Q 012188 247 IEP-NKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYE 325 (468)
Q Consensus 247 ~~~-l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (468)
+++ ++.++++++||||||.+|+.+|.++|++|+++|+++|............... ... . ..+...........+..
T Consensus 82 l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~-~~~-~-~~~~~~~~~~~~~~~~~ 158 (272)
T 3fsg_A 82 IEEIIGARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHI-NIL-E-EDINPVENKEYFADFLS 158 (272)
T ss_dssp HHHHHTTCCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGCCCCCCC-CEE-C-SCCCCCTTGGGHHHHHH
T ss_pred HHHHhCCCcEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCccccccccch-hhh-h-hhhhcccCHHHHHHHHH
Confidence 888 8889999999999999999999999999999999998764322110000000 000 0 00000000000000000
Q ss_pred HHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEee
Q 012188 326 HISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHG 405 (468)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G 405 (468)
.........+............. ... ......... ..........+.++++|+++++|
T Consensus 159 -------~~~~~~~~~~~~~~~~~~~~~~~----------~~~---~~~~~~~~~--~~~~~~~~~~~~~~~~P~l~i~g 216 (272)
T 3fsg_A 159 -------MNVIINNQAWHDYQNLIIPGLQK----------EDK---TFIDQLQNN--YSFTFEEKLKNINYQFPFKIMVG 216 (272)
T ss_dssp -------HCSEESHHHHHHHHHHTHHHHHH----------CCH---HHHHHHTTS--CSCTTHHHHTTCCCSSCEEEEEE
T ss_pred -------HhccCCCchhHHHHHHhhhhhhh----------ccH---HHHHHHhhh--cCCChhhhhhhccCCCCEEEEEe
Confidence 00001111111111100000000 000 000000000 11111122234788999999999
Q ss_pred CCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhcC
Q 012188 406 EDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSSS 459 (468)
Q Consensus 406 ~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~ 459 (468)
++|.++|++.++.+.+.+|++++++++++||+++. ++|+++++.|.+||++..
T Consensus 217 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~~~ 269 (272)
T 3fsg_A 217 RNDQVVGYQEQLKLINHNENGEIVLLNRTGHNLMI-DQREAVGFHFDLFLDELN 269 (272)
T ss_dssp TTCTTTCSHHHHHHHTTCTTEEEEEESSCCSSHHH-HTHHHHHHHHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHhcCCCeEEEecCCCCCchh-cCHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999997 899999999999998753
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.8e-30 Score=249.06 Aligned_cols=278 Identities=14% Similarity=0.165 Sum_probs=164.2
Q ss_pred CCCceeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCC--CC-CCCCHHHHHHHHHH
Q 012188 168 DCDCKFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKP--TD-SLYTVREHLDMIEK 244 (468)
Q Consensus 168 d~~~~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~--~~-~~~t~~~~~~di~~ 244 (468)
+|..++|..++ ++|+|||+||++++...|..+++.|. ++||+|+++|+||||.|+.+ .. ..++++++++|+ .
T Consensus 19 ~g~~l~y~~~G-~g~~vvllHG~~~~~~~w~~~~~~L~---~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl-~ 93 (328)
T 2cjp_A 19 NGLNMHLAELG-EGPTILFIHGFPELWYSWRHQMVYLA---ERGYRAVAPDLRGYGDTTGAPLNDPSKFSILHLVGDV-V 93 (328)
T ss_dssp TTEEEEEEEEC-SSSEEEEECCTTCCGGGGHHHHHHHH---TTTCEEEEECCTTSTTCBCCCTTCGGGGSHHHHHHHH-H
T ss_pred CCcEEEEEEcC-CCCEEEEECCCCCchHHHHHHHHHHH---HCCcEEEEECCCCCCCCCCcCcCCcccccHHHHHHHH-H
Confidence 55567888876 57899999999987776666888876 36899999999999999876 32 468999999999 6
Q ss_pred HHhcccC--CceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCc-hhhhhhhhH
Q 012188 245 SVIEPNK--VKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWP-LIAFGASMA 321 (468)
Q Consensus 245 ~l~~~l~--~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 321 (468)
.+++.++ .++++|+||||||.+|+.+|.++|++|+++|+++++.................... ..+. .........
T Consensus 94 ~~l~~l~~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 172 (328)
T 2cjp_A 94 ALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVHFSKRNPKMNVVEGLKAIYGE-DHYISRFQVPGEIE 172 (328)
T ss_dssp HHHHHHCTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCSSCCHHHHHHHHHCT-TBHHHHTSSTTHHH
T ss_pred HHHHHhcCCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEEccCCCcccccCChHHHHHhhccc-chHHHhhhCCCcHH
Confidence 9999999 89999999999999999999999999999999997653321100011111111000 0000 000000000
Q ss_pred HHHH--HHhhHHHHHhh---c-------cchhHHH------HHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccc
Q 012188 322 CWYE--HISRTICLLIC---K-------NHRVWEF------LAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTAN 383 (468)
Q Consensus 322 ~~~~--~~~~~~~~~~~---~-------~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (468)
.... .........+. . ...+... ....+.......+. ..+......... ..+.....
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~ 247 (328)
T 2cjp_A 173 AEFAPIGAKSVLKKILTYRDPAPFYFPKGKGLEAIPDAPVALSSWLSEEELDYYA-NKFEQTGFTGAV----NYYRALPI 247 (328)
T ss_dssp HHHHHHCHHHHHHHHHTCCCSSCCBCCTTCTTTTSCCCCGGGGTTSCHHHHHHHH-HHHHHHCSHHHH----HHHHTHHH
T ss_pred HHhhccCHHHHHHHHhcccCCCcccccccchhhhcccccccCcCCCCHHHHHHHH-HHhcccCCcchH----HHHHhccc
Confidence 0000 00000000000 0 0000000 00000000000000 000000000000 00000000
Q ss_pred cccchHHHhhccCCCcEEEEeeCCCCccChhh------HHHHHHhCCCC-eEEEecCCCccccccCcHHHHHHHHHHHHh
Q 012188 384 KLDGYLDAVRNHVKCDVNVFHGEDDELIPVEC------SYNVQRKIPRA-RVKVIEKKDHITIVVGRQKTFARELEEIWR 456 (468)
Q Consensus 384 ~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~------~~~l~~~~p~~-~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~ 456 (468)
.........+.++++|+++|+|++|.++|++. ++.+.+.+|++ ++++++++||+++. |+|+++++.|.+||+
T Consensus 248 ~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~ 326 (328)
T 2cjp_A 248 NWELTAPWTGAQVKVPTKFIVGEFDLVYHIPGAKEYIHNGGFKKDVPLLEEVVVLEGAAHFVSQ-ERPHEISKHIYDFIQ 326 (328)
T ss_dssp HHHHTGGGTTCCCCSCEEEEEETTCGGGGSTTHHHHHHHSHHHHHSTTBCCCEEETTCCSCHHH-HSHHHHHHHHHHHHT
T ss_pred chhhhhhccCCccCCCEEEEEeCCcccccCcchhhhhhhhhHHHHhcCCeeEEEcCCCCCCcch-hCHHHHHHHHHHHHH
Confidence 00000001246789999999999999998742 25677888999 89999999999997 899999999999996
Q ss_pred h
Q 012188 457 S 457 (468)
Q Consensus 457 ~ 457 (468)
+
T Consensus 327 ~ 327 (328)
T 2cjp_A 327 K 327 (328)
T ss_dssp T
T ss_pred h
Confidence 4
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A | Back alignment and structure |
|---|
Probab=99.97 E-value=5.8e-29 Score=236.40 Aligned_cols=264 Identities=15% Similarity=0.112 Sum_probs=161.0
Q ss_pred CCCceeEEEecCC-C-CeEEEEecCCC-CccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 012188 168 DCDCKFCTCWSSS-S-RDTLFVKTQGP-SAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEK 244 (468)
Q Consensus 168 d~~~~~~~~~~~~-~-p~vl~lHG~g~-s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~ 244 (468)
++..++|..++++ + ++|||+||+++ +..|+..+...+ ++||+|+++|+||||.|+.+....++++++++++ .
T Consensus 13 ~g~~l~~~~~g~~~~~~~vvllHG~~~~~~~~~~~~~~l~----~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~dl-~ 87 (293)
T 1mtz_A 13 NGIYIYYKLCKAPEEKAKLMTMHGGPGMSHDYLLSLRDMT----KEGITVLFYDQFGCGRSEEPDQSKFTIDYGVEEA-E 87 (293)
T ss_dssp TTEEEEEEEECCSSCSEEEEEECCTTTCCSGGGGGGGGGG----GGTEEEEEECCTTSTTSCCCCGGGCSHHHHHHHH-H
T ss_pred CCEEEEEEEECCCCCCCeEEEEeCCCCcchhHHHHHHHHH----hcCcEEEEecCCCCccCCCCCCCcccHHHHHHHH-H
Confidence 4556778888754 3 79999999755 445665443333 3789999999999999987653348999999999 6
Q ss_pred HHhccc-CCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHH
Q 012188 245 SVIEPN-KVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACW 323 (468)
Q Consensus 245 ~l~~~l-~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (468)
.+++.+ +.++++|+||||||.+|+.+|.++|++|+++|+++++.... ........... ..+.. .
T Consensus 88 ~~~~~l~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~-----~~~~~~~~~~~--~~~~~-----~--- 152 (293)
T 1mtz_A 88 ALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVP-----LTVKEMNRLID--ELPAK-----Y--- 152 (293)
T ss_dssp HHHHHHHTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHH-----HHHHHHHHHHH--TSCHH-----H---
T ss_pred HHHHHhcCCCcEEEEEecHHHHHHHHHHHhCchhhheEEecCCccChH-----HHHHHHHHHHH--hcCHH-----H---
Confidence 999999 99999999999999999999999999999999999864310 00000000000 00000 0
Q ss_pred HHHHhhHHHHHhhccchhHHHHHHHHhh---------hHHHHHhhhccccccchhHHhhHhH--HHhcccccccchHHHh
Q 012188 324 YEHISRTICLLICKNHRVWEFLAKLVTR---------NRIRTFLLEGFFCHTHNAAWHTLHN--IICGTANKLDGYLDAV 392 (468)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 392 (468)
...+........................ ........ ..... ..+..+.. ................
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (293)
T 1mtz_A 153 RDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLE-YAERR---NVYRIMNGPNEFTITGTIKDWDITDK 228 (293)
T ss_dssp HHHHHHHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHH-HHHHS---SHHHHHTCSBTTBCCSTTTTCBCTTT
T ss_pred HHHHHHhhccCCcChHHHHHHHHHHHHhhcccccCchHHHHHhHh-hhccc---hhhhhccCcceecccccccCCChhhh
Confidence 0000000000000000000000000000 00000000 00000 00000000 0000000001112334
Q ss_pred hccCCCcEEEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 393 RNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 393 ~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
+.++++|+|+|+|++| .++++.++.+.+.+|++++++++++||+++. |+|+++++.|.+||++
T Consensus 229 l~~i~~P~lii~G~~D-~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~~ 291 (293)
T 1mtz_A 229 ISAIKIPTLITVGEYD-EVTPNVARVIHEKIAGSELHVFRDCSHLTMW-EDREGYNKLLSDFILK 291 (293)
T ss_dssp GGGCCSCEEEEEETTC-SSCHHHHHHHHHHSTTCEEEEETTCCSCHHH-HSHHHHHHHHHHHHHT
T ss_pred hccCCCCEEEEeeCCC-CCCHHHHHHHHHhCCCceEEEeCCCCCCccc-cCHHHHHHHHHHHHHh
Confidence 5788999999999999 6788889999999999999999999999997 8999999999999975
|
| >4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A | Back alignment and structure |
|---|
Probab=99.97 E-value=5.3e-31 Score=247.26 Aligned_cols=262 Identities=14% Similarity=0.152 Sum_probs=173.4
Q ss_pred CCceeEEEecCCCCeEEEEecCCCCccchhhhhhh-ccccCCCcceEEEECCCCCCCCCCCCC--CCCCHHHHHHHHHHH
Q 012188 169 CDCKFCTCWSSSSRDTLFVKTQGPSAFWTETLFPN-FSSASKSTYRLFAIDLLGFGRSPKPTD--SLYTVREHLDMIEKS 245 (468)
Q Consensus 169 ~~~~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~-L~~~~~~gy~Via~D~~G~G~S~~~~~--~~~t~~~~~~di~~~ 245 (468)
+..++|+.+++++|+|||+||++++...+..+.+. +. +||+|+++|+||||.|+.+.. ..++++++++++ ..
T Consensus 12 ~~~~~~~~~~~~~~~vv~lHG~~~~~~~~~~~~~~l~~----~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~-~~ 86 (279)
T 4g9e_A 12 HGRIAVRESEGEGAPLLMIHGNSSSGAIFAPQLEGEIG----KKWRVIAPDLPGHGKSTDAIDPDRSYSMEGYADAM-TE 86 (279)
T ss_dssp TEEEEEEECCCCEEEEEEECCTTCCGGGGHHHHHSHHH----HHEEEEEECCTTSTTSCCCSCHHHHSSHHHHHHHH-HH
T ss_pred CceEEEEecCCCCCeEEEECCCCCchhHHHHHHhHHHh----cCCeEEeecCCCCCCCCCCCCcccCCCHHHHHHHH-HH
Confidence 34688888888899999999999887766667776 54 899999999999999987642 457999999999 69
Q ss_pred HhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHH
Q 012188 246 VIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYE 325 (468)
Q Consensus 246 l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (468)
+++.++.++++++||||||.+++.+|.++|+ +.++|+++++....... ........................
T Consensus 87 ~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~-~~~~vl~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 158 (279)
T 4g9e_A 87 VMQQLGIADAVVFGWSLGGHIGIEMIARYPE-MRGLMITGTPPVAREEV-------GQGFKSGPDMALAGQEIFSERDVE 158 (279)
T ss_dssp HHHHHTCCCCEEEEETHHHHHHHHHTTTCTT-CCEEEEESCCCCCGGGH-------HHHBCCSTTGGGGGCSCCCHHHHH
T ss_pred HHHHhCCCceEEEEECchHHHHHHHHhhCCc-ceeEEEecCCCCCCCcc-------chhhccchhhhhcCcccccHHHHH
Confidence 9999999999999999999999999999998 99999998775442111 011111110000000000000000
Q ss_pred HHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEee
Q 012188 326 HISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHG 405 (468)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G 405 (468)
.......... . ........... .............. .........+.++++|+++++|
T Consensus 159 ---~~~~~~~~~~-~-~~~~~~~~~~~-------------~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~P~l~i~g 216 (279)
T 4g9e_A 159 ---SYARSTCGEP-F-EASLLDIVART-------------DGRARRIMFEKFGS----GTGGNQRDIVAEAQLPIAVVNG 216 (279)
T ss_dssp ---HHHHHHHCSS-C-CHHHHHHHHHS-------------CHHHHHHHHHHHHH----TCBCCHHHHHHHCCSCEEEEEE
T ss_pred ---HHHHhhccCc-c-cHHHHHHHHhh-------------hccchHHHHHHhhc----cCCchHHHHHHhcCCCEEEEEc
Confidence 0000000000 0 00000000000 00000000000000 1112234445788999999999
Q ss_pred CCCCccChhhHHHHH-HhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhcCCCCCCCC
Q 012188 406 EDDELIPVECSYNVQ-RKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSSSGHEPSEN 466 (468)
Q Consensus 406 ~~D~~vp~~~~~~l~-~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~~~~~~~~ 466 (468)
++|.++|++.++.+. +.+|++++++++++||+++. ++|+++++.|.+||++........+
T Consensus 217 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~p~~~~~~i~~fl~~~~~~~~~~~ 277 (279)
T 4g9e_A 217 RDEPFVELDFVSKVKFGNLWEGKTHVIDNAGHAPFR-EAPAEFDAYLARFIRDCTQLEHHHH 277 (279)
T ss_dssp TTCSSBCHHHHTTCCCSSBGGGSCEEETTCCSCHHH-HSHHHHHHHHHHHHHHHHSSCCCC-
T ss_pred CCCcccchHHHHHHhhccCCCCeEEEECCCCcchHH-hCHHHHHHHHHHHHHHhhhhhhhhc
Confidence 999999999998887 77889999999999999997 9999999999999988765544433
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-29 Score=233.03 Aligned_cols=249 Identities=16% Similarity=0.165 Sum_probs=166.1
Q ss_pred CCCCceeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 012188 167 SDCDCKFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSV 246 (468)
Q Consensus 167 ~d~~~~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l 246 (468)
.||..++|..+++ +|+|||+||++++...+..+.+.|. +||+|+++|+||||.|+.+. .++++++++++ ..+
T Consensus 10 ~~g~~l~~~~~g~-~~~vv~lHG~~~~~~~~~~~~~~l~----~~~~vi~~d~~G~G~S~~~~--~~~~~~~~~~~-~~~ 81 (262)
T 3r0v_A 10 SDGTPIAFERSGS-GPPVVLVGGALSTRAGGAPLAERLA----PHFTVICYDRRGRGDSGDTP--PYAVEREIEDL-AAI 81 (262)
T ss_dssp TTSCEEEEEEEEC-SSEEEEECCTTCCGGGGHHHHHHHT----TTSEEEEECCTTSTTCCCCS--SCCHHHHHHHH-HHH
T ss_pred CCCcEEEEEEcCC-CCcEEEECCCCcChHHHHHHHHHHh----cCcEEEEEecCCCcCCCCCC--CCCHHHHHHHH-HHH
Confidence 4677788888764 7899999999988877777888887 89999999999999998775 58999999999 699
Q ss_pred hcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchh----hHHHHHhhcCCCCCchhhhhhhhHH
Q 012188 247 IEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQA----SQYVMRKVAPRRVWPLIAFGASMAC 322 (468)
Q Consensus 247 ~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (468)
+++++ ++++++||||||.+++.+|.++| +|+++|+++|+.......... ...+........ .......
T Consensus 82 ~~~l~-~~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 153 (262)
T 3r0v_A 82 IDAAG-GAAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYAVDDSRPPVPPDYQTRLDALLAEGR------RGDAVTY 153 (262)
T ss_dssp HHHTT-SCEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCCCSTTSCCCCTTHHHHHHHHHHTTC------HHHHHHH
T ss_pred HHhcC-CCeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcccccccchhhhHHHHHHHHHhhccc------hhhHHHH
Confidence 99999 99999999999999999999999 999999999876553322110 111111100000 0000000
Q ss_pred HHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEE
Q 012188 323 WYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNV 402 (468)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLi 402 (468)
+... .. ...+.....+......... ... ...+.. ....... .......+.++++|+++
T Consensus 154 ~~~~-------~~----~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~-~~~~~~~----~~~~~~~l~~i~~P~li 211 (262)
T 3r0v_A 154 FMTE-------GV----GVPPDLVAQMQQAPMWPGM-EAV-----AHTLPY-DHAVMGD----NTIPTARFASISIPTLV 211 (262)
T ss_dssp HHHH-------TS----CCCHHHHHHHHTSTTHHHH-HHT-----GGGHHH-HHHHHTT----SCCCHHHHTTCCSCEEE
T ss_pred Hhhc-------cc----CCCHHHHHHHHhhhcccch-HHH-----Hhhhhh-hhhhhhc----CCCCHHHcCcCCCCEEE
Confidence 0000 00 0000000000000000000 000 000000 0000000 11113445788999999
Q ss_pred EeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 403 FHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 403 i~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
++|++|.++|++.++.+.+.+|++++++++++|| + ++|+++++.|.+||++
T Consensus 212 i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH---~-~~p~~~~~~i~~fl~~ 262 (262)
T 3r0v_A 212 MDGGASPAWIRHTAQELADTIPNARYVTLENQTH---T-VAPDAIAPVLVEFFTR 262 (262)
T ss_dssp EECTTCCHHHHHHHHHHHHHSTTEEEEECCCSSS---S-CCHHHHHHHHHHHHC-
T ss_pred EeecCCCCCCHHHHHHHHHhCCCCeEEEecCCCc---c-cCHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999 3 6899999999999963
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-29 Score=237.06 Aligned_cols=245 Identities=17% Similarity=0.208 Sum_probs=155.0
Q ss_pred eeEEEecCCCC-eEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhccc
Q 012188 172 KFCTCWSSSSR-DTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPN 250 (468)
Q Consensus 172 ~~~~~~~~~~p-~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l 250 (468)
++|..+++ +| +|||+||++++...|..+++.|+ ++|+|+++|+||||.|+.+ ..++++++++++ ++.+
T Consensus 4 l~~~~~G~-g~~~vvllHG~~~~~~~w~~~~~~L~----~~~~vi~~Dl~G~G~S~~~--~~~~~~~~~~~l----~~~l 72 (258)
T 1m33_A 4 IWWQTKGQ-GNVHLVLLHGWGLNAEVWRCIDEELS----SHFTLHLVDLPGFGRSRGF--GALSLADMAEAV----LQQA 72 (258)
T ss_dssp CCEEEECC-CSSEEEEECCTTCCGGGGGGTHHHHH----TTSEEEEECCTTSTTCCSC--CCCCHHHHHHHH----HTTS
T ss_pred eEEEEecC-CCCeEEEECCCCCChHHHHHHHHHhh----cCcEEEEeeCCCCCCCCCC--CCcCHHHHHHHH----HHHh
Confidence 56666654 56 99999999987776667888887 7899999999999999876 357898888666 3444
Q ss_pred CCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHH---
Q 012188 251 KVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHI--- 327 (468)
Q Consensus 251 ~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 327 (468)
+ ++++|+||||||.+|+.+|.++|++|+++|++++........ .|.... ......+...+
T Consensus 73 ~-~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~---------------~~~~~~-~~~~~~~~~~~~~~ 135 (258)
T 1m33_A 73 P-DKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARD---------------EWPGIK-PDVLAGFQQQLSDD 135 (258)
T ss_dssp C-SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBT---------------TBCSBC-HHHHHHHHHHHHHH
T ss_pred C-CCeEEEEECHHHHHHHHHHHHhhHhhceEEEECCCCCccccc---------------cccCCC-HHHHHHHHHHHhcc
Confidence 5 799999999999999999999999999999998753211100 000000 00000000000
Q ss_pred -hhHHHHHhhc---cchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEE
Q 012188 328 -SRTICLLICK---NHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVF 403 (468)
Q Consensus 328 -~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii 403 (468)
.......... .........+ .......... ................ ......+.++++|+++|
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~--~~~~~~~~~~~~~~~~------~~~~~~l~~i~~P~l~i 202 (258)
T 1m33_A 136 QQRTVERFLALQTMGTETARQDAR-----ALKKTVLALP--MPEVDVLNGGLEILKT------VDLRQPLQNVSMPFLRL 202 (258)
T ss_dssp HHHHHHHHHHTTSTTSTTHHHHHH-----HHHHHHHTSC--CCCHHHHHHHHHHHHH------CCCTTGGGGCCSCEEEE
T ss_pred HHHHHHHHHHHHhcCCccchhhHH-----HHHHHHHhcc--CCcHHHHHHHHHHHHh------CCHHHHHhhCCCCEEEE
Confidence 0000000000 0000000000 0000000000 0000000000001100 11122346789999999
Q ss_pred eeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 404 HGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 404 ~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
+|++|.++|.+.++.+.+.+|++++++++++||+++. ++|+++++.|.+|+++.
T Consensus 203 ~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~ 256 (258)
T 1m33_A 203 YGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFI-SHPAEFCHLLVALKQRV 256 (258)
T ss_dssp EETTCSSSCGGGCC-CTTTCTTCEEEEETTCCSCHHH-HSHHHHHHHHHHHHTTS
T ss_pred eecCCCCCCHHHHHHHHHhCccceEEEeCCCCCCccc-cCHHHHHHHHHHHHHhc
Confidence 9999999999999999888999999999999999998 89999999999999764
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-29 Score=239.79 Aligned_cols=260 Identities=15% Similarity=0.103 Sum_probs=166.7
Q ss_pred CCCceeEEEecCCCCeEEEEecCCCCccchh-hhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 012188 168 DCDCKFCTCWSSSSRDTLFVKTQGPSAFWTE-TLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSV 246 (468)
Q Consensus 168 d~~~~~~~~~~~~~p~vl~lHG~g~s~~~~~-~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l 246 (468)
++..++|..++ ++|+|||+||++++...+. .+.+.+. ++||+|+++|+||||.|+.+. .++++++++++ ..+
T Consensus 31 ~~~~l~y~~~g-~~~~vv~lHG~~~~~~~~~~~~~~~l~---~~g~~vi~~D~~G~G~s~~~~--~~~~~~~~~~~-~~~ 103 (293)
T 3hss_A 31 RVINLAYDDNG-TGDPVVFIAGRGGAGRTWHPHQVPAFL---AAGYRCITFDNRGIGATENAE--GFTTQTMVADT-AAL 103 (293)
T ss_dssp CEEEEEEEEEC-SSEEEEEECCTTCCGGGGTTTTHHHHH---HTTEEEEEECCTTSGGGTTCC--SCCHHHHHHHH-HHH
T ss_pred ccceEEEEEcC-CCCEEEEECCCCCchhhcchhhhhhHh---hcCCeEEEEccCCCCCCCCcc--cCCHHHHHHHH-HHH
Confidence 34456666655 6789999999988766544 4556553 389999999999999997665 47999999999 699
Q ss_pred hcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHH
Q 012188 247 IEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEH 326 (468)
Q Consensus 247 ~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (468)
++.++.++++++||||||.+++.+|.++|++++++|+++|+........................+. ........
T Consensus 104 l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 178 (293)
T 3hss_A 104 IETLDIAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRARQFFNKAEAELYDSGVQLPP-----TYDARARL 178 (293)
T ss_dssp HHHHTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHHHHHHHTCCCCH-----HHHHHHHH
T ss_pred HHhcCCCcEEEEeeCccHHHHHHHHHHChHHHHhhheecccccCChhhhHHHHHHHHHHhhcccchh-----hHHHHHHH
Confidence 9999999999999999999999999999999999999998764321110000000000000000000 00000000
Q ss_pred HhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeC
Q 012188 327 ISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGE 406 (468)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~ 406 (468)
...... ................... .......+ .... ...........+.++++|+++++|+
T Consensus 179 ~~~~~~----------~~~~~~~~~~~~~~~~~~~--~~~~~~~~---~~~~---~~~~~~~~~~~l~~i~~P~lii~g~ 240 (293)
T 3hss_A 179 LENFSR----------KTLNDDVAVGDWIAMFSMW--PIKSTPGL---RCQL---DCAPQTNRLPAYRNIAAPVLVIGFA 240 (293)
T ss_dssp HHHSCH----------HHHTCHHHHHHHHHHHHHS--CCCCCHHH---HHHH---TSSCSSCCHHHHTTCCSCEEEEEET
T ss_pred hhhccc----------ccccccccHHHHHHHHhhc--cccccHHH---HhHh---hhccccchHHHHhhCCCCEEEEEeC
Confidence 000000 0000000000000000000 00000000 0001 0111122234457889999999999
Q ss_pred CCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 407 DDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 407 ~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
+|.++|++.++.+.+.+|++++++++++||+++. ++|+++++.|.+||++.
T Consensus 241 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~p~~~~~~i~~fl~~~ 291 (293)
T 3hss_A 241 DDVVTPPYLGREVADALPNGRYLQIPDAGHLGFF-ERPEAVNTAMLKFFASV 291 (293)
T ss_dssp TCSSSCHHHHHHHHHHSTTEEEEEETTCCTTHHH-HSHHHHHHHHHHHHHTC
T ss_pred CCCCCCHHHHHHHHHHCCCceEEEeCCCcchHhh-hCHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999997 89999999999999874
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-29 Score=235.85 Aligned_cols=250 Identities=14% Similarity=0.075 Sum_probs=160.3
Q ss_pred CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCC-ceEEEE
Q 012188 180 SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKV-KSFHIV 258 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~-~~i~lv 258 (468)
.+|+|||+||++++...|..+.+.|+ ++||+|+++|+||||.|+.+....++++++++++ ..++++++. ++++|+
T Consensus 3 ~g~~vv~lHG~~~~~~~~~~~~~~l~---~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l-~~~l~~l~~~~~~~lv 78 (258)
T 3dqz_A 3 RKHHFVLVHNAYHGAWIWYKLKPLLE---SAGHRVTAVELAASGIDPRPIQAVETVDEYSKPL-IETLKSLPENEEVILV 78 (258)
T ss_dssp CCCEEEEECCTTCCGGGGTTHHHHHH---HTTCEEEEECCTTSTTCSSCGGGCCSHHHHHHHH-HHHHHTSCTTCCEEEE
T ss_pred CCCcEEEECCCCCccccHHHHHHHHH---hCCCEEEEecCCCCcCCCCCCCccccHHHhHHHH-HHHHHHhcccCceEEE
Confidence 35899999999987776667888887 4689999999999999988765568999999999 699999988 899999
Q ss_pred EEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHHhhcc
Q 012188 259 AHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKN 338 (468)
Q Consensus 259 GhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (468)
||||||.+++.+|.++|++|+++|++++................. .....|....+...... . .. ....
T Consensus 79 GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~--~---~~----~~~~ 147 (258)
T 3dqz_A 79 GFSFGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLDKYM--EMPGGLGDCEFSSHETR--N---GT----MSLL 147 (258)
T ss_dssp EETTHHHHHHHHHTTCGGGEEEEEEESCCCCCSSSCTTHHHHHHH--TSTTCCTTCEEEEEEET--T---EE----EEEE
T ss_pred EeChhHHHHHHHHHhChHhhcEEEEecCCCCCCCCcchHHHHHhc--ccchhhhhcccchhhhh--c---cC----hhhh
Confidence 999999999999999999999999999865543332211111111 11111111000000000 0 00 0000
Q ss_pred chhHHHHHHHHhh---hHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChhh
Q 012188 339 HRVWEFLAKLVTR---NRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVEC 415 (468)
Q Consensus 339 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~ 415 (468)
..........+.. ............. ... +...+...... . .....++|+++|+|++|.++|++.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~-~-----~~~~~~~P~l~i~g~~D~~~~~~~ 215 (258)
T 3dqz_A 148 KMGPKFMKARLYQNCPIEDYELAKMLHRQ-GSF-----FTEDLSKKEKF-S-----EEGYGSVQRVYVMSSEDKAIPCDF 215 (258)
T ss_dssp ECCHHHHHHHTSTTSCHHHHHHHHHHCCC-EEC-----CHHHHHTSCCC-C-----TTTGGGSCEEEEEETTCSSSCHHH
T ss_pred hhhHHHHHHHhhccCCHHHHHHHHHhccC-Cch-----hhhhhhccccc-c-----ccccccCCEEEEECCCCeeeCHHH
Confidence 0000000000000 0000000000000 000 00000000000 0 011226899999999999999999
Q ss_pred HHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 416 SYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 416 ~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
++.+.+.+|++++++++++||+++. ++|+++++.|.+|+++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~gH~~~~-~~p~~~~~~i~~fl~~ 256 (258)
T 3dqz_A 216 IRWMIDNFNVSKVYEIDGGDHMVML-SKPQKLFDSLSAIATD 256 (258)
T ss_dssp HHHHHHHSCCSCEEEETTCCSCHHH-HSHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCcccEEEcCCCCCchhh-cChHHHHHHHHHHHHH
Confidence 9999999999999999999999998 9999999999999975
|
| >2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.96 E-value=9e-29 Score=242.51 Aligned_cols=286 Identities=12% Similarity=0.146 Sum_probs=171.3
Q ss_pred CCCceeEEEecC----CCCeEEEEecCCCCcc-------------chhhhhhhccccCCCcceEEEECCCC--CCCCCCC
Q 012188 168 DCDCKFCTCWSS----SSRDTLFVKTQGPSAF-------------WTETLFPNFSSASKSTYRLFAIDLLG--FGRSPKP 228 (468)
Q Consensus 168 d~~~~~~~~~~~----~~p~vl~lHG~g~s~~-------------~~~~~~~~L~~~~~~gy~Via~D~~G--~G~S~~~ 228 (468)
++..++|..+++ ++|+|||+||++++.. +|..+++.+..++++||+|+++|+|| ||.|...
T Consensus 29 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~vi~~D~~G~~~G~s~~~ 108 (366)
T 2pl5_A 29 SPVVIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSGPL 108 (366)
T ss_dssp SSEEEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSSTT
T ss_pred cCceeeEEeccCcCCCCCceEEEecccCCcccccccccccccccchHHhhcCCcccccccccEEEEecCCCcccCCCCCC
Confidence 555788888876 3689999999988765 45556653223335899999999999 8988643
Q ss_pred CC--C----------CCCHHHHHHHHHHHHhcccCCceE-EEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCc
Q 012188 229 TD--S----------LYTVREHLDMIEKSVIEPNKVKSF-HIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGA 295 (468)
Q Consensus 229 ~~--~----------~~t~~~~~~di~~~l~~~l~~~~i-~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~ 295 (468)
.. . .++++++++++ ..++++++.+++ +|+||||||.+|+.+|.++|++|+++|+++++........
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~dl-~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 187 (366)
T 2pl5_A 109 SIHPETSTPYGSRFPFVSIQDMVKAQ-KLLVESLGIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHSAMQI 187 (366)
T ss_dssp SBCTTTSSBCGGGSCCCCHHHHHHHH-HHHHHHTTCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSBCCHHHH
T ss_pred CCCCCCCccccCCCCcccHHHHHHHH-HHHHHHcCCceEEEEEEeCccHHHHHHHHHhCcHhhhheeEeccCccCCCccc
Confidence 21 1 47999999999 699999999998 8999999999999999999999999999998764321110
Q ss_pred hhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhh-----------HHHHHh---hhc
Q 012188 296 QASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRN-----------RIRTFL---LEG 361 (468)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~---~~~ 361 (468)
.........+.....|....+..........+.+.......... ......+... ....+. ...
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (366)
T 2pl5_A 188 AFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSD---DKMREKFGRNPPRGNILSTDFAVGSYLIYQGES 264 (366)
T ss_dssp HHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCH---HHHHHHHTTSCCSSCTTTTTTTSCGGGGSTTCC
T ss_pred hhhHHHHHHHHhCcccccccccccccccchHHHHHhhccccCCH---HHHHHHhhhhhhcccccchhhhHHHHHHHHHHh
Confidence 00111111111111110000000000000000000000000000 0000000000 000000 000
Q ss_pred cccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChhhHHHHHHhCC----CCeEEEe-cCCCc
Q 012188 362 FFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIP----RARVKVI-EKKDH 436 (468)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p----~~~l~~i-~~~gH 436 (468)
+........+......+..............+.++++|+|+|+|++|.++|++.++.+.+.+| +++++++ +++||
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH 344 (366)
T 2pl5_A 265 FVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYVELQSGEGH 344 (366)
T ss_dssp SSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTCCEEEEEECCCBSS
T ss_pred hhcccChhHHHHHHhhhhhhccccccchhhhhccCCCCEEEEecCCCcccCHHHHHHHHHHhhhcccCeEEEEeCCCCCc
Confidence 000111111111111111111100012334567899999999999999999999999999998 8999999 89999
Q ss_pred cccccCcHHHHHHHHHHHHhhc
Q 012188 437 ITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 437 ~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
+++. ++|+++++.|.+||++.
T Consensus 345 ~~~~-e~p~~~~~~i~~fl~~~ 365 (366)
T 2pl5_A 345 DSFL-LKNPKQIEILKGFLENP 365 (366)
T ss_dssp GGGG-SCCHHHHHHHHHHHHCC
T ss_pred chhh-cChhHHHHHHHHHHccC
Confidence 9997 89999999999999763
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.5e-29 Score=241.79 Aligned_cols=261 Identities=17% Similarity=0.183 Sum_probs=170.5
Q ss_pred CCCCceeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 012188 167 SDCDCKFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSV 246 (468)
Q Consensus 167 ~d~~~~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l 246 (468)
.++..+.|..|++++|+|||+||++++...|..+++.| ||+|+++|+||||.|+.+....++++++++++ ..+
T Consensus 67 ~~~~~~~~~~~g~~~~~vv~~hG~~~~~~~~~~~~~~l------g~~Vi~~D~~G~G~S~~~~~~~~~~~~~a~dl-~~~ 139 (330)
T 3p2m_A 67 VQAGAISALRWGGSAPRVIFLHGGGQNAHTWDTVIVGL------GEPALAVDLPGHGHSAWREDGNYSPQLNSETL-APV 139 (330)
T ss_dssp EEETTEEEEEESSSCCSEEEECCTTCCGGGGHHHHHHS------CCCEEEECCTTSTTSCCCSSCBCCHHHHHHHH-HHH
T ss_pred ecCceEEEEEeCCCCCeEEEECCCCCccchHHHHHHHc------CCeEEEEcCCCCCCCCCCCCCCCCHHHHHHHH-HHH
Confidence 46677999999998999999999998877665566554 79999999999999987666678999999999 699
Q ss_pred hcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchh-hhhhhhHHHHH
Q 012188 247 IEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLI-AFGASMACWYE 325 (468)
Q Consensus 247 ~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 325 (468)
++.++.++++|+||||||.+++.+|.++|++|+++|++++.... ................. ........+..
T Consensus 140 l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (330)
T 3p2m_A 140 LRELAPGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSA-------LQRHAELTAEQRGTVALMHGEREFPSFQA 212 (330)
T ss_dssp HHHSSTTCCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCHHH-------HHHHHHHTCC-----------CCBSCHHH
T ss_pred HHHhCCCCcEEEEECHhHHHHHHHHHhChhhcceEEEEcCCCcc-------chhhhhhhhhhhhhhhhhcCCccccCHHH
Confidence 99999999999999999999999999999999999999975321 11111000000000000 00000000000
Q ss_pred HHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEee
Q 012188 326 HISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHG 405 (468)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G 405 (468)
........ .... .................. ..+......+.. ..........+.++++|+|+++|
T Consensus 213 ~~~~~~~~---~~~~---------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~l~~i~~PvLii~G 277 (330)
T 3p2m_A 213 MLDLTIAA---APHR---------DVKSLRRGVFHNSRRLDN-GNWVWRYDAIRT--FGDFAGLWDDVDALSAPITLVRG 277 (330)
T ss_dssp HHHHHHHH---CTTS---------CHHHHHHHHHTTEEECSS-SCEEESSCCCSB--CCCHHHHHHHHHHCCSCEEEEEE
T ss_pred HHHHHHhc---CCCC---------CHHHHHHHHHhcccccCC-CceEEeechhhC--ccccHHHHHHHhhCCCCEEEEEe
Confidence 00000000 0000 000111111111100000 000000000000 00001122345788999999999
Q ss_pred CCCCccChhhHHHHHHhCCCCe-EEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 406 EDDELIPVECSYNVQRKIPRAR-VKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 406 ~~D~~vp~~~~~~l~~~~p~~~-l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
++|.++|++.++.+.+.+|+++ +++++++||+++. ++|+++++.|.+||++
T Consensus 278 ~~D~~v~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 329 (330)
T 3p2m_A 278 GSSGFVTDQDTAELHRRATHFRGVHIVEKSGHSVQS-DQPRALIEIVRGVLDT 329 (330)
T ss_dssp TTCCSSCHHHHHHHHHHCSSEEEEEEETTCCSCHHH-HCHHHHHHHHHHHTTC
T ss_pred CCCCCCCHHHHHHHHHhCCCCeeEEEeCCCCCCcch-hCHHHHHHHHHHHHhc
Confidence 9999999999999999999999 9999999999997 9999999999999965
|
| >4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.9e-30 Score=244.68 Aligned_cols=228 Identities=15% Similarity=0.160 Sum_probs=154.4
Q ss_pred CCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhccc--CCceEE
Q 012188 179 SSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPN--KVKSFH 256 (468)
Q Consensus 179 ~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l--~~~~i~ 256 (468)
++++.|||+||++++...+..+.+.|+ ++||+|+++|+||||.|+... ..++..++++|+ ..+++.+ +.++++
T Consensus 49 G~~~~VlllHG~~~s~~~~~~la~~La---~~Gy~Via~Dl~GhG~S~~~~-~~~~~~~~~~d~-~~~~~~l~~~~~~v~ 123 (281)
T 4fbl_A 49 GSRIGVLVSHGFTGSPQSMRFLAEGFA---RAGYTVATPRLTGHGTTPAEM-AASTASDWTADI-VAAMRWLEERCDVLF 123 (281)
T ss_dssp CSSEEEEEECCTTCCGGGGHHHHHHHH---HTTCEEEECCCTTSSSCHHHH-HTCCHHHHHHHH-HHHHHHHHHHCSEEE
T ss_pred CCCceEEEECCCCCCHHHHHHHHHHHH---HCCCEEEEECCCCCCCCCccc-cCCCHHHHHHHH-HHHHHHHHhCCCeEE
Confidence 445679999999988776667888887 579999999999999996443 246889999998 5777665 457999
Q ss_pred EEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHHhh
Q 012188 257 IVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLIC 336 (468)
Q Consensus 257 lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (468)
|+||||||.+++.+|.++|++|+++|+++|+....... .....................
T Consensus 124 lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~---------------- 182 (281)
T 4fbl_A 124 MTGLSMGGALTVWAAGQFPERFAGIMPINAALRMESPD-----LAALAFNPDAPAELPGIGSDI---------------- 182 (281)
T ss_dssp EEEETHHHHHHHHHHHHSTTTCSEEEEESCCSCCCCHH-----HHHHHTCTTCCSEEECCCCCC----------------
T ss_pred EEEECcchHHHHHHHHhCchhhhhhhcccchhcccchh-----hHHHHHhHhhHHhhhcchhhh----------------
Confidence 99999999999999999999999999999876442111 111111100000000000000
Q ss_pred ccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChhhH
Q 012188 337 KNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECS 416 (468)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~ 416 (468)
..... .+.............+... .......+.++++|+|+|+|++|.++|++.+
T Consensus 183 -------------~~~~~----~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~i~~P~Lii~G~~D~~v~~~~~ 237 (281)
T 4fbl_A 183 -------------KAEGV----KELAYPVTPVPAIKHLITI--------GAVAEMLLPRVKCPALIIQSREDHVVPPHNG 237 (281)
T ss_dssp -------------SSTTC----CCCCCSEEEGGGHHHHHHH--------HHHHHHHGGGCCSCEEEEEESSCSSSCTHHH
T ss_pred -------------hhHHH----HHhhhccCchHHHHHHHHh--------hhhccccccccCCCEEEEEeCCCCCcCHHHH
Confidence 00000 0000000000000000000 1122344578999999999999999999999
Q ss_pred HHHHHhCCC--CeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 417 YNVQRKIPR--ARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 417 ~~l~~~~p~--~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
+.+++.+++ .++++++++||+++++.+++++.+.|.+||++
T Consensus 238 ~~l~~~l~~~~~~l~~~~~~gH~~~~e~~~e~v~~~i~~FL~~ 280 (281)
T 4fbl_A 238 ELIYNGIGSTEKELLWLENSYHVATLDNDKELILERSLAFIRK 280 (281)
T ss_dssp HHHHHHCCCSSEEEEEESSCCSCGGGSTTHHHHHHHHHHHHHT
T ss_pred HHHHHhCCCCCcEEEEECCCCCcCccccCHHHHHHHHHHHHHh
Confidence 999999865 48999999999998745699999999999986
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-28 Score=235.00 Aligned_cols=116 Identities=21% Similarity=0.223 Sum_probs=96.6
Q ss_pred CCCceeEEEecC-CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCC-CCCCHHHHHHHHHHH
Q 012188 168 DCDCKFCTCWSS-SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD-SLYTVREHLDMIEKS 245 (468)
Q Consensus 168 d~~~~~~~~~~~-~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~-~~~t~~~~~~di~~~ 245 (468)
++..++|..+++ ++++|||+||++++..+. .+.+.+. .++|+|+++|+||||.|+.+.. ..++++++++|+ ..
T Consensus 20 ~g~~l~y~~~G~~~g~pvvllHG~~~~~~~~-~~~~~~~---~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl-~~ 94 (313)
T 1azw_A 20 DRHTLYFEQCGNPHGKPVVMLHGGPGGGCND-KMRRFHD---PAKYRIVLFDQRGSGRSTPHADLVDNTTWDLVADI-ER 94 (313)
T ss_dssp SSCEEEEEEEECTTSEEEEEECSTTTTCCCG-GGGGGSC---TTTEEEEEECCTTSTTSBSTTCCTTCCHHHHHHHH-HH
T ss_pred CCCEEEEEecCCCCCCeEEEECCCCCccccH-HHHHhcC---cCcceEEEECCCCCcCCCCCcccccccHHHHHHHH-HH
Confidence 566788888875 467899999987755433 2334342 3799999999999999976543 457999999999 69
Q ss_pred HhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCC
Q 012188 246 VIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPY 288 (468)
Q Consensus 246 l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~ 288 (468)
+++++++++++|+||||||.+|+.+|.++|++|+++|++++..
T Consensus 95 l~~~l~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~~ 137 (313)
T 1azw_A 95 LRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFL 137 (313)
T ss_dssp HHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred HHHHhCCCceEEEEECHHHHHHHHHHHhChhheeEEEEecccc
Confidence 9999999999999999999999999999999999999998754
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-28 Score=235.04 Aligned_cols=270 Identities=16% Similarity=0.147 Sum_probs=160.5
Q ss_pred CCCceeEEEecC-CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCC-CCCCHHHHHHHHHHH
Q 012188 168 DCDCKFCTCWSS-SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD-SLYTVREHLDMIEKS 245 (468)
Q Consensus 168 d~~~~~~~~~~~-~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~-~~~t~~~~~~di~~~ 245 (468)
++..++|..+++ ++++|||+||++++..+. .+.+.+. .++|+|+++|+||||.|+.+.. ..+++.++++|+ ..
T Consensus 23 ~g~~l~~~~~g~~~g~~vvllHG~~~~~~~~-~~~~~~~---~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl-~~ 97 (317)
T 1wm1_A 23 DGHRIYWELSGNPNGKPAVFIHGGPGGGISP-HHRQLFD---PERYKVLLFDQRGCGRSRPHASLDNNTTWHLVADI-ER 97 (317)
T ss_dssp SSCEEEEEEEECTTSEEEEEECCTTTCCCCG-GGGGGSC---TTTEEEEEECCTTSTTCBSTTCCTTCSHHHHHHHH-HH
T ss_pred CCcEEEEEEcCCCCCCcEEEECCCCCcccch-hhhhhcc---ccCCeEEEECCCCCCCCCCCcccccccHHHHHHHH-HH
Confidence 567788888865 467899999987755432 2333332 3799999999999999976543 457999999999 69
Q ss_pred HhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCc-----------hh
Q 012188 246 VIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWP-----------LI 314 (468)
Q Consensus 246 l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~ 314 (468)
+++++++++++|+||||||.+|+.+|.++|++|+++|++++...... ...+... .......+ ..
T Consensus 98 l~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 172 (317)
T 1wm1_A 98 LREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQ----RLHWYYQ-DGASRFFPEKWERVLSILSDD 172 (317)
T ss_dssp HHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHH----HHHHHHT-SSGGGTSHHHHHHHHTTSCTT
T ss_pred HHHHcCCCcEEEEEeCHHHHHHHHHHHHCChheeeeeEeccCCCchh----hhhHHhh-ccchhhcHHHHHHHHhhccch
Confidence 99999999999999999999999999999999999999987542200 0011000 00000000 00
Q ss_pred hhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhcccccc-----chhH----HhhHh-HHHhccccc
Q 012188 315 AFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHT-----HNAA----WHTLH-NIICGTANK 384 (468)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~----~~~~~-~~~~~~~~~ 384 (468)
........+... ................. ...... ....... .... ...+. .........
T Consensus 173 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (317)
T 1wm1_A 173 ERKDVIAAYRQR-------LTSADPQVQLEAAKLWS--VWEGET-VTLLPSRESASFGEDDFALAFARIENHYFTHLGFL 242 (317)
T ss_dssp GGGCHHHHHHHH-------HTCSCHHHHHHHHHHHH--HHHHTT-SSSSCCGGGGGGGCHHHHHHHHHHHHHHHHTGGGC
T ss_pred hhcchHHHHHhh-------hcCCCcccccccccccc--ccccch-hhccCCcccccccccchhhhHHHhhhhhhhccccc
Confidence 000000000000 00000000000000000 000000 0000000 0000 00000 000000000
Q ss_pred ccch-HHHhhccCC-CcEEEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 385 LDGY-LDAVRNHVK-CDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 385 ~~~~-~~~~~~~i~-~PvLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
.... ....+.+++ +|+|+|+|++|.++|++.++.+.+.+|++++++++++||+++.++.++++.+.|.+|+.+
T Consensus 243 ~~~~~~~~~~~~i~~~P~lii~G~~D~~~~~~~~~~l~~~~p~~~~~~i~~~gH~~~~~~~~~~~~~~i~~f~~~ 317 (317)
T 1wm1_A 243 ESDDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAWPEAELHIVEGAGHSYDEPGILHQLMIATDRFAGK 317 (317)
T ss_dssp SSTTHHHHTGGGGTTSCEEEEEETTCSSSCHHHHHHHHHHCTTSEEEEETTCCSSTTSHHHHHHHHHHHHHHTC-
T ss_pred ccchhhHhhcccccCCCEEEEEecCCCCCCHHHHHHHHhhCCCceEEEECCCCCCCCCcchHHHHHHHHHHHhcC
Confidence 0111 233346674 999999999999999999999999999999999999999987534689999999999864
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-28 Score=234.22 Aligned_cols=267 Identities=13% Similarity=0.129 Sum_probs=171.4
Q ss_pred CCCceeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCC---CCCCHHHHHHHHHH
Q 012188 168 DCDCKFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD---SLYTVREHLDMIEK 244 (468)
Q Consensus 168 d~~~~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~---~~~t~~~~~~di~~ 244 (468)
++..++|..+++ +|+|||+||++++...+..+++.|+ ++|+|+++|+||||.|+.+.. ..++++++++++ .
T Consensus 17 ~g~~l~~~~~g~-~~~vv~lHG~~~~~~~~~~~~~~L~----~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~-~ 90 (302)
T 1mj5_A 17 KGRRMAYIDEGT-GDPILFQHGNPTSSYLWRNIMPHCA----GLGRLIACDLIGMGDSDKLDPSGPERYAYAEHRDYL-D 90 (302)
T ss_dssp TTEEEEEEEESC-SSEEEEECCTTCCGGGGTTTGGGGT----TSSEEEEECCTTSTTSCCCSSCSTTSSCHHHHHHHH-H
T ss_pred CCEEEEEEEcCC-CCEEEEECCCCCchhhhHHHHHHhc----cCCeEEEEcCCCCCCCCCCCCCCcccccHHHHHHHH-H
Confidence 566677877764 7999999999988776667888777 679999999999999986642 238999999999 6
Q ss_pred HHhcccCC-ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCC--chhhHHHHHhhcCCCCCchhhhhhhhH
Q 012188 245 SVIEPNKV-KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKG--AQASQYVMRKVAPRRVWPLIAFGASMA 321 (468)
Q Consensus 245 ~l~~~l~~-~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (468)
.+++.++. ++++++||||||.+++.+|.++|++|+++|+++|+....... ............... .. .......
T Consensus 91 ~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~ 167 (302)
T 1mj5_A 91 ALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQA--GE-ELVLQDN 167 (302)
T ss_dssp HHHHHTTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHHSTT--HH-HHHTTTC
T ss_pred HHHHHhCCCceEEEEEECCccHHHHHHHHHCHHHHhheeeecccCCchhhhhhhHHHHHHHHHHhccc--hh-hhhcChH
Confidence 99999999 999999999999999999999999999999999876431110 011111111111000 00 0000000
Q ss_pred HHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccc--------cccchHHHhh
Q 012188 322 CWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTAN--------KLDGYLDAVR 393 (468)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~ 393 (468)
.+.. ...... ..... .......+ ...+.... ............... .........+
T Consensus 168 ~~~~---~~~~~~--~~~~~--------~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 231 (302)
T 1mj5_A 168 VFVE---QVLPGL--ILRPL--------SEAEMAAY-REPFLAAG--EARRPTLSWPRQIPIAGTPADVVAIARDYAGWL 231 (302)
T ss_dssp HHHH---THHHHT--SSSCC--------CHHHHHHH-HGGGCSSS--GGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHH
T ss_pred HHHH---HHHHhc--CcccC--------CHHHHHHH-HHHhhccc--ccccchHHHHHhccccccchhhHHHHHHHHhhh
Confidence 0000 000000 00000 00000000 00000000 000000011100000 0011223445
Q ss_pred ccCCCcEEEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhcCCCC
Q 012188 394 NHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSSSGHE 462 (468)
Q Consensus 394 ~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~~~~ 462 (468)
.++++|+++|+|++|.++|++.++.+.+.+|+ +++++ ++||+++. ++|+++++.|.+|+++.....
T Consensus 232 ~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~-~~gH~~~~-e~p~~~~~~i~~fl~~~~~~~ 297 (302)
T 1mj5_A 232 SESPIPKLFINAEPGALTTGRMRDFCRTWPNQ-TEITV-AGAHFIQE-DSPDEIGAAIAAFVRRLRPAH 297 (302)
T ss_dssp TTCCSCEEEEEEEECSSSSHHHHHHHTTCSSE-EEEEE-EESSCGGG-TCHHHHHHHHHHHHHHHSCCC
T ss_pred hccCCCeEEEEeCCCCCCChHHHHHHHHhcCC-ceEEe-cCcCcccc-cCHHHHHHHHHHHHHhhcccc
Confidence 78899999999999999999999999999999 99999 99999997 899999999999998865544
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-29 Score=240.71 Aligned_cols=268 Identities=13% Similarity=0.102 Sum_probs=162.1
Q ss_pred CCCceeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCC----CCCHHHHHHHHH
Q 012188 168 DCDCKFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDS----LYTVREHLDMIE 243 (468)
Q Consensus 168 d~~~~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~----~~t~~~~~~di~ 243 (468)
++..++|..++ ++|+|||+||++++...+..+++.|. +||+|+++|+||||.|+.+... .++++++++++
T Consensus 21 ~g~~l~~~~~g-~~~~vv~lHG~~~~~~~~~~~~~~l~----~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~- 94 (306)
T 3r40_A 21 SSGRIFARVGG-DGPPLLLLHGFPQTHVMWHRVAPKLA----ERFKVIVADLPGYGWSDMPESDEQHTPYTKRAMAKQL- 94 (306)
T ss_dssp TTCCEEEEEEE-CSSEEEEECCTTCCGGGGGGTHHHHH----TTSEEEEECCTTSTTSCCCCCCTTCGGGSHHHHHHHH-
T ss_pred CCEEEEEEEcC-CCCeEEEECCCCCCHHHHHHHHHHhc----cCCeEEEeCCCCCCCCCCCCCCcccCCCCHHHHHHHH-
Confidence 66778888877 67899999999988776667888888 6999999999999999877753 68999999999
Q ss_pred HHHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHh------hcCCCCCchhhhh
Q 012188 244 KSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRK------VAPRRVWPLIAFG 317 (468)
Q Consensus 244 ~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 317 (468)
..++++++.++++++||||||.+++.+|.++|++|+++|++++......... ........ .............
T Consensus 95 ~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (306)
T 3r40_A 95 IEAMEQLGHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDILPTYEYWQR-MNRAYALKIYHWSFLAQPAPLPENLLG 173 (306)
T ss_dssp HHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCHHHHHHH-CSHHHHHHSTHHHHHTSCTTHHHHHHT
T ss_pred HHHHHHhCCCCEEEEEecchHHHHHHHHHhChhhccEEEEecCCCCccchhh-hhhhhhhhhHHHHHhhcccchHHHHHc
Confidence 6999999999999999999999999999999999999999997432100000 00000000 0000000000000
Q ss_pred hhhHHHHHHHhhHHHHHhhc--cchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhccc-ccccc--hHHHh
Q 012188 318 ASMACWYEHISRTICLLICK--NHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTA-NKLDG--YLDAV 392 (468)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~ 392 (468)
.....+. .......... .........+.+. ..+.. ..........+.... ..... .....
T Consensus 174 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (306)
T 3r40_A 174 GDPDFYV---KAKLASWTRAGDLSAFDPRAVEHYR---------IAFAD---PMRRHVMCEDYRAGAYADFEHDKIDVEA 238 (306)
T ss_dssp SCHHHHH---HHHHHHTSSSSSSTTSCHHHHHHHH---------HHHTS---HHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCHHHHH---HHHhhcccCCCccccCCHHHHHHHH---------HHHcc---CCCcchhhHHHHhcccccchhhhhhhhh
Confidence 0000000 0000000000 0000000000000 00000 000000000000000 00000 00113
Q ss_pred hccCCCcEEEEeeCCCCccC-hhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhcC
Q 012188 393 RNHVKCDVNVFHGEDDELIP-VECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSSS 459 (468)
Q Consensus 393 ~~~i~~PvLii~G~~D~~vp-~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~ 459 (468)
+.++++|+++|+|++|.++| ....+.+.+..|+++++++ ++||+++. ++|+++++.|.+||++..
T Consensus 239 l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~-~~gH~~~~-e~p~~~~~~i~~fl~~~~ 304 (306)
T 3r40_A 239 GNKIPVPMLALWGASGIAQSAATPLDVWRKWASDVQGAPI-ESGHFLPE-EAPDQTAEALVRFFSAAP 304 (306)
T ss_dssp TCCBCSCEEEEEETTCC------CHHHHHHHBSSEEEEEE-SSCSCHHH-HSHHHHHHHHHHHHHC--
T ss_pred ccCCCcceEEEEecCCcccCchhHHHHHHhhcCCCeEEEe-cCCcCchh-hChHHHHHHHHHHHHhcc
Confidence 47889999999999999998 5667777778899999999 68999997 999999999999998753
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.8e-29 Score=234.73 Aligned_cols=254 Identities=11% Similarity=0.139 Sum_probs=166.1
Q ss_pred eEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCC---CCCCHHHHHHHHHHHHhcc
Q 012188 173 FCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD---SLYTVREHLDMIEKSVIEP 249 (468)
Q Consensus 173 ~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~---~~~t~~~~~~di~~~l~~~ 249 (468)
.|..+++++|+|||+||++++...+..+.+.|. +||+|+++|+||||.|+.+.. ...+++++++++ ..+++.
T Consensus 20 ~~~~~g~~~~~vv~lHG~~~~~~~~~~~~~~l~----~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~-~~~~~~ 94 (282)
T 3qvm_A 20 NINITGGGEKTVLLAHGFGCDQNMWRFMLPELE----KQFTVIVFDYVGSGQSDLESFSTKRYSSLEGYAKDV-EEILVA 94 (282)
T ss_dssp TCEEEECSSCEEEEECCTTCCGGGGTTTHHHHH----TTSEEEECCCTTSTTSCGGGCCTTGGGSHHHHHHHH-HHHHHH
T ss_pred ceeecCCCCCeEEEECCCCCCcchHHHHHHHHh----cCceEEEEecCCCCCCCCCCCCccccccHHHHHHHH-HHHHHH
Confidence 345556666999999999988776667888888 699999999999999976542 334899999999 699999
Q ss_pred cCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHH---HHH
Q 012188 250 NKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACW---YEH 326 (468)
Q Consensus 250 l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 326 (468)
++.++++++||||||.+++.+|.++|++++++|+++|........... ...+............ ...
T Consensus 95 ~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~ 164 (282)
T 3qvm_A 95 LDLVNVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDY----------VGGFERDDLEELINLMDKNYIG 164 (282)
T ss_dssp TTCCSEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETTTE----------ECSBCHHHHHHHHHHHHHCHHH
T ss_pred cCCCceEEEEecccHHHHHHHHHhCchhhheEEEecCcchhccCchhh----------hchhccccHHHHHHHHhcchhh
Confidence 999999999999999999999999999999999999875432111000 0000000000000000 000
Q ss_pred HhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeC
Q 012188 327 ISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGE 406 (468)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~ 406 (468)
............... ..........+... .......+..... .......+.++++|+++++|+
T Consensus 165 ~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~-~~~~~~~~~~~~~------~~~~~~~~~~i~~P~l~i~g~ 227 (282)
T 3qvm_A 165 WANYLAPLVMGASHS----------SELIGELSGSFCTT-DPIVAKTFAKATF------FSDYRSLLEDISTPALIFQSA 227 (282)
T ss_dssp HHHHHHHHHHCTTSC----------HHHHHHHHHHHHHS-CHHHHHHHHHHHH------SCBCGGGGGGCCSCEEEEEEE
T ss_pred HHHHHHhhccCCccc----------hhhHHHHHHHHhcC-CcHHHHHHHHHHh------cccHHHHHhcCCCCeEEEEeC
Confidence 000000000000000 00000000000000 0001111111110 011123357889999999999
Q ss_pred CCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhcC
Q 012188 407 DDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSSS 459 (468)
Q Consensus 407 ~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~ 459 (468)
+|.++|.+.++.+.+.+|++++++++++||+++. ++|+++++.|.+||++..
T Consensus 228 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~~~ 279 (282)
T 3qvm_A 228 KDSLASPEVGQYMAENIPNSQLELIQAEGHCLHM-TDAGLITPLLIHFIQNNQ 279 (282)
T ss_dssp ECTTCCHHHHHHHHHHSSSEEEEEEEEESSCHHH-HCHHHHHHHHHHHHHHC-
T ss_pred CCCcCCHHHHHHHHHhCCCCcEEEecCCCCcccc-cCHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999997 899999999999998754
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-28 Score=234.71 Aligned_cols=259 Identities=18% Similarity=0.135 Sum_probs=170.2
Q ss_pred CCCceeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHh
Q 012188 168 DCDCKFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVI 247 (468)
Q Consensus 168 d~~~~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~ 247 (468)
++..+++..+++ +|+||++||++++...+..+.+.|+ ++|+|+++|+||||.|+.+. ..++++++++++ ..++
T Consensus 56 ~~~~~~~~~~g~-~p~vv~lhG~~~~~~~~~~~~~~L~----~~~~v~~~D~~G~G~S~~~~-~~~~~~~~~~dl-~~~l 128 (314)
T 3kxp_A 56 GRITLNVREKGS-GPLMLFFHGITSNSAVFEPLMIRLS----DRFTTIAVDQRGHGLSDKPE-TGYEANDYADDI-AGLI 128 (314)
T ss_dssp SSCEEEEEEECC-SSEEEEECCTTCCGGGGHHHHHTTT----TTSEEEEECCTTSTTSCCCS-SCCSHHHHHHHH-HHHH
T ss_pred CCEEEEEEecCC-CCEEEEECCCCCCHHHHHHHHHHHH----cCCeEEEEeCCCcCCCCCCC-CCCCHHHHHHHH-HHHH
Confidence 556677777665 8999999999887776666777777 68999999999999998443 468999999999 6999
Q ss_pred cccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHH
Q 012188 248 EPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHI 327 (468)
Q Consensus 248 ~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (468)
++++.++++++||||||.+++.+|.++|++++++|++++....... ................ .. .......+
T Consensus 129 ~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~----~~~~~~~~ 200 (314)
T 3kxp_A 129 RTLARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETE---ALDALEARVNAGSQLF-ED----IKAVEAYL 200 (314)
T ss_dssp HHHTSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHH---HHHHHHHHTTTTCSCB-SS----HHHHHHHH
T ss_pred HHhCCCCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCCCCcc---hhhHHHHHhhhchhhh-cC----HHHHHHHH
Confidence 9999999999999999999999999999999999999986533111 1122212111111000 00 00000000
Q ss_pred hhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCC
Q 012188 328 SRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGED 407 (468)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~ 407 (468)
.. . ................... ....+........... .... ........+.++++|+|+++|++
T Consensus 201 ~~----~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~----~~~~~~~~~~~i~~P~Lii~G~~ 265 (314)
T 3kxp_A 201 AG----R---YPNIPADAIRIRAESGYQP-VDGGLRPLASSAAMAQ---TARG----LRSDLVPAYRDVTKPVLIVRGES 265 (314)
T ss_dssp HH----H---STTSCHHHHHHHHHHSEEE-ETTEEEESSCHHHHHH---HHHH----TTSCCHHHHHHCCSCEEEEEETT
T ss_pred Hh----h---cccCchHHHHHHhhhhhcc-cccccccccChhhhhh---hccc----cCcchhhHhhcCCCCEEEEecCC
Confidence 00 0 0000000000000000000 0000000000000000 0000 01122334568899999999999
Q ss_pred CCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 408 DELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 408 D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
|.++|++.++.+.+.+|++++++++++||+++. ++|+++.+.|.+||++
T Consensus 266 D~~~~~~~~~~~~~~~~~~~~~~~~g~gH~~~~-e~~~~~~~~i~~fl~~ 314 (314)
T 3kxp_A 266 SKLVSAAALAKTSRLRPDLPVVVVPGADHYVNE-VSPEITLKAITNFIDA 314 (314)
T ss_dssp CSSSCHHHHHHHHHHCTTSCEEEETTCCSCHHH-HCHHHHHHHHHHHHHC
T ss_pred CccCCHHHHHHHHHhCCCceEEEcCCCCCcchh-hCHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999987 8999999999999974
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-28 Score=231.91 Aligned_cols=261 Identities=12% Similarity=0.106 Sum_probs=169.4
Q ss_pred CCCceeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCC---CCCCHHHHHHHHHH
Q 012188 168 DCDCKFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD---SLYTVREHLDMIEK 244 (468)
Q Consensus 168 d~~~~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~---~~~t~~~~~~di~~ 244 (468)
++..++|..+++ +|+|||+||++++...+..+++.|. ++|+|+++|+||||.|+.+.. ..++++++++++ .
T Consensus 16 ~g~~l~~~~~g~-~~~vv~lHG~~~~~~~~~~~~~~l~----~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~-~ 89 (297)
T 2qvb_A 16 AGKRMAYIDEGK-GDAIVFQHGNPTSSYLWRNIMPHLE----GLGRLVACDLIGMGASDKLSPSGPDRYSYGEQRDFL-F 89 (297)
T ss_dssp TTEEEEEEEESS-SSEEEEECCTTCCGGGGTTTGGGGT----TSSEEEEECCTTSTTSCCCSSCSTTSSCHHHHHHHH-H
T ss_pred CCEEEEEEecCC-CCeEEEECCCCchHHHHHHHHHHHh----hcCeEEEEcCCCCCCCCCCCCccccCcCHHHHHHHH-H
Confidence 566677777764 7999999999988776667788777 679999999999999986642 228999999999 6
Q ss_pred HHhcccCC-ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCC--CchhhHHHHHhhcCCCCCchhhhhhhhH
Q 012188 245 SVIEPNKV-KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPK--GAQASQYVMRKVAPRRVWPLIAFGASMA 321 (468)
Q Consensus 245 ~l~~~l~~-~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (468)
.+++.++. ++++++||||||.+++.+|.++|++|+++|+++|....... ................ . ..
T Consensus 90 ~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~------ 160 (297)
T 2qvb_A 90 ALWDALDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMTWADWPPAVRGVFQGFRSPQ--G-EP------ 160 (297)
T ss_dssp HHHHHTTCCSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHTSTT--H-HH------
T ss_pred HHHHHcCCCCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccCCccCCCCChHHHHHHHHHhccc--c-hh------
Confidence 99999999 99999999999999999999999999999999987643111 1111111111111100 0 00
Q ss_pred HHHHHHhhHHHHHhhc--cchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccc--------cccchHHH
Q 012188 322 CWYEHISRTICLLICK--NHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTAN--------KLDGYLDA 391 (468)
Q Consensus 322 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 391 (468)
............... .... .......+. ..+.... ............... ........
T Consensus 161 -~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (297)
T 2qvb_A 161 -MALEHNIFVERVLPGAILRQL--------SDEEMNHYR-RPFVNGG--EDRRPTLSWPRNLPIDGEPAEVVALVNEYRS 228 (297)
T ss_dssp -HHHTTCHHHHTHHHHTCSSCC--------CHHHHHHHH-GGGCSSS--GGGHHHHHHHHHSCBTTBSHHHHHHHHHHHH
T ss_pred -hhccccHHHHHHHhccccccC--------CHHHHHHHH-HHhcCcc--cchhhHHHHHHhccccCCchhhHHHHHHHHh
Confidence 000000000000000 0000 000000000 0000000 000000011100000 01112234
Q ss_pred hhccCCCcEEEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 392 VRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 392 ~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
.+.++++|+|+++|++|.++|.+.++.+.+.+|+ +++++ ++||+++. ++|+++++.|.+||++.
T Consensus 229 ~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~-~~~~~-~~gH~~~~-~~p~~~~~~i~~fl~~~ 292 (297)
T 2qvb_A 229 WLEETDMPKLFINAEPGAIITGRIRDYVRSWPNQ-TEITV-PGVHFVQE-DSPEEIGAAIAQFVRRL 292 (297)
T ss_dssp HHHHCCSCEEEEEEEECSSSCHHHHHHHHTSSSE-EEEEE-EESSCGGG-TCHHHHHHHHHHHHHHH
T ss_pred hcccccccEEEEecCCCCcCCHHHHHHHHHHcCC-eEEEe-cCccchhh-hCHHHHHHHHHHHHHHH
Confidence 4578899999999999999999999999999999 99999 99999997 99999999999999864
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-28 Score=229.09 Aligned_cols=228 Identities=13% Similarity=0.160 Sum_probs=150.7
Q ss_pred CCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHH--HHHhcccCCceEE
Q 012188 179 SSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIE--KSVIEPNKVKSFH 256 (468)
Q Consensus 179 ~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~--~~l~~~l~~~~i~ 256 (468)
+++|+|||+||++++...|..+.+.|+ ++||+|+++|+||||.|+.+. ..++++++++++. ..++++++.++++
T Consensus 14 ~~~~~vvllHG~~~~~~~~~~~~~~L~---~~g~~vi~~D~~GhG~s~~~~-~~~~~~~~~~d~~~~~~~l~~~~~~~~~ 89 (247)
T 1tqh_A 14 AGERAVLLLHGFTGNSADVRMLGRFLE---SKGYTCHAPIYKGHGVPPEEL-VHTGPDDWWQDVMNGYEFLKNKGYEKIA 89 (247)
T ss_dssp CSSCEEEEECCTTCCTHHHHHHHHHHH---HTTCEEEECCCTTSSSCHHHH-TTCCHHHHHHHHHHHHHHHHHHTCCCEE
T ss_pred CCCcEEEEECCCCCChHHHHHHHHHHH---HCCCEEEecccCCCCCCHHHh-cCCCHHHHHHHHHHHHHHHHHcCCCeEE
Confidence 456899999999887776666888885 368999999999999775322 2468888877762 2456777889999
Q ss_pred EEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHHhh
Q 012188 257 IVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLIC 336 (468)
Q Consensus 257 lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (468)
|+||||||.+|+.+|.++| |+++|+++++..... ....... ...+...+.. ...
T Consensus 90 lvG~SmGG~ia~~~a~~~p--v~~lvl~~~~~~~~~-----~~~~~~~---------------~~~~~~~~~~----~~~ 143 (247)
T 1tqh_A 90 VAGLSLGGVFSLKLGYTVP--IEGIVTMCAPMYIKS-----EETMYEG---------------VLEYAREYKK----REG 143 (247)
T ss_dssp EEEETHHHHHHHHHHTTSC--CSCEEEESCCSSCCC-----HHHHHHH---------------HHHHHHHHHH----HHT
T ss_pred EEEeCHHHHHHHHHHHhCC--CCeEEEEcceeecCc-----chhhhHH---------------HHHHHHHhhc----ccc
Confidence 9999999999999999999 999999876543211 0000000 0000000000 000
Q ss_pred ccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChhhH
Q 012188 337 KNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECS 416 (468)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~ 416 (468)
.. .+..... ... +... .......+... .......+.++++|+|+|+|++|.++|++.+
T Consensus 144 ~~---~~~~~~~-----~~~-----~~~~-~~~~~~~~~~~--------~~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~ 201 (247)
T 1tqh_A 144 KS---EEQIEQE-----MEK-----FKQT-PMKTLKALQEL--------IADVRDHLDLIYAPTFVVQARHDEMINPDSA 201 (247)
T ss_dssp CC---HHHHHHH-----HHH-----HTTS-CCTTHHHHHHH--------HHHHHHTGGGCCSCEEEEEETTCSSSCTTHH
T ss_pred cc---hHHHHhh-----hhc-----ccCC-CHHHHHHHHHH--------HHHHHhhcccCCCCEEEEecCCCCCCCcchH
Confidence 00 0000000 000 0000 00000011100 0123344578899999999999999999999
Q ss_pred HHHHHhCCC--CeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 417 YNVQRKIPR--ARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 417 ~~l~~~~p~--~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
+.+.+.+|+ +++++++++||+++.++.|+++++.|.+||++.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~i~~Fl~~~ 245 (247)
T 1tqh_A 202 NIIYNEIESPVKQIKWYEQSGHVITLDQEKDQLHEDIYAFLESL 245 (247)
T ss_dssp HHHHHHCCCSSEEEEEETTCCSSGGGSTTHHHHHHHHHHHHHHS
T ss_pred HHHHHhcCCCceEEEEeCCCceeeccCccHHHHHHHHHHHHHhc
Confidence 999999987 599999999999998335899999999999864
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-28 Score=233.49 Aligned_cols=248 Identities=18% Similarity=0.213 Sum_probs=162.3
Q ss_pred CCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceEEEE
Q 012188 179 SSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIV 258 (468)
Q Consensus 179 ~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i~lv 258 (468)
+++|+|||+||++++...+..+.+.|. ++||+|+++|+||||.|+.+....++++++++++ ..+++.++.++++++
T Consensus 44 ~~~p~vv~~hG~~~~~~~~~~~~~~l~---~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~ 119 (315)
T 4f0j_A 44 ANGRTILLMHGKNFCAGTWERTIDVLA---DAGYRVIAVDQVGFCKSSKPAHYQYSFQQLAANT-HALLERLGVARASVI 119 (315)
T ss_dssp CCSCEEEEECCTTCCGGGGHHHHHHHH---HTTCEEEEECCTTSTTSCCCSSCCCCHHHHHHHH-HHHHHHTTCSCEEEE
T ss_pred CCCCeEEEEcCCCCcchHHHHHHHHHH---HCCCeEEEeecCCCCCCCCCCccccCHHHHHHHH-HHHHHHhCCCceEEE
Confidence 567899999999988777767888887 4689999999999999988776678999999999 699999999999999
Q ss_pred EEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCC----chhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHH
Q 012188 259 AHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKG----AQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLL 334 (468)
Q Consensus 259 GhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (468)
||||||.+++.+|.++|++++++|+++|+....... .............. . ...........
T Consensus 120 G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~----~~~~~~~~~~~ 185 (315)
T 4f0j_A 120 GHSMGGMLATRYALLYPRQVERLVLVNPIGLEDWKALGVPWRSVDDWYRRDLQT----------S----AEGIRQYQQAT 185 (315)
T ss_dssp EETHHHHHHHHHHHHCGGGEEEEEEESCSCSSCHHHHTCCCCCHHHHHHHHTTC----------C----HHHHHHHHHHH
T ss_pred EecHHHHHHHHHHHhCcHhhheeEEecCcccCCcccccchhhhhHHHHhhcccC----------C----hHHHHHHHHHH
Confidence 999999999999999999999999999864321000 00000000000000 0 00000000000
Q ss_pred hhcc--chhHHHHHHHHhhhHHHHHhhhccccccc-hhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCcc
Q 012188 335 ICKN--HRVWEFLAKLVTRNRIRTFLLEGFFCHTH-NAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELI 411 (468)
Q Consensus 335 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~v 411 (468)
.... ........... ......... ...+....... ..........+.++++|+++++|++|.++
T Consensus 186 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~~P~lii~G~~D~~~ 252 (315)
T 4f0j_A 186 YYAGEWRPEFDRWVQMQ---------AGMYRGKGRESVAWNSALTYD----MIFTQPVVYELDRLQMPTLLLIGEKDNTA 252 (315)
T ss_dssp TSTTCCCGGGHHHHHHH---------HHHTTSTTHHHHHHHHHHHHH----HHHHCCCGGGGGGCCSCEEEEEETTCCCC
T ss_pred HhccccCCchHHHHHHH---------HHHhhccCcchhhHHHHHhcC----ccccchhhhhcccCCCCeEEEEecCCCcC
Confidence 0000 00000000000 000000000 00000000000 00001112235788999999999999999
Q ss_pred C----------------hhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 412 P----------------VECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 412 p----------------~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
| .+.++.+.+.+|++++++++++||+++. ++|+++++.|.+||++.
T Consensus 253 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~p~~~~~~i~~fl~~~ 314 (315)
T 4f0j_A 253 IGKDAAPAELKARLGNYAQLGKDAARRIPQATLVEFPDLGHTPQI-QAPERFHQALLEGLQTQ 314 (315)
T ss_dssp TTGGGSCHHHHTTSCCHHHHHHHHHHHSTTEEEEEETTCCSCHHH-HSHHHHHHHHHHHHCC-
T ss_pred ccccccccccccccccchhhhhHHHhhcCCceEEEeCCCCcchhh-hCHHHHHHHHHHHhccC
Confidence 9 7888999999999999999999999997 89999999999999764
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=9.5e-29 Score=230.88 Aligned_cols=250 Identities=14% Similarity=0.028 Sum_probs=161.0
Q ss_pred CCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccC-CceEEE
Q 012188 179 SSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNK-VKSFHI 257 (468)
Q Consensus 179 ~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~-~~~i~l 257 (468)
.++|+|||+||++++...|..+.+.|. ++||+|+++|+||||.|+.+....++++++++++ ..+++.++ .++++|
T Consensus 10 ~~~~~vvllHG~~~~~~~~~~~~~~l~---~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~-~~~l~~l~~~~~~~l 85 (267)
T 3sty_A 10 FVKKHFVLVHAAFHGAWCWYKIVALMR---SSGHNVTALDLGASGINPKQALQIPNFSDYLSPL-MEFMASLPANEKIIL 85 (267)
T ss_dssp CCCCEEEEECCTTCCGGGGHHHHHHHH---HTTCEEEEECCTTSTTCSCCGGGCCSHHHHHHHH-HHHHHTSCTTSCEEE
T ss_pred CCCCeEEEECCCCCCcchHHHHHHHHH---hcCCeEEEeccccCCCCCCcCCccCCHHHHHHHH-HHHHHhcCCCCCEEE
Confidence 457899999999987776667888887 3589999999999999988765568999999999 69999984 899999
Q ss_pred EEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhh-cCCCCCchhhhh--hhhHHHHHHHhhHHHHH
Q 012188 258 VAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKV-APRRVWPLIAFG--ASMACWYEHISRTICLL 334 (468)
Q Consensus 258 vGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 334 (468)
+||||||.+++.+|.++|++|+++|+++++....... ........ .....|....+. .......
T Consensus 86 vGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 152 (267)
T 3sty_A 86 VGHALGGLAISKAMETFPEKISVAVFLSGLMPGPNID---ATTVCTKAGSAVLGQLDNCVTYENGPTNPP---------- 152 (267)
T ss_dssp EEETTHHHHHHHHHHHSGGGEEEEEEESCCCCBTTBC---HHHHHHHHHHTTTTCTTCEEECTTCTTSCC----------
T ss_pred EEEcHHHHHHHHHHHhChhhcceEEEecCCCCCCcch---HHHHHHHhcccchhhhhhhhhhhhhhhccc----------
Confidence 9999999999999999999999999999876443222 11111111 011111100000 0000000
Q ss_pred hhccchhHHHHHHHHhh---hHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCcc
Q 012188 335 ICKNHRVWEFLAKLVTR---NRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELI 411 (468)
Q Consensus 335 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~v 411 (468)
.......+.....+.. ............. ..... +..+...... . .....++|+++|+|++|.++
T Consensus 153 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~--~-----~~~~~~~P~l~i~g~~D~~~ 220 (267)
T 3sty_A 153 -TTLIAGPKFLATNVYHLSPIEDLALATALVRP-LYLYL---AEDISKEVVL--S-----SKRYGSVKRVFIVATENDAL 220 (267)
T ss_dssp -CEEECCHHHHHHHTSTTSCHHHHHHHHHHCCC-EECCC---HHHHHHHCCC--C-----TTTGGGSCEEEEECCCSCHH
T ss_pred -chhhhhHHHHHHhhcccCCHHHHHHHHHhhcc-chhHH---HHHhhcchhc--c-----cccccCCCEEEEEeCCCCcc
Confidence 0000000000000000 0000000000000 00000 0000000000 0 00112699999999999999
Q ss_pred ChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 412 PVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 412 p~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
|++..+.+.+.+|++++++++++||++++ ++|+++++.|.+|+++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~ 266 (267)
T 3sty_A 221 KKEFLKLMIEKNPPDEVKEIEGSDHVTMM-SKPQQLFTTLLSIANKY 266 (267)
T ss_dssp HHHHHHHHHHHSCCSEEEECTTCCSCHHH-HSHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHhCCCceEEEeCCCCccccc-cChHHHHHHHHHHHHhc
Confidence 99999999999999999999999999998 99999999999999863
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-28 Score=228.23 Aligned_cols=229 Identities=13% Similarity=0.093 Sum_probs=157.4
Q ss_pred CCCceeEEEecC-----CCCeEEEEecCCCC--ccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHH
Q 012188 168 DCDCKFCTCWSS-----SSRDTLFVKTQGPS--AFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLD 240 (468)
Q Consensus 168 d~~~~~~~~~~~-----~~p~vl~lHG~g~s--~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~ 240 (468)
|+..+.+..|.+ ++|+|||+||++++ ...+..+.+.|. ++||+|+++|+||||.|+.+. ..+++.++++
T Consensus 9 ~g~~l~~~~~~p~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~l~---~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~~ 84 (251)
T 2wtm_A 9 DGIKLNAYLDMPKNNPEKCPLCIIIHGFTGHSEERHIVAVQETLN---EIGVATLRADMYGHGKSDGKF-EDHTLFKWLT 84 (251)
T ss_dssp TTEEEEEEEECCTTCCSSEEEEEEECCTTCCTTSHHHHHHHHHHH---HTTCEEEEECCTTSTTSSSCG-GGCCHHHHHH
T ss_pred CCcEEEEEEEccCCCCCCCCEEEEEcCCCcccccccHHHHHHHHH---HCCCEEEEecCCCCCCCCCcc-ccCCHHHHHH
Confidence 555566666643 34789999999987 655666777776 479999999999999998654 3468888888
Q ss_pred HHHHHHhccc----CCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhh
Q 012188 241 MIEKSVIEPN----KVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAF 316 (468)
Q Consensus 241 di~~~l~~~l----~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
|+ ..+++.+ +.++++++||||||.+++.+|.++|++|+++|+++|.... .............+.....
T Consensus 85 d~-~~~~~~l~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~-------~~~~~~~~~~~~~~~~~~~ 156 (251)
T 2wtm_A 85 NI-LAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMI-------PEIARTGELLGLKFDPENI 156 (251)
T ss_dssp HH-HHHHHHHTTCTTEEEEEEEEETHHHHHHHHHHHHTTTTEEEEEEESCCTTH-------HHHHHHTEETTEECBTTBC
T ss_pred HH-HHHHHHHHcCcccceEEEEEECcchHHHHHHHHhCcccceEEEEECcHHHh-------HHHHhhhhhccccCCchhc
Confidence 88 5666655 3579999999999999999999999999999999976421 1111110000000000000
Q ss_pred hhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccC
Q 012188 317 GASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHV 396 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 396 (468)
..... .+........+ .... . .......+.++
T Consensus 157 ~~~~~---------------------------------------~~~~~~~~~~~--~~~~-~------~~~~~~~~~~i 188 (251)
T 2wtm_A 157 PDELD---------------------------------------AWDGRKLKGNY--VRVA-Q------TIRVEDFVDKY 188 (251)
T ss_dssp CSEEE---------------------------------------ETTTEEEETHH--HHHH-T------TCCHHHHHHHC
T ss_pred chHHh---------------------------------------hhhccccchHH--HHHH-H------ccCHHHHHHhc
Confidence 00000 00000000000 0000 0 01122334678
Q ss_pred CCcEEEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 397 KCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 397 ~~PvLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
++|+|+++|++|.++|++.++.+.+.+|++++++++++||++ . ++|+++.+.|.+||++.
T Consensus 189 ~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~-~-~~~~~~~~~i~~fl~~~ 248 (251)
T 2wtm_A 189 TKPVLIVHGDQDEAVPYEASVAFSKQYKNCKLVTIPGDTHCY-D-HHLELVTEAVKEFMLEQ 248 (251)
T ss_dssp CSCEEEEEETTCSSSCHHHHHHHHHHSSSEEEEEETTCCTTC-T-TTHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCcChHHHHHHHHhCCCcEEEEECCCCccc-c-hhHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999 6 99999999999999763
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.5e-28 Score=227.44 Aligned_cols=267 Identities=16% Similarity=0.164 Sum_probs=170.1
Q ss_pred CCCceeEEEecC-CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCC-CCCCHHHHHHHHHHH
Q 012188 168 DCDCKFCTCWSS-SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD-SLYTVREHLDMIEKS 245 (468)
Q Consensus 168 d~~~~~~~~~~~-~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~-~~~t~~~~~~di~~~ 245 (468)
++..++|..|++ ++|+||++||++++...+..+.+.|. ++||+|+++|+||||.|+.+.. ..++++++++++ ..
T Consensus 12 ~g~~l~~~~~g~~~~~~vv~~hG~~~~~~~~~~~~~~l~---~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~-~~ 87 (286)
T 3qit_A 12 GGNQICLCSWGSPEHPVVLCIHGILEQGLAWQEVALPLA---AQGYRVVAPDLFGHGRSSHLEMVTSYSSLTFLAQI-DR 87 (286)
T ss_dssp TTEEEEEEEESCTTSCEEEEECCTTCCGGGGHHHHHHHH---HTTCEEEEECCTTSTTSCCCSSGGGCSHHHHHHHH-HH
T ss_pred CCceEEEeecCCCCCCEEEEECCCCcccchHHHHHHHhh---hcCeEEEEECCCCCCCCCCCCCCCCcCHHHHHHHH-HH
Confidence 667788888865 57899999999988776667778777 4689999999999999987663 568999999999 69
Q ss_pred HhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCC-chhhHHHHH---hhcCCCCCchhhhhhhhH
Q 012188 246 VIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKG-AQASQYVMR---KVAPRRVWPLIAFGASMA 321 (468)
Q Consensus 246 l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 321 (468)
++++++.++++++||||||.+++.+|.++|++|+++|+++++....... ......... ............ ...
T Consensus 88 ~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 164 (286)
T 3qit_A 88 VIQELPDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESKKESAVNQLTTCLDYLSSTPQHPIFP---DVA 164 (286)
T ss_dssp HHHHSCSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCC---CCHHHHHHHHHHHHTCCCCCCCBS---SHH
T ss_pred HHHhcCCCCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCCCccccchhhhHHHHHHHHHHhccccccccc---cHH
Confidence 9999999999999999999999999999999999999999876553332 111111111 111111100000 000
Q ss_pred HHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhc-ccccccchHHHhhccCCCcE
Q 012188 322 CWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICG-TANKLDGYLDAVRNHVKCDV 400 (468)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~Pv 400 (468)
........ . ................... ....+....... . ........ ............+.++++|+
T Consensus 165 ~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~i~~P~ 234 (286)
T 3qit_A 165 TAASRLRQ---A----IPSLSEEFSYILAQRITQP-NQGGVRWSWDAI-I-RTRSILGLNNLPGGRSQYLEMLKSIQVPT 234 (286)
T ss_dssp HHHHHHHH---H----STTSCHHHHHHHHHHTEEE-ETTEEEECSCGG-G-GGHHHHTTTSCTTHHHHHHHHHHHCCSCE
T ss_pred HHHHHhhc---C----CcccCHHHHHHHhhccccc-cccceeeeechh-h-hccccccccccccchhHHHHHHhccCCCe
Confidence 00000000 0 0000000000000000000 000000000000 0 00000000 00001223344457889999
Q ss_pred EEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHH
Q 012188 401 NVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEE 453 (468)
Q Consensus 401 Lii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~ 453 (468)
++++|++|.++|.+..+.+.+.+|+++++++++ ||+++. ++|+++++.|.+
T Consensus 235 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~-e~p~~~~~~i~~ 285 (286)
T 3qit_A 235 TLVYGDSSKLNRPEDLQQQKMTMTQAKRVFLSG-GHNLHI-DAAAALASLILT 285 (286)
T ss_dssp EEEEETTCCSSCHHHHHHHHHHSTTSEEEEESS-SSCHHH-HTHHHHHHHHHC
T ss_pred EEEEeCCCcccCHHHHHHHHHHCCCCeEEEeeC-CchHhh-hChHHHHHHhhc
Confidence 999999999999999999999999999999999 999997 999999998864
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-28 Score=241.07 Aligned_cols=286 Identities=15% Similarity=0.171 Sum_probs=164.4
Q ss_pred CCceeEEEecC----CCCeEEEEecCCCCcc-------------chhhhhhhccccCCCcceEEEECCCCCCCCCC----
Q 012188 169 CDCKFCTCWSS----SSRDTLFVKTQGPSAF-------------WTETLFPNFSSASKSTYRLFAIDLLGFGRSPK---- 227 (468)
Q Consensus 169 ~~~~~~~~~~~----~~p~vl~lHG~g~s~~-------------~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~---- 227 (468)
+..++|..|++ ++|+|||+||++++.. ||..++.....++++||+|+++|+||||.|++
T Consensus 26 ~~~i~y~~~g~~~~~~~p~vll~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~G~S~G~~~g 105 (377)
T 3i1i_A 26 PVQMGYETYGTLNRERSNVILICHYFSATSHAAGKYTAHDEESGWWDGLIGPGKAIDTNQYFVICTDNLCNVQVKNPHVI 105 (377)
T ss_dssp EEEEEEEEESCCCTTCCCEEEEECCTTCCSCCSSCSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSCTTSTTCC
T ss_pred eeeEEEEeecccCCCCCCEEEEeccccCcchhccccccccccccchhhhcCCCCccccccEEEEEecccccccccCCCcc
Confidence 34567888863 3478999999988643 35556621112225899999999999987541
Q ss_pred ---CCC-------------CCCCHHHHHHHHHHHHhcccCCceEE-EEEEcccHHHHHHHHHhCCCccceEEE-ecCCCC
Q 012188 228 ---PTD-------------SLYTVREHLDMIEKSVIEPNKVKSFH-IVAHSLGCILALALAVKHPGSVKSLTL-LAPPYY 289 (468)
Q Consensus 228 ---~~~-------------~~~t~~~~~~di~~~l~~~l~~~~i~-lvGhS~Gg~ial~~a~~~p~~v~~lVl-~~p~~~ 289 (468)
+.. ..++++++++++ ..++++++.++++ |+||||||.+|+.+|.++|++|+++|+ ++++..
T Consensus 106 ~~g~~~~~p~~~~~~~~~~~~~~~~~~~~d~-~~~l~~l~~~~~~ilvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 184 (377)
T 3i1i_A 106 TTGPKSINPKTGDEYAMDFPVFTFLDVARMQ-CELIKDMGIARLHAVMGPSAGGMIAQQWAVHYPHMVERMIGVITNPQN 184 (377)
T ss_dssp CCSTTSBCTTTSSBCGGGSCCCCHHHHHHHH-HHHHHHTTCCCBSEEEEETHHHHHHHHHHHHCTTTBSEEEEESCCSBC
T ss_pred cCCCCCCCCCCCCcccCCCCCCCHHHHHHHH-HHHHHHcCCCcEeeEEeeCHhHHHHHHHHHHChHHHHHhcccCcCCCc
Confidence 110 157999999999 6999999999996 999999999999999999999999999 766543
Q ss_pred CCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhh--------------hHHH
Q 012188 290 PVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTR--------------NRIR 355 (468)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~ 355 (468)
..+............+.....|....+............+......... ...+...+.. ....
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (377)
T 3i1i_A 185 PIITSVNVAQNAIEAIRLDPSWKGGKYGEEQPMKGLQLANRMMFMNAFD---EHFYETTYPRNSIEVEPYEKVSSLTSFE 261 (377)
T ss_dssp CHHHHHHTTHHHHHHHHHSGGGGGGCCTTSCCHHHHHHHHHHHHTTSSC---HHHHHHHSCCCSSCCGGGTCTTCCCHHH
T ss_pred CCchhhHHHHHHHHHHhcCCCccCCccccCCccchHHHHHHHHhhhcCC---HHHHHHHhhhhhccccccccccchhHHH
Confidence 2110000000001111000001000000000000000000000000000 0000000000 0000
Q ss_pred HHh---hhccccccchhHHhhHhHHHhc-ccccccchHHHhhccCCCcEEEEeeCCCCccChhhHHHHHHhC----CCCe
Q 012188 356 TFL---LEGFFCHTHNAAWHTLHNIICG-TANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKI----PRAR 427 (468)
Q Consensus 356 ~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~----p~~~ 427 (468)
.++ ............+......+.. ........+...+.++++|+|+|+|++|.++|++.++.+.+.+ |+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~g~~~~ 341 (377)
T 3i1i_A 262 KEINKLTYRSIELVDANSWMYTAKAVLLHDIAHGFSSLEEALSNVEANVLMIPCKQDLLQPSRYNYKMVDLLQKQGKYAE 341 (377)
T ss_dssp HHHHHHHHHTTTTCCHHHHHHHHHHHHHCBTTTTSSCHHHHHHTCCSEEEEECBTTCSSSCTHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHhhhhcccCHHHHHHHHHHHhhcccccccCCHHHHHhhCCCCEEEEecCCccccCHHHHHHHHHHHHhcCCCce
Confidence 000 0000000111111111111110 0000112334456789999999999999999999999999999 9999
Q ss_pred EEEecC-CCccccccCcHHHHHHHHHHHHhhcC
Q 012188 428 VKVIEK-KDHITIVVGRQKTFARELEEIWRSSS 459 (468)
Q Consensus 428 l~~i~~-~gH~~~~~e~p~~~~~~i~~fl~~~~ 459 (468)
++++++ +||+++. ++|+++++.|.+||++..
T Consensus 342 ~~~i~~~~gH~~~~-e~p~~~~~~i~~fl~~~~ 373 (377)
T 3i1i_A 342 VYEIESINGHMAGV-FDIHLFEKKVYEFLNRKV 373 (377)
T ss_dssp ECCBCCTTGGGHHH-HCGGGTHHHHHHHHHSCC
T ss_pred EEEcCCCCCCcchh-cCHHHHHHHHHHHHHhhh
Confidence 999998 9999997 899999999999998753
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-28 Score=231.90 Aligned_cols=254 Identities=10% Similarity=0.063 Sum_probs=161.6
Q ss_pred CCCceeEEEecC---CCCeEEEEecCCCCcc-chhh-----hhhhccccCCCcceEEEECCCCCCCCCCCCCCC---CCH
Q 012188 168 DCDCKFCTCWSS---SSRDTLFVKTQGPSAF-WTET-----LFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSL---YTV 235 (468)
Q Consensus 168 d~~~~~~~~~~~---~~p~vl~lHG~g~s~~-~~~~-----~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~---~t~ 235 (468)
++..++|..+++ ++|+|||+||++++.. |+.. +.+.|+ ++|+|+++|+||||.|....... +++
T Consensus 19 ~~~~l~y~~~G~~~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~L~----~~~~vi~~D~~G~G~s~~~~~~~~~~~~~ 94 (286)
T 2qmq_A 19 PYGSVTFTVYGTPKPKRPAIFTYHDVGLNYKSCFQPLFRFGDMQEII----QNFVRVHVDAPGMEEGAPVFPLGYQYPSL 94 (286)
T ss_dssp TTEEEEEEEESCCCTTCCEEEEECCTTCCHHHHHHHHHTSHHHHHHH----TTSCEEEEECTTTSTTCCCCCTTCCCCCH
T ss_pred CCeEEEEEeccCCCCCCCeEEEeCCCCCCchhhhhhhhhhchhHHHh----cCCCEEEecCCCCCCCCCCCCCCCCccCH
Confidence 556688888876 5799999999998765 3443 567776 68999999999999986543222 499
Q ss_pred HHHHHHHHHHHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhh
Q 012188 236 REHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIA 315 (468)
Q Consensus 236 ~~~~~di~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (468)
+++++++ ..+++.++.++++++||||||.+++.+|.++|++|+++|+++++...... ........... ..
T Consensus 95 ~~~~~~l-~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~----~~~~~~~~~~~--~~--- 164 (286)
T 2qmq_A 95 DQLADMI-PCILQYLNFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAKGW----MDWAAHKLTGL--TS--- 164 (286)
T ss_dssp HHHHHTH-HHHHHHHTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCH----HHHHHHHHHHT--TS---
T ss_pred HHHHHHH-HHHHHHhCCCcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCCcccch----hhhhhhhhccc--cc---
Confidence 9999999 69999999999999999999999999999999999999999986533111 11111100000 00
Q ss_pred hhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhcc
Q 012188 316 FGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNH 395 (468)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (468)
............. ..........+... ..+...........+...+..... .. .....+.+
T Consensus 165 --~~~~~~~~~~~~~--~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~l~~ 225 (286)
T 2qmq_A 165 --SIPDMILGHLFSQ--EELSGNSELIQKYR-------------GIIQHAPNLENIELYWNSYNNRRD-LN-FERGGETT 225 (286)
T ss_dssp --CHHHHHHHHHSCH--HHHHTTCHHHHHHH-------------HHHHTCTTHHHHHHHHHHHHTCCC-CC-SEETTEEC
T ss_pred --cchHHHHHHHhcC--CCCCcchHHHHHHH-------------HHHHhcCCcchHHHHHHHHhhhhh-hh-hhhchhcc
Confidence 0000000000000 00000000001000 000000001111111111111100 00 01123478
Q ss_pred CCCcEEEEeeCCCCccChhhHHHHHHhCC-CCeEEEecCCCccccccCcHHHHHHHHHHHHh
Q 012188 396 VKCDVNVFHGEDDELIPVECSYNVQRKIP-RARVKVIEKKDHITIVVGRQKTFARELEEIWR 456 (468)
Q Consensus 396 i~~PvLii~G~~D~~vp~~~~~~l~~~~p-~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~ 456 (468)
+++|+|+|+|++|.++| ...+.+.+..| ++++++++++||+++. ++|+++++.|.+||+
T Consensus 226 i~~P~lii~G~~D~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~ 285 (286)
T 2qmq_A 226 LKCPVMLVVGDQAPHED-AVVECNSKLDPTQTSFLKMADSGGQPQL-TQPGKLTEAFKYFLQ 285 (286)
T ss_dssp CCSCEEEEEETTSTTHH-HHHHHHHHSCGGGEEEEEETTCTTCHHH-HCHHHHHHHHHHHHC
T ss_pred CCCCEEEEecCCCcccc-HHHHHHHHhcCCCceEEEeCCCCCcccc-cChHHHHHHHHHHhc
Confidence 89999999999999998 45666666777 8999999999999997 899999999999995
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.96 E-value=9.2e-28 Score=229.91 Aligned_cols=250 Identities=13% Similarity=0.151 Sum_probs=166.1
Q ss_pred CCceeEEEecC-CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCC-CCCCCCCCCCCCHHHHHHHHHHHH
Q 012188 169 CDCKFCTCWSS-SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGF-GRSPKPTDSLYTVREHLDMIEKSV 246 (468)
Q Consensus 169 ~~~~~~~~~~~-~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~-G~S~~~~~~~~t~~~~~~di~~~l 246 (468)
+..++++.+++ ++|+|||+||++++...|..+++.|+ +||+|+++|+||| |.|..+. ..++++++++++ ..+
T Consensus 54 ~~~~~~~~~g~~~~~~vv~lHG~~~~~~~~~~~~~~L~----~g~~vi~~D~~G~gG~s~~~~-~~~~~~~~~~~l-~~~ 127 (306)
T 2r11_A 54 FGQTHVIASGPEDAPPLVLLHGALFSSTMWYPNIADWS----SKYRTYAVDIIGDKNKSIPEN-VSGTRTDYANWL-LDV 127 (306)
T ss_dssp TEEEEEEEESCTTSCEEEEECCTTTCGGGGTTTHHHHH----HHSEEEEECCTTSSSSCEECS-CCCCHHHHHHHH-HHH
T ss_pred CceEEEEeeCCCCCCeEEEECCCCCCHHHHHHHHHHHh----cCCEEEEecCCCCCCCCCCCC-CCCCHHHHHHHH-HHH
Confidence 44677777765 57899999999987776666888887 6999999999999 8886643 357999999999 699
Q ss_pred hcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHH
Q 012188 247 IEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEH 326 (468)
Q Consensus 247 ~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (468)
++.++.++++|+||||||.+++.+|.++|++|+++|+++|........ .... ....+... . . +...
T Consensus 128 l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~---~~~~-~~~~~~~~-~------~---~~~~ 193 (306)
T 2r11_A 128 FDNLGIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPFH---HDFY-KYALGLTA-S------N---GVET 193 (306)
T ss_dssp HHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBTSCCC---HHHH-HHHHTTTS-T------T---HHHH
T ss_pred HHhcCCCceeEEEECHHHHHHHHHHHhCccceeeEEEEcCccccCccc---HHHH-HHHhHHHH-H------H---HHHH
Confidence 999999999999999999999999999999999999999876542222 1111 11111000 0 0 0000
Q ss_pred HhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeC
Q 012188 327 ISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGE 406 (468)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~ 406 (468)
+................. .......+...+. .+.. .............+.++++|+|+++|+
T Consensus 194 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~---------~~~~---~~~~~~~~~~~~~l~~i~~P~lii~G~ 255 (306)
T 2r11_A 194 FLNWMMNDQNVLHPIFVK------QFKAGVMWQDGSR---------NPNP---NADGFPYVFTDEELRSARVPILLLLGE 255 (306)
T ss_dssp HHHHHTTTCCCSCHHHHH------HHHHHHHCCSSSC---------CCCC---CTTSSSCBCCHHHHHTCCSCEEEEEET
T ss_pred HHHHhhCCcccccccccc------ccHHHHHHHHhhh---------hhhh---hccCCCCCCCHHHHhcCCCCEEEEEeC
Confidence 000000000000000000 0000000000000 0000 000000112234457889999999999
Q ss_pred CCCccChhhHHHHH-HhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 407 DDELIPVECSYNVQ-RKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 407 ~D~~vp~~~~~~l~-~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
+|.++|++.+.++. +.+|++++++++++||+++. ++|+++++.|.+||++
T Consensus 256 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~~ 306 (306)
T 2r11_A 256 HEVIYDPHSALHRASSFVPDIEAEVIKNAGHVLSM-EQPTYVNERVMRFFNA 306 (306)
T ss_dssp TCCSSCHHHHHHHHHHHSTTCEEEEETTCCTTHHH-HSHHHHHHHHHHHHC-
T ss_pred CCcccCHHHHHHHHHHHCCCCEEEEeCCCCCCCcc-cCHHHHHHHHHHHHhC
Confidence 99999998887554 46899999999999999997 8999999999999963
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.5e-29 Score=257.38 Aligned_cols=281 Identities=16% Similarity=0.201 Sum_probs=176.4
Q ss_pred CCCCceeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCC-CCCCHHHHHHHHHHH
Q 012188 167 SDCDCKFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD-SLYTVREHLDMIEKS 245 (468)
Q Consensus 167 ~d~~~~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~-~~~t~~~~~~di~~~ 245 (468)
.||..++|..++ ++|+|||+||++++...+..+.+.|. ++||+|+++|+||||.|+.+.. ..++++++++++ ..
T Consensus 245 ~dg~~l~~~~~g-~~p~vv~~HG~~~~~~~~~~~~~~l~---~~G~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~d~-~~ 319 (555)
T 3i28_A 245 KPRVRLHFVELG-SGPAVCLCHGFPESWYSWRYQIPALA---QAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEM-VT 319 (555)
T ss_dssp ETTEEEEEEEEC-SSSEEEEECCTTCCGGGGTTHHHHHH---HTTCEEEEECCTTSTTSCCCSCGGGGSHHHHHHHH-HH
T ss_pred CCCcEEEEEEcC-CCCEEEEEeCCCCchhHHHHHHHHHH---hCCCEEEEecCCCCCCCCCCCCcccccHHHHHHHH-HH
Confidence 367778888776 67999999999988776666777776 4689999999999999987764 468899999999 69
Q ss_pred HhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhh----hhhH
Q 012188 246 VIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFG----ASMA 321 (468)
Q Consensus 246 l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 321 (468)
+++.++.++++++||||||.+++.+|.++|++|+++|+++++................ .+ .+...... ....
T Consensus 320 ~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~ 395 (555)
T 3i28_A 320 FLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKA--NP--VFDYQLYFQEPGVAEA 395 (555)
T ss_dssp HHHHHTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCTTSCHHHHHHT--CG--GGHHHHHHHSTTHHHH
T ss_pred HHHHcCCCcEEEEEecHHHHHHHHHHHhChHheeEEEEEccCCCCCCcccchHHHHhc--CC--ccchhHHhhCCCchHH
Confidence 9999999999999999999999999999999999999999876654333211111110 00 00000000 0000
Q ss_pred HHHHHHhhHHHHHhhccchhH------HH-------------HHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhccc
Q 012188 322 CWYEHISRTICLLICKNHRVW------EF-------------LAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTA 382 (468)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~------~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (468)
.....+.+.....+....... .. ............+. ..+.... +......+....
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~ 470 (555)
T 3i28_A 396 ELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYV-QQFKKSG----FRGPLNWYRNME 470 (555)
T ss_dssp HHHHCHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHH-HHHTTTT----THHHHHTTSCHH
T ss_pred HHhhhHHHHHHHHhccccccccccccccccccccccCccccccccccCHHHHHHHH-HHHhccc----chhHHHHHHhcc
Confidence 000000000000000000000 00 00000000000000 0000000 000000000000
Q ss_pred ccccchHHHhhccCCCcEEEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhcCCCC
Q 012188 383 NKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSSSGHE 462 (468)
Q Consensus 383 ~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~~~~ 462 (468)
..........+.++++|+|+++|++|.++|++.++.+.+.+|++++++++++||+++. ++|+++++.|.+||++.....
T Consensus 471 ~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~~~~~~~ 549 (555)
T 3i28_A 471 RNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPHLKRGHIEDCGHWTQM-DKPTEVNQILIKWLDSDARNP 549 (555)
T ss_dssp HHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTCTTCEEEEETTCCSCHHH-HSHHHHHHHHHHHHHHHTCC-
T ss_pred ccchhhccccccccccCEEEEEeCCCCCcCHHHHHHHHhhCCCceEEEeCCCCCCcch-hCHHHHHHHHHHHHHhccCCC
Confidence 0000112233468899999999999999999999999999999999999999999997 999999999999998865443
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.1e-27 Score=217.10 Aligned_cols=234 Identities=18% Similarity=0.170 Sum_probs=159.5
Q ss_pred CceeEEEecC--CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHh
Q 012188 170 DCKFCTCWSS--SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVI 247 (468)
Q Consensus 170 ~~~~~~~~~~--~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~ 247 (468)
..++|..+++ ++|+|||+||++++...+. +++.|. +||+|+++|+||||.|+.+ ..++++++++++ ..++
T Consensus 3 ~~l~y~~~g~~~~~~~vv~~hG~~~~~~~~~-~~~~l~----~g~~v~~~d~~g~g~s~~~--~~~~~~~~~~~~-~~~~ 74 (245)
T 3e0x_A 3 AMLHYVHVGNKKSPNTLLFVHGSGCNLKIFG-ELEKYL----EDYNCILLDLKGHGESKGQ--CPSTVYGYIDNV-ANFI 74 (245)
T ss_dssp CCCCEEEEECTTCSCEEEEECCTTCCGGGGT-TGGGGC----TTSEEEEECCTTSTTCCSC--CCSSHHHHHHHH-HHHH
T ss_pred ceeEEEecCCCCCCCEEEEEeCCcccHHHHH-HHHHHH----hCCEEEEecCCCCCCCCCC--CCcCHHHHHHHH-HHHH
Confidence 4567777765 5789999999998777665 667766 8999999999999999843 357999999999 6888
Q ss_pred ------cccCCceEEEEEEcccHHHHHHHHHh-CCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhh
Q 012188 248 ------EPNKVKSFHIVAHSLGCILALALAVK-HPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASM 320 (468)
Q Consensus 248 ------~~l~~~~i~lvGhS~Gg~ial~~a~~-~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (468)
+.++ +++++||||||.+++.++.+ +|+ ++++|+++|+........ .....+..... .
T Consensus 75 ~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~~~~~~----~~~~~~~~~~~-~-------- 138 (245)
T 3e0x_A 75 TNSEVTKHQK--NITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARFDKLDK----DFMEKIYHNQL-D-------- 138 (245)
T ss_dssp HHCTTTTTCS--CEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBCTTSCH----HHHHHHHTTCC-C--------
T ss_pred HhhhhHhhcC--ceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCccccccH----HHHHHHHHHHH-H--------
Confidence 8888 99999999999999999999 999 999999998765422221 11111111000 0
Q ss_pred HHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcE
Q 012188 321 ACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDV 400 (468)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pv 400 (468)
.++.... ....... ........+.. ........+.... .......+.++++|+
T Consensus 139 -~~~~~~~--------~~~~~~~----------~~~~~~~~~~~-~~~~~~~~~~~~~-------~~~~~~~~~~~~~P~ 191 (245)
T 3e0x_A 139 -NNYLLEC--------IGGIDNP----------LSEKYFETLEK-DPDIMINDLIACK-------LIDLVDNLKNIDIPV 191 (245)
T ss_dssp -HHHHHHH--------HTCSCSH----------HHHHHHTTSCS-SHHHHHHHHHHHH-------HCBCGGGGGGCCSCE
T ss_pred -hhcCccc--------ccccchH----------HHHHHHHHHhc-CcHHHHHHHHHhc-------cccHHHHHHhCCCCE
Confidence 0000000 0000000 00000000000 0000000000000 011122346789999
Q ss_pred EEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHH
Q 012188 401 NVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIW 455 (468)
Q Consensus 401 Lii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl 455 (468)
++++|++|.++|.+.++.+.+.+|++++++++++||+++. ++|+++.+.|.+||
T Consensus 192 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl 245 (245)
T 3e0x_A 192 KAIVAKDELLTLVEYSEIIKKEVENSELKIFETGKHFLLV-VNAKGVAEEIKNFI 245 (245)
T ss_dssp EEEEETTCSSSCHHHHHHHHHHSSSEEEEEESSCGGGHHH-HTHHHHHHHHHTTC
T ss_pred EEEEeCCCCCCCHHHHHHHHHHcCCceEEEeCCCCcceEE-ecHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999999997 89999999999885
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.2e-27 Score=224.09 Aligned_cols=266 Identities=15% Similarity=0.131 Sum_probs=157.7
Q ss_pred CCCceeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCC----CCCHHHHHHHHH
Q 012188 168 DCDCKFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDS----LYTVREHLDMIE 243 (468)
Q Consensus 168 d~~~~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~----~~t~~~~~~di~ 243 (468)
++..++|...+ ++|+|||+||++++...|..+.+.|+ ++|+|+++|+||||.|+.+... .|+.+++++++
T Consensus 13 ~~~~~~~~~~g-~g~~~vllHG~~~~~~~w~~~~~~l~----~~~~vi~~Dl~G~G~s~~~~~~~~~~~~~~~~~~~~~- 86 (291)
T 3qyj_A 13 TEARINLVKAG-HGAPLLLLHGYPQTHVMWHKIAPLLA----NNFTVVATDLRGYGDSSRPASVPHHINYSKRVMAQDQ- 86 (291)
T ss_dssp SSCEEEEEEEC-CSSEEEEECCTTCCGGGGTTTHHHHT----TTSEEEEECCTTSTTSCCCCCCGGGGGGSHHHHHHHH-
T ss_pred CCeEEEEEEcC-CCCeEEEECCCCCCHHHHHHHHHHHh----CCCEEEEEcCCCCCCCCCCCCCccccccCHHHHHHHH-
Confidence 45567777654 67899999999988776667888887 8999999999999999876542 37999999999
Q ss_pred HHHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhh------cCCCCCchhhhh
Q 012188 244 KSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKV------APRRVWPLIAFG 317 (468)
Q Consensus 244 ~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 317 (468)
..+++.++.++++++||||||.+|+.+|.++|++|+++|++++......... ......... ......+.....
T Consensus 87 ~~~~~~l~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (291)
T 3qyj_A 87 VEVMSKLGYEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDIAPTHKMYRT-TDQEFATAYYHWFFLIQPDNLPETLIG 165 (291)
T ss_dssp HHHHHHTTCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCHHHHHHT-CCHHHHHHTTHHHHTTCSTTHHHHHHH
T ss_pred HHHHHHcCCCCEEEEEEChHHHHHHHHHHhCchhccEEEEECCCCcchhhhc-chhhhhHHHHHHHHhccCCCchHHHHc
Confidence 6899999999999999999999999999999999999999986421000000 000000000 000000000000
Q ss_pred hhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcc-cccccchHHHhhccC
Q 012188 318 ASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGT-ANKLDGYLDAVRNHV 396 (468)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i 396 (468)
.....+... ........... +.......+. ..+.. ..........+... ...........+.++
T Consensus 166 ~~~~~~~~~---~~~~~~~~~~~--------~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 230 (291)
T 3qyj_A 166 ANPEYYLRK---CLEKWGKDFSA--------FHPQALAEYI-RCFSQ---PAVIHATCEDYRAAATIDLEHDELDMKQKI 230 (291)
T ss_dssp TCHHHHHHH---HHHHHCSCGGG--------SCHHHHHHHH-HHHTS---HHHHHHHHHHHHHHTTHHHHHHHTTTTCCB
T ss_pred CCHHHHHHH---HHHhcCCCccc--------CCHHHHHHHH-HHhcC---CCcchhHHHHHHcccccchhhcchhcCCcc
Confidence 000000000 00000000000 0000000000 00000 00000000000000 000001111234678
Q ss_pred CCcEEEEeeCCCCccCh-hhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 397 KCDVNVFHGEDDELIPV-ECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 397 ~~PvLii~G~~D~~vp~-~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
++|+|+|+|++|.+.+. .....+.+..++.+..+++ +||+++. |+|+++++.|.+||+.
T Consensus 231 ~~P~Lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~-~GH~~~~-E~P~~v~~~i~~fL~~ 290 (291)
T 3qyj_A 231 SCPVLVLWGEKGIIGRKYDVLATWRERAIDVSGQSLP-CGHFLPE-EAPEETYQAIYNFLTH 290 (291)
T ss_dssp CSCEEEEEETTSSHHHHSCHHHHHHTTBSSEEEEEES-SSSCHHH-HSHHHHHHHHHHHHHC
T ss_pred ccceEEEecccccccchhhHHHHHHhhcCCcceeecc-CCCCchh-hCHHHHHHHHHHHHhc
Confidence 99999999999976542 3345556667888888887 8999997 9999999999999974
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-27 Score=233.60 Aligned_cols=117 Identities=21% Similarity=0.301 Sum_probs=101.8
Q ss_pred CCCceeEEEecC---CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCC-CCCCHHHHHHHHH
Q 012188 168 DCDCKFCTCWSS---SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD-SLYTVREHLDMIE 243 (468)
Q Consensus 168 d~~~~~~~~~~~---~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~-~~~t~~~~~~di~ 243 (468)
+|..++|..+++ ++|+|||+||++++...+..+.+.|. ++||+|+++|+||||.|+.+.. ..+++.++++++
T Consensus 11 ~g~~l~y~~~G~~~~~~~~vv~~hG~~~~~~~~~~~~~~l~---~~g~~vi~~d~~g~g~s~~~~~~~~~~~~~~~~~~- 86 (356)
T 2e3j_A 11 RGTRIHAVADSPPDQQGPLVVLLHGFPESWYSWRHQIPALA---GAGYRVVAIDQRGYGRSSKYRVQKAYRIKELVGDV- 86 (356)
T ss_dssp TTEEEEEEEECCTTCCSCEEEEECCTTCCGGGGTTTHHHHH---HTTCEEEEECCTTSTTSCCCCSGGGGSHHHHHHHH-
T ss_pred CCeEEEEEEecCCCCCCCEEEEECCCCCcHHHHHHHHHHHH---HcCCEEEEEcCCCCCCCCCCCcccccCHHHHHHHH-
Confidence 566688888775 68999999999987766666777776 3689999999999999987654 357999999999
Q ss_pred HHHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCC
Q 012188 244 KSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPY 288 (468)
Q Consensus 244 ~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~ 288 (468)
..+++.++.++++++||||||.+++.+|.++|++|+++|+++++.
T Consensus 87 ~~~~~~l~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 131 (356)
T 2e3j_A 87 VGVLDSYGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPF 131 (356)
T ss_dssp HHHHHHTTCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCC
T ss_pred HHHHHHcCCCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcc
Confidence 699999999999999999999999999999999999999999765
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-26 Score=227.89 Aligned_cols=279 Identities=10% Similarity=0.117 Sum_probs=169.2
Q ss_pred CCCceeEEEecCC----CCeEEEEecCCCCccc---------hhhhhhh---ccccCCCcceEEEECCCC-CCCCCCCCC
Q 012188 168 DCDCKFCTCWSSS----SRDTLFVKTQGPSAFW---------TETLFPN---FSSASKSTYRLFAIDLLG-FGRSPKPTD 230 (468)
Q Consensus 168 d~~~~~~~~~~~~----~p~vl~lHG~g~s~~~---------~~~~~~~---L~~~~~~gy~Via~D~~G-~G~S~~~~~ 230 (468)
++..++|..+++. +|+|||+||++++... |..+++. |. ++||+|+++|+|| +|.|+.+..
T Consensus 42 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~L~---~~g~~vi~~D~~G~~g~s~~~~~ 118 (377)
T 2b61_A 42 SYINVAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALD---TDRYFFISSNVLGGCKGTTGPSS 118 (377)
T ss_dssp CSEEEEEEEESCCCTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEE---TTTCEEEEECCTTCSSSSSCTTS
T ss_pred cceeEEEEecccccccCCCeEEEeCCCCCccccccccccchhhhhccCcccccc---cCCceEEEecCCCCCCCCCCCcc
Confidence 5566788887652 6899999999886653 5556653 52 4899999999999 798876531
Q ss_pred -------------CCCCHHHHHHHHHHHHhcccCCceEE-EEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCch
Q 012188 231 -------------SLYTVREHLDMIEKSVIEPNKVKSFH-IVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQ 296 (468)
Q Consensus 231 -------------~~~t~~~~~~di~~~l~~~l~~~~i~-lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~ 296 (468)
..++++++++++ ..+++.++.++++ |+||||||.+|+.+|.++|++|+++|++++..........
T Consensus 119 ~~~~~g~~~~~~~~~~~~~~~~~~l-~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 197 (377)
T 2b61_A 119 INPQTGKPYGSQFPNIVVQDIVKVQ-KALLEHLGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEAIG 197 (377)
T ss_dssp BCTTTSSBCGGGCCCCCHHHHHHHH-HHHHHHTTCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHHHH
T ss_pred cCccccccccccCCcccHHHHHHHH-HHHHHHcCCcceeEEEEEChhHHHHHHHHHHCchhhheeEEeccCccccccchh
Confidence 147999999999 6999999999998 9999999999999999999999999999987543211100
Q ss_pred hhHHHHHhhcCCCCCchhhh--------hhhhHHHHHHHh----hHHHHHhhccchh-------HHHHHHHHhhhHHHHH
Q 012188 297 ASQYVMRKVAPRRVWPLIAF--------GASMACWYEHIS----RTICLLICKNHRV-------WEFLAKLVTRNRIRTF 357 (468)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~----~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 357 (468)
........+.....|....+ +........... ..+...+...... ......... .
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 271 (377)
T 2b61_A 198 FNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLS------Y 271 (377)
T ss_dssp HHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHH------H
T ss_pred HHHHHHHHHhcCccccccchhccCCCchhhhHHHHhhhhcccCHHHHHHHhccccccccccccchHHHHHHHH------h
Confidence 01111111111111111000 000000000000 0000000000000 000000000 0
Q ss_pred hhhccccccchhHHhhHhHHH-hcccccccchHHHhhccCCCcEEEEeeCCCCccCh----hhHHHHHHhCCCCeEEEec
Q 012188 358 LLEGFFCHTHNAAWHTLHNII-CGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPV----ECSYNVQRKIPRARVKVIE 432 (468)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~----~~~~~l~~~~p~~~l~~i~ 432 (468)
....+........+......+ ..............+.++++|+|+|+|++|.++|+ +.++.+.+.+|++++++++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~i~ 351 (377)
T 2b61_A 272 QGKKFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGVDLHFYEFP 351 (377)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred hhhhhccccChhHHHHHHHHHhccccccccchHHhhhhhcCCCEEEEecCCcccCCccchHHHHHHHHhcCCCceEEEeC
Confidence 000000000011111111111 00000001223445678999999999999999999 8899999999999999999
Q ss_pred -CCCccccccCcHHHHHHHHHHHHhh
Q 012188 433 -KKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 433 -~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
++||+++. ++|+++++.|.+||++
T Consensus 352 ~~~gH~~~~-e~p~~~~~~i~~fl~~ 376 (377)
T 2b61_A 352 SDYGHDAFL-VDYDQFEKRIRDGLAG 376 (377)
T ss_dssp CTTGGGHHH-HCHHHHHHHHHHHHHT
T ss_pred CCCCchhhh-cCHHHHHHHHHHHHhc
Confidence 99999997 8999999999999975
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P | Back alignment and structure |
|---|
Probab=99.95 E-value=3.9e-27 Score=226.95 Aligned_cols=263 Identities=13% Similarity=0.050 Sum_probs=154.2
Q ss_pred ceeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCC--cceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhc
Q 012188 171 CKFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKS--TYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIE 248 (468)
Q Consensus 171 ~~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~--gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~ 248 (468)
.++|+.+++++|+|||+||++.+...|..+.+.|+ + +|+|+++|+||||.|+.+....++++++++|+ ..+++
T Consensus 28 ~~~~~~~g~~~p~lvllHG~~~~~~~w~~~~~~L~----~~~~~~via~Dl~GhG~S~~~~~~~~~~~~~a~dl-~~~l~ 102 (316)
T 3c5v_A 28 TFRVYKSGSEGPVLLLLHGGGHSALSWAVFTAAII----SRVQCRIVALDLRSHGETKVKNPEDLSAETMAKDV-GNVVE 102 (316)
T ss_dssp EEEEEEECSSSCEEEEECCTTCCGGGGHHHHHHHH----TTBCCEEEEECCTTSTTCBCSCTTCCCHHHHHHHH-HHHHH
T ss_pred EEEEEecCCCCcEEEEECCCCcccccHHHHHHHHh----hcCCeEEEEecCCCCCCCCCCCccccCHHHHHHHH-HHHHH
Confidence 46677777678999999999887765566888887 6 89999999999999987655568999999999 68999
Q ss_pred cc--CC-ceEEEEEEcccHHHHHHHHHh--CCCccceEEEecCCCCCCCCCchhhHHHHHhhc-CCCCCchhhhhhhhHH
Q 012188 249 PN--KV-KSFHIVAHSLGCILALALAVK--HPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVA-PRRVWPLIAFGASMAC 322 (468)
Q Consensus 249 ~l--~~-~~i~lvGhS~Gg~ial~~a~~--~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 322 (468)
++ +. ++++|+||||||.+|+.+|.+ +|+ |+++|++++.... ............. ....+... ..
T Consensus 103 ~l~~~~~~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~------~~ 172 (316)
T 3c5v_A 103 AMYGDLPPPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDVVEGT---AMDALNSMQNFLRGRPKTFKSL------EN 172 (316)
T ss_dssp HHHTTCCCCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESCCHHH---HHHHHHHHHHHHHHSCSCBSSH------HH
T ss_pred HHhccCCCCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEcccccc---hhhhHHHHHHHHhhCccccccH------HH
Confidence 88 65 789999999999999999996 576 9999999864210 0000000000000 00000000 00
Q ss_pred HHHHHhhHHHHHhhccchhHH-HHHHHHhhhH-HH---HH-hhhccccccchhHHhhHhHHHhcccccccchHHHhhccC
Q 012188 323 WYEHISRTICLLICKNHRVWE-FLAKLVTRNR-IR---TF-LLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHV 396 (468)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 396 (468)
........ .......... .......... .. .. ....+........ ....... ....+...+.++
T Consensus 173 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~----~~~~~~~~~~~i 242 (316)
T 3c5v_A 173 AIEWSVKS---GQIRNLESARVSMVGQVKQCEGITSPEGSKKDHPYTWRIELAK---TEKYWDG----WFRGLSNLFLSC 242 (316)
T ss_dssp HHHHHHHT---TSCCCHHHHHHHHHHHEEECC------------CEEESCCGGG---GHHHHHH----HHTTHHHHHHHS
T ss_pred HHHHhhhc---ccccchhhhhhhhhHHhhhccccccccccccccceeeeecccc---hhhhhhh----hhhhhHHHhhcC
Confidence 00000000 0000000000 0000000000 00 00 0000000000000 0000000 000112233578
Q ss_pred CCcEEEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhcCCCC
Q 012188 397 KCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSSSGHE 462 (468)
Q Consensus 397 ~~PvLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~~~~ 462 (468)
++|+|+|+|++|.+.+... ..+..+++++++++++||+++. |+|++|++.|.+||++.....
T Consensus 243 ~~P~Lli~g~~D~~~~~~~---~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~~~~~ 304 (316)
T 3c5v_A 243 PIPKLLLLAGVDRLDKDLT---IGQMQGKFQMQVLPQCGHAVHE-DAPDKVAEAVATFLIRHRFAE 304 (316)
T ss_dssp SSCEEEEESSCCCCCHHHH---HHHHTTCSEEEECCCCSSCHHH-HSHHHHHHHHHHHHHHTTSSC
T ss_pred CCCEEEEEecccccccHHH---HHhhCCceeEEEcCCCCCcccc-cCHHHHHHHHHHHHHhccccc
Confidence 9999999999998754322 2334578899999999999998 999999999999998765443
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.7e-27 Score=223.25 Aligned_cols=236 Identities=12% Similarity=0.156 Sum_probs=140.1
Q ss_pred CCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCce--EEEE
Q 012188 181 SRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKS--FHIV 258 (468)
Q Consensus 181 ~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~--i~lv 258 (468)
+|+|||+||++++...|..+++.|+ +++|+|+++|+||||.|+.+. .++++++++++ ..+++.++.++ ++|+
T Consensus 16 ~~~vvllHG~~~~~~~w~~~~~~L~---~~~~~vi~~Dl~GhG~S~~~~--~~~~~~~a~~l-~~~l~~l~~~~~p~~lv 89 (264)
T 1r3d_A 16 TPLVVLVHGLLGSGADWQPVLSHLA---RTQCAALTLDLPGHGTNPERH--CDNFAEAVEMI-EQTVQAHVTSEVPVILV 89 (264)
T ss_dssp BCEEEEECCTTCCGGGGHHHHHHHT---TSSCEEEEECCTTCSSCC---------CHHHHHH-HHHHHTTCCTTSEEEEE
T ss_pred CCcEEEEcCCCCCHHHHHHHHHHhc---ccCceEEEecCCCCCCCCCCC--ccCHHHHHHHH-HHHHHHhCcCCCceEEE
Confidence 3889999999987776666888775 468999999999999998653 36889999999 69999998876 9999
Q ss_pred EEcccHHHHHH---HHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHH-----hhH
Q 012188 259 AHSLGCILALA---LAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHI-----SRT 330 (468)
Q Consensus 259 GhS~Gg~ial~---~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 330 (468)
||||||.+++. +|.++|++|+++|++++....... ........ ....|...+ ...
T Consensus 90 GhSmGG~va~~~~~~a~~~p~~v~~lvl~~~~~~~~~~----~~~~~~~~-------------~~~~~~~~~~~~~~~~~ 152 (264)
T 1r3d_A 90 GYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQEN----EEKAARWQ-------------HDQQWAQRFSQQPIEHV 152 (264)
T ss_dssp EETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSH----HHHHHHHH-------------HHHHHHHHHHHSCHHHH
T ss_pred EECHhHHHHHHHHHHHhhCccccceEEEecCCCCCCCh----hhhhhhhc-------------ccHHHHHHhccccHHHH
Confidence 99999999999 888999999999999875422110 00000000 000000000 000
Q ss_pred HHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCc
Q 012188 331 ICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDEL 410 (468)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~ 410 (468)
..... ....+.. ......... ....... ..... ..................+.++++|+++|+|++|..
T Consensus 153 ~~~~~-~~~~~~~-----~~~~~~~~~-~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~ 221 (264)
T 1r3d_A 153 LSDWY-QQAVFSS-----LNHEQRQTL-IAQRSAN-LGSSV---AHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSK 221 (264)
T ss_dssp HHHHT-TSGGGTT-----CCHHHHHHH-HHHHTTS-CHHHH---HHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHH
T ss_pred HHHHh-hhhhhhc-----cCHHHHHHH-HHHHhhc-chHHH---HHHHHhhhhccCccHHHHHHhcCCCEEEEEECCCch
Confidence 00000 0000000 000000000 0000000 00000 001100000001123344578899999999999986
Q ss_pred cChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 411 IPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 411 vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
++ .+.+.++ .++++++++||++++ |+|+++++.|.+|+++
T Consensus 222 ~~-----~~~~~~~-~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 261 (264)
T 1r3d_A 222 FQ-----QLAESSG-LSYSQVAQAGHNVHH-EQPQAFAKIVQAMIHS 261 (264)
T ss_dssp HH-----HHHHHHC-SEEEEETTCCSCHHH-HCHHHHHHHHHHHHHH
T ss_pred HH-----HHHHHhC-CcEEEcCCCCCchhh-cCHHHHHHHHHHHHHH
Confidence 52 2333333 789999999999997 9999999999999975
|
| >2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-26 Score=234.65 Aligned_cols=289 Identities=14% Similarity=0.120 Sum_probs=168.6
Q ss_pred CCCceeEEEecC----CCCeEEEEecCCCCccc---hhhhhhhccccCCCcceEEEECCCC--CCCCCCC----C-C---
Q 012188 168 DCDCKFCTCWSS----SSRDTLFVKTQGPSAFW---TETLFPNFSSASKSTYRLFAIDLLG--FGRSPKP----T-D--- 230 (468)
Q Consensus 168 d~~~~~~~~~~~----~~p~vl~lHG~g~s~~~---~~~~~~~L~~~~~~gy~Via~D~~G--~G~S~~~----~-~--- 230 (468)
++..++|..|++ ++|+|||+||++++... |..+++....+.++||+|+++|+|| ||.|+.. . +
T Consensus 92 ~g~~l~y~~~G~~~~~~~p~vvllHG~~~~~~~~~~w~~~~~~~~~L~~~~~~Vi~~D~~G~~~G~S~~~~~~~~~~~~~ 171 (444)
T 2vat_A 92 RDVPVAYKSWGRMNVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAEGQR 171 (444)
T ss_dssp EEEEEEEEEESCCCTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC--C
T ss_pred cceeEEEEEecCCCCCCCCeEEEECCCCcccchhhHHHHhcCccchhhccCCEEEEecCCCCCCCCCCCCCCCccccccc
Confidence 455678888875 36899999999886653 5556652111124899999999999 6988532 1 1
Q ss_pred ------CCCCHHHHHHHHHHHHhcccCCce-EEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHH
Q 012188 231 ------SLYTVREHLDMIEKSVIEPNKVKS-FHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMR 303 (468)
Q Consensus 231 ------~~~t~~~~~~di~~~l~~~l~~~~-i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~ 303 (468)
..++++++++++ ..++++++.++ ++++||||||.+|+.+|.++|++|+++|++++.................
T Consensus 172 ~~~~~f~~~t~~~~a~dl-~~ll~~l~~~~~~~lvGhSmGG~ial~~A~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~ 250 (444)
T 2vat_A 172 PYGAKFPRTTIRDDVRIH-RQVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSGWCAAWFETQRQ 250 (444)
T ss_dssp BCGGGCCCCCHHHHHHHH-HHHHHHHTCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCHHHHHHHHHHHH
T ss_pred ccccccccccHHHHHHHH-HHHHHhcCCccceEEEEECHHHHHHHHHHHhChHhhheEEEEeccccCCccchhHHHHHHH
Confidence 137999999999 69999999998 9999999999999999999999999999999876432111000000000
Q ss_pred hhcCCCCCchhh--------hhhhhHHHHHHHh----hHHHHHhhccchh-H-H-------HH--------------HHH
Q 012188 304 KVAPRRVWPLIA--------FGASMACWYEHIS----RTICLLICKNHRV-W-E-------FL--------------AKL 348 (468)
Q Consensus 304 ~~~~~~~~~~~~--------~~~~~~~~~~~~~----~~~~~~~~~~~~~-~-~-------~~--------------~~~ 348 (468)
.+.....|.... .+.........+. ......+...... . . .+ ...
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (444)
T 2vat_A 251 CIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTDSGNSHRAGQPI 330 (444)
T ss_dssp HHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC---------------------------CG
T ss_pred HHhcCCccccccccccCCcccchhHHHhhhhccccChHHHHHHhccCccccccccccccccccccccccccccccccCch
Confidence 111111111000 0000000000000 0000000000000 0 0 00 000
Q ss_pred HhhhHHHHHhhhccccccchhHHhhHhHHHhcccc--cccchHHHhhccCCCcEEEEeeCCCCccChhhHHHHHHhCCCC
Q 012188 349 VTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTAN--KLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRA 426 (468)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~~ 426 (468)
.....+.......+........+......+..... .........+.++++|+|+|+|++|.++|++.++.+.+.+|++
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~~p~~~~~~l~~~~p~~ 410 (444)
T 2vat_A 331 EAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFDEHVEMGRSIPNS 410 (444)
T ss_dssp GGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHHHHHHHHHHSTTE
T ss_pred hhHHHHHHHHHHHHhhccCccHHHHHHHHhhhhhccccccccHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCc
Confidence 00000000000001101111111111111111000 0011144556889999999999999999999999999999999
Q ss_pred eEEEec-CCCccccccCcHHHHHHHHHHHHhhc
Q 012188 427 RVKVIE-KKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 427 ~l~~i~-~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
++++++ ++||+++. ++|+++++.|.+||++.
T Consensus 411 ~~~~i~~~~GH~~~~-e~p~~~~~~i~~fL~~~ 442 (444)
T 2vat_A 411 RLCVVDTNEGHDFFV-MEADKVNDAVRGFLDQS 442 (444)
T ss_dssp EEEECCCSCGGGHHH-HTHHHHHHHHHHHHTC-
T ss_pred EEEEeCCCCCcchHH-hCHHHHHHHHHHHHHHh
Confidence 999999 89999998 89999999999999753
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A | Back alignment and structure |
|---|
Probab=99.95 E-value=5.5e-27 Score=237.35 Aligned_cols=262 Identities=15% Similarity=0.137 Sum_probs=166.8
Q ss_pred CCCceeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHh
Q 012188 168 DCDCKFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVI 247 (468)
Q Consensus 168 d~~~~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~ 247 (468)
||..++|..++ ++|+|||+||++++...+..+++.|. ++||+|+++|+||||.|+.+.. .++++++++|+ ..++
T Consensus 12 dG~~l~y~~~G-~gp~VV~lHG~~~~~~~~~~l~~~La---~~Gy~Vi~~D~rG~G~S~~~~~-~~s~~~~a~dl-~~~l 85 (456)
T 3vdx_A 12 TSIDLYYEDHG-TGVPVVLIHGFPLSGHSWERQSAALL---DAGYRVITYDRRGFGQSSQPTT-GYDYDTFAADL-NTVL 85 (456)
T ss_dssp EEEEEEEEEES-SSEEEEEECCTTCCGGGGTTHHHHHH---HHTEEEEEECCTTSTTSCCCSS-CCSHHHHHHHH-HHHH
T ss_pred CCeEEEEEEeC-CCCEEEEECCCCCcHHHHHHHHHHHH---HCCcEEEEECCCCCCCCCCCCC-CCCHHHHHHHH-HHHH
Confidence 55667777765 67999999999987776666778774 3799999999999999987663 68999999999 6999
Q ss_pred cccCCceEEEEEEcccHHHHHHHHHhC-CCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHH---
Q 012188 248 EPNKVKSFHIVAHSLGCILALALAVKH-PGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACW--- 323 (468)
Q Consensus 248 ~~l~~~~i~lvGhS~Gg~ial~~a~~~-p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 323 (468)
+.++.++++++||||||.+++.+|+++ |++++++|++++........... .................
