Citrus Sinensis ID: 012190
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 468 | 2.2.26 [Sep-21-2011] | |||||||
| Q9ZVN2 | 704 | Acyltransferase-like prot | yes | no | 0.865 | 0.575 | 0.608 | 1e-142 | |
| Q9LW26 | 701 | Acyltransferase-like prot | no | no | 0.673 | 0.449 | 0.457 | 9e-78 |
| >sp|Q9ZVN2|Y1457_ARATH Acyltransferase-like protein At1g54570, chloroplastic OS=Arabidopsis thaliana GN=At1g54570 PE=1 SV=1 | Back alignment and function desciption |
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Score = 506 bits (1304), Expect = e-142, Method: Compositional matrix adjust.
Identities = 252/414 (60%), Positives = 314/414 (75%), Gaps = 9/414 (2%)
Query: 56 VSPSFVINSQYKTSFRARAQSVGGGDSTVLSSGSIAVNGDPVSREKEKNGALIDVGNGTL 115
V P+ ++S + +F+ RAQ + G + S + NG +N + NG
Sbjct: 10 VLPNLRLSSNQRRNFKVRAQ-ISGENKKATSLEPVNNNGSVSLSTTVQNQKGANEVNG-- 66
Query: 116 KPRVEKKKLVKNVISEELEVLWDDGYGTDSVKDYLDAAKEIIKPDGGPPRWFCPVDCGRP 175
K K + ++S+E+E+LWDDGYG+ SVKDY AAKEI+K DGGPPRWF PVDCGRP
Sbjct: 67 -----KGKSKRKIVSDEIELLWDDGYGSKSVKDYFAAAKEILKADGGPPRWFSPVDCGRP 121
Query: 176 LKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTPFEGLVKFVEETVRRE 235
++ +PTLLFLPG+DG G+GL+ HHK LGKAF V CLHIPV DRTPFEGL+K VE+ +R+E
Sbjct: 122 VEDAPTLLFLPGMDGTGMGLVPHHKALGKAFHVSCLHIPVLDRTPFEGLLKVVEDVLRQE 181
Query: 236 HASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMP 295
A+ P KPIYLVGDSFGGCLALAVAARN ++DL+LIL NPATSF RS LQPL PIL+ +P
Sbjct: 182 QATRPNKPIYLVGDSFGGCLALAVAARNRSLDLVLILVNPATSFDRSPLQPLLPILEMVP 241
Query: 296 DELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLP-ALLPRLSVMSDIIPK 354
+ELH VPY LS++MGDPIKMA + I+N+LP +K+E+L L +LP LS + IIP+
Sbjct: 242 EELHFTVPYALSFIMGDPIKMATLGIDNQLPTGVKIEKLRQRLTKTMLPLLSELGGIIPR 301
Query: 355 DTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNF 414
+TLLWKLKLL+S AYANSR+HAV+AEVLVLASGKD MLPS++EAKRL+ L+NC VR F
Sbjct: 302 ETLLWKLKLLRSGCAYANSRIHAVQAEVLVLASGKDMMLPSQEEAKRLHGLLKNCSVRCF 361
Query: 415 KDNGHTLLLEEGISLLTIIKGTCKYRRSRKLDSVADFLPPSRQEFKYAFDQVVG 468
KDNGHTLLLE+ ISLLT+IKGT KYRRS + D V+DFLPPS+ E YA D+V+G
Sbjct: 362 KDNGHTLLLEDSISLLTVIKGTGKYRRSWRYDLVSDFLPPSKGELAYALDEVLG 415
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Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: - |
| >sp|Q9LW26|Y3684_ARATH Acyltransferase-like protein At3g26840, chloroplastic OS=Arabidopsis thaliana GN=At3g26840 PE=1 SV=1 | Back alignment and function description |
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Score = 291 bits (744), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 150/328 (45%), Positives = 205/328 (62%), Gaps = 13/328 (3%)
Query: 146 VKDYLDAAKEIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKA 205
+ D+L+ A+E + GGPPRWF P++CG SP LL+LPGIDG GLGLI HHK LG+
Sbjct: 87 LSDFLEEAREFVGDGGGPPRWFSPLECGAQATNSPLLLYLPGIDGTGLGLIRHHKKLGEI 146
Query: 206 FEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPT 265
F++ CLHIPV DRTP + LVK +EETV+ E+ P +PIYLVG+S G CLAL VAARNP
Sbjct: 147 FDIWCLHIPVSDRTPVKDLVKLIEETVKSENFRLPNRPIYLVGESIGACLALDVAARNPN 206
Query: 266 IDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVP--YLLSYVMGDPIKMAMVNIEN 323
IDL LIL NPAT +QPL +L +PD L + + + GDP+ + + N
Sbjct: 207 IDLSLILVNPATHVNNFMVQPLSGMLNVLPDGLPTLLEDIFDFGFKQGDPLTGMLDALSN 266
Query: 324 RLPPRIKLEQLSN-------NLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLH 376
++++ ++ A+ L +S + PKDTLLWKL++LK A A NS ++
Sbjct: 267 EF----SVQRMGGVGGGMLRDVLAVSANLPTLSRMFPKDTLLWKLEMLKYAIASVNSHIY 322
Query: 377 AVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGT 436
+V+AE L+L SG+D+ L E++ R + +L CIVR DNG LLE+G+ L TIIK T
Sbjct: 323 SVRAETLILLSGRDHWLLKEEDIDRYSRTLPKCIVRKLDDNGQFPLLEDGVDLATIIKCT 382
Query: 437 CKYRRSRKLDSVADFLPPSRQEFKYAFD 464
C YRR + D + D++ P+ E K D
Sbjct: 383 CFYRRGKSHDHITDYIMPTTFELKQQVD 410
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 468 | ||||||
| 255542416 | 723 | catalytic, putative [Ricinus communis] g | 0.895 | 0.579 | 0.706 | 1e-174 | |
| 224131374 | 724 | predicted protein [Populus trichocarpa] | 0.891 | 0.575 | 0.713 | 1e-169 | |
| 224125508 | 689 | predicted protein [Populus trichocarpa] | 0.854 | 0.580 | 0.703 | 1e-168 | |
| 359487917 | 711 | PREDICTED: acyltransferase-like protein | 0.893 | 0.587 | 0.720 | 1e-166 | |
| 224131378 | 680 | predicted protein [Populus trichocarpa] | 0.788 | 0.542 | 0.708 | 1e-153 | |
| 197312907 | 714 | esterase/lipase/thioesterase family prot | 0.895 | 0.586 | 0.647 | 1e-150 | |
| 224125526 | 638 | predicted protein [Populus trichocarpa] | 0.743 | 0.545 | 0.724 | 1e-149 | |
| 224125518 | 683 | predicted protein [Populus trichocarpa] | 0.839 | 0.575 | 0.604 | 1e-144 | |
| 297853422 | 703 | esterase/lipase/thioesterase family prot | 0.852 | 0.567 | 0.618 | 1e-142 | |
| 356504086 | 703 | PREDICTED: acyltransferase-like protein | 0.878 | 0.584 | 0.659 | 1e-142 |
| >gi|255542416|ref|XP_002512271.1| catalytic, putative [Ricinus communis] gi|223548232|gb|EEF49723.1| catalytic, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 616 bits (1588), Expect = e-174, Method: Compositional matrix adjust.
Identities = 308/436 (70%), Positives = 357/436 (81%), Gaps = 17/436 (3%)
Query: 48 MASVINFPVSPSFVINSQYKTSFRARAQSVGGGDSTVLSSGSIAVNGDPVSREKEKNGAL 107
MASV++F VSP +++NS+ K + R QS+ G DST+LSSGS+AVNG E NGAL
Sbjct: 1 MASVVSFRVSPYYLLNSEIKPRLQVRVQSLDGSDSTMLSSGSVAVNGTSFIGRIENNGAL 60
Query: 108 ---------------IDVGNGTLKPRVEKKKLVKNVISEELEVLWDDGYGTDSVKDYLDA 152
ID GNG LK RVEKK+ VKNV S++ EVLWDDGYGT + KDYL+
Sbjct: 61 NGGSTTTKKEEGRVLIDGGNGRLKSRVEKKQ-VKNV-SQDFEVLWDDGYGTKTAKDYLEG 118
Query: 153 AKEIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLH 212
AKE+ + D GPPRWF P++ G+PLK SPTLLFLPG+DG+GLGL LHHK LGK FEV CLH
Sbjct: 119 AKEMNRLDDGPPRWFSPIESGQPLKDSPTLLFLPGLDGVGLGLTLHHKALGKVFEVWCLH 178
Query: 213 IPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILIL 272
IPVY+RTPFEGLVKFVEETVR EHA P+KPIYLVGDSFGGCLALAVAARNP IDL++IL
Sbjct: 179 IPVYNRTPFEGLVKFVEETVRLEHALFPDKPIYLVGDSFGGCLALAVAARNPKIDLVVIL 238
Query: 273 SNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLE 332
+NPATSFGRSQLQPL P+L+A P+ LH AVPYLLS+VMG+P+KMAMV++E LPPR+K+E
Sbjct: 239 ANPATSFGRSQLQPLLPVLEAFPEGLHNAVPYLLSFVMGNPLKMAMVDVEYILPPRLKIE 298
Query: 333 QLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNM 392
QLS NL ALLP LS ++DIIPKDTL+WKLKLLKSA+AY NSRLHAVKAEVLVLASG D M
Sbjct: 299 QLSGNLTALLPYLSGLADIIPKDTLVWKLKLLKSAAAYTNSRLHAVKAEVLVLASGADYM 358
Query: 393 LPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSRKLDSVADFL 452
LPS DEAKRL NSLQNCIVR+FKDNGHTLLLE+GI+LLTIIKGT KYRRSR++D V+DFL
Sbjct: 359 LPSADEAKRLKNSLQNCIVRHFKDNGHTLLLEDGINLLTIIKGTGKYRRSRRIDFVSDFL 418
Query: 453 PPSRQEFKYAFDQVVG 468
PPS EFK F ++ G
Sbjct: 419 PPSMSEFKRGFYEISG 434
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224131374|ref|XP_002328523.1| predicted protein [Populus trichocarpa] gi|222838238|gb|EEE76603.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 602 bits (1553), Expect = e-169, Method: Compositional matrix adjust.
Identities = 311/436 (71%), Positives = 362/436 (83%), Gaps = 19/436 (4%)
Query: 48 MASVINFPVSPSFVINSQYKTSFRARAQSVGGG-DSTVLSSGSIAVNGDPVSREKEKNG- 105
M V+N V P FV NS+ K R R QS+G G +S +LSS SI V G + EKEKNG
Sbjct: 1 MPLVVNSLVLPYFVTNSEAKLRSRVRVQSLGSGRESKILSSDSIPVKGTSIE-EKEKNGD 59
Query: 106 --------------ALIDVGNGTLK-PRVEKKKLVKNVISEELEVLWDDGYGTDSVKDYL 150
LID GNG LK RVEKK+ VK+VIS +LEVLWDDGYGT +V+DYL
Sbjct: 60 LVDGFVRKIEKSDEGLIDGGNGRLKYTRVEKKR-VKDVISNDLEVLWDDGYGTKTVRDYL 118
Query: 151 DAAKEIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRC 210
+ AKEIIKPDGGPPRWFCPV+CG+PLK SP LLF PGIDG+GLGL LHHK LGK FEVRC
Sbjct: 119 EGAKEIIKPDGGPPRWFCPVECGQPLKDSPILLFFPGIDGVGLGLTLHHKALGKVFEVRC 178
Query: 211 LHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLIL 270
LHIPVYDRTPFEGLVKFVE+ VR EHASSP KPIYLVGDSFGGCLALAVAARNP IDL+L
Sbjct: 179 LHIPVYDRTPFEGLVKFVEKIVRLEHASSPNKPIYLVGDSFGGCLALAVAARNPEIDLVL 238
Query: 271 ILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIK 330
IL+NPATSF RSQLQP FP+L+A+PDELH AVPYLLS+VMGDP+KMAMVNIE++LPP ++
Sbjct: 239 ILANPATSFNRSQLQPFFPLLEALPDELHNAVPYLLSFVMGDPVKMAMVNIESKLPPGLQ 298
Query: 331 LEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKD 390
+EQLSNNL A+LP LS ++DIIPKDTLLWKLKLLKSA+AYANSRLH+VKAEVLVL+SGKD
Sbjct: 299 IEQLSNNLTAMLPSLSGLADIIPKDTLLWKLKLLKSAAAYANSRLHSVKAEVLVLSSGKD 358
Query: 391 NMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSRKLDSVAD 450
MLPS DE++RL +SL+NC VR+FK+NGHT+LLE+G++LLTIIKGT KYRRSR+LD V++
Sbjct: 359 QMLPSGDESQRLKSSLKNCTVRHFKENGHTILLEDGVNLLTIIKGTSKYRRSRRLDFVSN 418
Query: 451 FLPPSRQEFKYAFDQV 466
++PPS EFK F++V
Sbjct: 419 YVPPSMSEFKRGFEEV 434
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224125508|ref|XP_002319604.1| predicted protein [Populus trichocarpa] gi|222857980|gb|EEE95527.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 296/421 (70%), Positives = 339/421 (80%), Gaps = 21/421 (4%)
Query: 48 MASVINFPVSPSFVINSQYKTSFRARAQSVGGGDSTVLSSGSIAVNGDPVSREKEKNGAL 107
MAS+ +SP +NS K F RAQS+GGGDSTVLSS I VNG KEKNGAL
Sbjct: 1 MASIFTCNISPYVALNSGNKPRFGVRAQSLGGGDSTVLSSDEIVVNGTSFVGPKEKNGAL 60
Query: 108 IDVGNGTLKPRVEKKKLVKNVISEELEVLWDDGYGTDSVKDYLDAAKEIIKPDGGPPRWF 167
ID GN LE+LWDDG+GT +VKDYLD AKEIIKPDGGPPRWF
Sbjct: 61 IDGGN--------------------LELLWDDGHGTKTVKDYLDGAKEIIKPDGGPPRWF 100
Query: 168 CPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTPFEGLVKF 227
CP +CG+PLK SP LLFLPG+DG+GLGL LHHK LGKAFEVRCLHIPVYDRT FEGLVK
Sbjct: 101 CPAECGKPLKDSPVLLFLPGLDGVGLGLALHHKALGKAFEVRCLHIPVYDRTTFEGLVKI 160
Query: 228 VEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPL 287
VEETVR EHASSP KPIYLVG+SFG CLALAVAARNP IDL+LIL NPATSF RSQL PL
Sbjct: 161 VEETVRLEHASSPNKPIYLVGESFGACLALAVAARNPKIDLVLILVNPATSFSRSQL-PL 219
Query: 288 FPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSV 347
PIL+A+PD LH PYL+ +V G+P+KMAM NIE +LPPR++ +QL +NL ALLP +SV
Sbjct: 220 LPILEALPDGLHDVFPYLVGFVTGNPVKMAMANIEYKLPPRLQFQQLYHNLTALLPSVSV 279
Query: 348 MSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ 407
+SDIIPK+TL+W+LKLLKSA+AYANSRLHAVKAEVLVLASG DN+LPS+DEA RL +SL+
Sbjct: 280 LSDIIPKETLIWRLKLLKSAAAYANSRLHAVKAEVLVLASGNDNLLPSKDEAHRLKSSLK 339
Query: 408 NCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSRKLDSVADFLPPSRQEFKYAFDQVV 467
NC VR FKDNGH++L+E+G++LLTIIKGTCKYRRSR+LD V+DFLPPS EFK AFD+V
Sbjct: 340 NCKVRFFKDNGHSMLMEDGLNLLTIIKGTCKYRRSRRLDLVSDFLPPSMSEFKCAFDEVT 399
Query: 468 G 468
G
Sbjct: 400 G 400
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359487917|ref|XP_002271452.2| PREDICTED: acyltransferase-like protein At1g54570, chloroplastic-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 302/419 (72%), Positives = 352/419 (84%), Gaps = 1/419 (0%)
Query: 48 MASVINFPVS-PSFVINSQYKTSFRARAQSVGGGDSTVLSSGSIAVNGDPVSREKEKNGA 106
MASV +F V+ PSFV+ S+ K+ RA+ Q + G DS+++SS S+ VNG V +K K
Sbjct: 1 MASVSSFRVALPSFVLKSECKSRNRAQIQCLTGPDSSMVSSDSVLVNGASVVGDKSKIEP 60
Query: 107 LIDVGNGTLKPRVEKKKLVKNVISEELEVLWDDGYGTDSVKDYLDAAKEIIKPDGGPPRW 166
LI+ N L +VE+KK VK + E+LEVLWDDGYGT++VKDYL+ +KE+I+PDGGPPRW
Sbjct: 61 LINGENRRLGSKVEEKKSVKYDVKEQLEVLWDDGYGTETVKDYLEISKEMIRPDGGPPRW 120
Query: 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTPFEGLVK 226
FCPV CG+PLK SP LLFLPGIDG+GLGLILHHK LGK FEVRC+HIPVYDRTPFEGLVK
Sbjct: 121 FCPVACGQPLKDSPVLLFLPGIDGVGLGLILHHKALGKVFEVRCMHIPVYDRTPFEGLVK 180
Query: 227 FVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQP 286
VE+TVR EHASSP KPIYL+G+SFGGCLALAVAARNPTIDL++IL NPATSFGRSQLQP
Sbjct: 181 LVEKTVRLEHASSPNKPIYLLGESFGGCLALAVAARNPTIDLVVILVNPATSFGRSQLQP 240
Query: 287 LFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLS 346
L PIL+++PD LH VPYLLS++MGDP+KMAMVNI++ LPP +EQLS NL ALLP LS
Sbjct: 241 LLPILESLPDGLHFTVPYLLSFIMGDPMKMAMVNIDSTLPPPFVVEQLSGNLTALLPCLS 300
Query: 347 VMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSL 406
+SDIIPKDTL WKLKLLKSA+AYANSRLHAVKAEVL+LASGKDNMLPS DEA+RL N L
Sbjct: 301 GLSDIIPKDTLHWKLKLLKSAAAYANSRLHAVKAEVLLLASGKDNMLPSGDEARRLWNLL 360
Query: 407 QNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSRKLDSVADFLPPSRQEFKYAFDQ 465
QNC VR FKDNGHTLLLE+G++LLTIIKG +YRRSR+ D V+DFLPPS E K AFDQ
Sbjct: 361 QNCRVRYFKDNGHTLLLEDGVNLLTIIKGALRYRRSRRHDYVSDFLPPSMSELKRAFDQ 419
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224131378|ref|XP_002328524.1| predicted protein [Populus trichocarpa] gi|222838239|gb|EEE76604.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 262/370 (70%), Positives = 312/370 (84%), Gaps = 1/370 (0%)
Query: 99 REKEKNGALIDVGNGTLKPRVEKKKLVKNVISEELEVLWDDGYGTDSVKDYLDAAKEIIK 158
REKEK G D N +LK VEKK VK+VIS L+VLWDDGYGT +VKDY + AKE+I+
Sbjct: 22 REKEKTGGRADAWNASLKCGVEKK-CVKDVISSHLDVLWDDGYGTKTVKDYFEEAKEMIR 80
Query: 159 PDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDR 218
PDGGPPRWFCPV+CG+PLK SP LLF PG+DG+G L LHHK LGK FEVRCLHIPV DR
Sbjct: 81 PDGGPPRWFCPVECGQPLKDSPVLLFCPGLDGVGSALALHHKALGKVFEVRCLHIPVRDR 140
Query: 219 TPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278
TPFEGLV VE+TVR EHASSP KPIYL+GDSFGGCL LA+AARNP IDL++IL+NPATS
Sbjct: 141 TPFEGLVTIVEKTVRLEHASSPSKPIYLLGDSFGGCLVLAIAARNPEIDLVVILANPATS 200
Query: 279 FGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNL 338
F RSQLQPLFP+ +A PD L+ A+PYLLS++MGDP+KMA VNI++RLP R+++EQL NL
Sbjct: 201 FDRSQLQPLFPLSEAWPDGLYNAMPYLLSFIMGDPVKMARVNIDHRLPRRLQIEQLFQNL 260
Query: 339 PALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDE 398
ALLP LS ++DI+PKDTL+WKLKLLKSA++Y NSR+HAVKAEVLVL+SG D MLPS DE
Sbjct: 261 IALLPCLSDLADIVPKDTLIWKLKLLKSAASYTNSRIHAVKAEVLVLSSGNDYMLPSGDE 320
Query: 399 AKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSRKLDSVADFLPPSRQE 458
A+RL +SL+NC VR FKDNGHT+LLE+G++LLT+IKGT KYRRSR ++ V DF+PPS E
Sbjct: 321 AQRLKSSLKNCTVRYFKDNGHTILLEDGVNLLTVIKGTGKYRRSRTINFVTDFVPPSMSE 380
Query: 459 FKYAFDQVVG 468
FKY D++VG
Sbjct: 381 FKYGNDELVG 390
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|197312907|gb|ACH63234.1| esterase/lipase/thioesterase family protein [Rheum australe] | Back alignment and taxonomy information |
|---|
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 277/428 (64%), Positives = 342/428 (79%), Gaps = 9/428 (2%)
Query: 48 MASVINFPVSPSFVINSQYKT--SFRARAQ-SVGGGDSTVLSSGSIAVNGDP-VSREKEK 103
MAS++ F SP +S+++ S+ R S+ +S+ + S VNG P V +E EK
Sbjct: 1 MASMLTFRASPCLWRSSKFRHGPSYPGRIHTSLSDAESSAVLSADSDVNGAPYVVKEIEK 60
Query: 104 NGALI---DVGNGTLKPRVEKKKLVKNVISEELEVLWDDGYGTDSVKDYLDAAKEIIKPD 160
+ I D GNG LK + +++LV N E+LE LW+DG+G+ S+KDYLD AK++IK D
Sbjct: 61 MVSSITPVDGGNGNLKYKKREEELVVN--PEKLEPLWEDGFGSASMKDYLDIAKDLIKSD 118
Query: 161 GGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP 220
GGPPRWFCPV+CGRPLK SP LLFLPGIDG+GLGLI+HH PLG+ FEVRC+HIP DRT
Sbjct: 119 GGPPRWFCPVECGRPLKDSPLLLFLPGIDGVGLGLIMHHSPLGRVFEVRCMHIPTQDRTS 178
Query: 221 FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFG 280
FEGLV FVE+TVR+EHASSP+KPIYLVGDSFGGCLAL +AARNPT+DL+LIL+NP T
Sbjct: 179 FEGLVDFVEQTVRQEHASSPDKPIYLVGDSFGGCLALTIAARNPTVDLVLILANPTTPVE 238
Query: 281 RSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPA 340
RSQLQPLFP+L+A+PDELH AVPYLLS+VMG+P+KMAM N+ R+PP L LS NL
Sbjct: 239 RSQLQPLFPLLEALPDELHIAVPYLLSFVMGEPVKMAMANVNTRVPPAQVLRDLSANLTG 298
Query: 341 LLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAK 400
LLPRLSV+SDIIPKDTLLWKLKLLKSA+AY N+RL VKA+VL+LASGKDN+LPS +EAK
Sbjct: 299 LLPRLSVLSDIIPKDTLLWKLKLLKSAAAYTNARLRRVKAQVLILASGKDNLLPSGEEAK 358
Query: 401 RLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSRKLDSVADFLPPSRQEFK 460
RL++ L++C VRNFK+NGHTLLLE+GI+LLT+IKGT YRRS++++ V DFLPPSR EF
Sbjct: 359 RLSSVLKDCTVRNFKENGHTLLLEDGINLLTVIKGTEMYRRSKRINYVTDFLPPSRSEFN 418
Query: 461 YAFDQVVG 468
+AF Q+ G
Sbjct: 419 HAFQQING 426
|
Source: Rheum australe Species: Rheum australe Genus: Rheum Family: Polygonaceae Order: Caryophyllales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224125526|ref|XP_002319608.1| predicted protein [Populus trichocarpa] gi|222857984|gb|EEE95531.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust.
Identities = 252/348 (72%), Positives = 298/348 (85%)
Query: 121 KKKLVKNVISEELEVLWDDGYGTDSVKDYLDAAKEIIKPDGGPPRWFCPVDCGRPLKGSP 180
KKK VK+VIS +L+VLWDDGYGT + KD+ + AKE+I+PDGGPPRWFCP +CG+PLK SP
Sbjct: 1 KKKSVKDVISSDLDVLWDDGYGTKTAKDFFEGAKEMIRPDGGPPRWFCPTECGQPLKDSP 60
Query: 181 TLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSP 240
LLF PGI G+GL L LHHK LGK FEVRCLHIPV DRTPFEGLVKFVEETVR EHASSP
Sbjct: 61 ILLFCPGIVGVGLALTLHHKALGKVFEVRCLHIPVNDRTPFEGLVKFVEETVRLEHASSP 120
Query: 241 EKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHC 300
KPIYLVGDSFGGCL LAVAARNP IDL++IL+NPATSF RSQL+PL P+ +A+PD L+
Sbjct: 121 NKPIYLVGDSFGGCLVLAVAARNPEIDLVVILANPATSFDRSQLRPLIPLWEALPDGLYN 180
Query: 301 AVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWK 360
A+PYLLS+VMG+P++MA VNIE RLPPR+++EQL NL ALLP LS + DIIPKDTL+WK
Sbjct: 181 ALPYLLSFVMGNPVEMARVNIEYRLPPRLQIEQLFQNLIALLPHLSDLVDIIPKDTLIWK 240
Query: 361 LKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHT 420
LKLLKSA++YANSRLHAVKAEVLVL+SG D+MLPS DEA+RL +L+NC VR FKDNGH
Sbjct: 241 LKLLKSAASYANSRLHAVKAEVLVLSSGNDHMLPSGDEAQRLKRTLKNCTVRYFKDNGHN 300
Query: 421 LLLEEGISLLTIIKGTCKYRRSRKLDSVADFLPPSRQEFKYAFDQVVG 468
+L+E G++LL +IKGT KYRRSR++D V DF+PPS EFK +D+V G
Sbjct: 301 ILMEGGVNLLAVIKGTGKYRRSRRIDLVLDFIPPSMSEFKQGYDEVFG 348
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224125518|ref|XP_002319606.1| predicted protein [Populus trichocarpa] gi|222857982|gb|EEE95529.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 255/422 (60%), Positives = 316/422 (74%), Gaps = 29/422 (6%)
Query: 48 MASVINFPVSPSFVINSQYKTSFRARAQSVGGGDSTVLSSGSIAVNGDPVSREKEKNGAL 107
MAS + + P F +NS K F+AR QS S S+A+
Sbjct: 1 MASFVTSGILPCFGLNSDVKPRFQARVQS----------SASVALK-------------- 36
Query: 108 IDVGNGTLKPRVEKKKLVKNVISEELEVLWDDGYGTDSVKDYLDAAKEIIKPDGGPPRWF 167
G LKP +E+KK V + ++LE LWDDGYGT ++KDY D AKE+I+PDGGPPRWF
Sbjct: 37 ----LGRLKPSIEEKKWVNDFGPKDLEPLWDDGYGTKTIKDYFDGAKEMIRPDGGPPRWF 92
Query: 168 CPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTPFEGLVKF 227
CP++CG+PLK SPTLLFLPG+DG+GLGL LHHK LGKAFEV CLHIPVYDRT FEGLVK
Sbjct: 93 CPIECGQPLKSSPTLLFLPGVDGVGLGLTLHHKALGKAFEVLCLHIPVYDRTSFEGLVKN 152
Query: 228 VEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPL 287
VEETVR EHA +P KPIYLVG+S GGCLA+AVAARNP +DL++IL+NPATSFGRS+LQP
Sbjct: 153 VEETVRLEHARNPNKPIYLVGESIGGCLAIAVAARNPKVDLVVILANPATSFGRSKLQPF 212
Query: 288 FPILKAMPDELHCAVPYLLSYVM-GDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLS 346
PIL+A+P++LH V ++ G+P+KMAMV +E+RLP R+K+ +L NL ALL LS
Sbjct: 213 LPILEAVPNQLHNGVANFFYFLTSGNPVKMAMVGVEDRLPSRLKIGKLYQNLMALLHNLS 272
Query: 347 VMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSL 406
V++DIIPKDTL+WK+KLL+SA+ YANS LH VKAEVL+LAS +D +LPS DEA RL + L
Sbjct: 273 VVADIIPKDTLVWKMKLLRSAADYANSCLHNVKAEVLLLASERDRLLPSRDEALRLKSLL 332
Query: 407 QNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSRKLDSVADFLPPSRQEFKYAFDQV 466
QNC VRNFK NGH +LLE+G+ LLT IKGT KYRRS+++D V+D+LPPS EFK F++
Sbjct: 333 QNCTVRNFKGNGHAILLEDGVGLLTAIKGTSKYRRSKRIDFVSDYLPPSTSEFKSFFEEA 392
Query: 467 VG 468
G
Sbjct: 393 YG 394
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297853422|ref|XP_002894592.1| esterase/lipase/thioesterase family protein [Arabidopsis lyrata subsp. lyrata] gi|297340434|gb|EFH70851.1| esterase/lipase/thioesterase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 259/419 (61%), Positives = 321/419 (76%), Gaps = 20/419 (4%)
Query: 56 VSPSFVINSQYKTSFRARAQSVGGGDST-----VLSSGSIAVNGDPVSREKEKNGALIDV 110
V P+ +S + +F+ RAQ G T V ++GS++V+ V +K N
Sbjct: 10 VLPNLRWSSNQRRNFKVRAQISGENKKTTSLEPVNNNGSVSVS--IVQNQKGANEV---- 63
Query: 111 GNGTLKPRVEKKKLVKNVISEELEVLWDDGYGTDSVKDYLDAAKEIIKPDGGPPRWFCPV 170
NG +K + K ++S+E+E+LWDDGYG+ SVKDY AA+EI+KPDGGPPRWF PV
Sbjct: 64 -NGKVKSQ-------KKIVSDEIELLWDDGYGSKSVKDYFAAAREILKPDGGPPRWFSPV 115
Query: 171 DCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTPFEGLVKFVEE 230
DCGRP++ +PTLLFLPG+DG G+GL+ HHK LGKAF V CLHIPV DRTPFEGLVK VE+
Sbjct: 116 DCGRPVEDAPTLLFLPGMDGTGMGLVPHHKALGKAFHVWCLHIPVLDRTPFEGLVKVVED 175
Query: 231 TVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPI 290
+R+E A+ P KPIYLVGDSFGGCLALAVAARN ++DL+LIL NPATSF RS LQPL PI
Sbjct: 176 VLRQEQATRPNKPIYLVGDSFGGCLALAVAARNRSLDLVLILVNPATSFDRSPLQPLLPI 235
Query: 291 LKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLP-ALLPRLSVMS 349
L+ +P+ELH VPY LS++MGDPIKMA + I+N+LP IK+E+L L +LP LS +
Sbjct: 236 LEMVPEELHFTVPYALSFIMGDPIKMATLGIDNQLPTGIKMEKLRQRLTKTMLPLLSELV 295
Query: 350 DIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNC 409
IIP++TLLWKLKLL+S SAYANSR+HAV+AEVLVLASGKD MLPS++EAKRL+ L+NC
Sbjct: 296 GIIPRETLLWKLKLLRSGSAYANSRIHAVQAEVLVLASGKDMMLPSQEEAKRLHGVLKNC 355
Query: 410 IVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSRKLDSVADFLPPSRQEFKYAFDQVVG 468
VR FKDNGHTLLLE+ ISLLT+IKGT KYRRS + D V+DFLPPS+ E YA D+V+G
Sbjct: 356 SVRCFKDNGHTLLLEDSISLLTVIKGTGKYRRSWRYDLVSDFLPPSKGELAYALDEVLG 414
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Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356504086|ref|XP_003520830.1| PREDICTED: acyltransferase-like protein At1g54570, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 279/423 (65%), Positives = 327/423 (77%), Gaps = 12/423 (2%)
Query: 48 MASVINFPVSP-SFVINSQYKTSFRARAQSVGGGDSTVLSSGSIAVNGDPVSREKEKNGA 106
MA V F S V + +++ RA S ++ +GS + NG + +E++K
Sbjct: 1 MALVTGFLASHVGAVRHHRFEVGIGVRAVSSSESETVAAVNGSSSRNGSLLLKEEKKVPF 60
Query: 107 LIDVGNGTLKPRVEKKKLVKNVISEE-LEVLWDDGYGTDSVKDYLDAAKEIIKPDGGPPR 165
L RVE+KK + EE L LWDDGYG SV+DY AAKE+ K DGGPPR
Sbjct: 61 L----------RVEEKKNKRGEEEEEGLAALWDDGYGRRSVEDYFAAAKEMCKSDGGPPR 110
Query: 166 WFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTPFEGLV 225
WFCP++CG P K SPTLLFLPG+DG GLGL LHH+ LGKAFEVRCLHIPV+DRTPFEGLV
Sbjct: 111 WFCPLECGPPFKDSPTLLFLPGMDGTGLGLTLHHQALGKAFEVRCLHIPVHDRTPFEGLV 170
Query: 226 KFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQ 285
K V E V+ E A SP KPIYLVGDSFGG LALAVAARNPT+DL+LIL+NPATSFG+SQLQ
Sbjct: 171 KLVGEAVKLECALSPNKPIYLVGDSFGGSLALAVAARNPTVDLVLILANPATSFGQSQLQ 230
Query: 286 PLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRL 345
PLFP ++A+PDELH AVP+LLS++MGDP+KMA VNI+N+LPP K+EQLS NL ALLP L
Sbjct: 231 PLFPFMEALPDELHVAVPFLLSFIMGDPVKMASVNIDNKLPPAKKIEQLSYNLTALLPCL 290
Query: 346 SVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNS 405
++DIIP+DTLLWKLKLLKSA+AYANSR+HAVKAEVLVLASGKDNMLPS +EA+RL
Sbjct: 291 PELADIIPRDTLLWKLKLLKSAAAYANSRIHAVKAEVLVLASGKDNMLPSINEAQRLMGL 350
Query: 406 LQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSRKLDSVADFLPPSRQEFKYAFDQ 465
LQNC VR FKD+GHTLLLE+GI LLTIIKGTC YRRSR+ D V DF+PPS EF+YA DQ
Sbjct: 351 LQNCKVRVFKDSGHTLLLEDGIGLLTIIKGTCMYRRSRRHDLVRDFIPPSMTEFRYAMDQ 410
Query: 466 VVG 468
VVG
Sbjct: 411 VVG 413
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Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 468 | ||||||
| TAIR|locus:2199481 | 704 | PES1 "AT1G54570" [Arabidopsis | 0.865 | 0.575 | 0.548 | 6.6e-113 | |
| TAIR|locus:2088404 | 701 | PES2 "AT3G26840" [Arabidopsis | 0.679 | 0.453 | 0.384 | 1.1e-55 | |
| TAIR|locus:2088474 | 634 | AT3G26820 "AT3G26820" [Arabido | 0.666 | 0.492 | 0.375 | 3.5e-52 | |
| TAIR|locus:2163091 | 684 | AT5G41120 "AT5G41120" [Arabido | 0.660 | 0.451 | 0.386 | 2.4e-51 |
| TAIR|locus:2199481 PES1 "AT1G54570" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1114 (397.2 bits), Expect = 6.6e-113, P = 6.6e-113
Identities = 227/414 (54%), Positives = 285/414 (68%)
Query: 56 VSPSFVINSQYKTSFRARAQSVGGGDSTVLSSGSIAVNGDPVSREKEKNGALIDVGNGTL 115
V P+ ++S + +F+ RAQ + G + S + NG +N + NG
Sbjct: 10 VLPNLRLSSNQRRNFKVRAQ-ISGENKKATSLEPVNNNGSVSLSTTVQNQKGANEVNG-- 66
Query: 116 KPRVEKKKLVKNVISEELEVLWDDGYGTDSVKDYLDAAKEIIKPDGGPPRWFCPVDCGRP 175
K K + ++S+E+E+LWDDGYG+ SVKDY AAKEI+K DGGPPRWF PVDCGRP
Sbjct: 67 -----KGKSKRKIVSDEIELLWDDGYGSKSVKDYFAAAKEILKADGGPPRWFSPVDCGRP 121
Query: 176 LKGSPTXXXXXXXXXXXXXXXXXXXXXXXAFEVRCLHIPVYDRTPFEGLVKFVEETVRRE 235
++ +PT AF V CLHIPV DRTPFEGL+K VE+ +R+E
Sbjct: 122 VEDAPTLLFLPGMDGTGMGLVPHHKALGKAFHVSCLHIPVLDRTPFEGLLKVVEDVLRQE 181
Query: 236 HASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMP 295
A+ P KPIYLVGDSFGGCLALAVAARN ++DL+LIL NPATSF RS LQPL PIL+ +P
Sbjct: 182 QATRPNKPIYLVGDSFGGCLALAVAARNRSLDLVLILVNPATSFDRSPLQPLLPILEMVP 241
Query: 296 DELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLP-ALLPRLSVMSDIIPK 354
+ELH VPY LS++MGDPIKMA + I+N+LP +K+E+L L +LP LS + IIP+
Sbjct: 242 EELHFTVPYALSFIMGDPIKMATLGIDNQLPTGVKIEKLRQRLTKTMLPLLSELGGIIPR 301
Query: 355 DTXXXXXXXXXSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNF 414
+T S AYANSR+HAV+AEVLVLASGKD MLPS++EAKRL+ L+NC VR F
Sbjct: 302 ETLLWKLKLLRSGCAYANSRIHAVQAEVLVLASGKDMMLPSQEEAKRLHGLLKNCSVRCF 361
Query: 415 KDNGHTLLLEEGISLLTIIKGTCKYRRSRKLDSVADFLPPSRQEFKYAFDQVVG 468
KDNGHTLLLE+ ISLLT+IKGT KYRRS + D V+DFLPPS+ E YA D+V+G
Sbjct: 362 KDNGHTLLLEDSISLLTVIKGTGKYRRSWRYDLVSDFLPPSKGELAYALDEVLG 415
|
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| TAIR|locus:2088404 PES2 "AT3G26840" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 125/325 (38%), Positives = 175/325 (53%)
Query: 146 VKDYLDAAKEIIKPDGGPPRWFCPVDCGRPLKGSPTXXXXXXXXXXXXXXXXXXXXXXXA 205
+ D+L+ A+E + GGPPRWF P++CG SP
Sbjct: 87 LSDFLEEAREFVGDGGGPPRWFSPLECGAQATNSPLLLYLPGIDGTGLGLIRHHKKLGEI 146
Query: 206 FEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPT 265
F++ CLHIPV DRTP + LVK +EETV+ E+ P +PIYLVG+S G CLAL VAARNP
Sbjct: 147 FDIWCLHIPVSDRTPVKDLVKLIEETVKSENFRLPNRPIYLVGESIGACLALDVAARNPN 206
Query: 266 IDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSY--VMGDPIKMAMVNIEN 323
IDL LIL NPAT +QPL +L +PD L + + + GDP+ + + N
Sbjct: 207 IDLSLILVNPATHVNNFMVQPLSGMLNVLPDGLPTLLEDIFDFGFKQGDPLTGMLDALSN 266
Query: 324 RLPPRIKLEQLSNNLP----ALLPRLSVMSDIIPKDTXXXXXXXXXSASAYANSRLHAVK 379
+ ++ + + A+ L +S + PKDT A A NS +++V+
Sbjct: 267 EFSVQ-RMGGVGGGMLRDVLAVSANLPTLSRMFPKDTLLWKLEMLKYAIASVNSHIYSVR 325
Query: 380 AEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKY 439
AE L+L SG+D+ L E++ R + +L CIVR DNG LLE+G+ L TIIK TC Y
Sbjct: 326 AETLILLSGRDHWLLKEEDIDRYSRTLPKCIVRKLDDNGQFPLLEDGVDLATIIKCTCFY 385
Query: 440 RRSRKLDSVADFLPPSRQEFKYAFD 464
RR + D + D++ P+ E K D
Sbjct: 386 RRGKSHDHITDYIMPTTFELKQQVD 410
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| TAIR|locus:2088474 AT3G26820 "AT3G26820" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 119/317 (37%), Positives = 169/317 (53%)
Query: 153 AKEIIKPDGGPPRWFCPVDCGRPLKGSPTXXXXXXXXXXXXXXXXXXXXXXXAFEVRCLH 212
A++ + GGPPRWF P++C SP F++ CLH
Sbjct: 61 ARDFVGDGGGPPRWFSPLECRAQAPNSPLLLFLPGIDGTGLGLIRHHKKLGEIFDIWCLH 120
Query: 213 IPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILIL 272
IPV DRTPF+ LVK +E TV+ E+ P +PIYLVG+S G CLAL VAARNP +DL LIL
Sbjct: 121 IPVSDRTPFKDLVKLIERTVKSENYRFPNRPIYLVGESIGACLALDVAARNPNVDLALIL 180
Query: 273 SNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLE 332
NPAT +PL +L +PD + + + G P+ + + N + ++
Sbjct: 181 VNPATHVNNFMSKPLLGMLNVLPDGIPTLWEDVFGFKQGAPLTGILEAMSNEFSVQ-RMG 239
Query: 333 QLSN----NLPALLPRLSVMSDIIPKDTXXXXXXXXXSASAYANSRLHAVKAEVLVLASG 388
+ +L A+ L +S + KDT SA A NS +++VKAE L+L SG
Sbjct: 240 GVGGGMLRDLFAVSANLPTLSRMFSKDTLLWKLEMLKSAIASVNSHIYSVKAETLILPSG 299
Query: 389 KDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSRKLDSV 448
+D L +E++ R + +L NCIVR DNG LLE+ + L TIIK TC YRR + D V
Sbjct: 300 RDQWLLNEEDIVRYSRTLPNCIVRKLDDNGQFPLLEDSLDLATIIKLTCFYRRGKSHDYV 359
Query: 449 ADFLPPSRQEFKYAFDQ 465
+D++ P+ E + D+
Sbjct: 360 SDYIKPTPFELQQLLDE 376
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| TAIR|locus:2163091 AT5G41120 "AT5G41120" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 124/321 (38%), Positives = 174/321 (54%)
Query: 145 SVKDYLDAAKEIIKPDGG---PPRWFCPVDCGRPLKGSPTXXXXXXXXXXXXXXXXXXXX 201
S+ D+L A + + DGG PPRWF P++CG SP
Sbjct: 72 SLTDFLTEAGDFVNSDGGDGGPPRWFSPLECGARAPESPLLLYLPGIDGTGLGLIRQHKR 131
Query: 202 XXXAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAA 261
F++ CLH PV DRTP + K +E+TVR EH P +PIY+VG+S G LAL VAA
Sbjct: 132 LGEIFDIWCLHFPVKDRTPARDIGKLIEKTVRSEHYRFPNRPIYIVGESIGASLALDVAA 191
Query: 262 RNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKM--AMV 319
NP IDL+LIL+NP T F LQP+ +L+ +PD VP L++ G +M M+
Sbjct: 192 SNPDIDLVLILANPVTRFTNLMLQPVLALLEILPD----GVPGLITENFGFYQEMFETML 247
Query: 320 NIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTXXXXXXXXXSASAYANSRLHAVK 379
N EN + L + A L + I PKDT SASA ANS++ V
Sbjct: 248 N-ENDAAQMGR--GLLGDFFATSSNLPTLIRIFPKDTLLWKLQLLKSASASANSQMDTVN 304
Query: 380 AEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKY 439
A+ L+L SG+D L ++++ +RL +L C VR ++NG L LE+G+ L++IIK Y
Sbjct: 305 AQTLILLSGRDQWLMNKEDIERLRGALPRCEVRELENNGQFLFLEDGVDLVSIIKRAYYY 364
Query: 440 RRSRKLDSVADFLPPSRQEFK 460
RR + LD ++D++ P+ EFK
Sbjct: 365 RRGKSLDYISDYILPTPFEFK 385
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.137 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 468 424 0.00084 118 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 4
No. of states in DFA: 611 (65 KB)
Total size of DFA: 244 KB (2132 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 34.37u 0.12s 34.49t Elapsed: 00:00:03
Total cpu time: 34.37u 0.12s 34.49t Elapsed: 00:00:03
Start: Thu May 9 19:21:03 2013 End: Thu May 9 19:21:06 2013
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.3.1 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | fgenesh4_pg.C_LG_XIII000167 | hypothetical protein (689 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 468 | |||
| COG0596 | 282 | COG0596, MhpC, Predicted hydrolases or acyltransfe | 3e-06 | |
| pfam12695 | 145 | pfam12695, Abhydrolase_5, Alpha/beta hydrolase fam | 2e-05 | |
| pfam00561 | 226 | pfam00561, Abhydrolase_1, alpha/beta hydrolase fol | 3e-04 | |