T Consensus 86 ~~l~~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~ 156 (456)
T 3vdx_A 86 ETLDLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDN---------PDGAAPQEFFDGIVAAVKAD 156 (456)
T ss_dssp HHHTCCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCCSCCBCCSSC---------CSCSBCHHHHHHHHHHHHHC
T ss_pred HHhCCCCeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCccccccccccc---------ccccchHHHHHHHHHhhhcc
Confidence 999999999999999999999988887 99999999999865332111000 00000000000000000
Q ss_pred -HHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEE
Q 012188 324 -YEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNV 402 (468)
Q Consensus 324 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLi 402 (468)
...........+........ .............. .......... .... ........+.++++|+|+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~----~~~d~~~~l~~i~~PvLi 223 (456)
T 3vdx_A 157 RYAFYTGFFNDFYNLDENLGT----RISEEAVRNSWNTA-ASGGFFAAAA----APTT----WYTDFRADIPRIDVPALI 223 (456)
T ss_dssp HHHHHHHHHHHHTTTTTSBTT----TBCHHHHHHHHHHH-HTSCTTHHHH----GGGG----TTCCCTTTSTTCCSCCEE
T ss_pred chHHHHHHHHHHhcccccccc----cccHHHHHHHhhhc-cccchhhhhh----hhhh----hhhhHHHHhhhCCCCEEE
Confidence 00000000000000000000 00000000000000 0000000000 0000 011122334688999999
Q ss_pred EeeCCCCccChh-hHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 403 FHGEDDELIPVE-CSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 403 i~G~~D~~vp~~-~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
++|++|.++|++ ..+.+.+.+|++++++++++||+++. ++|+++.+.|.+||++.
T Consensus 224 I~G~~D~~vp~~~~~~~l~~~~~~~~~~~i~gagH~~~~-e~p~~v~~~I~~FL~~~ 279 (456)
T 3vdx_A 224 LHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLW-THAEEVNTALLAFLAKA 279 (456)
T ss_dssp EEETTCSSSCGGGTHHHHHHHCTTSEEEEETTCCSCTTT-TTHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCcCHHHHHHHHHHHCCCceEEEeCCCCCcchh-hCHHHHHHHHHHHHHHh
Confidence 999999999998 78888888999999999999999987 99999999999999863
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=9.1e-27 Score=220.62 Aligned_cols=254 Identities=15% Similarity=0.206 Sum_probs=163.0
Q ss_pred CCCCceeEEEecCC---CCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHH
Q 012188 167 SDCDCKFCTCWSSS---SRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIE 243 (468)
Q Consensus 167 ~d~~~~~~~~~~~~---~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~ 243 (468)
.||..+.++.|.+. +|+|||+||++++...+..+.+.|. ++||+|+++|+||||.|+.+....+++.++++++
T Consensus 25 ~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~l~---~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~- 100 (303)
T 3pe6_A 25 ADGQYLFCRYWAPTGTPKALIFVSHGAGEHSGRYEELARMLM---GLDLLVFAHDHVGHGQSEGERMVVSDFHVFVRDV- 100 (303)
T ss_dssp TTSCEEEEEEECCSSCCSEEEEEECCTTCCGGGGHHHHHHHH---HTTEEEEEECCTTSTTSCSSTTCCSSTHHHHHHH-
T ss_pred CCCeEEEEEEeccCCCCCeEEEEECCCCchhhHHHHHHHHHH---hCCCcEEEeCCCCCCCCCCCCCCCCCHHHHHHHH-
Confidence 36777888888533 5789999999988776667888877 4699999999999999987665567888888888
Q ss_pred HHHhccc----CCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHH----hhcCCCCCchhh
Q 012188 244 KSVIEPN----KVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMR----KVAPRRVWPLIA 315 (468)
Q Consensus 244 ~~l~~~l----~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 315 (468)
..+++.+ +.++++++||||||.+++.+|.++|++++++|+++|................. ...........
T Consensus 101 ~~~l~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 179 (303)
T 3pe6_A 101 LQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLAAKVLNSVLPNLSSGPI- 179 (303)
T ss_dssp HHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSSBCHHHHHHHHHHHHHHHHTTCCSCCCCCC-
T ss_pred HHHHHHHhhccCCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECccccCchhccHHHHHHHHHHHHHhcccccCCcc-
Confidence 4666554 44599999999999999999999999999999999876442111100000000 00000000000
Q ss_pred hhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhcc
Q 012188 316 FGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNH 395 (468)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (468)
...+. ... ......+......... ............ ........+.+
T Consensus 180 ----~~~~~-----------~~~------------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~ 226 (303)
T 3pe6_A 180 ----DSSVL-----------SRN------------KTEVDIYNSDPLICRA-GLKVCFGIQLLN-----AVSRVERALPK 226 (303)
T ss_dssp ----CGGGT-----------CSC------------HHHHHHHHTCTTSCCS-CCCHHHHHHHHH-----HHHHHHHHGGG
T ss_pred ----chhhh-----------hcc------------hhHHHHhccCcccccc-chhhhhHHHHHH-----HHHHHHHHhhc
Confidence 00000 000 0000000000000000 000000000000 00122334578
Q ss_pred CCCcEEEEeeCCCCccChhhHHHHHHhCC--CCeEEEecCCCccccccCcHHHHHH---HHHHHHhhcC
Q 012188 396 VKCDVNVFHGEDDELIPVECSYNVQRKIP--RARVKVIEKKDHITIVVGRQKTFAR---ELEEIWRSSS 459 (468)
Q Consensus 396 i~~PvLii~G~~D~~vp~~~~~~l~~~~p--~~~l~~i~~~gH~~~~~e~p~~~~~---~i~~fl~~~~ 459 (468)
+++|+++++|++|.++|.+.++.+.+.++ ++++++++++||+++. ++|+++.+ .+.+||++..
T Consensus 227 i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~p~~~~~~~~~~~~~l~~~~ 294 (303)
T 3pe6_A 227 LTVPFLLLQGSADRLCDSKGAYLLMELAKSQDKTLKIYEGAYHVLHK-ELPEVTNSVFHEINMWVSQRT 294 (303)
T ss_dssp CCSCEEEEEETTCSSBCHHHHHHHHHHCCCSSEEEEEETTCCSCGGG-SCHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEeeCCCCCCChHHHHHHHHhcccCCceEEEeCCCccceec-cchHHHHHHHHHHHHHHhccC
Confidence 89999999999999999999999999998 7899999999999997 88875554 5777777654
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.7e-26 Score=222.76 Aligned_cols=252 Identities=15% Similarity=0.204 Sum_probs=164.3
Q ss_pred CCCCceeEEEecC---CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHH
Q 012188 167 SDCDCKFCTCWSS---SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIE 243 (468)
Q Consensus 167 ~d~~~~~~~~~~~---~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~ 243 (468)
.||..+.+..|.+ ++|+|||+||++++...+..+.+.|. ++||+|+++|+||||.|+.+....+++.++++|+
T Consensus 43 ~dg~~l~~~~~~p~~~~~p~vv~~HG~~~~~~~~~~~~~~l~---~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~- 118 (342)
T 3hju_A 43 ADGQYLFCRYWKPTGTPKALIFVSHGAGEHSGRYEELARMLM---GLDLLVFAHDHVGHGQSEGERMVVSDFHVFVRDV- 118 (342)
T ss_dssp TTSCEEEEEEECCSSCCSEEEEEECCTTCCGGGGHHHHHHHH---TTTEEEEEECCTTSTTSCSSTTCCSCTHHHHHHH-
T ss_pred cCCeEEEEEEeCCCCCCCcEEEEECCCCcccchHHHHHHHHH---hCCCeEEEEcCCCCcCCCCcCCCcCcHHHHHHHH-
Confidence 4677788888843 35689999999988776667888887 4699999999999999987765667888888888
Q ss_pred HHHhccc----CCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHH----hhcCCCCCchhh
Q 012188 244 KSVIEPN----KVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMR----KVAPRRVWPLIA 315 (468)
Q Consensus 244 ~~l~~~l----~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 315 (468)
..+++.+ +.++++|+||||||.+++.+|.++|++|+++|+++|................. ...+........
T Consensus 119 ~~~l~~l~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (342)
T 3hju_A 119 LQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLAAKVLNLVLPNLSLGPID 198 (342)
T ss_dssp HHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCSCCTTTTSHHHHHHHHHHHHHCTTCBCCCCC
T ss_pred HHHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhCccccceEEEECcccccchhhhhHHHHHHHHHHHHhccccccCccc
Confidence 4666554 44599999999999999999999999999999999877654332211111111 001000000000
Q ss_pred hhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhcc
Q 012188 316 FGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNH 395 (468)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (468)
. ...... .. ....+......... ............ ........+.+
T Consensus 199 -----~-----------~~~~~~---~~---------~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~ 244 (342)
T 3hju_A 199 -----S-----------SVLSRN---KT---------EVDIYNSDPLICRA-GLKVCFGIQLLN-----AVSRVERALPK 244 (342)
T ss_dssp -----G-----------GGSCSC---HH---------HHHHHHTCTTCCCS-CCBHHHHHHHHH-----HHHHHHHHGGG
T ss_pred -----c-----------cccccc---hH---------HHHHHhcCcccccc-cccHHHHHHHHH-----HHHHHHHHHHh
Confidence 0 000000 00 00000000000000 000000000000 01122344578
Q ss_pred CCCcEEEEeeCCCCccChhhHHHHHHhCC--CCeEEEecCCCccccccCcHHHHHH---HHHHHHhh
Q 012188 396 VKCDVNVFHGEDDELIPVECSYNVQRKIP--RARVKVIEKKDHITIVVGRQKTFAR---ELEEIWRS 457 (468)
Q Consensus 396 i~~PvLii~G~~D~~vp~~~~~~l~~~~p--~~~l~~i~~~gH~~~~~e~p~~~~~---~i~~fl~~ 457 (468)
+++|+|+++|++|.++|.+.++.+.+.++ ++++++++++||+.+. ++|+++.+ .+.+||++
T Consensus 245 i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~~~~~~~~l~~ 310 (342)
T 3hju_A 245 LTVPFLLLQGSADRLCDSKGAYLLMELAKSQDKTLKIYEGAYHVLHK-ELPEVTNSVFHEINMWVSQ 310 (342)
T ss_dssp CCSCEEEEEETTCSSSCHHHHHHHHHHCCCSSEEEEEETTCCSCGGG-SCHHHHHHHHHHHHHHHHH
T ss_pred CCcCEEEEEeCCCcccChHHHHHHHHHcCCCCceEEEECCCCchhhc-CChHHHHHHHHHHHHHHhc
Confidence 89999999999999999999999999998 7899999999999997 88875554 46677765
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.95 E-value=7.1e-27 Score=221.58 Aligned_cols=253 Identities=13% Similarity=0.105 Sum_probs=155.3
Q ss_pred CceeEEEecCCCCeEEEEecCC--CCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHh
Q 012188 170 DCKFCTCWSSSSRDTLFVKTQG--PSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVI 247 (468)
Q Consensus 170 ~~~~~~~~~~~~p~vl~lHG~g--~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~ 247 (468)
..+++.. .+++|+|||+||+| ++...|..+.+.|. ++|+|+++|+||||.|+.+....++++++++++ ..++
T Consensus 31 ~~~~~~~-~~~~p~vv~lHG~G~~~~~~~~~~~~~~L~----~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l-~~~l 104 (292)
T 3l80_A 31 GPIYTCH-REGNPCFVFLSGAGFFSTADNFANIIDKLP----DSIGILTIDAPNSGYSPVSNQANVGLRDWVNAI-LMIF 104 (292)
T ss_dssp SCEEEEE-ECCSSEEEEECCSSSCCHHHHTHHHHTTSC----TTSEEEEECCTTSTTSCCCCCTTCCHHHHHHHH-HHHH
T ss_pred ceEEEec-CCCCCEEEEEcCCCCCcHHHHHHHHHHHHh----hcCeEEEEcCCCCCCCCCCCcccccHHHHHHHH-HHHH
Confidence 3455543 45679999999654 34444555777776 899999999999999985555678999999999 6999
Q ss_pred cccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCC----CCchhhHHHHHhhcCCCCCchhhhhhhhHHH
Q 012188 248 EPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVP----KGAQASQYVMRKVAPRRVWPLIAFGASMACW 323 (468)
Q Consensus 248 ~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (468)
+.++.++++|+||||||.+|+.+|.++|++|+++|+++|...... ....... .......... . ....
T Consensus 105 ~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~----~~~~- 175 (292)
T 3l80_A 105 EHFKFQSYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPTTVMIYRAGFSSDLYPQ-LALRRQKLKT---A----ADRL- 175 (292)
T ss_dssp HHSCCSEEEEEEETTHHHHHHHHHHHCSSEEEEEEEESCCCHHHHHHCTTSSSSHH-HHHHHHTCCS---H----HHHH-
T ss_pred HHhCCCCeEEEEEchhHHHHHHHHHhCchheeeEEEECCCCcchhhhccccccchh-HHHHHHHHhc---c----Cchh-
Confidence 999999999999999999999999999999999999996542100 0000000 0000000000 0 0000
Q ss_pred HHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEE
Q 012188 324 YEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVF 403 (468)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii 403 (468)
..+.......+. ............ ......... .. +.. ...............+.. ++|++++
T Consensus 176 -~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~----~~------l~~-~~~~~~~~~~~~~~~l~~-~~P~lii 238 (292)
T 3l80_A 176 -NYLKDLSRSHFS--SQQFKQLWRGYD--YCQRQLNDV----QS------LPD-FKIRLALGEEDFKTGISE-KIPSIVF 238 (292)
T ss_dssp -HHHHHHHHHHSC--HHHHHHHHHHHH--HHHHHHHTT----TT------STT-CCSSCCCCGGGGCCCCCT-TSCEEEE
T ss_pred -hhHhhccccccC--HHHHHHhHHHHH--HHHHHHHhh----hh------ccc-cchhhhhcchhhhhccCC-CCCEEEE
Confidence 000000000000 000000000000 000000000 00 000 000000000111123455 8999999
Q ss_pred eeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 404 HGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 404 ~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
+|++|..++++ + .+.+.+|+++ ++++++||+++. ++|+++++.|.+||++.
T Consensus 239 ~g~~D~~~~~~-~-~~~~~~~~~~-~~~~~~gH~~~~-e~p~~~~~~i~~fl~~~ 289 (292)
T 3l80_A 239 SESFREKEYLE-S-EYLNKHTQTK-LILCGQHHYLHW-SETNSILEKVEQLLSNH 289 (292)
T ss_dssp ECGGGHHHHHT-S-TTCCCCTTCE-EEECCSSSCHHH-HCHHHHHHHHHHHHHTC
T ss_pred EccCccccchH-H-HHhccCCCce-eeeCCCCCcchh-hCHHHHHHHHHHHHHhc
Confidence 99999999998 6 8888889999 999999999997 99999999999999863
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.4e-27 Score=221.00 Aligned_cols=230 Identities=16% Similarity=0.132 Sum_probs=159.8
Q ss_pred CCCceeEEEecC---CCCeEEEEecCCCC--ccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHH
Q 012188 168 DCDCKFCTCWSS---SSRDTLFVKTQGPS--AFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMI 242 (468)
Q Consensus 168 d~~~~~~~~~~~---~~p~vl~lHG~g~s--~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di 242 (468)
+|..+.++.+.+ ++|+|||+||++++ ..++..+.+.|. ++||+|+++|+||||.|+.+.. .+++.++++|+
T Consensus 30 ~g~~l~~~~~~p~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~---~~G~~v~~~d~~G~G~s~~~~~-~~~~~~~~~d~ 105 (270)
T 3pfb_A 30 DGLQLVGTREEPFGEIYDMAIIFHGFTANRNTSLLREIANSLR---DENIASVRFDFNGHGDSDGKFE-NMTVLNEIEDA 105 (270)
T ss_dssp TTEEEEEEEEECSSSSEEEEEEECCTTCCTTCHHHHHHHHHHH---HTTCEEEEECCTTSTTSSSCGG-GCCHHHHHHHH
T ss_pred CCEEEEEEEEcCCCCCCCEEEEEcCCCCCccccHHHHHHHHHH---hCCcEEEEEccccccCCCCCCC-ccCHHHHHHhH
Confidence 566678877753 35789999999876 445566777776 4799999999999999987543 47888888888
Q ss_pred HHHHhccc----CCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhh
Q 012188 243 EKSVIEPN----KVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGA 318 (468)
Q Consensus 243 ~~~l~~~l----~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (468)
..+++.+ +.++++++||||||.+++.++.++|++++++|+++|+... .............+.......
T Consensus 106 -~~~i~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 177 (270)
T 3pfb_A 106 -NAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATL-------KGDALEGNTQGVTYNPDHIPD 177 (270)
T ss_dssp -HHHHHHHHTCTTEEEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCTHH-------HHHHHHTEETTEECCTTSCCS
T ss_pred -HHHHHHHHhCcCCCeEEEEEeCchhHHHHHHHHhCchhhcEEEEecccccc-------chhhhhhhhhccccCcccccc
Confidence 4666654 7789999999999999999999999999999999987532 111111100000000000000
Q ss_pred hhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCC
Q 012188 319 SMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKC 398 (468)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 398 (468)
.... ....... .... .. ........+.++++
T Consensus 178 ~~~~--------------~~~~~~~-------------------------~~~~----~~------~~~~~~~~~~~~~~ 208 (270)
T 3pfb_A 178 RLPF--------------KDLTLGG-------------------------FYLR----IA------QQLPIYEVSAQFTK 208 (270)
T ss_dssp EEEE--------------TTEEEEH-------------------------HHHH----HH------HHCCHHHHHTTCCS
T ss_pred cccc--------------cccccch-------------------------hHhh----cc------cccCHHHHHhhCCc
Confidence 0000 0000000 0000 00 00112233467899
Q ss_pred cEEEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhcC
Q 012188 399 DVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSSS 459 (468)
Q Consensus 399 PvLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~ 459 (468)
|+++++|++|.++|.+.++.+.+.++++++++++++||+.+. ++++++.+.|.+||++..
T Consensus 209 P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~~~ 268 (270)
T 3pfb_A 209 PVCLIHGTDDTVVSPNASKKYDQIYQNSTLHLIEGADHCFSD-SYQKNAVNLTTDFLQNNN 268 (270)
T ss_dssp CEEEEEETTCSSSCTHHHHHHHHHCSSEEEEEETTCCTTCCT-HHHHHHHHHHHHHHC---
T ss_pred cEEEEEcCCCCCCCHHHHHHHHHhCCCCeEEEcCCCCcccCc-cchHHHHHHHHHHHhhcC
Confidence 999999999999999999999999999999999999999986 899999999999997643
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.1e-27 Score=220.60 Aligned_cols=236 Identities=14% Similarity=0.119 Sum_probs=160.0
Q ss_pred CCCCceeEEEecCC---CCeEEEEecCCCCc-cc-hhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHH
Q 012188 167 SDCDCKFCTCWSSS---SRDTLFVKTQGPSA-FW-TETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDM 241 (468)
Q Consensus 167 ~d~~~~~~~~~~~~---~p~vl~lHG~g~s~-~~-~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~d 241 (468)
.||..+.|..+.++ +|+|||+||++++. .| ...+.+.+. +.||+|+++|+||||.|+.+. ..+++++++++
T Consensus 20 ~~g~~l~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~l~---~~g~~v~~~d~~G~G~s~~~~-~~~~~~~~~~d 95 (270)
T 3llc_A 20 SDARSIAALVRAPAQDERPTCIWLGGYRSDMTGTKALEMDDLAA---SLGVGAIRFDYSGHGASGGAF-RDGTISRWLEE 95 (270)
T ss_dssp GGCEEEEEEEECCSSTTSCEEEEECCTTCCTTSHHHHHHHHHHH---HHTCEEEEECCTTSTTCCSCG-GGCCHHHHHHH
T ss_pred cCcceEEEEeccCCCCCCCeEEEECCCccccccchHHHHHHHHH---hCCCcEEEeccccCCCCCCcc-ccccHHHHHHH
Confidence 35666777767655 89999999988764 33 333555553 379999999999999997665 35799999999
Q ss_pred HHHHHhcccCCceEEEEEEcccHHHHHHHHHh---CC---CccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhh
Q 012188 242 IEKSVIEPNKVKSFHIVAHSLGCILALALAVK---HP---GSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIA 315 (468)
Q Consensus 242 i~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~---~p---~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (468)
+ ..+++.++.++++++||||||.+++.+|.+ +| ++++++|+++|+.... ... .+....
T Consensus 96 ~-~~~~~~l~~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~il~~~~~~~~-------~~~--------~~~~~~ 159 (270)
T 3llc_A 96 A-LAVLDHFKPEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAPDFT-------SDL--------IEPLLG 159 (270)
T ss_dssp H-HHHHHHHCCSEEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEEEESCCTTHH-------HHT--------TGGGCC
T ss_pred H-HHHHHHhccCCeEEEEeChHHHHHHHHHHHHHhccccccccceeEEecCcccch-------hhh--------hhhhhh
Confidence 9 689999988999999999999999999999 99 9999999999875320 000 000000
Q ss_pred hhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhcc
Q 012188 316 FGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNH 395 (468)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (468)
......+ ....... ....+................ .......+.+
T Consensus 160 -----~~~~~~~----------------------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 204 (270)
T 3llc_A 160 -----DRERAEL----------------------AENGYFE-EVSEYSPEPNIFTRALMEDGR-------ANRVMAGMID 204 (270)
T ss_dssp -----HHHHHHH----------------------HHHSEEE-ECCTTCSSCEEEEHHHHHHHH-------HTCCTTSCCC
T ss_pred -----hhhhhhh----------------------hccCccc-ChhhcccchhHHHHHHHhhhh-------hhhhhhhhhc
Confidence 0000000 0000000 000000000000000000000 0001122467
Q ss_pred CCCcEEEEeeCCCCccChhhHHHHHHhCCC--CeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 396 VKCDVNVFHGEDDELIPVECSYNVQRKIPR--ARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 396 i~~PvLii~G~~D~~vp~~~~~~l~~~~p~--~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
+++|+++++|++|.++|.+.++.+.+.+++ +++++++++||+....+.++++.+.|.+||++
T Consensus 205 ~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 268 (270)
T 3llc_A 205 TGCPVHILQGMADPDVPYQHALKLVEHLPADDVVLTLVRDGDHRLSRPQDIDRMRNAIRAMIEP 268 (270)
T ss_dssp CCSCEEEEEETTCSSSCHHHHHHHHHTSCSSSEEEEEETTCCSSCCSHHHHHHHHHHHHHHHC-
T ss_pred CCCCEEEEecCCCCCCCHHHHHHHHHhcCCCCeeEEEeCCCcccccccccHHHHHHHHHHHhcC
Confidence 899999999999999999999999999998 89999999999766557889999999999975
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=6.3e-26 Score=225.19 Aligned_cols=277 Identities=13% Similarity=0.126 Sum_probs=167.2
Q ss_pred cCCCCceeEEEecCC--------C--CeEEEEecCCCCccchhhhhhhccccC-CCcc---eEEEECCCCCCCCCCCC--
Q 012188 166 WSDCDCKFCTCWSSS--------S--RDTLFVKTQGPSAFWTETLFPNFSSAS-KSTY---RLFAIDLLGFGRSPKPT-- 229 (468)
Q Consensus 166 ~~d~~~~~~~~~~~~--------~--p~vl~lHG~g~s~~~~~~~~~~L~~~~-~~gy---~Via~D~~G~G~S~~~~-- 229 (468)
-.||..++|..|++. + |+|||+||++++...|..+++.|.... +.|| +|+++|+||||.|+.+.
T Consensus 27 ~~dg~~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~~~~~~~~~~~~~L~~~~~~~G~~~~~vi~~D~~G~G~S~~~~~~ 106 (398)
T 2y6u_A 27 ATDRLELTYDVYTSAERQRRSRTATRLNLVFLHGSGMSKVVWEYYLPRLVAADAEGNYAIDKVLLIDQVNHGDSAVRNRG 106 (398)
T ss_dssp TTCCCEEEEEEEEESCTTTCCTTCEEEEEEEECCTTCCGGGGGGGGGGSCCCBTTTTEEEEEEEEECCTTSHHHHHHTTT
T ss_pred CCCceEEEEEEEecCCCCCCCCCCCCCeEEEEcCCCCcHHHHHHHHHHHHHhhhhcCcceeEEEEEcCCCCCCCCCCCcc
Confidence 347778888888642 2 689999999988776666777775221 2388 99999999999997543
Q ss_pred --CCCCCHHHHHHHHHHHHhcccC----Cc--eEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCC------C-
Q 012188 230 --DSLYTVREHLDMIEKSVIEPNK----VK--SFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPK------G- 294 (468)
Q Consensus 230 --~~~~t~~~~~~di~~~l~~~l~----~~--~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~------~- 294 (468)
...+++.++++|+ ..+++.+. .+ +++++||||||.+++.+|.++|++|+++|+++|....... .
T Consensus 107 ~~~~~~~~~~~~~dl-~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 185 (398)
T 2y6u_A 107 RLGTNFNWIDGARDV-LKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVVITRKAIGAGRPGL 185 (398)
T ss_dssp TBCSCCCHHHHHHHH-HHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCCCCCSCCCTTC
T ss_pred ccCCCCCcchHHHHH-HHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchheeEEEEeccccccccccccccccc
Confidence 2368999999999 57776532 34 4999999999999999999999999999999987654210 0
Q ss_pred ch----hhHHHHHhhcC--CCCCchhhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHH----hhhcccc
Q 012188 295 AQ----ASQYVMRKVAP--RRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTF----LLEGFFC 364 (468)
Q Consensus 295 ~~----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 364 (468)
.. ........+.. ...+... .....+ +... .+.. .........+........ .......
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~---~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (398)
T 2y6u_A 186 PPDSPQIPENLYNSLRLKTCDHFANE---SEYVKY---MRNG---SFFT--NAHSQILQNIIDFERTKASGDDEDGGPVR 254 (398)
T ss_dssp CTTCCCCCHHHHHHHHHTCCCEESSH---HHHHHH---HHHT---STTT--TSCHHHHHHHHHHHEEC--------CCEE
T ss_pred cccccccchhhHHHhhhhccccCCCH---HHHHHH---hhcC---cccc--cCCHHHHHHHHHhcCccccccccCCCceE
Confidence 00 00001000000 0000000 000000 0000 0000 000000000000000000 0000000
Q ss_pred ccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcH
Q 012188 365 HTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQ 444 (468)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p 444 (468)
.... ....+. .+ .............+.++++|+|+|+|++|.++|++.++.+.+.+|++++++++++||+++. ++|
T Consensus 255 ~~~~-~~~~~~-~~-~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~-e~p 330 (398)
T 2y6u_A 255 TKME-QAQNLL-CY-MNMQTFAPFLISNVKFVRKRTIHIVGARSNWCPPQNQLFLQKTLQNYHLDVIPGGSHLVNV-EAP 330 (398)
T ss_dssp ESSC-HHHHHH-TT-SCGGGTHHHHHHHGGGCCSEEEEEEETTCCSSCHHHHHHHHHHCSSEEEEEETTCCTTHHH-HSH
T ss_pred ecCC-chhhhh-hh-cccccchHHHHHhccccCCCEEEEEcCCCCCCCHHHHHHHHHhCCCceEEEeCCCCccchh-cCH
Confidence 0000 000000 00 0000011223345678899999999999999999999999999999999999999999997 899
Q ss_pred HHHHHHHHHHHhhc
Q 012188 445 KTFARELEEIWRSS 458 (468)
Q Consensus 445 ~~~~~~i~~fl~~~ 458 (468)
+++++.|.+||++.
T Consensus 331 ~~~~~~i~~fl~~~ 344 (398)
T 2y6u_A 331 DLVIERINHHIHEF 344 (398)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999753
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A | Back alignment and structure |
|---|
Probab=99.90 E-value=3.6e-29 Score=237.78 Aligned_cols=271 Identities=18% Similarity=0.168 Sum_probs=163.9
Q ss_pred CCCceeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCC----CCCCCHHHHHHHHH
Q 012188 168 DCDCKFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPT----DSLYTVREHLDMIE 243 (468)
Q Consensus 168 d~~~~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~----~~~~t~~~~~~di~ 243 (468)
+|..++|..++ ++|+|||+||++++...+..+++.|+ +||+|+++|+||||.|+.+. ...++++++++++
T Consensus 13 ~g~~~~~~~~g-~~p~vv~lHG~~~~~~~~~~~~~~l~----~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~l- 86 (304)
T 3b12_A 13 GDVTINCVVGG-SGPALLLLHGFPQNLHMWARVAPLLA----NEYTVVCADLRGYGGSSKPVGAPDHANYSFRAMASDQ- 86 (304)
Confidence 45556666655 67899999999887776666777776 89999999999999998764 3468999999999
Q ss_pred HHHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhh---cCCCC--Cchhhhhh
Q 012188 244 KSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKV---APRRV--WPLIAFGA 318 (468)
Q Consensus 244 ~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~ 318 (468)
..+++.++.++++++||||||.+++.+|.++|++|+++|+++++.................. ..... ........
T Consensus 87 ~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (304)
T 3b12_A 87 RELMRTLGFERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPTYVMFEEVDRFVARAYWHWYFLQQPAPYPEKVIGA 166 (304)
Confidence 69999999999999999999999999999999999999999986543221110000000000 00000 00000000
Q ss_pred hhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcc-cccccchHHHhhccCC
Q 012188 319 SMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGT-ANKLDGYLDAVRNHVK 397 (468)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~ 397 (468)
....+.... .......... .........+ ...+.. ..........+... ...........+.+++
T Consensus 167 ~~~~~~~~~--~~~~~~~~~~--------~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 232 (304)
T 3b12_A 167 DPDTFYEGC--LFGWGATGAD--------GFDPEQLEEY-RKQWRD---PAAIHGSCCDYRAGGTIDFELDHGDLGRQVQ 232 (304)
Confidence 000000000 0000000000 0000000000 000000 00000000000000 0001111112246789
Q ss_pred CcEEEEeeCCCC-ccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhcCC
Q 012188 398 CDVNVFHGEDDE-LIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSSSG 460 (468)
Q Consensus 398 ~PvLii~G~~D~-~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~~ 460 (468)
+|+|+|+|++|. +.|....+.+.+..|+++++++ ++||+++. ++|+++++.|.+||++...
T Consensus 233 ~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i-~~gH~~~~-e~p~~~~~~i~~fl~~~~~ 294 (304)
T 3b12_A 233 CPALVFSGSAGLMHSLFEMQVVWAPRLANMRFASL-PGGHFFVD-RFPDDTARILREFLSDARS 294 (304)
Confidence 999999999995 4466777778888899999999 99999997 9999999999999987644
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.94 E-value=3.9e-26 Score=218.80 Aligned_cols=223 Identities=9% Similarity=0.062 Sum_probs=139.0
Q ss_pred CCCceeEEEecC------CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCC-CCCCCCCCCCCCHHHHHH
Q 012188 168 DCDCKFCTCWSS------SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGF-GRSPKPTDSLYTVREHLD 240 (468)
Q Consensus 168 d~~~~~~~~~~~------~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~-G~S~~~~~~~~t~~~~~~ 240 (468)
||..+++..+++ ++|+|||+||++++...|..+.+.|+ ++||+|+++|+||| |.|+++. ..++++++++
T Consensus 16 dG~~l~~~~~~p~~~~~~~~~~VvllHG~g~~~~~~~~~~~~L~---~~G~~Vi~~D~rGh~G~S~~~~-~~~~~~~~~~ 91 (305)
T 1tht_A 16 NGQELHVWETPPKENVPFKNNTILIASGFARRMDHFAGLAEYLS---TNGFHVFRYDSLHHVGLSSGSI-DEFTMTTGKN 91 (305)
T ss_dssp TTEEEEEEEECCCTTSCCCSCEEEEECTTCGGGGGGHHHHHHHH---TTTCCEEEECCCBCC---------CCCHHHHHH
T ss_pred CCCEEEEEEecCcccCCCCCCEEEEecCCccCchHHHHHHHHHH---HCCCEEEEeeCCCCCCCCCCcc-cceehHHHHH
Confidence 555677776653 46899999999987766666888886 46899999999999 9998654 3578999988
Q ss_pred HHHHHHhcc---cCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhh
Q 012188 241 MIEKSVIEP---NKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFG 317 (468)
Q Consensus 241 di~~~l~~~---l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (468)
|+ ..+++. ++.++++|+||||||.+|+.+|.+ | +++++|++++.... ........... +.....
T Consensus 92 D~-~~~~~~l~~~~~~~~~lvGhSmGG~iA~~~A~~-~-~v~~lvl~~~~~~~-------~~~~~~~~~~~--~~~~~~- 158 (305)
T 1tht_A 92 SL-CTVYHWLQTKGTQNIGLIAASLSARVAYEVISD-L-ELSFLITAVGVVNL-------RDTLEKALGFD--YLSLPI- 158 (305)
T ss_dssp HH-HHHHHHHHHTTCCCEEEEEETHHHHHHHHHTTT-S-CCSEEEEESCCSCH-------HHHHHHHHSSC--GGGSCG-
T ss_pred HH-HHHHHHHHhCCCCceEEEEECHHHHHHHHHhCc-c-CcCEEEEecCchhH-------HHHHHHHhhhh--hhhcch-
Confidence 88 466654 588899999999999999999998 7 89999998864311 11111110000 000000
Q ss_pred hhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCC
Q 012188 318 ASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVK 397 (468)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 397 (468)
..+..... .... . .....+ ........... .......+.+++
T Consensus 159 -------~~~~~~~~-~~~~--~-------------------------~~~~~~--~~~~~~~~~~~-~~~~~~~l~~i~ 200 (305)
T 1tht_A 159 -------DELPNDLD-FEGH--K-------------------------LGSEVF--VRDCFEHHWDT-LDSTLDKVANTS 200 (305)
T ss_dssp -------GGCCSEEE-ETTE--E-------------------------EEHHHH--HHHHHHTTCSS-HHHHHHHHTTCC
T ss_pred -------hhCccccc-cccc--c-------------------------cCHHHH--HHHHHhccccc-hhhHHHHHhhcC
Confidence 00000000 0000 0 000000 00000000000 011233457889
Q ss_pred CcEEEEeeCCCCccChhhHHHHHHhC--CCCeEEEecCCCccccccCcHHHH
Q 012188 398 CDVNVFHGEDDELIPVECSYNVQRKI--PRARVKVIEKKDHITIVVGRQKTF 447 (468)
Q Consensus 398 ~PvLii~G~~D~~vp~~~~~~l~~~~--p~~~l~~i~~~gH~~~~~e~p~~~ 447 (468)
+|+|+++|++|.++|++.++.+++.+ |++++++++++||.++ ++|+.+
T Consensus 201 ~PvLii~G~~D~~vp~~~~~~l~~~i~~~~~~l~~i~~agH~~~--e~p~~~ 250 (305)
T 1tht_A 201 VPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDLG--ENLVVL 250 (305)
T ss_dssp SCEEEEEETTCTTSCHHHHHHHHTTCTTCCEEEEEETTCCSCTT--SSHHHH
T ss_pred CCEEEEEeCCCCccCHHHHHHHHHhcCCCCcEEEEeCCCCCchh--hCchHH
Confidence 99999999999999999999999987 5789999999999985 788744
|
| >1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=5.9e-26 Score=222.86 Aligned_cols=277 Identities=13% Similarity=0.109 Sum_probs=163.0
Q ss_pred cCCCCceeEEEe--c-------CCCCeEEEEecCCCCccchhhhhh------hccccCCCcceEEEECCCCCCCCCCC--
Q 012188 166 WSDCDCKFCTCW--S-------SSSRDTLFVKTQGPSAFWTETLFP------NFSSASKSTYRLFAIDLLGFGRSPKP-- 228 (468)
Q Consensus 166 ~~d~~~~~~~~~--~-------~~~p~vl~lHG~g~s~~~~~~~~~------~L~~~~~~gy~Via~D~~G~G~S~~~-- 228 (468)
..||..+.++.+ + +++|+|||+||++++...+..+.+ .|+ ++||+|+++|+||||.|+..
T Consensus 34 ~~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~~~~~~~~~~~~~a~~l~---~~G~~vi~~D~~G~G~S~~~~~ 110 (377)
T 1k8q_A 34 TEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILA---DAGYDVWLGNSRGNTWARRNLY 110 (377)
T ss_dssp CTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHH---HTTCEEEECCCTTSTTSCEESS
T ss_pred cCCCCEEEEEEecCCCCCccccCCCCeEEEECCCCCchhhhhcCCCcccHHHHHH---HCCCCEEEecCCCCCCCCCCCC
Confidence 346767777776 2 257899999999887664444444 555 46899999999999999763
Q ss_pred ---CCC---CCCHHHHHH-HHH---HHHhcccCCceEEEEEEcccHHHHHHHHHhCCC---ccceEEEecCCCCCCCCCc
Q 012188 229 ---TDS---LYTVREHLD-MIE---KSVIEPNKVKSFHIVAHSLGCILALALAVKHPG---SVKSLTLLAPPYYPVPKGA 295 (468)
Q Consensus 229 ---~~~---~~t~~~~~~-di~---~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~---~v~~lVl~~p~~~~~~~~~ 295 (468)
... .++++++++ |+. ..++++++.++++++||||||.+++.+|.++|+ +|+++|+++|.........
T Consensus 111 ~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~v~~lvl~~~~~~~~~~~~ 190 (377)
T 1k8q_A 111 YSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVATVKYTET 190 (377)
T ss_dssp SCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEESCCSCCSSCCS
T ss_pred CCCCcccccCccHHHHHhhhHHHHHHHHHHhcCcCceEEEEechhhHHHHHHHhcCchhhhhhhEEEEeCCchhcccchh
Confidence 221 578998888 763 234556888999999999999999999999998 8999999998764422111
Q ss_pred hhh-------HHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHHhhccchhHHHHH---H--------HHhhhHHHHH
Q 012188 296 QAS-------QYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLA---K--------LVTRNRIRTF 357 (468)
Q Consensus 296 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--------~~~~~~~~~~ 357 (468)
... .............+.... ... +.. ..+.......... . .........+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (377)
T 1k8q_A 191 LINKLMLVPSFLFKLIFGNKIFYPHHFF----DQF---LAT----EVCSRETVDLLCSNALFIICGFDTMNLNMSRLDVY 259 (377)
T ss_dssp GGGGGGTSCHHHHHHHSCSSEESCCCHH----HHH---HHH----HTTTBTTTHHHHHHHHHHHHCCCGGGSCGGGHHHH
T ss_pred HHHHHHhhccHHHHhhcCccccCcHHHH----HHH---HHH----HhhCCccHHHHHHHHHHHhcCCCcccCCHHHHHHH
Confidence 100 001111110000000000 000 000 0000000000000 0 0000000000
Q ss_pred hhhccccccchhHHhhHhHHH-hcccccccc-----h---------HHHhhccCCCcEEEEeeCCCCccChhhHHHHHHh
Q 012188 358 LLEGFFCHTHNAAWHTLHNII-CGTANKLDG-----Y---------LDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRK 422 (468)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----~---------~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~ 422 (468)
.. .............+.... .......+. . ....+.++++|+|+++|++|.++|++.++.+.+.
T Consensus 260 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~ 338 (377)
T 1k8q_A 260 LS-HNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLLSK 338 (377)
T ss_dssp HT-TCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHTT
T ss_pred hc-cCCCCccHHHHHHHHHHHhcCCeeeccCCcchhhHHHcCCCCCcccCHhhCCCCEEEEEeCCCcccCHHHHHHHHHh
Confidence 00 000000000000000000 000000000 0 0112578899999999999999999999999999
Q ss_pred CCCCe-EEEecCCCccccc--cCcHHHHHHHHHHHHhh
Q 012188 423 IPRAR-VKVIEKKDHITIV--VGRQKTFARELEEIWRS 457 (468)
Q Consensus 423 ~p~~~-l~~i~~~gH~~~~--~e~p~~~~~~i~~fl~~ 457 (468)
+|+++ +++++++||+.++ .++|+++.+.|.+||++
T Consensus 339 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~ 376 (377)
T 1k8q_A 339 LPNLIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGT 376 (377)
T ss_dssp CTTEEEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHT
T ss_pred CcCcccEEecCCCCceEEEecCCcHHHHHHHHHHHhcc
Confidence 99987 9999999999985 48999999999999975
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-25 Score=201.25 Aligned_cols=187 Identities=20% Similarity=0.325 Sum_probs=156.1
Q ss_pred CCCceeEEEe--cCCCCeEEEEecCCCCccchhh--hhhhccccCCCcceEEEECCCCCCCC---CCCCCCCC-CHHHHH
Q 012188 168 DCDCKFCTCW--SSSSRDTLFVKTQGPSAFWTET--LFPNFSSASKSTYRLFAIDLLGFGRS---PKPTDSLY-TVREHL 239 (468)
Q Consensus 168 d~~~~~~~~~--~~~~p~vl~lHG~g~s~~~~~~--~~~~L~~~~~~gy~Via~D~~G~G~S---~~~~~~~~-t~~~~~ 239 (468)
++..++...+ .+++|+||++||++++...+.. +.+.|. ++||+|+++|+||+|.| +.+. ..+ +.++++
T Consensus 12 ~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~---~~G~~v~~~d~~g~g~s~~~~~~~-~~~~~~~~~~ 87 (207)
T 3bdi_A 12 NGTRVFQRKMVTDSNRRSIALFHGYSFTSMDWDKADLFNNYS---KIGYNVYAPDYPGFGRSASSEKYG-IDRGDLKHAA 87 (207)
T ss_dssp TTEEEEEEEECCTTCCEEEEEECCTTCCGGGGGGGTHHHHHH---TTTEEEEEECCTTSTTSCCCTTTC-CTTCCHHHHH
T ss_pred CCcEEEEEEEeccCCCCeEEEECCCCCCccccchHHHHHHHH---hCCCeEEEEcCCcccccCcccCCC-CCcchHHHHH
Confidence 4444552222 3367899999999988776666 777776 57899999999999999 6554 345 899999
Q ss_pred HHHHHHHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhh
Q 012188 240 DMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGAS 319 (468)
Q Consensus 240 ~di~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (468)
+++ ..+++.++.++++++|||+||.+++.++.++|++++++|+++|+... . .
T Consensus 88 ~~~-~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~---~---~--------------------- 139 (207)
T 3bdi_A 88 EFI-RDYLKANGVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPAWVE---S---L--------------------- 139 (207)
T ss_dssp HHH-HHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCG---G---G---------------------
T ss_pred HHH-HHHHHHcCCCceEEEEECccHHHHHHHHHhCchhheEEEEeCCcccc---c---h---------------------
Confidence 999 68999999899999999999999999999999999999999987321 0 0
Q ss_pred hHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCc
Q 012188 320 MACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCD 399 (468)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 399 (468)
...+.++++|
T Consensus 140 ----------------------------------------------------------------------~~~~~~~~~p 149 (207)
T 3bdi_A 140 ----------------------------------------------------------------------KGDMKKIRQK 149 (207)
T ss_dssp ----------------------------------------------------------------------HHHHTTCCSC
T ss_pred ----------------------------------------------------------------------hHHHhhccCC
Confidence 0012466899
Q ss_pred EEEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 400 VNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 400 vLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
+++++|++|.++|.+..+.+.+.++++++++++++||..+. ++++++.+.|.+||++
T Consensus 150 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~-~~~~~~~~~i~~fl~~ 206 (207)
T 3bdi_A 150 TLLVWGSKDHVVPIALSKEYASIISGSRLEIVEGSGHPVYI-EKPEEFVRITVDFLRN 206 (207)
T ss_dssp EEEEEETTCTTTTHHHHHHHHHHSTTCEEEEETTCCSCHHH-HSHHHHHHHHHHHHHT
T ss_pred EEEEEECCCCccchHHHHHHHHhcCCceEEEeCCCCCCccc-cCHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999987 8899999999999975
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A | Back alignment and structure |
|---|
Probab=99.94 E-value=4.4e-26 Score=210.12 Aligned_cols=225 Identities=12% Similarity=0.089 Sum_probs=153.8
Q ss_pred cCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCC-CHHHHHHHHHHHHhcccC--Cce
Q 012188 178 SSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLY-TVREHLDMIEKSVIEPNK--VKS 254 (468)
Q Consensus 178 ~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~-t~~~~~~di~~~l~~~l~--~~~ 254 (468)
.+++|+|||+||++++...+..+.+.|. ++||+|+++|+||||.|+....... +.+++++++ ..+++.+. .++
T Consensus 19 ~~~~~~vv~~HG~~~~~~~~~~~~~~l~---~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~d~-~~~i~~l~~~~~~ 94 (251)
T 3dkr_A 19 EGTDTGVVLLHAYTGSPNDMNFMARALQ---RSGYGVYVPLFSGHGTVEPLDILTKGNPDIWWAES-SAAVAHMTAKYAK 94 (251)
T ss_dssp CCSSEEEEEECCTTCCGGGGHHHHHHHH---HTTCEEEECCCTTCSSSCTHHHHHHCCHHHHHHHH-HHHHHHHHTTCSE
T ss_pred CCCCceEEEeCCCCCCHHHHHHHHHHHH---HCCCEEEecCCCCCCCCChhhhcCcccHHHHHHHH-HHHHHHHHHhcCC
Confidence 4567899999999988776667888776 4799999999999999965443223 788888888 46665544 359
Q ss_pred EEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHH
Q 012188 255 FHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLL 334 (468)
Q Consensus 255 i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (468)
++++||||||.+++.+|.++|+.++++++++|........ .... ..+.+.....
T Consensus 95 ~~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~~~---~~~~-----------------------~~~~~~~~~~ 148 (251)
T 3dkr_A 95 VFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHL---VPGF-----------------------LKYAEYMNRL 148 (251)
T ss_dssp EEEEESHHHHHHHHHHHHHCSSCCEEEESSCCCCTTCBCH---HHHH-----------------------HHHHHHHHHH
T ss_pred eEEEEechHHHHHHHHHHhCccceeeEEEecchhhccchh---hHHH-----------------------HHHHHHHHhh
Confidence 9999999999999999999999999999998876542211 0000 0000000000
Q ss_pred hhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChh
Q 012188 335 ICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVE 414 (468)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~ 414 (468)
..... ..... ....... ...+... .......+.++++|+++++|++|.++|++
T Consensus 149 ~~~~~-~~~~~---------~~~~~~~---------~~~~~~~--------~~~~~~~~~~~~~P~l~i~g~~D~~~~~~ 201 (251)
T 3dkr_A 149 AGKSD-ESTQI---------LAYLPGQ---------LAAIDQF--------ATTVAADLNLVKQPTFIGQAGQDELVDGR 201 (251)
T ss_dssp HTCCC-CHHHH---------HHHHHHH---------HHHHHHH--------HHHHHHTGGGCCSCEEEEEETTCSSBCTT
T ss_pred cccCc-chhhH---------HhhhHHH---------HHHHHHH--------HHHHhccccccCCCEEEEecCCCcccChH
Confidence 00000 00000 0000000 0000000 01122334678999999999999999999
Q ss_pred hHHHHHHhCCC-C--eEEEecCCCccccccCcHHHHHHHHHHHHhhcC
Q 012188 415 CSYNVQRKIPR-A--RVKVIEKKDHITIVVGRQKTFARELEEIWRSSS 459 (468)
Q Consensus 415 ~~~~l~~~~p~-~--~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~ 459 (468)
.++.+.+.+++ . ++++++++||+.+.+.+++++.+.|.+||++..
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 249 (251)
T 3dkr_A 202 LAYQLRDALINAARVDFHWYDDAKHVITVNSAHHALEEDVIAFMQQEN 249 (251)
T ss_dssp HHHHHHHHCTTCSCEEEEEETTCCSCTTTSTTHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCCCceEEEeCCCCcccccccchhHHHHHHHHHHHhhc
Confidence 99999999887 5 899999999999873359999999999998753
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.7e-25 Score=207.46 Aligned_cols=228 Identities=14% Similarity=0.194 Sum_probs=154.5
Q ss_pred CCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceEEEE
Q 012188 179 SSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIV 258 (468)
Q Consensus 179 ~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i~lv 258 (468)
+++|+|||+||++++...+..+.+.|. ++|+|+++|+||||.|+.+. ..++++++++++ ..+++.++.++++|+
T Consensus 18 ~~~~~vv~~HG~~~~~~~~~~~~~~l~----~~~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~~-~~~l~~~~~~~~~lv 91 (267)
T 3fla_A 18 DARARLVCLPHAGGSASFFFPLAKALA----PAVEVLAVQYPGRQDRRHEP-PVDSIGGLTNRL-LEVLRPFGDRPLALF 91 (267)
T ss_dssp TCSEEEEEECCTTCCGGGGHHHHHHHT----TTEEEEEECCTTSGGGTTSC-CCCSHHHHHHHH-HHHTGGGTTSCEEEE
T ss_pred CCCceEEEeCCCCCCchhHHHHHHHhc----cCcEEEEecCCCCCCCCCCC-CCcCHHHHHHHH-HHHHHhcCCCceEEE
Confidence 457899999999988776667888887 67999999999999997655 357999999999 689999998999999
Q ss_pred EEcccHHHHHHHHHhCCCc----cceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHH
Q 012188 259 AHSLGCILALALAVKHPGS----VKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLL 334 (468)
Q Consensus 259 GhS~Gg~ial~~a~~~p~~----v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (468)
||||||.+|+.+|.++|++ +++++++++......... ....... ..+...+...
T Consensus 92 G~S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~-----------~~~~~~~-------~~~~~~~~~~---- 149 (267)
T 3fla_A 92 GHSMGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDD-----------DVRGASD-------ERLVAELRKL---- 149 (267)
T ss_dssp EETHHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCS-----------CTTCCCH-------HHHHHHHHHT----
T ss_pred EeChhHHHHHHHHHhhhhhccccccEEEECCCCccccccch-----------hhcccch-------HHHHHHHHHh----
Confidence 9999999999999999986 999999987643322110 0000000 0000000000
Q ss_pred hhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChh
Q 012188 335 ICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVE 414 (468)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~ 414 (468)
.... ................+. ...... ... ... ....+++|+++++|++|.++|++
T Consensus 150 ----~~~~---~~~~~~~~~~~~~~~~~~-----~~~~~~----~~~--~~~-----~~~~~~~P~l~i~g~~D~~~~~~ 206 (267)
T 3fla_A 150 ----GGSD---AAMLADPELLAMVLPAIR-----SDYRAV----ETY--RHE-----PGRRVDCPVTVFTGDHDPRVSVG 206 (267)
T ss_dssp ----CHHH---HHHHHSHHHHHHHHHHHH-----HHHHHH----HHC--CCC-----TTCCBSSCEEEEEETTCTTCCHH
T ss_pred ----cCcc---hhhccCHHHHHHHHHHHH-----HHHHhh----hcc--ccc-----ccCcCCCCEEEEecCCCCCCCHH
Confidence 0000 000000000000000000 000000 000 000 01467999999999999999999
Q ss_pred hHHHHHHhCCC-CeEEEecCCCccccccCcHHHHHHHHHHHHhhcC
Q 012188 415 CSYNVQRKIPR-ARVKVIEKKDHITIVVGRQKTFARELEEIWRSSS 459 (468)
Q Consensus 415 ~~~~l~~~~p~-~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~ 459 (468)
..+.+.+.+++ ++++++++ ||+.+. ++|+++.+.|.+||++..
T Consensus 207 ~~~~~~~~~~~~~~~~~~~g-gH~~~~-~~~~~~~~~i~~fl~~~~ 250 (267)
T 3fla_A 207 EARAWEEHTTGPADLRVLPG-GHFFLV-DQAAPMIATMTEKLAGPA 250 (267)
T ss_dssp HHHGGGGGBSSCEEEEEESS-STTHHH-HTHHHHHHHHHHHTC---
T ss_pred HHHHHHHhcCCCceEEEecC-Cceeec-cCHHHHHHHHHHHhcccc
Confidence 99999999988 89999998 999997 899999999999998653
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2.4e-25 Score=208.53 Aligned_cols=228 Identities=14% Similarity=0.168 Sum_probs=155.6
Q ss_pred ecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccC--Cce
Q 012188 177 WSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNK--VKS 254 (468)
Q Consensus 177 ~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~--~~~ 254 (468)
..+++|+|||+||++++...+..+.+.|. ++||+|+++|+||||.|+.+. ..++++++++++ ..+++.+. .++
T Consensus 36 ~~g~~~~vv~~HG~~~~~~~~~~~~~~l~---~~G~~v~~~d~~G~G~s~~~~-~~~~~~~~~~d~-~~~i~~l~~~~~~ 110 (270)
T 3rm3_A 36 AENGPVGVLLVHGFTGTPHSMRPLAEAYA---KAGYTVCLPRLKGHGTHYEDM-ERTTFHDWVASV-EEGYGWLKQRCQT 110 (270)
T ss_dssp ECCSSEEEEEECCTTCCGGGTHHHHHHHH---HTTCEEEECCCTTCSSCHHHH-HTCCHHHHHHHH-HHHHHHHHTTCSE
T ss_pred cCCCCeEEEEECCCCCChhHHHHHHHHHH---HCCCEEEEeCCCCCCCCcccc-ccCCHHHHHHHH-HHHHHHHHhhCCc
Confidence 35677999999999987776667888777 469999999999999997533 346899999999 68888776 789
Q ss_pred EEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHH
Q 012188 255 FHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLL 334 (468)
Q Consensus 255 i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (468)
++++||||||.+++.+|.++|+ ++++|+++|+... .. ................. .. .....
T Consensus 111 i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~-------~~-~~~~~~~~~~~~~~~~~-~~----~~~~~----- 171 (270)
T 3rm3_A 111 IFVTGLSMGGTLTLYLAEHHPD-ICGIVPINAAVDI-------PA-IAAGMTGGGELPRYLDS-IG----SDLKN----- 171 (270)
T ss_dssp EEEEEETHHHHHHHHHHHHCTT-CCEEEEESCCSCC-------HH-HHHHSCC---CCSEEEC-CC----CCCSC-----
T ss_pred EEEEEEcHhHHHHHHHHHhCCC-ccEEEEEcceecc-------cc-cccchhcchhHHHHHHH-hC----ccccc-----
Confidence 9999999999999999999999 9999999987643 11 11111110000000000 00 00000
Q ss_pred hhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChh
Q 012188 335 ICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVE 414 (468)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~ 414 (468)
.. ................+.... ......+.++++|+++++|++|.++|++
T Consensus 172 -----------------~~----~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~P~lii~G~~D~~~~~~ 222 (270)
T 3rm3_A 172 -----------------PD----VKELAYEKTPTASLLQLARLM--------AQTKAKLDRIVCPALIFVSDEDHVVPPG 222 (270)
T ss_dssp -----------------TT----CCCCCCSEEEHHHHHHHHHHH--------HHHHHTGGGCCSCEEEEEETTCSSSCTT
T ss_pred -----------------cc----hHhhcccccChhHHHHHHHHH--------HHHHhhhhhcCCCEEEEECCCCcccCHH
Confidence 00 000000000000000000000 1122334678999999999999999999
Q ss_pred hHHHHHHhCCCC--eEEEecCCCccccccCcH-HHHHHHHHHHHhhc
Q 012188 415 CSYNVQRKIPRA--RVKVIEKKDHITIVVGRQ-KTFARELEEIWRSS 458 (468)
Q Consensus 415 ~~~~l~~~~p~~--~l~~i~~~gH~~~~~e~p-~~~~~~i~~fl~~~ 458 (468)
.++.+.+.+++. ++++++++||+.+. +.+ +++.+.|.+||++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~~i~~fl~~~ 268 (270)
T 3rm3_A 223 NADIIFQGISSTEKEIVRLRNSYHVATL-DYDQPMIIERSLEFFAKH 268 (270)
T ss_dssp HHHHHHHHSCCSSEEEEEESSCCSCGGG-STTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCcceEEEeCCCCccccc-CccHHHHHHHHHHHHHhc
Confidence 999999999876 99999999999997 655 89999999999874
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 | Back alignment and structure |
|---|
Probab=99.93 E-value=3.8e-26 Score=205.76 Aligned_cols=187 Identities=16% Similarity=0.209 Sum_probs=153.4
Q ss_pred CCCceeEEEe----cCCCCeEEEEecCCCCccchhh--hhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHH--
Q 012188 168 DCDCKFCTCW----SSSSRDTLFVKTQGPSAFWTET--LFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHL-- 239 (468)
Q Consensus 168 d~~~~~~~~~----~~~~p~vl~lHG~g~s~~~~~~--~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~-- 239 (468)
++..++|..+ ++++|+||++||++++...+.. +.+.|. ++||+|+++|+||+|.|+.+. ...++.+.+
T Consensus 15 ~g~~l~~~~~~p~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~---~~G~~v~~~d~~g~g~s~~~~-~~~~~~~~~~~ 90 (210)
T 1imj_A 15 QGQALFFREALPGSGQARFSVLLLHGIRFSSETWQNLGTLHRLA---QAGYRAVAIDLPGLGHSKEAA-APAPIGELAPG 90 (210)
T ss_dssp TTEEECEEEEECSSSCCSCEEEECCCTTCCHHHHHHHTHHHHHH---HTTCEEEEECCTTSGGGTTSC-CSSCTTSCCCT
T ss_pred CCeEEEEEEeCCCCCCCCceEEEECCCCCccceeecchhHHHHH---HCCCeEEEecCCCCCCCCCCC-CcchhhhcchH
Confidence 5667778777 2357899999999987775555 366665 478999999999999997765 235566666
Q ss_pred HHHHHHHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhh
Q 012188 240 DMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGAS 319 (468)
Q Consensus 240 ~di~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (468)
+++ ..+++.++.++++++|||+||.+++.++.++|++++++|+++|......
T Consensus 91 ~~~-~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~--------------------------- 142 (210)
T 1imj_A 91 SFL-AAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDKI--------------------------- 142 (210)
T ss_dssp HHH-HHHHHHHTCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGGS---------------------------
T ss_pred HHH-HHHHHHhCCCCeEEEEECchHHHHHHHHHhCccccceEEEeCCCccccc---------------------------
Confidence 788 5888888889999999999999999999999999999999998642100
Q ss_pred hHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCc
Q 012188 320 MACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCD 399 (468)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 399 (468)
....+.++++|
T Consensus 143 ---------------------------------------------------------------------~~~~~~~~~~p 153 (210)
T 1imj_A 143 ---------------------------------------------------------------------NAANYASVKTP 153 (210)
T ss_dssp ---------------------------------------------------------------------CHHHHHTCCSC
T ss_pred ---------------------------------------------------------------------cchhhhhCCCC
Confidence 00112456899
Q ss_pred EEEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 400 VNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 400 vLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
+++++|++|. +|.+..+.+ +.++++++++++++||+.+. ++|+++.+.|.+|+++.
T Consensus 154 ~l~i~g~~D~-~~~~~~~~~-~~~~~~~~~~~~~~~H~~~~-~~~~~~~~~i~~fl~~~ 209 (210)
T 1imj_A 154 ALIVYGDQDP-MGQTSFEHL-KQLPNHRVLIMKGAGHPCYL-DKPEEWHTGLLDFLQGL 209 (210)
T ss_dssp EEEEEETTCH-HHHHHHHHH-TTSSSEEEEEETTCCTTHHH-HCHHHHHHHHHHHHHTC
T ss_pred EEEEEcCccc-CCHHHHHHH-hhCCCCCEEEecCCCcchhh-cCHHHHHHHHHHHHHhc
Confidence 9999999999 999999999 88999999999999999887 88999999999999763
|
| >1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.93 E-value=4.9e-26 Score=217.31 Aligned_cols=239 Identities=14% Similarity=0.108 Sum_probs=151.8
Q ss_pred cCCCCeEEEEecCCCCccchhhhhhhccccCCC--cceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceE
Q 012188 178 SSSSRDTLFVKTQGPSAFWTETLFPNFSSASKS--TYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSF 255 (468)
Q Consensus 178 ~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~--gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i 255 (468)
.+++|+|||+||++++...|..+.+.|+ ++ ||+|+++|+||||.|..+.. ++++++++++ ..+++.+ .+++
T Consensus 33 ~~~~~~vvllHG~~~~~~~~~~~~~~L~---~~~~g~~vi~~D~~G~G~s~~~~~--~~~~~~~~~l-~~~~~~~-~~~~ 105 (302)
T 1pja_A 33 RASYKPVIVVHGLFDSSYSFRHLLEYIN---ETHPGTVVTVLDLFDGRESLRPLW--EQVQGFREAV-VPIMAKA-PQGV 105 (302)
T ss_dssp --CCCCEEEECCTTCCGGGGHHHHHHHH---HHSTTCCEEECCSSCSGGGGSCHH--HHHHHHHHHH-HHHHHHC-TTCE
T ss_pred cCCCCeEEEECCCCCChhHHHHHHHHHH---hcCCCcEEEEeccCCCccchhhHH--HHHHHHHHHH-HHHhhcC-CCcE
Confidence 3457899999999987776667888887 34 79999999999999976542 5788888888 6888877 6899
Q ss_pred EEEEEcccHHHHHHHHHhCCC-ccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHH
Q 012188 256 HIVAHSLGCILALALAVKHPG-SVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLL 334 (468)
Q Consensus 256 ~lvGhS~Gg~ial~~a~~~p~-~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (468)
+++||||||.+++.+|.++|+ +|+++|+++++....... ........ .. ..... .....+......
T Consensus 106 ~lvGhS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~---~~~~~~~~-~~-~~~~~----~~~~~~~~~~~~---- 172 (302)
T 1pja_A 106 HLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGD---TDYLKWLF-PT-SMRSN----LYRICYSPWGQE---- 172 (302)
T ss_dssp EEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCTTCBCSC---CHHHHHHC-TT-CCHHH----HHHHHTSTTGGG----
T ss_pred EEEEECHHHHHHHHHHHhcCccccCEEEEECCCccccccc---chhhhhHH-HH-HHHHH----HhhccchHHHHH----
Confidence 999999999999999999999 799999999876432211 01111100 00 00000 000000000000
Q ss_pred hhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhccccc-ccchHHHhhccCCCcEEEEeeCCCCccCh
Q 012188 335 ICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANK-LDGYLDAVRNHVKCDVNVFHGEDDELIPV 413 (468)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~PvLii~G~~D~~vp~ 413 (468)
.. ...++. .......+.. ...+...+...... ........+.+++ |+++++|++|.++|+
T Consensus 173 ~~-~~~~~~------~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~l~~i~-P~lii~G~~D~~v~~ 233 (302)
T 1pja_A 173 FS-ICNYWH------DPHHDDLYLN-----------ASSFLALINGERDHPNATVWRKNFLRVG-HLVLIGGPDDGVITP 233 (302)
T ss_dssp ST-GGGGBC------CTTCHHHHHH-----------HCSSHHHHTTSSCCTTHHHHHHHHTTCS-EEEEEECTTCSSSSS
T ss_pred hh-hhhccc------Chhhhhhhhc-----------cchHHHHhhcCCccccchhHHHHHhccC-cEEEEEeCCCCccch
Confidence 00 000000 0000000000 00000001010000 0111344567889 999999999999999
Q ss_pred hhHHHHHHhCCC---------------------------CeEEEecCCCccccccCcHHHHHHHHHHHHh
Q 012188 414 ECSYNVQRKIPR---------------------------ARVKVIEKKDHITIVVGRQKTFARELEEIWR 456 (468)
Q Consensus 414 ~~~~~l~~~~p~---------------------------~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~ 456 (468)
+.++.+.+..++ +++++++++||+++. |+|+++++.|.+||+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~ 302 (302)
T 1pja_A 234 WQSSFFGFYDANETVLEMEEQLVYLRDSFGLKTLLARGAIVRCPMAGISHTAWH-SNRTLYETCIEPWLS 302 (302)
T ss_dssp GGGGGTCEECTTCCEECGGGSHHHHTTTTSHHHHHHTTCEEEEECSSCCTTTTT-SCHHHHHHHTGGGCC
T ss_pred hHhhHhhhcCCcccccchhhhhhhhhhhhchhhHhhcCCeEEEEecCccccccc-cCHHHHHHHHHHhcC
Confidence 988888766666 899999999999997 899999999999873
|
| >4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-24 Score=215.60 Aligned_cols=122 Identities=9% Similarity=0.074 Sum_probs=103.6
Q ss_pred CCCceeEEEe---cCCCCeEEEEecCCCCccchhhhhhhccccC------CCcceEEEECCCCCCCCCCCCCCCCCHHHH
Q 012188 168 DCDCKFCTCW---SSSSRDTLFVKTQGPSAFWTETLFPNFSSAS------KSTYRLFAIDLLGFGRSPKPTDSLYTVREH 238 (468)
Q Consensus 168 d~~~~~~~~~---~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~------~~gy~Via~D~~G~G~S~~~~~~~~t~~~~ 238 (468)
+|..++|..+ .+++++|||+||++++...+..+++.|.+.. +.+|+|+++|+||||.|+.+....+++.++
T Consensus 76 ~g~~i~~~~~~~~~~~~~plll~HG~~~s~~~~~~~~~~L~~~~~~~~~~~~~~~vi~~dl~G~G~S~~~~~~~~~~~~~ 155 (388)
T 4i19_A 76 DGATIHFLHVRSPEPDATPMVITHGWPGTPVEFLDIIGPLTDPRAHGGDPADAFHLVIPSLPGFGLSGPLKSAGWELGRI 155 (388)
T ss_dssp TTEEEEEEEECCSSTTCEEEEEECCTTCCGGGGHHHHHHHHCGGGGTSCGGGCEEEEEECCTTSGGGCCCSSCCCCHHHH
T ss_pred CCeEEEEEEccCCCCCCCeEEEECCCCCCHHHHHHHHHHHhCcccccCCCCCCeEEEEEcCCCCCCCCCCCCCCCCHHHH
Confidence 5666777666 2456899999999988776667888888100 009999999999999998887657899999
Q ss_pred HHHHHHHHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCC
Q 012188 239 LDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 239 ~~di~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~ 290 (468)
++++ ..++++++.++++++||||||.+++.+|.++|++|+++++++|...+
T Consensus 156 a~~~-~~l~~~lg~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 206 (388)
T 4i19_A 156 AMAW-SKLMASLGYERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNLLQTNL 206 (388)
T ss_dssp HHHH-HHHHHHTTCSSEEEEESTHHHHHHHHHHHHCGGGEEEEEESSCCCCB
T ss_pred HHHH-HHHHHHcCCCcEEEEeccHHHHHHHHHHHhChhhceEEEEecCCCCC
Confidence 9999 69999999999999999999999999999999999999999976554
|
| >3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=9.4e-26 Score=224.00 Aligned_cols=116 Identities=11% Similarity=0.105 Sum_probs=95.8
Q ss_pred CCCceeEEEecC---CCCeEEEEecCCCCccchhhhhhhccccC---CCcceEEEECCCCCCCCCCCC-CCCCCHHHHHH
Q 012188 168 DCDCKFCTCWSS---SSRDTLFVKTQGPSAFWTETLFPNFSSAS---KSTYRLFAIDLLGFGRSPKPT-DSLYTVREHLD 240 (468)
Q Consensus 168 d~~~~~~~~~~~---~~p~vl~lHG~g~s~~~~~~~~~~L~~~~---~~gy~Via~D~~G~G~S~~~~-~~~~t~~~~~~ 240 (468)
+|..++|..+++ ++++|||+||++++...+..+++.|.+.. ..||+|+++|+||||.|+.+. ...++++++++
T Consensus 93 ~g~~i~~~~~~~~~~~~~pllllHG~~~s~~~~~~~~~~L~~~~~~~~~gf~vv~~DlpG~G~S~~~~~~~~~~~~~~a~ 172 (408)
T 3g02_A 93 EGLTIHFAALFSEREDAVPIALLHGWPGSFVEFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPPLDKDFGLMDNAR 172 (408)
T ss_dssp TTEEEEEEEECCSCTTCEEEEEECCSSCCGGGGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCSCSSSCCCHHHHHH
T ss_pred CCEEEEEEEecCCCCCCCeEEEECCCCCcHHHHHHHHHHHhcccccccCceEEEEECCCCCCCCCCCCCCCCCCHHHHHH
Confidence 666788877754 57899999999988776667888887321 148999999999999998876 45789999999
Q ss_pred HHHHHHhcccCCc-eEEEEEEcccHHHHHHHHHhCCCccceEEEe
Q 012188 241 MIEKSVIEPNKVK-SFHIVAHSLGCILALALAVKHPGSVKSLTLL 284 (468)
Q Consensus 241 di~~~l~~~l~~~-~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~ 284 (468)
++ ..++++++.+ +++++||||||.+++.+|.++|+.+..++.+
T Consensus 173 ~~-~~l~~~lg~~~~~~lvG~S~Gg~ia~~~A~~~p~~~~~~l~~ 216 (408)
T 3g02_A 173 VV-DQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNF 216 (408)
T ss_dssp HH-HHHHHHTTCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESC
T ss_pred HH-HHHHHHhCCCCCEEEeCCCchHHHHHHHHHhCCCceEEEEeC
Confidence 99 6999999997 9999999999999999999997744444443
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.1e-24 Score=202.49 Aligned_cols=217 Identities=21% Similarity=0.185 Sum_probs=154.9
Q ss_pred CCCceeEEEecC-CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 012188 168 DCDCKFCTCWSS-SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSV 246 (468)
Q Consensus 168 d~~~~~~~~~~~-~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l 246 (468)
++..+.+..+.+ ++|+||++||++++...+..+.+.|. +.||.|+++|+||+|.|..+.. .++..++++|+ ..+
T Consensus 14 ~g~~l~~~~~~p~~~p~vv~~HG~~~~~~~~~~~~~~l~---~~g~~v~~~d~~G~g~s~~~~~-~~~~~~~~~d~-~~~ 88 (290)
T 3ksr_A 14 GQDELSGTLLTPTGMPGVLFVHGWGGSQHHSLVRAREAV---GLGCICMTFDLRGHEGYASMRQ-SVTRAQNLDDI-KAA 88 (290)
T ss_dssp TTEEEEEEEEEEESEEEEEEECCTTCCTTTTHHHHHHHH---TTTCEEECCCCTTSGGGGGGTT-TCBHHHHHHHH-HHH
T ss_pred CCeEEEEEEecCCCCcEEEEeCCCCCCcCcHHHHHHHHH---HCCCEEEEeecCCCCCCCCCcc-cccHHHHHHHH-HHH
Confidence 445566666644 67899999999987776667778777 4699999999999999976543 46888888888 466
Q ss_pred hccc------CCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhh
Q 012188 247 IEPN------KVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASM 320 (468)
Q Consensus 247 ~~~l------~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (468)
++.+ +.++++++||||||.+++.++.++| ++++++++|................
T Consensus 89 i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~~~~~~~~~~~~~~~------------------ 148 (290)
T 3ksr_A 89 YDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP--VEWLALRSPALYKDAHWDQPKVSLN------------------ 148 (290)
T ss_dssp HHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC--CSEEEEESCCCCCSSCTTSBHHHHH------------------
T ss_pred HHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC--CCEEEEeCcchhhhhhhhccccccc------------------
Confidence 6554 2358999999999999999999998 8999999887654221100000000
Q ss_pred HHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcE
Q 012188 321 ACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDV 400 (468)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pv 400 (468)
.......+... ............+.++++|+
T Consensus 149 -----------------------------~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~P~ 179 (290)
T 3ksr_A 149 -----------------------------ADPDLMDYRRR--------------------ALAPGDNLALAACAQYKGDV 179 (290)
T ss_dssp -----------------------------HSTTHHHHTTS--------------------CCCGGGCHHHHHHHHCCSEE
T ss_pred -----------------------------CChhhhhhhhh--------------------hhhhccccHHHHHHhcCCCe
Confidence 00000000000 00000111222346779999
Q ss_pred EEEeeCCCCccChhhHHHHHHhCCCC---eEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 401 NVFHGEDDELIPVECSYNVQRKIPRA---RVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 401 Lii~G~~D~~vp~~~~~~l~~~~p~~---~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
++++|++|.++|.+.++.+.+.+++. ++++++++||..+..++++++.+.+.+||++.
T Consensus 180 lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 240 (290)
T 3ksr_A 180 LLVEAENDVIVPHPVMRNYADAFTNARSLTSRVIAGADHALSVKEHQQEYTRALIDWLTEM 240 (290)
T ss_dssp EEEEETTCSSSCHHHHHHHHHHTTTSSEEEEEEETTCCTTCCSHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCcccChHHHHHHHHHhccCCCceEEEcCCCCCCCCcchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998775 49999999998876468899999999999764
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=1e-23 Score=187.89 Aligned_cols=180 Identities=13% Similarity=0.140 Sum_probs=133.9
Q ss_pred CCCeEEEEecCCCC----ccchhhhhhhccccCCC-cceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCC-c
Q 012188 180 SSRDTLFVKTQGPS----AFWTETLFPNFSSASKS-TYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKV-K 253 (468)
Q Consensus 180 ~~p~vl~lHG~g~s----~~~~~~~~~~L~~~~~~-gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~-~ 253 (468)
++|+|||+||++++ ..|...+.+.|. +. ||+|+++|+||++. .+ ..+++ ..+++.++. +
T Consensus 3 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~l~---~~~g~~vi~~d~~g~~~--------~~---~~~~~-~~~~~~l~~~~ 67 (194)
T 2qs9_A 3 SPSKAVIVPGNGGGDVTTHGWYGWVKKELE---KIPGFQCLAKNMPDPIT--------AR---ESIWL-PFMETELHCDE 67 (194)
T ss_dssp CCCEEEEECCSSSSCTTTSTTHHHHHHHHT---TSTTCCEEECCCSSTTT--------CC---HHHHH-HHHHHTSCCCT
T ss_pred CCCEEEEECCCCCCCcccchHHHHHHHHHh---hccCceEEEeeCCCCCc--------cc---HHHHH-HHHHHHhCcCC
Confidence 46899999999887 336655677776 23 99999999999631 12 45555 577788887 8
Q ss_pred eEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHH
Q 012188 254 SFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICL 333 (468)
Q Consensus 254 ~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (468)
+++++||||||.+++.+|.++| ++++|+++++....... .. .
T Consensus 68 ~~~lvG~S~Gg~ia~~~a~~~p--v~~lvl~~~~~~~~~~~---~~----~----------------------------- 109 (194)
T 2qs9_A 68 KTIIIGHSSGAIAAMRYAETHR--VYAIVLVSAYTSDLGDE---NE----R----------------------------- 109 (194)
T ss_dssp TEEEEEETHHHHHHHHHHHHSC--CSEEEEESCCSSCTTCH---HH----H-----------------------------
T ss_pred CEEEEEcCcHHHHHHHHHHhCC--CCEEEEEcCCccccchh---hh----H-----------------------------
Confidence 9999999999999999999999 99999999875321100 00 0
Q ss_pred HhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccCh
Q 012188 334 LICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPV 413 (468)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~ 413 (468)
...+.... ... ..+..+.+|+++++|++|.++|+
T Consensus 110 -------------------------~~~~~~~~--------------------~~~-~~~~~~~~p~lii~G~~D~~vp~ 143 (194)
T 2qs9_A 110 -------------------------ASGYFTRP--------------------WQW-EKIKANCPYIVQFGSTDDPFLPW 143 (194)
T ss_dssp -------------------------HTSTTSSC--------------------CCH-HHHHHHCSEEEEEEETTCSSSCH
T ss_pred -------------------------HHhhhccc--------------------ccH-HHHHhhCCCEEEEEeCCCCcCCH
Confidence 00000000 000 01123468999999999999999
Q ss_pred hhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhcCCC
Q 012188 414 ECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSSSGH 461 (468)
Q Consensus 414 ~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~~~ 461 (468)
+.++.+.+.+ ++++++++++||+.+. ++|+.+++.+ +||++....
T Consensus 144 ~~~~~~~~~~-~~~~~~~~~~gH~~~~-~~p~~~~~~~-~fl~~~~~~ 188 (194)
T 2qs9_A 144 KEQQEVADRL-ETKLHKFTDCGHFQNT-EFHELITVVK-SLLKVPALE 188 (194)
T ss_dssp HHHHHHHHHH-TCEEEEESSCTTSCSS-CCHHHHHHHH-HHHTCCCCC
T ss_pred HHHHHHHHhc-CCeEEEeCCCCCccch-hCHHHHHHHH-HHHHhhhhh
Confidence 9999999988 9999999999999997 8999998876 899875443
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-23 Score=191.85 Aligned_cols=197 Identities=16% Similarity=0.088 Sum_probs=143.8
Q ss_pred cCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCC----------CHHHHHHHHHHHHh
Q 012188 178 SSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLY----------TVREHLDMIEKSVI 247 (468)
Q Consensus 178 ~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~----------t~~~~~~di~~~l~ 247 (468)
.+++|+||++||++++...+..+.+.|. ++||+|+++|+||+|.|..+..... ++++.++++ ..++
T Consensus 21 ~~~~~~vv~~hG~~~~~~~~~~~~~~l~---~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~~~ 96 (238)
T 1ufo_A 21 EAPKALLLALHGLQGSKEHILALLPGYA---ERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYRVALGFKEEA-RRVA 96 (238)
T ss_dssp SSCCEEEEEECCTTCCHHHHHHTSTTTG---GGTEEEEECCCTTSTTSSCCCCCTTSTTHHHHHHHHHHHHHHHH-HHHH
T ss_pred CCCccEEEEECCCcccchHHHHHHHHHH---hCCCEEEEecCCCCccCCCCCCcccccchhhhHHHHHHHHHHHH-HHHH
Confidence 3477899999999988776666666665 4689999999999999976543221 356667776 4555
Q ss_pred ccc---CCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHH
Q 012188 248 EPN---KVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWY 324 (468)
Q Consensus 248 ~~l---~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (468)
+.+ +.++++++|||+||.+++.++.++|+.+.++++++++......... ...+
T Consensus 97 ~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~------------ 152 (238)
T 1ufo_A 97 EEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKLPQGQ------------VVED------------ 152 (238)
T ss_dssp HHHHHHHCCCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCCCCTTC------------CCCC------------
T ss_pred HHHHhccCCcEEEEEEChHHHHHHHHHHhccCcceEEEEecCCccchhhhhh------------ccCC------------
Confidence 443 4489999999999999999999999999999998876543211100 0000
Q ss_pred HHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccC-CCcEEEE
Q 012188 325 EHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHV-KCDVNVF 403 (468)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~PvLii 403 (468)
+. ... . . .......+.++ ++|++++
T Consensus 153 ------------------~~---------~~~-~-~-------------------------~~~~~~~~~~~~~~P~l~i 178 (238)
T 1ufo_A 153 ------------------PG---------VLA-L-Y-------------------------QAPPATRGEAYGGVPLLHL 178 (238)
T ss_dssp ------------------HH---------HHH-H-H-------------------------HSCGGGCGGGGTTCCEEEE
T ss_pred ------------------cc---------cch-h-h-------------------------cCChhhhhhhccCCcEEEE
Confidence 00 000 0 0 00001112455 8999999
Q ss_pred eeCCCCccChhhHHHHHHhCC------CCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 404 HGEDDELIPVECSYNVQRKIP------RARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 404 ~G~~D~~vp~~~~~~l~~~~p------~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
+|++|.++|.+.++.+.+.++ ++++++++++||..+. +.++++.+.|.+|++.
T Consensus 179 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~-~~~~~~~~~l~~~l~~ 237 (238)
T 1ufo_A 179 HGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLTP-LMARVGLAFLEHWLEA 237 (238)
T ss_dssp EETTCTTTTHHHHHHHHHHHGGGCTTCCEEEEEETTCCSSCCH-HHHHHHHHHHHHHHHC
T ss_pred ECCCCCccCcHHHHHHHHHHhhcCCCCceEEEEeCCCCcccHH-HHHHHHHHHHHHHHhc
Confidence 999999999999999999888 8899999999999986 8888888888888854
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=6.1e-25 Score=207.53 Aligned_cols=224 Identities=12% Similarity=0.057 Sum_probs=145.9
Q ss_pred CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhccc-CCceEEEE
Q 012188 180 SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPN-KVKSFHIV 258 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l-~~~~i~lv 258 (468)
++|+|||+||++++...|..+.+.|. ++|+|+++|+||||.|..+. ..++++++++++ ..+++.+ +.++++|+
T Consensus 50 ~~~~lvllHG~~~~~~~~~~l~~~L~----~~~~v~~~D~~G~G~S~~~~-~~~~~~~~a~~~-~~~l~~~~~~~~~~lv 123 (280)
T 3qmv_A 50 APLRLVCFPYAGGTVSAFRGWQERLG----DEVAVVPVQLPGRGLRLRER-PYDTMEPLAEAV-ADALEEHRLTHDYALF 123 (280)
T ss_dssp CSEEEEEECCTTCCGGGGTTHHHHHC----TTEEEEECCCTTSGGGTTSC-CCCSHHHHHHHH-HHHHHHTTCSSSEEEE
T ss_pred CCceEEEECCCCCChHHHHHHHHhcC----CCceEEEEeCCCCCCCCCCC-CCCCHHHHHHHH-HHHHHHhCCCCCEEEE
Confidence 35789999999988777777888887 69999999999999997654 457999999999 6888888 77899999
Q ss_pred EEcccHHHHHHHHHhCCCccc----eEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHH
Q 012188 259 AHSLGCILALALAVKHPGSVK----SLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLL 334 (468)
Q Consensus 259 GhS~Gg~ial~~a~~~p~~v~----~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (468)
||||||.+|+.+|.++|+++. .+++.++.......... ... .....+...+.. .
T Consensus 124 G~S~Gg~va~~~a~~~p~~~~~~~~~l~l~~~~~p~~~~~~~--------------~~~----~~~~~~~~~~~~----~ 181 (280)
T 3qmv_A 124 GHSMGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRA--------------DHT----LSDTALREVIRD----L 181 (280)
T ss_dssp EETHHHHHHHHHHHHHHHTTCCCCSCEEEESCCCGGGCSCCC--------------GGG----SCHHHHHHHHHH----H
T ss_pred EeCHhHHHHHHHHHHHHHcCCCCceEEEEECCCCCCCcCccc--------------ccc----cCHHHHHHHHHH----h
Confidence 999999999999999998877 88887754322111000 000 000000000000 0
Q ss_pred hhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChh
Q 012188 335 ICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVE 414 (468)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~ 414 (468)
........ ... .+.... ...+......... +....+..+++|+++++|++|.++|.+
T Consensus 182 ~~~~~~~~-------~~~--------~~~~~~-~~~~~~~~~~~~~-------~~~~~~~~i~~P~l~i~G~~D~~~~~~ 238 (280)
T 3qmv_A 182 GGLDDADT-------LGA--------AYFDRR-LPVLRADLRACER-------YDWHPRPPLDCPTTAFSAAADPIATPE 238 (280)
T ss_dssp TCCC------------------------CCTT-HHHHHHHHHHHHT-------CCCCCCCCBCSCEEEEEEEECSSSCHH
T ss_pred CCCChhhh-------cCH--------HHHHHH-HHHHHHHHHHHHh-------ccccCCCceecCeEEEEecCCCCcChH
Confidence 00000000 000 000000 0000000000000 000113577999999999999999999
Q ss_pred hHHHHHHhCCCC-eEEEecCCCccccc-cCcHHHHHHHHHHHH
Q 012188 415 CSYNVQRKIPRA-RVKVIEKKDHITIV-VGRQKTFARELEEIW 455 (468)
Q Consensus 415 ~~~~l~~~~p~~-~l~~i~~~gH~~~~-~e~p~~~~~~i~~fl 455 (468)
..+.+.+.+++. ++++++ +||+.++ +++++++++.|.+||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~-ggH~~~~~~~~~~~~~~~i~~~L 280 (280)
T 3qmv_A 239 MVEAWRPYTTGSFLRRHLP-GNHFFLNGGPSRDRLLAHLGTEL 280 (280)
T ss_dssp HHHTTGGGBSSCEEEEEEE-EETTGGGSSHHHHHHHHHHHTTC
T ss_pred HHHHHHHhcCCceEEEEec-CCCeEEcCchhHHHHHHHHHhhC
Confidence 999999988875 777777 4999886 368999999998875
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.91 E-value=4.4e-23 Score=185.65 Aligned_cols=183 Identities=15% Similarity=0.129 Sum_probs=139.5
Q ss_pred CCCceeEEEecC----CCCeEEEEecC-----CCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCC-CCCCHHH
Q 012188 168 DCDCKFCTCWSS----SSRDTLFVKTQ-----GPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD-SLYTVRE 237 (468)
Q Consensus 168 d~~~~~~~~~~~----~~p~vl~lHG~-----g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~-~~~t~~~ 237 (468)
|+ .+.+..+.+ ++|+||++||+ .....++..+.+.|. ++||+|+++|+||+|.|..+.. .....++
T Consensus 15 ~g-~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~---~~g~~v~~~d~~g~g~s~~~~~~~~~~~~d 90 (208)
T 3trd_A 15 VG-QLEVMITRPKGIEKSVTGIICHPHPLHGGTMNNKVVTTLAKALD---ELGLKTVRFNFRGVGKSQGRYDNGVGEVED 90 (208)
T ss_dssp SS-EEEEEEECCSSCCCSEEEEEECSCGGGTCCTTCHHHHHHHHHHH---HTTCEEEEECCTTSTTCCSCCCTTTHHHHH
T ss_pred Cc-eEEEEEEcCCCCCCCCEEEEEcCCCCCCCccCCchHHHHHHHHH---HCCCEEEEEecCCCCCCCCCccchHHHHHH
Confidence 45 566666632 46799999994 223333445666665 4799999999999999987633 2223444
Q ss_pred HHHHHHHHHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhh
Q 012188 238 HLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFG 317 (468)
Q Consensus 238 ~~~di~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (468)
..+.+ +.+.+.++.++++++||||||.+++.++ .+| +++++|+++|+.....
T Consensus 91 ~~~~~-~~l~~~~~~~~i~l~G~S~Gg~~a~~~a-~~~-~v~~~v~~~~~~~~~~------------------------- 142 (208)
T 3trd_A 91 LKAVL-RWVEHHWSQDDIWLAGFSFGAYISAKVA-YDQ-KVAQLISVAPPVFYEG------------------------- 142 (208)
T ss_dssp HHHHH-HHHHHHCTTCEEEEEEETHHHHHHHHHH-HHS-CCSEEEEESCCTTSGG-------------------------
T ss_pred HHHHH-HHHHHhCCCCeEEEEEeCHHHHHHHHHh-ccC-CccEEEEeccccccCC-------------------------
Confidence 44455 5666667778999999999999999999 777 8999999998751100
Q ss_pred hhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCC
Q 012188 318 ASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVK 397 (468)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 397 (468)
...+..++
T Consensus 143 ------------------------------------------------------------------------~~~~~~~~ 150 (208)
T 3trd_A 143 ------------------------------------------------------------------------FASLTQMA 150 (208)
T ss_dssp ------------------------------------------------------------------------GTTCCSCC
T ss_pred ------------------------------------------------------------------------chhhhhcC
Confidence 00013458
Q ss_pred CcEEEEeeCCCCccChhhHHHHHHhCCC-CeEEEecCCCccccccCcHHHHHHHHHHHHh
Q 012188 398 CDVNVFHGEDDELIPVECSYNVQRKIPR-ARVKVIEKKDHITIVVGRQKTFARELEEIWR 456 (468)
Q Consensus 398 ~PvLii~G~~D~~vp~~~~~~l~~~~p~-~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~ 456 (468)
+|+++++|++|.++|++.++.+.+.+++ +++++++++||+... + .+++.+.|.+||+
T Consensus 151 ~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~-~-~~~~~~~i~~fl~ 208 (208)
T 3trd_A 151 SPWLIVQGDQDEVVPFEQVKAFVNQISSPVEFVVMSGASHFFHG-R-LIELRELLVRNLA 208 (208)
T ss_dssp SCEEEEEETTCSSSCHHHHHHHHHHSSSCCEEEEETTCCSSCTT-C-HHHHHHHHHHHHC
T ss_pred CCEEEEECCCCCCCCHHHHHHHHHHccCceEEEEeCCCCCcccc-c-HHHHHHHHHHHhC
Confidence 9999999999999999999999999987 899999999999885 4 4899999999983
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.8e-22 Score=188.29 Aligned_cols=249 Identities=11% Similarity=0.081 Sum_probs=150.2
Q ss_pred CCCCceeEEEecC----CCCeEEEEecCC---CCcc-chhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHH
Q 012188 167 SDCDCKFCTCWSS----SSRDTLFVKTQG---PSAF-WTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREH 238 (468)
Q Consensus 167 ~d~~~~~~~~~~~----~~p~vl~lHG~g---~s~~-~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~ 238 (468)
.||..+.++.|.+ ++|+|||+||++ ++.. |...+.+.+. ++|+|+++|+||+|.+..+ ...++.
T Consensus 11 ~dg~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~l~----~~~~v~~~d~~~~~~~~~~----~~~~d~ 82 (275)
T 3h04_A 11 KDAFALPYTIIKAKNQPTKGVIVYIHGGGLMFGKANDLSPQYIDILT----EHYDLIQLSYRLLPEVSLD----CIIEDV 82 (275)
T ss_dssp TTSCEEEEEEECCSSSSCSEEEEEECCSTTTSCCTTCSCHHHHHHHT----TTEEEEEECCCCTTTSCHH----HHHHHH
T ss_pred CCcEEEEEEEEccCCCCCCCEEEEEECCcccCCchhhhHHHHHHHHH----hCceEEeeccccCCccccc----hhHHHH
Confidence 3666777777732 467899999987 4443 4445677776 5599999999999877432 245566
Q ss_pred HHHHHHHHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhh
Q 012188 239 LDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGA 318 (468)
Q Consensus 239 ~~di~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (468)
.+.+ ..+.+.++.++++|+||||||.+++.+|.+ ++++++|+++|..................... .
T Consensus 83 ~~~~-~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~--~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~--------- 149 (275)
T 3h04_A 83 YASF-DAIQSQYSNCPIFTFGRSSGAYLSLLIARD--RDIDGVIDFYGYSRINTEPFKTTNSYYAKIAQ-S--------- 149 (275)
T ss_dssp HHHH-HHHHHTTTTSCEEEEEETHHHHHHHHHHHH--SCCSEEEEESCCSCSCSHHHHSCCHHHHHHHT-T---------
T ss_pred HHHH-HHHHhhCCCCCEEEEEecHHHHHHHHHhcc--CCccEEEeccccccccccccccccchhhcccc-c---------
Confidence 6666 577778888899999999999999999999 78999999998765421110000000000000 0
Q ss_pred hhHHHHHHHhhHHHHHhhccchhHHH--HHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccC
Q 012188 319 SMACWYEHISRTICLLICKNHRVWEF--LAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHV 396 (468)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 396 (468)
........+.... ........... .............+... . ..+ .. .......+.++
T Consensus 150 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~-----------~~-~~~~~~~~~~~ 209 (275)
T 3h04_A 150 INETMIAQLTSPT--PVVQDQIAQRFLIYVYARGTGKWINMINIA----D--YTD-----------SK-YNIAPDELKTL 209 (275)
T ss_dssp SCHHHHHTTSCSS--CCSSCSSGGGHHHHHHHHHHTCHHHHHCCS----C--TTS-----------GG-GSCCHHHHTTC
T ss_pred chHHHHhcccCCC--CcCCCccccchhhhhhhhhcCchHHhhccc----c--ccc-----------cc-cccccchhccC
Confidence 0000000000000 00000000000 00000000000000000 0 000 00 00111223566
Q ss_pred CCcEEEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcH---HHHHHHHHHHHhhc
Q 012188 397 KCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQ---KTFARELEEIWRSS 458 (468)
Q Consensus 397 ~~PvLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p---~~~~~~i~~fl~~~ 458 (468)
+ |+|+++|++|.++|++.++.+.+.++++++++++++||..+. +.+ +++.+.+.+||++.
T Consensus 210 ~-P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~-~~~~~~~~~~~~i~~fl~~~ 272 (275)
T 3h04_A 210 P-PVFIAHCNGDYDVPVEESEHIMNHVPHSTFERVNKNEHDFDR-RPNDEAITIYRKVVDFLNAI 272 (275)
T ss_dssp C-CEEEEEETTCSSSCTHHHHHHHTTCSSEEEEEECSSCSCTTS-SCCHHHHHHHHHHHHHHHHH
T ss_pred C-CEEEEecCCCCCCChHHHHHHHHhcCCceEEEeCCCCCCccc-CCchhHHHHHHHHHHHHHHH
Confidence 7 999999999999999999999999999999999999999887 666 69999999999763
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2e-23 Score=183.87 Aligned_cols=171 Identities=16% Similarity=0.158 Sum_probs=137.2
Q ss_pred CCCeEEEEecCCCCccchhhhhhhccccCCCcc---eEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceEE
Q 012188 180 SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTY---RLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFH 256 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy---~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i~ 256 (468)
++|+|||+||++++...+..+.+.|. +.|| +|+++|+||+|.|.. ++.+++++++ ..++++++.++++
T Consensus 2 ~~~~vv~~HG~~~~~~~~~~~~~~l~---~~G~~~~~v~~~d~~g~g~s~~-----~~~~~~~~~~-~~~~~~~~~~~~~ 72 (181)
T 1isp_A 2 EHNPVVMVHGIGGASFNFAGIKSYLV---SQGWSRDKLYAVDFWDKTGTNY-----NNGPVLSRFV-QKVLDETGAKKVD 72 (181)
T ss_dssp CCCCEEEECCTTCCGGGGHHHHHHHH---HTTCCGGGEEECCCSCTTCCHH-----HHHHHHHHHH-HHHHHHHCCSCEE
T ss_pred CCCeEEEECCcCCCHhHHHHHHHHHH---HcCCCCccEEEEecCCCCCchh-----hhHHHHHHHH-HHHHHHcCCCeEE
Confidence 46899999999887776666777776 4677 799999999998853 4678888888 6888999989999
Q ss_pred EEEEcccHHHHHHHHHhC--CCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHH
Q 012188 257 IVAHSLGCILALALAVKH--PGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLL 334 (468)
Q Consensus 257 lvGhS~Gg~ial~~a~~~--p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (468)
++||||||.+++.++.++ |++++++|+++++.......
T Consensus 73 lvG~S~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~~~---------------------------------------- 112 (181)
T 1isp_A 73 IVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTGK---------------------------------------- 112 (181)
T ss_dssp EEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCSB----------------------------------------
T ss_pred EEEECccHHHHHHHHHhcCCCceEEEEEEEcCcccccccc----------------------------------------
Confidence 999999999999999998 89999999999874220000
Q ss_pred hhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChh
Q 012188 335 ICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVE 414 (468)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~ 414 (468)
.+ . + .. ...++|+++++|++|.++|++
T Consensus 113 --------------------------~~-~---------------~----~~-------~~~~~p~l~i~G~~D~~v~~~ 139 (181)
T 1isp_A 113 --------------------------AL-P---------------G----TD-------PNQKILYTSIYSSADMIVMNY 139 (181)
T ss_dssp --------------------------CC-C---------------C----SC-------TTCCCEEEEEEETTCSSSCHH
T ss_pred --------------------------cC-C---------------C----CC-------CccCCcEEEEecCCCcccccc
Confidence 00 0 0 00 122689999999999999988
Q ss_pred hHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhcC
Q 012188 415 CSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSSS 459 (468)
Q Consensus 415 ~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~ 459 (468)
.+ .++++++++++++||+.+. ++| ++.+.|.+||++..
T Consensus 140 ~~-----~~~~~~~~~~~~~gH~~~~-~~~-~~~~~i~~fl~~~~ 177 (181)
T 1isp_A 140 LS-----RLDGARNVQIHGVGHIGLL-YSS-QVNSLIKEGLNGGG 177 (181)
T ss_dssp HH-----CCBTSEEEEESSCCTGGGG-GCH-HHHHHHHHHHTTTC
T ss_pred cc-----cCCCCcceeeccCchHhhc-cCH-HHHHHHHHHHhccC
Confidence 43 4789999999999999997 676 79999999997753
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.90 E-value=5e-23 Score=180.04 Aligned_cols=172 Identities=17% Similarity=0.188 Sum_probs=136.5
Q ss_pred CCCCeEEEEecCCCCccc--hhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceEE
Q 012188 179 SSSRDTLFVKTQGPSAFW--TETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFH 256 (468)
Q Consensus 179 ~~~p~vl~lHG~g~s~~~--~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i~ 256 (468)
.++|+||++||++++... ...+.+.|. +.||+|+++|+||+|.|+... ...+..+.++++...+.+..+.++++
T Consensus 2 ~~~~~vv~~HG~~~~~~~~~~~~~~~~l~---~~g~~v~~~d~~g~g~s~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (176)
T 2qjw_A 2 MSRGHCILAHGFESGPDALKVTALAEVAE---RLGWTHERPDFTDLDARRDLG-QLGDVRGRLQRLLEIARAATEKGPVV 77 (176)
T ss_dssp CSSCEEEEECCTTCCTTSHHHHHHHHHHH---HTTCEEECCCCHHHHTCGGGC-TTCCHHHHHHHHHHHHHHHHTTSCEE
T ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHH---HCCCEEEEeCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHhcCCCCCEE
Confidence 356889999999876542 224666665 479999999999999997543 34577888877743333333457999
Q ss_pred EEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHHhh
Q 012188 257 IVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLIC 336 (468)
Q Consensus 257 lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (468)
++||||||.+++.++.++| ++++|+++|+....... .
T Consensus 78 l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~~~~------------------~----------------------- 114 (176)
T 2qjw_A 78 LAGSSLGSYIAAQVSLQVP--TRALFLMVPPTKMGPLP------------------A----------------------- 114 (176)
T ss_dssp EEEETHHHHHHHHHHTTSC--CSEEEEESCCSCBTTBC------------------C-----------------------
T ss_pred EEEECHHHHHHHHHHHhcC--hhheEEECCcCCccccC------------------c-----------------------
Confidence 9999999999999999999 99999999875331000 0
Q ss_pred ccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChhhH
Q 012188 337 KNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECS 416 (468)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~ 416 (468)
...+++|+++++|++|.++|.+.+
T Consensus 115 --------------------------------------------------------~~~~~~P~l~i~g~~D~~~~~~~~ 138 (176)
T 2qjw_A 115 --------------------------------------------------------LDAAAVPISIVHAWHDELIPAADV 138 (176)
T ss_dssp --------------------------------------------------------CCCCSSCEEEEEETTCSSSCHHHH
T ss_pred --------------------------------------------------------ccccCCCEEEEEcCCCCccCHHHH
Confidence 245689999999999999999999
Q ss_pred HHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 417 YNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 417 ~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
+.+.+.+ +++++++ ++||... ++++++.+.+.+|+++
T Consensus 139 ~~~~~~~-~~~~~~~-~~~H~~~--~~~~~~~~~i~~fl~~ 175 (176)
T 2qjw_A 139 IAWAQAR-SARLLLV-DDGHRLG--AHVQAASRAFAELLQS 175 (176)
T ss_dssp HHHHHHH-TCEEEEE-SSCTTCT--TCHHHHHHHHHHHHHT
T ss_pred HHHHHhC-CceEEEe-CCCcccc--ccHHHHHHHHHHHHHh
Confidence 9998887 7899999 8999973 8999999999999975
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-22 Score=180.60 Aligned_cols=180 Identities=14% Similarity=0.148 Sum_probs=134.5
Q ss_pred CCeEEEEecCCCCcc--chhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceEEEE
Q 012188 181 SRDTLFVKTQGPSAF--WTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIV 258 (468)
Q Consensus 181 ~p~vl~lHG~g~s~~--~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i~lv 258 (468)
.|+|||+||++++.. |...+...|. ++||+|+++|+| .|+. .+++++++++ ..+++.+ .++++++
T Consensus 4 ~p~vv~~HG~~~~~~~~~~~~~~~~l~---~~g~~v~~~d~~---~~~~-----~~~~~~~~~~-~~~~~~~-~~~~~l~ 70 (192)
T 1uxo_A 4 TKQVYIIHGYRASSTNHWFPWLKKRLL---ADGVQADILNMP---NPLQ-----PRLEDWLDTL-SLYQHTL-HENTYLV 70 (192)
T ss_dssp CCEEEEECCTTCCTTSTTHHHHHHHHH---HTTCEEEEECCS---CTTS-----CCHHHHHHHH-HTTGGGC-CTTEEEE
T ss_pred CCEEEEEcCCCCCcchhHHHHHHHHHH---hCCcEEEEecCC---CCCC-----CCHHHHHHHH-HHHHHhc-cCCEEEE
Confidence 456999999988765 5543334563 389999999999 2322 2789999999 6888888 7899999
Q ss_pred EEcccHHHHHHHHHhCCC--ccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHHhh
Q 012188 259 AHSLGCILALALAVKHPG--SVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLIC 336 (468)
Q Consensus 259 GhS~Gg~ial~~a~~~p~--~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (468)
||||||.+++.++.++|+ +++++|+++|+....... +..
T Consensus 71 G~S~Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~~~~~~-----------------~~~---------------------- 111 (192)
T 1uxo_A 71 AHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPTL-----------------QML---------------------- 111 (192)
T ss_dssp EETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTTC-----------------GGG----------------------
T ss_pred EeCccHHHHHHHHHHhcccCCccEEEEeccCCCccccc-----------------hhh----------------------
Confidence 999999999999999999 999999999865431100 000
Q ss_pred ccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChhhH
Q 012188 337 KNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECS 416 (468)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~ 416 (468)
..+... .... ..+.++++|+++++|++|.++|.+.+
T Consensus 112 -----------------------~~~~~~--------------------~~~~-~~~~~~~~P~l~i~g~~D~~~~~~~~ 147 (192)
T 1uxo_A 112 -----------------------DEFTQG--------------------SFDH-QKIIESAKHRAVIASKDDQIVPFSFS 147 (192)
T ss_dssp -----------------------GGGTCS--------------------CCCH-HHHHHHEEEEEEEEETTCSSSCHHHH
T ss_pred -----------------------hhhhhc--------------------CCCH-HHHHhhcCCEEEEecCCCCcCCHHHH
Confidence 000000 0001 11245578999999999999999999
Q ss_pred HHHHHhCCCCeEEEecCCCccccccCcH---HHHHHHHHHHHhhc
Q 012188 417 YNVQRKIPRARVKVIEKKDHITIVVGRQ---KTFARELEEIWRSS 458 (468)
Q Consensus 417 ~~l~~~~p~~~l~~i~~~gH~~~~~e~p---~~~~~~i~~fl~~~ 458 (468)
+.+.+.+ ++++++++++||+.+. +++ .++.+.+.+|+++.
T Consensus 148 ~~~~~~~-~~~~~~~~~~gH~~~~-~~~~~~~~~~~~l~~~l~~~ 190 (192)
T 1uxo_A 148 KDLAQQI-DAALYEVQHGGHFLED-EGFTSLPIVYDVLTSYFSKE 190 (192)
T ss_dssp HHHHHHT-TCEEEEETTCTTSCGG-GTCSCCHHHHHHHHHHHHC-
T ss_pred HHHHHhc-CceEEEeCCCcCcccc-cccccHHHHHHHHHHHHHHh
Confidence 9999999 9999999999999986 665 34578888888653
|
| >2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-22 Score=197.27 Aligned_cols=110 Identities=16% Similarity=0.210 Sum_probs=80.6
Q ss_pred CceeEEEec---CCCCeEEEEecCCCCccc---hhhhhhhccccCCCcceEEEEC----CCCCCCCCCCCCCCCCHHHHH
Q 012188 170 DCKFCTCWS---SSSRDTLFVKTQGPSAFW---TETLFPNFSSASKSTYRLFAID----LLGFGRSPKPTDSLYTVREHL 239 (468)
Q Consensus 170 ~~~~~~~~~---~~~p~vl~lHG~g~s~~~---~~~~~~~L~~~~~~gy~Via~D----~~G~G~S~~~~~~~~t~~~~~ 239 (468)
..++|..++ +++|+|||+||++.+..+ +..+.+.|. .||+|+++| +||||.|+.+. ...++.
T Consensus 24 ~~~~y~~~g~~~~~~~~vvllHG~~~~~~~~~~~~~l~~~L~----~g~~Vi~~Dl~~D~~G~G~S~~~~----~~~d~~ 95 (335)
T 2q0x_A 24 PYCKIPVFMMNMDARRCVLWVGGQTESLLSFDYFTNLAEELQ----GDWAFVQVEVPSGKIGSGPQDHAH----DAEDVD 95 (335)
T ss_dssp TTEEEEEEEECTTSSSEEEEECCTTCCTTCSTTHHHHHHHHT----TTCEEEEECCGGGBTTSCSCCHHH----HHHHHH
T ss_pred CceeEEEeccCCCCCcEEEEECCCCccccchhHHHHHHHHHH----CCcEEEEEeccCCCCCCCCccccC----cHHHHH
Confidence 345555565 245899999998875442 344666665 899999995 59999985321 223333
Q ss_pred HHHHHHHhcccCCceEEEEEEcccHHHHHHHHH--hCCCccceEEEecCCC
Q 012188 240 DMIEKSVIEPNKVKSFHIVAHSLGCILALALAV--KHPGSVKSLTLLAPPY 288 (468)
Q Consensus 240 ~di~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~--~~p~~v~~lVl~~p~~ 288 (468)
+.+ ..+.+.++.++++|+||||||.+|+.+|. .+|++|+++|+++|..
T Consensus 96 ~~~-~~l~~~l~~~~~~LvGhSmGG~iAl~~A~~~~~p~rV~~lVL~~~~~ 145 (335)
T 2q0x_A 96 DLI-GILLRDHCMNEVALFATSTGTQLVFELLENSAHKSSITRVILHGVVC 145 (335)
T ss_dssp HHH-HHHHHHSCCCCEEEEEEGGGHHHHHHHHHHCTTGGGEEEEEEEEECC
T ss_pred HHH-HHHHHHcCCCcEEEEEECHhHHHHHHHHHhccchhceeEEEEECCcc
Confidence 333 34555588899999999999999999999 5799999999999764
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.89 E-value=3.8e-22 Score=185.03 Aligned_cols=182 Identities=15% Similarity=0.168 Sum_probs=137.3
Q ss_pred ceeEEEec---CCCCeEEEEecCCCCc-----cchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHH
Q 012188 171 CKFCTCWS---SSSRDTLFVKTQGPSA-----FWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMI 242 (468)
Q Consensus 171 ~~~~~~~~---~~~p~vl~lHG~g~s~-----~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di 242 (468)
.+.++.+. ++.|+||++||+++.. ..+..+.+.|. ++||.|+++|+||+|.|+.+.. .+..++ +|+
T Consensus 34 ~l~~~~~~p~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~---~~G~~v~~~d~~g~G~s~~~~~--~~~~~~-~d~ 107 (249)
T 2i3d_A 34 RLEGRYQPSKEKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQ---KRGFTTLRFNFRSIGRSQGEFD--HGAGEL-SDA 107 (249)
T ss_dssp EEEEEEECCSSTTCCEEEEECCCGGGTCCTTSHHHHHHHHHHH---HTTCEEEEECCTTSTTCCSCCC--SSHHHH-HHH
T ss_pred eEEEEEEcCCCCCCCEEEEECCCcccCCCccchHHHHHHHHHH---HCCCEEEEECCCCCCCCCCCCC--CccchH-HHH
Confidence 56555553 3467899999974321 12234556665 4799999999999999976653 234333 444
Q ss_pred HHHHhccc-----CCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhh
Q 012188 243 EKSVIEPN-----KVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFG 317 (468)
Q Consensus 243 ~~~l~~~l-----~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (468)
..+++.+ ..++++++||||||.+++.++.++|+ ++++|+++|+.....
T Consensus 108 -~~~i~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~------------------------- 160 (249)
T 2i3d_A 108 -ASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTYD------------------------- 160 (249)
T ss_dssp -HHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTSC-------------------------
T ss_pred -HHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcCCC-ccEEEEEcCchhhhh-------------------------
Confidence 2333322 22479999999999999999999998 999999998753200
Q ss_pred hhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCC
Q 012188 318 ASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVK 397 (468)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 397 (468)
...+.+++
T Consensus 161 ------------------------------------------------------------------------~~~~~~~~ 168 (249)
T 2i3d_A 161 ------------------------------------------------------------------------FSFLAPCP 168 (249)
T ss_dssp ------------------------------------------------------------------------CTTCTTCC
T ss_pred ------------------------------------------------------------------------hhhhcccC
Confidence 00024568
Q ss_pred CcEEEEeeCCCCccChhhHHHHHHhCC-----CCeEEEecCCCccccccCcHHHHHHHHHHHHhhcC
Q 012188 398 CDVNVFHGEDDELIPVECSYNVQRKIP-----RARVKVIEKKDHITIVVGRQKTFARELEEIWRSSS 459 (468)
Q Consensus 398 ~PvLii~G~~D~~vp~~~~~~l~~~~p-----~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~ 459 (468)
+|+++++|++|.++|.+.++.+.+.++ ++++++++++||... ++++++.+.+.+||++..
T Consensus 169 ~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~i~~fl~~~l 233 (249)
T 2i3d_A 169 SSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTLPGANHFFN--GKVDELMGECEDYLDRRL 233 (249)
T ss_dssp SCEEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTTCT--TCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCCCHHHHHHHHHHHhhccCCceeEEEECCCCcccc--cCHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999887 779999999999976 689999999999998753
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 | Back alignment and structure |
|---|
Probab=99.89 E-value=7.4e-23 Score=191.30 Aligned_cols=182 Identities=14% Similarity=0.093 Sum_probs=139.3
Q ss_pred CCceeEEEec--CCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH-
Q 012188 169 CDCKFCTCWS--SSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKS- 245 (468)
Q Consensus 169 ~~~~~~~~~~--~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~- 245 (468)
+..+++..+. +++|+|||+||++++...+..+...|. ++||.|+++|+||+|.+.... ..++.+.++.+ ..
T Consensus 40 ~~~l~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~---~~G~~v~~~d~~g~g~~~~~~--~~d~~~~~~~l-~~~ 113 (262)
T 1jfr_A 40 GGTIYYPTSTADGTFGAVVISPGFTAYQSSIAWLGPRLA---SQGFVVFTIDTNTTLDQPDSR--GRQLLSALDYL-TQR 113 (262)
T ss_dssp CEEEEEESCCTTCCEEEEEEECCTTCCGGGTTTHHHHHH---TTTCEEEEECCSSTTCCHHHH--HHHHHHHHHHH-HHT
T ss_pred ceeEEecCCCCCCCCCEEEEeCCcCCCchhHHHHHHHHH---hCCCEEEEeCCCCCCCCCchh--HHHHHHHHHHH-Hhc
Confidence 3345454442 345789999999987776666777775 579999999999999774211 11222333333 12
Q ss_pred --HhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHH
Q 012188 246 --VIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACW 323 (468)
Q Consensus 246 --l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (468)
++..++.++++++||||||.+++.++.++|+ ++++|+++|....
T Consensus 114 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~p~~~~--------------------------------- 159 (262)
T 1jfr_A 114 SSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS-LKAAIPLTGWNTD--------------------------------- 159 (262)
T ss_dssp STTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCSC---------------------------------
T ss_pred cccccccCcccEEEEEEChhHHHHHHHHhcCcc-ceEEEeecccCcc---------------------------------
Confidence 2345666899999999999999999999998 9999999875310
Q ss_pred HHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEE
Q 012188 324 YEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVF 403 (468)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii 403 (468)
..+.++++|++++
T Consensus 160 -------------------------------------------------------------------~~~~~~~~P~l~i 172 (262)
T 1jfr_A 160 -------------------------------------------------------------------KTWPELRTPTLVV 172 (262)
T ss_dssp -------------------------------------------------------------------CCCTTCCSCEEEE
T ss_pred -------------------------------------------------------------------ccccccCCCEEEE
Confidence 0014568999999
Q ss_pred eeCCCCccChhh-HHHHHHhCCC---CeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 404 HGEDDELIPVEC-SYNVQRKIPR---ARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 404 ~G~~D~~vp~~~-~~~l~~~~p~---~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
+|++|.++|.+. ++.+.+.+++ .++++++++||..+. ++++++.+.+.+||++.
T Consensus 173 ~G~~D~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~H~~~~-~~~~~~~~~i~~fl~~~ 230 (262)
T 1jfr_A 173 GADGDTVAPVATHSKPFYESLPGSLDKAYLELRGASHFTPN-TSDTTIAKYSISWLKRF 230 (262)
T ss_dssp EETTCSSSCTTTTHHHHHHHSCTTSCEEEEEETTCCTTGGG-SCCHHHHHHHHHHHHHH
T ss_pred ecCccccCCchhhHHHHHHHhhcCCCceEEEeCCCCcCCcc-cchHHHHHHHHHHHHHH
Confidence 999999999998 9999999875 389999999999997 88899999999999864
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.1e-23 Score=203.72 Aligned_cols=113 Identities=16% Similarity=0.144 Sum_probs=89.4
Q ss_pred eeEEEe-cCCCCeEEEEecCCCCccchh----------------hhhhhccccCCCcceEEEECCCCCCCCCCCCCC---
Q 012188 172 KFCTCW-SSSSRDTLFVKTQGPSAFWTE----------------TLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDS--- 231 (468)
Q Consensus 172 ~~~~~~-~~~~p~vl~lHG~g~s~~~~~----------------~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~--- 231 (468)
+.+..+ .+++|+||++||++++...+. .+.+.|. ++||+|+++|+||||.|+.+...
T Consensus 40 ~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~---~~g~~v~~~d~~G~G~s~~~~~~~~~ 116 (354)
T 2rau_A 40 LHKVNLIGGGNDAVLILPGTWSSGEQLVTISWNGVHYTIPDYRKSIVLYLA---RNGFNVYTIDYRTHYVPPFLKDRQLS 116 (354)
T ss_dssp EEEEEETTCCEEEEEEECCTTCCHHHHHHSEETTEECSCCCGGGCHHHHHH---HTTEEEEEEECGGGGCCTTCCGGGGG
T ss_pred EEeecccCCCCCEEEEECCCCCCccccccccccccccccccchhhHHHHHH---hCCCEEEEecCCCCCCCCcccccccc
Confidence 444444 456789999999988764222 4566665 46899999999999999865531
Q ss_pred ---CCCHHHHHHHHHHHHhcc----cCCceEEEEEEcccHHHHHHHHHhC-CCccceEEEecCCC
Q 012188 232 ---LYTVREHLDMIEKSVIEP----NKVKSFHIVAHSLGCILALALAVKH-PGSVKSLTLLAPPY 288 (468)
Q Consensus 232 ---~~t~~~~~~di~~~l~~~----l~~~~i~lvGhS~Gg~ial~~a~~~-p~~v~~lVl~~p~~ 288 (468)
.++++++++|+ ..+++. ++.++++++||||||.+++.+|.++ |++|+++|++++..
T Consensus 117 ~~~~~~~~~~~~d~-~~~~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~p~~v~~lvl~~~~~ 180 (354)
T 2rau_A 117 FTANWGWSTWISDI-KEVVSFIKRDSGQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDGGP 180 (354)
T ss_dssp GGTTCSHHHHHHHH-HHHHHHHHHHHCCSSEEEEEETHHHHHHHHHHHHHHHHHEEEEEEESCSC
T ss_pred cccCCcHHHHHHHH-HHHHHHHHHhcCCceEEEEEECHhHHHHHHHHHhcCccccceEEEecccc
Confidence 57889998888 466665 5788999999999999999999999 99999999997543
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=99.89 E-value=2e-23 Score=189.36 Aligned_cols=189 Identities=14% Similarity=0.049 Sum_probs=144.2
Q ss_pred CCCceeEEEecC--CCCeEEEEecCCCCccc--hhhhhhhccccCCCcceEEEECCCCCCCCCCCCC---CCCCHHHHHH
Q 012188 168 DCDCKFCTCWSS--SSRDTLFVKTQGPSAFW--TETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD---SLYTVREHLD 240 (468)
Q Consensus 168 d~~~~~~~~~~~--~~p~vl~lHG~g~s~~~--~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~---~~~t~~~~~~ 240 (468)
++..+.+..+.+ ++|+||++||++++... +..+.+.|. ++||.|+++|+||+|.|..... ..++++++++
T Consensus 20 ~g~~l~~~~~~p~~~~p~vv~~hG~~~~~~~~~~~~~~~~l~---~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~ 96 (223)
T 2o2g_A 20 GEVKLKGNLVIPNGATGIVLFAHGSGSSRYSPRNRYVAEVLQ---QAGLATLLIDLLTQEEEEIDLRTRHLRFDIGLLAS 96 (223)
T ss_dssp TTEEEEEEEECCTTCCEEEEEECCTTCCTTCHHHHHHHHHHH---HHTCEEEEECSSCHHHHHHHHHHCSSTTCHHHHHH
T ss_pred CCeEEEEEEecCCCCceEEEEecCCCCCCCccchHHHHHHHH---HCCCEEEEEcCCCcCCCCccchhhcccCcHHHHHH
Confidence 455566666643 46899999999876652 334566665 4689999999999999854321 2368888888
Q ss_pred HHHHHHhcccC------CceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchh
Q 012188 241 MIEKSVIEPNK------VKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLI 314 (468)
Q Consensus 241 di~~~l~~~l~------~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (468)
++ ..+++.+. .++++++|||+||.+++.++.++|++++++|++++.....
T Consensus 97 d~-~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~----------------------- 152 (223)
T 2o2g_A 97 RL-VGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRPDLA----------------------- 152 (223)
T ss_dssp HH-HHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCGGGC-----------------------
T ss_pred HH-HHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCceEEEEEeCCCCCcC-----------------------
Confidence 88 46655443 2399999999999999999999999999999998742100
Q ss_pred hhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhc
Q 012188 315 AFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRN 394 (468)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (468)
...+.
T Consensus 153 ---------------------------------------------------------------------------~~~~~ 157 (223)
T 2o2g_A 153 ---------------------------------------------------------------------------PSALP 157 (223)
T ss_dssp ---------------------------------------------------------------------------TTTGG
T ss_pred ---------------------------------------------------------------------------HHHHh
Confidence 00124
Q ss_pred cCCCcEEEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 395 HVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 395 ~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
++++|+++++|++|.++|.+..+.+.+..++.++++++++||.....+.++++.+.+.+||++.
T Consensus 158 ~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 221 (223)
T 2o2g_A 158 HVKAPTLLIVGGYDLPVIAMNEDALEQLQTSKRLVIIPRASHLFEEPGALTAVAQLASEWFMHY 221 (223)
T ss_dssp GCCSCEEEEEETTCHHHHHHHHHHHHHCCSSEEEEEETTCCTTCCSTTHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEEccccCCCCHHHHHHHHhhCCCeEEEEeCCCCcccCChHHHHHHHHHHHHHHHHh
Confidence 6689999999999999987776666666688999999999999765456799999999999864
|
| >1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.8e-22 Score=195.41 Aligned_cols=188 Identities=14% Similarity=0.171 Sum_probs=142.1
Q ss_pred CCceeEEEec---CCCCeEEEEecCCCCccchh-------hhhhhccccCCCcceEEEECCCCCCCCCCCCCCC------
Q 012188 169 CDCKFCTCWS---SSSRDTLFVKTQGPSAFWTE-------TLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSL------ 232 (468)
Q Consensus 169 ~~~~~~~~~~---~~~p~vl~lHG~g~s~~~~~-------~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~------ 232 (468)
+..++++.|. ..+++|||+||++.+...|. .+.+.|. ++||.|+++|+||||+|.......
T Consensus 47 ~~~~~~~~~~p~~~~~~~vvl~HG~g~~~~~~~~~pdg~~~~~~~l~---~~G~~V~~~D~~G~G~S~~~~~~~~~~~~~ 123 (328)
T 1qlw_A 47 VDQMYVRYQIPQRAKRYPITLIHGCCLTGMTWETTPDGRMGWDEYFL---RKGYSTYVIDQSGRGRSATDISAINAVKLG 123 (328)
T ss_dssp ESCEEEEEEEETTCCSSCEEEECCTTCCGGGGSSCTTSCCCHHHHHH---HTTCCEEEEECTTSTTSCCCCHHHHHHHTT
T ss_pred eeeEEEEEEccCCCCCccEEEEeCCCCCCCccccCCCCchHHHHHHH---HCCCeEEEECCCCcccCCCCCccccccccc
Confidence 3445555552 25689999999987666443 2566655 479999999999999997653210
Q ss_pred -----------------------CC----------------HHH------------------HHHHHHHHHhcccCCceE
Q 012188 233 -----------------------YT----------------VRE------------------HLDMIEKSVIEPNKVKSF 255 (468)
Q Consensus 233 -----------------------~t----------------~~~------------------~~~di~~~l~~~l~~~~i 255 (468)
+. +++ +++++ ..+++.++ ++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~l~~~~~--~~ 200 (328)
T 1qlw_A 124 KAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANL-SKLAIKLD--GT 200 (328)
T ss_dssp SSCGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHH-HHHHHHHT--SE
T ss_pred ccCcccccceeccchhhhhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHHH-HHHHHHhC--Cc
Confidence 00 344 66677 57777775 89
Q ss_pred EEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHHh
Q 012188 256 HIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLI 335 (468)
Q Consensus 256 ~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (468)
+++||||||.+++.+|.++|++|+++|+++|.... .
T Consensus 201 ~lvGhS~GG~~a~~~a~~~p~~v~~~v~~~p~~~~---~----------------------------------------- 236 (328)
T 1qlw_A 201 VLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGECP---K----------------------------------------- 236 (328)
T ss_dssp EEEEEGGGTTHHHHHHHHCCTTEEEEEEESCSCCC---C-----------------------------------------
T ss_pred eEEEECcccHHHHHHHHhChhheeEEEEeCCCCCC---C-----------------------------------------
Confidence 99999999999999999999999999999975300 0
Q ss_pred hccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccCh--
Q 012188 336 CKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPV-- 413 (468)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~-- 413 (468)
.......+++|+|+++|++|.++|+
T Consensus 237 -----------------------------------------------------~~~~~~~~~~PvLii~G~~D~~~p~~~ 263 (328)
T 1qlw_A 237 -----------------------------------------------------PEDVKPLTSIPVLVVFGDHIEEFPRWA 263 (328)
T ss_dssp -----------------------------------------------------GGGCGGGTTSCEEEEECSSCTTCTTTH
T ss_pred -----------------------------------------------------HHHHhhccCCCEEEEeccCCccccchh
Confidence 0000123479999999999999996
Q ss_pred ---hhHHHHHHhCC----CCeEEEecCCC-----ccccccCcHHHHHHHHHHHHhhcC
Q 012188 414 ---ECSYNVQRKIP----RARVKVIEKKD-----HITIVVGRQKTFARELEEIWRSSS 459 (468)
Q Consensus 414 ---~~~~~l~~~~p----~~~l~~i~~~g-----H~~~~~e~p~~~~~~i~~fl~~~~ 459 (468)
+.++.+.+.++ ++++++++++| |+.+.+.+++++.+.|.+||++..
T Consensus 264 ~~~~~~~~~~~~l~~~g~~~~~~~~~~~gi~G~~H~~~~~~~~~~~~~~i~~fl~~~~ 321 (328)
T 1qlw_A 264 PRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGRNT 321 (328)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHHHHTC
T ss_pred hHHHHHHHHHHHHHHhCCCceEEEcCCCCcCCCcccchhccCHHHHHHHHHHHHHhcc
Confidence 88888888876 78999999665 999983349999999999998754
|
| >3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.7e-22 Score=188.13 Aligned_cols=220 Identities=13% Similarity=0.083 Sum_probs=142.1
Q ss_pred CCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccC-CceEEE
Q 012188 179 SSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNK-VKSFHI 257 (468)
Q Consensus 179 ~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~-~~~i~l 257 (468)
+++++||++||++++...|..+.+ |. .+|+|+++|+||+|.++.+ .++++++++++ ..+++.+. .+++++
T Consensus 19 ~~~~~lv~lhg~~~~~~~~~~~~~-l~----~~~~v~~~d~~G~~~~~~~---~~~~~~~~~~~-~~~i~~~~~~~~~~l 89 (265)
T 3ils_A 19 VARKTLFMLPDGGGSAFSYASLPR-LK----SDTAVVGLNCPYARDPENM---NCTHGAMIESF-CNEIRRRQPRGPYHL 89 (265)
T ss_dssp TSSEEEEEECCTTCCGGGGTTSCC-CS----SSEEEEEEECTTTTCGGGC---CCCHHHHHHHH-HHHHHHHCSSCCEEE
T ss_pred CCCCEEEEECCCCCCHHHHHHHHh-cC----CCCEEEEEECCCCCCCCCC---CCCHHHHHHHH-HHHHHHhCCCCCEEE
Confidence 346799999999988776666766 66 8999999999999777544 36899999999 57777764 469999
Q ss_pred EEEcccHHHHHHHHH---hCCCccceEEEecCCCCCCCCCc-hhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHH
Q 012188 258 VAHSLGCILALALAV---KHPGSVKSLTLLAPPYYPVPKGA-QASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICL 333 (468)
Q Consensus 258 vGhS~Gg~ial~~a~---~~p~~v~~lVl~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (468)
+||||||.+|+.+|. .+|++++++|+++++........ .........+......+....
T Consensus 90 ~GhS~Gg~ia~~~a~~l~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 152 (265)
T 3ils_A 90 GGWSSGGAFAYVVAEALVNQGEEVHSLIIIDAPIPQAMEQLPRAFYEHCNSIGLFATQPGASP----------------- 152 (265)
T ss_dssp EEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCSSCCCCCCCHHHHHHHHHTTTTTTSSSSCS-----------------
T ss_pred EEECHhHHHHHHHHHHHHhCCCCceEEEEEcCCCCCcccccCHHHHHHHHHHHHhCCCccccc-----------------
Confidence 999999999999998 77888999999997654322111 001111111111100000000
Q ss_pred HhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEE-EEeeCC---CC
Q 012188 334 LICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVN-VFHGED---DE 409 (468)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvL-ii~G~~---D~ 409 (468)
.......+.....+ ....... ..+.......+++|++ +++|++ |.
T Consensus 153 --~~~~~~~~~~~~~~----------------------~~~~~~~-------~~~~~~~~~~i~~P~~lii~G~~~~~D~ 201 (265)
T 3ils_A 153 --DGSTEPPSYLIPHF----------------------TAVVDVM-------LDYKLAPLHARRMPKVGIVWAADTVMDE 201 (265)
T ss_dssp --SSCSCCCTTHHHHH----------------------HHHHHHT-------TTCCCCCCCCSSCCEEEEEEEEECSSCT
T ss_pred --cCCHHHHHHHHHHH----------------------HHHHHHH-------HhcCCCCCccCCCCeEEEEEccCCCCcc
Confidence 00000000000000 0000000 0000001136789988 999999 99
Q ss_pred cc--------------ChhhHHHHHHhCC--CCeEEEecCCCcccc--ccCcHHHHHHHHHHHHh
Q 012188 410 LI--------------PVECSYNVQRKIP--RARVKVIEKKDHITI--VVGRQKTFARELEEIWR 456 (468)
Q Consensus 410 ~v--------------p~~~~~~l~~~~p--~~~l~~i~~~gH~~~--~~e~p~~~~~~i~~fl~ 456 (468)
.+ +......+.+..+ ++++++++|+||+.+ . ++|+++++.|.+||+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~i~gagH~~~~~~-e~~~~v~~~i~~fL~ 265 (265)
T 3ils_A 202 RDAPKMKGMHFMIQKRTEFGPDGWDTIMPGASFDIVRADGANHFTLMQK-EHVSIISDLIDRVMA 265 (265)
T ss_dssp TTSCCCSSCCTTTSCCCCCSCTTHHHHSTTCCEEEEEEEEEETTGGGST-TTTHHHHHHHHHHTC
T ss_pred ccCccccCcchhhccccccCcchHHHhCCccceeEEEcCCCCcceeeCh-hhHHHHHHHHHHHhC
Confidence 88 4444556666665 789999999999999 6 899999999999973
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1e-21 Score=179.91 Aligned_cols=189 Identities=13% Similarity=0.047 Sum_probs=142.8
Q ss_pred CCCceeEEEecC---CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCC--------------
Q 012188 168 DCDCKFCTCWSS---SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD-------------- 230 (468)
Q Consensus 168 d~~~~~~~~~~~---~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~-------------- 230 (468)
||..+.++.+.+ +.|+||++||++++...+..+...|. ++||.|+++|+||+|.|.....
T Consensus 12 ~g~~l~~~~~~p~~~~~p~vv~~hG~~~~~~~~~~~~~~l~---~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~ 88 (236)
T 1zi8_A 12 DGHTFGALVGSPAKAPAPVIVIAQDIFGVNAFMRETVSWLV---DQGYAAVCPDLYARQAPGTALDPQDERQREQAYKLW 88 (236)
T ss_dssp TSCEECEEEECCSSCSEEEEEEECCTTBSCHHHHHHHHHHH---HTTCEEEEECGGGGTSTTCBCCTTCHHHHHHHHHHH
T ss_pred CCCeEEEEEECCCCCCCCEEEEEcCCCCCCHHHHHHHHHHH---hCCcEEEeccccccCCCcccccccchhhhhhhhhhh
Confidence 555566666643 34789999999887766666777776 4699999999999999864221
Q ss_pred CCCCHHHHHHHHHHHHhcccC-----CceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhh
Q 012188 231 SLYTVREHLDMIEKSVIEPNK-----VKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKV 305 (468)
Q Consensus 231 ~~~t~~~~~~di~~~l~~~l~-----~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~ 305 (468)
...+..+.++|+ ..+++.+. .++++++|||+||.+++.++.++| +++++++.|....
T Consensus 89 ~~~~~~~~~~d~-~~~~~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~--------------- 150 (236)
T 1zi8_A 89 QAFDMEAGVGDL-EAAIRYARHQPYSNGKVGLVGYSLGGALAFLVASKGY--VDRAVGYYGVGLE--------------- 150 (236)
T ss_dssp HHCCHHHHHHHH-HHHHHHHTSSTTEEEEEEEEEETHHHHHHHHHHHHTC--SSEEEEESCSSGG---------------
T ss_pred hccCcchhhHHH-HHHHHHHHhccCCCCCEEEEEECcCHHHHHHHhccCC--ccEEEEecCcccc---------------
Confidence 123556667777 45555443 468999999999999999999999 9999988764210
Q ss_pred cCCCCCchhhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccc
Q 012188 306 APRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKL 385 (468)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (468)
.
T Consensus 151 ------------------------------------------------------~------------------------- 151 (236)
T 1zi8_A 151 ------------------------------------------------------K------------------------- 151 (236)
T ss_dssp ------------------------------------------------------G-------------------------
T ss_pred ------------------------------------------------------c-------------------------
Confidence 0
Q ss_pred cchHHHhhccCCCcEEEEeeCCCCccChhhHHHHHHhC---CCCeEEEecCCCccccccCc--------HHHHHHHHHHH
Q 012188 386 DGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKI---PRARVKVIEKKDHITIVVGR--------QKTFARELEEI 454 (468)
Q Consensus 386 ~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~---p~~~l~~i~~~gH~~~~~e~--------p~~~~~~i~~f 454 (468)
....+.++++|+++++|++|.++|.+.++.+.+.+ ++.++++++++||.... +. .+++.+.+.+|
T Consensus 152 ---~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~-~~~~~~~~~~~~~~~~~i~~f 227 (236)
T 1zi8_A 152 ---QLNKVPEVKHPALFHMGGQDHFVPAPSRQLITEGFGANPLLQVHWYEEAGHSFAR-TGSSGYVASAAALANERTLDF 227 (236)
T ss_dssp ---CGGGGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHTTCTTEEEEEETTCCTTTTC-TTSTTCCHHHHHHHHHHHHHH
T ss_pred ---chhhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCceEEEECCCCccccc-CCCCccCHHHHHHHHHHHHHH
Confidence 00112466899999999999999999999998887 67899999999998775 33 35788999999
Q ss_pred HhhcCC
Q 012188 455 WRSSSG 460 (468)
Q Consensus 455 l~~~~~ 460 (468)
|++.-.
T Consensus 228 l~~~l~ 233 (236)
T 1zi8_A 228 LVPLQS 233 (236)
T ss_dssp HGGGCC
T ss_pred HHHhcC
Confidence 987643
|
| >3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=99.88 E-value=7.6e-22 Score=175.21 Aligned_cols=168 Identities=11% Similarity=0.075 Sum_probs=131.4
Q ss_pred CCCeEEEEecCCCCc-cchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceEEEE
Q 012188 180 SSRDTLFVKTQGPSA-FWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIV 258 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~-~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i~lv 258 (468)
++|+|||+||++++. ..+...+..+. . .++.+|++|++ .++++++++++ ..+++.++ ++++++
T Consensus 16 ~~~~vv~~HG~~~~~~~~~~~~~~~~~---~---~~~~v~~~~~~--------~~~~~~~~~~~-~~~~~~~~-~~~~l~ 79 (191)
T 3bdv_A 16 QQLTMVLVPGLRDSDDEHWQSHWERRF---P---HWQRIRQREWY--------QADLDRWVLAI-RRELSVCT-QPVILI 79 (191)
T ss_dssp TTCEEEEECCTTCCCTTSHHHHHHHHC---T---TSEECCCSCCS--------SCCHHHHHHHH-HHHHHTCS-SCEEEE
T ss_pred CCceEEEECCCCCCchhhHHHHHHHhc---C---CeEEEeccCCC--------CcCHHHHHHHH-HHHHHhcC-CCeEEE
Confidence 468999999998765 33333444322 1 34667888874 35899999999 68888888 899999
Q ss_pred EEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHHhhcc
Q 012188 259 AHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKN 338 (468)
Q Consensus 259 GhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (468)
||||||.+++.++.++|++++++|+++|+...... ++
T Consensus 80 G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~-----------------~~-------------------------- 116 (191)
T 3bdv_A 80 GHSFGALAACHVVQQGQEGIAGVMLVAPAEPMRFE-----------------ID-------------------------- 116 (191)
T ss_dssp EETHHHHHHHHHHHTTCSSEEEEEEESCCCGGGGT-----------------CT--------------------------
T ss_pred EEChHHHHHHHHHHhcCCCccEEEEECCCcccccc-----------------Cc--------------------------
Confidence 99999999999999999999999999986532000 00
Q ss_pred chhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChhhHHH
Q 012188 339 HRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYN 418 (468)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~ 418 (468)
.. ..+.++++|+++++|++|.++|++.++.
T Consensus 117 ---------------------~~-----------------------------~~~~~~~~P~lii~g~~D~~~~~~~~~~ 146 (191)
T 3bdv_A 117 ---------------------DR-----------------------------IQASPLSVPTLTFASHNDPLMSFTRAQY 146 (191)
T ss_dssp ---------------------TT-----------------------------SCSSCCSSCEEEEECSSBTTBCHHHHHH
T ss_pred ---------------------cc-----------------------------cccccCCCCEEEEecCCCCcCCHHHHHH
Confidence 00 1125678999999999999999999999
Q ss_pred HHHhCCCCeEEEecCCCcccccc---CcHHHHHHHHHHHHhhc
Q 012188 419 VQRKIPRARVKVIEKKDHITIVV---GRQKTFARELEEIWRSS 458 (468)
Q Consensus 419 l~~~~p~~~l~~i~~~gH~~~~~---e~p~~~~~~i~~fl~~~ 458 (468)
+.+.+ ++++++++++||+.+.+ +.|+.+ +.|.+|+++.
T Consensus 147 ~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~-~~i~~fl~~~ 187 (191)
T 3bdv_A 147 WAQAW-DSELVDVGEAGHINAEAGFGPWEYGL-KRLAEFSEIL 187 (191)
T ss_dssp HHHHH-TCEEEECCSCTTSSGGGTCSSCHHHH-HHHHHHHHTT
T ss_pred HHHhc-CCcEEEeCCCCcccccccchhHHHHH-HHHHHHHHHh
Confidence 98887 89999999999999863 456665 9999999875
|
| >4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.6e-22 Score=180.01 Aligned_cols=193 Identities=12% Similarity=0.085 Sum_probs=123.4
Q ss_pred CeEEEEecCCCCcc-ch-hhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceEEEEE
Q 012188 182 RDTLFVKTQGPSAF-WT-ETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVA 259 (468)
Q Consensus 182 p~vl~lHG~g~s~~-~~-~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i~lvG 259 (468)
|+|||+||++++.. |. ..+...+. ....+|+|+++|+||||+ +..+++ ..+++..+.++++|+|
T Consensus 3 ptIl~lHGf~ss~~s~k~~~l~~~~~-~~~~~~~v~~pdl~~~g~------------~~~~~l-~~~~~~~~~~~i~l~G 68 (202)
T 4fle_A 3 STLLYIHGFNSSPSSAKATTFKSWLQ-QHHPHIEMQIPQLPPYPA------------EAAEML-ESIVMDKAGQSIGIVG 68 (202)
T ss_dssp CEEEEECCTTCCTTCHHHHHHHHHHH-HHCTTSEEECCCCCSSHH------------HHHHHH-HHHHHHHTTSCEEEEE
T ss_pred cEEEEeCCCCCCCCccHHHHHHHHHH-HcCCCcEEEEeCCCCCHH------------HHHHHH-HHHHHhcCCCcEEEEE
Confidence 79999999877654 22 22223332 112579999999999874 345666 5777777889999999
Q ss_pred EcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHHhhccc
Q 012188 260 HSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKNH 339 (468)
Q Consensus 260 hS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (468)
|||||.+|+.+|.++|..+..++...++.. .............. .. ..
T Consensus 69 ~SmGG~~a~~~a~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~---~~-------------------~~ 116 (202)
T 4fle_A 69 SSLGGYFATWLSQRFSIPAVVVNPAVRPFE----------LLSDYLGENQNPYT---GQ-------------------KY 116 (202)
T ss_dssp ETHHHHHHHHHHHHTTCCEEEESCCSSHHH----------HGGGGCEEEECTTT---CC-------------------EE
T ss_pred EChhhHHHHHHHHHhcccchheeeccchHH----------HHHHhhhhhccccc---cc-------------------cc
Confidence 999999999999999988777665443210 00000000000000 00 00
Q ss_pred hhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChhhHHHH
Q 012188 340 RVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNV 419 (468)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l 419 (468)
.... ...... ........++++|+|+|||++|.+||++.+.++
T Consensus 117 ~~~~----------------------------~~~~~~---------~~~~~~~~~~~~P~LiihG~~D~~Vp~~~s~~l 159 (202)
T 4fle_A 117 VLES----------------------------RHIYDL---------KAMQIEKLESPDLLWLLQQTGDEVLDYRQAVAY 159 (202)
T ss_dssp EECH----------------------------HHHHHH---------HTTCCSSCSCGGGEEEEEETTCSSSCHHHHHHH
T ss_pred cchH----------------------------HHHHHH---------HhhhhhhhccCceEEEEEeCCCCCCCHHHHHHH
Confidence 0000 000000 000011246689999999999999999988766
Q ss_pred HHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhcCCCCC
Q 012188 420 QRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSSSGHEP 463 (468)
Q Consensus 420 ~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~~~~~ 463 (468)
++++++.+++|+||.. ++++++.+.|.+||+-.+.-+.
T Consensus 160 ---~~~~~l~i~~g~~H~~---~~~~~~~~~I~~FL~~a~~l~~ 197 (202)
T 4fle_A 160 ---YTPCRQTVESGGNHAF---VGFDHYFSPIVTFLGLATALEH 197 (202)
T ss_dssp ---TTTSEEEEESSCCTTC---TTGGGGHHHHHHHHTCCCCTTC
T ss_pred ---hhCCEEEEECCCCcCC---CCHHHHHHHHHHHHhhhhhccc
Confidence 4789999999999963 4667888999999986544443
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.88 E-value=7.4e-21 Score=172.33 Aligned_cols=173 Identities=12% Similarity=0.111 Sum_probs=132.3
Q ss_pred CCeEEEEecCC---C--CccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCC-CHHHHHHHHHHHHhcccCCce
Q 012188 181 SRDTLFVKTQG---P--SAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLY-TVREHLDMIEKSVIEPNKVKS 254 (468)
Q Consensus 181 ~p~vl~lHG~g---~--s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~-t~~~~~~di~~~l~~~l~~~~ 254 (468)
+|+||++||++ + ...++..+.+.|. ++||.|+++|+||+|.|+.+..... ..++..+.+ +.+.+..+.++
T Consensus 37 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~---~~g~~v~~~d~~g~g~s~~~~~~~~~~~~d~~~~~-~~l~~~~~~~~ 112 (220)
T 2fuk_A 37 PVTAIVCHPLSTEGGSMHNKVVTMAARALR---ELGITVVRFNFRSVGTSAGSFDHGDGEQDDLRAVA-EWVRAQRPTDT 112 (220)
T ss_dssp SEEEEEECSCTTTTCSTTCHHHHHHHHHHH---TTTCEEEEECCTTSTTCCSCCCTTTHHHHHHHHHH-HHHHHHCTTSE
T ss_pred cCEEEEECCCCCcCCcccchHHHHHHHHHH---HCCCeEEEEecCCCCCCCCCcccCchhHHHHHHHH-HHHHhcCCCCc
Confidence 67899999954 2 2223345666665 5799999999999999976653211 223333333 45555566679
Q ss_pred EEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHH
Q 012188 255 FHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLL 334 (468)
Q Consensus 255 i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (468)
++++|||+||.+++.++.++ +++++|+++|+.....
T Consensus 113 i~l~G~S~Gg~~a~~~a~~~--~v~~~v~~~~~~~~~~------------------------------------------ 148 (220)
T 2fuk_A 113 LWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRWD------------------------------------------ 148 (220)
T ss_dssp EEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTBC------------------------------------------
T ss_pred EEEEEECHHHHHHHHHHhhc--cccEEEEecccccchh------------------------------------------
Confidence 99999999999999999988 8999999998754310
Q ss_pred hhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChh
Q 012188 335 ICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVE 414 (468)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~ 414 (468)
. .. .....|+++++|++|.++|.+
T Consensus 149 ------------------------~-----------------------~~---------~~~~~p~l~i~g~~D~~~~~~ 172 (220)
T 2fuk_A 149 ------------------------F-----------------------SD---------VQPPAQWLVIQGDADEIVDPQ 172 (220)
T ss_dssp ------------------------C-----------------------TT---------CCCCSSEEEEEETTCSSSCHH
T ss_pred ------------------------h-----------------------hh---------cccCCcEEEEECCCCcccCHH
Confidence 0 00 011579999999999999999
Q ss_pred hHHHHHHhC-CCCeEEEecCCCccccccCcHHHHHHHHHHHHhhcC
Q 012188 415 CSYNVQRKI-PRARVKVIEKKDHITIVVGRQKTFARELEEIWRSSS 459 (468)
Q Consensus 415 ~~~~l~~~~-p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~ 459 (468)
.++.+.+.+ ++.++++++++||..+. +++++.+.+.+|+++--
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~H~~~~--~~~~~~~~i~~~l~~~l 216 (220)
T 2fuk_A 173 AVYDWLETLEQQPTLVRMPDTSHFFHR--KLIDLRGALQHGVRRWL 216 (220)
T ss_dssp HHHHHHTTCSSCCEEEEETTCCTTCTT--CHHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHhCcCCcEEEeCCCCceehh--hHHHHHHHHHHHHHHHh
Confidence 999999998 88999999999999875 58899999999998753
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.9e-21 Score=187.19 Aligned_cols=225 Identities=14% Similarity=0.122 Sum_probs=142.7
Q ss_pred CCCceeEEEec----CCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCC-------------
Q 012188 168 DCDCKFCTCWS----SSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD------------- 230 (468)
Q Consensus 168 d~~~~~~~~~~----~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~------------- 230 (468)
+|..+.++.+. ++.|+||++||++++...+..+...+. .||.|+++|+||+|.|+.+..
T Consensus 91 ~g~~l~~~~~~P~~~~~~p~vv~~HG~g~~~~~~~~~~~~~~----~G~~v~~~D~rG~g~s~~~~~~~~~~~~~~~~~~ 166 (346)
T 3fcy_A 91 RGARIHAKYIKPKTEGKHPALIRFHGYSSNSGDWNDKLNYVA----AGFTVVAMDVRGQGGQSQDVGGVTGNTLNGHIIR 166 (346)
T ss_dssp GGCEEEEEEEEESCSSCEEEEEEECCTTCCSCCSGGGHHHHT----TTCEEEEECCTTSSSSCCCCCCCSSCCSBCSSST
T ss_pred CCCEEEEEEEecCCCCCcCEEEEECCCCCCCCChhhhhHHHh----CCcEEEEEcCCCCCCCCCCCcccCCCCcCcceec
Confidence 55567666662 345899999999886654444555554 899999999999999976532
Q ss_pred ------CCCCHHHHHHHHH---HHHhcc--cCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhH
Q 012188 231 ------SLYTVREHLDMIE---KSVIEP--NKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQ 299 (468)
Q Consensus 231 ------~~~t~~~~~~di~---~~l~~~--l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~ 299 (468)
..+...+.++|+. +.+... ++.++++++|||+||.+++.+|.++|+ |+++|+++|.... ..
T Consensus 167 g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~-v~~~vl~~p~~~~-------~~ 238 (346)
T 3fcy_A 167 GLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR-VRKVVSEYPFLSD-------YK 238 (346)
T ss_dssp TTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT-CCEEEEESCSSCC-------HH
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCcc-ccEEEECCCcccC-------HH
Confidence 1122333344442 222222 244799999999999999999999998 9999999876432 11
Q ss_pred HHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHh
Q 012188 300 YVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIIC 379 (468)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (468)
...........+ .....+..... .... .. ......+
T Consensus 239 ~~~~~~~~~~~~------~~~~~~~~~~~--------~~~~------------~~-------------~~~~~~~----- 274 (346)
T 3fcy_A 239 RVWDLDLAKNAY------QEITDYFRLFD--------PRHE------------RE-------------NEVFTKL----- 274 (346)
T ss_dssp HHHHTTCCCGGG------HHHHHHHHHHC--------TTCT------------TH-------------HHHHHHH-----
T ss_pred HHhhccccccch------HHHHHHHHhcC--------CCcc------------hH-------------HHHHHHh-----
Confidence 111110000000 00000000000 0000 00 0000000
Q ss_pred cccccccchHHHhhccCCCcEEEEeeCCCCccChhhHHHHHHhCC-CCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 380 GTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIP-RARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 380 ~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p-~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
........+.++++|+++++|++|.++|++.+..+.+.++ ++++++++++||..+ +++.+.+.+||++.
T Consensus 275 -----~~~d~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-----~~~~~~i~~fl~~l 344 (346)
T 3fcy_A 275 -----GYIDVKNLAKRIKGDVLMCVGLMDQVCPPSTVFAAYNNIQSKKDIKVYPDYGHEPM-----RGFGDLAMQFMLEL 344 (346)
T ss_dssp -----GGGCHHHHGGGCCSEEEEEEETTCSSSCHHHHHHHHTTCCSSEEEEEETTCCSSCC-----TTHHHHHHHHHHTT
T ss_pred -----CcccHHHHHHhcCCCEEEEeeCCCCcCCHHHHHHHHHhcCCCcEEEEeCCCCCcCH-----HHHHHHHHHHHHHh
Confidence 0011233347789999999999999999999999999987 689999999999986 46788899999764
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A | Back alignment and structure |
|---|
Probab=99.87 E-value=7.9e-22 Score=182.01 Aligned_cols=216 Identities=13% Similarity=0.197 Sum_probs=130.5
Q ss_pred CCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCC---ceE
Q 012188 179 SSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKV---KSF 255 (468)
Q Consensus 179 ~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~---~~i 255 (468)
+++++|||+||++++...|..+.+.|+ ++|+|+++|+||||.|+.+. ..++.+.+ ..+++.++. +++
T Consensus 11 ~~~~~lv~lhg~g~~~~~~~~~~~~L~----~~~~vi~~Dl~GhG~S~~~~-----~~~~~~~~-~~~~~~l~~~~~~~~ 80 (242)
T 2k2q_B 11 SEKTQLICFPFAGGYSASFRPLHAFLQ----GECEMLAAEPPGHGTNQTSA-----IEDLEELT-DLYKQELNLRPDRPF 80 (242)
T ss_dssp TCCCEEESSCCCCHHHHHHHHHHHHHC----CSCCCEEEECCSSCCSCCCT-----TTHHHHHH-HHTTTTCCCCCCSSC
T ss_pred CCCceEEEECCCCCCHHHHHHHHHhCC----CCeEEEEEeCCCCCCCCCCC-----cCCHHHHH-HHHHHHHHhhcCCCE
Confidence 356789999999988776667888887 78999999999999996532 23444444 466666665 689
Q ss_pred EEEEEcccHHHHHHHHHh------CCCccceEEEecC--CCCCCCC-CchhhHHHHHhhcCCCCCchhhhhhhhHHHHHH
Q 012188 256 HIVAHSLGCILALALAVK------HPGSVKSLTLLAP--PYYPVPK-GAQASQYVMRKVAPRRVWPLIAFGASMACWYEH 326 (468)
Q Consensus 256 ~lvGhS~Gg~ial~~a~~------~p~~v~~lVl~~p--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (468)
+|+||||||.+|+.+|.+ +|+. +++.+. +...... ...........+......
T Consensus 81 ~lvGhSmGG~iA~~~A~~~~~~~~~p~~---v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 142 (242)
T 2k2q_B 81 VLFGHSMGGMITFRLAQKLEREGIFPQA---VIISAIQPPHIQRKKVSHLPDDQFLDHIIQLGGM--------------- 142 (242)
T ss_dssp EEECCSSCCHHHHHHHHHHHHHHCSSCS---EEEEEEECSCCCSCCCSSCTTHHHHHTTCCTTCC---------------
T ss_pred EEEeCCHhHHHHHHHHHHHHHcCCCCCE---EEEECCCCCCCCcccccCCCHHHHHHHHHHhCCC---------------
Confidence 999999999999999987 5664 343331 1111000 000000001000000000
Q ss_pred HhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeC
Q 012188 327 ISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGE 406 (468)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~ 406 (468)
...... ... ....+. .. +.......... .. .. +.++++|+++++|+
T Consensus 143 -----------~~~~~~-------~~~----~~~~~~-~~----~~~~~~~~~~~--~~----~~-l~~i~~P~lvi~G~ 188 (242)
T 2k2q_B 143 -----------PAELVE-------NKE----VMSFFL-PS----FRSDYRALEQF--EL----YD-LAQIQSPVHVFNGL 188 (242)
T ss_dssp -----------CCTTTH-------HHH----TTTTCC-SC----HHHHHHHHTCC--CC----SC-CTTCCCSEEEEEEC
T ss_pred -----------ChHHhc-------CHH----HHHHHH-HH----HHHHHHHHHhc--cc----CC-CCccCCCEEEEeeC
Confidence 000000 000 000000 00 00000000000 00 01 35789999999999
Q ss_pred CCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhcC
Q 012188 407 DDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSSS 459 (468)
Q Consensus 407 ~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~ 459 (468)
+|.+++ .....+.+..++.+++++++ ||+++. ++|+++++.|.+||++..
T Consensus 189 ~D~~~~-~~~~~~~~~~~~~~~~~~~~-gH~~~~-e~p~~~~~~i~~fl~~~~ 238 (242)
T 2k2q_B 189 DDKKCI-RDAEGWKKWAKDITFHQFDG-GHMFLL-SQTEEVAERIFAILNQHP 238 (242)
T ss_dssp SSCCHH-HHHHHHHTTCCCSEEEEEEC-CCSHHH-HHCHHHHHHHHHHHHTTT
T ss_pred CCCcCH-HHHHHHHHHhcCCeEEEEeC-CceeEc-CCHHHHHHHHHHHhhccC
Confidence 999875 44566777778888999985 999997 899999999999998643
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.87 E-value=7e-22 Score=180.45 Aligned_cols=176 Identities=15% Similarity=0.195 Sum_probs=130.9
Q ss_pred CCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEE-------------------CCCCCCCCCCCCCCCCCHHHHH
Q 012188 179 SSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAI-------------------DLLGFGRSPKPTDSLYTVREHL 239 (468)
Q Consensus 179 ~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~-------------------D~~G~G~S~~~~~~~~t~~~~~ 239 (468)
+++|+||++||++++...+..+.+.|. +.||+|+++ |++|+ .+.. ....+++++.+
T Consensus 21 ~~~~~vv~lHG~~~~~~~~~~~~~~l~---~~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~-~~~~-~~~~~~~~~~~ 95 (232)
T 1fj2_A 21 KATAAVIFLHGLGDTGHGWAEAFAGIR---SSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGL-SPDS-QEDESGIKQAA 95 (232)
T ss_dssp CCSEEEEEECCSSSCHHHHHHHHHTTC---CTTEEEEECCCCEEEEGGGTTEEEECSSCBCCC-STTC-CBCHHHHHHHH
T ss_pred CCCceEEEEecCCCccchHHHHHHHHh---cCCcEEEecCCCccccccccccccccccccccC-Cccc-ccccHHHHHHH
Confidence 456899999999987766666777665 469999998 66666 2222 22345778888
Q ss_pred HHHHHHHhccc---CC--ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchh
Q 012188 240 DMIEKSVIEPN---KV--KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLI 314 (468)
Q Consensus 240 ~di~~~l~~~l---~~--~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (468)
+++ ..+++.+ +. ++++++||||||.+++.++.++|++++++|++++........ +
T Consensus 96 ~~~-~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~-----------------~-- 155 (232)
T 1fj2_A 96 ENI-KALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASF-----------------P-- 155 (232)
T ss_dssp HHH-HHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGGS-----------------C--
T ss_pred HHH-HHHHHHHhcCCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCccc-----------------c--
Confidence 888 5777664 65 799999999999999999999999999999999865320000 0
Q ss_pred hhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhc
Q 012188 315 AFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRN 394 (468)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (468)
. . .....
T Consensus 156 ---------------------------------------------~-----------------------~-----~~~~~ 162 (232)
T 1fj2_A 156 ---------------------------------------------Q-----------------------G-----PIGGA 162 (232)
T ss_dssp ---------------------------------------------S-----------------------S-----CCCST
T ss_pred ---------------------------------------------c-----------------------c-----ccccc
Confidence 0 0 00124
Q ss_pred cCCCcEEEEeeCCCCccChhhHHHHHHhC------CCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 395 HVKCDVNVFHGEDDELIPVECSYNVQRKI------PRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 395 ~i~~PvLii~G~~D~~vp~~~~~~l~~~~------p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
.+++|+++++|++|.++|.+.++.+.+.+ ++.++++++++||.... +.. +.+.+||++
T Consensus 163 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~H~~~~-~~~----~~i~~~l~~ 226 (232)
T 1fj2_A 163 NRDISILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSCQ-QEM----MDVKQFIDK 226 (232)
T ss_dssp TTTCCEEEEEETTCSSSCHHHHHHHHHHHHHHSCGGGEEEEEETTCCSSCCH-HHH----HHHHHHHHH
T ss_pred cCCCCEEEEecCCCccCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCcccCH-HHH----HHHHHHHHH
Confidence 56899999999999999999888777766 56899999999999854 444 555566654
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A | Back alignment and structure |
|---|
Probab=99.87 E-value=4.6e-22 Score=190.05 Aligned_cols=213 Identities=14% Similarity=0.141 Sum_probs=141.9
Q ss_pred cCCCCeEEEEecCCCCc--cchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceE
Q 012188 178 SSSSRDTLFVKTQGPSA--FWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSF 255 (468)
Q Consensus 178 ~~~~p~vl~lHG~g~s~--~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i 255 (468)
.+++|+|||+||++++. ..|..+.+.|. .+|+|+++|+||||.|+.. .++++++++++...+++.++.+++
T Consensus 64 ~~~~~~lvllhG~~~~~~~~~~~~~~~~l~----~~~~v~~~d~~G~G~s~~~---~~~~~~~a~~~~~~l~~~~~~~~~ 136 (300)
T 1kez_A 64 GPGEVTVICCAGTAAISGPHEFTRLAGALR----GIAPVRAVPQPGYEEGEPL---PSSMAAVAAVQADAVIRTQGDKPF 136 (300)
T ss_dssp CSCSSEEEECCCSSTTCSTTTTHHHHHHTS----SSCCBCCCCCTTSSTTCCB---CSSHHHHHHHHHHHHHHHCSSCCE
T ss_pred CCCCCeEEEECCCcccCcHHHHHHHHHhcC----CCceEEEecCCCCCCCCCC---CCCHHHHHHHHHHHHHHhcCCCCE
Confidence 45678999999998865 55556777776 7899999999999998754 369999999985467788888999
Q ss_pred EEEEEcccHHHHHHHHHhCC---CccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHH
Q 012188 256 HIVAHSLGCILALALAVKHP---GSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTIC 332 (468)
Q Consensus 256 ~lvGhS~Gg~ial~~a~~~p---~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (468)
+|+||||||.+++.+|.++| ++++++|++++...... ...... ...+. .
T Consensus 137 ~LvGhS~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~~---~~~~~~----------------------~~~~~---~ 188 (300)
T 1kez_A 137 VVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQ---DAMNAW----------------------LEELT---A 188 (300)
T ss_dssp EEECCTHHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTTC---HHHHHH----------------------HHHHH---G
T ss_pred EEEEECHhHHHHHHHHHHHHhcCCCccEEEEECCCCCcch---hHHHHH----------------------HHHHH---H
Confidence 99999999999999999998 48999999997653211 000000 00000 0
Q ss_pred HHhhccc-hhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCcc
Q 012188 333 LLICKNH-RVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELI 411 (468)
Q Consensus 333 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~v 411 (468)
..+.... ...+. .. ..+....... ..+ ....+++|+++|+|+ |..+
T Consensus 189 ~~~~~~~~~~~~~--------~~--------------~~~~~~~~~~-------~~~---~~~~i~~P~lii~G~-d~~~ 235 (300)
T 1kez_A 189 TLFDRETVRMDDT--------RL--------------TALGAYDRLT-------GQW---RPRETGLPTLLVSAG-EPMG 235 (300)
T ss_dssp GGCCCCSSCCCHH--------HH--------------HHHHHHHHHT-------TTC---CCCCCSCCBEEEEES-SCSS
T ss_pred HHHhCcCCccchH--------HH--------------HHHHHHHHHH-------hcC---CCCCCCCCEEEEEeC-CCCC
Confidence 0000000 00000 00 0000000000 000 125779999999995 5555
Q ss_pred ChhhHHHHHHhCC-CCeEEEecCCCccccccCcHHHHHHHHHHHHhhcCC
Q 012188 412 PVECSYNVQRKIP-RARVKVIEKKDHITIVVGRQKTFARELEEIWRSSSG 460 (468)
Q Consensus 412 p~~~~~~l~~~~p-~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~~ 460 (468)
++.. ..+.+.++ +.+++++++ ||+.++.++|+++++.|.+||++...
T Consensus 236 ~~~~-~~~~~~~~~~~~~~~i~g-gH~~~~~e~~~~~~~~i~~fl~~~~~ 283 (300)
T 1kez_A 236 PWPD-DSWKPTWPFEHDTVAVPG-DHFTMVQEHADAIARHIDAWLGGGNS 283 (300)
T ss_dssp CCCS-SCCSCCCSSCCEEEEESS-CTTTSSSSCSHHHHHHHHHHHTCC--
T ss_pred CCcc-cchhhhcCCCCeEEEecC-CChhhccccHHHHHHHHHHHHHhccC
Confidence 5544 34555556 479999999 99998548999999999999987543
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.1e-21 Score=184.47 Aligned_cols=206 Identities=12% Similarity=0.145 Sum_probs=136.7
Q ss_pred CCCCeEEEEecCC-----CCccchhhhhhhccc-cCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCC
Q 012188 179 SSSRDTLFVKTQG-----PSAFWTETLFPNFSS-ASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKV 252 (468)
Q Consensus 179 ~~~p~vl~lHG~g-----~s~~~~~~~~~~L~~-~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~ 252 (468)
+++|+|||+||++ ++...+..+.+.|.. ..+.||+|+++|+|+.+.+..+ ..+++..+.+ ..++++++.
T Consensus 39 ~~~p~vv~lHGgg~~~g~~~~~~~~~~~~~L~~~a~~~g~~vi~~d~r~~~~~~~~----~~~~d~~~~~-~~l~~~~~~ 113 (273)
T 1vkh_A 39 NTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEITNP----RNLYDAVSNI-TRLVKEKGL 113 (273)
T ss_dssp TCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSCTT----HHHHHHHHHH-HHHHHHHTC
T ss_pred CCCeEEEEECCCcccCCcCChHHHHHHHHHHhhhhccCCcEEEEeecccCCCCCCC----cHHHHHHHHH-HHHHHhCCc
Confidence 3468999999966 234444556676600 0148999999999987755322 3567777777 688888888
Q ss_pred ceEEEEEEcccHHHHHHHHHhC-----------------CCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhh
Q 012188 253 KSFHIVAHSLGCILALALAVKH-----------------PGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIA 315 (468)
Q Consensus 253 ~~i~lvGhS~Gg~ial~~a~~~-----------------p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (468)
++++++||||||.+++.++.++ |++++++|++++.... .......
T Consensus 114 ~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~--------~~~~~~~---------- 175 (273)
T 1vkh_A 114 TNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSL--------KELLIEY---------- 175 (273)
T ss_dssp CCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCH--------HHHHHHC----------
T ss_pred CcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccH--------HHhhhhc----------
Confidence 9999999999999999999986 8899999999876422 0000000
Q ss_pred hhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHh-hHhHHHhcccccccchHHHhhc
Q 012188 316 FGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWH-TLHNIICGTANKLDGYLDAVRN 394 (468)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 394 (468)
..+ .......+.. ....|. ... ....+......
T Consensus 176 -----~~~------------------~~~~~~~~~~---------------~~~~~~~~~~--------~~~~~~~~~~~ 209 (273)
T 1vkh_A 176 -----PEY------------------DCFTRLAFPD---------------GIQMYEEEPS--------RVMPYVKKALS 209 (273)
T ss_dssp -----GGG------------------HHHHHHHCTT---------------CGGGCCCCHH--------HHHHHHHHHHH
T ss_pred -----ccH------------------HHHHHHHhcc---------------cccchhhccc--------ccChhhhhccc
Confidence 000 0000000000 000000 000 00011111223
Q ss_pred cCCCcEEEEeeCCCCccChhhHHHHHHhCC----CCeEEEecCCCccccccCcHHHHHHHHHHHH
Q 012188 395 HVKCDVNVFHGEDDELIPVECSYNVQRKIP----RARVKVIEKKDHITIVVGRQKTFARELEEIW 455 (468)
Q Consensus 395 ~i~~PvLii~G~~D~~vp~~~~~~l~~~~p----~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl 455 (468)
.+++|+++++|++|.++|++.++.+.+.++ ++++++++++||..++ ++ +++.+.|.+||
T Consensus 210 ~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~-~~-~~~~~~i~~fl 272 (273)
T 1vkh_A 210 RFSIDMHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLDDLGLHNDVY-KN-GKVAKYIFDNI 272 (273)
T ss_dssp HHTCEEEEEEETTCSSCCTHHHHHHHHHHHHTTCCEEEEEECCCSGGGGG-GC-HHHHHHHHHTC
T ss_pred ccCCCEEEEecCCcCCCChHHHHHHHHHHHhcCCceEEEEeCCCcccccc-cC-hHHHHHHHHHc
Confidence 368999999999999999999998888775 4799999999999987 66 88999999886
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.87 E-value=4.5e-21 Score=191.09 Aligned_cols=230 Identities=11% Similarity=0.067 Sum_probs=135.3
Q ss_pred CCeEEEEecCCCCccchhhhh--hhccccCCCcceEEEECCCCCCCCCCCCC-CCCCHHHHHHHHHHHHhcccCC--ceE
Q 012188 181 SRDTLFVKTQGPSAFWTETLF--PNFSSASKSTYRLFAIDLLGFGRSPKPTD-SLYTVREHLDMIEKSVIEPNKV--KSF 255 (468)
Q Consensus 181 ~p~vl~lHG~g~s~~~~~~~~--~~L~~~~~~gy~Via~D~~G~G~S~~~~~-~~~t~~~~~~di~~~l~~~l~~--~~i 255 (468)
.|+||++||++++...+.... ..+. +||+|+++|+||||.|+.+.. ... ++.+++ ..+++.+.. +++
T Consensus 159 ~p~vv~~HG~~~~~~~~~~~~~~~~~~----~g~~vi~~D~~G~G~s~~~~~~~~~---~~~~d~-~~~~~~l~~~~~~v 230 (405)
T 3fnb_A 159 QDTLIVVGGGDTSREDLFYMLGYSGWE----HDYNVLMVDLPGQGKNPNQGLHFEV---DARAAI-SAILDWYQAPTEKI 230 (405)
T ss_dssp CCEEEEECCSSCCHHHHHHHTHHHHHH----TTCEEEEECCTTSTTGGGGTCCCCS---CTHHHH-HHHHHHCCCSSSCE
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHh----CCcEEEEEcCCCCcCCCCCCCCCCc---cHHHHH-HHHHHHHHhcCCCE
Confidence 389999999887665443333 3344 899999999999999964332 122 334444 344554444 799
Q ss_pred EEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHHh
Q 012188 256 HIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLI 335 (468)
Q Consensus 256 ~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (468)
+++||||||.+++.+|.++| +++++|+++|.... .......+......+.... .....+..
T Consensus 231 ~l~G~S~GG~~a~~~a~~~p-~v~~~v~~~p~~~~-------~~~~~~~~~~~~~~p~~~~-~~~~~~~~---------- 291 (405)
T 3fnb_A 231 AIAGFSGGGYFTAQAVEKDK-RIKAWIASTPIYDV-------AEVFRISFSTALKAPKTIL-KWGSKLVT---------- 291 (405)
T ss_dssp EEEEETTHHHHHHHHHTTCT-TCCEEEEESCCSCH-------HHHHHHHCC-----------------------------
T ss_pred EEEEEChhHHHHHHHHhcCc-CeEEEEEecCcCCH-------HHHHHHhhhhhhhCcHHHH-HHHHHHhh----------
Confidence 99999999999999999999 89999999987643 1111111111100000000 00000000
Q ss_pred hccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChhh
Q 012188 336 CKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVEC 415 (468)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~ 415 (468)
. ........ ...... .+.......... ...... .. ..+.++++|+|+++|++|.++|++.
T Consensus 292 -~---~~~~~~~~-----~~~~~~-~~~~~~~~~~~~---~~~~~~-~~------~~l~~i~~PvLii~G~~D~~v~~~~ 351 (405)
T 3fnb_A 292 -S---VNKVAEVN-----LNKYAW-QFGQVDFITSVN---EVLEQA-QI------VDYNKIDVPSLFLVGAGEDSELMRQ 351 (405)
T ss_dssp -C---CCHHHHHH-----HHHHHH-HHTSSSHHHHHH---HHHHHC-CC------CCGGGCCSCEEEEEETTSCHHHHHH
T ss_pred -c---cchhHHHH-----HHHhhh-hcCCCCHHHHHH---HHHHhh-cc------cCHhhCCCCEEEEecCCCcCCChHH
Confidence 0 00000000 000000 000000000000 000000 00 0046789999999999999999999
Q ss_pred HHHHHHhCC----CCeEEEe---cCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 416 SYNVQRKIP----RARVKVI---EKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 416 ~~~l~~~~p----~~~l~~i---~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
++.+.+.++ +.+++++ +++||..+. ++++.+.+.|.+||++.
T Consensus 352 ~~~l~~~l~~~~~~~~l~~~~~~~h~gh~~~~-~~~~~~~~~i~~fL~~~ 400 (405)
T 3fnb_A 352 SQVLYDNFKQRGIDVTLRKFSSESGADAHCQV-NNFRLMHYQVFEWLNHI 400 (405)
T ss_dssp HHHHHHHHHHTTCCEEEEEECTTTTCCSGGGG-GGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCCCceEEEEcCCccchhcccc-chHHHHHHHHHHHHHHH
Confidence 999988875 4579999 566677775 89999999999999874
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=99.86 E-value=9.6e-21 Score=182.42 Aligned_cols=218 Identities=12% Similarity=0.080 Sum_probs=141.2
Q ss_pred cCCCCeEEEEecC--CCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcc-cCCce
Q 012188 178 SSSSRDTLFVKTQ--GPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEP-NKVKS 254 (468)
Q Consensus 178 ~~~~p~vl~lHG~--g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~-l~~~~ 254 (468)
++++|+|||+||+ +++...|..+.+.|. .+|+|+++|+||||.|+.+. .+++++++++. ..++. .+.++
T Consensus 78 ~~~~~~lv~lhG~~~~~~~~~~~~~~~~L~----~~~~v~~~d~~G~G~~~~~~---~~~~~~~~~~~-~~l~~~~~~~~ 149 (319)
T 3lcr_A 78 GQLGPQLILVCPTVMTTGPQVYSRLAEELD----AGRRVSALVPPGFHGGQALP---ATLTVLVRSLA-DVVQAEVADGE 149 (319)
T ss_dssp CCSSCEEEEECCSSTTCSGGGGHHHHHHHC----TTSEEEEEECTTSSTTCCEE---SSHHHHHHHHH-HHHHHHHTTSC
T ss_pred CCCCCeEEEECCCCcCCCHHHHHHHHHHhC----CCceEEEeeCCCCCCCCCCC---CCHHHHHHHHH-HHHHHhcCCCC
Confidence 4567999999995 556566666888887 89999999999999876544 48999999984 55544 46689
Q ss_pred EEEEEEcccHHHHHHHHHhC---CCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHH
Q 012188 255 FHIVAHSLGCILALALAVKH---PGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTI 331 (468)
Q Consensus 255 i~lvGhS~Gg~ial~~a~~~---p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (468)
++|+||||||.+|+.+|.++ |++++++|++++........ ........ .........
T Consensus 150 ~~lvGhS~Gg~vA~~~A~~~~~~~~~v~~lvl~~~~~~~~~~~--~~~~~~~~------------------~~~~~~~~~ 209 (319)
T 3lcr_A 150 FALAGHSSGGVVAYEVARELEARGLAPRGVVLIDSYSFDGDGG--RPEELFRS------------------ALNERFVEY 209 (319)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCCCCSSCC--HHHHHHHH------------------HHHHHHHHH
T ss_pred EEEEEECHHHHHHHHHHHHHHhcCCCccEEEEECCCCCCccch--hhHHHHHH------------------HHHHHHhhh
Confidence 99999999999999999998 88999999999765432110 00000000 000000000
Q ss_pred HHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCcc
Q 012188 332 CLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELI 411 (468)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~v 411 (468)
.. +...... . .....+....... ..+ ....+++|+++|+|++ ..+
T Consensus 210 ~~-~~~~~~~---------~-----------------~~l~~~~~~~~~~----~~~---~~~~i~~PvLli~g~~-~~~ 254 (319)
T 3lcr_A 210 LR-LTGGGNL---------S-----------------QRITAQVWCLELL----RGW---RPEGLTAPTLYVRPAQ-PLV 254 (319)
T ss_dssp HH-HHCCCCH---------H-----------------HHHHHHHHHHHHT----TTC---CCCCCSSCEEEEEESS-CSS
T ss_pred hc-ccCCCch---------h-----------------HHHHHHHHHHHHH----hcC---CCCCcCCCEEEEEeCC-CCC
Confidence 00 0000000 0 0000000000000 000 0146799999999998 456
Q ss_pred ChhhHHHHHHhCCC-CeEEEecCCCcccccc-CcHHHHHHHHHHHHhhcC
Q 012188 412 PVECSYNVQRKIPR-ARVKVIEKKDHITIVV-GRQKTFARELEEIWRSSS 459 (468)
Q Consensus 412 p~~~~~~l~~~~p~-~~l~~i~~~gH~~~~~-e~p~~~~~~i~~fl~~~~ 459 (468)
++.....+.+.+++ .+++++++ +|+.+++ ++|+++++.|.+||++..
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~g-~H~~~~~~~~~~~va~~i~~fL~~~~ 303 (319)
T 3lcr_A 255 EQEKPEWRGDVLAAMGQVVEAPG-DHFTIIEGEHVASTAHIVGDWLREAH 303 (319)
T ss_dssp SCCCTHHHHHHHHTCSEEEEESS-CTTGGGSTTTHHHHHHHHHHHHHHHH
T ss_pred CcccchhhhhcCCCCceEEEeCC-CcHHhhCcccHHHHHHHHHHHHHhcc
Confidence 66667777777765 68888885 8888874 499999999999998753
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.3e-21 Score=187.45 Aligned_cols=174 Identities=16% Similarity=0.107 Sum_probs=135.2
Q ss_pred cCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH----HHhcccCCc
Q 012188 178 SSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEK----SVIEPNKVK 253 (468)
Q Consensus 178 ~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~----~l~~~l~~~ 253 (468)
.++.|+||++||++++...+..+.+.|. ++||.|+++|+||+|.|..... .++.+.++.+.. .+...++.+
T Consensus 93 ~~~~p~vv~~HG~~~~~~~~~~~~~~la---~~G~~vv~~d~~g~g~s~~~~~--~d~~~~~~~l~~~~~~~~~~~~~~~ 167 (306)
T 3vis_A 93 NNTYGAIAISPGYTGTQSSIAWLGERIA---SHGFVVIAIDTNTTLDQPDSRA--RQLNAALDYMLTDASSAVRNRIDAS 167 (306)
T ss_dssp CSCEEEEEEECCTTCCHHHHHHHHHHHH---TTTEEEEEECCSSTTCCHHHHH--HHHHHHHHHHHHTSCHHHHTTEEEE
T ss_pred CCCCCEEEEeCCCcCCHHHHHHHHHHHH---hCCCEEEEecCCCCCCCcchHH--HHHHHHHHHHHhhcchhhhccCCcc
Confidence 3446789999999987776666777776 5799999999999999853221 122222232211 122335567
Q ss_pred eEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHH
Q 012188 254 SFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICL 333 (468)
Q Consensus 254 ~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (468)
+++++||||||.+++.++.++|+ ++++|+++|....
T Consensus 168 ~v~l~G~S~GG~~a~~~a~~~p~-v~~~v~~~~~~~~------------------------------------------- 203 (306)
T 3vis_A 168 RLAVMGHSMGGGGTLRLASQRPD-LKAAIPLTPWHLN------------------------------------------- 203 (306)
T ss_dssp EEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCSC-------------------------------------------
T ss_pred cEEEEEEChhHHHHHHHHhhCCC-eeEEEEeccccCc-------------------------------------------
Confidence 99999999999999999999997 9999999875421
Q ss_pred HhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccCh
Q 012188 334 LICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPV 413 (468)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~ 413 (468)
..+.++++|+++++|++|.++|.
T Consensus 204 ---------------------------------------------------------~~~~~~~~P~lii~G~~D~~~~~ 226 (306)
T 3vis_A 204 ---------------------------------------------------------KSWRDITVPTLIIGAEYDTIASV 226 (306)
T ss_dssp ---------------------------------------------------------CCCTTCCSCEEEEEETTCSSSCT
T ss_pred ---------------------------------------------------------cccccCCCCEEEEecCCCcccCc
Confidence 00145689999999999999999
Q ss_pred h-hHHHHHHhCCC---CeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 414 E-CSYNVQRKIPR---ARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 414 ~-~~~~l~~~~p~---~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
+ ..+.+.+.+++ .++++++++||+.+. +.++++.+.+.+||++.
T Consensus 227 ~~~~~~~~~~l~~~~~~~~~~~~g~gH~~~~-~~~~~~~~~i~~fl~~~ 274 (306)
T 3vis_A 227 TLHSKPFYNSIPSPTDKAYLELDGASHFAPN-ITNKTIGMYSVAWLKRF 274 (306)
T ss_dssp TTTHHHHHHTCCTTSCEEEEEETTCCTTGGG-SCCHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHhccCCCceEEEECCCCccchh-hchhHHHHHHHHHHHHH
Confidence 8 69999999875 469999999999997 88899999999999874
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.7e-21 Score=181.87 Aligned_cols=200 Identities=11% Similarity=0.025 Sum_probs=138.8
Q ss_pred CCCceeEEEec---CCCCeEEEEecCC---CCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHH
Q 012188 168 DCDCKFCTCWS---SSSRDTLFVKTQG---PSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDM 241 (468)
Q Consensus 168 d~~~~~~~~~~---~~~p~vl~lHG~g---~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~d 241 (468)
++..+.++.|. +++|+|||+||++ ++...+..+.+.|. +.||+|+++|+||+|. .++.+++++
T Consensus 47 ~~~~~~~~~~~p~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~---~~G~~v~~~d~~~~~~--------~~~~~~~~d 115 (262)
T 2pbl_A 47 EGDRHKFDLFLPEGTPVGLFVFVHGGYWMAFDKSSWSHLAVGAL---SKGWAVAMPSYELCPE--------VRISEITQQ 115 (262)
T ss_dssp SSTTCEEEEECCSSSCSEEEEEECCSTTTSCCGGGCGGGGHHHH---HTTEEEEEECCCCTTT--------SCHHHHHHH
T ss_pred CCCCceEEEEccCCCCCCEEEEEcCcccccCChHHHHHHHHHHH---hCCCEEEEeCCCCCCC--------CChHHHHHH
Confidence 44455555552 3468899999954 44444445666665 4799999999999864 357777777
Q ss_pred HHHHHhcccCC---ceEEEEEEcccHHHHHHHHHhC------CCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCc
Q 012188 242 IEKSVIEPNKV---KSFHIVAHSLGCILALALAVKH------PGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWP 312 (468)
Q Consensus 242 i~~~l~~~l~~---~~i~lvGhS~Gg~ial~~a~~~------p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (468)
+ ..+++.+.. ++++++||||||.+++.++.++ |++++++|+++|.....+...
T Consensus 116 ~-~~~~~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~~~~~~----------------- 177 (262)
T 2pbl_A 116 I-SQAVTAAAKEIDGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLR----------------- 177 (262)
T ss_dssp H-HHHHHHHHHHSCSCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGG-----------------
T ss_pred H-HHHHHHHHHhccCCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCccCchHHHh-----------------
Confidence 7 455544332 6999999999999999999998 899999999998654311000
Q ss_pred hhhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHh
Q 012188 313 LIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAV 392 (468)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (468)
...... + .. ....... ......
T Consensus 178 -----~~~~~~---~--------~~------------~~~~~~~------------------------------~~~~~~ 199 (262)
T 2pbl_A 178 -----TSMNEK---F--------KM------------DADAAIA------------------------------ESPVEM 199 (262)
T ss_dssp -----STTHHH---H--------CC------------CHHHHHH------------------------------TCGGGC
T ss_pred -----hhhhhh---h--------CC------------CHHHHHh------------------------------cCcccc
Confidence 000000 0 00 0000000 000011
Q ss_pred hccCCCcEEEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHh
Q 012188 393 RNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWR 456 (468)
Q Consensus 393 ~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~ 456 (468)
...+++|+++++|++|.++|.+.++.+.+.++ +++++++++||+.+. ++++.....+.+++-
T Consensus 200 ~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~H~~~~-~~~~~~~~~l~~~l~ 261 (262)
T 2pbl_A 200 QNRYDAKVTVWVGGAERPAFLDQAIWLVEAWD-ADHVIAFEKHHFNVI-EPLADPESDLVAVIT 261 (262)
T ss_dssp CCCCSCEEEEEEETTSCHHHHHHHHHHHHHHT-CEEEEETTCCTTTTT-GGGGCTTCHHHHHHH
T ss_pred cCCCCCCEEEEEeCCCCcccHHHHHHHHHHhC-CeEEEeCCCCcchHH-hhcCCCCcHHHHHHh
Confidence 24678999999999999999999999999998 999999999999997 888888887777763
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.7e-21 Score=180.57 Aligned_cols=172 Identities=13% Similarity=0.128 Sum_probs=128.9
Q ss_pred CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEE--CCCCCCCCCCCCC---CCCCHHHH---HHHHH---HHHhc
Q 012188 180 SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAI--DLLGFGRSPKPTD---SLYTVREH---LDMIE---KSVIE 248 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~--D~~G~G~S~~~~~---~~~t~~~~---~~di~---~~l~~ 248 (468)
++|+||++||++++...+..+.+.|+ ++|.|+++ |++|+|.|..... ..++..++ ++++. ..+.+
T Consensus 61 ~~p~vv~~HG~~~~~~~~~~~~~~l~----~~~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 136 (251)
T 2r8b_A 61 GAPLFVLLHGTGGDENQFFDFGARLL----PQATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADFIKANRE 136 (251)
T ss_dssp TSCEEEEECCTTCCHHHHHHHHHHHS----TTSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEeCCCCCHhHHHHHHHhcC----CCceEEEecCCcCCCCCcccccCCCCCcCCHHHHHHHHHHHHHHHHHHHh
Confidence 57899999999988777767788777 67999999 8999998853211 12333333 34431 23334
Q ss_pred ccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHh
Q 012188 249 PNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHIS 328 (468)
Q Consensus 249 ~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (468)
+++.++++++||||||.+++.+|.++|++++++|+++|......
T Consensus 137 ~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~------------------------------------ 180 (251)
T 2r8b_A 137 HYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP------------------------------------ 180 (251)
T ss_dssp HHTCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC------------------------------------
T ss_pred ccCCCcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCccc------------------------------------
Confidence 44778999999999999999999999999999999998753310
Q ss_pred hHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCC
Q 012188 329 RTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDD 408 (468)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D 408 (468)
. .....+++|+++++|++|
T Consensus 181 -------------------------------~------------------------------~~~~~~~~P~li~~g~~D 199 (251)
T 2r8b_A 181 -------------------------------K------------------------------ISPAKPTRRVLITAGERD 199 (251)
T ss_dssp -------------------------------C------------------------------CCCCCTTCEEEEEEETTC
T ss_pred -------------------------------c------------------------------ccccccCCcEEEeccCCC
Confidence 0 001245799999999999
Q ss_pred CccChhhHHHHHHhCC--CCeEE-EecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 409 ELIPVECSYNVQRKIP--RARVK-VIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 409 ~~vp~~~~~~l~~~~p--~~~l~-~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
.++|.+.++.+.+.++ +.++. +++++||..+. +.++. +.+||++
T Consensus 200 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~gH~~~~-~~~~~----~~~~l~~ 246 (251)
T 2r8b_A 200 PICPVQLTKALEESLKAQGGTVETVWHPGGHEIRS-GEIDA----VRGFLAA 246 (251)
T ss_dssp TTSCHHHHHHHHHHHHHHSSEEEEEEESSCSSCCH-HHHHH----HHHHHGG
T ss_pred ccCCHHHHHHHHHHHHHcCCeEEEEecCCCCccCH-HHHHH----HHHHHHH
Confidence 9999999999999887 67766 78889999875 55544 4555544
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 | Back alignment and structure |
|---|
Probab=99.86 E-value=8.7e-21 Score=187.78 Aligned_cols=219 Identities=11% Similarity=0.012 Sum_probs=146.8
Q ss_pred CCCceeEEEecC----CCCeEEEEecCCCCcc-chhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHH
Q 012188 168 DCDCKFCTCWSS----SSRDTLFVKTQGPSAF-WTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMI 242 (468)
Q Consensus 168 d~~~~~~~~~~~----~~p~vl~lHG~g~s~~-~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di 242 (468)
||..+.++.+.+ +.|+||++||++++.. |+. ....|. ++||.|+++|+||+|.|.......+++.+++.++
T Consensus 135 dg~~i~~~l~~p~~~~~~P~vl~~hG~~~~~~~~~~-~~~~l~---~~G~~v~~~d~rG~G~s~~~~~~~~~~~~~~~~~ 210 (386)
T 2jbw_A 135 DGIPMPVYVRIPEGPGPHPAVIMLGGLESTKEESFQ-MENLVL---DRGMATATFDGPGQGEMFEYKRIAGDYEKYTSAV 210 (386)
T ss_dssp TTEEEEEEEECCSSSCCEEEEEEECCSSCCTTTTHH-HHHHHH---HTTCEEEEECCTTSGGGTTTCCSCSCHHHHHHHH
T ss_pred CCEEEEEEEEcCCCCCCCCEEEEeCCCCccHHHHHH-HHHHHH---hCCCEEEEECCCCCCCCCCCCCCCccHHHHHHHH
Confidence 666666666632 3478899999887654 443 344443 4899999999999999943333457888888888
Q ss_pred HHHHhcc---cCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhh
Q 012188 243 EKSVIEP---NKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGAS 319 (468)
Q Consensus 243 ~~~l~~~---l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (468)
. .++.. ++.++++++|||+||++++.++.+ |++++++|++ |......... ..+ ..
T Consensus 211 ~-~~l~~~~~~~~~~i~l~G~S~GG~la~~~a~~-~~~~~a~v~~-~~~~~~~~~~--------------~~~-----~~ 268 (386)
T 2jbw_A 211 V-DLLTKLEAIRNDAIGVLGRSLGGNYALKSAAC-EPRLAACISW-GGFSDLDYWD--------------LET-----PL 268 (386)
T ss_dssp H-HHHHHCTTEEEEEEEEEEETHHHHHHHHHHHH-CTTCCEEEEE-SCCSCSTTGG--------------GSC-----HH
T ss_pred H-HHHHhCCCcCcccEEEEEEChHHHHHHHHHcC-CcceeEEEEe-ccCChHHHHH--------------hcc-----HH
Confidence 4 55554 455799999999999999999999 8899999999 7654311110 000 00
Q ss_pred hHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCc
Q 012188 320 MACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCD 399 (468)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 399 (468)
. . ......+.. ....+ .....+.. ......+.++++|
T Consensus 269 ~----~---~~~~~~~g~-~~~~~-----------------------------~~~~~~~~------~~~~~~~~~i~~P 305 (386)
T 2jbw_A 269 T----K---ESWKYVSKV-DTLEE-----------------------------ARLHVHAA------LETRDVLSQIACP 305 (386)
T ss_dssp H----H---HHHHHHTTC-SSHHH-----------------------------HHHHHHHH------TCCTTTGGGCCSC
T ss_pred H----H---HHHHHHhCC-CCHHH-----------------------------HHHHHHHh------CChhhhhcccCCC
Confidence 0 0 000000000 00000 00000000 0011224677899
Q ss_pred EEEEeeCCCCccChhhHHHHHHhC-C-CCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 400 VNVFHGEDDELIPVECSYNVQRKI-P-RARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 400 vLii~G~~D~~vp~~~~~~l~~~~-p-~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
+|+++|++|. +|++.++.+.+.+ + ++++++++++||... ++++++.+.|.+||++.
T Consensus 306 ~Lii~G~~D~-v~~~~~~~l~~~l~~~~~~~~~~~~~gH~~~--~~~~~~~~~i~~fl~~~ 363 (386)
T 2jbw_A 306 TYILHGVHDE-VPLSFVDTVLELVPAEHLNLVVEKDGDHCCH--NLGIRPRLEMADWLYDV 363 (386)
T ss_dssp EEEEEETTSS-SCTHHHHHHHHHSCGGGEEEEEETTCCGGGG--GGTTHHHHHHHHHHHHH
T ss_pred EEEEECCCCC-CCHHHHHHHHHHhcCCCcEEEEeCCCCcCCc--cchHHHHHHHHHHHHHh
Confidence 9999999999 9999999999999 7 789999999999753 78899999999999864
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.86 E-value=5.1e-21 Score=175.74 Aligned_cols=183 Identities=13% Similarity=0.038 Sum_probs=132.3
Q ss_pred CCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCC----------CCCHHHHHHHHHHHHhccc
Q 012188 181 SRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDS----------LYTVREHLDMIEKSVIEPN 250 (468)
Q Consensus 181 ~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~----------~~t~~~~~~di~~~l~~~l 250 (468)
.|+||++||+++....+..+...|+ ++||.|+++|++|+|.+...... ..+..+.++|+ ..+++.+
T Consensus 32 ~p~vv~~HG~~g~~~~~~~~~~~l~---~~G~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~l 107 (241)
T 3f67_A 32 LPIVIVVQEIFGVHEHIRDLCRRLA---QEGYLAIAPELYFRQGDPNEYHDIPTLFKELVSKVPDAQVLADL-DHVASWA 107 (241)
T ss_dssp EEEEEEECCTTCSCHHHHHHHHHHH---HTTCEEEEECTTTTTCCGGGCCSHHHHHHHTGGGSCHHHHHHHH-HHHHHHH
T ss_pred CCEEEEEcCcCccCHHHHHHHHHHH---HCCcEEEEecccccCCCCCchhhHHHHHHHhhhcCCchhhHHHH-HHHHHHH
Confidence 4789999998887766666777775 58999999999999877543321 12334556666 3444332
Q ss_pred ---C--CceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHH
Q 012188 251 ---K--VKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYE 325 (468)
Q Consensus 251 ---~--~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (468)
+ .++++++||||||.+++.++.++|+ +.+++++.+........ +
T Consensus 108 ~~~~~d~~~i~l~G~S~Gg~~a~~~a~~~~~-~~~~v~~~~~~~~~~~~----------------~-------------- 156 (241)
T 3f67_A 108 ARHGGDAHRLLITGFCWGGRITWLYAAHNPQ-LKAAVAWYGKLVGEKSL----------------N-------------- 156 (241)
T ss_dssp HTTTEEEEEEEEEEETHHHHHHHHHHTTCTT-CCEEEEESCCCSCCCCS----------------S--------------
T ss_pred HhccCCCCeEEEEEEcccHHHHHHHHhhCcC-cceEEEEeccccCCCcc----------------C--------------
Confidence 2 4689999999999999999999997 77777766554321110 0
Q ss_pred HHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEee
Q 012188 326 HISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHG 405 (468)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G 405 (468)
........+.++++|+++++|
T Consensus 157 -----------------------------------------------------------~~~~~~~~~~~~~~P~l~~~g 177 (241)
T 3f67_A 157 -----------------------------------------------------------SPKHPVDIAVDLNAPVLGLYG 177 (241)
T ss_dssp -----------------------------------------------------------SCCCHHHHGGGCCSCEEEEEE
T ss_pred -----------------------------------------------------------CccCHHHhhhhcCCCEEEEEe
Confidence 000011123567899999999
Q ss_pred CCCCccChhhHHHHHHhC----CCCeEEEecCCCccccc-------cCcHHHHHHHHHHHHhh
Q 012188 406 EDDELIPVECSYNVQRKI----PRARVKVIEKKDHITIV-------VGRQKTFARELEEIWRS 457 (468)
Q Consensus 406 ~~D~~vp~~~~~~l~~~~----p~~~l~~i~~~gH~~~~-------~e~p~~~~~~i~~fl~~ 457 (468)
++|.++|++.++.+.+.+ ++++++++++++|.... .+..++..+.+.+||++
T Consensus 178 ~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 240 (241)
T 3f67_A 178 AKDASIPQDTVETMRQALRAANATAEIVVYPEADHAFNADYRASYHEESAKDGWQRMLAWFAQ 240 (241)
T ss_dssp TTCTTSCHHHHHHHHHHHHHTTCSEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHTT
T ss_pred cCCCCCCHHHHHHHHHHHHHcCCCcEEEEECCCCcceecCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 999999999988888876 67899999999998763 13346788899999965
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.86 E-value=3e-21 Score=175.84 Aligned_cols=181 Identities=13% Similarity=0.107 Sum_probs=132.3
Q ss_pred CceeEEEecC--CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEE--CCCCCCCCCCCC---CCCCCHHHHHHHH
Q 012188 170 DCKFCTCWSS--SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAI--DLLGFGRSPKPT---DSLYTVREHLDMI 242 (468)
Q Consensus 170 ~~~~~~~~~~--~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~--D~~G~G~S~~~~---~~~~t~~~~~~di 242 (468)
..+.++..+. +.|+||++||++++...+..+...|. +||.|+++ |++|+|.|.... ...++..++.+++
T Consensus 25 ~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~----~g~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~ 100 (226)
T 2h1i_A 25 MMKHVFQKGKDTSKPVLLLLHGTGGNELDLLPLAEIVD----SEASVLSVRGNVLENGMPRFFRRLAEGIFDEEDLIFRT 100 (226)
T ss_dssp SSCEEEECCSCTTSCEEEEECCTTCCTTTTHHHHHHHH----TTSCEEEECCSEEETTEEESSCEEETTEECHHHHHHHH
T ss_pred ceeEEecCCCCCCCcEEEEEecCCCChhHHHHHHHHhc----cCceEEEecCcccCCcchhhccccCccCcChhhHHHHH
Confidence 3455666654 67899999999987776666788887 69999999 999999885322 1223454444333
Q ss_pred ---H---HHHhccc--CCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchh
Q 012188 243 ---E---KSVIEPN--KVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLI 314 (468)
Q Consensus 243 ---~---~~l~~~l--~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (468)
. ..+.+.. +.++++++||||||.+++.++.++|++++++|+++|.......
T Consensus 101 ~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~--------------------- 159 (226)
T 2h1i_A 101 KELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRGM--------------------- 159 (226)
T ss_dssp HHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSSC---------------------
T ss_pred HHHHHHHHHHHhhcCCCcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCCCCCcCcc---------------------
Confidence 1 2233455 4479999999999999999999999999999999987533100
Q ss_pred hhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhc
Q 012188 315 AFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRN 394 (468)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (468)
....
T Consensus 160 ----------------------------------------------------------------------------~~~~ 163 (226)
T 2h1i_A 160 ----------------------------------------------------------------------------QLAN 163 (226)
T ss_dssp ----------------------------------------------------------------------------CCCC
T ss_pred ----------------------------------------------------------------------------cccc
Confidence 0012
Q ss_pred cCCCcEEEEeeCCCCccChhhHHHHHHhCCC----CeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 395 HVKCDVNVFHGEDDELIPVECSYNVQRKIPR----ARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 395 ~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~----~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
.+++|+++++|++|.++|.+.++.+.+.+++ .++ +++++||.... +. .+.+.+||++
T Consensus 164 ~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~gH~~~~-~~----~~~~~~~l~~ 224 (226)
T 2h1i_A 164 LAGKSVFIAAGTNDPICSSAESEELKVLLENANANVTM-HWENRGHQLTM-GE----VEKAKEWYDK 224 (226)
T ss_dssp CTTCEEEEEEESSCSSSCHHHHHHHHHHHHTTTCEEEE-EEESSTTSCCH-HH----HHHHHHHHHH
T ss_pred ccCCcEEEEeCCCCCcCCHHHHHHHHHHHHhcCCeEEE-EeCCCCCCCCH-HH----HHHHHHHHHH
Confidence 3479999999999999999999999888863 345 99999999864 44 4555556543
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=4.3e-21 Score=173.40 Aligned_cols=178 Identities=12% Similarity=0.124 Sum_probs=133.3
Q ss_pred cCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCC-------------------CCCCCCCCCCCCCCHHHH
Q 012188 178 SSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLL-------------------GFGRSPKPTDSLYTVREH 238 (468)
Q Consensus 178 ~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~-------------------G~G~S~~~~~~~~t~~~~ 238 (468)
.+++|+||++||++++...+..+.+.|.+ ..+||+|+++|+| |+|.+... ..+++++.
T Consensus 11 ~~~~~~vv~~HG~~~~~~~~~~~~~~l~~-~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~--~~~~~~~~ 87 (218)
T 1auo_A 11 KPADACVIWLHGLGADRYDFMPVAEALQE-SLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSI--SLEELEVS 87 (218)
T ss_dssp SCCSEEEEEECCTTCCTTTTHHHHHHHHT-TCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEE--CHHHHHHH
T ss_pred CCCCcEEEEEecCCCChhhHHHHHHHHhh-cCCceEEEeCCCCCccccCCCCCcccceecCcCCCccccc--chHHHHHH
Confidence 34578999999998877666667777762 1179999998766 45543221 23567778
Q ss_pred HHHHHHHHhccc---CC--ceEEEEEEcccHHHHHHHHH-hCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCc
Q 012188 239 LDMIEKSVIEPN---KV--KSFHIVAHSLGCILALALAV-KHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWP 312 (468)
Q Consensus 239 ~~di~~~l~~~l---~~--~~i~lvGhS~Gg~ial~~a~-~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (468)
++++ ..+++.+ +. ++++++|||+||.+++.++. ++|++++++|+++|.... .. ++
T Consensus 88 ~~~~-~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~--~~----------------~~ 148 (218)
T 1auo_A 88 AKMV-TDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPT--FG----------------DE 148 (218)
T ss_dssp HHHH-HHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTT--CC----------------TT
T ss_pred HHHH-HHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCC--ch----------------hh
Confidence 8888 5666665 44 49999999999999999999 999999999999986532 00 00
Q ss_pred hhhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHh
Q 012188 313 LIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAV 392 (468)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (468)
. .+ .
T Consensus 149 ~-----------------------------------------------~~-----------------------~------ 152 (218)
T 1auo_A 149 L-----------------------------------------------EL-----------------------S------ 152 (218)
T ss_dssp C-----------------------------------------------CC-----------------------C------
T ss_pred h-----------------------------------------------hh-----------------------h------
Confidence 0 00 0
Q ss_pred hccCCCcEEEEeeCCCCccChhhHHHHHHhCCC----CeEEEecCCCccccccCcHHHHHHHHHHHH
Q 012188 393 RNHVKCDVNVFHGEDDELIPVECSYNVQRKIPR----ARVKVIEKKDHITIVVGRQKTFARELEEIW 455 (468)
Q Consensus 393 ~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~----~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl 455 (468)
...+++|+++++|++|.++|++.++.+.+.+++ .++++++ +||..+. +.++++.+.+.++|
T Consensus 153 ~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~~-~~~~~~~~~l~~~l 217 (218)
T 1auo_A 153 ASQQRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYP-MGHEVLP-QEIHDIGAWLAARL 217 (218)
T ss_dssp HHHHTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEES-CSSSCCH-HHHHHHHHHHHHHH
T ss_pred hcccCCCEEEEEeCCCceecHHHHHHHHHHHHhCCCceEEEEec-CCCccCH-HHHHHHHHHHHHHh
Confidence 023478999999999999999999999888864 8999999 9999886 67777666666665
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.85 E-value=3e-21 Score=181.52 Aligned_cols=202 Identities=11% Similarity=0.040 Sum_probs=132.9
Q ss_pred CCCeEEEEecCC---CCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcc-----cC
Q 012188 180 SSRDTLFVKTQG---PSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEP-----NK 251 (468)
Q Consensus 180 ~~p~vl~lHG~g---~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~-----l~ 251 (468)
+.|+||++||++ ++...+..+...|. ++||.|+++|+||+|.|...........+..+.+ ..+.+. ++
T Consensus 42 ~~p~vv~~HGgg~~~~~~~~~~~~~~~l~---~~G~~v~~~d~~g~g~s~~~~~~~~~~~d~~~~~-~~l~~~~~~~~~~ 117 (276)
T 3hxk_A 42 TFPAIIICPGGGYQHISQRESDPLALAFL---AQGYQVLLLNYTVMNKGTNYNFLSQNLEEVQAVF-SLIHQNHKEWQIN 117 (276)
T ss_dssp CBCEEEEECCSTTTSCCGGGSHHHHHHHH---HTTCEEEEEECCCTTSCCCSCTHHHHHHHHHHHH-HHHHHHTTTTTBC
T ss_pred CCCEEEEEcCCccccCCchhhHHHHHHHH---HCCCEEEEecCccCCCcCCCCcCchHHHHHHHHH-HHHHHhHHHcCCC
Confidence 458999999955 23334444556665 4899999999999999864332111222332233 233332 23
Q ss_pred CceEEEEEEcccHHHHHHHHHh-CCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhH
Q 012188 252 VKSFHIVAHSLGCILALALAVK-HPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRT 330 (468)
Q Consensus 252 ~~~i~lvGhS~Gg~ial~~a~~-~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (468)
.++++++||||||.+++.++.+ ++.+++++|+++|......... ....+.
T Consensus 118 ~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~~~~~~-----------~~~~~~------------------ 168 (276)
T 3hxk_A 118 PEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFTFGWP-----------SDLSHF------------------ 168 (276)
T ss_dssp TTCCEEEEEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBTTSSCS-----------SSSSSS------------------
T ss_pred cceEEEEEeCHHHHHHHHHHhhccCCCccEEEEecCcccHHhhCC-----------cchhhh------------------
Confidence 4699999999999999999998 8899999999998764311100 000000
Q ss_pred HHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCc
Q 012188 331 ICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDEL 410 (468)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~ 410 (468)
.+..... ........+.++++|+++++|++|.+
T Consensus 169 ------------------------------~~~~~~~-----------------~~~~~~~~~~~~~~P~lii~G~~D~~ 201 (276)
T 3hxk_A 169 ------------------------------NFEIENI-----------------SEYNISEKVTSSTPPTFIWHTADDEG 201 (276)
T ss_dssp ------------------------------CCCCSCC-----------------GGGBTTTTCCTTSCCEEEEEETTCSS
T ss_pred ------------------------------hcCchhh-----------------hhCChhhccccCCCCEEEEecCCCce
Confidence 0000000 00001111246689999999999999
Q ss_pred cChhhHHHHHHhCC----CCeEEEecCCCccccccCcH-------------HHHHHHHHHHHhhcCCCC
Q 012188 411 IPVECSYNVQRKIP----RARVKVIEKKDHITIVVGRQ-------------KTFARELEEIWRSSSGHE 462 (468)
Q Consensus 411 vp~~~~~~l~~~~p----~~~l~~i~~~gH~~~~~e~p-------------~~~~~~i~~fl~~~~~~~ 462 (468)
+|++.++.+.+.++ ++++++++++||.... ..+ +++.+.+.+||++.....
T Consensus 202 vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~ 269 (276)
T 3hxk_A 202 VPIYNSLKYCDRLSKHQVPFEAHFFESGPHGVSL-ANRTTAPSDAYCLPSVHRWVSWASDWLERQIKNL 269 (276)
T ss_dssp SCTHHHHHHHHHHHTTTCCEEEEEESCCCTTCTT-CSTTSCSSSTTCCHHHHTHHHHHHHHHHHHHHTT
T ss_pred eChHHHHHHHHHHHHcCCCeEEEEECCCCCCccc-cCccccccccccCchHHHHHHHHHHHHHhCcccc
Confidence 99999988888764 3599999999997765 333 788999999998865433
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=7.5e-21 Score=173.34 Aligned_cols=175 Identities=10% Similarity=0.133 Sum_probs=131.2
Q ss_pred cCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCC-------------------CCCCCCCCCCCCCCHHHH
Q 012188 178 SSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLL-------------------GFGRSPKPTDSLYTVREH 238 (468)
Q Consensus 178 ~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~-------------------G~G~S~~~~~~~~t~~~~ 238 (468)
.+++|+||++||++++...+..+.+.|.. ...||+|+++|+| |+|.+... ..+++.+.
T Consensus 21 ~~~~~~vv~lHG~~~~~~~~~~~~~~l~~-~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~--~~~~~~~~ 97 (226)
T 3cn9_A 21 PNADACIIWLHGLGADRTDFKPVAEALQM-VLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPARAI--DEDQLNAS 97 (226)
T ss_dssp TTCCEEEEEECCTTCCGGGGHHHHHHHHH-HCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSSTTCB--CHHHHHHH
T ss_pred CCCCCEEEEEecCCCChHHHHHHHHHHhh-cCCCcEEEeecCCCCccccCCCCccccccccccccccccc--cchhHHHH
Confidence 44578999999999877766667777762 1179999998776 66644221 24567888
Q ss_pred HHHHHHHHhccc---CC--ceEEEEEEcccHHHHHHHHH-hCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCc
Q 012188 239 LDMIEKSVIEPN---KV--KSFHIVAHSLGCILALALAV-KHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWP 312 (468)
Q Consensus 239 ~~di~~~l~~~l---~~--~~i~lvGhS~Gg~ial~~a~-~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (468)
++++ ..+++.+ +. ++++++||||||.+++.+|. ++|++++++|+++|.......
T Consensus 98 ~~~~-~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~~------------------- 157 (226)
T 3cn9_A 98 ADQV-IALIDEQRAKGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDD------------------- 157 (226)
T ss_dssp HHHH-HHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGGGGG-------------------
T ss_pred HHHH-HHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCCchh-------------------
Confidence 8888 5777665 54 59999999999999999999 999999999999975421000
Q ss_pred hhhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHh
Q 012188 313 LIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAV 392 (468)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (468)
. .+ .
T Consensus 158 -----------------------------------------~------~~-----------------------~------ 161 (226)
T 3cn9_A 158 -----------------------------------------L------AL-----------------------D------ 161 (226)
T ss_dssp -----------------------------------------C------CC-----------------------C------
T ss_pred -----------------------------------------h------hh-----------------------c------
Confidence 0 00 0
Q ss_pred hccCCCcEEEEeeCCCCccChhhHHHHHHhCC----CCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 393 RNHVKCDVNVFHGEDDELIPVECSYNVQRKIP----RARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 393 ~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p----~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
...+++|+++++|++|.++|++.++.+.+.++ ++++++++ +||..+. +.++ .+.+||++
T Consensus 162 ~~~~~~P~lii~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~~-~~~~----~i~~~l~~ 224 (226)
T 3cn9_A 162 ERHKRIPVLHLHGSQDDVVDPALGRAAHDALQAQGVEVGWHDYP-MGHEVSL-EEIH----DIGAWLRK 224 (226)
T ss_dssp TGGGGCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEES-CCSSCCH-HHHH----HHHHHHHH
T ss_pred ccccCCCEEEEecCCCCccCHHHHHHHHHHHHHcCCceeEEEec-CCCCcch-hhHH----HHHHHHHh
Confidence 03457899999999999999999999988886 58999999 9999875 5544 45556543
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.4e-19 Score=177.08 Aligned_cols=104 Identities=9% Similarity=-0.045 Sum_probs=77.5
Q ss_pred CCCeEEEEecCCCCccch-hhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHH---HHHhccc--CCc
Q 012188 180 SSRDTLFVKTQGPSAFWT-ETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIE---KSVIEPN--KVK 253 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~-~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~---~~l~~~l--~~~ 253 (468)
+.|+||++||++++...+ ..+.+.|. ++||.|+++|+||+|.|........+....++|+. +.+.+.. +.+
T Consensus 95 ~~p~vv~~hG~~~~~~~~~~~~~~~l~---~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~ 171 (367)
T 2hdw_A 95 RLPAIVIGGPFGAVKEQSSGLYAQTMA---ERGFVTLAFDPSYTGESGGQPRNVASPDINTEDFSAAVDFISLLPEVNRE 171 (367)
T ss_dssp CEEEEEEECCTTCCTTSHHHHHHHHHH---HTTCEEEEECCTTSTTSCCSSSSCCCHHHHHHHHHHHHHHHHHCTTEEEE
T ss_pred CCCEEEEECCCCCcchhhHHHHHHHHH---HCCCEEEEECCCCcCCCCCcCccccchhhHHHHHHHHHHHHHhCcCCCcC
Confidence 347899999988765533 33566665 47999999999999999765543334555555552 2333332 346
Q ss_pred eEEEEEEcccHHHHHHHHHhCCCccceEEEecCC
Q 012188 254 SFHIVAHSLGCILALALAVKHPGSVKSLTLLAPP 287 (468)
Q Consensus 254 ~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~ 287 (468)
+++++|||+||.+++.+|.++| +++++|+++|.
T Consensus 172 ~~~l~G~S~Gg~~a~~~a~~~p-~~~~~v~~~p~ 204 (367)
T 2hdw_A 172 RIGVIGICGWGGMALNAVAVDK-RVKAVVTSTMY 204 (367)
T ss_dssp EEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCC
T ss_pred cEEEEEECHHHHHHHHHHhcCC-CccEEEEeccc
Confidence 8999999999999999999999 69999999864
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=4.3e-20 Score=173.68 Aligned_cols=198 Identities=7% Similarity=-0.030 Sum_probs=125.6
Q ss_pred CCCeEEEEecC---CCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcc---cC--
Q 012188 180 SSRDTLFVKTQ---GPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEP---NK-- 251 (468)
Q Consensus 180 ~~p~vl~lHG~---g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~---l~-- 251 (468)
+.|+||++||+ +++...+..+.+.|+ +.||.|+++|+||||.++. .......+..+.+ ..+.+. ++
T Consensus 34 ~~p~vv~~HGgg~~~~~~~~~~~~~~~l~---~~G~~v~~~d~~g~g~~~~--~~~~~~~d~~~~~-~~l~~~~~~~~~~ 107 (277)
T 3bxp_A 34 DYPIMIICPGGGFTYHSGREEAPIATRMM---AAGMHTVVLNYQLIVGDQS--VYPWALQQLGATI-DWITTQASAHHVD 107 (277)
T ss_dssp CEEEEEEECCSTTTSCCCTTHHHHHHHHH---HTTCEEEEEECCCSTTTCC--CTTHHHHHHHHHH-HHHHHHHHHHTEE
T ss_pred CccEEEEECCCccccCCCccchHHHHHHH---HCCCEEEEEecccCCCCCc--cCchHHHHHHHHH-HHHHhhhhhcCCC
Confidence 35789999994 344444445666665 4799999999999995543 2223344444444 344433 23
Q ss_pred CceEEEEEEcccHHHHHHHHHhC--------------CCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhh
Q 012188 252 VKSFHIVAHSLGCILALALAVKH--------------PGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFG 317 (468)
Q Consensus 252 ~~~i~lvGhS~Gg~ial~~a~~~--------------p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (468)
.++++++||||||.+|+.++.++ |.+++++|+++|........ ...
T Consensus 108 ~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~~~-----------------~~~--- 167 (277)
T 3bxp_A 108 CQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAIILGYPVIDLTAGF-----------------PTT--- 167 (277)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSEEEEESCCCBTTSSS-----------------SSS---
T ss_pred hhheEEEEeCHHHHHHHHHHhhccCcccccccCcccccCCcCEEEEeCCcccCCCCC-----------------CCc---
Confidence 35899999999999999999986 77899999999875421110 000
Q ss_pred hhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCC
Q 012188 318 ASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVK 397 (468)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 397 (468)
..+.. .++ ... . .........++.
T Consensus 168 ---~~~~~------------------------------~~~-~~~--------------------~--~~~~~~~~~~~~ 191 (277)
T 3bxp_A 168 ---SAARN------------------------------QIT-TDA--------------------R--LWAAQRLVTPAS 191 (277)
T ss_dssp ---HHHHH------------------------------HHC-SCG--------------------G--GSBGGGGCCTTS
T ss_pred ---cccch------------------------------hcc-chh--------------------h--hcCHhhccccCC
Confidence 00000 000 000 0 000111124557
Q ss_pred CcEEEEeeCCCCccChhhHHHHHHhCC----CCeEEEecCCCccccccC--------------cHHHHHHHHHHHHhhcC
Q 012188 398 CDVNVFHGEDDELIPVECSYNVQRKIP----RARVKVIEKKDHITIVVG--------------RQKTFARELEEIWRSSS 459 (468)
Q Consensus 398 ~PvLii~G~~D~~vp~~~~~~l~~~~p----~~~l~~i~~~gH~~~~~e--------------~p~~~~~~i~~fl~~~~ 459 (468)
+|+|+++|++|.++|++.++.+.+.++ +++++++++++|.....+ .++++.+.+.+||++..
T Consensus 192 ~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 271 (277)
T 3bxp_A 192 KPAFVWQTATDESVPPINSLKYVQAMLQHQVATAYHLFGSGIHGLALANHVTQKPGKDKYLNDQAAIWPQLALRWLQEQG 271 (277)
T ss_dssp CCEEEEECTTCCCSCTHHHHHHHHHHHHTTCCEEEEECCCC----------------CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEeeCCCCccChHHHHHHHHHHHHCCCeEEEEEeCCCCcccccccccccCccccccccchHHHHHHHHHHHHHhcc
Confidence 899999999999999998888887664 459999999999554422 25788999999998753
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=7.7e-20 Score=177.29 Aligned_cols=221 Identities=12% Similarity=-0.005 Sum_probs=131.6
Q ss_pred CCCceeEEEec-----CCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCC--C---------
Q 012188 168 DCDCKFCTCWS-----SSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD--S--------- 231 (468)
Q Consensus 168 d~~~~~~~~~~-----~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~--~--------- 231 (468)
||..+.+..+. ++.|+||++||++++..++....... ++||.|+++|+||+|.|..... .
T Consensus 77 dg~~i~~~~~~P~~~~~~~p~vv~~HG~g~~~~~~~~~~~l~----~~G~~v~~~d~rG~g~s~~~~~~~~~p~~~~~~~ 152 (337)
T 1vlq_A 77 RGQRIKGWLLVPKLEEEKLPCVVQYIGYNGGRGFPHDWLFWP----SMGYICFVMDTRGQGSGWLKGDTPDYPEGPVDPQ 152 (337)
T ss_dssp GGCEEEEEEEEECCSCSSEEEEEECCCTTCCCCCGGGGCHHH----HTTCEEEEECCTTCCCSSSCCCCCBCCSSSBCCC
T ss_pred CCCEEEEEEEecCCCCCCccEEEEEcCCCCCCCCchhhcchh----hCCCEEEEecCCCCCCcccCCCCcccccccCCCC
Confidence 45556555542 23478999999987765544333333 3899999999999997743210 0
Q ss_pred -------------CCCHHHHHHHHH---HHHhcccC--CceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCC
Q 012188 232 -------------LYTVREHLDMIE---KSVIEPNK--VKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPK 293 (468)
Q Consensus 232 -------------~~t~~~~~~di~---~~l~~~l~--~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~ 293 (468)
.+++...++|+. +.+.+..+ .++++++|||+||.+++.+|.++| +++++|+.+|....
T Consensus 153 ~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p-~v~~~vl~~p~~~~--- 228 (337)
T 1vlq_A 153 YPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKALLCDVPFLCH--- 228 (337)
T ss_dssp CSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCEEEEESCCSCC---
T ss_pred CCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHhcCC-CccEEEECCCcccC---
Confidence 122334444442 33444333 358999999999999999999999 59999999875432
Q ss_pred CchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhh
Q 012188 294 GAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHT 373 (468)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (468)
....... .....+ ..+... +...... ... .+..
T Consensus 229 ----~~~~~~~-~~~~~~-------------~~~~~~----~~~~~~~------------~~~-------------~~~~ 261 (337)
T 1vlq_A 229 ----FRRAVQL-VDTHPY-------------AEITNF----LKTHRDK------------EEI-------------VFRT 261 (337)
T ss_dssp ----HHHHHHH-CCCTTH-------------HHHHHH----HHHCTTC------------HHH-------------HHHH
T ss_pred ----HHHHHhc-CCCcch-------------HHHHHH----HHhCchh------------HHH-------------HHHh
Confidence 1111110 000000 000000 0000000 000 0000
Q ss_pred HhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChhhHHHHHHhCCC-CeEEEecCCCccccccCcHHHHHHHHH
Q 012188 374 LHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPR-ARVKVIEKKDHITIVVGRQKTFARELE 452 (468)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~-~~l~~i~~~gH~~~~~e~p~~~~~~i~ 452 (468)
+ . .........++++|+|+++|++|.++|++.+..+.+.+++ +++++++++||.....+ ..+.+.
T Consensus 262 ~----~------~~~~~~~~~~i~~P~lii~G~~D~~~p~~~~~~~~~~l~~~~~~~~~~~~gH~~~~~~----~~~~~~ 327 (337)
T 1vlq_A 262 L----S------YFDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNYYAGPKEIRIYPYNNHEGGGSF----QAVEQV 327 (337)
T ss_dssp H----H------TTCHHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCTTTTHHH----HHHHHH
T ss_pred h----h------hccHHHHHHHcCCCEEEEeeCCCCCCCchhHHHHHHhcCCCcEEEEcCCCCCCCcchh----hHHHHH
Confidence 0 0 0011122367789999999999999999999999999974 78999999999964323 344555
Q ss_pred HHHhh
Q 012188 453 EIWRS 457 (468)
Q Consensus 453 ~fl~~ 457 (468)
+||++
T Consensus 328 ~fl~~ 332 (337)
T 1vlq_A 328 KFLKK 332 (337)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55543
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.4e-20 Score=177.82 Aligned_cols=196 Identities=12% Similarity=0.066 Sum_probs=129.4
Q ss_pred CCCeEEEEecCC---CCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHh---cccCC-
Q 012188 180 SSRDTLFVKTQG---PSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVI---EPNKV- 252 (468)
Q Consensus 180 ~~p~vl~lHG~g---~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~---~~l~~- 252 (468)
+.|+||++||++ ++...+..+.+.|+ ++||.|+++|+||+|.+.... .....+..+.+ +.+. +.+++
T Consensus 49 ~~p~vv~lHGgg~~~~~~~~~~~~~~~l~---~~G~~v~~~d~~g~~~~~~~~--~~~~~d~~~~~-~~l~~~~~~~~~~ 122 (283)
T 3bjr_A 49 NLPAIIIVPGGSYTHIPVAQAESLAMAFA---GHGYQAFYLEYTLLTDQQPLG--LAPVLDLGRAV-NLLRQHAAEWHID 122 (283)
T ss_dssp CEEEEEEECCSTTTCCCHHHHHHHHHHHH---TTTCEEEEEECCCTTTCSSCB--THHHHHHHHHH-HHHHHSHHHHTEE
T ss_pred CCcEEEEECCCccccCCccccHHHHHHHH---hCCcEEEEEeccCCCccccCc--hhHHHHHHHHH-HHHHHHHHHhCCC
Confidence 357899999955 23333445666665 579999999999999873111 11233333333 2333 33344
Q ss_pred -ceEEEEEEcccHHHHHHHHHhCCCc-------------cceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhh
Q 012188 253 -KSFHIVAHSLGCILALALAVKHPGS-------------VKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGA 318 (468)
Q Consensus 253 -~~i~lvGhS~Gg~ial~~a~~~p~~-------------v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (468)
++++++||||||.+|+.++.++|++ ++++|+++|........ ...
T Consensus 123 ~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~~~-----------------~~~---- 181 (283)
T 3bjr_A 123 PQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNVVLGYPVISPLLGF-----------------PKD---- 181 (283)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHCCSSEEEESCCCCTTSBC------------------------
T ss_pred cccEEEEEECHHHHHHHHHHhhccccchhhcCCCcCCCCccEEEEcCCcccccccc-----------------ccc----
Confidence 4899999999999999999999987 99999998875421110 000
Q ss_pred hhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCC
Q 012188 319 SMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKC 398 (468)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 398 (468)
. .. ...+... + . .......+.++.+
T Consensus 182 -~----~~--------------------------------~~~~~~~-----~-----------~--~~~~~~~~~~~~~ 206 (283)
T 3bjr_A 182 -D----AT--------------------------------LATWTPT-----P-----------N--ELAADQHVNSDNQ 206 (283)
T ss_dssp ------------------------------------------CCCCC-----G-----------G--GGCGGGSCCTTCC
T ss_pred -c----ch--------------------------------HHHHHHH-----h-----------H--hcCHHHhccCCCC
Confidence 0 00 0000000 0 0 0001111356689
Q ss_pred cEEEEeeCCCCccChhhHHHHHHhCCC----CeEEEecCCCccccccCcH-------------HHHHHHHHHHHhhc
Q 012188 399 DVNVFHGEDDELIPVECSYNVQRKIPR----ARVKVIEKKDHITIVVGRQ-------------KTFARELEEIWRSS 458 (468)
Q Consensus 399 PvLii~G~~D~~vp~~~~~~l~~~~p~----~~l~~i~~~gH~~~~~e~p-------------~~~~~~i~~fl~~~ 458 (468)
|+++++|++|.++|++.++.+.+.+++ +++++++++||.... +.+ +++.+.+.+||++.
T Consensus 207 P~lii~G~~D~~~p~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 282 (283)
T 3bjr_A 207 PTFIWTTADDPIVPATNTLAYATALATAKIPYELHVFKHGPHGLAL-ANAQTAWKPDANQPHVAHWLTLALEWLADN 282 (283)
T ss_dssp CEEEEEESCCTTSCTHHHHHHHHHHHHTTCCEEEEEECCCSHHHHH-HHHHHSCC-------CCHHHHHHHHHHHHT
T ss_pred CEEEEEcCCCCCCChHHHHHHHHHHHHCCCCeEEEEeCCCCccccc-ccccccccccccchhHHHHHHHHHHHHhhc
Confidence 999999999999999999888887753 599999999997765 444 78999999999763
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A | Back alignment and structure |
|---|
Probab=99.83 E-value=1.6e-19 Score=180.12 Aligned_cols=229 Identities=9% Similarity=-0.017 Sum_probs=143.3
Q ss_pred CCCceeEEEec----CCCCeEEEEecCCCC-ccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHH
Q 012188 168 DCDCKFCTCWS----SSSRDTLFVKTQGPS-AFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMI 242 (468)
Q Consensus 168 d~~~~~~~~~~----~~~p~vl~lHG~g~s-~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di 242 (468)
++..+..+.+. ++.|+||++||++++ ..++..+...+. +.||+|+++|+||+|.|..... ..+..+++.++
T Consensus 176 ~g~~l~~~~~~P~~~~~~P~vv~~hG~~~~~~~~~~~~~~~l~---~~G~~V~~~D~~G~G~s~~~~~-~~~~~~~~~~v 251 (415)
T 3mve_A 176 EKGKITAHLHLTNTDKPHPVVIVSAGLDSLQTDMWRLFRDHLA---KHDIAMLTVDMPSVGYSSKYPL-TEDYSRLHQAV 251 (415)
T ss_dssp SSSEEEEEEEESCSSSCEEEEEEECCTTSCGGGGHHHHHHTTG---GGTCEEEEECCTTSGGGTTSCC-CSCTTHHHHHH
T ss_pred CCEEEEEEEEecCCCCCCCEEEEECCCCccHHHHHHHHHHHHH---hCCCEEEEECCCCCCCCCCCCC-CCCHHHHHHHH
Confidence 55556655552 234789999998877 345544455554 4899999999999999976543 24566666666
Q ss_pred HHHHhcccC---CceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhh
Q 012188 243 EKSVIEPNK---VKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGAS 319 (468)
Q Consensus 243 ~~~l~~~l~---~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (468)
...+...+ .++++++||||||.+++.+|..+|++++++|+++|+... .......... .+..
T Consensus 252 -~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~~-------~~~~~~~~~~---~~~~----- 315 (415)
T 3mve_A 252 -LNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIHD-------IFASPQKLQQ---MPKM----- 315 (415)
T ss_dssp -HHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTTTTCCEEEEESCCCSH-------HHHCHHHHTT---SCHH-----
T ss_pred -HHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEECCcccc-------ccccHHHHHH---hHHH-----
Confidence 35555443 478999999999999999999999999999999987422 0000000000 0000
Q ss_pred hHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCc
Q 012188 320 MACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCD 399 (468)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 399 (468)
................ ..+ ....... ......... ..++++|
T Consensus 316 -------~~~~~~~~~g~~~~~~--------------------------~~~---~~~~~~~-~~~~~~~~~-~~~i~~P 357 (415)
T 3mve_A 316 -------YLDVLASRLGKSVVDI--------------------------YSL---SGQMAAW-SLKVQGFLS-SRKTKVP 357 (415)
T ss_dssp -------HHHHHHHHTTCSSBCH--------------------------HHH---HHHGGGG-CTTTTTTTT-SSCBSSC
T ss_pred -------HHHHHHHHhCCCccCH--------------------------HHH---HHHHhhc-Ccccccccc-cCCCCCC
Confidence 0000000000000000 000 0000000 000000000 2577999
Q ss_pred EEEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 400 VNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 400 vLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
+|+++|++|.++|++.++.+.+..++++++++++..+ . +.++++.+.+.+||++.
T Consensus 358 vLii~G~~D~~vp~~~~~~l~~~~~~~~l~~i~g~~~---h-~~~~~~~~~i~~fL~~~ 412 (415)
T 3mve_A 358 ILAMSLEGDPVSPYSDNQMVAFFSTYGKAKKISSKTI---T-QGYEQSLDLAIKWLEDE 412 (415)
T ss_dssp EEEEEETTCSSSCHHHHHHHHHTBTTCEEEEECCCSH---H-HHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCCCHHHHHHHHHhCCCceEEEecCCCc---c-cchHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998322 2 36778899999999763
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* | Back alignment and structure |
|---|
Probab=99.83 E-value=5e-19 Score=169.24 Aligned_cols=222 Identities=14% Similarity=0.038 Sum_probs=134.2
Q ss_pred CCCceeEEEec----CCCCeEEEEecCCCC-ccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCC------------
Q 012188 168 DCDCKFCTCWS----SSSRDTLFVKTQGPS-AFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD------------ 230 (468)
Q Consensus 168 d~~~~~~~~~~----~~~p~vl~lHG~g~s-~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~------------ 230 (468)
+|..+.++.+. ++.|+||++||++++ ...+....... ++||.|+++|+||+|.|.....
T Consensus 65 ~g~~i~~~~~~P~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~----~~g~~v~~~d~rg~g~s~~~~~~~~~~~~~~~~~ 140 (318)
T 1l7a_A 65 GNARITGWYAVPDKEGPHPAIVKYHGYNASYDGEIHEMVNWA----LHGYATFGMLVRGQQRSEDTSISPHGHALGWMTK 140 (318)
T ss_dssp GGEEEEEEEEEESSCSCEEEEEEECCTTCCSGGGHHHHHHHH----HTTCEEEEECCTTTSSSCCCCCCSSCCSSSSTTT
T ss_pred CCCEEEEEEEeeCCCCCccEEEEEcCCCCCCCCCcccccchh----hCCcEEEEecCCCCCCCCCcccccCCccccceec
Confidence 34345544442 334789999999887 65554444333 3899999999999999975521
Q ss_pred -----CCCCHHHHHHHHH---HHHhcccCC--ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHH
Q 012188 231 -----SLYTVREHLDMIE---KSVIEPNKV--KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQY 300 (468)
Q Consensus 231 -----~~~t~~~~~~di~---~~l~~~l~~--~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~ 300 (468)
..+.....++|+. +.+.+..+. ++++++|||+||.+++.+|.++|+ +.++|+.+|.... ...
T Consensus 141 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~-~~~~v~~~p~~~~-------~~~ 212 (318)
T 1l7a_A 141 GILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVADYPYLSN-------FER 212 (318)
T ss_dssp TTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEESCCSCC-------HHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHhccCCC-ccEEEecCCcccC-------HHH
Confidence 1112334444442 334443333 689999999999999999999986 8888887765432 111
Q ss_pred HHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhc
Q 012188 301 VMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICG 380 (468)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (468)
.... .....+.. ...+.... . . ....... .. .. .
T Consensus 213 ~~~~-~~~~~~~~------~~~~~~~~-----------~-~---------~~~~~~~-~~------------~~----~- 246 (318)
T 1l7a_A 213 AIDV-ALEQPYLE------INSFFRRN-----------G-S---------PETEVQA-MK------------TL----S- 246 (318)
T ss_dssp HHHH-CCSTTTTH------HHHHHHHS-----------C-C---------HHHHHHH-HH------------HH----H-
T ss_pred HHhc-CCcCccHH------HHHHHhcc-----------C-C---------cccHHHH-HH------------hh----c-
Confidence 1111 11111100 00000000 0 0 0000000 00 00 0
Q ss_pred ccccccchHHHhhccCCCcEEEEeeCCCCccChhhHHHHHHhCCC-CeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 381 TANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPR-ARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 381 ~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~-~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
.......+.++++|+++++|++|.++|++.++.+.+.+++ +++++++++||... .++.+.+.+||++
T Consensus 247 -----~~~~~~~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~~~-----~~~~~~~~~fl~~ 314 (318)
T 1l7a_A 247 -----YFDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLETKKELKVYRYFGHEYI-----PAFQTEKLAFFKQ 314 (318)
T ss_dssp -----TTCHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCSSCC-----HHHHHHHHHHHHH
T ss_pred -----cccHHHHHhhCCCCEEEEeccCCCCCCcccHHHHHhhcCCCeeEEEccCCCCCCc-----chhHHHHHHHHHH
Confidence 0011223467789999999999999999999999999875 79999999999933 3456777777764
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.9e-20 Score=187.55 Aligned_cols=111 Identities=12% Similarity=0.089 Sum_probs=85.4
Q ss_pred ceeEEEec----CCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 012188 171 CKFCTCWS----SSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSV 246 (468)
Q Consensus 171 ~~~~~~~~----~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l 246 (468)
.+..+.|. ++.|+||++||++++.. ..+...|+ ++||+|+++|+||+|.++.... .+..+++.+.+ ..+
T Consensus 144 ~l~~~l~~P~~~~~~P~Vv~~hG~~~~~~--~~~a~~La---~~Gy~V~a~D~rG~g~~~~~~~-~~~~~d~~~~~-~~l 216 (422)
T 3k2i_A 144 RVRATLFLPPGPGPFPGIIDIFGIGGGLL--EYRASLLA---GHGFATLALAYYNFEDLPNNMD-NISLEYFEEAV-CYM 216 (422)
T ss_dssp TEEEEEEECSSSCCBCEEEEECCTTCSCC--CHHHHHHH---TTTCEEEEEECSSSTTSCSSCS-CEETHHHHHHH-HHH
T ss_pred cEEEEEEcCCCCCCcCEEEEEcCCCcchh--HHHHHHHH---hCCCEEEEEccCCCCCCCCCcc-cCCHHHHHHHH-HHH
Confidence 45555553 23589999999876522 23455565 5899999999999998865543 35677777777 577
Q ss_pred hcccC--CceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCC
Q 012188 247 IEPNK--VKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYY 289 (468)
Q Consensus 247 ~~~l~--~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~ 289 (468)
.+..+ .++++|+||||||.+|+.+|.++|+ ++++|+++++..
T Consensus 217 ~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~-v~a~V~~~~~~~ 260 (422)
T 3k2i_A 217 LQHPQVKGPGIGLLGISLGADICLSMASFLKN-VSATVSINGSGI 260 (422)
T ss_dssp HTSTTBCCSSEEEEEETHHHHHHHHHHHHCSS-EEEEEEESCCSB
T ss_pred HhCcCcCCCCEEEEEECHHHHHHHHHHhhCcC-ccEEEEEcCccc
Confidence 76644 4799999999999999999999998 999999998764
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} | Back alignment and structure |
|---|
Probab=99.83 E-value=3.5e-20 Score=172.81 Aligned_cols=170 Identities=12% Similarity=0.066 Sum_probs=127.3
Q ss_pred CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH-------HhcccCC
Q 012188 180 SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKS-------VIEPNKV 252 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~-------l~~~l~~ 252 (468)
+.|+|||+||++++...+..+.+.|. ++||.|+++|+||.+. ..+....++.+... +...++.
T Consensus 48 ~~p~vv~~HG~~~~~~~~~~~~~~l~---~~G~~v~~~d~~~s~~-------~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 117 (258)
T 2fx5_A 48 RHPVILWGNGTGAGPSTYAGLLSHWA---SHGFVVAAAETSNAGT-------GREMLACLDYLVRENDTPYGTYSGKLNT 117 (258)
T ss_dssp CEEEEEEECCTTCCGGGGHHHHHHHH---HHTCEEEEECCSCCTT-------SHHHHHHHHHHHHHHHSSSSTTTTTEEE
T ss_pred CceEEEEECCCCCCchhHHHHHHHHH---hCCeEEEEecCCCCcc-------HHHHHHHHHHHHhcccccccccccccCc
Confidence 45789999999988776667777776 4699999999996311 12333344444211 2335566
Q ss_pred ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHH
Q 012188 253 KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTIC 332 (468)
Q Consensus 253 ~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (468)
++++++||||||.+++.++ .+++++++++++|.....+.
T Consensus 118 ~~i~l~G~S~GG~~a~~~a--~~~~v~~~v~~~~~~~~~~~--------------------------------------- 156 (258)
T 2fx5_A 118 GRVGTSGHSQGGGGSIMAG--QDTRVRTTAPIQPYTLGLGH--------------------------------------- 156 (258)
T ss_dssp EEEEEEEEEHHHHHHHHHT--TSTTCCEEEEEEECCSSTTC---------------------------------------
T ss_pred cceEEEEEChHHHHHHHhc--cCcCeEEEEEecCccccccc---------------------------------------
Confidence 7999999999999999988 56789999998864321000
Q ss_pred HHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccC
Q 012188 333 LLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIP 412 (468)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp 412 (468)
....+.++++|+|+++|++|.++|
T Consensus 157 --------------------------------------------------------~~~~~~~i~~P~lii~G~~D~~~~ 180 (258)
T 2fx5_A 157 --------------------------------------------------------DSASQRRQQGPMFLMSGGGDTIAF 180 (258)
T ss_dssp --------------------------------------------------------CGGGGGCCSSCEEEEEETTCSSSC
T ss_pred --------------------------------------------------------chhhhccCCCCEEEEEcCCCcccC
Confidence 000125678999999999999999
Q ss_pred hhh-HHHHHHhC-CCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 413 VEC-SYNVQRKI-PRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 413 ~~~-~~~l~~~~-p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
.+. ++.+.+.. +++++++++++||+.+. ++++++.+.+.+||++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~-~~~~~~~~~i~~fl~~ 226 (258)
T 2fx5_A 181 PYLNAQPVYRRANVPVFWGERRYVSHFEPV-GSGGAYRGPSTAWFRF 226 (258)
T ss_dssp HHHHTHHHHHHCSSCEEEEEESSCCTTSST-TTCGGGHHHHHHHHHH
T ss_pred chhhHHHHHhccCCCeEEEEECCCCCcccc-chHHHHHHHHHHHHHH
Confidence 986 77777774 35899999999999997 8899999999999984
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.83 E-value=5.9e-20 Score=191.62 Aligned_cols=219 Identities=10% Similarity=0.045 Sum_probs=147.3
Q ss_pred CCCceeEEEecC-----CCCeEEEEecCCCC--ccchhhhhhhccccCCCcceEEEECCCC---CCCCCCC---C-CCCC
Q 012188 168 DCDCKFCTCWSS-----SSRDTLFVKTQGPS--AFWTETLFPNFSSASKSTYRLFAIDLLG---FGRSPKP---T-DSLY 233 (468)
Q Consensus 168 d~~~~~~~~~~~-----~~p~vl~lHG~g~s--~~~~~~~~~~L~~~~~~gy~Via~D~~G---~G~S~~~---~-~~~~ 233 (468)
++..+.+..+.+ +.|+||++||++.+ ...+..+...|+ ++||.|+++|+|| ||.+... . ....
T Consensus 342 ~g~~i~~~~~~p~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~---~~G~~v~~~d~rG~~~~G~s~~~~~~~~~~~~ 418 (582)
T 3o4h_A 342 DGSRVPTYVLESGRAPTPGPTVVLVHGGPFAEDSDSWDTFAASLA---AAGFHVVMPNYRGSTGYGEEWRLKIIGDPCGG 418 (582)
T ss_dssp TSCEEEEEEEEETTSCSSEEEEEEECSSSSCCCCSSCCHHHHHHH---HTTCEEEEECCTTCSSSCHHHHHTTTTCTTTH
T ss_pred CCCEEEEEEEcCCCCCCCCcEEEEECCCcccccccccCHHHHHHH---hCCCEEEEeccCCCCCCchhHHhhhhhhcccc
Confidence 565666666633 45789999997764 333334566665 4899999999999 7766221 1 1223
Q ss_pred CHHHHHHHHHHHHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCch
Q 012188 234 TVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPL 313 (468)
Q Consensus 234 t~~~~~~di~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (468)
.++++.+.+ +.++++...++++++||||||++++.+|.++|++++++|+++|.... ....... .
T Consensus 419 ~~~d~~~~~-~~l~~~~~~d~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~--------~~~~~~~-~------ 482 (582)
T 3o4h_A 419 ELEDVSAAA-RWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDW--------EEMYELS-D------ 482 (582)
T ss_dssp HHHHHHHHH-HHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTTSSCEEEESCCCCH--------HHHHHTC-C------
T ss_pred cHHHHHHHH-HHHHhCCCcceEEEEEECHHHHHHHHHHhcCCCceEEEEEcCCccCH--------HHHhhcc-c------
Confidence 566777766 57776655569999999999999999999999999999999985421 0000000 0
Q ss_pred hhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhh
Q 012188 314 IAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVR 393 (468)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (468)
.....+. ...+ .. ....+. .......+
T Consensus 483 ----~~~~~~~---------------------~~~~-~~--------------~~~~~~-------------~~sp~~~~ 509 (582)
T 3o4h_A 483 ----AAFRNFI---------------------EQLT-GG--------------SREIMR-------------SRSPINHV 509 (582)
T ss_dssp ----HHHHHHH---------------------HHHT-TT--------------CHHHHH-------------HTCGGGGG
T ss_pred ----chhHHHH---------------------HHHc-Cc--------------CHHHHH-------------hcCHHHHH
Confidence 0000000 0000 00 000000 00011223
Q ss_pred ccCCCcEEEEeeCCCCccChhhHHHHHHhCCC----CeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 394 NHVKCDVNVFHGEDDELIPVECSYNVQRKIPR----ARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 394 ~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~----~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
.++++|+|+++|++|.++|++.++++.+.+++ +++++++++||.....++++++.+.+.+||++.
T Consensus 510 ~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 578 (582)
T 3o4h_A 510 DRIKEPLALIHPQNASRTPLKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAVFFLATQ 578 (582)
T ss_dssp GGCCSCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHHHHHHHHHH
T ss_pred hcCCCCEEEEecCCCCCcCHHHHHHHHHHHHhCCCCEEEEEECCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence 57789999999999999999999999888754 799999999999874478899999999999864
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.5e-19 Score=165.97 Aligned_cols=181 Identities=13% Similarity=0.109 Sum_probs=126.5
Q ss_pred cCCCCeEEEEecCCCCccchhhhhhhcccc--CCCcceEEEECCCCCCCC-----------------CCCCCCCCCHHHH
Q 012188 178 SSSSRDTLFVKTQGPSAFWTETLFPNFSSA--SKSTYRLFAIDLLGFGRS-----------------PKPTDSLYTVREH 238 (468)
Q Consensus 178 ~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~--~~~gy~Via~D~~G~G~S-----------------~~~~~~~~t~~~~ 238 (468)
.+..|+|||+||++++...+..+...+... ...+|+|+++|.|+++.+ ........++++.
T Consensus 20 ~~~~p~vv~lHG~g~~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ 99 (239)
T 3u0v_A 20 GRHSASLIFLHGSGDSGQGLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDCPEHLESIDVM 99 (239)
T ss_dssp SCCCEEEEEECCTTCCHHHHHHHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSSSSSCCCHHHHHHH
T ss_pred CCCCcEEEEEecCCCchhhHHHHHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCCcccccchhhHHHH
Confidence 345689999999998766555566666522 235799999998753211 1111122466777
Q ss_pred HHHHHHHHhcc-----cCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCch
Q 012188 239 LDMIEKSVIEP-----NKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPL 313 (468)
Q Consensus 239 ~~di~~~l~~~-----l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (468)
++++ ..+++. ++.++++|+||||||.+++.++.++|++++++|++++........
T Consensus 100 ~~~l-~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~------------------- 159 (239)
T 3u0v_A 100 CQVL-TDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASAV------------------- 159 (239)
T ss_dssp HHHH-HHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTTCHH-------------------
T ss_pred HHHH-HHHHHHHHHhCCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCchhHH-------------------
Confidence 7777 466654 456799999999999999999999999999999999865331000
Q ss_pred hhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhh
Q 012188 314 IAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVR 393 (468)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (468)
. .. .. .
T Consensus 160 ----------~------------------~~--------------------------------------------~~--~ 165 (239)
T 3u0v_A 160 ----------Y------------------QA--------------------------------------------LQ--K 165 (239)
T ss_dssp ----------H------------------HH--------------------------------------------HH--H
T ss_pred ----------H------------------HH--------------------------------------------HH--h
Confidence 0 00 00 0
Q ss_pred ccCCCc-EEEEeeCCCCccChhhHHHHHHhCC----CCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 394 NHVKCD-VNVFHGEDDELIPVECSYNVQRKIP----RARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 394 ~~i~~P-vLii~G~~D~~vp~~~~~~l~~~~p----~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
....+| +++++|++|.++|.+.++.+.+.++ ++++++++++||.... +. .+.+.+||++
T Consensus 166 ~~~~~pp~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~-~~----~~~~~~~l~~ 229 (239)
T 3u0v_A 166 SNGVLPELFQCHGTADELVLHSWAEETNSMLKSLGVTTKFHSFPNVYHELSK-TE----LDILKLWILT 229 (239)
T ss_dssp CCSCCCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCCH-HH----HHHHHHHHHH
T ss_pred hccCCCCEEEEeeCCCCccCHHHHHHHHHHHHHcCCcEEEEEeCCCCCcCCH-HH----HHHHHHHHHH
Confidence 233667 9999999999999988888777664 6799999999999873 44 4445555554
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.82 E-value=4.5e-20 Score=186.05 Aligned_cols=112 Identities=11% Similarity=0.098 Sum_probs=85.1
Q ss_pred ceeEEEec----CCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 012188 171 CKFCTCWS----SSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSV 246 (468)
Q Consensus 171 ~~~~~~~~----~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l 246 (468)
.+..+.|. ++.|+||++||+++....+ ....|+ ++||.|+++|+||+|.++.... ...++++.+.+ ..+
T Consensus 160 ~l~~~l~~P~~~~~~P~Vv~lhG~~~~~~~~--~a~~La---~~Gy~Vla~D~rG~~~~~~~~~-~~~~~d~~~a~-~~l 232 (446)
T 3hlk_A 160 RVRGTLFLPPEPGPFPGIVDMFGTGGGLLEY--RASLLA---GKGFAVMALAYYNYEDLPKTME-TLHLEYFEEAM-NYL 232 (446)
T ss_dssp TEEEEEEECSSSCCBCEEEEECCSSCSCCCH--HHHHHH---TTTCEEEEECCSSSTTSCSCCS-EEEHHHHHHHH-HHH
T ss_pred eEEEEEEeCCCCCCCCEEEEECCCCcchhhH--HHHHHH---hCCCEEEEeccCCCCCCCcchh-hCCHHHHHHHH-HHH
Confidence 45545442 2347899999988753322 355555 5899999999999999876543 24577777777 577
Q ss_pred hcccCC--ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCC
Q 012188 247 IEPNKV--KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 247 ~~~l~~--~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~ 290 (468)
.++.++ ++++|+||||||.+|+.+|.++|+ ++++|+++++...
T Consensus 233 ~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~-v~a~V~~~~~~~~ 277 (446)
T 3hlk_A 233 LSHPEVKGPGVGLLGISKGGELCLSMASFLKG-ITAAVVINGSVAN 277 (446)
T ss_dssp HTSTTBCCSSEEEEEETHHHHHHHHHHHHCSC-EEEEEEESCCSBC
T ss_pred HhCCCCCCCCEEEEEECHHHHHHHHHHHhCCC-ceEEEEEcCcccc
Confidence 776554 699999999999999999999998 9999999986543
|
| >3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.6e-19 Score=174.49 Aligned_cols=218 Identities=9% Similarity=0.036 Sum_probs=131.2
Q ss_pred CCCCeEEEEecCCC---CccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceE
Q 012188 179 SSSRDTLFVKTQGP---SAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSF 255 (468)
Q Consensus 179 ~~~p~vl~lHG~g~---s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i 255 (468)
+++|+|||+||++. +...+..+...|+. +.||+|+++|+||.+.... ...+++..+.+ ..+++.++.+++
T Consensus 94 ~~~p~vv~lHGgg~~~~~~~~~~~~~~~la~--~~g~~vi~~D~r~~~~~~~----~~~~~d~~~~~-~~l~~~~~~~~i 166 (326)
T 3d7r_A 94 QIDKKILYIHGGFNALQPSPFHWRLLDKITL--STLYEVVLPIYPKTPEFHI----DDTFQAIQRVY-DQLVSEVGHQNV 166 (326)
T ss_dssp CCSSEEEEECCSTTTSCCCHHHHHHHHHHHH--HHCSEEEEECCCCTTTSCH----HHHHHHHHHHH-HHHHHHHCGGGE
T ss_pred CCCeEEEEECCCcccCCCCHHHHHHHHHHHH--HhCCEEEEEeCCCCCCCCc----hHHHHHHHHHH-HHHHhccCCCcE
Confidence 34689999999662 33333345565541 1489999999999654321 23566777777 577778888999
Q ss_pred EEEEEcccHHHHHHHHHhCCCc----cceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHH
Q 012188 256 HIVAHSLGCILALALAVKHPGS----VKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTI 331 (468)
Q Consensus 256 ~lvGhS~Gg~ial~~a~~~p~~----v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (468)
+|+||||||.+|+.+|.++|++ ++++|+++|.................. .. ....
T Consensus 167 ~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~-~~--~~~~------------------ 225 (326)
T 3d7r_A 167 VVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDISDALIEQ-DA--VLSQ------------------ 225 (326)
T ss_dssp EEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTTCCHHHHHH-CS--SCCH------------------
T ss_pred EEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCChhHHhhhccc-Cc--ccCH------------------
Confidence 9999999999999999998877 999999998764322111000000000 00 0000
Q ss_pred HHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCcc
Q 012188 332 CLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELI 411 (468)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~v 411 (468)
........ .+......... .... +...+.. -+|+++++|++|..+
T Consensus 226 --------~~~~~~~~--------~~~~~~~~~~~-----------------~~~~-~~~~~~~-~~P~lii~G~~D~~~ 270 (326)
T 3d7r_A 226 --------FGVNEIMK--------KWANGLPLTDK-----------------RISP-INGTIEG-LPPVYMFGGGREMTH 270 (326)
T ss_dssp --------HHHHHHHH--------HHHTTSCTTST-----------------TTSG-GGSCCTT-CCCEEEEEETTSTTH
T ss_pred --------HHHHHHHH--------HhcCCCCCCCC-----------------eECc-ccCCccc-CCCEEEEEeCcccch
Confidence 00000000 00000000000 0000 0000112 259999999999765
Q ss_pred Chh--hHHHHHHhCCCCeEEEecCCCccccc--cCcHHHHHHHHHHHHhhcC
Q 012188 412 PVE--CSYNVQRKIPRARVKVIEKKDHITIV--VGRQKTFARELEEIWRSSS 459 (468)
Q Consensus 412 p~~--~~~~l~~~~p~~~l~~i~~~gH~~~~--~e~p~~~~~~i~~fl~~~~ 459 (468)
+.. ..+.+.+..+++++++++++||..+. .++++++.+.|.+||++..
T Consensus 271 ~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~i~~fl~~~l 322 (326)
T 3d7r_A 271 PDMKLFEQMMLQHHQYIEFYDYPKMVHDFPIYPIRQSHKAIKQIAKSIDEDV 322 (326)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSSSHHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHHCCCcEEEEEeCCCcccccccCCHHHHHHHHHHHHHHHHHh
Confidence 422 23444445567899999999999875 3678899999999997653
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.81 E-value=2.3e-19 Score=161.61 Aligned_cols=170 Identities=11% Similarity=0.086 Sum_probs=123.4
Q ss_pred CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEEC-------------CCCCCCCCCCCCCCCCHHHHHHHHH---
Q 012188 180 SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAID-------------LLGFGRSPKPTDSLYTVREHLDMIE--- 243 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D-------------~~G~G~S~~~~~~~~t~~~~~~di~--- 243 (468)
+.| ||++||++++...+..+.+.|. .+|.|+++| ++|+|.+.........+.+.++++.
T Consensus 16 ~~p-vv~lHG~g~~~~~~~~~~~~l~----~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~ 90 (209)
T 3og9_A 16 LAP-LLLLHSTGGDEHQLVEIAEMIA----PSHPILSIRGRINEQGVNRYFKLRGLGGFTKENFDLESLDEETDWLTDEV 90 (209)
T ss_dssp SCC-EEEECCTTCCTTTTHHHHHHHS----TTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGBCHHHHHHHHHHHHHHH
T ss_pred CCC-EEEEeCCCCCHHHHHHHHHhcC----CCceEEEecCCcCCCCcccceecccccccccCCCCHHHHHHHHHHHHHHH
Confidence 456 9999999887776666778777 899999999 7788776433211123333344431
Q ss_pred HHHhcccCC--ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhH
Q 012188 244 KSVIEPNKV--KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMA 321 (468)
Q Consensus 244 ~~l~~~l~~--~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (468)
..+.+..++ ++++++||||||.+++.+|.++|++++++|++++........
T Consensus 91 ~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~--------------------------- 143 (209)
T 3og9_A 91 SLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDFEQ--------------------------- 143 (209)
T ss_dssp HHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCCCCC---------------------------
T ss_pred HHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCcccc---------------------------
Confidence 334455565 789999999999999999999999999999999764321100
Q ss_pred HHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEE
Q 012188 322 CWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVN 401 (468)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvL 401 (468)
. ....++|++
T Consensus 144 ----------------------------------------------------------------~------~~~~~~p~l 153 (209)
T 3og9_A 144 ----------------------------------------------------------------T------VQLDDKHVF 153 (209)
T ss_dssp ----------------------------------------------------------------C------CCCTTCEEE
T ss_pred ----------------------------------------------------------------c------ccccCCCEE
Confidence 0 023478999
Q ss_pred EEeeCCCCccChhhHHHHHHhCC----CCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 402 VFHGEDDELIPVECSYNVQRKIP----RARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 402 ii~G~~D~~vp~~~~~~l~~~~p----~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
+++|++|.++|.+.++.+.+.++ ..++++++ +||.... +..+.+.+||++
T Consensus 154 i~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~-~gH~~~~-----~~~~~~~~~l~~ 207 (209)
T 3og9_A 154 LSYAPNDMIVPQKNFGDLKGDLEDSGCQLEIYESS-LGHQLTQ-----EEVLAAKKWLTE 207 (209)
T ss_dssp EEECTTCSSSCHHHHHHHHHHHHHTTCEEEEEECS-STTSCCH-----HHHHHHHHHHHH
T ss_pred EEcCCCCCccCHHHHHHHHHHHHHcCCceEEEEcC-CCCcCCH-----HHHHHHHHHHHh
Confidence 99999999999999888877764 35777887 6998653 345667778765
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=2e-19 Score=191.75 Aligned_cols=213 Identities=10% Similarity=0.070 Sum_probs=141.7
Q ss_pred CC-CceeEEEecCC-------CCeEEEEecCCCCc----cchhh---hhhhccccCCCcceEEEECCCCCCCCCCCCC--
Q 012188 168 DC-DCKFCTCWSSS-------SRDTLFVKTQGPSA----FWTET---LFPNFSSASKSTYRLFAIDLLGFGRSPKPTD-- 230 (468)
Q Consensus 168 d~-~~~~~~~~~~~-------~p~vl~lHG~g~s~----~~~~~---~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~-- 230 (468)
++ ..+.+..+.+. .|+||++||++.+. .|... +.+.|+ ++||.|+++|+||+|.|..+..
T Consensus 464 ~g~~~~~~~~~~P~~~~~~~~~p~iv~~HGg~~~~~~~~~~~~~~~~~~~~la---~~G~~v~~~d~rG~g~s~~~~~~~ 540 (706)
T 2z3z_A 464 DGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMA---QKGYAVFTVDSRGSANRGAAFEQV 540 (706)
T ss_dssp TSSSEEEEEEECCTTCCTTSCEEEEEECCCCTTCCCCCSCC----CCHHHHHH---HTTCEEEEECCTTCSSSCHHHHHT
T ss_pred CCCEEEEEEEEeCCCCCCCCCccEEEEecCCCCceeeccccccCchHHHHHHH---hCCcEEEEEecCCCcccchhHHHH
Confidence 55 56777766332 37899999987654 34432 455554 4799999999999999854311
Q ss_pred --C---CCCHHHHHHHHHHHHhcc--cCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHH
Q 012188 231 --S---LYTVREHLDMIEKSVIEP--NKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMR 303 (468)
Q Consensus 231 --~---~~t~~~~~~di~~~l~~~--l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~ 303 (468)
. ...++++.+.+ +.+.+. ++.++++|+||||||++++.+|.++|++++++|+++|........
T Consensus 541 ~~~~~~~~~~~D~~~~~-~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~--------- 610 (706)
T 2z3z_A 541 IHRRLGQTEMADQMCGV-DFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGGPVIDWNRYA--------- 610 (706)
T ss_dssp TTTCTTHHHHHHHHHHH-HHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCCCCGGGSB---------
T ss_pred HhhccCCccHHHHHHHH-HHHHhCCCCCchheEEEEEChHHHHHHHHHHhCCCcEEEEEEcCCccchHHHH---------
Confidence 1 11234555555 344433 234689999999999999999999999999999999865321000
Q ss_pred hhcCCCCCchhhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccc
Q 012188 304 KVAPRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTAN 383 (468)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (468)
. .+.+.+ +. .+.. ....+.
T Consensus 611 --------------~---~~~~~~-------~~-~~~~-------------------------~~~~~~----------- 629 (706)
T 2z3z_A 611 --------------I---MYGERY-------FD-APQE-------------------------NPEGYD----------- 629 (706)
T ss_dssp --------------H---HHHHHH-------HC-CTTT-------------------------CHHHHH-----------
T ss_pred --------------h---hhhhhh-------cC-Cccc-------------------------Chhhhh-----------
Confidence 0 000000 00 0000 000000
Q ss_pred cccchHHHhhccCCCcEEEEeeCCCCccChhhHHHHHHhCC----CCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 384 KLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIP----RARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 384 ~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p----~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
.......+.++++|+|+++|++|.++|++.++++.+.++ +.++++++++||.++. ++++++.+.+.+||++
T Consensus 630 --~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~ 704 (706)
T 2z3z_A 630 --AANLLKRAGDLKGRLMLIHGAIDPVVVWQHSLLFLDACVKARTYPDYYVYPSHEHNVMG-PDRVHLYETITRYFTD 704 (706)
T ss_dssp --HHCGGGGGGGCCSEEEEEEETTCSSSCTHHHHHHHHHHHHHTCCCEEEEETTCCSSCCT-THHHHHHHHHHHHHHH
T ss_pred --hCCHhHhHHhCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCc-ccHHHHHHHHHHHHHH
Confidence 000111235778999999999999999999988888775 3599999999999987 6899999999999976
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.80 E-value=9.8e-19 Score=185.06 Aligned_cols=225 Identities=11% Similarity=0.039 Sum_probs=149.2
Q ss_pred CCCceeEEEecC-----------CCCeEEEEecCCCCcc--chhhhhhhccccCCCcceEEEECCCC---CCCCCCCC--
Q 012188 168 DCDCKFCTCWSS-----------SSRDTLFVKTQGPSAF--WTETLFPNFSSASKSTYRLFAIDLLG---FGRSPKPT-- 229 (468)
Q Consensus 168 d~~~~~~~~~~~-----------~~p~vl~lHG~g~s~~--~~~~~~~~L~~~~~~gy~Via~D~~G---~G~S~~~~-- 229 (468)
++..+.+..+.+ +.|+||++||++.+.. .+..+...|+ ++||.|+++|+|| ||.+....
T Consensus 400 dg~~i~~~~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~---~~G~~v~~~d~rG~~~~G~~~~~~~~ 476 (662)
T 3azo_A 400 DGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRVPAVLDLDVAYFT---SRGIGVADVNYGGSTGYGRAYRERLR 476 (662)
T ss_dssp TSCEEEEEEECCCCSSEECCTTCCCCEEEEECSSSSSCCCCSCCHHHHHHH---TTTCEEEEEECTTCSSSCHHHHHTTT
T ss_pred CCCEEEEEEECCCCccccCCCCCCccEEEEECCCCCccCcccchHHHHHHH---hCCCEEEEECCCCCCCccHHHHHhhc
Confidence 555666665522 2478999999986543 3334556665 5799999999999 88773211
Q ss_pred -C-CCCCHHHHHHHHHHHHhcc--cCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhh
Q 012188 230 -D-SLYTVREHLDMIEKSVIEP--NKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKV 305 (468)
Q Consensus 230 -~-~~~t~~~~~~di~~~l~~~--l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~ 305 (468)
. ...+++++++.+ ..++++ ++.++++|+||||||++++.++.+ |++++++|+++|.... ......
T Consensus 477 ~~~~~~~~~d~~~~~-~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~v~~~~~~~~--------~~~~~~- 545 (662)
T 3azo_A 477 GRWGVVDVEDCAAVA-TALAEEGTADRARLAVRGGSAGGWTAASSLVS-TDVYACGTVLYPVLDL--------LGWADG- 545 (662)
T ss_dssp TTTTTHHHHHHHHHH-HHHHHTTSSCTTCEEEEEETHHHHHHHHHHHH-CCCCSEEEEESCCCCH--------HHHHTT-
T ss_pred cccccccHHHHHHHH-HHHHHcCCcChhhEEEEEECHHHHHHHHHHhC-cCceEEEEecCCccCH--------HHHhcc-
Confidence 1 234578888888 678777 566799999999999999998886 9999999999876432 010000
Q ss_pred cCCCCCchhhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccc
Q 012188 306 APRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKL 385 (468)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (468)
. .... .. .+... .+.... .. ...+. .
T Consensus 546 -~---~~~~--~~---~~~~~-------~~~~~~------------~~--------------~~~~~------~------ 571 (662)
T 3azo_A 546 -G---THDF--ES---RYLDF-------LIGSFE------------EF--------------PERYR------D------ 571 (662)
T ss_dssp -C---SCGG--GT---THHHH-------HTCCTT------------TC--------------HHHHH------H------
T ss_pred -c---ccch--hh---HhHHH-------HhCCCc------------cc--------------hhHHH------h------
Confidence 0 0000 00 00000 000000 00 00000 0
Q ss_pred cchHHHhhccCCCcEEEEeeCCCCccChhhHHHHHHhCCCC----eEEEecCCCccccccCcHHHHHHHHHHHHhhcCCC
Q 012188 386 DGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRA----RVKVIEKKDHITIVVGRQKTFARELEEIWRSSSGH 461 (468)
Q Consensus 386 ~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~~----~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~~~ 461 (468)
......+.++++|+|+++|++|.++|++.++++.+.+++. ++++++++||.....+++.++.+.+.+||++.-..
T Consensus 572 -~sp~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~~ 650 (662)
T 3azo_A 572 -RAPLTRADRVRVPFLLLQGLEDPVCPPEQCDRFLEAVAGCGVPHAYLSFEGEGHGFRRKETMVRALEAELSLYAQVFGV 650 (662)
T ss_dssp -TCGGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHTTSCCCEEEEEETTCCSSCCSHHHHHHHHHHHHHHHHHHTTC
T ss_pred -hChHhHhccCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHcCCCEEEEEECCCCCCCCChHHHHHHHHHHHHHHHHHhCC
Confidence 0011123577899999999999999999999999988765 99999999998754467889999999999876433
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.80 E-value=4.4e-19 Score=161.23 Aligned_cols=180 Identities=13% Similarity=0.005 Sum_probs=126.2
Q ss_pred ceeEEEec---CCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCC---CCCCCC-----CCCCCHHHHH
Q 012188 171 CKFCTCWS---SSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFG---RSPKPT-----DSLYTVREHL 239 (468)
Q Consensus 171 ~~~~~~~~---~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G---~S~~~~-----~~~~t~~~~~ 239 (468)
.+.|..+. +++|+||++||++++...+..+.+.|. ++|.|+++|.+++. .+.... ....++.+.+
T Consensus 17 ~l~~~~~~~~~~~~p~vv~lHG~g~~~~~~~~~~~~l~----~~~~vv~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 92 (223)
T 3b5e_A 17 AFPYRLLGAGKESRECLFLLHGSGVDETTLVPLARRIA----PTATLVAARGRIPQEDGFRWFERIDPTRFEQKSILAET 92 (223)
T ss_dssp SSCEEEESTTSSCCCEEEEECCTTBCTTTTHHHHHHHC----TTSEEEEECCSEEETTEEESSCEEETTEECHHHHHHHH
T ss_pred CceEEEeCCCCCCCCEEEEEecCCCCHHHHHHHHHhcC----CCceEEEeCCCCCcCCccccccccCCCcccHHHHHHHH
Confidence 34444443 246899999999887665556777777 69999999988742 111000 0112334445
Q ss_pred HHHHHHHh----cccCC--ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCch
Q 012188 240 DMIEKSVI----EPNKV--KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPL 313 (468)
Q Consensus 240 ~di~~~l~----~~l~~--~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (468)
+++ ..++ +++++ ++++++||||||.+++.++.++|++++++|++++.......
T Consensus 93 ~~~-~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~-------------------- 151 (223)
T 3b5e_A 93 AAF-AAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDHV-------------------- 151 (223)
T ss_dssp HHH-HHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCSSC--------------------
T ss_pred HHH-HHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCcccc--------------------
Confidence 555 2333 33343 78999999999999999999999999999999976432000
Q ss_pred hhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhh
Q 012188 314 IAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVR 393 (468)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (468)
. ..
T Consensus 152 ---------------------------------------------------------------------~--------~~ 154 (223)
T 3b5e_A 152 ---------------------------------------------------------------------P--------AT 154 (223)
T ss_dssp ---------------------------------------------------------------------C--------CC
T ss_pred ---------------------------------------------------------------------c--------cc
Confidence 0 00
Q ss_pred ccCCCcEEEEeeCCCCccChhhHHHHHHhCC----CCeEEEecCCCccccccCcHHHHHHHHHHHHhhcC
Q 012188 394 NHVKCDVNVFHGEDDELIPVECSYNVQRKIP----RARVKVIEKKDHITIVVGRQKTFARELEEIWRSSS 459 (468)
Q Consensus 394 ~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p----~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~ 459 (468)
..+++|+++++|++|.++|.+.++ +.+.++ ++++++++ +||.... +. .+.+.+||++..
T Consensus 155 ~~~~~P~li~~G~~D~~v~~~~~~-~~~~l~~~g~~~~~~~~~-~gH~~~~-~~----~~~i~~~l~~~~ 217 (223)
T 3b5e_A 155 DLAGIRTLIIAGAADETYGPFVPA-LVTLLSRHGAEVDARIIP-SGHDIGD-PD----AAIVRQWLAGPI 217 (223)
T ss_dssp CCTTCEEEEEEETTCTTTGGGHHH-HHHHHHHTTCEEEEEEES-CCSCCCH-HH----HHHHHHHHHCC-
T ss_pred cccCCCEEEEeCCCCCcCCHHHHH-HHHHHHHCCCceEEEEec-CCCCcCH-HH----HHHHHHHHHhhh
Confidence 234789999999999999999988 887775 57899999 9999764 33 357888887654
|
| >2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon} | Back alignment and structure |
|---|
Probab=99.80 E-value=5.2e-19 Score=169.45 Aligned_cols=219 Identities=16% Similarity=0.059 Sum_probs=130.4
Q ss_pred CCeEEEEecCC---CCccchhhhhhhccccCCC-cceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCC--ce
Q 012188 181 SRDTLFVKTQG---PSAFWTETLFPNFSSASKS-TYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKV--KS 254 (468)
Q Consensus 181 ~p~vl~lHG~g---~s~~~~~~~~~~L~~~~~~-gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~--~~ 254 (468)
.|+||++||+| ++...+..+...|+ +. ||+|+++|+||+|.+..+.. ..+..+.++.+ ....+.+++ ++
T Consensus 73 ~p~vv~~HGgg~~~g~~~~~~~~~~~la---~~~g~~v~~~d~rg~g~~~~~~~-~~d~~~~~~~l-~~~~~~~~~d~~~ 147 (311)
T 2c7b_A 73 LPAVLYYHGGGFVFGSIETHDHICRRLS---RLSDSVVVSVDYRLAPEYKFPTA-VEDAYAALKWV-ADRADELGVDPDR 147 (311)
T ss_dssp EEEEEEECCSTTTSCCTGGGHHHHHHHH---HHHTCEEEEECCCCTTTSCTTHH-HHHHHHHHHHH-HHTHHHHTEEEEE
T ss_pred CcEEEEECCCcccCCChhhhHHHHHHHH---HhcCCEEEEecCCCCCCCCCCcc-HHHHHHHHHHH-HhhHHHhCCCchh
Confidence 47899999987 55554555677776 23 89999999999999865431 12333344444 344445565 68
Q ss_pred EEEEEEcccHHHHHHHHHhCCC----ccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhH
Q 012188 255 FHIVAHSLGCILALALAVKHPG----SVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRT 330 (468)
Q Consensus 255 i~lvGhS~Gg~ial~~a~~~p~----~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (468)
++++||||||.+++.++.++|+ .++++|+++|............... ..... ..+.
T Consensus 148 i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~-~~~~~-~~~~------------------ 207 (311)
T 2c7b_A 148 IAVAGDSAGGNLAAVVSILDRNSGEKLVKKQVLIYPVVNMTGVPTASLVEF-GVAET-TSLP------------------ 207 (311)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCCSSCCCHHHHHH-HHCTT-CSSC------------------
T ss_pred EEEEecCccHHHHHHHHHHHHhcCCCCceeEEEECCccCCccccccCCccH-HHhcc-CCCC------------------
Confidence 9999999999999999998876 5999999998765311110000000 00000 0000
Q ss_pred HHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCc
Q 012188 331 ICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDEL 410 (468)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~ 410 (468)
......+ ...+....... .. ..... ....+..+. |+++++|++|.+
T Consensus 208 ------------~~~~~~~---------~~~~~~~~~~~-~~----------~~~~p-~~~~l~~~~-P~lii~G~~D~~ 253 (311)
T 2c7b_A 208 ------------IELMVWF---------GRQYLKRPEEA-YD----------FKASP-LLADLGGLP-PALVVTAEYDPL 253 (311)
T ss_dssp ------------HHHHHHH---------HHHHCSSTTGG-GS----------TTTCG-GGSCCTTCC-CEEEEEETTCTT
T ss_pred ------------HHHHHHH---------HHHhCCCCccc-cC----------cccCc-ccccccCCC-cceEEEcCCCCc
Confidence 0000000 00000000000 00 00000 000123333 999999999999
Q ss_pred cChhh--HHHHHHhCCCCeEEEecCCCccccc----cCcHHHHHHHHHHHHhhc
Q 012188 411 IPVEC--SYNVQRKIPRARVKVIEKKDHITIV----VGRQKTFARELEEIWRSS 458 (468)
Q Consensus 411 vp~~~--~~~l~~~~p~~~l~~i~~~gH~~~~----~e~p~~~~~~i~~fl~~~ 458 (468)
++... .+.+.+..+++++++++|++|.... .++++++.+.+.+||++.
T Consensus 254 ~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 307 (311)
T 2c7b_A 254 RDEGELYAYKMKASGSRAVAVRFAGMVHGFVSFYPFVDAGREALDLAAASIRSG 307 (311)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCCEEEEEeCCCccccccccccCHHHHHHHHHHHHHHHHH
Confidence 87543 2445555567899999999998762 256789999999999874
|
| >2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A | Back alignment and structure |
|---|
Probab=99.80 E-value=2.1e-19 Score=174.47 Aligned_cols=222 Identities=13% Similarity=0.106 Sum_probs=130.0
Q ss_pred CCCeEEEEecCCC---Cccc--hhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcc-----
Q 012188 180 SSRDTLFVKTQGP---SAFW--TETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEP----- 249 (468)
Q Consensus 180 ~~p~vl~lHG~g~---s~~~--~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~----- 249 (468)
+.|+|||+||++. +..+ +..+...|+ .+.||.|+++|+||+|.+..+ ..+++..+.+ ..+.+.
T Consensus 82 ~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la--~~~g~~vv~~d~rg~~~~~~~----~~~~d~~~~~-~~l~~~~~~~~ 154 (338)
T 2o7r_A 82 KLPLVVYFHGGGFILFSAASTIFHDFCCEMA--VHAGVVIASVDYRLAPEHRLP----AAYDDAMEAL-QWIKDSRDEWL 154 (338)
T ss_dssp CEEEEEEECCSTTTSCCTTBHHHHHHHHHHH--HHHTCEEEEEECCCTTTTCTT----HHHHHHHHHH-HHHHTCCCHHH
T ss_pred CceEEEEEcCCcCcCCCCCchhHHHHHHHHH--HHCCcEEEEecCCCCCCCCCc----hHHHHHHHHH-HHHHhCCcchh
Confidence 3578999999773 2222 334555553 026999999999998876433 2455555555 455554
Q ss_pred ---cCCceEEEEEEcccHHHHHHHHHhCCC--------ccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhh
Q 012188 250 ---NKVKSFHIVAHSLGCILALALAVKHPG--------SVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGA 318 (468)
Q Consensus 250 ---l~~~~i~lvGhS~Gg~ial~~a~~~p~--------~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (468)
++.++++|+||||||.+|+.+|.++|+ +++++|+++|........ ... ... .....+...
T Consensus 155 ~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~~~~~~~~---~~~-~~~-~~~~~~~~~---- 225 (338)
T 2o7r_A 155 TNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPGFGGSKRT---GSE-LRL-ANDSRLPTF---- 225 (338)
T ss_dssp HHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCCCCCSSCC---HHH-HHT-TTCSSSCHH----
T ss_pred hccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCccCCCcCC---hhh-hcc-CCCcccCHH----
Confidence 344789999999999999999999998 899999999876442211 110 000 000000000
Q ss_pred hhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccc--hHHHhhccC
Q 012188 319 SMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDG--YLDAVRNHV 396 (468)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i 396 (468)
.. +...+.... ..... .... . ........ .+ ..+..+
T Consensus 226 ~~----------------------~~~~~~~~~--------~~~~~---~~~~--~-----~~~~~~~~~~~~-~~l~~~ 264 (338)
T 2o7r_A 226 VL----------------------DLIWELSLP--------MGADR---DHEY--C-----NPTAESEPLYSF-DKIRSL 264 (338)
T ss_dssp HH----------------------HHHHHHHSC--------TTCCT---TSTT--T-----CCC----CCTHH-HHHHHH
T ss_pred HH----------------------HHHHHHhCC--------CCCCC---CCcc--c-----CCCCCCcccccH-hhhcCC
Confidence 00 000000000 00000 0000 0 00000000 11 122445
Q ss_pred CCcEEEEeeCCCCccChh--hHHHHHHhCCCCeEEEecCCCccccccCcH---HHHHHHHHHHHhhcC
Q 012188 397 KCDVNVFHGEDDELIPVE--CSYNVQRKIPRARVKVIEKKDHITIVVGRQ---KTFARELEEIWRSSS 459 (468)
Q Consensus 397 ~~PvLii~G~~D~~vp~~--~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p---~~~~~~i~~fl~~~~ 459 (468)
.+|+|+++|++|.+++.. ..+.+.+..+++++++++++||..+. +++ +++.+.|.+||++..
T Consensus 265 ~~P~Lvi~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~g~gH~~~~-~~~~~~~~~~~~i~~Fl~~~~ 331 (338)
T 2o7r_A 265 GWRVMVVGCHGDPMIDRQMELAERLEKKGVDVVAQFDVGGYHAVKL-EDPEKAKQFFVILKKFVVDSC 331 (338)
T ss_dssp TCEEEEEEETTSTTHHHHHHHHHHHHHTTCEEEEEEESSCCTTGGG-TCHHHHHHHHHHHHHHHC---
T ss_pred CCCEEEEECCCCcchHHHHHHHHHHHHCCCcEEEEEECCCceEEec-cChHHHHHHHHHHHHHHHhhc
Confidence 779999999999998743 24455555567899999999998876 566 889999999997653
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.79 E-value=7.2e-19 Score=188.51 Aligned_cols=214 Identities=13% Similarity=0.082 Sum_probs=145.9
Q ss_pred CC-CceeEEEecCC-------CCeEEEEecCCCCc----cchh----hhhhhccccCCCcceEEEECCCCCCCCCCCCC-
Q 012188 168 DC-DCKFCTCWSSS-------SRDTLFVKTQGPSA----FWTE----TLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD- 230 (468)
Q Consensus 168 d~-~~~~~~~~~~~-------~p~vl~lHG~g~s~----~~~~----~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~- 230 (468)
|| ..+.+..+.+. .|+||++||++.+. .|.. .+.+.|+ ++||.|+++|+||+|.|..+..