| pfam00975 | 224 | pfam00975, Thioesterase, Thioesterase domain | 0.001 | |
| COG2267 | 298 | COG2267, PldB, Lysophospholipase [Lipid metabolism | 0.002 | |
| COG3319 | 257 | COG3319, COG3319, Thioesterase domains of type I p | 0.003 |
| >gnl|CDD|223669 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 48.5 bits (114), Expect = 3e-06
Identities = 52/265 (19%), Positives = 82/265 (30%), Gaps = 16/265 (6%)
Query: 178 GSPTLLFLPGIDGLG---LGLILHHKPLGKAFEVRCLHIPVYDRTPFEG--LVKFVEETV 232
G P L+ L G G + L + V + + R+ G L + ++
Sbjct: 20 GGPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSDPAGYSLSAYADDLA 79
Query: 233 RREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILK 292
A EK + LVG S GG +ALA+A R+P L+L PA G + P
Sbjct: 80 ALLDALGLEKVV-LVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGA 138
Query: 293 AMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDII 352
A LL + L+ L A L + +
Sbjct: 139 APLAA---LADLLLGLDAAAFAALLAALGLLAALAAAARAGLAEALRAPLLGAAAAAFAR 195
Query: 353 PKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLP---SEDEAKRLNNSLQNC 409
L L L + L++ D ++P + A L N +
Sbjct: 196 AARADLAAALLALLDRDLRA-ALARITVPTLIIHGEDDPVVPAELARRLAAALPNDARLV 254
Query: 410 IVRNFKDNGHTLLLEEGISLLTIIK 434
++ GH LE + +
Sbjct: 255 VIP---GAGHFPHLEAPEAFAAALL 276
|
Length = 282 |
| >gnl|CDD|221718 pfam12695, Abhydrolase_5, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 2e-05
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 229 EETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPL- 287
E V + PE I LVG S GG +AL +AAR+P + ++L+ L L
Sbjct: 46 AEAVLADAPLDPE-RIVLVGHSLGGGVALLLAARDPRVKAAVVLAAGDPPDALDDLAKLT 104
Query: 288 FPIL 291
P+L
Sbjct: 105 VPVL 108
|
This family contains a diverse range of alpha/beta hydrolase enzymes. Length = 145 |
| >gnl|CDD|201306 pfam00561, Abhydrolase_1, alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 3e-04
Identities = 41/220 (18%), Positives = 67/220 (30%), Gaps = 29/220 (13%)
Query: 214 PVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLI--LI 271
+ F+ L + +E + + LVG S GG +ALA AA+ P D + L+
Sbjct: 18 KDFADYRFDDLAEDLE-ALLDAL---GLDKVNLVGHSMGGLIALAYAAKYP--DRVKALV 71
Query: 272 LSNPATSFG---RSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPR 328
L G + L IK +
Sbjct: 72 LVGTVHPAGLSSPLTPRGNLLGLLLDNFFNRLYDSVEALLGRA--IKQFQALGRPFVSDF 129
Query: 329 IKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASG 388
+K +LS+ + D LL + + L + L++
Sbjct: 130 LKQFELSSLIRFGETLA--------LDGLLGYALGYDLVWDRS-AALKDIDVPTLIIWGD 180
Query: 389 KDNMLP---SEDEAKRLNNSLQNCIVRNFKDNGHTLLLEE 425
D ++P SE A N+ + D GH LE+
Sbjct: 181 DDPLVPPDASEKLAALFPNAQ----LVVIDDAGHLAQLEK 216
|
This catalytic domain is found in a very wide range of enzymes. Length = 226 |
| >gnl|CDD|216224 pfam00975, Thioesterase, Thioesterase domain | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 0.001
Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 7/67 (10%)
Query: 221 FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVA----ARNPTIDLILILSNPA 276
E L + E +RR PE P L G S GG LA VA R +++ A
Sbjct: 47 IEELAEEYAEALRRIQ---PEGPYALFGHSMGGLLAFEVARRLERRGEEPAGLILSDAYA 103
Query: 277 TSFGRSQ 283
FGR +
Sbjct: 104 PHFGRRE 110
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. Length = 224 |
| >gnl|CDD|225176 COG2267, PldB, Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.002
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 9/84 (10%)
Query: 212 HIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPT-IDLIL 270
H+ + + + ET+ P P++L+G S GG +AL AR P ID L
Sbjct: 82 HVDSFAD--YVDDLDAFVETIAEPD---PGLPVFLLGHSMGGLIALLYLARYPPRIDG-L 135
Query: 271 ILSNPATSFGRSQLQPLFPILKAM 294
+LS+PA G + +
Sbjct: 136 VLSSPA--LGLGGAILRLILARLA 157
|
Length = 298 |
| >gnl|CDD|225856 COG3319, COG3319, Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 0.003
Identities = 26/95 (27%), Positives = 33/95 (34%), Gaps = 22/95 (23%)
Query: 180 PTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVY---------DRTPF---EGLVKF 227
P L G L PL A +PVY PF + +
Sbjct: 1 PPLFCFHPAGGSVLAY----APLAAALGP---LLPVYGLQAPGYGAGEQPFASLDDMAAA 53
Query: 228 VEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR 262
+RR PE P L+G S GG +A VAA+
Sbjct: 54 YVAAIRRVQ---PEGPYVLLGWSLGGAVAFEVAAQ 85
|
Length = 257 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 468 | |||
| PLN02824 | 294 | hydrolase, alpha/beta fold family protein | 99.96 | |
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 99.96 | |
| TIGR02240 | 276 | PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer | 99.95 | |
| PRK03592 | 295 | haloalkane dehalogenase; Provisional | 99.95 | |
| PRK00870 | 302 | haloalkane dehalogenase; Provisional | 99.95 | |
| TIGR03611 | 257 | RutD pyrimidine utilization protein D. This protei | 99.95 | |
| PLN02679 | 360 | hydrolase, alpha/beta fold family protein | 99.95 | |
| PLN02578 | 354 | hydrolase | 99.94 | |
| PRK03204 | 286 | haloalkane dehalogenase; Provisional | 99.94 | |
| TIGR03343 | 282 | biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die | 99.94 | |
| PLN02965 | 255 | Probable pheophorbidase | 99.94 | |
| TIGR03056 | 278 | bchO_mg_che_rel putative magnesium chelatase acces | 99.94 | |
| PLN03087 | 481 | BODYGUARD 1 domain containing hydrolase; Provision | 99.94 | |
| PRK10673 | 255 | acyl-CoA esterase; Provisional | 99.94 | |
| TIGR01738 | 245 | bioH putative pimeloyl-BioC--CoA transferase BioH. | 99.94 | |
| PHA02857 | 276 | monoglyceride lipase; Provisional | 99.94 | |
| PLN02385 | 349 | hydrolase; alpha/beta fold family protein | 99.94 | |
| TIGR02427 | 251 | protocat_pcaD 3-oxoadipate enol-lactonase. Members | 99.94 | |
| PF12697 | 228 | Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3 | 99.94 | |
| PRK10749 | 330 | lysophospholipase L2; Provisional | 99.94 | |
| KOG4178 | 322 | consensus Soluble epoxide hydrolase [Lipid transpo | 99.93 | |
| KOG4409 | 365 | consensus Predicted hydrolase/acyltransferase (alp | 99.93 | |
| PLN03084 | 383 | alpha/beta hydrolase fold protein; Provisional | 99.93 | |
| KOG1454 | 326 | consensus Predicted hydrolase/acyltransferase (alp | 99.93 | |
| PRK06489 | 360 | hypothetical protein; Provisional | 99.93 | |
| PRK11126 | 242 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl | 99.93 | |
| PLN02298 | 330 | hydrolase, alpha/beta fold family protein | 99.93 | |
| KOG2564 | 343 | consensus Predicted acetyltransferases and hydrola | 99.93 | |
| TIGR03695 | 251 | menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene | 99.92 | |
| TIGR01392 | 351 | homoserO_Ac_trn homoserine O-acetyltransferase. Th | 99.91 | |
| PRK07581 | 339 | hypothetical protein; Validated | 99.91 | |
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 99.91 | |
| TIGR01250 | 288 | pro_imino_pep_2 proline-specific peptidases, Bacil | 99.91 | |
| PRK00175 | 379 | metX homoserine O-acetyltransferase; Provisional | 99.91 | |
| PLN02652 | 395 | hydrolase; alpha/beta fold family protein | 99.91 | |
| PLN02894 | 402 | hydrolase, alpha/beta fold family protein | 99.9 | |
| COG2267 | 298 | PldB Lysophospholipase [Lipid metabolism] | 99.9 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 99.9 | |
| KOG1455 | 313 | consensus Lysophospholipase [Lipid transport and m | 99.9 | |
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 99.89 | |
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 99.89 | |
| PLN02511 | 388 | hydrolase | 99.88 | |
| COG1647 | 243 | Esterase/lipase [General function prediction only] | 99.88 | |
| TIGR01249 | 306 | pro_imino_pep_1 proline iminopeptidase, Neisseria- | 99.87 | |
| TIGR01607 | 332 | PST-A Plasmodium subtelomeric family (PST-A). Thes | 99.87 | |
| KOG2382 | 315 | consensus Predicted alpha/beta hydrolase [General | 99.86 | |
| PRK13604 | 307 | luxD acyl transferase; Provisional | 99.86 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.85 | |
| PRK10985 | 324 | putative hydrolase; Provisional | 99.84 | |
| PRK06765 | 389 | homoserine O-acetyltransferase; Provisional | 99.84 | |
| PRK05077 | 414 | frsA fermentation/respiration switch protein; Revi | 99.81 | |
| TIGR03100 | 274 | hydr1_PEP hydrolase, ortholog 1, exosortase system | 99.8 | |
| KOG2984 | 277 | consensus Predicted hydrolase [General function pr | 99.8 | |
| PF00561 | 230 | Abhydrolase_1: alpha/beta hydrolase fold A web pag | 99.79 | |
| PRK11071 | 190 | esterase YqiA; Provisional | 99.78 | |
| PRK10566 | 249 | esterase; Provisional | 99.77 | |
| TIGR01836 | 350 | PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth | 99.77 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 99.76 | |
| TIGR01838 | 532 | PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, | 99.75 | |
| PLN02872 | 395 | triacylglycerol lipase | 99.73 | |
| COG0596 | 282 | MhpC Predicted hydrolases or acyltransferases (alp | 99.72 | |
| KOG1552 | 258 | consensus Predicted alpha/beta hydrolase [General | 99.66 | |
| TIGR03101 | 266 | hydr2_PEP hydrolase, ortholog 2, exosortase system | 99.62 | |
| PRK11460 | 232 | putative hydrolase; Provisional | 99.62 | |
| COG0429 | 345 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.61 | |
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 99.61 | |
| KOG4391 | 300 | consensus Predicted alpha/beta hydrolase BEM46 [Ge | 99.59 | |
| COG2021 | 368 | MET2 Homoserine acetyltransferase [Amino acid tran | 99.58 | |
| KOG1838 | 409 | consensus Alpha/beta hydrolase [General function p | 99.57 | |
| PLN00021 | 313 | chlorophyllase | 99.57 | |
| COG3208 | 244 | GrsT Predicted thioesterase involved in non-riboso | 99.56 | |
| PLN02442 | 283 | S-formylglutathione hydrolase | 99.56 | |
| TIGR02821 | 275 | fghA_ester_D S-formylglutathione hydrolase. This m | 99.55 | |
| KOG4667 | 269 | consensus Predicted esterase [Lipid transport and | 99.54 | |
| PF03096 | 283 | Ndr: Ndr family; InterPro: IPR004142 This family c | 99.49 | |
| PF06342 | 297 | DUF1057: Alpha/beta hydrolase of unknown function | 99.49 | |
| PF02230 | 216 | Abhydrolase_2: Phospholipase/Carboxylesterase; Int | 99.49 | |
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 99.47 | |
| PF00326 | 213 | Peptidase_S9: Prolyl oligopeptidase family This fa | 99.47 | |
| KOG2931 | 326 | consensus Differentiation-related gene 1 protein ( | 99.46 | |
| TIGR01840 | 212 | esterase_phb esterase, PHB depolymerase family. Th | 99.46 | |
| PF06821 | 171 | Ser_hydrolase: Serine hydrolase; InterPro: IPR0106 | 99.44 | |
| COG0400 | 207 | Predicted esterase [General function prediction on | 99.4 | |
| PF01738 | 218 | DLH: Dienelactone hydrolase family; InterPro: IPR0 | 99.39 | |
| PF00975 | 229 | Thioesterase: Thioesterase domain; InterPro: IPR00 | 99.38 | |
| TIGR03230 | 442 | lipo_lipase lipoprotein lipase. Members of this pr | 99.37 | |
| TIGR01839 | 560 | PHA_synth_II poly(R)-hydroxyalkanoic acid synthase | 99.36 | |
| PF08538 | 303 | DUF1749: Protein of unknown function (DUF1749); In | 99.36 | |
| cd00707 | 275 | Pancreat_lipase_like Pancreatic lipase-like enzyme | 99.33 | |
| PF05448 | 320 | AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR0 | 99.32 | |
| PF06500 | 411 | DUF1100: Alpha/beta hydrolase of unknown function | 99.3 | |
| PRK10115 | 686 | protease 2; Provisional | 99.28 | |
| PRK10162 | 318 | acetyl esterase; Provisional | 99.27 | |
| PF10230 | 266 | DUF2305: Uncharacterised conserved protein (DUF230 | 99.26 | |
| TIGR00976 | 550 | /NonD putative hydrolase, CocE/NonD family. This m | 99.24 | |
| COG2945 | 210 | Predicted hydrolase of the alpha/beta superfamily | 99.23 | |
| PF12740 | 259 | Chlorophyllase2: Chlorophyllase enzyme; InterPro: | 99.17 | |
| COG0412 | 236 | Dienelactone hydrolase and related enzymes [Second | 99.15 | |
| TIGR03502 | 792 | lipase_Pla1_cef extracellular lipase, Pla-1/cef fa | 99.15 | |
| TIGR01849 | 406 | PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, | 99.15 | |
| KOG2565 | 469 | consensus Predicted hydrolases or acyltransferases | 99.15 | |
| PF05728 | 187 | UPF0227: Uncharacterised protein family (UPF0227); | 99.13 | |
| COG4757 | 281 | Predicted alpha/beta hydrolase [General function p | 99.12 | |
| PF02273 | 294 | Acyl_transf_2: Acyl transferase; InterPro: IPR0031 | 99.1 | |
| COG3545 | 181 | Predicted esterase of the alpha/beta hydrolase fol | 99.1 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 99.06 | |
| KOG2624 | 403 | consensus Triglyceride lipase-cholesterol esterase | 99.04 | |
| COG3458 | 321 | Acetyl esterase (deacetylase) [Secondary metabolit | 99.02 | |
| PF07859 | 211 | Abhydrolase_3: alpha/beta hydrolase fold A web pag | 99.01 | |
| PF07819 | 225 | PGAP1: PGAP1-like protein; InterPro: IPR012908 The | 98.98 | |
| PF10503 | 220 | Esterase_phd: Esterase PHB depolymerase | 98.98 | |
| PTZ00472 | 462 | serine carboxypeptidase (CBP1); Provisional | 98.93 | |
| COG3571 | 213 | Predicted hydrolase of the alpha/beta-hydrolase fo | 98.88 | |
| COG3243 | 445 | PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me | 98.88 | |
| PF03959 | 212 | FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 | 98.88 | |
| PF09752 | 348 | DUF2048: Uncharacterized conserved protein (DUF204 | 98.85 | |
| PF03403 | 379 | PAF-AH_p_II: Platelet-activating factor acetylhydr | 98.85 | |
| PF12146 | 79 | Hydrolase_4: Putative lysophospholipase; InterPro: | 98.85 | |
| PF08840 | 213 | BAAT_C: BAAT / Acyl-CoA thioester hydrolase C term | 98.85 | |
| PF02129 | 272 | Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 fam | 98.81 | |
| COG0657 | 312 | Aes Esterase/lipase [Lipid metabolism] | 98.78 | |
| KOG4627 | 270 | consensus Kynurenine formamidase [Amino acid trans | 98.77 | |
| PF07224 | 307 | Chlorophyllase: Chlorophyllase; InterPro: IPR01082 | 98.76 | |
| COG3319 | 257 | Thioesterase domains of type I polyketide synthase | 98.75 | |
| KOG3043 | 242 | consensus Predicted hydrolase related to dienelact | 98.73 | |
| PF06028 | 255 | DUF915: Alpha/beta hydrolase of unknown function ( | 98.73 | |
| KOG2112 | 206 | consensus Lysophospholipase [Lipid transport and m | 98.71 | |
| KOG3975 | 301 | consensus Uncharacterized conserved protein [Funct | 98.69 | |
| COG4188 | 365 | Predicted dienelactone hydrolase [General function | 98.69 | |
| KOG1515 | 336 | consensus Arylacetamide deacetylase [Defense mecha | 98.66 | |
| PRK05371 | 767 | x-prolyl-dipeptidyl aminopeptidase; Provisional | 98.65 | |
| KOG2551 | 230 | consensus Phospholipase/carboxyhydrolase [Amino ac | 98.65 | |
| PRK04940 | 180 | hypothetical protein; Provisional | 98.64 | |
| PF06057 | 192 | VirJ: Bacterial virulence protein (VirJ); InterPro | 98.64 | |
| KOG2100 | 755 | consensus Dipeptidyl aminopeptidase [Posttranslati | 98.62 | |
| smart00824 | 212 | PKS_TE Thioesterase. Peptide synthetases are invol | 98.59 | |
| KOG3847 | 399 | consensus Phospholipase A2 (platelet-activating fa | 98.47 | |
| PF05990 | 233 | DUF900: Alpha/beta hydrolase of unknown function ( | 98.46 | |
| PF01674 | 219 | Lipase_2: Lipase (class 2); InterPro: IPR002918 Li | 98.45 | |
| PLN02733 | 440 | phosphatidylcholine-sterol O-acyltransferase | 98.45 | |
| PF11339 | 581 | DUF3141: Protein of unknown function (DUF3141); In | 98.43 | |
| PF00151 | 331 | Lipase: Lipase; InterPro: IPR013818 Triglyceride l | 98.42 | |
| PF03583 | 290 | LIP: Secretory lipase ; InterPro: IPR005152 This e | 98.26 | |
| KOG3253 | 784 | consensus Predicted alpha/beta hydrolase [General | 98.25 | |
| PF00450 | 415 | Peptidase_S10: Serine carboxypeptidase; InterPro: | 98.2 | |
| COG4099 | 387 | Predicted peptidase [General function prediction o | 98.2 | |
| KOG1553 | 517 | consensus Predicted alpha/beta hydrolase BAT5 [Gen | 98.19 | |
| KOG2281 | 867 | consensus Dipeptidyl aminopeptidases/acylaminoacyl | 98.17 | |
| PF04301 | 213 | DUF452: Protein of unknown function (DUF452); Inte | 98.12 | |
| PF05677 | 365 | DUF818: Chlamydia CHLPS protein (DUF818); InterPro | 98.12 | |
| KOG4840 | 299 | consensus Predicted hydrolases or acyltransferases | 98.09 | |
| PF05057 | 217 | DUF676: Putative serine esterase (DUF676); InterPr | 98.09 | |
| COG4782 | 377 | Uncharacterized protein conserved in bacteria [Fun | 98.05 | |
| PRK10439 | 411 | enterobactin/ferric enterobactin esterase; Provisi | 98.02 | |
| COG4814 | 288 | Uncharacterized protein with an alpha/beta hydrola | 97.99 | |
| COG3509 | 312 | LpqC Poly(3-hydroxybutyrate) depolymerase [Seconda | 97.98 | |
| PF05705 | 240 | DUF829: Eukaryotic protein of unknown function (DU | 97.96 | |
| COG1075 | 336 | LipA Predicted acetyltransferases and hydrolases w | 97.94 | |
| PLN02606 | 306 | palmitoyl-protein thioesterase | 97.92 | |
| PF12715 | 390 | Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8 | 97.9 | |
| COG3150 | 191 | Predicted esterase [General function prediction on | 97.85 | |
| PF00756 | 251 | Esterase: Putative esterase; InterPro: IPR000801 T | 97.83 | |
| PF10340 | 374 | DUF2424: Protein of unknown function (DUF2424); In | 97.78 | |
| PF05577 | 434 | Peptidase_S28: Serine carboxypeptidase S28; InterP | 97.71 | |
| KOG3724 | 973 | consensus Negative regulator of COPII vesicle form | 97.61 | |
| PF02089 | 279 | Palm_thioest: Palmitoyl protein thioesterase; Inte | 97.55 | |
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 97.54 | |
| COG2936 | 563 | Predicted acyl esterases [General function predict | 97.51 | |
| KOG1551 | 371 | consensus Uncharacterized conserved protein [Funct | 97.5 | |
| KOG2237 | 712 | consensus Predicted serine protease [Posttranslati | 97.38 | |
| PF12048 | 310 | DUF3530: Protein of unknown function (DUF3530); In | 97.36 | |
| PLN02633 | 314 | palmitoyl protein thioesterase family protein | 97.35 | |
| PF08386 | 103 | Abhydrolase_4: TAP-like protein; InterPro: IPR0135 | 97.33 | |
| PF02450 | 389 | LCAT: Lecithin:cholesterol acyltransferase; InterP | 97.3 | |
| KOG1282 | 454 | consensus Serine carboxypeptidases (lysosomal cath | 97.3 | |
| PF11144 | 403 | DUF2920: Protein of unknown function (DUF2920); In | 97.27 | |
| KOG3101 | 283 | consensus Esterase D [General function prediction | 97.22 | |
| cd00741 | 153 | Lipase Lipase. Lipases are esterases that can hydr | 97.2 | |
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 97.17 | |
| PF10142 | 367 | PhoPQ_related: PhoPQ-activated pathogenicity-relat | 97.15 | |
| KOG2183 | 492 | consensus Prolylcarboxypeptidase (angiotensinase C | 97.09 | |
| cd00312 | 493 | Esterase_lipase Esterases and lipases (includes fu | 96.99 | |
| COG1073 | 299 | Hydrolases of the alpha/beta superfamily [General | 96.74 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 96.7 | |
| PF06259 | 177 | Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR | 96.68 | |
| PF07082 | 250 | DUF1350: Protein of unknown function (DUF1350); In | 96.67 | |
| KOG2541 | 296 | consensus Palmitoyl protein thioesterase [Lipid tr | 96.66 | |
| cd00519 | 229 | Lipase_3 Lipase (class 3). Lipases are esterases t | 96.42 | |
| PF01764 | 140 | Lipase_3: Lipase (class 3); InterPro: IPR002921 Tr | 96.42 | |
| KOG2182 | 514 | consensus Hydrolytic enzymes of the alpha/beta hyd | 96.29 | |
| COG2819 | 264 | Predicted hydrolase of the alpha/beta superfamily | 96.21 | |
| PF01083 | 179 | Cutinase: Cutinase; InterPro: IPR000675 Aerial pla | 96.13 | |
| KOG3967 | 297 | consensus Uncharacterized conserved protein [Funct | 95.96 | |
| KOG2369 | 473 | consensus Lecithin:cholesterol acyltransferase (LC | 95.93 | |
| COG1505 | 648 | Serine proteases of the peptidase family S9A [Amin | 95.91 | |
| COG0627 | 316 | Predicted esterase [General function prediction on | 95.81 | |
| PLN02517 | 642 | phosphatidylcholine-sterol O-acyltransferase | 95.75 | |
| PF11187 | 224 | DUF2974: Protein of unknown function (DUF2974); In | 95.7 | |
| COG2272 | 491 | PnbA Carboxylesterase type B [Lipid metabolism] | 95.36 | |
| PLN02209 | 437 | serine carboxypeptidase | 95.35 | |
| COG3946 | 456 | VirJ Type IV secretory pathway, VirJ component [In | 95.34 | |
| PLN02162 | 475 | triacylglycerol lipase | 94.99 | |
| PLN02454 | 414 | triacylglycerol lipase | 94.91 | |
| PLN00413 | 479 | triacylglycerol lipase | 94.63 | |
| PLN02310 | 405 | triacylglycerol lipase | 94.43 | |
| PLN02571 | 413 | triacylglycerol lipase | 94.03 | |
| PLN02934 | 515 | triacylglycerol lipase | 93.82 | |
| PF06441 | 112 | EHN: Epoxide hydrolase N terminus; InterPro: IPR01 | 93.66 | |
| PLN03037 | 525 | lipase class 3 family protein; Provisional | 93.62 | |
| COG2830 | 214 | Uncharacterized protein conserved in bacteria [Fun | 93.51 | |
| PF11288 | 207 | DUF3089: Protein of unknown function (DUF3089); In | 93.39 | |
| PF05277 | 345 | DUF726: Protein of unknown function (DUF726); Inte | 93.39 | |
| PF04083 | 63 | Abhydro_lipase: Partial alpha/beta-hydrolase lipas | 93.32 | |
| PLN02408 | 365 | phospholipase A1 | 93.27 | |
| PF00135 | 535 | COesterase: Carboxylesterase family The prints ent | 93.25 | |
| PLN02847 | 633 | triacylglycerol lipase | 92.68 | |
| PLN02324 | 415 | triacylglycerol lipase | 92.54 | |
| COG2939 | 498 | Carboxypeptidase C (cathepsin A) [Amino acid trans | 92.36 | |
| PLN02802 | 509 | triacylglycerol lipase | 91.66 | |
| PLN02753 | 531 | triacylglycerol lipase | 91.65 | |
| KOG1283 | 414 | consensus Serine carboxypeptidases [Posttranslatio | 91.15 | |
| PLN02761 | 527 | lipase class 3 family protein | 91.1 | |
| PLN02719 | 518 | triacylglycerol lipase | 90.92 | |
| KOG4372 | 405 | consensus Predicted alpha/beta hydrolase [General | 90.44 | |
| TIGR03712 | 511 | acc_sec_asp2 accessory Sec system protein Asp2. Th | 90.33 | |
| PLN02213 | 319 | sinapoylglucose-malate O-sinapoyltransferase/ carb | 89.74 | |
| KOG4569 | 336 | consensus Predicted lipase [Lipid transport and me | 89.08 | |
| COG2382 | 299 | Fes Enterochelin esterase and related enzymes [Ino | 88.72 | |
| KOG4540 | 425 | consensus Putative lipase essential for disintegra | 88.45 | |
| COG5153 | 425 | CVT17 Putative lipase essential for disintegration | 88.45 | |
| KOG1516 | 545 | consensus Carboxylesterase and related proteins [G | 85.34 | |
| COG4947 | 227 | Uncharacterized protein conserved in bacteria [Fun | 85.33 | |
| COG4553 | 415 | DepA Poly-beta-hydroxyalkanoate depolymerase [Lipi | 85.04 | |
| PF05576 | 448 | Peptidase_S37: PS-10 peptidase S37; InterPro: IPR0 | 83.39 | |
| COG4287 | 507 | PqaA PhoPQ-activated pathogenicity-related protein | 82.33 | |
| KOG2521 | 350 | consensus Uncharacterized conserved protein [Funct | 82.22 | |
| PF08237 | 225 | PE-PPE: PE-PPE domain; InterPro: IPR013228 The hum | 81.96 |
| >PLN02824 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-27 Score=231.42 Aligned_cols=255 Identities=18% Similarity=0.146 Sum_probs=159.6
Q ss_pred eeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCC--------------hHHHHHHHHHHH
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP--------------FEGLVKFVEETV 232 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss--------------~~~~~~dl~~~i 232 (468)
++|...|. ++|+|||+||++++...|..+++.|++.|+|+++|+||||.|+ ++++++++.+++
T Consensus 20 i~y~~~G~---~~~~vlllHG~~~~~~~w~~~~~~L~~~~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l 96 (294)
T PLN02824 20 IRYQRAGT---SGPALVLVHGFGGNADHWRKNTPVLAKSHRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFC 96 (294)
T ss_pred EEEEEcCC---CCCeEEEECCCCCChhHHHHHHHHHHhCCeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHH
Confidence 45666664 2579999999999999999999999888999999999999873 578899999999
Q ss_pred HHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCC-CCcCcc-hHHHhhCchhHHh-hH-HHHhhh
Q 012190 233 RREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGR-SQLQPL-FPILKAMPDELHC-AV-PYLLSY 308 (468)
Q Consensus 233 ~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~-~~~~~~-~~~~~~~~~~~~~-~~-~~~~~~ 308 (468)
+++. .++++|+||||||.+++.+|.++|++|+++|++++...... ...... .+....+...+.. .. ..++..
T Consensus 97 ~~l~----~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (294)
T PLN02824 97 SDVV----GDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKS 172 (294)
T ss_pred HHhc----CCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHHHHHHHh
Confidence 9853 46899999999999999999999999999999998542111 100000 0111100000000 00 000000
Q ss_pred hcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHh-HHHhhhcccCCceEEEEEe
Q 012190 309 VMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSAS-AYANSRLHAVKAEVLVLAS 387 (468)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~l~~i~~PvLlI~G 387 (468)
............... .+.....+...+.+.. ..............+.... ......+.++++|+|+|+|
T Consensus 173 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G 242 (294)
T PLN02824 173 VATPETVKNILCQCY-HDDSAVTDELVEAILR---------PGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWG 242 (294)
T ss_pred hcCHHHHHHHHHHhc-cChhhccHHHHHHHHh---------ccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEEEe
Confidence 000000000000000 0000000111110000 0000111111111111000 0113456889999999999
Q ss_pred CCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 388 GKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 388 ~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
++|.+++.+ ..+.+.+..+++++++++++||++++|+|+++++.|. +|+.+
T Consensus 243 ~~D~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~~ 293 (294)
T PLN02824 243 EKDPWEPVE-LGRAYANFDAVEDFIVLPGVGHCPQDEAPELVNPLIE--SFVAR 293 (294)
T ss_pred cCCCCCChH-HHHHHHhcCCccceEEeCCCCCChhhhCHHHHHHHHH--HHHhc
Confidence 999999998 6888888888899999999999999999999999999 66654
|
|
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.1e-28 Score=228.00 Aligned_cols=242 Identities=16% Similarity=0.200 Sum_probs=151.1
Q ss_pred eecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCC------hHHHHHHHHHHHHHHhhcCCC
Q 012190 168 CPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP------FEGLVKFVEETVRREHASSPE 241 (468)
Q Consensus 168 ~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss------~~~~~~dl~~~i~~~~~~~~~ 241 (468)
+|...|+ +.|+|||+||++++...|..+++.|.+.|+|+++|+||||.|+ ++++++++. + ...
T Consensus 5 ~y~~~G~---g~~~ivllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~l~----~----~~~ 73 (256)
T PRK10349 5 WWQTKGQ---GNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFGALSLADMAEAVL----Q----QAP 73 (256)
T ss_pred chhhcCC---CCCeEEEECCCCCChhHHHHHHHHHhcCCEEEEecCCCCCCCCCCCCCCHHHHHHHHH----h----cCC
Confidence 4555665 3457999999999999999999999888999999999999883 444444433 2 234
Q ss_pred CcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCC-CcCcch-HHHhhCchhHHhhHHHHhhhhcCChhhHHHH
Q 012190 242 KPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRS-QLQPLF-PILKAMPDELHCAVPYLLSYVMGDPIKMAMV 319 (468)
Q Consensus 242 ~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (468)
++++|+||||||.+|+.+|.++|++++++|++++....... .+.... .........+..........+.. .
T Consensus 74 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--- 146 (256)
T PRK10349 74 DKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLA----L--- 146 (256)
T ss_pred CCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHH----H---
Confidence 68999999999999999999999999999999885443211 111100 00000000000000000000000 0
Q ss_pred hhccCCChhHHhhhhhhhcchhcchhhhhhccCC-cchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHH
Q 012190 320 NIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIP-KDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDE 398 (468)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~ 398 (468)
..............+...+. ....+ ...+......+.. ......+.++++|+|+|+|++|.++|.+ .
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~--~~~~~~l~~i~~P~lii~G~~D~~~~~~-~ 214 (256)
T PRK10349 147 QTMGTETARQDARALKKTVL---------ALPMPEVDVLNGGLEILKT--VDLRQPLQNVSMPFLRLYGYLDGLVPRK-V 214 (256)
T ss_pred HHccCchHHHHHHHHHHHhh---------ccCCCcHHHHHHHHHHHHh--CccHHHHhhcCCCeEEEecCCCccCCHH-H
Confidence 00000000000001100000 00000 0111111111111 1234567889999999999999999998 6
Q ss_pred HHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 399 AKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 399 ~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
.+.+.+.++++++++++++||++++|+|+.|++.|. +|-+|
T Consensus 215 ~~~~~~~i~~~~~~~i~~~gH~~~~e~p~~f~~~l~--~~~~~ 255 (256)
T PRK10349 215 VPMLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLV--ALKQR 255 (256)
T ss_pred HHHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHH--HHhcc
Confidence 899999999999999999999999999999999999 55443
|
|
| >TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.2e-27 Score=226.85 Aligned_cols=239 Identities=22% Similarity=0.243 Sum_probs=156.8
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC-------ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeC
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-------s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS 250 (468)
++++|||+||++++...|.++++.|.+.|+|+++|+||||.| +++++++++.++++++. .++++|+|||
T Consensus 24 ~~~plvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~~l~----~~~~~LvG~S 99 (276)
T TIGR02240 24 GLTPLLIFNGIGANLELVFPFIEALDPDLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLDYLD----YGQVNAIGVS 99 (276)
T ss_pred CCCcEEEEeCCCcchHHHHHHHHHhccCceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhC----cCceEEEEEC
Confidence 457899999999999999999999988999999999999998 37899999999999853 4589999999
Q ss_pred hhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHH
Q 012190 251 FGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIK 330 (468)
Q Consensus 251 ~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (468)
|||.+++.+|.++|++|+++|+++++.......... ........... .. ....................+. .