T Consensus 496 ~g~~~l~~~~~~P~~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~~~~~~~~~l~---~~G~~v~~~d~rG~g~s~~~~~~ 572 (741)
T 2ecf_A 496 DGKTPLNYSVIKPAGFDPAKRYPVAVYVYGGPASQTVTDSWPGRGDHLFNQYLA---QQGYVVFSLDNRGTPRRGRDFGG 572 (741)
T ss_dssp TSSCEEEEEEECCSSCCTTSCEEEEEECCCSTTCCSCSSCCCCSHHHHHHHHHH---HTTCEEEEECCTTCSSSCHHHHH
T ss_pred CCCEEEEEEEEeCCCCCCCCCcCEEEEEcCCCCcccccccccccchhHHHHHHH---hCCCEEEEEecCCCCCCChhhhH
Confidence 66 67777777432 36899999988753 2331 2555554 4799999999999999753211
Q ss_pred ------CCCCHHHHHHHHHHHHhcc--cCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHH
Q 012188 231 ------SLYTVREHLDMIEKSVIEP--NKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVM 302 (468)
Q Consensus 231 ------~~~t~~~~~~di~~~l~~~--l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~ 302 (468)
..+.++++.+.+ ..+.++ ++.++++++||||||++++.++.++|++++++|+++|........
T Consensus 573 ~~~~~~~~~~~~d~~~~~-~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~-------- 643 (741)
T 2ecf_A 573 ALYGKQGTVEVADQLRGV-AWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGAPVTDWGLYD-------- 643 (741)
T ss_dssp TTTTCTTTHHHHHHHHHH-HHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCGGGSB--------
T ss_pred HHhhhcccccHHHHHHHH-HHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCCCceEEEEEcCCCcchhhhc--------
Confidence 112356666666 566665 344689999999999999999999999999999999865320000
Q ss_pred HhhcCCCCCchhhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhccc
Q 012188 303 RKVAPRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTA 382 (468)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (468)
. .+...+ . .... . . . ..+.
T Consensus 644 ---------------~---~~~~~~-------~-~~~~--~---------~-~-------------~~~~---------- 662 (741)
T 2ecf_A 644 ---------------S---HYTERY-------M-DLPA--R---------N-D-------------AGYR---------- 662 (741)
T ss_dssp ---------------H---HHHHHH-------H-CCTG--G---------G-H-------------HHHH----------
T ss_pred ---------------c---ccchhh-------c-CCcc--c---------C-h-------------hhhh----------
Confidence 0 000000 0 0000 0 0 0 0000
Q ss_pred ccccchHHHhhccCCCcEEEEeeCCCCccChhhHHHHHHhCCC----CeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 383 NKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPR----ARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 383 ~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~----~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
.......+.++++|+|+++|++|.++|++.++.+++.+++ .++++++++||..+. +.++++.+.+.+||++.
T Consensus 663 ---~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~-~~~~~~~~~i~~fl~~~ 738 (741)
T 2ecf_A 663 ---EARVLTHIEGLRSPLLLIHGMADDNVLFTNSTSLMSALQKRGQPFELMTYPGAKHGLSG-ADALHRYRVAEAFLGRC 738 (741)
T ss_dssp ---HHCSGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCSSCCH-HHHHHHHHHHHHHHHHH
T ss_pred ---hcCHHHHHhhCCCCEEEEccCCCCCCCHHHHHHHHHHHHHCCCceEEEEECCCCCCCCC-CchhHHHHHHHHHHHHh
Confidence 0000112357789999999999999999999988887753 499999999999986 66789999999999764
|
| >1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=5.5e-19 Score=173.19 Aligned_cols=120 Identities=10% Similarity=0.025 Sum_probs=84.7
Q ss_pred CCCceeEEEecC-----CCCeEEEEecCC---CCcc--chhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHH
Q 012188 168 DCDCKFCTCWSS-----SSRDTLFVKTQG---PSAF--WTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVRE 237 (468)
Q Consensus 168 d~~~~~~~~~~~-----~~p~vl~lHG~g---~s~~--~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~ 237 (468)
++.++.+..|.+ +.|+||++||++ ++.. .+..+...|+ +.||.|+++|+||+|.|+........+.|
T Consensus 91 ~g~~l~~~v~~p~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~la---~~g~~vv~~d~r~~gg~~~~~~~~~~~~D 167 (361)
T 1jkm_A 91 DGNEITLHVFRPAGVEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLA---AAGSVVVMVDFRNAWTAEGHHPFPSGVED 167 (361)
T ss_dssp TSCEEEEEEEEETTCCSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHH---HTTCEEEEEECCCSEETTEECCTTHHHHH
T ss_pred CCCeEEEEEEeCCCCCCCCeEEEEEcCCccccCCCcccchhHHHHHHH---hCCCEEEEEecCCCCCCCCCCCCCccHHH
Confidence 455677665522 237899999987 5554 4445666665 47999999999999766422222233444
Q ss_pred HHHHHH--HHHhcccCCceEEEEEEcccHHHHHHHHHh-----CCCccceEEEecCCCCC
Q 012188 238 HLDMIE--KSVIEPNKVKSFHIVAHSLGCILALALAVK-----HPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 238 ~~~di~--~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~-----~p~~v~~lVl~~p~~~~ 290 (468)
..+.+. ...++.++.++++|+|||+||.+++.++.. +|++++++|+++|....
T Consensus 168 ~~~~~~~v~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~il~~~~~~~ 227 (361)
T 1jkm_A 168 CLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISG 227 (361)
T ss_dssp HHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCC
T ss_pred HHHHHHHHHhhHHhcCCCeEEEEEECHHHHHHHHHHHHHHhcCCCcCcceEEEECCcccc
Confidence 444441 233344577899999999999999999998 88899999999987654
|
| >3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.79 E-value=3.8e-19 Score=164.04 Aligned_cols=194 Identities=11% Similarity=0.136 Sum_probs=132.8
Q ss_pred CCCeEEEEecCCCCccchhhhhhhccccCCCc---ceEEEECCCCCCCC--CC--------CC--------CCCC-CHHH
Q 012188 180 SSRDTLFVKTQGPSAFWTETLFPNFSSASKST---YRLFAIDLLGFGRS--PK--------PT--------DSLY-TVRE 237 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~g---y~Via~D~~G~G~S--~~--------~~--------~~~~-t~~~ 237 (468)
.++||||+||++++...|..+++.|. +++ ++|+.+|.+++|.+ .+ |. ...| ++++
T Consensus 3 ~~~pvv~iHG~~~~~~~~~~~~~~L~---~~~~~~~~vi~~~v~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~ 79 (250)
T 3lp5_A 3 RMAPVIMVPGSSASQNRFDSLITELG---KETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANIDK 79 (250)
T ss_dssp SCCCEEEECCCGGGHHHHHHHHHHHH---HHSSSCCCEEEEEECTTSCEEEEECCCTTCSSCEEEEEESCCCCSHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHH---hcCCCCceEEEEEEecCCeEEEeeecCCCCcCCeEEEEeccCCCcccCHHH
Confidence 35789999999998887777888887 234 78998888877763 11 10 0112 4556
Q ss_pred HHHHHH---HHHhcccCCceEEEEEEcccHHHHHHHHHhC-----CCccceEEEecCCCCCCCCCchhhHHHHHhhcCCC
Q 012188 238 HLDMIE---KSVIEPNKVKSFHIVAHSLGCILALALAVKH-----PGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRR 309 (468)
Q Consensus 238 ~~~di~---~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~-----p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~ 309 (468)
.++++. ..+.++++.++++++||||||.+++.++.++ |++|+++|+++++....... +..
T Consensus 80 ~a~~l~~~~~~l~~~~~~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~~------------~~~ 147 (250)
T 3lp5_A 80 QAVWLNTAFKALVKTYHFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMESTS------------TTA 147 (250)
T ss_dssp HHHHHHHHHHHHHTTSCCSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCCC------------SSC
T ss_pred HHHHHHHHHHHHHHHcCCCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCccccc------------ccc
Confidence 666662 3444556899999999999999999999988 67899999999887542211 000
Q ss_pred CCchhhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchH
Q 012188 310 VWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYL 389 (468)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (468)
. ...+. ... . .
T Consensus 148 ~----------~~~~~------------------------------~l~-~-------------------~--------- 158 (250)
T 3lp5_A 148 K----------TSMFK------------------------------ELY-R-------------------Y--------- 158 (250)
T ss_dssp C----------CHHHH------------------------------HHH-H-------------------T---------
T ss_pred c----------CHHHH------------------------------HHH-h-------------------c---------
Confidence 0 00000 000 0 0
Q ss_pred HHhhccCCCcEEEEeeC----CCCccChhhHHHHHHhCCC--Ce--EEEe--cCCCccccccCcHHHHHHHHHHHHhhcC
Q 012188 390 DAVRNHVKCDVNVFHGE----DDELIPVECSYNVQRKIPR--AR--VKVI--EKKDHITIVVGRQKTFARELEEIWRSSS 459 (468)
Q Consensus 390 ~~~~~~i~~PvLii~G~----~D~~vp~~~~~~l~~~~p~--~~--l~~i--~~~gH~~~~~e~p~~~~~~i~~fl~~~~ 459 (468)
...+.. ++|+++|+|+ .|.+||.+.++.+...+++ .. .+.+ ++++|..+. ++| ++.+.|.+||.+..
T Consensus 159 ~~~lp~-~vpvl~I~G~~~~~~Dg~Vp~~sa~~l~~l~~~~~~~~~~~~v~g~~a~H~~l~-e~~-~v~~~I~~FL~~~~ 235 (250)
T 3lp5_A 159 RTGLPE-SLTVYSIAGTENYTSDGTVPYNSVNYGKYIFQDQVKHFTEITVTGANTAHSDLP-QNK-QIVSLIRQYLLAET 235 (250)
T ss_dssp GGGSCT-TCEEEEEECCCCCCTTTBCCHHHHTTHHHHHTTTSSEEEEEECTTTTBSSCCHH-HHH-HHHHHHHHHTSCCC
T ss_pred cccCCC-CceEEEEEecCCCCCCceeeHHHHHHHHHHhcccccceEEEEEeCCCCchhcch-hCH-HHHHHHHHHHhccc
Confidence 000122 7999999999 9999999999888777764 23 2334 357799997 787 89999999997654
Q ss_pred C
Q 012188 460 G 460 (468)
Q Consensus 460 ~ 460 (468)
.
T Consensus 236 ~ 236 (250)
T 3lp5_A 236 M 236 (250)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A | Back alignment and structure |
|---|
Probab=99.79 E-value=3.7e-18 Score=159.29 Aligned_cols=190 Identities=16% Similarity=0.113 Sum_probs=115.4
Q ss_pred CCCCceeEEEec----CCCCeEEEEecCCCCcc--chhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCC--------
Q 012188 167 SDCDCKFCTCWS----SSSRDTLFVKTQGPSAF--WTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSL-------- 232 (468)
Q Consensus 167 ~d~~~~~~~~~~----~~~p~vl~lHG~g~s~~--~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~-------- 232 (468)
.||..+...-|. ++.|.||++||++++.. .+..+.+.|+ ++||.|+++|+||||.|.......
T Consensus 38 ~dG~~i~g~l~~P~~~~~~p~Vl~~HG~g~~~~~~~~~~~a~~la---~~Gy~Vl~~D~rG~G~s~~~~~~~~~~~~~~~ 114 (259)
T 4ao6_A 38 VDGRTVPGVYWSPAEGSSDRLVLLGHGGTTHKKVEYIEQVAKLLV---GRGISAMAIDGPGHGERASVQAGREPTDVVGL 114 (259)
T ss_dssp ETTEEEEEEEEEESSSCCSEEEEEEC--------CHHHHHHHHHH---HTTEEEEEECCCC-------------CCGGGS
T ss_pred eCCeEEEEEEEeCCCCCCCCEEEEeCCCcccccchHHHHHHHHHH---HCCCeEEeeccCCCCCCCCcccccccchhhhh
Confidence 366667666662 33467899999987643 2334555555 689999999999999986433200
Q ss_pred C----------CHHHHHHHHH---HHHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhH
Q 012188 233 Y----------TVREHLDMIE---KSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQ 299 (468)
Q Consensus 233 ~----------t~~~~~~di~---~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~ 299 (468)
. .....+.+.. ..+....+.+++.++|+||||.+++.++...|. +++.|+..+.......
T Consensus 115 ~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~~d~~rv~~~G~S~GG~~a~~~a~~~pr-i~Aav~~~~~~~~~~~------ 187 (259)
T 4ao6_A 115 DAFPRMWHEGGGTAAVIADWAAALDFIEAEEGPRPTGWWGLSMGTMMGLPVTASDKR-IKVALLGLMGVEGVNG------ 187 (259)
T ss_dssp TTHHHHHHHTTHHHHHHHHHHHHHHHHHHHHCCCCEEEEECTHHHHHHHHHHHHCTT-EEEEEEESCCTTSTTH------
T ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHHhhhccCCceEEEEeechhHHHHHHHHhcCCc-eEEEEEeccccccccc------
Confidence 0 0111112220 233344566899999999999999999999984 6666655433211000
Q ss_pred HHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHh
Q 012188 300 YVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIIC 379 (468)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (468)
T Consensus 188 -------------------------------------------------------------------------------- 187 (259)
T 4ao6_A 188 -------------------------------------------------------------------------------- 187 (259)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccchHHHhhccCCCcEEEEeeCCCCccChhhHHHHHHhCC--CCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 380 GTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIP--RARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 380 ~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p--~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
........++++|+|++||++|.++|++.++.+++.++ +.+++++++ +|... ...+..+.+.+||++
T Consensus 188 -------~~~~~~a~~i~~P~Li~hG~~D~~vp~~~~~~l~~al~~~~k~l~~~~G-~H~~~---p~~e~~~~~~~fl~~ 256 (259)
T 4ao6_A 188 -------EDLVRLAPQVTCPVRYLLQWDDELVSLQSGLELFGKLGTKQKTLHVNPG-KHSAV---PTWEMFAGTVDYLDQ 256 (259)
T ss_dssp -------HHHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCCSSEEEEEESS-CTTCC---CHHHHTHHHHHHHHH
T ss_pred -------cchhhhhccCCCCEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEeCC-CCCCc---CHHHHHHHHHHHHHH
Confidence 00011125779999999999999999999999999885 457888886 66533 224566777788875
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.78 E-value=1.1e-18 Score=186.37 Aligned_cols=202 Identities=11% Similarity=0.073 Sum_probs=137.0
Q ss_pred CCeEEEEecCCCCc----cch-hhhhhhccccCCCcceEEEECCCCCCCCC-------CCCCCCCCHHHHHHHHHHHHhc
Q 012188 181 SRDTLFVKTQGPSA----FWT-ETLFPNFSSASKSTYRLFAIDLLGFGRSP-------KPTDSLYTVREHLDMIEKSVIE 248 (468)
Q Consensus 181 ~p~vl~lHG~g~s~----~~~-~~~~~~L~~~~~~gy~Via~D~~G~G~S~-------~~~~~~~t~~~~~~di~~~l~~ 248 (468)
.|+||++||++.+. .|. ......++ ++||.|+++|+||+|.+. ........++++.+.+ ..+.+
T Consensus 496 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~---~~G~~vv~~d~rG~g~~g~~~~~~~~~~~~~~~~~d~~~~~-~~l~~ 571 (723)
T 1xfd_A 496 YPLLLVVDGTPGSQSVAEKFEVSWETVMVS---SHGAVVVKCDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAV-RTMLK 571 (723)
T ss_dssp EEEEEECCCCTTCCCCCCCCCCSHHHHHHH---TTCCEEECCCCTTCSSSHHHHHHTTTTCTTTHHHHHHHHHH-HHHHS
T ss_pred cCEEEEEcCCCCccccCccccccHHHHHhh---cCCEEEEEECCCCCccccHHHHHHHHhccCcccHHHHHHHH-HHHHh
Confidence 37899999988752 222 12233443 479999999999999852 1111234567777777 56665
Q ss_pred cc--CCceEEEEEEcccHHHHHHHHHhC----CCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHH
Q 012188 249 PN--KVKSFHIVAHSLGCILALALAVKH----PGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMAC 322 (468)
Q Consensus 249 ~l--~~~~i~lvGhS~Gg~ial~~a~~~----p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (468)
.. +.++++|+||||||++++.++.++ |++++++|+++|........ ..
T Consensus 572 ~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~--------------------------~~ 625 (723)
T 1xfd_A 572 EQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYA--------------------------SA 625 (723)
T ss_dssp SSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSSB--------------------------HH
T ss_pred CCCcChhhEEEEEECHHHHHHHHHHHhccccCCCeEEEEEEccCCcchHHhh--------------------------hh
Confidence 52 346899999999999999999999 99999999999865431100 00
Q ss_pred HHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCC-CcEE
Q 012188 323 WYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVK-CDVN 401 (468)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~PvL 401 (468)
+.+. ++ ..... .... .........+.+++ +|+|
T Consensus 626 ~~~~------------------------------~~-~~~~~--~~~~-------------~~~~~~~~~~~~~~~~P~l 659 (723)
T 1xfd_A 626 FSER------------------------------YL-GLHGL--DNRA-------------YEMTKVAHRVSALEEQQFL 659 (723)
T ss_dssp HHHH------------------------------HH-CCCSS--CCSS-------------TTTTCTHHHHTSCCSCEEE
T ss_pred ccHh------------------------------hc-CCccC--ChhH-------------HHhcChhhHHhhcCCCCEE
Confidence 0000 00 00000 0000 00001112346778 8999
Q ss_pred EEeeCCCCccChhhHHHHHHhC----CCCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 402 VFHGEDDELIPVECSYNVQRKI----PRARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 402 ii~G~~D~~vp~~~~~~l~~~~----p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
++||++|..+|++.++.+.+.+ +++++++++++||.....++++++.+.+.+||++.
T Consensus 660 ii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 720 (723)
T 1xfd_A 660 IIHPTADEKIHFQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSIINFFVEC 720 (723)
T ss_dssp EEEETTCSSSCHHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHHHHHTTT
T ss_pred EEEeCCCCCcCHhHHHHHHHHHHHCCCCeEEEEECCCCcccccCcchHHHHHHHHHHHHHH
Confidence 9999999999999988887766 46799999999999843478999999999999764
|
| >1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A | Back alignment and structure |
|---|
Probab=99.78 E-value=2.5e-18 Score=165.71 Aligned_cols=103 Identities=14% Similarity=0.106 Sum_probs=75.2
Q ss_pred CCCeEEEEecCC---CCccchhhhhhhccccCC-CcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHh---cccCC
Q 012188 180 SSRDTLFVKTQG---PSAFWTETLFPNFSSASK-STYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVI---EPNKV 252 (468)
Q Consensus 180 ~~p~vl~lHG~g---~s~~~~~~~~~~L~~~~~-~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~---~~l~~ 252 (468)
+.|+||++||++ ++...+..+...|. + .||.|+++|+||+|.+..+. ..++..+.+ ..+. +.+++
T Consensus 78 ~~p~vv~~HGgg~~~g~~~~~~~~~~~la---~~~G~~Vv~~d~rg~~~~~~~~----~~~d~~~~~-~~l~~~~~~~~~ 149 (323)
T 1lzl_A 78 PVPVLLWIHGGGFAIGTAESSDPFCVEVA---RELGFAVANVEYRLAPETTFPG----PVNDCYAAL-LYIHAHAEELGI 149 (323)
T ss_dssp CEEEEEEECCSTTTSCCGGGGHHHHHHHH---HHHCCEEEEECCCCTTTSCTTH----HHHHHHHHH-HHHHHTHHHHTE
T ss_pred CCcEEEEECCCccccCChhhhHHHHHHHH---HhcCcEEEEecCCCCCCCCCCc----hHHHHHHHH-HHHHhhHHHcCC
Confidence 347899999987 55544444666665 2 38999999999999986543 233333333 2333 34555
Q ss_pred --ceEEEEEEcccHHHHHHHHHhCCC----ccceEEEecCCCCC
Q 012188 253 --KSFHIVAHSLGCILALALAVKHPG----SVKSLTLLAPPYYP 290 (468)
Q Consensus 253 --~~i~lvGhS~Gg~ial~~a~~~p~----~v~~lVl~~p~~~~ 290 (468)
++++|+||||||.+++.++.++|+ .++++|+++|....
T Consensus 150 d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~ 193 (323)
T 1lzl_A 150 DPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDD 193 (323)
T ss_dssp EEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCCT
T ss_pred ChhheEEEecCchHHHHHHHHHHHhhcCCCCeeEEEEECCccCC
Confidence 689999999999999999998776 49999999987654
|
| >3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A | Back alignment and structure |
|---|
Probab=99.78 E-value=3.5e-18 Score=164.77 Aligned_cols=215 Identities=11% Similarity=0.025 Sum_probs=127.2
Q ss_pred CCCeEEEEecCC---CCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhc---cc-CC
Q 012188 180 SSRDTLFVKTQG---PSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIE---PN-KV 252 (468)
Q Consensus 180 ~~p~vl~lHG~g---~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~---~l-~~ 252 (468)
+.|+|||+||+| ++...+..+...|+. +.||+|+++|+||+|.+..+. .+++..+.+ ..+.+ .+ +.
T Consensus 89 ~~p~vv~~HGGg~~~g~~~~~~~~~~~La~--~~g~~Vv~~Dyrg~~~~~~p~----~~~d~~~~~-~~l~~~~~~lgd~ 161 (323)
T 3ain_A 89 PYGVLVYYHGGGFVLGDIESYDPLCRAITN--SCQCVTISVDYRLAPENKFPA----AVVDSFDAL-KWVYNNSEKFNGK 161 (323)
T ss_dssp CCCEEEEECCSTTTSCCTTTTHHHHHHHHH--HHTSEEEEECCCCTTTSCTTH----HHHHHHHHH-HHHHHTGGGGTCT
T ss_pred CCcEEEEECCCccccCChHHHHHHHHHHHH--hcCCEEEEecCCCCCCCCCcc----hHHHHHHHH-HHHHHhHHHhCCC
Confidence 458999999965 444444456777761 129999999999999886443 344444444 34443 34 46
Q ss_pred ceEEEEEEcccHHHHHHHHHhCCCcc---ceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhh
Q 012188 253 KSFHIVAHSLGCILALALAVKHPGSV---KSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISR 329 (468)
Q Consensus 253 ~~i~lvGhS~Gg~ial~~a~~~p~~v---~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (468)
++++|+||||||.+|+.+|.++|+++ +++|+++|........ ..... ......+.. ..
T Consensus 162 ~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~vl~~p~~~~~~~~----~~~~~-~~~~~~l~~-----~~--------- 222 (323)
T 3ain_A 162 YGIAVGGDSAGGNLAAVTAILSKKENIKLKYQVLIYPAVSFDLIT----KSLYD-NGEGFFLTR-----EH--------- 222 (323)
T ss_dssp TCEEEEEETHHHHHHHHHHHHHHHTTCCCSEEEEESCCCSCCSCC----HHHHH-HSSSSSSCH-----HH---------
T ss_pred ceEEEEecCchHHHHHHHHHHhhhcCCCceeEEEEeccccCCCCC----ccHHH-hccCCCCCH-----HH---------
Confidence 78999999999999999999998876 8999999876442211 00000 000000000 00
Q ss_pred HHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCC
Q 012188 330 TICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDE 409 (468)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~ 409 (468)
.... ...+....... .. ........ .+..+ .|+++++|++|.
T Consensus 223 ------------~~~~-------------~~~~~~~~~~~-~~----------~~~sp~~~-~l~~l-~P~lii~G~~D~ 264 (323)
T 3ain_A 223 ------------IDWF-------------GQQYLRSFADL-LD----------FRFSPILA-DLNDL-PPALIITAEHDP 264 (323)
T ss_dssp ------------HHHH-------------HHHHCSSGGGG-GC----------TTTCGGGS-CCTTC-CCEEEEEETTCT
T ss_pred ------------HHHH-------------HHHhCCCCccc-CC----------cccCcccC-cccCC-CHHHEEECCCCc
Confidence 0000 00000000000 00 00000000 11232 399999999999
Q ss_pred ccC--hhhHHHHHHhCCCCeEEEecCCCccccc----cCcHHHHHHHHHHHHhhc
Q 012188 410 LIP--VECSYNVQRKIPRARVKVIEKKDHITIV----VGRQKTFARELEEIWRSS 458 (468)
Q Consensus 410 ~vp--~~~~~~l~~~~p~~~l~~i~~~gH~~~~----~e~p~~~~~~i~~fl~~~ 458 (468)
+++ ...++.+.+.-+++++++++|++|..+. .+.++++.+.+.+||++.
T Consensus 265 l~~~~~~~a~~l~~ag~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 319 (323)
T 3ain_A 265 LRDQGEAYANKLLQSGVQVTSVGFNNVIHGFVSFFPFIEQGRDAIGLIGYVLRKV 319 (323)
T ss_dssp THHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCCEEEEEECCCccccccccCcCHHHHHHHHHHHHHHHHH
Confidence 984 1223334444456799999999999775 145689999999999763
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=99.78 E-value=3.2e-18 Score=165.50 Aligned_cols=226 Identities=11% Similarity=0.055 Sum_probs=141.2
Q ss_pred cCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceEEE
Q 012188 178 SSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHI 257 (468)
Q Consensus 178 ~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i~l 257 (468)
.+++|+++++||++++...|..+.+.|. .+|+|+++|+||||.+..+. .+++++++++...+.+..+.++++|
T Consensus 98 ~g~~~~l~~lhg~~~~~~~~~~l~~~L~----~~~~v~~~d~~g~~~~~~~~---~~~~~~a~~~~~~i~~~~~~~~~~l 170 (329)
T 3tej_A 98 EGNGPTLFCFHPASGFAWQFSVLSRYLD----PQWSIIGIQSPRPNGPMQTA---ANLDEVCEAHLATLLEQQPHGPYYL 170 (329)
T ss_dssp CCSSCEEEEECCTTSCCGGGGGGGGTSC----TTCEEEEECCCTTTSHHHHC---SSHHHHHHHHHHHHHHHCSSSCEEE
T ss_pred CCCCCcEEEEeCCcccchHHHHHHHhcC----CCCeEEEeeCCCCCCCCCCC---CCHHHHHHHHHHHHHHhCCCCCEEE
Confidence 4567899999999887776667777776 89999999999999875432 4899999987444544456679999
Q ss_pred EEEcccHHHHHHHHHh---CCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHH
Q 012188 258 VAHSLGCILALALAVK---HPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLL 334 (468)
Q Consensus 258 vGhS~Gg~ial~~a~~---~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (468)
+||||||.+|+.+|.+ +|++|.+++++++........ ...... .... ... ..+.+.....
T Consensus 171 ~G~S~Gg~ia~~~a~~L~~~~~~v~~lvl~d~~~~~~~~~---~~~~~~------~~~~----~~~----~~~~~~~~~~ 233 (329)
T 3tej_A 171 LGYSLGGTLAQGIAARLRARGEQVAFLGLLDTWPPETQNW---QEKEAN------GLDP----EVL----AEINREREAF 233 (329)
T ss_dssp EEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCTHHHHT---C-----------CCCC----THH----HHHHHHHHHH
T ss_pred EEEccCHHHHHHHHHHHHhcCCcccEEEEeCCCCCCcccc---cccccc------ccCh----hhH----HHHHHHHHHH
Confidence 9999999999999999 999999999999764320000 000000 0000 000 0000000000
Q ss_pred hhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChh
Q 012188 335 ICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVE 414 (468)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~ 414 (468)
... . ...........+...+.........+ ....+++|++++.|++|...+.+
T Consensus 234 ~~~-----------------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~pv~l~~~~~d~~~~~~ 286 (329)
T 3tej_A 234 LAA-----------------------Q-QGSTSTELFTTIEGNYADAVRLLTTA---HSVPFDGKATLFVAERTLQEGMS 286 (329)
T ss_dssp HHT-----------------------T-CCCSCCHHHHHHHHHHHHHHHHHTTC---CCCCEEEEEEEEEEGGGCCTTCC
T ss_pred HHh-----------------------c-cccccHHHHHHHHHHHHHHHHHHhcC---CCCCcCCCeEEEEeccCCCCCCC
Confidence 000 0 00000000000000000000000000 01356899999999999888777
Q ss_pred hHHHHHHhCCCCeEEEecCCCccccccCcH--HHHHHHHHHHHh
Q 012188 415 CSYNVQRKIPRARVKVIEKKDHITIVVGRQ--KTFARELEEIWR 456 (468)
Q Consensus 415 ~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p--~~~~~~i~~fl~ 456 (468)
....+.+..++.+++.++ +||+.++ +.| +.+.+.|.+||+
T Consensus 287 ~~~~w~~~~~~~~~~~v~-g~H~~~~-~~~~~~~ia~~l~~~L~ 328 (329)
T 3tej_A 287 PERAWSPWIAELDIYRQD-CAHVDII-SPGTFEKIGPIIRATLN 328 (329)
T ss_dssp HHHHHTTTEEEEEEEEES-SCGGGGG-STTTHHHHHHHHHHHHC
T ss_pred chhhHHHhcCCcEEEEec-CChHHhC-CChHHHHHHHHHHHHhc
Confidence 667777777888999998 6999887 555 889999999985
|
| >3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.77 E-value=5.6e-18 Score=156.22 Aligned_cols=204 Identities=14% Similarity=0.102 Sum_probs=131.6
Q ss_pred CCCeEEEEecCCCCccchhhhhhhccccCCCcc--eEEEECCCCCCCCCCC--C---------------CCCCCHHHHHH
Q 012188 180 SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTY--RLFAIDLLGFGRSPKP--T---------------DSLYTVREHLD 240 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy--~Via~D~~G~G~S~~~--~---------------~~~~t~~~~~~ 240 (468)
+++||||+||++++...|..+.+.|. +.|| +|+.+|.+++|.+... . ....++.++++
T Consensus 5 ~~~pvvliHG~~~~~~~~~~l~~~L~---~~g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~ 81 (249)
T 3fle_A 5 KTTATLFLHGYGGSERSETFMVKQAL---NKNVTNEVITARVSSEGKVYFDKKLSEDAANPIVKVEFKDNKNGNFKENAY 81 (249)
T ss_dssp CCEEEEEECCTTCCGGGTHHHHHHHH---TTTSCSCEEEEEECSSCCEEESSCCC--CCSCEEEEEESSTTCCCHHHHHH
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHH---HcCCCceEEEEEECCCCCEEEccccccccCCCeEEEEcCCCCCccHHHHHH
Confidence 45799999999988776667888887 4564 7999999999875211 0 01123333333
Q ss_pred HH---HHHHhcccCCceEEEEEEcccHHHHHHHHHhCCC-----ccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCc
Q 012188 241 MI---EKSVIEPNKVKSFHIVAHSLGCILALALAVKHPG-----SVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWP 312 (468)
Q Consensus 241 di---~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~-----~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (468)
++ ...+.++++.+++.++||||||.+++.++.++|+ +|+++|+++++............ . ..+... ..|
T Consensus 82 ~l~~~i~~l~~~~~~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~~~-~-~~~~~~-g~p 158 (249)
T 3fle_A 82 WIKEVLSQLKSQFGIQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMNENVN-E-IIVDKQ-GKP 158 (249)
T ss_dssp HHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTSSCTT-T-SCBCTT-CCB
T ss_pred HHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCcccccCCcc-h-hhhccc-CCC
Confidence 33 2456677899999999999999999999999974 79999999988754211100000 0 000000 000
Q ss_pred hhhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHh
Q 012188 313 LIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAV 392 (468)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (468)
. .. ...+.. + ... ...
T Consensus 159 -~----~~------------------------------~~~~~~-----------------l-----------~~~-~~~ 174 (249)
T 3fle_A 159 -S----RM------------------------------NAAYRQ-----------------L-----------LSL-YKI 174 (249)
T ss_dssp -S----SC------------------------------CHHHHH-----------------T-----------GGG-HHH
T ss_pred -c----cc------------------------------CHHHHH-----------------H-----------HHH-Hhh
Confidence 0 00 000000 0 000 111
Q ss_pred hccCCCcEEEEeeC------CCCccChhhHHHHHHhCCCC----eEEEecC--CCccccccCcHHHHHHHHHHHH
Q 012188 393 RNHVKCDVNVFHGE------DDELIPVECSYNVQRKIPRA----RVKVIEK--KDHITIVVGRQKTFARELEEIW 455 (468)
Q Consensus 393 ~~~i~~PvLii~G~------~D~~vp~~~~~~l~~~~p~~----~l~~i~~--~gH~~~~~e~p~~~~~~i~~fl 455 (468)
++..++|+|.|+|+ .|..||...++.+...+++. +.+++.| +.|..+. +++ ++.+.|.+||
T Consensus 175 ~p~~~~~vl~I~G~~~~~~~sDG~V~~~Sa~~~~~l~~~~~~~y~e~~v~g~~a~Hs~l~-~n~-~V~~~I~~FL 247 (249)
T 3fle_A 175 YCGKEIEVLNIYGDLEDGSHSDGRVSNSSSQSLQYLLRGSTKSYQEMKFKGAKAQHSQLH-ENK-DVANEIIQFL 247 (249)
T ss_dssp HTTTTCEEEEEEEECCSSSCBSSSSBHHHHHTHHHHSTTCSSEEEEEEEESGGGSTGGGG-GCH-HHHHHHHHHH
T ss_pred CCccCCeEEEEeccCCCCCCCCCcccHHHHHHHHHHHhhCCCceEEEEEeCCCCchhccc-cCH-HHHHHHHHHh
Confidence 23358999999998 69999999998877777643 4455655 8999997 666 8888888887
|
| >1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=6.9e-19 Score=168.80 Aligned_cols=218 Identities=14% Similarity=0.118 Sum_probs=131.2
Q ss_pred CCCCeEEEEecCC---CCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCc--
Q 012188 179 SSSRDTLFVKTQG---PSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVK-- 253 (468)
Q Consensus 179 ~~~p~vl~lHG~g---~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~-- 253 (468)
++.|+||++||++ ++...+..+...|+. +.||.|+++|+||+|.|+.+.. ..+..+.++.+ ...++.++++
T Consensus 77 ~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~--~~g~~Vv~~dyrg~g~~~~p~~-~~d~~~~~~~l-~~~~~~~~~d~~ 152 (311)
T 1jji_A 77 PDSPVLVYYHGGGFVICSIESHDALCRRIAR--LSNSTVVSVDYRLAPEHKFPAA-VYDCYDATKWV-AENAEELRIDPS 152 (311)
T ss_dssp SSEEEEEEECCSTTTSCCTGGGHHHHHHHHH--HHTSEEEEEECCCTTTSCTTHH-HHHHHHHHHHH-HHTHHHHTEEEE
T ss_pred CCceEEEEECCcccccCChhHhHHHHHHHHH--HhCCEEEEecCCCCCCCCCCCc-HHHHHHHHHHH-HhhHHHhCCCch
Confidence 3457899999988 555444456666641 2599999999999999976542 22344444555 3445556665
Q ss_pred eEEEEEEcccHHHHHHHHHhCCCc----cceEEEecCCCCCCCCCchhhHHHHHhhcCCCC-CchhhhhhhhHHHHHHHh
Q 012188 254 SFHIVAHSLGCILALALAVKHPGS----VKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRV-WPLIAFGASMACWYEHIS 328 (468)
Q Consensus 254 ~i~lvGhS~Gg~ial~~a~~~p~~----v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 328 (468)
+++|+|||+||.+|+.++.++|++ ++++|+++|........ ..... ...... +. .....+
T Consensus 153 ~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~----~~~~~-~~~~~~~~~-----~~~~~~----- 217 (311)
T 1jji_A 153 KIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVAPT----PSLLE-FGEGLWILD-----QKIMSW----- 217 (311)
T ss_dssp EEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCSSSCC----HHHHH-TSSSCSSCC-----HHHHHH-----
T ss_pred hEEEEEeCHHHHHHHHHHHHHHhcCCCCceEEEEeCCccCCCCCC----ccHHH-hcCCCccCC-----HHHHHH-----
Confidence 899999999999999999988776 99999999876542211 11110 000000 00 000000
Q ss_pred hHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCC
Q 012188 329 RTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDD 408 (468)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D 408 (468)
.. ..+..... ..... ...... ..+..+ .|+++++|++|
T Consensus 218 ----------------~~-------------~~~~~~~~-~~~~~----------~~~p~~-~~l~~~-~P~li~~G~~D 255 (311)
T 1jji_A 218 ----------------FS-------------EQYFSREE-DKFNP----------LASVIF-ADLENL-PPALIITAEYD 255 (311)
T ss_dssp ----------------HH-------------HHHCSSGG-GGGCT----------TTSGGG-SCCTTC-CCEEEEEEEEC
T ss_pred ----------------HH-------------HHhCCCCc-cCCCc----------ccCccc-ccccCC-ChheEEEcCcC
Confidence 00 00000000 00000 000000 111232 49999999999
Q ss_pred CccChh--hHHHHHHhCCCCeEEEecCCCcccccc----CcHHHHHHHHHHHHhh
Q 012188 409 ELIPVE--CSYNVQRKIPRARVKVIEKKDHITIVV----GRQKTFARELEEIWRS 457 (468)
Q Consensus 409 ~~vp~~--~~~~l~~~~p~~~l~~i~~~gH~~~~~----e~p~~~~~~i~~fl~~ 457 (468)
.+++.. .++.+.+..+++++++++|++|..... +..+++.+.+.+||++
T Consensus 256 ~l~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 310 (311)
T 1jji_A 256 PLRDEGEVFGQMLRRAGVEASIVRYRGVLHGFINYYPVLKAARDAINQIAALLVF 310 (311)
T ss_dssp TTHHHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHC
T ss_pred cchHHHHHHHHHHHHcCCCEEEEEECCCCeeccccCCcCHHHHHHHHHHHHHHhh
Confidence 998633 235555555788999999999977641 3457889999999975
|
| >3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A | Back alignment and structure |
|---|
Probab=99.77 E-value=6e-18 Score=163.10 Aligned_cols=215 Identities=13% Similarity=0.070 Sum_probs=130.7
Q ss_pred CCCCe-EEEEecCC---CCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcc-cCCc
Q 012188 179 SSSRD-TLFVKTQG---PSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEP-NKVK 253 (468)
Q Consensus 179 ~~~p~-vl~lHG~g---~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~-l~~~ 253 (468)
+++|+ ||++||+| ++...+..+...|.. +.||.|+++|+|+++.+..+ ..++|..+.+ ..+++. ++.+
T Consensus 77 ~~~~~~vv~~HGgg~~~g~~~~~~~~~~~la~--~~g~~v~~~dyr~~~~~~~~----~~~~d~~~a~-~~l~~~~~~~~ 149 (322)
T 3k6k_A 77 GAGAAHILYFHGGGYISGSPSTHLVLTTQLAK--QSSATLWSLDYRLAPENPFP----AAVDDCVAAY-RALLKTAGSAD 149 (322)
T ss_dssp TCCSCEEEEECCSTTTSCCHHHHHHHHHHHHH--HHTCEEEEECCCCTTTSCTT----HHHHHHHHHH-HHHHHHHSSGG
T ss_pred CCCCeEEEEEcCCcccCCChHHHHHHHHHHHH--hcCCEEEEeeCCCCCCCCCc----hHHHHHHHHH-HHHHHcCCCCc
Confidence 34567 99999977 444444445666651 13999999999998876543 2466666666 567666 6667
Q ss_pred eEEEEEEcccHHHHHHHHHhCCCc----cceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhh
Q 012188 254 SFHIVAHSLGCILALALAVKHPGS----VKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISR 329 (468)
Q Consensus 254 ~i~lvGhS~Gg~ial~~a~~~p~~----v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (468)
+++|+|||+||.+|+.++.++|+. ++++|+++|........ . .............
T Consensus 150 ~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~---~-~~~~~~~~~~~~~----------------- 208 (322)
T 3k6k_A 150 RIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLSPFVDLTLSR---W-SNSNLADRDFLAE----------------- 208 (322)
T ss_dssp GEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCS---H-HHHHTGGGCSSSC-----------------
T ss_pred cEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEecCCcCcccCc---c-chhhccCCCCcCC-----------------
Confidence 999999999999999999998876 99999999877543221 0 0000000000000
Q ss_pred HHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCC
Q 012188 330 TICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDE 409 (468)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~ 409 (468)
......+ ...+........ ..... +... .....|+|+++|++|.
T Consensus 209 -------------~~~~~~~----~~~~~~~~~~~~-----------------~~~sp-~~~~-~~~~pP~li~~G~~D~ 252 (322)
T 3k6k_A 209 -------------PDTLGEM----SELYVGGEDRKN-----------------PLISP-VYAD-LSGLPEMLIHVGSEEA 252 (322)
T ss_dssp -------------HHHHHHH----HHHHHTTSCTTC-----------------TTTCG-GGSC-CTTCCCEEEEEESSCT
T ss_pred -------------HHHHHHH----HHHhcCCCCCCC-----------------CcCCc-cccc-ccCCCcEEEEECCcCc
Confidence 0000000 000000000000 00000 0000 1223699999999998
Q ss_pred ccChhhHHHHHHhC----CCCeEEEecCCCccccc----cCcHHHHHHHHHHHHhhcC
Q 012188 410 LIPVECSYNVQRKI----PRARVKVIEKKDHITIV----VGRQKTFARELEEIWRSSS 459 (468)
Q Consensus 410 ~vp~~~~~~l~~~~----p~~~l~~i~~~gH~~~~----~e~p~~~~~~i~~fl~~~~ 459 (468)
++ ..+..+.+.+ .++++++++|++|.... .+.++++.+.+.+||++.-
T Consensus 253 ~~--~~~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l 308 (322)
T 3k6k_A 253 LL--SDSTTLAERAGAAGVSVELKIWPDMPHVFQMYGKFVNAADISIKEICHWISARI 308 (322)
T ss_dssp TH--HHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHTTC
T ss_pred cH--HHHHHHHHHHHHCCCCEEEEEECCCccccccccccChHHHHHHHHHHHHHHHHH
Confidence 85 3445544443 45699999999998654 1457899999999998853
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.77 E-value=9.8e-18 Score=155.93 Aligned_cols=208 Identities=13% Similarity=0.136 Sum_probs=132.2
Q ss_pred CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCC------CC----CCC------CCCCCCHHHHHHHHH
Q 012188 180 SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFG------RS----PKP------TDSLYTVREHLDMIE 243 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G------~S----~~~------~~~~~t~~~~~~di~ 243 (468)
+++||||+||++++...|..+++.|.........++++|..++| .+ ..+ ....++++++++++.
T Consensus 2 ~~~pvvllHG~~~~~~~~~~l~~~L~~~~~~~~~~~~~~v~~~G~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~ 81 (254)
T 3ds8_A 2 DQIPIILIHGSGGNASSLDKMADQLMNEYRSSNEALTMTVNSEGKIKFEGKLTKDAKRPIIKFGFEQNQATPDDWSKWLK 81 (254)
T ss_dssp CCCCEEEECCTTCCTTTTHHHHHHHHHTTCCCCCEEEEEEETTTEEEEESCCCTTCSSCEEEEEESSTTSCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCcchHHHHHHHHHHhcCCCceEEEEEEcCCCeEEEEEEeccCCCCCEEEEEecCCCCCHHHHHHHHH
Confidence 46789999999988776667888887211111234443333332 22 222 023468888888872
Q ss_pred ---HHHhcccCCceEEEEEEcccHHHHHHHHHhCCC-----ccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhh
Q 012188 244 ---KSVIEPNKVKSFHIVAHSLGCILALALAVKHPG-----SVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIA 315 (468)
Q Consensus 244 ---~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~-----~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (468)
..+.++++.++++++||||||.+++.++.++|+ +++++|+++++....... .....+... ..+.
T Consensus 82 ~~i~~l~~~~~~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~-----~~~~~~~~~-~~p~-- 153 (254)
T 3ds8_A 82 IAMEDLKSRYGFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPN-----DNGMDLSFK-KLPN-- 153 (254)
T ss_dssp HHHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCHH-----HHCSCTTCS-SCSS--
T ss_pred HHHHHHHHHhCCCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCccccc-----ccccccccc-cCCc--
Confidence 245567788999999999999999999999998 899999999876542110 000000000 0000
Q ss_pred hhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhcc
Q 012188 316 FGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNH 395 (468)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (468)
. ... +.... .. ...+..
T Consensus 154 -------------------------~--------------------------~~~---~~~~~--------~~-~~~~~~ 170 (254)
T 3ds8_A 154 -------------------------S--------------------------TPQ---MDYFI--------KN-QTEVSP 170 (254)
T ss_dssp -------------------------C--------------------------CHH---HHHHH--------HT-GGGSCT
T ss_pred -------------------------c--------------------------hHH---HHHHH--------HH-HhhCCC
Confidence 0 000 00000 00 000122
Q ss_pred CCCcEEEEeeC------CCCccChhhHHHHHHhCCC----CeEEEecC--CCccccccCcHHHHHHHHHHHHhhcCCC
Q 012188 396 VKCDVNVFHGE------DDELIPVECSYNVQRKIPR----ARVKVIEK--KDHITIVVGRQKTFARELEEIWRSSSGH 461 (468)
Q Consensus 396 i~~PvLii~G~------~D~~vp~~~~~~l~~~~p~----~~l~~i~~--~gH~~~~~e~p~~~~~~i~~fl~~~~~~ 461 (468)
++|++.|+|. .|.+||.+.++.+...+++ .+.+++.+ ++|..+. ++|+ +.+.+..||++....
T Consensus 171 -~~~vl~I~G~~~~~~~~Dg~Vp~~ss~~l~~~~~~~~~~~~~~~~~g~~a~Hs~l~-~~~~-v~~~i~~fL~~~~~~ 245 (254)
T 3ds8_A 171 -DLEVLAIAGELSEDNPTDGIVPTISSLATRLFMPGSAKAYIEDIQVGEDAVHQTLH-ETPK-SIEKTYWFLEKFKTD 245 (254)
T ss_dssp -TCEEEEEEEESBTTBCBCSSSBHHHHTGGGGTSBTTBSEEEEEEEESGGGCGGGGG-GSHH-HHHHHHHHHHTCCCS
T ss_pred -CcEEEEEEecCCCCCCCCcEeeHHHHHHHHHHhhccCcceEEEEEeCCCCchhccc-CCHH-HHHHHHHHHHHhcCC
Confidence 7899999999 9999999999999888775 23455655 7799987 7774 999999999886443
|
| >4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=99.77 E-value=3.6e-18 Score=153.96 Aligned_cols=176 Identities=10% Similarity=0.108 Sum_probs=120.0
Q ss_pred CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCC----CC-CCCCHHHHHHHHHHHHhc---ccC
Q 012188 180 SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKP----TD-SLYTVREHLDMIEKSVIE---PNK 251 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~----~~-~~~t~~~~~~di~~~l~~---~l~ 251 (468)
.+++|||+||+|++...+..+.+.|. ..++.|+++|.+|++.-+.. .. ....+++..+.+ ..+++ ..+
T Consensus 21 a~~~Vv~lHG~G~~~~~~~~l~~~l~---~~~~~v~~P~~~g~~w~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~ 96 (210)
T 4h0c_A 21 AKKAVVMLHGRGGTAADIISLQKVLK---LDEMAIYAPQATNNSWYPYSFMAPVQQNQPALDSALALV-GEVVAEIEAQG 96 (210)
T ss_dssp CSEEEEEECCTTCCHHHHHGGGGTSS---CTTEEEEEECCGGGCSSSSCTTSCGGGGTTHHHHHHHHH-HHHHHHHHHTT
T ss_pred CCcEEEEEeCCCCCHHHHHHHHHHhC---CCCeEEEeecCCCCCccccccCCCcccchHHHHHHHHHH-HHHHHHHHHhC
Confidence 35789999999887654444555554 58999999999987642211 11 122344444444 23332 233
Q ss_pred --CceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhh
Q 012188 252 --VKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISR 329 (468)
Q Consensus 252 --~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (468)
.++++++|+|+||.+++.++.++|++++++|.+++.........
T Consensus 97 i~~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~~~~~---------------------------------- 142 (210)
T 4h0c_A 97 IPAEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQELAI---------------------------------- 142 (210)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSSSCCG----------------------------------
T ss_pred CChhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCChhhhh----------------------------------
Confidence 46899999999999999999999999999999987543211000
Q ss_pred HHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCC
Q 012188 330 TICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDE 409 (468)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~ 409 (468)
.. .. ....++|++++||++|+
T Consensus 143 ------------------------------~~-----------------------~~------~~~~~~Pvl~~hG~~D~ 163 (210)
T 4h0c_A 143 ------------------------------GN-----------------------YK------GDFKQTPVFISTGNPDP 163 (210)
T ss_dssp ------------------------------GG-----------------------CC------BCCTTCEEEEEEEESCT
T ss_pred ------------------------------hh-----------------------hh------hhccCCceEEEecCCCC
Confidence 00 00 01226799999999999
Q ss_pred ccChhhHHHHHHhCC----CCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 410 LIPVECSYNVQRKIP----RARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 410 ~vp~~~~~~l~~~~p----~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
+||.+.++++.+.+. +++++++||.||.+. +++ .+.+.+||.+
T Consensus 164 ~vp~~~~~~~~~~L~~~g~~v~~~~ypg~gH~i~----~~e-l~~i~~wL~k 210 (210)
T 4h0c_A 164 HVPVSRVQESVTILEDMNAAVSQVVYPGRPHTIS----GDE-IQLVNNTILK 210 (210)
T ss_dssp TSCHHHHHHHHHHHHHTTCEEEEEEEETCCSSCC----HHH-HHHHHHTTTC
T ss_pred ccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCcC----HHH-HHHHHHHHcC
Confidence 999999888776553 468999999999754 334 4667788753
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A | Back alignment and structure |
|---|
Probab=99.77 E-value=3.1e-19 Score=170.48 Aligned_cols=202 Identities=14% Similarity=0.137 Sum_probs=128.8
Q ss_pred CCCeEEEEecCCC---CccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHh---cccCCc
Q 012188 180 SSRDTLFVKTQGP---SAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVI---EPNKVK 253 (468)
Q Consensus 180 ~~p~vl~lHG~g~---s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~---~~l~~~ 253 (468)
+.|+|||+||++. +...+..+...|. ++||.|+++|+||+|.+..+. ...+..+.+ ..+. +.++.+
T Consensus 81 ~~p~vv~~HGgg~~~~~~~~~~~~~~~l~---~~G~~v~~~d~r~~~~~~~~~----~~~d~~~~~-~~l~~~~~~~~~~ 152 (303)
T 4e15_A 81 QAPLFVFVHGGYWQEMDMSMSCSIVGPLV---RRGYRVAVMDYNLCPQVTLEQ----LMTQFTHFL-NWIFDYTEMTKVS 152 (303)
T ss_dssp TCCEEEEECCSTTTSCCGGGSCTTHHHHH---HTTCEEEEECCCCTTTSCHHH----HHHHHHHHH-HHHHHHHHHTTCS
T ss_pred CCCEEEEECCCcCcCCChhHHHHHHHHHH---hCCCEEEEecCCCCCCCChhH----HHHHHHHHH-HHHHHHhhhcCCC
Confidence 4689999999652 3333333555554 489999999999998763221 233333333 2333 467788
Q ss_pred eEEEEEEcccHHHHHHHHHhCCC-------ccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHH
Q 012188 254 SFHIVAHSLGCILALALAVKHPG-------SVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEH 326 (468)
Q Consensus 254 ~i~lvGhS~Gg~ial~~a~~~p~-------~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (468)
+++|+||||||.+++.++.+.+. +++++|+++|..... . ... .......
T Consensus 153 ~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~~-------~-~~~---~~~~~~~------------- 208 (303)
T 4e15_A 153 SLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDLR-------E-LSN---LESVNPK------------- 208 (303)
T ss_dssp CEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCCH-------H-HHT---CTTTSGG-------------
T ss_pred eEEEEeecHHHHHHHHHHhccccccCcccccccEEEEEeeeeccH-------h-hhc---ccccchh-------------
Confidence 99999999999999999987543 799999999876430 0 000 0000000
Q ss_pred HhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeC
Q 012188 327 ISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGE 406 (468)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~ 406 (468)
. ..... ...+... .............+++|+++++|+
T Consensus 209 --~--------------------------------~~~~~-~~~~~~~--------sp~~~~~~~~~~~~~~P~lii~G~ 245 (303)
T 4e15_A 209 --N--------------------------------ILGLN-ERNIESV--------SPMLWEYTDVTVWNSTKIYVVAAE 245 (303)
T ss_dssp --G--------------------------------TTCCC-TTTTTTT--------CGGGCCCCCGGGGTTSEEEEEEEE
T ss_pred --h--------------------------------hhcCC-HHHHHHc--------CchhhcccccccCCCCCEEEEEeC
Confidence 0 00000 0000000 000000000002348999999999
Q ss_pred CCCccChhhHHHHHHhCC----CCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 407 DDELIPVECSYNVQRKIP----RARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 407 ~D~~vp~~~~~~l~~~~p----~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
+|.++|.+.++.+.+.++ ++++++++++||+.++ +........+.+||.+
T Consensus 246 ~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~-~~~~~~~~~l~~~l~~ 299 (303)
T 4e15_A 246 HDSTTFIEQSRHYADVLRKKGYKASFTLFKGYDHFDII-EETAIDDSDVSRFLRN 299 (303)
T ss_dssp ESCHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETTHHH-HGGGSTTSHHHHHHHH
T ss_pred CCCCCchHHHHHHHHHHHHCCCceEEEEeCCCCchHHH-HHHhCCCcHHHHHHHH
Confidence 999999999999888775 5699999999999987 8888888888888755
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A | Back alignment and structure |
|---|
Probab=99.76 E-value=7.7e-18 Score=162.13 Aligned_cols=213 Identities=14% Similarity=0.098 Sum_probs=134.8
Q ss_pred eEEEEec--CCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCC--CCCCCCCHHHHHHHHHHHHhccc-CCceEEE
Q 012188 183 DTLFVKT--QGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPK--PTDSLYTVREHLDMIEKSVIEPN-KVKSFHI 257 (468)
Q Consensus 183 ~vl~lHG--~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~--~~~~~~t~~~~~~di~~~l~~~l-~~~~i~l 257 (468)
+++++|| ++++...+..+.+.|. .+|+|+++|+||+|.|.. .....++++++++++. ..++.. +.+++++
T Consensus 91 ~l~~~hg~g~~~~~~~~~~l~~~L~----~~~~v~~~d~~G~g~~~~~~~~~~~~~~~~~a~~~~-~~i~~~~~~~p~~l 165 (319)
T 2hfk_A 91 VLVGCTGTAANGGPHEFLRLSTSFQ----EERDFLAVPLPGYGTGTGTGTALLPADLDTALDAQA-RAILRAAGDAPVVL 165 (319)
T ss_dssp EEEEECCCCTTCSTTTTHHHHHTTT----TTCCEEEECCTTCCBC---CBCCEESSHHHHHHHHH-HHHHHHHTTSCEEE
T ss_pred cEEEeCCCCCCCcHHHHHHHHHhcC----CCCceEEecCCCCCCCcccccCCCCCCHHHHHHHHH-HHHHHhcCCCCEEE
Confidence 9999998 4555555556777776 899999999999999721 0112468999999984 555554 5678999
Q ss_pred EEEcccHHHHHHHHHhC----CCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHH
Q 012188 258 VAHSLGCILALALAVKH----PGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICL 333 (468)
Q Consensus 258 vGhS~Gg~ial~~a~~~----p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (468)
+||||||.+|+.+|.++ ++.|+++|++++...... .... .+...+...
T Consensus 166 ~G~S~GG~vA~~~A~~l~~~~g~~v~~lvl~d~~~~~~~------~~~~-------------------~~~~~l~~~--- 217 (319)
T 2hfk_A 166 LGHAGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQ------EPIE-------------------VWSRQLGEG--- 217 (319)
T ss_dssp EEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTSC------HHHH-------------------HTHHHHHHH---
T ss_pred EEECHHHHHHHHHHHHHHHhhCCCceEEEEeCCCCCCch------hHHH-------------------HHHHHhhHH---
Confidence 99999999999999987 467999999997642210 0000 000000000
Q ss_pred HhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccCh
Q 012188 334 LICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPV 413 (468)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~ 413 (468)
.+.. .+. .........+..+.... ..+ ....+++|+++++| +|..++.
T Consensus 218 --------------~~~~---------~~~-~~~~~~~~~~~~~~~~~----~~~---~~~~i~~Pvl~i~g-~D~~~~~ 265 (319)
T 2hfk_A 218 --------------LFAG---------ELE-PMSDARLLAMGRYARFL----AGP---RPGRSSAPVLLVRA-SEPLGDW 265 (319)
T ss_dssp --------------HHHT---------CSS-CCCHHHHHHHHHHHHHH----HSC---CCCCCCSCEEEEEE-SSCSSCC
T ss_pred --------------HHHh---------hcc-ccchHHHHHHHHHHHHH----HhC---CCCCcCCCEEEEEc-CCCCCCc
Confidence 0000 000 00000000000000000 000 12567999999999 9999887
Q ss_pred hh-HHHHHHhCC-CCeEEEecCCCccccccCcHHHHHHHHHHHHhhcCCC
Q 012188 414 EC-SYNVQRKIP-RARVKVIEKKDHITIVVGRQKTFARELEEIWRSSSGH 461 (468)
Q Consensus 414 ~~-~~~l~~~~p-~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~~~ 461 (468)
+. ...+.+.++ +.+++.++ +||+.++.++++++++.|.+||++....
T Consensus 266 ~~~~~~~~~~~~~~~~~~~v~-g~H~~~~~e~~~~~~~~i~~~L~~~~~~ 314 (319)
T 2hfk_A 266 QEERGDWRAHWDLPHTVADVP-GDHFTMMRDHAPAVAEAVLSWLDAIEGI 314 (319)
T ss_dssp CGGGCCCSCCCSSCSEEEEES-SCTTHHHHTCHHHHHHHHHHHHHHHHC-
T ss_pred cccccchhhcCCCCCEEEEeC-CCcHHHHHHhHHHHHHHHHHHHHhcCCC
Confidence 66 555555554 57999999 5999765479999999999999875443
|
| >2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=5e-18 Score=165.64 Aligned_cols=218 Identities=13% Similarity=0.061 Sum_probs=129.6
Q ss_pred CCCeEEEEecCCC---Cccc--hhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcc-----
Q 012188 180 SSRDTLFVKTQGP---SAFW--TETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEP----- 249 (468)
Q Consensus 180 ~~p~vl~lHG~g~---s~~~--~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~----- 249 (468)
+.|+||++||++. +... +..+...|+ .+.||.|+++|+||++.+..+ ..++|..+.+ ..+.+.
T Consensus 112 ~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la--~~~g~~vv~~d~rg~~~~~~~----~~~~D~~~~~-~~l~~~~~~~~ 184 (351)
T 2zsh_A 112 IVPVILFFHGGSFAHSSANSAIYDTLCRRLV--GLCKCVVVSVNYRRAPENPYP----CAYDDGWIAL-NWVNSRSWLKS 184 (351)
T ss_dssp SCEEEEEECCSTTTSCCTTBHHHHHHHHHHH--HHHTSEEEEECCCCTTTSCTT----HHHHHHHHHH-HHHHTCGGGCC
T ss_pred CceEEEEECCCcCcCCCCcchhHHHHHHHHH--HHcCCEEEEecCCCCCCCCCc----hhHHHHHHHH-HHHHhCchhhc
Confidence 3578999999664 2222 344555554 026999999999998876433 2456666666 455553
Q ss_pred -cCCc-eEEEEEEcccHHHHHHHHHhCCC---ccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHH
Q 012188 250 -NKVK-SFHIVAHSLGCILALALAVKHPG---SVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWY 324 (468)
Q Consensus 250 -l~~~-~i~lvGhS~Gg~ial~~a~~~p~---~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (468)
++.+ +++|+||||||.+|+.+|.++|+ +++++|+++|........ . ..... ........ .
T Consensus 185 ~~d~~~~i~l~G~S~GG~la~~~a~~~~~~~~~v~~~vl~~p~~~~~~~~---~-~~~~~-~~~~~~~~----~------ 249 (351)
T 2zsh_A 185 KKDSKVHIFLAGDSSGGNIAHNVALRAGESGIDVLGNILLNPMFGGNERT---E-SEKSL-DGKYFVTV----R------ 249 (351)
T ss_dssp TTTSSCEEEEEEETHHHHHHHHHHHHHHTTTCCCCEEEEESCCCCCSSCC---H-HHHHH-TTTSSCCH----H------
T ss_pred CCCCCCcEEEEEeCcCHHHHHHHHHHhhccCCCeeEEEEECCccCCCcCC---h-hhhhc-CCCcccCH----H------
Confidence 4557 99999999999999999999998 899999999876432211 0 00000 00000000 0
Q ss_pred HHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCC-cEEEE
Q 012188 325 EHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKC-DVNVF 403 (468)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-PvLii 403 (468)
...... ..+....... . .... . ... .....+.++++ |+|++
T Consensus 250 ----------------~~~~~~--------~~~~~~~~~~-~-----~~~~----~---~~~-~~~~~l~~i~~pP~Lii 291 (351)
T 2zsh_A 250 ----------------DRDWYW--------KAFLPEGEDR-E-----HPAC----N---PFS-PRGKSLEGVSFPKSLVV 291 (351)
T ss_dssp ----------------HHHHHH--------HHHSCTTCCT-T-----STTT----C---TTS-TTSCCCTTCCCCEEEEE
T ss_pred ----------------HHHHHH--------HHhCCCCCCC-C-----Cccc----C---CCC-CCccchhhCCCCCEEEE
Confidence 000000 0000000000 0 0000 0 000 00111244566 99999
Q ss_pred eeCCCCccChh--hHHHHHHhCCCCeEEEecCCCccccc---cCcHHHHHHHHHHHHhh
Q 012188 404 HGEDDELIPVE--CSYNVQRKIPRARVKVIEKKDHITIV---VGRQKTFARELEEIWRS 457 (468)
Q Consensus 404 ~G~~D~~vp~~--~~~~l~~~~p~~~l~~i~~~gH~~~~---~e~p~~~~~~i~~fl~~ 457 (468)
+|++|.+++.. ..+.+.+..+++++++++++||..+. .++++++.+.|.+||++
T Consensus 292 ~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~g~gH~~~~~~~~~~~~~~~~~i~~Fl~~ 350 (351)
T 2zsh_A 292 VAGLDLIRDWQLAYAEGLKKAGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAFVNA 350 (351)
T ss_dssp EETTSTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTTTSSSCSHHHHHHHHHHHHHHHC
T ss_pred EcCCCcchHHHHHHHHHHHHcCCCEEEEEECCCcEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 99999998632 23333333347899999999998774 26789999999999975
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=3.5e-18 Score=163.82 Aligned_cols=102 Identities=18% Similarity=0.175 Sum_probs=81.7
Q ss_pred CCCeEEEEecCCCCccc-hh-hhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceEEE
Q 012188 180 SSRDTLFVKTQGPSAFW-TE-TLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHI 257 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~-~~-~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i~l 257 (468)
.+++|||+||++++... |. .+.+.|. ++||+|+++|+||||.++.. .+.+++.+.+ ..+++..+.+++++
T Consensus 30 ~~~~VvllHG~~~~~~~~~~~~l~~~L~---~~G~~v~~~d~~g~g~~~~~----~~~~~l~~~i-~~~~~~~g~~~v~l 101 (317)
T 1tca_A 30 VSKPILLVPGTGTTGPQSFDSNWIPLST---QLGYTPCWISPPPFMLNDTQ----VNTEYMVNAI-TALYAGSGNNKLPV 101 (317)
T ss_dssp CSSEEEEECCTTCCHHHHHTTTHHHHHH---TTTCEEEEECCTTTTCSCHH----HHHHHHHHHH-HHHHHHTTSCCEEE
T ss_pred CCCeEEEECCCCCCcchhhHHHHHHHHH---hCCCEEEEECCCCCCCCcHH----HHHHHHHHHH-HHHHHHhCCCCEEE
Confidence 45789999999887653 33 5777776 46999999999999976421 2345566666 57777888899999
Q ss_pred EEEcccHHHHHHHHHhCC---CccceEEEecCCCC
Q 012188 258 VAHSLGCILALALAVKHP---GSVKSLTLLAPPYY 289 (468)
Q Consensus 258 vGhS~Gg~ial~~a~~~p---~~v~~lVl~~p~~~ 289 (468)
|||||||.+++.++.++| ++|+++|+++++..
T Consensus 102 VGhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~~~ 136 (317)
T 1tca_A 102 LTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK 136 (317)
T ss_dssp EEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred EEEChhhHHHHHHHHHcCccchhhhEEEEECCCCC
Confidence 999999999999998886 78999999998754
|
| >2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.76 E-value=3.3e-17 Score=154.12 Aligned_cols=231 Identities=15% Similarity=0.098 Sum_probs=128.5
Q ss_pred CCCCeEEEEecCC---CCc-cchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHH---HHHhcccC
Q 012188 179 SSSRDTLFVKTQG---PSA-FWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIE---KSVIEPNK 251 (468)
Q Consensus 179 ~~~p~vl~lHG~g---~s~-~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~---~~l~~~l~ 251 (468)
+++|+|||+||+| ++. .|+..+.+.+. +.||+|+++|+|+.+.. .+...++|+. +.+.++..
T Consensus 25 ~~~p~iv~~HGGg~~~g~~~~~~~~~~~~l~---~~g~~Vi~vdYrlaPe~--------~~p~~~~D~~~al~~l~~~~~ 93 (274)
T 2qru_A 25 EPTNYVVYLHGGGMIYGTKSDLPEELKELFT---SNGYTVLALDYLLAPNT--------KIDHILRTLTETFQLLNEEII 93 (274)
T ss_dssp SSCEEEEEECCSTTTSCCGGGCCHHHHHHHH---TTTEEEEEECCCCTTTS--------CHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCcEEEEEeCccccCCChhhchHHHHHHHH---HCCCEEEEeCCCCCCCC--------CCcHHHHHHHHHHHHHHhccc
Confidence 3467899999987 333 24344556555 47999999999986532 3444444442 34454444
Q ss_pred -CceEEEEEEcccHHHHHHHHH---hCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHH
Q 012188 252 -VKSFHIVAHSLGCILALALAV---KHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHI 327 (468)
Q Consensus 252 -~~~i~lvGhS~Gg~ial~~a~---~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (468)
.++++|+|+|+||.+|+.++. .+|.++++++++.|......... ......+.... .......
T Consensus 94 ~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~~~~~~~----------~~~~~~~~~~~-~~~~~~~--- 159 (274)
T 2qru_A 94 QNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTDLEFIKE----------PRKLLKQAISA-KEIAAID--- 159 (274)
T ss_dssp TTCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSCSGGGGS----------CCCSCSSCCCS-GGGTTSC---
T ss_pred cCCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEEEEcccccccccCC----------chhhccccccH-HHHhhhc---
Confidence 689999999999999999997 46788999999877543100000 00000000000 0000000
Q ss_pred hhHHHHHhhccchhHHHHHH-HHhhh--HHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEe
Q 012188 328 SRTICLLICKNHRVWEFLAK-LVTRN--RIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFH 404 (468)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~ 404 (468)
.. .... .......... ..... ....+. .. .... . ..........+..+ .|++|++
T Consensus 160 ~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~-----------~-~~~~~~~~~~l~~l-pP~li~~ 217 (274)
T 2qru_A 160 QT---KPVW-DDPFLSRYLLYHYSIQQALLPHFY-GL----PENG-----------D-WSAYALSDETLKTF-PPCFSTA 217 (274)
T ss_dssp CS---SCCS-CCTTCTTHHHHHHHHHTTCHHHHH-TC----CTTS-----------C-CGGGCCCHHHHHTS-CCEEEEE
T ss_pred cc---CCCC-CCccccchhhhhhhhhhcchhhcc-Cc----cccc-----------c-cccCCCChhhhcCC-CCEEEEE
Confidence 00 0000 0000000000 00000 000000 00 0000 0 00000001123555 7999999
Q ss_pred eCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcH----HHHHHHHHHHHhh
Q 012188 405 GEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQ----KTFARELEEIWRS 457 (468)
Q Consensus 405 G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p----~~~~~~i~~fl~~ 457 (468)
|+.|..++...++.+.+.++++++++++|++|..+. +.+ +++.+.+.+||++
T Consensus 218 G~~D~~~~~~~~~~l~~~~~~~~l~~~~g~~H~~~~-~~~~~~~~~~~~~~~~fl~~ 273 (274)
T 2qru_A 218 SSSDEEVPFRYSKKIGRTIPESTFKAVYYLEHDFLK-QTKDPSVITLFEQLDSWLKE 273 (274)
T ss_dssp ETTCSSSCTHHHHHHHHHSTTCEEEEECSCCSCGGG-GTTSHHHHHHHHHHHHHHHT
T ss_pred ecCCCCcCHHHHHHHHHhCCCcEEEEcCCCCcCCcc-CcCCHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999875 433 3568888899865
|
| >3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.76 E-value=2e-17 Score=155.38 Aligned_cols=107 Identities=16% Similarity=0.084 Sum_probs=76.4
Q ss_pred CCeEEEEecCCCCccchhh---hhhhccccCCCcceEEEECCCCCCCCCCCCC---------------------CCCCHH
Q 012188 181 SRDTLFVKTQGPSAFWTET---LFPNFSSASKSTYRLFAIDLLGFGRSPKPTD---------------------SLYTVR 236 (468)
Q Consensus 181 ~p~vl~lHG~g~s~~~~~~---~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~---------------------~~~t~~ 236 (468)
.|+||++||++++...+.. +...+. +.||.|+++|+||+|.|..... ..+...
T Consensus 44 ~p~vv~lHG~~~~~~~~~~~~~~~~~~~---~~g~~vv~~d~~g~G~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 120 (278)
T 3e4d_A 44 CPVVWYLSGLTCTHANVMEKGEYRRMAS---ELGLVVVCPDTSPRGNDVPDELTNWQMGKGAGFYLDATEEPWSEHYQMY 120 (278)
T ss_dssp EEEEEEECCTTCCSHHHHHHSCCHHHHH---HHTCEEEECCSSCCSTTSCCCTTCTTSBTTBCTTSBCCSTTTTTTCBHH
T ss_pred CCEEEEEcCCCCCccchhhcccHHHHHh---hCCeEEEecCCcccCcccccccccccccCCccccccCCcCcccchhhHH
Confidence 4789999998876653332 222232 2489999999999999854331 011223
Q ss_pred -HHHHHHHHHHhcccCC--ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCC
Q 012188 237 -EHLDMIEKSVIEPNKV--KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 237 -~~~~di~~~l~~~l~~--~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~ 290 (468)
..++++...+.+.+++ ++++|+||||||.+|+.+|.++|+.++++++++|...+
T Consensus 121 ~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~ 177 (278)
T 3e4d_A 121 SYVTEELPALIGQHFRADMSRQSIFGHSMGGHGAMTIALKNPERFKSCSAFAPIVAP 177 (278)
T ss_dssp HHHHTHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCSCG
T ss_pred HHHHHHHHHHHHhhcCCCcCCeEEEEEChHHHHHHHHHHhCCcccceEEEeCCcccc
Confidence 3344553334444566 79999999999999999999999999999999987643
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.75 E-value=7.1e-18 Score=181.01 Aligned_cols=221 Identities=11% Similarity=0.055 Sum_probs=142.5
Q ss_pred CCCCceeEEEecCC-------CCeEEEEecCCCCc----cchhhhhhhccccCCCcceEEEECCCCCCCCCCCC------
Q 012188 167 SDCDCKFCTCWSSS-------SRDTLFVKTQGPSA----FWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPT------ 229 (468)
Q Consensus 167 ~d~~~~~~~~~~~~-------~p~vl~lHG~g~s~----~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~------ 229 (468)
.||..+.+..+.+. .|+||++||++++. .|...+...+. .++||.|+++|+||+|.+....
T Consensus 481 ~dg~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~l~--~~~G~~Vv~~D~rG~g~~g~~~~~~~~~ 558 (740)
T 4a5s_A 481 LNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLA--STENIIVASFDGRGSGYQGDKIMHAINR 558 (740)
T ss_dssp ETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHH--HTTCCEEEEECCTTCSSSCHHHHGGGTT
T ss_pred cCCeEEEEEEEeCCCCCCCCCccEEEEECCCCcccccccccCcCHHHHHH--hcCCeEEEEEcCCCCCcCChhHHHHHHh
Confidence 36666666666332 37899999988752 22212223332 1379999999999999764211
Q ss_pred -CCCCCHHHHHHHHHHHHhccc--CCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhc
Q 012188 230 -DSLYTVREHLDMIEKSVIEPN--KVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVA 306 (468)
Q Consensus 230 -~~~~t~~~~~~di~~~l~~~l--~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~ 306 (468)
.....++|+.+.+ +.+.+.- +.++++|+||||||++++.++.++|++++++|+++|........
T Consensus 559 ~~~~~~~~D~~~~i-~~l~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~------------ 625 (740)
T 4a5s_A 559 RLGTFEVEDQIEAA-RQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYD------------ 625 (740)
T ss_dssp CTTSHHHHHHHHHH-HHHHTSTTEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGGSB------------
T ss_pred hhCcccHHHHHHHH-HHHHhcCCcCCccEEEEEECHHHHHHHHHHHhCCCceeEEEEcCCccchHHhh------------
Confidence 1223466777666 4665432 23789999999999999999999999999999999875421000
Q ss_pred CCCCCchhhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhccccccc
Q 012188 307 PRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLD 386 (468)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (468)
..+.+.. +.. +.. ... ...+. .
T Consensus 626 --------------~~~~~~~-------~~~-p~~---------~~~--------------~~~~~-------------~ 647 (740)
T 4a5s_A 626 --------------SVYTERY-------MGL-PTP---------EDN--------------LDHYR-------------N 647 (740)
T ss_dssp --------------HHHHHHH-------HCC-SST---------TTT--------------HHHHH-------------H
T ss_pred --------------hHHHHHH-------cCC-CCc---------ccc--------------HHHHH-------------h
Confidence 0000000 000 000 000 00000 0
Q ss_pred chHHHhhccCCC-cEEEEeeCCCCccChhhHHHHHHhCC----CCeEEEecCCCccccccCcHHHHHHHHHHHHhhcCC
Q 012188 387 GYLDAVRNHVKC-DVNVFHGEDDELIPVECSYNVQRKIP----RARVKVIEKKDHITIVVGRQKTFARELEEIWRSSSG 460 (468)
Q Consensus 387 ~~~~~~~~~i~~-PvLii~G~~D~~vp~~~~~~l~~~~p----~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~~ 460 (468)
......+.++++ |+|++||++|..+|++.+.++.+.++ +.++++++++||.....+.++.+.+.+.+||++.-.
T Consensus 648 ~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 726 (740)
T 4a5s_A 648 STVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFS 726 (740)
T ss_dssp SCSGGGGGGGGGSEEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTCCSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHhcCCCCcEEEEEcCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCcCCCCccHHHHHHHHHHHHHHHcC
Confidence 000111245565 99999999999999999888877663 469999999999984447889999999999987543
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.75 E-value=4.2e-18 Score=157.01 Aligned_cols=191 Identities=17% Similarity=0.115 Sum_probs=123.6
Q ss_pred CCCeEEEEecCCCCccchhh----hhhhccccCCCcceEEEECCC---------------------CCCCCCCCC-----
Q 012188 180 SSRDTLFVKTQGPSAFWTET----LFPNFSSASKSTYRLFAIDLL---------------------GFGRSPKPT----- 229 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~~~----~~~~L~~~~~~gy~Via~D~~---------------------G~G~S~~~~----- 229 (468)
.+|+||++||++++...+.. +.+.|. +.||+|+++|+| |+|.+..-.
T Consensus 4 ~~~~vl~lHG~g~~~~~~~~~~~~l~~~l~---~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~w~~~~~~ 80 (243)
T 1ycd_A 4 QIPKLLFLHGFLQNGKVFSEKSSGIRKLLK---KANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRAWFYHSEI 80 (243)
T ss_dssp CCCEEEEECCTTCCHHHHHHHTHHHHHHHH---HTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEESSCCCSS
T ss_pred cCceEEEeCCCCccHHHHHHHHHHHHHHHh---hcceEEEEcCCCeeCCCcCcccccccccccccCCCCCCcccccCCCC
Confidence 46889999999988764432 333343 249999999999 455542110
Q ss_pred CCCCCHHHHHHHHHHHHhcccCCceEEEEEEcccHHHHHHHHHhCC------CccceEEEecCCCCCCCCCchhhHHHHH
Q 012188 230 DSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHP------GSVKSLTLLAPPYYPVPKGAQASQYVMR 303 (468)
Q Consensus 230 ~~~~t~~~~~~di~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p------~~v~~lVl~~p~~~~~~~~~~~~~~~~~ 303 (468)
....++.+.++.+ ...++..+ ++++|+||||||.+|+.+|.+++ ..++.++++++.....+..
T Consensus 81 ~~~~d~~~~~~~l-~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~~--------- 149 (243)
T 1ycd_A 81 SHELDISEGLKSV-VDHIKANG-PYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPDP--------- 149 (243)
T ss_dssp GGGCCCHHHHHHH-HHHHHHHC-CCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEECT---------
T ss_pred cchhhHHHHHHHH-HHHHHhcC-CeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCCCccc---------
Confidence 0124667777776 45554444 57899999999999999998763 2466777776543210000
Q ss_pred hhcCCCCCchhhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccc
Q 012188 304 KVAPRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTAN 383 (468)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (468)
.... . . .+...+ . .
T Consensus 150 ------~~~~----~-----------------------------------~--~~~~~~---------~----------~ 163 (243)
T 1ycd_A 150 ------EHPG----E-----------------------------------L--RITEKF---------R----------D 163 (243)
T ss_dssp ------TSTT----C-----------------------------------E--EECGGG---------T----------T
T ss_pred ------cccc----c-----------------------------------c--ccchhH---------H----------H
Confidence 0000 0 0 000000 0 0
Q ss_pred cccchHHHhhccCCCcEEEEeeCCCCccChhhHHHHHHhCCCC-------eEEEecCCCccccccCcHHHHHHHHHHHHh
Q 012188 384 KLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRA-------RVKVIEKKDHITIVVGRQKTFARELEEIWR 456 (468)
Q Consensus 384 ~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~~-------~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~ 456 (468)
... ...++++|+++++|++|.++|++.++.+.+.+++. ..++++++||+... + +.+.+.+.+||+
T Consensus 164 ~~~-----~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~g~~~~~~~~~~~~~gH~~~~-~--~~~~~~i~~fl~ 235 (243)
T 1ycd_A 164 SFA-----VKPDMKTKMIFIYGASDQAVPSVRSKYLYDIYLKAQNGNKEKVLAYEHPGGHMVPN-K--KDIIRPIVEQIT 235 (243)
T ss_dssp TTC-----CCTTCCCEEEEEEETTCSSSCHHHHHHHHHHHHHHTTTCTTTEEEEEESSSSSCCC-C--HHHHHHHHHHHH
T ss_pred hcc-----CcccCCCCEEEEEeCCCCccCHHHHHHHHHHhhhhccccccccEEEecCCCCcCCc-h--HHHHHHHHHHHH
Confidence 000 12457899999999999999999999998877653 66778888998764 3 359999999998
Q ss_pred hc
Q 012188 457 SS 458 (468)
Q Consensus 457 ~~ 458 (468)
+.
T Consensus 236 ~~ 237 (243)
T 1ycd_A 236 SS 237 (243)
T ss_dssp HH
T ss_pred Hh
Confidence 64
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.74 E-value=8.8e-18 Score=179.51 Aligned_cols=214 Identities=13% Similarity=0.066 Sum_probs=138.6
Q ss_pred CceeEEEecC-------CCCeEEEEecCCCCcc----chhhhhhhccccCCCcceEEEECCCCCCCCCCCCC-------C
Q 012188 170 DCKFCTCWSS-------SSRDTLFVKTQGPSAF----WTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD-------S 231 (468)
Q Consensus 170 ~~~~~~~~~~-------~~p~vl~lHG~g~s~~----~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~-------~ 231 (468)
..+.+..+.+ +.|+||++||++++.. |...+...+. .++||.|+++|+||+|.+..... .
T Consensus 478 ~~l~~~~~~P~~~~~~~~~p~vl~~hG~~~~~~~~~~~~~~~~~~l~--~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~ 555 (719)
T 1z68_A 478 ITLWYKMILPPQFDRSKKYPLLIQVYGGPCSQSVRSVFAVNWISYLA--SKEGMVIALVDGRGTAFQGDKLLYAVYRKLG 555 (719)
T ss_dssp EEEEEEEEECTTCCSSSCEEEEEEECCCTTBCCCCCCCCCCHHHHHH--HTTCCEEEEEECTTBSSSCHHHHGGGTTCTT
T ss_pred eEEEEEEEeCCCCCCCCCccEEEEECCCCCcCcccccchhhHHHHHH--hcCCeEEEEEcCCCCCCCchhhHHHHhhccC
Confidence 4555555532 2367999999987542 3212333331 14799999999999999853210 1
Q ss_pred CCCHHHHHHHHHHHHhccc--CCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCC
Q 012188 232 LYTVREHLDMIEKSVIEPN--KVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRR 309 (468)
Q Consensus 232 ~~t~~~~~~di~~~l~~~l--~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~ 309 (468)
....+++.+.+ ..+.+.. +.++++++||||||++++.++.++|++++++|+++|........ ..
T Consensus 556 ~~~~~d~~~~~-~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~---~~---------- 621 (719)
T 1z68_A 556 VYEVEDQITAV-RKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSSWEYYA---SV---------- 621 (719)
T ss_dssp HHHHHHHHHHH-HHHHTTSCEEEEEEEEEEETHHHHHHHHHHTTSSSCCSEEEEESCCCCTTTSB---HH----------
T ss_pred cccHHHHHHHH-HHHHhcCCCCCceEEEEEECHHHHHHHHHHHhCCCceEEEEEcCCccChHHhc---cc----------
Confidence 12455555566 4666542 24689999999999999999999999999999999876431110 00
Q ss_pred CCchhhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchH
Q 012188 310 VWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYL 389 (468)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (468)
+.+.. +. .+...+ .. ..+. . ...
T Consensus 622 -------------~~~~~-------~g-~~~~~~---------~~--------------~~~~------~-------~~~ 644 (719)
T 1z68_A 622 -------------YTERF-------MG-LPTKDD---------NL--------------EHYK------N-------STV 644 (719)
T ss_dssp -------------HHHHH-------HC-CSSTTT---------TH--------------HHHH------H-------TCS
T ss_pred -------------cchhh-------cC-Cccccc---------ch--------------hhhh------h-------CCH
Confidence 00000 00 000000 00 0000 0 000
Q ss_pred HHhhccCCC-cEEEEeeCCCCccChhhHHHHHHhCC----CCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 390 DAVRNHVKC-DVNVFHGEDDELIPVECSYNVQRKIP----RARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 390 ~~~~~~i~~-PvLii~G~~D~~vp~~~~~~l~~~~p----~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
...+.++++ |+|+++|++|..+|++.++++.+.++ +.++++++++||.... ++++.+.+.+.+||++
T Consensus 645 ~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~ 716 (719)
T 1z68_A 645 MARAEYFRNVDYLLIHGTADDNVHFQNSAQIAKALVNAQVDFQAMWYSDQNHGLSG-LSTNHLYTHMTHFLKQ 716 (719)
T ss_dssp GGGGGGGTTSEEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTCCT-HHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCCcEEEEEeCCCCCcCHHHHHHHHHHHHHCCCceEEEEECcCCCCCCc-ccHHHHHHHHHHHHHH
Confidence 111345677 89999999999999999988888664 4579999999999853 7799999999999976
|
| >2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A | Back alignment and structure |
|---|
Probab=99.73 E-value=1.4e-17 Score=159.47 Aligned_cols=102 Identities=13% Similarity=0.069 Sum_probs=73.8
Q ss_pred CCeEEEEec---CCCCccchhhhhhhccccCCC-cceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhc---ccC--
Q 012188 181 SRDTLFVKT---QGPSAFWTETLFPNFSSASKS-TYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIE---PNK-- 251 (468)
Q Consensus 181 ~p~vl~lHG---~g~s~~~~~~~~~~L~~~~~~-gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~---~l~-- 251 (468)
.|+||++|| .+++...+..+...|+ ++ ||.|+++|+||+|.+..+. ..++..+.+ ..+.+ .++
T Consensus 74 ~p~vv~~HGGg~~~g~~~~~~~~~~~la---~~~g~~v~~~d~rg~~~~~~~~----~~~d~~~~~-~~l~~~~~~~~~~ 145 (310)
T 2hm7_A 74 YPALVYYHGGSWVVGDLETHDPVCRVLA---KDGRAVVFSVDYRLAPEHKFPA----AVEDAYDAL-QWIAERAADFHLD 145 (310)
T ss_dssp EEEEEEECCSTTTSCCTTTTHHHHHHHH---HHHTSEEEEECCCCTTTSCTTH----HHHHHHHHH-HHHHHTTGGGTEE
T ss_pred CCEEEEECCCccccCChhHhHHHHHHHH---HhcCCEEEEeCCCCCCCCCCCc----cHHHHHHHH-HHHHhhHHHhCCC
Confidence 478999999 4445444445667765 33 8999999999999875432 233333333 33333 333
Q ss_pred CceEEEEEEcccHHHHHHHHHhCCC----ccceEEEecCCCCC
Q 012188 252 VKSFHIVAHSLGCILALALAVKHPG----SVKSLTLLAPPYYP 290 (468)
Q Consensus 252 ~~~i~lvGhS~Gg~ial~~a~~~p~----~v~~lVl~~p~~~~ 290 (468)
.++++|+||||||.+|+.++.++|+ .++++|+++|....
T Consensus 146 ~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~~~vl~~p~~~~ 188 (310)
T 2hm7_A 146 PARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGY 188 (310)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHHHHTTCCCCCCEEEESCCCCC
T ss_pred cceEEEEEECHHHHHHHHHHHHHHhcCCCCceEEEEEcCCcCC
Confidence 3689999999999999999998886 69999999987654
|
| >3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.73 E-value=5e-17 Score=156.81 Aligned_cols=222 Identities=12% Similarity=0.089 Sum_probs=131.1
Q ss_pred ceeEEEe---cCCCCeEEEEecCC---CCccchhhhhhhccccCC-CcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHH
Q 012188 171 CKFCTCW---SSSSRDTLFVKTQG---PSAFWTETLFPNFSSASK-STYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIE 243 (468)
Q Consensus 171 ~~~~~~~---~~~~p~vl~lHG~g---~s~~~~~~~~~~L~~~~~-~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~ 243 (468)
.+.++.+ +.++|+||++||+| ++...+..+...|+ + .||.|+++|+|+.+....+. .++|..+.+
T Consensus 74 ~i~~~~~~p~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la---~~~g~~V~~~dyr~~p~~~~~~----~~~D~~~a~- 145 (326)
T 3ga7_A 74 DVTTRLYSPQPTSQATLYYLHGGGFILGNLDTHDRIMRLLA---RYTGCTVIGIDYSLSPQARYPQ----AIEETVAVC- 145 (326)
T ss_dssp CEEEEEEESSSSCSCEEEEECCSTTTSCCTTTTHHHHHHHH---HHHCSEEEEECCCCTTTSCTTH----HHHHHHHHH-
T ss_pred CeEEEEEeCCCCCCcEEEEECCCCcccCChhhhHHHHHHHH---HHcCCEEEEeeCCCCCCCCCCc----HHHHHHHHH-
Confidence 4555555 33458999999988 55555555777776 2 49999999999876654332 344444444
Q ss_pred HHHhcc---cCC--ceEEEEEEcccHHHHHHHHHhCCCc------cceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCc
Q 012188 244 KSVIEP---NKV--KSFHIVAHSLGCILALALAVKHPGS------VKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWP 312 (468)
Q Consensus 244 ~~l~~~---l~~--~~i~lvGhS~Gg~ial~~a~~~p~~------v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (468)
+.+.+. +++ ++++|+|||+||.+|+.++.++|+. +++++++.|........ .. .... ..+.
T Consensus 146 ~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~~~~~~~~~~---~~---~~~~--~~~~ 217 (326)
T 3ga7_A 146 SYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGLYGLQDSV---SR---RLFG--GAWD 217 (326)
T ss_dssp HHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEEEEEESCCCSCSCCH---HH---HHCC--CTTT
T ss_pred HHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceEEEEeccccccCCCh---hH---hhhc--CCCC
Confidence 344443 343 6999999999999999999988764 89999998765432110 00 0000 0000
Q ss_pred hhhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHh
Q 012188 313 LIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAV 392 (468)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (468)
.+.. .....+. ..+..... .... .........
T Consensus 218 ~l~~-----------------------------------~~~~~~~-~~~~~~~~-~~~~-----------~~~~~~~~~ 249 (326)
T 3ga7_A 218 GLTR-----------------------------------EDLDMYE-KAYLRNDE-DRES-----------PWYCLFNND 249 (326)
T ss_dssp TCCH-----------------------------------HHHHHHH-HHHCSSGG-GGGC-----------TTTSGGGSC
T ss_pred CCCH-----------------------------------HHHHHHH-HHhCCCCC-ccCC-----------cccCCCcch
Confidence 0000 0000000 00000000 0000 000000111
Q ss_pred hccCCCcEEEEeeCCCCccChhhHHHHHHhC----CCCeEEEecCCCcccccc----CcHHHHHHHHHHHHhhc
Q 012188 393 RNHVKCDVNVFHGEDDELIPVECSYNVQRKI----PRARVKVIEKKDHITIVV----GRQKTFARELEEIWRSS 458 (468)
Q Consensus 393 ~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~----p~~~l~~i~~~gH~~~~~----e~p~~~~~~i~~fl~~~ 458 (468)
+.+...|+++++|+.|.+++ .+..+++.+ ..+++++++|++|..... +..+++.+.+.+||++.
T Consensus 250 ~~~~~~P~li~~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~ 321 (326)
T 3ga7_A 250 LTRDVPPCFIASAEFDPLID--DSRLLHQTLQAHQQPCEYKMYPGTLHAFLHYSRMMTIADDALQDGARFFMAR 321 (326)
T ss_dssp CSSCCCCEEEEEETTCTTHH--HHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHH
T ss_pred hhcCCCCEEEEecCcCcCHH--HHHHHHHHHHHCCCcEEEEEeCCCccchhhhcCccHHHHHHHHHHHHHHHHH
Confidence 12345699999999999984 445554444 356999999999987531 34688999999999764
|
| >3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A | Back alignment and structure |
|---|
Probab=99.73 E-value=7.4e-17 Score=151.78 Aligned_cols=106 Identities=15% Similarity=0.073 Sum_probs=74.4
Q ss_pred CCeEEEEecCCCCccchhh---hhhhccccCCCcceEEEECCCCCCCCCCCCC--------------------CCCC-HH
Q 012188 181 SRDTLFVKTQGPSAFWTET---LFPNFSSASKSTYRLFAIDLLGFGRSPKPTD--------------------SLYT-VR 236 (468)
Q Consensus 181 ~p~vl~lHG~g~s~~~~~~---~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~--------------------~~~t-~~ 236 (468)
.|+||++||++++...+.. +...+. +.||.|+++|.+++|.+..... ..+. ..
T Consensus 47 ~p~vv~lHG~~~~~~~~~~~~~~~~~~~---~~g~~vv~pd~~~~g~~~~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~ 123 (280)
T 3i6y_A 47 VPVLYWLSGLTCSDENFMQKAGAQRLAA---ELGIAIVAPDTSPRGEGVADDEGYDLGQGAGFYVNATQAPWNRHYQMYD 123 (280)
T ss_dssp EEEEEEECCTTCCSSHHHHHSCCHHHHH---HHTCEEEEECSSCCSTTCCCCSSTTSSTTCCTTCBCCSTTGGGTCBHHH
T ss_pred ccEEEEecCCCCChhHHhhcccHHHHHh---hCCeEEEEeCCcccccccCcccccccccCccccccccCCCccchhhHHH
Confidence 4789999998876543322 222232 3689999999998877532211 0012 23
Q ss_pred HHHHHHHHHHhcccCC-ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCC
Q 012188 237 EHLDMIEKSVIEPNKV-KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYY 289 (468)
Q Consensus 237 ~~~~di~~~l~~~l~~-~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~ 289 (468)
..++++...+.+.++. ++++|+||||||.+|+.++.++|++++++++++|...
T Consensus 124 ~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~ 177 (280)
T 3i6y_A 124 YVVNELPELIESMFPVSDKRAIAGHSMGGHGALTIALRNPERYQSVSAFSPINN 177 (280)
T ss_dssp HHHTHHHHHHHHHSSEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCCC
T ss_pred HHHHHHHHHHHHhCCCCCCeEEEEECHHHHHHHHHHHhCCccccEEEEeCCccc
Confidence 3445663333355565 7999999999999999999999999999999998764
|
| >3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A | Back alignment and structure |
|---|
Probab=99.73 E-value=6.6e-17 Score=155.77 Aligned_cols=104 Identities=18% Similarity=0.163 Sum_probs=77.3
Q ss_pred CCCeEEEEecCCC---CccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcc-cCCceE
Q 012188 180 SSRDTLFVKTQGP---SAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEP-NKVKSF 255 (468)
Q Consensus 180 ~~p~vl~lHG~g~---s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~-l~~~~i 255 (468)
+.|+||++||+|. +...+..+...+.. +.||.|+++|+|+.+....+ ..++|..+.+ ..+.++ ++.+++
T Consensus 79 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~--~~g~~vv~~dyr~~p~~~~~----~~~~D~~~a~-~~l~~~~~d~~ri 151 (322)
T 3fak_A 79 AGKAILYLHGGGYVMGSINTHRSMVGEISR--ASQAAALLLDYRLAPEHPFP----AAVEDGVAAY-RWLLDQGFKPQHL 151 (322)
T ss_dssp TTCEEEEECCSTTTSCCHHHHHHHHHHHHH--HHTSEEEEECCCCTTTSCTT----HHHHHHHHHH-HHHHHHTCCGGGE
T ss_pred CccEEEEEcCCccccCChHHHHHHHHHHHH--hcCCEEEEEeCCCCCCCCCC----cHHHHHHHHH-HHHHHcCCCCceE
Confidence 4689999999763 33333345555541 14999999999987665432 2456666666 566666 555699
Q ss_pred EEEEEcccHHHHHHHHHhCCCc----cceEEEecCCCCC
Q 012188 256 HIVAHSLGCILALALAVKHPGS----VKSLTLLAPPYYP 290 (468)
Q Consensus 256 ~lvGhS~Gg~ial~~a~~~p~~----v~~lVl~~p~~~~ 290 (468)
+|+|||+||.+|+.++.++|++ ++++|+++|....
T Consensus 152 ~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~ 190 (322)
T 3fak_A 152 SISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADM 190 (322)
T ss_dssp EEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCT
T ss_pred EEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEecC
Confidence 9999999999999999987765 9999999988755
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A | Back alignment and structure |
|---|
Probab=99.72 E-value=4e-17 Score=162.03 Aligned_cols=105 Identities=15% Similarity=0.169 Sum_probs=72.7
Q ss_pred CCCeEEEEecCCCCccc-----------hhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCC-------CCHHHHHHH
Q 012188 180 SSRDTLFVKTQGPSAFW-----------TETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSL-------YTVREHLDM 241 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~-----------~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~-------~t~~~~~~d 241 (468)
+.|+||++||++++... +..++..|. ++||+|+++|+||||.|....... .++.+.+++
T Consensus 78 ~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~G~~V~~~D~~G~G~s~~~~~~~~~~~~~~~~~~d~~~~ 154 (397)
T 3h2g_A 78 PYPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLA---SQGYVVVGSDYLGLGKSNYAYHPYLHSASEASATIDAMRA 154 (397)
T ss_dssp CEEEEEEECCCCCBTTCCHHHHHHHTTTCSHHHHTTG---GGTCEEEEECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCcCCCCcccccccccccchHHHHHHHH---HCCCEEEEecCCCCCCCCCCccchhhhhhHHHHHHHHHHH
Confidence 34788999998875431 222444443 589999999999999996543322 245555666
Q ss_pred HHHHHhcccCC---ceEEEEEEcccHHHHHHHHHh-CC----C-ccceEEEecCCC
Q 012188 242 IEKSVIEPNKV---KSFHIVAHSLGCILALALAVK-HP----G-SVKSLTLLAPPY 288 (468)
Q Consensus 242 i~~~l~~~l~~---~~i~lvGhS~Gg~ial~~a~~-~p----~-~v~~lVl~~p~~ 288 (468)
+ ..+++++++ ++++++||||||.+++.++.. .+ + .+.+++..+++.
T Consensus 155 ~-~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~ 209 (397)
T 3h2g_A 155 A-RSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLVASAPISGPY 209 (397)
T ss_dssp H-HHHHHHHTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTTSEEEEEEEESCCS
T ss_pred H-HHHHHhcCCCCCCcEEEEEECHHHHHHHHHHHHhhhhcCcCcceEEEecccccc
Confidence 6 567777776 699999999999999988732 22 1 466777766554
|
| >3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.72 E-value=7.4e-17 Score=155.06 Aligned_cols=225 Identities=9% Similarity=0.030 Sum_probs=133.6
Q ss_pred CCCceeEEEec---CCCCeEEEEecCC---CCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHH
Q 012188 168 DCDCKFCTCWS---SSSRDTLFVKTQG---PSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDM 241 (468)
Q Consensus 168 d~~~~~~~~~~---~~~p~vl~lHG~g---~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~d 241 (468)
||..+.++.+. ++.|+||++||+| ++...+..+...|.. +.||.|+++|+|+.+....+. .++|..+.
T Consensus 69 ~G~~i~~~~~~P~~~~~p~vv~~HGgG~~~g~~~~~~~~~~~la~--~~g~~vv~~dyr~~p~~~~p~----~~~D~~~a 142 (317)
T 3qh4_A 69 AGRPVPVRIYRAAPTPAPVVVYCHAGGFALGNLDTDHRQCLELAR--RARCAVVSVDYRLAPEHPYPA----ALHDAIEV 142 (317)
T ss_dssp TSCEEEEEEEECSCSSEEEEEEECCSTTTSCCTTTTHHHHHHHHH--HHTSEEEEECCCCTTTSCTTH----HHHHHHHH
T ss_pred CCCeEEEEEEecCCCCCcEEEEECCCcCccCChHHHHHHHHHHHH--HcCCEEEEecCCCCCCCCCch----HHHHHHHH
Confidence 44456655553 3458999999977 344434445555541 249999999999877654332 34455444
Q ss_pred HHHHHhcc---cCC--ceEEEEEEcccHHHHHHHHHhCCC----ccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCc
Q 012188 242 IEKSVIEP---NKV--KSFHIVAHSLGCILALALAVKHPG----SVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWP 312 (468)
Q Consensus 242 i~~~l~~~---l~~--~~i~lvGhS~Gg~ial~~a~~~p~----~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (468)
+ +.+.+. +++ ++++|+|||+||.+|+.++.++++ .++++++++|..... .. .... .......+.
T Consensus 143 ~-~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~-~~----~~~~-~~~~~~~~~ 215 (317)
T 3qh4_A 143 L-TWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVLDDR-PT----ASRS-EFRATPAFD 215 (317)
T ss_dssp H-HHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCEEEEESCCCCSS-CC----HHHH-HTTTCSSSC
T ss_pred H-HHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeEEEEECceecCC-CC----cCHH-HhcCCCCcC
Confidence 4 444443 454 489999999999999999998765 499999999887653 11 0000 000000000
Q ss_pred hhhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHh
Q 012188 313 LIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAV 392 (468)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (468)
.. .. ... ...++... ... ..........
T Consensus 216 ~~----~~----------------------~~~--------~~~~~~~~-----~~~-------------~~~~p~~~~~ 243 (317)
T 3qh4_A 216 GE----AA----------------------SLM--------WRHYLAGQ-----TPS-------------PESVPGRRGQ 243 (317)
T ss_dssp HH----HH----------------------HHH--------HHHHHTTC-----CCC-------------TTTCGGGCSC
T ss_pred HH----HH----------------------HHH--------HHHhcCCC-----CCC-------------cccCCCcccc
Confidence 00 00 000 00000000 000 0000000000
Q ss_pred hccCCCcEEEEeeCCCCccC--hhhHHHHHHhCCCCeEEEecCCCccccc----cCcHHHHHHHHHHHHhhc
Q 012188 393 RNHVKCDVNVFHGEDDELIP--VECSYNVQRKIPRARVKVIEKKDHITIV----VGRQKTFARELEEIWRSS 458 (468)
Q Consensus 393 ~~~i~~PvLii~G~~D~~vp--~~~~~~l~~~~p~~~l~~i~~~gH~~~~----~e~p~~~~~~i~~fl~~~ 458 (468)
+.. -.|+++++|++|.+++ ...++.+.+..+++++++++|++|.... .+.++++.+.+.+||++.
T Consensus 244 l~~-lpP~li~~G~~D~~~~~~~~~a~~l~~~g~~~~l~~~~g~~H~f~~~~~~~~~~~~~~~~~~~~l~~~ 314 (317)
T 3qh4_A 244 LAG-LPATLITCGEIDPFRDEVLDYAQRLLGAGVSTELHIFPRACHGFDSLLPEWTTSQRLFAMQGHALADA 314 (317)
T ss_dssp CTT-CCCEEEEEEEESTTHHHHHHHHHHHHHTTCCEEEEEEEEEETTHHHHCTTSHHHHHHHHHHHHHHHHH
T ss_pred cCC-CCceeEEecCcCCCchhHHHHHHHHHHcCCCEEEEEeCCCccchhhhcCCchHHHHHHHHHHHHHHHH
Confidence 111 2499999999999987 4556677666678899999999998432 156789999999999764
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=8e-17 Score=148.79 Aligned_cols=198 Identities=8% Similarity=0.007 Sum_probs=123.1
Q ss_pred CCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccC-CceEEE
Q 012188 179 SSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNK-VKSFHI 257 (468)
Q Consensus 179 ~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~-~~~i~l 257 (468)
+++++++++||++++...|..+.+.|. .+|+|+++|+||++. +++++ ...++.+. .+++++
T Consensus 20 ~~~~~l~~~hg~~~~~~~~~~~~~~l~----~~~~v~~~d~~g~~~-------------~~~~~-~~~i~~~~~~~~~~l 81 (244)
T 2cb9_A 20 QGGKNLFCFPPISGFGIYFKDLALQLN----HKAAVYGFHFIEEDS-------------RIEQY-VSRITEIQPEGPYVL 81 (244)
T ss_dssp CCSSEEEEECCTTCCGGGGHHHHHHTT----TTSEEEEECCCCSTT-------------HHHHH-HHHHHHHCSSSCEEE
T ss_pred CCCCCEEEECCCCCCHHHHHHHHHHhC----CCceEEEEcCCCHHH-------------HHHHH-HHHHHHhCCCCCEEE
Confidence 346799999999987776667888776 789999999999742 33444 24444443 468999
Q ss_pred EEEcccHHHHHHHHHhC---CCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHH
Q 012188 258 VAHSLGCILALALAVKH---PGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLL 334 (468)
Q Consensus 258 vGhS~Gg~ial~~a~~~---p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (468)
+||||||.+|+.+|.++ ++++.++|++++......... ...... +....
T Consensus 82 ~GhS~Gg~va~~~a~~~~~~~~~v~~lvl~~~~~~~~~~~~------------------~~~~~~-------~~~~~--- 133 (244)
T 2cb9_A 82 LGYSAGGNLAFEVVQAMEQKGLEVSDFIIVDAYKKDQSITA------------------DTENDD-------SAAYL--- 133 (244)
T ss_dssp EEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCCCSCCCC------------------C--------------CCS---
T ss_pred EEECHhHHHHHHHHHHHHHcCCCccEEEEEcCCCCcccccc------------------cccHHH-------HHHHh---
Confidence 99999999999999886 578999999997643210000 000000 00000
Q ss_pred hhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeC--CCCccC
Q 012188 335 ICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGE--DDELIP 412 (468)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~--~D~~vp 412 (468)
.......+.. .. ..+..+... ......+++|+++++|+ +|.+ +
T Consensus 134 -------~~~~~~~~~~-~~-----------------~~~~~~~~~---------~~~~~~i~~Pvl~i~g~~~~D~~-~ 178 (244)
T 2cb9_A 134 -------PEAVRETVMQ-KK-----------------RCYQEYWAQ---------LINEGRIKSNIHFIEAGIQTETS-G 178 (244)
T ss_dssp -------CHHHHHHHTH-HH-----------------HHHHHHHHH---------CCCCSCBSSEEEEEECSBCSCCC-H
T ss_pred -------HHHHHHHHHH-HH-----------------HHHHHHHHh---------hccCCCcCCCEEEEEccCccccc-c
Confidence 0000000000 00 000000000 00125678999999999 8874 4
Q ss_pred hhhHHHHHHhCC-CCeEEEecCCCc--cccccCcHHHHHHHHHHHHhhcC
Q 012188 413 VECSYNVQRKIP-RARVKVIEKKDH--ITIVVGRQKTFARELEEIWRSSS 459 (468)
Q Consensus 413 ~~~~~~l~~~~p-~~~l~~i~~~gH--~~~~~e~p~~~~~~i~~fl~~~~ 459 (468)
++....+.+..+ +.+++++++ || ++.. ++++.+++.|.+||++..
T Consensus 179 ~~~~~~w~~~~~~~~~~~~i~g-gH~~~~~~-~~~~~~~~~i~~~L~~~~ 226 (244)
T 2cb9_A 179 AMVLQKWQDAAEEGYAEYTGYG-AHKDMLEG-EFAEKNANIILNILDKIN 226 (244)
T ss_dssp HHHTTSSGGGBSSCEEEEECSS-BGGGTTSH-HHHHHHHHHHHHHHHTC-
T ss_pred ccchhHHHHhcCCCCEEEEecC-ChHHHcCh-HHHHHHHHHHHHHHhcCc
Confidence 444445555554 689999996 99 5553 789999999999998653
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.5e-16 Score=170.65 Aligned_cols=221 Identities=11% Similarity=0.028 Sum_probs=132.3
Q ss_pred CCCCceeEEEec-----CCCCeEEEEecCCCCcc---chhhhhhhccccCCCcceEEEECCCCCCCCCCC---CC----C
Q 012188 167 SDCDCKFCTCWS-----SSSRDTLFVKTQGPSAF---WTETLFPNFSSASKSTYRLFAIDLLGFGRSPKP---TD----S 231 (468)
Q Consensus 167 ~d~~~~~~~~~~-----~~~p~vl~lHG~g~s~~---~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~---~~----~ 231 (468)
.||..+.+..+. ++.|+||++||+++... |.. ....|. ++||.|+++|+||+|.+... .. .
T Consensus 469 ~dg~~i~~~~~~p~~~~~~~p~vl~~hGg~~~~~~~~~~~-~~~~l~---~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~ 544 (741)
T 1yr2_A 469 KDGTKVPMFIVRRKDAKGPLPTLLYGYGGFNVALTPWFSA-GFMTWI---DSGGAFALANLRGGGEYGDAWHDAGRRDKK 544 (741)
T ss_dssp TTSCEEEEEEEEETTCCSCCCEEEECCCCTTCCCCCCCCH-HHHHHH---TTTCEEEEECCTTSSTTHHHHHHTTSGGGT
T ss_pred CCCCEEEEEEEecCCCCCCCcEEEEECCCCCccCCCCcCH-HHHHHH---HCCcEEEEEecCCCCCCCHHHHHhhhhhcC
Confidence 356666665552 34689999999876443 322 233333 48999999999999987211 10 1
Q ss_pred CCCHHHHHHHHHHHHhcc--cCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCC
Q 012188 232 LYTVREHLDMIEKSVIEP--NKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRR 309 (468)
Q Consensus 232 ~~t~~~~~~di~~~l~~~--l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~ 309 (468)
...++|+++.+ +.++++ ...++++++|||+||++++.++.++|++++++|+.+|........
T Consensus 545 ~~~~~D~~~~~-~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~--------------- 608 (741)
T 1yr2_A 545 QNVFDDFIAAG-EWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDMLRFD--------------- 608 (741)
T ss_dssp HHHHHHHHHHH-HHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTSGG---------------
T ss_pred CCcHHHHHHHH-HHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCchhheEEEecCCcccccccc---------------
Confidence 12466777777 566655 345799999999999999999999999999999999876431100
Q ss_pred CCchhhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchH
Q 012188 310 VWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYL 389 (468)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (468)
....+. .|...+ ..+...+ . ...+.. .. .
T Consensus 609 ---~~~~~~---~~~~~~---------g~~~~~~---------~-~~~~~~-------------------~s-------p 637 (741)
T 1yr2_A 609 ---QFTAGR---YWVDDY---------GYPEKEA---------D-WRVLRR-------------------YS-------P 637 (741)
T ss_dssp ---GSTTGG---GGHHHH---------CCTTSHH---------H-HHHHHT-------------------TC-------G
T ss_pred ---CCCCCc---hhHHHc---------CCCCCHH---------H-HHHHHH-------------------cC-------c
Confidence 000000 000000 0000000 0 000000 00 0
Q ss_pred HHhhcc-CCC-cEEEEeeCCCCccChhhHHHHHHhCCC-------CeEEEecCCCcccccc-CcHHHHHHHHHHHHhhc
Q 012188 390 DAVRNH-VKC-DVNVFHGEDDELIPVECSYNVQRKIPR-------ARVKVIEKKDHITIVV-GRQKTFARELEEIWRSS 458 (468)
Q Consensus 390 ~~~~~~-i~~-PvLii~G~~D~~vp~~~~~~l~~~~p~-------~~l~~i~~~gH~~~~~-e~p~~~~~~i~~fl~~~ 458 (468)
...+.. +++ |+|+++|++|..+|+..+.++.+.+++ +++++++++||..... +++.++.+.+.+||.+.
T Consensus 638 ~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~g~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 716 (741)
T 1yr2_A 638 YHNVRSGVDYPAILVTTADTDDRVVPGHSFKYTAALQTAAIGPKPHLIRIETRAGHGSGKPIDKQIEETADVQAFLAHF 716 (741)
T ss_dssp GGCCCTTSCCCEEEEEECSCCSSSCTHHHHHHHHHHHHSCCCSSCEEEEEC---------CHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhccCCCCCEEEEeeCCCCCCChhHHHHHHHHHhhhhcCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 011233 564 999999999999999999888887655 6899999999997641 23457888999999765
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.70 E-value=2e-16 Score=168.45 Aligned_cols=221 Identities=12% Similarity=0.047 Sum_probs=137.4
Q ss_pred CCCceeEEEe-------cCCCCeEEEEecCCCCcc---chhhhhhhccccCCCcceEEEECCCCCCCCCCC---CC----
Q 012188 168 DCDCKFCTCW-------SSSSRDTLFVKTQGPSAF---WTETLFPNFSSASKSTYRLFAIDLLGFGRSPKP---TD---- 230 (468)
Q Consensus 168 d~~~~~~~~~-------~~~~p~vl~lHG~g~s~~---~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~---~~---- 230 (468)
||..+.+..+ .++.|+||++||+++... |.. ....|. ++||.|+++|+||+|.+... ..
T Consensus 426 dg~~i~~~~~~p~~~~~~~~~p~vl~~hGg~~~~~~~~~~~-~~~~l~---~~G~~v~~~d~rG~g~~g~~~~~~~~~~~ 501 (695)
T 2bkl_A 426 DGTKVPMFVVHRKDLKRDGNAPTLLYGYGGFNVNMEANFRS-SILPWL---DAGGVYAVANLRGGGEYGKAWHDAGRLDK 501 (695)
T ss_dssp TSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCG-GGHHHH---HTTCEEEEECCTTSSTTCHHHHHTTSGGG
T ss_pred CCCEEEEEEEECCCCCCCCCccEEEEECCCCccccCCCcCH-HHHHHH---hCCCEEEEEecCCCCCcCHHHHHhhHhhc
Confidence 5666666554 134688999999765432 332 333232 48999999999998876321 11
Q ss_pred CCCCHHHHHHHHHHHHhccc--CCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCC
Q 012188 231 SLYTVREHLDMIEKSVIEPN--KVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPR 308 (468)
Q Consensus 231 ~~~t~~~~~~di~~~l~~~l--~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~ 308 (468)
....++|+.+.+ ..++++. ..++++++||||||++++.++.++|++++++|+.+|........
T Consensus 502 ~~~~~~D~~~~~-~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~-------------- 566 (695)
T 2bkl_A 502 KQNVFDDFHAAA-EYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPELYGAVVCAVPLLDMVRYH-------------- 566 (695)
T ss_dssp THHHHHHHHHHH-HHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGG--------------
T ss_pred CCCcHHHHHHHH-HHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCCcceEEEEEcCCccchhhcc--------------
Confidence 112345566555 4555542 34689999999999999999999999999999999876431100
Q ss_pred CCCchhhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccch
Q 012188 309 RVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGY 388 (468)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (468)
....+ ..|...+ . .+...+ .+..+... .
T Consensus 567 ----~~~~~---~~~~~~~--------g-~~~~~~--------------------------~~~~~~~~----------s 594 (695)
T 2bkl_A 567 ----LFGSG---RTWIPEY--------G-TAEKPE--------------------------DFKTLHAY----------S 594 (695)
T ss_dssp ----GSTTG---GGGHHHH--------C-CTTSHH--------------------------HHHHHHHH----------C
T ss_pred ----ccCCC---cchHHHh--------C-CCCCHH--------------------------HHHHHHhc----------C
Confidence 00000 0000000 0 000000 00000000 0
Q ss_pred HHHhhccCC--CcEEEEeeCCCCccChhhHHHHHHhCCC-------CeEEEecCCCccccc-cCcHHHHHHHHHHHHhhc
Q 012188 389 LDAVRNHVK--CDVNVFHGEDDELIPVECSYNVQRKIPR-------ARVKVIEKKDHITIV-VGRQKTFARELEEIWRSS 458 (468)
Q Consensus 389 ~~~~~~~i~--~PvLii~G~~D~~vp~~~~~~l~~~~p~-------~~l~~i~~~gH~~~~-~e~p~~~~~~i~~fl~~~ 458 (468)
....+.+++ .|+|+++|++|..+|+..++++.+.++. +++++++++||.... .+++.++.+.+.+||.+.
T Consensus 595 p~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 674 (695)
T 2bkl_A 595 PYHHVRPDVRYPALLMMAADHDDRVDPMHARKFVAAVQNSPGNPATALLRIEANAGHGGADQVAKAIESSVDLYSFLFQV 674 (695)
T ss_dssp GGGCCCSSCCCCEEEEEEETTCSSSCTHHHHHHHHHHHTSTTCCSCEEEEEETTCBTTBCSCHHHHHHHHHHHHHHHHHH
T ss_pred hHhhhhhcCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhhccCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 000113333 6999999999999999999988887644 689999999999742 145677888899999875
Q ss_pred C
Q 012188 459 S 459 (468)
Q Consensus 459 ~ 459 (468)
-
T Consensus 675 l 675 (695)
T 2bkl_A 675 L 675 (695)
T ss_dssp T
T ss_pred c
Confidence 3
|
| >3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.70 E-value=4.8e-16 Score=146.19 Aligned_cols=106 Identities=16% Similarity=0.100 Sum_probs=72.0
Q ss_pred CCeEEEEecCCCCccchhh---hhhhccccCCCcceEEEECCCCCCCCCCCCC--------------------CCCC-HH
Q 012188 181 SRDTLFVKTQGPSAFWTET---LFPNFSSASKSTYRLFAIDLLGFGRSPKPTD--------------------SLYT-VR 236 (468)
Q Consensus 181 ~p~vl~lHG~g~s~~~~~~---~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~--------------------~~~t-~~ 236 (468)
.|+||++||++++...+.. +...+. +.||.|+++|.+++|.+..... ..+. ..
T Consensus 45 ~P~vv~lHG~~~~~~~~~~~~~~~~~~~---~~g~~vv~~d~~~~g~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~ 121 (280)
T 3ls2_A 45 VPVLYWLSGLTCTDENFMQKAGAFKKAA---ELGIAIVAPDTSPRGDNVPNEDSYDFAQGAGFYVNATQAPYNTHFNMYD 121 (280)
T ss_dssp EEEEEEECCTTCCSHHHHHHSCCHHHHH---HHTCEEEECCSSCCSTTSCCCSCTTSSTTCCTTCBCCSTTTTTTCBHHH
T ss_pred cCEEEEeCCCCCChhhhhcchhHHHHHh---hCCeEEEEeCCcccccccccccccccccCCccccccccccccccccHHH
Confidence 3789999998876543322 222222 3699999999987776522110 0112 23
Q ss_pred HHHHHHHHHHhcccCC-ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCC
Q 012188 237 EHLDMIEKSVIEPNKV-KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYY 289 (468)
Q Consensus 237 ~~~~di~~~l~~~l~~-~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~ 289 (468)
...+++...+.+.+.. ++++|+||||||.+|+.++.++|+.++++++++|...
T Consensus 122 ~~~~~~~~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~ 175 (280)
T 3ls2_A 122 YVVNELPALIEQHFPVTSTKAISGHSMGGHGALMIALKNPQDYVSASAFSPIVN 175 (280)
T ss_dssp HHHTHHHHHHHHHSSEEEEEEEEEBTHHHHHHHHHHHHSTTTCSCEEEESCCSC
T ss_pred HHHHHHHHHHHhhCCCCCCeEEEEECHHHHHHHHHHHhCchhheEEEEecCccC
Confidence 3344553333334443 7899999999999999999999999999999998654
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A | Back alignment and structure |
|---|
Probab=99.70 E-value=1.4e-16 Score=150.62 Aligned_cols=97 Identities=15% Similarity=0.162 Sum_probs=79.4
Q ss_pred cCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCC-ceEE
Q 012188 178 SSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKV-KSFH 256 (468)
Q Consensus 178 ~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~-~~i~ 256 (468)
++++++||++||++++...|..+.+.|. ++|+++|+++. ...++++++++++ ..+++.++. ++++
T Consensus 21 ~~~~~~l~~~hg~~~~~~~~~~~~~~L~------~~v~~~d~~~~-------~~~~~~~~~a~~~-~~~i~~~~~~~~~~ 86 (283)
T 3tjm_A 21 QSSERPLFLVHPIEGSTTVFHSLASRLS------IPTYGLQCTRA-------APLDSIHSLAAYY-IDCIRQVQPEGPYR 86 (283)
T ss_dssp CSSSCCEEEECCTTCCSGGGHHHHHHCS------SCEEEECCCTT-------SCCSCHHHHHHHH-HHHHTTTCCSSCCE
T ss_pred CCCCCeEEEECCCCCCHHHHHHHHHhcC------ceEEEEecCCC-------CCCCCHHHHHHHH-HHHHHHhCCCCCEE
Confidence 4457899999999987776666777663 99999999752 1246899999999 577777754 7999
Q ss_pred EEEEcccHHHHHHHHHhC---CCccc---eEEEecCCC
Q 012188 257 IVAHSLGCILALALAVKH---PGSVK---SLTLLAPPY 288 (468)
Q Consensus 257 lvGhS~Gg~ial~~a~~~---p~~v~---~lVl~~p~~ 288 (468)
++||||||.+|+.+|.++ |+++. ++|++++..
T Consensus 87 l~GhS~Gg~va~~~a~~~~~~~~~v~~~~~lvlid~~~ 124 (283)
T 3tjm_A 87 VAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSP 124 (283)
T ss_dssp EEEETHHHHHHHHHHHHHHHHHTTSCCCCEEEEESCCT
T ss_pred EEEECHhHHHHHHHHHHHHHcCCCCCccceEEEEcCCc
Confidence 999999999999999876 88899 999999743
|
| >3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=2.1e-16 Score=154.95 Aligned_cols=221 Identities=12% Similarity=0.037 Sum_probs=125.6
Q ss_pred CCCeEEEEecCCC---Cccc--hhhhhhhccccCCC-cceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcc----
Q 012188 180 SSRDTLFVKTQGP---SAFW--TETLFPNFSSASKS-TYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEP---- 249 (468)
Q Consensus 180 ~~p~vl~lHG~g~---s~~~--~~~~~~~L~~~~~~-gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~---- 249 (468)
+.|+||++||+|. +..+ +..+...|+ ++ ||.|+++|+|+.+....+ ..++|..+.+ ..+.+.
T Consensus 111 ~~Pvvv~~HGGg~~~g~~~~~~~~~~~~~la---~~~g~~Vv~~dyR~~p~~~~~----~~~~D~~~a~-~~l~~~~~~~ 182 (365)
T 3ebl_A 111 PFPVIIFFHGGSFVHSSASSTIYDSLCRRFV---KLSKGVVVSVNYRRAPEHRYP----CAYDDGWTAL-KWVMSQPFMR 182 (365)
T ss_dssp CCEEEEEECCSTTTSCCTTBHHHHHHHHHHH---HHHTSEEEEECCCCTTTSCTT----HHHHHHHHHH-HHHHHCTTTE
T ss_pred cceEEEEEcCCccccCCCchhhHHHHHHHHH---HHCCCEEEEeeCCCCCCCCCc----HHHHHHHHHH-HHHHhCchhh
Confidence 4589999999864 2222 334555554 33 999999999986544322 2345555555 455532
Q ss_pred --cCCc-eEEEEEEcccHHHHHHHHHhCCC---ccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHH
Q 012188 250 --NKVK-SFHIVAHSLGCILALALAVKHPG---SVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACW 323 (468)
Q Consensus 250 --l~~~-~i~lvGhS~Gg~ial~~a~~~p~---~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (468)
.+.+ +++|+|||+||.+|+.++.+.++ .++++|+++|......... .. .. ......... ..
T Consensus 183 ~~~d~~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~g~vl~~p~~~~~~~~~---~~-~~-~~~~~~~~~-----~~--- 249 (365)
T 3ebl_A 183 SGGDAQARVFLSGDSSGGNIAHHVAVRAADEGVKVCGNILLNAMFGGTERTE---SE-RR-LDGKYFVTL-----QD--- 249 (365)
T ss_dssp ETTTTEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCEEEEESCCCCCSSCCH---HH-HH-HTTTSSCCH-----HH---
T ss_pred hCCCCCCcEEEEeeCccHHHHHHHHHHHHhcCCceeeEEEEccccCCCcCCh---hh-hh-cCCCcccCH-----HH---
Confidence 3345 89999999999999999998776 7999999998765422210 00 00 000000000 00
Q ss_pred HHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCC-CcEEE
Q 012188 324 YEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVK-CDVNV 402 (468)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~PvLi 402 (468)
.+.... .+....... .... . . .... ....+..+. .|+|+
T Consensus 250 ------------------~~~~~~--------~~~~~~~~~---~~~~---~----~---p~~~-~~~~l~~~~~pP~Li 289 (365)
T 3ebl_A 250 ------------------RDWYWK--------AYLPEDADR---DHPA---C----N---PFGP-NGRRLGGLPFAKSLI 289 (365)
T ss_dssp ------------------HHHHHH--------HHSCTTCCT---TSTT---T----C---TTST-TCCCCTTSCCCCEEE
T ss_pred ------------------HHHHHH--------HhCCCCCCC---CCcc---c----C---CCCC-cchhhccCCCCCEEE
Confidence 000000 000000000 0000 0 0 0000 000012112 58999
Q ss_pred EeeCCCCccChh--hHHHHHHhCCCCeEEEecCCCccccc---cCcHHHHHHHHHHHHhhcCCC
Q 012188 403 FHGEDDELIPVE--CSYNVQRKIPRARVKVIEKKDHITIV---VGRQKTFARELEEIWRSSSGH 461 (468)
Q Consensus 403 i~G~~D~~vp~~--~~~~l~~~~p~~~l~~i~~~gH~~~~---~e~p~~~~~~i~~fl~~~~~~ 461 (468)
++|++|.+++.. ..+.+.+.-..+++++++|++|..+. .++.+++.+.+.+||++....
T Consensus 290 ~~G~~D~l~~~~~~~~~~L~~~g~~v~l~~~~g~~H~f~~~~~~~~~~~~~~~i~~Fl~~~~~~ 353 (365)
T 3ebl_A 290 IVSGLDLTCDRQLAYADALREDGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNANLYY 353 (365)
T ss_dssp EEETTSTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSSCSHHHHHHHHHHHHHHHHHCC-
T ss_pred EEcCcccchhHHHHHHHHHHHCCCCEEEEEECCCcEEEeccCCCHHHHHHHHHHHHHHHHhhhc
Confidence 999999877542 23344444456799999999998762 256789999999999886543
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 | Back alignment and structure |
|---|
Probab=99.69 E-value=2.5e-16 Score=143.75 Aligned_cols=206 Identities=14% Similarity=0.085 Sum_probs=121.6
Q ss_pred CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccC-CceEEEE
Q 012188 180 SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNK-VKSFHIV 258 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~-~~~i~lv 258 (468)
++++++++||++++...+..+.+.|. . |+|+++|+||+|.. ..++. .+++.+. .++++++
T Consensus 16 ~~~~l~~~hg~~~~~~~~~~~~~~l~----~-~~v~~~d~~g~~~~---------~~~~~-----~~i~~~~~~~~~~l~ 76 (230)
T 1jmk_C 16 QEQIIFAFPPVLGYGLMYQNLSSRLP----S-YKLCAFDFIEEEDR---------LDRYA-----DLIQKLQPEGPLTLF 76 (230)
T ss_dssp CSEEEEEECCTTCCGGGGHHHHHHCT----T-EEEEEECCCCSTTH---------HHHHH-----HHHHHHCCSSCEEEE
T ss_pred CCCCEEEECCCCCchHHHHHHHHhcC----C-CeEEEecCCCHHHH---------HHHHH-----HHHHHhCCCCCeEEE
Confidence 46789999999987776666778776 6 99999999998732 23333 3333333 3589999
Q ss_pred EEcccHHHHHHHHHhCC---CccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHHh
Q 012188 259 AHSLGCILALALAVKHP---GSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLI 335 (468)
Q Consensus 259 GhS~Gg~ial~~a~~~p---~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (468)
||||||.+|+.+|.+++ +.++++|++++........ .. . .........+......
T Consensus 77 G~S~Gg~ia~~~a~~~~~~~~~v~~lvl~~~~~~~~~~~---~~---~----------~~~~~~~~~~~~~~~~------ 134 (230)
T 1jmk_C 77 GYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSD---LD---G----------RTVESDVEALMNVNRD------ 134 (230)
T ss_dssp EETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC------------------------CCHHHHHHHTTT------
T ss_pred EECHhHHHHHHHHHHHHHcCCCccEEEEECCCCCCcccc---cc---c----------ccHHHHHHHHHhcChh------
Confidence 99999999999998864 6799999999754321100 00 0 0000000000000000
Q ss_pred hccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChhh
Q 012188 336 CKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVEC 415 (468)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~ 415 (468)
........... .+... .......... ......+++|+++++|++|..+|. .
T Consensus 135 -~~~~~~~~~~~-----~~~~~-------------~~~~~~~~~~---------~~~~~~~~~P~l~i~g~~D~~~~~-~ 185 (230)
T 1jmk_C 135 -NEALNSEAVKH-----GLKQK-------------THAFYSYYVN---------LISTGQVKADIDLLTSGADFDIPE-W 185 (230)
T ss_dssp -CSGGGSHHHHH-----HHHHH-------------HHHHHHHHHH---------CCCCSCBSSEEEEEECSSCCCCCT-T
T ss_pred -hhhhhhHHHHH-----HHHHH-------------HHHHHHHhhh---------ccccccccccEEEEEeCCCCCCcc-c
Confidence 00000000000 00000 0000000000 011257799999999999998873 3
Q ss_pred HHHHHHhCC-CCeEEEecCCCc--cccccCcHHHHHHHHHHHHhh
Q 012188 416 SYNVQRKIP-RARVKVIEKKDH--ITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 416 ~~~l~~~~p-~~~l~~i~~~gH--~~~~~e~p~~~~~~i~~fl~~ 457 (468)
...+.+..+ +.++++++| || ++.. ++++.+++.|.+||++
T Consensus 186 ~~~w~~~~~~~~~~~~i~g-~H~~~~~~-~~~~~~~~~i~~~l~~ 228 (230)
T 1jmk_C 186 LASWEEATTGAYRMKRGFG-THAEMLQG-ETLDRNAGILLEFLNT 228 (230)
T ss_dssp EECSGGGBSSCEEEEECSS-CGGGTTSH-HHHHHHHHHHHHHHTC
T ss_pred cchHHHhcCCCeEEEEecC-ChHHHcCc-HhHHHHHHHHHHHHhh
Confidence 334444443 579999997 99 6664 7899999999999965
|
| >1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A | Back alignment and structure |
|---|
Probab=99.69 E-value=2e-17 Score=155.78 Aligned_cols=106 Identities=9% Similarity=0.154 Sum_probs=78.8
Q ss_pred CCeEEEEecCCCCc---cchhhhhhhccccCCCcceEEEECCCCCCCCCCCCC-CCCCHHHHHHHHHHHHhcccC-C-ce
Q 012188 181 SRDTLFVKTQGPSA---FWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD-SLYTVREHLDMIEKSVIEPNK-V-KS 254 (468)
Q Consensus 181 ~p~vl~lHG~g~s~---~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~-~~~t~~~~~~di~~~l~~~l~-~-~~ 254 (468)
.+||||+||++++. ..+..+.+.|++. -.||+|+++|+ |||.|+.+.. ...++.+.++++. ..++... . ++
T Consensus 5 ~~pvVllHG~~~~~~~~~~~~~~~~~L~~~-~~g~~v~~~d~-G~g~s~~~~~~~~~~~~~~~~~~~-~~l~~~~~l~~~ 81 (279)
T 1ei9_A 5 PLPLVIWHGMGDSCCNPLSMGAIKKMVEKK-IPGIHVLSLEI-GKTLREDVENSFFLNVNSQVTTVC-QILAKDPKLQQG 81 (279)
T ss_dssp SCCEEEECCTTCCSCCTTTTHHHHHHHHHH-STTCCEEECCC-SSSHHHHHHHHHHSCHHHHHHHHH-HHHHSCGGGTTC
T ss_pred CCcEEEECCCCCCCCCcccHHHHHHHHHHH-CCCcEEEEEEe-CCCCccccccccccCHHHHHHHHH-HHHHhhhhccCC
Confidence 46799999988765 4444578888721 12779999998 9998852211 1246777777773 4444421 1 78
Q ss_pred EEEEEEcccHHHHHHHHHhCCCc-cceEEEecCCCC
Q 012188 255 FHIVAHSLGCILALALAVKHPGS-VKSLTLLAPPYY 289 (468)
Q Consensus 255 i~lvGhS~Gg~ial~~a~~~p~~-v~~lVl~~p~~~ 289 (468)
+++|||||||.++..++.++|+. |+++|+++++..
T Consensus 82 ~~lvGhSmGG~ia~~~a~~~~~~~v~~lv~~~~p~~ 117 (279)
T 1ei9_A 82 YNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQHQ 117 (279)
T ss_dssp EEEEEETTHHHHHHHHHHHCCSSCEEEEEEESCCTT
T ss_pred EEEEEECHHHHHHHHHHHHcCCcccceEEEecCccC
Confidence 99999999999999999999984 999999997654
|
| >3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.69 E-value=2.1e-16 Score=148.59 Aligned_cols=105 Identities=20% Similarity=0.187 Sum_probs=71.0
Q ss_pred CCeEEEEecCCCCccchhhh---hhhccccCCCcceEEEECC--CCCCCCCCC-------CCCCC------------C-H
Q 012188 181 SRDTLFVKTQGPSAFWTETL---FPNFSSASKSTYRLFAIDL--LGFGRSPKP-------TDSLY------------T-V 235 (468)
Q Consensus 181 ~p~vl~lHG~g~s~~~~~~~---~~~L~~~~~~gy~Via~D~--~G~G~S~~~-------~~~~~------------t-~ 235 (468)
.|+||++||++++...+... ...+. +.||.|+++|+ ||+|.+... ....| . .
T Consensus 45 ~p~vv~lHG~~~~~~~~~~~~~~~~~~~---~~g~~vv~~d~~~rG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 121 (282)
T 3fcx_A 45 CPALYWLSGLTCTEQNFISKSGYHQSAS---EHGLVVIAPDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMY 121 (282)
T ss_dssp EEEEEEECCTTCCSHHHHHHSCCHHHHH---HHTCEEEEECSCSSCCCC--------CCCCCCTTCBCCSTTHHHHCBHH
T ss_pred CCEEEEEcCCCCCccchhhcchHHHHhh---cCCeEEEEeccccCccccccccccccccCCcccccccCcccccchhhHH
Confidence 47899999988765433223 23333 47999999999 776654211 00000 1 2
Q ss_pred HHHHHHHHHHHhc-ccCC--ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCC
Q 012188 236 REHLDMIEKSVIE-PNKV--KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYY 289 (468)
Q Consensus 236 ~~~~~di~~~l~~-~l~~--~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~ 289 (468)
...++++. .+++ .+++ ++++++||||||.+|+.+|.++|+.++++++++|...
T Consensus 122 ~~~~~~~~-~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~ 177 (282)
T 3fcx_A 122 SYVTEELP-QLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICN 177 (282)
T ss_dssp HHHHTHHH-HHHHHHSSEEEEEEEEEEETHHHHHHHHHHHTSTTTSSCEEEESCCCC
T ss_pred HHHHHHHH-HHHHHHcCCCccceEEEEECchHHHHHHHHHhCcccceEEEEeCCccC
Confidence 23344553 3333 5554 6899999999999999999999999999999998764
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=1.4e-16 Score=170.12 Aligned_cols=220 Identities=10% Similarity=0.007 Sum_probs=138.0
Q ss_pred CCCceeEEEe-------cCCCCeEEEEecCCCCcc---chhhhhhhccccCC-CcceEEEECCCCCCCCCCC-------C
Q 012188 168 DCDCKFCTCW-------SSSSRDTLFVKTQGPSAF---WTETLFPNFSSASK-STYRLFAIDLLGFGRSPKP-------T 229 (468)
Q Consensus 168 d~~~~~~~~~-------~~~~p~vl~lHG~g~s~~---~~~~~~~~L~~~~~-~gy~Via~D~~G~G~S~~~-------~ 229 (468)
||..+.+..+ .++.|+||++||+++... |.. ....+. + +||.|+++|+||+|.+... .
T Consensus 446 dg~~i~~~~~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~-~~~~l~---~~~G~~v~~~d~rG~g~~g~~~~~~~~~~ 521 (710)
T 2xdw_A 446 DGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSV-SRLIFV---RHMGGVLAVANIRGGGEYGETWHKGGILA 521 (710)
T ss_dssp TSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCH-HHHHHH---HHHCCEEEEECCTTSSTTHHHHHHTTSGG
T ss_pred CCCEEEEEEEecCCCCCCCCccEEEEEcCCCCCcCCCcccH-HHHHHH---HhCCcEEEEEccCCCCCCChHHHHhhhhh
Confidence 5666665554 134689999999876443 222 222332 4 7999999999999976311 0
Q ss_pred CCCCCHHHHHHHHHHHHhcc--cCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcC
Q 012188 230 DSLYTVREHLDMIEKSVIEP--NKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAP 307 (468)
Q Consensus 230 ~~~~t~~~~~~di~~~l~~~--l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~ 307 (468)
.....++|+++.+ ..++++ .+.++++++|||+||++++.++.++|++++++|+.+|........