T Consensus 100 ~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~--~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~-~ 171 (276)
T TIGR02240 100 WGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKP--KVLMMMASPRR-YI----QPSHGIHIAPDIYGGAFRRDPE-L 171 (276)
T ss_pred HHHHHHHHHHHHCHHHhhheEEeccCCccccCCCch--hHHHHhcCchh-hh----ccccccchhhhhccceeeccch-h
Confidence 999999999999999999999999876432111100 00000000000 00 0000000000000000000000 0
Q ss_pred hhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcE
Q 012190 331 LEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCI 410 (468)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~ 410 (468)
....... ... .......+. ............+.++++|+|+|+|++|++++++ ..+.+.+.+++++
T Consensus 172 ~~~~~~~----------~~~-~~~~~~~~~--~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~-~~~~l~~~~~~~~ 237 (276)
T TIGR02240 172 AMAHASK----------VRS-GGKLGYYWQ--LFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLI-NMRLLAWRIPNAE 237 (276)
T ss_pred hhhhhhh----------ccc-CCCchHHHH--HHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHH-HHHHHHHhCCCCE
Confidence 0000000 000 000001111 1111111112456889999999999999999999 7999999999999
Q ss_pred EEEeCCCCccccccCcHHHHHHHHhcCcccccCCC
Q 012190 411 VRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSRKL 445 (468)
Q Consensus 411 ~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r~~~~ 445 (468)
++++++ ||++++|+|+++++.|. +|+.+..+.
T Consensus 238 ~~~i~~-gH~~~~e~p~~~~~~i~--~fl~~~~~~ 269 (276)
T TIGR02240 238 LHIIDD-GHLFLITRAEAVAPIIM--KFLAEERQR 269 (276)
T ss_pred EEEEcC-CCchhhccHHHHHHHHH--HHHHHhhhh
Confidence 999985 99999999999999999 677776554
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. |
| >PRK03592 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.6e-27 Score=226.90 Aligned_cols=255 Identities=13% Similarity=0.091 Sum_probs=156.1
Q ss_pred eeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC-------ChHHHHHHHHHHHHHHhhcC
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHASS 239 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-------s~~~~~~dl~~~i~~~~~~~ 239 (468)
++|...|. +|+|||+||++++...|..+++.|.+.++|+++|+||||.| +++++++++.++++++
T Consensus 19 i~y~~~G~----g~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~l---- 90 (295)
T PRK03592 19 MAYIETGE----GDPIVFLHGNPTSSYLWRNIIPHLAGLGRCLAPDLIGMGASDKPDIDYTFADHARYLDAWFDAL---- 90 (295)
T ss_pred EEEEEeCC----CCEEEEECCCCCCHHHHHHHHHHHhhCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----
Confidence 45666665 67999999999999999999999988889999999999998 4788999999999985
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCC-CcCc-chHHHhhCchhH-Hh-hH---HHHhhhhcCC
Q 012190 240 PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRS-QLQP-LFPILKAMPDEL-HC-AV---PYLLSYVMGD 312 (468)
Q Consensus 240 ~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~-~~~~-~~~~~~~~~~~~-~~-~~---~~~~~~~~~~ 312 (468)
..++++++||||||.+|+.+|.++|++|+++|++++....... .... .......+.... .. .. ..........
T Consensus 91 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (295)
T PRK03592 91 GLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEMVLEENVFIERVLPG 170 (295)
T ss_pred CCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccccccchhhHHhhcccC
Confidence 3458999999999999999999999999999999984322110 0000 000000000000 00 00 0000000000
Q ss_pred hhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhh---hccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCC
Q 012190 313 PIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVM---SDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGK 389 (468)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~ 389 (468)
......+++. ...+...+... ...... .............. .........+.++++|+|+|+|++
T Consensus 171 -------~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~i~~P~lii~G~~ 238 (295)
T PRK03592 171 -------SILRPLSDEE-MAVYRRPFPTP-ESRRPTLSWPRELPIDGEPADVV---ALVEEYAQWLATSDVPKLLINAEP 238 (295)
T ss_pred -------cccccCCHHH-HHHHHhhcCCc-hhhhhhhhhhhhcCCCCcchhhH---hhhhHhHHHhccCCCCeEEEeccC
Confidence 0000011110 01111100000 000000 00000000000000 000112345688999999999999
Q ss_pred CCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccccC
Q 012190 390 DNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSR 443 (468)
Q Consensus 390 D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r~~ 443 (468)
|.++++....+.+.+..+++++++++++||++++|+|+++++.|. .|+.+..
T Consensus 239 D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~--~fl~~~~ 290 (295)
T PRK03592 239 GAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAIA--AWLRRLR 290 (295)
T ss_pred CcccCcHHHHHHHHHhhhhcceeeccCcchhhhhcCHHHHHHHHH--HHHHHhc
Confidence 999965523344455678899999999999999999999999999 6776543
|
|
| >PRK00870 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.1e-26 Score=222.95 Aligned_cols=246 Identities=18% Similarity=0.174 Sum_probs=155.6
Q ss_pred eeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhc-CCeEEEEecCCCCCCCC---------hHHHHHHHHHHHHHHh
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVYDRTP---------FEGLVKFVEETVRREH 236 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~-~~~~V~~~D~~G~G~Ss---------~~~~~~dl~~~i~~~~ 236 (468)
++|.+.|.+ ++|+|||+||++++...|..+++.|. ++|+|+++|+||||.|+ ++++++++.++++++
T Consensus 36 i~y~~~G~~--~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l- 112 (302)
T PRK00870 36 MHYVDEGPA--DGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQL- 112 (302)
T ss_pred EEEEecCCC--CCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHc-
Confidence 567777753 46899999999999999999999996 57999999999999883 578889999999874
Q ss_pred hcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHH-hhHHHHhhhhcCChhh
Q 012190 237 ASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELH-CAVPYLLSYVMGDPIK 315 (468)
Q Consensus 237 ~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 315 (468)
+.++++|+||||||.+|+.+|.++|++|.++|++++........................ ......+.....
T Consensus 113 ---~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 185 (302)
T PRK00870 113 ---DLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAWRAFSQYSPVLPVGRLVNGGTV---- 185 (302)
T ss_pred ---CCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhhhcccccCchhhHHHHhhcccc----
Confidence 455899999999999999999999999999999987532211100000000000000000 000000000000
Q ss_pred HHHHhhccCCChhHHhhhhhhhcch-----hcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCC
Q 012190 316 MAMVNIENRLPPRIKLEQLSNNLPA-----LLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKD 390 (468)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D 390 (468)
.....+ ....+...... .......+........... ........+.++++|+++|+|++|
T Consensus 186 -------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~i~~P~lii~G~~D 250 (302)
T PRK00870 186 -------RDLSDA-VRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVA-------ANRAAWAVLERWDKPFLTAFSDSD 250 (302)
T ss_pred -------ccCCHH-HHHHhhcccCChhhhcchhhhhhcCCCCCCCcchH-------HHHHHHHhhhcCCCceEEEecCCC
Confidence 000000 01111000000 0000000000000000000 011112456889999999999999
Q ss_pred CCCCcHHHHHHHHHhCCCcE---EEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 391 NMLPSEDEAKRLNNSLQNCI---VRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 391 ~~v~~~~~~~~l~~~l~~~~---~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
.+++.. . +.+.+.+++++ +++++++||++++|+|+++++.|. .|+++
T Consensus 251 ~~~~~~-~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~--~fl~~ 300 (302)
T PRK00870 251 PITGGG-D-AILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVL--EFIRA 300 (302)
T ss_pred CcccCc-h-HHHHhhcccccccceeeecCCCccchhhChHHHHHHHH--HHHhc
Confidence 999987 4 88999998776 889999999999999999999999 55543
|
|
| >TIGR03611 RutD pyrimidine utilization protein D | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-26 Score=218.53 Aligned_cols=243 Identities=19% Similarity=0.213 Sum_probs=155.5
Q ss_pred ecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC--------ChHHHHHHHHHHHHHHhhcCC
Q 012190 169 PVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSP 240 (468)
Q Consensus 169 y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S--------s~~~~~~dl~~~i~~~~~~~~ 240 (468)
|...|.+.+++|+|||+||++++...|...++.|.++|+|+++|+||||.| +++++++++.++++++ .
T Consensus 3 ~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~----~ 78 (257)
T TIGR03611 3 YELHGPPDADAPVVVLSSGLGGSGSYWAPQLDVLTQRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL----N 78 (257)
T ss_pred EEEecCCCCCCCEEEEEcCCCcchhHHHHHHHHHHhccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh----C
Confidence 344454444688999999999999999999999988999999999999988 4788899999999874 3
Q ss_pred CCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHh
Q 012190 241 EKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVN 320 (468)
Q Consensus 241 ~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (468)
.++++++||||||.+|+.+|+++|+.++++|++++......... ...... ..++..............
T Consensus 79 ~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~----~~~~~~--------~~~~~~~~~~~~~~~~~~ 146 (257)
T TIGR03611 79 IERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTR----RCFDVR--------IALLQHAGPEAYVHAQAL 146 (257)
T ss_pred CCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHH----HHHHHH--------HHHHhccCcchhhhhhhh
Confidence 45899999999999999999999999999999987543211100 000000 000000000000000000
Q ss_pred hccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHH
Q 012190 321 IENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAK 400 (468)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~ 400 (468)
. ..+. .........+.. ..............+......+... .....+..+++|+++++|++|.++|++ ..+
T Consensus 147 ~--~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~P~l~i~g~~D~~~~~~-~~~ 218 (257)
T TIGR03611 147 F--LYPA-DWISENAARLAA--DEAHALAHFPGKANVLRRINALEAF--DVSARLDRIQHPVLLIANRDDMLVPYT-QSL 218 (257)
T ss_pred h--hccc-cHhhccchhhhh--hhhhcccccCccHHHHHHHHHHHcC--CcHHHhcccCccEEEEecCcCcccCHH-HHH
Confidence 0 0000 000000000000 0000000000111111111111111 122456788999999999999999999 789
Q ss_pred HHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHh
Q 012190 401 RLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (468)
Q Consensus 401 ~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~ 435 (468)
.+.+.+++++++.++++||++++++|+++++.|.+
T Consensus 219 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~ 253 (257)
T TIGR03611 219 RLAAALPNAQLKLLPYGGHASNVTDPETFNRALLD 253 (257)
T ss_pred HHHHhcCCceEEEECCCCCCccccCHHHHHHHHHH
Confidence 99999999999999999999999999999999993
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. |
| >PLN02679 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.6e-26 Score=226.77 Aligned_cols=257 Identities=14% Similarity=0.154 Sum_probs=155.5
Q ss_pred eeecCCCCC--CCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC--------ChHHHHHHHHHHHHHHh
Q 012190 167 FCPVDCGRP--LKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREH 236 (468)
Q Consensus 167 ~~y~~~g~~--~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S--------s~~~~~~dl~~~i~~~~ 236 (468)
++|...|+. .+++|+|||+||++++...|.+++..|.++|+|+++|+||||.| +++++++++.++++++
T Consensus 74 i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l- 152 (360)
T PLN02679 74 INYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLAKNYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEV- 152 (360)
T ss_pred EEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHh-
Confidence 466666641 11358999999999999999999999988999999999999987 3578899999999874
Q ss_pred hcCCCCcEEEEEeChhHHHHHHHHHh-CCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchh--HHh------hHHHHhh
Q 012190 237 ASSPEKPIYLVGDSFGGCLALAVAAR-NPTIDLILILSNPATSFGRSQLQPLFPILKAMPDE--LHC------AVPYLLS 307 (468)
Q Consensus 237 ~~~~~~~i~LvGhS~GG~ia~~~a~~-~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~--~~~------~~~~~~~ 307 (468)
..++++|+||||||.+++.+|++ +|++|+++|+++++..................+.. ... ....++.
T Consensus 153 ---~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (360)
T PLN02679 153 ---VQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFN 229 (360)
T ss_pred ---cCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHH
Confidence 34599999999999999988874 79999999999986533211110000000000000 000 0000000
Q ss_pred hhcCCh-hhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCC-cchhHHHHHHHHH-HhHHHhhhcccCCceEEE
Q 012190 308 YVMGDP-IKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIP-KDTLLWKLKLLKS-ASAYANSRLHAVKAEVLV 384 (468)
Q Consensus 308 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~-~~~~~~~~l~~i~~PvLl 384 (468)
...... +.......... .....+.+.+.+. .... ............. ........+.++++|+|+
T Consensus 230 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLi 297 (360)
T PLN02679 230 RVKQRDNLKNILLSVYGN--KEAVDDELVEIIR----------GPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILV 297 (360)
T ss_pred HhcCHHHHHHHHHHhccC--cccCCHHHHHHHH----------hhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEE
Confidence 000000 00000000000 0000000000000 0000 0111111111110 001112456789999999
Q ss_pred EEeCCCCCCCcHH----HHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 385 LASGKDNMLPSED----EAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 385 I~G~~D~~v~~~~----~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
|+|++|.++|+.. ..+.+.+.++++++++++++||++++|+|+++++.|. .|+.+
T Consensus 298 i~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~--~FL~~ 356 (360)
T PLN02679 298 LWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRPDLVHEKLL--PWLAQ 356 (360)
T ss_pred EEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCHHHHHHHHH--HHHHh
Confidence 9999999998861 1245667789999999999999999999999999999 56654
|
|
| >PLN02578 hydrolase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-25 Score=223.56 Aligned_cols=248 Identities=16% Similarity=0.171 Sum_probs=156.6
Q ss_pred eeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCC-------hHHHHHHHHHHHHHHhhcC
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP-------FEGLVKFVEETVRREHASS 239 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss-------~~~~~~dl~~~i~~~~~~~ 239 (468)
++|...|+ +|+|||+||++++...|..+++.|+++|+|+++|+||||.|+ .+++++++.++++.+.
T Consensus 78 i~Y~~~g~----g~~vvliHG~~~~~~~w~~~~~~l~~~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~~--- 150 (354)
T PLN02578 78 IHYVVQGE----GLPIVLIHGFGASAFHWRYNIPELAKKYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEVV--- 150 (354)
T ss_pred EEEEEcCC----CCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHHhc---
Confidence 46666664 678999999999999999999999889999999999999983 6778889999998853
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcch------HHHhh-CchhHHhhHHHHhh----h
Q 012190 240 PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLF------PILKA-MPDELHCAVPYLLS----Y 308 (468)
Q Consensus 240 ~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~~~~----~ 308 (468)
.++++++||||||.+++.+|.++|++++++|+++++..+......... ..... .............. .
T Consensus 151 -~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (354)
T PLN02578 151 -KEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLFW 229 (354)
T ss_pred -cCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHHHHHHH
Confidence 458999999999999999999999999999999986543322110000 00000 00000000000000 0
Q ss_pred hcCChhhHHH--HhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHH-----hHHHhhhcccCCce
Q 012190 309 VMGDPIKMAM--VNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSA-----SAYANSRLHAVKAE 381 (468)
Q Consensus 309 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~l~~i~~P 381 (468)
....+..... ...... .....+.+.+.+. ...............+... .....+.+.++++|
T Consensus 230 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 298 (354)
T PLN02578 230 QAKQPSRIESVLKSVYKD--KSNVDDYLVESIT---------EPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCP 298 (354)
T ss_pred HhcCHHHHHHHHHHhcCC--cccCCHHHHHHHH---------hcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCC
Confidence 0000000000 000000 0000000000000 0000111100001111110 11123456889999
Q ss_pred EEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHh
Q 012190 382 VLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (468)
Q Consensus 382 vLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~ 435 (468)
+++|+|++|.+++.+ ..+.+.+.+++++++++ ++||+++.|+|+++++.|.+
T Consensus 299 vLiI~G~~D~~v~~~-~~~~l~~~~p~a~l~~i-~~GH~~~~e~p~~~~~~I~~ 350 (354)
T PLN02578 299 LLLLWGDLDPWVGPA-KAEKIKAFYPDTTLVNL-QAGHCPHDEVPEQVNKALLE 350 (354)
T ss_pred EEEEEeCCCCCCCHH-HHHHHHHhCCCCEEEEe-CCCCCccccCHHHHHHHHHH
Confidence 999999999999999 79999999999999999 58999999999999999994
|
|
| >PRK03204 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-25 Score=216.56 Aligned_cols=244 Identities=13% Similarity=0.155 Sum_probs=152.5
Q ss_pred CCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCC--------hHHHHHHHH
Q 012190 158 KPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP--------FEGLVKFVE 229 (468)
Q Consensus 158 ~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss--------~~~~~~dl~ 229 (468)
..+|.. ++|...|+ +|+|||+||++.+...|..+++.|.++|+|+++|+||||.|+ ++++++++.
T Consensus 20 ~~~~~~---i~y~~~G~----~~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~ 92 (286)
T PRK03204 20 DSSRGR---IHYIDEGT----GPPILLCHGNPTWSFLYRDIIVALRDRFRCVAPDYLGFGLSERPSGFGYQIDEHARVIG 92 (286)
T ss_pred EcCCcE---EEEEECCC----CCEEEEECCCCccHHHHHHHHHHHhCCcEEEEECCCCCCCCCCCCccccCHHHHHHHHH
Confidence 334444 46777775 678999999999999999999999888999999999999873 577888888
Q ss_pred HHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhh-Cch-hHHh-hH--HH
Q 012190 230 ETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKA-MPD-ELHC-AV--PY 304 (468)
Q Consensus 230 ~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~-~~~-~~~~-~~--~~ 304 (468)
++++++ +.++++++||||||.+++.+|.++|++|+++|++++..... ... ....... ... .... .. ..
T Consensus 93 ~~~~~~----~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~ 165 (286)
T PRK03204 93 EFVDHL----GLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPA-DTL--AMKAFSRVMSSPPVQYAILRRNF 165 (286)
T ss_pred HHHHHh----CCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCC-Cch--hHHHHHHHhccccchhhhhhhhH
Confidence 888774 45689999999999999999999999999999988754211 000 0000000 000 0000 00 00
Q ss_pred HhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHH----HHH---hHHHhhhcc-
Q 012190 305 LLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLL----KSA---SAYANSRLH- 376 (468)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~---~~~~~~~l~- 376 (468)
....+.... .....+... ...+.. .............+ ... .......+.
T Consensus 166 ~~~~~~~~~-------~~~~~~~~~-~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (286)
T PRK03204 166 FVERLIPAG-------TEHRPSSAV-MAHYRA--------------VQPNAAARRGVAEMPKQILAARPLLARLAREVPA 223 (286)
T ss_pred HHHHhcccc-------ccCCCCHHH-HHHhcC--------------CCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhh
Confidence 000000000 000111100 000000 00000000000000 000 000001111
Q ss_pred -cCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcc
Q 012190 377 -AVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKY 439 (468)
Q Consensus 377 -~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~ 439 (468)
.+++|+|+|+|++|.++++....+.+.+.+|++++++++++||++++|+|+++++.|. +|+
T Consensus 224 ~~~~~PtliI~G~~D~~~~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~e~Pe~~~~~i~--~~~ 285 (286)
T PRK03204 224 TLGTKPTLLVWGMKDVAFRPKTILPRLRATFPDHVLVELPNAKHFIQEDAPDRIAAAII--ERF 285 (286)
T ss_pred hcCCCCeEEEecCCCcccCcHHHHHHHHHhcCCCeEEEcCCCcccccccCHHHHHHHHH--Hhc
Confidence 2389999999999999876524688999999999999999999999999999999999 453
|
|
| >TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.5e-26 Score=218.21 Aligned_cols=250 Identities=18% Similarity=0.150 Sum_probs=154.1
Q ss_pred cCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHH---hHhhh-cCCeEEEEecCCCCCCCChH--------HH
Q 012190 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLIL---HHKPL-GKAFEVRCLHIPVYDRTPFE--------GL 224 (468)
Q Consensus 157 ~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~---~~~~L-~~~~~V~~~D~~G~G~Ss~~--------~~ 224 (468)
++.+|....-++|...|+ +|+|||+||++++...|.. .+..+ ..+|+|+++|+||||.|+.. .+
T Consensus 12 ~~~~~~~~~~~~y~~~g~----~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 87 (282)
T TIGR03343 12 INEKGLSNFRIHYNEAGN----GEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVN 87 (282)
T ss_pred cccccccceeEEEEecCC----CCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchh
Confidence 344555444467777665 6789999999988877754 34455 56799999999999999521 34
Q ss_pred HHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCC--CcC--cchHHHhhCchhHHh
Q 012190 225 VKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRS--QLQ--PLFPILKAMPDELHC 300 (468)
Q Consensus 225 ~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~--~~~--~~~~~~~~~~~~~~~ 300 (468)
++++.++++. ...++++++||||||.+++.+|.++|++++++|++++....... ... ...............
T Consensus 88 ~~~l~~~l~~----l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (282)
T TIGR03343 88 ARAVKGLMDA----LDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYE 163 (282)
T ss_pred HHHHHHHHHH----cCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHH
Confidence 6788888887 44569999999999999999999999999999999975321100 000 000000000000000
Q ss_pred hHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHH---HHhHHHhhhccc
Q 012190 301 AVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLK---SASAYANSRLHA 377 (468)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~l~~ 377 (468)
.....+.....++ ...+.. ..+....... . . ............ .........+.+
T Consensus 164 ~~~~~~~~~~~~~---------~~~~~~-~~~~~~~~~~---~--------~-~~~~~~~~~~~~~~~~~~~~~~~~l~~ 221 (282)
T TIGR03343 164 TLKQMLNVFLFDQ---------SLITEE-LLQGRWENIQ---R--------Q-PEHLKNFLISSQKAPLSTWDVTARLGE 221 (282)
T ss_pred HHHHHHhhCccCc---------ccCcHH-HHHhHHHHhh---c--------C-HHHHHHHHHhccccccccchHHHHHhh
Confidence 0000000000000 000000 0000000000 0 0 000000000000 000111345688
Q ss_pred CCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcc
Q 012190 378 VKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKY 439 (468)
Q Consensus 378 i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~ 439 (468)
+++|+|+|+|++|.+++++ ..+.+.+.++++++++++++||++++|+|+.+++.|. .|+
T Consensus 222 i~~Pvlli~G~~D~~v~~~-~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~i~--~fl 280 (282)
T TIGR03343 222 IKAKTLVTWGRDDRFVPLD-HGLKLLWNMPDAQLHVFSRCGHWAQWEHADAFNRLVI--DFL 280 (282)
T ss_pred CCCCEEEEEccCCCcCCch-hHHHHHHhCCCCEEEEeCCCCcCCcccCHHHHHHHHH--HHh
Confidence 9999999999999999998 7999999999999999999999999999999999999 554
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. |
| >PLN02965 Probable pheophorbidase | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.5e-26 Score=215.20 Aligned_cols=229 Identities=13% Similarity=0.111 Sum_probs=147.4
Q ss_pred eEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC--------ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeCh
Q 012190 181 TLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSPEKPIYLVGDSF 251 (468)
Q Consensus 181 ~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S--------s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~ 251 (468)
.|||+||++.+...|..+++.| ..+|+|+++|+||||.| +++++++|+.++++.+. ..++++|+||||
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~---~~~~~~lvGhSm 81 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLP---PDHKVILVGHSI 81 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcC---CCCCEEEEecCc
Confidence 5999999999999999999999 77899999999999987 36888999999999842 125899999999
Q ss_pred hHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChh-------hHHHHhhccC
Q 012190 252 GGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPI-------KMAMVNIENR 324 (468)
Q Consensus 252 GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 324 (468)
||.+++.+|.++|++|.++|++++......... .......... ....+...+......+. ..........
T Consensus 82 GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (255)
T PLN02965 82 GGGSVTEALCKFTDKISMAIYVAAAMVKPGSII--SPRLKNVMEG-TEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYYNQ 158 (255)
T ss_pred chHHHHHHHHhCchheeEEEEEccccCCCCCCc--cHHHHhhhhc-cccceeeeeccCCCCCcchhhcCHHHHHHHHhcC
Confidence 999999999999999999999998532111100 0000000000 00000000000000000 0000000000
Q ss_pred CChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHH
Q 012190 325 LPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNN 404 (468)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~ 404 (468)
..... ..... .......... .... ......+..+++|+++|+|++|.++|+. ..+.+.+
T Consensus 159 ~~~~~-~~~~~--------------~~~~~~~~~~-~~~~----~~~~~~~~~i~vP~lvi~g~~D~~~~~~-~~~~~~~ 217 (255)
T PLN02965 159 SPLED-YTLSS--------------KLLRPAPVRA-FQDL----DKLPPNPEAEKVPRVYIKTAKDNLFDPV-RQDVMVE 217 (255)
T ss_pred CCHHH-HHHHH--------------HhcCCCCCcc-hhhh----hhccchhhcCCCCEEEEEcCCCCCCCHH-HHHHHHH
Confidence 00000 00000 0000000000 0000 0111244578999999999999999999 7999999
Q ss_pred hCCCcEEEEeCCCCccccccCcHHHHHHHHhc
Q 012190 405 SLQNCIVRNFKDNGHTLLLEEGISLLTIIKGT 436 (468)
Q Consensus 405 ~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~ 436 (468)
.++++++++++++||++++|+|+++++.|.++
T Consensus 218 ~~~~a~~~~i~~~GH~~~~e~p~~v~~~l~~~ 249 (255)
T PLN02965 218 NWPPAQTYVLEDSDHSAFFSVPTTLFQYLLQA 249 (255)
T ss_pred hCCcceEEEecCCCCchhhcCHHHHHHHHHHH
Confidence 99999999999999999999999999999954
|
|
| >TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-25 Score=214.51 Aligned_cols=248 Identities=18% Similarity=0.204 Sum_probs=156.2
Q ss_pred eeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC--------ChHHHHHHHHHHHHHHhhc
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHAS 238 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S--------s~~~~~~dl~~~i~~~~~~ 238 (468)
++|.+.|. .++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++++.++++++
T Consensus 18 ~~~~~~g~--~~~~~vv~~hG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~~--- 92 (278)
T TIGR03056 18 WHVQDMGP--TAGPLLLLLHGTGASTHSWRDLMPPLARSFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAAE--- 92 (278)
T ss_pred EEEEecCC--CCCCeEEEEcCCCCCHHHHHHHHHHHhhCcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHHc---
Confidence 34555554 2468999999999999999999999988999999999999987 4788899999999874
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcC--ChhhH
Q 012190 239 SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMG--DPIKM 316 (468)
Q Consensus 239 ~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 316 (468)
..++++|+||||||.+++.+|.++|++++++|++++.............+........ ............. +....
T Consensus 93 -~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 170 (278)
T TIGR03056 93 -GLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLAC-NPFTPPMMSRGAADQQRVER 170 (278)
T ss_pred -CCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhh-cccchHHHHhhcccCcchhH
Confidence 3458899999999999999999999999999999886532111100000000000000 0000000000000 00000
Q ss_pred HHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHh-HHHhhhcccCCceEEEEEeCCCCCCCc
Q 012190 317 AMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSAS-AYANSRLHAVKAEVLVLASGKDNMLPS 395 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~l~~i~~PvLlI~G~~D~~v~~ 395 (468)
............ ....... .. ............+.... ......+.++++|+++|+|++|..+|+
T Consensus 171 ~~~~~~~~~~~~--~~~~~~~----------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~ 236 (278)
T TIGR03056 171 LIRDTGSLLDKA--GMTYYGR----------LI--RSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPP 236 (278)
T ss_pred Hhhccccccccc--hhhHHHH----------hh--cCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCH
Confidence 000000000000 0000000 00 00000000000000000 011245678899999999999999999
Q ss_pred HHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhc
Q 012190 396 EDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGT 436 (468)
Q Consensus 396 ~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~ 436 (468)
+ ..+.+.+.+++++++.++++||++++|+|+++++.|.+|
T Consensus 237 ~-~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f 276 (278)
T TIGR03056 237 D-ESKRAATRVPTATLHVVPGGGHLVHEEQADGVVGLILQA 276 (278)
T ss_pred H-HHHHHHHhccCCeEEEECCCCCcccccCHHHHHHHHHHH
Confidence 9 799999999999999999999999999999999999943
|
Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity. |
| >PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-25 Score=227.02 Aligned_cols=261 Identities=16% Similarity=0.178 Sum_probs=153.5
Q ss_pred eecCCCCCC-CCCCeEEEeCCCCCchhhHHH-hHhhhc----CCeEEEEecCCCCCCC--------ChHHHHHHHH-HHH
Q 012190 168 CPVDCGRPL-KGSPTLLFLPGIDGLGLGLIL-HHKPLG----KAFEVRCLHIPVYDRT--------PFEGLVKFVE-ETV 232 (468)
Q Consensus 168 ~y~~~g~~~-~~~p~lV~lHG~~~s~~~~~~-~~~~L~----~~~~V~~~D~~G~G~S--------s~~~~~~dl~-~~i 232 (468)
++...|.+. +.+|+|||+||++++...|.. +++.|. ++|+|+++|+||||.| +++++++++. .++
T Consensus 189 ~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a~~l~~~ll 268 (481)
T PLN03087 189 FVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLREHLEMIERSVL 268 (481)
T ss_pred EEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHHHHHHHHHHHH
Confidence 444444321 235799999999999999985 446654 6899999999999987 3677788874 677
Q ss_pred HHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhC-chh------HHhhHHHH
Q 012190 233 RREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAM-PDE------LHCAVPYL 305 (468)
Q Consensus 233 ~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~-~~~------~~~~~~~~ 305 (468)
+. .+.++++++||||||.+++.+|.++|++|+++|+++|+.................. +.. .......+
T Consensus 269 ~~----lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 344 (481)
T PLN03087 269 ER----YKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRVWPPIAFGASVACW 344 (481)
T ss_pred HH----cCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhcccccCCccccchhHHHH
Confidence 76 44569999999999999999999999999999999985433221110000000000 000 00000000
Q ss_pred hhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchh--cchhh-hhhccCCcchhHHHHHHHH-H----HhHHHhhhccc
Q 012190 306 LSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPAL--LPRLS-VMSDIIPKDTLLWKLKLLK-S----ASAYANSRLHA 377 (468)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~l~~~~~~~~-~----~~~~~~~~l~~ 377 (468)
+... ...... ...... ...+.+...+... ..... .... .........+..+. . ....+...+.+
T Consensus 345 ~~~~-~~~~~~-----~~~~~~-~~~~~~~~l~~~~~~~~~l~~~~~~-~~~~~~~~~l~~~i~~~~~~l~~~l~~l~~~ 416 (481)
T PLN03087 345 YEHI-SRTICL-----VICKNH-RLWEFLTRLLTRNRMRTFLIEGFFC-HTHNAAWHTLHNIICGSGSKLDGYLDHVRDQ 416 (481)
T ss_pred HHHH-Hhhhhc-----ccccch-HHHHHHHHHhhhhhhhHHHHHHHHh-ccchhhHHHHHHHHhchhhhhhhHHHHHHHh
Confidence 0000 000000 000000 0000000000000 00000 0000 00000000000000 0 01111223346
Q ss_pred CCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccc-cCcHHHHHHHHhcCcccccC
Q 012190 378 VKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLL-EEGISLLTIIKGTCKYRRSR 443 (468)
Q Consensus 378 i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~-e~p~~~~~~I~~~~F~~r~~ 443 (468)
+++|+|+|+|++|.++|++ ..+.+.+.+|++++++++++||++++ |+|+++++.|. +||+++.
T Consensus 417 I~vPtLII~Ge~D~ivP~~-~~~~la~~iP~a~l~vI~~aGH~~~v~e~p~~fa~~L~--~F~~~~~ 480 (481)
T PLN03087 417 LKCDVAIFHGGDDELIPVE-CSYAVKAKVPRARVKVIDDKDHITIVVGRQKEFARELE--EIWRRSS 480 (481)
T ss_pred CCCCEEEEEECCCCCCCHH-HHHHHHHhCCCCEEEEeCCCCCcchhhcCHHHHHHHHH--HHhhccC
Confidence 8999999999999999999 79999999999999999999999886 99999999999 7998863
|
|
| >PRK10673 acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-25 Score=211.61 Aligned_cols=234 Identities=13% Similarity=0.099 Sum_probs=152.9
Q ss_pred CCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC------ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeC
Q 012190 177 KGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT------PFEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (468)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S------s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS 250 (468)
.++|+|||+||++++...|..++..|.++|+|+++|+||||.| +++++++|+.++++.+ ..++++|+|||
T Consensus 14 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~~l~~l----~~~~~~lvGhS 89 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLDNLGVLARDLVNDHDIIQVDMRNHGLSPRDPVMNYPAMAQDLLDTLDAL----QIEKATFIGHS 89 (255)
T ss_pred CCCCCEEEECCCCCchhHHHHHHHHHhhCCeEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHc----CCCceEEEEEC
Confidence 4678999999999999999999999999999999999999988 5789999999999984 44589999999
Q ss_pred hhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHH
Q 012190 251 FGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIK 330 (468)
Q Consensus 251 ~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (468)
|||.+++.+|.++|++|+++|++++......... ....... +........... ................
T Consensus 90 ~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~--~~~~~~~--------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 158 (255)
T PRK10673 90 MGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRR--HDEIFAA--------INAVSEAGATTR-QQAAAIMRQHLNEEGV 158 (255)
T ss_pred HHHHHHHHHHHhCHhhcceEEEEecCCCCccchh--hHHHHHH--------HHHhhhcccccH-HHHHHHHHHhcCCHHH
Confidence 9999999999999999999999976432211100 0000000 000000000000 0000000000000000
Q ss_pred hhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcE
Q 012190 331 LEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCI 410 (468)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~ 410 (468)
.......+.. ....+.. ...+. ..... .....+..+++|+|+|+|++|..++++ ..+.+.+.+++++
T Consensus 159 ~~~~~~~~~~-------~~~~~~~-~~~~~--~~~~~--~~~~~~~~~~~P~l~i~G~~D~~~~~~-~~~~~~~~~~~~~ 225 (255)
T PRK10673 159 IQFLLKSFVD-------GEWRFNV-PVLWD--QYPHI--VGWEKIPAWPHPALFIRGGNSPYVTEA-YRDDLLAQFPQAR 225 (255)
T ss_pred HHHHHhcCCc-------ceeEeeH-HHHHH--hHHHH--hCCcccCCCCCCeEEEECCCCCCCCHH-HHHHHHHhCCCcE
Confidence 0000000000 0000000 00110 01000 012345778999999999999999998 7999999999999
Q ss_pred EEEeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 411 VRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 411 ~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
+++++++||++++|+|+++++.|. .|+.
T Consensus 226 ~~~~~~~gH~~~~~~p~~~~~~l~--~fl~ 253 (255)
T PRK10673 226 AHVIAGAGHWVHAEKPDAVLRAIR--RYLN 253 (255)
T ss_pred EEEeCCCCCeeeccCHHHHHHHHH--HHHh
Confidence 999999999999999999999999 4543
|
|
| >TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-25 Score=209.57 Aligned_cols=229 Identities=15% Similarity=0.211 Sum_probs=144.5
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCC------hHHHHHHHHHHHHHHhhcCCCCcEEEEEeChh
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP------FEGLVKFVEETVRREHASSPEKPIYLVGDSFG 252 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss------~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~G 252 (468)
.|+|||+||++++...|..+++.|.++|+|+++|+||||.|+ ++++++++.+.+ .++++++|||||
T Consensus 4 ~~~iv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~--------~~~~~lvG~S~G 75 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRCLDEELSAHFTLHLVDLPGHGRSRGFGPLSLADAAEAIAAQA--------PDPAIWLGWSLG 75 (245)
T ss_pred CceEEEEcCCCCchhhHHHHHHhhccCeEEEEecCCcCccCCCCCCcCHHHHHHHHHHhC--------CCCeEEEEEcHH
Confidence 478999999999999999999999888999999999999884 444444443321 258999999999
Q ss_pred HHHHHHHHHhCCCCceEEEEeCCCCCCCCCC-cC-cch-HHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhH
Q 012190 253 GCLALAVAARNPTIDLILILSNPATSFGRSQ-LQ-PLF-PILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRI 329 (468)
Q Consensus 253 G~ia~~~a~~~P~~v~~lVli~p~~~~~~~~-~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (468)
|.+++.+|.++|++++++|++++........ +. ... .....+...........+..+. .. ........ ..
T Consensus 76 g~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~-~~ 148 (245)
T TIGR01738 76 GLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFL----AL--QTLGTPTA-RQ 148 (245)
T ss_pred HHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHH----HH--HHhcCCcc-ch
Confidence 9999999999999999999998865432211 11 000 0000000000000000000000 00 00000000 00
Q ss_pred HhhhhhhhcchhcchhhhhhccCCc--chhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC
Q 012190 330 KLEQLSNNLPALLPRLSVMSDIIPK--DTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ 407 (468)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~ 407 (468)
....+...+. ..... ..+...+..+.. ......+.++++|+++++|++|.+++++ ..+.+.+.++
T Consensus 149 ~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~--~~~~~~l~~i~~Pvlii~g~~D~~~~~~-~~~~~~~~~~ 215 (245)
T TIGR01738 149 DARALKQTLL----------ARPTPNVQVLQAGLEILAT--VDLRQPLQNISVPFLRLYGYLDGLVPAK-VVPYLDKLAP 215 (245)
T ss_pred HHHHHHHHhh----------ccCCCCHHHHHHHHHHhhc--ccHHHHHhcCCCCEEEEeecCCcccCHH-HHHHHHHhCC
Confidence 0011111000 00000 111111111111 1123456789999999999999999999 6888999999
Q ss_pred CcEEEEeCCCCccccccCcHHHHHHHHh
Q 012190 408 NCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (468)
Q Consensus 408 ~~~~~~i~~aGH~~~~e~p~~~~~~I~~ 435 (468)
++++++++++||++++|+|+++++.|.+
T Consensus 216 ~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 243 (245)
T TIGR01738 216 HSELYIFAKAAHAPFLSHAEAFCALLVA 243 (245)
T ss_pred CCeEEEeCCCCCCccccCHHHHHHHHHh
Confidence 9999999999999999999999999994
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria. |
| >PHA02857 monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.3e-25 Score=212.02 Aligned_cols=250 Identities=14% Similarity=0.138 Sum_probs=153.5
Q ss_pred ccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCCC--------hHHHHH
Q 012190 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTP--------FEGLVK 226 (468)
Q Consensus 156 ~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss--------~~~~~~ 226 (468)
+...||..+....+.+... ..+.|+++||++++...|..+++.| ..+|+|+++|+||||.|+ +.++++
T Consensus 5 ~~~~~g~~l~~~~~~~~~~---~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~ 81 (276)
T PHA02857 5 MFNLDNDYIYCKYWKPITY---PKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVR 81 (276)
T ss_pred eecCCCCEEEEEeccCCCC---CCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHH
Confidence 4455666533322333222 3567777799999999999999999 558999999999999873 456667
Q ss_pred HHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHh
Q 012190 227 FVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLL 306 (468)
Q Consensus 227 dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (468)
|+.+.++.+....+..+++|+||||||.+|+.+|.++|+.++++|+++|...... . .....+. .......
T Consensus 82 d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~--~-~~~~~~~-------~~~~~~~ 151 (276)
T PHA02857 82 DVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEA--V-PRLNLLA-------AKLMGIF 151 (276)
T ss_pred HHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEecccccccc--c-cHHHHHH-------HHHHHHh
Confidence 7777776655445567899999999999999999999999999999998653211 0 0000000 0000000
Q ss_pred -hhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEE
Q 012190 307 -SYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVL 385 (468)
Q Consensus 307 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI 385 (468)
.......+.. ....... .+....... + ... .......+..... .........+.++++|+|+|
T Consensus 152 ~~~~~~~~~~~------~~~~~~~-~~~~~~~~~------~-~~~-~~~~~~~~~~~~~-~~~~~~~~~l~~i~~Pvliv 215 (276)
T PHA02857 152 YPNKIVGKLCP------ESVSRDM-DEVYKYQYD------P-LVN-HEKIKAGFASQVL-KATNKVRKIIPKIKTPILIL 215 (276)
T ss_pred CCCCccCCCCH------hhccCCH-HHHHHHhcC------C-Ccc-CCCccHHHHHHHH-HHHHHHHHhcccCCCCEEEE
Confidence 0000000000 0000000 000000000 0 000 0001111111111 11222346778999999999
Q ss_pred EeCCCCCCCcHHHHHHHHHhC-CCcEEEEeCCCCccccccCcH---HHHHHHHh
Q 012190 386 ASGKDNMLPSEDEAKRLNNSL-QNCIVRNFKDNGHTLLLEEGI---SLLTIIKG 435 (468)
Q Consensus 386 ~G~~D~~v~~~~~~~~l~~~l-~~~~~~~i~~aGH~~~~e~p~---~~~~~I~~ 435 (468)
+|++|.++|++ ..+.+.+.+ +++++++++++||.++.|.++ ++.+.+.+
T Consensus 216 ~G~~D~i~~~~-~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~ 268 (276)
T PHA02857 216 QGTNNEISDVS-GAYYFMQHANCNREIKIYEGAKHHLHKETDEVKKSVMKEIET 268 (276)
T ss_pred ecCCCCcCChH-HHHHHHHHccCCceEEEeCCCcccccCCchhHHHHHHHHHHH
Confidence 99999999999 799998877 478999999999999999874 45555553
|
|
| >PLN02385 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.9e-25 Score=220.42 Aligned_cols=256 Identities=18% Similarity=0.185 Sum_probs=156.6
Q ss_pred ccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchh-hHHHhHhhhc-CCeEEEEecCCCCCCC--------ChHHHH
Q 012190 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGL-GLILHHKPLG-KAFEVRCLHIPVYDRT--------PFEGLV 225 (468)
Q Consensus 156 ~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~-~~~~~~~~L~-~~~~V~~~D~~G~G~S--------s~~~~~ 225 (468)
+.+.+|....+....+.+. +.+++|||+||++++.. .|..+++.|. .+|+|+++|+||||.| ++++++
T Consensus 66 ~~~~~g~~l~~~~~~p~~~--~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~ 143 (349)
T PLN02385 66 EVNSRGVEIFSKSWLPENS--RPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFDDLV 143 (349)
T ss_pred EEcCCCCEEEEEEEecCCC--CCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHHHHH
Confidence 4455666532222222211 24678999999998866 4678888995 5899999999999987 467889
Q ss_pred HHHHHHHHHHhhc--CCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHH
Q 012190 226 KFVEETVRREHAS--SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVP 303 (468)
Q Consensus 226 ~dl~~~i~~~~~~--~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (468)
+|+.++++.+... ....+++|+||||||.+++.+|.++|+.++++|+++|............ .............+
T Consensus 144 ~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~--~~~~~~~~~~~~~p 221 (349)
T PLN02385 144 DDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPP--LVLQILILLANLLP 221 (349)
T ss_pred HHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCch--HHHHHHHHHHHHCC
Confidence 9999998876542 2345899999999999999999999999999999998764322111100 00000000000000
Q ss_pred HHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEE
Q 012190 304 YLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVL 383 (468)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvL 383 (468)
.. ......... .............. +. . ........+......+... ......+.++++|+|
T Consensus 222 ~~-~~~~~~~~~-------~~~~~~~~~~~~~~-~~-------~-~~~~~~~~~~~~~~~l~~~-~~~~~~l~~i~~P~L 283 (349)
T PLN02385 222 KA-KLVPQKDLA-------ELAFRDLKKRKMAE-YN-------V-IAYKDKPRLRTAVELLRTT-QEIEMQLEEVSLPLL 283 (349)
T ss_pred Cc-eecCCCccc-------cccccCHHHHHHhh-cC-------c-ceeCCCcchHHHHHHHHHH-HHHHHhcccCCCCEE
Confidence 00 000000000 00000000000000 00 0 0000011122222222221 223456788999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHHhC--CCcEEEEeCCCCccccccCcHH----HHHHHH
Q 012190 384 VLASGKDNMLPSEDEAKRLNNSL--QNCIVRNFKDNGHTLLLEEGIS----LLTIIK 434 (468)
Q Consensus 384 lI~G~~D~~v~~~~~~~~l~~~l--~~~~~~~i~~aGH~~~~e~p~~----~~~~I~ 434 (468)
+|+|++|.++++. ..+.+.+.+ +++++++++++||.+++|+|++ +.+.|.
T Consensus 284 ii~G~~D~vv~~~-~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~ 339 (349)
T PLN02385 284 ILHGEADKVTDPS-VSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDII 339 (349)
T ss_pred EEEeCCCCccChH-HHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHH
Confidence 9999999999999 689998887 4689999999999999999987 566666
|
|
| >TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-25 Score=209.81 Aligned_cols=238 Identities=20% Similarity=0.203 Sum_probs=155.3
Q ss_pred eecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC-------ChHHHHHHHHHHHHHHhhcCC
Q 012190 168 CPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHASSP 240 (468)
Q Consensus 168 ~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-------s~~~~~~dl~~~i~~~~~~~~ 240 (468)
+|...|.+ +++|+|||+||++++...|..+++.|.++|+|+++|+||||.| +++++++++.++++.+ .
T Consensus 3 ~~~~~g~~-~~~~~li~~hg~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~----~ 77 (251)
T TIGR02427 3 HYRLDGAA-DGAPVLVFINSLGTDLRMWDPVLPALTPDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHL----G 77 (251)
T ss_pred eEEeecCC-CCCCeEEEEcCcccchhhHHHHHHHhhcccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----C
Confidence 34444542 2578999999999999999999999988999999999999987 4788899999999874 3
Q ss_pred CCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhC-chhHHhhHHHHhhhhcCChhhHHHH
Q 012190 241 EKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAM-PDELHCAVPYLLSYVMGDPIKMAMV 319 (468)
Q Consensus 241 ~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (468)
.++++++||||||.+++.+|.++|+.++++|++++........ ........+ ....................
T Consensus 78 ~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 150 (251)
T TIGR02427 78 IERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPE--SWNARIAAVRAEGLAALADAVLERWFTPGF----- 150 (251)
T ss_pred CCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchh--hHHHHHhhhhhccHHHHHHHHHHHHccccc-----
Confidence 4589999999999999999999999999999998754322110 000000000 00000000000000000000
Q ss_pred hhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHH
Q 012190 320 NIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEA 399 (468)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~ 399 (468)
...... ..+.+...+. .............+. .......+.++++|+++++|++|.++|.+ ..
T Consensus 151 ---~~~~~~-~~~~~~~~~~-----------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Pvlii~g~~D~~~~~~-~~ 212 (251)
T TIGR02427 151 ---REAHPA-RLDLYRNMLV-----------RQPPDGYAGCCAAIR--DADFRDRLGAIAVPTLCIAGDQDGSTPPE-LV 212 (251)
T ss_pred ---ccCChH-HHHHHHHHHH-----------hcCHHHHHHHHHHHh--cccHHHHhhhcCCCeEEEEeccCCcCChH-HH
Confidence 000000 0000000000 000011111111111 11123456788999999999999999999 68
Q ss_pred HHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHh
Q 012190 400 KRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (468)
Q Consensus 400 ~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~ 435 (468)
+.+.+.+++.++++++++||++++++|+++.+.|.+
T Consensus 213 ~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~ 248 (251)
T TIGR02427 213 REIADLVPGARFAEIRGAGHIPCVEQPEAFNAALRD 248 (251)
T ss_pred HHHHHhCCCceEEEECCCCCcccccChHHHHHHHHH
Confidence 899999999999999999999999999999999983
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. |
| >PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A | Back alignment and domain information |
|---|
Probab=99.94 E-value=3e-25 Score=204.43 Aligned_cols=216 Identities=23% Similarity=0.258 Sum_probs=145.9
Q ss_pred EEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC---------ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChh
Q 012190 182 LLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT---------PFEGLVKFVEETVRREHASSPEKPIYLVGDSFG 252 (468)
Q Consensus 182 lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S---------s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~G 252 (468)
|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++++.++++++. .++++++|||+|
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~----~~~~~lvG~S~G 76 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALARGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALG----IKKVILVGHSMG 76 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHHTTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTT----TSSEEEEEETHH
T ss_pred eEEECCCCCCHHHHHHHHHHHhCCCEEEEEecCCccccccccccCCcchhhhhhhhhhcccccc----cccccccccccc
Confidence 79999999999999999999988999999999999988 36788999999999854 469999999999
Q ss_pred HHHHHHHHHhCCCCceEEEEeCCCCCCCCCCc-CcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHh
Q 012190 253 GCLALAVAARNPTIDLILILSNPATSFGRSQL-QPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKL 331 (468)
Q Consensus 253 G~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (468)
|.+++.++.++|++|+++|+++|......... .........+........ ..+....+. ....... .
T Consensus 77 g~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-------~~~~~~~-~ 144 (228)
T PF12697_consen 77 GMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSL----RRLASRFFY-------RWFDGDE-P 144 (228)
T ss_dssp HHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHH----HHHHHHHHH-------HHHTHHH-H
T ss_pred cccccccccccccccccceeecccccccccccccccchhhhhhhhcccccc----ccccccccc-------ccccccc-c
Confidence 99999999999999999999998663211100 000000000000000000 000000000 0000000 0
Q ss_pred hhhhhhcchhcchhhhhhccCCcchhHHHHHHHHH--HhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCc
Q 012190 332 EQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKS--ASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNC 409 (468)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~ 409 (468)
....+ .........+.. ........+..+++|+++++|++|.+++.+ ..+.+.+.++++
T Consensus 145 ~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~-~~~~~~~~~~~~ 205 (228)
T PF12697_consen 145 EDLIR------------------SSRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPE-SAEELADKLPNA 205 (228)
T ss_dssp HHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHH-HHHHHHHHSTTE
T ss_pred ccccc------------------ccccccccccccccccccccccccccCCCeEEeecCCCCCCCHH-HHHHHHHHCCCC
Confidence 00000 000111111111 222334566888999999999999999988 799999999999
Q ss_pred EEEEeCCCCccccccCcHHHHHH
Q 012190 410 IVRNFKDNGHTLLLEEGISLLTI 432 (468)
Q Consensus 410 ~~~~i~~aGH~~~~e~p~~~~~~ 432 (468)
++++++++||++++|+|++++++
T Consensus 206 ~~~~~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 206 ELVVIPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp EEEEETTSSSTHHHHSHHHHHHH
T ss_pred EEEEECCCCCccHHHCHHHHhcC
Confidence 99999999999999999999874
|
... |
| >PRK10749 lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.7e-25 Score=215.22 Aligned_cols=264 Identities=14% Similarity=0.122 Sum_probs=158.8
Q ss_pred cCccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC-------------
Q 012190 154 KEIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT------------- 219 (468)
Q Consensus 154 ~~~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S------------- 219 (468)
..++..+|.. ++|...+.+ .++++||++||++++...|..++..| ..+|+|+++|+||||.|
T Consensus 33 ~~~~~~~g~~---l~~~~~~~~-~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~ 108 (330)
T PRK10749 33 AEFTGVDDIP---IRFVRFRAP-HHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVE 108 (330)
T ss_pred eEEEcCCCCE---EEEEEccCC-CCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccc
Confidence 3445667765 345444321 24678999999999998999998877 77899999999999987
Q ss_pred ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHH
Q 012190 220 PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELH 299 (468)
Q Consensus 220 s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~ 299 (468)
+++++++|+..+++++....+..+++++||||||.+++.+|.++|+.++++|+++|........ ... ....+.....
T Consensus 109 ~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~-~~~--~~~~~~~~~~ 185 (330)
T PRK10749 109 RFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPL-PSW--MARRILNWAE 185 (330)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCC-CcH--HHHHHHHHHH
Confidence 3678899999999886544456799999999999999999999999999999999876432211 111 0000000000
Q ss_pred hhHHHHhhh--hcCChhhHHHHhhccCCC-hhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcc
Q 012190 300 CAVPYLLSY--VMGDPIKMAMVNIENRLP-PRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLH 376 (468)
Q Consensus 300 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~ 376 (468)
. .+..... .....+... .......+ ..+......+.+.. .+.. ........+....+.. ...+...+.
T Consensus 186 ~-~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~ 256 (330)
T PRK10749 186 G-HPRIRDGYAIGTGRWRPL-PFAINVLTHSRERYRRNLRFYAD----DPEL--RVGGPTYHWVRESILA-GEQVLAGAG 256 (330)
T ss_pred H-hcCCCCcCCCCCCCCCCC-CcCCCCCCCCHHHHHHHHHHHHh----CCCc--ccCCCcHHHHHHHHHH-HHHHHhhcc
Confidence 0 0000000 000000000 00000000 00000111111100 0000 0001112222222211 112335668
Q ss_pred cCCceEEEEEeCCCCCCCcHHHHHHHHHhC-------CCcEEEEeCCCCccccccCc---HHHHHHHH
Q 012190 377 AVKAEVLVLASGKDNMLPSEDEAKRLNNSL-------QNCIVRNFKDNGHTLLLEEG---ISLLTIIK 434 (468)
Q Consensus 377 ~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l-------~~~~~~~i~~aGH~~~~e~p---~~~~~~I~ 434 (468)
++++|+|+|+|++|++++++ ..+.+.+.+ +++++++++|+||.++.|.+ +.+.+.|.
T Consensus 257 ~i~~P~Lii~G~~D~vv~~~-~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~ 323 (330)
T PRK10749 257 DITTPLLLLQAEEERVVDNR-MHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIV 323 (330)
T ss_pred CCCCCEEEEEeCCCeeeCHH-HHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHH
Confidence 89999999999999999999 688888765 35689999999999999987 34445555
|
|
| >KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.6e-25 Score=207.65 Aligned_cols=258 Identities=15% Similarity=0.085 Sum_probs=165.4
Q ss_pred eeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhc-CCeEEEEecCCCCCCC---------ChHHHHHHHHHHHHH
Q 012190 165 RWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVYDRT---------PFEGLVKFVEETVRR 234 (468)
Q Consensus 165 ~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~-~~~~V~~~D~~G~G~S---------s~~~~~~dl~~~i~~ 234 (468)
.++++.+.|. .++|.++++||++.++..|+.++..|+ .+|+|+++|+||+|.| ++..++.|+..++++
T Consensus 32 I~~h~~e~g~--~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~ 109 (322)
T KOG4178|consen 32 IRLHYVEGGP--GDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDH 109 (322)
T ss_pred EEEEEEeecC--CCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHH
Confidence 4567777775 479999999999999999999999994 4599999999999999 478899999999999
Q ss_pred HhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhH-----------Hhh--
Q 012190 235 EHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDEL-----------HCA-- 301 (468)
Q Consensus 235 ~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~-----------~~~-- 301 (468)
+. .++++++||+|||.+|+.+|..+|++|+++|+++.....+... ..........+.. ...
T Consensus 110 Lg----~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~--~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s 183 (322)
T KOG4178|consen 110 LG----LKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLK--PLDSSKAIFGKSYYICLFQEPGKPETELS 183 (322)
T ss_pred hc----cceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccc--hhhhhccccCccceeEeccccCcchhhhc
Confidence 54 6699999999999999999999999999999998876521111 0000000000000 000
Q ss_pred ---HHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHH---Hhhhc
Q 012190 302 ---VPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAY---ANSRL 375 (468)
Q Consensus 302 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~l 375 (468)
...+...+........ ......+.. .+.+. ....+......+..+.+...+...+..... ....+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~w~-----t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~~~ 254 (322)
T KOG4178|consen 184 KDDTEMLVKTFRTRKTPGP--LIVPKQPNE--NPLWL-----TEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPWAL 254 (322)
T ss_pred cchhHHhHHhhhccccCCc--cccCCCCCC--ccchh-----hHHHHHHHHhccccccccccchhhHHHhhCchhccccc
Confidence 0000000100000000 000000000 00000 001111111112222222222222222222 24567
Q ss_pred ccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCc-EEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 376 HAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNC-IVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 376 ~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~-~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
.++++|+++|+|+.|.+.+.....+.+.+..++. +.++++++||+++.|+|+++++.|. .|+..
T Consensus 255 ~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~--~f~~~ 319 (322)
T KOG4178|consen 255 AKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAIL--GFINS 319 (322)
T ss_pred cccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHH--HHHHh
Confidence 8999999999999999998875567777777866 7888999999999999999999999 56543
|
|
| >KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-24 Score=203.82 Aligned_cols=255 Identities=19% Similarity=0.146 Sum_probs=153.6
Q ss_pred CCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCC-----------hHHHHHHHH
Q 012190 161 GGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP-----------FEGLVKFVE 229 (468)
Q Consensus 161 g~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss-----------~~~~~~dl~ 229 (468)
++.-.|..-....+ .+++++||+||+|++...|....+.|++.++|+++|+||+|+|+ .+.+++.++
T Consensus 74 ~~~~iw~~~~~~~~--~~~~plVliHGyGAg~g~f~~Nf~~La~~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE 151 (365)
T KOG4409|consen 74 NGIEIWTITVSNES--ANKTPLVLIHGYGAGLGLFFRNFDDLAKIRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIE 151 (365)
T ss_pred CCceeEEEeecccc--cCCCcEEEEeccchhHHHHHHhhhhhhhcCceEEecccCCCCCCCCCCCCCcccchHHHHHHHH
Confidence 33445554444433 46789999999999999999999999999999999999999994 456777777
Q ss_pred HHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCc-----CcchHHHhhCchhHHhhHHH
Q 012190 230 ETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQL-----QPLFPILKAMPDELHCAVPY 304 (468)
Q Consensus 230 ~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 304 (468)
++... .+..+.+|+|||+||.+|..||.+||++|+.|||++|+.-..+... .........+........|.
T Consensus 152 ~WR~~----~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl 227 (365)
T KOG4409|consen 152 QWRKK----MGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFNPL 227 (365)
T ss_pred HHHHH----cCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhhhhhcCCHH
Confidence 77776 4455999999999999999999999999999999999764432210 11101111111110000011
Q ss_pred HhhhhcC-------ChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHH----hHHHhh
Q 012190 305 LLSYVMG-------DPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSA----SAYANS 373 (468)
Q Consensus 305 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~ 373 (468)
.+-..++ ..+.............+++..++..... ..+..--..++.+... ...+.+
T Consensus 228 ~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n------------~~~psgE~~fk~l~~~~g~Ar~Pm~~ 295 (365)
T KOG4409|consen 228 ALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCN------------AQNPSGETAFKNLFEPGGWARRPMIQ 295 (365)
T ss_pred HHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhc------------CCCCcHHHHHHHHHhccchhhhhHHH
Confidence 0000000 0000001000000001111000000000 0001111111122111 111234
Q ss_pred hcccCC--ceEEEEEeCCCCCCCcHHHHHHHHHh--CCCcEEEEeCCCCccccccCcHHHHHHHHh
Q 012190 374 RLHAVK--AEVLVLASGKDNMLPSEDEAKRLNNS--LQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (468)
Q Consensus 374 ~l~~i~--~PvLlI~G~~D~~v~~~~~~~~l~~~--l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~ 435 (468)
++..++ ||+++|+|++|.+.... ..++.+. ...++.+++|++||.+++|+|+.|++.+.+
T Consensus 296 r~~~l~~~~pv~fiyG~~dWmD~~~--g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~ 359 (365)
T KOG4409|consen 296 RLRELKKDVPVTFIYGDRDWMDKNA--GLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLE 359 (365)
T ss_pred HHHhhccCCCEEEEecCcccccchh--HHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHH
Confidence 445555 99999999999887665 4555553 336899999999999999999999999984
|
|
| >PLN03084 alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-24 Score=215.93 Aligned_cols=244 Identities=15% Similarity=0.117 Sum_probs=153.7
Q ss_pred eecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC-----------ChHHHHHHHHHHHHHHh
Q 012190 168 CPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-----------PFEGLVKFVEETVRREH 236 (468)
Q Consensus 168 ~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-----------s~~~~~~dl~~~i~~~~ 236 (468)
+|.+.|. .++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++++.++++++.
T Consensus 118 ~y~~~G~--~~~~~ivllHG~~~~~~~w~~~~~~L~~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~ 195 (383)
T PLN03084 118 FCVESGS--NNNPPVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDELK 195 (383)
T ss_pred EEEecCC--CCCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHhC
Confidence 4666664 2468999999999999999999999988999999999999976 36788999999999854
Q ss_pred hcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhH
Q 012190 237 ASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKM 316 (468)
Q Consensus 237 ~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
.++++|+|||+||.+++.+|.++|++|+++|+++|+.......... .+..+... ....++. ..+...
T Consensus 196 ----~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~---~l~~~~~~---l~~~~~~---~~~~~~ 262 (383)
T PLN03084 196 ----SDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPS---TLSEFSNF---LLGEIFS---QDPLRA 262 (383)
T ss_pred ----CCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchH---HHHHHHHH---Hhhhhhh---cchHHH
Confidence 4589999999999999999999999999999999865321111110 00000000 0000000 000000
Q ss_pred HHHhhc----cCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHH----hHHHhhh--cccCCceEEEEE
Q 012190 317 AMVNIE----NRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSA----SAYANSR--LHAVKAEVLVLA 386 (468)
Q Consensus 317 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~--l~~i~~PvLlI~ 386 (468)
...... ..... +....+...+.... .....+......+... ....... ...+++|+|+|+
T Consensus 263 ~~~~~~~~~~~~~~~-e~~~~~~~~~~~~~---------~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~ 332 (383)
T PLN03084 263 SDKALTSCGPYAMKE-DDAMVYRRPYLTSG---------SSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCW 332 (383)
T ss_pred HhhhhcccCccCCCH-HHHHHHhccccCCc---------chHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEe
Confidence 000000 00000 00001111000000 0000000001111100 0001111 146799999999
Q ss_pred eCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 387 SGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 387 G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
|++|.+++.+ ..+.+.+. .++++++++++||++++|+|+++++.|. .|++
T Consensus 333 G~~D~~v~~~-~~~~~a~~-~~a~l~vIp~aGH~~~~E~Pe~v~~~I~--~Fl~ 382 (383)
T PLN03084 333 GLRDRWLNYD-GVEDFCKS-SQHKLIELPMAGHHVQEDCGEELGGIIS--GILS 382 (383)
T ss_pred eCCCCCcCHH-HHHHHHHh-cCCeEEEECCCCCCcchhCHHHHHHHHH--HHhh
Confidence 9999999998 68888876 4889999999999999999999999999 5554
|
|
| >KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-25 Score=218.97 Aligned_cols=253 Identities=23% Similarity=0.258 Sum_probs=152.5
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhcCC--eEEEEecCCCCCCC---------ChHHHHHHHHHHHHHHhhcCCCCcEEE
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLGKA--FEVRCLHIPVYDRT---------PFEGLVKFVEETVRREHASSPEKPIYL 246 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~~--~~V~~~D~~G~G~S---------s~~~~~~dl~~~i~~~~~~~~~~~i~L 246 (468)
++|+||++|||+++...|..++..|.+. +.|+++|++|+|.+ +..++++.+..+..+ ...+++++
T Consensus 57 ~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~----~~~~~~~l 132 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKE----VFVEPVSL 132 (326)
T ss_pred CCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHh----hcCcceEE
Confidence 5789999999999999999999999766 99999999999944 256677777777666 55668999
Q ss_pred EEeChhHHHHHHHHHhCCCCceEEE---EeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcC-ChhhHHHHhhc
Q 012190 247 VGDSFGGCLALAVAARNPTIDLILI---LSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMG-DPIKMAMVNIE 322 (468)
Q Consensus 247 vGhS~GG~ia~~~a~~~P~~v~~lV---li~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 322 (468)
+|||+||.+|+.+|+.+|+.|+++| ++++...........................+........ -...+......
T Consensus 133 vghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 212 (326)
T KOG1454|consen 133 VGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEGLLRCLKV 212 (326)
T ss_pred EEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchhheeHhhhcceee
Confidence 9999999999999999999999999 5555443222221111111111111110000000000000 00000000000
Q ss_pred cCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCC-ceEEEEEeCCCCCCCcHHHHHH
Q 012190 323 NRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVK-AEVLVLASGKDNMLPSEDEAKR 401 (468)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~-~PvLlI~G~~D~~v~~~~~~~~ 401 (468)
.........+.....+.... ......+............+......+.++. ||+|+++|++|+++|.+ .+..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~-~~~~ 285 (326)
T KOG1454|consen 213 VYTDPSRLLEKLLHLLSRPV------KEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLE-LAEE 285 (326)
T ss_pred eccccccchhhhhhheeccc------ccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHH-HHHH
Confidence 00000000001000000000 0000000000000000000112223446666 99999999999999999 7999
Q ss_pred HHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccccC
Q 012190 402 LNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSR 443 (468)
Q Consensus 402 l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r~~ 443 (468)
+.+.+|++++++++++||.+++|.|++++..|. .|+++..
T Consensus 286 ~~~~~pn~~~~~I~~~gH~~h~e~Pe~~~~~i~--~Fi~~~~ 325 (326)
T KOG1454|consen 286 LKKKLPNAELVEIPGAGHLPHLERPEEVAALLR--SFIARLR 325 (326)
T ss_pred HHhhCCCceEEEeCCCCcccccCCHHHHHHHHH--HHHHHhc
Confidence 999999999999999999999999999999999 7887754
|
|
| >PRK06489 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-24 Score=215.36 Aligned_cols=257 Identities=13% Similarity=0.097 Sum_probs=148.4
Q ss_pred eeecCCCCCC-----CCCCeEEEeCCCCCchhhHH--HhHhhh--------cCCeEEEEecCCCCCCCC-----------
Q 012190 167 FCPVDCGRPL-----KGSPTLLFLPGIDGLGLGLI--LHHKPL--------GKAFEVRCLHIPVYDRTP----------- 220 (468)
Q Consensus 167 ~~y~~~g~~~-----~~~p~lV~lHG~~~s~~~~~--~~~~~L--------~~~~~V~~~D~~G~G~Ss----------- 220 (468)
++|...|++. +.+|+|||+||++++...|. .+.+.| .++|+|+++|+||||.|+
T Consensus 52 i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~ 131 (360)
T PRK06489 52 LHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAAFP 131 (360)
T ss_pred EEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCCCC
Confidence 5666667521 01689999999999988775 444333 678999999999999883
Q ss_pred ---hHHHHHHHHHHH-HHHhhcCCCCcEE-EEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCC-CcCcch---HHH
Q 012190 221 ---FEGLVKFVEETV-RREHASSPEKPIY-LVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRS-QLQPLF---PIL 291 (468)
Q Consensus 221 ---~~~~~~dl~~~i-~~~~~~~~~~~i~-LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~-~~~~~~---~~~ 291 (468)
++++++++.+++ ++ .+.++++ |+||||||.+|+.+|.++|++|+++|++++....... .+.... ...
T Consensus 132 ~~~~~~~a~~~~~~l~~~----lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~~~~~~~~~~~ 207 (360)
T PRK06489 132 RYDYDDMVEAQYRLVTEG----LGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNWMWRRMLIESI 207 (360)
T ss_pred cccHHHHHHHHHHHHHHh----cCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHHHHHHHHHHHH
Confidence 356666666644 44 3344664 8999999999999999999999999999875321110 000000 000
Q ss_pred hhCchhH-------HhhHHHHhhh--hcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHH
Q 012190 292 KAMPDEL-------HCAVPYLLSY--VMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLK 362 (468)
Q Consensus 292 ~~~~~~~-------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 362 (468)
....... .......... ........... ....... ......+... ..... .....+.....
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~------~~~~~-~~~~~~~~~~~ 277 (360)
T PRK06489 208 RNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQ--AQAPTRA-AADKLVDERL------AAPVT-ADANDFLYQWD 277 (360)
T ss_pred HhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHH--HhcCChH-HHHHHHHHHH------Hhhhh-cCHHHHHHHHH
Confidence 0000000 0000000000 00000000000 0000000 0001111000 00000 01111111111
Q ss_pred HHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHH--HHHHHhCCCcEEEEeCCC----CccccccCcHHHHHHHHhc
Q 012190 363 LLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEA--KRLNNSLQNCIVRNFKDN----GHTLLLEEGISLLTIIKGT 436 (468)
Q Consensus 363 ~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~--~~l~~~l~~~~~~~i~~a----GH~~~~e~p~~~~~~I~~~ 436 (468)
... .......+.++++|+|+|+|++|.++|++ .. +.+.+.+|++++++++++ ||.++ |+|+++++.|.
T Consensus 278 ~~~--~~d~~~~L~~I~~PvLvI~G~~D~~~p~~-~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~-- 351 (360)
T PRK06489 278 SSR--DYNPSPDLEKIKAPVLAINSADDERNPPE-TGVMEAALKRVKHGRLVLIPASPETRGHGTT-GSAKFWKAYLA-- 351 (360)
T ss_pred Hhh--ccChHHHHHhCCCCEEEEecCCCcccChh-hHHHHHHHHhCcCCeEEEECCCCCCCCcccc-cCHHHHHHHHH--
Confidence 111 11124567899999999999999999988 45 789999999999999996 99997 89999999999
Q ss_pred CcccccC
Q 012190 437 CKYRRSR 443 (468)
Q Consensus 437 ~F~~r~~ 443 (468)
.|+....
T Consensus 352 ~FL~~~~ 358 (360)
T PRK06489 352 EFLAQVP 358 (360)
T ss_pred HHHHhcc
Confidence 6776543
|
|
| >PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.8e-25 Score=206.22 Aligned_cols=224 Identities=17% Similarity=0.181 Sum_probs=139.6
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC------ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChh
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT------PFEGLVKFVEETVRREHASSPEKPIYLVGDSFG 252 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S------s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~G 252 (468)
+|+|||+||++++...|..+++.|. +|+|+++|+||||.| +++++++++.+++++ .+.++++++|||||
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~----~~~~~~~lvG~S~G 76 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEALP-DYPRLYIDLPGHGGSAAISVDGFADVSRLLSQTLQS----YNILPYWLVGYSLG 76 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHcC-CCCEEEecCCCCCCCCCccccCHHHHHHHHHHHHHH----cCCCCeEEEEECHH
Confidence 6789999999999999999999995 799999999999988 588999999999998 34569999999999
Q ss_pred HHHHHHHHHhCCCC-ceEEEEeCCCCCCCCCCcCcchHHHhhCch-hHHh-----hHHHHhhhhcCChhhHHHHhhccCC
Q 012190 253 GCLALAVAARNPTI-DLILILSNPATSFGRSQLQPLFPILKAMPD-ELHC-----AVPYLLSYVMGDPIKMAMVNIENRL 325 (468)
Q Consensus 253 G~ia~~~a~~~P~~-v~~lVli~p~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (468)
|.+|+.+|.++|+. +++++++++......... ........ .+.. .....+......+ .....
T Consensus 77 g~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 145 (242)
T PRK11126 77 GRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEE----RQARWQNDRQWAQRFRQEPLEQVLADWYQQP-------VFASL 145 (242)
T ss_pred HHHHHHHHHhCCcccccEEEEeCCCCCCCCHHH----HHHHHhhhHHHHHHhccCcHHHHHHHHHhcc-------hhhcc
Confidence 99999999999765 999999887543221100 00000000 0000 0000000000000 00001
Q ss_pred ChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHH-HHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHH
Q 012190 326 PPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLK-SASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNN 404 (468)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~ 404 (468)
.... ...+..... . .............. .........+.++++|+++|+|++|..+. .+.+
T Consensus 146 ~~~~-~~~~~~~~~----------~-~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~------~~~~ 207 (242)
T PRK11126 146 NAEQ-RQQLVAKRS----------N-NNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ------ALAQ 207 (242)
T ss_pred CccH-HHHHHHhcc----------c-CCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH------HHHH
Confidence 0000 000000000 0 00000000000000 00112235678899999999999998542 2223
Q ss_pred hCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcc
Q 012190 405 SLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKY 439 (468)
Q Consensus 405 ~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~ 439 (468)
. .++++++++++||++++|+|+++++.|. .|+
T Consensus 208 ~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl 239 (242)
T PRK11126 208 Q-LALPLHVIPNAGHNAHRENPAAFAASLA--QIL 239 (242)
T ss_pred H-hcCeEEEeCCCCCchhhhChHHHHHHHH--HHH
Confidence 2 3789999999999999999999999999 454
|
|
| >PLN02298 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.9e-24 Score=210.87 Aligned_cols=254 Identities=16% Similarity=0.139 Sum_probs=153.1
Q ss_pred CccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchh-hHHHhHhhh-cCCeEEEEecCCCCCCCC--------hHHH
Q 012190 155 EIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGL-GLILHHKPL-GKAFEVRCLHIPVYDRTP--------FEGL 224 (468)
Q Consensus 155 ~~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~-~~~~~~~~L-~~~~~V~~~D~~G~G~Ss--------~~~~ 224 (468)
.+...||.......+.+.+. .+.+++|||+||++.+.. .|..+...| ..+|+|+++|+||||.|+ ++++
T Consensus 36 ~~~~~dg~~l~~~~~~~~~~-~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~ 114 (330)
T PLN02298 36 FFTSPRGLSLFTRSWLPSSS-SPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPNVDLV 114 (330)
T ss_pred eEEcCCCCEEEEEEEecCCC-CCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccCCCHHHH
Confidence 45566777643333322221 123678999999986643 566677778 468999999999999883 6778
Q ss_pred HHHHHHHHHHHhhc--CCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhH
Q 012190 225 VKFVEETVRREHAS--SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAV 302 (468)
Q Consensus 225 ~~dl~~~i~~~~~~--~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (468)
++|+.++++.+... ....+++|+||||||.+++.++.++|++++++|+++|............ .... .... .
T Consensus 115 ~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-~~~~-~~~~----~ 188 (330)
T PLN02298 115 VEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPW-PIPQ-ILTF----V 188 (330)
T ss_pred HHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCch-HHHH-HHHH----H
Confidence 99999999987653 2345899999999999999999999999999999998654322111000 0000 0000 0
Q ss_pred HHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCC-cchhHHHHHHHHHHhHHHhhhcccCCce
Q 012190 303 PYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIP-KDTLLWKLKLLKSASAYANSRLHAVKAE 381 (468)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~l~~i~~P 381 (468)
..+.......+... ......... ....+... . + ..+. .....+....+ .........+.++++|
T Consensus 189 ~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~-~------~---~~~~~~~~~~~~~~~~-~~~~~~~~~l~~i~~P 253 (330)
T PLN02298 189 ARFLPTLAIVPTAD---LLEKSVKVP-AKKIIAKR-N------P---MRYNGKPRLGTVVELL-RVTDYLGKKLKDVSIP 253 (330)
T ss_pred HHHCCCCccccCCC---cccccccCH-HHHHHHHh-C------c---cccCCCccHHHHHHHH-HHHHHHHHhhhhcCCC
Confidence 00000000000000 000000000 00000000 0 0 0000 01111111111 1222234567889999
Q ss_pred EEEEEeCCCCCCCcHHHHHHHHHhCC--CcEEEEeCCCCccccccCcHHHHH
Q 012190 382 VLVLASGKDNMLPSEDEAKRLNNSLQ--NCIVRNFKDNGHTLLLEEGISLLT 431 (468)
Q Consensus 382 vLlI~G~~D~~v~~~~~~~~l~~~l~--~~~~~~i~~aGH~~~~e~p~~~~~ 431 (468)
+|+|+|++|.++|++ ..+.+++.++ ++++++++++||.+++++|+...+
T Consensus 254 vLii~G~~D~ivp~~-~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~ 304 (330)
T PLN02298 254 FIVLHGSADVVTDPD-VSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIE 304 (330)
T ss_pred EEEEecCCCCCCCHH-HHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHH
Confidence 999999999999999 7899888774 789999999999999999875443
|
|
| >KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-25 Score=202.92 Aligned_cols=270 Identities=16% Similarity=0.208 Sum_probs=177.1
Q ss_pred cchHHHHHHhccCccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcC--CeEEEEecCCCCCCC-
Q 012190 143 TDSVKDYLDAAKEIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGK--AFEVRCLHIPVYDRT- 219 (468)
Q Consensus 143 ~~~~~~y~~~~~~~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~--~~~V~~~D~~G~G~S- 219 (468)
...|++||++.+.+..+++.. .+..|... .+.+.+|.++++||+|.++..|..++++|.. ..+|+++|+||||+|
T Consensus 40 ~~pWs~yFdekedv~i~~~~~-t~n~Y~t~-~~~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk 117 (343)
T KOG2564|consen 40 PVPWSDYFDEKEDVSIDGSDL-TFNVYLTL-PSATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETK 117 (343)
T ss_pred CCchHHhhccccccccCCCcc-eEEEEEec-CCCCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccc
Confidence 455899999988876555442 34444433 2245699999999999999999999999933 478888999999998
Q ss_pred -------ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHh--CCCCceEEEEeCCCCCCCCCCcCcchHH
Q 012190 220 -------PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR--NPTIDLILILSNPATSFGRSQLQPLFPI 290 (468)
Q Consensus 220 -------s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~--~P~~v~~lVli~p~~~~~~~~~~~~~~~ 290 (468)
+.+.+++|+-.+++.+..+.+ .+|+||||||||+||...|.. -|. +.|+++++-.-+.....+..+..+
T Consensus 118 ~~~e~dlS~eT~~KD~~~~i~~~fge~~-~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVVEgtAmeAL~~m~~f 195 (343)
T KOG2564|consen 118 VENEDDLSLETMSKDFGAVIKELFGELP-PQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVVEGTAMEALNSMQHF 195 (343)
T ss_pred cCChhhcCHHHHHHHHHHHHHHHhccCC-CceEEEeccccchhhhhhhhhhhchh-hhceEEEEEechHHHHHHHHHHHH
Confidence 578899999999998875433 379999999999999888765 455 889999987665544444444555
Q ss_pred HhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCc-chhHHHHHHHHHHhH
Q 012190 291 LKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPK-DTLLWKLKLLKSASA 369 (468)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~ 369 (468)
+...|..+...-...-... ... ...+.. +..-.++........ ..+.|+.++....+.