T Consensus 522 ~~~~~~~D~~~~~-~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~~d~~~~~------------- 587 (710)
T 2xdw_A 522 NKQNCFDDFQCAA-EYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFH------------- 587 (710)
T ss_dssp GTHHHHHHHHHHH-HHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGG-------------
T ss_pred cCCchHHHHHHHH-HHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCccceeEEEEcCCcccHhhcc-------------
Confidence 1122456666666 466554 345789999999999999999999999999999999876431100
Q ss_pred CCCCchhhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccc
Q 012188 308 RRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDG 387 (468)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (468)
....+ ..|...+ ..+...+. +..+... .
T Consensus 588 -----~~~~~---~~~~~~~---------g~~~~~~~--------------------------~~~~~~~---s------ 615 (710)
T 2xdw_A 588 -----KYTIG---HAWTTDY---------GCSDSKQH--------------------------FEWLIKY---S------ 615 (710)
T ss_dssp -----GSTTG---GGGHHHH---------CCTTSHHH--------------------------HHHHHHH---C------
T ss_pred -----ccCCC---hhHHHhC---------CCCCCHHH--------------------------HHHHHHh---C------
Confidence 00000 0000000 00000000 0000000 0
Q ss_pred hHHHhhc-----cCCC-cEEEEeeCCCCccChhhHHHHHHhCCC-----------CeEEEecCCCcccccc-CcHHHHHH
Q 012188 388 YLDAVRN-----HVKC-DVNVFHGEDDELIPVECSYNVQRKIPR-----------ARVKVIEKKDHITIVV-GRQKTFAR 449 (468)
Q Consensus 388 ~~~~~~~-----~i~~-PvLii~G~~D~~vp~~~~~~l~~~~p~-----------~~l~~i~~~gH~~~~~-e~p~~~~~ 449 (468)
....+. ++++ |+|+++|++|..+|+..+.++.+.+++ +++++++++||..... +++.++.+
T Consensus 616 -p~~~~~~~~~~~~~~pP~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~ 694 (710)
T 2xdw_A 616 -PLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGKPTAKVIEEVS 694 (710)
T ss_dssp -GGGCCCCCSSTTCCCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEESSCCSSTTCCHHHHHHHHH
T ss_pred -cHhhhcccccccCCCCcEEEEEeCCCCccChhHHHHHHHHHHhhhccccCCCcCEEEEEeCCCCcCCCCCHHHHHHHHH
Confidence 000112 5676 999999999999999998888776653 3899999999997642 23568888
Q ss_pred HHHHHHhhc
Q 012188 450 ELEEIWRSS 458 (468)
Q Consensus 450 ~i~~fl~~~ 458 (468)
.+.+||.+.
T Consensus 695 ~~~~fl~~~ 703 (710)
T 2xdw_A 695 DMFAFIARC 703 (710)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999764
|
| >4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.67 E-value=3.3e-15 Score=146.29 Aligned_cols=109 Identities=11% Similarity=0.041 Sum_probs=71.3
Q ss_pred CCeEEEEecCCCCccchh-----hhhhhccccC-CCcceEEEECCCCCCCCCCCCCCCC-------CHHHHHHHHHHHHh
Q 012188 181 SRDTLFVKTQGPSAFWTE-----TLFPNFSSAS-KSTYRLFAIDLLGFGRSPKPTDSLY-------TVREHLDMIEKSVI 247 (468)
Q Consensus 181 ~p~vl~lHG~g~s~~~~~-----~~~~~L~~~~-~~gy~Via~D~~G~G~S~~~~~~~~-------t~~~~~~di~~~l~ 247 (468)
.|.|++.||.+....... ........++ ++||+|+++|+||+|.|.+...... ++.|.++++ ..++
T Consensus 74 ~PvV~~~HG~~~~~~~~ps~~~~~~~~~~~~lal~~Gy~Vv~~D~rG~G~s~~~~~~~~~~~~~~~~~~D~~~a~-~~~~ 152 (377)
T 4ezi_A 74 VGIISYQHGTRFERNDVPSRNNEKNYIYLAAYGNSAGYMTVMPDYLGLGDNELTLHPYVQAETLASSSIDMLFAA-KELA 152 (377)
T ss_dssp EEEEEEECCCCCSTTCSGGGCCGGGHHHHHHHTTTTCCEEEEECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHH-HHHH
T ss_pred CcEEEEeCCCcCCcccCCCcCcccchHHHHHHHHhCCcEEEEeCCCCCCCCCCCCcccccchhHHHHHHHHHHHH-HHHh
Confidence 478999999875321100 0011111223 5999999999999999976322111 122233333 3455
Q ss_pred cccCC---ceEEEEEEcccHHHHHHHHHhCCC-----ccceEEEecCCCCC
Q 012188 248 EPNKV---KSFHIVAHSLGCILALALAVKHPG-----SVKSLTLLAPPYYP 290 (468)
Q Consensus 248 ~~l~~---~~i~lvGhS~Gg~ial~~a~~~p~-----~v~~lVl~~p~~~~ 290 (468)
+.+++ ++++++||||||.+++.+|..+|+ .+.+.+..+++...
T Consensus 153 ~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~l~l~g~~~~~~p~dl 203 (377)
T 4ezi_A 153 NRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYPDLPVSAVAPGSAPYGW 203 (377)
T ss_dssp HHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTSCCCEEEEESCCCCH
T ss_pred hccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCCCCceEEEEecCcccCH
Confidence 55554 689999999999999999988654 58888888887643
|
| >3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=99.67 E-value=2e-15 Score=144.03 Aligned_cols=118 Identities=11% Similarity=0.106 Sum_probs=82.2
Q ss_pred CCCceeEEEec-----CCCCeEEEEecCCCCccch-hhhhhhccccCCCcceEEEECCC------------CC--CCCCC
Q 012188 168 DCDCKFCTCWS-----SSSRDTLFVKTQGPSAFWT-ETLFPNFSSASKSTYRLFAIDLL------------GF--GRSPK 227 (468)
Q Consensus 168 d~~~~~~~~~~-----~~~p~vl~lHG~g~s~~~~-~~~~~~L~~~~~~gy~Via~D~~------------G~--G~S~~ 227 (468)
++..+.++.+. ++.|+||++||++.+...+ ..+.+.+. +.||.|+++|+| |+ |.|..
T Consensus 36 ~~~~l~~~~~~P~~~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~---~~g~~v~~~d~~~~~~p~~~~~~~g~~~g~s~~ 112 (304)
T 3d0k_A 36 ADRPFTLNTYRPYGYTPDRPVVVVQHGVLRNGADYRDFWIPAAD---RHKLLIVAPTFSDEIWPGVESYNNGRAFTAAGN 112 (304)
T ss_dssp TTCCEEEEEEECTTCCTTSCEEEEECCTTCCHHHHHHHTHHHHH---HHTCEEEEEECCTTTSCHHHHTTTTTCBCTTSC
T ss_pred CCceEEEEEEeCCCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHH---HCCcEEEEeCCccccCCCccccccCccccccCC
Confidence 34445555442 3458999999998865433 44555554 479999999999 66 77755
Q ss_pred CCC-CCCCHHHHHHHHHHHHhccc--CCceEEEEEEcccHHHHHHHHHhCCC-ccceEEEecCCCC
Q 012188 228 PTD-SLYTVREHLDMIEKSVIEPN--KVKSFHIVAHSLGCILALALAVKHPG-SVKSLTLLAPPYY 289 (468)
Q Consensus 228 ~~~-~~~t~~~~~~di~~~l~~~l--~~~~i~lvGhS~Gg~ial~~a~~~p~-~v~~lVl~~p~~~ 289 (468)
+.. ....+++..+.+ ..+.+.. ..++++|+||||||.+++.++.++|+ +++++|+.+++..
T Consensus 113 ~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~~vl~~~~~~ 177 (304)
T 3d0k_A 113 PRHVDGWTYALVARVL-ANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAPFHAVTAANPGWY 177 (304)
T ss_dssp BCCGGGSTTHHHHHHH-HHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTTCSEEEEESCSSC
T ss_pred CCcccchHHHHHHHHH-HHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCceEEEEEecCccc
Confidence 421 123444444444 4555543 45799999999999999999999995 8999998886553
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A | Back alignment and structure |
|---|
Probab=99.67 E-value=8.2e-16 Score=151.63 Aligned_cols=185 Identities=14% Similarity=0.077 Sum_probs=127.3
Q ss_pred CCCceeEEEecCC-------CCeEEEEecCCCCcc-chhhhh-----hhcc---ccCCCcceEEEECCCCCCCCCCCC--
Q 012188 168 DCDCKFCTCWSSS-------SRDTLFVKTQGPSAF-WTETLF-----PNFS---SASKSTYRLFAIDLLGFGRSPKPT-- 229 (468)
Q Consensus 168 d~~~~~~~~~~~~-------~p~vl~lHG~g~s~~-~~~~~~-----~~L~---~~~~~gy~Via~D~~G~G~S~~~~-- 229 (468)
||..+.+..|.+. .|+||++||++++.. +..++. ..+. .....++.|+++|.+|.+......
T Consensus 154 dg~~l~~~v~~P~~~~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vv~pd~~g~~~~~~~~~~ 233 (380)
T 3doh_A 154 TGVEIPYRLFVPKDVNPDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQCPPNSSWSTLFTD 233 (380)
T ss_dssp TCCEEEEEEECCSSCCTTSCEEEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHHHHTTSCCEEEEECCCTTCCSBTTTTC
T ss_pred CCcEEEEEEEcCCCCCCCCCccEEEEECCCCCCCCchhhhhhccccceeecCccccccCCEEEEEecCCCCCcccccccc
Confidence 5667777777433 278999999875422 111111 0110 012367899999999865432111
Q ss_pred -----CCCCCHHHHHHHHHHHHhcccCCc--eEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHH
Q 012188 230 -----DSLYTVREHLDMIEKSVIEPNKVK--SFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVM 302 (468)
Q Consensus 230 -----~~~~t~~~~~~di~~~l~~~l~~~--~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~ 302 (468)
.......+..+.+ ..++++++++ +++|+||||||.+++.++.++|+.+++++++++....
T Consensus 234 ~~~~~~~~~~~~d~~~~i-~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~sg~~~~------------ 300 (380)
T 3doh_A 234 RENPFNPEKPLLAVIKII-RKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGGGDV------------ 300 (380)
T ss_dssp SSCTTSBCHHHHHHHHHH-HHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCG------------
T ss_pred cccccCCcchHHHHHHHH-HHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceEEEEecCCCCh------------
Confidence 0133556666667 5777777764 7999999999999999999999999999999976411
Q ss_pred HhhcCCCCCchhhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhccc
Q 012188 303 RKVAPRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTA 382 (468)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (468)
T Consensus 301 -------------------------------------------------------------------------------- 300 (380)
T 3doh_A 301 -------------------------------------------------------------------------------- 300 (380)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccchHHHhhccC-CCcEEEEeeCCCCccChhhHHHHHHhCC----CCeEEEecCC--------CccccccCcHHHHH-
Q 012188 383 NKLDGYLDAVRNHV-KCDVNVFHGEDDELIPVECSYNVQRKIP----RARVKVIEKK--------DHITIVVGRQKTFA- 448 (468)
Q Consensus 383 ~~~~~~~~~~~~~i-~~PvLii~G~~D~~vp~~~~~~l~~~~p----~~~l~~i~~~--------gH~~~~~e~p~~~~- 448 (468)
. .+..+ .+|+++++|++|.++|++.++.+.+.++ +.++++++++ +|... ....
T Consensus 301 ----~----~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~h~~h~~~~H~~~-----~~~~~ 367 (380)
T 3doh_A 301 ----S----KVERIKDIPIWVFHAEDDPVVPVENSRVLVKKLAEIGGKVRYTEYEKGFMEKHGWDPHGSW-----IPTYE 367 (380)
T ss_dssp ----G----GGGGGTTSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEECTTHHHHTTCCTTCTH-----HHHHT
T ss_pred ----h----hhhhccCCCEEEEecCCCCccCHHHHHHHHHHHHHCCCceEEEEecCCcccCCCCCCchhH-----HHhcC
Confidence 0 00122 4899999999999999999888877663 4789999999 66532 2233
Q ss_pred -HHHHHHHhhc
Q 012188 449 -RELEEIWRSS 458 (468)
Q Consensus 449 -~~i~~fl~~~ 458 (468)
+.+.+||.+.
T Consensus 368 ~~~i~~wL~~~ 378 (380)
T 3doh_A 368 NQEAIEWLFEQ 378 (380)
T ss_dssp CHHHHHHHHTC
T ss_pred CHHHHHHHHhh
Confidence 3788898764
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=3.5e-16 Score=147.69 Aligned_cols=103 Identities=17% Similarity=0.142 Sum_probs=82.8
Q ss_pred CCCeEEEEecCCCCc-cchh-hhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceEEE
Q 012188 180 SSRDTLFVKTQGPSA-FWTE-TLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHI 257 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~-~~~~-~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i~l 257 (468)
.+++|||+||++++. ..|. .+.+.|. ++||+|+++|+||||.++.. .+.+++.+.+ +.+++..+.++++|
T Consensus 64 ~~~pVVLvHG~~~~~~~~w~~~l~~~L~---~~Gy~V~a~DlpG~G~~~~~----~~~~~la~~I-~~l~~~~g~~~v~L 135 (316)
T 3icv_A 64 VSKPILLVPGTGTTGPQSFDSNWIPLSA---QLGYTPCWISPPPFMLNDTQ----VNTEYMVNAI-TTLYAGSGNNKLPV 135 (316)
T ss_dssp CSSEEEEECCTTCCHHHHHTTTHHHHHH---HTTCEEEEECCTTTTCSCHH----HHHHHHHHHH-HHHHHHTTSCCEEE
T ss_pred CCCeEEEECCCCCCcHHHHHHHHHHHHH---HCCCeEEEecCCCCCCCcHH----HHHHHHHHHH-HHHHHHhCCCceEE
Confidence 467999999998876 3443 5778886 46999999999999976421 2345566666 57888889899999
Q ss_pred EEEcccHHHHHHHHHhC---CCccceEEEecCCCCC
Q 012188 258 VAHSLGCILALALAVKH---PGSVKSLTLLAPPYYP 290 (468)
Q Consensus 258 vGhS~Gg~ial~~a~~~---p~~v~~lVl~~p~~~~ 290 (468)
|||||||.++..++..+ +++|+++|+++++...
T Consensus 136 VGHSmGGlvA~~al~~~p~~~~~V~~lV~lapp~~G 171 (316)
T 3icv_A 136 LTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKG 171 (316)
T ss_dssp EEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTC
T ss_pred EEECHHHHHHHHHHHhccccchhhceEEEECCCCCC
Confidence 99999999998887776 5899999999988754
|
| >3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=3.4e-16 Score=154.55 Aligned_cols=105 Identities=10% Similarity=0.049 Sum_probs=73.3
Q ss_pred CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCC-----------C---------C--C-----
Q 012188 180 SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPT-----------D---------S--L----- 232 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~-----------~---------~--~----- 232 (468)
+.|+|||+||++++...+..+...|+ ++||.|+++|+||+|.|.... . . .
T Consensus 97 ~~P~Vv~~HG~~~~~~~~~~~a~~La---~~Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 173 (383)
T 3d59_A 97 KYPLVVFSHGLGAFRTLYSAIGIDLA---SHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYLRTLKQEEETHIRN 173 (383)
T ss_dssp CEEEEEEECCTTCCTTTTHHHHHHHH---HTTCEEEEECCCSSCSSEEEECSSHHHHHHTCCEEEECCCCCHHHHHHHHH
T ss_pred CCCEEEEcCCCCCCchHHHHHHHHHH---hCceEEEEeccCCCCccceeecCCccccccCCceeeeccccCcccchhhhH
Confidence 45789999999887766666777776 579999999999999874210 0 0 0
Q ss_pred CCHHHHHHHHH---HHH----------------------hcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCC
Q 012188 233 YTVREHLDMIE---KSV----------------------IEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPP 287 (468)
Q Consensus 233 ~t~~~~~~di~---~~l----------------------~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~ 287 (468)
..+...++|+. +.+ ...++.++++++||||||.+++.++.+.| +++++|++++.
T Consensus 174 ~~~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~-~v~a~v~~~~~ 252 (383)
T 3d59_A 174 EQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQ-RFRCGIALDAW 252 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCC
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHHhhCC-CccEEEEeCCc
Confidence 01111233331 122 12233468999999999999999988876 69999999875
Q ss_pred C
Q 012188 288 Y 288 (468)
Q Consensus 288 ~ 288 (468)
.
T Consensus 253 ~ 253 (383)
T 3d59_A 253 M 253 (383)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.66 E-value=1.1e-14 Score=155.34 Aligned_cols=213 Identities=15% Similarity=0.137 Sum_probs=117.5
Q ss_pred CCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccC--------------------CceEEEEEEcccHHHHH
Q 012188 209 KSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNK--------------------VKSFHIVAHSLGCILAL 268 (468)
Q Consensus 209 ~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~--------------------~~~i~lvGhS~Gg~ial 268 (468)
++||.|+++|+||+|.|++... .+.. +.++|+ .++++.+. .++++++||||||++++
T Consensus 279 ~~GYaVv~~D~RG~G~S~G~~~-~~~~-~e~~D~-~a~IdwL~~~~~~~~d~~~~~~v~q~~~~grVgl~G~SyGG~ial 355 (763)
T 1lns_A 279 TRGFASIYVAGVGTRSSDGFQT-SGDY-QQIYSM-TAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLGTMAY 355 (763)
T ss_dssp TTTCEEEEECCTTSTTSCSCCC-TTSH-HHHHHH-HHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHHHHHHH
T ss_pred HCCCEEEEECCCcCCCCCCcCC-CCCH-HHHHHH-HHHHHHHhhcccccccccccccccccCCCCcEEEEEECHHHHHHH
Confidence 5899999999999999987643 2332 344554 24443332 25899999999999999
Q ss_pred HHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhc---CCCCCchhhhhhhhHHHHH-HHhhHHHHHhhccchhHHH
Q 012188 269 ALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVA---PRRVWPLIAFGASMACWYE-HISRTICLLICKNHRVWEF 344 (468)
Q Consensus 269 ~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 344 (468)
.+|.++|+.++++|..++.... ... ..... ....++.. ....... ...+. . ..... ..
T Consensus 356 ~~Aa~~p~~lkaiV~~~~~~d~-------~~~-~~~~g~~~~~~g~~~~----~~~~l~~~~~~~~----~-~~g~~-~~ 417 (763)
T 1lns_A 356 GAATTGVEGLELILAEAGISSW-------YNY-YRENGLVRSPGGFPGE----DLDVLAALTYSRN----L-DGADF-LK 417 (763)
T ss_dssp HHHTTTCTTEEEEEEESCCSBH-------HHH-HBSSSSBCCCTTCTTC----CHHHHHHHHCGGG----G-SHHHH-HH
T ss_pred HHHHhCCcccEEEEEecccccH-------HHH-hhhcchhhhcccCCch----hhhHHhHHHHhhh----c-Ccchh-hh
Confidence 9999999999999999876421 111 10000 00001100 0000000 00000 0 00000 00
Q ss_pred HHHHHhhhHHHHHhhhccc-cc-cchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChhhHHHHHHh
Q 012188 345 LAKLVTRNRIRTFLLEGFF-CH-THNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRK 422 (468)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~ 422 (468)
....+. ..... +..... .. .....|. .......+.+|++|+|+++|.+|..+|+..+.++++.
T Consensus 418 ~~~~~~-~~~~~-~~~~~~~~~~~~~~~w~-------------~~s~~~~l~~I~~PvLii~G~~D~~vp~~~a~~l~~a 482 (763)
T 1lns_A 418 GNAEYE-KRLAE-MTAALDRKSGDYNQFWH-------------DRNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKA 482 (763)
T ss_dssp HHHHHH-HHHHH-HHHHHCTTTCCCCHHHH-------------TTBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHHHH
T ss_pred HHHHHH-HHHHH-HHhhhhhccCchhHHhh-------------ccChhhHhhcCCCCEEEEEECCCCCCChHHHHHHHHh
Confidence 000000 00000 000000 00 0001110 0111234578999999999999999999999999999
Q ss_pred CCC--CeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 423 IPR--ARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 423 ~p~--~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
+++ ....++.++||..+.+..+..+.+.+.+||++
T Consensus 483 l~~~~~~~l~i~~~gH~~~~~~~~~~~~~~i~~Ffd~ 519 (763)
T 1lns_A 483 LPEGHAKHAFLHRGAHIYMNSWQSIDFSETINAYFVA 519 (763)
T ss_dssp SCTTCCEEEEEESCSSCCCTTBSSCCHHHHHHHHHHH
T ss_pred hccCCCeEEEEeCCcccCccccchHHHHHHHHHHHHH
Confidence 975 34455677899976522455667777777764
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1.2e-15 Score=162.43 Aligned_cols=223 Identities=10% Similarity=0.033 Sum_probs=132.5
Q ss_pred CCCceeEEEe-------cCCCCeEEEEecCCCCcc---chhhhhhhccccCCCcceEEEECCCCCCCCCCC------C-C
Q 012188 168 DCDCKFCTCW-------SSSSRDTLFVKTQGPSAF---WTETLFPNFSSASKSTYRLFAIDLLGFGRSPKP------T-D 230 (468)
Q Consensus 168 d~~~~~~~~~-------~~~~p~vl~lHG~g~s~~---~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~------~-~ 230 (468)
||..+.+..+ .++.|+||++||+++... |.. ....|. ++||.|+++|+||+|..... . .
T Consensus 434 dg~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~-~~~~l~---~~G~~v~~~d~RG~g~~g~~~~~~~~~~~ 509 (693)
T 3iuj_A 434 DGTRVPLIISYRKGLKLDGSNPTILYGYGGFDVSLTPSFSV-SVANWL---DLGGVYAVANLRGGGEYGQAWHLAGTQQN 509 (693)
T ss_dssp TSCEEEEEEEEESSCCCSSCCCEEEECCCCTTCCCCCCCCH-HHHHHH---HTTCEEEEECCTTSSTTCHHHHHTTSGGG
T ss_pred CCcEEEEEEEecCCCCCCCCccEEEEECCCCCcCCCCccCH-HHHHHH---HCCCEEEEEeCCCCCccCHHHHHhhhhhc
Confidence 5655555444 234689999999765322 222 222332 48999999999998865311 0 0
Q ss_pred CCCCHHHHHHHHHHHHhcc--cCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCC
Q 012188 231 SLYTVREHLDMIEKSVIEP--NKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPR 308 (468)
Q Consensus 231 ~~~t~~~~~~di~~~l~~~--l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~ 308 (468)
....++|+++.+ +.++++ ...++++++|||+||++++.++.++|++++++|+..|........
T Consensus 510 ~~~~~~D~~~~~-~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p~~~~a~v~~~~~~d~~~~~-------------- 574 (693)
T 3iuj_A 510 KQNVFDDFIAAA-EYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPDLMRVALPAVGVLDMLRYH-------------- 574 (693)
T ss_dssp THHHHHHHHHHH-HHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCCTTTGG--------------
T ss_pred CCCcHHHHHHHH-HHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCccceeEEEecCCcchhhhhc--------------
Confidence 112456666666 466655 234699999999999999999999999999999999876431100
Q ss_pred CCCchhhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccch
Q 012188 309 RVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGY 388 (468)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (468)
....+ ..|...+. .+...+. . +..+.. ..
T Consensus 575 ----~~~~~---~~~~~~~g---------~p~~~~~---------~----------------~~~~~~----------~s 603 (693)
T 3iuj_A 575 ----TFTAG---TGWAYDYG---------TSADSEA---------M----------------FDYLKG----------YS 603 (693)
T ss_dssp ----GSGGG---GGCHHHHC---------CTTSCHH---------H----------------HHHHHH----------HC
T ss_pred ----cCCCc---hhHHHHcC---------CccCHHH---------H----------------HHHHHh----------cC
Confidence 00000 00000000 0000000 0 000000 00
Q ss_pred HHHhhcc-CCCc-EEEEeeCCCCccChhhHHHHHHhCC-------CCeEEEecCCCcccccc-CcHHHHHHHHHHHHhhc
Q 012188 389 LDAVRNH-VKCD-VNVFHGEDDELIPVECSYNVQRKIP-------RARVKVIEKKDHITIVV-GRQKTFARELEEIWRSS 458 (468)
Q Consensus 389 ~~~~~~~-i~~P-vLii~G~~D~~vp~~~~~~l~~~~p-------~~~l~~i~~~gH~~~~~-e~p~~~~~~i~~fl~~~ 458 (468)
....+.. +++| +|+++|++|..||+..+.++.+.++ .+++++++++||..... ++..+..+.+.+||.+.
T Consensus 604 p~~~~~~~~~~Pp~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 683 (693)
T 3iuj_A 604 PLHNVRPGVSYPSTMVTTADHDDRVVPAHSFKFAATLQADNAGPHPQLIRIETNAGHGAGTPVAKLIEQSADIYAFTLYE 683 (693)
T ss_dssp HHHHCCTTCCCCEEEEEEESSCSSSCTHHHHHHHHHHHHHCCSSSCEEEEEEC-------CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhcccCCCCceeEEecCCCCCCChhHHHHHHHHHHhhCCCCCCEEEEEeCCCCCCCcccHHHHHHHHHHHHHHHHHH
Confidence 0111244 6887 9999999999999999888877664 24789999999987642 45677888899999875
Q ss_pred CC
Q 012188 459 SG 460 (468)
Q Consensus 459 ~~ 460 (468)
-.
T Consensus 684 l~ 685 (693)
T 3iuj_A 684 MG 685 (693)
T ss_dssp TT
T ss_pred cC
Confidence 43
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.5e-15 Score=162.93 Aligned_cols=212 Identities=10% Similarity=0.019 Sum_probs=130.9
Q ss_pred CCCeEEEEecCCCCcc---chhhhhhhccccCCCcceEEEECCCCCCCCCCC----CC----CCCCHHHHHHHHHHHHhc
Q 012188 180 SSRDTLFVKTQGPSAF---WTETLFPNFSSASKSTYRLFAIDLLGFGRSPKP----TD----SLYTVREHLDMIEKSVIE 248 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~---~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~----~~----~~~t~~~~~~di~~~l~~ 248 (468)
+.|+||++||+++... |.. ....|. ++||.|+++|+||+|.+... .. ...+++|+++.+ +.+++
T Consensus 508 ~~P~vl~~HGg~~~~~~~~~~~-~~~~l~---~~G~~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~~D~~~~~-~~l~~ 582 (751)
T 2xe4_A 508 PQPCMLYGYGSYGLSMDPQFSI-QHLPYC---DRGMIFAIAHIRGGSELGRAWYEIGAKYLTKRNTFSDFIAAA-EFLVN 582 (751)
T ss_dssp CCCEEEECCCCTTCCCCCCCCG-GGHHHH---TTTCEEEEECCTTSCTTCTHHHHTTSSGGGTHHHHHHHHHHH-HHHHH
T ss_pred CccEEEEECCCCCcCCCCcchH-HHHHHH---hCCcEEEEEeeCCCCCcCcchhhccccccccCccHHHHHHHH-HHHHH
Confidence 4689999999876443 332 333443 48999999999999875321 11 124567777777 56666
Q ss_pred c--cCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHH
Q 012188 249 P--NKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEH 326 (468)
Q Consensus 249 ~--l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (468)
+ ...++++++|+|+||++++.++.++|++++++|+.+|.... .... .... .+ . ....|
T Consensus 583 ~~~~d~~ri~i~G~S~GG~la~~~a~~~p~~~~a~v~~~~~~d~-------~~~~---~~~~--~~-~----~~~~~--- 642 (751)
T 2xe4_A 583 AKLTTPSQLACEGRSAGGLLMGAVLNMRPDLFKVALAGVPFVDV-------MTTM---CDPS--IP-L----TTGEW--- 642 (751)
T ss_dssp TTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCH-------HHHH---TCTT--ST-T----HHHHT---
T ss_pred CCCCCcccEEEEEECHHHHHHHHHHHhCchheeEEEEeCCcchH-------Hhhh---cccC--cc-c----chhhH---
Confidence 5 34579999999999999999999999999999999886532 1100 0000 00 0 00000
Q ss_pred HhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCc-EEEEee
Q 012188 327 ISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCD-VNVFHG 405 (468)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-vLii~G 405 (468)
.. +. .+.. ...+..+.. . .....+.++++| +|+++|
T Consensus 643 -~~-----~g-~p~~--------------------------~~~~~~~~~---~-------sp~~~~~~~~~Pp~Lii~G 679 (751)
T 2xe4_A 643 -EE-----WG-NPNE--------------------------YKYYDYMLS---Y-------SPMDNVRAQEYPNIMVQCG 679 (751)
T ss_dssp -TT-----TC-CTTS--------------------------HHHHHHHHH---H-------CTGGGCCSSCCCEEEEEEE
T ss_pred -HH-----cC-CCCC--------------------------HHHHHHHHh---c-------ChhhhhccCCCCceeEEee
Confidence 00 00 0000 000000000 0 001112456887 999999
Q ss_pred CCCCccChhhHHHHHHhCCCC-------eEEEecCCCccccccCcHH--HHHHHHHHHHhhcCC
Q 012188 406 EDDELIPVECSYNVQRKIPRA-------RVKVIEKKDHITIVVGRQK--TFARELEEIWRSSSG 460 (468)
Q Consensus 406 ~~D~~vp~~~~~~l~~~~p~~-------~l~~i~~~gH~~~~~e~p~--~~~~~i~~fl~~~~~ 460 (468)
++|..||+..+.++.+.++.. .+.+++++||.... +.++ ...+.+.+||.+.-.
T Consensus 680 ~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~~~~~~Fl~~~l~ 742 (751)
T 2xe4_A 680 LHDPRVAYWEPAKWVSKLRECKTDNNEILLNIDMESGHFSAK-DRYKFWKESAIQQAFVCKHLK 742 (751)
T ss_dssp TTCSSSCTHHHHHHHHHHHHHCCSCCCEEEEEETTCCSSCCS-SHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCCCHHHHHHHHHHHHhcCCCCceEEEEECCCCCCCCcC-ChhHHHHHHHHHHHHHHHHhC
Confidence 999999999998888766422 34455999999874 4443 445678899987543
|
| >2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=1.3e-16 Score=158.42 Aligned_cols=106 Identities=18% Similarity=0.154 Sum_probs=84.6
Q ss_pred CCCCeEEEEecCCCCccchhhhhhhccccCCCcc---eEEEECCCCCCCC-----CCCC---------------------
Q 012188 179 SSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTY---RLFAIDLLGFGRS-----PKPT--------------------- 229 (468)
Q Consensus 179 ~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy---~Via~D~~G~G~S-----~~~~--------------------- 229 (468)
+++++|||+||++++...+..+.+.|. ++|| +|+++|++|||.| +...
T Consensus 20 ~~~ppVVLlHG~g~s~~~w~~la~~La---~~Gy~~~~Via~DlpG~G~S~~~~~Dv~~~G~~~~~G~n~~p~id~~~l~ 96 (484)
T 2zyr_A 20 EDFRPVVFVHGLAGSAGQFESQGMRFA---ANGYPAEYVKTFEYDTISWALVVETDMLFSGLGSEFGLNISQIIDPETLD 96 (484)
T ss_dssp -CCCCEEEECCTTCCGGGGHHHHHHHH---HTTCCGGGEEEECCCHHHHHHHTTTSTTTTTGGGHHHHHHGGGSCHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHH---HcCCCcceEEEEECCCCCcccccccccccccccccccccccccccccccc
Confidence 356899999999988776667888876 4789 8999999999976 1100
Q ss_pred ---------CCCCCHHHHHHHHHHHHhcccCCceEEEEEEcccHHHHHHHHHhCC---CccceEEEecCCC
Q 012188 230 ---------DSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHP---GSVKSLTLLAPPY 288 (468)
Q Consensus 230 ---------~~~~t~~~~~~di~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p---~~v~~lVl~~p~~ 288 (468)
...++.+++.+++ ..++++++.++++++||||||.+++.++.++| ++|+++|+++++.
T Consensus 97 ~v~~~~~~~~~~~~~~dla~~L-~~ll~~lg~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~ 166 (484)
T 2zyr_A 97 KILSKSRERLIDETFSRLDRVI-DEALAESGADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGVW 166 (484)
T ss_dssp HHHTSCHHHHHHHHHHHHHHHH-HHHHHHHCCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCCC
T ss_pred ccccccccCchhhhHHHHHHHH-HHHHHHhCCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCcc
Confidence 0113455666677 57888888899999999999999999999998 4899999999875
|
| >4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=6.5e-15 Score=138.76 Aligned_cols=177 Identities=14% Similarity=0.144 Sum_probs=115.9
Q ss_pred CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCC------CCCCCCCCCC--CCC-------CHHHHHHHHH-
Q 012188 180 SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLL------GFGRSPKPTD--SLY-------TVREHLDMIE- 243 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~------G~G~S~~~~~--~~~-------t~~~~~~di~- 243 (468)
..|.|||+||+|++...+..+.+.|...+ .++.+++++-| |.|.+-.+.. ... .+.+.++++.
T Consensus 65 ~~plVI~LHG~G~~~~~~~~~~~~l~~~~-~~~~~v~P~Ap~~~~~~~~G~~Wfd~~~~~~~~~~~~~~~~~~~~~~l~~ 143 (285)
T 4fhz_A 65 ATSLVVFLHGYGADGADLLGLAEPLAPHL-PGTAFVAPDAPEPCRANGFGFQWFPIPWLDGSSETAAAEGMAAAARDLDA 143 (285)
T ss_dssp CSEEEEEECCTTBCHHHHHTTHHHHGGGS-TTEEEEEECCSEECTTSSSCEESSCCHHHHCCCHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHHHhC-CCeEEEecCCCcccccCCCcccccccccccCcccchhhHHHHHHHHHHHH
Confidence 34679999999876654434555554221 47899998754 4444321100 000 1111222231
Q ss_pred --HHHhcccCC--ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhh
Q 012188 244 --KSVIEPNKV--KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGAS 319 (468)
Q Consensus 244 --~~l~~~l~~--~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (468)
..++.+.++ ++++++|+|+||.+++.++.++|+.+.++|.+++.... . ..
T Consensus 144 ~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~~---~----~~------------------- 197 (285)
T 4fhz_A 144 FLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLA---P----ER------------------- 197 (285)
T ss_dssp HHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCSC---H----HH-------------------
T ss_pred HHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCccC---c----hh-------------------
Confidence 233444454 68999999999999999999999999999998864321 0 00
Q ss_pred hHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCc
Q 012188 320 MACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCD 399 (468)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 399 (468)
... ....+.|
T Consensus 198 ---------------------------------------------------------------------~~~-~~~~~~P 207 (285)
T 4fhz_A 198 ---------------------------------------------------------------------LAE-EARSKPP 207 (285)
T ss_dssp ---------------------------------------------------------------------HHH-HCCCCCC
T ss_pred ---------------------------------------------------------------------hhh-hhhhcCc
Confidence 000 0233689
Q ss_pred EEEEeeCCCCccChhhHHHHHHhCC----CCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 400 VNVFHGEDDELIPVECSYNVQRKIP----RARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 400 vLii~G~~D~~vp~~~~~~l~~~~p----~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
++++||++|.+||.+.++++.+.+. ++++++++|.||.+. +++ .+.+.+||++.
T Consensus 208 vl~~hG~~D~~Vp~~~~~~~~~~L~~~g~~~~~~~y~g~gH~i~----~~~-l~~~~~fL~~~ 265 (285)
T 4fhz_A 208 VLLVHGDADPVVPFADMSLAGEALAEAGFTTYGHVMKGTGHGIA----PDG-LSVALAFLKER 265 (285)
T ss_dssp EEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEETTCCSSCC----HHH-HHHHHHHHHHH
T ss_pred ccceeeCCCCCcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC----HHH-HHHHHHHHHHH
Confidence 9999999999999999887776553 568999999999854 333 45677888774
|
| >4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=99.64 E-value=4.7e-15 Score=139.70 Aligned_cols=105 Identities=16% Similarity=0.063 Sum_probs=69.3
Q ss_pred CCeEEEEecCCCCccchh---hhhhhccccCCCcceEEEECCCCCC--------------CCCCCCC------CCCC-HH
Q 012188 181 SRDTLFVKTQGPSAFWTE---TLFPNFSSASKSTYRLFAIDLLGFG--------------RSPKPTD------SLYT-VR 236 (468)
Q Consensus 181 ~p~vl~lHG~g~s~~~~~---~~~~~L~~~~~~gy~Via~D~~G~G--------------~S~~~~~------~~~t-~~ 236 (468)
.|+||++||++++...+. .+...+. +.||.|+++|.+++| .+..... ..+. ..
T Consensus 51 ~p~vv~lHG~~~~~~~~~~~~~~~~~~~---~~g~~vv~~d~~~rg~~~~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~ 127 (283)
T 4b6g_A 51 LGVIYWLSGLTCTEQNFITKSGFQRYAA---EHQVIVVAPDTSPRGEQVPNDDAYDLGQSAGFYLNATEQPWAANYQMYD 127 (283)
T ss_dssp EEEEEEECCTTCCSHHHHHHSCTHHHHH---HHTCEEEEECSSCCSTTSCCCSSTTSBTTBCTTSBCCSTTGGGTCBHHH
T ss_pred CCEEEEEcCCCCCccchhhcccHHHHHh---hCCeEEEEeccccccccccccccccccCCCcccccCccCcccchhhHHH
Confidence 478999999887554221 1223332 368999999987443 3311000 1112 23
Q ss_pred HHHHHHHHHHhcc-cC-CceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCC
Q 012188 237 EHLDMIEKSVIEP-NK-VKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYY 289 (468)
Q Consensus 237 ~~~~di~~~l~~~-l~-~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~ 289 (468)
..++++. .+++. +. .++++|+||||||.+|+.++.++|++++++++++|...
T Consensus 128 ~~~~~~~-~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~ 181 (283)
T 4b6g_A 128 YILNELP-RLIEKHFPTNGKRSIMGHSMGGHGALVLALRNQERYQSVSAFSPILS 181 (283)
T ss_dssp HHHTHHH-HHHHHHSCEEEEEEEEEETHHHHHHHHHHHHHGGGCSCEEEESCCCC
T ss_pred HHHHHHH-HHHHHhCCCCCCeEEEEEChhHHHHHHHHHhCCccceeEEEECCccc
Confidence 3345553 43333 33 36899999999999999999999999999999998664
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=99.63 E-value=4.1e-15 Score=156.68 Aligned_cols=222 Identities=8% Similarity=-0.046 Sum_probs=136.2
Q ss_pred CCCCceeEEEe-------cCCCCeEEEEecCCCCcc---chhhhhhhccccCCCcceEEEECCCCCCCCCC------CCC
Q 012188 167 SDCDCKFCTCW-------SSSSRDTLFVKTQGPSAF---WTETLFPNFSSASKSTYRLFAIDLLGFGRSPK------PTD 230 (468)
Q Consensus 167 ~d~~~~~~~~~-------~~~~p~vl~lHG~g~s~~---~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~------~~~ 230 (468)
.||..+.+..+ .++.|+||++||+++... |.......+. ++||.|+.+|+||+|.+.. ...
T Consensus 457 ~DG~~i~~~l~~P~~~~~~~~~P~vl~~HGG~~~~~~~~~~~~~~q~la---~~Gy~Vv~~d~RGsg~~G~~~~~~~~~~ 533 (711)
T 4hvt_A 457 FDGVKIPYFLVYKKGIKFDGKNPTLLEAYGGFQVINAPYFSRIKNEVWV---KNAGVSVLANIRGGGEFGPEWHKSAQGI 533 (711)
T ss_dssp TTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHTG---GGTCEEEEECCTTSSTTCHHHHHTTSGG
T ss_pred CCCeEEEEEEEecCCCCCCCCccEEEEECCCCCCCCCCcccHHHHHHHH---HCCCEEEEEeCCCCCCcchhHHHhhhhc
Confidence 36666655444 134689999999865332 2222221332 4899999999999887631 111
Q ss_pred -CCCCHHHHHHHHHHHHhccc--CCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcC
Q 012188 231 -SLYTVREHLDMIEKSVIEPN--KVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAP 307 (468)
Q Consensus 231 -~~~t~~~~~~di~~~l~~~l--~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~ 307 (468)
....++|+.+.+ +.++++- ..++++++|+|+||++++.++.++|++++++|+..|........
T Consensus 534 ~~~~~~~D~~aav-~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd~f~a~V~~~pv~D~~~~~------------- 599 (711)
T 4hvt_A 534 KRQTAFNDFFAVS-EELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPELFGAVACEVPILDMIRYK------------- 599 (711)
T ss_dssp GTHHHHHHHHHHH-HHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGG-------------
T ss_pred cCcCcHHHHHHHH-HHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcCceEEEEEeCCccchhhhh-------------
Confidence 223455666666 4665542 23689999999999999999999999999999999876531100
Q ss_pred CCCCchhhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccc
Q 012188 308 RRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDG 387 (468)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (468)
... ....|...+ ..+...+. ... +.. .
T Consensus 600 -----~~~---~~~~~~~~~---------G~p~~~~~----------~~~----------------l~~----------~ 626 (711)
T 4hvt_A 600 -----EFG---AGHSWVTEY---------GDPEIPND----------LLH----------------IKK----------Y 626 (711)
T ss_dssp -----GST---TGGGGHHHH---------CCTTSHHH----------HHH----------------HHH----------H
T ss_pred -----ccc---cchHHHHHh---------CCCcCHHH----------HHH----------------HHH----------c
Confidence 000 000010000 00000000 000 000 0
Q ss_pred hHHHhhccCCC--cEEEEeeCCCCccChhhHHHHHHhC-C----CCeEEEecCCCccccc-cCcHHHHHHHHHHHHhhc
Q 012188 388 YLDAVRNHVKC--DVNVFHGEDDELIPVECSYNVQRKI-P----RARVKVIEKKDHITIV-VGRQKTFARELEEIWRSS 458 (468)
Q Consensus 388 ~~~~~~~~i~~--PvLii~G~~D~~vp~~~~~~l~~~~-p----~~~l~~i~~~gH~~~~-~e~p~~~~~~i~~fl~~~ 458 (468)
.....+.++++ |+|++||++|..||+..+.++.+.+ . .+++++++++||.... .++.....+.+.+||.+.
T Consensus 627 SP~~~v~~i~~~pPvLii~G~~D~~Vp~~~s~~~~~aL~~~~g~pv~l~~~p~~gHg~~~~~~~~~~~~~~i~~FL~~~ 705 (711)
T 4hvt_A 627 APLENLSLTQKYPTVLITDSVLDQRVHPWHGRIFEYVLAQNPNTKTYFLESKDSGHGSGSDLKESANYFINLYTFFANA 705 (711)
T ss_dssp CGGGSCCTTSCCCEEEEEEETTCCSSCTHHHHHHHHHHTTCTTCCEEEEEESSCCSSSCSSHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHhhcCCCCCEEEEecCCCCcCChHHHHHHHHHHHHHcCCCEEEEEECCCCCcCcCCcchHHHHHHHHHHHHHHH
Confidence 00011245566 9999999999999999999888877 3 4689999999998653 123445666778898764
|
| >2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.63 E-value=7.6e-15 Score=136.34 Aligned_cols=106 Identities=7% Similarity=-0.078 Sum_probs=77.5
Q ss_pred CCCeEEEEecCCCCccchhh--hhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcc----c--C
Q 012188 180 SSRDTLFVKTQGPSAFWTET--LFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEP----N--K 251 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~~~--~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~----l--~ 251 (468)
+.|+||++||++++...+.. .+..+. .+.||.|+.+|++++|.++.+.. ....+.+++++ ..+++. . +
T Consensus 40 ~~p~vv~~HG~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~i~~~~~~~~~~ 115 (263)
T 2uz0_A 40 DIPVLYLLHGMSGNHNSWLKRTNVERLL--RGTNLIVVMPNTSNGWYTDTQYG-FDYYTALAEEL-PQVLKRFFPNMTSK 115 (263)
T ss_dssp CBCEEEEECCTTCCTTHHHHHSCHHHHT--TTCCCEEEECCCTTSTTSBCTTS-CBHHHHHHTHH-HHHHHHHCTTBCCC
T ss_pred CCCEEEEECCCCCCHHHHHhccCHHHHH--hcCCeEEEEECCCCCccccCCCc-ccHHHHHHHHH-HHHHHHHhccccCC
Confidence 45889999998876654433 233333 13689999999999888765432 22355666676 344443 2 2
Q ss_pred CceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCC
Q 012188 252 VKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 252 ~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~ 290 (468)
.++++++|||+||.+++.++. +|++++++|+++|....
T Consensus 116 ~~~i~l~G~S~Gg~~a~~~a~-~~~~~~~~v~~~~~~~~ 153 (263)
T 2uz0_A 116 REKTFIAGLSMGGYGCFKLAL-TTNRFSHAASFSGALSF 153 (263)
T ss_dssp GGGEEEEEETHHHHHHHHHHH-HHCCCSEEEEESCCCCS
T ss_pred CCceEEEEEChHHHHHHHHHh-CccccceEEEecCCcch
Confidence 368999999999999999999 99999999999987654
|
| >4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.60 E-value=3.3e-14 Score=131.07 Aligned_cols=179 Identities=11% Similarity=0.135 Sum_probs=114.7
Q ss_pred CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCC--------------CCCCCCCCC------CCCCHHHHH
Q 012188 180 SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLG--------------FGRSPKPTD------SLYTVREHL 239 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G--------------~G~S~~~~~------~~~t~~~~~ 239 (468)
.+++|||+||+|++..-+..+.+.+...+ .++++++|+-|- +........ ....+.+.+
T Consensus 36 ~~~~VI~LHG~G~~~~dl~~l~~~l~~~~-~~~~~i~P~Ap~~~~~~~~~~~~~~Wf~~~~~~~~~~~~~~d~~~i~~~~ 114 (246)
T 4f21_A 36 ARFCVIWLHGLGADGHDFVDIVNYFDVSL-DEIRFIFPHADIIPVTINMGMQMRAWYDIKSLDANSLNRVVDVEGINSSI 114 (246)
T ss_dssp CCEEEEEEEC--CCCCCGGGGGGGCCSCC-TTEEEEEECGGGSCTTTHHHHHHHSCTTCCCC---CGGGGSCCC-CHHHH
T ss_pred CCeEEEEEcCCCCCHHHHHHHHHHhhhcC-CCeEEEeCCCCccccccCCCCCcccccccccccccchhhhhhHHHHHHHH
Confidence 35689999999887654445666664222 478899987532 111111000 112233444
Q ss_pred HHHHHHHhc---c--cCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchh
Q 012188 240 DMIEKSVIE---P--NKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLI 314 (468)
Q Consensus 240 ~di~~~l~~---~--l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (468)
+.+ ..+++ . +..++++++|+|+||++++.++.++|+.+.+++.+++.... . ...
T Consensus 115 ~~i-~~li~~~~~~gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~~sG~lp~---~----~~~------------- 173 (246)
T 4f21_A 115 AKV-NKLIDSQVNQGIASENIILAGFSQGGIIATYTAITSQRKLGGIMALSTYLPA---W----DNF------------- 173 (246)
T ss_dssp HHH-HHHHHHHHHC-CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEEESCCCTT---H----HHH-------------
T ss_pred HHH-HHHHHHHHHcCCChhcEEEEEeCchHHHHHHHHHhCccccccceehhhccCc---c----ccc-------------
Confidence 444 23332 2 34468999999999999999999999999999999875422 0 000
Q ss_pred hhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhc
Q 012188 315 AFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRN 394 (468)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (468)
.. ... ..
T Consensus 174 --------------------------------------------~~-----------------------~~~------~~ 180 (246)
T 4f21_A 174 --------------------------------------------KG-----------------------KIT------SI 180 (246)
T ss_dssp --------------------------------------------ST-----------------------TCC------GG
T ss_pred --------------------------------------------cc-----------------------ccc------cc
Confidence 00 000 01
Q ss_pred cCCCcEEEEeeCCCCccChhhHHHHHHhCC----CCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 395 HVKCDVNVFHGEDDELIPVECSYNVQRKIP----RARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 395 ~i~~PvLii~G~~D~~vp~~~~~~l~~~~p----~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
..++|++++||++|++||.+.++++.+.+. ++++.+++|.||.+. +++ .+.+.+||++.
T Consensus 181 ~~~~Pvl~~HG~~D~vVp~~~~~~~~~~L~~~g~~v~~~~y~g~gH~i~----~~~-l~~~~~fL~k~ 243 (246)
T 4f21_A 181 NKGLPILVCHGTDDQVLPEVLGHDLSDKLKVSGFANEYKHYVGMQHSVC----MEE-IKDISNFIAKT 243 (246)
T ss_dssp GTTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEESSCCSSCC----HHH-HHHHHHHHHHH
T ss_pred ccCCchhhcccCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCccC----HHH-HHHHHHHHHHH
Confidence 226899999999999999999888877663 458899999999754 333 45678888764
|
| >1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A | Back alignment and structure |
|---|
Probab=99.58 E-value=1.7e-16 Score=158.50 Aligned_cols=107 Identities=17% Similarity=0.211 Sum_probs=82.2
Q ss_pred cCCCCeEEEEecCCCCc--cchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhccc----C
Q 012188 178 SSSSRDTLFVKTQGPSA--FWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPN----K 251 (468)
Q Consensus 178 ~~~~p~vl~lHG~g~s~--~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l----~ 251 (468)
++++|+||++||++++. .|...+.+.|.+ ..+|+|+++|+||+|.|..+. ...+.+++++++ ..+++.+ +
T Consensus 67 ~~~~~~vvllHG~~~s~~~~w~~~~~~~l~~--~~~~~Vi~~D~~g~g~s~~~~-~~~~~~~~~~dl-~~~i~~l~~~~g 142 (432)
T 1gpl_A 67 NLNRKTRFIIHGFTDSGENSWLSDMCKNMFQ--VEKVNCICVDWKGGSKAQYSQ-ASQNIRVVGAEV-AYLVQVLSTSLN 142 (432)
T ss_dssp CTTSEEEEEECCTTCCTTSHHHHHHHHHHHH--HCCEEEEEEECHHHHTSCHHH-HHHHHHHHHHHH-HHHHHHHHHHHC
T ss_pred CCCCCeEEEECCCCCCCCchHHHHHHHHHHh--cCCcEEEEEECccccCccchh-hHhhHHHHHHHH-HHHHHHHHHhcC
Confidence 45678999999998876 355436666651 159999999999999986322 223456666666 4555544 4
Q ss_pred --CceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCC
Q 012188 252 --VKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPY 288 (468)
Q Consensus 252 --~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~ 288 (468)
.++++++||||||.+|+.+|.++|++++++++++|..
T Consensus 143 ~~~~~i~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~ 181 (432)
T 1gpl_A 143 YAPENVHIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAE 181 (432)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHTTTTCSSEEEEESCBC
T ss_pred CCcccEEEEEeCHHHHHHHHHHHhcccccceeEEecccc
Confidence 6799999999999999999999999999999999764
|
| >1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=5.1e-14 Score=131.56 Aligned_cols=108 Identities=10% Similarity=0.067 Sum_probs=70.6
Q ss_pred CCCeEEEEecCCCCcc-chhh------hhhhcccc-CCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccC
Q 012188 180 SSRDTLFVKTQGPSAF-WTET------LFPNFSSA-SKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNK 251 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~-~~~~------~~~~L~~~-~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~ 251 (468)
+.|+||++||++++.. |... +...|... ...+|.|+++|.+++|.+.... .....++.++++...+.+.++
T Consensus 61 ~~P~vv~lHG~g~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~vv~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~ 139 (268)
T 1jjf_A 61 KYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAAGPGIADG-YENFTKDLLNSLIPYIESNYS 139 (268)
T ss_dssp CBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCCCCTTCSCH-HHHHHHHHHHTHHHHHHHHSC
T ss_pred CccEEEEECCCCCCcchhhhccccHHHHHHHHHHcCCCCCEEEEEeCCCCCCcccccc-HHHHHHHHHHHHHHHHHhhcC
Confidence 3578999999887543 3321 23444310 0136999999999987642110 000112224444233334444
Q ss_pred C----ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCC
Q 012188 252 V----KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPY 288 (468)
Q Consensus 252 ~----~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~ 288 (468)
. ++++++||||||.+++.++.++|+.++++++++|..
T Consensus 140 ~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~ 180 (268)
T 1jjf_A 140 VYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAP 180 (268)
T ss_dssp BCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCT
T ss_pred CCCCCCceEEEEECHHHHHHHHHHHhCchhhhheEEeCCCC
Confidence 3 689999999999999999999999999999999864
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E | Back alignment and structure |
|---|
Probab=99.55 E-value=8.9e-15 Score=140.10 Aligned_cols=105 Identities=17% Similarity=0.254 Sum_probs=89.8
Q ss_pred cCCCCeEEEEecCCCCc------cchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccC
Q 012188 178 SSSSRDTLFVKTQGPSA------FWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNK 251 (468)
Q Consensus 178 ~~~~p~vl~lHG~g~s~------~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~ 251 (468)
.+++++|||+||++++. ..|..+.+.|. ++||+|+++|+||+|.|+.+. .+.+++++++ ..+++.++
T Consensus 5 ~~~~~~vVlvHG~~~~~~~~~~~~~w~~l~~~L~---~~G~~V~~~d~~g~g~s~~~~---~~~~~l~~~i-~~~l~~~~ 77 (320)
T 1ys1_X 5 AATRYPIILVHGLTGTDKYAGVLEYWYGIQEDLQ---QRGATVYVANLSGFQSDDGPN---GRGEQLLAYV-KTVLAATG 77 (320)
T ss_dssp TCCSSCEEEECCTTCCSEETTTEESSTTHHHHHH---HTTCCEEECCCCSSCCSSSTT---SHHHHHHHHH-HHHHHHHC
T ss_pred CCCCCEEEEECCCCCCccccchHHHHHHHHHHHH---hCCCEEEEEcCCCCCCCCCCC---CCHHHHHHHH-HHHHHHhC
Confidence 45678999999988765 44445777776 479999999999999996543 5788999999 68899999
Q ss_pred CceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCC
Q 012188 252 VKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYY 289 (468)
Q Consensus 252 ~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~ 289 (468)
.++++++||||||.+++.++.++|++|+++|+++++..
T Consensus 78 ~~~v~lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p~~ 115 (320)
T 1ys1_X 78 ATKVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTPHR 115 (320)
T ss_dssp CSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTT
T ss_pred CCCEEEEEECHhHHHHHHHHHhChhhceEEEEECCCCC
Confidence 89999999999999999999999999999999998643
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 | Back alignment and structure |
|---|
Probab=99.54 E-value=1.7e-14 Score=119.54 Aligned_cols=94 Identities=17% Similarity=0.227 Sum_probs=76.2
Q ss_pred CCCceeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHh
Q 012188 168 DCDCKFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVI 247 (468)
Q Consensus 168 d~~~~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~ 247 (468)
++..++|..++ ++|+|||+| +....|.. + |+ ++|+|+++|+||||.|+.+... ++++++++ ..++
T Consensus 10 ~g~~~~~~~~g-~~~~vv~~H--~~~~~~~~-~---l~----~~~~v~~~d~~G~G~s~~~~~~---~~~~~~~~-~~~~ 74 (131)
T 2dst_A 10 YGLNLVFDRVG-KGPPVLLVA--EEASRWPE-A---LP----EGYAFYLLDLPGYGRTEGPRMA---PEELAHFV-AGFA 74 (131)
T ss_dssp TTEEEEEEEEC-CSSEEEEES--SSGGGCCS-C---CC----TTSEEEEECCTTSTTCCCCCCC---HHHHHHHH-HHHH
T ss_pred CCEEEEEEEcC-CCCeEEEEc--CCHHHHHH-H---Hh----CCcEEEEECCCCCCCCCCCCCC---HHHHHHHH-HHHH
Confidence 34456666655 478999999 44444543 2 44 6799999999999999876542 89999999 6899
Q ss_pred cccCCceEEEEEEcccHHHHHHHHHhCCC
Q 012188 248 EPNKVKSFHIVAHSLGCILALALAVKHPG 276 (468)
Q Consensus 248 ~~l~~~~i~lvGhS~Gg~ial~~a~~~p~ 276 (468)
+.++.++++++||||||.+++.+|.++|.
T Consensus 75 ~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 75 VMMNLGAPWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp HHTTCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred HHcCCCccEEEEEChHHHHHHHHHhcCCc
Confidence 99999999999999999999999999985
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.51 E-value=6.9e-13 Score=138.64 Aligned_cols=120 Identities=12% Similarity=-0.027 Sum_probs=82.7
Q ss_pred CCCCceeEEEecC----CCCeEEEEecCCCCc--------cchhhhh---hhccccCCCcceEEEECCCCCCCCCCCCCC
Q 012188 167 SDCDCKFCTCWSS----SSRDTLFVKTQGPSA--------FWTETLF---PNFSSASKSTYRLFAIDLLGFGRSPKPTDS 231 (468)
Q Consensus 167 ~d~~~~~~~~~~~----~~p~vl~lHG~g~s~--------~~~~~~~---~~L~~~~~~gy~Via~D~~G~G~S~~~~~~ 231 (468)
.||..+....|.+ ..|.||++||++... .|...+. ..|+ ++||.|+++|+||+|.|.+....
T Consensus 33 ~DG~~L~~~~~~P~~~~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la---~~Gy~Vv~~D~RG~g~S~g~~~~ 109 (615)
T 1mpx_A 33 RDGVKLHTVIVLPKGAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFV---EGGYIRVFQDVRGKYGSEGDYVM 109 (615)
T ss_dssp TTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHH---HTTCEEEEEECTTSTTCCSCCCT
T ss_pred CCCCEEEEEEEeCCCCCCeeEEEEEcCCCCccccccccccccccccchhHHHHH---hCCeEEEEECCCCCCCCCCcccc
Confidence 4676777766633 236788899987642 1211122 3343 58999999999999999765432
Q ss_pred C------------CCHHHHHHHHHHHHhcccC--CceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCC
Q 012188 232 L------------YTVREHLDMIEKSVIEPNK--VKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 232 ~------------~t~~~~~~di~~~l~~~l~--~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~ 290 (468)
. ...+|..+.+ +.+.++.+ ..++.++||||||++++.+|..+|++++++|.++++...
T Consensus 110 ~~~~~~~~~~~g~~~~~D~~~~i-~~l~~~~~~~~~rv~l~G~S~GG~~al~~a~~~~~~l~a~v~~~~~~d~ 181 (615)
T 1mpx_A 110 TRPLRGPLNPSEVDHATDAWDTI-DWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMIDG 181 (615)
T ss_dssp TCCCSBTTBCSSCCHHHHHHHHH-HHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESCCCCT
T ss_pred ccccccccccccccHHHHHHHHH-HHHHhcCCCCCCeEEEEecCHHHHHHHHHhhcCCCceEEEEecCCcccc
Confidence 1 2233444444 34444312 248999999999999999999999999999999988763
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 | Back alignment and structure |
|---|
Probab=99.50 E-value=2.1e-14 Score=135.57 Aligned_cols=101 Identities=10% Similarity=0.120 Sum_probs=85.9
Q ss_pred cCCCCeEEEEecCCCCcc-----chhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCC
Q 012188 178 SSSSRDTLFVKTQGPSAF-----WTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKV 252 (468)
Q Consensus 178 ~~~~p~vl~lHG~g~s~~-----~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~ 252 (468)
.+++|+|||+||++++.. .+..+.+.|. ++||+|+++|+||+|.|+ .+.+++++++ ..+++.++.
T Consensus 4 ~~~~~~vvlvHG~~~~~~~~~~~~~~~~~~~L~---~~G~~v~~~d~~g~g~s~------~~~~~~~~~i-~~~~~~~~~ 73 (285)
T 1ex9_A 4 TQTKYPIVLAHGMLGFDNILGVDYWFGIPSALR---RDGAQVYVTEVSQLDTSE------VRGEQLLQQV-EEIVALSGQ 73 (285)
T ss_dssp TCCSSCEEEECCTTCCSEETTEESSTTHHHHHH---HTTCCEEEECCCSSSCHH------HHHHHHHHHH-HHHHHHHCC
T ss_pred CCCCCeEEEeCCCCCCccccccccHHHHHHHHH---hCCCEEEEEeCCCCCCch------hhHHHHHHHH-HHHHHHhCC
Confidence 456789999999877532 3345777776 478999999999999884 4678889999 688888888
Q ss_pred ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCC
Q 012188 253 KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPY 288 (468)
Q Consensus 253 ~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~ 288 (468)
++++++||||||.+++.++.++|++|+++|+++++.
T Consensus 74 ~~v~lvGhS~GG~~a~~~a~~~p~~v~~lv~i~~p~ 109 (285)
T 1ex9_A 74 PKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPH 109 (285)
T ss_dssp SCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred CCEEEEEECHhHHHHHHHHHhChhheeEEEEECCCC
Confidence 899999999999999999999999999999999864
|
| >1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=8.1e-15 Score=146.86 Aligned_cols=107 Identities=16% Similarity=0.168 Sum_probs=84.2
Q ss_pred cCCCCeEEEEecCCCCc--cchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhccc----C
Q 012188 178 SSSSRDTLFVKTQGPSA--FWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPN----K 251 (468)
Q Consensus 178 ~~~~p~vl~lHG~g~s~--~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l----~ 251 (468)
++++|+||++||++++. .|...+.+.|.+ ..+|+|+++|+||||.|..+. ...+..++++++ ..+++.+ +
T Consensus 67 ~~~~p~vvliHG~~~~~~~~w~~~l~~~l~~--~~~~~Vi~~D~~G~G~S~~~~-~~~~~~~~~~dl-~~li~~L~~~~g 142 (452)
T 1bu8_A 67 QLDRKTRFIVHGFIDKGEDGWLLDMCKKMFQ--VEKVNCICVDWRRGSRTEYTQ-ASYNTRVVGAEI-AFLVQVLSTEMG 142 (452)
T ss_dssp CTTSEEEEEECCSCCTTCTTHHHHHHHHHHT--TCCEEEEEEECHHHHSSCHHH-HHHHHHHHHHHH-HHHHHHHHHHHC
T ss_pred CCCCCeEEEECCCCCCCCchHHHHHHHHHHh--hCCCEEEEEechhcccCchhH-hHhhHHHHHHHH-HHHHHHHHHhcC
Confidence 45678999999998866 355445566651 249999999999999996322 224566777777 5666665 5
Q ss_pred C--ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCC
Q 012188 252 V--KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPY 288 (468)
Q Consensus 252 ~--~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~ 288 (468)
. ++++|+||||||.+|+.+|.++|++|+++|+++|..
T Consensus 143 ~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1bu8_A 143 YSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAE 181 (452)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred CCccceEEEEEChhHHHHHHHHHhcccccceEEEecCCc
Confidence 4 799999999999999999999999999999999764
|
| >1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus} | Back alignment and structure |
|---|
Probab=99.49 E-value=8.5e-15 Score=146.70 Aligned_cols=107 Identities=18% Similarity=0.204 Sum_probs=84.1
Q ss_pred cCCCCeEEEEecCCCCc--cchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhccc----C
Q 012188 178 SSSSRDTLFVKTQGPSA--FWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPN----K 251 (468)
Q Consensus 178 ~~~~p~vl~lHG~g~s~--~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l----~ 251 (468)
++++|++|++||++++. .|...+.+.|.+ ..+|+|+++|++|||.|+.+. ...+++++++++ ..+++.+ +
T Consensus 67 ~~~~p~vvliHG~~~~~~~~w~~~~~~~l~~--~~~~~Vi~~D~~g~G~S~~~~-~~~~~~~~~~dl-~~~i~~L~~~~g 142 (452)
T 1w52_X 67 QSSRKTHFVIHGFRDRGEDSWPSDMCKKILQ--VETTNCISVDWSSGAKAEYTQ-AVQNIRIVGAET-AYLIQQLLTELS 142 (452)
T ss_dssp CTTSCEEEEECCTTCCSSSSHHHHHHHHHHT--TSCCEEEEEECHHHHTSCHHH-HHHHHHHHHHHH-HHHHHHHHHHHC
T ss_pred CCCCCEEEEEcCCCCCCCchHHHHHHHHHHh--hCCCEEEEEecccccccccHH-HHHhHHHHHHHH-HHHHHHHHHhcC
Confidence 55678999999998866 355446666651 139999999999999996332 224556677777 4666655 5
Q ss_pred --CceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCC
Q 012188 252 --VKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPY 288 (468)
Q Consensus 252 --~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~ 288 (468)
.++++|+||||||.+|+.+|.++|++|+++|+++|..
T Consensus 143 ~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1w52_X 143 YNPENVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPAE 181 (452)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred CCcccEEEEEeCHHHHHHHHHHHhcccceeeEEeccccc
Confidence 6899999999999999999999999999999999764
|
| >1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19 | Back alignment and structure |
|---|
Probab=99.48 E-value=1e-14 Score=145.38 Aligned_cols=107 Identities=18% Similarity=0.204 Sum_probs=81.8
Q ss_pred cCCCCeEEEEecCCCCc--cchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhccc-----
Q 012188 178 SSSSRDTLFVKTQGPSA--FWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPN----- 250 (468)
Q Consensus 178 ~~~~p~vl~lHG~g~s~--~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l----- 250 (468)
++++|++|++||++++. .|...+.+.|. .+.+|+|+++|++|||.|..+. ..++.+.+++++ ..+++.+
T Consensus 66 ~~~~p~vvliHG~~~s~~~~w~~~l~~~ll--~~~~~~VI~vD~~g~g~s~y~~-~~~~~~~v~~~l-a~ll~~L~~~~g 141 (449)
T 1hpl_A 66 NTGRKTRFIIHGFIDKGEESWLSTMCQNMF--KVESVNCICVDWKSGSRTAYSQ-ASQNVRIVGAEV-AYLVGVLQSSFD 141 (449)
T ss_dssp CTTSEEEEEECCCCCTTCTTHHHHHHHHHH--HHCCEEEEEEECHHHHSSCHHH-HHHHHHHHHHHH-HHHHHHHHHHHC
T ss_pred CCCCCeEEEEecCCCCCCccHHHHHHHHHH--hcCCeEEEEEeCCcccCCccHH-HHHHHHHHHHHH-HHHHHHHHHhcC
Confidence 55678999999998874 46554666652 0268999999999999985322 123455566666 4555443
Q ss_pred -CCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCC
Q 012188 251 -KVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPY 288 (468)
Q Consensus 251 -~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~ 288 (468)
+.++++|+||||||.+|..+|.++|++|+++++++|..
T Consensus 142 ~~~~~v~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa~ 180 (449)
T 1hpl_A 142 YSPSNVHIIGHSLGSHAAGEAGRRTNGAVGRITGLDPAE 180 (449)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred CCcccEEEEEECHhHHHHHHHHHhcchhcceeeccCccc
Confidence 46899999999999999999999999999999999764
|
| >1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=1.1e-12 Score=123.43 Aligned_cols=108 Identities=15% Similarity=0.050 Sum_probs=73.8
Q ss_pred CCeEEEEecCCC--Cc-cchhhhhhhccccCCCcceEEEECCCCC-CCCCC--CCC-----CCCCHHHH-HHHHHHHHhc
Q 012188 181 SRDTLFVKTQGP--SA-FWTETLFPNFSSASKSTYRLFAIDLLGF-GRSPK--PTD-----SLYTVREH-LDMIEKSVIE 248 (468)
Q Consensus 181 ~p~vl~lHG~g~--s~-~~~~~~~~~L~~~~~~gy~Via~D~~G~-G~S~~--~~~-----~~~t~~~~-~~di~~~l~~ 248 (468)
+++|+++||+++ +. .|.. ..+....+.+.+|.|+++|.+|. +.++. +.. ..+++.++ ++++ ..+++
T Consensus 29 ~~~v~llHG~~~~~~~~~w~~-~~~~~~~l~~~~~~vv~pd~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l-~~~i~ 106 (280)
T 1dqz_A 29 PHAVYLLDGLRAQDDYNGWDI-NTPAFEEYYQSGLSVIMPVGGQSSFYTDWYQPSQSNGQNYTYKWETFLTREM-PAWLQ 106 (280)
T ss_dssp SSEEEECCCTTCCSSSCHHHH-HSCHHHHHTTSSSEEEEECCCTTCTTSBCSSSCTTTTCCSCCBHHHHHHTHH-HHHHH
T ss_pred CCEEEEECCCCCCCCcccccc-cCcHHHHHhcCCeEEEEECCCCCccccCCCCCCccccccccccHHHHHHHHH-HHHHH
Confidence 468999999853 43 3433 32221111246899999998764 22221 110 13456654 4677 45555
Q ss_pred c-cCC--ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCC
Q 012188 249 P-NKV--KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 249 ~-l~~--~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~ 290 (468)
+ +++ ++++|+||||||++|+.++.++|+++++++++++....
T Consensus 107 ~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~ 151 (280)
T 1dqz_A 107 ANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNP 151 (280)
T ss_dssp HHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCT
T ss_pred HHcCCCCCceEEEEECHHHHHHHHHHHhCCchheEEEEecCcccc
Confidence 5 666 48999999999999999999999999999999987644
|
| >2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A | Back alignment and structure |
|---|
Probab=99.47 E-value=2.2e-14 Score=137.98 Aligned_cols=108 Identities=19% Similarity=0.208 Sum_probs=86.2
Q ss_pred CCCCeEEEEecCCCC----------ccch----hhhhhhccccCCCcce---EEEECCCCCCCCCCCC---CCCCCHHHH
Q 012188 179 SSSRDTLFVKTQGPS----------AFWT----ETLFPNFSSASKSTYR---LFAIDLLGFGRSPKPT---DSLYTVREH 238 (468)
Q Consensus 179 ~~~p~vl~lHG~g~s----------~~~~----~~~~~~L~~~~~~gy~---Via~D~~G~G~S~~~~---~~~~t~~~~ 238 (468)
..+++|||+||++++ ...| ..+.+.|. ++||+ |+++|++|+|.|+.+. ...+..+++
T Consensus 38 ~~~~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~~~l~~~L~---~~Gy~~~~V~~~D~~g~G~S~~~~~~~~~~~~~~~l 114 (342)
T 2x5x_A 38 ATKTPVIFIHGNGDNAISFDMPPGNVSGYGTPARSVYAELK---ARGYNDCEIFGVTYLSSSEQGSAQYNYHSSTKYAII 114 (342)
T ss_dssp CCSCCEEEECCTTCCGGGGGCCCCCCTTTCCCSSCHHHHHH---HTTCCTTSEEEECCSCHHHHTCGGGCCBCHHHHHHH
T ss_pred CCCCeEEEECCcCCCcccccccccccccccccHHHHHHHHH---hCCCCCCeEEEEeCCCCCccCCccccCCHHHHHHHH
Confidence 346789999999884 2233 34666665 46898 9999999999986542 123456777
Q ss_pred HHHHHHHHhcccCCceEEEEEEcccHHHHHHHHHhC--CCccceEEEecCCCCC
Q 012188 239 LDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKH--PGSVKSLTLLAPPYYP 290 (468)
Q Consensus 239 ~~di~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~--p~~v~~lVl~~p~~~~ 290 (468)
.+++ ..++++++.++++||||||||.+++.++.++ |++|+++|+++++...
T Consensus 115 ~~~I-~~l~~~~g~~~v~LVGHSmGG~iA~~~a~~~~~p~~V~~lVlla~p~~G 167 (342)
T 2x5x_A 115 KTFI-DKVKAYTGKSQVDIVAHSMGVSMSLATLQYYNNWTSVRKFINLAGGIRG 167 (342)
T ss_dssp HHHH-HHHHHHHTCSCEEEEEETHHHHHHHHHHHHHTCGGGEEEEEEESCCTTC
T ss_pred HHHH-HHHHHHhCCCCEEEEEECHHHHHHHHHHHHcCchhhhcEEEEECCCccc
Confidence 7777 6888888889999999999999999999998 9999999999987654
|
| >1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A | Back alignment and structure |
|---|
Probab=99.46 E-value=4.2e-15 Score=148.23 Aligned_cols=107 Identities=14% Similarity=0.177 Sum_probs=82.2
Q ss_pred cCCCCeEEEEecCCCCc--cchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhccc-----
Q 012188 178 SSSSRDTLFVKTQGPSA--FWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPN----- 250 (468)
Q Consensus 178 ~~~~p~vl~lHG~g~s~--~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l----- 250 (468)
++++|++|++||++++. .|...+.+.+. .+.+|+|+++|+||+|.|..+. ..++.+.+++++ ..+++.+
T Consensus 67 ~~~~p~vvliHG~~~s~~~~w~~~l~~~ll--~~~~~~VI~vD~~g~g~s~y~~-~~~~~~~~a~~l-~~ll~~L~~~~g 142 (450)
T 1rp1_A 67 QTDKKTRFIIHGFIDKGEENWLLDMCKNMF--KVEEVNCICVDWKKGSQTSYTQ-AANNVRVVGAQV-AQMLSMLSANYS 142 (450)
T ss_dssp CTTSEEEEEECCCCCTTCTTHHHHHHHHHT--TTCCEEEEEEECHHHHSSCHHH-HHHHHHHHHHHH-HHHHHHHHHHHC
T ss_pred CCCCCeEEEEccCCCCCCcchHHHHHHHHH--hcCCeEEEEEeCccccCCcchH-HHHHHHHHHHHH-HHHHHHHHHhcC
Confidence 56789999999998765 36554555543 1248999999999999875221 224566677777 4666654
Q ss_pred -CCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCC
Q 012188 251 -KVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYY 289 (468)
Q Consensus 251 -~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~ 289 (468)
+.++++||||||||.+|..+|.++|+ +.++++++|...
T Consensus 143 ~~~~~v~LVGhSlGg~vA~~~a~~~p~-v~~iv~Ldpa~p 181 (450)
T 1rp1_A 143 YSPSQVQLIGHSLGAHVAGEAGSRTPG-LGRITGLDPVEA 181 (450)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHTSTT-CCEEEEESCCCT
T ss_pred CChhhEEEEEECHhHHHHHHHHHhcCC-cccccccCcccc
Confidence 46899999999999999999999999 999999997653
|
| >1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.45 E-value=8.6e-13 Score=124.22 Aligned_cols=105 Identities=11% Similarity=0.083 Sum_probs=71.9
Q ss_pred CCeEEEEecCCC--C-ccchhh--hhhhccccCCCcceEEEECCCCCC-CCCCCCCCCCCH-HHHHHHHHHHHhcc-cCC
Q 012188 181 SRDTLFVKTQGP--S-AFWTET--LFPNFSSASKSTYRLFAIDLLGFG-RSPKPTDSLYTV-REHLDMIEKSVIEP-NKV 252 (468)
Q Consensus 181 ~p~vl~lHG~g~--s-~~~~~~--~~~~L~~~~~~gy~Via~D~~G~G-~S~~~~~~~~t~-~~~~~di~~~l~~~-l~~ 252 (468)
.|+||++||++. + ..|... +...+. +.+|.|+++|.++.+ .++......... ..+++++ ..+++. +++
T Consensus 34 ~p~vvllHG~~~~~~~~~w~~~~~~~~~~~---~~~~~vv~pd~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~i~~~~~~ 109 (280)
T 1r88_A 34 PHAVYLLDAFNAGPDVSNWVTAGNAMNTLA---GKGISVVAPAGGAYSMYTNWEQDGSKQWDTFLSAEL-PDWLAANRGL 109 (280)
T ss_dssp SSEEEEECCSSCCSSSCHHHHTSCHHHHHT---TSSSEEEEECCCTTSTTSBCSSCTTCBHHHHHHTHH-HHHHHHHSCC
T ss_pred CCEEEEECCCCCCCChhhhhhcccHHHHHh---cCCeEEEEECCCCCCccCCCCCCCCCcHHHHHHHHH-HHHHHHHCCC
Confidence 478999999852 3 234331 233343 478999999997642 222111111234 3345566 355554 776
Q ss_pred c--eEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCC
Q 012188 253 K--SFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYY 289 (468)
Q Consensus 253 ~--~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~ 289 (468)
+ +++|+||||||++|+.+|.++|+++++++++++...
T Consensus 110 ~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~ 148 (280)
T 1r88_A 110 APGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLY 148 (280)
T ss_dssp CSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCC
T ss_pred CCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccC
Confidence 5 899999999999999999999999999999998754
|
| >3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.1e-13 Score=137.47 Aligned_cols=109 Identities=17% Similarity=0.187 Sum_probs=81.5
Q ss_pred CCCCeEEEEecCCCCccch---hhhhhhccccCCCcceEEEECCCCCCCCCCCC--------C-CCCCHHHHHHHHHHHH
Q 012188 179 SSSRDTLFVKTQGPSAFWT---ETLFPNFSSASKSTYRLFAIDLLGFGRSPKPT--------D-SLYTVREHLDMIEKSV 246 (468)
Q Consensus 179 ~~~p~vl~lHG~g~s~~~~---~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~--------~-~~~t~~~~~~di~~~l 246 (468)
+++.||+|+||+.++...+ ..++..++. +-++.|+++|+||||+|.... . ...+.+++++|+ ..+
T Consensus 36 ~~g~Pi~l~~Ggeg~~~~~~~~~g~~~~lA~--~~~~~Vi~~DhRg~G~S~p~~~~~~~~~~~l~~lt~~q~~~Dl-~~~ 112 (446)
T 3n2z_B 36 KNGGSILFYTGNEGDIIWFCNNTGFMWDVAE--ELKAMLVFAEHRYYGESLPFGDNSFKDSRHLNFLTSEQALADF-AEL 112 (446)
T ss_dssp TTTCEEEEEECCSSCHHHHHHHCHHHHHHHH--HHTEEEEEECCTTSTTCCTTGGGGGSCTTTSTTCSHHHHHHHH-HHH
T ss_pred CCCCCEEEEeCCCCcchhhhhcccHHHHHHH--HhCCcEEEEecCCCCCCCCCCccccccchhhccCCHHHHHHHH-HHH
Confidence 4556899999988754321 112333331 126799999999999995321 1 234789999999 577
Q ss_pred hcccCC-------ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCC
Q 012188 247 IEPNKV-------KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 247 ~~~l~~-------~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~ 290 (468)
++.++. .+++++||||||.+|+.++.+||+.|.++|+.+++...
T Consensus 113 ~~~l~~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~~v~g~i~ssapv~~ 163 (446)
T 3n2z_B 113 IKHLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPIWQ 163 (446)
T ss_dssp HHHHHHHSTTGGGCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCTTC
T ss_pred HHHHHHhcccCCCCCEEEEEeCHHHHHHHHHHHhhhccccEEEEeccchhc
Confidence 766543 38999999999999999999999999999999877654
|
| >1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.42 E-value=2.6e-12 Score=122.42 Aligned_cols=107 Identities=17% Similarity=0.107 Sum_probs=73.2
Q ss_pred CCCeEEEEecCC--CCc-cchhh--hhhhccccCCCcceEEEECCCCC-CCCCCCCC-------CCCCHHHHH-HHHHHH
Q 012188 180 SSRDTLFVKTQG--PSA-FWTET--LFPNFSSASKSTYRLFAIDLLGF-GRSPKPTD-------SLYTVREHL-DMIEKS 245 (468)
Q Consensus 180 ~~p~vl~lHG~g--~s~-~~~~~--~~~~L~~~~~~gy~Via~D~~G~-G~S~~~~~-------~~~t~~~~~-~di~~~ 245 (468)
+.|+|+++||++ ++. .|... +...+. +.+|.|+++|.++. +.++.... ..+.+++++ +++ ..
T Consensus 33 ~~p~vvllHG~~~~~~~~~w~~~~~~~~~~~---~~~~~vv~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l-~~ 108 (304)
T 1sfr_A 33 NSPALYLLDGLRAQDDFSGWDINTPAFEWYD---QSGLSVVMPVGGQSSFYSDWYQPACGKAGCQTYKWETFLTSEL-PG 108 (304)
T ss_dssp TBCEEEEECCTTCCSSSCHHHHHCCHHHHHT---TSSCEEEEECCCTTCTTCBCSSCEEETTEEECCBHHHHHHTHH-HH
T ss_pred CCCEEEEeCCCCCCCCcchhhcCCCHHHHHh---cCCeEEEEECCCCCccccccCCccccccccccccHHHHHHHHH-HH
Confidence 458899999984 333 34432 123333 46899999999764 22221110 134566654 566 34
Q ss_pred Hhcc-cCCc--eEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCC
Q 012188 246 VIEP-NKVK--SFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 246 l~~~-l~~~--~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~ 290 (468)
+++. ++++ +++|+||||||++|+.++.++|+++++++++++....
T Consensus 109 ~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~ 156 (304)
T 1sfr_A 109 WLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDP 156 (304)
T ss_dssp HHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCT
T ss_pred HHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCc
Confidence 4444 5654 8999999999999999999999999999999987643
|
| >3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A | Back alignment and structure |
|---|
Probab=99.41 E-value=4e-12 Score=131.96 Aligned_cols=121 Identities=12% Similarity=0.005 Sum_probs=82.5
Q ss_pred cCCCCceeEEEecC----CCCeEEEEecCCCCccchhhh---h-hhccccCCCcceEEEECCCCCCCCCCCCCCCCC-HH
Q 012188 166 WSDCDCKFCTCWSS----SSRDTLFVKTQGPSAFWTETL---F-PNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYT-VR 236 (468)
Q Consensus 166 ~~d~~~~~~~~~~~----~~p~vl~lHG~g~s~~~~~~~---~-~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t-~~ 236 (468)
..||..+.+..|.+ +.|+||+.||++........+ . ..|. ++||.|+++|+||+|.|++....... .+
T Consensus 16 ~~DG~~L~~~~~~P~~~~~~P~vv~~~~~g~~~~~~~~y~~~~~~~la---~~Gy~vv~~D~RG~G~S~g~~~~~~~~~~ 92 (587)
T 3i2k_A 16 MRDGVRLAVDLYRPDADGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFV---RDGYAVVIQDTRGLFASEGEFVPHVDDEA 92 (587)
T ss_dssp CTTSCEEEEEEEEECCSSCEEEEEEEESSCTTCHHHHHTTTCCTHHHH---HTTCEEEEEECTTSTTCCSCCCTTTTHHH
T ss_pred CCCCCEEEEEEEECCCCCCeeEEEEECCcCCCccccccchhhHHHHHH---HCCCEEEEEcCCCCCCCCCccccccchhH
Confidence 34777777777633 236788889887654321111 1 3333 58999999999999999876543222 22
Q ss_pred HHHHHHHHHHhccc-CCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCC-CCC
Q 012188 237 EHLDMIEKSVIEPN-KVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPP-YYP 290 (468)
Q Consensus 237 ~~~~di~~~l~~~l-~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~-~~~ 290 (468)
|..+.+ +.+.++- ...+++++||||||.+++.+|.++|+.++++|..+++ ...
T Consensus 93 D~~~~i-~~l~~~~~~~~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~~~d~ 147 (587)
T 3i2k_A 93 DAEDTL-SWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADLY 147 (587)
T ss_dssp HHHHHH-HHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCTC
T ss_pred HHHHHH-HHHHhCCCCCCeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCccccc
Confidence 332222 2333221 1258999999999999999999999999999999987 543
|
| >2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A | Back alignment and structure |
|---|
Probab=99.36 E-value=1.5e-11 Score=129.05 Aligned_cols=120 Identities=11% Similarity=-0.039 Sum_probs=81.5
Q ss_pred CCCCceeEEEecC----CCCeEEEEecCCCCc----cc-----hhhh--h-hhccccCCCcceEEEECCCCCCCCCCCCC
Q 012188 167 SDCDCKFCTCWSS----SSRDTLFVKTQGPSA----FW-----TETL--F-PNFSSASKSTYRLFAIDLLGFGRSPKPTD 230 (468)
Q Consensus 167 ~d~~~~~~~~~~~----~~p~vl~lHG~g~s~----~~-----~~~~--~-~~L~~~~~~gy~Via~D~~G~G~S~~~~~ 230 (468)
.||..+....|.+ ..|+||++||++... .+ ...+ . ..|+ ++||.|+.+|+||+|.|.+...
T Consensus 45 ~DG~~L~~~l~~P~~~~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la---~~GyaVv~~D~RG~g~S~g~~~ 121 (652)
T 2b9v_A 45 RDGVKLYTVIVIPKNARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFV---EGGYIRVFQDIRGKYGSQGDYV 121 (652)
T ss_dssp TTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHH---HTTCEEEEEECTTSTTCCSCCC
T ss_pred CCCcEEEEEEEecCCCCCccEEEEECCCCCCcccccccccccccccccchHHHHH---hCCCEEEEEecCcCCCCCCccc
Confidence 4776677666632 236788889876531 11 1111 1 3333 5899999999999999976543
Q ss_pred CC------------CCHHHHHHHHHHHHhcccCC--ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCC
Q 012188 231 SL------------YTVREHLDMIEKSVIEPNKV--KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 231 ~~------------~t~~~~~~di~~~l~~~l~~--~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~ 290 (468)
.. ...+|..+.+ +.+.++.+. .++.++|+||||++++.+|.++|+.++++|..++....
T Consensus 122 ~~~~~~~~~~~~g~~~~~D~~~~i-~~l~~~~~~~d~rvgl~G~SyGG~~al~~a~~~~~~lka~v~~~~~~d~ 194 (652)
T 2b9v_A 122 MTRPPHGPLNPTKTDETTDAWDTV-DWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMVDG 194 (652)
T ss_dssp TTCCCSBTTBCSSCCHHHHHHHHH-HHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEECCCT
T ss_pred ccccccccccccccchhhHHHHHH-HHHHhcCCCCCCCEEEEecCHHHHHHHHHHhcCCCceEEEEeccccccc
Confidence 21 2234444444 444444232 48999999999999999999999999999999987654
|
| >2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus} | Back alignment and structure |
|---|
Probab=99.33 E-value=5.4e-14 Score=139.01 Aligned_cols=108 Identities=18% Similarity=0.246 Sum_probs=78.2
Q ss_pred cCCCCeEEEEecCCCC---------ccch---hhhhhhccccCCCcceEEEECCCCCCCCCCCCC---------------
Q 012188 178 SSSSRDTLFVKTQGPS---------AFWT---ETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD--------------- 230 (468)
Q Consensus 178 ~~~~p~vl~lHG~g~s---------~~~~---~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~--------------- 230 (468)
.+++++|||+||++++ ..|. ..+.+.|. ++||+|+++|+||||.|.....
T Consensus 49 ~~~~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~---~~Gy~Via~Dl~G~G~S~~~~~~l~~~i~~g~g~sg~ 125 (431)
T 2hih_A 49 PKNKDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLR---KAGYETYEASVSALASNHERAVELYYYLKGGRVDYGA 125 (431)
T ss_dssp CSCSSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHH---HTTCCEEEECCCSSSCHHHHHHHHHHHHHCEEEECCH
T ss_pred cCCCCeEEEECCCCCCcccccccchhhhhccHHHHHHHHH---hCCCEEEEEcCCCCCCCccchHHhhhhhhhccccccc
Confidence 3467899999998763 2342 24667765 4799999999999998852110
Q ss_pred ---CCCCHHHHHHHHHHHHhcccCC-ceEEEEEEcccHHHHHHHHHh--------------------------CCCccce
Q 012188 231 ---SLYTVREHLDMIEKSVIEPNKV-KSFHIVAHSLGCILALALAVK--------------------------HPGSVKS 280 (468)
Q Consensus 231 ---~~~t~~~~~~di~~~l~~~l~~-~~i~lvGhS~Gg~ial~~a~~--------------------------~p~~v~~ 280 (468)
..++++++++++ ..++++++. ++++||||||||.+++.+|.. +|++|.+
T Consensus 126 ~~~~~~~~~~~a~dl-~~ll~~l~~~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~V~s 204 (431)
T 2hih_A 126 AHSEKYGHERYGKTY-EGVLKDWKPGHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNMVTS 204 (431)
T ss_dssp HHHHHHTCCSEEEEE-CCSCTTCBTTBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSCEEE
T ss_pred cccccCCHHHHHHHH-HHHHHHhCCCCCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcccceeE
Confidence 012233334444 355666653 799999999999999999876 7899999
Q ss_pred EEEecCCCC
Q 012188 281 LTLLAPPYY 289 (468)
Q Consensus 281 lVl~~p~~~ 289 (468)
+|+++++..
T Consensus 205 lv~i~tP~~ 213 (431)
T 2hih_A 205 ITTIATPHN 213 (431)
T ss_dssp EEEESCCTT
T ss_pred EEEECCCCC
Confidence 999998754
|
| >3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=1.1e-11 Score=123.12 Aligned_cols=79 Identities=13% Similarity=0.017 Sum_probs=53.3
Q ss_pred CCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccC---CceEEEEEEcccHHHHHHHHHhCC----C-ccc
Q 012188 208 SKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNK---VKSFHIVAHSLGCILALALAVKHP----G-SVK 279 (468)
Q Consensus 208 ~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~---~~~i~lvGhS~Gg~ial~~a~~~p----~-~v~ 279 (468)
+++||.|+++|++|+|.+..... ..-....+.+ ++..+..+ ..++.++|||+||..++.+|...| + .+.
T Consensus 152 l~~G~~Vv~~Dy~G~G~~y~~~~--~~~~~vlD~v-rAa~~~~~~~~~~~v~l~G~S~GG~aal~aa~~~~~yapel~~~ 228 (462)
T 3guu_A 152 LQQGYYVVSSDHEGFKAAFIAGY--EEGMAILDGI-RALKNYQNLPSDSKVALEGYSGGAHATVWATSLAESYAPELNIV 228 (462)
T ss_dssp HHTTCEEEEECTTTTTTCTTCHH--HHHHHHHHHH-HHHHHHTTCCTTCEEEEEEETHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred HhCCCEEEEecCCCCCCcccCCc--chhHHHHHHH-HHHHHhccCCCCCCEEEEeeCccHHHHHHHHHhChhhcCccceE
Confidence 34999999999999997532211 0112223333 33332223 268999999999999998887654 3 588
Q ss_pred eEEEecCCCC
Q 012188 280 SLTLLAPPYY 289 (468)
Q Consensus 280 ~lVl~~p~~~ 289 (468)
+.+..+++..
T Consensus 229 g~~~~~~p~d 238 (462)
T 3guu_A 229 GASHGGTPVS 238 (462)
T ss_dssp EEEEESCCCB
T ss_pred EEEEecCCCC
Confidence 9999888764
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
Probab=99.33 E-value=7.9e-13 Score=130.68 Aligned_cols=117 Identities=13% Similarity=0.043 Sum_probs=76.2
Q ss_pred CCCceeEEEec-----CCCCeEEEEecCCCCccch--------------h----hhhhhccccCCCcceEEEECCCCCCC
Q 012188 168 DCDCKFCTCWS-----SSSRDTLFVKTQGPSAFWT--------------E----TLFPNFSSASKSTYRLFAIDLLGFGR 224 (468)
Q Consensus 168 d~~~~~~~~~~-----~~~p~vl~lHG~g~s~~~~--------------~----~~~~~L~~~~~~gy~Via~D~~G~G~ 224 (468)
++..+..+.+. ++.|+||++||++++.... . .+...|+ ++||.|+++|+||+|.
T Consensus 96 ~g~~l~~~l~~P~~~~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la---~~G~~Vl~~D~rg~G~ 172 (391)
T 3g8y_A 96 PKSVSTFLVLKPEHLKGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMV---KEGYVAVAVDNAAAGE 172 (391)
T ss_dssp TTCCEEEEEEEETTCCSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHH---TTTCEEEECCCTTSGG
T ss_pred CCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHH---HCCCEEEEecCCCccc
Confidence 55556655552 2347899999988754200 1 2344454 6899999999999999
Q ss_pred CCCCCCC----CCCHHHHH---------------HHHH---HHHhccc--CCceEEEEEEcccHHHHHHHHHhCCCccce
Q 012188 225 SPKPTDS----LYTVREHL---------------DMIE---KSVIEPN--KVKSFHIVAHSLGCILALALAVKHPGSVKS 280 (468)
Q Consensus 225 S~~~~~~----~~t~~~~~---------------~di~---~~l~~~l--~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~ 280 (468)
|..+... .+....++ .|+. +.+.+.- +.++++++||||||.+++.+|... +++++
T Consensus 173 s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~al~~a~~~-~~i~a 251 (391)
T 3g8y_A 173 ASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPMMVLGVLD-KDIYA 251 (391)
T ss_dssp GCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHHHHHHHHHC-TTCCE
T ss_pred cCCcccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChhHHHHHHHHHcC-CceeE
Confidence 9765321 13332222 2221 2333332 236899999999999999988875 57999
Q ss_pred EEEecCCC
Q 012188 281 LTLLAPPY 288 (468)
Q Consensus 281 lVl~~p~~ 288 (468)
+|+.++..
T Consensus 252 ~v~~~~~~ 259 (391)
T 3g8y_A 252 FVYNDFLC 259 (391)
T ss_dssp EEEESCBC
T ss_pred EEEccCCC
Confidence 99887643
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.32 E-value=1.1e-11 Score=122.62 Aligned_cols=115 Identities=15% Similarity=0.084 Sum_probs=74.2
Q ss_pred CCCceeEEEec-----CCCCeEEEEecCCCCccch--------------h----hhhhhccccCCCcceEEEECCCCCCC
Q 012188 168 DCDCKFCTCWS-----SSSRDTLFVKTQGPSAFWT--------------E----TLFPNFSSASKSTYRLFAIDLLGFGR 224 (468)
Q Consensus 168 d~~~~~~~~~~-----~~~p~vl~lHG~g~s~~~~--------------~----~~~~~L~~~~~~gy~Via~D~~G~G~ 224 (468)
++..+..+.+. ++.|+||++||++++.... . .+...|+ ++||.|+++|+||+|.
T Consensus 101 ~g~~l~~~l~~P~~~~~~~P~Vv~~HG~g~~~~~~~~~~g~~~~~~~~y~~~~~~~a~~la---~~Gy~Vl~~D~rG~G~ 177 (398)
T 3nuz_A 101 PKCVSTFLVLIPDNINKPVPAILCIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLTQALNFV---KEGYIAVAVDNPAAGE 177 (398)
T ss_dssp TTBCEEEEEEEESSCCSCEEEEEEECCTTCCHHHHHTCCCSSSTTCCSTTCTTTCHHHHHH---TTTCEEEEECCTTSGG
T ss_pred CCcEEEEEEEeCCCCCCCccEEEEEcCCCCCcccccccccccccccccccchHHHHHHHHH---HCCCEEEEecCCCCCc
Confidence 55555555552 2347899999987753310 0 2444454 6899999999999999
Q ss_pred CCCCCC----CCCC--------------H-----HHHHHHHHHHHhccc--CCceEEEEEEcccHHHHHHHHHhCCCccc
Q 012188 225 SPKPTD----SLYT--------------V-----REHLDMIEKSVIEPN--KVKSFHIVAHSLGCILALALAVKHPGSVK 279 (468)
Q Consensus 225 S~~~~~----~~~t--------------~-----~~~~~di~~~l~~~l--~~~~i~lvGhS~Gg~ial~~a~~~p~~v~ 279 (468)
|..... ..+. . .|....+ +.+.+.- +.+++.++||||||.+++.++...| +++
T Consensus 178 s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~al-d~l~~~~~vd~~rI~v~G~S~GG~~a~~~aa~~~-~i~ 255 (398)
T 3nuz_A 178 ASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVL-NWMKTQKHIRKDRIVVSGFSLGTEPMMVLGTLDT-SIY 255 (398)
T ss_dssp GCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHH-HHHTTCSSEEEEEEEEEEEGGGHHHHHHHHHHCT-TCC
T ss_pred cccccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHH-HHHHhCCCCCCCeEEEEEECHhHHHHHHHHhcCC-cEE
Confidence 964431 0011 1 2223333 3333332 2358999999999999998888755 789
Q ss_pred eEEEecCC
Q 012188 280 SLTLLAPP 287 (468)
Q Consensus 280 ~lVl~~p~ 287 (468)
++|..++.
T Consensus 256 a~v~~~~~ 263 (398)
T 3nuz_A 256 AFVYNDFL 263 (398)
T ss_dssp EEEEESCB
T ss_pred EEEEeccc
Confidence 98887653
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.32 E-value=7.7e-11 Score=112.82 Aligned_cols=95 Identities=16% Similarity=0.179 Sum_probs=74.0
Q ss_pred CCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccC-CceEEE
Q 012188 179 SSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNK-VKSFHI 257 (468)
Q Consensus 179 ~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~-~~~i~l 257 (468)
+++++++++||++++...|..+.+.|. +.|+++|+|+ . . ...+++++++++ ...++.+. .+++++
T Consensus 44 ~~~~~l~~~hg~~g~~~~~~~~~~~l~------~~v~~~~~~~--~--~---~~~~~~~~a~~~-~~~i~~~~~~~~~~l 109 (316)
T 2px6_A 44 SSERPLFLVHPIEGSTTVFHSLASRLS------IPTYGLQCTR--A--A---PLDSIHSLAAYY-IDCIRQVQPEGPYRV 109 (316)
T ss_dssp CSSCCEEEECCTTCCSGGGHHHHHHCS------SCEEEECCCT--T--S---CTTCHHHHHHHH-HHHHTTTCSSCCCEE
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHhcC------CCEEEEECCC--C--C---CcCCHHHHHHHH-HHHHHHhCCCCCEEE
Confidence 456789999998887765555666552 8999999993 1 1 236899999999 57777765 478999
Q ss_pred EEEcccHHHHHHHHHhCC---Cc---cceEEEecCC
Q 012188 258 VAHSLGCILALALAVKHP---GS---VKSLTLLAPP 287 (468)
Q Consensus 258 vGhS~Gg~ial~~a~~~p---~~---v~~lVl~~p~ 287 (468)
+||||||.+|+.+|.+.+ +. +++++++++.
T Consensus 110 ~G~S~Gg~va~~~a~~l~~~g~~~p~v~~l~li~~~ 145 (316)
T 2px6_A 110 AGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGS 145 (316)
T ss_dssp EEETHHHHHHHHHHHHHHHHC---CCCCEEEEESCS
T ss_pred EEECHHHHHHHHHHHHHHHcCCcccccceEEEEcCC
Confidence 999999999999998764 45 8999998865
|
| >3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=2e-11 Score=125.34 Aligned_cols=120 Identities=10% Similarity=0.007 Sum_probs=81.3
Q ss_pred cCCCCceeEEEecC----CCCeEEEEecCCCCcc--c------hh---------------hhhhhccccCCCcceEEEEC
Q 012188 166 WSDCDCKFCTCWSS----SSRDTLFVKTQGPSAF--W------TE---------------TLFPNFSSASKSTYRLFAID 218 (468)
Q Consensus 166 ~~d~~~~~~~~~~~----~~p~vl~lHG~g~s~~--~------~~---------------~~~~~L~~~~~~gy~Via~D 218 (468)
..||..+....|.+ +.|+||+.||++.... . +. .....| +++||.|+++|
T Consensus 48 ~~DG~~L~a~l~~P~~~~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~l---a~~Gy~vv~~D 124 (560)
T 3iii_A 48 MRDGEKLYINIFRPNKDGKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFW---VPNDYVVVKVA 124 (560)
T ss_dssp CTTSCEEEEEEEECSSSSCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHH---GGGTCEEEEEE
T ss_pred CCCCcEEEEEEEecCCCCCCCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHHH---HhCCCEEEEEc
Confidence 34677777776643 2378899999887531 1 00 001223 36899999999
Q ss_pred CCCCCCCCCCCCCC--CCHHHHHHHHHHHHhcccC-CceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCC
Q 012188 219 LLGFGRSPKPTDSL--YTVREHLDMIEKSVIEPNK-VKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYY 289 (468)
Q Consensus 219 ~~G~G~S~~~~~~~--~t~~~~~~di~~~l~~~l~-~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~ 289 (468)
+||+|.|.+..... ...+|..+.+ +.+.++-. ..++.++||||||.+++.+|+++|+.++++|..++...
T Consensus 125 ~RG~G~S~G~~~~~~~~~~~D~~~~i-~~l~~~~~~~~~igl~G~S~GG~~al~~a~~~p~~l~aiv~~~~~~d 197 (560)
T 3iii_A 125 LRGSDKSKGVLSPWSKREAEDYYEVI-EWAANQSWSNGNIGTNGVSYLAVTQWWVASLNPPHLKAMIPWEGLND 197 (560)
T ss_dssp CTTSTTCCSCBCTTSHHHHHHHHHHH-HHHHTSTTEEEEEEEEEETHHHHHHHHHHTTCCTTEEEEEEESCCCB
T ss_pred CCCCCCCCCccccCChhHHHHHHHHH-HHHHhCCCCCCcEEEEccCHHHHHHHHHHhcCCCceEEEEecCCccc
Confidence 99999998765421 1122333333 33333211 15899999999999999999999999999999998754
|
| >1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=9.4e-11 Score=111.16 Aligned_cols=103 Identities=9% Similarity=0.009 Sum_probs=66.1
Q ss_pred CCeEEEEecCCCCcc-ch------hhhhhhccccC-CCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccC-
Q 012188 181 SRDTLFVKTQGPSAF-WT------ETLFPNFSSAS-KSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNK- 251 (468)
Q Consensus 181 ~p~vl~lHG~g~s~~-~~------~~~~~~L~~~~-~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~- 251 (468)
.|+|+++||++++.. |. ..+...|...- -.+|.|+++|.+| .+... ..+ ...+++++...+.+.+.
T Consensus 69 ~Pvlv~lHG~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ivv~pd~~~--~~~~~--~~~-~~~~~~~l~~~i~~~~~~ 143 (297)
T 1gkl_A 69 YNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNG--GNCTA--QNF-YQEFRQNVIPFVESKYST 143 (297)
T ss_dssp CEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHTTSSCCEEEEECCSCS--TTCCT--TTH-HHHHHHTHHHHHHHHSCS
T ss_pred CCEEEEECCCCCCcchhhcccchHHHHHHHHHHcCCCCCEEEEEecCcC--Cccch--HHH-HHHHHHHHHHHHHHhCCc
Confidence 467888999876433 32 12333333100 0359999999875 22211 111 23344555322322332
Q ss_pred -------------CceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCC
Q 012188 252 -------------VKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPY 288 (468)
Q Consensus 252 -------------~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~ 288 (468)
.++++|+|+||||.+++.++.++|+++++++++++..
T Consensus 144 ~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p~~f~~~v~~sg~~ 193 (297)
T 1gkl_A 144 YAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDY 193 (297)
T ss_dssp SCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCC
T ss_pred cccccccccccCCccceEEEEECHHHHHHHHHHHhCchhhheeeEecccc
Confidence 2469999999999999999999999999999999865
|
| >2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A | Back alignment and structure |
|---|
Probab=99.20 E-value=5.1e-11 Score=116.08 Aligned_cols=103 Identities=17% Similarity=0.228 Sum_probs=71.6
Q ss_pred CCCCeEEEEecCCCCc--------cchh---hhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHH----
Q 012188 179 SSSRDTLFVKTQGPSA--------FWTE---TLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIE---- 243 (468)
Q Consensus 179 ~~~p~vl~lHG~g~s~--------~~~~---~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~---- 243 (468)
++++||||+||++++. +|.. .+.+.|. ++||+|+++|+||||.|... ..++.+.+.
T Consensus 4 ~~~~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~---~~G~~Via~Dl~g~G~s~~~------a~~l~~~i~~~~v 74 (387)
T 2dsn_A 4 ANDAPIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLN---DNGYRTYTLAVGPLSSNWDR------ACEAYAQLVGGTV 74 (387)
T ss_dssp CCCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHH---HTTCCEEEECCCSSBCHHHH------HHHHHHHHHCEEE
T ss_pred CCCCcEEEECCCCCCCcccccccchhhhhhHHHHHHHH---HCCCEEEEecCCCCCCcccc------HHHHHHHHHhhhh
Confidence 3568899999987643 2432 1225564 47999999999999977421 112222221
Q ss_pred -------------------HHHhcc-cCCceEEEEEEcccHHHHHHHHHh-------------------CC------Ccc
Q 012188 244 -------------------KSVIEP-NKVKSFHIVAHSLGCILALALAVK-------------------HP------GSV 278 (468)
Q Consensus 244 -------------------~~l~~~-l~~~~i~lvGhS~Gg~ial~~a~~-------------------~p------~~v 278 (468)
..++++ .+.++++||||||||.++..++.+ +| ++|
T Consensus 75 Dy~~~~a~~~~~~~~~~~l~~ll~~~~~~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~~~V 154 (387)
T 2dsn_A 75 DYGAAHAAKHGHARFGRTYPGLLPELKRGGRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGHHFV 154 (387)
T ss_dssp ECCHHHHHHHTSCSEEEEECCSCGGGGTTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCE
T ss_pred hhhhhhhhhccchhhhhhHHHHHHHhcCCCceEEEEECHHHHHHHHHHHHhccccccccccccccccccCccccccccce
Confidence 012223 567899999999999999999973 36 799
Q ss_pred ceEEEecCCCCC
Q 012188 279 KSLTLLAPPYYP 290 (468)
Q Consensus 279 ~~lVl~~p~~~~ 290 (468)
+++|+++++...
T Consensus 155 ~sLV~i~tP~~G 166 (387)
T 2dsn_A 155 LSVTTIATPHDG 166 (387)
T ss_dssp EEEEEESCCTTC
T ss_pred eEEEEECCCCCC
Confidence 999999987654
|
| >2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=99.14 E-value=2.5e-10 Score=106.91 Aligned_cols=42 Identities=14% Similarity=0.283 Sum_probs=36.2
Q ss_pred hcccCC--ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCC
Q 012188 247 IEPNKV--KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPY 288 (468)
Q Consensus 247 ~~~l~~--~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~ 288 (468)
.+.++. ++++++||||||.+++.++.++|+.++++++++|..
T Consensus 144 ~~~~~~~~~~~~~~G~S~GG~~a~~~~~~~p~~f~~~~~~s~~~ 187 (275)
T 2qm0_A 144 EKNFEIDKGKQTLFGHXLGGLFALHILFTNLNAFQNYFISSPSI 187 (275)
T ss_dssp HHHSCEEEEEEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCT
T ss_pred HhhccCCCCCCEEEEecchhHHHHHHHHhCchhhceeEEeCcee
Confidence 344544 589999999999999999999999999999998764
|
| >3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=4.8e-10 Score=110.87 Aligned_cols=105 Identities=10% Similarity=0.026 Sum_probs=65.5
Q ss_pred CCCeEEEEecCCCC--ccchhhhhhhccccCCCcc----eEEEECCCCC-CCCCCCCCCCCCHHHH-HHHHHHHHhcccC
Q 012188 180 SSRDTLFVKTQGPS--AFWTETLFPNFSSASKSTY----RLFAIDLLGF-GRSPKPTDSLYTVREH-LDMIEKSVIEPNK 251 (468)
Q Consensus 180 ~~p~vl~lHG~g~s--~~~~~~~~~~L~~~~~~gy----~Via~D~~G~-G~S~~~~~~~~t~~~~-~~di~~~l~~~l~ 251 (468)
..|+|+++||.+.. .... .++..|. ++|+ .|+++|.+|+ +++.... ......++ ++++...+.+.++
T Consensus 196 ~~PvlvllHG~~~~~~~~~~-~~~~~l~---~~g~~~p~iVV~~d~~~~~~r~~~~~-~~~~~~~~l~~el~~~i~~~~~ 270 (403)
T 3c8d_A 196 ERPLAVLLDGEFWAQSMPVW-PVLTSLT---HRQQLPPAVYVLIDAIDTTHRAHELP-CNADFWLAVQQELLPLVKVIAP 270 (403)
T ss_dssp CCCEEEESSHHHHHHTSCCH-HHHHHHH---HTTSSCSCEEEEECCCSHHHHHHHSS-SCHHHHHHHHHTHHHHHHHHSC
T ss_pred CCCEEEEeCCHHHhhcCcHH-HHHHHHH---HcCCCCCeEEEEECCCCCccccccCC-ChHHHHHHHHHHHHHHHHHHCC
Confidence 34889999995321 1111 2344443 3555 4999999873 2221111 01122222 3444233333343
Q ss_pred ----CceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCC
Q 012188 252 ----VKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYY 289 (468)
Q Consensus 252 ----~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~ 289 (468)
.++++|+||||||.+++.++.++|+.+++++++++...
T Consensus 271 ~~~d~~~~~l~G~S~GG~~al~~a~~~p~~f~~~~~~sg~~~ 312 (403)
T 3c8d_A 271 FSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYW 312 (403)
T ss_dssp CCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTT
T ss_pred CCCCCCceEEEEECHHHHHHHHHHHhCchhhcEEEEeccccc
Confidence 35899999999999999999999999999999998753
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=98.88 E-value=1.7e-07 Score=93.32 Aligned_cols=111 Identities=14% Similarity=0.018 Sum_probs=70.1
Q ss_pred CCCeEEEEecCCCCccchhhhh---hhcc-----------ccCCCcceEEEECC-CCCCCCCCCCCC-CCCHHHHHHHHH
Q 012188 180 SSRDTLFVKTQGPSAFWTETLF---PNFS-----------SASKSTYRLFAIDL-LGFGRSPKPTDS-LYTVREHLDMIE 243 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~~~~~---~~L~-----------~~~~~gy~Via~D~-~G~G~S~~~~~~-~~t~~~~~~di~ 243 (468)
++|.+|++||+|+++.....+. |..- ....+..+++.+|+ +|.|.|...... ..+..+.++++.
T Consensus 47 ~~Pl~lwlnGGPG~Ss~~g~~~e~GP~~~~~~~~~l~~n~~sw~~~~~~lfiDqP~GtGfS~~~~~~~~~~~~~~a~~~~ 126 (452)
T 1ivy_A 47 NSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAGVGFSYSDDKFYATNDTEVAQSNF 126 (452)
T ss_dssp GSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCGGGSSEEEEECCSTTSTTCEESSCCCCCBHHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHhcCCcEEeCCCceeeeCCCcccccccEEEEecCCCCCcCCcCCCCCcCCcHHHHHHHH
Confidence 4689999999998665432221 1110 00125689999996 799999633221 112333444331
Q ss_pred ---HHHhcc---cCCceEEEEEEcccHHHHHHHHHh----CCCccceEEEecCCCCC
Q 012188 244 ---KSVIEP---NKVKSFHIVAHSLGCILALALAVK----HPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 244 ---~~l~~~---l~~~~i~lvGhS~Gg~ial~~a~~----~p~~v~~lVl~~p~~~~ 290 (468)
..+++. +...+++|.|+|+||..+..+|.. .+-.++++++.+|...+
T Consensus 127 ~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i~~~~~~~l~g~~ign~~~d~ 183 (452)
T 1ivy_A 127 EALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGLSSY 183 (452)
T ss_dssp HHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCCSBH
T ss_pred HHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHHHhcCccccceEEecCCccCh
Confidence 233333 455799999999999966555543 45679999999987643
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=98.75 E-value=7.8e-07 Score=89.30 Aligned_cols=70 Identities=7% Similarity=0.100 Sum_probs=55.6
Q ss_pred chHHHhhccCCCcEEEEeeCCCCccChhhHHHHHHhCC-------------------------------------CCeEE
Q 012188 387 GYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIP-------------------------------------RARVK 429 (468)
Q Consensus 387 ~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p-------------------------------------~~~l~ 429 (468)
..+..++.+ .++|||.+|+.|.+++.--.+.+.+.+. +.++.
T Consensus 363 ~~l~~LL~~-girVLIYsGD~D~icn~~Gt~~~i~~L~W~g~~~f~~~~~~~~W~~~~~~~~~~~~vaG~vk~~~nLTFv 441 (483)
T 1ac5_A 363 HLLPGLLES-GIEIVLFNGDKDLICNNKGVLDTIDNLKWGGIKGFSDDAVSFDWIHKSKSTDDSEEFSGYVKYDRNLTFV 441 (483)
T ss_dssp GGHHHHHHT-TCEEEEEEETTCSTTCHHHHHHHHHHCEETTEESSCTTCEEEEEEECSSTTCCCCSCCEEEEEETTEEEE
T ss_pred HHHHHHHhc-CceEEEEECCcCcccCcHHHHHHHHhcCcccccccccCCCceeeEECCccccCccccceEEEEecCeEEE
Confidence 445555554 6899999999999999887776655432 23567
Q ss_pred EecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 430 VIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 430 ~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
.+.++||++.. ++|+...+.+..||+..
T Consensus 442 tV~gAGHmVP~-dqP~~al~m~~~fl~~~ 469 (483)
T 1ac5_A 442 SVYNASHMVPF-DKSLVSRGIVDIYSNDV 469 (483)
T ss_dssp EETTCCSSHHH-HCHHHHHHHHHHHTTCC
T ss_pred EECCccccCcc-hhHHHHHHHHHHHHCCc
Confidence 78999999997 99999999999999764
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=98.73 E-value=9e-08 Score=90.90 Aligned_cols=44 Identities=7% Similarity=0.107 Sum_probs=38.2
Q ss_pred CCcEEEEeeCCCCccChhhHHHHHHhCC------CCeEEEecCCCccccc
Q 012188 397 KCDVNVFHGEDDELIPVECSYNVQRKIP------RARVKVIEKKDHITIV 440 (468)
Q Consensus 397 ~~PvLii~G~~D~~vp~~~~~~l~~~~p------~~~l~~i~~~gH~~~~ 440 (468)
..|++++||++|.+||++.++++.+.+. ++++++++++||....
T Consensus 90 ~~Pvli~HG~~D~vVP~~~s~~~~~~L~~~g~~~~ve~~~~~g~gH~~~~ 139 (318)
T 2d81_A 90 QRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPT 139 (318)
T ss_dssp GCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEE
T ss_pred CCcEEEEeCCCCCCcCHHHHHHHHHHHHhcCCCcceEEEEeCCCCCCCcc
Confidence 4699999999999999999999888663 4688999999998765
|
| >2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=7e-08 Score=90.34 Aligned_cols=39 Identities=15% Similarity=0.205 Sum_probs=33.8
Q ss_pred cccCC--ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCC
Q 012188 248 EPNKV--KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPP 287 (468)
Q Consensus 248 ~~l~~--~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~ 287 (468)
+.++. ++++|+||||||++++.++.+ |+.++++++++|.
T Consensus 134 ~~~~~~~~r~~i~G~S~GG~~a~~~~~~-p~~f~~~~~~s~~ 174 (278)
T 2gzs_A 134 QGLNIDRQRRGLWGHSYGGLFVLDSWLS-SSYFRSYYSASPS 174 (278)
T ss_dssp TTSCEEEEEEEEEEETHHHHHHHHHHHH-CSSCSEEEEESGG
T ss_pred HhccCCCCceEEEEECHHHHHHHHHHhC-ccccCeEEEeCcc
Confidence 34444 469999999999999999999 9999999999875
|
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=1.8e-05 Score=77.71 Aligned_cols=111 Identities=14% Similarity=0.070 Sum_probs=68.6
Q ss_pred CCCeEEEEecCCCCccchhhhh---hhcc----------ccCCCcceEEEECC-CCCCCCCCCCCCCCCHHHHHHHHH--
Q 012188 180 SSRDTLFVKTQGPSAFWTETLF---PNFS----------SASKSTYRLFAIDL-LGFGRSPKPTDSLYTVREHLDMIE-- 243 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~~~~~---~~L~----------~~~~~gy~Via~D~-~G~G~S~~~~~~~~t~~~~~~di~-- 243 (468)
++|.+|+++|+|+++.....+. |... ....+..+++.+|. .|.|.|........+.++.++++.
T Consensus 43 ~~Pl~lwlnGGPG~SS~~g~~~e~GP~~~~~~~~l~~n~~sW~~~an~lfiDqPvGtGfSy~~~~~~~~~~~~a~~~~~f 122 (421)
T 1cpy_A 43 KDPVILWLNGGPGCSSLTGLFFALGPSSIGPDLKPIGNPYSWNSNATVIFLDQPVNVGFSYSGSSGVSNTVAAGKDVYNF 122 (421)
T ss_dssp TSCEEEEECCTTTBCTHHHHTTTTSSEEEETTTEEEECTTCGGGGSEEECCCCSTTSTTCEESSCCCCSSHHHHHHHHHH
T ss_pred CCCEEEEECCCCchHhHHHHHHccCCcEECCCCceeECCcccccccCEEEecCCCcccccCCCCCCCCChHHHHHHHHHH
Confidence 4689999999998655332111 2100 00114568999995 599999543322344555566652
Q ss_pred -HHHhc---ccCC--ceEEEEEEcccHHHHHHHHHhC------CCccceEEEecCCCCC
Q 012188 244 -KSVIE---PNKV--KSFHIVAHSLGCILALALAVKH------PGSVKSLTLLAPPYYP 290 (468)
Q Consensus 244 -~~l~~---~l~~--~~i~lvGhS~Gg~ial~~a~~~------p~~v~~lVl~~p~~~~ 290 (468)
..+++ ++.. .+++|.|.|+||..+-.+|..- .-.++++.+-++...+
T Consensus 123 l~~~~~~~p~~~~~~~~~yi~GESY~G~y~p~~a~~i~~~n~~~inLkGi~IGNg~~dp 181 (421)
T 1cpy_A 123 LELFFDQFPEYVNKGQDFHIAGASYAGHYIPVFASEILSHKDRNFNLTSVLIGNGLTDP 181 (421)
T ss_dssp HHHHHHHCTTSTTTTCCEEEEEETTHHHHHHHHHHHHTTCSSCSSCCCEEEEESCCCCH
T ss_pred HHHHHHhCHHhcccCCCEEEEeecccccccHHHHHHHHhccccccceeeEEecCcccCh
Confidence 23333 2344 6899999999999887777542 1247888877776543
|
| >3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=98.57 E-value=2.3e-07 Score=88.92 Aligned_cols=35 Identities=17% Similarity=0.182 Sum_probs=32.1
Q ss_pred eEEEEEEcccHHHHHHHHHhCCCccceEEEecCCC
Q 012188 254 SFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPY 288 (468)
Q Consensus 254 ~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~ 288 (468)
...|+||||||+.++.++.++|+.+++++.++|..
T Consensus 138 ~r~i~G~S~GG~~al~~~~~~p~~F~~~~~~S~~~ 172 (331)
T 3gff_A 138 INVLVGHSFGGLVAMEALRTDRPLFSAYLALDTSL 172 (331)
T ss_dssp EEEEEEETHHHHHHHHHHHTTCSSCSEEEEESCCT
T ss_pred CeEEEEECHHHHHHHHHHHhCchhhheeeEeCchh
Confidence 34799999999999999999999999999999865
|
| >1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A | Back alignment and structure |
|---|
Probab=98.43 E-value=2.9e-07 Score=93.11 Aligned_cols=117 Identities=10% Similarity=0.069 Sum_probs=75.5
Q ss_pred CCCceeEEEecC-----CCCeEEEEecCCC---CccchhhhhhhccccCCC-cceEEEECCC----CCCCCCCCC---CC
Q 012188 168 DCDCKFCTCWSS-----SSRDTLFVKTQGP---SAFWTETLFPNFSSASKS-TYRLFAIDLL----GFGRSPKPT---DS 231 (468)
Q Consensus 168 d~~~~~~~~~~~-----~~p~vl~lHG~g~---s~~~~~~~~~~L~~~~~~-gy~Via~D~~----G~G~S~~~~---~~ 231 (468)
+.+|+.+..|.+ +.|+||++||++. +..........|+ ++ ++.|+.+|+| |++.+.... ..
T Consensus 79 ~edcL~l~v~~P~~~~~~~PviV~iHGGg~~~g~~~~~~~~~~~la---~~g~~vvv~~nYRlg~~Gf~~~~~~~~~~~~ 155 (489)
T 1qe3_A 79 SEDCLYVNVFAPDTPSQNLPVMVWIHGGAFYLGAGSEPLYDGSKLA---AQGEVIVVTLNYRLGPFGFLHLSSFDEAYSD 155 (489)
T ss_dssp CSCCCEEEEEEECSSCCSEEEEEEECCSTTTSCCTTSGGGCCHHHH---HHHTCEEEEECCCCHHHHSCCCTTTCTTSCS
T ss_pred CCCCCEEEEEeCCCCCCCCCEEEEECCCccccCCCCCcccCHHHHH---hcCCEEEEecCccCcccccCccccccccCCC
Confidence 445666666632 2378999999763 2222111233333 24 4999999999 676654321 12
Q ss_pred CCCHHHHHHHHHHHHhc---ccCC--ceEEEEEEcccHHHHHHHHHhC--CCccceEEEecCCC
Q 012188 232 LYTVREHLDMIEKSVIE---PNKV--KSFHIVAHSLGCILALALAVKH--PGSVKSLTLLAPPY 288 (468)
Q Consensus 232 ~~t~~~~~~di~~~l~~---~l~~--~~i~lvGhS~Gg~ial~~a~~~--p~~v~~lVl~~p~~ 288 (468)
...+.|....+ +.+.+ .++. +++.|+|||+||.++..++... ++.++++|+.++..
T Consensus 156 n~gl~D~~~al-~wv~~~i~~fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 218 (489)
T 1qe3_A 156 NLGLLDQAAAL-KWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGAS 218 (489)
T ss_dssp CHHHHHHHHHH-HHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCC
T ss_pred CcchHHHHHHH-HHHHHHHHHhCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCC
Confidence 33456665555 34443 3444 4899999999999998877653 57899999999866
|
| >2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A | Back alignment and structure |
|---|
Probab=98.41 E-value=3.4e-07 Score=92.79 Aligned_cols=118 Identities=14% Similarity=0.080 Sum_probs=78.4
Q ss_pred CCCceeEEEecC-----CCCeEEEEecCC---CCccchhhhhhhccccCCCc-ceEEEECCC----CCCCCCCCCC----
Q 012188 168 DCDCKFCTCWSS-----SSRDTLFVKTQG---PSAFWTETLFPNFSSASKST-YRLFAIDLL----GFGRSPKPTD---- 230 (468)
Q Consensus 168 d~~~~~~~~~~~-----~~p~vl~lHG~g---~s~~~~~~~~~~L~~~~~~g-y~Via~D~~----G~G~S~~~~~---- 230 (468)
+.+|+....|.+ +.|+||++||++ ++..........|+ +++ +.|+.+|+| ||+.+.....
T Consensus 81 ~edcl~l~v~~P~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~la---~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~~ 157 (498)
T 2ogt_A 81 SEDGLYLNIWSPAADGKKRPVLFWIHGGAFLFGSGSSPWYDGTAFA---KHGDVVVVTINYRMNVFGFLHLGDSFGEAYA 157 (498)
T ss_dssp BSCCCEEEEEESCSSSCCEEEEEEECCSTTTSCCTTCGGGCCHHHH---HHHTCEEEEECCCCHHHHCCCCTTTTCGGGT
T ss_pred CCCCcEEEEEecCCCCCCCcEEEEEcCCccCCCCCCCCcCCHHHHH---hCCCEEEEeCCCcCchhhccCchhhcccccc
Confidence 345566666633 247899999987 33332212233343 344 999999999 8888754221
Q ss_pred --CCCCHHHHHHHHHHHHhcc---cCC--ceEEEEEEcccHHHHHHHHHhC--CCccceEEEecCCCC
Q 012188 231 --SLYTVREHLDMIEKSVIEP---NKV--KSFHIVAHSLGCILALALAVKH--PGSVKSLTLLAPPYY 289 (468)
Q Consensus 231 --~~~t~~~~~~di~~~l~~~---l~~--~~i~lvGhS~Gg~ial~~a~~~--p~~v~~lVl~~p~~~ 289 (468)
..+.+.|....+ +.+.+. +|. +++.|+|+|.||.+++.++... +..++++|+.+++..
T Consensus 158 ~~~n~gl~D~~~al-~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~ 224 (498)
T 2ogt_A 158 QAGNLGILDQVAAL-RWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSGS 224 (498)
T ss_dssp TGGGHHHHHHHHHH-HHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred CCCCcccHHHHHHH-HHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCCcc
Confidence 123456666666 455443 443 5899999999999998887753 457999999998664
|
| >4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A* | Back alignment and structure |
|---|
Probab=98.20 E-value=3.2e-05 Score=72.72 Aligned_cols=37 Identities=24% Similarity=0.158 Sum_probs=31.0
Q ss_pred ceEEEEEEcccHHHHHHHHHhC--CCccceEEEecCCCC
Q 012188 253 KSFHIVAHSLGCILALALAVKH--PGSVKSLTLLAPPYY 289 (468)
Q Consensus 253 ~~i~lvGhS~Gg~ial~~a~~~--p~~v~~lVl~~p~~~ 289 (468)
++..|.||||||.-|+.+|.++ |+++.++...+|...
T Consensus 153 ~~~~i~G~SMGG~gAl~~al~~~~~~~~~~~~s~s~~~~ 191 (299)
T 4fol_A 153 DNVAITGISMGGYGAICGYLKGYSGKRYKSCSAFAPIVN 191 (299)
T ss_dssp SSEEEEEBTHHHHHHHHHHHHTGGGTCCSEEEEESCCCC
T ss_pred cceEEEecCchHHHHHHHHHhCCCCCceEEEEecccccC
Confidence 4689999999999999999986 667888888776654
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.17 E-value=8.1e-06 Score=92.62 Aligned_cols=92 Identities=16% Similarity=0.178 Sum_probs=60.5
Q ss_pred CCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceEEEE
Q 012188 179 SSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIV 258 (468)
Q Consensus 179 ~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i~lv 258 (468)
+..++++++|+.++....+..+...+ . .+.|++++.++.. .-...+++.+ .......++.++
T Consensus 1056 ~~~~~L~~l~~~~g~~~~y~~la~~L----~-~~~v~~l~~~~~~---------~~~~~~~~~i----~~~~~~gp~~l~ 1117 (1304)
T 2vsq_A 1056 DQEQIIFAFPPVLGYGLMYQNLSSRL----P-SYKLCAFDFIEEE---------DRLDRYADLI----QKLQPEGPLTLF 1117 (1304)
T ss_dssp TSCCEEECCCCTTCBGGGGHHHHTTC----C-SCEEEECBCCCST---------THHHHHHHHH----HHHCCSSCEEEE
T ss_pred ccCCcceeecccccchHHHHHHHhcc----c-ccceEeecccCHH---------HHHHHHHHHH----HHhCCCCCeEEE
Confidence 34568999999877665554444443 2 6899998874321 1122333332 222223589999
Q ss_pred EEcccHHHHHHHHHhC---CCccceEEEecCCC
Q 012188 259 AHSLGCILALALAVKH---PGSVKSLTLLAPPY 288 (468)
Q Consensus 259 GhS~Gg~ial~~a~~~---p~~v~~lVl~~p~~ 288 (468)
|||+||.+|..+|.+. ...+..++++++..
T Consensus 1118 G~S~Gg~lA~e~A~~L~~~g~~v~~l~lld~~~ 1150 (1304)
T 2vsq_A 1118 GYSAGCSLAFEAAKKLEEQGRIVQRIIMVDSYK 1150 (1304)
T ss_dssp EETTHHHHHHHHHHHHHHSSCCEEEEEEESCCE
T ss_pred EecCCchHHHHHHHHHHhCCCceeEEEEecCcc
Confidence 9999999999999764 35688999998653
|
| >2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} | Back alignment and structure |
|---|
Probab=98.12 E-value=3e-06 Score=86.99 Aligned_cols=104 Identities=12% Similarity=0.050 Sum_probs=69.0
Q ss_pred CCeEEEEecCCC---CccchhhhhhhccccCCCcceEEEECCCC----CCCCCCCC-CCCCCHHHHHHHHHHHHhcc---
Q 012188 181 SRDTLFVKTQGP---SAFWTETLFPNFSSASKSTYRLFAIDLLG----FGRSPKPT-DSLYTVREHLDMIEKSVIEP--- 249 (468)
Q Consensus 181 ~p~vl~lHG~g~---s~~~~~~~~~~L~~~~~~gy~Via~D~~G----~G~S~~~~-~~~~t~~~~~~di~~~l~~~--- 249 (468)
.|+||++||++. +..........|. +.|+.|+.+|+|. ++.+.... .....+.|....+ +.+.+.
T Consensus 115 ~Pviv~iHGGg~~~g~~~~~~~~~~~l~---~~g~vvv~~nYRl~~~Gf~~~~~~~~~~n~gl~D~~~al-~wv~~~i~~ 190 (551)
T 2fj0_A 115 LPVLVFIHGGGFAFGSGDSDLHGPEYLV---SKDVIVITFNYRLNVYGFLSLNSTSVPGNAGLRDMVTLL-KWVQRNAHF 190 (551)
T ss_dssp EEEEEEECCSTTTSCCSCTTTCBCTTGG---GGSCEEEEECCCCHHHHHCCCSSSSCCSCHHHHHHHHHH-HHHHHHTGG
T ss_pred CCEEEEEcCCccccCCCcccccCHHHHH---hCCeEEEEeCCcCCccccccCcccCCCCchhHHHHHHHH-HHHHHHHHH
Confidence 478999999763 2221111223333 4899999999994 33332211 1234567777666 455443
Q ss_pred cCC--ceEEEEEEcccHHHHHHHHHh--CCCccceEEEecCCC
Q 012188 250 NKV--KSFHIVAHSLGCILALALAVK--HPGSVKSLTLLAPPY 288 (468)
Q Consensus 250 l~~--~~i~lvGhS~Gg~ial~~a~~--~p~~v~~lVl~~p~~ 288 (468)
+|. +++.|+|+|.||.+++.++.. .++.++++|+.++..
T Consensus 191 fggDp~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 233 (551)
T 2fj0_A 191 FGGRPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGTS 233 (551)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCT
T ss_pred hCCChhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCCc
Confidence 554 579999999999999988766 456899999999764
|
| >2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... | Back alignment and structure |
|---|
Probab=98.08 E-value=4.1e-06 Score=85.83 Aligned_cols=117 Identities=13% Similarity=0.070 Sum_probs=73.6
Q ss_pred CCceeEEEecC----C--CCeEEEEecCCC---CccchhhhhhhccccCCCcceEEEECCC----CCCCCCC-CC-CCCC
Q 012188 169 CDCKFCTCWSS----S--SRDTLFVKTQGP---SAFWTETLFPNFSSASKSTYRLFAIDLL----GFGRSPK-PT-DSLY 233 (468)
Q Consensus 169 ~~~~~~~~~~~----~--~p~vl~lHG~g~---s~~~~~~~~~~L~~~~~~gy~Via~D~~----G~G~S~~-~~-~~~~ 233 (468)
-+|+....|.+ + .|+||++||++. +..........|+ .+.|+.|+.+|+| |++.+.. +. ....
T Consensus 94 edcl~l~v~~P~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~la--~~~g~vvv~~nYRlg~~Gf~~~~~~~~~~~n~ 171 (543)
T 2ha2_A 94 EDCLYLNVWTPYPRPASPTPVLIWIYGGGFYSGAASLDVYDGRFLA--QVEGAVLVSMNYRVGTFGFLALPGSREAPGNV 171 (543)
T ss_dssp SCCCEEEEEEESSCCSSCEEEEEEECCSTTTCCCTTSGGGCTHHHH--HHHCCEEEEECCCCHHHHHCCCTTCSSCCSCH
T ss_pred CcCCeEEEeecCCCCCCCCeEEEEECCCccccCCCCCCcCChHHHH--hcCCEEEEEecccccccccccCCCCCCCCCcc
Confidence 34555555522 1 378999999763 2221111223333 0258999999999 4555421 11 1234
Q ss_pred CHHHHHHHHHHHHhc---ccCC--ceEEEEEEcccHHHHHHHHHhC--CCccceEEEecCCC
Q 012188 234 TVREHLDMIEKSVIE---PNKV--KSFHIVAHSLGCILALALAVKH--PGSVKSLTLLAPPY 288 (468)
Q Consensus 234 t~~~~~~di~~~l~~---~l~~--~~i~lvGhS~Gg~ial~~a~~~--p~~v~~lVl~~p~~ 288 (468)
.+.|....+ +.+.+ .+|. +++.|+|+|.||.++..++... +..++++|+.++..
T Consensus 172 gl~D~~~al-~wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 172 GLLDQRLAL-QWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (543)
T ss_dssp HHHHHHHHH-HHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred cHHHHHHHH-HHHHHHHHHhCCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCCc
Confidence 566666666 45544 3454 5899999999999988777653 46899999999754
|
| >2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* | Back alignment and structure |
|---|
Probab=97.99 E-value=7.4e-06 Score=83.88 Aligned_cols=116 Identities=11% Similarity=0.080 Sum_probs=74.5
Q ss_pred CCceeEEEecC-------CCCeEEEEecCCC---CccchhhhhhhccccCCCcceEEEECCC----CCCCCCCCC-CCCC
Q 012188 169 CDCKFCTCWSS-------SSRDTLFVKTQGP---SAFWTETLFPNFSSASKSTYRLFAIDLL----GFGRSPKPT-DSLY 233 (468)
Q Consensus 169 ~~~~~~~~~~~-------~~p~vl~lHG~g~---s~~~~~~~~~~L~~~~~~gy~Via~D~~----G~G~S~~~~-~~~~ 233 (468)
.+|+.+..|.+ +.|+||++||++. +...+. ...|+ .+.|+.|+.+|+| |++.+.... ...+
T Consensus 96 edcl~lnv~~P~~~~~~~~~Pv~v~iHGG~~~~g~~~~~~--~~~la--~~~g~vvv~~nYRlg~~gf~~~~~~~~~~n~ 171 (542)
T 2h7c_A 96 EDCLYLNIYTPADLTKKNRLPVMVWIHGGGLMVGAASTYD--GLALA--AHENVVVVTIQYRLGIWGFFSTGDEHSRGNW 171 (542)
T ss_dssp SCCCEEEEEECSCTTSCCCEEEEEEECCSTTTSCCSTTSC--CHHHH--HHHTCEEEEECCCCHHHHHCCCSSTTCCCCH
T ss_pred CCCcEEEEEECCCCCCCCCCCEEEEECCCcccCCCccccC--HHHHH--hcCCEEEEecCCCCccccCCCCCcccCccch
Confidence 34555555522 2378999999764 221111 11222 1268999999999 565543221 1234
Q ss_pred CHHHHHHHHHHHHhc---ccCC--ceEEEEEEcccHHHHHHHHHh--CCCccceEEEecCCCC
Q 012188 234 TVREHLDMIEKSVIE---PNKV--KSFHIVAHSLGCILALALAVK--HPGSVKSLTLLAPPYY 289 (468)
Q Consensus 234 t~~~~~~di~~~l~~---~l~~--~~i~lvGhS~Gg~ial~~a~~--~p~~v~~lVl~~p~~~ 289 (468)
.+.|....+ +.+.+ .+|. +++.|+|+|.||.++..++.. .++.++++|+.++...
T Consensus 172 gl~D~~~al-~wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~~ 233 (542)
T 2h7c_A 172 GHLDQVAAL-RWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAL 233 (542)
T ss_dssp HHHHHHHHH-HHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred hHHHHHHHH-HHHHHHHHHcCCCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCcc
Confidence 566666666 45543 4454 589999999999999988876 3678999999997654
|
| >1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... | Back alignment and structure |
|---|
Probab=97.99 E-value=7.9e-06 Score=83.45 Aligned_cols=118 Identities=11% Similarity=0.084 Sum_probs=74.9
Q ss_pred CCceeEEEec-----CCCCeEEEEecCCC---CccchhhhhhhccccCCCcceEEEECCC----CCCCCCCCC--CCCCC
Q 012188 169 CDCKFCTCWS-----SSSRDTLFVKTQGP---SAFWTETLFPNFSSASKSTYRLFAIDLL----GFGRSPKPT--DSLYT 234 (468)
Q Consensus 169 ~~~~~~~~~~-----~~~p~vl~lHG~g~---s~~~~~~~~~~L~~~~~~gy~Via~D~~----G~G~S~~~~--~~~~t 234 (468)
-+|+....|. .+.|+||++||++. +..........|+ .+.|+.|+.+++| |++.++... .....