T Consensus 196 L~~rP~~F~Si~~Ai~W~v-~sg------~~Rn~~--------------SArVsmP~~~~~~~eGh~yvwrtdL~kte~Y 254 (343)
T KOG2564|consen 196 LRNRPKSFKSIEDAIEWHV-RSG------QLRNRD--------------SARVSMPSQLKQCEEGHCYVWRTDLEKTEQY 254 (343)
T ss_pred HhcCCccccchhhHHHHHh-ccc------cccccc--------------cceEecchheeeccCCCcEEEEeeccccchh
Confidence 5555554332211110000 000 000000 000011111111111 123333222222111
Q ss_pred H------HhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccccC
Q 012190 370 Y------ANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSR 443 (468)
Q Consensus 370 ~------~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r~~ 443 (468)
| +...+-...+|.++|.++.|++...- .+-++..+.++.+++.+||+.+.+.|.+++..+. .||.|++
T Consensus 255 W~gWF~gLS~~Fl~~p~~klLilAg~d~LDkdL----tiGQMQGk~Q~~vL~~~GH~v~ED~P~kva~~~~--~f~~Rn~ 328 (343)
T KOG2564|consen 255 WKGWFKGLSDKFLGLPVPKLLILAGVDRLDKDL----TIGQMQGKFQLQVLPLCGHFVHEDSPHKVAECLC--VFWIRNR 328 (343)
T ss_pred HHHHHhhhhhHhhCCCccceeEEecccccCcce----eeeeeccceeeeeecccCceeccCCcchHHHHHH--HHHhhhc
Confidence 1 23455677899999999999875332 3344445779999999999999999999999999 8999987
|
|
| >TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-23 Score=196.65 Aligned_cols=234 Identities=22% Similarity=0.288 Sum_probs=143.6
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCC---------hHHHHHH-HHHHHHHHhhcCCCCcEEEEE
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP---------FEGLVKF-VEETVRREHASSPEKPIYLVG 248 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss---------~~~~~~d-l~~~i~~~~~~~~~~~i~LvG 248 (468)
+|+|||+||++++...|.++++.|+++|+|+++|+||||.|+ +++.+++ +..+++. .+.++++++|
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~G 76 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLGPHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQ----LGIEPFFLVG 76 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhcccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHH----cCCCeEEEEE
Confidence 368999999999999999999999989999999999999883 4555555 4444444 4566899999
Q ss_pred eChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHh--hCchhHH-hhHHHHhhhhcCChhhHHHHhhccCC
Q 012190 249 DSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILK--AMPDELH-CAVPYLLSYVMGDPIKMAMVNIENRL 325 (468)
Q Consensus 249 hS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (468)
|||||.+++.+|.++|+.+.+++++++............ .... .....+. .............+. .......
T Consensus 77 ~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 151 (251)
T TIGR03695 77 YSMGGRIALYYALQYPERVQGLILESGSPGLATEEERAA-RRQNDEQLAQRFEQEGLEAFLDDWYQQPL----FASQKNL 151 (251)
T ss_pred eccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhh-hhhcchhhhhHHHhcCccHHHHHHhcCce----eeecccC
Confidence 999999999999999999999999988654322110000 0000 0000000 000000000000000 0000001
Q ss_pred ChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHH-HHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHH
Q 012190 326 PPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLK-SASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNN 404 (468)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~ 404 (468)
+... .+.+..... . .....+...+.... .........+..+++|+++|+|++|..++ . ..+.+.+
T Consensus 152 ~~~~-~~~~~~~~~----------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~-~~~~~~~ 217 (251)
T TIGR03695 152 PPEQ-RQALRAKRL----------A-NNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-Q-IAKEMQK 217 (251)
T ss_pred ChHH-hHHHHHhcc----------c-ccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-H-HHHHHHh
Confidence 1100 111111000 0 00111111111110 01111224467899999999999998774 4 4777888
Q ss_pred hCCCcEEEEeCCCCccccccCcHHHHHHHHh
Q 012190 405 SLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (468)
Q Consensus 405 ~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~ 435 (468)
..+++++++++++||++++|+|+++++.|.+
T Consensus 218 ~~~~~~~~~~~~~gH~~~~e~~~~~~~~i~~ 248 (251)
T TIGR03695 218 LLPNLTLVIIANAGHNIHLENPEAFAKILLA 248 (251)
T ss_pred cCCCCcEEEEcCCCCCcCccChHHHHHHHHH
Confidence 8899999999999999999999999999984
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. |
| >TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.91 E-value=2e-23 Score=207.36 Aligned_cols=252 Identities=17% Similarity=0.182 Sum_probs=153.5
Q ss_pred eeecCCCCCC-CCCCeEEEeCCCCCchh-----------hHHHhH---hhh-cCCeEEEEecCCC--CCCC---------
Q 012190 167 FCPVDCGRPL-KGSPTLLFLPGIDGLGL-----------GLILHH---KPL-GKAFEVRCLHIPV--YDRT--------- 219 (468)
Q Consensus 167 ~~y~~~g~~~-~~~p~lV~lHG~~~s~~-----------~~~~~~---~~L-~~~~~V~~~D~~G--~G~S--------- 219 (468)
++|...|.+. .++|+|||+||++++.. .|..++ ..| .++|+|+++|+|| ||.|
T Consensus 18 ~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~ 97 (351)
T TIGR01392 18 VAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINPGG 97 (351)
T ss_pred EEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCCCC
Confidence 5777777531 24679999999999773 377775 244 7889999999999 5544
Q ss_pred ----------ChHHHHHHHHHHHHHHhhcCCCCc-EEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcch
Q 012190 220 ----------PFEGLVKFVEETVRREHASSPEKP-IYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLF 288 (468)
Q Consensus 220 ----------s~~~~~~dl~~~i~~~~~~~~~~~-i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~ 288 (468)
+++++++++.++++++ +.++ ++|+||||||.+++.+|.++|++++++|++++.......... ..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~~ 172 (351)
T TIGR01392 98 RPYGSDFPLITIRDDVKAQKLLLDHL----GIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCIA-FN 172 (351)
T ss_pred CcCCCCCCCCcHHHHHHHHHHHHHHc----CCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHHH-HH
Confidence 2578899999999884 3446 999999999999999999999999999999986543211100 00
Q ss_pred HHH-hhC---ch-------------hHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcch-----------
Q 012190 289 PIL-KAM---PD-------------ELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPA----------- 340 (468)
Q Consensus 289 ~~~-~~~---~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 340 (468)
... ..+ .. .... ....+... .....+.....+......
T Consensus 173 ~~~~~~~~~~~~~~~g~~~~~~~p~~~~~-~~~~~~~~-------------~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 238 (351)
T TIGR01392 173 EVQRQAILADPNWNDGDYYEDGQPDRGLA-LARMLAHL-------------TYRSEESMAERFGRAPQSGESPASGFDTR 238 (351)
T ss_pred HHHHHHHHhCCCCCCCCCCCCCChhhHHH-HHHHHHHH-------------hcCCHHHHHHHhCcCcccccccccccCcc
Confidence 000 000 00 0000 00000000 000000000000000000
Q ss_pred -----hcc-hhhhhhccCCcchhHHHHHHHHHHh-----HHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCc
Q 012190 341 -----LLP-RLSVMSDIIPKDTLLWKLKLLKSAS-----AYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNC 409 (468)
Q Consensus 341 -----~~~-~~~~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~ 409 (468)
... ....................+...+ ....+.+.++++|+|+|+|++|.++|+. ..+.+.+.++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~-~~~~~a~~i~~~ 317 (351)
T TIGR01392 239 FQVESYLRYQGDKFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPA-ESRELAKALPAA 317 (351)
T ss_pred chHHHHHHHHHHHHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHH-HHHHHHHHHhhc
Confidence 000 0000001111111111112222211 1124677899999999999999999999 799999999988
Q ss_pred EEE-----EeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 410 IVR-----NFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 410 ~~~-----~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
+++ +++++||++++|+|+++++.|. +|++
T Consensus 318 ~~~v~~~~i~~~~GH~~~le~p~~~~~~l~--~FL~ 351 (351)
T TIGR01392 318 GLRVTYVEIESPYGHDAFLVETDQVEELIR--GFLR 351 (351)
T ss_pred CCceEEEEeCCCCCcchhhcCHHHHHHHHH--HHhC
Confidence 765 5678999999999999999999 5653
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. |
| >PRK07581 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-23 Score=207.21 Aligned_cols=258 Identities=12% Similarity=0.017 Sum_probs=149.1
Q ss_pred eeecCCCCCC-CCCCeEEEeCCCCCchhhHHHhH---hhh-cCCeEEEEecCCCCCCCChH----------H-----HHH
Q 012190 167 FCPVDCGRPL-KGSPTLLFLPGIDGLGLGLILHH---KPL-GKAFEVRCLHIPVYDRTPFE----------G-----LVK 226 (468)
Q Consensus 167 ~~y~~~g~~~-~~~p~lV~lHG~~~s~~~~~~~~---~~L-~~~~~V~~~D~~G~G~Ss~~----------~-----~~~ 226 (468)
++|...|.+. .+.|+||++||++++...|..++ +.| .++|+|+++|+||||.|+.. + +++
T Consensus 28 l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~ 107 (339)
T PRK07581 28 LAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYD 107 (339)
T ss_pred EEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHH
Confidence 5677777532 23567888888887766665543 467 46899999999999998521 1 466
Q ss_pred HHHH----HHHHHhhcCCCCc-EEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHH---hhCchh-
Q 012190 227 FVEE----TVRREHASSPEKP-IYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPIL---KAMPDE- 297 (468)
Q Consensus 227 dl~~----~i~~~~~~~~~~~-i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~---~~~~~~- 297 (468)
++.. ++++ ++.++ ++||||||||.+|+.+|.++|++|+++|++++................ ..-+.+
T Consensus 108 ~~~~~~~~l~~~----lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 183 (339)
T PRK07581 108 NVRAQHRLLTEK----FGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTADPAFN 183 (339)
T ss_pred HHHHHHHHHHHH----hCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHhCCCCC
Confidence 6665 4444 44557 579999999999999999999999999999875532110000000000 000000
Q ss_pred --HH-----hhHHHHhhhhcCChhhHHHHhh--ccCCC---hhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHH
Q 012190 298 --LH-----CAVPYLLSYVMGDPIKMAMVNI--ENRLP---PRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLK 365 (468)
Q Consensus 298 --~~-----~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 365 (468)
.. ..................+... ..... .+........ ..............+..+.
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~l~~~~ 253 (339)
T PRK07581 184 GGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWE----------GNFLPRDPNNLLAMLWTWQ 253 (339)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHH----------HhhcccCcccHHHHHHHhh
Confidence 00 0000000000000000000000 00000 0000000000 0000011122222111111
Q ss_pred HH--------hHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCC-CCccccccCcHHHHHHHHhc
Q 012190 366 SA--------SAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKD-NGHTLLLEEGISLLTIIKGT 436 (468)
Q Consensus 366 ~~--------~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~-aGH~~~~e~p~~~~~~I~~~ 436 (468)
.. .......+.++++|+|+|+|++|..+|++ ..+.+.+.+++++++++++ +||+.++|+|++++..|.
T Consensus 254 ~~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~-~~~~l~~~ip~a~l~~i~~~~GH~~~~~~~~~~~~~~~-- 330 (339)
T PRK07581 254 RGDISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPE-DCEAEAALIPNAELRPIESIWGHLAGFGQNPADIAFID-- 330 (339)
T ss_pred hcccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHH-HHHHHHHhCCCCeEEEeCCCCCccccccCcHHHHHHHH--
Confidence 10 01234567889999999999999999999 7899999999999999998 999999999999999999
Q ss_pred Ccccc
Q 012190 437 CKYRR 441 (468)
Q Consensus 437 ~F~~r 441 (468)
+|+++
T Consensus 331 ~~~~~ 335 (339)
T PRK07581 331 AALKE 335 (339)
T ss_pred HHHHH
Confidence 56543
|
|
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.7e-24 Score=210.65 Aligned_cols=255 Identities=15% Similarity=0.143 Sum_probs=148.3
Q ss_pred eeecCCCCCCCCCCeEEEeCCCCCchh------------hHHHhHh---hh-cCCeEEEEecCCCCCCC-----ChHHHH
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGIDGLGL------------GLILHHK---PL-GKAFEVRCLHIPVYDRT-----PFEGLV 225 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~~s~~------------~~~~~~~---~L-~~~~~V~~~D~~G~G~S-----s~~~~~ 225 (468)
++|...|. +++++||+||+.++.. .|.+++. .| +++|+|+++|+||||.| ++++++
T Consensus 48 l~y~~~G~---~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~~~~~~~~a 124 (343)
T PRK08775 48 LRYELIGP---AGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLDVPIDTADQA 124 (343)
T ss_pred EEEEEecc---CCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCCCCCCHHHHH
Confidence 56776774 2334666666655554 6888886 57 57899999999999977 478899
Q ss_pred HHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhh---Cchh---HH
Q 012190 226 KFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKA---MPDE---LH 299 (468)
Q Consensus 226 ~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~---~~~~---~~ 299 (468)
+++.+++++++.. +.++|+||||||++|+.+|.++|++|.++|++++........ ......... .... ..
T Consensus 125 ~dl~~ll~~l~l~---~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 200 (343)
T PRK08775 125 DAIALLLDALGIA---RLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYA-AAWRALQRRAVALGQLQCAEK 200 (343)
T ss_pred HHHHHHHHHcCCC---cceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHH-HHHHHHHHHHHHcCCCCCCch
Confidence 9999999985321 235799999999999999999999999999999864321100 000000000 0000 00
Q ss_pred h--hHHHHhhh-hcCChhhHHHHhhccCCC---h--hHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHH
Q 012190 300 C--AVPYLLSY-VMGDPIKMAMVNIENRLP---P--RIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYA 371 (468)
Q Consensus 300 ~--~~~~~~~~-~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 371 (468)
. ........ ....+..+ ......... . ......+.... ............... ...... ..
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~---~~~~~~-~~ 269 (343)
T PRK08775 201 HGLALARQLAMLSYRTPEEF-EERFDAPPEVINGRVRVAAEDYLDAA------GAQYVARTPVNAYLR---LSESID-LH 269 (343)
T ss_pred hHHHHHHHHHHHHcCCHHHH-HHHhCCCccccCCCccchHHHHHHHH------HHHHHHhcChhHHHH---HHHHHh-hc
Confidence 0 00000000 00000000 000000000 0 00000000000 000000001111111 010000 00
Q ss_pred hhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhC-CCcEEEEeCC-CCccccccCcHHHHHHHHhcCccccc
Q 012190 372 NSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSL-QNCIVRNFKD-NGHTLLLEEGISLLTIIKGTCKYRRS 442 (468)
Q Consensus 372 ~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l-~~~~~~~i~~-aGH~~~~e~p~~~~~~I~~~~F~~r~ 442 (468)
...+.++++|+|+|+|++|.++|++ ..+.+.+.+ ++++++++++ +||++++|+|++|++.|. .|+.+.
T Consensus 270 ~~~l~~I~~PtLvi~G~~D~~~p~~-~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~--~FL~~~ 339 (343)
T PRK08775 270 RVDPEAIRVPTVVVAVEGDRLVPLA-DLVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILT--TALRST 339 (343)
T ss_pred CCChhcCCCCeEEEEeCCCEeeCHH-HHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHH--HHHHhc
Confidence 1246789999999999999999988 688888887 6999999985 999999999999999999 677653
|
|
| >TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Probab=99.91 E-value=7e-23 Score=196.31 Aligned_cols=240 Identities=20% Similarity=0.213 Sum_probs=139.2
Q ss_pred CCeEEEeCCCCCchh-hHHHhHhhhcC-CeEEEEecCCCCCCCC----------hHHHHHHHHHHHHHHhhcCCCCcEEE
Q 012190 179 SPTLLFLPGIDGLGL-GLILHHKPLGK-AFEVRCLHIPVYDRTP----------FEGLVKFVEETVRREHASSPEKPIYL 246 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~-~~~~~~~~L~~-~~~V~~~D~~G~G~Ss----------~~~~~~dl~~~i~~~~~~~~~~~i~L 246 (468)
+++|||+||++++.. .|..+...+.+ +|+|+++|+||||.|+ ++++++++.++++++ ..+++++
T Consensus 25 ~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l 100 (288)
T TIGR01250 25 KIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKL----GLDKFYL 100 (288)
T ss_pred CCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHc----CCCcEEE
Confidence 678999999866655 44555556654 7999999999999873 567888888888874 4457999
Q ss_pred EEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhh-hcCChh-hHHHHhhc--
Q 012190 247 VGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSY-VMGDPI-KMAMVNIE-- 322 (468)
Q Consensus 247 vGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~-- 322 (468)
+||||||.+++.+|.++|++++++|++++........ .........++......+...... ...++. ........
T Consensus 101 iG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (288)
T TIGR01250 101 LGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYV-KELNRLRKELPPEVRAAIKRCEASGDYDNPEYQEAVEVFYHH 179 (288)
T ss_pred EEeehHHHHHHHHHHhCccccceeeEecccccchHHH-HHHHHHHhhcChhHHHHHHHHHhccCcchHHHHHHHHHHHHH
Confidence 9999999999999999999999999998754221100 000000111111000000000000 000000 00000000
Q ss_pred ----cCCChhHHhhhhhhhcchhcchhhhhhccC-CcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHH
Q 012190 323 ----NRLPPRIKLEQLSNNLPALLPRLSVMSDII-PKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSED 397 (468)
Q Consensus 323 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~ 397 (468)
....+.. ...+..... ......+ ....+.. ...+ ........+.++++|+++++|++|.+ ++.
T Consensus 180 ~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~~~~~~~~-~~~~--~~~~~~~~l~~i~~P~lii~G~~D~~-~~~- 247 (288)
T TIGR01250 180 LLCRTRKWPEA-LKHLKSGMN------TNVYNIMQGPNEFTI-TGNL--KDWDITDKLSEIKVPTLLTVGEFDTM-TPE- 247 (288)
T ss_pred hhcccccchHH-HHHHhhccC------HHHHhcccCCccccc-cccc--cccCHHHHhhccCCCEEEEecCCCcc-CHH-
Confidence 0000000 000000000 0000000 0000000 0000 00112345678999999999999985 556
Q ss_pred HHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHh
Q 012190 398 EAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (468)
Q Consensus 398 ~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~ 435 (468)
..+.+.+.++++++++++++||++++|+|+++++.|.+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 285 (288)
T TIGR01250 248 AAREMQELIAGSRLVVFPDGSHMTMIEDPEVYFKLLSD 285 (288)
T ss_pred HHHHHHHhccCCeEEEeCCCCCCcccCCHHHHHHHHHH
Confidence 68889999999999999999999999999999999983
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase |
| >PRK00175 metX homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.9e-23 Score=207.04 Aligned_cols=263 Identities=14% Similarity=0.141 Sum_probs=157.3
Q ss_pred eeecCCCCCC-CCCCeEEEeCCCCCchhh-------------HHHhHh---hh-cCCeEEEEecCCCC-CCC--------
Q 012190 167 FCPVDCGRPL-KGSPTLLFLPGIDGLGLG-------------LILHHK---PL-GKAFEVRCLHIPVY-DRT-------- 219 (468)
Q Consensus 167 ~~y~~~g~~~-~~~p~lV~lHG~~~s~~~-------------~~~~~~---~L-~~~~~V~~~D~~G~-G~S-------- 219 (468)
++|...|.+. .++|+|||+||++++... |..++. .| .++|+|+++|+||+ |.|
T Consensus 35 ~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~ 114 (379)
T PRK00175 35 LAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINP 114 (379)
T ss_pred EEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCC
Confidence 5677777542 236899999999999984 666652 44 78999999999983 322
Q ss_pred -------------ChHHHHHHHHHHHHHHhhcCCCCc-EEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCc-
Q 012190 220 -------------PFEGLVKFVEETVRREHASSPEKP-IYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQL- 284 (468)
Q Consensus 220 -------------s~~~~~~dl~~~i~~~~~~~~~~~-i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~- 284 (468)
+++++++++.+++++++ .++ ++++||||||.+++.+|.++|++|+++|++++.........
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~----~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 190 (379)
T PRK00175 115 DTGKPYGSDFPVITIRDWVRAQARLLDALG----ITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQNIA 190 (379)
T ss_pred CCCCcccCCCCcCCHHHHHHHHHHHHHHhC----CCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHHHH
Confidence 37799999999999854 346 58999999999999999999999999999998653321100
Q ss_pred -Cc-chHHHhhCchh-------------HHhhHHHHhhh-hcCChhhHHHHhhccCCCh---------hHHhhhhhhhcc
Q 012190 285 -QP-LFPILKAMPDE-------------LHCAVPYLLSY-VMGDPIKMAMVNIENRLPP---------RIKLEQLSNNLP 339 (468)
Q Consensus 285 -~~-~~~~~~~~~~~-------------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~ 339 (468)
.. ........+.+ .......+... ......... ..+...... ....+.+....
T Consensus 191 ~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~-~~f~~~~~~~~~~~~~~~~~~~~~~l~~~- 268 (379)
T PRK00175 191 FNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELD-EKFGRELQSGELPFGFDVEFQVESYLRYQ- 268 (379)
T ss_pred HHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHH-hhcCccccccccccCCCccchHHHHHHHH-
Confidence 00 00000000000 00000000000 000000000 000000000 00000000000
Q ss_pred hhcchhhhhhccCCcchhHHHHHHHHHHh------HHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCc----
Q 012190 340 ALLPRLSVMSDIIPKDTLLWKLKLLKSAS------AYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNC---- 409 (468)
Q Consensus 340 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~------~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~---- 409 (468)
..........+........+...+ ......+.+|++|+|+|+|++|.++|++ ..+.+.+.++++
T Consensus 269 -----~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~-~~~~la~~i~~a~~~~ 342 (379)
T PRK00175 269 -----GDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPA-RSREIVDALLAAGADV 342 (379)
T ss_pred -----HHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHH-HHHHHHHHHHhcCCCe
Confidence 000011112222222222222211 1134677899999999999999999999 799999999877
Q ss_pred EEEEeC-CCCccccccCcHHHHHHHHhcCcccccC
Q 012190 410 IVRNFK-DNGHTLLLEEGISLLTIIKGTCKYRRSR 443 (468)
Q Consensus 410 ~~~~i~-~aGH~~~~e~p~~~~~~I~~~~F~~r~~ 443 (468)
++++++ ++||++++|+|+++++.|. .|+++..
T Consensus 343 ~l~~i~~~~GH~~~le~p~~~~~~L~--~FL~~~~ 375 (379)
T PRK00175 343 SYAEIDSPYGHDAFLLDDPRYGRLVR--AFLERAA 375 (379)
T ss_pred EEEEeCCCCCchhHhcCHHHHHHHHH--HHHHhhh
Confidence 777775 8999999999999999999 7887644
|
|
| >PLN02652 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.9e-22 Score=201.56 Aligned_cols=237 Identities=19% Similarity=0.226 Sum_probs=151.6
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCCC--------hHHHHHHHHHHHHHHhhcCCCCcEEEEE
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTP--------FEGLVKFVEETVRREHASSPEKPIYLVG 248 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss--------~~~~~~dl~~~i~~~~~~~~~~~i~LvG 248 (468)
..++|||+||++++...|..++..| .++|+|+++|+||||.|+ ++++++|+.++++.+....+..+++++|
T Consensus 135 ~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG 214 (395)
T PLN02652 135 MRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSENPGVPCFLFG 214 (395)
T ss_pred CceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 3678999999999998999999999 578999999999999873 5678899999999988766667899999
Q ss_pred eChhHHHHHHHHHhCCC---CceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCC
Q 012190 249 DSFGGCLALAVAARNPT---IDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRL 325 (468)
Q Consensus 249 hS~GG~ia~~~a~~~P~---~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (468)
|||||.+++.++. +|+ +++++|+.+|........ +.............+.+. ....... ......
T Consensus 215 hSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~-----~~~~~~~~l~~~~~p~~~-~~~~~~~-----~~~~s~ 282 (395)
T PLN02652 215 HSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAH-----PIVGAVAPIFSLVAPRFQ-FKGANKR-----GIPVSR 282 (395)
T ss_pred ECHHHHHHHHHHh-ccCcccccceEEEECcccccccch-----HHHHHHHHHHHHhCCCCc-ccCcccc-----cCCcCC
Confidence 9999999997664 564 899999999875332110 111000000000000000 0000000 000000
Q ss_pred ChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHh
Q 012190 326 PPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNS 405 (468)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~ 405 (468)
++......+.+.+. . .......+....+. ........+.++++|+|+++|++|.++|++ .++.+++.
T Consensus 283 ~~~~~~~~~~dp~~---------~--~g~i~~~~~~~~~~-~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~-~a~~l~~~ 349 (395)
T PLN02652 283 DPAALLAKYSDPLV---------Y--TGPIRVRTGHEILR-ISSYLTRNFKSVTVPFMVLHGTADRVTDPL-ASQDLYNE 349 (395)
T ss_pred CHHHHHHHhcCCCc---------c--cCCchHHHHHHHHH-HHHHHHhhcccCCCCEEEEEeCCCCCCCHH-HHHHHHHh
Confidence 00000000000000 0 00001111111111 112234667889999999999999999999 68988887
Q ss_pred CC--CcEEEEeCCCCcccccc-CcHHHHHHHHhcCcccc
Q 012190 406 LQ--NCIVRNFKDNGHTLLLE-EGISLLTIIKGTCKYRR 441 (468)
Q Consensus 406 l~--~~~~~~i~~aGH~~~~e-~p~~~~~~I~~~~F~~r 441 (468)
++ +++++++++++|.+++| +++++.+.|. +|+++
T Consensus 350 ~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~--~FL~~ 386 (395)
T PLN02652 350 AASRHKDIKLYDGFLHDLLFEPEREEVGRDII--DWMEK 386 (395)
T ss_pred cCCCCceEEEECCCeEEeccCCCHHHHHHHHH--HHHHH
Confidence 65 47899999999999887 7899999999 45554
|
|
| >PLN02894 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.7e-22 Score=200.97 Aligned_cols=247 Identities=18% Similarity=0.141 Sum_probs=142.8
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCCh--------H----HHHHHHHHHHHHHhhcCCCCcEE
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTPF--------E----GLVKFVEETVRREHASSPEKPIY 245 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss~--------~----~~~~dl~~~i~~~~~~~~~~~i~ 245 (468)
++|+|||+||++++...|...+..|.++|+|+++|+||||.|+. + .+++++.++++. .+.++++
T Consensus 104 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~----l~~~~~~ 179 (402)
T PLN02894 104 DAPTLVMVHGYGASQGFFFRNFDALASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKA----KNLSNFI 179 (402)
T ss_pred CCCEEEEECCCCcchhHHHHHHHHHHhCCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHH----cCCCCeE
Confidence 57899999999999999999999998889999999999998841 1 234455555554 3455899
Q ss_pred EEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhH---------HHHhhhhcCC--h-
Q 012190 246 LVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAV---------PYLLSYVMGD--P- 313 (468)
Q Consensus 246 LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~--~- 313 (468)
|+||||||.+|+.+|.++|++++++|+++|.......... ................ +.......+. +
T Consensus 180 lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gp~~~~ 258 (402)
T PLN02894 180 LLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDK-SEWLTKFRATWKGAVLNHLWESNFTPQKIIRGLGPWGPN 258 (402)
T ss_pred EEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchh-HHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhccchhHH
Confidence 9999999999999999999999999999986533221100 0000000000000000 0000000000 0
Q ss_pred hhHH-H-HhhccC-----CChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHH----HHhHHHhhhcccCCceE
Q 012190 314 IKMA-M-VNIENR-----LPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLK----SASAYANSRLHAVKAEV 382 (468)
Q Consensus 314 ~~~~-~-~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~l~~i~~Pv 382 (468)
+... . ...... .+.+. ...+.+.+ .... .....-...+..+. .........+..+++|+
T Consensus 259 l~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~-------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~ 328 (402)
T PLN02894 259 LVRRYTTARFGAHSTGDILSEEE-SKLLTDYV-------YHTL--AAKASGELCLKYIFSFGAFARKPLLESASEWKVPT 328 (402)
T ss_pred HHHHHHHHHhhhcccccccCcch-hhHHHHHH-------HHhh--cCCCchHHHHHHhccCchhhcchHhhhcccCCCCE
Confidence 0000 0 000000 00000 00000000 0000 00000000001110 01122235678899999
Q ss_pred EEEEeCCCCCCCcHHHHHHHHHhCC-CcEEEEeCCCCccccccCcHHHHHHHHhc--Ccccc
Q 012190 383 LVLASGKDNMLPSEDEAKRLNNSLQ-NCIVRNFKDNGHTLLLEEGISLLTIIKGT--CKYRR 441 (468)
Q Consensus 383 LlI~G~~D~~v~~~~~~~~l~~~l~-~~~~~~i~~aGH~~~~e~p~~~~~~I~~~--~F~~r 441 (468)
++|+|++|.+.+ . ..+.+.+..+ .+++++++++||++++|+|++|++.|.+. .|+++
T Consensus 329 liI~G~~D~i~~-~-~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~~~ 388 (402)
T PLN02894 329 TFIYGRHDWMNY-E-GAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYLSP 388 (402)
T ss_pred EEEEeCCCCCCc-H-HHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhccC
Confidence 999999998776 4 3556666554 68999999999999999999999999954 44444
|
|
| >COG2267 PldB Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-22 Score=195.22 Aligned_cols=260 Identities=20% Similarity=0.197 Sum_probs=163.6
Q ss_pred CccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCCC---------hHHH
Q 012190 155 EIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTP---------FEGL 224 (468)
Q Consensus 155 ~~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss---------~~~~ 224 (468)
.+...||...++........ ...+||++||++.+..-|..++..| ..||.|+++|+||||.|. +.++
T Consensus 13 ~~~~~d~~~~~~~~~~~~~~---~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~ 89 (298)
T COG2267 13 YFTGADGTRLRYRTWAAPEP---PKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADY 89 (298)
T ss_pred eeecCCCceEEEEeecCCCC---CCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHH
Confidence 34455666633333332222 2368999999999999999999999 789999999999999995 8999
Q ss_pred HHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHH
Q 012190 225 VKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPY 304 (468)
Q Consensus 225 ~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (468)
.+|+..+++......+..+++|+||||||.|++.++.+++..++++||.+|...... ...................+
T Consensus 90 ~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~--~~~~~~~~~~~~~~~~~~~p- 166 (298)
T COG2267 90 VDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGG--AILRLILARLALKLLGRIRP- 166 (298)
T ss_pred HHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCCh--hHHHHHHHHHhccccccccc-
Confidence 999999999988766788999999999999999999999999999999999886653 00000000000000000011
Q ss_pred HhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEE
Q 012190 305 LLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLV 384 (468)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLl 384 (468)
.+..+. ...........+. .+...+.+.. .+.+ ........|....+.............+++|+|+
T Consensus 167 ---~~~~~~-~~~~~~~~~~~sr---~~~~~~~~~~----dP~~--~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLl 233 (298)
T COG2267 167 ---KLPVDS-NLLEGVLTDDLSR---DPAEVAAYEA----DPLI--GVGGPVSRWVDLALLAGRVPALRDAPAIALPVLL 233 (298)
T ss_pred ---ccccCc-ccccCcCcchhhc---CHHHHHHHhc----CCcc--ccCCccHHHHHHHHHhhcccchhccccccCCEEE
Confidence 000000 0000000000000 0111110000 0000 0122333443333333331223445788999999
Q ss_pred EEeCCCCCCC-cHHHHHHHHHhCC--CcEEEEeCCCCccccccCcH---HHHHHHH
Q 012190 385 LASGKDNMLP-SEDEAKRLNNSLQ--NCIVRNFKDNGHTLLLEEGI---SLLTIIK 434 (468)
Q Consensus 385 I~G~~D~~v~-~~~~~~~l~~~l~--~~~~~~i~~aGH~~~~e~p~---~~~~~I~ 434 (468)
++|++|++++ .+ ...++.+... ++++++++|+.|.++.|.+. ++.+.+.
T Consensus 234 l~g~~D~vv~~~~-~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~ 288 (298)
T COG2267 234 LQGGDDRVVDNVE-GLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDIL 288 (298)
T ss_pred EecCCCccccCcH-HHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHH
Confidence 9999999999 67 5777776664 67899999999999999665 4444444
|
|
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.6e-22 Score=193.58 Aligned_cols=232 Identities=14% Similarity=0.173 Sum_probs=144.3
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhc-CCeEEEEecCCCCCCC--------ChHHHHHHHHHHHHHHhhcCCCCcEEEEE
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSPEKPIYLVG 248 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~-~~~~V~~~D~~G~G~S--------s~~~~~~dl~~~i~~~~~~~~~~~i~LvG 248 (468)
++|+|||+||++++...|.++...|. .+|+|+++|+||||.| +++++++++.++++.+. ..++++|+|
T Consensus 17 ~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~---~~~~v~lvG 93 (273)
T PLN02211 17 QPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSLP---ENEKVILVG 93 (273)
T ss_pred CCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhcC---CCCCEEEEE
Confidence 47899999999999999999999995 5899999999999965 57888888888888742 246899999
Q ss_pred eChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcC-ChhhHHHHhhccCCCh
Q 012190 249 DSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMG-DPIKMAMVNIENRLPP 327 (468)
Q Consensus 249 hS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 327 (468)
|||||.+++.++.++|++|+++|++++.... .............+.... ....+..... .+... ........
T Consensus 94 hS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~--~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~---~~~~~~~~ 166 (273)
T PLN02211 94 HSAGGLSVTQAIHRFPKKICLAVYVAATMLK--LGFQTDEDMKDGVPDLSE--FGDVYELGFGLGPDQP---PTSAIIKK 166 (273)
T ss_pred ECchHHHHHHHHHhChhheeEEEEeccccCC--CCCCHHHHHhccccchhh--hccceeeeeccCCCCC---CceeeeCH
Confidence 9999999999999999999999999774321 110000001000000000 0000000000 00000 00000000
Q ss_pred hHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHH-----HH-hHHHhhhcccC-CceEEEEEeCCCCCCCcHHHHH
Q 012190 328 RIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLK-----SA-SAYANSRLHAV-KAEVLVLASGKDNMLPSEDEAK 400 (468)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----~~-~~~~~~~l~~i-~~PvLlI~G~~D~~v~~~~~~~ 400 (468)
+....+... ..+.+...+....+. .. .........++ ++|+++|.|++|..+|++ ..+
T Consensus 167 -~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~-~~~ 231 (273)
T PLN02211 167 -EFRRKILYQ-------------MSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPE-QQE 231 (273)
T ss_pred -HHHHHHHhc-------------CCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCHH-HHH
Confidence 000000000 000000000000000 00 00001122344 789999999999999999 799
Q ss_pred HHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHh
Q 012190 401 RLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (468)
Q Consensus 401 ~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~ 435 (468)
.+.+.+++.+++.++ +||.+++++|++++++|.+
T Consensus 232 ~m~~~~~~~~~~~l~-~gH~p~ls~P~~~~~~i~~ 265 (273)
T PLN02211 232 AMIKRWPPSQVYELE-SDHSPFFSTPFLLFGLLIK 265 (273)
T ss_pred HHHHhCCccEEEEEC-CCCCccccCHHHHHHHHHH
Confidence 999999989999997 8999999999999999984
|
|
| >KOG1455 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.7e-22 Score=181.90 Aligned_cols=226 Identities=19% Similarity=0.212 Sum_probs=156.0
Q ss_pred CCCeEEEeCCCCCch-hhHHHhHhhh-cCCeEEEEecCCCCCCC--------ChHHHHHHHHHHHHHHh--hcCCCCcEE
Q 012190 178 GSPTLLFLPGIDGLG-LGLILHHKPL-GKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREH--ASSPEKPIY 245 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~-~~~~~~~~~L-~~~~~V~~~D~~G~G~S--------s~~~~~~dl~~~i~~~~--~~~~~~~i~ 245 (468)
....|+++||++... ..|..++..| ..+|.|+++|++|||.| +++..++|+..+++... .+..+.+.+
T Consensus 53 pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~F 132 (313)
T KOG1455|consen 53 PRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRF 132 (313)
T ss_pred CceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCCee
Confidence 355899999999987 5777788888 67899999999999999 48999999999999744 445678999
Q ss_pred EEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHh--------hhhcCChhhHH
Q 012190 246 LVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLL--------SYVMGDPIKMA 317 (468)
Q Consensus 246 LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 317 (468)
|+||||||++++.++.++|+..+|+|+++|........-... ....+...+...+|.+. .....++.
T Consensus 133 L~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p--~v~~~l~~l~~liP~wk~vp~~d~~~~~~kdp~--- 207 (313)
T KOG1455|consen 133 LFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHP--PVISILTLLSKLIPTWKIVPTKDIIDVAFKDPE--- 207 (313)
T ss_pred eeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCc--HHHHHHHHHHHhCCceeecCCccccccccCCHH---
Confidence 999999999999999999999999999999875544322111 11111112222222221 11111111
Q ss_pred HHhhccCCChhHHhhhhhhhcchhcchhhhhhccCC-cchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcH
Q 012190 318 MVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIP-KDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSE 396 (468)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~ 396 (468)
..+....+- ..+. ...+.....++ ....++.+.+.++.+|.+++||+.|.++.+.
T Consensus 208 ------------~r~~~~~np-----------l~y~g~pRl~T~~ElL-r~~~~le~~l~~vtvPflilHG~dD~VTDp~ 263 (313)
T KOG1455|consen 208 ------------KRKILRSDP-----------LCYTGKPRLKTAYELL-RVTADLEKNLNEVTVPFLILHGTDDKVTDPK 263 (313)
T ss_pred ------------HHHHhhcCC-----------ceecCCccHHHHHHHH-HHHHHHHHhcccccccEEEEecCCCcccCcH
Confidence 011111100 0011 11222222333 3334456788999999999999999999999
Q ss_pred HHHHHHHHhCC--CcEEEEeCCCCccccc-cCcHHHHHHH
Q 012190 397 DEAKRLNNSLQ--NCIVRNFKDNGHTLLL-EEGISLLTII 433 (468)
Q Consensus 397 ~~~~~l~~~l~--~~~~~~i~~aGH~~~~-e~p~~~~~~I 433 (468)
.++.+++..+ ++++.++||.-|.++. |.++.+....
T Consensus 264 -~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf 302 (313)
T KOG1455|consen 264 -VSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVF 302 (313)
T ss_pred -HHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHH
Confidence 6999998875 8899999999999998 4444444333
|
|
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.3e-22 Score=231.73 Aligned_cols=254 Identities=16% Similarity=0.155 Sum_probs=161.4
Q ss_pred CCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCC---------------hHHHHH
Q 012190 162 GPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP---------------FEGLVK 226 (468)
Q Consensus 162 ~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss---------------~~~~~~ 226 (468)
+...|++|.+.|.. +++|+|||+||++++...|.+++..|.+.|+|+++|+||||.|+ ++++++
T Consensus 1355 ~~~~~i~~~~~G~~-~~~~~vVllHG~~~s~~~w~~~~~~L~~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~ 1433 (1655)
T PLN02980 1355 GFSCLIKVHEVGQN-AEGSVVLFLHGFLGTGEDWIPIMKAISGSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVAD 1433 (1655)
T ss_pred ceEEEEEEEecCCC-CCCCeEEEECCCCCCHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHH
Confidence 45678888877752 34689999999999999999999999888999999999999873 456778
Q ss_pred HHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHh-----h
Q 012190 227 FVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHC-----A 301 (468)
Q Consensus 227 dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 301 (468)
++.++++++ ..++++|+||||||.+++.+|.++|++|+++|++++.......... ............ .