T Consensus 90 edcl~lnv~~P~~~~~~~Pv~v~iHGGg~~~g~~~~~~~~~~~la--~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~n~g 167 (529)
T 1p0i_A 90 EDCLYLNVWIPAPKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLA--RVERVIVVSMNYRVGALGFLALPGNPEAPGNMG 167 (529)
T ss_dssp SCCCEEEEEEESSCCSSEEEEEEECCSTTTSCCTTCGGGCTHHHH--HHHCCEEEEECCCCHHHHHCCCTTCTTSCSCHH
T ss_pred CcCCeEEEeeCCCCCCCCeEEEEECCCccccCCCCccccChHHHh--ccCCeEEEEecccccccccccCCCCCCCcCccc
Confidence 3455555552 23479999999763 2221111223333 0158999999999 555542111 12344
Q ss_pred HHHHHHHHHHHHhc---ccCC--ceEEEEEEcccHHHHHHHHHhC--CCccceEEEecCCCC
Q 012188 235 VREHLDMIEKSVIE---PNKV--KSFHIVAHSLGCILALALAVKH--PGSVKSLTLLAPPYY 289 (468)
Q Consensus 235 ~~~~~~di~~~l~~---~l~~--~~i~lvGhS~Gg~ial~~a~~~--p~~v~~lVl~~p~~~ 289 (468)
+.|....+ +.+.+ .+|. ++|.|+|+|.||.++..++... +..++++|+.++...
T Consensus 168 l~D~~~al-~wv~~~i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 228 (529)
T 1p0i_A 168 LFDQQLAL-QWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSFN 228 (529)
T ss_dssp HHHHHHHH-HHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCTT
T ss_pred HHHHHHHH-HHHHHHHHHhCCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCccc
Confidence 66776666 45544 4554 4799999999999998887764 457999999998653
|
| >4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A* | Back alignment and structure |
|---|
Probab=97.97 E-value=0.00011 Score=70.83 Aligned_cols=40 Identities=8% Similarity=-0.170 Sum_probs=33.8
Q ss_pred ccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCC
Q 012188 249 PNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYY 289 (468)
Q Consensus 249 ~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~ 289 (468)
..+.++|.++|||+||..++.+++..+ +|+.+|..++...
T Consensus 215 ~VD~~RIgv~G~S~gG~~Al~aaA~D~-Ri~~vi~~~sg~~ 254 (433)
T 4g4g_A 215 GIDTKRLGVTGCSRNGKGAFITGALVD-RIALTIPQESGAG 254 (433)
T ss_dssp CEEEEEEEEEEETHHHHHHHHHHHHCT-TCSEEEEESCCTT
T ss_pred CcChhHEEEEEeCCCcHHHHHHHhcCC-ceEEEEEecCCCC
Confidence 344579999999999999999999876 8999999886543
|
| >1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... | Back alignment and structure |
|---|
Probab=97.96 E-value=7.4e-06 Score=83.75 Aligned_cols=119 Identities=13% Similarity=0.054 Sum_probs=74.9
Q ss_pred CCCceeEEEecC-----CCCeEEEEecCCC---CccchhhhhhhccccCCCcceEEEECCC----CCCCCCCCC--CCCC
Q 012188 168 DCDCKFCTCWSS-----SSRDTLFVKTQGP---SAFWTETLFPNFSSASKSTYRLFAIDLL----GFGRSPKPT--DSLY 233 (468)
Q Consensus 168 d~~~~~~~~~~~-----~~p~vl~lHG~g~---s~~~~~~~~~~L~~~~~~gy~Via~D~~----G~G~S~~~~--~~~~ 233 (468)
+-+|+....|.+ +.|+||++||++. +..........|+ .+.|+.|+.+++| |++.++... ....
T Consensus 91 sedcl~lnv~~P~~~~~~~Pv~v~iHGG~~~~g~~~~~~~~~~~la--~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~n~ 168 (537)
T 1ea5_A 91 SEDCLYLNIWVPSPRPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLA--YTEEVVLVSLSYRVGAFGFLALHGSQEAPGNV 168 (537)
T ss_dssp CSCCCEEEEEECSSCCSSEEEEEEECCSTTTCCCTTCGGGCTHHHH--HHHTCEEEECCCCCHHHHHCCCTTCSSSCSCH
T ss_pred CCcCCeEEEeccCCCCCCCeEEEEECCCcccCCCCCCCccChHHHH--hcCCEEEEEeccCccccccccCCCCCCCcCcc
Confidence 345566655632 2478999999764 2211111122222 1369999999999 455442111 1234
Q ss_pred CHHHHHHHHHHHHhc---ccCC--ceEEEEEEcccHHHHHHHHHh--CCCccceEEEecCCCC
Q 012188 234 TVREHLDMIEKSVIE---PNKV--KSFHIVAHSLGCILALALAVK--HPGSVKSLTLLAPPYY 289 (468)
Q Consensus 234 t~~~~~~di~~~l~~---~l~~--~~i~lvGhS~Gg~ial~~a~~--~p~~v~~lVl~~p~~~ 289 (468)
.+.|....+ +.+.+ .+|. ++|.|+|+|.||.++..++.. .+..++++|+.++...
T Consensus 169 gl~D~~~al-~wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 230 (537)
T 1ea5_A 169 GLLDQRMAL-QWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPN 230 (537)
T ss_dssp HHHHHHHHH-HHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTT
T ss_pred ccHHHHHHH-HHHHHHHHHhCCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCcc
Confidence 567776666 45544 3454 589999999999999887765 2458999999998653
|
| >1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A* | Back alignment and structure |
|---|
Probab=97.95 E-value=6.8e-05 Score=68.08 Aligned_cols=111 Identities=13% Similarity=-0.031 Sum_probs=73.1
Q ss_pred CCCCeEEEEecCCCCccch-hhhh---hhcc-----------ccCCCcceEEEECC-CCCCCCCCCCCC---CCCHHHHH
Q 012188 179 SSSRDTLFVKTQGPSAFWT-ETLF---PNFS-----------SASKSTYRLFAIDL-LGFGRSPKPTDS---LYTVREHL 239 (468)
Q Consensus 179 ~~~p~vl~lHG~g~s~~~~-~~~~---~~L~-----------~~~~~gy~Via~D~-~G~G~S~~~~~~---~~t~~~~~ 239 (468)
.++|.+|+++|+|+++... ..+. |... ....+..+++.+|+ .|.|.|...... ..+.++.+
T Consensus 46 ~~~Pl~lwlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGtGfSy~~~~~~~~~~~~~~~a 125 (255)
T 1whs_A 46 QPAPLVLWLNGGPGCSSVAYGASEELGAFRVKPRGAGLVLNEYRWNKVANVLFLDSPAGVGFSYTNTSSDIYTSGDNRTA 125 (255)
T ss_dssp CSCCEEEEECCTTTBCTTTTHHHHTSSSEEECGGGCCEEECTTCGGGTSEEEEECCSTTSTTCEESSGGGGGSCCHHHHH
T ss_pred CCCCEEEEECCCCchHHHHHHHHhccCCeEecCCCCeeeeCcccccccCCEEEEecCCCCccCCCcCccccccCCHHHHH
Confidence 3478999999999865533 2221 1110 01114589999997 599999544321 24667777
Q ss_pred HHHHHHHh----c---ccCCceEEEEEEcccHHHHHHHHHhC------CCccceEEEecCCCCC
Q 012188 240 DMIEKSVI----E---PNKVKSFHIVAHSLGCILALALAVKH------PGSVKSLTLLAPPYYP 290 (468)
Q Consensus 240 ~di~~~l~----~---~l~~~~i~lvGhS~Gg~ial~~a~~~------p~~v~~lVl~~p~~~~ 290 (468)
+++. .++ + ++...+++|.|+|+||..+..+|..- .-.++++++.+|...+
T Consensus 126 ~~~~-~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inLkGi~ign~~~d~ 188 (255)
T 1whs_A 126 HDSY-AFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINLKGFMVGNGLIDD 188 (255)
T ss_dssp HHHH-HHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEEEEEEEEEECCBH
T ss_pred HHHH-HHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCcccccceEEecCCccCH
Confidence 7773 333 3 34557899999999999887777532 2468999999987643
|
| >1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.88 E-value=2.7e-05 Score=79.33 Aligned_cols=117 Identities=15% Similarity=0.094 Sum_probs=73.3
Q ss_pred CCceeEEEecC-------CCCeEEEEecCCCCc----cchhhhhhhccccCCCcceEEEECCC----CCCCCCCC---CC
Q 012188 169 CDCKFCTCWSS-------SSRDTLFVKTQGPSA----FWTETLFPNFSSASKSTYRLFAIDLL----GFGRSPKP---TD 230 (468)
Q Consensus 169 ~~~~~~~~~~~-------~~p~vl~lHG~g~s~----~~~~~~~~~L~~~~~~gy~Via~D~~----G~G~S~~~---~~ 230 (468)
-+|+....|.+ ..|+||++||++... .+.. ..+....+.|+.|+.+|+| |++.++.. ..
T Consensus 83 edcl~l~v~~P~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~---~~~~~~~~~g~vvv~~nYRlg~~Gf~~~~~~~~~~~ 159 (522)
T 1ukc_A 83 EDCLFINVFKPSTATSQSKLPVWLFIQGGGYAENSNANYNG---TQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNGD 159 (522)
T ss_dssp SCCCEEEEEEETTCCTTCCEEEEEEECCSTTTSCCSCSCCC---HHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHHSSC
T ss_pred CcCCEEEEEECCCCCCCCCCCEEEEECCCccccCCccccCc---HHHHHhcCCcEEEEEecccccccccccchhccccCC
Confidence 34566555522 237899999986421 1211 1121112369999999999 56655321 11
Q ss_pred CCCCHHHHHHHHHHHHhc---ccCC--ceEEEEEEcccHHHHHHHHHhC----CCccceEEEecCCCC
Q 012188 231 SLYTVREHLDMIEKSVIE---PNKV--KSFHIVAHSLGCILALALAVKH----PGSVKSLTLLAPPYY 289 (468)
Q Consensus 231 ~~~t~~~~~~di~~~l~~---~l~~--~~i~lvGhS~Gg~ial~~a~~~----p~~v~~lVl~~p~~~ 289 (468)
....+.|....+ +.+.+ .+|. +++.|+|+|.||..+..++... +..++++|+.++...
T Consensus 160 ~n~gl~D~~~al-~wv~~ni~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~~ 226 (522)
T 1ukc_A 160 LNAGLLDQRKAL-RWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWP 226 (522)
T ss_dssp TTHHHHHHHHHH-HHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCC
T ss_pred CChhHHHHHHHH-HHHHHHHHHcCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCcC
Confidence 234566666666 45544 4454 5899999999998777666543 568999999998653
|
| >3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=97.83 E-value=0.00035 Score=66.52 Aligned_cols=37 Identities=5% Similarity=-0.133 Sum_probs=32.2
Q ss_pred CCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCC
Q 012188 251 KVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPY 288 (468)
Q Consensus 251 ~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~ 288 (468)
+.++|.++|||+||..|+.+++..+ +|+.+|..++..
T Consensus 183 D~~RIgv~G~S~gG~~al~~aA~D~-Ri~~~v~~~~g~ 219 (375)
T 3pic_A 183 DTTKIGVTGCSRNGKGAMVAGAFEK-RIVLTLPQESGA 219 (375)
T ss_dssp EEEEEEEEEETHHHHHHHHHHHHCT-TEEEEEEESCCT
T ss_pred ChhhEEEEEeCCccHHHHHHHhcCC-ceEEEEeccCCC
Confidence 3369999999999999999999876 899999988654
|
| >1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.69 E-value=4.3e-05 Score=78.18 Aligned_cols=105 Identities=8% Similarity=-0.049 Sum_probs=65.7
Q ss_pred CCeEEEEecCCCCcc---ch--hhhhh-hccccCCCcceEEEECCCC----CCCCCC---CCCCCCCHHHHHHHHHHHHh
Q 012188 181 SRDTLFVKTQGPSAF---WT--ETLFP-NFSSASKSTYRLFAIDLLG----FGRSPK---PTDSLYTVREHLDMIEKSVI 247 (468)
Q Consensus 181 ~p~vl~lHG~g~s~~---~~--~~~~~-~L~~~~~~gy~Via~D~~G----~G~S~~---~~~~~~t~~~~~~di~~~l~ 247 (468)
.|+||++||++.... .+ ..+.. .++ .+.++.|+.+|+|. +..+.. .......+.|....+ +.+.
T Consensus 122 ~Pviv~iHGGg~~~g~~~~~~~~~l~~~~l~--~~~~~vvv~~nYRl~~~gf~~~~~~~~~~~~n~gl~D~~~Al-~wv~ 198 (544)
T 1thg_A 122 LPVMVWIYGGAFVYGSSAAYPGNSYVKESIN--MGQPVVFVSINYRTGPFGFLGGDAITAEGNTNAGLHDQRKGL-EWVS 198 (544)
T ss_dssp EEEEEEECCCTTCCSGGGGCCSHHHHHHHHH--TTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHH-HHHH
T ss_pred CcEEEEECCCccccCCccccCchHHHHHHhh--cCCCEEEEeCCCCCCcccCCCcccccccCCCchhHHHHHHHH-HHHH
Confidence 378999999875221 11 11111 121 12579999999995 222110 011224566777666 4554
Q ss_pred c---ccCC--ceEEEEEEcccHHHHHHHHHhC--------CCccceEEEecCCC
Q 012188 248 E---PNKV--KSFHIVAHSLGCILALALAVKH--------PGSVKSLTLLAPPY 288 (468)
Q Consensus 248 ~---~l~~--~~i~lvGhS~Gg~ial~~a~~~--------p~~v~~lVl~~p~~ 288 (468)
+ .+|. +++.|+|+|.||.++..++... +..++++|+.++..
T Consensus 199 ~ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~~ 252 (544)
T 1thg_A 199 DNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp HHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCC
T ss_pred HHHHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEecccc
Confidence 4 3454 5899999999999888777653 45799999999754
|
| >1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=4.9e-05 Score=77.59 Aligned_cols=118 Identities=9% Similarity=0.003 Sum_probs=71.7
Q ss_pred CCceeEEEecC-------CCCeEEEEecCCCC---ccch--hhhhh-hccccCCCcceEEEECCCC----CCCCCC---C
Q 012188 169 CDCKFCTCWSS-------SSRDTLFVKTQGPS---AFWT--ETLFP-NFSSASKSTYRLFAIDLLG----FGRSPK---P 228 (468)
Q Consensus 169 ~~~~~~~~~~~-------~~p~vl~lHG~g~s---~~~~--~~~~~-~L~~~~~~gy~Via~D~~G----~G~S~~---~ 228 (468)
-+|+....|.+ ..|+||++||++.. ...+ ..+.. .++ .+.++.|+.+|+|. +..+.. .
T Consensus 95 edcl~l~v~~P~~~~~~~~~Pv~v~iHGGg~~~g~~~~~~~~~l~~~~~~--~~~~~vvv~~nYRl~~~gf~~~~~~~~~ 172 (534)
T 1llf_A 95 EDCLTINVVRPPGTKAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVL--MGKPIIHVAVNYRVASWGFLAGDDIKAE 172 (534)
T ss_dssp SCCCEEEEEECTTCCTTCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHH--TTCCCEEEEECCCCHHHHHCCSHHHHHH
T ss_pred CCCeEEEEEECCCCCCCCCceEEEEEeCCCcccCCCcccCchHHHHHHHh--cCCCEEEEEeCCCCCCCCCCCccccccc
Confidence 35566655532 23789999998742 1111 11111 111 23689999999994 222110 0
Q ss_pred CCCCCCHHHHHHHHHHHHhc---ccCC--ceEEEEEEcccHHHHHHHHHhC--------CCccceEEEecCCCC
Q 012188 229 TDSLYTVREHLDMIEKSVIE---PNKV--KSFHIVAHSLGCILALALAVKH--------PGSVKSLTLLAPPYY 289 (468)
Q Consensus 229 ~~~~~t~~~~~~di~~~l~~---~l~~--~~i~lvGhS~Gg~ial~~a~~~--------p~~v~~lVl~~p~~~ 289 (468)
......+.|....+ +.+.+ .+|. +++.|+|+|.||..+..++... +..++++|+.++...
T Consensus 173 ~~~n~gl~D~~~Al-~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~~~ 245 (534)
T 1llf_A 173 GSGNAGLKDQRLGM-QWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAMV 245 (534)
T ss_dssp TCTTHHHHHHHHHH-HHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCCSC
T ss_pred CCCchhHHHHHHHH-HHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccCcc
Confidence 11234566777666 45544 4554 5899999999998777766553 567999999997543
|
| >1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* | Back alignment and structure |
|---|
Probab=97.67 E-value=6.1e-05 Score=77.76 Aligned_cols=105 Identities=11% Similarity=-0.006 Sum_probs=66.7
Q ss_pred CCeEEEEecCCC---CccchhhhhhhccccCCCcceEEEECCC----CCCCCC--------CCCCCCCCHHHHHHHHHHH
Q 012188 181 SRDTLFVKTQGP---SAFWTETLFPNFSSASKSTYRLFAIDLL----GFGRSP--------KPTDSLYTVREHLDMIEKS 245 (468)
Q Consensus 181 ~p~vl~lHG~g~---s~~~~~~~~~~L~~~~~~gy~Via~D~~----G~G~S~--------~~~~~~~t~~~~~~di~~~ 245 (468)
.|++|++||++. +..........|. .+.++.|+.+|+| |++... ......+.+.|....+ +.
T Consensus 141 ~PV~v~iHGGg~~~g~~~~~~~~~~~l~--~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~gl~D~~~al-~w 217 (585)
T 1dx4_A 141 LPILIWIYGGGFMTGSATLDIYNADIMA--AVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAI-RW 217 (585)
T ss_dssp EEEEEEECCSTTTCCCTTCGGGCCHHHH--HHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHH-HH
T ss_pred CCEEEEECCCcccCCCCCCCCCCchhhh--ccCCEEEEEecccccchhhcccccccccccCCCCCCcccHHHHHHHH-HH
Confidence 378999999764 2211111122333 0258999999999 444321 0111234566777666 45
Q ss_pred Hhcc---cCC--ceEEEEEEcccHHHHHHHHHhC--CCccceEEEecCCC
Q 012188 246 VIEP---NKV--KSFHIVAHSLGCILALALAVKH--PGSVKSLTLLAPPY 288 (468)
Q Consensus 246 l~~~---l~~--~~i~lvGhS~Gg~ial~~a~~~--p~~v~~lVl~~p~~ 288 (468)
+.+. +|. ++|.|+|+|.||..+..++... ...++++|+.++..
T Consensus 218 v~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 218 LKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 267 (585)
T ss_dssp HHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred HHHHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhcccc
Confidence 5443 454 5899999999999888776653 35799999998764
|
| >4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A* | Back alignment and structure |
|---|
Probab=97.66 E-value=9.4e-05 Score=74.17 Aligned_cols=80 Identities=19% Similarity=0.146 Sum_probs=64.1
Q ss_pred CcceEEEECCCCCCCCCCCC--------CCCCCHHHHHHHHHHHHhcc----cCC--ceEEEEEEcccHHHHHHHHHhCC
Q 012188 210 STYRLFAIDLLGFGRSPKPT--------DSLYTVREHLDMIEKSVIEP----NKV--KSFHIVAHSLGCILALALAVKHP 275 (468)
Q Consensus 210 ~gy~Via~D~~G~G~S~~~~--------~~~~t~~~~~~di~~~l~~~----l~~--~~i~lvGhS~Gg~ial~~a~~~p 275 (468)
-|--++.+++|-+|+|..-. -...+.++.++|+ +.+++. ++. .|++++|-|+||.+|..+-.+||
T Consensus 72 ~~a~~v~lEHRyYG~S~P~~~~st~~~nL~yLt~eQALaD~-a~fi~~~k~~~~~~~~pwI~~GGSY~G~LaAW~R~kYP 150 (472)
T 4ebb_A 72 RGALLVFAEHRYYGKSLPFGAQSTQRGHTELLTVEQALADF-AELLRALRRDLGAQDAPAIAFGGSYGGMLSAYLRMKYP 150 (472)
T ss_dssp HTCEEEEECCTTSTTCCTTGGGGGSTTSCTTCSHHHHHHHH-HHHHHHHHHHTTCTTCCEEEEEETHHHHHHHHHHHHCT
T ss_pred hCCeEEEEecccccCCcCCCCCCccccccccCCHHHHHHHH-HHHHHHHHhhcCCCCCCEEEEccCccchhhHHHHhhCC
Confidence 36789999999999995421 1346888888888 466553 332 48999999999999999999999
Q ss_pred CccceEEEecCCCCC
Q 012188 276 GSVKSLTLLAPPYYP 290 (468)
Q Consensus 276 ~~v~~lVl~~p~~~~ 290 (468)
+.|.+.+..++|...
T Consensus 151 ~lv~ga~ASSApv~a 165 (472)
T 4ebb_A 151 HLVAGALAASAPVLA 165 (472)
T ss_dssp TTCSEEEEETCCTTG
T ss_pred CeEEEEEecccceEE
Confidence 999999999987654
|
| >3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00015 Score=74.57 Aligned_cols=102 Identities=9% Similarity=0.057 Sum_probs=66.3
Q ss_pred CCeEEEEecCCCC---ccchhhhhhhccccCCCcceEEEECCC----CCCCCCCC-CCCCCCHHHHHHHHHHHHhc---c
Q 012188 181 SRDTLFVKTQGPS---AFWTETLFPNFSSASKSTYRLFAIDLL----GFGRSPKP-TDSLYTVREHLDMIEKSVIE---P 249 (468)
Q Consensus 181 ~p~vl~lHG~g~s---~~~~~~~~~~L~~~~~~gy~Via~D~~----G~G~S~~~-~~~~~t~~~~~~di~~~l~~---~ 249 (468)
.|+||++||++.. ...+. ...|+. +.++.|+.+|+| |+..+... ......+.|....+ +.+.+ .
T Consensus 131 ~Pv~v~iHGGg~~~g~~~~~~--~~~la~--~~~~vvv~~~YRl~~~Gfl~~~~~~~~~n~gl~D~~~al-~wv~~ni~~ 205 (574)
T 3bix_A 131 KPVMVYIHGGSYMEGTGNLYD--GSVLAS--YGNVIVITVNYRLGVLGFLSTGDQAAKGNYGLLDLIQAL-RWTSENIGF 205 (574)
T ss_dssp EEEEEECCCSSSSSCCGGGSC--CHHHHH--HHTCEEEEECCCCHHHHHCCCSSSSCCCCHHHHHHHHHH-HHHHHHGGG
T ss_pred CcEEEEECCCcccCCCCCccC--chhhhc--cCCEEEEEeCCcCcccccCcCCCCCCCCcccHHHHHHHH-HHHHHHHHH
Confidence 4789999998642 21111 122320 136999999999 44433211 11234567777777 45554 3
Q ss_pred cCC--ceEEEEEEcccHHHHHHHHHhCC---CccceEEEecCC
Q 012188 250 NKV--KSFHIVAHSLGCILALALAVKHP---GSVKSLTLLAPP 287 (468)
Q Consensus 250 l~~--~~i~lvGhS~Gg~ial~~a~~~p---~~v~~lVl~~p~ 287 (468)
+|. ++|.|+|+|.||.++..++.... ..++++|+.++.
T Consensus 206 fggdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg~ 248 (574)
T 3bix_A 206 FGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSGT 248 (574)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESCC
T ss_pred hCCCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcCC
Confidence 554 57999999999999988887654 468999998864
|
| >2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A | Back alignment and structure |
|---|
Probab=97.46 E-value=9.6e-05 Score=76.01 Aligned_cols=105 Identities=9% Similarity=-0.006 Sum_probs=65.7
Q ss_pred CCeEEEEecCCC---Cccch------hhhhhhccccCCCcceEEEECCC----CCCCCCCCC-CCCCCHHHHHHHHHHHH
Q 012188 181 SRDTLFVKTQGP---SAFWT------ETLFPNFSSASKSTYRLFAIDLL----GFGRSPKPT-DSLYTVREHLDMIEKSV 246 (468)
Q Consensus 181 ~p~vl~lHG~g~---s~~~~------~~~~~~L~~~~~~gy~Via~D~~----G~G~S~~~~-~~~~t~~~~~~di~~~l 246 (468)
.|+||++||++. +.... ......|+ .+.++.|+.+++| |++.+.... ...+.+.|....+ +.+
T Consensus 98 ~PV~v~iHGGg~~~Gs~~~~~~~~~~~~~~~~la--~~~~vvvV~~nYRLg~~Gfl~~~~~~~pgn~gl~D~~~Al-~wv 174 (579)
T 2bce_A 98 LPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIA--TRGNVIVVTFNYRVGPLGFLSTGDSNLPGNYGLWDQHMAI-AWV 174 (579)
T ss_dssp EEEEEECCCCSEEEC-------CTTGGGCCHHHH--HHHTCEEEEECCCCHHHHHCCCSSTTCCCCHHHHHHHHHH-HHH
T ss_pred CeEEEEECCCcccCCCCCccccccccccChHHHh--cCCCEEEEEeCCccccccCCcCCCCCCCCccchHHHHHHH-HHH
Confidence 378999999864 11100 00012222 1247999999999 554442111 1223467777766 455
Q ss_pred hc---ccCC--ceEEEEEEcccHHHHHHHHHh--CCCccceEEEecCCC
Q 012188 247 IE---PNKV--KSFHIVAHSLGCILALALAVK--HPGSVKSLTLLAPPY 288 (468)
Q Consensus 247 ~~---~l~~--~~i~lvGhS~Gg~ial~~a~~--~p~~v~~lVl~~p~~ 288 (468)
.+ .+|. +++.|+|+|.||.++..++.. ....+++.|+.++..
T Consensus 175 ~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~~ 223 (579)
T 2bce_A 175 KRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGVG 223 (579)
T ss_dssp HHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCCT
T ss_pred HHHHHHhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcCCc
Confidence 44 4554 489999999999999887764 346899999988643
|
| >1whs_B Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1wht_B* 1bcs_B* 1bcr_B* 3sc2_B* | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00069 Score=56.66 Aligned_cols=70 Identities=10% Similarity=0.138 Sum_probs=59.0
Q ss_pred chHHHhhccCCCcEEEEeeCCCCccChhhHHHHHHhCC------------------------CCeEEEecCCCccccccC
Q 012188 387 GYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIP------------------------RARVKVIEKKDHITIVVG 442 (468)
Q Consensus 387 ~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p------------------------~~~l~~i~~~gH~~~~~e 442 (468)
..+..++.+ .++|||.+|+.|.++|....+.+.+.+. +.++..+.++||++.. +
T Consensus 55 ~~~~~Ll~~-girvlIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~vaG~~~~~~~Ltf~~V~~AGHmVP~-d 132 (153)
T 1whs_B 55 PIYRELIAA-GLRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSVRGAGHEVPL-H 132 (153)
T ss_dssp HHHHHHHHT-TCEEEEEEETTCSSSCHHHHHHHHHTTTCCEEEEEEEEEETTEEEEEEEEETTEEEEEETTCCSSHHH-H
T ss_pred HHHHHHHhc-CceEEEEecCcCcccccHhHHHHHHhCCCCCcccccceeECCCccEEEEEeCeEEEEEECCCcccCcc-c
Confidence 344445443 7899999999999999988888888774 5678899999999997 9
Q ss_pred cHHHHHHHHHHHHhhc
Q 012188 443 RQKTFARELEEIWRSS 458 (468)
Q Consensus 443 ~p~~~~~~i~~fl~~~ 458 (468)
+|+...+.+..|+...
T Consensus 133 qP~~a~~m~~~fl~~~ 148 (153)
T 1whs_B 133 RPRQALVLFQYFLQGK 148 (153)
T ss_dssp SHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHCCC
Confidence 9999999999999864
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=97.38 E-value=2.4e-05 Score=93.05 Aligned_cols=96 Identities=16% Similarity=0.185 Sum_probs=0.0
Q ss_pred cCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceEEE
Q 012188 178 SSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHI 257 (468)
Q Consensus 178 ~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i~l 257 (468)
++.+++++++|+.+++...+..+...+. ..|+.+..||. . ...+++++++.....+.......++.+
T Consensus 2239 ~~~~~~Lfc~~~agG~~~~y~~l~~~l~------~~v~~lq~pg~----~---~~~~i~~la~~~~~~i~~~~p~gpy~L 2305 (2512)
T 2vz8_A 2239 QSAERPLFLVHPIEGSITVFHGLAAKLS------IPTYGLQCTGA----A---PLDSIQSLASYYIECIRQVQPEGPYRI 2305 (2512)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCCCeEEeCCccccHHHHHHHHHhhC------CcEEEEecCCC----C---CCCCHHHHHHHHHHHHHHhCCCCCEEE
Confidence 3345789999998876655544544432 68888888871 1 124677777766433333333468999
Q ss_pred EEEcccHHHHHHHHHhCCC---ccc---eEEEecC
Q 012188 258 VAHSLGCILALALAVKHPG---SVK---SLTLLAP 286 (468)
Q Consensus 258 vGhS~Gg~ial~~a~~~p~---~v~---~lVl~~p 286 (468)
+||||||.+|.++|.+... .+. .++++++
T Consensus 2306 ~G~S~Gg~lA~evA~~L~~~G~~v~~~~~L~llDg 2340 (2512)
T 2vz8_A 2306 AGYSYGACVAFEMCSQLQAQQSATPGNHSLFLFDG 2340 (2512)
T ss_dssp -----------------------------------
T ss_pred EEECHhHHHHHHHHHHHHHcCCCCCccceEEEEeC
Confidence 9999999999999976532 343 6777765
|
| >1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0021 Score=59.24 Aligned_cols=90 Identities=13% Similarity=0.092 Sum_probs=48.0
Q ss_pred EEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHH---HHHhccc
Q 012188 174 CTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIE---KSVIEPN 250 (468)
Q Consensus 174 ~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~---~~l~~~l 250 (468)
|..+......|++.+-++.+. .. + + .+..+...++||........+....+..+.+++. ..+++..
T Consensus 65 ~v~~~~~~~~ivv~frGT~~~--~d-w---~-----~d~~~~~~~~p~~~~~~vh~gf~~~~~~l~~~~~~~l~~~~~~~ 133 (269)
T 1tgl_A 65 MVARGDSEKTIYIVFRGSSSI--RN-W---I-----ADLTFVPVSYPPVSGTKVHKGFLDSYGEVQNELVATVLDQFKQY 133 (269)
T ss_pred EEEEECCCCEEEEEECCCCCH--HH-H---H-----hhCceEeeeCCCCCCCEEcHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 333344555666666555221 11 1 1 2556667777774111111111112334444442 2333333
Q ss_pred CCceEEEEEEcccHHHHHHHHHhC
Q 012188 251 KVKSFHIVAHSLGCILALALAVKH 274 (468)
Q Consensus 251 ~~~~i~lvGhS~Gg~ial~~a~~~ 274 (468)
...+++++||||||.+|..+|...
T Consensus 134 p~~~i~~~GHSLGgalA~l~a~~l 157 (269)
T 1tgl_A 134 PSYKVAVTGHSLGGATALLCALDL 157 (269)
T ss_pred CCceEEEEeeCHHHHHHHHHHHHH
Confidence 445799999999999999988776
|
| >4az3_B Lysosomal protective protein 20 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_B* | Back alignment and structure |
|---|
Probab=96.69 E-value=0.012 Score=49.05 Aligned_cols=63 Identities=8% Similarity=0.062 Sum_probs=52.2
Q ss_pred cCCCcEEEEeeCCCCccChhhHHHHHHhCC-----------------------------CCeEEEecCCCccccccCcHH
Q 012188 395 HVKCDVNVFHGEDDELIPVECSYNVQRKIP-----------------------------RARVKVIEKKDHITIVVGRQK 445 (468)
Q Consensus 395 ~i~~PvLii~G~~D~~vp~~~~~~l~~~~p-----------------------------~~~l~~i~~~gH~~~~~e~p~ 445 (468)
.-.++|||.+|+.|.+++.--.+.+.+.+. +.++..+.++||++.. ++|+
T Consensus 61 ~~girVliy~Gd~D~icn~~G~~~~i~~L~w~~~~~~~~w~~~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~-dqP~ 139 (155)
T 4az3_B 61 SQKYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPT-DKPL 139 (155)
T ss_dssp TCCCEEEEEEETTCSSSCHHHHHHHHHHTCCSSCCCCEEEEEEETTTEEEEEEEEEEETTEEEEEETTCCSCHHH-HCHH
T ss_pred HcCceEEEEecccCcccCcHhHHHHHHhcccccccccccceeecccCCCEEEEEEEEeCCEEEEEECCCcCcChh-hCHH
Confidence 337899999999999999888777766552 1246778899999997 9999
Q ss_pred HHHHHHHHHHhhc
Q 012188 446 TFARELEEIWRSS 458 (468)
Q Consensus 446 ~~~~~i~~fl~~~ 458 (468)
...+.+.+||...
T Consensus 140 ~al~m~~~fl~g~ 152 (155)
T 4az3_B 140 AAFTMFSRFLNKQ 152 (155)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCC
Confidence 9999999999764
|
| >1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=96.44 E-value=0.0035 Score=58.06 Aligned_cols=31 Identities=29% Similarity=0.342 Sum_probs=24.7
Q ss_pred HHhcccCCceEEEEEEcccHHHHHHHHHhCC
Q 012188 245 SVIEPNKVKSFHIVAHSLGCILALALAVKHP 275 (468)
Q Consensus 245 ~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p 275 (468)
.++++....+++++||||||.+|..++....
T Consensus 129 ~~~~~~p~~~i~vtGHSLGGalA~l~a~~l~ 159 (279)
T 1tia_A 129 EVVAQNPNYELVVVGHSLGAAVATLAATDLR 159 (279)
T ss_pred HHHHHCCCCeEEEEecCHHHHHHHHHHHHHH
Confidence 4444555568999999999999999988754
|
| >4az3_A Lysosomal protective protein 32 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_A* | Back alignment and structure |
|---|
Probab=96.42 E-value=0.037 Score=51.22 Aligned_cols=109 Identities=13% Similarity=0.016 Sum_probs=69.8
Q ss_pred CCCeEEEEecCCCCccchhhhhh---hccc-----------cCCCcceEEEECCC-CCCCCCCCCC-CCCCHHHHHHHHH
Q 012188 180 SSRDTLFVKTQGPSAFWTETLFP---NFSS-----------ASKSTYRLFAIDLL-GFGRSPKPTD-SLYTVREHLDMIE 243 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~~~~~~---~L~~-----------~~~~gy~Via~D~~-G~G~S~~~~~-~~~t~~~~~~di~ 243 (468)
+.|.+|.+.|+++.+.....+.+ .... ...+..+++.+|+| |.|.|..... ...+..+.++++.
T Consensus 49 ~~Pl~lWlnGGPGcSS~~g~~~E~GP~~~~~~~~~l~~N~~sW~~~an~lfiD~PvGtGfSy~~~~~~~~~~~~~a~d~~ 128 (300)
T 4az3_A 49 NSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAGVGFSYSDDKFYATNDTEVAQSNF 128 (300)
T ss_dssp TSCEEEEECCTTTBCTHHHHHHTTSSEEECTTSSCEEECTTCGGGSSEEEEECCSTTSTTCEETTCCCCCBHHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHhcCCCceecCCCccccccCccHHhhhcchhhcCCCcccccccCCCcccccchhhHHHHH
Confidence 46899999999986553332221 1110 00134689999977 8999954433 2345566666663
Q ss_pred HHHhc-------ccCCceEEEEEEcccHHHHHHHHHhC----CCccceEEEecCCCC
Q 012188 244 KSVIE-------PNKVKSFHIVAHSLGCILALALAVKH----PGSVKSLTLLAPPYY 289 (468)
Q Consensus 244 ~~l~~-------~l~~~~i~lvGhS~Gg~ial~~a~~~----p~~v~~lVl~~p~~~ 289 (468)
.+++ ++...+++|.|-|+||..+-.+|..- .-.++++++-++...
T Consensus 129 -~fl~~f~~~fp~~~~~~~yi~GESY~G~yvP~~a~~i~~~~~inLkG~~iGNg~~d 184 (300)
T 4az3_A 129 -EALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGLSS 184 (300)
T ss_dssp -HHHHHHHHHCGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCCSB
T ss_pred -HHHHHHHHhChhhcCCceEEEecCCceeeHHHHHHHHHhCCCcccccceecCCccC
Confidence 3332 34457899999999998888777542 225788888887654
|
| >1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A* | Back alignment and structure |
|---|
Probab=96.25 E-value=0.0059 Score=56.22 Aligned_cols=97 Identities=15% Similarity=0.145 Sum_probs=54.1
Q ss_pred CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEE-ECCCCCCCCCCCCCCCCCHHHHHHHHH---HHHhcccCCceE
Q 012188 180 SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFA-IDLLGFGRSPKPTDSLYTVREHLDMIE---KSVIEPNKVKSF 255 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via-~D~~G~G~S~~~~~~~~t~~~~~~di~---~~l~~~l~~~~i 255 (468)
.+..||.+||......|. . ..++.+.. .|+++.+ ....+.......+.+++. +.++++....++
T Consensus 73 ~~~iVva~RGT~~~~d~l-------~---d~~~~~~~~~~~~~~~--~vh~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~i 140 (269)
T 1tib_A 73 NKLIVLSFRGSRSIENWI-------G---NLNFDLKEINDICSGC--RGHDGFTSSWRSVADTLRQKVEDAVREHPDYRV 140 (269)
T ss_dssp TTEEEEEECCCSCTHHHH-------T---CCCCCEEECTTTSTTC--EEEHHHHHHHHHHHHHHHHHHHHHHHHCTTSEE
T ss_pred CCEEEEEEeCCCCHHHHH-------H---hcCeeeeecCCCCCCC--EecHHHHHHHHHHHHHHHHHHHHHHHHCCCceE
Confidence 355788899976433322 2 24566665 4665421 111110112333344442 334444555689
Q ss_pred EEEEEcccHHHHHHHHHhCCC---ccceEEEecCCC
Q 012188 256 HIVAHSLGCILALALAVKHPG---SVKSLTLLAPPY 288 (468)
Q Consensus 256 ~lvGhS~Gg~ial~~a~~~p~---~v~~lVl~~p~~ 288 (468)
+++||||||.+|..++..... .+..+++-+|..
T Consensus 141 ~l~GHSLGGalA~l~a~~l~~~~~~~~~~tfg~P~v 176 (269)
T 1tib_A 141 VFTGHSLGGALATVAGADLRGNGYDIDVFSYGAPRV 176 (269)
T ss_dssp EEEEETHHHHHHHHHHHHHTTSSSCEEEEEESCCCC
T ss_pred EEecCChHHHHHHHHHHHHHhcCCCeEEEEeCCCCC
Confidence 999999999999999988653 355555544443
|
| >1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=95.83 E-value=0.03 Score=51.10 Aligned_cols=110 Identities=13% Similarity=0.010 Sum_probs=64.5
Q ss_pred CCCeEEEEecCCCCccch-hhhh---hhccc-----------cCCCcceEEEECC-CCCCCCCCCCCC--CCCHHHHHHH
Q 012188 180 SSRDTLFVKTQGPSAFWT-ETLF---PNFSS-----------ASKSTYRLFAIDL-LGFGRSPKPTDS--LYTVREHLDM 241 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~-~~~~---~~L~~-----------~~~~gy~Via~D~-~G~G~S~~~~~~--~~t~~~~~~d 241 (468)
++|.+|+++|+|+++... ..+. |.... ...+..+++.+|. .|.|.|...... ..+-.+.+++
T Consensus 53 ~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~SW~~~anllfiDqPvGtGfSy~~~~~~~~~~d~~~a~d 132 (270)
T 1gxs_A 53 AAPLVLWLNGGPGCSSIGLGAMQELGAFRVHTNGESLLLNEYAWNKAANILFAESPAGVGFSYSNTSSDLSMGDDKMAQD 132 (270)
T ss_dssp GSCEEEEEECTTTBCTTTTHHHHTTSSEEECTTSSCEEECTTCGGGTSEEEEECCSTTSTTCEESSGGGGCCCHHHHHHH
T ss_pred CCCEEEEecCCCcccchhhhhHHhccCceecCCCCcceeCccchhccccEEEEeccccccccCCCCCccccCCcHHHHHH
Confidence 368999999999865542 2221 11110 0113478999995 599999543321 1233445555
Q ss_pred HH---HHHhc---ccCCceEEEEEEcccHHHHHHHHH---hC----CCccceEEEecCCCCC
Q 012188 242 IE---KSVIE---PNKVKSFHIVAHSLGCILALALAV---KH----PGSVKSLTLLAPPYYP 290 (468)
Q Consensus 242 i~---~~l~~---~l~~~~i~lvGhS~Gg~ial~~a~---~~----p~~v~~lVl~~p~~~~ 290 (468)
+. ..+++ ++...+++|.|.| |-++...+.. .. .-.++++++.++...+
T Consensus 133 ~~~fl~~f~~~fp~~~~~~~yi~GES-G~yvP~la~~i~~~n~~~~~inLkGi~ign~~~d~ 193 (270)
T 1gxs_A 133 TYTFLVKWFERFPHYNYREFYIAGES-GHFIPQLSQVVYRNRNNSPFINFQGLLVSSGLTND 193 (270)
T ss_dssp HHHHHHHHHHHCGGGTTSEEEEEEEC-TTHHHHHHHHHHHTTTTCTTCEEEEEEEESCCCBH
T ss_pred HHHHHHHHHHhChhhcCCCEEEEeCC-CcchHHHHHHHHhccccccceeeeeEEEeCCccCh
Confidence 52 23333 3555689999999 6655443322 21 1357899999887643
|
| >1gxs_B P-(S)-hydroxymandelonitrIle lyase chain B; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=95.78 E-value=0.042 Score=45.89 Aligned_cols=70 Identities=13% Similarity=0.188 Sum_probs=55.9
Q ss_pred chHHHhhccCCCcEEEEeeCCCCccChhhHHHHHHhCC------------C---------------CeEEEecCCCcccc
Q 012188 387 GYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIP------------R---------------ARVKVIEKKDHITI 439 (468)
Q Consensus 387 ~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p------------~---------------~~l~~i~~~gH~~~ 439 (468)
..+..++.+ .++|||.+|+.|.++|.-..+.+.+.+. + .++..+.++||++.
T Consensus 57 ~~~~~Ll~~-girVliysGd~D~i~~~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP 135 (158)
T 1gxs_B 57 PVYRELIQA-GLRVWVYSGDTDSVVPVSSTRRSLAALELPVKTSWYPWYMAPTEREVGGWSVQYEGLTYVTVRGAGHLVP 135 (158)
T ss_dssp HHHHHHHHT-TCEEEEEEETTCSSSCHHHHHHHHHTTCCCEEEEEEEEESSTTCCSEEEEEEEETTEEEEEETTCCSSHH
T ss_pred HHHHHHHHc-CCeEEEEecccCccCCcHHHHHHHHHCCCcccCCccceEECCCCCcccceEEEeCCEEEEEECCCcccCc
Confidence 344555553 7899999999999999888777766552 1 24677899999999
Q ss_pred ccCcHHHHHHHHHHHHhhc
Q 012188 440 VVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 440 ~~e~p~~~~~~i~~fl~~~ 458 (468)
. ++|+...+.+..|+...
T Consensus 136 ~-dqP~~al~m~~~fl~g~ 153 (158)
T 1gxs_B 136 V-HRPAQAFLLFKQFLKGE 153 (158)
T ss_dssp H-HCHHHHHHHHHHHHHTC
T ss_pred c-cCcHHHHHHHHHHHcCC
Confidence 7 99999999999999864
|
| >1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A {Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A | Back alignment and structure |
|---|
Probab=95.46 E-value=0.02 Score=52.63 Aligned_cols=31 Identities=19% Similarity=0.243 Sum_probs=24.7
Q ss_pred HHHhcccCCceEEEEEEcccHHHHHHHHHhC
Q 012188 244 KSVIEPNKVKSFHIVAHSLGCILALALAVKH 274 (468)
Q Consensus 244 ~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~ 274 (468)
+.+++.....++++.||||||.+|..++...
T Consensus 128 ~~~~~~~~~~~i~vtGHSLGGalA~l~a~~~ 158 (269)
T 1lgy_A 128 QEQLTAHPTYKVIVTGHSLGGAQALLAGMDL 158 (269)
T ss_dssp HHHHHHCTTCEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCeEEEeccChHHHHHHHHHHHH
Confidence 3444555557999999999999999988765
|
| >1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A* | Back alignment and structure |
|---|
Probab=94.78 E-value=0.035 Score=50.74 Aligned_cols=43 Identities=23% Similarity=0.308 Sum_probs=30.1
Q ss_pred HHHhcccCCceEEEEEEcccHHHHHHHHHhCC---CccceEEEecCC
Q 012188 244 KSVIEPNKVKSFHIVAHSLGCILALALAVKHP---GSVKSLTLLAPP 287 (468)
Q Consensus 244 ~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p---~~v~~lVl~~p~ 287 (468)
..+++.....++.+.|||+||.+|..++.... ..+. ++..++|
T Consensus 116 ~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l~~~~~~v~-~~tFg~P 161 (261)
T 1uwc_A 116 KQQASQYPDYALTVTGHSLGASMAALTAAQLSATYDNVR-LYTFGEP 161 (261)
T ss_dssp HHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHTTCSSEE-EEEESCC
T ss_pred HHHHHHCCCceEEEEecCHHHHHHHHHHHHHhccCCCeE-EEEecCC
Confidence 34555566678999999999999998887632 3465 4444444
|
| >3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum} | Back alignment and structure |
|---|
Probab=94.72 E-value=0.062 Score=48.87 Aligned_cols=30 Identities=30% Similarity=0.315 Sum_probs=24.0
Q ss_pred HHHhcccCCceEEEEEEcccHHHHHHHHHh
Q 012188 244 KSVIEPNKVKSFHIVAHSLGCILALALAVK 273 (468)
Q Consensus 244 ~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~ 273 (468)
+.+++..+..++.+.|||+||.+|..++..
T Consensus 115 ~~~~~~~p~~~i~vtGHSLGGalA~l~a~~ 144 (258)
T 3g7n_A 115 KALIAKYPDYTLEAVGHSLGGALTSIAHVA 144 (258)
T ss_dssp HHHHHHSTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHhCCCCeEEEeccCHHHHHHHHHHHH
Confidence 355556666799999999999999887764
|
| >3hc7_A Gene 12 protein, GP12; alpha/beta sandwich, cell adhesion; 2.00A {Mycobacterium phage D29} | Back alignment and structure |
|---|
Probab=94.68 E-value=0.067 Score=48.22 Aligned_cols=106 Identities=14% Similarity=0.127 Sum_probs=59.6
Q ss_pred CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEE-CCCCCCCCCCCCCCCCCHHHHHHHHH---HHHhcccCCceE
Q 012188 180 SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAI-DLLGFGRSPKPTDSLYTVREHLDMIE---KSVIEPNKVKSF 255 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~-D~~G~G~S~~~~~~~~t~~~~~~di~---~~l~~~l~~~~i 255 (468)
++|.|++.+|.+....--.-+...+.+.++..+..=-+ ++|-... +. ..+..+=++++. .....+-...++
T Consensus 2 ~~p~ii~ARGT~e~~~~GpG~~~~la~~l~~~~~~q~Vg~YpA~~~---~y--~~S~~~G~~~~~~~i~~~~~~CP~tki 76 (254)
T 3hc7_A 2 SKPWLFTVHGTGQPDPLGPGLPADTARDVLDIYRWQPIGNYPAAAF---PM--WPSVEKGVAELILQIELKLDADPYADF 76 (254)
T ss_dssp CCCEEEEECCTTCCCTTSSSHHHHHHTTSTTTSEEEECCSCCCCSS---SC--HHHHHHHHHHHHHHHHHHHHHCTTCCE
T ss_pred CCCEEEEECCCCCCCCCCCCcHHHHHHHHHHhcCCCccccccCccc---Cc--cchHHHHHHHHHHHHHHHHhhCCCCeE
Confidence 57899999997653210001122333333355554444 3554221 10 012233333331 233334455799
Q ss_pred EEEEEcccHHHHHHHHHh-----------CCCccceEEEecCCCCC
Q 012188 256 HIVAHSLGCILALALAVK-----------HPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 256 ~lvGhS~Gg~ial~~a~~-----------~p~~v~~lVl~~p~~~~ 290 (468)
+|.|+|.|+.++-.++.. ..++|.++++++-|...
T Consensus 77 VL~GYSQGA~V~~~~l~~~i~~~~g~~~~~~~~V~avvlfGdP~r~ 122 (254)
T 3hc7_A 77 AMAGYSQGAIVVGQVLKHHILPPTGRLHRFLHRLKKVIFWGNPMRQ 122 (254)
T ss_dssp EEEEETHHHHHHHHHHHHHTSSTTCTTGGGGGGEEEEEEESCTTCC
T ss_pred EEEeeCchHHHHHHHHHhhccCCCCCchhhhhhEEEEEEEeCCCCC
Confidence 999999999999887655 23579999999866544
|
| >3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A* | Back alignment and structure |
|---|
Probab=94.21 E-value=0.077 Score=48.88 Aligned_cols=44 Identities=25% Similarity=0.388 Sum_probs=30.7
Q ss_pred HHHhcccCCceEEEEEEcccHHHHHHHHHh----CCCccceEEEecCC
Q 012188 244 KSVIEPNKVKSFHIVAHSLGCILALALAVK----HPGSVKSLTLLAPP 287 (468)
Q Consensus 244 ~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~----~p~~v~~lVl~~p~ 287 (468)
..+++.....++.+.|||+||.+|..+|.. .|.....++..++|
T Consensus 129 ~~~~~~~p~~~l~vtGHSLGGalA~l~a~~l~~~~~~~~~~~~tfg~P 176 (279)
T 3uue_A 129 KKYKKEKNEKRVTVIGHSLGAAMGLLCAMDIELRMDGGLYKTYLFGLP 176 (279)
T ss_dssp HHHHHHHTCCCEEEEEETHHHHHHHHHHHHHHHHSTTCCSEEEEESCC
T ss_pred HHHHHhCCCceEEEcccCHHHHHHHHHHHHHHHhCCCCceEEEEecCC
Confidence 345555566789999999999999988764 34444455555544
|
| >3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae} | Back alignment and structure |
|---|
Probab=93.76 E-value=0.064 Score=50.31 Aligned_cols=30 Identities=23% Similarity=0.180 Sum_probs=23.9
Q ss_pred HHHhcccCCceEEEEEEcccHHHHHHHHHh
Q 012188 244 KSVIEPNKVKSFHIVAHSLGCILALALAVK 273 (468)
Q Consensus 244 ~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~ 273 (468)
..+++..+..++.+.|||+||.+|..++..
T Consensus 127 ~~~~~~~p~~~i~vtGHSLGGAlA~L~a~~ 156 (319)
T 3ngm_A 127 AKARKANPSFKVVSVGHSLGGAVATLAGAN 156 (319)
T ss_dssp HHHHHSSTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHhhCCCCceEEeecCHHHHHHHHHHHH
Confidence 345555566799999999999999987765
|
| >3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=93.36 E-value=0.08 Score=49.34 Aligned_cols=31 Identities=32% Similarity=0.378 Sum_probs=24.8
Q ss_pred HHHhcccCCceEEEEEEcccHHHHHHHHHhC
Q 012188 244 KSVIEPNKVKSFHIVAHSLGCILALALAVKH 274 (468)
Q Consensus 244 ~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~ 274 (468)
..+++.....++.+.|||+||.+|..+|...
T Consensus 145 ~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l 175 (301)
T 3o0d_A 145 DSVIEQYPDYQIAVTGHSLGGAAALLFGINL 175 (301)
T ss_dssp HHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHCCCceEEEeccChHHHHHHHHHHHH
Confidence 4555566667999999999999999888753
|
| >3qpd_A Cutinase 1; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted, phosphorylated Ser residue; HET: SEP; 1.57A {Aspergillus oryzae} PDB: 3gbs_A | Back alignment and structure |
|---|
Probab=90.30 E-value=1.1 Score=38.28 Aligned_cols=89 Identities=9% Similarity=0.025 Sum_probs=54.2
Q ss_pred hhhhccccCCCcceEEEEC--CCCCCCCC-CCCCCC-CCHHHHHHHHHHHHhcccCCceEEEEEEcccHHHHHHHHHhCC
Q 012188 200 LFPNFSSASKSTYRLFAID--LLGFGRSP-KPTDSL-YTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHP 275 (468)
Q Consensus 200 ~~~~L~~~~~~gy~Via~D--~~G~G~S~-~~~~~~-~t~~~~~~di~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p 275 (468)
+...|...+.....|..++ +|-.-... ...... ....+....+ ....++-...+++|+|+|.|+.++-.++...|
T Consensus 37 ~~~~L~~~~~~~v~v~~V~~~YpA~~~~~~~~~~s~~~g~~~~~~~i-~~~~~~CP~tkivl~GYSQGA~V~~~~~~~l~ 115 (187)
T 3qpd_A 37 VCNRLKLARSGDVACQGVGPRYTADLPSNALPEGTSQAAIAEAQGLF-EQAVSKCPDTQIVAGGYSQGTAVMNGAIKRLS 115 (187)
T ss_dssp HHHHHHHHSTTCEEEEECCSSCCCCGGGGGSTTSSCHHHHHHHHHHH-HHHHHHCTTCEEEEEEETHHHHHHHHHHTTSC
T ss_pred HHHHHHHHcCCCceEEeeCCcccCcCccccccccchhHHHHHHHHHH-HHHHHhCCCCcEEEEeeccccHHHHhhhhcCC
Confidence 4444544443567889998 87532100 000000 0122333333 34455666689999999999999988776655
Q ss_pred ----CccceEEEecCCCC
Q 012188 276 ----GSVKSLTLLAPPYY 289 (468)
Q Consensus 276 ----~~v~~lVl~~p~~~ 289 (468)
++|.++++++-|..
T Consensus 116 ~~~~~~V~avvlfGdP~~ 133 (187)
T 3qpd_A 116 ADVQDKIKGVVLFGYTRN 133 (187)
T ss_dssp HHHHHHEEEEEEESCTTT
T ss_pred HhhhhhEEEEEEeeCCcc
Confidence 57999999986553
|
| >3qpa_A Cutinase; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted; HET: MIR; 0.85A {Nectria haematococca} PDB: 3qpc_A* 1cex_A 1oxm_A* 1cui_A 1cus_A 2cut_A 1cuj_A 1cuy_A 1xzl_A* 1xzk_A* 1xzm_A* 1cuh_A 1cuu_A 3esc_A* 1cua_A* 3esa_A* 3esb_A* 3ef3_A* 3esd_A* 1cux_A ... | Back alignment and structure |
|---|
Probab=90.25 E-value=0.79 Score=39.44 Aligned_cols=79 Identities=13% Similarity=0.045 Sum_probs=51.8
Q ss_pred CcceEEEE--CCCCCCCCCC-CCC-CCCCHHHHHHHHHHHHhcccCCceEEEEEEcccHHHHHHHHHhCC----CccceE
Q 012188 210 STYRLFAI--DLLGFGRSPK-PTD-SLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHP----GSVKSL 281 (468)
Q Consensus 210 ~gy~Via~--D~~G~G~S~~-~~~-~~~t~~~~~~di~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p----~~v~~l 281 (468)
+...|..+ ++|-.-.... ... ......++...| .....+-...+++|+|+|.|+.++-.++...| ++|.++
T Consensus 51 ~~v~v~~V~~~YpA~~~~~~~~~~S~~~G~~~~~~~i-~~~~~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~av 129 (197)
T 3qpa_A 51 DGVWIQGVGGAYRATLGDNALPRGTSSAAIREMLGLF-QQANTKCPDATLIAGGYXQGAALAAASIEDLDSAIRDKIAGT 129 (197)
T ss_dssp TTEEEEECCTTCCCCGGGGGSTTSSCHHHHHHHHHHH-HHHHHHCTTCEEEEEEETHHHHHHHHHHHHSCHHHHTTEEEE
T ss_pred CceEEEeeCCCCcCCCCcccCccccHHHHHHHHHHHH-HHHHHhCCCCcEEEEecccccHHHHHHHhcCCHhHHhheEEE
Confidence 45778888 7875321100 000 011234455555 45556667789999999999999988777665 689999
Q ss_pred EEecCCCC
Q 012188 282 TLLAPPYY 289 (468)
Q Consensus 282 Vl~~p~~~ 289 (468)
++++-|..
T Consensus 130 vlfGdP~~ 137 (197)
T 3qpa_A 130 VLFGYTKN 137 (197)
T ss_dssp EEESCTTT
T ss_pred EEeeCCcc
Confidence 99986653
|
| >3dcn_A Cutinase, cutin hydrolase; catalytic triad, secreted, serine esterase; 1.90A {Glomerella cingulata} SCOP: c.69.1.0 PDB: 3dd5_A 3dea_A* | Back alignment and structure |
|---|
Probab=86.57 E-value=1.1 Score=38.70 Aligned_cols=106 Identities=9% Similarity=-0.012 Sum_probs=61.2
Q ss_pred eEEEEecCCCCcc----chhhhhhhccccC-CCcceEEEE--CCCCCCCCC-CCCC-CCCCHHHHHHHHHHHHhcccCCc
Q 012188 183 DTLFVKTQGPSAF----WTETLFPNFSSAS-KSTYRLFAI--DLLGFGRSP-KPTD-SLYTVREHLDMIEKSVIEPNKVK 253 (468)
Q Consensus 183 ~vl~lHG~g~s~~----~~~~~~~~L~~~~-~~gy~Via~--D~~G~G~S~-~~~~-~~~t~~~~~~di~~~l~~~l~~~ 253 (468)
.|||.-|.+.... .-..+...|...+ .+...|..+ ++|-.-... .+.. ...-..++...| .....+-...
T Consensus 27 ~vi~ARGT~E~~g~G~~~G~~~~~~L~~~~g~~~v~v~~V~~~YpA~~~~~~~~~~S~~~G~~~~~~~i-~~~~~~CP~t 105 (201)
T 3dcn_A 27 IYIFARASTEPGNMGISAGPIVADALERIYGANDVWVQGVGGPYLADLASNFLPDGTSSAAINEARRLF-TLANTKCPNA 105 (201)
T ss_dssp EEEEECCTTCCTTTCSSHHHHHHHHHHHHHCGGGEEEEECCTTCCCCSGGGGSTTSSCHHHHHHHHHHH-HHHHHHCTTS
T ss_pred EEEEecCCCCCCCCCccccHHHHHHHHHhcCCCceEEEEeCCCccccCCcccccCCCHHHHHHHHHHHH-HHHHHhCCCC
Confidence 4566666433221 1122444444322 145678888 677532110 0000 011234455555 4555666678
Q ss_pred eEEEEEEcccHHHHHHHHHhCC----CccceEEEecCCCC
Q 012188 254 SFHIVAHSLGCILALALAVKHP----GSVKSLTLLAPPYY 289 (468)
Q Consensus 254 ~i~lvGhS~Gg~ial~~a~~~p----~~v~~lVl~~p~~~ 289 (468)
+++|+|+|.|+.++-.++...| ++|.++++++-|..
T Consensus 106 kiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP~~ 145 (201)
T 3dcn_A 106 AIVSGGYSQGTAVMAGSISGLSTTIKNQIKGVVLFGYTKN 145 (201)
T ss_dssp EEEEEEETHHHHHHHHHHTTSCHHHHHHEEEEEEETCTTT
T ss_pred cEEEEeecchhHHHHHHHhcCChhhhhheEEEEEeeCccc
Confidence 9999999999999988776655 57899999986653
|
| >2ory_A Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Photobacterium SP} | Back alignment and structure |
|---|
Probab=86.39 E-value=0.58 Score=44.37 Aligned_cols=23 Identities=26% Similarity=0.268 Sum_probs=19.8
Q ss_pred CCceEEEEEEcccHHHHHHHHHh
Q 012188 251 KVKSFHIVAHSLGCILALALAVK 273 (468)
Q Consensus 251 ~~~~i~lvGhS~Gg~ial~~a~~ 273 (468)
+..++++.|||+||.+|..+|..
T Consensus 164 ~~~~i~vtGHSLGGAlA~l~a~~ 186 (346)
T 2ory_A 164 GKAKICVTGHSKGGALSSTLALW 186 (346)
T ss_dssp CCEEEEEEEETHHHHHHHHHHHH
T ss_pred CCceEEEecCChHHHHHHHHHHH
Confidence 34689999999999999988865
|
| >1g66_A Acetyl xylan esterase II; serine hydrolase, acetyl xylopyranose, hydrolase; 0.90A {Penicillium purpurogenum} SCOP: c.69.1.30 PDB: 1bs9_A 2axe_A* | Back alignment and structure |
|---|
Probab=86.32 E-value=1.2 Score=38.81 Aligned_cols=106 Identities=16% Similarity=0.128 Sum_probs=58.0
Q ss_pred eEEEEecCCCCcc--chhhhhhhccccCCCcceEEEECCCCC-CCCCCCCCCCC--CHHHHHHHHH---HHHhcccCCce
Q 012188 183 DTLFVKTQGPSAF--WTETLFPNFSSASKSTYRLFAIDLLGF-GRSPKPTDSLY--TVREHLDMIE---KSVIEPNKVKS 254 (468)
Q Consensus 183 ~vl~lHG~g~s~~--~~~~~~~~L~~~~~~gy~Via~D~~G~-G~S~~~~~~~~--t~~~~~~di~---~~l~~~l~~~~ 254 (468)
.||+..|.+.... ....+...|...+ .+-++..+++|-. |.+... ...| +..+=++++. ....++-...+
T Consensus 6 ~vi~aRGT~E~~g~G~~g~~~~~l~~~~-~g~~~~~V~YpA~~~~~~~~-~~~y~~S~~~G~~~~~~~i~~~~~~CP~tk 83 (207)
T 1g66_A 6 HVFGARETTASPGYGSSSTVVNGVLSAY-PGSTAEAINYPACGGQSSCG-GASYSSSVAQGIAAVASAVNSFNSQCPSTK 83 (207)
T ss_dssp EEEEECCTTCCSSCGGGHHHHHHHHHHS-TTCEEEECCCCCCSSCGGGT-SCCHHHHHHHHHHHHHHHHHHHHHHSTTCE
T ss_pred EEEEEeCCCCCCCCCcccHHHHHHHHhC-CCCceEEeeccccccccccC-CcchhhhHHHHHHHHHHHHHHHHHhCCCCc
Confidence 3566666543211 1123444444333 2446888888863 222110 0112 2222223331 23444556679
Q ss_pred EEEEEEcccHHHHHHHHH--------------hCC----CccceEEEecCCCCC
Q 012188 255 FHIVAHSLGCILALALAV--------------KHP----GSVKSLTLLAPPYYP 290 (468)
Q Consensus 255 i~lvGhS~Gg~ial~~a~--------------~~p----~~v~~lVl~~p~~~~ 290 (468)
++|+|+|.|+.++-.+.. ..| ++|.++++++-+...
T Consensus 84 ivl~GYSQGA~V~~~~~~~~~~~~~~i~~~~~~l~~~~~~~V~avvlfGdP~~~ 137 (207)
T 1g66_A 84 IVLVGYSQGGEIMDVALCGGGDPNQGYTNTAVQLSSSAVNMVKAAIFMGDPMFR 137 (207)
T ss_dssp EEEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCTTCB
T ss_pred EEEEeeCchHHHHHHHHhcccccccccccCCCCCChhhhccEEEEEEEcCCCcc
Confidence 999999999999888764 122 468899998866543
|
| >1qoz_A AXE, acetyl xylan esterase; hydrolase, xylan degradation; HET: NAG; 1.90A {Trichoderma reesei} SCOP: c.69.1.30 | Back alignment and structure |
|---|
Probab=84.98 E-value=1.5 Score=38.14 Aligned_cols=105 Identities=14% Similarity=0.042 Sum_probs=58.2
Q ss_pred eEEEEecCCCCcc--chhhhhhhccccCCCcceEEEECCCCC-CCCCCCCCCCC--CH----HHHHHHHHHHHhcccCCc
Q 012188 183 DTLFVKTQGPSAF--WTETLFPNFSSASKSTYRLFAIDLLGF-GRSPKPTDSLY--TV----REHLDMIEKSVIEPNKVK 253 (468)
Q Consensus 183 ~vl~lHG~g~s~~--~~~~~~~~L~~~~~~gy~Via~D~~G~-G~S~~~~~~~~--t~----~~~~~di~~~l~~~l~~~ 253 (468)
.||+..|.+.... ....+...|.+.+ .+-++..+++|-. |.+.. ....| +. .++.+.| .....+-...
T Consensus 6 ~vi~aRGT~E~~g~G~~g~~~~~l~~~~-~g~~~~~V~YpA~~~~~~~-~~~~y~~S~~~G~~~~~~~i-~~~~~~CP~t 82 (207)
T 1qoz_A 6 HVFGARETTVSQGYGSSATVVNLVIQAH-PGTTSEAIVYPACGGQASC-GGISYANSVVNGTNAAAAAI-NNFHNSCPDT 82 (207)
T ss_dssp EEEEECCTTCCSSCGGGHHHHHHHHHHS-TTEEEEECCSCCCSSCGGG-TTCCHHHHHHHHHHHHHHHH-HHHHHHCTTS
T ss_pred EEEEEecCCCCCCCCcchHHHHHHHHhc-CCCceEEeecccccccccc-CCccccccHHHHHHHHHHHH-HHHHhhCCCC
Confidence 4566666544321 1123444444333 2447888888874 22210 01112 12 2223333 3344455667
Q ss_pred eEEEEEEcccHHHHHHHHH--------------hCC----CccceEEEecCCCCC
Q 012188 254 SFHIVAHSLGCILALALAV--------------KHP----GSVKSLTLLAPPYYP 290 (468)
Q Consensus 254 ~i~lvGhS~Gg~ial~~a~--------------~~p----~~v~~lVl~~p~~~~ 290 (468)
+++|+|+|.|+.++-.++. ..| ++|.++++++-|...
T Consensus 83 kivl~GYSQGA~V~~~~~~~~~~~~~~i~~~~~~l~~~~~~~V~avvlfGdP~~~ 137 (207)
T 1qoz_A 83 QLVLVGYSQGAQIFDNALCGGGDPGEGITNTAVPLTAGAVSAVKAAIFMGDPRNI 137 (207)
T ss_dssp EEEEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCTTCB
T ss_pred cEEEEEeCchHHHHHHHHhccCcccccccCCCCCCChHHhccEEEEEEEcCCccc
Confidence 9999999999999887764 122 468899998866543
|
| >2yij_A Phospholipase A1-iigamma; hydrolase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=83.69 E-value=0.24 Score=48.01 Aligned_cols=37 Identities=32% Similarity=0.329 Sum_probs=26.2
Q ss_pred HHHHHHHHHHhcccCC--ceEEEEEEcccHHHHHHHHHhC
Q 012188 237 EHLDMIEKSVIEPNKV--KSFHIVAHSLGCILALALAVKH 274 (468)
Q Consensus 237 ~~~~di~~~l~~~l~~--~~i~lvGhS~Gg~ial~~a~~~ 274 (468)
+..+.| ..+++.... .++++.|||+||.+|..+|...
T Consensus 211 ~Vl~~l-~~ll~~yp~~~~~I~vTGHSLGGALA~L~A~~L 249 (419)
T 2yij_A 211 QVLREV-GRLLEKYKDEEVSITICGHSLGAALATLSATDI 249 (419)
Confidence 334444 455555543 4799999999999999888654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 468 | ||||
| d1k8qa_ | 377 | c.69.1.6 (A:) Gastric lipase {Dog (Canis familiari | 6e-15 | |
| d1cvla_ | 319 | c.69.1.18 (A:) Lipase {Chromobacterium viscosum [T | 1e-13 | |
| d3c70a1 | 256 | c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber t | 2e-13 | |
| d1q0ra_ | 297 | c.69.1.28 (A:) Aclacinomycin methylesterase RdmC { | 1e-12 | |
| d1xkla_ | 258 | c.69.1.20 (A:) Salicylic acid-binding protein 2 (S | 5e-12 | |
| d1ex9a_ | 285 | c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [Tax | 2e-11 | |
| d1pjaa_ | 268 | c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {H | 3e-11 | |
| d1azwa_ | 313 | c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas | 4e-11 | |
| d1wm1a_ | 313 | c.69.1.7 (A:) Proline aminopeptidase {Serratia mar | 6e-10 | |
| d2rhwa1 | 283 | c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2 | 1e-09 | |
| d1zd3a2 | 322 | c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, | 4e-09 | |
| d1mj5a_ | 298 | c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomona | 1e-07 | |
| d1mtza_ | 290 | c.69.1.7 (A:) Tricorn interacting factor F1 {Archa | 3e-07 | |
| d1uk8a_ | 271 | c.69.1.10 (A:) Meta-cleavage product hydrolase Cum | 4e-07 | |
| d1xkta_ | 286 | c.69.1.22 (A:) Fatty acid synthase {Human (Homo sa | 3e-06 | |
| d1m33a_ | 256 | c.69.1.26 (A:) Biotin biosynthesis protein BioH {E | 3e-06 | |
| d1tcaa_ | 317 | c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Cand | 1e-05 | |
| d1j1ia_ | 268 | c.69.1.10 (A:) Meta cleavage compound hydrolase Ca | 2e-05 | |
| d2dsta1 | 122 | c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 | 7e-05 | |
| d1a8qa_ | 274 | c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces au | 9e-05 | |
| d1c4xa_ | 281 | c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-di | 1e-04 | |
| d1qlwa_ | 318 | c.69.1.15 (A:) A novel bacterial esterase {Alcalig | 3e-04 | |
| d1thta_ | 302 | c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase | 0.002 | |
| d1brta_ | 277 | c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces au | 0.004 |
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} Length = 377 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Score = 74.0 bits (180), Expect = 6e-15
Identities = 33/294 (11%), Positives = 79/294 (26%), Gaps = 43/294 (14%)
Query: 191 GPSAFWTETLFPNFSSA---SKSTYRLFAIDLLGFGRSPKPTD-------------SLYT 234
+ W + PN S A + + Y ++ + G + +
Sbjct: 69 ASATNWI-SNLPNNSLAFILADAGYDVWLGNSRGNTWARRNLYYSPDSVEFWAFSFDEMA 127
Query: 235 VREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKS---LTLLAPPYYPV 291
+ I+ +++ H V HS G + +P K LAP
Sbjct: 128 KYDLPATIDF-ILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVATVK 186
Query: 292 PKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKL--- 348
++ ++ ++ + + ++ +C + L +
Sbjct: 187 YTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGF 246
Query: 349 ----VTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRN---------- 394
+ +R+ +L + H + G D
Sbjct: 247 DTMNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPY 306
Query: 395 ----HVKCDVNVFHGEDDELIPVECSYNVQRKIPRA-RVKVIEKKDHITIVVGR 443
+ + V++G +D L + K+P + I +H+ +
Sbjct: 307 YNLTDMHVPIAVWNGGNDLLADPHDVDLLLSKLPNLIYHRKIPPYNHLDFIWAM 360
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} Length = 319 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Score = 69.5 bits (169), Expect = 1e-13
Identities = 21/148 (14%), Positives = 49/148 (33%), Gaps = 11/148 (7%)
Query: 208 SKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILA 267
+++ +L GF P + ++ V+ +++ HS G + +
Sbjct: 38 QSHGAKVYVANLSGFQSDDGPNGRGEQLLAYVK----QVLAATGATKVNLIGHSQGGLTS 93
Query: 268 LALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHI 327
+A P V S+T + P+ +G++ + +V + + P +A +
Sbjct: 94 RYVAAVAPQLVASVTTIGTPH----RGSEFADFVQDVL---KTDPTGLSSTVIAAFVNVF 146
Query: 328 SRTICLLICKNHRVWEFLAKLVTRNRIR 355
+ + L L T
Sbjct: 147 GTLVSSSHNTDQDALAALRTLTTAQTAT 174
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Score = 67.6 bits (163), Expect = 2e-13
Identities = 29/247 (11%), Positives = 67/247 (27%), Gaps = 21/247 (8%)
Query: 208 SKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILA 267
+++ A+DL G P+ + + + E+ + + + + +V S G +
Sbjct: 26 EALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEALPPGEKVILVGESCGGLNI 85
Query: 268 LALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHI 327
A K+ + + S V + + W + E
Sbjct: 86 AIAADKYCEKIAAAVFHNSV--LPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGKEIT 143
Query: 328 SRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDG 387
+ + + + + ++ T F + T
Sbjct: 144 GLKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLFQNILAKRPFFTKEGYGS-------- 195
Query: 388 YLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTF 447
+ DE+ E +V +E DH + + + K
Sbjct: 196 ----------IKKIYVWTDQDEIFLPEFQLWQIENYKPDKVYKVEGGDHK-LQLTKTKEI 244
Query: 448 ARELEEI 454
A L+E+
Sbjct: 245 AEILQEV 251
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Score = 65.7 bits (158), Expect = 1e-12
Identities = 39/271 (14%), Positives = 75/271 (27%), Gaps = 8/271 (2%)
Query: 191 GPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLD-MIEKSVIEP 249
+ W + + + D GRS + + +V++
Sbjct: 33 LSALGWPDEFARRLADGG---LHVIRYDHRDTGRSTTRDFAAHPYGFGELAADAVAVLDG 89
Query: 250 NKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRR 309
V H+V S+G + +A+ H + SLT+L + A + + +
Sbjct: 90 WGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDG 149
Query: 310 VWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNA 369
+ + + K W L+ + + +
Sbjct: 150 LPGPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEY--ARWEERAIDH 207
Query: 370 AWHTLHNIICGTANKLDGYLDAVRNH-VKCDVNVFHGEDDELIPVECSYNVQRKIPRARV 428
A L + L A V V E D + P ++ IP AR+
Sbjct: 208 AGGVLAEPYAHYSLTLPPPSRAAELREVTVPTLVIQAEHDPIAPAPHGKHLAGLIPTARL 267
Query: 429 KVIEKKDHITIVVGRQKTFARELEEIWRSSS 459
I H + A + RS++
Sbjct: 268 AEIPGMGH-ALPSSVHGPLAEVILAHTRSAA 297
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Score = 63.8 bits (153), Expect = 5e-12
Identities = 30/247 (12%), Positives = 68/247 (27%), Gaps = 19/247 (7%)
Query: 208 SKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILA 267
+ +++ A+DL G + + L T+ ++ + + + + + +V HSLG +
Sbjct: 26 EAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLMELMESLSADEKVILVGHSLGGMNL 85
Query: 268 LALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHI 327
K+P + + LA + + L +
Sbjct: 86 GLAMEKYPQKIYAAVFLAAFMPDSVHNSS--------------FVLEQYNERTPAENWLD 131
Query: 328 SRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDG 387
++ + + F + L + A + +
Sbjct: 132 TQFLPYGSPEEPLTSMFFG----PKFLAHKLYQLCSPEDLALASSLVRPSSLFMEDLSKA 187
Query: 388 YLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTF 447
+D+ IP E I I+ DH+ ++ +
Sbjct: 188 KYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIGVTEAIEIKGADHM-AMLCEPQKL 246
Query: 448 ARELEEI 454
L EI
Sbjct: 247 CASLLEI 253
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 62.5 bits (151), Expect = 2e-11
Identities = 16/127 (12%), Positives = 44/127 (34%), Gaps = 12/127 (9%)
Query: 191 GPSAFWTETLFPNFSSA-SKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEP 249
G + SA + +++ ++ S + L +E+ ++
Sbjct: 18 GFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSE------VRGEQLLQQVEE-IVAL 70
Query: 250 NKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRR 309
+ +++ HS G +A P + S T + P+ KG+ + ++ +
Sbjct: 71 SGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPH----KGSDTADFLRQIPPGSA 126
Query: 310 VWPLIAF 316
+++
Sbjct: 127 GEAVLSG 133
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.3 bits (147), Expect = 3e-11
Identities = 28/284 (9%), Positives = 72/284 (25%), Gaps = 29/284 (10%)
Query: 180 SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHL 239
S + + V S++ L + + +DL S +P V+
Sbjct: 1 SYKPVIVVHGLFDSSYSFRHLLEYINETH-PGTVVTVLDLFDGRESLRPLW--EQVQGFR 57
Query: 240 DMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGS-VKSLTLLAPPYYPVPKGAQAS 298
+ + + + + H++ +S G ++ AL V S L+ P
Sbjct: 58 EAVVPIMAKAPQG--VHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQ------- 108
Query: 299 QYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFL 358
Y + C+ + + + +
Sbjct: 109 -YGDTDYLKWLFPTSMRSNLYRICYSPWGQEFSICNYWHDPHHDDLYLNASSFLALINGE 167
Query: 359 LEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSY- 417
+ + + +++ + G D V + F+ ++ ++ +E
Sbjct: 168 RDHPNATVWRKNFLRVGHLVL-----IGGPDDGVITPWQSSFFGFYDANETVLEMEEQLV 222
Query: 418 --------NVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEE 453
+ H T + + +E
Sbjct: 223 YLRDSFGLKTLLARGAIVRCPMAGISH-TAWHSNRTLYETCIEP 265
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Score = 61.7 bits (148), Expect = 4e-11
Identities = 41/235 (17%), Positives = 70/235 (29%), Gaps = 11/235 (4%)
Query: 212 YRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALA 271
YR+ D G GRS D + L + + V + + S G LALA A
Sbjct: 61 YRIVLFDQRGSGRSTPHADLVDNTTWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYA 120
Query: 272 VKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTI 331
HP V L L + Q ++ W + +S
Sbjct: 121 QTHPQQVTELVLRGIFLLRRFELEWFYQEGASRL-FPDAWEHYLNAIPPVERADLMSAFH 179
Query: 332 CLLICKNHRVWEFLAKLVTRNRIRTFL----------LEGFFCHTHNAAWHTLHNIICGT 381
L + AK + T E A + + G
Sbjct: 180 RRLTSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIENHYFVNGGF 239
Query: 382 ANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDH 436
D L + HG D + P++ ++++ + P+A++++ H
Sbjct: 240 FEVEDQLLRDAHRIADIPGVIVHGRYDVVCPLQSAWDLHKAWPKAQLQISPASGH 294
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Score = 58.0 bits (138), Expect = 6e-10
Identities = 38/233 (16%), Positives = 72/233 (30%), Gaps = 8/233 (3%)
Query: 212 YRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALA 271
Y++ D G GRS HL + + E V+ + + S G LALA A
Sbjct: 61 YKVLLFDQRGCGRSRPHASLDNNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYA 120
Query: 272 VKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAF------GASMACWYE 325
HP V + L + Q + P + +++ +A + +
Sbjct: 121 QTHPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWERVLSILSDDERKDVIAAYRQ 180
Query: 326 HISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCH--THNAAWHTLHNIICGTAN 383
++ + + ++W A + G
Sbjct: 181 RLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYFTHLGFLE 240
Query: 384 KLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDH 436
D L V + HG D V+ ++++ + P A + ++E H
Sbjct: 241 SDDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAWPEAELHIVEGAGH 293
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Score = 56.8 bits (135), Expect = 1e-09
Identities = 41/269 (15%), Positives = 83/269 (30%), Gaps = 24/269 (8%)
Query: 185 LFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEK 244
+ + GP A + N + YR+ D GF +S + ++
Sbjct: 34 IMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKG 93
Query: 245 SVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRK 304
+ + ++ + G AL A+++P + L L+ P A ++
Sbjct: 94 LMDALDIDRAHLVGNAM-GGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKL 152
Query: 305 VAPRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFC 364
+ P YE + + + + + + E L + R F
Sbjct: 153 LFKLYAEP----------SYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFL 202
Query: 365 HTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIP 424
+ A + ++ A +K + G DD +P++ + I
Sbjct: 203 ISAQKAPLSTWDVT------------ARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNID 250
Query: 425 RARVKVIEKKDHITIVVGRQKTFARELEE 453
AR+ V K H F R + +
Sbjct: 251 DARLHVFSKCGHW-AQWEHADEFNRLVID 278
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.7 bits (132), Expect = 4e-09
Identities = 35/243 (14%), Positives = 82/243 (33%), Gaps = 14/243 (5%)
Query: 208 SKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILA 267
+++ YR+ A+D+ G+G S P + E L + ++ + + H G +L
Sbjct: 56 AQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLV 115
Query: 268 LALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHI 327
+A+ +P V+++ L P+ P + + G + A +++
Sbjct: 116 WYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLYFQEPGVAEAELEQNL 175
Query: 328 SRTICLLICKNHRVWEFLAKLVTRNR--------------IRTFLLEGFFCHTHNAAWHT 373
SRT L + + K+ + ++ + + +
Sbjct: 176 SRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRG 235
Query: 374 LHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEK 433
N ++ + + E D ++ + S +++ IP + IE
Sbjct: 236 PLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPHLKRGHIED 295
Query: 434 KDH 436
H
Sbjct: 296 CGH 298
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Score = 50.6 bits (119), Expect = 1e-07
Identities = 33/224 (14%), Positives = 55/224 (24%), Gaps = 13/224 (5%)
Query: 212 YRLFAIDLLGFGRSPKPTDS---LYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILAL 268
RL A DL+G G S K S Y EH D ++ + +V H G L
Sbjct: 55 GRLIACDLIGMGDSDKLDPSGPERYAYAEHRDYLDALWEALDLGDRVVLVVHDWGSALGF 114
Query: 269 ALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHIS 328
A +H V+ + + P+ A + R + E +
Sbjct: 115 DWARRHRERVQGIAYMEAIAMPIE-WADFPEQDRDLFQAFRSQAGEELVLQDNVFVEQVL 173
Query: 329 RTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGY 388
+ L + + + R L + I
Sbjct: 174 PGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIAR--------D 225
Query: 389 LDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIE 432
+ + E L + R P +
Sbjct: 226 YAGWLSESPIPKLFINAEPGALTT-GRMRDFCRTWPNQTEITVA 268
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 290 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 49.9 bits (117), Expect = 3e-07
Identities = 42/258 (16%), Positives = 89/258 (34%), Gaps = 10/258 (3%)
Query: 196 WTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSF 255
+ + +K + D G GRS +P S +T+ ++ E + +
Sbjct: 37 MSHDYLLSLRDMTKEGITVLFYDQFGCGRSEEPDQSKFTIDYGVEEAEALRSKLFGNEKV 96
Query: 256 HIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIA 315
++ S G LALA AVK+ +K L + VP + ++ ++ + +
Sbjct: 97 FLMGSSYGGALALAYAVKYQDHLKGLIVSG-GLSSVPLTVKEMNRLIDELPAKYRDAIKK 155
Query: 316 FGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLH 375
+G+S + + ++ E V ++ LE + +
Sbjct: 156 YGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKS------LEYAERRNVYRIMNGPN 209
Query: 376 NIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKD 435
K D + K + GE DE+ P + + KI + + V
Sbjct: 210 EFTITGTIKDWDITDKISAI-KIPTLITVGEYDEVTP-NVARVIHEKIAGSELHVFRDCS 267
Query: 436 HITIVVGRQKTFARELEE 453
H+ + ++ + + L +
Sbjct: 268 HL-TMWEDREGYNKLLSD 284
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Score = 49.0 bits (115), Expect = 4e-07
Identities = 42/242 (17%), Positives = 87/242 (35%), Gaps = 28/242 (11%)
Query: 212 YRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALA 271
YR+ A D++GFG + +P + Y+ +D I + + HIV ++ G LA+A A
Sbjct: 53 YRVIAPDMVGFGFTDRPENYNYSKDSWVDHIIGIMDALEI-EKAHIVGNAFGGGLAIATA 111
Query: 272 VKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTI 331
+++ V + L+ + E++ +
Sbjct: 112 LRYSERVDRMVLMGAAGTRFDV-----------------TEGLNAVWGYTPSIENMRNLL 154
Query: 332 CLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDA 391
+ V + LA+L I+ E ++ ++ D
Sbjct: 155 DIFAYDRSLVTDELARLRYEASIQPGFQE---------SFSSMFPEPRQRWIDALASSDE 205
Query: 392 VRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFAREL 451
+ + + HG +D+++P+ S + I RA++ V + H + + F R +
Sbjct: 206 DIKTLPNETLIIHGREDQVVPLSSSLRLGELIDRAQLHVFGRCGHW-TQIEQTDRFNRLV 264
Query: 452 EE 453
E
Sbjct: 265 VE 266
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.3 bits (108), Expect = 3e-06
Identities = 18/232 (7%), Positives = 47/232 (20%), Gaps = 15/232 (6%)
Query: 212 YRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALA 271
+ + ++ + + + + +S G +A +
Sbjct: 50 IPTYGLQCTRAAPLD-------SIHSLAAYYIDCIRQVQPEGPYRVAGYSYGACVAFEMC 102
Query: 272 VKHPGSVKSLTLLA--PPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISR 329
+ + P A R A +
Sbjct: 103 SQLQAQQSPAPTHNSLFLFDGSPTYVLAYTQSYRAKLTPGCEAEAETEAICFFVQQFTDM 162
Query: 330 TICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYL 389
++ + ++ L+ + Y
Sbjct: 163 EHNRVLEALLPLKGLEERVAAAVD----LIIKSHQGLDRQELSFAARSFYYKLRAAEQYT 218
Query: 390 DAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRA-RVKVIEKKDHITIV 440
+ + + + YN+ + V VIE DH T++
Sbjct: 219 PKAKYYGNVMLLRAKTGGAYGEDLGADYNLSQVCDGKVSVHVIE-GDHRTLL 269
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Score = 46.0 bits (107), Expect = 3e-06
Identities = 37/246 (15%), Positives = 65/246 (26%), Gaps = 30/246 (12%)
Query: 212 YRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALA 271
+ L +DL GFGRS + + SLG ++A +A
Sbjct: 38 FTLHLVDLPGFGRSRGFGALSLADMAEAVL-------QQAPDKAIWLGWSLGGLVASQIA 90
Query: 272 VKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTI 331
+ HP V++L +A + R P ++A
Sbjct: 91 LTHPERVRALVTVASSPC----------FSARDEWPGIKPDVLAGFQQQLSD-------- 132
Query: 332 CLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDA 391
+ V FLA + + G L
Sbjct: 133 ----DQQRTVERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQ 188
Query: 392 VRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFAREL 451
+V +G D L+P + + + P + + K H + F L
Sbjct: 189 PLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHA-PFISHPAEFCHLL 247
Query: 452 EEIWRS 457
+ +
Sbjct: 248 VALKQR 253
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Score = 44.7 bits (105), Expect = 1e-05
Identities = 23/116 (19%), Positives = 35/116 (30%), Gaps = 11/116 (9%)
Query: 178 SSSSRDTLFVKTQGPSAFWTETLFPNFSSASKST-YRLFAIDLLGFGRSPKPTDSLYTVR 236
SS S+ L V G ++ N+ S Y I F + ++ Y V
Sbjct: 28 SSVSKPILLV--PGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLNDTQVNTEYMVN 85
Query: 237 EHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGS---VKSLTLLAPPYY 289
+ S ++ S G ++A P V L AP Y
Sbjct: 86 AITALYAGSGNNK-----LPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK 136
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Score = 43.7 bits (101), Expect = 2e-05
Identities = 46/263 (17%), Positives = 82/263 (31%), Gaps = 30/263 (11%)
Query: 191 GPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPN 250
G + +E + N YR+ A+D+LGFG++ KP YT + + + N
Sbjct: 31 GGAGAESEGNWRNVIPILARHYRVIAMDMLGFGKTAKPDIE-YTQDRRIRHLHDFIKAMN 89
Query: 251 KVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRV 310
IV +S+G L ++V H V +L L+ V +
Sbjct: 90 FDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEI-------------HEDL 136
Query: 311 WPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAA 370
P+I + + + + + T R +
Sbjct: 137 RPIINYDFTREGMVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGG 196
Query: 371 WHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKV 430
I V+ V G+DD+++PVE +Y I + +
Sbjct: 197 LFYDPEFI---------------RKVQVPTLVVQGKDDKVVPVETAYKFLDLIDDSWGYI 241
Query: 431 IEKKDHITIVVGRQKTFARELEE 453
I H ++ + FA
Sbjct: 242 IPHCGHW-AMIEHPEDFANATLS 263
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} Length = 122 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Score = 40.1 bits (93), Expect = 7e-05
Identities = 14/86 (16%), Positives = 26/86 (30%), Gaps = 4/86 (4%)
Query: 190 QGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEP 249
+GP + A Y + +DL G+GR+ P + +
Sbjct: 20 KGPPVLLVAEEASRWPEALPEGYAFYLLDLPGYGRTEGPRMAPEELAHF----VAGFAVM 75
Query: 250 NKVKSFHIVAHSLGCILALALAVKHP 275
+ + ++ LG L L
Sbjct: 76 MNLGAPWVLLRGLGLALGPHLEALGL 101
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Score = 41.8 bits (96), Expect = 9e-05
Identities = 44/245 (17%), Positives = 80/245 (32%), Gaps = 24/245 (9%)
Query: 212 YRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSL-GCILALAL 270
YR A D G G S D D+ + + ++ +VAHS+ G LA +
Sbjct: 47 YRGIAHDRRGHGHSTPVWDGYDFDTFADDLNDL--LTDLDLRDVTLVAHSMGGGELARYV 104
Query: 271 AVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRT 330
G ++S LL+ + K + V +V ++ +
Sbjct: 105 GRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGVLTERSQFWKDTAEG--- 161
Query: 331 ICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLD 390
+R + + + + +
Sbjct: 162 ----FFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDLK-------- 209
Query: 391 AVRNHVKCDVNVFHGEDDELIPVECS-YNVQRKIPRARVKVIEKKDH-ITIVVGRQKTFA 448
V HG+DD+++P++ + + IP A +KV E H I +V G ++ F
Sbjct: 210 ----KFDIPTLVVHGDDDQVVPIDATGRKSAQIIPNAELKVYEGSSHGIAMVPGDKEKFN 265
Query: 449 RELEE 453
R+L E
Sbjct: 266 RDLLE 270
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Score = 41.8 bits (96), Expect = 1e-04
Identities = 31/246 (12%), Positives = 67/246 (27%), Gaps = 20/246 (8%)
Query: 212 YRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALA 271
+ + A DL+GFG+S P + + M + ++ +
Sbjct: 56 FFVVAPDLIGFGQSEYPETYPGHIMSWVGMRVEQILGLMNHFGIEKSHIVGNSMGGAVTL 115
Query: 272 VKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTI 331
+ + +A + R +A L + + +
Sbjct: 116 QLVVEAPERFDKVALMGSVGAPMNARPPELARLLAFYADPRLTPYRELIHSFVYDPENFP 175
Query: 332 CLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDA 391
+ R + + A
Sbjct: 176 GMEEIVKSRFE-------------------VANDPEVRRIQEVMFESMKAGMESLVIPPA 216
Query: 392 VRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFAREL 451
+ DV VFHG D ++P++ S + + + A + V+++ H + R L
Sbjct: 217 TLGRLPHDVLVFHGRQDRIVPLDTSLYLTKHLKHAELVVLDRCGHW-AQLERWDAMGPML 275
Query: 452 EEIWRS 457
E +R+
Sbjct: 276 MEHFRA 281
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Score = 40.2 bits (92), Expect = 3e-04
Identities = 24/283 (8%), Positives = 49/283 (17%), Gaps = 52/283 (18%)
Query: 185 LFVKTQGPSAFWTETLFPNFSSASKST----YRLFAIDLLGFGRSPKPTDSLYTVREHLD 240
+ + ET + Y + ID G GRS ++ V+
Sbjct: 62 TLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLGKA 121
Query: 241 MIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQY 300
G A L
Sbjct: 122 PASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQM------------- 168
Query: 301 VMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLE 360
P + + ++A + + ++ + + + + N +
Sbjct: 169 -----VPDWLGSMPTPNPTVANLSKLAIKLDGTVLLSHSQSGIYPFQTAAMNPKGITAIV 223
Query: 361 GFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQ 420
V V G+ E P
Sbjct: 224 SVEPGECPKPEDVKPLT-------------------SIPVLVVFGDHIEEFPRWAPRLKA 264
Query: 421 RKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSSSGHEP 463
+ G + L + + H
Sbjct: 265 CHAFIDALN----------AAGGKGQLM-SLPALGVHGNSHMM 296
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Score = 37.6 bits (86), Expect = 0.002
Identities = 20/233 (8%), Positives = 54/233 (23%), Gaps = 54/233 (23%)
Query: 208 SKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLD--MIEKSVIEPNKVKSFHIVAHSLGCI 265
S + + +F D L + +T+ + ++ ++ ++A SL
Sbjct: 56 STNGFHVFRYDSLHHVGLSSGSIDEFTMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSAR 115
Query: 266 LALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYE 325
+A + S + ++ E
Sbjct: 116 VAYEVISDLELS------------------------------FLITA--VGVVNLRDTLE 143
Query: 326 HISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKL 385
+ F + + + L T +
Sbjct: 144 --------------KALGFDYLSLPIDELPNDLDFEGHKLGSEVFVRDCFEHHWDTLDST 189
Query: 386 DGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRA--RVKVIEKKDH 436
+ + + F +D+ + E Y++ I ++ + H
Sbjct: 190 LDKVA----NTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSH 238
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Score = 36.8 bits (83), Expect = 0.004
Identities = 17/150 (11%), Positives = 36/150 (24%), Gaps = 2/150 (1%)
Query: 305 VAPRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFC 364
+ P + + + F + T + E
Sbjct: 125 LEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVR 184
Query: 365 HTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECS-YNVQRKI 423
++ N A A + + HG D +P+E + + +
Sbjct: 185 NSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKAL 244
Query: 424 PRARVKVIEKKDHITIVVGRQKTFARELEE 453
P A +E H ++ + L
Sbjct: 245 PSAEYVEVEGAPHG-LLWTHAEEVNTALLA 273
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 468 | |||
| d1q0ra_ | 297 | Aclacinomycin methylesterase RdmC {Streptomyces pu | 100.0 | |
| d1zd3a2 | 322 | Mammalian epoxide hydrolase, C-terminal domain {Hu | 100.0 | |
| d1uk8a_ | 271 | Meta-cleavage product hydrolase CumD {Pseudomonas | 100.0 | |
| d2rhwa1 | 283 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1c4xa_ | 281 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1bn7a_ | 291 | Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1 | 100.0 | |
| d1j1ia_ | 268 | Meta cleavage compound hydrolase CarC {Janthinobac | 99.98 | |
| d1azwa_ | 313 | Proline iminopeptidase {Xanthomonas campestris, pv | 99.98 | |
| d1mtza_ | 290 | Tricorn interacting factor F1 {Archaeon Thermoplas | 99.98 | |
| d1brta_ | 277 | Bromoperoxidase A2 {Streptomyces aureofaciens [Tax | 99.97 | |
| d1ehya_ | 293 | Bacterial epoxide hydrolase {Agrobacterium radioba | 99.97 | |
| d1b6ga_ | 310 | Haloalkane dehalogenase {Xanthobacter autotrophicu | 99.97 | |
| d1a8qa_ | 274 | Bromoperoxidase A1 {Streptomyces aureofaciens [Tax | 99.97 | |
| d1a88a_ | 275 | Chloroperoxidase L {Streptomyces lividans [TaxId: | 99.97 | |
| d1hkha_ | 279 | Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] | 99.97 | |
| d1m33a_ | 256 | Biotin biosynthesis protein BioH {Escherichia coli | 99.97 | |
| d1a8sa_ | 273 | Chloroperoxidase F {Pseudomonas fluorescens [TaxId | 99.97 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 99.97 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 99.97 | |
| d1imja_ | 208 | Ccg1/TafII250-interacting factor B (Cib) {Human (H | 99.97 | |
| d1wm1a_ | 313 | Proline aminopeptidase {Serratia marcescens [TaxId | 99.96 | |
| d3c70a1 | 256 | Hydroxynitrile lyase {Rubber tree (Hevea brasilien | 99.96 | |
| d1mj5a_ | 298 | Haloalkane dehalogenase {Sphingomonas paucimobilis | 99.96 | |
| d1r3da_ | 264 | Hypothetical protein VC1974 {Vibrio cholerae [TaxI | 99.95 | |
| d1tqha_ | 242 | Carboxylesterase Est {Bacillus stearothermophilus | 99.94 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 99.93 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 99.93 | |
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 99.92 | |
| d1thta_ | 302 | Myristoyl-ACP-specific thioesterase {Vibrio harvey | 99.91 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 99.88 | |
| d2fuka1 | 218 | XC6422 protein {Xanthomonas campestris [TaxId: 339 | 99.87 | |
| d1uxoa_ | 186 | Hypothetical protein YdeN {Bacillus subtilis [TaxI | 99.87 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 99.87 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 99.86 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 99.86 | |
| d1xkta_ | 286 | Fatty acid synthase {Human (Homo sapiens) [TaxId: | 99.85 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 99.85 | |
| d1jmkc_ | 230 | Surfactin synthetase, SrfA {Bacillus subtilis [Tax | 99.85 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 99.84 | |
| d1l7aa_ | 318 | Cephalosporin C deacetylase {Bacillus subtilis [Ta | 99.82 | |
| d2hu7a2 | 260 | Acylamino-acid-releasing enzyme, C-terminal donain | 99.79 | |
| d1ufoa_ | 238 | Hypothetical protein TT1662 {Thermus thermophilus | 99.79 | |
| d1vlqa_ | 322 | Acetyl xylan esterase TM0077 {Thermotoga maritima | 99.76 | |
| d1mo2a_ | 255 | Erythromycin polyketide synthase {Saccharopolyspor | 99.75 | |
| d2dsta1 | 122 | Hypothetical protein TTHA1544 {Thermus thermophilu | 99.73 | |
| d1qlwa_ | 318 | A novel bacterial esterase {Alcaligenes sp. [TaxId | 99.72 | |
| d1jfra_ | 260 | Lipase {Streptomyces exfoliatus [TaxId: 1905]} | 99.7 | |
| d1xfda2 | 258 | Dipeptidyl aminopeptidase-like protein 6, DPP6, C- | 99.69 | |
| d1fj2a_ | 229 | Acyl protein thioesterase 1 {Human (Homo sapiens) | 99.68 | |
| d2i3da1 | 218 | Hypothetical protein Atu1826 {Agrobacterium tumefa | 99.67 | |
| d2bgra2 | 258 | Dipeptidyl peptidase IV/CD26, C-terminal domain {P | 99.67 | |
| d2h1ia1 | 202 | Carboxylesterase {Bacillus cereus [TaxId: 1396]} | 99.65 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 99.65 | |
| d2r8ba1 | 203 | Uncharacterized protein Atu2452 {Agrobacterium tum | 99.63 | |
| d3b5ea1 | 209 | Uncharacterized protein Mll8374 {Mesorhizobium lot | 99.61 | |
| d1tcaa_ | 317 | Triacylglycerol lipase {Yeast (Candida antarctica) | 99.59 | |
| d1cvla_ | 319 | Lipase {Chromobacterium viscosum [TaxId: 42739]} | 99.58 | |
| d1dina_ | 233 | Dienelactone hydrolase {Pseudomonas sp., B13 [TaxI | 99.57 | |
| d2pbla1 | 261 | Uncharacterized protein TM1040_2492 {Silicibacter | 99.5 | |
| d1ex9a_ | 285 | Lipase {Pseudomonas aeruginosa [TaxId: 287]} | 99.49 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 99.45 | |
| d1ju3a2 | 347 | Bacterial cocaine esterase N-terminal domain {Rhod | 99.4 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 99.25 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 99.25 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 99.25 | |
| d1jjia_ | 311 | Carboxylesterase {Archaeon Archaeoglobus fulgidus | 99.16 | |
| d1qfma2 | 280 | Prolyl oligopeptidase, C-terminal domain {Pig (Sus | 99.15 | |
| d1u4na_ | 308 | Carboxylesterase {Alicyclobacillus acidocaldarius | 99.1 | |
| d1lzla_ | 317 | Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | 99.08 | |
| d1jjfa_ | 255 | Feruloyl esterase domain of the cellulosomal xylan | 99.08 | |
| d1dqza_ | 280 | Antigen 85c {Mycobacterium tuberculosis [TaxId: 17 | 98.98 | |
| d1r88a_ | 267 | Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta | 98.98 | |
| d1sfra_ | 288 | Antigen 85a {Mycobacterium tuberculosis [TaxId: 17 | 98.97 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 98.96 | |
| d3c8da2 | 246 | Enterochelin esterase, catalytic domain {Shigella | 98.84 | |
| d1ei9a_ | 279 | Palmitoyl protein thioesterase 1 {Cow (Bos taurus) | 98.72 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 98.72 | |
| d1rp1a2 | 337 | Pancreatic lipase, N-terminal domain {Dog (Canis f | 98.64 | |
| d1ivya_ | 452 | Human 'protective protein', HPP {Human (Homo sapie | 98.61 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 98.59 | |
| d1wpxa1 | 421 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 98.58 | |
| d1bu8a2 | 338 | Pancreatic lipase, N-terminal domain {Rat (Rattus | 98.55 | |
| d2d81a1 | 318 | Polyhydroxybutyrate depolymerase {Penicillium funi | 98.52 | |
| d1pv1a_ | 299 | Hypothetical esterase YJL068C {Baker's yeast (Sacc | 98.51 | |
| d1wb4a1 | 273 | Feruloyl esterase domain of the cellulosomal xylan | 98.44 | |
| d2gzsa1 | 265 | Enterobactin and salmochelin hydrolase IroE {Esche | 98.42 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 98.26 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 98.11 | |
| d1qe3a_ | 483 | Thermophilic para-nitrobenzyl esterase (PNB estera | 97.28 | |
| d2h7ca1 | 532 | Mammalian carboxylesterase (liver carboxylesterase | 97.11 | |
| d2ha2a1 | 542 | Acetylcholinesterase {Mouse (Mus musculus) [TaxId: | 97.05 | |
| d1llfa_ | 534 | Type-B carboxylesterase/lipase {Candida cylindrace | 96.94 | |
| d1ea5a_ | 532 | Acetylcholinesterase {Pacific electric ray (Torped | 96.94 | |
| d1p0ia_ | 526 | Butyryl cholinesterase {Human (Homo sapiens) [TaxI | 96.93 | |
| d1ukca_ | 517 | Esterase EstA {Aspergillus niger [TaxId: 5061]} | 96.93 | |
| d1thga_ | 544 | Type-B carboxylesterase/lipase {Fungus (Geotrichum | 96.72 | |
| d1dx4a_ | 571 | Acetylcholinesterase {Fruit fly (Drosophila melano | 96.59 | |
| d2bcea_ | 579 | Bile-salt activated lipase (cholesterol esterase) | 96.37 | |
| d1tiaa_ | 271 | Triacylglycerol lipase {Penicillium camembertii [T | 93.98 | |
| d1lgya_ | 265 | Triacylglycerol lipase {Rhizopus niveus [TaxId: 48 | 93.89 | |
| d3tgla_ | 265 | Triacylglycerol lipase {Rhizomucor miehei [TaxId: | 93.87 | |
| d1uwca_ | 261 | Feruloyl esterase A {Aspergillus niger [TaxId: 506 | 93.69 | |
| d1tiba_ | 269 | Triacylglycerol lipase {Thermomyces lanuginosus, f | 93.49 | |
| d1cexa_ | 197 | Cutinase {Fungus (Fusarium solani), subsp. pisi [T | 86.36 |
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Probab=100.00 E-value=5.4e-33 Score=261.93 Aligned_cols=272 Identities=18% Similarity=0.112 Sum_probs=171.2
Q ss_pred CCceeEEEecC-CCCeEEEEecCCCCcc-chhhhhhhccccCCCcceEEEECCCCCCCCCCCCC--CCCCHHHHHHHHHH
Q 012188 169 CDCKFCTCWSS-SSRDTLFVKTQGPSAF-WTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD--SLYTVREHLDMIEK 244 (468)
Q Consensus 169 ~~~~~~~~~~~-~~p~vl~lHG~g~s~~-~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~--~~~t~~~~~~di~~ 244 (468)
+..++|..|++ ++|+|||+||++.+.. |...+.+.|. ++||+|+++|+||||+|+.+.. ..|+++++++|+ .
T Consensus 9 ~~~i~y~~~G~~~~p~vvl~HG~~~~~~~~~~~~~~~l~---~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~d~-~ 84 (297)
T d1q0ra_ 9 DVELWSDDFGDPADPALLLVMGGNLSALGWPDEFARRLA---DGGLHVIRYDHRDTGRSTTRDFAAHPYGFGELAADA-V 84 (297)
T ss_dssp TEEEEEEEESCTTSCEEEEECCTTCCGGGSCHHHHHHHH---TTTCEEEEECCTTSTTSCCCCTTTSCCCHHHHHHHH-H
T ss_pred CEEEEEEEecCCCCCEEEEECCCCcChhHHHHHHHHHHH---hCCCEEEEEeCCCCcccccccccccccccchhhhhh-c
Confidence 44588888964 6789999999988665 5555666655 4899999999999999975543 457999999999 6
Q ss_pred HHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHH
Q 012188 245 SVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWY 324 (468)
Q Consensus 245 ~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (468)
.++++++.++++++||||||.+++.+|.++|++|+++|++++........ ................+.... .......
T Consensus 85 ~ll~~l~~~~~~lvGhS~Gg~~a~~~a~~~P~~v~~lvli~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 162 (297)
T d1q0ra_ 85 AVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFD-ANIERVMRGEPTLDGLPGPQQ-PFLDALA 162 (297)
T ss_dssp HHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHH-HHHHHHHHTCCCSSCSCCCCH-HHHHHHH
T ss_pred cccccccccceeeccccccchhhhhhhcccccceeeeEEEccccccccch-hhhHHHhhhhhhhhhhhhhhH-HHHHHHH
Confidence 99999999999999999999999999999999999999999765442211 111111111111111110000 0000000
Q ss_pred HHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHH-------h-----cccccccchHHHh
Q 012188 325 EHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNII-------C-----GTANKLDGYLDAV 392 (468)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-----~~~~~~~~~~~~~ 392 (468)
. .............+....... ..................... . .............
T Consensus 163 ~--------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (297)
T d1q0ra_ 163 L--------MNQPAEGRAAEVAKRVSKWRI---LSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAAE 231 (297)
T ss_dssp H--------HHSCCCSHHHHHHHHHHHHHH---HHCSSSCCCHHHHHHHHHHHHHHTTTCCSCCCGGGGCCCCCGGGGGG
T ss_pred H--------hccccchhhHHHHHHHHHHhh---hccccccchHHHHHHHHHHhhhhccccchhhhhhhhhhhccccchhh
Confidence 0 000000000000000000000 000000000000000000000 0 0000011223344
Q ss_pred hccCCCcEEEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 393 RNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 393 ~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
++++++||++|+|++|.++|++.++.+.+.+|++++++++++||+++. |+|+++++.|.+||++.
T Consensus 232 l~~i~~Pvlvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~-e~p~~~~~~i~~~l~~~ 296 (297)
T d1q0ra_ 232 LREVTVPTLVIQAEHDPIAPAPHGKHLAGLIPTARLAEIPGMGHALPS-SVHGPLAEVILAHTRSA 296 (297)
T ss_dssp GGGCCSCEEEEEETTCSSSCTTHHHHHHHTSTTEEEEEETTCCSSCCG-GGHHHHHHHHHHHHHHT
T ss_pred hhccCCceEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCcchh-hCHHHHHHHHHHHHHhh
Confidence 578999999999999999999999999999999999999999999997 99999999999999874
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.2e-34 Score=270.58 Aligned_cols=281 Identities=16% Similarity=0.205 Sum_probs=176.1
Q ss_pred cCCCCceeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCC-CCCCHHHHHHHHHH
Q 012188 166 WSDCDCKFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD-SLYTVREHLDMIEK 244 (468)
Q Consensus 166 ~~d~~~~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~-~~~t~~~~~~di~~ 244 (468)
..||..++|..|+ ++|+|||+||++++...|..+++.|. ++||+|+++|+||||.|+.+.. ..++.+++++++ .
T Consensus 18 ~~~g~~i~y~~~G-~gp~vlllHG~~~~~~~~~~~~~~L~---~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~i-~ 92 (322)
T d1zd3a2 18 VKPRVRLHFVELG-SGPAVCLCHGFPESWYSWRYQIPALA---QAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEM-V 92 (322)
T ss_dssp EETTEEEEEEEEC-CSSEEEEECCTTCCGGGGTTHHHHHH---HTTCEEEEEECTTSTTSCCCSCGGGGSHHHHHHHH-H
T ss_pred ECCCCEEEEEEEc-CCCeEEEECCCCCCHHHHHHHHHHHH---HCCCEEEEeccccccccccccccccccccccchhh-h
Confidence 4467678999986 56999999999988877777888886 4789999999999999987654 567999999999 6
Q ss_pred HHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchh--hhhhhhHH
Q 012188 245 SVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLI--AFGASMAC 322 (468)
Q Consensus 245 ~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 322 (468)
+++++++.++++++||||||.+++.+|.++|++++++|+++++.................... .+... ........
T Consensus 93 ~l~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 170 (322)
T d1zd3a2 93 TFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVF--DYQLYFQEPGVAEAE 170 (322)
T ss_dssp HHHHHHTCSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCCCCSSSCHHHHHHTCGGG--HHHHHTTSTTHHHHH
T ss_pred hhhhcccccccccccccchHHHHHHHHHhCCccccceEEEcccccccccccchhhhhhccchh--hhHHhhhccchhhhh
Confidence 999999999999999999999999999999999999999997655433322111111100000 00000 00000000
Q ss_pred HHHHHhhHHHHHhhccc-------hhHHHHH------------HHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccc
Q 012188 323 WYEHISRTICLLICKNH-------RVWEFLA------------KLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTAN 383 (468)
Q Consensus 323 ~~~~~~~~~~~~~~~~~-------~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (468)
......+.....+.... ...+... +.........+ ...+. ..........+.....
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~ 245 (322)
T d1zd3a2 171 LEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFY-VQQFK----KSGFRGPLNWYRNMER 245 (322)
T ss_dssp HHHTHHHHHHHHSCCTTSCCCCTTSHHHHTSSSTTSCSSCCCCTTCCHHHHHHH-HHHHH----HHTTHHHHHTTSCHHH
T ss_pred hhhhHHHHHHHHhhccchhhhhHHHHhhhhccccccccchhhhhhccHHHHHHH-HHHHh----hccccccccccccccc
Confidence 00000000000000000 0000000 00000000000 00000 0000000000000000
Q ss_pred cccchHHHhhccCCCcEEEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhcC
Q 012188 384 KLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSSS 459 (468)
Q Consensus 384 ~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~ 459 (468)
...........++++||++++|++|.+++++..+.+.+.+|++++++++++||++++ |+|++|++.|.+||++..
T Consensus 246 ~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~p~~v~~~i~~FL~~~~ 320 (322)
T d1zd3a2 246 NWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPHLKRGHIEDCGHWTQM-DKPTEVNQILIKWLDSDA 320 (322)
T ss_dssp HHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTCTTCEEEEETTCCSCHHH-HSHHHHHHHHHHHHHHHT
T ss_pred ccccchhhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCchHH-hCHHHHHHHHHHHHhhcC
Confidence 011112233467899999999999999999999999999999999999999999997 999999999999998864
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=1.9e-32 Score=254.48 Aligned_cols=259 Identities=20% Similarity=0.274 Sum_probs=170.6
Q ss_pred CCCCceeEEEecCCCCeEEEEecCCCCcc-c--hhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHH
Q 012188 167 SDCDCKFCTCWSSSSRDTLFVKTQGPSAF-W--TETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIE 243 (468)
Q Consensus 167 ~d~~~~~~~~~~~~~p~vl~lHG~g~s~~-~--~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~ 243 (468)
.+|..++|+.++. +|||||+||++++.. | +..+++.|+ ++|+|+++|+||||.|+.+....++.+++++++
T Consensus 10 ~~G~~~~Y~~~G~-G~pvvllHG~~~~~~~~~~~~~~~~~l~----~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~- 83 (271)
T d1uk8a_ 10 AAGVLTNYHDVGE-GQPVILIHGSGPGVSAYANWRLTIPALS----KFYRVIAPDMVGFGFTDRPENYNYSKDSWVDHI- 83 (271)
T ss_dssp ETTEEEEEEEECC-SSEEEEECCCSTTCCHHHHHTTTHHHHT----TTSEEEEECCTTSTTSCCCTTCCCCHHHHHHHH-
T ss_pred ECCEEEEEEEEee-CCeEEEECCCCCCccHHHHHHHHHHHHh----CCCEEEEEeCCCCCCccccccccccccccchhh-
Confidence 3666788888875 689999999876433 2 334666666 899999999999999988777678899999999
Q ss_pred HHHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHH
Q 012188 244 KSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACW 323 (468)
Q Consensus 244 ~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (468)
..+++.++.++++++||||||.+++.+|.++|++++++|+++++........ ...... ..... .. .....
T Consensus 84 ~~~~~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~lil~~~~~~~~~~~~-~~~~~~---~~~~~---~~---~~~~~ 153 (271)
T d1uk8a_ 84 IGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTE-GLNAVW---GYTPS---IE---NMRNL 153 (271)
T ss_dssp HHHHHHTTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCSCCCCCH-HHHHHH---TCCSC---HH---HHHHH
T ss_pred hhhhhhhcCCCceEeeccccceeehHHHHhhhccchheeecccCCCcccchh-hhhhhh---hccch---hH---HHHHH
Confidence 7999999999999999999999999999999999999999998654422211 111111 00000 00 00000
Q ss_pred HHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEE
Q 012188 324 YEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVF 403 (468)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii 403 (468)
. ...............+............+.+.......... ... ........+.++++|+++|
T Consensus 154 ~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-----~~~~~~~~l~~i~~P~lii 217 (271)
T d1uk8a_ 154 L-------DIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQR----WID-----ALASSDEDIKTLPNETLII 217 (271)
T ss_dssp H-------HHHCSCGGGCCHHHHHHHHHHHTSTTHHHHHHTTSCSSTHH----HHH-----HHCCCHHHHTTCCSCEEEE
T ss_pred H-------HHHhhhcccchhHHHHHHHhhhhchhHHHHHHhhcchhhhh----hhh-----hccccHHHHHhhccceeEE
Confidence 0 00000000011111111000000000000000000000000 000 0011123357889999999
Q ss_pred eeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 404 HGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 404 ~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
+|++|.++|++.++.+.+.+|++++++++++||+++. |+|+++++.|.+||++.
T Consensus 218 ~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~Fl~e~ 271 (271)
T d1uk8a_ 218 HGREDQVVPLSSSLRLGELIDRAQLHVFGRCGHWTQI-EQTDRFNRLVVEFFNEA 271 (271)
T ss_dssp EETTCSSSCHHHHHHHHHHCTTEEEEEESSCCSCHHH-HTHHHHHHHHHHHHHTC
T ss_pred ecCCCCCcCHHHHHHHHHhCCCCEEEEECCCCCchHH-HCHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999997 99999999999999873
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Probab=100.00 E-value=1.2e-32 Score=257.80 Aligned_cols=258 Identities=17% Similarity=0.196 Sum_probs=167.7
Q ss_pred ceeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhccc
Q 012188 171 CKFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPN 250 (468)
Q Consensus 171 ~~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l 250 (468)
.++|+.++ ++|+|||+||++.+...|..+...+...+++||+|+++|+||||.|..+....++...+++++ ..+++++
T Consensus 21 ~i~y~~~G-~G~~ivllHG~~~~~~~~~~~~~~l~~~~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~i-~~li~~l 98 (283)
T d2rhwa1 21 NIHYNEAG-NGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAV-KGLMDAL 98 (283)
T ss_dssp EEEEEEEC-CSSEEEEECCCSTTCCHHHHHTTTHHHHHHTTCEEEEECCTTSTTSCCCCCSSCHHHHHHHHH-HHHHHHH
T ss_pred EEEEEEEc-CCCeEEEECCCCCChhHHHHHHHHHHHHHHCCCEEEEEeCCCCcccccccccccccchhhhhc-ccccccc
Confidence 47777766 568999999998776654445555444445999999999999999987776667788889999 6999999
Q ss_pred CCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchh----hHHHHHhhcCCCCCchhhhhhhhHHHHHH
Q 012188 251 KVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQA----SQYVMRKVAPRRVWPLIAFGASMACWYEH 326 (468)
Q Consensus 251 ~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (468)
+.++++++||||||.+++.+|.++|++++++|+++|........... ........... . ...
T Consensus 99 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----------~~~ 164 (283)
T d2rhwa1 99 DIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEP---S-----------YET 164 (283)
T ss_dssp TCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSC---C-----------HHH
T ss_pred cccccccccccchHHHHHHHHHHhhhhcceEEEeCCCcCCcchhhhhhHHHHHHHHHHhhhh---h-----------hhh
Confidence 99999999999999999999999999999999999765432211110 11111110000 0 000
Q ss_pred HhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeC
Q 012188 327 ISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGE 406 (468)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~ 406 (468)
................+...+... ..+.... .............. .........+.++++|+++++|+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~l~~i~~P~lii~G~ 232 (283)
T d2rhwa1 165 LKQMLQVFLYDQSLITEELLQGRW---------EAIQRQP-EHLKNFLISAQKAP--LSTWDVTARLGEIKAKTFITWGR 232 (283)
T ss_dssp HHHHHHHHCSCGGGCCHHHHHHHH---------HHHHHCH-HHHHHHHHHHHHSC--GGGGCCGGGGGGCCSCEEEEEET
T ss_pred HHHHHHHhhcccccCcHHHHHHHH---------HHhhhhh-hhhhhhhhhhhhhh--ccccchHHHHhhCCCCEEEEEeC
Confidence 000000000000000010000000 0000000 00000000000000 00111223357889999999999
Q ss_pred CCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 407 DDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 407 ~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
+|.++|++.++.+.+.+|++++++++++||+++. |+|+++++.|.+||++
T Consensus 233 ~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~FLk~ 282 (283)
T d2rhwa1 233 DDRFVPLDHGLKLLWNIDDARLHVFSKCGHWAQW-EHADEFNRLVIDFLRH 282 (283)
T ss_dssp TCSSSCTHHHHHHHHHSSSEEEEEESSCCSCHHH-HTHHHHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHhCCCCEEEEECCCCCchHH-hCHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999997 8999999999999986
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Probab=100.00 E-value=2.4e-32 Score=255.65 Aligned_cols=258 Identities=19% Similarity=0.276 Sum_probs=166.2
Q ss_pred CCceeEEEecC-CCCeEEEEecCCCCcc---chhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCC----CCHHHHHH
Q 012188 169 CDCKFCTCWSS-SSRDTLFVKTQGPSAF---WTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSL----YTVREHLD 240 (468)
Q Consensus 169 ~~~~~~~~~~~-~~p~vl~lHG~g~s~~---~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~----~t~~~~~~ 240 (468)
...+++..+++ ++|+|||+||++++.. .|..+++.|+ ++|+|+++|+||||.|+.+.... ++++++++
T Consensus 13 ~~~~h~~~~G~~~~p~ivllHG~~~~~~~~~~~~~~~~~L~----~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~ 88 (281)
T d1c4xa_ 13 TLASHALVAGDPQSPAVVLLHGAGPGAHAASNWRPIIPDLA----ENFFVVAPDLIGFGQSEYPETYPGHIMSWVGMRVE 88 (281)
T ss_dssp TSCEEEEEESCTTSCEEEEECCCSTTCCHHHHHGGGHHHHH----TTSEEEEECCTTSTTSCCCSSCCSSHHHHHHHHHH
T ss_pred CEEEEEEEEecCCCCEEEEECCCCCCCcHHHHHHHHHHHHh----CCCEEEEEeCCCCccccccccccccchhhHHHhhh
Confidence 34567777754 6899999999876432 2445778887 89999999999999998765422 34567788
Q ss_pred HHHHHHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhh
Q 012188 241 MIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASM 320 (468)
Q Consensus 241 di~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (468)
++ ..++++++.++++++||||||.+++.+|.++|++|+++|++++....................... .
T Consensus 89 ~i-~~~i~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~----------~ 157 (281)
T d1c4xa_ 89 QI-LGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELARLLAFYADPR----------L 157 (281)
T ss_dssp HH-HHHHHHHTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHHHHHHTGGGSCC----------H
T ss_pred hc-cccccccccccceeccccccccccccccccccccccceEEeccccCccccchhHHHHHHHhhhhcc----------c
Confidence 88 588899999999999999999999999999999999999999865543333222222211111100 0
Q ss_pred HHHHHHHhhHHHHHhhccchhHHHHHH---HHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCC
Q 012188 321 ACWYEHISRTICLLICKNHRVWEFLAK---LVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVK 397 (468)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 397 (468)
..+...+...... ............. .......... .............. .......+.+++
T Consensus 158 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~-~~~~~~~l~~i~ 222 (281)
T d1c4xa_ 158 TPYRELIHSFVYD-PENFPGMEEIVKSRFEVANDPEVRRI-------------QEVMFESMKAGMES-LVIPPATLGRLP 222 (281)
T ss_dssp HHHHHHHHTTSSC-STTCTTHHHHHHHHHHHHHCHHHHHH-------------HHHHHHHHSSCCGG-GCCCHHHHTTCC
T ss_pred chhhhhhhhhccc-ccccchhhhHHHHHhhhcccchhhhh-------------hhhhhhHHhhhhhh-hccchhhhhhhc
Confidence 0000000000000 0000000000000 0000000000 00000000010111 112233357889
Q ss_pred CcEEEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 398 CDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 398 ~PvLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
+|+|+++|++|.++|++.++.+.+.+|++++++++++||++++ |+|+++++.|.+||+.
T Consensus 223 ~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~Fl~s 281 (281)
T d1c4xa_ 223 HDVLVFHGRQDRIVPLDTSLYLTKHLKHAELVVLDRCGHWAQL-ERWDAMGPMLMEHFRA 281 (281)
T ss_dssp SCEEEEEETTCSSSCTHHHHHHHHHCSSEEEEEESSCCSCHHH-HSHHHHHHHHHHHHHC
T ss_pred cceEEEEeCCCCCcCHHHHHHHHHHCCCCEEEEECCCCCchHH-hCHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999997 9999999999999963
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Probab=100.00 E-value=3.2e-32 Score=255.37 Aligned_cols=268 Identities=15% Similarity=0.147 Sum_probs=174.0
Q ss_pred CCCceeEEEecC-CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 012188 168 DCDCKFCTCWSS-SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSV 246 (468)
Q Consensus 168 d~~~~~~~~~~~-~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l 246 (468)
+|..++|..|++ ++|+|||+||++++...|..+++.|+ ++|+|+++|+||||.|+.+. ..++.+++++++ ..+
T Consensus 15 ~g~~i~y~~~G~~~~p~lvllHG~~~~~~~~~~~~~~L~----~~~~vi~~d~~G~G~S~~~~-~~~~~~~~~~~l-~~~ 88 (291)
T d1bn7a_ 15 LGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVA----PSHRCIAPDLIGMGKSDKPD-LDYFFDDHVRYL-DAF 88 (291)
T ss_dssp TTEEEEEEEESCSSSSCEEEECCTTCCGGGGTTTHHHHT----TTSCEEEECCTTSTTSCCCS-CCCCHHHHHHHH-HHH
T ss_pred CCEEEEEEEeCCCCCCeEEEECCCCCCHHHHHHHHHHHh----cCCEEEEEeCCCCccccccc-cccchhHHHHHH-hhh
Confidence 677899999975 57999999999988877777888887 89999999999999998765 468999999999 799
Q ss_pred hcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchh--hHHHHHhhcCCCCCchhhhhhhhHHHH
Q 012188 247 IEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQA--SQYVMRKVAPRRVWPLIAFGASMACWY 324 (468)
Q Consensus 247 ~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (468)
+++++.++++++||||||.+++.++.++|+++++++++++........... .................. ... .
T Consensus 89 l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~ 163 (291)
T d1bn7a_ 89 IEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPIPTWDEWPEFARETFQAFRTADVGRELI--IDQ---N 163 (291)
T ss_dssp HHHTTCCSEEEEEEHHHHHHHHHHHHHCGGGEEEEEEEEECCCBCSGGGSCHHHHHHHHHHTSTTHHHHHH--TTS---C
T ss_pred hhhhccccccccccccccchhHHHHHhCCcceeeeeeeccccCCccchhhhhhhhhHHHHHhhhhhHHHhh--hhh---h
Confidence 999999999999999999999999999999999999998654432221111 111111110000000000 000 0
Q ss_pred HHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhccccc-----ccchHHHhhccCCCc
Q 012188 325 EHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANK-----LDGYLDAVRNHVKCD 399 (468)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~i~~P 399 (468)
......... ........... ..+ .......................... ........+.++++|
T Consensus 164 ~~~~~~~~~-~~~~~~~~~~~---------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 232 (291)
T d1bn7a_ 164 AFIEGVLPK-CVVRPLTEVEM---------DHY-REPFLKPVDREPLWRFPNEIPIAGEPANIVALVEAYMNWLHQSPVP 232 (291)
T ss_dssp HHHHTHHHH-TCSSCCCHHHH---------HHH-HGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSC
T ss_pred hhHHhhhhh-hccccchHHHH---------HHH-HHHhcchhhhHHHHHHHHHhhhhhhhchhhhhhhhhhhhhhcCCCC
Confidence 000000000 00000000000 000 00000000000000000000000000 001122334678999
Q ss_pred EEEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 400 VNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 400 vLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
+++++|++|.++|++.++.+.+.+|++++++++++||+++. |+|+++++.|.+||+..
T Consensus 233 ~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~p~~v~~~i~~fL~~l 290 (291)
T d1bn7a_ 233 KLLFWGTPGVLIPPAEAARLAESLPNCKTVDIGPGLHYLQE-DNPDLIGSEIARWLPGL 290 (291)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHSTTEEEEEEEEESSCGGG-TCHHHHHHHHHHHSGGG
T ss_pred EEEEEeCCCCCcCHHHHHHHHHHCCCCEEEEECCCCCchHH-hCHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999997 99999999999999763
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Probab=99.98 E-value=1e-31 Score=249.07 Aligned_cols=254 Identities=19% Similarity=0.236 Sum_probs=165.1
Q ss_pred CCCceeEEEecCCCCeEEEEecCCCCcc---chhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 012188 168 DCDCKFCTCWSSSSRDTLFVKTQGPSAF---WTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEK 244 (468)
Q Consensus 168 d~~~~~~~~~~~~~p~vl~lHG~g~s~~---~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~ 244 (468)
||..++|..++. +|||||+||++++.. .|..+++.|+ ++|+|+++|+||||.|+.+. ..++.+++++++ .
T Consensus 10 dg~~l~y~~~G~-g~~vvllHG~~~~~~~~~~~~~~~~~l~----~~~~v~~~D~~G~G~S~~~~-~~~~~~~~~~~~-~ 82 (268)
T d1j1ia_ 10 GGVETRYLEAGK-GQPVILIHGGGAGAESEGNWRNVIPILA----RHYRVIAMDMLGFGKTAKPD-IEYTQDRRIRHL-H 82 (268)
T ss_dssp TTEEEEEEEECC-SSEEEEECCCSTTCCHHHHHTTTHHHHT----TTSEEEEECCTTSTTSCCCS-SCCCHHHHHHHH-H
T ss_pred CCEEEEEEEEcC-CCeEEEECCCCCCccHHHHHHHHHHHHh----cCCEEEEEcccccccccCCc-cccccccccccc-h
Confidence 667788888774 588999999886433 2345677776 89999999999999998765 357899999999 6
Q ss_pred HHhcccCCc-eEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHH
Q 012188 245 SVIEPNKVK-SFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACW 323 (468)
Q Consensus 245 ~l~~~l~~~-~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (468)
++++.++.+ +++++||||||.+++.+|.++|++|+++|+++|+........ .. ....... ... ......
T Consensus 83 ~~i~~l~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~----~~-~~~~~~~-~~~----~~~~~~ 152 (268)
T d1j1ia_ 83 DFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHE----DL-RPIINYD-FTR----EGMVHL 152 (268)
T ss_dssp HHHHHSCCSSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC---------------CC-SCH----HHHHHH
T ss_pred hhHHHhhhcccceeeeccccccccchhhccChHhhheeeecCCCccccccch----hh-hhhhhhh-hhh----hhhHHH
Confidence 899999874 799999999999999999999999999999998654322211 00 0000000 000 000000
Q ss_pred HHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEE
Q 012188 324 YEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVF 403 (468)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii 403 (468)
...... ......................... +............ .....+.+.++++|+++|
T Consensus 153 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~--~~~~~~~l~~i~~P~l~i 214 (268)
T d1j1ia_ 153 VKALTN---DGFKIDDAMINSRYTYATDEATRKA-------------YVATMQWIREQGG--LFYDPEFIRKVQVPTLVV 214 (268)
T ss_dssp HHHHSC---TTCCCCHHHHHHHHHHHHSHHHHHH-------------HHHHHHHHHHHTS--SBCCHHHHTTCCSCEEEE
T ss_pred HHHHhh---hhhhhhhhhhHHHHHhhhhhhhhhh-------------hhhhhhhhhcccc--ccchhhhHhhCCCCEEEE
Confidence 000000 0000000000000000000000000 0000000000000 111123457889999999
Q ss_pred eeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 404 HGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 404 ~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
+|++|.++|++.++.+.+.+|++++++++++||+++. |+|+++++.|.+||.+
T Consensus 215 ~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~FL~~ 267 (268)
T d1j1ia_ 215 QGKDDKVVPVETAYKFLDLIDDSWGYIIPHCGHWAMI-EHPEDFANATLSFLSL 267 (268)
T ss_dssp EETTCSSSCHHHHHHHHHHCTTEEEEEESSCCSCHHH-HSHHHHHHHHHHHHHH
T ss_pred EeCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCchHH-hCHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999997 8999999999999975
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Probab=99.98 E-value=1.7e-31 Score=254.58 Aligned_cols=120 Identities=20% Similarity=0.188 Sum_probs=103.3
Q ss_pred cCCCCceeEEEecC-CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCC-CCCCHHHHHHHHH
Q 012188 166 WSDCDCKFCTCWSS-SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD-SLYTVREHLDMIE 243 (468)
Q Consensus 166 ~~d~~~~~~~~~~~-~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~-~~~t~~~~~~di~ 243 (468)
..||..++|+.+++ ++|||||+||++++...+......+. ++|+|+++|+||||.|+.+.. ..+++.++++|+
T Consensus 18 ~~dg~~i~y~~~G~~~g~pvvllHG~~g~~~~~~~~~~~l~----~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~dl- 92 (313)
T d1azwa_ 18 VDDRHTLYFEQCGNPHGKPVVMLHGGPGGGCNDKMRRFHDP----AKYRIVLFDQRGSGRSTPHADLVDNTTWDLVADI- 92 (313)
T ss_dssp CSSSCEEEEEEEECTTSEEEEEECSTTTTCCCGGGGGGSCT----TTEEEEEECCTTSTTSBSTTCCTTCCHHHHHHHH-
T ss_pred eCCCcEEEEEEecCCCCCEEEEECCCCCCccchHHHhHHhh----cCCEEEEEeccccCCCCccccccchhHHHHHHHH-
Confidence 35788899999864 67899999999877665554555444 899999999999999986543 668999999999
Q ss_pred HHHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCC
Q 012188 244 KSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 244 ~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~ 290 (468)
..+++++++++++|+||||||.+++.+|.++|+++++++++++....
T Consensus 93 ~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv~~~~~~~~ 139 (313)
T d1azwa_ 93 ERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLLR 139 (313)
T ss_dssp HHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCC
T ss_pred HHHHHhhccccceeEEecCCcHHHHHHHHHhhhceeeeeEecccccc
Confidence 69999999999999999999999999999999999999999976543
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.98 E-value=4.3e-32 Score=253.50 Aligned_cols=265 Identities=16% Similarity=0.155 Sum_probs=163.4
Q ss_pred CCCceeEEEecC--CCCeEEEEecCCCCc-cchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 012188 168 DCDCKFCTCWSS--SSRDTLFVKTQGPSA-FWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEK 244 (468)
Q Consensus 168 d~~~~~~~~~~~--~~p~vl~lHG~g~s~-~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~ 244 (468)
||..++|..++. ++|+||++||++++. .|+.. +..+. ++||+|+++|+||||.|+.+....++++++++++ .
T Consensus 10 ~g~~i~y~~~g~~~~~~~iv~lHG~~g~~~~~~~~-~~~~~---~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l-~ 84 (290)
T d1mtza_ 10 NGIYIYYKLCKAPEEKAKLMTMHGGPGMSHDYLLS-LRDMT---KEGITVLFYDQFGCGRSEEPDQSKFTIDYGVEEA-E 84 (290)
T ss_dssp TTEEEEEEEECCSSCSEEEEEECCTTTCCSGGGGG-GGGGG---GGTEEEEEECCTTSTTSCCCCGGGCSHHHHHHHH-H
T ss_pred CCEEEEEEEcCCCCCCCeEEEECCCCCchHHHHHH-HHHHH---HCCCEEEEEeCCCCccccccccccccccchhhhh-h
Confidence 566788888864 457899999986644 45543 44333 3899999999999999988766678999999999 6
Q ss_pred HHhccc-CCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHH
Q 012188 245 SVIEPN-KVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACW 323 (468)
Q Consensus 245 ~l~~~l-~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (468)
.+++++ +.++++++||||||.+++.+|.++|++|+++|++++...... ............ ... .
T Consensus 85 ~ll~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~----~~~~~~~~~~~~---~~~-----~--- 149 (290)
T d1mtza_ 85 ALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPL----TVKEMNRLIDEL---PAK-----Y--- 149 (290)
T ss_dssp HHHHHHHTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHH----HHHHHHHHHHTS---CHH-----H---
T ss_pred hhhcccccccccceecccccchhhhhhhhcChhhheeeeecccccCccc----chhhhhhhhhhh---hHH-----H---
Confidence 888886 789999999999999999999999999999999987643200 000110000000 000 0
Q ss_pred HHHHhhHHHHHhhccchhHHHHHHHHhhhH-----HHHHhhhccccccchhHHhhHhHHHh------cccccccchHHHh
Q 012188 324 YEHISRTICLLICKNHRVWEFLAKLVTRNR-----IRTFLLEGFFCHTHNAAWHTLHNIIC------GTANKLDGYLDAV 392 (468)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 392 (468)
.............................. ........+ ............. .............
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (290)
T d1mtza_ 150 RDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSL----EYAERRNVYRIMNGPNEFTITGTIKDWDITDK 225 (290)
T ss_dssp HHHHHHHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHH----HHHHHSSHHHHHTCSBTTBCCSTTTTCBCTTT
T ss_pred HHHHHHhhhhccccchhHHHHHHHHhhhhhcccccchHHHHHHH----HHHhhhhhhhhhcchhHHhHhhhhhcccHHHH
Confidence 000000000000000000000000000000 000000000 0000000000000 0001111223334
Q ss_pred hccCCCcEEEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 393 RNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 393 ~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
..++++|+++++|++|.++| +.++.+.+.+|++++++++++||+++. |+|+++++.|.+||.+.