T Consensus 1434 ~l~~ll~~l----~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~---~~~~~~~~~~~~~l~~~g 1506 (1655)
T PLN02980 1434 LLYKLIEHI----TPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVAR---KIRSAKDDSRARMLIDHG 1506 (1655)
T ss_pred HHHHHHHHh----CCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHH---HHHhhhhhHHHHHHHhhh
Confidence 888888773 4569999999999999999999999999999999875432211100 000000000000 0
Q ss_pred HHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHH-HHhHHHhhhcccCCc
Q 012190 302 VPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLK-SASAYANSRLHAVKA 380 (468)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~l~~i~~ 380 (468)
.............. .. ....+ ...+.+...+ .......+...+..+. .......+.+.++++
T Consensus 1507 ~~~~~~~~~~~~~~---~~--~~~~~-~~~~~~~~~~-----------~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~ 1569 (1655)
T PLN02980 1507 LEIFLENWYSGELW---KS--LRNHP-HFNKIVASRL-----------LHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDT 1569 (1655)
T ss_pred HHHHHHHhccHHHh---hh--hccCH-HHHHHHHHHH-----------hcCCHHHHHHHHHHhhhcccchHHHHHhhCCC
Confidence 00000000000000 00 00000 0000000000 0000111111111111 011223356789999
Q ss_pred eEEEEEeCCCCCCCcHHHHHHHHHhCCC------------cEEEEeCCCCccccccCcHHHHHHHHhcCcccccCC
Q 012190 381 EVLVLASGKDNMLPSEDEAKRLNNSLQN------------CIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSRK 444 (468)
Q Consensus 381 PvLlI~G~~D~~v~~~~~~~~l~~~l~~------------~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r~~~ 444 (468)
|+|+|+|++|..++ . .++++.+.+++ +++++++++||++++|+|+++++.|. .|+++..+
T Consensus 1570 PtLlI~Ge~D~~~~-~-~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~--~FL~~~~~ 1641 (1655)
T PLN02980 1570 PLLLVVGEKDVKFK-Q-IAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALR--KFLTRLHN 1641 (1655)
T ss_pred CEEEEEECCCCccH-H-HHHHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHH--HHHHhccc
Confidence 99999999999875 4 46777777765 48999999999999999999999999 78887654
|
|
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.5e-22 Score=199.31 Aligned_cols=240 Identities=21% Similarity=0.224 Sum_probs=150.9
Q ss_pred eeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC-------ChHHHHHHHHHHHHHHhhcC
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHASS 239 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-------s~~~~~~dl~~~i~~~~~~~ 239 (468)
++|...|. .++|+|||+||++++...|..+...|.++|+|+++|+||||.| +++++++++.++++. .
T Consensus 121 i~~~~~g~--~~~~~vl~~HG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~----~ 194 (371)
T PRK14875 121 VRYLRLGE--GDGTPVVLIHGFGGDLNNWLFNHAALAAGRPVIALDLPGHGASSKAVGAGSLDELAAAVLAFLDA----L 194 (371)
T ss_pred EEEecccC--CCCCeEEEECCCCCccchHHHHHHHHhcCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHh----c
Confidence 35555554 2468999999999999999999999988899999999999988 478889999888887 4
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHH
Q 012190 240 PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMV 319 (468)
Q Consensus 240 ~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (468)
+..+++|+||||||.+++.+|.++|+++.++|+++|......... .....+... .....+..++.....++.
T Consensus 195 ~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~----- 266 (371)
T PRK14875 195 GIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEING-DYIDGFVAA--ESRRELKPVLELLFADPA----- 266 (371)
T ss_pred CCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccch-hHHHHhhcc--cchhHHHHHHHHHhcChh-----
Confidence 445899999999999999999999999999999987642211100 000000000 000001111111111110
Q ss_pred hhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHH---HhHHHhhhcccCCceEEEEEeCCCCCCCcH
Q 012190 320 NIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKS---ASAYANSRLHAVKAEVLVLASGKDNMLPSE 396 (468)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~ 396 (468)
..... ....+..... .. .....+......... ........+.++++|+|+++|++|.++|+.
T Consensus 267 ----~~~~~-~~~~~~~~~~-----~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~ 331 (371)
T PRK14875 267 ----LVTRQ-MVEDLLKYKR-----LD-----GVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAA 331 (371)
T ss_pred ----hCCHH-HHHHHHHHhc-----cc-----cHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHH
Confidence 00000 0000000000 00 000000000000000 001122356788999999999999999987
Q ss_pred HHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 397 DEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 397 ~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
..+.+ .+++++.+++++||++++++|+++++.|. .|+++
T Consensus 332 -~~~~l---~~~~~~~~~~~~gH~~~~e~p~~~~~~i~--~fl~~ 370 (371)
T PRK14875 332 -HAQGL---PDGVAVHVLPGAGHMPQMEAAADVNRLLA--EFLGK 370 (371)
T ss_pred -HHhhc---cCCCeEEEeCCCCCChhhhCHHHHHHHHH--HHhcc
Confidence 45543 34689999999999999999999999998 55543
|
|
| >PLN02511 hydrolase | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.4e-22 Score=199.66 Aligned_cols=270 Identities=12% Similarity=0.138 Sum_probs=154.7
Q ss_pred cCccCCCCCCc--eeeeecCCCCCCCCCCeEEEeCCCCCchh-hH-HHhHhhh-cCCeEEEEecCCCCCCCC-------h
Q 012190 154 KEIIKPDGGPP--RWFCPVDCGRPLKGSPTLLFLPGIDGLGL-GL-ILHHKPL-GKAFEVRCLHIPVYDRTP-------F 221 (468)
Q Consensus 154 ~~~~~~dg~~~--~~~~y~~~g~~~~~~p~lV~lHG~~~s~~-~~-~~~~~~L-~~~~~V~~~D~~G~G~Ss-------~ 221 (468)
+.+..+||+.. .|...... ....++|+||++||++++.. .| ..++..+ .++|+|+++|+||||.|+ .
T Consensus 74 e~l~~~DG~~~~ldw~~~~~~-~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~~~ 152 (388)
T PLN02511 74 ECLRTPDGGAVALDWVSGDDR-ALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQFYS 152 (388)
T ss_pred EEEECCCCCEEEEEecCcccc-cCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcCEEc
Confidence 34567788763 34432111 11235789999999977654 34 4455544 789999999999999984 2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCC--ceEEEEeCCCCCCCCCCcCcchHHHhhCchhHH
Q 012190 222 EGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTI--DLILILSNPATSFGRSQLQPLFPILKAMPDELH 299 (468)
Q Consensus 222 ~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~--v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~ 299 (468)
..+++|+.++++++....+..+++++||||||.+++.++.++|+. +.++++++++....... ..+...+.....
T Consensus 153 ~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~----~~~~~~~~~~y~ 228 (388)
T PLN02511 153 ASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIAD----EDFHKGFNNVYD 228 (388)
T ss_pred CCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHH----HHHhccHHHHHH
Confidence 467889999999988877778999999999999999999999987 88888887654321000 000000000000
Q ss_pred hhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhcc-CCcchhHHHHHHHHHHhHHHhhhcccC
Q 012190 300 CAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDI-IPKDTLLWKLKLLKSASAYANSRLHAV 378 (468)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~l~~i 378 (468)
..+...+..+.... ...+.......... .+. ...........+... ....... ..+.. ......+.++
T Consensus 229 ~~~~~~l~~~~~~~-~~~~~~~~~~~~~~----~~~-~~~~~~~fd~~~t~~~~gf~~~~---~yy~~--~s~~~~L~~I 297 (388)
T PLN02511 229 KALAKALRKIFAKH-ALLFEGLGGEYNIP----LVA-NAKTVRDFDDGLTRVSFGFKSVD---AYYSN--SSSSDSIKHV 297 (388)
T ss_pred HHHHHHHHHHHHHH-HHHHhhCCCccCHH----HHH-hCCCHHHHHHhhhhhcCCCCCHH---HHHHH--cCchhhhccC
Confidence 00000000000000 00000000000000 000 000000000000000 0000000 00110 1123567899
Q ss_pred CceEEEEEeCCCCCCCcHHHH-HHHHHhCCCcEEEEeCCCCccccccCcHH------HHHHHHhcCccccc
Q 012190 379 KAEVLVLASGKDNMLPSEDEA-KRLNNSLQNCIVRNFKDNGHTLLLEEGIS------LLTIIKGTCKYRRS 442 (468)
Q Consensus 379 ~~PvLlI~G~~D~~v~~~~~~-~~l~~~l~~~~~~~i~~aGH~~~~e~p~~------~~~~I~~~~F~~r~ 442 (468)
++|+|+|+|++|+++|+. .. ..+.+.++++++++++++||..++|.|+. +.+.+. +|++..
T Consensus 298 ~vPtLiI~g~dDpi~p~~-~~~~~~~~~~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~--~Fl~~~ 365 (388)
T PLN02511 298 RVPLLCIQAANDPIAPAR-GIPREDIKANPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVM--EFLEAL 365 (388)
T ss_pred CCCeEEEEcCCCCcCCcc-cCcHhHHhcCCCEEEEECCCcceeccccCCCCCCCCccHHHHHH--HHHHHH
Confidence 999999999999999987 33 45677789999999999999999999875 467777 565543
|
|
| >COG1647 Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.7e-21 Score=167.42 Aligned_cols=213 Identities=17% Similarity=0.205 Sum_probs=150.1
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC-------ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeC
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S-------s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS 250 (468)
+..|+|+|||.|+....+.+.+.| .++|.|+++.+||||.. +.+||.+++.+..+++... +...|.++|-|
T Consensus 15 ~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~-gy~eI~v~GlS 93 (243)
T COG1647 15 NRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEA-GYDEIAVVGLS 93 (243)
T ss_pred CEEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHc-CCCeEEEEeec
Confidence 468999999999999999999999 77899999999999965 6899999999999988743 45689999999
Q ss_pred hhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHH
Q 012190 251 FGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIK 330 (468)
Q Consensus 251 ~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (468)
|||.+|+.+|.++| ++++|.+|++..... +.. ++..+..... . +..+ ...+.+..
T Consensus 94 mGGv~alkla~~~p--~K~iv~m~a~~~~k~--~~~---iie~~l~y~~----~-~kk~-------------e~k~~e~~ 148 (243)
T COG1647 94 MGGVFALKLAYHYP--PKKIVPMCAPVNVKS--WRI---IIEGLLEYFR----N-AKKY-------------EGKDQEQI 148 (243)
T ss_pred chhHHHHHHHhhCC--ccceeeecCCccccc--chh---hhHHHHHHHH----H-hhhc-------------cCCCHHHH
Confidence 99999999999998 899999988664211 111 1111110000 0 0000 11111111
Q ss_pred hhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC--C
Q 012190 331 LEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ--N 408 (468)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~--~ 408 (468)
.+++.. +. ++.......+..........+..|..|++++.|.+|+++|.+ .++.+.+... +
T Consensus 149 ~~e~~~---------------~~-~~~~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~-sA~~Iy~~v~s~~ 211 (243)
T COG1647 149 DKEMKS---------------YK-DTPMTTTAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAE-SANFIYDHVESDD 211 (243)
T ss_pred HHHHHH---------------hh-cchHHHHHHHHHHHHHHHhhhhhcccchhheecccCCCCCHH-HHHHHHHhccCCc
Confidence 111111 11 001111122223333345677899999999999999999999 6999988774 7
Q ss_pred cEEEEeCCCCccccccC-cHHHHHHHH
Q 012190 409 CIVRNFKDNGHTLLLEE-GISLLTIIK 434 (468)
Q Consensus 409 ~~~~~i~~aGH~~~~e~-p~~~~~~I~ 434 (468)
.++.+++++||.+..+. -+.+.+.+.
T Consensus 212 KeL~~~e~SgHVIt~D~Erd~v~e~V~ 238 (243)
T COG1647 212 KELKWLEGSGHVITLDKERDQVEEDVI 238 (243)
T ss_pred ceeEEEccCCceeecchhHHHHHHHHH
Confidence 79999999999998874 456666666
|
|
| >TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.8e-21 Score=186.18 Aligned_cols=113 Identities=20% Similarity=0.226 Sum_probs=86.6
Q ss_pred ccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCCC---------hHHHH
Q 012190 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTP---------FEGLV 225 (468)
Q Consensus 156 ~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss---------~~~~~ 225 (468)
+...||.. ++|...|.+ ++++|||+||++++...+ .....+ .++|+|+++|+||||.|+ .++++
T Consensus 9 ~~~~~~~~---l~y~~~g~~--~~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 82 (306)
T TIGR01249 9 LNVSDNHQ---LYYEQSGNP--DGKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLV 82 (306)
T ss_pred EEcCCCcE---EEEEECcCC--CCCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHH
Confidence 34445554 456666652 467899999988776543 333344 468999999999999883 45678
Q ss_pred HHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCC
Q 012190 226 KFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (468)
Q Consensus 226 ~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~ 278 (468)
+++..+++++ +.++++++||||||.+++.++.++|++++++|++++...
T Consensus 83 ~dl~~l~~~l----~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~ 131 (306)
T TIGR01249 83 ADIEKLREKL----GIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLL 131 (306)
T ss_pred HHHHHHHHHc----CCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccC
Confidence 8888888773 445899999999999999999999999999999987553
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. |
| >TIGR01607 PST-A Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.2e-21 Score=187.06 Aligned_cols=251 Identities=15% Similarity=0.147 Sum_probs=149.4
Q ss_pred cCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchh-hH-------------------------HHhHhhh-cCCeEEE
Q 012190 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGL-GL-------------------------ILHHKPL-GKAFEVR 209 (468)
Q Consensus 157 ~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~-~~-------------------------~~~~~~L-~~~~~V~ 209 (468)
...||...++..+.+. . .+.+|+++||++.+.. .+ ..+++.| .++|.|+
T Consensus 3 ~~~~g~~l~~~~~~~~-~---~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~ 78 (332)
T TIGR01607 3 RNKDGLLLKTYSWIVK-N---AIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVY 78 (332)
T ss_pred cCCCCCeEEEeeeecc-C---CeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEE
Confidence 3456665444443332 2 2568999999999986 22 3567888 7789999
Q ss_pred EecCCCCCCCC-----------hHHHHHHHHHHHHHHhh-------------------cCC-CCcEEEEEeChhHHHHHH
Q 012190 210 CLHIPVYDRTP-----------FEGLVKFVEETVRREHA-------------------SSP-EKPIYLVGDSFGGCLALA 258 (468)
Q Consensus 210 ~~D~~G~G~Ss-----------~~~~~~dl~~~i~~~~~-------------------~~~-~~~i~LvGhS~GG~ia~~ 258 (468)
++|+||||+|+ ++++++|+..+++.... ..+ +.|++|+||||||.+++.
T Consensus 79 ~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~ 158 (332)
T TIGR01607 79 GLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALR 158 (332)
T ss_pred EecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHH
Confidence 99999999773 67788899988887653 233 679999999999999999
Q ss_pred HHHhCCC--------CceEEEEeCCCCCCCCCCcC---cchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCCh
Q 012190 259 VAARNPT--------IDLILILSNPATSFGRSQLQ---PLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPP 327 (468)
Q Consensus 259 ~a~~~P~--------~v~~lVli~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (468)
++.++++ .++|+|+++|+......... ........+...+....+.+ ....... ....+
T Consensus 159 ~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~---~~~~~~~-------~~~~~ 228 (332)
T TIGR01607 159 LLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTF---RISKKIR-------YEKSP 228 (332)
T ss_pred HHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcc---cccCccc-------cccCh
Confidence 9987643 58999999987643211100 00000000000000000000 0000000 00000
Q ss_pred hHHhhhhhh-hcchhcchhhhhhccCC-cchhHHHHHHHHHHhHHHhhhcccC--CceEEEEEeCCCCCCCcHHHHHHHH
Q 012190 328 RIKLEQLSN-NLPALLPRLSVMSDIIP-KDTLLWKLKLLKSASAYANSRLHAV--KAEVLVLASGKDNMLPSEDEAKRLN 403 (468)
Q Consensus 328 ~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~l~~i--~~PvLlI~G~~D~~v~~~~~~~~l~ 403 (468)
.. .+.+.. .+. +. .-+..+....+.. .......+..+ ++|+|+|+|++|.+++++ ..+.+.
T Consensus 229 ~~-~~~~~~Dp~~------------~~~~~s~~~~~~l~~~-~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~-~~~~~~ 293 (332)
T TIGR01607 229 YV-NDIIKFDKFR------------YDGGITFNLASELIKA-TDTLDCDIDYIPKDIPILFIHSKGDCVCSYE-GTVSFY 293 (332)
T ss_pred hh-hhHHhcCccc------------cCCcccHHHHHHHHHH-HHHHHhhHhhCCCCCCEEEEEeCCCCccCHH-HHHHHH
Confidence 00 111110 000 00 1112222222221 11222334455 799999999999999999 688887
Q ss_pred HhC--CCcEEEEeCCCCccccccC-cHHHHHHHHhc
Q 012190 404 NSL--QNCIVRNFKDNGHTLLLEE-GISLLTIIKGT 436 (468)
Q Consensus 404 ~~l--~~~~~~~i~~aGH~~~~e~-p~~~~~~I~~~ 436 (468)
+.. ++++++++++++|.++.|. .+++.+.|.+|
T Consensus 294 ~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~w 329 (332)
T TIGR01607 294 NKLSISNKELHTLEDMDHVITIEPGNEEVLKKIIEW 329 (332)
T ss_pred HhccCCCcEEEEECCCCCCCccCCCHHHHHHHHHHH
Confidence 765 4789999999999999986 57788888754
|
These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. |
| >KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.4e-20 Score=176.17 Aligned_cols=243 Identities=17% Similarity=0.184 Sum_probs=159.8
Q ss_pred CCCCeEEEeCCCCCchhhHHHhHhhhcC--CeEEEEecCCCCCCC------ChHHHHHHHHHHHHHHhhcCCCCcEEEEE
Q 012190 177 KGSPTLLFLPGIDGLGLGLILHHKPLGK--AFEVRCLHIPVYDRT------PFEGLVKFVEETVRREHASSPEKPIYLVG 248 (468)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~~~~~~~L~~--~~~V~~~D~~G~G~S------s~~~~~~dl~~~i~~~~~~~~~~~i~LvG 248 (468)
...|+++++||+.|++..|+.+...|++ +..|+++|.|.||.| +.+.+++|+..+++..+......+++|+|
T Consensus 50 ~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l~G 129 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHNYEAMAEDVKLFIDGVGGSTRLDPVVLLG 129 (315)
T ss_pred CCCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCccccccCHHHHHHHHHHHHHHcccccccCCceecc
Confidence 3588999999999999999999999954 579999999999999 48999999999999976433456899999
Q ss_pred eChhH-HHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHH---hhCchh------HHhhHHHHhhhhcCChhhHHH
Q 012190 249 DSFGG-CLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPIL---KAMPDE------LHCAVPYLLSYVMGDPIKMAM 318 (468)
Q Consensus 249 hS~GG-~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~---~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 318 (468)
||||| .+++..+..+|+.+..+|+++-..............++ ...+.. .....+.+........
T Consensus 130 HsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d~~----- 204 (315)
T KOG2382|consen 130 HSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGFDNL----- 204 (315)
T ss_pred cCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHhcchH-----
Confidence 99999 88888888999999999998866531111111111111 111111 0111111111110000
Q ss_pred HhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhc--ccCCceEEEEEeCCCCCCCcH
Q 012190 319 VNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRL--HAVKAEVLVLASGKDNMLPSE 396 (468)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l--~~i~~PvLlI~G~~D~~v~~~ 396 (468)
..+-+..++.. ...-......++.+.+...+..+. ....+..+ .....|||++.|.++..++.+
T Consensus 205 -----------~~~fi~~nl~~-~~~~~s~~w~~nl~~i~~~~~~~~--~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~ 270 (315)
T KOG2382|consen 205 -----------VRQFILTNLKK-SPSDGSFLWRVNLDSIASLLDEYE--ILSYWADLEDGPYTGPVLFIKGLQSKFVPDE 270 (315)
T ss_pred -----------HHHHHHHhcCc-CCCCCceEEEeCHHHHHHHHHHHH--hhcccccccccccccceeEEecCCCCCcChh
Confidence 01111111110 000011111122222222222211 11112222 566899999999999999999
Q ss_pred HHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 397 DEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 397 ~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
...++.+.+|+++++.++++||++|.|+|+++.+.|.+ |+.+
T Consensus 271 -~~~~~~~~fp~~e~~~ld~aGHwVh~E~P~~~~~~i~~--Fl~~ 312 (315)
T KOG2382|consen 271 -HYPRMEKIFPNVEVHELDEAGHWVHLEKPEEFIESISE--FLEE 312 (315)
T ss_pred -HHHHHHHhccchheeecccCCceeecCCHHHHHHHHHH--Hhcc
Confidence 79999999999999999999999999999999999995 7655
|
|
| >PRK13604 luxD acyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.3e-20 Score=173.78 Aligned_cols=256 Identities=14% Similarity=0.087 Sum_probs=157.0
Q ss_pred cCCCCCCc-eeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCC-CCCC-------hHHHHH
Q 012190 157 IKPDGGPP-RWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVY-DRTP-------FEGLVK 226 (468)
Q Consensus 157 ~~~dg~~~-~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~-G~Ss-------~~~~~~ 226 (468)
...||..+ .|+.+..... .+..++||++||+++....+..+++.| .+||.|+.+|+||| |.|+ +.....
T Consensus 15 ~~~dG~~L~Gwl~~P~~~~-~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~t~s~g~~ 93 (307)
T PRK13604 15 CLENGQSIRVWETLPKENS-PKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEFTMSIGKN 93 (307)
T ss_pred EcCCCCEEEEEEEcCcccC-CCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccCcccccHH
Confidence 34556554 4555543211 234679999999999988899999999 77999999999988 8873 344577
Q ss_pred HHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHh
Q 012190 227 FVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLL 306 (468)
Q Consensus 227 dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (468)
|+..+++.+... ...++.|+||||||.+|+..|+.. .++++|+.+|..... ..+..........++
T Consensus 94 Dl~aaid~lk~~-~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l~--------d~l~~~~~~~~~~~p--- 159 (307)
T PRK13604 94 SLLTVVDWLNTR-GINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNLR--------DTLERALGYDYLSLP--- 159 (307)
T ss_pred HHHHHHHHHHhc-CCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccHH--------HHHHHhhhcccccCc---
Confidence 888888887764 456899999999999997777643 389999999866421 111100000000000
Q ss_pred hhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEE
Q 012190 307 SYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLA 386 (468)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~ 386 (468)
...-+....+ ...... ...+.+... . +..... ....+.+..+++|+|+||
T Consensus 160 --~~~lp~~~d~----~g~~l~--~~~f~~~~~----------~-~~~~~~-----------~s~i~~~~~l~~PvLiIH 209 (307)
T PRK13604 160 --IDELPEDLDF----EGHNLG--SEVFVTDCF----------K-HGWDTL-----------DSTINKMKGLDIPFIAFT 209 (307)
T ss_pred --cccccccccc----cccccc--HHHHHHHHH----------h-cCcccc-----------ccHHHHHhhcCCCEEEEE
Confidence 0000000000 000000 000110000 0 000000 011233466789999999
Q ss_pred eCCCCCCCcHHHHHHHHHhCC--CcEEEEeCCCCccccccCcHH---HHHHHHhcCcccccCCCCCCCCCCCCCHHHH
Q 012190 387 SGKDNMLPSEDEAKRLNNSLQ--NCIVRNFKDNGHTLLLEEGIS---LLTIIKGTCKYRRSRKLDSVADFLPPSRQEF 459 (468)
Q Consensus 387 G~~D~~v~~~~~~~~l~~~l~--~~~~~~i~~aGH~~~~e~p~~---~~~~I~~~~F~~r~~~~~~v~~~~~~~~~~~ 459 (468)
|+.|.++|.+ .++.+.+.++ +++++.++|++|.+.. ++.- +-+.+.+...--.+...|...+++.|+.+++
T Consensus 210 G~~D~lVp~~-~s~~l~e~~~s~~kkl~~i~Ga~H~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (307)
T PRK13604 210 ANNDSWVKQS-EVIDLLDSIRSEQCKLYSLIGSSHDLGE-NLVVLRNFYQSVTKAAIALDNGSLDLDVDIIEPSFEDL 285 (307)
T ss_pred cCCCCccCHH-HHHHHHHHhccCCcEEEEeCCCccccCc-chHHHHHHHHHHHHHHheecCCcccccccccCCCHHHH
Confidence 9999999999 7999999875 7999999999999864 3322 2222222222334455688999999998875
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.7e-20 Score=199.18 Aligned_cols=268 Identities=15% Similarity=0.141 Sum_probs=149.5
Q ss_pred cCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCC---------hHHHHHH
Q 012190 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP---------FEGLVKF 227 (468)
Q Consensus 157 ~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss---------~~~~~~d 227 (468)
...||.. ++|...|.+ ++|+|||+||++++...|.++++.|.++|+|+++|+||||.|+ ++++++|
T Consensus 8 ~~~~g~~---l~~~~~g~~--~~~~ivllHG~~~~~~~w~~~~~~L~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~d 82 (582)
T PRK05855 8 VSSDGVR---LAVYEWGDP--DRPTVVLVHGYPDNHEVWDGVAPLLADRFRVVAYDVRGAGRSSAPKRTAAYTLARLADD 82 (582)
T ss_pred EeeCCEE---EEEEEcCCC--CCCeEEEEcCCCchHHHHHHHHHHhhcceEEEEecCCCCCCCCCCCcccccCHHHHHHH
Confidence 3445555 455556642 4789999999999999999999999889999999999999883 7889999
Q ss_pred HHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHh--CCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHH
Q 012190 228 VEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR--NPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYL 305 (468)
Q Consensus 228 l~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~--~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (468)
+..+++.+. ..++++|+||||||.+++.++.+ .++.+..+++++++.......+... ......+..........
T Consensus 83 l~~~i~~l~---~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 158 (582)
T PRK05855 83 FAAVIDAVS---PDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRS-GLRRPTPRRLARALGQL 158 (582)
T ss_pred HHHHHHHhC---CCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhh-cccccchhhhhHHHHHH
Confidence 999999853 23469999999999999888776 2344544444443211000000000 00000000000000000
Q ss_pred hh----hhcCCh-hhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHH--hHHHhhhcccC
Q 012190 306 LS----YVMGDP-IKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSA--SAYANSRLHAV 378 (468)
Q Consensus 306 ~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~l~~i 378 (468)
.. .....+ +.... ...... .. .....+................ +........+... .......+..+
T Consensus 159 ~~~~~~~~~~~~~~~~~~--~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (582)
T PRK05855 159 LRSWYIYLFHLPVLPELL--WRLGLG-RA-WPRLLRRVEGTPVDPIPTQTTL--SDGAHGVKLYRANMIRSLSRPRERYT 232 (582)
T ss_pred hhhHHHHHHhCCCCcHHH--hccchh-hH-HHHhhhhccCCCcchhhhhhhh--ccccchHHHHHhhhhhhhccCccCCc
Confidence 00 000000 00000 000000 00 0000000000000000000000 0000000000000 00111234568
Q ss_pred CceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccccC
Q 012190 379 KAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSR 443 (468)
Q Consensus 379 ~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r~~ 443 (468)
++|+|+|+|++|.++++. ..+.+.+.+++.++++++ +||++++|+|+++++.|. .|+.+..
T Consensus 233 ~~P~lii~G~~D~~v~~~-~~~~~~~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~--~fl~~~~ 293 (582)
T PRK05855 233 DVPVQLIVPTGDPYVRPA-LYDDLSRWVPRLWRREIK-AGHWLPMSHPQVLAAAVA--EFVDAVE 293 (582)
T ss_pred cCceEEEEeCCCcccCHH-HhccccccCCcceEEEcc-CCCcchhhChhHHHHHHH--HHHHhcc
Confidence 999999999999999998 688888888888888886 799999999999999999 5665543
|
|
| >PRK10985 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.4e-20 Score=180.11 Aligned_cols=253 Identities=15% Similarity=0.148 Sum_probs=141.9
Q ss_pred cCccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchh--hHHHhHhhh-cCCeEEEEecCCCCCCCCh-------HH
Q 012190 154 KEIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGL--GLILHHKPL-GKAFEVRCLHIPVYDRTPF-------EG 223 (468)
Q Consensus 154 ~~~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~--~~~~~~~~L-~~~~~V~~~D~~G~G~Ss~-------~~ 223 (468)
+.+..+||+... +.+...+....++|+||++||++++.. .+..+++.| ..+|+|+++|+||||.+.. ..
T Consensus 34 ~~~~~~dg~~~~-l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~ 112 (324)
T PRK10985 34 QRLELPDGDFVD-LAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSG 112 (324)
T ss_pred eEEECCCCCEEE-EecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCC
Confidence 345667776521 111111111234789999999988744 345577777 6789999999999997631 23
Q ss_pred HHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCC--ceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhh
Q 012190 224 LVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTI--DLILILSNPATSFGRSQLQPLFPILKAMPDELHCA 301 (468)
Q Consensus 224 ~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~--v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (468)
..+|+..+++.+....+..+++++||||||.+++.+++++++. +.++|+++++........ .+...........
T Consensus 113 ~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~----~~~~~~~~~~~~~ 188 (324)
T PRK10985 113 ETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSY----RMEQGFSRVYQRY 188 (324)
T ss_pred chHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHH----HHhhhHHHHHHHH
Confidence 4677777777776656677899999999999988888887654 889999888653211100 0000000000000
Q ss_pred HHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccC--CcchhHHHHHHHHHHhHHHhhhcccCC
Q 012190 302 VPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDII--PKDTLLWKLKLLKSASAYANSRLHAVK 379 (468)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~l~~i~ 379 (468)
+...+... ............... .+.+ .... .+....+.+ +...+......+.... ....+.+++
T Consensus 189 l~~~l~~~----~~~~~~~~~~~~~~~--~~~~-~~~~----~~~~fd~~~~~~~~g~~~~~~~y~~~~--~~~~l~~i~ 255 (324)
T PRK10985 189 LLNLLKAN----AARKLAAYPGTLPIN--LAQL-KSVR----RLREFDDLITARIHGFADAIDYYRQCS--ALPLLNQIR 255 (324)
T ss_pred HHHHHHHH----HHHHHHhccccccCC--HHHH-hcCC----cHHHHhhhheeccCCCCCHHHHHHHCC--hHHHHhCCC
Confidence 00000000 000000000000000 0000 0000 000000000 1001111111121111 235668999
Q ss_pred ceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccC
Q 012190 380 AEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEE 425 (468)
Q Consensus 380 ~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~ 425 (468)
+|+++|+|++|++++++ ..+.+.+..++.++++++++||+.++|.
T Consensus 256 ~P~lii~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~GH~~~~~g 300 (324)
T PRK10985 256 KPTLIIHAKDDPFMTHE-VIPKPESLPPNVEYQLTEHGGHVGFVGG 300 (324)
T ss_pred CCEEEEecCCCCCCChh-hChHHHHhCCCeEEEECCCCCceeeCCC
Confidence 99999999999999988 5777777888999999999999999985
|
|
| >PRK06765 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.9e-19 Score=178.07 Aligned_cols=272 Identities=14% Similarity=0.071 Sum_probs=164.4
Q ss_pred ccCCCCCCc--eeeeecCCCCCC-CCCCeEEEeCCCCCchhh-------------HHHhH---hhh-cCCeEEEEecCCC
Q 012190 156 IIKPDGGPP--RWFCPVDCGRPL-KGSPTLLFLPGIDGLGLG-------------LILHH---KPL-GKAFEVRCLHIPV 215 (468)
Q Consensus 156 ~~~~dg~~~--~~~~y~~~g~~~-~~~p~lV~lHG~~~s~~~-------------~~~~~---~~L-~~~~~V~~~D~~G 215 (468)
+....|..+ .-+.|...|... ...++||++|++.++... |..++ +.| ...|.|+|+|..|
T Consensus 30 f~l~~G~~l~~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG 109 (389)
T PRK06765 30 FTTEGGRTIPDVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLC 109 (389)
T ss_pred EEccCCCCcCCceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccC
Confidence 444444432 346788888753 346899999999986521 54444 445 5679999999987
Q ss_pred CCC--------C--------------------ChHHHHHHHHHHHHHHhhcCCCCcEE-EEEeChhHHHHHHHHHhCCCC
Q 012190 216 YDR--------T--------------------PFEGLVKFVEETVRREHASSPEKPIY-LVGDSFGGCLALAVAARNPTI 266 (468)
Q Consensus 216 ~G~--------S--------------------s~~~~~~dl~~~i~~~~~~~~~~~i~-LvGhS~GG~ia~~~a~~~P~~ 266 (468)
-|. + +++++++++..+++++ +.+++. ++||||||++|+.+|.++|++
T Consensus 110 ~~~~~~p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~l----gi~~~~~vvG~SmGG~ial~~a~~~P~~ 185 (389)
T PRK06765 110 NVQVKDPNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSL----GIARLHAVMGPSMGGMQAQEWAVHYPHM 185 (389)
T ss_pred CCcCCCCCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHc----CCCCceEEEEECHHHHHHHHHHHHChHh
Confidence 542 1 4789999999999884 444775 999999999999999999999
Q ss_pred ceEEEEeCCCCCCCCCCcCcchH----HHhhCchhHH----------hhH--HHHhhhhc-CChhhHHHHhhccC----C
Q 012190 267 DLILILSNPATSFGRSQLQPLFP----ILKAMPDELH----------CAV--PYLLSYVM-GDPIKMAMVNIENR----L 325 (468)
Q Consensus 267 v~~lVli~p~~~~~~~~~~~~~~----~~~~~~~~~~----------~~~--~~~~~~~~-~~~~~~~~~~~~~~----~ 325 (468)
++++|++++.............. .+..-+.+.. ..+ ...+.... ..+..+. ...... .
T Consensus 186 v~~lv~ia~~~~~~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~-~~f~r~~~~~~ 264 (389)
T PRK06765 186 VERMIGVIGNPQNDAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYE-TTFPRNASIEV 264 (389)
T ss_pred hheEEEEecCCCCChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHH-HHcCcCccccc
Confidence 99999998765322111001111 1111111000 000 00000000 0000000 000000 0
Q ss_pred C------hhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhH-----HHhhhcccCCceEEEEEeCCCCCCC
Q 012190 326 P------PRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASA-----YANSRLHAVKAEVLVLASGKDNMLP 394 (468)
Q Consensus 326 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~l~~i~~PvLlI~G~~D~~v~ 394 (468)
. .....+.+.+. ........+....+....+.+...+. ...+.+.++++|+|+|+|++|.++|
T Consensus 265 ~~~~~~~~~~~~e~yl~~------~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p 338 (389)
T PRK06765 265 DPYEKVSTLTSFEKEINK------ATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQP 338 (389)
T ss_pred cccccccchhhHHHHHHH------HHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCC
Confidence 0 00000011100 01112233444455555555544321 2356778999999999999999999
Q ss_pred cHHHHHHHHHhCC----CcEEEEeCC-CCccccccCcHHHHHHHHhcCcccc
Q 012190 395 SEDEAKRLNNSLQ----NCIVRNFKD-NGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 395 ~~~~~~~l~~~l~----~~~~~~i~~-aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
++ ..+.+.+.++ +++++++++ +||+.++|+|+++++.|. .|+.+
T Consensus 339 ~~-~~~~la~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~--~FL~~ 387 (389)
T PRK06765 339 PR-YNYKMVDILQKQGKYAEVYEIESINGHMAGVFDIHLFEKKIY--EFLNR 387 (389)
T ss_pred HH-HHHHHHHHhhhcCCCeEEEEECCCCCcchhhcCHHHHHHHHH--HHHcc
Confidence 99 6888998886 689999985 999999999999999999 66654
|
|
| >PRK05077 frsA fermentation/respiration switch protein; Reviewed | Back alignment and domain information |
|---|
Probab=99.81 E-value=2e-18 Score=174.08 Aligned_cols=207 Identities=14% Similarity=0.081 Sum_probs=130.9
Q ss_pred CCCeEEEeCCCCCch-hhHHHhHhhh-cCCeEEEEecCCCCCCCCh----HHHHHHHHHHHHHHhhc--CCCCcEEEEEe
Q 012190 178 GSPTLLFLPGIDGLG-LGLILHHKPL-GKAFEVRCLHIPVYDRTPF----EGLVKFVEETVRREHAS--SPEKPIYLVGD 249 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~-~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss~----~~~~~dl~~~i~~~~~~--~~~~~i~LvGh 249 (468)
..|+||++||+++.. ..|..+++.| ..||.|+++|+||+|.|.- .+.......+++.+... ....+|.++||
T Consensus 193 ~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~ 272 (414)
T PRK05077 193 PFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLTQDSSLLHQAVLNALPNVPWVDHTRVAAFGF 272 (414)
T ss_pred CccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCccccHHHHHHHHHHHHHhCcccCcccEEEEEE
Confidence 467888888877764 4677788888 6689999999999998832 22222223444443322 13468999999
Q ss_pred ChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhH
Q 012190 250 SFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRI 329 (468)
Q Consensus 250 S~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (468)
||||.+|+.+|..+|++++++|+++|........ ......++......+ ...++.+ ..+
T Consensus 273 S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~----~~~~~~~p~~~~~~l----a~~lg~~----------~~~--- 331 (414)
T PRK05077 273 RFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTD----PKRQQQVPEMYLDVL----ASRLGMH----------DAS--- 331 (414)
T ss_pred ChHHHHHHHHHHhCCcCceEEEEECCccchhhcc----hhhhhhchHHHHHHH----HHHhCCC----------CCC---
Confidence 9999999999999999999999998865311000 001111111100000 0000000 000
Q ss_pred HhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhc-ccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCC
Q 012190 330 KLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRL-HAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQN 408 (468)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l-~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~ 408 (468)
.+.+.. .+..+.... ...+ .++++|+|+|+|++|.++|++ ..+.+.+..++
T Consensus 332 -~~~l~~-----------------------~l~~~sl~~---~~~l~~~i~~PvLiI~G~~D~ivP~~-~a~~l~~~~~~ 383 (414)
T PRK05077 332 -DEALRV-----------------------ELNRYSLKV---QGLLGRRCPTPMLSGYWKNDPFSPEE-DSRLIASSSAD 383 (414)
T ss_pred -hHHHHH-----------------------Hhhhccchh---hhhhccCCCCcEEEEecCCCCCCCHH-HHHHHHHhCCC
Confidence 000000 000000000 0111 578999999999999999999 79999999999
Q ss_pred cEEEEeCCCCccccccCcHHHHHHHHhc
Q 012190 409 CIVRNFKDNGHTLLLEEGISLLTIIKGT 436 (468)
Q Consensus 409 ~~~~~i~~aGH~~~~e~p~~~~~~I~~~ 436 (468)
.++++++++ ++.+.++++.+.|.+|
T Consensus 384 ~~l~~i~~~---~~~e~~~~~~~~i~~w 408 (414)
T PRK05077 384 GKLLEIPFK---PVYRNFDKALQEISDW 408 (414)
T ss_pred CeEEEccCC---CccCCHHHHHHHHHHH
Confidence 999999986 5667999999999843
|
|
| >TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.2e-18 Score=163.96 Aligned_cols=227 Identities=14% Similarity=0.069 Sum_probs=133.8
Q ss_pred CCeEEEeCCCCC----chhhHHHhHhhh-cCCeEEEEecCCCCCCC-----ChHHHHHHHHHHHHHHhhcC-CCCcEEEE
Q 012190 179 SPTLLFLPGIDG----LGLGLILHHKPL-GKAFEVRCLHIPVYDRT-----PFEGLVKFVEETVRREHASS-PEKPIYLV 247 (468)
Q Consensus 179 ~p~lV~lHG~~~----s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S-----s~~~~~~dl~~~i~~~~~~~-~~~~i~Lv 247 (468)
++.+|++||.++ +...+..+++.| ..+|.|+++|+||||.| +++++.+|+.++++.+.... +.++++++
T Consensus 26 ~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~~~~~~~~~d~~~~~~~l~~~~~g~~~i~l~ 105 (274)
T TIGR03100 26 TTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGENLGFEGIDADIAAAIDAFREAAPHLRRIVAW 105 (274)
T ss_pred CCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCCcEEEE
Confidence 456777777653 344567788888 56899999999999988 46778889999998876543 34579999
Q ss_pred EeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhH-HHHhhhhcCChhhHHHHhhccCCC
Q 012190 248 GDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAV-PYLLSYVMGDPIKMAMVNIENRLP 326 (468)
Q Consensus 248 GhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 326 (468)
||||||.+++.+|.. ++.++++|+++|........... ..... ...... ......+.. ..++
T Consensus 106 G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~-----------g~~~ 168 (274)
T TIGR03100 106 GLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQAAS---RIRHY--YLGQLLSADFWRKLLS-----------GEVN 168 (274)
T ss_pred EECHHHHHHHHHhhh-CCCccEEEEECCccCCcccchHH---HHHHH--HHHHHhChHHHHHhcC-----------CCcc
Confidence 999999999988765 47899999999864321111100 00000 000000 000000000 1111
Q ss_pred hhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHH----HHH
Q 012190 327 PRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEA----KRL 402 (468)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~----~~l 402 (468)
.......+...+.... . ........ .....+...+..+++|+|+++|++|...+...+. ...