T Consensus 226 ~~~i~~P~l~i~G~~D~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~FL~~h 289 (290)
T d1mtza_ 226 ISAIKIPTLITVGEYDEVTP-NVARVIHEKIAGSELHVFRDCSHLTMW-EDREGYNKLLSDFILKH 289 (290)
T ss_dssp GGGCCSCEEEEEETTCSSCH-HHHHHHHHHSTTCEEEEETTCCSCHHH-HSHHHHHHHHHHHHHTC
T ss_pred hhcccceEEEEEeCCCCCCH-HHHHHHHHHCCCCEEEEECCCCCchHH-hCHHHHHHHHHHHHHHh
Confidence 57889999999999998765 678899999999999999999999998 89999999999999873
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=99.97 E-value=1e-30 Score=243.10 Aligned_cols=261 Identities=15% Similarity=0.143 Sum_probs=159.3
Q ss_pred eeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccC
Q 012188 172 KFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNK 251 (468)
Q Consensus 172 ~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~ 251 (468)
++|..++ ++|||||+||++++...|..+++.|. ++||+|+++|+||||.|+.... .++++++++++ ..++++++
T Consensus 15 i~y~~~G-~G~~ivllHG~~~~~~~~~~~~~~l~---~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~dl-~~~l~~l~ 88 (277)
T d1brta_ 15 LYYEDHG-TGQPVVLIHGFPLSGHSWERQSAALL---DAGYRVITYDRRGFGQSSQPTT-GYDYDTFAADL-NTVLETLD 88 (277)
T ss_dssp EEEEEEC-SSSEEEEECCTTCCGGGGHHHHHHHH---HTTCEEEEECCTTSTTSCCCSS-CCSHHHHHHHH-HHHHHHHT
T ss_pred EEEEEEc-cCCeEEEECCCCCCHHHHHHHHHHHH---hCCCEEEEEeCCCCCccccccc-ccchhhhhhhh-hhhhhccC
Confidence 5666655 57899999999887776666777664 4799999999999999986553 58999999999 69999999
Q ss_pred CceEEEEEEcccH-HHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhH
Q 012188 252 VKSFHIVAHSLGC-ILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRT 330 (468)
Q Consensus 252 ~~~i~lvGhS~Gg-~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (468)
.++++++|||||| .++..++.++|++|+++|++++........... .....+..................
T Consensus 89 ~~~~~lvGhS~G~~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~ 159 (277)
T d1brta_ 89 LQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDN---------PDGAAPQEFFDGIVAAVKADRYAF 159 (277)
T ss_dssp CCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTB---------TTCSBCHHHHHHHHHHHHHCHHHH
T ss_pred cccccccccccchhhhhHHHHHhhhcccceEEEecCCCcccccchhh---------hhhhhhhhHHHHHHHhhhccchhh
Confidence 9999999999996 667777888999999999998754321111000 000000000000000000000000
Q ss_pred HHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCc
Q 012188 331 ICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDEL 410 (468)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~ 410 (468)
............+.................... ..... ... . ...........+.++++|+++++|++|.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~---~~~-~-~~~~~~~~~~~l~~i~~P~lii~g~~D~~ 230 (277)
T d1brta_ 160 YTGFFNDFYNLDENLGTRISEEAVRNSWNTAAS----GGFFA---AAA-A-PTTWYTDFRADIPRIDVPALILHGTGDRT 230 (277)
T ss_dssp HHHHHHHHTTHHHHBTTTBCHHHHHHHHHHHHH----SCHHH---HHH-G-GGGTTCCCTTTGGGCCSCEEEEEETTCSS
T ss_pred hhhccccccccchhhhhhhhHHHhhhhhcccch----hhhhh---hhh-h-hhhhhhhHHHHHHhcCccceeEeecCCCC
Confidence 000000000000000000000000000000000 00000 000 0 00001112234578899999999999999
Q ss_pred cChhh-HHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 411 IPVEC-SYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 411 vp~~~-~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
++.+. .+.+.+.+|++++++++|+||+++. |+|+++++.|.+||++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fL~k 277 (277)
T d1brta_ 231 LPIENTARVFHKALPSAEYVEVEGAPHGLLW-THAEEVNTALLAFLAK 277 (277)
T ss_dssp SCGGGTHHHHHHHCTTSEEEEETTCCTTHHH-HTHHHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHhCCCCEEEEECCCCCchHH-hCHHHHHHHHHHHHCc
Confidence 99876 5667788999999999999999997 8999999999999975
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Probab=99.97 E-value=2e-31 Score=250.04 Aligned_cols=270 Identities=13% Similarity=0.100 Sum_probs=163.9
Q ss_pred CCCceeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCC---CCCCHHHHHHHHHH
Q 012188 168 DCDCKFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD---SLYTVREHLDMIEK 244 (468)
Q Consensus 168 d~~~~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~---~~~t~~~~~~di~~ 244 (468)
++..++|..++ ++|+|||+||++++...|..+++.|+ ++|+|+++|+||||.|+.... ..++++++++++ .
T Consensus 16 ~~~~l~y~~~G-~gp~vv~lHG~~~~~~~~~~~~~~l~----~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~a~~~-~ 89 (293)
T d1ehya_ 16 PDVKIHYVREG-AGPTLLLLHGWPGFWWEWSKVIGPLA----EHYDVIVPDLRGFGDSEKPDLNDLSKYSLDKAADDQ-A 89 (293)
T ss_dssp SSCEEEEEEEE-CSSEEEEECCSSCCGGGGHHHHHHHH----TTSEEEEECCTTSTTSCCCCTTCGGGGCHHHHHHHH-H
T ss_pred CCEEEEEEEEC-CCCeEEEECCCCCCHHHHHHHHHHHh----cCCEEEEecCCcccCCccccccccccccchhhhhHH-H
Confidence 45668887776 57999999999988887777889888 799999999999999976543 356889999999 6
Q ss_pred HHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHH----HhhcCCCCCchhhhhhhh
Q 012188 245 SVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVM----RKVAPRRVWPLIAFGASM 320 (468)
Q Consensus 245 ~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 320 (468)
.++++++.++++++||||||.+++.+|.++|+++.++|++++................ ....... ..........
T Consensus 90 ~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 168 (293)
T d1ehya_ 90 ALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQLD-MAVEVVGSSR 168 (293)
T ss_dssp HHHHHTTCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-----------CCHHHHHTTCH-HHHHHHTSCH
T ss_pred hhhhhcCccccccccccccccchhcccccCccccceeeeeeccCccccchhhhhhhhhhhhhhhhhccc-hhhhhhccch
Confidence 9999999999999999999999999999999999999999976533111100000000 0000000 0000000000
Q ss_pred HHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcE
Q 012188 321 ACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDV 400 (468)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pv 400 (468)
......+................ .....+....................... ............+++|+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~Pv 237 (293)
T d1ehya_ 169 EVCKKYFKHFFDHWSYRDELLTE--------EELEVHVDNCMKPDNIHGGFNYYRANIRP---DAALWTDLDHTMSDLPV 237 (293)
T ss_dssp HHHHHHHHHHHHHTSSSSCCSCH--------HHHHHHHHHHTSTTHHHHHHHHHHHHSSS---SCCCCCTGGGSCBCSCE
T ss_pred hHHHHHHHHhhhhcccccccccH--------HHHHhhhhccccchhhhhhhhhhhhcccc---chhhhhhhhhhccCCce
Confidence 00000000000000000000000 00000100000000000000111111111 11111111235678999
Q ss_pred EEEeeCCCCccChhhHH-HHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHh
Q 012188 401 NVFHGEDDELIPVECSY-NVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWR 456 (468)
Q Consensus 401 Lii~G~~D~~vp~~~~~-~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~ 456 (468)
++|+|++|.++|.+... .+.+..|++++++++++||++++ |+|+++++.|.+|++
T Consensus 238 lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~Pe~~~~~I~~Ffr 293 (293)
T d1ehya_ 238 TMIWGLGDTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMV-EKPEIAIDRIKTAFR 293 (293)
T ss_dssp EEEEECCSSCCTTHHHHHHHHHHBSSEEEEEETTCCSCHHH-HCHHHHHHHHHHHCC
T ss_pred EEEEeCCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCchHH-HCHHHHHHHHHHhhC
Confidence 99999999999987654 56667799999999999999998 999999999999974
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.97 E-value=4e-31 Score=251.20 Aligned_cols=267 Identities=17% Similarity=0.209 Sum_probs=172.3
Q ss_pred CCCCceeEEEecCC--CCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCC-CCCCHHHHHHHHH
Q 012188 167 SDCDCKFCTCWSSS--SRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD-SLYTVREHLDMIE 243 (468)
Q Consensus 167 ~d~~~~~~~~~~~~--~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~-~~~t~~~~~~di~ 243 (468)
.||.+++|.+++++ .|+|||+||++++...|..+++.|. ++||+|+++|+||||.|+.+.+ ..|++.++++++
T Consensus 31 ~~g~~~~y~~~G~~~~~p~llllHG~~~~~~~~~~~~~~l~---~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~l- 106 (310)
T d1b6ga_ 31 YPGLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFA---ESGARVIAPDFFGFGKSDKPVDEEDYTFEFHRNFL- 106 (310)
T ss_dssp CTTCEEEEEEEECTTCSCEEEECCCTTCCGGGGTTTHHHHH---HTTCEEEEECCTTSTTSCEESCGGGCCHHHHHHHH-
T ss_pred CCCEEEEEEEecCCCCCCEEEEECCCCCchHHHHHHHHHhh---ccCceEEEeeecCccccccccccccccccccccch-
Confidence 47788999999654 4678999999988776666777765 4799999999999999987654 568999999999
Q ss_pred HHHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHH
Q 012188 244 KSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACW 323 (468)
Q Consensus 244 ~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (468)
.++++++++++++|+||||||.+++.+|.++|++|+++|+++++....+..... .......... . ...+
T Consensus 107 ~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P~~V~~lvl~~~~~~~~~~~~~~---~~~~~~~~~~-~-------~~~~ 175 (310)
T d1b6ga_ 107 LALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQPA---FSAFVTQPAD-G-------FTAW 175 (310)
T ss_dssp HHHHHHHTCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTH---HHHTTTSSTT-T-------HHHH
T ss_pred hhhhhhccccccccccceecccccccchhhhccccceEEEEcCccCCCcccchh---HHHHhhcchh-h-------hhhh
Confidence 699999999999999999999999999999999999999999876543322111 1111110000 0 0000
Q ss_pred HHHHhhHHHHHhhccchhHHHHHHHH----hhhHHHHHhhhccccccchhHHhhHhHHHhcccccc----cchHHHhhcc
Q 012188 324 YEHISRTICLLICKNHRVWEFLAKLV----TRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKL----DGYLDAVRNH 395 (468)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 395 (468)
.... ............... .......+ ...+...........+........... .........+
T Consensus 176 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (310)
T d1b6ga_ 176 KYDL-------VTPSDLRLDQFMKRWAPTLTEAEASAY-AAPFPDTSYQAGVRKFPKMVAQRDQACIDISTEAISFWQND 247 (310)
T ss_dssp HHHH-------HSCSSCCHHHHHHHHSTTCCHHHHHHH-HTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT
T ss_pred hhhh-------ccchhhhhhhhhhccCccccHHHHHHH-HhhcchhhhhhcchhhhhhhhhhhhhhhhhhhhhhHHhhcc
Confidence 0000 000000000000000 00000000 000110000111111111110000000 0111223357
Q ss_pred CCCcEEEEeeCCCCccChhhHHHHHHhCCCC-eEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 396 VKCDVNVFHGEDDELIPVECSYNVQRKIPRA-RVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 396 i~~PvLii~G~~D~~vp~~~~~~l~~~~p~~-~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
+++|+++++|++|.+++++..+.+.+.+++. ++++++++||+++. ++|+.+++.|.+||+.
T Consensus 248 ~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~-e~pe~v~~~i~~Fl~~ 309 (310)
T d1b6ga_ 248 WNGQTFMAIGMKDKLLGPDVMYPMKALINGCPEPLEIADAGHFVQE-FGEQVAREALKHFAET 309 (310)
T ss_dssp CCSEEEEEEETTCSSSSHHHHHHHHHHSTTCCCCEEETTCCSCGGG-GHHHHHHHHHHHHHHT
T ss_pred cCCCeEEEEeCCCCCCCHHHHHHHHHhcCCCccEEEECCCcCchhh-hCHHHHHHHHHHHHhC
Confidence 8999999999999999999999999999886 78999999999885 8999999999999986
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=99.97 E-value=1.1e-30 Score=242.72 Aligned_cols=262 Identities=19% Similarity=0.205 Sum_probs=165.4
Q ss_pred CCcCCCCceeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHH
Q 012188 164 PRWSDCDCKFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIE 243 (468)
Q Consensus 164 ~r~~d~~~~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~ 243 (468)
.+..||..++|+.++ ++|||||+||++++...|..+++.|. ++||+|+++|+||||.|+.+.. .++..++++++
T Consensus 3 ~~t~dG~~l~y~~~G-~g~~ivlvHG~~~~~~~~~~~~~~l~---~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~dl- 76 (274)
T d1a8qa_ 3 CTTRDGVEIFYKDWG-QGRPVVFIHGWPLNGDAWQDQLKAVV---DAGYRGIAHDRRGHGHSTPVWD-GYDFDTFADDL- 76 (274)
T ss_dssp EECTTSCEEEEEEEC-SSSEEEEECCTTCCGGGGHHHHHHHH---HTTCEEEEECCTTSTTSCCCSS-CCSHHHHHHHH-
T ss_pred EECcCCCEEEEEEEC-CCCeEEEECCCCCCHHHHHHHHHHHH---HCCCEEEEEeCCCCcccccccc-cccchhhHHHH-
Confidence 456788889999987 56899999999887776666777664 4799999999999999987653 57999999999
Q ss_pred HHHhcccCCceEEEEEEcccHHHHHHHHHh-CCCccceEEEecCCCCCCCCCchh----hHHHHHhhcCCCCCchhhhhh
Q 012188 244 KSVIEPNKVKSFHIVAHSLGCILALALAVK-HPGSVKSLTLLAPPYYPVPKGAQA----SQYVMRKVAPRRVWPLIAFGA 318 (468)
Q Consensus 244 ~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~-~p~~v~~lVl~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 318 (468)
..+++.++.++++++||||||.+++.++++ +|++|++++++++........... ........ .. .
T Consensus 77 ~~~l~~l~~~~~~lvGhS~Gg~~~~~~~a~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~-~ 146 (274)
T d1a8qa_ 77 NDLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDAL---------KN-G 146 (274)
T ss_dssp HHHHHHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHH---------HH-H
T ss_pred HHHHHHhhhhhhcccccccccchHHHHHHHhhhccceeEEEEeccCccchhhhhccchhhHHHHHHH---------Hh-h
Confidence 699999999999999999999988886554 689999999999654321111000 00000000 00 0
Q ss_pred hhHHHHHHHhhHHHHHhhcc---chhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhcc
Q 012188 319 SMACWYEHISRTICLLICKN---HRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNH 395 (468)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (468)
................+... .......... ..... ............ ... ........+.+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~-~~~~~~~~~~~~-~~~------~~~~~~~~l~~ 210 (274)
T d1a8qa_ 147 VLTERSQFWKDTAEGFFSANRPGNKVTQGNKDA--------FWYMA-MAQTIEGGVRCV-DAF------GYTDFTEDLKK 210 (274)
T ss_dssp HHHHHHHHHHHHHHHHTTTTSTTCCCCHHHHHH--------HHHHH-TTSCHHHHHHHH-HHH------HHCCCHHHHTT
T ss_pred hhhhhHHHhhhhhhhhhhccccchhhhhhHHHH--------HHHhh-hccchhhhhhHH-HHh------hccchHHHHHh
Confidence 00000000000000000000 0000000000 00000 000000000000 000 01112234578
Q ss_pred CCCcEEEEeeCCCCccChhh-HHHHHHhCCCCeEEEecCCCccccc-cCcHHHHHHHHHHHHhh
Q 012188 396 VKCDVNVFHGEDDELIPVEC-SYNVQRKIPRARVKVIEKKDHITIV-VGRQKTFARELEEIWRS 457 (468)
Q Consensus 396 i~~PvLii~G~~D~~vp~~~-~~~l~~~~p~~~l~~i~~~gH~~~~-~e~p~~~~~~i~~fl~~ 457 (468)
+++|+++|+|++|.++|.+. .+.+.+.+|++++++++++||++++ .++|++|++.|.+||++
T Consensus 211 i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~~~~~p~~~~~~i~~FL~k 274 (274)
T d1a8qa_ 211 FDIPTLVVHGDDDQVVPIDATGRKSAQIIPNAELKVYEGSSHGIAMVPGDKEKFNRDLLEFLNK 274 (274)
T ss_dssp CCSCEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTTTTSTTHHHHHHHHHHHHHTC
T ss_pred ccceeeeeccCCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCcccccccCHHHHHHHHHHHHCc
Confidence 89999999999999999876 4677788999999999999998875 26799999999999974
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Probab=99.97 E-value=2.4e-30 Score=240.17 Aligned_cols=261 Identities=20% Similarity=0.186 Sum_probs=166.2
Q ss_pred CcCCCCceeEEEecC-CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHH
Q 012188 165 RWSDCDCKFCTCWSS-SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIE 243 (468)
Q Consensus 165 r~~d~~~~~~~~~~~-~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~ 243 (468)
+.+||..++|..|++ ++|+|||+||++++...|..+++.|. ++||+|+++|+||||.|+.+.. .++.+++++++
T Consensus 4 ~~~dG~~l~y~~~G~~~~~~vv~lHG~~~~~~~~~~~~~~l~---~~g~~vi~~D~~G~G~s~~~~~-~~~~~~~~~~~- 78 (275)
T d1a88a_ 4 TTSDGTNIFYKDWGPRDGLPVVFHHGWPLSADDWDNQMLFFL---SHGYRVIAHDRRGHGRSDQPST-GHDMDTYAADV- 78 (275)
T ss_dssp ECTTSCEEEEEEESCTTSCEEEEECCTTCCGGGGHHHHHHHH---HTTCEEEEECCTTSTTSCCCSS-CCSHHHHHHHH-
T ss_pred EecCCCEEEEEEecCCCCCeEEEECCCCCCHHHHHHHHHHHH---hCCCEEEEEecccccccccccc-ccccccccccc-
Confidence 346888999999975 57899999999887776656777664 4899999999999999987653 68999999999
Q ss_pred HHHhcccCCceEEEEEEcc-cHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHH
Q 012188 244 KSVIEPNKVKSFHIVAHSL-GCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMAC 322 (468)
Q Consensus 244 ~~l~~~l~~~~i~lvGhS~-Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (468)
..+++.++.++++++|||+ ||.+++.+|.++|++|+++|++++........... ........+......
T Consensus 79 ~~~l~~l~~~~~~~vg~s~~G~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~ 148 (275)
T d1a88a_ 79 AALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTN----------PDGLPLEVFDEFRAA 148 (275)
T ss_dssp HHHHHHHTCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTB----------TTSBCHHHHHHHHHH
T ss_pred ccccccccccccccccccccccchhhcccccCcchhhhhhhhcccccccccchhh----------hhhhhhhhhhhhhhh
Confidence 6999999999999999997 66788888999999999999999653221111000 000000000000000
Q ss_pred HHHH----HhhHHHHHh----hccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhc
Q 012188 323 WYEH----ISRTICLLI----CKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRN 394 (468)
Q Consensus 323 ~~~~----~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (468)
.... ......... .......+..... ....... .......... ... ........+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~-~~~~~~~~~~-~~~------~~~~~~~~l~ 212 (275)
T d1a88a_ 149 LAANRAQFYIDVPSGPFYGFNREGATVSQGLIDH--------WWLQGMM-GAANAHYECI-AAF------SETDFTDDLK 212 (275)
T ss_dssp HHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHH--------HHHHHHH-SCHHHHHHHH-HHH------HHCCCHHHHH
T ss_pred hhhhhHHHHHhhhhhhhhhcccchhhHHHHHHHH--------HHHhhcc-cchHHHHHHH-HHh------hhhhhhHHHH
Confidence 0000 000000000 0000000000000 0000000 0000000000 000 0111223346
Q ss_pred cCCCcEEEEeeCCCCccChhh-HHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 395 HVKCDVNVFHGEDDELIPVEC-SYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 395 ~i~~PvLii~G~~D~~vp~~~-~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
++++|+++++|++|.++|.+. .+.+.+.+|++++++++++||+++. |+|+++++.|.+||+.
T Consensus 213 ~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~Fl~s 275 (275)
T d1a88a_ 213 RIDVPVLVAHGTDDQVVPYADAAPKSAELLANATLKSYEGLPHGMLS-THPEVLNPDLLAFVKS 275 (275)
T ss_dssp HCCSCEEEEEETTCSSSCSTTTHHHHHHHSTTEEEEEETTCCTTHHH-HCHHHHHHHHHHHHHC
T ss_pred hhccccceeecCCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCchHH-hCHHHHHHHHHHHHcC
Confidence 789999999999999998765 5677778999999999999999998 8999999999999973
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Probab=99.97 E-value=2.9e-30 Score=240.35 Aligned_cols=260 Identities=15% Similarity=0.183 Sum_probs=160.3
Q ss_pred ceeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhccc
Q 012188 171 CKFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPN 250 (468)
Q Consensus 171 ~~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l 250 (468)
.++|+.++ ++|||||+||++.+...|..+++.|. ++||+|+++|+||||.|+.+. ..++++++++++ .++++++
T Consensus 14 ~i~y~~~G-~g~~illlHG~~~~~~~~~~~~~~l~---~~~~~vi~~D~~G~G~S~~~~-~~~~~~~~~~di-~~~i~~l 87 (279)
T d1hkha_ 14 ELYYEDQG-SGQPVVLIHGYPLDGHSWERQTRELL---AQGYRVITYDRRGFGGSSKVN-TGYDYDTFAADL-HTVLETL 87 (279)
T ss_dssp EEEEEEES-SSEEEEEECCTTCCGGGGHHHHHHHH---HTTEEEEEECCTTSTTSCCCS-SCCSHHHHHHHH-HHHHHHH
T ss_pred EEEEEEEc-cCCeEEEECCCCCCHHHHHHHHHHHH---HCCCEEEEEechhhCCccccc-cccchhhhhhhh-hhhhhhc
Confidence 46777766 57899999999887776656666553 389999999999999998765 468999999999 6999999
Q ss_pred CCceEEEEEEcccH-HHHHHHHHhCCCccceEEEecCCCCCCCCCchh----hHHHHHhhcCCCCCchhhhhhhhHHHHH
Q 012188 251 KVKSFHIVAHSLGC-ILALALAVKHPGSVKSLTLLAPPYYPVPKGAQA----SQYVMRKVAPRRVWPLIAFGASMACWYE 325 (468)
Q Consensus 251 ~~~~i~lvGhS~Gg-~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (468)
+.++++++|||||| .+++.+|.++|++|.++++++++.......... .......... ........+..
T Consensus 88 ~~~~~~lvGhS~Gg~~~a~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~ 160 (279)
T d1hkha_ 88 DLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEA-------AAKGDRFAWFT 160 (279)
T ss_dssp TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHH-------HHHHCHHHHHH
T ss_pred CcCccccccccccccchhhhhccccccccceeEEeeccCCccccchhhhhhhhHHHHHHHHH-------hhhhhhhhhhh
Confidence 99999999999996 677778888999999999998754321111000 0000000000 00000000000
Q ss_pred HHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEee
Q 012188 326 HISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHG 405 (468)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G 405 (468)
....... ..................... .........+...... .......+ ..++.+++|+++++|
T Consensus 161 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~P~l~i~G 227 (279)
T d1hkha_ 161 DFYKNFY-------NLDENLGSRISEQAVTGSWNV-AIGSAPVAAYAVVPAW----IEDFRSDV-EAVRAAGKPTLILHG 227 (279)
T ss_dssp HHHHHHH-------THHHHBTTTBCHHHHHHHHHH-HHTSCTTHHHHTHHHH----TCBCHHHH-HHHHHHCCCEEEEEE
T ss_pred hhhhhhc-------ccchhhhhhhhhhhhhhhhhh-hcccchhhhhhhhhhh----hcccccch-hhhcccCCceEEEEc
Confidence 0000000 000000000000000000000 0000000111111111 01111111 223567899999999
Q ss_pred CCCCccChh-hHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 406 EDDELIPVE-CSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 406 ~~D~~vp~~-~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
++|.++|.+ ..+.+.+.+|++++++++++||+++. |+|+++++.|.+||++
T Consensus 228 ~~D~~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~-e~p~~v~~~i~~fl~k 279 (279)
T d1hkha_ 228 TKDNILPIDATARRFHQAVPEADYVEVEGAPHGLLW-THADEVNAALKTFLAK 279 (279)
T ss_dssp TTCSSSCTTTTHHHHHHHCTTSEEEEETTCCTTHHH-HTHHHHHHHHHHHHHC
T ss_pred CCCCccCHHHHHHHHHHhCCCCEEEEECCCCCchHH-hCHHHHHHHHHHHHCc
Confidence 999999875 56788888999999999999999997 8999999999999975
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=2.9e-30 Score=237.96 Aligned_cols=251 Identities=16% Similarity=0.161 Sum_probs=157.7
Q ss_pred eeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccC
Q 012188 172 KFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNK 251 (468)
Q Consensus 172 ~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~ 251 (468)
++|+..+.++++|||+||++++...|..+.+.|+ ++|+|+++|+||||.|+... .+++.++++++ ....
T Consensus 2 i~y~~~G~g~~~lvllHG~~~~~~~~~~~~~~L~----~~~~vi~~D~~G~G~S~~~~--~~~~~d~~~~~-----~~~~ 70 (256)
T d1m33a_ 2 IWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELS----SHFTLHLVDLPGFGRSRGFG--ALSLADMAEAV-----LQQA 70 (256)
T ss_dssp CCEEEECCCSSEEEEECCTTCCGGGGGGTHHHHH----TTSEEEEECCTTSTTCCSCC--CCCHHHHHHHH-----HTTS
T ss_pred eEEEEECCCCCeEEEECCCCCCHHHHHHHHHHHh----CCCEEEEEeCCCCCCccccc--ccccccccccc-----cccc
Confidence 5677777777899999999988777777888888 89999999999999997654 35666655444 3445
Q ss_pred CceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCc--hhhHHHHHhhcCCCCCchhhhhhhhHHHHH-HHh
Q 012188 252 VKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGA--QASQYVMRKVAPRRVWPLIAFGASMACWYE-HIS 328 (468)
Q Consensus 252 ~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 328 (468)
.++++++||||||.+++.+|.++|+++++++++++......... ......... +......... .+.
T Consensus 71 ~~~~~l~GhS~Gg~ia~~~a~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~ 139 (256)
T d1m33a_ 71 PDKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAG-----------FQQQLSDDQQRTVE 139 (256)
T ss_dssp CSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHH-----------HHHHHHHHHHHHHH
T ss_pred ccceeeeecccchHHHHHHHHhCCcccceeeeeecccccccchhhhhhHHHHHHH-----------HHhhhhhhhHHHHH
Confidence 68999999999999999999999999999999986433211110 000000000 0000000000 000
Q ss_pred hHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCC
Q 012188 329 RTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDD 408 (468)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D 408 (468)
+.... ............+... ..... ................. .......++++++|+++|+|++|
T Consensus 140 ~~~~~-~~~~~~~~~~~~~~~~-----~~~~~--~~~~~~~~~~~~~~~~~------~~~~~~~l~~i~~P~lii~G~~D 205 (256)
T d1m33a_ 140 RFLAL-QTMGTETARQDARALK-----KTVLA--LPMPEVDVLNGGLEILK------TVDLRQPLQNVSMPFLRLYGYLD 205 (256)
T ss_dssp HHHHT-TSTTSTTHHHHHHHHH-----HHHHT--SCCCCHHHHHHHHHHHH------HCCCTTGGGGCCSCEEEEEETTC
T ss_pred HHhhh-hhccccchhhHHHHHH-----Hhhhh--cchhhHHHHHhhhhhhc------ccchHHHHHhccCCccccccccC
Confidence 00000 0000000000000000 00000 00000111111111110 01122334788999999999999
Q ss_pred CccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhcC
Q 012188 409 ELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSSS 459 (468)
Q Consensus 409 ~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~ 459 (468)
.++|++.++.+.+.+|++++++++++||++++ |+|++|++.|.+|+++..
T Consensus 206 ~~~p~~~~~~l~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~l~~fl~~ig 255 (256)
T d1m33a_ 206 GLVPRKVVPMLDKLWPHSESYIFAKAAHAPFI-SHPAEFCHLLVALKQRVG 255 (256)
T ss_dssp SSSCGGGCC-CTTTCTTCEEEEETTCCSCHHH-HSHHHHHHHHHHHHTTSC
T ss_pred CCCCHHHHHHHHHHCCCCEEEEECCCCCchHH-HCHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999997 899999999999998754
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.97 E-value=1e-29 Score=235.64 Aligned_cols=258 Identities=17% Similarity=0.171 Sum_probs=162.3
Q ss_pred cCCCCceeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 012188 166 WSDCDCKFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKS 245 (468)
Q Consensus 166 ~~d~~~~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~ 245 (468)
++||..++|..++ ++|||||+||++++...|..+++.|. ++||+|+++|+||||.|+.+.. .++.+++++++ ..
T Consensus 5 ~~dG~~i~y~~~G-~g~pvvllHG~~~~~~~~~~~~~~l~---~~~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~-~~ 78 (273)
T d1a8sa_ 5 TRDGTQIYYKDWG-SGQPIVFSHGWPLNADSWESQMIFLA---AQGYRVIAHDRRGHGRSSQPWS-GNDMDTYADDL-AQ 78 (273)
T ss_dssp CTTSCEEEEEEES-CSSEEEEECCTTCCGGGGHHHHHHHH---HTTCEEEEECCTTSTTSCCCSS-CCSHHHHHHHH-HH
T ss_pred eeCCcEEEEEEEC-CCCeEEEECCCCCCHHHHHHHHHHHH---hCCCEEEEEechhcCccccccc-cccccchHHHH-HH
Confidence 4588889999887 46889999999887776666777774 3799999999999999987654 68999999999 69
Q ss_pred HhcccCCceEEEEEEcccHH-HHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHH
Q 012188 246 VIEPNKVKSFHIVAHSLGCI-LALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWY 324 (468)
Q Consensus 246 l~~~l~~~~i~lvGhS~Gg~-ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (468)
++++++.++.+++|||+||. ++..++.++|+++.+++++++........... . .......+........
T Consensus 79 ~l~~l~~~~~~lvg~s~gG~~~~~~~a~~~p~~v~~~~l~~~~~~~~~~~~~~---------~-~~~~~~~~~~~~~~~~ 148 (273)
T d1a8sa_ 79 LIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEAN---------P-GGLPMEVFDGIRQASL 148 (273)
T ss_dssp HHHHTTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSC---------T-TSBCHHHHHHHHHHHH
T ss_pred HHHhcCccceeeeeeccCCccchhhhhhhhhhccceeEEEecccccccccccc---------c-ccchhhhhhhHHHHHH
Confidence 99999999999999999875 45556667899999999998654221111000 0 0000000000000000
Q ss_pred HHHhhHHHHHhh--------ccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccC
Q 012188 325 EHISRTICLLIC--------KNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHV 396 (468)
Q Consensus 325 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 396 (468)
............ .............. ... ............... ........++++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~-~~~~~~~~~~~~~~~-------~~~~~~~~~~~i 212 (273)
T d1a8sa_ 149 ADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFW--------LQG-MAAGHKNAYDCIKAF-------SETDFTEDLKKI 212 (273)
T ss_dssp HHHHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHH--------HHH-HHSCHHHHHHHHHHH-------HHCCCHHHHHTC
T ss_pred HHHHHHHHHHhhhhhhhcccchhhhhHHHHHHHH--------Hhh-cccchhhhhhhHHHh-------hhhhhhHHHHhh
Confidence 000000000000 00000000000000 000 000000000000000 011223345788
Q ss_pred CCcEEEEeeCCCCccChhhHHHHHH-hCCCCeEEEecCCCccccccCcHHHHHHHHHHHHh
Q 012188 397 KCDVNVFHGEDDELIPVECSYNVQR-KIPRARVKVIEKKDHITIVVGRQKTFARELEEIWR 456 (468)
Q Consensus 397 ~~PvLii~G~~D~~vp~~~~~~l~~-~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~ 456 (468)
++|+++++|++|.++|.+.++.+.+ ..|+++++++|++||++++ ++|+++++.|.+||+
T Consensus 213 ~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~Fl~ 272 (273)
T d1a8sa_ 213 DVPTLVVHGDADQVVPIEASGIASAALVKGSTLKIYSGAPHGLTD-THKDQLNADLLAFIK 272 (273)
T ss_dssp CSCEEEEEETTCSSSCSTTTHHHHHHHSTTCEEEEETTCCSCHHH-HTHHHHHHHHHHHHH
T ss_pred ccceEEEecCCCCCCCHHHHHHHHHHhCCCCEEEEECCCCCchHH-hCHHHHHHHHHHHcC
Confidence 9999999999999999888776654 5689999999999999997 899999999999996
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.97 E-value=1.2e-29 Score=234.45 Aligned_cols=258 Identities=20% Similarity=0.185 Sum_probs=164.4
Q ss_pred CCCCceeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 012188 167 SDCDCKFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSV 246 (468)
Q Consensus 167 ~d~~~~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l 246 (468)
.||..++|..++. +|||||+||++++...|..+++.|. ++||+|+++|+||||.|+.+.. .++++++++++ ..+
T Consensus 6 ~dG~~l~y~~~G~-g~~vv~lHG~~~~~~~~~~~~~~l~---~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~-~~~ 79 (271)
T d1va4a_ 6 KDGTQIYFKDWGS-GKPVLFSHGWLLDADMWEYQMEYLS---SRGYRTIAFDRRGFGRSDQPWT-GNDYDTFADDI-AQL 79 (271)
T ss_dssp TTSCEEEEEEESS-SSEEEEECCTTCCGGGGHHHHHHHH---TTTCEEEEECCTTSTTSCCCSS-CCSHHHHHHHH-HHH
T ss_pred ECCeEEEEEEEcC-CCeEEEECCCCCCHHHHHHHHHHHH---hCCCEEEEEecccccccccccc-ccccccccccc-eee
Confidence 4777898888764 6889999999988876667888876 4799999999999999987654 57999999999 699
Q ss_pred hcccCCceEEEEEEcccHHHH-HHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHH
Q 012188 247 IEPNKVKSFHIVAHSLGCILA-LALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYE 325 (468)
Q Consensus 247 ~~~l~~~~i~lvGhS~Gg~ia-l~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (468)
++.++.++++++|||+||.++ ..+|.++|+++.+++++++........... ........+.........
T Consensus 80 ~~~~~~~~~~~vg~s~gG~~~~~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~ 149 (271)
T d1va4a_ 80 IEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDY----------PQGVPLDVFARFKTELLK 149 (271)
T ss_dssp HHHHTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTB----------TTSBCHHHHHHHHHHHHH
T ss_pred eeecCCCcceeeccccccccccccccccccceeeEEEeecccccccccchhh----------hhhhhhhHHHHHHHHhhh
Confidence 999999999999999988655 556778999999999998765432111000 000000000000000000
Q ss_pred HHh----hHHHHHh--hccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCc
Q 012188 326 HIS----RTICLLI--CKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCD 399 (468)
Q Consensus 326 ~~~----~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 399 (468)
... ....... .......+...... ..... ............. .........+.++++|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-----~~~~~~~~~~~~~-------~~~~~~~~~l~~i~~P 213 (271)
T d1va4a_ 150 DRAQFISDFNAPFYGINKGQVVSQGVQTQT----LQIAL-----LASLKATVDCVTA-------FAETDFRPDMAKIDVP 213 (271)
T ss_dssp HHHHHHHHHHHHHHTGGGTCCCCHHHHHHH----HHHHH-----HSCHHHHHHHHHH-------HHHCCCHHHHHHCCSC
T ss_pred hhhhhhhhhcchhhcccchhhhhhhHHHHH----Hhhhh-----hhhhhhhhhcccc-------cchhhhhhhhhhcccc
Confidence 000 0000000 00000000000000 00000 0000000000000 0011122335788999
Q ss_pred EEEEeeCCCCccChhhHHHH-HHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 400 VNVFHGEDDELIPVECSYNV-QRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 400 vLii~G~~D~~vp~~~~~~l-~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
+++++|++|.++|.+...++ .+.+|++++++++++||+++. ++|+++++.|.+||++
T Consensus 214 vl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fL~k 271 (271)
T d1va4a_ 214 TLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAV-THAQQLNEDLLAFLKR 271 (271)
T ss_dssp EEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTHHH-HTHHHHHHHHHHHHTC
T ss_pred eeecccCCCCCCCHHHHHHHHHHhCCCCEEEEECCCCCchHH-hCHHHHHHHHHHHHCc
Confidence 99999999999998887666 456799999999999999997 8999999999999974
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=99.97 E-value=9.5e-31 Score=238.95 Aligned_cols=250 Identities=15% Similarity=0.067 Sum_probs=158.3
Q ss_pred CCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccC-CceEEEEE
Q 012188 181 SRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNK-VKSFHIVA 259 (468)
Q Consensus 181 ~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~-~~~i~lvG 259 (468)
+++|||+||++++...|..+++.|+ ++||+|+++|+||||.|+.+....+++.+++.++. .+++... .++++++|
T Consensus 2 G~~vvllHG~~~~~~~w~~~~~~L~---~~g~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~lvg 77 (258)
T d1xkla_ 2 GKHFVLVHGACHGGWSWYKLKPLLE---AAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLM-ELMESLSADEKVILVG 77 (258)
T ss_dssp CCEEEEECCTTCCGGGGTTHHHHHH---HTTCEEEECCCTTSTTCCCCGGGCCSHHHHHHHHH-HHHHTSCSSSCEEEEE
T ss_pred CCcEEEECCCCCCHHHHHHHHHHHH---hCCCEEEEecCCCCCCCCCCCCCCcchHHHHHHHh-hhhhcccccccccccc
Confidence 6799999999887776667889887 47899999999999999987777789999999994 6665554 46899999
Q ss_pred EcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhh-hhhhHHHHHHHhhHHHHHhhcc
Q 012188 260 HSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAF-GASMACWYEHISRTICLLICKN 338 (468)
Q Consensus 260 hS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 338 (468)
|||||.+++.++.++|++++++|++++.............................. ...... . .....
T Consensus 78 hS~Gg~va~~~a~~~p~~~~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~----~~~~~ 147 (258)
T d1xkla_ 78 HSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSPE------E----PLTSM 147 (258)
T ss_dssp ETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEEECSCTT------S----CCEEE
T ss_pred cchhHHHHHHHhhhhccccceEEEecccCCCcccchHHHHHHHhhhhhhhhhhhhhhhhhhhhh------h----hcccc
Confidence 999999999999999999999999997654433222111111111111100000000 000000 0 00000
Q ss_pred chhHHHHHHHHhhhH---HHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChhh
Q 012188 339 HRVWEFLAKLVTRNR---IRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVEC 415 (468)
Q Consensus 339 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~ 415 (468)
....+.......... .......... ........+ . ..........+++|+++|+|++|.++|++.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---~-------~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~ 215 (258)
T d1xkla_ 148 FFGPKFLAHKLYQLCSPEDLALASSLVR--PSSLFMEDL---S-------KAKYFTDERFGSVKRVYIVCTEDKGIPEEF 215 (258)
T ss_dssp ECCHHHHHHHTSTTSCHHHHHHHHHHCC--CBCCCHHHH---H-------HCCCCCTTTGGGSCEEEEEETTCTTTTHHH
T ss_pred cccHHHHHHHhhhcccHHHHHHhhhhhh--hhhhhhhhh---h-------hhhhcccccccccceeEeeecCCCCCCHHH
Confidence 000000000000000 0000000000 000000000 0 000111234668999999999999999999
Q ss_pred HHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 416 SYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 416 ~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
++.+.+.+|++++++++++||++++ |+|+++++.|.+|+++
T Consensus 216 ~~~~~~~~~~~~~~~i~~~gH~~~~-e~P~~~~~~l~e~~~k 256 (258)
T d1xkla_ 216 QRWQIDNIGVTEAIEIKGADHMAML-CEPQKLCASLLEIAHK 256 (258)
T ss_dssp HHHHHHHHCCSEEEEETTCCSCHHH-HSHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCEEEEECCCCCchHH-hCHHHHHHHHHHHHHh
Confidence 9999999999999999999999998 9999999999999976
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=6.3e-31 Score=235.53 Aligned_cols=188 Identities=15% Similarity=0.194 Sum_probs=150.4
Q ss_pred CCCCceeEEEecC----CCCeEEEEecCCCCccchhh--hhhhccccCCCcceEEEECCCCCCCCCCCCC-CCCCHHHHH
Q 012188 167 SDCDCKFCTCWSS----SSRDTLFVKTQGPSAFWTET--LFPNFSSASKSTYRLFAIDLLGFGRSPKPTD-SLYTVREHL 239 (468)
Q Consensus 167 ~d~~~~~~~~~~~----~~p~vl~lHG~g~s~~~~~~--~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~-~~~t~~~~~ 239 (468)
.+|..++|+.+.+ .+|+|||+||++++...|.. .++.|+ ++||+|+++|+||||+|+.+.. ..++..+..
T Consensus 13 v~G~~i~y~~~~~~~~~~~~~vvllHG~~~~~~~w~~~~~~~~la---~~gy~via~D~~G~G~S~~~~~~~~~~~~~~~ 89 (208)
T d1imja_ 13 VQGQALFFREALPGSGQARFSVLLLHGIRFSSETWQNLGTLHRLA---QAGYRAVAIDLPGLGHSKEAAAPAPIGELAPG 89 (208)
T ss_dssp ETTEEECEEEEECSSSCCSCEEEECCCTTCCHHHHHHHTHHHHHH---HTTCEEEEECCTTSGGGTTSCCSSCTTSCCCT
T ss_pred ECCEEEEEEEecCCCCCCCCeEEEECCCCCChhHHhhhHHHHHHH---HcCCeEEEeecccccCCCCCCcccccchhhhh
Confidence 3667788888743 45799999999887664433 245555 5899999999999999986653 345556666
Q ss_pred HHHHHHHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhh
Q 012188 240 DMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGAS 319 (468)
Q Consensus 240 ~di~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (468)
+++ ..+++.++.++++|+||||||.+++.+|.++|++++++|+++|.....
T Consensus 90 ~~l-~~~~~~l~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lV~~~p~~~~~---------------------------- 140 (208)
T d1imja_ 90 SFL-AAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDK---------------------------- 140 (208)
T ss_dssp HHH-HHHHHHHTCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGG----------------------------
T ss_pred hhh-hhcccccccccccccccCcHHHHHHHHHHHhhhhcceeeecCcccccc----------------------------
Confidence 777 688899999999999999999999999999999999999998753210
Q ss_pred hHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCc
Q 012188 320 MACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCD 399 (468)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 399 (468)
.....+.++++|
T Consensus 141 --------------------------------------------------------------------~~~~~~~~i~~P 152 (208)
T d1imja_ 141 --------------------------------------------------------------------INAANYASVKTP 152 (208)
T ss_dssp --------------------------------------------------------------------SCHHHHHTCCSC
T ss_pred --------------------------------------------------------------------cccccccccccc
Confidence 000112467899
Q ss_pred EEEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 400 VNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 400 vLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
+|+|+|++|.++|.+ .+..+.+|++++.+++|+||..++ ++|++|.+.+.+||++
T Consensus 153 ~Lii~G~~D~~~~~~--~~~~~~~~~~~~~~i~~~gH~~~~-~~p~~~~~~l~~Fl~~ 207 (208)
T d1imja_ 153 ALIVYGDQDPMGQTS--FEHLKQLPNHRVLIMKGAGHPCYL-DKPEEWHTGLLDFLQG 207 (208)
T ss_dssp EEEEEETTCHHHHHH--HHHHTTSSSEEEEEETTCCTTHHH-HCHHHHHHHHHHHHHT
T ss_pred cccccCCcCcCCcHH--HHHHHhCCCCeEEEECCCCCchhh-hCHHHHHHHHHHHHhc
Confidence 999999999998765 355677899999999999999987 9999999999999975
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Probab=99.96 E-value=1.2e-28 Score=231.75 Aligned_cols=118 Identities=19% Similarity=0.198 Sum_probs=104.7
Q ss_pred CCCCceeEEEecC-CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCC-CCCCHHHHHHHHHH
Q 012188 167 SDCDCKFCTCWSS-SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD-SLYTVREHLDMIEK 244 (468)
Q Consensus 167 ~d~~~~~~~~~~~-~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~-~~~t~~~~~~di~~ 244 (468)
.||..++|..+++ ++|||||+||++++...|..+.+.|+ ++|+|+++|+||||.|+.+.. ..++..++++++ .
T Consensus 19 ~dG~~i~y~~~G~~~g~pvvllHG~~~~~~~w~~~~~~l~----~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~d~-~ 93 (313)
T d1wm1a_ 19 GDGHRIYWELSGNPNGKPAVFIHGGPGGGISPHHRQLFDP----ERYKVLLFDQRGCGRSRPHASLDNNTTWHLVADI-E 93 (313)
T ss_dssp SSSCEEEEEEEECTTSEEEEEECCTTTCCCCGGGGGGSCT----TTEEEEEECCTTSTTCBSTTCCTTCSHHHHHHHH-H
T ss_pred CCCcEEEEEEecCCCCCeEEEECCCCCcccchHHHHHHhh----cCCEEEEEeCCCcccccccccccccchhhHHHHH-H
Confidence 4788999999965 57899999999988777766777776 899999999999999976554 568899999999 6
Q ss_pred HHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCC
Q 012188 245 SVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYY 289 (468)
Q Consensus 245 ~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~ 289 (468)
.++++++.++++++|||+||.+++.+|..+|++|.+++++++...
T Consensus 94 ~~~~~~~~~~~~~vg~s~g~~~~~~~a~~~~~~v~~~v~~~~~~~ 138 (313)
T d1wm1a_ 94 RLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTL 138 (313)
T ss_dssp HHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCC
T ss_pred hhhhccCCCcceeEeeecCCchhhHHHHHHhhhheeeeecccccc
Confidence 999999999999999999999999999999999999999997654
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Probab=99.96 E-value=2e-30 Score=237.20 Aligned_cols=246 Identities=13% Similarity=0.047 Sum_probs=156.0
Q ss_pred EEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhccc-CCceEEEEEEcc
Q 012188 184 TLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPN-KVKSFHIVAHSL 262 (468)
Q Consensus 184 vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l-~~~~i~lvGhS~ 262 (468)
.|||||++++...|..+.+.|+ ++||+|+++|+||||.|+.+....++++++++++ ..++.+. ..++++++||||
T Consensus 5 ~vliHG~~~~~~~w~~~~~~L~---~~g~~Via~Dl~G~G~S~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~lvGhS~ 80 (256)
T d3c70a1 5 FVLIHTICHGAWIWHKLKPLLE---ALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPL-LTFLEALPPGEKVILVGESC 80 (256)
T ss_dssp EEEECCTTCCGGGGTTHHHHHH---HTTCEEEEECCTTSTTCSCCGGGCCSHHHHTHHH-HHHHHHSCTTCCEEEEEETT
T ss_pred EEEeCCCCCCHHHHHHHHHHHH---hCCCEEEEEcCCCCCCCCCCCCCCCCHHHHHHHh-hhhhhhhccccceeecccch
Confidence 5899999887776667889887 4789999999999999988776678999999999 5776664 468999999999
Q ss_pred cHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHH-HHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHHhhccchh
Q 012188 263 GCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYV-MRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKNHRV 341 (468)
Q Consensus 263 Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (468)
||.+++.++.++|++++++|+++++.............. ...................... ......
T Consensus 81 Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~ 148 (256)
T d3c70a1 81 GGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGKEI------------TGLKLG 148 (256)
T ss_dssp HHHHHHHHHHHHGGGEEEEEEESCCCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEETTEEE------------EEEECC
T ss_pred HHHHHHHHhhcCchhhhhhheeccccCCcccchhhHhhhhhhhhhhhhhhHHHhhhcccccc------------chhhhh
Confidence 999999999999999999999997654432222111111 1111111111100000000000 000000
Q ss_pred HHHHHHHHhhhH--HHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChhhHHHH
Q 012188 342 WEFLAKLVTRNR--IRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNV 419 (468)
Q Consensus 342 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l 419 (468)
............ ........... ... ........ .........+++|+++|+|++|.++|++.++.+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~------~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~ 217 (256)
T d3c70a1 149 FTLLRENLYTLCGPEEYELAKMLTR-KGS----LFQNILAK------RPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQ 217 (256)
T ss_dssp HHHHHHHTSTTSCHHHHHHHHHHCC-CBC----CCHHHHTT------SCCCCTTTGGGSCEEEEECTTCSSSCHHHHHHH
T ss_pred hhhhhhhhhhhcchhhHHHhhhhhh-hhh----HHHhhhhh------cchhhhhhccccceeEEeecCCCCCCHHHHHHH
Confidence 000000000000 00000000000 000 00000000 000011234579999999999999999999999
Q ss_pred HHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 420 QRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 420 ~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
.+.+|++++++++|+||++++ ++|+++++.|.+|+++
T Consensus 218 ~~~~p~~~~~~i~~agH~~~~-e~P~~~~~~l~~~~~~ 254 (256)
T d3c70a1 218 IENYKPDKVYKVEGGDHKLQL-TKTKEIAEILQEVADT 254 (256)
T ss_dssp HHHSCCSEEEECCSCCSCHHH-HSHHHHHHHHHHHHHH
T ss_pred HHHCCCCEEEEECCCCCchHH-hCHHHHHHHHHHHHHh
Confidence 999999999999999999998 9999999999999875
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Probab=99.96 E-value=5.1e-29 Score=232.90 Aligned_cols=275 Identities=13% Similarity=0.101 Sum_probs=164.1
Q ss_pred CCCCCCcC--CCCceeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCC---CCCC
Q 012188 160 SHPIPRWS--DCDCKFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD---SLYT 234 (468)
Q Consensus 160 ~~~~~r~~--d~~~~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~---~~~t 234 (468)
|.+..++. +|..++|..++ ++|+|||+||++++...|..+++.|+ ++|+|+++|+||||.|+.+.. ..+.
T Consensus 6 p~~~~~fi~~~g~~i~y~~~G-~g~~vvllHG~~~~~~~~~~~~~~L~----~~~~vi~~Dl~G~G~S~~~~~~~~~~~~ 80 (298)
T d1mj5a_ 6 PFGEKKFIEIKGRRMAYIDEG-TGDPILFQHGNPTSSYLWRNIMPHCA----GLGRLIACDLIGMGDSDKLDPSGPERYA 80 (298)
T ss_dssp CSSCCEEEEETTEEEEEEEES-CSSEEEEECCTTCCGGGGTTTGGGGT----TSSEEEEECCTTSTTSCCCSSCSTTSSC
T ss_pred CCCCCEEEEECCEEEEEEEEc-CCCcEEEECCCCCCHHHHHHHHHHHh----cCCEEEEEeCCCCCCCCCCccccccccc
Confidence 34455563 67778888876 56899999999998887777888887 889999999999999986553 2345
Q ss_pred HHHHHHHHHHHHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchh--hHHHHHhhcCCCCCc
Q 012188 235 VREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQA--SQYVMRKVAPRRVWP 312 (468)
Q Consensus 235 ~~~~~~di~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~ 312 (468)
..+..+++...+.+..+.++++++||||||.+++.++.++|++|.+++++++........... ............
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 157 (298)
T d1mj5a_ 81 YAEHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQA--- 157 (298)
T ss_dssp HHHHHHHHHHHHHHTTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHHSTT---
T ss_pred cchhhhhhccccccccccccCeEEEecccchhHHHHHHHHHhhhheeeccccccccccchhhhhhhhhhhhhhhhhh---
Confidence 566666664455566777899999999999999999999999999999998765442221110 000000000000
Q ss_pred hhhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccch-hHHhhHhHHHhccc-----cccc
Q 012188 313 LIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHN-AAWHTLHNIICGTA-----NKLD 386 (468)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~ 386 (468)
............. ..... .............. .......... .............. ....
T Consensus 158 ~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (298)
T d1mj5a_ 158 GEELVLQDNVFVE---QVLPG-LILRPLSEAEMAAY----------REPFLAAGEARRPTLSWPRQIPIAGTPADVVAIA 223 (298)
T ss_dssp HHHHHTTTCHHHH---THHHH-TSSSCCCHHHHHHH----------HGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHH
T ss_pred hhhhhhhhhhhhh---hhccc-cccccchhhhhhhh----------hhhhccchhhhhhhhhhhhhhhhcchhhhhhhhh
Confidence 0000000000000 00000 00000000000000 0000000000 00000000000000 0001
Q ss_pred chHHHhhccCCCcEEEEeeCCCCccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhcC
Q 012188 387 GYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSSS 459 (468)
Q Consensus 387 ~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~ 459 (468)
......+..+++|+++++|++|.+.+ ...+.+.+.+|++++++++ +||+++. |+|+++++.|.+||++..
T Consensus 224 ~~~~~~~~~~~~P~l~i~g~~d~~~~-~~~~~~~~~~p~~~~~~~~-~GH~~~~-e~P~~v~~~i~~fl~~~~ 293 (298)
T d1mj5a_ 224 RDYAGWLSESPIPKLFINAEPGALTT-GRMRDFCRTWPNQTEITVA-GAHFIQE-DSPDEIGAAIAAFVRRLR 293 (298)
T ss_dssp HHHHHHHTTCCSCEEEEEEEECSSSS-HHHHHHHTTCSSEEEEEEE-ESSCGGG-TCHHHHHHHHHHHHHHHS
T ss_pred hhhhhhhhhcceeEEEEecCCCCcCh-HHHHHHHHHCCCCEEEEeC-CCCchHH-hCHHHHHHHHHHHHhhhc
Confidence 12233457889999999999998765 5667888899999887765 6999997 999999999999999863
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Probab=99.95 E-value=6.6e-28 Score=220.59 Aligned_cols=256 Identities=11% Similarity=0.051 Sum_probs=145.0
Q ss_pred ceeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhccc
Q 012188 171 CKFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPN 250 (468)
Q Consensus 171 ~~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l 250 (468)
.++|...++++|+|||+||++++...|..+++.|+ +.||+|+++|+||||.|+......+.......+. ..+....
T Consensus 6 ~lh~~~~~~~~P~ivllHG~~~~~~~~~~~~~~L~---~~g~~vi~~Dl~G~G~s~~~~~~~~~~~~~~~~~-~~~~~~~ 81 (264)
T d1r3da_ 6 QLHFAKPTARTPLVVLVHGLLGSGADWQPVLSHLA---RTQCAALTLDLPGHGTNPERHCDNFAEAVEMIEQ-TVQAHVT 81 (264)
T ss_dssp EEESSCCBTTBCEEEEECCTTCCGGGGHHHHHHHT---TSSCEEEEECCTTCSSCC-------CHHHHHHHH-HHHTTCC
T ss_pred eEEEcCCCCCCCeEEEeCCCCCCHHHHHHHHHHHH---hCCCEEEEEecccccccccccccccchhhhhhhh-ccccccc
Confidence 35555557778999999999988777777888886 4699999999999999987665444444444444 3555566
Q ss_pred CCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHH-HHHhh
Q 012188 251 KVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWY-EHISR 329 (468)
Q Consensus 251 ~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 329 (468)
+.++++++||||||.+++.++.++|+.+.+++++.+.................... ....... .....
T Consensus 82 ~~~~~~lvGhS~Gg~ia~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~ 150 (264)
T d1r3da_ 82 SEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHD-----------QQWAQRFSQQPIE 150 (264)
T ss_dssp TTSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHH-----------HHHHHHHHHSCHH
T ss_pred ccCceeeeeecchHHHHHHHHHhCchhccccccccccCCCccccchhhhhhhhhhh-----------hhhhhhhhhhhhh
Confidence 77899999999999999999999999999998877543332221111000000000 0000000 00000
Q ss_pred HHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCC
Q 012188 330 TICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDE 409 (468)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~ 409 (468)
.......... .. ........ ............ . ....................+..+++|+++++|++|.
T Consensus 151 ~~~~~~~~~~-~~----~~~~~~~~-~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~l~~~~~p~l~i~G~~D~ 220 (264)
T d1r3da_ 151 HVLSDWYQQA-VF----SSLNHEQR-QTLIAQRSANLG-S---SVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDS 220 (264)
T ss_dssp HHHHHHTTSG-GG----TTCCHHHH-HHHHHHHTTSCH-H---HHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCH
T ss_pred hhhhhhhhhh-hh----cccchHHH-HHHHHHHhhhhh-h---hhHHhhhhccccccccchhhhhccCcceEEEEeCCcH
Confidence 0000000000 00 00000000 000000000000 0 0001111111111122233457889999999999996
Q ss_pred ccChhhHHHHHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 410 LIPVECSYNVQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 410 ~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
.++ .+.+ .+++++++++++||++++ |+|++|++.|.+||++.
T Consensus 221 ~~~-----~~~~-~~~~~~~~i~~~gH~~~~-e~P~~~~~~i~~fl~~l 262 (264)
T d1r3da_ 221 KFQ-----QLAE-SSGLSYSQVAQAGHNVHH-EQPQAFAKIVQAMIHSI 262 (264)
T ss_dssp HHH-----HHHH-HHCSEEEEETTCCSCHHH-HCHHHHHHHHHHHHHHH
T ss_pred HHH-----HHHh-cCCCeEEEECCCCCchHH-HCHHHHHHHHHHHHHhc
Confidence 542 2333 378999999999999998 99999999999999864
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.94 E-value=2.8e-26 Score=206.81 Aligned_cols=230 Identities=13% Similarity=0.151 Sum_probs=145.1
Q ss_pred ecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHH--HHHhcccCCce
Q 012188 177 WSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIE--KSVIEPNKVKS 254 (468)
Q Consensus 177 ~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~--~~l~~~l~~~~ 254 (468)
+.+++++|||+||++++...+..+.+.|+ ++||+|+++|+||||.|..+.. .....+..+++. ...++..+.++
T Consensus 7 ~~~~~~~vvliHG~~~~~~~~~~l~~~L~---~~G~~v~~~D~~G~G~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (242)
T d1tqha_ 7 FEAGERAVLLLHGFTGNSADVRMLGRFLE---SKGYTCHAPIYKGHGVPPEELV-HTGPDDWWQDVMNGYEFLKNKGYEK 82 (242)
T ss_dssp ECCSSCEEEEECCTTCCTHHHHHHHHHHH---HTTCEEEECCCTTSSSCHHHHT-TCCHHHHHHHHHHHHHHHHHHTCCC
T ss_pred cCCCCCeEEEECCCCCCHHHHHHHHHHHH---HCCCEEEEEeCCCCcccccccc-ccchhHHHHHHHHHHhhhhhcccCc
Confidence 34566789999999988877777888886 5799999999999999965443 234444444432 23345667789
Q ss_pred EEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHH
Q 012188 255 FHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLL 334 (468)
Q Consensus 255 i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (468)
++++||||||.+++.++.++|.. ..++++++........ ....... +...... .
T Consensus 83 ~~l~G~S~Gg~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~-------------------~~~~~~~----~ 136 (242)
T d1tqha_ 83 IAVAGLSLGGVFSLKLGYTVPIE--GIVTMCAPMYIKSEET-MYEGVLE-------------------YAREYKK----R 136 (242)
T ss_dssp EEEEEETHHHHHHHHHHTTSCCS--CEEEESCCSSCCCHHH-HHHHHHH-------------------HHHHHHH----H
T ss_pred eEEEEcchHHHHhhhhcccCccc--ccccccccccccchhH-HHHHHHH-------------------HHHHHhh----h
Confidence 99999999999999999999864 4556665543311110 0000000 0000000 0
Q ss_pred hhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChh
Q 012188 335 ICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVE 414 (468)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~ 414 (468)
... ........ ... ...... ....... .........+..+++|+|+++|++|.++|++
T Consensus 137 ~~~---~~~~~~~~-----~~~--~~~~~~-~~~~~~~-----------~~~~~~~~~~~~~~~p~lii~g~~D~~~~~~ 194 (242)
T d1tqha_ 137 EGK---SEEQIEQE-----MEK--FKQTPM-KTLKALQ-----------ELIADVRDHLDLIYAPTFVVQARHDEMINPD 194 (242)
T ss_dssp HTC---CHHHHHHH-----HHH--HTTSCC-TTHHHHH-----------HHHHHHHHTGGGCCSCEEEEEETTCSSSCTT
T ss_pred ccc---hhhhHHHH-----Hhh--hhhhcc-chhhccc-----------ccccccccccceeccccceeecccCCccCHH
Confidence 000 00000000 000 000000 0000000 0001122334678999999999999999999
Q ss_pred hHHHHHHhC--CCCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 415 CSYNVQRKI--PRARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 415 ~~~~l~~~~--p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
.++.+.+.+ +++++++++++||+++.+++++++++.|.+||++.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~Fl~~l 240 (242)
T d1tqha_ 195 SANIIYNEIESPVKQIKWYEQSGHVITLDQEKDQLHEDIYAFLESL 240 (242)
T ss_dssp HHHHHHHHCCCSSEEEEEETTCCSSGGGSTTHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHcCCCCcEEEEECCCCCcCccccCHHHHHHHHHHHHHhC
Confidence 999999987 56799999999999998557999999999999874
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.93 E-value=4.6e-26 Score=221.12 Aligned_cols=277 Identities=11% Similarity=0.082 Sum_probs=152.9
Q ss_pred CcCCCCceeEEEe---------cCCCCeEEEEecCCCCccchhh------hhhhccccCCCcceEEEECCCCCCCCCCCC
Q 012188 165 RWSDCDCKFCTCW---------SSSSRDTLFVKTQGPSAFWTET------LFPNFSSASKSTYRLFAIDLLGFGRSPKPT 229 (468)
Q Consensus 165 r~~d~~~~~~~~~---------~~~~p~vl~lHG~g~s~~~~~~------~~~~L~~~~~~gy~Via~D~~G~G~S~~~~ 229 (468)
...||..+.++.. .+++|+|||+||+++++..|.. +...|. ++||+|+++|+||||.|+.+.
T Consensus 33 ~t~DG~~l~~~ri~~~~~~~~~~~~~~~vlllHG~~~~~~~~~~~~~~~sla~~L~---~~Gy~V~~~D~rG~G~S~~~~ 109 (377)
T d1k8qa_ 33 VTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILA---DAGYDVWLGNSRGNTWARRNL 109 (377)
T ss_dssp ECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHH---HTTCEEEECCCTTSTTSCEES
T ss_pred EcCCCCEEEEEEecCCCCCCccCCCCCeEEEECCCccchhHHhhcCccchHHHHHH---HCCCEEEEEcCCCCCCCCCCC
Confidence 3557766666543 2346899999999876653322 233333 589999999999999997543
Q ss_pred C--------CCCCHH-----HHHHHHHHHHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCC---CC
Q 012188 230 D--------SLYTVR-----EHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPV---PK 293 (468)
Q Consensus 230 ~--------~~~t~~-----~~~~di~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~---~~ 293 (468)
. ..++++ ++.+++ ..+++.++.++++++||||||.+++.+|.++|+.+++++++....... ..
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~Dl~~~i-~~i~~~~g~~~v~lvGhS~GG~ia~~~a~~~p~~~~~l~~~~~~~~~~~~~~~ 188 (377)
T d1k8qa_ 110 YYSPDSVEFWAFSFDEMAKYDLPATI-DFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVATVKYT 188 (377)
T ss_dssp SSCTTSTTTTCCCHHHHHHTHHHHHH-HHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEESCCSCCSSC
T ss_pred CCCCcchhhccCCHHHHhhhhHHHHH-HHHHHHcCCCCEEEEEecchHHHHHHHHHhhhhhhhhceeEeeccccccccch
Confidence 2 123343 445566 678888999999999999999999999999999988888765322211 11
Q ss_pred Cchh------hHHHHHhhc-CCCCCchhhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHh-----------hhHHH
Q 012188 294 GAQA------SQYVMRKVA-PRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVT-----------RNRIR 355 (468)
Q Consensus 294 ~~~~------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~ 355 (468)
.... ......... .....+... .... .................... .....
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (377)
T d1k8qa_ 189 ETLINKLMLVPSFLFKLIFGNKIFYPHHF----FDQF-------LATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLD 257 (377)
T ss_dssp CSGGGGGGTSCHHHHHHHSCSSEESCCCH----HHHH-------HHHHTTTBTTTHHHHHHHHHHHHCCCGGGSCGGGHH
T ss_pred hhHHHHHHhcchhhhhhhhhhhhccchhH----HHHh-------hhhhhcchhhhhHHHHhhhhhhcCCCcccccHHHhh
Confidence 0000 000000000 000000000 0000 00000000000000000000 00000
Q ss_pred HHhhhccccccchhHHhhHhH-HHhccccccc--------------chHHHhhccCCCcEEEEeeCCCCccChhhHHHHH
Q 012188 356 TFLLEGFFCHTHNAAWHTLHN-IICGTANKLD--------------GYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQ 420 (468)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--------------~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~ 420 (468)
.+. ..............+.. ...+.....+ ......+.++++|+|+|+|++|.++|++..+.+.
T Consensus 258 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~vPvL~i~G~~D~~~~~~~~~~l~ 336 (377)
T d1k8qa_ 258 VYL-SHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLL 336 (377)
T ss_dssp HHH-TTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSCHHHHHHHH
T ss_pred hhh-hcccccchHHHHHHHHHHHhcCcchhccchhhhhhhhhhcccCchhhhHhhCCCCEEEEEeCCCCccCHHHHHHHH
Confidence 000 00000000000000000 0000000000 0001124688999999999999999999999999
Q ss_pred HhCCCC-eEEEecCCCccccc--cCcHHHHHHHHHHHHhh
Q 012188 421 RKIPRA-RVKVIEKKDHITIV--VGRQKTFARELEEIWRS 457 (468)
Q Consensus 421 ~~~p~~-~l~~i~~~gH~~~~--~e~p~~~~~~i~~fl~~ 457 (468)
+.+|+. ++++++++||+.++ .+.++++...|.+||++
T Consensus 337 ~~lp~~~~~~~i~~~GH~d~~~~~~a~~~v~~~I~~fl~~ 376 (377)
T d1k8qa_ 337 SKLPNLIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGT 376 (377)
T ss_dssp TTCTTEEEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHT
T ss_pred HHCCCCeEEEEeCCCCCcchhhccchHHHHHHHHHHHHhc
Confidence 999986 78899999997432 36689999999999975
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=99.93 E-value=3.1e-26 Score=225.24 Aligned_cols=119 Identities=10% Similarity=-0.008 Sum_probs=103.1
Q ss_pred CCCceeEEEe---cCCCCeEEEEecCCCCccchhhhhhhccccCCCc------ceEEEECCCCCCCCCCCCC-CCCCHHH
Q 012188 168 DCDCKFCTCW---SSSSRDTLFVKTQGPSAFWTETLFPNFSSASKST------YRLFAIDLLGFGRSPKPTD-SLYTVRE 237 (468)
Q Consensus 168 d~~~~~~~~~---~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~g------y~Via~D~~G~G~S~~~~~-~~~t~~~ 237 (468)
||..++|... +++++||||+||++++...|..+++.|++ .| |+||++|+||||.|++|.. ..|+..+
T Consensus 90 ~G~~iHf~h~~~~~~~~~pLlLlHG~P~s~~~w~~vi~~La~---~g~~~~~~f~VIaPDLpG~G~S~~P~~~~~y~~~~ 166 (394)
T d1qo7a_ 90 EGLTIHFAALFSEREDAVPIALLHGWPGSFVEFYPILQLFRE---EYTPETLPFHLVVPSLPGYTFSSGPPLDKDFGLMD 166 (394)
T ss_dssp TTEEEEEEEECCSCTTCEEEEEECCSSCCGGGGHHHHHHHHH---HCCTTTCCEEEEEECCTTSTTSCCCCSSSCCCHHH
T ss_pred CCEEEEEEEEeccCCCCCEEEEeccccccHHHHHHHHHhhcc---ccCCcccceeeecccccccCCCCCCCCCCccCHHH
Confidence 6666777433 45568999999999999877789999982 34 9999999999999998764 6799999
Q ss_pred HHHHHHHHHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCC
Q 012188 238 HLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 238 ~~~di~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~ 290 (468)
+++++ ..+++.++.++++++|||+||.++..++..+|+.+.+++++..+...
T Consensus 167 ~a~~~-~~l~~~lg~~~~~~vg~~~Gg~v~~~~a~~~p~~~~~~~l~~~~~~~ 218 (394)
T d1qo7a_ 167 NARVV-DQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNLCAMRA 218 (394)
T ss_dssp HHHHH-HHHHHHTTCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCCS
T ss_pred HHHHH-HHHHhhccCcceEEEEecCchhHHHHHHHHhhccccceeEeeecccc
Confidence 99999 79999999999999999999999999999999999999998865544
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=3.3e-25 Score=203.53 Aligned_cols=106 Identities=17% Similarity=0.209 Sum_probs=91.7
Q ss_pred CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceEEEEE
Q 012188 180 SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVA 259 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i~lvG 259 (468)
+++||||+||++++...|..+++.|.+. ..+|+|+++|+||||.|..+. .++++++++++ ..+++.++ ++++|+|
T Consensus 1 ~~~PvvllHG~~~~~~~~~~~~~~l~~~-~~~~~v~~~d~~G~g~S~~~~--~~~~~~~~~~l-~~~l~~l~-~~~~lvG 75 (268)
T d1pjaa_ 1 SYKPVIVVHGLFDSSYSFRHLLEYINET-HPGTVVTVLDLFDGRESLRPL--WEQVQGFREAV-VPIMAKAP-QGVHLIC 75 (268)
T ss_dssp CCCCEEEECCTTCCGGGGHHHHHHHHHH-STTCCEEECCSSCSGGGGSCH--HHHHHHHHHHH-HHHHHHCT-TCEEEEE
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHhh-CCCeEEEEeCCCCCCCCCCcc--ccCHHHHHHHH-HHHHhccC-CeEEEEc
Confidence 3578999999998877666788888721 147999999999999998765 47899999999 69999998 9999999
Q ss_pred EcccHHHHHHHHHhCCC-ccceEEEecCCCCC
Q 012188 260 HSLGCILALALAVKHPG-SVKSLTLLAPPYYP 290 (468)
Q Consensus 260 hS~Gg~ial~~a~~~p~-~v~~lVl~~p~~~~ 290 (468)
|||||.+|+.+|.++|+ +|+++|+++++...
T Consensus 76 hS~GG~ia~~~a~~~p~~~v~~lvl~~~~~~~ 107 (268)
T d1pjaa_ 76 YSQGGLVCRALLSVMDDHNVDSFISLSSPQMG 107 (268)
T ss_dssp ETHHHHHHHHHHHHCTTCCEEEEEEESCCTTC
T ss_pred cccHHHHHHHHHHHCCccccceEEEECCCCcc
Confidence 99999999999999998 69999999986544
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Probab=99.91 E-value=6.3e-24 Score=200.77 Aligned_cols=222 Identities=10% Similarity=0.034 Sum_probs=135.7
Q ss_pred CCCCceeEEEec------CCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCC-CCCCCCCCCCCCHHHHH
Q 012188 167 SDCDCKFCTCWS------SSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGF-GRSPKPTDSLYTVREHL 239 (468)
Q Consensus 167 ~d~~~~~~~~~~------~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~-G~S~~~~~~~~t~~~~~ 239 (468)
.||..+++..+. ..+++||++||++.+..++..+++.|. ++||+|+++|+||| |.|++.. ..+++.++.
T Consensus 12 ~dg~~l~~w~~~p~~~~~~~~~~Vvi~HG~~~~~~~~~~~a~~L~---~~G~~Vi~~D~rGh~G~S~g~~-~~~~~~~~~ 87 (302)
T d1thta_ 12 NNGQELHVWETPPKENVPFKNNTILIASGFARRMDHFAGLAEYLS---TNGFHVFRYDSLHHVGLSSGSI-DEFTMTTGK 87 (302)
T ss_dssp TTTEEEEEEEECCCTTSCCCSCEEEEECTTCGGGGGGHHHHHHHH---TTTCCEEEECCCBCC---------CCCHHHHH
T ss_pred CCCCEEEEEEecCcCCCCCCCCEEEEeCCCcchHHHHHHHHHHHH---HCCCEEEEecCCCCCCCCCCcc-cCCCHHHHH
Confidence 455555554442 234689999999988777777888887 68999999999998 8887654 357888888
Q ss_pred HHHHHHHhc---ccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCC-Cchhh
Q 012188 240 DMIEKSVIE---PNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRV-WPLIA 315 (468)
Q Consensus 240 ~di~~~l~~---~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 315 (468)
+|+ ..+++ ..+.++++|+||||||.+++.+|.. ..++++|+.+|.... .......+..... .+...
T Consensus 88 ~dl-~~vi~~l~~~~~~~i~lvG~SmGG~ial~~A~~--~~v~~li~~~g~~~~-------~~~~~~~~~~~~~~~~~~~ 157 (302)
T d1thta_ 88 NSL-CTVYHWLQTKGTQNIGLIAASLSARVAYEVISD--LELSFLITAVGVVNL-------RDTLEKALGFDYLSLPIDE 157 (302)
T ss_dssp HHH-HHHHHHHHHTTCCCEEEEEETHHHHHHHHHTTT--SCCSEEEEESCCSCH-------HHHHHHHHSSCGGGSCGGG
T ss_pred HHH-HHHHHhhhccCCceeEEEEEchHHHHHHHHhcc--cccceeEeecccccH-------HHHHHHHHhhccchhhhhh
Confidence 877 34444 4567899999999999999998865 358999999876532 1111111111000 00000
Q ss_pred hhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhcc
Q 012188 316 FGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNH 395 (468)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (468)
..... .......... ............. .......+.+
T Consensus 158 ~~~~~-------------~~~~~~~~~~----------------------------~~~~~~~~~~~~~-~~~~~~~~~~ 195 (302)
T d1thta_ 158 LPNDL-------------DFEGHKLGSE----------------------------VFVRDCFEHHWDT-LDSTLDKVAN 195 (302)
T ss_dssp CCSEE-------------EETTEEEEHH----------------------------HHHHHHHHTTCSS-HHHHHHHHTT
T ss_pred ccccc-------------cccccchhhH----------------------------HHHHHHHHhHHHH-HHHHHHHHhh
Confidence 00000 0000000000 0000000011111 1122334578
Q ss_pred CCCcEEEEeeCCCCccChhhHHHHHHhCC--CCeEEEecCCCccccccCcHHH
Q 012188 396 VKCDVNVFHGEDDELIPVECSYNVQRKIP--RARVKVIEKKDHITIVVGRQKT 446 (468)
Q Consensus 396 i~~PvLii~G~~D~~vp~~~~~~l~~~~p--~~~l~~i~~~gH~~~~~e~p~~ 446 (468)
+++|+|+++|++|.+||++.++++++.++ +.++++++|++|.+. +++..
T Consensus 196 i~~PvLii~G~~D~~V~~~~~~~l~~~i~s~~~kl~~~~g~~H~l~--e~~~~ 246 (302)
T d1thta_ 196 TSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDLG--ENLVV 246 (302)
T ss_dssp CCSCEEEEEETTCTTSCHHHHHHHHTTCTTCCEEEEEETTCCSCTT--SSHHH
T ss_pred cCCCEEEEEeCCCCccCHHHHHHHHHhCCCCCceEEEecCCCcccc--cChHH
Confidence 89999999999999999999999999886 579999999999875 66654
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=99.88 E-value=5.3e-21 Score=183.31 Aligned_cols=286 Identities=14% Similarity=0.134 Sum_probs=175.2
Q ss_pred CceeEEEecC----CCCeEEEEecCCCCc---cchhhhhhhccccCCCcceEEEECCCCCCCCCCCCC------------
Q 012188 170 DCKFCTCWSS----SSRDTLFVKTQGPSA---FWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD------------ 230 (468)
Q Consensus 170 ~~~~~~~~~~----~~p~vl~lHG~g~s~---~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~------------ 230 (468)
..+.|..|+. ..++||++|++.+++ .||..++-.=..+-...|.||++|..|.|.++.++.
T Consensus 29 ~~laY~t~G~ln~~~~NaVlv~h~ltg~~~~~~WW~~liG~g~alDt~kyfVI~~n~lG~~~gst~p~s~~p~~~~~~~y 108 (376)
T d2vata1 29 VPVAYKSWGRMNVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAEGQRPY 108 (376)
T ss_dssp EEEEEEEESCCCTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC--CBC
T ss_pred ceEEEEeecccCCCCCCEEEEcCCCcCCccccccHHHhCCCCCccCccceEEEEeccCCCCcCCCCCCCCCcccccCCcc
Confidence 3477888863 356899999987754 476655532112224789999999999876531110
Q ss_pred ----CCCCHHHHHHHHHHHHhcccCCceE-EEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhh
Q 012188 231 ----SLYTVREHLDMIEKSVIEPNKVKSF-HIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKV 305 (468)
Q Consensus 231 ----~~~t~~~~~~di~~~l~~~l~~~~i-~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~ 305 (468)
..+++.|+++.. ..+++++|++++ .++|.||||+.|+++|..||++|+++|.+++.....+.......-....+
T Consensus 109 g~~FP~~ti~D~v~aq-~~ll~~LGI~~l~aViG~SmGGmqal~wa~~~Pd~v~~li~Ia~~~~~s~~~~a~~~~~~~ai 187 (376)
T d2vata1 109 GAKFPRTTIRDDVRIH-RQVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSGWCAAWFETQRQCI 187 (376)
T ss_dssp GGGCCCCCHHHHHHHH-HHHHHHHTCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCHHHHHHHHHHHHHH
T ss_pred cccCCcchhHHHHHHH-HHHHHHhCcceEEEeecccHHHHHHHHHHHhchHHHhhhcccccccccchHHHHHHHHHHHHh
Confidence 246999999998 699999999997 57899999999999999999999999999977654332222122222233
Q ss_pred cCCCCCchhhhhhh-hHHHHHHHhhHHHHHhhccchhHHHHH----------------------------------HHHh
Q 012188 306 APRRVWPLIAFGAS-MACWYEHISRTICLLICKNHRVWEFLA----------------------------------KLVT 350 (468)
Q Consensus 306 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~~ 350 (468)
.....|........ ...-.-...+.+.....+....++... ....
T Consensus 188 ~~Dp~w~~G~Y~~~~~p~~GL~~Ar~~~~~ty~S~~~~~~rf~~~~~~~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (376)
T d2vata1 188 YDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTDSGNSHRAGQPIEA 267 (376)
T ss_dssp HHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC---------------------------CGGG
T ss_pred hccccccCCCccccchhHHHHHHHHHHHHHHhcCHHHHHHHHhhccccccccccccchhhhcccccccccccccccchhH
Confidence 33333321110000 000000000111111111110000000 0001
Q ss_pred hhHHHHHhhhccccccchhHHhhHhHHHhcccc--cccchHHHhhccCCCcEEEEeeCCCCccChhhHHHHHHhCCCCeE
Q 012188 351 RNRIRTFLLEGFFCHTHNAAWHTLHNIICGTAN--KLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRARV 428 (468)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~~~l 428 (468)
-+.+..+..+.+........+..+...+....- .....+.+.+.+|++|+|+|.++.|.+.|++..+++++.+|++++
T Consensus 268 vesyL~~~g~k~~~rfDansyl~l~~a~d~~Di~~~~~g~l~~aL~~I~a~~LvI~~~sD~lFPp~~~~e~a~~l~~a~~ 347 (376)
T d2vata1 268 VSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFDEHVEMGRSIPNSRL 347 (376)
T ss_dssp HHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHHHHHHHHHHSTTEEE
T ss_pred HHHHHHHHHhhhhcccccccHHHHHHHHHhcccccccCCCHHHHHhhCCCCEEEEEeCcccCcCHHHHHHHHHhcCCCeE
Confidence 111112222223333333344443333333221 122356777899999999999999999999999999999999999
Q ss_pred EEec-CCCccccccCcHHHHHHHHHHHHhh
Q 012188 429 KVIE-KKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 429 ~~i~-~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
.+|+ ..||..++ -+++.+.+.|.+||++
T Consensus 348 ~~I~S~~GHDaFL-~e~~~~~~~I~~FL~q 376 (376)
T d2vata1 348 CVVDTNEGHDFFV-MEADKVNDAVRGFLDQ 376 (376)
T ss_dssp EECCCSCGGGHHH-HTHHHHHHHHHHHHTC
T ss_pred EEECCCCCccccc-cCHHHHHHHHHHHHcC
Confidence 9998 67998776 5789999999999974
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Probab=99.87 E-value=3.2e-21 Score=171.76 Aligned_cols=176 Identities=13% Similarity=0.122 Sum_probs=127.8
Q ss_pred CeEEEEecCC---CCcc--chhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceEE
Q 012188 182 RDTLFVKTQG---PSAF--WTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFH 256 (468)
Q Consensus 182 p~vl~lHG~g---~s~~--~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i~ 256 (468)
+++|++|+.+ ++.. +...+...|. +.||.|+.+|+||+|.|.+.........+.+..+...+.++.+.++++
T Consensus 36 ~~~vl~Hph~~~GG~~~~~~~~~la~~l~---~~G~~vlrfd~RG~G~S~g~~~~~~~~~~D~~a~~~~~~~~~~~~~v~ 112 (218)
T d2fuka1 36 VTAIVCHPLSTEGGSMHNKVVTMAARALR---ELGITVVRFNFRSVGTSAGSFDHGDGEQDDLRAVAEWVRAQRPTDTLW 112 (218)
T ss_dssp EEEEEECSCTTTTCSTTCHHHHHHHHHHH---TTTCEEEEECCTTSTTCCSCCCTTTHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred cEEEEECCCCCCCcCCCChHHHHHHHHHH---HcCCeEEEeecCCCccCCCccCcCcchHHHHHHHHHHHhhcccCceEE
Confidence 3568888543 3222 2233445555 689999999999999998765432222222222225666677788999
Q ss_pred EEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHHhh
Q 012188 257 IVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLIC 336 (468)
Q Consensus 257 lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (468)
++||||||.+++.+|.+. .++++|+++|+......
T Consensus 113 l~G~S~Gg~va~~~a~~~--~~~~lil~ap~~~~~~~------------------------------------------- 147 (218)
T d2fuka1 113 LAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRWDF------------------------------------------- 147 (218)
T ss_dssp EEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTBCC-------------------------------------------
T ss_pred EEEEcccchhhhhhhccc--ccceEEEeCCcccchhh-------------------------------------------
Confidence 999999999999998875 48899999976421000
Q ss_pred ccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChhhH
Q 012188 337 KNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECS 416 (468)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~ 416 (468)
. ...+.+|+|+|||++|.++|++.+
T Consensus 148 -------------------------------------------------~------~~~~~~P~Lvi~G~~D~~vp~~~~ 172 (218)
T d2fuka1 148 -------------------------------------------------S------DVQPPAQWLVIQGDADEIVDPQAV 172 (218)
T ss_dssp -------------------------------------------------T------TCCCCSSEEEEEETTCSSSCHHHH
T ss_pred -------------------------------------------------h------ccccccceeeEecCCCcCcCHHHH
Confidence 0 023468999999999999999999
Q ss_pred HHHHHhCC-CCeEEEecCCCccccccCcHHHHHHHHHHHHhhcCCCC
Q 012188 417 YNVQRKIP-RARVKVIEKKDHITIVVGRQKTFARELEEIWRSSSGHE 462 (468)
Q Consensus 417 ~~l~~~~p-~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~~~~ 462 (468)
+++.+.++ ..++++++|++|+.. ++.+++.+.+.+|+++--..+
T Consensus 173 ~~l~~~~~~~~~l~~i~ga~H~f~--~~~~~l~~~~~~~v~~~l~~~ 217 (218)
T d2fuka1 173 YDWLETLEQQPTLVRMPDTSHFFH--RKLIDLRGALQHGVRRWLPAT 217 (218)
T ss_dssp HHHHTTCSSCCEEEEETTCCTTCT--TCHHHHHHHHHHHHGGGCSSC
T ss_pred HHHHHHccCCceEEEeCCCCCCCC--CCHHHHHHHHHHHHHHhcCCC
Confidence 99988875 468999999999754 566789999999998754433
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Probab=99.87 E-value=9.7e-22 Score=171.76 Aligned_cols=178 Identities=14% Similarity=0.153 Sum_probs=125.9
Q ss_pred eEEEEecCCCC--ccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceEEEEEE
Q 012188 183 DTLFVKTQGPS--AFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAH 260 (468)
Q Consensus 183 ~vl~lHG~g~s--~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i~lvGh 260 (468)
.||++||++++ ..|+..+...|. ++||+|+++|+||+|.+ ..+++++.+ ....+..+ ++++++||
T Consensus 3 ~V~~vHG~~~~~~~~~~~~l~~~L~---~~G~~v~~~d~p~~~~~--------~~~~~~~~l-~~~~~~~~-~~~~lvGh 69 (186)
T d1uxoa_ 3 QVYIIHGYRASSTNHWFPWLKKRLL---ADGVQADILNMPNPLQP--------RLEDWLDTL-SLYQHTLH-ENTYLVAH 69 (186)
T ss_dssp EEEEECCTTCCTTSTTHHHHHHHHH---HTTCEEEEECCSCTTSC--------CHHHHHHHH-HTTGGGCC-TTEEEEEE
T ss_pred EEEEECCCCCCcchhHHHHHHHHHH---hCCCEEEEeccCCCCcc--------hHHHHHHHH-HHHHhccC-CCcEEEEe
Confidence 69999999875 346666777776 58999999999999865 477788777 45555544 78999999
Q ss_pred cccHHHHHHHHHhCCCcc--ceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHHhhcc
Q 012188 261 SLGCILALALAVKHPGSV--KSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKN 338 (468)
Q Consensus 261 S~Gg~ial~~a~~~p~~v--~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (468)
||||.+++.++.++|+.. .+++...++......... .
T Consensus 70 S~Gg~~a~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~-----------------------~------------------ 108 (186)
T d1uxoa_ 70 SLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPTLQM-----------------------L------------------ 108 (186)
T ss_dssp TTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTTCGG-----------------------G------------------
T ss_pred chhhHHHHHHHHhCCccceeeEEeecccccccchhhhh-----------------------h------------------
Confidence 999999999999999754 444444443222111000 0
Q ss_pred chhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChhhHHH
Q 012188 339 HRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYN 418 (468)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~ 418 (468)
..+.. .........++..|+++++|++|.++|++.++.
T Consensus 109 ---------------------~~~~~---------------------~~~~~~~~~~~~~p~lvi~g~~D~~vp~~~~~~ 146 (186)
T d1uxoa_ 109 ---------------------DEFTQ---------------------GSFDHQKIIESAKHRAVIASKDDQIVPFSFSKD 146 (186)
T ss_dssp ---------------------GGGTC---------------------SCCCHHHHHHHEEEEEEEEETTCSSSCHHHHHH
T ss_pred ---------------------hhhhc---------------------ccccccccccCCCCEEEEecCCCCCCCHHHHHH
Confidence 00000 000000112346899999999999999999999
Q ss_pred HHHhCCCCeEEEecCCCcccccc--CcHHHHHHHHHHHHhh
Q 012188 419 VQRKIPRARVKVIEKKDHITIVV--GRQKTFARELEEIWRS 457 (468)
Q Consensus 419 l~~~~p~~~l~~i~~~gH~~~~~--e~p~~~~~~i~~fl~~ 457 (468)
+++.+ ++++++++++||+...+ ..-.++.+.|.+||.+
T Consensus 147 l~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~~~l~~~~~~ 186 (186)
T d1uxoa_ 147 LAQQI-DAALYEVQHGGHFLEDEGFTSLPIVYDVLTSYFSK 186 (186)
T ss_dssp HHHHT-TCEEEEETTCTTSCGGGTCSCCHHHHHHHHHHHHC
T ss_pred HHHHc-CCEEEEeCCCCCcCccccCcccHHHHHHHHHHHcC
Confidence 99987 78999999999986631 1235789999999864
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=99.87 E-value=2.9e-21 Score=186.78 Aligned_cols=220 Identities=13% Similarity=0.030 Sum_probs=141.2
Q ss_pred CCCceeEEEec----CCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHH
Q 012188 168 DCDCKFCTCWS----SSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIE 243 (468)
Q Consensus 168 d~~~~~~~~~~----~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~ 243 (468)
+|..+..+.+. ++.|+||++||++++...+..+...|. ++||.|+++|+||||.|........+.+..+..+.
T Consensus 114 dg~~l~g~l~~P~~~~~~P~Vi~~hG~~~~~e~~~~~~~~l~---~~G~~vl~~D~~G~G~s~~~~~~~~~~~~~~~~v~ 190 (360)
T d2jbwa1 114 DGIPMPVYVRIPEGPGPHPAVIMLGGLESTKEESFQMENLVL---DRGMATATFDGPGQGEMFEYKRIAGDYEKYTSAVV 190 (360)
T ss_dssp TTEEEEEEEECCSSSCCEEEEEEECCSSCCTTTTHHHHHHHH---HTTCEEEEECCTTSGGGTTTCCSCSCHHHHHHHHH
T ss_pred CCcccceEEEecCCCCCceEEEEeCCCCccHHHHHHHHHHHH---hcCCEEEEEccccccccCccccccccHHHHHHHHH
Confidence 55556655552 234789999998776554444555555 58999999999999999765544456666666653
Q ss_pred HHHhc---ccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhh
Q 012188 244 KSVIE---PNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASM 320 (468)
Q Consensus 244 ~~l~~---~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (468)
.++. .++.++++++||||||++++.+|..+| +++++|.+++.......... .. .
T Consensus 191 -d~l~~~~~vd~~rI~l~G~S~GG~~Al~~A~~~p-ri~a~V~~~~~~~~~~~~~~---------------~~-----~- 247 (360)
T d2jbwa1 191 -DLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEP-RLAACISWGGFSDLDYWDLE---------------TP-----L- 247 (360)
T ss_dssp -HHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCSCSTTGGGS---------------CH-----H-
T ss_pred -HHHHhcccccccceeehhhhcccHHHHHHhhcCC-CcceEEEEcccccHHHHhhh---------------hh-----h-
Confidence 3333 234468999999999999999999988 69999999876543111000 00 0
Q ss_pred HHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcE
Q 012188 321 ACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDV 400 (468)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pv 400 (468)
...... .. ...... + ........ .......+.++++|+
T Consensus 248 --~~~~~~----~~-~~~~~~-~---------~~~~~~~~-------------------------~~~~~~~~~~i~~P~ 285 (360)
T d2jbwa1 248 --TKESWK----YV-SKVDTL-E---------EARLHVHA-------------------------ALETRDVLSQIACPT 285 (360)
T ss_dssp --HHHHHH----HH-TTCSSH-H---------HHHHHHHH-------------------------HTCCTTTGGGCCSCE
T ss_pred --hhHHHH----Hh-ccCCch-H---------HHHHHHHh-------------------------hcchhhhHhhCCCCE
Confidence 000000 00 000000 0 00000000 000112346889999
Q ss_pred EEEeeCCCCccChhhHHHHHHhCCC--CeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 401 NVFHGEDDELIPVECSYNVQRKIPR--ARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 401 Lii~G~~D~~vp~~~~~~l~~~~p~--~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
|++||++|. +|++.++.+++.+++ .+++++++++|... +++.+....+.+||++.
T Consensus 286 Lii~G~~D~-vp~~~~~~l~~~~~~~~~~l~~~~~g~H~~~--~~~~~~~~~i~dWl~~~ 342 (360)
T d2jbwa1 286 YILHGVHDE-VPLSFVDTVLELVPAEHLNLVVEKDGDHCCH--NLGIRPRLEMADWLYDV 342 (360)
T ss_dssp EEEEETTSS-SCTHHHHHHHHHSCGGGEEEEEETTCCGGGG--GGTTHHHHHHHHHHHHH
T ss_pred EEEEeCCCC-cCHHHHHHHHHhcCCCCeEEEEECCCCcCCC--cChHHHHHHHHHHHHHH
Confidence 999999998 699999999999874 46778899999754 57777778888888763
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=99.86 E-value=1.2e-20 Score=179.81 Aligned_cols=286 Identities=11% Similarity=0.109 Sum_probs=178.1
Q ss_pred CceeEEEecC----CCCeEEEEecCCCCc-------------cchhhhhhhccccCCCcceEEEECCCCCCCCCCCCC--
Q 012188 170 DCKFCTCWSS----SSRDTLFVKTQGPSA-------------FWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD-- 230 (468)
Q Consensus 170 ~~~~~~~~~~----~~p~vl~lHG~g~s~-------------~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~-- 230 (468)
..+.|..|+. ..+.||++|++.++. .||..++-.=..+-.+.|.||++|..|.|.|+.++.
T Consensus 27 ~~l~Y~t~G~ln~~~~NaVlv~h~~tG~~~~~g~~~~~~~~~gww~~liG~g~~lDt~~yfVI~~n~lG~~~~ss~~~s~ 106 (362)
T d2pl5a1 27 VVIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSGPLSI 106 (362)
T ss_dssp EEEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSSTTSB
T ss_pred ceEEEEeeeccCCCCCCEEEECCCCCcchhccccCCccCCCcchHHHhcCCCCccCccccEEEeeccccCcccccCcccc
Confidence 4577888853 347899999987742 466555532111224789999999999888743321
Q ss_pred ------------CCCCHHHHHHHHHHHHhcccCCceEE-EEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchh
Q 012188 231 ------------SLYTVREHLDMIEKSVIEPNKVKSFH-IVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQA 297 (468)
Q Consensus 231 ------------~~~t~~~~~~di~~~l~~~l~~~~i~-lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~ 297 (468)
...++.|++... +.+++++|++++. ++|.||||+.|+.+|..||+.|+++|.+++.....+.....
T Consensus 107 ~p~~~~~yg~~fP~~t~~D~v~~~-~~ll~~LGI~~l~~viG~SmGGmqAl~wA~~yPd~v~~~v~ia~sa~~s~~~~~~ 185 (362)
T d2pl5a1 107 HPETSTPYGSRFPFVSIQDMVKAQ-KLLVESLGIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHSAMQIAF 185 (362)
T ss_dssp CTTTSSBCGGGSCCCCHHHHHHHH-HHHHHHTTCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSBCCHHHHHH
T ss_pred ccccccccCcCCccchhHHHHHHH-HHHHHHhCcCeeEEEeehhHHHHHHHHHHHhCchHhhhhcccccccccCHHHHHH
Confidence 235888988887 7899999999987 67999999999999999999999999999876553332222
Q ss_pred hHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHHhhccchhHHH-HHHHHhh----------hHHHHHhhhcccccc
Q 012188 298 SQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEF-LAKLVTR----------NRIRTFLLEGFFCHT 366 (468)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----------~~~~~~~~~~~~~~~ 366 (468)
.......+.....|.........+..--...+.+..........++. +.+.... ..+..+..+.+....
T Consensus 186 ~~~~~~aI~~Dp~~~~G~Y~~~~P~~GL~~AR~~~~~~y~s~~~~~~~f~~~~~~~~~~~~~~~ve~yl~~~g~k~~~rf 265 (362)
T d2pl5a1 186 NEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQGESFVDRF 265 (362)
T ss_dssp HHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGSTTCCSSSCC
T ss_pred HHHHHHHHhcCCccccCCcccCChhHHHHHHHHHHHHHHcCchhhhhhhccccccccccchhHHHHHHHHHHHHHHHhcC
Confidence 33333444444444332221100000011112222111111111111 1110000 011111112222233
Q ss_pred chhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChhhHHHHHHhCCCC----eEEEec-CCCcccccc
Q 012188 367 HNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIPRA----RVKVIE-KKDHITIVV 441 (468)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p~~----~l~~i~-~~gH~~~~~ 441 (468)
....+..+...+..........+...+++|++|+|+|..+.|.+.|++..+++++.+|++ ++++++ ..||..++
T Consensus 266 Dan~yl~l~~a~~~~Di~~~~~l~~aL~~I~AkvLvi~~~sD~lFpp~~~~~~a~~l~~a~~~v~~~eI~S~~GHdaFL- 344 (362)
T d2pl5a1 266 DANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYVELQSGEGHDSFL- 344 (362)
T ss_dssp CHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTCCEEEEEECCCBSSGGGG-
T ss_pred CHHHHHHHHhhhhcccccccccHHHHHhhCCCCEEEEEeCcccCcCHHHHHHHHHHHHhCCCCeEEEEeCCCCCcchhc-
Confidence 334444444444333333334567778999999999999999999999999999988754 677775 47999987
Q ss_pred CcHHHHHHHHHHHHhh
Q 012188 442 GRQKTFARELEEIWRS 457 (468)
Q Consensus 442 e~p~~~~~~i~~fl~~ 457 (468)
.+.+++.+.|.+||+.
T Consensus 345 ~e~~~~~~~I~~FL~~ 360 (362)
T d2pl5a1 345 LKNPKQIEILKGFLEN 360 (362)
T ss_dssp SCCHHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHHHcC
Confidence 7788899999999975
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.86 E-value=2.2e-21 Score=181.38 Aligned_cols=216 Identities=12% Similarity=0.091 Sum_probs=142.5
Q ss_pred cCCCCeEEEEecC--CCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCC--CCCCHHHHHHHHHHHHhcccCCc
Q 012188 178 SSSSRDTLFVKTQ--GPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD--SLYTVREHLDMIEKSVIEPNKVK 253 (468)
Q Consensus 178 ~~~~p~vl~lHG~--g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~--~~~t~~~~~~di~~~l~~~l~~~ 253 (468)
++++|+++++||+ +++...+..+.+.|. .+++|+++|+||||.|+.... ...+++++++++...+++..+..
T Consensus 57 ~~~~~~l~c~~~~~~~g~~~~y~~la~~L~----~~~~V~al~~pG~~~~~~~~~~~~~~s~~~~a~~~~~~i~~~~~~~ 132 (283)
T d2h7xa1 57 AEGRAVLVGCTGTAANGGPHEFLRLSTSFQ----EERDFLAVPLPGYGTGTGTGTALLPADLDTALDAQARAILRAAGDA 132 (283)
T ss_dssp -CCCCEEEEECCCCTTCSTTTTHHHHHTTT----TTCCEEEECCTTCCBC---CBCCEESSHHHHHHHHHHHHHHHHTTS
T ss_pred CCCCceEEEeCCCCCCCCHHHHHHHHHhcC----CCceEEEEeCCCCCCCCCCccccccCCHHHHHHHHHHHHHHhcCCC
Confidence 3456899999984 344455556777777 889999999999999876543 23589999998856788888889
Q ss_pred eEEEEEEcccHHHHHHHHHhC----CCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhh
Q 012188 254 SFHIVAHSLGCILALALAVKH----PGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISR 329 (468)
Q Consensus 254 ~i~lvGhS~Gg~ial~~a~~~----p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (468)
+++|+||||||.+|+.+|.++ ++.+.++|++++......... ... ......
T Consensus 133 P~vL~GhS~GG~vA~e~A~~l~~~~g~~v~~LvL~d~~~~~~~~~~---~~~----------------------~~~~~~ 187 (283)
T d2h7xa1 133 PVVLLGHSGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPI---EVW----------------------SRQLGE 187 (283)
T ss_dssp CEEEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTCCHHH---HHT----------------------HHHHHH
T ss_pred ceEEEEeccchHHHHHHHHhhHHHcCCCceEEEEecCCccccccch---hhh----------------------hhhhHH
Confidence 999999999999999999875 567999999997653311110 000 000000
Q ss_pred HHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCC
Q 012188 330 TICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDE 409 (468)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~ 409 (468)
.... ........ ..+.. .......... .....+++|+++++|++|.
T Consensus 188 ~~~~--~~~~~~~~--------~~l~a--------------~~~~~~~~~~----------~~~~~~~~Pvl~i~g~~d~ 233 (283)
T d2h7xa1 188 GLFA--GELEPMSD--------ARLLA--------------MGRYARFLAG----------PRPGRSSAPVLLVRASEPL 233 (283)
T ss_dssp HHHH--TCSSCCCH--------HHHHH--------------HHHHHHHHHS----------CCCCCCCSCEEEEEESSCS
T ss_pred Hhhc--cccccccc--------HHHHH--------------HHHHHHHHhh----------ccccccCCCeEEEEeCCCC
Confidence 0000 00000000 00000 0000000000 0124678999999999999
Q ss_pred ccChhhHHHHHHhCCC-CeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 410 LIPVECSYNVQRKIPR-ARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 410 ~vp~~~~~~l~~~~p~-~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
.++.+....+.+.+++ .++++++| ||+.+++++++.+++.|.+||+.
T Consensus 234 ~~~~~~~~~w~~~~~~~~~~~~v~G-~H~~ml~e~~~~vA~~i~~~L~~ 281 (283)
T d2h7xa1 234 GDWQEERGDWRAHWDLPHTVADVPG-DHFTMMRDHAPAVAEAVLSWLDA 281 (283)
T ss_dssp SCCCGGGCCCSCCCSSCSEEEEESS-CTTHHHHTTHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhCCCCcEEEEEcC-CCcccccCCHHHHHHHHHHHHHh
Confidence 9998887777777765 58999996 89877657899999999999986
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.85 E-value=7.2e-22 Score=182.48 Aligned_cols=97 Identities=9% Similarity=0.089 Sum_probs=77.8
Q ss_pred ecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceEE
Q 012188 177 WSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFH 256 (468)
Q Consensus 177 ~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i~ 256 (468)
+.++++||||+||++++...|..+.+.| +++|+++|+||+|.|+ ++++++++....+.+..+.++++
T Consensus 21 ~~~~~~Pl~l~Hg~~gs~~~~~~l~~~L------~~~v~~~d~~g~~~~~-------~~~~~a~~~~~~~~~~~~~~~~~ 87 (286)
T d1xkta_ 21 VQSSERPLFLVHPIEGSTTVFHSLASRL------SIPTYGLQCTRAAPLD-------SIHSLAAYYIDCIRQVQPEGPYR 87 (286)
T ss_dssp CCCCSCCEEEECCTTCCCGGGHHHHHTC------SSCEEEECCCTTSCCS-------CHHHHHHHHHHHHHHHCCSSCCE
T ss_pred CCCCCCeEEEECCCCccHHHHHHHHHHc------CCeEEEEeCCCCCCCC-------CHHHHHHHHHHHHHHhcCCCceE
Confidence 3566788999999999888777777766 4889999999999874 67888887756777888889999
Q ss_pred EEEEcccHHHHHHHHHhCCCccceEEEecC
Q 012188 257 IVAHSLGCILALALAVKHPGSVKSLTLLAP 286 (468)
Q Consensus 257 lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p 286 (468)
|+||||||.+|+.+|.++|+++.++++++.
T Consensus 88 lvGhS~Gg~vA~~~A~~~p~~~~~v~~l~~ 117 (286)
T d1xkta_ 88 VAGYSYGACVAFEMCSQLQAQQSPAPTHNS 117 (286)
T ss_dssp EEEETHHHHHHHHHHHHHHHC------CCE
T ss_pred EeecCCccHHHHHHHHHHHHcCCCceeEEE
Confidence 999999999999999999999988877663
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=99.85 E-value=1.4e-19 Score=172.19 Aligned_cols=286 Identities=10% Similarity=0.100 Sum_probs=172.6
Q ss_pred CceeEEEecC----CCCeEEEEecCCCCc---------cchhhhhhhccccCCCcceEEEECCCCCCCCCCCCC------
Q 012188 170 DCKFCTCWSS----SSRDTLFVKTQGPSA---------FWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD------ 230 (468)
Q Consensus 170 ~~~~~~~~~~----~~p~vl~lHG~g~s~---------~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~------ 230 (468)
..+.|..|+. ..++||++|++.++. .||+.++-.=..+-...|.||++|..|.|.++.++.
T Consensus 24 ~~laY~t~G~ln~~~~NaVlv~h~~tg~~~~~~~~~~~gWW~~liG~g~alDt~kyfVI~~n~lG~~~gSs~p~s~~p~t 103 (357)
T d2b61a1 24 INVAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSINPQT 103 (357)
T ss_dssp EEEEEEEESCCCTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBCTTT
T ss_pred ceEEEEeecccCCCCCCEEEEcCCCCccccccccCCCCCcHHHhcCCCCccCCCceEEEEecccCCccccCCcCCCCCCC
Confidence 4577888853 347999999987742 266555432111223689999999999876532111
Q ss_pred --------CCCCHHHHHHHHHHHHhcccCCceE-EEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHH
Q 012188 231 --------SLYTVREHLDMIEKSVIEPNKVKSF-HIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYV 301 (468)
Q Consensus 231 --------~~~t~~~~~~di~~~l~~~l~~~~i-~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~ 301 (468)
...++.|+++.. ..+++++|++++ .++|.||||+.|+.+|.+||+.|+++|.+++.....+.........
T Consensus 104 g~~~g~~FP~iti~D~v~aq-~~Ll~~LGI~~l~~viG~SmGGmqAl~wa~~~Pd~v~~~i~i~~~a~~s~~~~~~~~~~ 182 (357)
T d2b61a1 104 GKPYGSQFPNIVVQDIVKVQ-KALLEHLGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEAIGFNHVM 182 (357)
T ss_dssp SSBCGGGCCCCCHHHHHHHH-HHHHHHTTCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHHHHHHHHH
T ss_pred CCCCCcccccchhHHHHHHH-HHHHHHhCcceEEEEecccHHHHHHHHHHHhhhHHHhhhcccccccccchhHHHHHHHH
Confidence 246999999998 688999999998 5679999999999999999999999999997754433222222223
Q ss_pred HHhhcCCCCCchhh--------hhhhhHHHHHHHh----hHHHHHhhccchhHH-HHHHHHhhhHHHHHhhhccccccch
Q 012188 302 MRKVAPRRVWPLIA--------FGASMACWYEHIS----RTICLLICKNHRVWE-FLAKLVTRNRIRTFLLEGFFCHTHN 368 (468)
Q Consensus 302 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (468)
...+.....|.... .+....+....+. ..+...+.+...... .....+..+.+..+..+.+......
T Consensus 183 ~~aI~~Dp~~~~G~Y~~~~~p~~GL~~Ar~~a~~ty~s~~~~~~~f~r~~~~~~~~~~~~~~vesyL~~~g~kf~~rfDa 262 (357)
T d2b61a1 183 RQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQGKKFLERFDA 262 (357)
T ss_dssp HHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHHHHHHHHTTCCH
T ss_pred HHHHHcCCCCCCCCcccCCCchhHHHHHHHHHHhhccCHHHHHHHhccccccccccccchhhHHHHHHHHHHHHHhhCCH
Confidence 33444444443221 1111111111111 000000000000000 0000001111111222222222233
Q ss_pred hHHhhHhHHHhccc-ccccchHHHhhccCCCcEEEEeeCCCCccChhhHHHHHHhCC----CCeEEEecC-CCccccccC
Q 012188 369 AAWHTLHNIICGTA-NKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIP----RARVKVIEK-KDHITIVVG 442 (468)
Q Consensus 369 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p----~~~l~~i~~-~gH~~~~~e 442 (468)
..+..+...+.... ..-...+.+.+++|++|+|+|..+.|.+.|++..++.++.+| ++++++++. .||..++ -
T Consensus 263 n~yl~l~~a~~~~D~~~~~~~l~~aL~~I~a~vLvi~~~sD~lFpp~~~~~~a~~l~~~~~~v~~~~I~S~~GHdafL-~ 341 (357)
T d2b61a1 263 NSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGVDLHFYEFPSDYGHDAFL-V 341 (357)
T ss_dssp HHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEECCTTGGGHHH-H
T ss_pred HHHHHHHHHhhhcccccccccHHHHHhhcCCCEEEEEeCCccccCHHHHHHHHHHHHhcCCCeEEEEECCCCCccccC-c
Confidence 33333333222211 122346777789999999999999999999999888888775 458888986 4999887 5
Q ss_pred cHHHHHHHHHHHHhh
Q 012188 443 RQKTFARELEEIWRS 457 (468)
Q Consensus 443 ~p~~~~~~i~~fl~~ 457 (468)
+.+++.+.|.+||+.
T Consensus 342 e~~~~~~~I~~fL~~ 356 (357)
T d2b61a1 342 DYDQFEKRIRDGLAG 356 (357)
T ss_dssp CHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHcc
Confidence 688999999999975
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Probab=99.85 E-value=4.4e-21 Score=172.91 Aligned_cols=219 Identities=15% Similarity=0.087 Sum_probs=128.1
Q ss_pred CCCceeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHh
Q 012188 168 DCDCKFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVI 247 (468)
Q Consensus 168 d~~~~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~ 247 (468)
||....+....+++++|||+||++++...|..+.+.|. +|.|+++|++|+|. ..+++++.| .
T Consensus 4 ~g~~~~~~~~~~~~~~l~~lhg~~g~~~~~~~la~~L~-----~~~v~~~~~~g~~~---------~a~~~~~~i----~ 65 (230)
T d1jmkc_ 4 DGLQDVTIMNQDQEQIIFAFPPVLGYGLMYQNLSSRLP-----SYKLCAFDFIEEED---------RLDRYADLI----Q 65 (230)
T ss_dssp CSSTTEEEESTTCSEEEEEECCTTCCGGGGHHHHHHCT-----TEEEEEECCCCSTT---------HHHHHHHHH----H
T ss_pred CCCceEEeecCCCCCeEEEEcCCCCCHHHHHHHHHHCC-----CCEEeccCcCCHHH---------HHHHHHHHH----H
Confidence 33333344446667899999999988887777888875 79999999999863 244555444 3
Q ss_pred cccCCceEEEEEEcccHHHHHHHHHhCCCc---cceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHH
Q 012188 248 EPNKVKSFHIVAHSLGCILALALAVKHPGS---VKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWY 324 (468)
Q Consensus 248 ~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~---v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (468)
+..+.++++|+||||||.+|+.+|.++|++ +..++.+++.......... ... .. ......
T Consensus 66 ~~~~~~~~~lvGhS~GG~vA~~~A~~~~~~~~~v~~l~~~~~~~~~~~~~~~---~~~---------~~----~~~~~~- 128 (230)
T d1jmkc_ 66 KLQPEGPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLD---GRT---------VE----SDVEAL- 128 (230)
T ss_dssp HHCCSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC------------------------CCHHHH-
T ss_pred HhCCCCcEEEEeeccChHHHHHHHHhhhhhCccceeeecccccCccchhhhh---hhh---------hh----hhhhhh-
Confidence 344567899999999999999999987765 4445555443221111000 000 00 000000
Q ss_pred HHHhhHHHHHhhccch-hHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEE
Q 012188 325 EHISRTICLLICKNHR-VWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVF 403 (468)
Q Consensus 325 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii 403 (468)
......... ..+.....+.. ..... .... ........+++|++++
T Consensus 129 -------~~~~~~~~~~~~~~~~~~~~~-~~~~~----------------~~~~----------~~~~~~~~i~~p~l~i 174 (230)
T d1jmkc_ 129 -------MNVNRDNEALNSEAVKHGLKQ-KTHAF----------------YSYY----------VNLISTGQVKADIDLL 174 (230)
T ss_dssp -------HHHTTTCSGGGSHHHHHHHHH-HHHHH----------------HHHH----------HHCCCCSCBSSEEEEE
T ss_pred -------hhccccccccccHHHHHHHHH-HHHHH----------------HHhh----------hcccccccccCcceee
Confidence 000000000 00000000000 00000 0000 0001125678999999
Q ss_pred eeCCCCccChhhHHHHHHhC-CCCeEEEecCCCccccccCcH--HHHHHHHHHHHhhc
Q 012188 404 HGEDDELIPVECSYNVQRKI-PRARVKVIEKKDHITIVVGRQ--KTFARELEEIWRSS 458 (468)
Q Consensus 404 ~G~~D~~vp~~~~~~l~~~~-p~~~l~~i~~~gH~~~~~e~p--~~~~~~i~~fl~~~ 458 (468)
+|++|..++..... +.+.. ++.+++++++ ||+.++ ++| +++++.|.+||++.
T Consensus 175 ~g~~D~~~~~~~~~-w~~~~~~~~~~~~i~g-~H~~ml-~~~~~~~va~~I~~~L~~~ 229 (230)
T d1jmkc_ 175 TSGADFDIPEWLAS-WEEATTGAYRMKRGFG-THAEML-QGETLDRNAGILLEFLNTQ 229 (230)
T ss_dssp ECSSCCCCCTTEEC-SGGGBSSCEEEEECSS-CGGGTT-SHHHHHHHHHHHHHHHTCB
T ss_pred eecCCcccchhHHH-HHHhccCCcEEEEEcC-CChhhc-CCccHHHHHHHHHHHHhhc
Confidence 99999999865543 33444 4678899995 999987 555 89999999999875
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=99.84 E-value=3.3e-21 Score=167.45 Aligned_cols=173 Identities=14% Similarity=0.107 Sum_probs=135.9
Q ss_pred CCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceEEEEEE
Q 012188 181 SRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHIVAH 260 (468)
Q Consensus 181 ~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i~lvGh 260 (468)
+|||||+||++++...+..+.+.|. ++||.++.+|.+|+|.+..... .+.+++.+++ ..++++++.++++++||
T Consensus 2 ~~PVv~vHG~~~~~~~~~~l~~~l~---~~g~~~~~~~~~~~~~~~~~~~--~~~~~l~~~i-~~~~~~~~~~~v~lvGH 75 (179)
T d1ispa_ 2 HNPVVMVHGIGGASFNFAGIKSYLV---SQGWSRDKLYAVDFWDKTGTNY--NNGPVLSRFV-QKVLDETGAKKVDIVAH 75 (179)
T ss_dssp CCCEEEECCTTCCGGGGHHHHHHHH---HTTCCGGGEEECCCSCTTCCHH--HHHHHHHHHH-HHHHHHHCCSCEEEEEE
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHH---HcCCeEEEEecCCccccccccc--hhhhhHHHHH-HHHHHhcCCceEEEEee
Confidence 5689999999988776667888886 5899999999999998865542 4566777777 68888899999999999
Q ss_pred cccHHHHHHHHHhC--CCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHHhhcc
Q 012188 261 SLGCILALALAVKH--PGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKN 338 (468)
Q Consensus 261 S~Gg~ial~~a~~~--p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (468)
||||.++..++.++ |++|+++|+++++....... .
T Consensus 76 SmGG~va~~~~~~~~~~~~V~~~V~l~~p~~g~~~~---------------~---------------------------- 112 (179)
T d1ispa_ 76 SMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTGK---------------A---------------------------- 112 (179)
T ss_dssp THHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCSB---------------C----------------------------
T ss_pred cCcCHHHHHHHHHcCCchhhCEEEEECCCCCCchhh---------------h----------------------------
Confidence 99999999999887 67899999999864221000 0
Q ss_pred chhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChhhHHH
Q 012188 339 HRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYN 418 (468)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~ 418 (468)
+ .. ......+|++.++|+.|.++++..+
T Consensus 113 -----------------------l-----------------------~~----~~~~~~~~~~~i~~~~D~~v~~~~~-- 140 (179)
T d1ispa_ 113 -----------------------L-----------------------PG----TDPNQKILYTSIYSSADMIVMNYLS-- 140 (179)
T ss_dssp -----------------------C-----------------------CC----SCTTCCCEEEEEEETTCSSSCHHHH--
T ss_pred -----------------------c-----------------------CC----cccccCceEEEEEecCCcccCchhh--
Confidence 0 00 0012368999999999999998643
Q ss_pred HHHhCCCCeEEEecCCCccccccCcHHHHHHHHHHHHhhcC
Q 012188 419 VQRKIPRARVKVIEKKDHITIVVGRQKTFARELEEIWRSSS 459 (468)
Q Consensus 419 l~~~~p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~ 459 (468)
.+++++.+.+++.+|..+. .+| ++.+.+.+||+...
T Consensus 141 ---~l~~~~~~~~~~~~H~~l~-~~~-~v~~~i~~~L~~~~ 176 (179)
T d1ispa_ 141 ---RLDGARNVQIHGVGHIGLL-YSS-QVNSLIKEGLNGGG 176 (179)
T ss_dssp ---CCBTSEEEEESSCCTGGGG-GCH-HHHHHHHHHHTTTC
T ss_pred ---cCCCceEEEECCCCchhhc-cCH-HHHHHHHHHHhccC
Confidence 5789999999999999886 666 78999999997654
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Probab=99.82 E-value=5.3e-19 Score=166.97 Aligned_cols=211 Identities=14% Similarity=0.046 Sum_probs=124.6
Q ss_pred CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCC-----------------CHHHHHHHH
Q 012188 180 SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLY-----------------TVREHLDMI 242 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~-----------------t~~~~~~di 242 (468)
+.|+||++||++++...+......|+ ++||.|+++|+||||.|..+..... .....+.+.
T Consensus 81 ~~P~vv~~HG~~~~~~~~~~~~~~la---~~Gy~vi~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 157 (318)
T d1l7aa_ 81 PHPAIVKYHGYNASYDGEIHEMVNWA---LHGYATFGMLVRGQQRSEDTSISPHGHALGWMTKGILDKDTYYYRGVYLDA 157 (318)
T ss_dssp CEEEEEEECCTTCCSGGGHHHHHHHH---HTTCEEEEECCTTTSSSCCCCCCSSCCSSSSTTTTTTCTTTCHHHHHHHHH
T ss_pred CceEEEEecCCCCCccchHHHHHHHH---HCCCEEEEEeeCCCCCCCCCcccchhhhhcchhhchhhhhhhhhHHHHHHH
Confidence 34789999998877665555666665 5899999999999999976543110 111122222
Q ss_pred H---HHHhcc--cCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhh
Q 012188 243 E---KSVIEP--NKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFG 317 (468)
Q Consensus 243 ~---~~l~~~--l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (468)
. ..+... ....++.++|+|+||..++..+...+. +.+.+...+.... ............ +...
T Consensus 158 ~~~~~~l~~~~~v~~~~i~~~G~s~Gg~~~~~~~~~~~~-~~~~~~~~~~~~~-------~~~~~~~~~~~~-~~~~--- 225 (318)
T d1l7aa_ 158 VRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVADYPYLSN-------FERAIDVALEQP-YLEI--- 225 (318)
T ss_dssp HHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEESCCSCC-------HHHHHHHCCSTT-TTHH---
T ss_pred HHHHHHHHhcccccCcceEEEeeccccHHHHHHhhcCcc-cceEEEecccccc-------HHHHhhcccccc-cchh---
Confidence 1 122222 223579999999999999999999875 6676666654322 122211111100 0000
Q ss_pred hhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCC
Q 012188 318 ASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVK 397 (468)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 397 (468)
..+.. ....... ..... ... .........++++
T Consensus 226 ---~~~~~-----------~~~~~~~----------~~~~~----------------~~~-------~~~~~~~~~~~i~ 258 (318)
T d1l7aa_ 226 ---NSFFR-----------RNGSPET----------EVQAM----------------KTL-------SYFDIMNLADRVK 258 (318)
T ss_dssp ---HHHHH-----------HSCCHHH----------HHHHH----------------HHH-------HTTCHHHHGGGCC
T ss_pred ---hhhhh-----------ccccccc----------ccccc----------------ccc-------cccccccccccCC
Confidence 00000 0000000 00000 000 0001122346789
Q ss_pred CcEEEEeeCCCCccChhhHHHHHHhCC-CCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 398 CDVNVFHGEDDELIPVECSYNVQRKIP-RARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 398 ~PvLii~G~~D~~vp~~~~~~l~~~~p-~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
+|+|+++|++|.++|++.+..+++.++ +.++++++|+||.... + +.+++.+||++
T Consensus 259 ~P~Lii~G~~D~~vp~~~~~~~~~~l~~~~~l~~~~~~gH~~~~-~----~~~~~~~fl~~ 314 (318)
T d1l7aa_ 259 VPVLMSIGLIDKVTPPSTVFAAYNHLETKKELKVYRYFGHEYIP-A----FQTEKLAFFKQ 314 (318)
T ss_dssp SCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCSSCCH-H----HHHHHHHHHHH
T ss_pred CCEEEEEECCCCCcCHHHHHHHHHHcCCCcEEEEECCCCCCCcH-H----HHHHHHHHHHH
Confidence 999999999999999999999999987 5799999999997653 4 44455555544
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=99.79 E-value=3.4e-19 Score=164.14 Aligned_cols=219 Identities=10% Similarity=0.040 Sum_probs=138.1
Q ss_pred CCCceeEEEe---c--CCCCeEEEEecCCCCcc--chhhhhhhccccCCCcceEEEECCCCCCCCCCCCC-------CCC
Q 012188 168 DCDCKFCTCW---S--SSSRDTLFVKTQGPSAF--WTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD-------SLY 233 (468)
Q Consensus 168 d~~~~~~~~~---~--~~~p~vl~lHG~g~s~~--~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~-------~~~ 233 (468)
||..+....+ . ++.|+||++||++.+.. .+..+...|+ ++||.|+++|+||+|.+..... ...
T Consensus 21 dG~~i~~~l~~p~~~~~~~Pviv~~HGG~~~~~~~~~~~~~~~la---~~G~~v~~~d~r~~~~~g~~~~~~~~~~~~~~ 97 (260)
T d2hu7a2 21 DGSRVPTYVLESGRAPTPGPTVVLVHGGPFAEDSDSWDTFAASLA---AAGFHVVMPNYRGSTGYGEEWRLKIIGDPCGG 97 (260)
T ss_dssp TSCEEEEEEEEETTSCSSEEEEEEECSSSSCCCCSSCCHHHHHHH---HHTCEEEEECCTTCSSSCHHHHHTTTTCTTTH
T ss_pred CCCEEEEEEEeCCCCCCCceEEEEECCCCccCCCccccHHHHHHH---hhccccccceeeeccccccccccccccccchh
Confidence 5555544433 2 22468999999654322 1223444444 5899999999999877632210 112
Q ss_pred CHHHHHHHHHHHHhcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCch
Q 012188 234 TVREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPL 313 (468)
Q Consensus 234 t~~~~~~di~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (468)
.++|..+.+ ..+.+....+++.++|+|+||.+++.++..+|+.+++++..+|.... ...... .
T Consensus 98 ~~~D~~~~~-~~l~~~~~~~~~~i~g~s~gg~~~~~~~~~~~~~~~a~i~~~~~~~~--------~~~~~~-~------- 160 (260)
T d2hu7a2 98 ELEDVSAAA-RWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDW--------EEMYEL-S------- 160 (260)
T ss_dssp HHHHHHHHH-HHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTSSSEEEEESCCCCH--------HHHHHT-C-------
T ss_pred hhhhhcccc-cccccccccceeeccccccccccccchhccCCcccccccccccchhh--------hhhhcc-c-------
Confidence 244555555 45666666679999999999999999999999999999998876532 000000 0
Q ss_pred hhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhh
Q 012188 314 IAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVR 393 (468)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (468)
...+. .......... ...+. .......+
T Consensus 161 -------~~~~~-----------------~~~~~~~~~~---------------~~~~~-------------~~~~~~~~ 188 (260)
T d2hu7a2 161 -------DAAFR-----------------NFIEQLTGGS---------------REIMR-------------SRSPINHV 188 (260)
T ss_dssp -------CHHHH-----------------HHHHHHHCSC---------------HHHHH-------------HTCGGGCG
T ss_pred -------ccccc-----------------cccccccccc---------------ccccc-------------ccchhhcc
Confidence 00000 0000000000 00000 00011123
Q ss_pred ccCCCcEEEEeeCCCCccChhhHHHHHHhC----CCCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 394 NHVKCDVNVFHGEDDELIPVECSYNVQRKI----PRARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 394 ~~i~~PvLii~G~~D~~vp~~~~~~l~~~~----p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
.++++|+|++||++|.++|++.+..+.+.+ ..++++++||+||.....++...+.+.+.+||++.
T Consensus 189 ~~~~~P~liihG~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~e~~~~~~~~~~~fl~~h 257 (260)
T d2hu7a2 189 DRIKEPLALIHPQNDSRTPLKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAVFFLATQ 257 (260)
T ss_dssp GGCCSCEEEEEETTCSSSCSHHHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCceeeecccCceecHHHHHHHHHHHHHCCCCeEEEEECcCCCCCCChHhHHHHHHHHHHHHHHH
Confidence 577899999999999999999998888765 34689999999998765577778888999999763
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Probab=99.79 E-value=4.9e-19 Score=160.40 Aligned_cols=197 Identities=16% Similarity=0.105 Sum_probs=121.5
Q ss_pred cCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCC---CCCHHHHH-------HHHHHHHh
Q 012188 178 SSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDS---LYTVREHL-------DMIEKSVI 247 (468)
Q Consensus 178 ~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~---~~t~~~~~-------~di~~~l~ 247 (468)
.+++|+||++||++++...+..+.+.|+ ++||.|+++|+||||.|..+... .....+.. +++ ..+.
T Consensus 21 ~~~~~~vl~lHG~~~~~~~~~~~~~~la---~~G~~V~~~D~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 96 (238)
T d1ufoa_ 21 EAPKALLLALHGLQGSKEHILALLPGYA---ERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYRVALGFKEEA-RRVA 96 (238)
T ss_dssp SSCCEEEEEECCTTCCHHHHHHTSTTTG---GGTEEEEECCCTTSTTSSCCCCCTTSTTHHHHHHHHHHHHHHHH-HHHH
T ss_pred CCCCeEEEEeCCCCCCHHHHHHHHHHHH---HCCCEEEEecCCCCCCCcccccccccchhhhhhhhhHHhHHHHH-HHHh
Confidence 4556899999999988776666777666 68999999999999999765431 11112211 122 1111
Q ss_pred ---cccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHH
Q 012188 248 ---EPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWY 324 (468)
Q Consensus 248 ---~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (468)
.....+++.++|+|+||.+++.++.++|+....+.++.+......... .... ...
T Consensus 97 ~~~~~~~~~~v~~~G~S~Gg~~a~~~~~~~p~~~~~~~~~~~~~~~~~~~~-------------~~~~-------~~~-- 154 (238)
T d1ufoa_ 97 EEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKLPQG-------------QVVE-------DPG-- 154 (238)
T ss_dssp HHHHHHHCCCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCCCCTT-------------CCCC-------CHH--
T ss_pred hhccccCCceEEEEEecccHHHHHHHHhcCcchhheeeeeeeccccccccc-------------cccc-------ccc--
Confidence 122346899999999999999999999965444444443322211100 0000 000
Q ss_pred HHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEe
Q 012188 325 EHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFH 404 (468)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~ 404 (468)
... .. . . ..........++|+|++|
T Consensus 155 ----------------~~~------------~~--~-------------------~------~~~~~~~~~~~~P~li~~ 179 (238)
T d1ufoa_ 155 ----------------VLA------------LY--Q-------------------A------PPATRGEAYGGVPLLHLH 179 (238)
T ss_dssp ----------------HHH------------HH--H-------------------S------CGGGCGGGGTTCCEEEEE
T ss_pred ----------------ccc------------hh--h-------------------h------hhhhhhhhhcCCCeEEEE
Confidence 000 00 0 0 000001133478999999
Q ss_pred eCCCCccChhhHHHHHHhCC------CCeEEEecCCCccccccCcHHHHHHHHHHHHh
Q 012188 405 GEDDELIPVECSYNVQRKIP------RARVKVIEKKDHITIVVGRQKTFARELEEIWR 456 (468)
Q Consensus 405 G~~D~~vp~~~~~~l~~~~p------~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~ 456 (468)
|++|.++|.+.+.++++.+. +.++++++|+||...- +.-+...+-+.+||+
T Consensus 180 G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~g~gH~~~~-~~~~~~~~f~~~~l~ 236 (238)
T d1ufoa_ 180 GSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLTP-LMARVGLAFLEHWLE 236 (238)
T ss_dssp ETTCTTTTHHHHHHHHHHHGGGCTTCCEEEEEETTCCSSCCH-HHHHHHHHHHHHHHH
T ss_pred cCCCCccCHHHHHHHHHHHHhcCCCceEEEEEECCCCCccCH-HHHHHHHHHHHHHhc
Confidence 99999999999988887652 3578889999998653 444555555666654
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Probab=99.76 E-value=2.7e-17 Score=155.76 Aligned_cols=206 Identities=12% Similarity=0.034 Sum_probs=121.6
Q ss_pred CCCceeEEEec-----CCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCC----------
Q 012188 168 DCDCKFCTCWS-----SSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSL---------- 232 (468)
Q Consensus 168 d~~~~~~~~~~-----~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~---------- 232 (468)
||..+..+.+. ++.|+||++||++....++....... ++||.|+++|+||||.|..+....
T Consensus 64 dG~~l~~~l~~P~~~~~~~P~Vv~~hG~~~~~~~~~~~~~~a----~~G~~v~~~D~rG~G~s~~~~~~~~~~~~~~~~~ 139 (322)
T d1vlqa_ 64 RGQRIKGWLLVPKLEEEKLPCVVQYIGYNGGRGFPHDWLFWP----SMGYICFVMDTRGQGSGWLKGDTPDYPEGPVDPQ 139 (322)
T ss_dssp GGCEEEEEEEEECCSCSSEEEEEECCCTTCCCCCGGGGCHHH----HTTCEEEEECCTTCCCSSSCCCCCBCCSSSBCCC
T ss_pred CCcEEEEEEEeccCCCCCccEEEEecCCCCCcCcHHHHHHHH----hCCCEEEEeeccccCCCCCCcccccccccccccc
Confidence 56566654442 22368999999887665554343333 499999999999999996542100
Q ss_pred --------------CC----HHHHHHHHHHHHhcccC--CceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCC
Q 012188 233 --------------YT----VREHLDMIEKSVIEPNK--VKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVP 292 (468)
Q Consensus 233 --------------~t----~~~~~~di~~~l~~~l~--~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~ 292 (468)
.. ..+....+ ..+...-. .+++.++|+|+||.+++.++...| ++++++...+....
T Consensus 140 ~~~~~~~g~~~~~~~~~~~~~~d~~~a~-~~~~~~~~~d~~ri~~~G~S~GG~~a~~~~~~~~-~~~a~v~~~~~~~~-- 215 (322)
T d1vlqa_ 140 YPGFMTRGILDPRTYYYRRVFTDAVRAV-EAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKALLCDVPFLCH-- 215 (322)
T ss_dssp CSSSTTTTTTCTTTCHHHHHHHHHHHHH-HHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCEEEEESCCSCC--
T ss_pred ccchhhhchhhhhhhhhHHHHHHHHHHH-HHHHhcCCcCchhccccccccchHHHHHHHhcCC-CccEEEEeCCcccc--
Confidence 00 12233333 23333332 357999999999999999888876 68888887765432
Q ss_pred CCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHh
Q 012188 293 KGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWH 372 (468)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (468)
.......... ..+ ............ .......
T Consensus 216 -----~~~~~~~~~~-~~~-------------------------------~~~~~~~~~~~~-----------~~~~~~~ 247 (322)
T d1vlqa_ 216 -----FRRAVQLVDT-HPY-------------------------------AEITNFLKTHRD-----------KEEIVFR 247 (322)
T ss_dssp -----HHHHHHHCCC-TTH-------------------------------HHHHHHHHHCTT-----------CHHHHHH
T ss_pred -----HHHHHhhccc-cch-------------------------------hhHHhhhhcCcc-----------hhhhHHH
Confidence 1111111000 000 000000000000 0000000
Q ss_pred hHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChhhHHHHHHhCC-CCeEEEecCCCcccc
Q 012188 373 TLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIP-RARVKVIEKKDHITI 439 (468)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p-~~~l~~i~~~gH~~~ 439 (468)
... .........++++|+|+++|++|.++|++.+..+++.++ .++++++|+++|...
T Consensus 248 ~~~----------~~d~~~~a~~i~~P~Lv~~G~~D~~vp~~~~~~~~~~~~~~~~l~~~p~~~H~~~ 305 (322)
T d1vlqa_ 248 TLS----------YFDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNYYAGPKEIRIYPYNNHEGG 305 (322)
T ss_dssp HHH----------TTCHHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCTTTT
T ss_pred Hhh----------hhhHHHHHhcCCCCEEEEEeCCCCCcCHHHHHHHHHHCCCCeEEEEECCCCCCCc
Confidence 000 001122346789999999999999999999999999886 579999999999643
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.75 E-value=7.5e-18 Score=154.47 Aligned_cols=210 Identities=11% Similarity=0.068 Sum_probs=133.9
Q ss_pred cCCCCeEEEEecC--CCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceE
Q 012188 178 SSSSRDTLFVKTQ--GPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSF 255 (468)
Q Consensus 178 ~~~~p~vl~lHG~--g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i 255 (468)
++++|+++++||. +++...|..+.+.|. ..+.|+++|+||||.++... .+++++++.+...+.+..+..++
T Consensus 39 g~~~~~l~c~~~~~~gg~~~~y~~La~~L~----~~~~V~al~~pG~~~~e~~~---~s~~~~a~~~~~~i~~~~~~~P~ 111 (255)
T d1mo2a_ 39 GPGEVTVICCAGTAAISGPHEFTRLAGALR----GIAPVRAVPQPGYEEGEPLP---SSMAAVAAVQADAVIRTQGDKPF 111 (255)
T ss_dssp CSCSSEEEEECCCSSSCSGGGGHHHHHHHT----TTCCEEEECCTTSSTTCCEE---SSHHHHHHHHHHHHHHTTSSSCE
T ss_pred CCCCCeEEEECCCCCCCCHHHHHHHHHhcC----CCceEEEEeCCCcCCCCCCC---CCHHHHHHHHHHHHHHhCCCCCE
Confidence 4567899999983 455566666888887 78999999999999886544 48999999886567777888899
Q ss_pred EEEEEcccHHHHHHHHHhC---CCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHH
Q 012188 256 HIVAHSLGCILALALAVKH---PGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTIC 332 (468)
Q Consensus 256 ~lvGhS~Gg~ial~~a~~~---p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (468)
+|+||||||.+|+.+|.+. .+.+.+++++++....... .............. ....
T Consensus 112 ~L~GhS~Gg~vA~e~A~~l~~~g~~v~~lvlld~~~p~~~~---~~~~~~~~~~~~~~--~~~~---------------- 170 (255)
T d1mo2a_ 112 VVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQD---AMNAWLEELTATLF--DRET---------------- 170 (255)
T ss_dssp EEEECSTTHHHHHHHHHHHHHHTCCCSEEEEEECSCSSHHH---HHHHHHHHHHTTCC----------------------
T ss_pred EEEEeCCcHHHHHHHHHhhHhcCCCccEEEEECCCCCCCcc---chhhHHHHHHHHhh--cccc----------------
Confidence 9999999999999999875 4569999999975432100 00000000000000 0000
Q ss_pred HHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccC
Q 012188 333 LLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIP 412 (468)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp 412 (468)
..... ..... ......... .+ ....+.+|++++.+++|....
T Consensus 171 ------~~~~~--------~~l~a--------------~~~~~~~~~-------~~---~~~~~~~p~l~v~a~~~~~~~ 212 (255)
T d1mo2a_ 171 ------VRMDD--------TRLTA--------------LGAYDRLTG-------QW---RPRETGLPTLLVSAGEPMGPW 212 (255)
T ss_dssp ------CCCCH--------HHHHH--------------HHHHHHHHH-------HC---CCCCCCCCEEEEECCSSSSCC
T ss_pred ------ccCCH--------HHHHH--------------HHHHHHHHh-------cC---CCccccceEEEeecCCCCCcc
Confidence 00000 00000 000000000 00 014568999999998886544
Q ss_pred hhhHHHHHHhC-CCCeEEEecCCCccccccCcHHHHHHHHHHHHh
Q 012188 413 VECSYNVQRKI-PRARVKVIEKKDHITIVVGRQKTFARELEEIWR 456 (468)
Q Consensus 413 ~~~~~~l~~~~-p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~ 456 (468)
.. ..+.... ...+++.++| +|+.++.++++.+++.|.+||.