T Consensus 169 ~~~~~~~~~~~~~~~~---~-----~~~~~~~~------~~~~~~~~~l~~~~~P~ll~~g~~D~~~~~~~~~~~~~~~~ 234 (274)
T TIGR03100 169 LGSSLRGLGDALLKAR---Q-----KGDEVAHG------GLAERMKAGLERFQGPVLFILSGNDLTAQEFADSVLGEPAW 234 (274)
T ss_pred HHHHHHHHHHHHHhhh---h-----cCCCcccc------hHHHHHHHHHHhcCCcEEEEEcCcchhHHHHHHHhccChhh
Confidence 1111111111100000 0 00000000 0222234566778999999999999886422000 444
Q ss_pred HHhC--CCcEEEEeCCCCccccccC-cHHHHHHHHhc
Q 012190 403 NNSL--QNCIVRNFKDNGHTLLLEE-GISLLTIIKGT 436 (468)
Q Consensus 403 ~~~l--~~~~~~~i~~aGH~~~~e~-p~~~~~~I~~~ 436 (468)
.+.+ ++++++.+++++|++..|. ++++.+.|.+|
T Consensus 235 ~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~w 271 (274)
T TIGR03100 235 RGALEDPGIERVEIDGADHTFSDRVWREWVAARTTEW 271 (274)
T ss_pred HHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHH
Confidence 4545 7899999999999995554 58899999943
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. |
| >KOG2984 consensus Predicted hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.4e-19 Score=154.21 Aligned_cols=228 Identities=17% Similarity=0.167 Sum_probs=151.3
Q ss_pred eeecCCCCCCCCCCeEEEeCCCCCchh-hHHHhHhhhc--CCeEEEEecCCCCCCCC----------hHHHHHHHHHHHH
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGIDGLGL-GLILHHKPLG--KAFEVRCLHIPVYDRTP----------FEGLVKFVEETVR 233 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~~s~~-~~~~~~~~L~--~~~~V~~~D~~G~G~Ss----------~~~~~~dl~~~i~ 233 (468)
+.|...|. +...|++++|.-|+.. .|.+.+..|. ..+.|+++|.||+|.|. +..-+++..++++
T Consensus 33 l~y~~~G~---G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~ 109 (277)
T KOG2984|consen 33 LGYCKYGH---GPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDLME 109 (277)
T ss_pred eeeeecCC---CCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHHHH
Confidence 57888887 4568999999877665 7888887772 24999999999999993 3444555555556
Q ss_pred HHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCCh
Q 012190 234 REHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDP 313 (468)
Q Consensus 234 ~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (468)
. +..+++.++|+|=||..|+..|+++++.|.++|+.+..+-.+......+ ..+.+ ...|.. -...|
T Consensus 110 a----Lk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~----kgiRd-----v~kWs~-r~R~P 175 (277)
T KOG2984|consen 110 A----LKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAF----KGIRD-----VNKWSA-RGRQP 175 (277)
T ss_pred H----hCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHH----hchHH-----Hhhhhh-hhcch
Confidence 5 3456999999999999999999999999999999876553322211110 00000 000000 00111
Q ss_pred hhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHH--hHHHhhhcccCCceEEEEEeCCCC
Q 012190 314 IKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSA--SAYANSRLHAVKAEVLVLASGKDN 391 (468)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~l~~i~~PvLlI~G~~D~ 391 (468)
+. ....++ .+.+.+. .++.....+... ....+-.+.+++||+|++||++|+
T Consensus 176 ~e-------~~Yg~e----~f~~~wa----------------~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp 228 (277)
T KOG2984|consen 176 YE-------DHYGPE----TFRTQWA----------------AWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDP 228 (277)
T ss_pred HH-------HhcCHH----HHHHHHH----------------HHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCC
Confidence 00 000000 0000000 000011111111 011235678999999999999999
Q ss_pred CCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 392 MLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 392 ~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
+++.. ....+....+.+++.++|.++|.+++..+++|+..+. +|++.
T Consensus 229 ~~~~~-hv~fi~~~~~~a~~~~~peGkHn~hLrya~eFnklv~--dFl~~ 275 (277)
T KOG2984|consen 229 FCGDP-HVCFIPVLKSLAKVEIHPEGKHNFHLRYAKEFNKLVL--DFLKS 275 (277)
T ss_pred CCCCC-CccchhhhcccceEEEccCCCcceeeechHHHHHHHH--HHHhc
Confidence 99999 7999999999999999999999999999999999999 77765
|
|
| >PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.4e-18 Score=161.15 Aligned_cols=208 Identities=20% Similarity=0.198 Sum_probs=122.5
Q ss_pred eEEEEecCCCCCCCC-----------hHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeC
Q 012190 206 FEVRCLHIPVYDRTP-----------FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSN 274 (468)
Q Consensus 206 ~~V~~~D~~G~G~Ss-----------~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~ 274 (468)
|+|+++|+||+|.|+ .+++++++..+++. .+.++++++||||||.+++.+|+++|++|+++|+++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~ 76 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREA----LGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLIS 76 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHH----HTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEES
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHH----hCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEe
Confidence 789999999999886 46777788888777 445579999999999999999999999999999998
Q ss_pred CCC----CCCCCCcCcchHHHhhCchhH----HhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhh
Q 012190 275 PAT----SFGRSQLQPLFPILKAMPDEL----HCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLS 346 (468)
Q Consensus 275 p~~----~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (468)
++. ......+.. ........... ................... .. .......... ..
T Consensus 77 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-----~~~~~~~~~~-----~~ 140 (230)
T PF00561_consen 77 PPPDLPDGLWNRIWPR-GNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYD-----RE-----FVEDFLKQFQ-----SQ 140 (230)
T ss_dssp ESSHHHHHHHHHCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HH-----HHHTHHHHHH-----HH
T ss_pred eeccchhhhhHHHHhh-hhhhhhHHHhhhccccccchhhhhhhhhheeecc-----Cc-----cccchhhccc-----hh
Confidence 853 000000000 00000000000 0000000000000000000 00 0000000000 00
Q ss_pred hhhccCCcchhHHHHH--HHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCcccccc
Q 012190 347 VMSDIIPKDTLLWKLK--LLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLE 424 (468)
Q Consensus 347 ~~~~~~~~~~l~~~~~--~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e 424 (468)
................ ............+..+++|+|+++|++|.++|+. ....+.+.+|+.++++++++||+.+++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~-~~~~~~~~~~~~~~~~~~~~GH~~~~~ 219 (230)
T PF00561_consen 141 QYARFAETDAFDNMFWNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPE-SSEQLAKLIPNSQLVLIEGSGHFAFLE 219 (230)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHH-HHHHHHHHSTTEEEEEETTCCSTHHHH
T ss_pred hhhHHHHHHHHhhhccccccccccccccccccccCCCeEEEEeCCCCCCCHH-HHHHHHHhcCCCEEEECCCCChHHHhc
Confidence 0000000000000000 0111111223566789999999999999999999 688899999999999999999999999
Q ss_pred CcHHHHHHHH
Q 012190 425 EGISLLTIIK 434 (468)
Q Consensus 425 ~p~~~~~~I~ 434 (468)
.|+++.+.|.
T Consensus 220 ~~~~~~~~i~ 229 (230)
T PF00561_consen 220 GPDEFNEIII 229 (230)
T ss_dssp SHHHHHHHHH
T ss_pred CHHhhhhhhc
Confidence 9999999886
|
; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A .... |
| >PRK11071 esterase YqiA; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.1e-18 Score=153.68 Aligned_cols=180 Identities=19% Similarity=0.204 Sum_probs=118.9
Q ss_pred CeEEEeCCCCCchhhHHH--hHhhhc---CCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHH
Q 012190 180 PTLLFLPGIDGLGLGLIL--HHKPLG---KAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGC 254 (468)
Q Consensus 180 p~lV~lHG~~~s~~~~~~--~~~~L~---~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ 254 (468)
|+|||+||++++...|.. +...++ .+|+|+++|+|||+ ++.++++.+++++ .+.++++++||||||.
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~----~~~~~~l~~l~~~----~~~~~~~lvG~S~Gg~ 73 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP----ADAAELLESLVLE----HGGDPLGLVGSSLGGY 73 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH----HHHHHHHHHHHHH----cCCCCeEEEEECHHHH
Confidence 689999999999999884 334453 37999999999996 5788888888887 4456899999999999
Q ss_pred HHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhh
Q 012190 255 LALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQL 334 (468)
Q Consensus 255 ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (468)
+++.+|.++|. ++|+++|+..+. ..+.. ..+... +....
T Consensus 74 ~a~~~a~~~~~---~~vl~~~~~~~~--------~~~~~---------------~~~~~~--------~~~~~------- 112 (190)
T PRK11071 74 YATWLSQCFML---PAVVVNPAVRPF--------ELLTD---------------YLGENE--------NPYTG------- 112 (190)
T ss_pred HHHHHHHHcCC---CEEEECCCCCHH--------HHHHH---------------hcCCcc--------cccCC-------
Confidence 99999999983 468888854310 00000 000000 00000
Q ss_pred hhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEe
Q 012190 335 SNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNF 414 (468)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i 414 (468)
+.+. +....+ ....... ...+ ..++|+++|+|++|+++|++ .+.++.+ +++.+++
T Consensus 113 -~~~~------------~~~~~~----~d~~~~~---~~~i-~~~~~v~iihg~~De~V~~~-~a~~~~~---~~~~~~~ 167 (190)
T PRK11071 113 -QQYV------------LESRHI----YDLKVMQ---IDPL-ESPDLIWLLQQTGDEVLDYR-QAVAYYA---ACRQTVE 167 (190)
T ss_pred -CcEE------------EcHHHH----HHHHhcC---CccC-CChhhEEEEEeCCCCcCCHH-HHHHHHH---hcceEEE
Confidence 0000 000000 0000000 1122 36788999999999999999 7888887 4577788
Q ss_pred CCCCccccccCcHHHHHHHHh
Q 012190 415 KDNGHTLLLEEGISLLTIIKG 435 (468)
Q Consensus 415 ~~aGH~~~~e~p~~~~~~I~~ 435 (468)
+|++|.. ...++..+.+.+
T Consensus 168 ~ggdH~f--~~~~~~~~~i~~ 186 (190)
T PRK11071 168 EGGNHAF--VGFERYFNQIVD 186 (190)
T ss_pred CCCCcch--hhHHHhHHHHHH
Confidence 9999998 344777777773
|
|
| >PRK10566 esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.9e-17 Score=156.36 Aligned_cols=107 Identities=19% Similarity=0.208 Sum_probs=78.1
Q ss_pred eecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCCC-------hH-------HHHHHHHHHH
Q 012190 168 CPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTP-------FE-------GLVKFVEETV 232 (468)
Q Consensus 168 ~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss-------~~-------~~~~dl~~~i 232 (468)
+|.+.+...+..|+||++||++++...|..+++.| .++|.|+++|+||||.+. +. +..+++.+++
T Consensus 16 ~~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (249)
T PRK10566 16 HAFPAGQRDTPLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLR 95 (249)
T ss_pred EEcCCCCCCCCCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHH
Confidence 34444332234689999999999998899999999 568999999999998751 11 2245555566
Q ss_pred HHHhhc--CCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeC
Q 012190 233 RREHAS--SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSN 274 (468)
Q Consensus 233 ~~~~~~--~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~ 274 (468)
+.+... ...++++++||||||.+++.+++++|+...++++++
T Consensus 96 ~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~ 139 (249)
T PRK10566 96 AAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMG 139 (249)
T ss_pred HHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeC
Confidence 655433 235689999999999999999999987554555443
|
|
| >TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.3e-17 Score=163.80 Aligned_cols=102 Identities=20% Similarity=0.207 Sum_probs=84.6
Q ss_pred CCeEEEeCCCCCchhhH-----HHhHhhh-cCCeEEEEecCCCCCCC----ChHHHHH-HHHHHHHHHhhcCCCCcEEEE
Q 012190 179 SPTLLFLPGIDGLGLGL-----ILHHKPL-GKAFEVRCLHIPVYDRT----PFEGLVK-FVEETVRREHASSPEKPIYLV 247 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~-----~~~~~~L-~~~~~V~~~D~~G~G~S----s~~~~~~-dl~~~i~~~~~~~~~~~i~Lv 247 (468)
+++||++||+..+...+ ..+++.| .++|+|+++|++|+|.+ ++++++. ++.++++.+....+.++++++
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~~~~~d~~~~~~~~~v~~l~~~~~~~~i~lv 141 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRYLTLDDYINGYIDKCVDYICRTSKLDQISLL 141 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhcCCHHHHHHHHHHHHHHHHHHHhCCCcccEE
Confidence 55799999986655544 5688888 66899999999999976 4677764 477777777766677899999
Q ss_pred EeChhHHHHHHHHHhCCCCceEEEEeCCCCCCC
Q 012190 248 GDSFGGCLALAVAARNPTIDLILILSNPATSFG 280 (468)
Q Consensus 248 GhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~ 280 (468)
||||||.+++.+++.+|++++++|+++++..+.
T Consensus 142 GhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~ 174 (350)
T TIGR01836 142 GICQGGTFSLCYAALYPDKIKNLVTMVTPVDFE 174 (350)
T ss_pred EECHHHHHHHHHHHhCchheeeEEEeccccccC
Confidence 999999999999999999999999999887654
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. |
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.9e-17 Score=142.54 Aligned_cols=143 Identities=24% Similarity=0.340 Sum_probs=113.8
Q ss_pred eEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHH
Q 012190 181 TLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAV 259 (468)
Q Consensus 181 ~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~ 259 (468)
+||++||++++...|..+.+.| .++|.|+++|+|++|.+...+.++++.+.+.... ....+++++|||+||.+++.+
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~ 78 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDGADAVERVLADIRAGY--PDPDRIILIGHSMGGAIAANL 78 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHHSHHHHHHHHHHHHHH--CTCCEEEEEEETHHHHHHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccchhHHHHHHHHHHHhhc--CCCCcEEEEEEccCcHHHHHH
Confidence 5899999999999999999999 6789999999999999954444444444432212 245799999999999999999
Q ss_pred HHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcc
Q 012190 260 AARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLP 339 (468)
Q Consensus 260 a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (468)
+.++ ..++++|+++|.. .
T Consensus 79 ~~~~-~~v~~~v~~~~~~------------------~------------------------------------------- 96 (145)
T PF12695_consen 79 AARN-PRVKAVVLLSPYP------------------D------------------------------------------- 96 (145)
T ss_dssp HHHS-TTESEEEEESESS------------------G-------------------------------------------
T ss_pred hhhc-cceeEEEEecCcc------------------c-------------------------------------------
Confidence 9998 7899999998710 0
Q ss_pred hhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC-CcEEEEeCCCC
Q 012190 340 ALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ-NCIVRNFKDNG 418 (468)
Q Consensus 340 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~-~~~~~~i~~aG 418 (468)
.+.+...++|+++++|++|..++++ ..+.+.+.++ +.+++++++++
T Consensus 97 --------------------------------~~~~~~~~~pv~~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~i~g~~ 143 (145)
T PF12695_consen 97 --------------------------------SEDLAKIRIPVLFIHGENDPLVPPE-QVRRLYEALPGPKELYIIPGAG 143 (145)
T ss_dssp --------------------------------CHHHTTTTSEEEEEEETT-SSSHHH-HHHHHHHHHCSSEEEEEETTS-
T ss_pred --------------------------------hhhhhccCCcEEEEEECCCCcCCHH-HHHHHHHHcCCCcEEEEeCCCc
Confidence 0122456679999999999999998 7889888887 68999999999
Q ss_pred cc
Q 012190 419 HT 420 (468)
Q Consensus 419 H~ 420 (468)
|+
T Consensus 144 H~ 145 (145)
T PF12695_consen 144 HF 145 (145)
T ss_dssp TT
T ss_pred Cc
Confidence 96
|
... |
| >TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I | Back alignment and domain information |
|---|
Probab=99.75 E-value=7.5e-17 Score=165.18 Aligned_cols=251 Identities=18% Similarity=0.093 Sum_probs=149.8
Q ss_pred ceeeeecCCCCCCCCCCeEEEeCCCCCchhhHH-----HhHhhh-cCCeEEEEecCCCCCCC----ChHHHHH-HHHHHH
Q 012190 164 PRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLI-----LHHKPL-GKAFEVRCLHIPVYDRT----PFEGLVK-FVEETV 232 (468)
Q Consensus 164 ~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~-----~~~~~L-~~~~~V~~~D~~G~G~S----s~~~~~~-dl~~~i 232 (468)
...++|.+... ...+++||++||+......|. .+++.| .++|+|+++|++|+|.+ ++++++. .+.+.+
T Consensus 174 ~eLi~Y~P~t~-~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al 252 (532)
T TIGR01838 174 FQLIQYEPTTE-TVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAAL 252 (532)
T ss_pred EEEEEeCCCCC-cCCCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHH
Confidence 45677765543 124678999999988887775 688888 67899999999999977 3566664 467777
Q ss_pred HHHhhcCCCCcEEEEEeChhHHHHH----HHHHhC-CCCceEEEEeCCCCCCCCCCcCcch---H---HHhhCchh---H
Q 012190 233 RREHASSPEKPIYLVGDSFGGCLAL----AVAARN-PTIDLILILSNPATSFGRSQLQPLF---P---ILKAMPDE---L 298 (468)
Q Consensus 233 ~~~~~~~~~~~i~LvGhS~GG~ia~----~~a~~~-P~~v~~lVli~p~~~~~~~~~~~~~---~---~~~~~~~~---~ 298 (468)
+.+....+.++++++||||||.++. .+++.+ |++|++++++++...+......... . .++..... +
T Consensus 253 ~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~l 332 (532)
T TIGR01838 253 EVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGYL 332 (532)
T ss_pred HHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCCC
Confidence 7766556778999999999999852 345665 7899999999988776543211100 0 00000000 0
Q ss_pred -HhhHHHHhhhhcCChhhHH--HHhhccCCChhH-HhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHH----
Q 012190 299 -HCAVPYLLSYVMGDPIKMA--MVNIENRLPPRI-KLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAY---- 370 (468)
Q Consensus 299 -~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---- 370 (468)
...+...+..+..+.+.+. ...+.....+.. ....+.. -...++.....+.++.+.....-
T Consensus 333 pg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~-----------D~t~lP~~~~~~~lr~ly~~N~L~~G~ 401 (532)
T TIGR01838 333 DGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNS-----------DSTNLPGKMHNFYLRNLYLQNALTTGG 401 (532)
T ss_pred CHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhc-----------cCccchHHHHHHHHHHHHhcCCCcCCe
Confidence 0000111111111111100 000000000000 0000000 00012222222222222111110
Q ss_pred -----HhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcH
Q 012190 371 -----ANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGI 427 (468)
Q Consensus 371 -----~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~ 427 (468)
....+..+++|+|+|+|++|.++|++ .++.+.+.+++.+..+++++||.+++++|.
T Consensus 402 ~~v~g~~~dL~~I~vPvLvV~G~~D~IvP~~-sa~~l~~~i~~~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 402 LEVCGVRLDLSKVKVPVYIIATREDHIAPWQ-SAYRGAALLGGPKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred eEECCEecchhhCCCCEEEEeeCCCCcCCHH-HHHHHHHHCCCCEEEEECCCCCchHhhCCC
Confidence 12567889999999999999999999 689999999999999999999999999886
|
This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >PLN02872 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.4e-17 Score=161.82 Aligned_cols=274 Identities=14% Similarity=0.129 Sum_probs=153.5
Q ss_pred HhccCccCCCCCCceeeeecCCCC--CCCCCCeEEEeCCCCCchhhHH------HhHhhh-cCCeEEEEecCCCCCCC--
Q 012190 151 DAAKEIIKPDGGPPRWFCPVDCGR--PLKGSPTLLFLPGIDGLGLGLI------LHHKPL-GKAFEVRCLHIPVYDRT-- 219 (468)
Q Consensus 151 ~~~~~~~~~dg~~~~~~~y~~~g~--~~~~~p~lV~lHG~~~s~~~~~------~~~~~L-~~~~~V~~~D~~G~G~S-- 219 (468)
.+...+.+.||..+...+....+. ...++|+|+|+||+++++..|. .+...| .++|+|+++|+||++.|
T Consensus 44 ~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~g 123 (395)
T PLN02872 44 CTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYG 123 (395)
T ss_pred ceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccccC
Confidence 344567788998765444321111 1124688999999999988874 233456 56899999999998643
Q ss_pred --------------ChHHHH-HHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCC---CceEEEEeCCCCCCCC
Q 012190 220 --------------PFEGLV-KFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPT---IDLILILSNPATSFGR 281 (468)
Q Consensus 220 --------------s~~~~~-~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~---~v~~lVli~p~~~~~~ 281 (468)
++++++ .|+.++++++... ..++++++||||||.+++.++ .+|+ +|+.+++++|......
T Consensus 124 h~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~-~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~~~~ 201 (395)
T PLN02872 124 HVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSI-TNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISYLDH 201 (395)
T ss_pred CCCCCccchhccCCcHHHHHHHHHHHHHHHHHhc-cCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhhhcc
Confidence 356777 7999999987643 246899999999999998544 6776 6888899998764322
Q ss_pred CCcCcchHHHhh-CchhHH------------hhHHHHhhhhcCChh-hHHHHhhccCCChhHHhhhhhhhcchhcchhhh
Q 012190 282 SQLQPLFPILKA-MPDELH------------CAVPYLLSYVMGDPI-KMAMVNIENRLPPRIKLEQLSNNLPALLPRLSV 347 (468)
Q Consensus 282 ~~~~~~~~~~~~-~~~~~~------------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (468)
.. ..+...+.. ....+. ..+..+...+..... .........+.+. ..... .++.
T Consensus 202 ~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~-~~n~~----------~~~~ 269 (395)
T PLN02872 202 VT-APLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNC-CFNAS----------RIDY 269 (395)
T ss_pred CC-CHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCc-ccchh----------hhhH
Confidence 11 111100000 000000 000000000000000 0000000000000 00000 0000
Q ss_pred hhccCCcch----hHHHHHHHH-------------HHhHH-----HhhhcccC--CceEEEEEeCCCCCCCcHHHHHHHH
Q 012190 348 MSDIIPKDT----LLWKLKLLK-------------SASAY-----ANSRLHAV--KAEVLVLASGKDNMLPSEDEAKRLN 403 (468)
Q Consensus 348 ~~~~~~~~~----l~~~~~~~~-------------~~~~~-----~~~~l~~i--~~PvLlI~G~~D~~v~~~~~~~~l~ 403 (468)
+....+..+ +......+. ....+ ....+.++ ++|+++++|++|.+++++ ..+.+.
T Consensus 270 ~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~-dv~~l~ 348 (395)
T PLN02872 270 YLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVT-DVEHTL 348 (395)
T ss_pred HHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHH-HHHHHH
Confidence 001011111 000011110 00000 01345666 589999999999999999 699999
Q ss_pred HhCCC-cEEEEeCCCCcc---ccccCcHHHHHHHHhcCcccc
Q 012190 404 NSLQN-CIVRNFKDNGHT---LLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 404 ~~l~~-~~~~~i~~aGH~---~~~e~p~~~~~~I~~~~F~~r 441 (468)
+.+++ .+++.++++||. ...|.|+++.+.|. +|+++
T Consensus 349 ~~Lp~~~~l~~l~~~gH~dfi~~~eape~V~~~Il--~fL~~ 388 (395)
T PLN02872 349 AELPSKPELLYLENYGHIDFLLSTSAKEDVYNHMI--QFFRS 388 (395)
T ss_pred HHCCCccEEEEcCCCCCHHHHhCcchHHHHHHHHH--HHHHH
Confidence 99987 688899999996 44588999999998 56553
|
|
| >COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.9e-16 Score=146.89 Aligned_cols=247 Identities=21% Similarity=0.215 Sum_probs=140.9
Q ss_pred eeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcC---CeEEEEecCCCCCCCC-----hHHHHHHHHHHHHHHhhc
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGK---AFEVRCLHIPVYDRTP-----FEGLVKFVEETVRREHAS 238 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~---~~~V~~~D~~G~G~Ss-----~~~~~~dl~~~i~~~~~~ 238 (468)
+.|...+.. +|+++++||++++...|......+.. .|+++.+|+||||.|+ ...+++++..+++++
T Consensus 12 ~~~~~~~~~---~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~--- 85 (282)
T COG0596 12 LAYREAGGG---GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSDPAGYSLSAYADDLAALLDAL--- 85 (282)
T ss_pred EEEeecCCC---CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCCcccccHHHHHHHHHHHHHHh---
Confidence 445544442 55899999999999999884333321 2999999999999994 445578888888874
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCc-------chHHHhhCchhH-HhhHHHHhhhhc
Q 012190 239 SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQP-------LFPILKAMPDEL-HCAVPYLLSYVM 310 (468)
Q Consensus 239 ~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~~ 310 (468)
...+++++||||||.+++.++.++|+.+.++|++++........... ............ ............
T Consensus 86 -~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (282)
T COG0596 86 -GLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAAFAALLAALG 164 (282)
T ss_pred -CCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccchhhhhhhhhccc
Confidence 33469999999999999999999999999999999865411110000 000000000000 000000000000
Q ss_pred -CChhhHHHH-hhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeC
Q 012190 311 -GDPIKMAMV-NIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASG 388 (468)
Q Consensus 311 -~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~ 388 (468)
......... ...... ......... ..................... .....+..+++|+++++|+
T Consensus 165 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~l~i~g~ 230 (282)
T COG0596 165 LLAALAAAARAGLAEAL-----RAPLLGAAA-------AAFARAARADLAAALLALLDR--DLRAALARITVPTLIIHGE 230 (282)
T ss_pred ccccccccchhcccccc-----ccccchhHh-------hhhhhhcccccchhhhccccc--ccchhhccCCCCeEEEecC
Confidence 000000000 000000 000000000 000000000000000000000 1123457788999999999
Q ss_pred CCCCCCcHHHHHHHHHhCCC-cEEEEeCCCCccccccCcHHHHHHHHh
Q 012190 389 KDNMLPSEDEAKRLNNSLQN-CIVRNFKDNGHTLLLEEGISLLTIIKG 435 (468)
Q Consensus 389 ~D~~v~~~~~~~~l~~~l~~-~~~~~i~~aGH~~~~e~p~~~~~~I~~ 435 (468)
+|.+.+.. ....+.+.+++ +++++++++||+.++++|+.+.+.+.+
T Consensus 231 ~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~ 277 (282)
T COG0596 231 DDPVVPAE-LARRLAAALPNDARLVVIPGAGHFPHLEAPEAFAAALLA 277 (282)
T ss_pred CCCcCCHH-HHHHHHhhCCCCceEEEeCCCCCcchhhcHHHHHHHHHH
Confidence 99666666 46777778885 899999999999999999999988883
|
|
| >KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.7e-15 Score=137.24 Aligned_cols=179 Identities=19% Similarity=0.189 Sum_probs=133.0
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhhcC--CeEEEEecCCCCCCCC----hHHHHHHHHHHHHHHhhcC-CCCcEEEEEeCh
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPLGK--AFEVRCLHIPVYDRTP----FEGLVKFVEETVRREHASS-PEKPIYLVGDSF 251 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~--~~~V~~~D~~G~G~Ss----~~~~~~dl~~~i~~~~~~~-~~~~i~LvGhS~ 251 (468)
.++++++||..........+...|+. +++|+++|+.|+|.|+ -....+|+.++.+.++... +.++|+|+|+|+
T Consensus 60 ~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~n~y~Di~avye~Lr~~~g~~~~Iil~G~Si 139 (258)
T KOG1552|consen 60 HPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSERNLYADIKAVYEWLRNRYGSPERIILYGQSI 139 (258)
T ss_pred ceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCcccccchhhHHHHHHHHHhhcCCCceEEEEEecC
Confidence 58999999997666666666667755 7999999999999983 3467788888888888777 478999999999
Q ss_pred hHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHh
Q 012190 252 GGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKL 331 (468)
Q Consensus 252 GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (468)
|+..++.+|++.| +.++||.+|..+.. +.+-. .. ..
T Consensus 140 Gt~~tv~Lasr~~--~~alVL~SPf~S~~-----------rv~~~---------------~~----------------~~ 175 (258)
T KOG1552|consen 140 GTVPTVDLASRYP--LAAVVLHSPFTSGM-----------RVAFP---------------DT----------------KT 175 (258)
T ss_pred CchhhhhHhhcCC--cceEEEeccchhhh-----------hhhcc---------------Cc----------------ce
Confidence 9999999999998 99999998844221 00000 00 00
Q ss_pred hhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCc-E
Q 012190 332 EQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNC-I 410 (468)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~-~ 410 (468)
..+.+. +.. .+....++||+|++||+.|.+++.. ....+.+..+++ +
T Consensus 176 ~~~~d~--------------f~~-----------------i~kI~~i~~PVLiiHgtdDevv~~s-Hg~~Lye~~k~~~e 223 (258)
T KOG1552|consen 176 TYCFDA--------------FPN-----------------IEKISKITCPVLIIHGTDDEVVDFS-HGKALYERCKEKVE 223 (258)
T ss_pred EEeecc--------------ccc-----------------cCcceeccCCEEEEecccCceeccc-ccHHHHHhccccCC
Confidence 000000 000 2456889999999999999999999 899999999865 8
Q ss_pred EEEeCCCCccccccCcHHHHHHHH
Q 012190 411 VRNFKDNGHTLLLEEGISLLTIIK 434 (468)
Q Consensus 411 ~~~i~~aGH~~~~e~p~~~~~~I~ 434 (468)
-.++.|+||.-..-.|+ +...++
T Consensus 224 pl~v~g~gH~~~~~~~~-yi~~l~ 246 (258)
T KOG1552|consen 224 PLWVKGAGHNDIELYPE-YIEHLR 246 (258)
T ss_pred CcEEecCCCcccccCHH-HHHHHH
Confidence 88899999997654444 444444
|
|
| >TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.62 E-value=6.4e-15 Score=138.95 Aligned_cols=98 Identities=18% Similarity=0.188 Sum_probs=83.3
Q ss_pred CCeEEEeCCCCCc----hhhHHHhHhhh-cCCeEEEEecCCCCCCC-------ChHHHHHHHHHHHHHHhhcCCCCcEEE
Q 012190 179 SPTLLFLPGIDGL----GLGLILHHKPL-GKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHASSPEKPIYL 246 (468)
Q Consensus 179 ~p~lV~lHG~~~s----~~~~~~~~~~L-~~~~~V~~~D~~G~G~S-------s~~~~~~dl~~~i~~~~~~~~~~~i~L 246 (468)
.|+|||+||+++. ...|..+++.| ..+|.|+++|+||||.| +++++++|+..+++.+... +.++++|
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~~-~~~~v~L 103 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAARWDVWKEDVAAAYRWLIEQ-GHPPVTL 103 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCCHHHHHHHHHHHHHHHHhc-CCCCEEE
Confidence 5789999999864 34567788888 57899999999999988 3677888888887776543 4579999
Q ss_pred EEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 247 VGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 247 vGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
+||||||.+++.+|.++|+.++++|+++|..
T Consensus 104 vG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~ 134 (266)
T TIGR03101 104 WGLRLGALLALDAANPLAAKCNRLVLWQPVV 134 (266)
T ss_pred EEECHHHHHHHHHHHhCccccceEEEecccc
Confidence 9999999999999999999999999999865
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily. |
| >PRK11460 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.3e-14 Score=133.70 Aligned_cols=164 Identities=16% Similarity=0.166 Sum_probs=113.3
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhcC-CeEEEEecCCCCC-------CC-------C-------hHHHHHHHHHHHHHH
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLGK-AFEVRCLHIPVYD-------RT-------P-------FEGLVKFVEETVRRE 235 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~-~~~V~~~D~~G~G-------~S-------s-------~~~~~~dl~~~i~~~ 235 (468)
..|+||++||++++...|..+.+.|.+ .+.+..++.+|.. .+ + +.+..+.+.++++.+
T Consensus 15 ~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 94 (232)
T PRK11460 15 AQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVRYW 94 (232)
T ss_pred CCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHHHH
Confidence 478999999999999999999999953 3344444444431 10 0 122333344444444
Q ss_pred hhcC--CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCCh
Q 012190 236 HASS--PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDP 313 (468)
Q Consensus 236 ~~~~--~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (468)
.... ..++|+|+|||+||.+++.++.++|+.+.++|++++... ..+
T Consensus 95 ~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~--------------~~~------------------ 142 (232)
T PRK11460 95 QQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYA--------------SLP------------------ 142 (232)
T ss_pred HHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccc--------------ccc------------------
Confidence 3332 346899999999999999999999988888877654110 000
Q ss_pred hhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCC
Q 012190 314 IKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNML 393 (468)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v 393 (468)
.....++|++++||++|+++
T Consensus 143 ------------------------------------------------------------~~~~~~~pvli~hG~~D~vv 162 (232)
T PRK11460 143 ------------------------------------------------------------ETAPTATTIHLIHGGEDPVI 162 (232)
T ss_pred ------------------------------------------------------------ccccCCCcEEEEecCCCCcc
Confidence 00123679999999999999
Q ss_pred CcHHHHHHHHHhCC----CcEEEEeCCCCccccccCcHHHHHHHH
Q 012190 394 PSEDEAKRLNNSLQ----NCIVRNFKDNGHTLLLEEGISLLTIIK 434 (468)
Q Consensus 394 ~~~~~~~~l~~~l~----~~~~~~i~~aGH~~~~e~p~~~~~~I~ 434 (468)
|.+ ..+.+.+.+. +++++.++++||.+..+.-+...+.|.
T Consensus 163 p~~-~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~ 206 (232)
T PRK11460 163 DVA-HAVAAQEALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLR 206 (232)
T ss_pred CHH-HHHHHHHHHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHH
Confidence 999 6888877664 568888999999997655555555554
|
|
| >COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.6e-14 Score=133.78 Aligned_cols=247 Identities=16% Similarity=0.210 Sum_probs=135.4
Q ss_pred cCccCCCCCC--ceeeeecCCCCCCCCCCeEEEeCCCCCchh--hHHHhHhhh-cCCeEEEEecCCCCCCCC-------h
Q 012190 154 KEIIKPDGGP--PRWFCPVDCGRPLKGSPTLLFLPGIDGLGL--GLILHHKPL-GKAFEVRCLHIPVYDRTP-------F 221 (468)
Q Consensus 154 ~~~~~~dg~~--~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~--~~~~~~~~L-~~~~~V~~~D~~G~G~Ss-------~ 221 (468)
+.+..+||+- ..|..... ....|.||++||+.|+.. ..+.+...+ .++|.|+++|+|||+++. -
T Consensus 52 e~v~~pdg~~~~ldw~~~p~----~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh 127 (345)
T COG0429 52 ERLETPDGGFIDLDWSEDPR----AAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYH 127 (345)
T ss_pred EEEEcCCCCEEEEeeccCcc----ccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceec
Confidence 4566777765 34444311 234789999999977765 344566777 778999999999999872 2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCC--CceEEEEeCCCCCCCCCCcCcchHHHhhCchhHH
Q 012190 222 EGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPT--IDLILILSNPATSFGRSQLQPLFPILKAMPDELH 299 (468)
Q Consensus 222 ~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~--~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~ 299 (468)
..+.+|+..+++.+....+..|+..+|.|+||.+.+.+..+..+ .+.+.+.++.+..+. .....+.....
T Consensus 128 ~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~--------~~~~~l~~~~s 199 (345)
T COG0429 128 SGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLE--------ACAYRLDSGFS 199 (345)
T ss_pred ccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHH--------HHHHHhcCchh
Confidence 34458888888888887889999999999999544444443222 244445444333220 00000000000
Q ss_pred hhHHHHhhhhcCChhhHHHHh----hccCCChhHHhhhhhhhcchhcchhhhhhccCC--cchhHHHHHHHHHHhHHHhh
Q 012190 300 CAVPYLLSYVMGDPIKMAMVN----IENRLPPRIKLEQLSNNLPALLPRLSVMSDIIP--KDTLLWKLKLLKSASAYANS 373 (468)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~ 373 (468)
..++.....+.+...... .....+.. ..+..+.... +.+....+. .-.+....+.++.... ..
T Consensus 200 ---~~ly~r~l~~~L~~~~~~kl~~l~~~~p~~--~~~~ik~~~t----i~eFD~~~Tap~~Gf~da~dYYr~aSs--~~ 268 (345)
T COG0429 200 ---LRLYSRYLLRNLKRNAARKLKELEPSLPGT--VLAAIKRCRT----IREFDDLLTAPLHGFADAEDYYRQASS--LP 268 (345)
T ss_pred ---hhhhHHHHHHHHHHHHHHHHHhcCcccCcH--HHHHHHhhch----HHhccceeeecccCCCcHHHHHHhccc--cc
Confidence 011111111110000000 00001100 0011111110 011111111 1111122222222211 35
Q ss_pred hcccCCceEEEEEeCCCCCCCcHHHHHHHHH-hCCCcEEEEeCCCCcccccc
Q 012190 374 RLHAVKAEVLVLASGKDNMLPSEDEAKRLNN-SLQNCIVRNFKDNGHTLLLE 424 (468)
Q Consensus 374 ~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~-~l~~~~~~~i~~aGH~~~~e 424 (468)
.+.+|.+|+|+|++.+|++++++ ....... ..|+..+..-+.+||..++.