T Consensus 213 ~~--~~w~~~~~~~~~~~~v~G-~H~~ml~~~~~~~A~~i~~~L~ 254 (255)
T d1mo2a_ 213 PD--DSWKPTWPFEHDTVAVPG-DHFTMVQEHADAIARHIDAWLG 254 (255)
T ss_dssp TT--CCCCCCCCSSCEEEECCS-CCSSCSSCCHHHHHHHHHHHHT
T ss_pred hh--hHHHHhCCCCcEEEEECC-CCcccccccHHHHHHHHHHHhC
Confidence 32 2233333 3578999996 9987766789999999999995
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Probab=99.73 E-value=5.4e-18 Score=135.27 Aligned_cols=94 Identities=16% Similarity=0.211 Sum_probs=78.0
Q ss_pred CCCceeEEEecCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHh
Q 012188 168 DCDCKFCTCWSSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVI 247 (468)
Q Consensus 168 d~~~~~~~~~~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~ 247 (468)
+|..++|...+ ++|||||+||.. ..| .+.|+ ++|+|+++|+||||.|+.+ .++.+++++++ ..++
T Consensus 9 ~G~~l~y~~~G-~G~pvlllHG~~--~~w----~~~L~----~~yrvi~~DlpG~G~S~~p---~~s~~~~a~~i-~~ll 73 (122)
T d2dsta1 9 YGLNLVFDRVG-KGPPVLLVAEEA--SRW----PEALP----EGYAFYLLDLPGYGRTEGP---RMAPEELAHFV-AGFA 73 (122)
T ss_dssp TTEEEEEEEEC-CSSEEEEESSSG--GGC----CSCCC----TTSEEEEECCTTSTTCCCC---CCCHHHHHHHH-HHHH
T ss_pred CCEEEEEEEEc-CCCcEEEEeccc--ccc----ccccc----CCeEEEEEeccccCCCCCc---ccccchhHHHH-HHHH
Confidence 34557777766 689999999842 223 34455 8999999999999999865 37999999999 7999
Q ss_pred cccCCceEEEEEEcccHHHHHHHHHhCCC
Q 012188 248 EPNKVKSFHIVAHSLGCILALALAVKHPG 276 (468)
Q Consensus 248 ~~l~~~~i~lvGhS~Gg~ial~~a~~~p~ 276 (468)
+.+++++++++||||||.+++.+++..+.
T Consensus 74 ~~L~i~~~~viG~S~Gg~ia~~laa~~~~ 102 (122)
T d2dsta1 74 VMMNLGAPWVLLRGLGLALGPHLEALGLR 102 (122)
T ss_dssp HHTTCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred HHhCCCCcEEEEeCccHHHHHHHHhhccc
Confidence 99999999999999999999999997654
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Probab=99.72 E-value=5.2e-20 Score=173.79 Aligned_cols=101 Identities=14% Similarity=0.024 Sum_probs=66.6
Q ss_pred CceeEEEe---cCCCCeEEEEecCCCCccchhh-------hhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHH
Q 012188 170 DCKFCTCW---SSSSRDTLFVKTQGPSAFWTET-------LFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHL 239 (468)
Q Consensus 170 ~~~~~~~~---~~~~p~vl~lHG~g~s~~~~~~-------~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~ 239 (468)
+.++++.+ .++++||||+||++.+...|.. +...+. ++||+|+++|+||||+|..+.. .++..++.
T Consensus 44 ~~~~v~~~~p~~~~~~PvvllHG~~~~~~~w~~~~~~~~~~~~~~~---~~Gy~V~~~D~~G~G~S~~~~~-~~~~~~~~ 119 (318)
T d1qlwa_ 44 DQMYVRYQIPQRAKRYPITLIHGCCLTGMTWETTPDGRMGWDEYFL---RKGYSTYVIDQSGRGRSATDIS-AINAVKLG 119 (318)
T ss_dssp SCEEEEEEEETTCCSSCEEEECCTTCCGGGGSSCTTSCCCHHHHHH---HTTCCEEEEECTTSTTSCCCCH-HHHHHHTT
T ss_pred ceEEEEEECCCCCCCCcEEEECCCCCCcCccccCcccchhHHHHHH---hCCCEEEEecCCCCCCCCCccc-cCCHHHHH
Confidence 33444444 3456789999999987653322 222232 4999999999999999976542 23444555
Q ss_pred HHHHHHHhcccC--CceEEEEEEcccHHHHHHHHHhCC
Q 012188 240 DMIEKSVIEPNK--VKSFHIVAHSLGCILALALAVKHP 275 (468)
Q Consensus 240 ~di~~~l~~~l~--~~~i~lvGhS~Gg~ial~~a~~~p 275 (468)
+++ ...++.+. ..+..++|||+||.++..++..++
T Consensus 120 ~~~-~~~l~~~~~~~~~~~~~g~s~G~~~~~~~~~~~~ 156 (318)
T d1qlwa_ 120 KAP-ASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQF 156 (318)
T ss_dssp SSC-GGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCS
T ss_pred HHH-HHHHHHHhhcccccccccccchhHHHHHHhhhcC
Confidence 454 34555443 246778899999999887776554
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Probab=99.70 E-value=3.3e-17 Score=150.59 Aligned_cols=165 Identities=16% Similarity=0.123 Sum_probs=121.2
Q ss_pred CeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhc------ccCCceE
Q 012188 182 RDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIE------PNKVKSF 255 (468)
Q Consensus 182 p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~------~l~~~~i 255 (468)
|.||++||++++...+..+.+.|+ +.||.|+++|++|++..... ...++.+.+ +.+.+ .++.+++
T Consensus 53 P~Vv~~HG~~g~~~~~~~~a~~lA---~~Gy~V~~~d~~~~~~~~~~-----~~~d~~~~~-~~l~~~~~~~~~vD~~rI 123 (260)
T d1jfra_ 53 GAVVISPGFTAYQSSIAWLGPRLA---SQGFVVFTIDTNTTLDQPDS-----RGRQLLSAL-DYLTQRSSVRTRVDATRL 123 (260)
T ss_dssp EEEEEECCTTCCGGGTTTHHHHHH---TTTCEEEEECCSSTTCCHHH-----HHHHHHHHH-HHHHHTSTTGGGEEEEEE
T ss_pred cEEEEECCCCCCHHHHHHHHHHHH---hCCCEEEEEeeCCCcCCchh-----hHHHHHHHH-HHHHhhhhhhccccccce
Confidence 689999999887776666777776 79999999999987655311 122333333 23333 2344789
Q ss_pred EEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHHHHh
Q 012188 256 HIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTICLLI 335 (468)
Q Consensus 256 ~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (468)
.++|||+||.+++.++...+ ++++.|.+++.....
T Consensus 124 ~v~G~S~GG~~al~aa~~~~-~~~A~v~~~~~~~~~-------------------------------------------- 158 (260)
T d1jfra_ 124 GVMGHSMGGGGSLEAAKSRT-SLKAAIPLTGWNTDK-------------------------------------------- 158 (260)
T ss_dssp EEEEETHHHHHHHHHHHHCT-TCSEEEEESCCCSCC--------------------------------------------
T ss_pred EEEeccccchHHHHHHhhhc-cchhheeeecccccc--------------------------------------------
Confidence 99999999999999999887 688888877653220
Q ss_pred hccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccChhh
Q 012188 336 CKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIPVEC 415 (468)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~ 415 (468)
...++++|+|+++|++|.++|++.
T Consensus 159 --------------------------------------------------------~~~~~~~P~l~i~G~~D~~vp~~~ 182 (260)
T d1jfra_ 159 --------------------------------------------------------TWPELRTPTLVVGADGDTVAPVAT 182 (260)
T ss_dssp --------------------------------------------------------CCTTCCSCEEEEEETTCSSSCTTT
T ss_pred --------------------------------------------------------cccccccceeEEecCCCCCCCHHH
Confidence 013458999999999999999875
Q ss_pred -HHHHHHhCCC---CeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 416 -SYNVQRKIPR---ARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 416 -~~~l~~~~p~---~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
.+.+.+..+. .++++++|++|.... .....+.+.+..||+.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~i~ga~H~~~~-~~~~~~~~~~~~wl~~ 227 (260)
T d1jfra_ 183 HSKPFYESLPGSLDKAYLELRGASHFTPN-TSDTTIAKYSISWLKR 227 (260)
T ss_dssp THHHHHHHSCTTSCEEEEEETTCCTTGGG-SCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcccCCCEEEEEECCCccCCCC-CChHHHHHHHHHHHHH
Confidence 5666666653 378999999999875 4556677777888864
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.69 E-value=1.1e-16 Score=146.70 Aligned_cols=202 Identities=12% Similarity=0.121 Sum_probs=122.2
Q ss_pred CeEEEEecCCCC----ccchhh-hhhhccccCCCcceEEEECCCCCCCCC------CCCC-CCCCHHHHHHHHHHHHhcc
Q 012188 182 RDTLFVKTQGPS----AFWTET-LFPNFSSASKSTYRLFAIDLLGFGRSP------KPTD-SLYTVREHLDMIEKSVIEP 249 (468)
Q Consensus 182 p~vl~lHG~g~s----~~~~~~-~~~~L~~~~~~gy~Via~D~~G~G~S~------~~~~-~~~t~~~~~~di~~~l~~~ 249 (468)
|+||++||++++ ..|... ....|+ ++||.|+++|+||.+.+. .... ......+..+.+ ..++++
T Consensus 32 Pviv~~HGGp~~~~~~~~~~~~~~~~~la---~~G~~vv~~d~rGs~~~g~~~~~~~~~~~g~~~~~d~~~~i-~~l~~~ 107 (258)
T d1xfda2 32 PLLLVVDGTPGSQSVAEKFEVSWETVMVS---SHGAVVVKCDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAV-RTMLKE 107 (258)
T ss_dssp EEEEECCCCTTCCCCCCCCCCSHHHHHHH---TTCCEEECCCCTTCSSSHHHHHHTTTTCTTTHHHHHHHHHH-HHHHSS
T ss_pred eEEEEEcCCccccCcCCCcCcchHHHHHh---cCCcEEEEeccccccccchhHhhhhhccchhHHHHHHHHhh-hhhccc
Confidence 789999997442 222211 122343 589999999999854321 1111 112355566666 577776
Q ss_pred cCC--ceEEEEEEcccHHHHHHHHHhCCC----ccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHH
Q 012188 250 NKV--KSFHIVAHSLGCILALALAVKHPG----SVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACW 323 (468)
Q Consensus 250 l~~--~~i~lvGhS~Gg~ial~~a~~~p~----~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (468)
..+ ++++++|||+||.+++.++...++ .+...+...+........ ...........
T Consensus 108 ~~id~~ri~v~G~S~GG~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--------------- 169 (258)
T d1xfda2 108 QYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYA---SAFSERYLGLH--------------- 169 (258)
T ss_dssp SSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSSB---HHHHHHHHCCC---------------
T ss_pred ccccccceeccccCchHHHHHHHHhcCCcccceeeeeeeccccceeeeccc---ccccccccccc---------------
Confidence 554 589999999999999988877664 466666666544321111 00000000000
Q ss_pred HHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEE
Q 012188 324 YEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVF 403 (468)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii 403 (468)
... ...+ .............+.|+|++
T Consensus 170 -------------------------------------~~~----~~~~------------~~~s~~~~~~~~~~~p~Li~ 196 (258)
T d1xfda2 170 -------------------------------------GLD----NRAY------------EMTKVAHRVSALEEQQFLII 196 (258)
T ss_dssp -------------------------------------SSC----CSST------------TTTCTHHHHTSCCSCEEEEE
T ss_pred -------------------------------------ccc----hHHh------------hccchhhhhhhhhccccccc
Confidence 000 0000 00001111112236899999
Q ss_pred eeCCCCccChhhHHHHHHhC----CCCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 404 HGEDDELIPVECSYNVQRKI----PRARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 404 ~G~~D~~vp~~~~~~l~~~~----p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
||+.|..+|++.+.++.+.+ .+.+++++|+++|.....+....+.+.+.+||++.
T Consensus 197 hG~~D~~vp~~~s~~~~~~l~~~~~~~~~~~~p~~~H~~~~~~~~~~~~~~~~~f~~~~ 255 (258)
T d1xfda2 197 HPTADEKIHFQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSIINFFVEC 255 (258)
T ss_dssp EETTCSSSCHHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHHHHHTTT
T ss_pred ccCCCCCcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCcCHHHHHHHHHHHHHHh
Confidence 99999999999988776654 35689999999998764456677889999999874
|
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.68 E-value=2.5e-16 Score=141.78 Aligned_cols=178 Identities=15% Similarity=0.124 Sum_probs=114.5
Q ss_pred CCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCC--------------CCCCCCCCCCC---HHHHHHHH
Q 012188 180 SSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFG--------------RSPKPTDSLYT---VREHLDMI 242 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G--------------~S~~~~~~~~t---~~~~~~di 242 (468)
..++|||+||+|++...+..++..+. ..++.+++++-|.+. ......+...+ +++.++.+
T Consensus 20 ~~~~VI~lHG~G~~~~~~~~~~~~l~---~~~~~~v~p~Ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~i~~~~~~l 96 (229)
T d1fj2a_ 20 ATAAVIFLHGLGDTGHGWAEAFAGIR---SSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQEDESGIKQAAENI 96 (229)
T ss_dssp CSEEEEEECCSSSCHHHHHHHHHTTC---CTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTCCBCHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCHHHHHHHHHHhc---CCCCEEEeCCCCCCccccCCCcccccccccccccccchhhhHHHHHHHHHH
Confidence 34689999999887654444444443 578999998865321 11111111112 23333333
Q ss_pred HHHHhc---c--cCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhh
Q 012188 243 EKSVIE---P--NKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFG 317 (468)
Q Consensus 243 ~~~l~~---~--l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (468)
..+++ + ...++++++|+|+||.+|+.++.++|+++++++.+++........
T Consensus 97 -~~li~~~~~~~i~~~ri~l~GfS~Gg~~a~~~~~~~~~~~~gvi~~sg~lp~~~~~----------------------- 152 (229)
T d1fj2a_ 97 -KALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASF----------------------- 152 (229)
T ss_dssp -HHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGGS-----------------------
T ss_pred -HHHhhhhhhcCCCccceeeeecccchHHHHHHHHhhccccCccccccccccccccc-----------------------
Confidence 23332 1 345689999999999999999999999999999998643210000
Q ss_pred hhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCC
Q 012188 318 ASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVK 397 (468)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 397 (468)
.+ .... ..+.+
T Consensus 153 -----------------------------------------~~----------------------~~~~------~~~~~ 163 (229)
T d1fj2a_ 153 -----------------------------------------PQ----------------------GPIG------GANRD 163 (229)
T ss_dssp -----------------------------------------CS----------------------SCCC------STTTT
T ss_pred -----------------------------------------cc----------------------cccc------ccccc
Confidence 00 0000 01236
Q ss_pred CcEEEEeeCCCCccChhhHHHHHHhC------CCCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 398 CDVNVFHGEDDELIPVECSYNVQRKI------PRARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 398 ~PvLii~G~~D~~vp~~~~~~l~~~~------p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
+|++++||++|.+||.+.+++..+.+ .+++++++++.||... +++ .+.+.+||++.
T Consensus 164 ~Pvli~hG~~D~~vp~~~~~~~~~~L~~~~~~~~v~~~~~~g~gH~i~----~~~-~~~~~~wL~~~ 225 (229)
T d1fj2a_ 164 ISILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSC----QQE-MMDVKQFIDKL 225 (229)
T ss_dssp CCEEEEEETTCSSSCHHHHHHHHHHHHHHSCGGGEEEEEETTCCSSCC----HHH-HHHHHHHHHHH
T ss_pred CceeEEEcCCCCeeCHHHHHHHHHHHHhcCCCCceEEEEeCCCCCccC----HHH-HHHHHHHHHhH
Confidence 89999999999999999887665543 2468889999999754 233 46688899875
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.67 E-value=3.1e-15 Score=133.35 Aligned_cols=178 Identities=15% Similarity=0.190 Sum_probs=126.6
Q ss_pred CCCeEEEEecCC---CCccc--hhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCH-HHHHHHHHHHHhccc-CC
Q 012188 180 SSRDTLFVKTQG---PSAFW--TETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTV-REHLDMIEKSVIEPN-KV 252 (468)
Q Consensus 180 ~~p~vl~lHG~g---~s~~~--~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~-~~~~~di~~~l~~~l-~~ 252 (468)
+.+++|++||.+ ++... ...+...+. +.||.++.+|+||.|.|.+..+..... ++....+ ..+..+. ..
T Consensus 23 ~~~~~l~~Hp~p~~GG~~~~~~~~~~a~~l~---~~G~~~lrfn~RG~g~S~G~~~~~~~e~~d~~aa~-~~~~~~~~~~ 98 (218)
T d2i3da1 23 SAPIAIILHPHPQFGGTMNNQIVYQLFYLFQ---KRGFTTLRFNFRSIGRSQGEFDHGAGELSDAASAL-DWVQSLHPDS 98 (218)
T ss_dssp TCCEEEEECCCGGGTCCTTSHHHHHHHHHHH---HTTCEEEEECCTTSTTCCSCCCSSHHHHHHHHHHH-HHHHHHCTTC
T ss_pred CCCEEEEECCCcCcCCcCCcHHHHHHHHHHH---hcCeeEEEEecCccCCCccccccchhHHHHHHHHH-hhhhcccccc
Confidence 457899999853 33222 122344343 589999999999999998776532222 2223333 3444443 34
Q ss_pred ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHhhHHH
Q 012188 253 KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHISRTIC 332 (468)
Q Consensus 253 ~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (468)
.++.++|+|+||.+++.++.+.+ .+.+++++.++.......
T Consensus 99 ~~~~~~g~S~G~~~a~~~a~~~~-~~~~~~~~~~~~~~~~~~-------------------------------------- 139 (218)
T d2i3da1 99 KSCWVAGYSFGAWIGMQLLMRRP-EIEGFMSIAPQPNTYDFS-------------------------------------- 139 (218)
T ss_dssp CCEEEEEETHHHHHHHHHHHHCT-TEEEEEEESCCTTTSCCT--------------------------------------
T ss_pred cceeEEeeehHHHHHHHHHHhhc-cccceeeccccccccchh--------------------------------------
Confidence 68999999999999999998876 577888887765331100
Q ss_pred HHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCCCccC
Q 012188 333 LLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDDELIP 412 (468)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp 412 (468)
.+....+|+++++|+.|.++|
T Consensus 140 -----------------------------------------------------------~~~~~~~p~l~i~g~~D~~~~ 160 (218)
T d2i3da1 140 -----------------------------------------------------------FLAPCPSSGLIINGDADKVAP 160 (218)
T ss_dssp -----------------------------------------------------------TCTTCCSCEEEEEETTCSSSC
T ss_pred -----------------------------------------------------------hccccCCCceeeecccceecC
Confidence 013447899999999999999
Q ss_pred hhhHHHHHHhCC-----CCeEEEecCCCccccccCcHHHHHHHHHHHHhhcCCC
Q 012188 413 VECSYNVQRKIP-----RARVKVIEKKDHITIVVGRQKTFARELEEIWRSSSGH 461 (468)
Q Consensus 413 ~~~~~~l~~~~p-----~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~~~~ 461 (468)
......+.+.+. +.++++++|++|+.. .+.+++.+.+.+||++.-..
T Consensus 161 ~~~~~~l~~~~~~~~~~~~~~~vi~gAdHfF~--g~~~~l~~~v~~~l~~~l~~ 212 (218)
T d2i3da1 161 EKDVNGLVEKLKTQKGILITHRTLPGANHFFN--GKVDELMGECEDYLDRRLNG 212 (218)
T ss_dssp HHHHHHHHHHHTTSTTCCEEEEEETTCCTTCT--TCHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHhhccCCCccEEEeCCCCCCCc--CCHHHHHHHHHHHHHHhcCC
Confidence 999888776553 348999999999865 68899999999999875443
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.67 E-value=1.5e-15 Score=138.99 Aligned_cols=203 Identities=13% Similarity=0.057 Sum_probs=123.1
Q ss_pred CeEEEEecCCCC----ccchh-hhhhhccccCCCcceEEEECCCCCCCCCCC-----CC--CCCCHHHHHHHHHHHHhcc
Q 012188 182 RDTLFVKTQGPS----AFWTE-TLFPNFSSASKSTYRLFAIDLLGFGRSPKP-----TD--SLYTVREHLDMIEKSVIEP 249 (468)
Q Consensus 182 p~vl~lHG~g~s----~~~~~-~~~~~L~~~~~~gy~Via~D~~G~G~S~~~-----~~--~~~t~~~~~~di~~~l~~~ 249 (468)
|.||++||+++. ..+.. .....++ ++||.|+.+|+||+|.+... .. ......+....+ +.+.+.
T Consensus 33 P~iv~~HGGp~~~~~~~~~~~~~~~~~~a---~~g~~V~~~d~rg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 108 (258)
T d2bgra2 33 PLLLDVYAGPCSQKADTVFRLNWATYLAS---TENIIVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAA-RQFSKM 108 (258)
T ss_dssp EEEEECCCCTTCCCCCCCCCCSHHHHHHH---TTCCEEEEECCTTCSSSCHHHHGGGTTCTTSHHHHHHHHHH-HHHTTS
T ss_pred eEEEEEcCCCCcccCCCccCcCHHHHHHh---cCCcEEEeecccccCCcchHHHHhhhhhhhhHHHHHHHHHH-HHhhhh
Confidence 789999996332 11211 1112232 58999999999998754311 00 111233334444 455555
Q ss_pred cCC--ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHH
Q 012188 250 NKV--KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHI 327 (468)
Q Consensus 250 l~~--~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (468)
..+ +++.++|+|+||.+++.++..+|+.+...+..++........ ...........
T Consensus 109 ~~id~~~i~i~G~S~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~------------------- 166 (258)
T d2bgra2 109 GFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYD---SVYTERYMGLP------------------- 166 (258)
T ss_dssp SSEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGGSB---HHHHHHHHCCC-------------------
T ss_pred cccccccccccCcchhhcccccccccCCCcceEEEEeeccccccccc---ccccchhcccc-------------------
Confidence 443 479999999999999999999999888888777654321100 00000000000
Q ss_pred hhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccC-CCcEEEEeeC
Q 012188 328 SRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHV-KCDVNVFHGE 406 (468)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~PvLii~G~ 406 (468)
.... .... ..... ......++ ++|++++||+
T Consensus 167 ------------~~~~----------~~~~-------------------~~~~~-------~~~~~~~~~~~P~li~hG~ 198 (258)
T d2bgra2 167 ------------TPED----------NLDH-------------------YRNST-------VMSRAENFKQVEYLLIHGT 198 (258)
T ss_dssp ------------STTT----------THHH-------------------HHHSC-------SGGGGGGGGGSEEEEEEET
T ss_pred ------------cchh----------hHHH-------------------hhccc-------ccccccccccCChheeeec
Confidence 0000 0000 00000 00001122 4799999999
Q ss_pred CCCccChhhHHHHHHhC----CCCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 407 DDELIPVECSYNVQRKI----PRARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 407 ~D~~vp~~~~~~l~~~~----p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
+|..||++.++++.+.+ .+++++++|+++|.....+..+.+.+.+.+||++.
T Consensus 199 ~D~~Vp~~~s~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~i~~fl~~~ 254 (258)
T d2bgra2 199 ADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQC 254 (258)
T ss_dssp TCSSSCTHHHHHHHHHHHHHTCCCEEEEETTCCTTCCSHHHHHHHHHHHHHHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCccHHHHHHHHHHHHHHH
Confidence 99999999988887764 36799999999998654467788999999999875
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Probab=99.65 E-value=1.1e-15 Score=134.52 Aligned_cols=172 Identities=12% Similarity=0.090 Sum_probs=120.3
Q ss_pred cCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCC---C--CCCCCCHHHH-------HHHHHHH
Q 012188 178 SSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPK---P--TDSLYTVREH-------LDMIEKS 245 (468)
Q Consensus 178 ~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~---~--~~~~~t~~~~-------~~di~~~ 245 (468)
.+++|+||++||+|++...+..+.+.+. +++.|++++.+..+.... . .....+..+. .+.+ ..
T Consensus 11 ~~~~P~vi~lHG~g~~~~~~~~~~~~l~----~~~~vv~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~ 85 (202)
T d2h1ia1 11 DTSKPVLLLLHGTGGNELDLLPLAEIVD----SEASVLSVRGNVLENGMPRFFRRLAEGIFDEEDLIFRTKELNEFL-DE 85 (202)
T ss_dssp CTTSCEEEEECCTTCCTTTTHHHHHHHH----TTSCEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHH-HH
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHhc----cCCceeeecccccCCCCccccccCCCCCCchHHHHHHHHHHHHHH-HH
Confidence 3457899999999877665555777777 899999998654333211 0 0112233332 2222 34
Q ss_pred HhcccCC--ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHH
Q 012188 246 VIEPNKV--KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACW 323 (468)
Q Consensus 246 l~~~l~~--~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (468)
+.+..++ .+++++|+|+||.+++.++.++|+.+.+++++++........
T Consensus 86 ~~~~~~~d~~~i~~~G~S~Gg~~a~~la~~~~~~~~~~~~~~~~~~~~~~~----------------------------- 136 (202)
T d2h1ia1 86 AAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRGMQ----------------------------- 136 (202)
T ss_dssp HHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSSCC-----------------------------
T ss_pred HHHhccccccceeeecccccchHHHHHHHhccccccceeeecCCCCccccc-----------------------------
Confidence 4455554 599999999999999999999999999999998754321100
Q ss_pred HHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEE
Q 012188 324 YEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVF 403 (468)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii 403 (468)
.......|++++
T Consensus 137 --------------------------------------------------------------------~~~~~~~~~~i~ 148 (202)
T d2h1ia1 137 --------------------------------------------------------------------LANLAGKSVFIA 148 (202)
T ss_dssp --------------------------------------------------------------------CCCCTTCEEEEE
T ss_pred --------------------------------------------------------------------ccccccchhhcc
Confidence 002336899999
Q ss_pred eeCCCCccChhhHHHHHHhCC----CCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 404 HGEDDELIPVECSYNVQRKIP----RARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 404 ~G~~D~~vp~~~~~~l~~~~p----~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
||++|.++|++.++++.+.+. +.+++++++ ||.+. .+..+.+.+||++
T Consensus 149 ~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~g-gH~~~-----~~~~~~~~~wl~k 200 (202)
T d2h1ia1 149 AGTNDPICSSAESEELKVLLENANANVTMHWENR-GHQLT-----MGEVEKAKEWYDK 200 (202)
T ss_dssp EESSCSSSCHHHHHHHHHHHHTTTCEEEEEEESS-TTSCC-----HHHHHHHHHHHHH
T ss_pred cccCCCccCHHHHHHHHHHHHHCCCCEEEEEECC-CCcCC-----HHHHHHHHHHHHH
Confidence 999999999999988887764 358888986 89643 3456678889876
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.65 E-value=1.5e-15 Score=139.23 Aligned_cols=93 Identities=11% Similarity=0.176 Sum_probs=66.6
Q ss_pred CCCCeEEEEecCCC-----Cccchhhhhhhcc-ccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCC
Q 012188 179 SSSRDTLFVKTQGP-----SAFWTETLFPNFS-SASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKV 252 (468)
Q Consensus 179 ~~~p~vl~lHG~g~-----s~~~~~~~~~~L~-~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~ 252 (468)
+++|+|||+||+|. +...+..+.+.+. ...+.||.|+.+|+|..+....+ ..++|..+.+ ..+.+..+.
T Consensus 29 ~~~~~vv~iHGGg~~~~~~~~~~~~~~~~~l~~~~~~~g~~v~~~dYrl~p~~~~~----~~~~d~~~~~-~~l~~~~~~ 103 (263)
T d1vkha_ 29 NTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEITNP----RNLYDAVSNI-TRLVKEKGL 103 (263)
T ss_dssp TCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSCTT----HHHHHHHHHH-HHHHHHHTC
T ss_pred CCCcEEEEECCCCccCCCCCcchHHHHHHHHHHHHHhCCeEEEEeccccCcchhhh----HHHHhhhhhh-hcccccccc
Confidence 55789999999752 1222222333332 22368999999999976544322 3566777777 688888888
Q ss_pred ceEEEEEEcccHHHHHHHHHhCCC
Q 012188 253 KSFHIVAHSLGCILALALAVKHPG 276 (468)
Q Consensus 253 ~~i~lvGhS~Gg~ial~~a~~~p~ 276 (468)
++++|+|||+||.+++.++...++
T Consensus 104 ~~i~l~G~S~Gg~lal~~a~~~~~ 127 (263)
T d1vkha_ 104 TNINMVGHSVGATFIWQILAALKD 127 (263)
T ss_dssp CCEEEEEETHHHHHHHHHHTGGGS
T ss_pred cceeeeccCcHHHHHHHHHHhccC
Confidence 999999999999999999987765
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.63 E-value=3.4e-15 Score=131.44 Aligned_cols=174 Identities=10% Similarity=0.045 Sum_probs=122.2
Q ss_pred cCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCC--C---CCCCCHHHH---HHHHH---HHH
Q 012188 178 SSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKP--T---DSLYTVREH---LDMIE---KSV 246 (468)
Q Consensus 178 ~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~--~---~~~~t~~~~---~~di~---~~l 246 (468)
.++.|+||++||+|++...+..+.+.+. .++.|++++.+..+..... . ....+.++. ++.+. ...
T Consensus 14 ~~~~P~vi~lHG~G~~~~~~~~~~~~l~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 89 (203)
T d2r8ba1 14 VAGAPLFVLLHGTGGDENQFFDFGARLL----PQATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADFIKAN 89 (203)
T ss_dssp CTTSCEEEEECCTTCCHHHHHHHHHHHS----TTSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHhc----cCCeEEEeccccccccccccccccCccccchhHHHHHHHHHHHHHHHh
Confidence 4567999999998887665555777776 7899999987754444211 1 122233333 22321 122
Q ss_pred hcccCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHH
Q 012188 247 IEPNKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEH 326 (468)
Q Consensus 247 ~~~l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (468)
....+.++++++|+|+||.+++.++.++|+.+.+++++++........
T Consensus 90 ~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~-------------------------------- 137 (203)
T d2r8ba1 90 REHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEPKI-------------------------------- 137 (203)
T ss_dssp HHHHTCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCCCC--------------------------------
T ss_pred hhcCCCceEEEEEecCHHHHHHHHHHhhhhcccceeeecccccccccc--------------------------------
Confidence 234667899999999999999999999999999999999754321000
Q ss_pred HhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeC
Q 012188 327 ISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGE 406 (468)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~ 406 (468)
. ......|++++||+
T Consensus 138 -----------------------------------------------------------~------~~~~~~~~~i~hG~ 152 (203)
T d2r8ba1 138 -----------------------------------------------------------S------PAKPTRRVLITAGE 152 (203)
T ss_dssp -----------------------------------------------------------C------CCCTTCEEEEEEET
T ss_pred -----------------------------------------------------------c------cccccchhhccccC
Confidence 0 01336799999999
Q ss_pred CCCccChhhHHHHHHhCC----CCeEEEecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 407 DDELIPVECSYNVQRKIP----RARVKVIEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 407 ~D~~vp~~~~~~l~~~~p----~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
+|.++|++.++++.+.+. +++++++++ ||.+. + +..+.+.+||.+.
T Consensus 153 ~D~~vp~~~~~~~~~~L~~~g~~v~~~~~~g-gH~~~----~-~~~~~~~~wl~~~ 202 (203)
T d2r8ba1 153 RDPICPVQLTKALEESLKAQGGTVETVWHPG-GHEIR----S-GEIDAVRGFLAAY 202 (203)
T ss_dssp TCTTSCHHHHHHHHHHHHHHSSEEEEEEESS-CSSCC----H-HHHHHHHHHHGGG
T ss_pred CCCcccHHHHHHHHHHHHHCCCCEEEEEECC-CCcCC----H-HHHHHHHHHHHhc
Confidence 999999999988887663 358899986 89843 2 3456688999763
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Probab=99.61 E-value=7.2e-15 Score=130.07 Aligned_cols=106 Identities=16% Similarity=0.106 Sum_probs=73.2
Q ss_pred cCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCC-----CCCCCCCCCCCCHHHH-------HHHHHHH
Q 012188 178 SSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGF-----GRSPKPTDSLYTVREH-------LDMIEKS 245 (468)
Q Consensus 178 ~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~-----G~S~~~~~~~~t~~~~-------~~di~~~ 245 (468)
.++.|+||++||+|++...+..+.+.|. .++.+++++.+.. +..........+..+. .+.| ..
T Consensus 20 ~~~~p~vv~lHG~g~~~~~~~~l~~~l~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~ 94 (209)
T d3b5ea1 20 KESRECLFLLHGSGVDETTLVPLARRIA----PTATLVAARGRIPQEDGFRWFERIDPTRFEQKSILAETAAFAAFT-NE 94 (209)
T ss_dssp SSCCCEEEEECCTTBCTTTTHHHHHHHC----TTSEEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHH-HH
T ss_pred CCCCCEEEEEcCCCCCHHHHHHHHHHhc----cCcEEEeeccCcCcccCccccccCCccccchhhHHHHHHHHHHHH-HH
Confidence 3457899999999887665566778777 7899999876421 1111111112232322 2223 34
Q ss_pred HhcccC--CceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCC
Q 012188 246 VIEPNK--VKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPY 288 (468)
Q Consensus 246 l~~~l~--~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~ 288 (468)
+.++.+ .++++++|||+||.+++.++.++|++++++++++|..
T Consensus 95 ~~~~~~id~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~~v~~~g~~ 139 (209)
T d3b5ea1 95 AAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMP 139 (209)
T ss_dssp HHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCC
T ss_pred HHHHhCcccCCEEEEeeCChHHHHHHHHHhCCCcceEEEEeCCcc
Confidence 455544 4689999999999999999999999999999999754
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Probab=99.59 E-value=2.9e-15 Score=139.69 Aligned_cols=103 Identities=17% Similarity=0.187 Sum_probs=83.5
Q ss_pred CCCeEEEEecCCCCcc--chhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCceEEE
Q 012188 180 SSRDTLFVKTQGPSAF--WTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKSFHI 257 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~--~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~i~l 257 (468)
.++||||+||++.+.. |+..+.+.|. +.||+|+.+|+||+|.++.. .+.+++++.| +.+++..+.+++.|
T Consensus 30 ~~~PVvlvHG~~~~~~~~~~~~~~~~L~---~~Gy~v~~~d~~g~g~~d~~----~sae~la~~i-~~v~~~~g~~kV~l 101 (317)
T d1tcaa_ 30 VSKPILLVPGTGTTGPQSFDSNWIPLST---QLGYTPCWISPPPFMLNDTQ----VNTEYMVNAI-TALYAGSGNNKLPV 101 (317)
T ss_dssp CSSEEEEECCTTCCHHHHHTTTHHHHHH---TTTCEEEEECCTTTTCSCHH----HHHHHHHHHH-HHHHHHTTSCCEEE
T ss_pred CCCcEEEECCCCCCCcchhHHHHHHHHH---hCCCeEEEecCCCCCCCchH----hHHHHHHHHH-HHHHHhccCCceEE
Confidence 3468999999886533 3445777777 68999999999999987532 2456666777 68888899999999
Q ss_pred EEEcccHHHHHHHHHhCCC---ccceEEEecCCCCC
Q 012188 258 VAHSLGCILALALAVKHPG---SVKSLTLLAPPYYP 290 (468)
Q Consensus 258 vGhS~Gg~ial~~a~~~p~---~v~~lVl~~p~~~~ 290 (468)
|||||||.++..++.++|+ +|+.+|.++++...
T Consensus 102 VGhS~GG~~a~~~l~~~p~~~~~V~~~v~i~~~~~G 137 (317)
T d1tcaa_ 102 LTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKG 137 (317)
T ss_dssp EEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTC
T ss_pred EEeCchHHHHHHHHHHCCCcchheeEEEEeCCCCCC
Confidence 9999999999999999984 69999999988643
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Probab=99.58 E-value=1.2e-15 Score=144.30 Aligned_cols=105 Identities=16% Similarity=0.262 Sum_probs=88.0
Q ss_pred cCCCCeEEEEecCCCCcc------chhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccC
Q 012188 178 SSSSRDTLFVKTQGPSAF------WTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNK 251 (468)
Q Consensus 178 ~~~~p~vl~lHG~g~s~~------~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~ 251 (468)
..++.||||+||++++.. +|..+.+.|. ++||+|+++|+||+|.|+.+. ...+++++++ ..+++.++
T Consensus 5 ~~~k~PvvlvHG~~g~~~~~~~~~~~~~~~~~L~---~~G~~V~~~~~~g~g~s~~~~---~~~~~l~~~i-~~~~~~~~ 77 (319)
T d1cvla_ 5 AATRYPVILVHGLAGTDKFANVVDYWYGIQSDLQ---SHGAKVYVANLSGFQSDDGPN---GRGEQLLAYV-KQVLAATG 77 (319)
T ss_dssp TCCSSCEEEECCTTBSSEETTTEESSTTHHHHHH---HTTCCEEECCCBCSSCTTSTT---SHHHHHHHHH-HHHHHHHC
T ss_pred CCCCCCEEEECCCCCCcchhhhhhhHHHHHHHHH---HCCCEEEEecCCCCCCCCCCc---ccHHHHHHHH-HHHHHHhC
Confidence 445668999999877543 2334667776 589999999999999997655 3678888888 68899999
Q ss_pred CceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCC
Q 012188 252 VKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYY 289 (468)
Q Consensus 252 ~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~ 289 (468)
.+++++|||||||.++..++.++|++++++|++++|..
T Consensus 78 ~~~v~lvGhS~GG~~~~~~~~~~p~~v~~vv~i~~p~~ 115 (319)
T d1cvla_ 78 ATKVNLIGHSQGGLTSRYVAAVAPQLVASVTTIGTPHR 115 (319)
T ss_dssp CSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCTT
T ss_pred CCCEEEEeccccHHHHHHHHHHCccccceEEEECCCCC
Confidence 99999999999999999999999999999999998754
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Probab=99.57 E-value=2.7e-14 Score=128.52 Aligned_cols=188 Identities=12% Similarity=0.046 Sum_probs=117.3
Q ss_pred CCCceeEEEe---cCCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCC--------------
Q 012188 168 DCDCKFCTCW---SSSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD-------------- 230 (468)
Q Consensus 168 d~~~~~~~~~---~~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~-------------- 230 (468)
||..+..+.. +++.|.||++|+..+...+...+...|+ +.||.|+++|+.|.+.......
T Consensus 12 dg~~~~a~~~~P~~~~~P~vl~~h~~~G~~~~~~~~a~~lA---~~Gy~vl~pd~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (233)
T d1dina_ 12 DGHTFGALVGSPAKAPAPVIVIAQEIFGVNAFMRETVSWLV---DQGYAAVCPDLYARQAPGTALDPQDERQREQAYKLW 88 (233)
T ss_dssp TSCEECEEEECCSSSSEEEEEEECCTTBSCHHHHHHHHHHH---HTTCEEEEECGGGGTSTTCBCCTTSHHHHHHHHHHH
T ss_pred CCCEEEEEEECCCCCCceEEEEeCCCCCCCHHHHHHHHHHH---hcCCcceeeeeccCCCcCcccChHHHHHHHHHHHHh
Confidence 5555554444 3445889999976554444444555565 5899999999977555432211
Q ss_pred CCCCHHHHHHHHHHHHh---cccCC--ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCCCCCCchhhHHHHHhh
Q 012188 231 SLYTVREHLDMIEKSVI---EPNKV--KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYPVPKGAQASQYVMRKV 305 (468)
Q Consensus 231 ~~~t~~~~~~di~~~l~---~~l~~--~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~ 305 (468)
...+.+....++ ...+ ...+. +++.++|+|+||.+++.++.+.+ +.+.+..-+....
T Consensus 89 ~~~~~~~~~~d~-~aa~~~l~~~~~~~~~i~~~G~s~Gg~~a~~~a~~~~--~~~~~~~~~~~~~--------------- 150 (233)
T d1dina_ 89 QAFDMEAGVGDL-EAAIRYARHQPYSNGKVGLVGYCLGGALAFLVAAKGY--VDRAVGYYGVGLE--------------- 150 (233)
T ss_dssp HTCCHHHHHHHH-HHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHHHTC--SSEEEEESCSCGG---------------
T ss_pred hhhhhHHHHHHH-HHHHHHHHhCCCCCCceEEEEecccccceeecccccc--cceeccccccccc---------------
Confidence 112333344444 2222 22222 48999999999999999887633 4554443321100
Q ss_pred cCCCCCchhhhhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccc
Q 012188 306 APRRVWPLIAFGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKL 385 (468)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (468)
T Consensus 151 -------------------------------------------------------------------------------- 150 (233)
T d1dina_ 151 -------------------------------------------------------------------------------- 150 (233)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cchHHHhhccCCCcEEEEeeCCCCccChhhHHHHHHhC---CCCeEEEecCCCccccccCc-------HHHHHHHHHHHH
Q 012188 386 DGYLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKI---PRARVKVIEKKDHITIVVGR-------QKTFARELEEIW 455 (468)
Q Consensus 386 ~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~---p~~~l~~i~~~gH~~~~~e~-------p~~~~~~i~~fl 455 (468)
. ..+...++++|+|+++|++|+.+|.+..+.+.+.+ ++.+++++||++|..+.+.. .+.-.+.+.+||
T Consensus 151 -~-~~~~~~~i~~Pvl~~~G~~D~~vp~e~~~~~~~~~~~~~~~~~~~y~ga~HgF~~~~~~~y~~~aa~~a~~r~~~ff 228 (233)
T d1dina_ 151 -K-QLNKVPEVKHPALFHMGGQDHFVPAPSRQLITEGFGANPLLQVHWYEEAGHSFARTSSSGYVASAAALANERTLDFL 228 (233)
T ss_dssp -G-GGGGGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHTTCTTEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHH
T ss_pred -c-chhhhhccCCcceeeecccccCCCHHHHHHHHHHHhcCCCEEEEEECCCCcCCCCCCCccCCHHHHHHHHHHHHHHH
Confidence 0 00012467899999999999999999888776644 35689999999997653111 123346666888
Q ss_pred hhc
Q 012188 456 RSS 458 (468)
Q Consensus 456 ~~~ 458 (468)
...
T Consensus 229 a~~ 231 (233)
T d1dina_ 229 APL 231 (233)
T ss_dssp GGG
T ss_pred HcC
Confidence 654
|
| >d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Uncharacterized protein TM1040 2492 species: Silicibacter sp. tm1040 [TaxId: 292414]
Probab=99.50 E-value=5.7e-14 Score=128.41 Aligned_cols=178 Identities=10% Similarity=0.019 Sum_probs=110.8
Q ss_pred cCCCCeEEEEecCCC---CccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCce
Q 012188 178 SSSSRDTLFVKTQGP---SAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKVKS 254 (468)
Q Consensus 178 ~~~~p~vl~lHG~g~---s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~~~ 254 (468)
+.+.|+|||+||++. +...+..+...|. ++||.|+.+|+|..+....+ ..+++..+.+ +.+.++.. ++
T Consensus 59 ~~~~P~vv~iHGG~w~~g~~~~~~~~a~~l~---~~G~~Vv~~~YRl~p~~~~p----~~~~d~~~a~-~~~~~~~~-~r 129 (261)
T d2pbla1 59 GTPVGLFVFVHGGYWMAFDKSSWSHLAVGAL---SKGWAVAMPSYELCPEVRIS----EITQQISQAV-TAAAKEID-GP 129 (261)
T ss_dssp SSCSEEEEEECCSTTTSCCGGGCGGGGHHHH---HTTEEEEEECCCCTTTSCHH----HHHHHHHHHH-HHHHHHSC-SC
T ss_pred CCCCCeEEEECCCCCccCChhHhhhHHHHHh---cCCceeecccccccccccCc----hhHHHHHHHH-HHHHhccc-Cc
Confidence 445689999999763 2222233444454 58999999999975443211 1234444444 45555554 78
Q ss_pred EEEEEEcccHHHHHHHHHhCC------CccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhhhhhhhHHHHHHHh
Q 012188 255 FHIVAHSLGCILALALAVKHP------GSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIAFGASMACWYEHIS 328 (468)
Q Consensus 255 i~lvGhS~Gg~ial~~a~~~p------~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (468)
++|+|||.||.++..++.... ..+++++.+++.....+.... ....+. .
T Consensus 130 I~l~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~---~ 184 (261)
T d2pbla1 130 IVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLRT----------------------SMNEKF---K 184 (261)
T ss_dssp EEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGGS----------------------TTHHHH---C
T ss_pred eEEEEcchHHHHHHHHhcCcccccchhhchhhhhccccccccchhhhh----------------------hhcccc---c
Confidence 999999999999987765542 357889998877654111000 000000 0
Q ss_pred hHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhccCCCcEEEEeeCCC
Q 012188 329 RTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNHVKCDVNVFHGEDD 408 (468)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D 408 (468)
. ....... ........+...|+++++|++|
T Consensus 185 --------~------------~~~~~~~------------------------------~SP~~~~~~~~~P~li~~G~~D 214 (261)
T d2pbla1 185 --------M------------DADAAIA------------------------------ESPVEMQNRYDAKVTVWVGGAE 214 (261)
T ss_dssp --------C------------CHHHHHH------------------------------TCGGGCCCCCSCEEEEEEETTS
T ss_pred --------C------------CHHHHHH------------------------------hCchhhcccCCCeEEEEEecCC
Confidence 0 0000000 0000112455799999999999
Q ss_pred CccChhhHHHHHHhCCCCeEEEecCCCccccc
Q 012188 409 ELIPVECSYNVQRKIPRARVKVIEKKDHITIV 440 (468)
Q Consensus 409 ~~vp~~~~~~l~~~~p~~~l~~i~~~gH~~~~ 440 (468)
..++.++++.+.+.+ +++.+++++.+|+..+
T Consensus 215 ~~~~~~qs~~~~~~l-~~~~~~~~~~~HF~vi 245 (261)
T d2pbla1 215 RPAFLDQAIWLVEAW-DADHVIAFEKHHFNVI 245 (261)
T ss_dssp CHHHHHHHHHHHHHH-TCEEEEETTCCTTTTT
T ss_pred CchHHHHHHHHHHHh-CCCceEeCCCCchhHH
Confidence 999999999998887 5788899999997655
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.49 E-value=1.4e-14 Score=134.03 Aligned_cols=102 Identities=10% Similarity=0.112 Sum_probs=84.2
Q ss_pred cCCCCeEEEEecCCCCcc-----chhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCC
Q 012188 178 SSSSRDTLFVKTQGPSAF-----WTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEPNKV 252 (468)
Q Consensus 178 ~~~~p~vl~lHG~g~s~~-----~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~l~~ 252 (468)
...+-||||+||++++.. +|..+.+.|. +.||+|+++|++|+|.++ +..+++.++| ..+++.++.
T Consensus 4 ~~~~~PvvlvHG~~g~~~~~~~~yw~~i~~~L~---~~G~~v~~~~~~~~~~~~------~~a~~l~~~i-~~~~~~~g~ 73 (285)
T d1ex9a_ 4 TQTKYPIVLAHGMLGFDNILGVDYWFGIPSALR---RDGAQVYVTEVSQLDTSE------VRGEQLLQQV-EEIVALSGQ 73 (285)
T ss_dssp TCCSSCEEEECCTTCCSEETTEESSTTHHHHHH---HTTCCEEEECCCSSSCHH------HHHHHHHHHH-HHHHHHHCC
T ss_pred CCCCCCEEEECCCCCCccccchhhHHHHHHHHH---hCCCEEEEeCCCCCCCcH------HHHHHHHHHH-HHHHHHcCC
Confidence 345667999999876432 1335777776 579999999999998653 4567788888 688899999
Q ss_pred ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCC
Q 012188 253 KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYY 289 (468)
Q Consensus 253 ~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~ 289 (468)
+++++|||||||.++..++.++|++|+++|.+++|..
T Consensus 74 ~~v~ligHS~GG~~~r~~~~~~p~~v~~lv~i~tPh~ 110 (285)
T d1ex9a_ 74 PKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPHK 110 (285)
T ss_dssp SCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCTT
T ss_pred CeEEEEEECccHHHHHHHHHHCCccceeEEEECCCCC
Confidence 9999999999999999999999999999999998753
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.45 E-value=6.9e-13 Score=117.85 Aligned_cols=177 Identities=10% Similarity=0.102 Sum_probs=107.7
Q ss_pred CCCCeEEEEecCCCCccchhhhhhhccccCCCcceEEEECCCC--------CC-CC-----CCCCCCCCCHHHH---HHH
Q 012188 179 SSSRDTLFVKTQGPSAFWTETLFPNFSSASKSTYRLFAIDLLG--------FG-RS-----PKPTDSLYTVREH---LDM 241 (468)
Q Consensus 179 ~~~p~vl~lHG~g~s~~~~~~~~~~L~~~~~~gy~Via~D~~G--------~G-~S-----~~~~~~~~t~~~~---~~d 241 (468)
+.+++||++||+|++...+..+.+.+.... .++.+++++-|. .+ .+ ..........++. .+.
T Consensus 12 ~~~~~Vi~lHG~G~~~~~~~~~~~~l~~~~-~~~~~i~p~ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 90 (218)
T d1auoa_ 12 PADACVIWLHGLGADRYDFMPVAEALQESL-LTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELEVSAKM 90 (218)
T ss_dssp CCSEEEEEECCTTCCTTTTHHHHHHHHTTC-TTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHHHHHHHHH
T ss_pred CCCeEEEEEcCCCCChhhHHHHHHHHHHhC-CCcEEEccCCCccccccCCCcccCcccccccccccccchHHHHHHHHHH
Confidence 445689999998876654445666654211 356777766441 10 00 0011111222222 222
Q ss_pred HHHHHhc---c--cCCceEEEEEEcccHHHHHHHHHh-CCCccceEEEecCCCCCCCCCchhhHHHHHhhcCCCCCchhh
Q 012188 242 IEKSVIE---P--NKVKSFHIVAHSLGCILALALAVK-HPGSVKSLTLLAPPYYPVPKGAQASQYVMRKVAPRRVWPLIA 315 (468)
Q Consensus 242 i~~~l~~---~--l~~~~i~lvGhS~Gg~ial~~a~~-~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (468)
+ ..+++ . +..++++++|+|+||.+++.++.. .+..+.+++.+++.........
T Consensus 91 v-~~li~~~~~~~i~~~ri~l~GfSqGg~~a~~~~l~~~~~~~~~~v~~~g~~~~~~~~~-------------------- 149 (218)
T d1auoa_ 91 V-TDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTFGDEL-------------------- 149 (218)
T ss_dssp H-HHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTCCTTC--------------------
T ss_pred H-HHHHHHHHHhCCCCcceEEeeeCcchHHHHHHHHhcccccceeeeeccccCccccccc--------------------
Confidence 2 22222 2 344799999999999999988765 5667999999886432210000
Q ss_pred hhhhhHHHHHHHhhHHHHHhhccchhHHHHHHHHhhhHHHHHhhhccccccchhHHhhHhHHHhcccccccchHHHhhcc
Q 012188 316 FGASMACWYEHISRTICLLICKNHRVWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGTANKLDGYLDAVRNH 395 (468)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (468)
... ...
T Consensus 150 ----------------------------------------------------------------------~~~----~~~ 155 (218)
T d1auoa_ 150 ----------------------------------------------------------------------ELS----ASQ 155 (218)
T ss_dssp ----------------------------------------------------------------------CCC----HHH
T ss_pred ----------------------------------------------------------------------ccc----hhc
Confidence 000 011
Q ss_pred CCCcEEEEeeCCCCccChhhHHHHHHhCC----CCeEEEecCCCccccccCcHHHHHHHHHHHHhh
Q 012188 396 VKCDVNVFHGEDDELIPVECSYNVQRKIP----RARVKVIEKKDHITIVVGRQKTFARELEEIWRS 457 (468)
Q Consensus 396 i~~PvLii~G~~D~~vp~~~~~~l~~~~p----~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl~~ 457 (468)
.+.|++++||++|.++|.+.++++.+.+. ++++++++ +||... + +..+.+.+||.+
T Consensus 156 ~~~pvl~~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~-~gH~i~----~-~~~~~i~~wl~~ 215 (218)
T d1auoa_ 156 QRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYP-MGHEVL----P-QEIHDIGAWLAA 215 (218)
T ss_dssp HTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEES-CSSSCC----H-HHHHHHHHHHHH
T ss_pred cCCCEEEEecCCCCccCHHHHHHHHHHHHHCCCCEEEEEEC-CCCccC----H-HHHHHHHHHHHH
Confidence 26799999999999999999888877653 45888887 689653 2 345668888865
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Probab=99.40 E-value=1.2e-11 Score=117.85 Aligned_cols=122 Identities=12% Similarity=-0.007 Sum_probs=86.5
Q ss_pred CcCCCCceeEEEecCC----CCeEEEEecCCCCccch----hhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHH
Q 012188 165 RWSDCDCKFCTCWSSS----SRDTLFVKTQGPSAFWT----ETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVR 236 (468)
Q Consensus 165 r~~d~~~~~~~~~~~~----~p~vl~lHG~g~s~~~~----~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~ 236 (468)
...||.++....+.|. -|+||+.||++...... ......|+ ++||.|+++|.||+|.|++.........
T Consensus 11 pmrDGv~L~~~vy~P~~~~~~P~il~~~pyg~~~~~~~~~~~~~~~~~a---~~GY~vv~~d~RG~g~S~G~~~~~~~~~ 87 (347)
T d1ju3a2 11 PMRDGVRLAVDLYRPDADGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFV---RDGYAVVIQDTRGLFASEGEFVPHVDDE 87 (347)
T ss_dssp ECTTSCEEEEEEEEECCSSCEEEEEEEESSCTTCCHHHHTTSCCTHHHH---HTTCEEEEEECTTSTTCCSCCCTTTTHH
T ss_pred ECCCCCEEEEEEEEcCCCCCEEEEEEEcCCCCccccCcCcccHHHHHHH---HCCCEEEEEeeCCccccCCccccccchh
Confidence 3458888887766322 26788899976522211 11122232 5999999999999999988766444555
Q ss_pred HHHHHHHHHHhcccCC--ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCC
Q 012188 237 EHLDMIEKSVIEPNKV--KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 237 ~~~~di~~~l~~~l~~--~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~ 290 (468)
+...++. +.+..... .++.++|+|+||.+++.+|...|..+++++...+....
T Consensus 88 ~d~~d~i-~w~~~q~~~~grVg~~G~SygG~~~~~~A~~~~~~l~aiv~~~~~~d~ 142 (347)
T d1ju3a2 88 ADAEDTL-SWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADL 142 (347)
T ss_dssp HHHHHHH-HHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCT
T ss_pred hhHHHHH-HHHHhhccCCcceEeeeccccccchhhhhhcccccceeeeeccccchh
Confidence 5555553 44444332 59999999999999999999999999999999887643
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=99.25 E-value=5.5e-10 Score=108.29 Aligned_cols=79 Identities=8% Similarity=-0.082 Sum_probs=58.9
Q ss_pred CCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHH---HHHHhccc--------------C--CceEEEEEEcccHHHHHH
Q 012188 209 KSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMI---EKSVIEPN--------------K--VKSFHIVAHSLGCILALA 269 (468)
Q Consensus 209 ~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di---~~~l~~~l--------------~--~~~i~lvGhS~Gg~ial~ 269 (468)
++||.|+.+|.||+|.|++... ..+.++ .+|. ...+..+. . -.+|.++|+|+||++++.
T Consensus 134 ~~GYavv~~D~RG~g~S~G~~~-~~~~~e-~~D~~~~IeWl~~~~~~~~~~~~~~~~~q~WsnGkVGm~G~SY~G~~q~~ 211 (405)
T d1lnsa3 134 TRGFASIYVAGVGTRSSDGFQT-SGDYQQ-IYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLGTMAYG 211 (405)
T ss_dssp TTTCEEEEECCTTSTTSCSCCC-TTSHHH-HHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHHHHHHHH
T ss_pred hCCCEEEEECCCCCCCCCCccc-cCChhh-hhhHHHHHHHHHhcccccccccccccccccccCCeeEEEecCHHHHHHHH
Confidence 5899999999999999988664 233332 3333 12332211 0 148999999999999999
Q ss_pred HHHhCCCccceEEEecCCCC
Q 012188 270 LAVKHPGSVKSLTLLAPPYY 289 (468)
Q Consensus 270 ~a~~~p~~v~~lVl~~p~~~ 289 (468)
+|...|..++++|..++...
T Consensus 212 aA~~~pp~LkAivp~~~~~d 231 (405)
T d1lnsa3 212 AATTGVEGLELILAEAGISS 231 (405)
T ss_dssp HHTTTCTTEEEEEEESCCSB
T ss_pred HHhcCCccceEEEecCcccc
Confidence 99999999999999887654
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=99.25 E-value=6.8e-11 Score=112.93 Aligned_cols=120 Identities=11% Similarity=0.022 Sum_probs=75.3
Q ss_pred CCCCceeEEEe---c--CCCCeEEEEecCCC---Cccc--hhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHH
Q 012188 167 SDCDCKFCTCW---S--SSSRDTLFVKTQGP---SAFW--TETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVR 236 (468)
Q Consensus 167 ~d~~~~~~~~~---~--~~~p~vl~lHG~g~---s~~~--~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~ 236 (468)
.||..+..+.+ + ++.|.||++||+|. +..+ +..+...++ +.||.|+.+|+|..+...........++
T Consensus 87 ~dg~~i~~~iy~P~~~~~~~Pviv~~HGGG~~~gs~~~~~~~~~~~~la---~~g~~VvsvdYRla~~~~pe~~~p~~l~ 163 (358)
T d1jkma_ 87 VDGNEITLHVFRPAGVEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLA---AAGSVVVMVDFRNAWTAEGHHPFPSGVE 163 (358)
T ss_dssp TTSCEEEEEEEEETTCCSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHH---HTTCEEEEEECCCSEETTEECCTTHHHH
T ss_pred CCCCEEEEEEEecCCCCCCCCeEEEecCCeeeeccccccccchHHHHHH---hhhheeeeeeecccccccccCCCchhhH
Confidence 35655655544 2 22368999999864 2222 223444444 5899999999998633221111112355
Q ss_pred HHHHHHHHHHhc---ccCCceEEEEEEcccHHHHHHHHHh-----CCCccceEEEecCCCCC
Q 012188 237 EHLDMIEKSVIE---PNKVKSFHIVAHSLGCILALALAVK-----HPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 237 ~~~~di~~~l~~---~l~~~~i~lvGhS~Gg~ial~~a~~-----~p~~v~~lVl~~p~~~~ 290 (468)
|..+.+ +.+.+ .++.++++|+|+|.||.+++.++.. .+..+.++++..|....
T Consensus 164 D~~~a~-~wl~~~~~~~~~~ri~i~G~SAGG~La~~~a~~~~~~~~~~~~~~~~~~~p~~~~ 224 (358)
T d1jkma_ 164 DCLAAV-LWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISG 224 (358)
T ss_dssp HHHHHH-HHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCC
T ss_pred HHHHHH-HHHHHhccccCCccceeecccCchHHHHHHHHHHhhcCCCccccccccccceecc
Confidence 555555 45543 4677899999999999999877654 23467888888876554
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=99.25 E-value=4.4e-10 Score=108.05 Aligned_cols=123 Identities=11% Similarity=-0.065 Sum_probs=82.7
Q ss_pred CCcCCCCceeEEEecC----CCCeEEEEecCCCC-------ccchh----hhhhhccccCCCcceEEEECCCCCCCCCCC
Q 012188 164 PRWSDCDCKFCTCWSS----SSRDTLFVKTQGPS-------AFWTE----TLFPNFSSASKSTYRLFAIDLLGFGRSPKP 228 (468)
Q Consensus 164 ~r~~d~~~~~~~~~~~----~~p~vl~lHG~g~s-------~~~~~----~~~~~L~~~~~~gy~Via~D~~G~G~S~~~ 228 (468)
-...||..+...-+-+ +-|+||+.|+++.+ ..... ...+.|+ ++||.|+.+|.||+|.|++.
T Consensus 29 i~~rDG~~L~~~v~~P~~~~~~P~il~~~pYg~~~~~~~~~~~~~~~~~~~~~~~~a---~~Gy~vv~~d~RG~g~S~G~ 105 (381)
T d1mpxa2 29 IPMRDGVKLHTVIVLPKGAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFV---EGGYIRVFQDVRGKYGSEGD 105 (381)
T ss_dssp EECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHH---HTTCEEEEEECTTSTTCCSC
T ss_pred EECCCCCEEEEEEEEeCCCCCccEEEEEccCCCCCcccccccccccccchhHHHHHH---hCCCEEEEEecCccCCCCCc
Confidence 3445787787766622 23678888876531 11111 1112233 58999999999999999765
Q ss_pred CCC------------CCCHHHHHHHHHHHHhcccCC--ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCC
Q 012188 229 TDS------------LYTVREHLDMIEKSVIEPNKV--KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 229 ~~~------------~~t~~~~~~di~~~l~~~l~~--~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~ 290 (468)
... .....|..+.+ ..+.++..+ ++|.++|+|+||++++.+|...|..++++|...+....
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~D~~~~i-~w~~~~~~~~~~~vg~~G~SygG~~~~~~a~~~~~~l~a~v~~~~~~d~ 180 (381)
T d1mpxa2 106 YVMTRPLRGPLNPSEVDHATDAWDTI-DWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMIDG 180 (381)
T ss_dssp CCTTCCCSBTTBCSSCCHHHHHHHHH-HHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESCCCCT
T ss_pred eeccchhhhhcccchhHHHHHHHHHH-HHHhhcCCcCccceeeecccHHHHHHHHHHhccccccceeeeecccccc
Confidence 321 11344444444 345454333 58999999999999999999999999999999887653
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.16 E-value=1.8e-10 Score=107.71 Aligned_cols=106 Identities=19% Similarity=0.139 Sum_probs=66.7
Q ss_pred cCCCCeEEEEecCCC---CccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhc---ccC
Q 012188 178 SSSSRDTLFVKTQGP---SAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIE---PNK 251 (468)
Q Consensus 178 ~~~~p~vl~lHG~g~---s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~---~l~ 251 (468)
.++.|.||++||+|. +......+...+. .+.|+.|+.+|+|.......+ ..+++..+.+ ..+.+ +++
T Consensus 76 ~~~~P~il~iHGGg~~~g~~~~~~~~~~~l~--~~~g~~Vv~v~Yrlap~~~~p----~~~~d~~~a~-~~~~~~~~~~~ 148 (311)
T d1jjia_ 76 KPDSPVLVYYHGGGFVICSIESHDALCRRIA--RLSNSTVVSVDYRLAPEHKFP----AAVYDCYDAT-KWVAENAEELR 148 (311)
T ss_dssp SSSEEEEEEECCSTTTSCCTGGGHHHHHHHH--HHHTSEEEEEECCCTTTSCTT----HHHHHHHHHH-HHHHHTHHHHT
T ss_pred CCCceEEEEEcCCCCccCChhhhhhhhhhhh--hcCCcEEEEeccccccccccc----hhhhhhhhhh-hHHHHhHHHhC
Confidence 344578999999864 3333333444443 125999999999974333222 2344444444 33333 344
Q ss_pred C--ceEEEEEEcccHHHHHHHHHhC----CCccceEEEecCCCCC
Q 012188 252 V--KSFHIVAHSLGCILALALAVKH----PGSVKSLTLLAPPYYP 290 (468)
Q Consensus 252 ~--~~i~lvGhS~Gg~ial~~a~~~----p~~v~~lVl~~p~~~~ 290 (468)
+ +++++.|+|.||.+++.++... .....+.+++.|....
T Consensus 149 ~d~~ri~v~G~SaGG~la~~~~~~~~~~~~~~~~~~~l~~p~~~~ 193 (311)
T d1jjia_ 149 IDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNF 193 (311)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCS
T ss_pred cChhHEEEEeeecCCcceeechhhhhhccccccceeeeecceeee
Confidence 3 5899999999999888776542 3457888888887654
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.15 E-value=2.8e-10 Score=103.93 Aligned_cols=61 Identities=8% Similarity=-0.027 Sum_probs=46.1
Q ss_pred CCcEEEEeeCCCCccChhhHHHHHHhCC-----------CCeEEEecCCCccccccCcH--HHHHHHHHHHHhhc
Q 012188 397 KCDVNVFHGEDDELIPVECSYNVQRKIP-----------RARVKVIEKKDHITIVVGRQ--KTFARELEEIWRSS 458 (468)
Q Consensus 397 ~~PvLii~G~~D~~vp~~~~~~l~~~~p-----------~~~l~~i~~~gH~~~~~e~p--~~~~~~i~~fl~~~ 458 (468)
..|+|++||++|..||+.++.++.+.+. .+++++++++||.... ... .+....+.+||++.
T Consensus 200 ~pP~LiihG~~D~~Vp~~~s~~l~~aL~~~g~~~~~~~~~~~l~~~~~~gHgf~~-~~~~~~~~~~~~~~fl~k~ 273 (280)
T d1qfma2 200 YPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGK-PTAKVIEEVSDMFAFIARC 273 (280)
T ss_dssp CCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEESSCCSSTTC-CHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEeecccCCCCCHHHHHHHHHHHHHhhhhhhcCCCcEEEEEeCcCCCCCCC-cHHHHHHHHHHHHHHHHHh
Confidence 4489999999999999999998887762 2589999999997653 222 23344567888764
|
| >d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=99.10 E-value=7.5e-10 Score=103.11 Aligned_cols=115 Identities=11% Similarity=0.070 Sum_probs=68.3
Q ss_pred CCCceeEEEecC-----CCCeEEEEecCCC---CccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHH
Q 012188 168 DCDCKFCTCWSS-----SSRDTLFVKTQGP---SAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHL 239 (468)
Q Consensus 168 d~~~~~~~~~~~-----~~p~vl~lHG~g~---s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~ 239 (468)
+|..+..+.+.+ +.|.||++||+|. +...+..+...+.. +.++.|+.+|+|.......+ ...+|..
T Consensus 54 ~g~~i~~~~y~P~~~~~~~Pvvv~iHGGg~~~g~~~~~~~~~~~~a~--~~~~~v~~v~Yrl~p~~~~p----~~~~D~~ 127 (308)
T d1u4na_ 54 PGRTLKVRMYRPEGVEPPYPALVYYHGGGWVVGDLETHDPVCRVLAK--DGRAVVFSVDYRLAPEHKFP----AAVEDAY 127 (308)
T ss_dssp TTEEEEEEEEECTTCCSSEEEEEEECCSTTTSCCTTTTHHHHHHHHH--HHTSEEEEECCCCTTTSCTT----HHHHHHH
T ss_pred CCceEEEEEEeccccCCCCCEEEEEecCeeeeeccccccchhhhhhh--cccccccccccccccccccc----cccchhh
Confidence 444455554422 2368999999863 22233334444441 13567889999865433222 2344555
Q ss_pred HHHHHHHhcc---cCC--ceEEEEEEcccHHHHHHHHHhCCC----ccceEEEecCCCC
Q 012188 240 DMIEKSVIEP---NKV--KSFHIVAHSLGCILALALAVKHPG----SVKSLTLLAPPYY 289 (468)
Q Consensus 240 ~di~~~l~~~---l~~--~~i~lvGhS~Gg~ial~~a~~~p~----~v~~lVl~~p~~~ 289 (468)
+.+ ..+.+. +++ +++++.|+|.||.+++.++....+ .+.+..++.+...
T Consensus 128 ~~~-~~l~~~~~~~~~d~~ri~~~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (308)
T d1u4na_ 128 DAL-QWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTG 185 (308)
T ss_dssp HHH-HHHHTTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHHTCCCCCCEEEESCCCC
T ss_pred hhh-hHHHHhHHhcCCCcceEEEeeccccchhHHHHHHhhhhccCCCcccccccccccc
Confidence 555 455543 333 589999999999999988775432 4566667666544
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.08 E-value=4.9e-10 Score=104.93 Aligned_cols=87 Identities=13% Similarity=0.114 Sum_probs=55.9
Q ss_pred CCeEEEEecCCC---CccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH---hcccCC--
Q 012188 181 SRDTLFVKTQGP---SAFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSV---IEPNKV-- 252 (468)
Q Consensus 181 ~p~vl~lHG~g~---s~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l---~~~l~~-- 252 (468)
.|.||++||+|. +..+...+...+. .+.||.|+.+|+|.......+. .+++..+.+ ..+ .+.+++
T Consensus 78 ~Pvvv~iHGGG~~~g~~~~~~~~~~~la--~~~G~~V~~vdYrl~pe~~~~~----~~~d~~~~~-~~~~~~~~~~g~D~ 150 (317)
T d1lzla_ 78 VPVLLWIHGGGFAIGTAESSDPFCVEVA--RELGFAVANVEYRLAPETTFPG----PVNDCYAAL-LYIHAHAEELGIDP 150 (317)
T ss_dssp EEEEEEECCSTTTSCCGGGGHHHHHHHH--HHHCCEEEEECCCCTTTSCTTH----HHHHHHHHH-HHHHHTHHHHTEEE
T ss_pred CcEEEEecCcccccccccccchHHHhHH--hhcCCccccccccccccccccc----cccccccch-hHHHHHHHHhCCCH
Confidence 368999999763 3334434444443 1249999999999865543222 233333333 233 334444
Q ss_pred ceEEEEEEcccHHHHHHHHHhC
Q 012188 253 KSFHIVAHSLGCILALALAVKH 274 (468)
Q Consensus 253 ~~i~lvGhS~Gg~ial~~a~~~ 274 (468)
++++++|+|.||.+++.++.+.
T Consensus 151 ~rI~l~G~SaGg~la~~~~~~~ 172 (317)
T d1lzla_ 151 SRIAVGGQSAGGGLAAGTVLKA 172 (317)
T ss_dssp EEEEEEEETHHHHHHHHHHHHH
T ss_pred HHEEEEEeccccHHHHHHHhhh
Confidence 5899999999999999888754
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Probab=99.08 E-value=8.2e-10 Score=99.84 Aligned_cols=38 Identities=8% Similarity=0.051 Sum_probs=34.4
Q ss_pred CceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCC
Q 012188 252 VKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYY 289 (468)
Q Consensus 252 ~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~ 289 (468)
.++++++|+|+||..++.++.+||+++++++.+++...
T Consensus 134 ~~~i~i~G~S~GG~~a~~~a~~~Pd~F~~v~~~sg~~~ 171 (255)
T d1jjfa_ 134 REHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPN 171 (255)
T ss_dssp GGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCTT
T ss_pred cceeEeeeccchhHHHHHHHHhCCCcccEEEEEccCcC
Confidence 35799999999999999999999999999999987653
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.98 E-value=1.2e-08 Score=93.52 Aligned_cols=116 Identities=12% Similarity=-0.000 Sum_probs=72.5
Q ss_pred EEEecCCCCeEEEEecCCCC---ccchhhhhhhccccCCCcceEEEECCCCCCCC-C--C-----CCCCCCCHHHH-HHH
Q 012188 174 CTCWSSSSRDTLFVKTQGPS---AFWTETLFPNFSSASKSTYRLFAIDLLGFGRS-P--K-----PTDSLYTVREH-LDM 241 (468)
Q Consensus 174 ~~~~~~~~p~vl~lHG~g~s---~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S-~--~-----~~~~~~t~~~~-~~d 241 (468)
...-.++.|+|+|+||.++. ..|.. .........+.++.|+.+|-...+.. . . ........+++ +++
T Consensus 22 ~~~~~~~~p~lyllhG~~g~~d~~~W~~-~~~~~~~~~~~~~ivV~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 100 (280)
T d1dqza_ 22 VQFQGGGPHAVYLLDGLRAQDDYNGWDI-NTPAFEEYYQSGLSVIMPVGGQSSFYTDWYQPSQSNGQNYTYKWETFLTRE 100 (280)
T ss_dssp EEEECCSSSEEEECCCTTCCSSSCHHHH-HSCHHHHHTTSSSEEEEECCCTTCTTSBCSSSCTTTTCCSCCBHHHHHHTH
T ss_pred EEeeCCCCCEEEECCCCCCCCccchhhh-cchHHHHHHhCCcEEEEECCCCCCcCccccCCcccccCCcchhHHHHHHHH
Confidence 33335567899999997653 23432 11111122358999999995322211 1 0 11122334433 455
Q ss_pred HHHHHhccc--CCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCC
Q 012188 242 IEKSVIEPN--KVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 242 i~~~l~~~l--~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~ 290 (468)
+...+.+++ ..+++++.|+||||+.|+.+|.++|+++++++.+++....
T Consensus 101 l~~~i~~~~~~d~~r~~i~G~SmGG~~Al~lA~~~Pd~F~av~s~SG~~~~ 151 (280)
T d1dqza_ 101 MPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNP 151 (280)
T ss_dssp HHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCT
T ss_pred HHHHHHHhcCCCCCceEEEEechHHHHHHHHHHhCcCceeEEEEecCccCc
Confidence 533333443 3457899999999999999999999999999999987654
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.98 E-value=1.5e-08 Score=92.06 Aligned_cols=119 Identities=12% Similarity=0.071 Sum_probs=77.8
Q ss_pred ceeEEEecCCCCeEEEEecCCCC---ccchhhhhhhccccCCCcceEEEECCCCCC-CCCCCCCCCCCHHHHH-HHHHHH
Q 012188 171 CKFCTCWSSSSRDTLFVKTQGPS---AFWTETLFPNFSSASKSTYRLFAIDLLGFG-RSPKPTDSLYTVREHL-DMIEKS 245 (468)
Q Consensus 171 ~~~~~~~~~~~p~vl~lHG~g~s---~~~~~~~~~~L~~~~~~gy~Via~D~~G~G-~S~~~~~~~~t~~~~~-~di~~~ 245 (468)
.+......++.|+|+++||.++. ..|.. .........+.++.|+.+|--..+ .++.+.......++++ +++...
T Consensus 17 ~~~~~v~~~~~pvlylLhG~~g~~~~~~w~~-~~~~~~~~~~~~~iVV~p~g~~~~~y~~~~~~~~~~~~tfl~~eL~~~ 95 (267)
T d1r88a_ 17 DIPVAFLAGGPHAVYLLDAFNAGPDVSNWVT-AGNAMNTLAGKGISVVAPAGGAYSMYTNWEQDGSKQWDTFLSAELPDW 95 (267)
T ss_dssp EEEEEEECCSSSEEEEECCSSCCSSSCHHHH-TSCHHHHHTTSSSEEEEECCCTTSTTSBCSSCTTCBHHHHHHTHHHHH
T ss_pred eeeEEEECCCCCEEEEcCCCCCCCCcchhhh-ccHHHHHHhhCCeEEEEECCCCCcCCccccccccccHHHHHHHHHHHH
Confidence 35555556677999999996542 23543 222222334588999999842211 1222222234455444 355334
Q ss_pred HhcccCC--ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCC
Q 012188 246 VIEPNKV--KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 246 l~~~l~~--~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~ 290 (468)
+.+.++. +++.+.|+||||+.|+.+|.++|+++++++.+++....
T Consensus 96 i~~~~~~d~~r~~i~G~SmGG~~Al~la~~~Pd~F~av~~~SG~~~~ 142 (267)
T d1r88a_ 96 LAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYP 142 (267)
T ss_dssp HHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCT
T ss_pred HHHhcCCCCCceEEEEEcchHHHHHHHHHhCcccccEEEEeCCccCC
Confidence 4455543 58999999999999999999999999999999987654
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.97 E-value=1.6e-08 Score=92.91 Aligned_cols=109 Identities=14% Similarity=0.059 Sum_probs=72.8
Q ss_pred CCCCeEEEEecCCCCc---cchhh--hhhhccccCCCcceEEEECCCCCCCCCCCCC--------CCCCHH-HHHHHHHH
Q 012188 179 SSSRDTLFVKTQGPSA---FWTET--LFPNFSSASKSTYRLFAIDLLGFGRSPKPTD--------SLYTVR-EHLDMIEK 244 (468)
Q Consensus 179 ~~~p~vl~lHG~g~s~---~~~~~--~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~--------~~~t~~-~~~~di~~ 244 (468)
++.|+|+++||++++. .|... +...+. +.++.++.++..+.+....... .....+ .+++++..
T Consensus 32 ~~~Pvl~llhG~~~~~d~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~ 108 (288)
T d1sfra_ 32 ANSPALYLLDGLRAQDDFSGWDINTPAFEWYD---QSGLSVVMPVGGQSSFYSDWYQPACGKAGCQTYKWETFLTSELPG 108 (288)
T ss_dssp TTBCEEEEECCTTCCSSSCHHHHHCCHHHHHT---TSSCEEEEECCCTTCTTCBCSSCEEETTEEECCBHHHHHHTHHHH
T ss_pred CCceEEEEcCCCCCCCcchhhhhhccHHHHHH---hCCCEEEEeccCCCCCCccccCcccccccccchhHHHHHHHHhHH
Confidence 4458899999977532 23221 223333 5789999999877654432111 112223 23455534
Q ss_pred HHhcccCC--ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCC
Q 012188 245 SVIEPNKV--KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 245 ~l~~~l~~--~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~ 290 (468)
.+.++++. +++.+.|+||||+.|+.++.++|+++++++.+++....
T Consensus 109 ~i~~~~~~d~~r~~i~G~S~GG~~A~~~a~~~pd~f~av~~~Sg~~~~ 156 (288)
T d1sfra_ 109 WLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDP 156 (288)
T ss_dssp HHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCT
T ss_pred HHHHhcCCCCCceEEEEEccHHHHHHHHHHhccccccEEEEecCcccc
Confidence 44455443 57999999999999999999999999999999987654
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=98.96 E-value=1.2e-08 Score=98.09 Aligned_cols=123 Identities=10% Similarity=-0.065 Sum_probs=83.0
Q ss_pred CCcCCCCceeEEEec---CC-CCeEEEEecCCC--------Ccc----chhhhhhhccccCCCcceEEEECCCCCCCCCC
Q 012188 164 PRWSDCDCKFCTCWS---SS-SRDTLFVKTQGP--------SAF----WTETLFPNFSSASKSTYRLFAIDLLGFGRSPK 227 (468)
Q Consensus 164 ~r~~d~~~~~~~~~~---~~-~p~vl~lHG~g~--------s~~----~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~ 227 (468)
....||..+...-+. ++ -|+||+.|+++. ... ........|+ ++||.|+.+|.||+|.|.+
T Consensus 33 ipmrDG~~L~~~v~~P~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~a---~~Gy~vv~~d~RG~g~S~G 109 (385)
T d2b9va2 33 VPMRDGVKLYTVIVIPKNARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFV---EGGYIRVFQDIRGKYGSQG 109 (385)
T ss_dssp EECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHH---HTTCEEEEEECTTSTTCCS
T ss_pred EECCCCCEEEEEEEEcCCCCceeEEEEEccCCCCCccccCCcccccccccchHHHHHH---hCCcEEEEEcCCcccCCCC
Confidence 445688888887772 22 356666676542 111 1111222233 5899999999999999986
Q ss_pred CCCC------------CCCHHHHHHHHHHHHhcccCC--ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCC
Q 012188 228 PTDS------------LYTVREHLDMIEKSVIEPNKV--KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 228 ~~~~------------~~t~~~~~~di~~~l~~~l~~--~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~ 290 (468)
.... ....+|..+.| +.+.++... .+|.++|+|+||++++.+|...|..+++++...+....
T Consensus 110 ~~~~~~~~~~~~~~~~~~e~~D~~~~i-~w~~~q~~~~~g~vg~~G~SygG~~~~~~a~~~~~~l~a~~~~~~~~d~ 185 (385)
T d2b9va2 110 DYVMTRPPHGPLNPTKTDETTDAWDTV-DWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMVDG 185 (385)
T ss_dssp CCCTTCCCSBTTBCSSCCHHHHHHHHH-HHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEECCCT
T ss_pred ceeeccccccccccchhhHHHHHHHHH-HHHHhccCccccceeeccccHHHHHHHHHHhccCCcceEEEEecccccc
Confidence 5321 12345666655 455555333 58999999999999999999999999999988866543
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Probab=98.84 E-value=4.4e-09 Score=94.40 Aligned_cols=38 Identities=16% Similarity=0.220 Sum_probs=35.1
Q ss_pred ceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCC
Q 012188 253 KSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 253 ~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~ 290 (468)
+++.++|+||||+.++.++.+||+.+++++.+++....
T Consensus 123 ~~~~i~G~S~GG~~al~~~~~~P~~F~a~~~~sg~~~~ 160 (246)
T d3c8da2 123 DRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWW 160 (246)
T ss_dssp GGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTTT
T ss_pred cceEEEecCchhHHHhhhhccCCchhcEEEcCCccccc
Confidence 57999999999999999999999999999999987644
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.72 E-value=1.7e-09 Score=97.82 Aligned_cols=109 Identities=9% Similarity=0.092 Sum_probs=72.9
Q ss_pred CCC-eEEEEecCCCCcc-c--hhhhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcc--cCCc
Q 012188 180 SSR-DTLFVKTQGPSAF-W--TETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVIEP--NKVK 253 (468)
Q Consensus 180 ~~p-~vl~lHG~g~s~~-~--~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~~~--l~~~ 253 (468)
+.| |||++||.+++.. + ...+...+... -.|+.|+++++.....+.........+.+.++.+. ..+++ .+.+
T Consensus 3 ~~P~PVVLvHGlg~s~~~~~~m~~l~~~l~~~-~pG~~V~~l~~g~~~~~~~~~~~~~~~~~~~e~v~-~~I~~~~~~~~ 80 (279)
T d1ei9a_ 3 PAPLPLVIWHGMGDSCCNPLSMGAIKKMVEKK-IPGIHVLSLEIGKTLREDVENSFFLNVNSQVTTVC-QILAKDPKLQQ 80 (279)
T ss_dssp TSSCCEEEECCTTCCSCCTTTTHHHHHHHHHH-STTCCEEECCCSSSHHHHHHHHHHSCHHHHHHHHH-HHHHSCGGGTT
T ss_pred CCCCcEEEECCCCCCCCChHHHHHHHHHHHHH-CCCeEEEEEEcCCCcccccccchhhhHHHHHHHHH-HHHHhcccccc
Confidence 445 8999999876432 1 22344444311 14899999998654333211111235677777773 44433 2346
Q ss_pred eEEEEEEcccHHHHHHHHHhCCC-ccceEEEecCCCCC
Q 012188 254 SFHIVAHSLGCILALALAVKHPG-SVKSLTLLAPPYYP 290 (468)
Q Consensus 254 ~i~lvGhS~Gg~ial~~a~~~p~-~v~~lVl~~p~~~~ 290 (468)
++.+|||||||.++..++.++++ .|..+|.+++|...
T Consensus 81 ~v~lVGhSqGGLiaR~~i~~~~~~~V~~lITLgsPH~G 118 (279)
T d1ei9a_ 81 GYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQHQG 118 (279)
T ss_dssp CEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESCCTTC
T ss_pred ceeEEEEccccHHHHHHHHHcCCCCcceEEEECCCCCC
Confidence 89999999999999999999986 59999999987644
|
| >d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Dog (Canis familiaris) [TaxId: 9615]
Probab=98.64 E-value=1.5e-09 Score=100.53 Aligned_cols=109 Identities=12% Similarity=0.113 Sum_probs=69.1
Q ss_pred ecCCCCeEEEEecCCCCc--cchhhhhhhccccCCCcceEEEECCCCCCCCCCCCC-CCCCHHHHHHHH---HHHHhccc
Q 012188 177 WSSSSRDTLFVKTQGPSA--FWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD-SLYTVREHLDMI---EKSVIEPN 250 (468)
Q Consensus 177 ~~~~~p~vl~lHG~g~s~--~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~-~~~t~~~~~~di---~~~l~~~l 250 (468)
+++++|+++++|||.++. .|...+...+- ...+++||++|+.... +. ... .........+.+ ...+++..
T Consensus 66 f~~~~pt~iiiHGw~~~~~~~~~~~~~~a~l--~~~d~NVI~VDW~~~a-~~-~Y~~a~~n~~~Vg~~ia~~i~~l~~~~ 141 (337)
T d1rp1a2 66 FQTDKKTRFIIHGFIDKGEENWLLDMCKNMF--KVEEVNCICVDWKKGS-QT-SYTQAANNVRVVGAQVAQMLSMLSANY 141 (337)
T ss_dssp CCTTSEEEEEECCCCCTTCTTHHHHHHHHHT--TTCCEEEEEEECHHHH-SS-CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCcCCCCcchHHHHHHHHH--hcCCceEEEEeecccc-Cc-chHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 467899999999997643 35544444432 1367999999997532 11 100 001122222222 13344443
Q ss_pred C--CceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCC
Q 012188 251 K--VKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 251 ~--~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~ 290 (468)
+ .++++|||||+||.+|-.++ ++..++.+++.++|....
T Consensus 142 g~~~~~vhlIGhSLGAhvAG~aG-~~~~~l~rItgLDPA~P~ 182 (337)
T d1rp1a2 142 SYSPSQVQLIGHSLGAHVAGEAG-SRTPGLGRITGLDPVEAS 182 (337)
T ss_dssp CCCGGGEEEEEETHHHHHHHHHH-HTSTTCCEEEEESCCCTT
T ss_pred CCChhheEEEeecHHHhhhHHHH-HhhccccceeccCCCccc
Confidence 4 47999999999999997555 455689999999987644
|
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.61 E-value=1.7e-06 Score=84.35 Aligned_cols=110 Identities=13% Similarity=0.022 Sum_probs=69.9
Q ss_pred CCCeEEEEecCCCCccchhhhhhh---ccc-----------cCCCcceEEEECCC-CCCCCCCCCC-CCCCHHHHHHHHH
Q 012188 180 SSRDTLFVKTQGPSAFWTETLFPN---FSS-----------ASKSTYRLFAIDLL-GFGRSPKPTD-SLYTVREHLDMIE 243 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~~~~~~~---L~~-----------~~~~gy~Via~D~~-G~G~S~~~~~-~~~t~~~~~~di~ 243 (468)
+.|.++.+.|+|+++..+..+.+. .-. ...+-.+++.+|+| |.|.|..... ...+..+.+.|+.
T Consensus 47 ~~Pl~~wlnGGPG~SS~~g~~~e~GP~~v~~~~~~~~~N~~SW~~~anllfIDqPvGtGfS~~~~~~~~~~~~~~a~d~~ 126 (452)
T d1ivya_ 47 NSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAGVGFSYSDDKFYATNDTEVAQSNF 126 (452)
T ss_dssp GSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCGGGSSEEEEECCSTTSTTCEESSCCCCCBHHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHccCCcEEcCCCCeeccCCcchhcccCEEEEecCCCcccccCCCCCCCCCcHHHHHHHH
Confidence 468899999999965544323221 000 01134699999986 9999954332 2334455555552
Q ss_pred ---HHHhcc---cCCceEEEEEEcccHHHHHHHHHh----CCCccceEEEecCCCC
Q 012188 244 ---KSVIEP---NKVKSFHIVAHSLGCILALALAVK----HPGSVKSLTLLAPPYY 289 (468)
Q Consensus 244 ---~~l~~~---l~~~~i~lvGhS~Gg~ial~~a~~----~p~~v~~lVl~~p~~~ 289 (468)
..+++. +...+++|.|-|+||..+-.+|.. .+-.++++++.++...
T Consensus 127 ~~l~~f~~~fp~~~~~~~yi~GESYgG~y~P~ia~~i~~~~~i~l~Gi~igng~~d 182 (452)
T d1ivya_ 127 EALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGLSS 182 (452)
T ss_dssp HHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCCSB
T ss_pred HHHHHHHHhchhhcCCceEEeeccccchhhHHHHHHHHhcCcccccceEcCCCccC
Confidence 233333 344689999999999877777754 2335899999988754
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=98.59 E-value=4.1e-06 Score=82.21 Aligned_cols=69 Identities=7% Similarity=0.108 Sum_probs=56.0
Q ss_pred hHHHhhccCCCcEEEEeeCCCCccChhhHHHHHHhCC-------------------------------------CCeEEE
Q 012188 388 YLDAVRNHVKCDVNVFHGEDDELIPVECSYNVQRKIP-------------------------------------RARVKV 430 (468)
Q Consensus 388 ~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~p-------------------------------------~~~l~~ 430 (468)
.+..++.+ .++|||.+|+.|.++|....+.+.+.++ +.++..
T Consensus 364 ~l~~LL~~-girVLIy~Gd~D~icn~~Gte~~i~~L~w~g~~~f~~~~~~~~w~~~~~~~~~~~~vaG~~~~~~nltf~~ 442 (483)
T d1ac5a_ 364 LLPGLLES-GIEIVLFNGDKDLICNNKGVLDTIDNLKWGGIKGFSDDAVSFDWIHKSKSTDDSEEFSGYVKYDRNLTFVS 442 (483)
T ss_dssp GHHHHHHT-TCEEEEEEETTCSTTCHHHHHHHHHHCEETTEESSCTTCEEEEEEECSSTTCCCCSCCEEEEEETTEEEEE
T ss_pred HHHHHHHC-CCEEEEEECChhhcCCCHHHHHHHHhCCCccccccccCccccccccccccccCCcEEEEEEEEeCCeEEEE
Confidence 34455544 6899999999999999887777766541 346778
Q ss_pred ecCCCccccccCcHHHHHHHHHHHHhhc
Q 012188 431 IEKKDHITIVVGRQKTFARELEEIWRSS 458 (468)
Q Consensus 431 i~~~gH~~~~~e~p~~~~~~i~~fl~~~ 458 (468)
+.++||++.. ++|+...+.|..||.+.
T Consensus 443 V~~AGHmvP~-dqP~~a~~mi~~fl~~~ 469 (483)
T d1ac5a_ 443 VYNASHMVPF-DKSLVSRGIVDIYSNDV 469 (483)
T ss_dssp ETTCCSSHHH-HCHHHHHHHHHHHTTCC
T ss_pred ECCccccCcc-cCHHHHHHHHHHHhCCc
Confidence 9999999997 99999999999999864
|
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.58 E-value=1.3e-05 Score=77.09 Aligned_cols=111 Identities=14% Similarity=0.041 Sum_probs=71.3
Q ss_pred CCCeEEEEecCCCCccchhhhhh---h-------cc---ccCCCcceEEEECCC-CCCCCCCCCCCCCCHHHHHHHHH--
Q 012188 180 SSRDTLFVKTQGPSAFWTETLFP---N-------FS---SASKSTYRLFAIDLL-GFGRSPKPTDSLYTVREHLDMIE-- 243 (468)
Q Consensus 180 ~~p~vl~lHG~g~s~~~~~~~~~---~-------L~---~~~~~gy~Via~D~~-G~G~S~~~~~~~~t~~~~~~di~-- 243 (468)
..|.||.+.|+|+++..+..+.+ . +. ..-.+-.+++.+|.| |.|.|........+..+.++++.
T Consensus 43 ~~Pl~~WlnGGPG~SS~~g~~~e~GP~~i~~~~~~~~N~~sW~~~anllfiD~PvGtGfSy~~~~~~~~~~~~a~d~~~f 122 (421)
T d1wpxa1 43 KDPVILWLNGGPGCSSLTGLFFELGPSSIGPDLKPIGNPYSWNSNATVIFLDQPVNVGFSYSGSSGVSNTVAAGKDVYNF 122 (421)
T ss_dssp TSCEEEEECCTTTBCTHHHHHHTTSSEEECTTSCEEECTTCGGGSSEEEEECCSTTSTTCBCSSCCCCSHHHHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHhcCCcEECCCCccccCCcccccccCEEEEecCCCCCceecCCccccchHHHHHHHHHH
Confidence 46889999999996654443332 1 10 001134799999955 99999644444456666666663
Q ss_pred -HHHhccc-----CCceEEEEEEcccHHHHHHHHHhC------CCccceEEEecCCCCC
Q 012188 244 -KSVIEPN-----KVKSFHIVAHSLGCILALALAVKH------PGSVKSLTLLAPPYYP 290 (468)
Q Consensus 244 -~~l~~~l-----~~~~i~lvGhS~Gg~ial~~a~~~------p~~v~~lVl~~p~~~~ 290 (468)
..+.+.+ ...+++|.|-|+||..+-.+|.+- +-.++++++.+|...+
T Consensus 123 l~~f~~~fp~~~~k~~~~yi~GESYgG~yvP~la~~i~~~~~~~inlkGi~iGng~~dp 181 (421)
T d1wpxa1 123 LELFFDQFPEYVNKGQDFHIAGESYAGHYIPVFASEILSHKDRNFNLTSVLIGNGLTDP 181 (421)
T ss_dssp HHHHHHHCTHHHHTCCCEEEEEETTHHHHHHHHHHHHHHCSSCSSCCCEEEEESCCCCH
T ss_pred HHHHHHhChhhhccCCCcEEeeecccccccHHHHHHHHHccCCCcceeeeEecCCcccc
Confidence 2222322 335899999999998777776432 2357899999987643
|
| >d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.55 E-value=2.7e-09 Score=98.61 Aligned_cols=110 Identities=15% Similarity=0.149 Sum_probs=72.9
Q ss_pred ecCCCCeEEEEecCCCC--ccchhhhhhhccccCCCcceEEEECCCCCCCCCCCCC-CCCCHHHHHHHH---HHHHhcc-
Q 012188 177 WSSSSRDTLFVKTQGPS--AFWTETLFPNFSSASKSTYRLFAIDLLGFGRSPKPTD-SLYTVREHLDMI---EKSVIEP- 249 (468)
Q Consensus 177 ~~~~~p~vl~lHG~g~s--~~~~~~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~-~~~t~~~~~~di---~~~l~~~- 249 (468)
+.+++|+++++|||.++ ..|...+...+. ....++||++|+...... ... .........+.+ ...+++.
T Consensus 66 f~~~~pt~iiiHG~~~~~~~~~~~~~~~a~l--~~~d~NVi~VDW~~~a~~--~Y~~a~~n~~~Vg~~ia~~i~~l~~~~ 141 (338)
T d1bu8a2 66 FQLDRKTRFIVHGFIDKGEDGWLLDMCKKMF--QVEKVNCICVDWRRGSRT--EYTQASYNTRVVGAEIAFLVQVLSTEM 141 (338)
T ss_dssp CCTTSEEEEEECCSCCTTCTTHHHHHHHHHH--TTCCEEEEEEECHHHHSS--CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCceEEEeCcccCCCCcccHHHHHHHHH--hcCCceEEEEechhhccc--chHHHHHhHHHHHHHHHHHHHHHHHhc
Confidence 36778999999998763 335554544433 246799999999763211 100 001222222233 1233333
Q ss_pred -cCCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCC
Q 012188 250 -NKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 250 -l~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~ 290 (468)
+..+++++||||+|+.+|-.++.+.+.++.+++.++|....
T Consensus 142 g~~~~~vhlIGhSLGAhiaG~ag~~l~~kigrItgLDPA~P~ 183 (338)
T d1bu8a2 142 GYSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAEPC 183 (338)
T ss_dssp CCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCTT
T ss_pred CCCcceeEEEeccHHHHHHHHHHHhhccccccccccccCcCc
Confidence 34579999999999999999999999899999999987544
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Probab=98.52 E-value=3.8e-07 Score=84.06 Aligned_cols=44 Identities=7% Similarity=0.107 Sum_probs=37.1
Q ss_pred CCcEEEEeeCCCCccChhhHHHHHHhCC------CCeEEEecCCCccccc
Q 012188 397 KCDVNVFHGEDDELIPVECSYNVQRKIP------RARVKVIEKKDHITIV 440 (468)
Q Consensus 397 ~~PvLii~G~~D~~vp~~~~~~l~~~~p------~~~l~~i~~~gH~~~~ 440 (468)
+.|++++||.+|..||+..++.+.+.+. +++++..+++||....
T Consensus 90 ~~pvll~hG~~D~~Vpp~~s~~l~~~l~~~~~~~~v~yv~~~gagH~fpT 139 (318)
T d2d81a1 90 QRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPT 139 (318)
T ss_dssp GCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEE
T ss_pred CCCEEEEecCCCCCcCHHHHHHHHHHHHcCcCCCceEEEEeCCCCCCCCC
Confidence 6799999999999999999988888663 2467788999998764
|
| >d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical esterase YJL068C domain: Hypothetical esterase YJL068C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.51 E-value=8.6e-07 Score=81.24 Aligned_cols=38 Identities=29% Similarity=0.302 Sum_probs=32.8
Q ss_pred ceEEEEEEcccHHHHHHHHHh--CCCccceEEEecCCCCC
Q 012188 253 KSFHIVAHSLGCILALALAVK--HPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 253 ~~i~lvGhS~Gg~ial~~a~~--~p~~v~~lVl~~p~~~~ 290 (468)
++..|.||||||+-|+.+|.+ +|+++.++...++...+
T Consensus 153 ~~~~I~G~SmGG~gAl~~al~~~~p~~f~~~~s~s~~~~~ 192 (299)
T d1pv1a_ 153 DNVAITGHSMGGYGAICGYLKGYSGKRYKSCSAFAPIVNP 192 (299)
T ss_dssp SSEEEEEETHHHHHHHHHHHHTGGGTCCSEEEEESCCCCS
T ss_pred cceEEEeecccHHHHHHHHHHhcCCCceEEEeeccCcCCc
Confidence 468999999999999999986 48999999999887644
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Probab=98.44 E-value=2e-06 Score=77.39 Aligned_cols=40 Identities=13% Similarity=0.081 Sum_probs=35.6
Q ss_pred CCceEEEEEEcccHHHHHHHHHhCCCccceEEEecCCCCC
Q 012188 251 KVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 251 ~~~~i~lvGhS~Gg~ial~~a~~~p~~v~~lVl~~p~~~~ 290 (468)
+.+++++.|+||||..++.+|.++|+++.+++.+++....
T Consensus 142 d~~~~~i~G~S~GG~~a~~~a~~~pd~f~a~~~~sg~~~~ 181 (273)
T d1wb4a1 142 SRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDYWY 181 (273)
T ss_dssp TGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCCCB
T ss_pred CccceEEEeeCCcchhhhhhhhcCCCcceEEEEeCccccc
Confidence 3367999999999999999999999999999999986543
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Probab=98.42 E-value=3.3e-07 Score=82.52 Aligned_cols=56 Identities=11% Similarity=0.052 Sum_probs=37.3
Q ss_pred CCcEEEEeeCC--------CCccChhhHHHHHHhC----CCCeEEEecCCCccccccCcHHHHHHHHHHHH
Q 012188 397 KCDVNVFHGED--------DELIPVECSYNVQRKI----PRARVKVIEKKDHITIVVGRQKTFARELEEIW 455 (468)
Q Consensus 397 ~~PvLii~G~~--------D~~vp~~~~~~l~~~~----p~~~l~~i~~~gH~~~~~e~p~~~~~~i~~fl 455 (468)
..|+++.+|+. |..++.+..+.+.+.+ -+.++.++||++|... .+..+.+.|++..
T Consensus 196 ~~~~~~~~g~~~~~~~~~~d~~~~~~~~~~l~~~L~~~g~~~~~~~~pG~~Hg~~---~~~s~~~~l~~l~ 263 (265)
T d2gzsa1 196 TKHLAIMEGSATQGDNRETHAVGVLSKIHTTLTILKDKGVNAVFWDFPNLGHGPM---FNASFRQALLDIS 263 (265)
T ss_dssp TCEEEEEECCC-----------CHHHHHHHHHHHHHHTTCCEEEEECTTCCHHHH---HHHHHHHHHHHHT
T ss_pred CCcEEEEcCCcccccccccccchhHHHHHHHHHHHHHCCCCEEEEEcCCCCcchH---HHHHHHHHHHHHh
Confidence 56777777766 5556777777776655 3568999999999754 3556666666543
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.11 E-value=5.6e-07 Score=84.85 Aligned_cols=99 Identities=16% Similarity=0.157 Sum_probs=67.3
Q ss_pred CCeEEEEecCCCC--------ccchh---hhhhhccccCCCcceEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHh--
Q 012188 181 SRDTLFVKTQGPS--------AFWTE---TLFPNFSSASKSTYRLFAIDLLGFGRSPKPTDSLYTVREHLDMIEKSVI-- 247 (468)
Q Consensus 181 ~p~vl~lHG~g~s--------~~~~~---~~~~~L~~~~~~gy~Via~D~~G~G~S~~~~~~~~t~~~~~~di~~~l~-- 247 (468)
+-||||+||+.+- .+|.. .+-+.|. ++|++|++.....+ .+.++-++++...+.
T Consensus 7 ~yPIVLvHGl~Gf~~~~l~~~~YW~G~~~~I~~~L~---~~G~~V~~~~V~p~----------~S~~~RA~eL~~~I~~~ 73 (388)
T d1ku0a_ 7 DAPIVLLHGFTGWGREEMLGFKYWGGVRGDIEQWLN---DNGYRTYTLAVGPL----------SSNWDRACEAYAQLVGG 73 (388)
T ss_dssp CCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHH---HTTCCEEECCCCSS----------BCHHHHHHHHHHHHHCE
T ss_pred CCCEEEeCCcccCCccccCcccccCCchhhhHHHHH---hCCCEEEEeccCCc----------cCHHHHHHHHHHHHhhh
Confidence 4589999996441 23432 2445554 58999999988653 356666666633332
Q ss_pred -cccCC-------------------------ceEEEEEEcccHHHHHHHHHhCC-------------------------C
Q 012188 248 -EPNKV-------------------------KSFHIVAHSLGCILALALAVKHP-------------------------G 276 (468)
Q Consensus 248 -~~l~~-------------------------~~i~lvGhS~Gg~ial~~a~~~p-------------------------~ 276 (468)
...|. +|++||||||||..+-.++...| +
T Consensus 74 ~~d~G~~hs~~~~~~~~~r~y~g~~~~~~~~~kVnLIgHS~GGld~Ryl~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~ 153 (388)
T d1ku0a_ 74 TVDYGAAHAAKHGHARFGRTYPGLLPELKRGGRVHIIAHSQGGQTARMLVSLLENGSQEEREYAKEHNVSLSPLFEGGHR 153 (388)
T ss_dssp EEECCHHHHHHHTSCSEEEEECCSCGGGGGTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCC
T ss_pred hhhhhHhHHhhhcccccCccCcccccccccCCceeEeecccccHHHHHHHHHhccccccccccccccccccccccccCCc
Confidence 12222 48999999999999998887543 3
Q ss_pred ccceEEEecCCCCCCC
Q 012188 277 SVKSLTLLAPPYYPVP 292 (468)
Q Consensus 277 ~v~~lVl~~p~~~~~~ 292 (468)
.|++++-+++|....+
T Consensus 154 ~V~SvTTIsTPH~GS~ 169 (388)
T d1ku0a_ 154 FVLSVTTIATPHDGTT 169 (388)
T ss_dssp CEEEEEEESCCTTCCG
T ss_pred ceEEEEeccCCCCCcc
Confidence 6999999998876533
|
| >d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Thermophilic para-nitrobenzyl esterase (PNB esterase) species: Bacillus subtilis [TaxId: 1423]
Probab=97.28 E-value=0.00028 Score=68.76 Aligned_cols=118 Identities=10% Similarity=0.097 Sum_probs=74.3
Q ss_pred CceeEEEecC-----CCCeEEEEecCCC---CccchhhhhhhccccCCCcceEEEECCC----CCCCCC---CCCCCCCC
Q 012188 170 DCKFCTCWSS-----SSRDTLFVKTQGP---SAFWTETLFPNFSSASKSTYRLFAIDLL----GFGRSP---KPTDSLYT 234 (468)
Q Consensus 170 ~~~~~~~~~~-----~~p~vl~lHG~g~---s~~~~~~~~~~L~~~~~~gy~Via~D~~----G~G~S~---~~~~~~~t 234 (468)
+|++.-.|.+ +.|++|+|||++. +......-...+. .+++.-|+.+++| |+=... ......+-
T Consensus 80 DCL~lni~~P~~~~~~lPV~v~ihGG~~~~g~~~~~~~~~~~~~--~~~~vVvV~~nYRlg~~GFl~~~~~~~~~~gN~G 157 (483)
T d1qe3a_ 80 DCLYVNVFAPDTPSQNLPVMVWIHGGAFYLGAGSEPLYDGSKLA--AQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLG 157 (483)
T ss_dssp CCCEEEEEEECSSCCSEEEEEEECCSTTTSCCTTSGGGCCHHHH--HHHTCEEEEECCCCHHHHSCCCTTTCTTSCSCHH
T ss_pred cCCEEEEEECCCCCCCCceEEEEeecccccCCcccccccccccc--ccCceEEEeecccccchhhccccccccccccccc
Confidence 5666666632 3489999999864 2222111112222 1257999999998 332111 11224567
Q ss_pred HHHHHHHHHHHH---hcccCC--ceEEEEEEcccHHHHHHHHHhC--CCccceEEEecCCCCC
Q 012188 235 VREHLDMIEKSV---IEPNKV--KSFHIVAHSLGCILALALAVKH--PGSVKSLTLLAPPYYP 290 (468)
Q Consensus 235 ~~~~~~di~~~l---~~~l~~--~~i~lvGhS~Gg~ial~~a~~~--p~~v~~lVl~~p~~~~ 290 (468)
+.|....+ +.+ +..+|. ++|.|+|||.||..+..+.... ...+.++|+.++....
T Consensus 158 l~Dq~~AL-~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~~~ 219 (483)
T d1qe3a_ 158 LLDQAAAL-KWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASRT 219 (483)
T ss_dssp HHHHHHHH-HHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCCCC
T ss_pred cHHHHHHH-HHHHHHHHHcCCCcccceeeccccccchhhhhhcccccCCcceeeccccCCccc
Confidence 88887777 455 445665 4799999999999887766532 2589999999976543
|
| >d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Mammalian carboxylesterase (liver carboxylesterase I) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.11 E-value=0.00053 Score=67.52 Aligned_cols=115 Identities=11% Similarity=0.091 Sum_probs=72.8
Q ss_pred CceeEEEecCC-------CCeEEEEecCCC---CccchhhhhhhccccCCCcceEEEECCC----CCCCCCC-CCCCCCC
Q 012188 170 DCKFCTCWSSS-------SRDTLFVKTQGP---SAFWTETLFPNFSSASKSTYRLFAIDLL----GFGRSPK-PTDSLYT 234 (468)
Q Consensus 170 ~~~~~~~~~~~-------~p~vl~lHG~g~---s~~~~~~~~~~L~~~~~~gy~Via~D~~----G~G~S~~-~~~~~~t 234 (468)
+|++.-.|.+. .|++|+|||++. +..++.. ...++ +++.-|+.+++| |+-.+.. .....+-
T Consensus 95 DCL~LnI~~P~~~~~~~~lPV~v~ihGG~~~~gs~~~~~~-~~~~~---~~~vIvVt~nYRLg~~GFl~~~~~~~~gN~G 170 (532)
T d2h7ca1 95 DCLYLNIYTPADLTKKNRLPVMVWIHGGGLMVGAASTYDG-LALAA---HENVVVVTIQYRLGIWGFFSTGDEHSRGNWG 170 (532)
T ss_dssp CCCEEEEEECSCTTSCCCEEEEEEECCSTTTSCCSTTSCC-HHHHH---HHTCEEEEECCCCHHHHHCCCSSTTCCCCHH
T ss_pred cCCEEEEEECCCCCCCCCcEEEEEEeCCcccccccccCCc-hhhhh---cCceEEEEEeeccCCCccccccccccccccc
Confidence 45666666331 389999999765 2222211 11112 378999999998 3322221 1124567
Q ss_pred HHHHHHHHHHHHh---cccCC--ceEEEEEEcccHHHHHHHHHh--CCCccceEEEecCCCC
Q 012188 235 VREHLDMIEKSVI---EPNKV--KSFHIVAHSLGCILALALAVK--HPGSVKSLTLLAPPYY 289 (468)
Q Consensus 235 ~~~~~~di~~~l~---~~l~~--~~i~lvGhS~Gg~ial~~a~~--~p~~v~~lVl~~p~~~ 289 (468)
+.|....+ +.+. ..+|. ++|.|+|+|.||..+..+... ....+.++|+.++...
T Consensus 171 l~Dq~~AL-~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG~~~ 231 (532)
T d2h7ca1 171 HLDQVAAL-RWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAL 231 (532)
T ss_dssp HHHHHHHH-HHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred cHHHHHHH-HHHHHHHHHhcCCcceeeeeccccccchHHHHHhhhhccCcchhhhhhccccc
Confidence 77877777 4554 45665 479999999999877776553 2357999999996543
|
| >d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.05 E-value=0.0005 Score=67.92 Aligned_cols=117 Identities=13% Similarity=0.082 Sum_probs=73.5
Q ss_pred CceeEEEecC------CCCeEEEEecCCC---CccchhhhhhhccccCCCcceEEEECCC----CCCCCCC--CCCCCCC
Q 012188 170 DCKFCTCWSS------SSRDTLFVKTQGP---SAFWTETLFPNFSSASKSTYRLFAIDLL----GFGRSPK--PTDSLYT 234 (468)
Q Consensus 170 ~~~~~~~~~~------~~p~vl~lHG~g~---s~~~~~~~~~~L~~~~~~gy~Via~D~~----G~G~S~~--~~~~~~t 234 (468)
+|++.--|.+ +.|++|+|||++. +......-...+. .+++.-|+.+++| |+-.+.. ...+.+-
T Consensus 95 DCL~LnI~~P~~~~~~~lPV~v~ihGG~~~~gs~~~~~~~~~~~~--~~~~vvvVt~nYRlg~~Gfl~~~~~~~~~gN~G 172 (542)
T d2ha2a1 95 DCLYLNVWTPYPRPASPTPVLIWIYGGGFYSGAASLDVYDGRFLA--QVEGAVLVSMNYRVGTFGFLALPGSREAPGNVG 172 (542)
T ss_dssp CCCEEEEEEESSCCSSCEEEEEEECCSTTTCCCTTSGGGCTHHHH--HHHCCEEEEECCCCHHHHHCCCTTCSSCCSCHH
T ss_pred cCCEEEEEecCCCCCCCCcEEEEEEECccccccCcccccCchhhh--hhccceeEeeeeeccceeeecccccccCCCcCC
Confidence 5666666622 2389999999764 2221111111121 1368999999999 4432221 1223456
Q ss_pred HHHHHHHHHHHH---hcccCC--ceEEEEEEcccHHHHHHHHHhC--CCccceEEEecCCCC
Q 012188 235 VREHLDMIEKSV---IEPNKV--KSFHIVAHSLGCILALALAVKH--PGSVKSLTLLAPPYY 289 (468)
Q Consensus 235 ~~~~~~di~~~l---~~~l~~--~~i~lvGhS~Gg~ial~~a~~~--p~~v~~lVl~~p~~~ 289 (468)
+.|....+ +.+ +..+|. ++|.|+|||.||..+..+.... ...+.++|+.++...
T Consensus 173 l~Dq~~AL-~WV~~nI~~FGGDP~~VTi~G~SAGa~sv~~ll~sp~~~~LF~~aI~~SG~~~ 233 (542)
T d2ha2a1 173 LLDQRLAL-QWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTPN 233 (542)
T ss_dssp HHHHHHHH-HHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCSS
T ss_pred cccHHHHH-HHHHHHHHHhhcCccccccccccccccchhhhhhhhhhhHHhhhheeeccccC
Confidence 77777777 455 445665 4799999999998888766543 258999999987543
|
| >d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Candida cylindracea, cholesterol esterase [TaxId: 44322]
Probab=96.94 E-value=0.00056 Score=67.41 Aligned_cols=116 Identities=9% Similarity=0.028 Sum_probs=69.8
Q ss_pred CceeEEEecC-------CCCeEEEEecCCCC---cc-chh-hhh-hhccccCCCcceEEEECCCC----CCCCC---CCC
Q 012188 170 DCKFCTCWSS-------SSRDTLFVKTQGPS---AF-WTE-TLF-PNFSSASKSTYRLFAIDLLG----FGRSP---KPT 229 (468)
Q Consensus 170 ~~~~~~~~~~-------~~p~vl~lHG~g~s---~~-~~~-~~~-~~L~~~~~~gy~Via~D~~G----~G~S~---~~~ 229 (468)
+|++.-.|.+ +.|++|+|||++.. .. +.. .+. ..+ ..+++.-|+.+++|- +-..+ ...
T Consensus 96 DCL~LnI~~P~~~~~~~~~PVlv~ihGG~f~~g~~~~~~~~~~~~~~~--~~~~~vIvVt~nYRLg~~GFl~~~~~~~~~ 173 (534)
T d1llfa_ 96 DCLTINVVRPPGTKAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSV--LMGKPIIHVAVNYRVASWGFLAGDDIKAEG 173 (534)
T ss_dssp CCCEEEEEECTTCCTTCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHH--HTTCCCEEEEECCCCHHHHHCCSHHHHHHT
T ss_pred cCCEEEEEECCCCCCCCCCeEEEEECCCccccCCCCCCCchhccchhh--hccCCeEEEEeecCCCcccccCCccccccc
Confidence 5566666632 34799999998742 21 111 111 111 124789999999993 33221 111
Q ss_pred CCCCCHHHHHHHHHHHHh---cccCC--ceEEEEEEcccHHHHHHHHH-hC----C---CccceEEEecCCC
Q 012188 230 DSLYTVREHLDMIEKSVI---EPNKV--KSFHIVAHSLGCILALALAV-KH----P---GSVKSLTLLAPPY 288 (468)
Q Consensus 230 ~~~~t~~~~~~di~~~l~---~~l~~--~~i~lvGhS~Gg~ial~~a~-~~----p---~~v~~lVl~~p~~ 288 (468)
...+-+.|....+ +.+. ..+|. ++|.|+|||.||..+..... .. | ..+.++|+.++..
T Consensus 174 ~gN~Gl~Dq~~AL-~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~~~~~~~sp~s~gLF~raI~qSGs~ 244 (534)
T d1llfa_ 174 SGNAGLKDQRLGM-QWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAM 244 (534)
T ss_dssp CTTHHHHHHHHHH-HHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCCS
T ss_pred ccccchhHHHHHH-HHHHhhhhhhccCCcceeeeeecchHHHHHHHHhccccccccchhhhhhhhhhccCcc
Confidence 1345677777766 3554 45665 48999999999986654433 21 1 2599999999754
|
| >d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Pacific electric ray (Torpedo californica) [TaxId: 7787]
Probab=96.94 E-value=0.00064 Score=66.93 Aligned_cols=117 Identities=13% Similarity=0.064 Sum_probs=72.7
Q ss_pred CceeEEEecC-----CCCeEEEEecCCC---CccchhhhhhhccccCCCcceEEEECCC----CCCCCC--CCCCCCCCH
Q 012188 170 DCKFCTCWSS-----SSRDTLFVKTQGP---SAFWTETLFPNFSSASKSTYRLFAIDLL----GFGRSP--KPTDSLYTV 235 (468)
Q Consensus 170 ~~~~~~~~~~-----~~p~vl~lHG~g~---s~~~~~~~~~~L~~~~~~gy~Via~D~~----G~G~S~--~~~~~~~t~ 235 (468)
+|++.-.|.+ +.|++|+|||++. +......-...+. .+++.-|+.+++| |+-.++ ......+-+
T Consensus 90 DCL~LnI~~P~~~~~~lPV~v~ihGG~~~~g~~~~~~~~~~~~~--~~~~vvvVt~nYRlg~~GFl~~~~~~~~~gN~Gl 167 (532)
T d1ea5a_ 90 DCLYLNIWVPSPRPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLA--YTEEVVLVSLSYRVGAFGFLALHGSQEAPGNVGL 167 (532)
T ss_dssp CCCEEEEEECSSCCSSEEEEEEECCSTTTCCCTTCGGGCTHHHH--HHHTCEEEECCCCCHHHHHCCCTTCSSSCSCHHH
T ss_pred cCCEEEEEeCCCCCCCCcEEEEEEcCCcccccCCccccCcchhh--cccCccEEEEeeccccccccccccccCCCCcccc
Confidence 5666666633 3489999999764 1111111111111 1368999999988 333222 112234677
Q ss_pred HHHHHHHHHHHh---cccCC--ceEEEEEEcccHHHHHHHHHhC--CCccceEEEecCCCC
Q 012188 236 REHLDMIEKSVI---EPNKV--KSFHIVAHSLGCILALALAVKH--PGSVKSLTLLAPPYY 289 (468)
Q Consensus 236 ~~~~~di~~~l~---~~l~~--~~i~lvGhS~Gg~ial~~a~~~--p~~v~~lVl~~p~~~ 289 (468)
.|....+ +.+. ..+|. ++|.|+|+|.||..+..+.... ...+.++|+.++...
T Consensus 168 ~Dq~~AL-~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lF~~aI~~Sg~~~ 227 (532)
T d1ea5a_ 168 LDQRMAL-QWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPN 227 (532)
T ss_dssp HHHHHHH-HHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTT
T ss_pred hhHHHHH-HHHHHHHHhhcCCccceEeeeecccccchhhhccCccchhhhhhheeeccccc
Confidence 7877777 4554 45665 4799999999998777665532 257999999986654
|
| >d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Butyryl cholinesterase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.93 E-value=0.00072 Score=66.46 Aligned_cols=118 Identities=10% Similarity=0.058 Sum_probs=72.5
Q ss_pred CceeEEEec-----CCCCeEEEEecCCCC---ccchhhhhhhccccCCCcceEEEECCCC----CCCC--CCCCCCCCCH
Q 012188 170 DCKFCTCWS-----SSSRDTLFVKTQGPS---AFWTETLFPNFSSASKSTYRLFAIDLLG----FGRS--PKPTDSLYTV 235 (468)
Q Consensus 170 ~~~~~~~~~-----~~~p~vl~lHG~g~s---~~~~~~~~~~L~~~~~~gy~Via~D~~G----~G~S--~~~~~~~~t~ 235 (468)
+|++.--|. .+.|++|+|||++.. ......-...+. .+.+.-|+.+++|= +-.+ .......+-+
T Consensus 88 DCL~lnI~~P~~~~~~~PV~v~ihGG~~~~gs~~~~~~~~~~~~--~~~~vVvVt~nYRlg~~Gfl~~~~~~~~~gN~Gl 165 (526)
T d1p0ia_ 88 DCLYLNVWIPAPKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLA--RVERVIVVSMNYRVGALGFLALPGNPEAPGNMGL 165 (526)
T ss_dssp CCCEEEEEEESSCCSSEEEEEEECCSTTTSCCTTCGGGCTHHHH--HHHCCEEEEECCCCHHHHHCCCTTCTTSCSCHHH
T ss_pred cCCEEEEEeCCCCCCCCceEEEEECCCcccccCcccccCccccc--cccceeEEecccccccccccCCCCcccccccccc
Confidence 566666663 234899999998642 211110111121 12689999999883 3222 1122245677
Q ss_pred HHHHHHHHHHH---hcccCC--ceEEEEEEcccHHHHHHHHHh--CCCccceEEEecCCCCC
Q 012188 236 REHLDMIEKSV---IEPNKV--KSFHIVAHSLGCILALALAVK--HPGSVKSLTLLAPPYYP 290 (468)
Q Consensus 236 ~~~~~di~~~l---~~~l~~--~~i~lvGhS~Gg~ial~~a~~--~p~~v~~lVl~~p~~~~ 290 (468)
.|....+ +.+ ++.+|. ++|.|+|+|.||..+..+... ....+.++|+.++....
T Consensus 166 ~Dq~~AL-~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lf~~aI~~Sg~~~~ 226 (526)
T d1p0ia_ 166 FDQQLAL-QWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSFNA 226 (526)
T ss_dssp HHHHHHH-HHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCTTS
T ss_pred cchhhhh-hhHHHHHHHhhcCchheeehhhccccceeeccccCCcchhhhhhhhcccccccC
Confidence 7877777 455 445665 489999999999987655442 23578999998876543
|
| >d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Esterase EstA species: Aspergillus niger [TaxId: 5061]
Probab=96.93 E-value=0.0015 Score=63.96 Aligned_cols=115 Identities=15% Similarity=0.089 Sum_probs=70.5
Q ss_pred CceeEEEecC-------CCCeEEEEecCCC---Cc-cch-hhhhhhccccCCCcceEEEECCCC----CCCCC---CCCC
Q 012188 170 DCKFCTCWSS-------SSRDTLFVKTQGP---SA-FWT-ETLFPNFSSASKSTYRLFAIDLLG----FGRSP---KPTD 230 (468)
Q Consensus 170 ~~~~~~~~~~-------~~p~vl~lHG~g~---s~-~~~-~~~~~~L~~~~~~gy~Via~D~~G----~G~S~---~~~~ 230 (468)
+|++.--|.+ +.|++|+|||++. +. .+. .... ++ .+++.-|+.+++|= +=.+. .+..
T Consensus 79 DCL~LnI~~P~~~~~~~~~PV~v~ihGG~~~~G~~~~~~~~~~~--~~--~~~~vVvVt~nYRlg~~GFl~~~~~~~~~~ 154 (517)
T d1ukca_ 79 DCLFINVFKPSTATSQSKLPVWLFIQGGGYAENSNANYNGTQVI--QA--SDDVIVFVTFNYRVGALGFLASEKVRQNGD 154 (517)
T ss_dssp CCCEEEEEEETTCCTTCCEEEEEEECCSTTTSCCSCSCCCHHHH--HH--TTSCCEEEEECCCCHHHHHCCCHHHHHSSC
T ss_pred cCCEEEEEeCCCCCCCCCceEEEEEcCCccccCCCccccchhhh--hh--hccccceEEEEecccceeecCccccccccc
Confidence 4566666632 1289999999764 22 221 1111 11 23678899999983 32221 1112
Q ss_pred CCCCHHHHHHHHHHHHh---cccCC--ceEEEEEEcccHHHHHHHHHh----CCCccceEEEecCCCC
Q 012188 231 SLYTVREHLDMIEKSVI---EPNKV--KSFHIVAHSLGCILALALAVK----HPGSVKSLTLLAPPYY 289 (468)
Q Consensus 231 ~~~t~~~~~~di~~~l~---~~l~~--~~i~lvGhS~Gg~ial~~a~~----~p~~v~~lVl~~p~~~ 289 (468)
..+-+.|....+ +.+. ..+|. ++|.|+|||.||..+...... ....+.++|+.++...
T Consensus 155 ~N~Gl~Dq~~AL-~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~s~~~~~~gLF~raI~qSg~~~ 221 (517)
T d1ukca_ 155 LNAGLLDQRKAL-RWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWP 221 (517)
T ss_dssp TTHHHHHHHHHH-HHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCC
T ss_pred cchhHHHHHHHH-HHHHHHHHhhcCCcccccccccccchhhHHHHHhccccccccccceeeecccccc
Confidence 346677877777 4554 45665 479999999999877654432 2348999999997654
|
| >d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]
Probab=96.72 E-value=0.001 Score=65.67 Aligned_cols=116 Identities=9% Similarity=0.055 Sum_probs=71.6
Q ss_pred CceeEEEecC-------CCCeEEEEecCCCCc---c-c--hhhhhhhccccCCCcceEEEECCC----CCCCCCC---CC
Q 012188 170 DCKFCTCWSS-------SSRDTLFVKTQGPSA---F-W--TETLFPNFSSASKSTYRLFAIDLL----GFGRSPK---PT 229 (468)
Q Consensus 170 ~~~~~~~~~~-------~~p~vl~lHG~g~s~---~-~--~~~~~~~L~~~~~~gy~Via~D~~----G~G~S~~---~~ 229 (468)
+|++.-.|.+ ..|++|+|||++... . + .......++ .+++.-|+.+++| |+-.+.. ..
T Consensus 104 DCL~LnI~~P~~~~~~~~lPV~V~ihGG~f~~G~~~~~~~~~~~~~~~~--~~~~vIvVt~nYRlg~~Gfl~~~~~~~~~ 181 (544)
T d1thga_ 104 DCLYLNVFRPAGTKPDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESIN--MGQPVVFVSINYRTGPFGFLGGDAITAEG 181 (544)
T ss_dssp CCCEEEEEEETTCCTTCCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHH--TTCCCEEEEECCCCHHHHHCCSHHHHHHT
T ss_pred cCCEEEEEECCCCCCCCCCCEEEEeccCCCccCCCccCCcchhhhhhhh--ccCCeEEEecccccccccccCCchhhccc
Confidence 4566655522 238999999987522 1 1 111112222 3478999999998 3332211 11
Q ss_pred CCCCCHHHHHHHHHHHHh---cccCC--ceEEEEEEcccHHHHHHHHHhC--------CCccceEEEecCCC
Q 012188 230 DSLYTVREHLDMIEKSVI---EPNKV--KSFHIVAHSLGCILALALAVKH--------PGSVKSLTLLAPPY 288 (468)
Q Consensus 230 ~~~~t~~~~~~di~~~l~---~~l~~--~~i~lvGhS~Gg~ial~~a~~~--------p~~v~~lVl~~p~~ 288 (468)
...+-+.|....+ +.+. ..+|. ++|.|+|||.||..+..+.... ...+.++|+.++..
T Consensus 182 ~gN~Gl~Dq~~AL-~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~sp~~~~~~~s~gLF~raI~qSG~~ 252 (544)
T d1thga_ 182 NTNAGLHDQRKGL-EWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp CTTHHHHHHHHHH-HHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCC
T ss_pred cccHHHHHhhhhh-hhhhhhhcccccCCCceEeeeeccchHHHHHHHhCcCCCcccchhhhhcccccccccc
Confidence 1346677777777 4554 45665 4899999999998766655431 24799999999754
|
| >d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.59 E-value=0.0013 Score=65.31 Aligned_cols=106 Identities=11% Similarity=-0.024 Sum_probs=65.1
Q ss_pred CCeEEEEecCCC---CccchhhhhhhccccCCCcceEEEECCCC----CCC------C--CCCCCCCCCHHHHHHHHHHH
Q 012188 181 SRDTLFVKTQGP---SAFWTETLFPNFSSASKSTYRLFAIDLLG----FGR------S--PKPTDSLYTVREHLDMIEKS 245 (468)
Q Consensus 181 ~p~vl~lHG~g~---s~~~~~~~~~~L~~~~~~gy~Via~D~~G----~G~------S--~~~~~~~~t~~~~~~di~~~ 245 (468)
.|++|+|||++. +......-...|+ .+.+.-|+.+++|= +=. + .......+-+.|....+ +.
T Consensus 139 lPV~V~ihGG~f~~Gs~~~~~~~~~~l~--~~~~vVvVtinYRlg~fGFl~~~~~~~~~~~~~~~gN~Gl~Dq~~AL-~W 215 (571)
T d1dx4a_ 139 LPILIWIYGGGFMTGSATLDIYNADIMA--AVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAI-RW 215 (571)
T ss_dssp EEEEEEECCSTTTCCCTTCGGGCCHHHH--HHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHH-HH
T ss_pred CeEEEEEeCCCccCCCCcccccchhhhh--hcCCeeEEeecceeccccccccccccccccccCCCCcccchHHHHHH-HH
Confidence 389999999864 1111100112222 02457888999882 211 1 11112456788888887 45
Q ss_pred Hhc---ccCC--ceEEEEEEcccHHHHHHHHHhC--CCccceEEEecCCCC
Q 012188 246 VIE---PNKV--KSFHIVAHSLGCILALALAVKH--PGSVKSLTLLAPPYY 289 (468)
Q Consensus 246 l~~---~l~~--~~i~lvGhS~Gg~ial~~a~~~--p~~v~~lVl~~p~~~ 289 (468)
+.+ .+|. ++|.|+|||.||..+..+.... ...+.++|+.++...
T Consensus 216 V~~nI~~FGGDP~~VTl~G~SAGa~sv~~ll~sp~~~~lf~~aI~~Sg~~~ 266 (571)
T d1dx4a_ 216 LKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTMN 266 (571)
T ss_dssp HHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCTT
T ss_pred HHHhhhhhccCCCceEeccccCccceeeeeeccccccccccccceeccccc
Confidence 544 4564 4899999999999887655432 357999999887554
|
| >d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Bile-salt activated lipase (cholesterol esterase) species: Cow (Bos taurus) [TaxId: 9913]
Probab=96.37 E-value=0.0031 Score=62.51 Aligned_cols=116 Identities=12% Similarity=0.146 Sum_probs=69.9
Q ss_pred CceeEEEecC--------CCCeEEEEecCCC---Cccc---h-hhhh--hhccccCCCcceEEEECCC----CCCCCCCC
Q 012188 170 DCKFCTCWSS--------SSRDTLFVKTQGP---SAFW---T-ETLF--PNFSSASKSTYRLFAIDLL----GFGRSPKP 228 (468)
Q Consensus 170 ~~~~~~~~~~--------~~p~vl~lHG~g~---s~~~---~-~~~~--~~L~~~~~~gy~Via~D~~----G~G~S~~~ 228 (468)
+|++.-.|.+ +.|++|+|||++. +... . ..++ ..++ .+.+.-|+.+++| |+-.+...
T Consensus 79 DCL~LNI~~P~~~~~~~~~lPV~V~iHGG~f~~Gs~~~~~~~~~~~~dg~~la--~~~~vIvVt~nYRlg~~GFl~~~~~ 156 (579)
T d2bcea_ 79 DCLYLNIWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIA--TRGNVIVVTFNYRVGPLGFLSTGDS 156 (579)
T ss_dssp CCCEEEEEEEECSSSCCCSEEEEEECCCCSEEEC-------CTTGGGCCHHHH--HHHTCEEEEECCCCHHHHHCCCSST
T ss_pred cCCEEEEEECCCCCCCCCCCcEEEEECCCcccCCCCCCcccCCccccchhhhh--ccCCEEEEeeccccccccccccccc
Confidence 5666655521 2388999999764 1110 0 0011 1122 1246889999998 33222111
Q ss_pred -CCCCCCHHHHHHHHHHHHh---cccCC--ceEEEEEEcccHHHHHHHHHh--CCCccceEEEecCCC
Q 012188 229 -TDSLYTVREHLDMIEKSVI---EPNKV--KSFHIVAHSLGCILALALAVK--HPGSVKSLTLLAPPY 288 (468)
Q Consensus 229 -~~~~~t~~~~~~di~~~l~---~~l~~--~~i~lvGhS~Gg~ial~~a~~--~p~~v~~lVl~~p~~ 288 (468)
....+-+.|....+ +.+. ..+|. ++|.|+|||.||..+..+... ....++++|+.++..
T Consensus 157 ~~~gN~Gl~Dq~~AL-~WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~ 223 (579)
T d2bcea_ 157 NLPGNYGLWDQHMAI-AWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGVG 223 (579)
T ss_dssp TCCCCHHHHHHHHHH-HHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCCT
T ss_pred CCCccchhhHHHHHH-HHHhhhhhhhccCcCceEeeecccccchhhhhhhhhcccCccccceeccCCc
Confidence 11456788888777 4554 45665 479999999999877765543 346899999999654
|
| >d1tiaa_ c.69.1.17 (A:) Triacylglycerol lipase {Penicillium camembertii [TaxId: 5075]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Penicillium camembertii [TaxId: 5075]
Probab=93.98 E-value=0.038 Score=48.50 Aligned_cols=30 Identities=33% Similarity=0.420 Sum_probs=23.6
Q ss_pred HHHhcccCCceEEEEEEcccHHHHHHHHHh
Q 012188 244 KSVIEPNKVKSFHIVAHSLGCILALALAVK 273 (468)
Q Consensus 244 ~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~ 273 (468)
..+++..+..++++.|||+||.+|..++..
T Consensus 128 ~~~~~~~~~~~i~iTGHSLGGAlA~L~a~~ 157 (271)
T d1tiaa_ 128 KEVVAQNPNYELVVVGHSLGAAVATLAATD 157 (271)
T ss_pred HHHHHhCCCceEEEeccchHHHHHHHHHHH
Confidence 344455555789999999999999988765
|
| >d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus [TaxId: 4844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizopus niveus [TaxId: 4844]
Probab=93.89 E-value=0.028 Score=49.25 Aligned_cols=29 Identities=21% Similarity=0.264 Sum_probs=23.0
Q ss_pred HHhcccCCceEEEEEEcccHHHHHHHHHh
Q 012188 245 SVIEPNKVKSFHIVAHSLGCILALALAVK 273 (468)
Q Consensus 245 ~l~~~l~~~~i~lvGhS~Gg~ial~~a~~ 273 (468)
.+++..+..++++.|||+||.+|..+|..
T Consensus 125 ~~~~~~~~~~i~vtGHSLGGAlA~L~a~~ 153 (265)
T d1lgya_ 125 EQLTAHPTYKVIVTGHSLGGAQALLAGMD 153 (265)
T ss_dssp HHHHHCTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHhhCCCceEEEEecccchHHHHHHHHH
Confidence 44455566799999999999999888753
|
| >d3tgla_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizomucor miehei [TaxId: 4839]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizomucor miehei [TaxId: 4839]
Probab=93.87 E-value=0.028 Score=49.24 Aligned_cols=29 Identities=21% Similarity=0.228 Sum_probs=23.4
Q ss_pred HHhcccCCceEEEEEEcccHHHHHHHHHh
Q 012188 245 SVIEPNKVKSFHIVAHSLGCILALALAVK 273 (468)
Q Consensus 245 ~l~~~l~~~~i~lvGhS~Gg~ial~~a~~ 273 (468)
.++++.+..++++.|||+||.+|..+|..
T Consensus 124 ~~~~~~~~~~i~vtGHSLGGAlA~L~a~~ 152 (265)
T d3tgla_ 124 DQFKQYPSYKVAVTGHSLGGATVLLCALD 152 (265)
T ss_dssp HHHHHCTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHhCCCceEEEecccchHHHHHHHHHH
Confidence 44555666799999999999999987753
|
| >d1uwca_ c.69.1.17 (A:) Feruloyl esterase A {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Feruloyl esterase A species: Aspergillus niger [TaxId: 5061]
Probab=93.69 E-value=0.032 Score=48.71 Aligned_cols=30 Identities=23% Similarity=0.263 Sum_probs=23.8
Q ss_pred HHHhcccCCceEEEEEEcccHHHHHHHHHh
Q 012188 244 KSVIEPNKVKSFHIVAHSLGCILALALAVK 273 (468)
Q Consensus 244 ~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~ 273 (468)
..+++..+..++.+.|||+||.+|..++..
T Consensus 116 ~~~~~~~~~~~i~vTGHSLGGAlA~L~a~~ 145 (261)
T d1uwca_ 116 KQQASQYPDYALTVTGHSLGASMAALTAAQ 145 (261)
T ss_dssp HHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHhhCCCcceEEeccchhHHHHHHHHHH
Confidence 345555666799999999999999987754
|
| >d1tiba_ c.69.1.17 (A:) Triacylglycerol lipase {Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]
Probab=93.49 E-value=0.036 Score=48.63 Aligned_cols=31 Identities=19% Similarity=0.206 Sum_probs=24.1
Q ss_pred HHHhcccCCceEEEEEEcccHHHHHHHHHhC
Q 012188 244 KSVIEPNKVKSFHIVAHSLGCILALALAVKH 274 (468)
Q Consensus 244 ~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~ 274 (468)
..+++.....++++.|||+||.+|..++...
T Consensus 129 ~~~~~~~~~~~i~vtGHSLGGalA~l~a~~l 159 (269)
T d1tiba_ 129 EDAVREHPDYRVVFTGHSLGGALATVAGADL 159 (269)
T ss_dssp HHHHHHCTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHhCCCcceeeeccchHHHHHHHHHHHH
Confidence 3444555556999999999999999988743
|
| >d1cexa_ c.69.1.30 (A:) Cutinase {Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Cutinase species: Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]
Probab=86.36 E-value=1.1 Score=36.56 Aligned_cols=55 Identities=16% Similarity=0.083 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHhcccCCceEEEEEEcccHHHHHHHHHhCC----CccceEEEecCCCCC
Q 012188 235 VREHLDMIEKSVIEPNKVKSFHIVAHSLGCILALALAVKHP----GSVKSLTLLAPPYYP 290 (468)
Q Consensus 235 ~~~~~~di~~~l~~~l~~~~i~lvGhS~Gg~ial~~a~~~p----~~v~~lVl~~p~~~~ 290 (468)
..++...+ ....++-...+++|+|+|.|+.++-.++...+ ++|.++++++-|...
T Consensus 79 ~~~~~~~i-~~~a~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGDP~~~ 137 (197)
T d1cexa_ 79 IREMLGLF-QQANTKCPDATLIAGGYSQGAALAAASIEDLDSAIRDKIAGTVLFGYTKNL 137 (197)
T ss_dssp HHHHHHHH-HHHHHHCTTCEEEEEEETHHHHHHHHHHHHSCHHHHTTEEEEEEESCTTTT
T ss_pred HHHHHHHH-HHHHhhCCCCeEEEeeeccccHhhhcccccCChhhhhhEEEEEEEeCCCCC
Confidence 34455555 56666666689999999999999988887653 589999999865443
|