T Consensus 269 ~L~~Ir~PtLii~A~DDP~~~~~-~iP~~~~~~np~v~l~~t~~GGHvGfl~ 319 (345)
T COG0429 269 LLPKIRKPTLIINAKDDPFMPPE-VIPKLQEMLNPNVLLQLTEHGGHVGFLG 319 (345)
T ss_pred cccccccceEEEecCCCCCCChh-hCCcchhcCCCceEEEeecCCceEEecc
Confidence 77899999999999999999997 4555555 66788999999999999988
|
|
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.5e-14 Score=158.01 Aligned_cols=266 Identities=14% Similarity=0.085 Sum_probs=140.3
Q ss_pred ceeeeecCCCCC---CCCCCeEEEeCCCCCchhhHHHh-----Hhhh-cCCeEEEEecCCCCCC------CChHHHHHHH
Q 012190 164 PRWFCPVDCGRP---LKGSPTLLFLPGIDGLGLGLILH-----HKPL-GKAFEVRCLHIPVYDR------TPFEGLVKFV 228 (468)
Q Consensus 164 ~~~~~y~~~g~~---~~~~p~lV~lHG~~~s~~~~~~~-----~~~L-~~~~~V~~~D~~G~G~------Ss~~~~~~dl 228 (468)
.+.++|.+...+ ...+|+|||+||++.+...|... ++.| ..+|+|+++|+...+. .++.+++..+
T Consensus 49 ~~l~~y~~~~~~~~~~~~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~G~~~~~~~~~~~~l~~~i~~l 128 (994)
T PRK07868 49 YRLRRYFPPDNRPGQPPVGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDFGSPDKVEGGMERNLADHVVAL 128 (994)
T ss_pred EEEEEeCCCCccccccCCCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcCCCCChhHcCccCCHHHHHHHH
Confidence 355677544321 13568999999999999999875 7888 6689999999622111 1344555555
Q ss_pred HHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhC-CCCceEEEEeCCCCCCCCCCcCcch-HH----HhhCchhHH--h
Q 012190 229 EETVRREHASSPEKPIYLVGDSFGGCLALAVAARN-PTIDLILILSNPATSFGRSQLQPLF-PI----LKAMPDELH--C 300 (468)
Q Consensus 229 ~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~-P~~v~~lVli~p~~~~~~~~~~~~~-~~----~~~~~~~~~--~ 300 (468)
.+.++.+... ..++++|+||||||.+++.+|+.+ |++|+++|+++++..+......... .. .......+. .
T Consensus 129 ~~~l~~v~~~-~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (994)
T PRK07868 129 SEAIDTVKDV-TGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRL 207 (994)
T ss_pred HHHHHHHHHh-hCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcC
Confidence 5555543322 235899999999999999998855 5689999998887654322110000 00 000000000 0
Q ss_pred hHHHH---hhhhcCChhhHHH--HhhccCCChhHH--hhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHH---
Q 012190 301 AVPYL---LSYVMGDPIKMAM--VNIENRLPPRIK--LEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAY--- 370 (468)
Q Consensus 301 ~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--- 370 (468)
.++.+ ..+..-++..... ............ .++..+.+.....+. ..+..........+......
T Consensus 208 ~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~-----~~~g~~~~~~~~~~~~~n~~~~g 282 (994)
T PRK07868 208 DIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWI-----AWSGPAISELLKQFIAHNRMMTG 282 (994)
T ss_pred CCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhcc-----ccchHHHHHHHHHHHHhCcccCc
Confidence 00000 0011111111000 000000000000 000000000000000 01111111111111110000
Q ss_pred ---H---hhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEE-EEeCCCCcccccc---CcHHHHHHHHhc
Q 012190 371 ---A---NSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIV-RNFKDNGHTLLLE---EGISLLTIIKGT 436 (468)
Q Consensus 371 ---~---~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~-~~i~~aGH~~~~e---~p~~~~~~I~~~ 436 (468)
. ...+.++++|+|+|+|++|.++|++ ..+.+.+.++++++ .+++++||+.++- .++++-..|.+|
T Consensus 283 ~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~-~~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~w 357 (994)
T PRK07868 283 GFAINGQMVTLADITCPVLAFVGEVDDIGQPA-SVRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADW 357 (994)
T ss_pred eEEECCEEcchhhCCCCEEEEEeCCCCCCCHH-HHHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHH
Confidence 0 0247899999999999999999999 79999999999987 6789999997664 455555555544
|
|
| >KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.59 E-value=4.1e-15 Score=129.70 Aligned_cols=195 Identities=19% Similarity=0.203 Sum_probs=135.9
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhh--cCCeEEEEecCCCCCCCC----hHHHHHHHHHHHHHHhhc--CCCCcEEEEEe
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPL--GKAFEVRCLHIPVYDRTP----FEGLVKFVEETVRREHAS--SPEKPIYLVGD 249 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L--~~~~~V~~~D~~G~G~Ss----~~~~~~dl~~~i~~~~~~--~~~~~i~LvGh 249 (468)
+.|+++++||..|+-....+.+.-+ .-+.+|+.+++||+|.|+ -+.+.-|-+.+++++..+ +...+++|+|.
T Consensus 77 S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~GL~lDs~avldyl~t~~~~dktkivlfGr 156 (300)
T KOG4391|consen 77 SRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSEEGLKLDSEAVLDYLMTRPDLDKTKIVLFGR 156 (300)
T ss_pred CCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCccccceeccHHHHHHHHhcCccCCcceEEEEec
Confidence 4889999999999988887777666 557899999999999983 345555666667666543 34678999999
Q ss_pred ChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhH
Q 012190 250 SFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRI 329 (468)
Q Consensus 250 S~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (468)
|+||++|+.+|+++.+++.++|+-+...+.+.....-..++. ...++.+
T Consensus 157 SlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v~p~~-------~k~i~~l------------------------ 205 (300)
T KOG4391|consen 157 SLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLVFPFP-------MKYIPLL------------------------ 205 (300)
T ss_pred ccCCeeEEEeeccchhheeeeeeechhccchhhhhheeccch-------hhHHHHH------------------------
Confidence 999999999999999999999998876544322111110000 0000000
Q ss_pred HhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC--
Q 012190 330 KLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ-- 407 (468)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~-- 407 (468)
. .+.... ....+..-++|.|+|.|.+|+++||. ..+.+.+.+|
T Consensus 206 -----c-------------------------~kn~~~----S~~ki~~~~~P~LFiSGlkDelVPP~-~Mr~Ly~~c~S~ 250 (300)
T KOG4391|consen 206 -----C-------------------------YKNKWL----SYRKIGQCRMPFLFISGLKDELVPPV-MMRQLYELCPSR 250 (300)
T ss_pred -----H-------------------------HHhhhc----chhhhccccCceEEeecCccccCCcH-HHHHHHHhCchh
Confidence 0 000000 01233566899999999999999999 7999999998
Q ss_pred CcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 408 NCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 408 ~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
.+++..||++.|.-.+- .+..-++|. +|+..
T Consensus 251 ~Krl~eFP~gtHNDT~i-~dGYfq~i~--dFlaE 281 (300)
T KOG4391|consen 251 TKRLAEFPDGTHNDTWI-CDGYFQAIE--DFLAE 281 (300)
T ss_pred hhhheeCCCCccCceEE-eccHHHHHH--HHHHH
Confidence 67899999999985442 233444555 44444
|
|
| >COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.58 E-value=6.6e-14 Score=133.29 Aligned_cols=257 Identities=18% Similarity=0.169 Sum_probs=164.3
Q ss_pred ceeeeecCCCCCCC-CCCeEEEeCCCCCchhhH-----------HHhH---hhh-cCCeEEEEecCCCCC-CC-------
Q 012190 164 PRWFCPVDCGRPLK-GSPTLLFLPGIDGLGLGL-----------ILHH---KPL-GKAFEVRCLHIPVYD-RT------- 219 (468)
Q Consensus 164 ~~~~~y~~~g~~~~-~~p~lV~lHG~~~s~~~~-----------~~~~---~~L-~~~~~V~~~D~~G~G-~S------- 219 (468)
..|+.|...|.... ....|+++||+.++.... ..++ +.+ ...|.|+|.+-.|.+ .|
T Consensus 35 ~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~ 114 (368)
T COG2021 35 DARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSIN 114 (368)
T ss_pred CcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcC
Confidence 35788888887532 356899999999965532 2222 334 457999999998865 33
Q ss_pred -------------ChHHHHHHHHHHHHHHhhcCCCCcEE-EEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCc-
Q 012190 220 -------------PFEGLVKFVEETVRREHASSPEKPIY-LVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQL- 284 (468)
Q Consensus 220 -------------s~~~~~~dl~~~i~~~~~~~~~~~i~-LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~- 284 (468)
++.|+++.-..+++++ +.+++. +||-||||+.|+.++..||++|..+|.++..........
T Consensus 115 p~g~~yg~~FP~~ti~D~V~aq~~ll~~L----GI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia 190 (368)
T COG2021 115 PGGKPYGSDFPVITIRDMVRAQRLLLDAL----GIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIA 190 (368)
T ss_pred CCCCccccCCCcccHHHHHHHHHHHHHhc----CcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHH
Confidence 3668887777777874 444665 899999999999999999999999999987553221110
Q ss_pred -Ccch-HHHhhCchhH------------HhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhh--------------
Q 012190 285 -QPLF-PILKAMPDEL------------HCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSN-------------- 336 (468)
Q Consensus 285 -~~~~-~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 336 (468)
.... +....-|.+- ...+...+..+ ...++.++.+++.+
T Consensus 191 ~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~l-------------tYrS~~~~~~rF~r~~~~~~~~~~~~~f 257 (368)
T COG2021 191 FNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHL-------------TYRSEEELDERFGRRLQADPLRGGGVRF 257 (368)
T ss_pred HHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHH-------------HccCHHHHHHHhcccccccccCCCchhH
Confidence 0000 1111111110 00011111111 11111111222222
Q ss_pred hcchhc-chhhhhhccCCcchhHHHHHHHHHHhHH-----HhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcE
Q 012190 337 NLPALL-PRLSVMSDIIPKDTLLWKLKLLKSASAY-----ANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCI 410 (468)
Q Consensus 337 ~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~-----~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~ 410 (468)
...+++ .........+..+.+.+..+.+...+.. +...|.++++|+|++.-+.|.+.|++ +.+.+.+.++.+.
T Consensus 258 ~vESYL~~qg~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~-~~~~~~~~L~~~~ 336 (368)
T COG2021 258 AVESYLDYQGDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPE-LQRALAEALPAAG 336 (368)
T ss_pred HHHHHHHHHHHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHH-HHHHHHHhccccC
Confidence 111111 1123444556777777777776654432 34568899999999999999999999 7999999998776
Q ss_pred -EEEeC-CCCccccccCcHHHHHHHHhcCccc
Q 012190 411 -VRNFK-DNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 411 -~~~i~-~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
+++++ ..||..++...+.+...|. .|++
T Consensus 337 ~~~~i~S~~GHDaFL~e~~~~~~~i~--~fL~ 366 (368)
T COG2021 337 ALREIDSPYGHDAFLVESEAVGPLIR--KFLA 366 (368)
T ss_pred ceEEecCCCCchhhhcchhhhhHHHH--HHhh
Confidence 65554 6899999999999988888 5554
|
|
| >KOG1838 consensus Alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.57 E-value=5.2e-14 Score=136.57 Aligned_cols=252 Identities=20% Similarity=0.258 Sum_probs=142.0
Q ss_pred cCccCCCCCC--ceeeeecCC-C-CCCCCCCeEEEeCCCCCchh-hH-HHhHhhh-cCCeEEEEecCCCCCCCC------
Q 012190 154 KEIIKPDGGP--PRWFCPVDC-G-RPLKGSPTLLFLPGIDGLGL-GL-ILHHKPL-GKAFEVRCLHIPVYDRTP------ 220 (468)
Q Consensus 154 ~~~~~~dg~~--~~~~~y~~~-g-~~~~~~p~lV~lHG~~~s~~-~~-~~~~~~L-~~~~~V~~~D~~G~G~Ss------ 220 (468)
+.+..+||+. ..|+..... . ......|.+|++||+.+++. .| +.++... .+||+|++++.||+|++.
T Consensus 96 eii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~ 175 (409)
T KOG1838|consen 96 EIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRL 175 (409)
T ss_pred EEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCCce
Confidence 4456788876 346533221 1 11235799999999976665 33 3444444 778999999999999884
Q ss_pred -hHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCC---CCceEEEEeCCCCCC--CCCCcCcch-HHHh-
Q 012190 221 -FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNP---TIDLILILSNPATSF--GRSQLQPLF-PILK- 292 (468)
Q Consensus 221 -~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P---~~v~~lVli~p~~~~--~~~~~~~~~-~~~~- 292 (468)
-..+.+|+.+++++++.++|..|++.+|.||||.+.+.|..+-. ..+.++.+.+|+-.+ ......... ..+.
T Consensus 176 f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~~~~~~~~y~~ 255 (409)
T KOG1838|consen 176 FTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIETPLYRRFYNR 255 (409)
T ss_pred eecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHhcccchHHHHH
Confidence 24577899999999999999999999999999999999998743 345566666664422 000000000 0000
Q ss_pred hCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHh
Q 012190 293 AMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYAN 372 (468)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 372 (468)
.+...+.......-..+..++..+.. ..+..+.+++.+.+... .+.-+... ..++.. ...
T Consensus 256 ~l~~~l~~~~~~~r~~~~~~~vd~d~--~~~~~SvreFD~~~t~~-------------~~gf~~~d---eYY~~a--Ss~ 315 (409)
T KOG1838|consen 256 ALTLNLKRIVLRHRHTLFEDPVDFDV--ILKSRSVREFDEALTRP-------------MFGFKSVD---EYYKKA--SSS 315 (409)
T ss_pred HHHHhHHHHHhhhhhhhhhccchhhh--hhhcCcHHHHHhhhhhh-------------hcCCCcHH---HHHhhc--chh
Confidence 00000000000000001111111100 00111111111111100 00111111 111111 113
Q ss_pred hhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccC
Q 012190 373 SRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEE 425 (468)
Q Consensus 373 ~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~ 425 (468)
..+.+|++|+|+|.+.+|+++|+..--....+..|++-+++-..+||..++|.
T Consensus 316 ~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfleg 368 (409)
T KOG1838|consen 316 NYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLEG 368 (409)
T ss_pred hhcccccccEEEEecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeecc
Confidence 56789999999999999999999622334455667888888888999999987
|
|
| >PLN00021 chlorophyllase | Back alignment and domain information |
|---|
Probab=99.57 E-value=8.6e-14 Score=134.81 Aligned_cols=101 Identities=20% Similarity=0.121 Sum_probs=74.6
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhh----------cCCCCcEEE
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHA----------SSPEKPIYL 246 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~----------~~~~~~i~L 246 (468)
+.|+|||+||++.+...|..+++.| +.+|.|+++|++|++.++.....++..++++.+.. ....+++++
T Consensus 51 ~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l 130 (313)
T PLN00021 51 TYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDGTDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLAL 130 (313)
T ss_pred CCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCchhhHHHHHHHHHHHHhhhhhhcccccccChhheEE
Confidence 4789999999999999999999999 46799999999987654222222222222222221 112358999
Q ss_pred EEeChhHHHHHHHHHhCCC-----CceEEEEeCCCCC
Q 012190 247 VGDSFGGCLALAVAARNPT-----IDLILILSNPATS 278 (468)
Q Consensus 247 vGhS~GG~ia~~~a~~~P~-----~v~~lVli~p~~~ 278 (468)
+||||||.+|+.+|.++++ .+.++|+++|...
T Consensus 131 ~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g 167 (313)
T PLN00021 131 AGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDG 167 (313)
T ss_pred EEECcchHHHHHHHhhccccccccceeeEEeeccccc
Confidence 9999999999999999874 5789999988653
|
|
| >COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.8e-13 Score=121.25 Aligned_cols=210 Identities=18% Similarity=0.234 Sum_probs=135.2
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC-------ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeC
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-------s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS 250 (468)
..+.++++|=.||++..|..+...|.....++++++||+|.- +++.+++.+...+.. ....+|+.++|||
T Consensus 6 ~~~~L~cfP~AGGsa~~fr~W~~~lp~~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~---~~~d~P~alfGHS 82 (244)
T COG3208 6 ARLRLFCFPHAGGSASLFRSWSRRLPADIELLAVQLPGRGDRFGEPLLTDIESLADELANELLP---PLLDAPFALFGHS 82 (244)
T ss_pred CCceEEEecCCCCCHHHHHHHHhhCCchhheeeecCCCcccccCCcccccHHHHHHHHHHHhcc---ccCCCCeeecccc
Confidence 356799999999999999999999988999999999999854 567777766666652 2456799999999
Q ss_pred hhHHHHHHHHHhCC---CCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCCh
Q 012190 251 FGGCLALAVAARNP---TIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPP 327 (468)
Q Consensus 251 ~GG~ia~~~a~~~P---~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (468)
|||++|.++|.+.. -...++.+.+.... ........ ....+. . +-..+..+.+.+ +
T Consensus 83 mGa~lAfEvArrl~~~g~~p~~lfisg~~aP-~~~~~~~i----~~~~D~--~-~l~~l~~lgG~p-------------~ 141 (244)
T COG3208 83 MGAMLAFEVARRLERAGLPPRALFISGCRAP-HYDRGKQI----HHLDDA--D-FLADLVDLGGTP-------------P 141 (244)
T ss_pred hhHHHHHHHHHHHHHcCCCcceEEEecCCCC-CCcccCCc----cCCCHH--H-HHHHHHHhCCCC-------------h
Confidence 99999999997741 12555666554332 11110100 000100 0 001111111111 1
Q ss_pred hHH-hhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHH----HhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHH
Q 012190 328 RIK-LEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKS----ASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRL 402 (468)
Q Consensus 328 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l 402 (468)
+.+ .+++.. ..+-.++. ...+-...-..+.||+.++.|++|..+..+ ....+
T Consensus 142 e~led~El~~----------------------l~LPilRAD~~~~e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~-~~~~W 198 (244)
T COG3208 142 ELLEDPELMA----------------------LFLPILRADFRALESYRYPPPAPLACPIHAFGGEKDHEVSRD-ELGAW 198 (244)
T ss_pred HHhcCHHHHH----------------------HHHHHHHHHHHHhcccccCCCCCcCcceEEeccCcchhccHH-HHHHH
Confidence 000 111111 11111110 011111223678999999999999999998 68878
Q ss_pred HHhCC-CcEEEEeCCCCccccccCcHHHHHHHHh
Q 012190 403 NNSLQ-NCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (468)
Q Consensus 403 ~~~l~-~~~~~~i~~aGH~~~~e~p~~~~~~I~~ 435 (468)
.+... ..++.+++| |||...++.+++...|.+
T Consensus 199 ~~~t~~~f~l~~fdG-gHFfl~~~~~~v~~~i~~ 231 (244)
T COG3208 199 REHTKGDFTLRVFDG-GHFFLNQQREEVLARLEQ 231 (244)
T ss_pred HHhhcCCceEEEecC-cceehhhhHHHHHHHHHH
Confidence 88776 779999995 999999999999998883
|
|
| >PLN02442 S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.56 E-value=5.3e-13 Score=128.32 Aligned_cols=113 Identities=14% Similarity=0.183 Sum_probs=78.8
Q ss_pred eeeecCCCCCCCCCCeEEEeCCCCCchhhHHHh---Hhhh-cCCeEEEEecCCCCC-----CC-----------------
Q 012190 166 WFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILH---HKPL-GKAFEVRCLHIPVYD-----RT----------------- 219 (468)
Q Consensus 166 ~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~---~~~L-~~~~~V~~~D~~G~G-----~S----------------- 219 (468)
+.-|.+.+.+..+.|+|+|+||++++...|... ...+ ..++.|+.+|..++| .+
T Consensus 34 ~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 113 (283)
T PLN02442 34 FSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQ 113 (283)
T ss_pred EEEEcCCcccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeecccc
Confidence 333444333234579999999999998777542 2444 458999999987665 11
Q ss_pred ------C-hHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCC
Q 012190 220 ------P-FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (468)
Q Consensus 220 ------s-~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~ 278 (468)
. .+.+.+++...++........++++++||||||..|+.++.++|+++.++++++|...
T Consensus 114 ~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 179 (283)
T PLN02442 114 EKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIAN 179 (283)
T ss_pred CCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccC
Confidence 0 0223455555555543334556899999999999999999999999999999988654
|
|
| >TIGR02821 fghA_ester_D S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.55 E-value=3.5e-13 Score=129.19 Aligned_cols=100 Identities=16% Similarity=0.200 Sum_probs=73.5
Q ss_pred CCCeEEEeCCCCCchhhHHHh--Hhhh--cCCeEEEEecC--CCCCCCC----------------------------hHH
Q 012190 178 GSPTLLFLPGIDGLGLGLILH--HKPL--GKAFEVRCLHI--PVYDRTP----------------------------FEG 223 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~--~~~L--~~~~~V~~~D~--~G~G~Ss----------------------------~~~ 223 (468)
+.|+|+|+||++++...|... +..+ ..++.|+++|. +|+|.+. ...
T Consensus 41 ~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~ 120 (275)
T TIGR02821 41 PVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSY 120 (275)
T ss_pred CCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHH
Confidence 478999999999998887542 3455 24799999998 5554211 122
Q ss_pred HHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCC
Q 012190 224 LVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (468)
Q Consensus 224 ~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~ 278 (468)
+++++..+++.... ...++++++||||||.+|+.++.++|+.+.++++++|...
T Consensus 121 ~~~~l~~~~~~~~~-~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 174 (275)
T TIGR02821 121 IVQELPALVAAQFP-LDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVA 174 (275)
T ss_pred HHHHHHHHHHhhCC-CCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccC
Confidence 34555555554211 2346899999999999999999999999999999988754
|
This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. |
| >KOG4667 consensus Predicted esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.8e-13 Score=119.52 Aligned_cols=208 Identities=13% Similarity=0.164 Sum_probs=128.2
Q ss_pred CCeEEEeCCCCCchh--hHHHhHhhh-cCCeEEEEecCCCCCCCC-------hHHHHHHHHHHHHHHhhcCCCCcEEEEE
Q 012190 179 SPTLLFLPGIDGLGL--GLILHHKPL-GKAFEVRCLHIPVYDRTP-------FEGLVKFVEETVRREHASSPEKPIYLVG 248 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~--~~~~~~~~L-~~~~~V~~~D~~G~G~Ss-------~~~~~~dl~~~i~~~~~~~~~~~i~LvG 248 (468)
...+|++||+-++.. ....++.+| ..++.++-+|++|.|.|+ ....++|+..+++++......-+ +++|
T Consensus 33 ~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~nr~v~-vi~g 111 (269)
T KOG4667|consen 33 TEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNSNRVVP-VILG 111 (269)
T ss_pred ceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccCceEEE-EEEe
Confidence 568999999988866 456677888 568999999999999994 56677999999999764311112 4799
Q ss_pred eChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChh
Q 012190 249 DSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPR 328 (468)
Q Consensus 249 hS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (468)
||-||.+++.+|.++++ +.-+|-+++.... .. . +-..+.+. .+.++....+ ...++.
T Consensus 112 HSkGg~Vvl~ya~K~~d-~~~viNcsGRydl-~~----~--I~eRlg~~-------~l~~ike~Gf--------id~~~r 168 (269)
T KOG4667|consen 112 HSKGGDVVLLYASKYHD-IRNVINCSGRYDL-KN----G--INERLGED-------YLERIKEQGF--------IDVGPR 168 (269)
T ss_pred ecCccHHHHHHHHhhcC-chheEEcccccch-hc----c--hhhhhccc-------HHHHHHhCCc--------eecCcc
Confidence 99999999999999976 5555555442211 00 0 00000000 0000000000 000000
Q ss_pred HHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhc--ccCCceEEEEEeCCCCCCCcHHHHHHHHHhC
Q 012190 329 IKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRL--HAVKAEVLVLASGKDNMLPSEDEAKRLNNSL 406 (468)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l--~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l 406 (468)
..++. ..+..+.+...+. ...-+.. -..+||||-+||..|.++|.+ ++.++++.+
T Consensus 169 --kG~y~--------------~rvt~eSlmdrLn------td~h~aclkId~~C~VLTvhGs~D~IVPve-~AkefAk~i 225 (269)
T KOG4667|consen 169 --KGKYG--------------YRVTEESLMDRLN------TDIHEACLKIDKQCRVLTVHGSEDEIVPVE-DAKEFAKII 225 (269)
T ss_pred --cCCcC--------------ceecHHHHHHHHh------chhhhhhcCcCccCceEEEeccCCceeech-hHHHHHHhc
Confidence 00000 0011112211111 1111222 234799999999999999999 799999999
Q ss_pred CCcEEEEeCCCCccccccCcHHHHHHHH
Q 012190 407 QNCIVRNFKDNGHTLLLEEGISLLTIIK 434 (468)
Q Consensus 407 ~~~~~~~i~~aGH~~~~e~p~~~~~~I~ 434 (468)
|+-++.+++|+.|.....+ .+......
T Consensus 226 ~nH~L~iIEgADHnyt~~q-~~l~~lgl 252 (269)
T KOG4667|consen 226 PNHKLEIIEGADHNYTGHQ-SQLVSLGL 252 (269)
T ss_pred cCCceEEecCCCcCccchh-hhHhhhcc
Confidence 9999999999999976543 34444444
|
|
| >PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3 | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.9e-13 Score=125.08 Aligned_cols=242 Identities=17% Similarity=0.171 Sum_probs=137.5
Q ss_pred eecCCCCCCCCCCeEEEeCCCCCchhh-HHHh-----HhhhcCCeEEEEecCCCCCCC-----------ChHHHHHHHHH
Q 012190 168 CPVDCGRPLKGSPTLLFLPGIDGLGLG-LILH-----HKPLGKAFEVRCLHIPVYDRT-----------PFEGLVKFVEE 230 (468)
Q Consensus 168 ~y~~~g~~~~~~p~lV~lHG~~~s~~~-~~~~-----~~~L~~~~~V~~~D~~G~G~S-----------s~~~~~~dl~~ 230 (468)
+...+|.+..++|++|-.|..|.+... |..+ .+.+.+.|-++-+|.||+..- +++++++++.+
T Consensus 12 ~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~ 91 (283)
T PF03096_consen 12 HVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEMLPE 91 (283)
T ss_dssp EEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----TT-----HHHHHCTHHH
T ss_pred EEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhceEEEEEeCCCCCCCcccccccccccCHHHHHHHHHH
Confidence 555567765569999999999999886 5554 356678999999999999753 68999999999
Q ss_pred HHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcch--HHHhh-Cch-hH-HhhHHHH
Q 012190 231 TVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLF--PILKA-MPD-EL-HCAVPYL 305 (468)
Q Consensus 231 ~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~--~~~~~-~~~-~~-~~~~~~~ 305 (468)
++++++. +.++.+|-..||.|.+.+|..||++|.|+||++|.... ..|..+. .+... +.. .+ ......+
T Consensus 92 Vl~~f~l----k~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~--~gw~Ew~~~K~~~~~L~~~gmt~~~~d~L 165 (283)
T PF03096_consen 92 VLDHFGL----KSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTA--AGWMEWFYQKLSSWLLYSYGMTSSVKDYL 165 (283)
T ss_dssp HHHHHT-------EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S-----HHHHHHHHHH-------CTTS-HHHHH
T ss_pred HHHhCCc----cEEEEEeeccchhhhhhccccCccceeEEEEEecCCCC--ccHHHHHHHHHhcccccccccccchHHhh
Confidence 9999654 48999999999999999999999999999999986532 2222211 00000 000 00 0011111
Q ss_pred hhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEE
Q 012190 306 LSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVL 385 (468)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI 385 (468)
+...++..... . ..++.+.+. ..+.+...+..+...++.+... .++...+....||+|++
T Consensus 166 l~h~Fg~~~~~------~-------n~Dlv~~yr------~~l~~~~Np~Nl~~f~~sy~~R-~DL~~~~~~~~c~vLlv 225 (283)
T PF03096_consen 166 LWHYFGKEEEE------N-------NSDLVQTYR------QHLDERINPKNLALFLNSYNSR-TDLSIERPSLGCPVLLV 225 (283)
T ss_dssp HHHHS-HHHHH------C-------T-HHHHHHH------HHHHT-TTHHHHHHHHHHHHT------SECTTCCS-EEEE
T ss_pred hhccccccccc------c-------cHHHHHHHH------HHHhcCCCHHHHHHHHHHHhcc-ccchhhcCCCCCCeEEE
Confidence 22222211100 0 011111111 1111222333343333333322 22344557778999999
Q ss_pred EeCCCCCCCcHHHHHHHHHhCC--CcEEEEeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 386 ASGKDNMLPSEDEAKRLNNSLQ--NCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 386 ~G~~D~~v~~~~~~~~l~~~l~--~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
.|++.+... +...+...+. ++++..++++|=.+..|+|.++++.++ -|++
T Consensus 226 vG~~Sp~~~---~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~--lFlQ 277 (283)
T PF03096_consen 226 VGDNSPHVD---DVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFK--LFLQ 277 (283)
T ss_dssp EETTSTTHH---HHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHH--HHHH
T ss_pred EecCCcchh---hHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHH--HHHc
Confidence 999877643 4556766663 678999999999999999999999998 5544
|
Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A. |
| >PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Probab=99.49 E-value=5.3e-12 Score=116.09 Aligned_cols=95 Identities=22% Similarity=0.220 Sum_probs=83.3
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC--------ChHHHHHHHHHHHHHHhhcCCCCcEEEEEe
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSPEKPIYLVGD 249 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S--------s~~~~~~dl~~~i~~~~~~~~~~~i~LvGh 249 (468)
..+||=+||.+||...|+.+.+.| ..+.+++++.+||+|.+ +-++....+.++++.+... ++++.+||
T Consensus 35 ~gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~---~~~i~~gH 111 (297)
T PF06342_consen 35 LGTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIK---GKLIFLGH 111 (297)
T ss_pred ceeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCC---CceEEEEe
Confidence 348999999999999999999999 77899999999999988 3577788888888886543 58899999
Q ss_pred ChhHHHHHHHHHhCCCCceEEEEeCCCCC
Q 012190 250 SFGGCLALAVAARNPTIDLILILSNPATS 278 (468)
Q Consensus 250 S~GG~ia~~~a~~~P~~v~~lVli~p~~~ 278 (468)
|.||-.|+.+|..+| ..|+++++|..-
T Consensus 112 SrGcenal~la~~~~--~~g~~lin~~G~ 138 (297)
T PF06342_consen 112 SRGCENALQLAVTHP--LHGLVLINPPGL 138 (297)
T ss_pred ccchHHHHHHHhcCc--cceEEEecCCcc
Confidence 999999999999996 569999999663
|
|
| >PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases | Back alignment and domain information |
|---|
Probab=99.49 E-value=6.7e-13 Score=122.57 Aligned_cols=169 Identities=20% Similarity=0.203 Sum_probs=104.7
Q ss_pred CCCeEEEeCCCCCchhhHHHhHh-hh-cCCeEEEEecCCC------CCC---C----------------ChHHHHHHHHH
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHK-PL-GKAFEVRCLHIPV------YDR---T----------------PFEGLVKFVEE 230 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~-~L-~~~~~V~~~D~~G------~G~---S----------------s~~~~~~dl~~ 230 (468)
..++|||+||+|++...+..... .+ .....+++++-|. .|. + .+++.++.+.+
T Consensus 13 ~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l~~ 92 (216)
T PF02230_consen 13 AKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERLDE 92 (216)
T ss_dssp -SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHHHH
T ss_pred CceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHHHH
Confidence 57899999999999977776655 22 3456666655431 122 1 13444556666
Q ss_pred HHHHHhhc-CCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhh
Q 012190 231 TVRREHAS-SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYV 309 (468)
Q Consensus 231 ~i~~~~~~-~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (468)
+++.+... .+.++|+|+|+|.||++|+.++.++|+.+.++|++++.......
T Consensus 93 li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~--------------------------- 145 (216)
T PF02230_consen 93 LIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESE--------------------------- 145 (216)
T ss_dssp HHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCC---------------------------
T ss_pred HHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccccc---------------------------
Confidence 66654432 35678999999999999999999999999999999874421000
Q ss_pred cCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCC
Q 012190 310 MGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGK 389 (468)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~ 389 (468)
.... .. ..-++|++++||+.
T Consensus 146 ------------------------~~~~----------------------------------~~--~~~~~pi~~~hG~~ 165 (216)
T PF02230_consen 146 ------------------------LEDR----------------------------------PE--ALAKTPILIIHGDE 165 (216)
T ss_dssp ------------------------CHCC----------------------------------HC--CCCTS-EEEEEETT
T ss_pred ------------------------cccc----------------------------------cc--ccCCCcEEEEecCC
Confidence 0000 00 11278999999999
Q ss_pred CCCCCcHHHHHHHHHhCC----CcEEEEeCCCCccccccCcHHHHHHHH
Q 012190 390 DNMLPSEDEAKRLNNSLQ----NCIVRNFKDNGHTLLLEEGISLLTIIK 434 (468)
Q Consensus 390 D~~v~~~~~~~~l~~~l~----~~~~~~i~~aGH~~~~e~p~~~~~~I~ 434 (468)
|+++|.+ ..+...+.+. ++++..+++.||.+..+.=..+.+.|.
T Consensus 166 D~vvp~~-~~~~~~~~L~~~~~~v~~~~~~g~gH~i~~~~~~~~~~~l~ 213 (216)
T PF02230_consen 166 DPVVPFE-WAEKTAEFLKAAGANVEFHEYPGGGHEISPEELRDLREFLE 213 (216)
T ss_dssp -SSSTHH-HHHHHHHHHHCTT-GEEEEEETT-SSS--HHHHHHHHHHHH
T ss_pred CCcccHH-HHHHHHHHHHhcCCCEEEEEcCCCCCCCCHHHHHHHHHHHh
Confidence 9999988 5777766653 579999999999997555454444444
|
; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A. |
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.47 E-value=4.8e-13 Score=142.08 Aligned_cols=217 Identities=17% Similarity=0.192 Sum_probs=127.5
Q ss_pred cCccCCCCCC-ceeeeecCCCCCCCCCCeEEEeCCCCCchhh--HHHhHhhh-cCCeEEEEecCCCCCCC----------
Q 012190 154 KEIIKPDGGP-PRWFCPVDCGRPLKGSPTLLFLPGIDGLGLG--LILHHKPL-GKAFEVRCLHIPVYDRT---------- 219 (468)
Q Consensus 154 ~~~~~~dg~~-~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~--~~~~~~~L-~~~~~V~~~D~~G~G~S---------- 219 (468)
-.+...||.. ..|+.....-.+.++-|+||++||.+..... |....+.| ..+|.|+.+++||-+.-
T Consensus 368 ~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~ 447 (620)
T COG1506 368 VTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRG 447 (620)
T ss_pred EEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhh
Confidence 3445667744 3443332222222235899999999766554 56667777 78999999999975432
Q ss_pred -----ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhC
Q 012190 220 -----PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAM 294 (468)
Q Consensus 220 -----s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~ 294 (468)
+.+|+.+.+. ++.... ....+++.++|||+||.+++..+.+.| .+++.+...+............
T Consensus 448 ~~g~~~~~D~~~~~~-~l~~~~-~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~~~~~~------- 517 (620)
T COG1506 448 DWGGVDLEDLIAAVD-ALVKLP-LVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYFGEST------- 517 (620)
T ss_pred ccCCccHHHHHHHHH-HHHhCC-CcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhhccccc-------
Confidence 2444444444 332211 112458999999999999999999887 6666666555331100000000
Q ss_pred chhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhh
Q 012190 295 PDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSR 374 (468)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 374 (468)
..... ........+ ...... .....+ ...
T Consensus 518 ~~~~~-----~~~~~~~~~--------------------------------------~~~~~~-----~~~~sp---~~~ 546 (620)
T COG1506 518 EGLRF-----DPEENGGGP--------------------------------------PEDREK-----YEDRSP---IFY 546 (620)
T ss_pred hhhcC-----CHHHhCCCc--------------------------------------ccChHH-----HHhcCh---hhh
Confidence 00000 000000000 000000 000000 123
Q ss_pred cccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC----CcEEEEeCCCCccccccCcHHHHHHHH
Q 012190 375 LHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ----NCIVRNFKDNGHTLLLEEGISLLTIIK 434 (468)
Q Consensus 375 l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~----~~~~~~i~~aGH~~~~e~p~~~~~~I~ 434 (468)
..++++|+|+|||+.|..++.+ ++.++.+.+. +++++++|+.||.+-- |+...+.++
T Consensus 547 ~~~i~~P~LliHG~~D~~v~~~-q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~--~~~~~~~~~ 607 (620)
T COG1506 547 ADNIKTPLLLIHGEEDDRVPIE-QAEQLVDALKRKGKPVELVVFPDEGHGFSR--PENRVKVLK 607 (620)
T ss_pred hcccCCCEEEEeecCCccCChH-HHHHHHHHHHHcCceEEEEEeCCCCcCCCC--chhHHHHHH
Confidence 4789999999999999999999 7988888774 6799999999999876 444444443
|
|
| >PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.9e-13 Score=123.91 Aligned_cols=185 Identities=18% Similarity=0.150 Sum_probs=111.8
Q ss_pred HHHhHhhh-cCCeEEEEecCCCCCCC----------C-hHHHHHHHHHHHHHHhhcC--CCCcEEEEEeChhHHHHHHHH
Q 012190 195 LILHHKPL-GKAFEVRCLHIPVYDRT----------P-FEGLVKFVEETVRREHASS--PEKPIYLVGDSFGGCLALAVA 260 (468)
Q Consensus 195 ~~~~~~~L-~~~~~V~~~D~~G~G~S----------s-~~~~~~dl~~~i~~~~~~~--~~~~i~LvGhS~GG~ia~~~a 260 (468)
|......| ++||.|+.+|+||.+.. . -...++|+.++++.+.... ..++|.++|||+||.+++.++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 34456677 78999999999998754 1 1345667777777765442 346899999999999999999
Q ss_pred HhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcch
Q 012190 261 ARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPA 340 (468)
Q Consensus 261 ~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (468)
.++|++++++|..+|............ . .... . .... ..+ .. ...
T Consensus 83 ~~~~~~f~a~v~~~g~~d~~~~~~~~~-------~--~~~~--~-~~~~-~~~-----------~~----~~~------- 127 (213)
T PF00326_consen 83 TQHPDRFKAAVAGAGVSDLFSYYGTTD-------I--YTKA--E-YLEY-GDP-----------WD----NPE------- 127 (213)
T ss_dssp HHTCCGSSEEEEESE-SSTTCSBHHTC-------C--HHHG--H-HHHH-SST-----------TT----SHH-------
T ss_pred cccceeeeeeeccceecchhccccccc-------c--cccc--c-cccc-Ccc-----------ch----hhh-------
Confidence 999999999999988654322110000 0 0000 0 0000 000 00 000
Q ss_pred hcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhccc--CCceEEEEEeCCCCCCCcHHHHHHHHHhCC----CcEEEEe
Q 012190 341 LLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHA--VKAEVLVLASGKDNMLPSEDEAKRLNNSLQ----NCIVRNF 414 (468)
Q Consensus 341 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~--i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~----~~~~~~i 414 (468)
.+..... ...+.+ +++|+|++||++|..+|+. .+.++.+.+. +++++++
T Consensus 128 ----------------------~~~~~s~--~~~~~~~~~~~P~li~hG~~D~~Vp~~-~s~~~~~~L~~~g~~~~~~~~ 182 (213)
T PF00326_consen 128 ----------------------FYRELSP--ISPADNVQIKPPVLIIHGENDPRVPPS-QSLRLYNALRKAGKPVELLIF 182 (213)
T ss_dssp ----------------------HHHHHHH--GGGGGGCGGGSEEEEEEETTBSSSTTH-HHHHHHHHHHHTTSSEEEEEE
T ss_pred ----------------------hhhhhcc--ccccccccCCCCEEEEccCCCCccCHH-HHHHHHHHHHhcCCCEEEEEc
Confidence 0000000 123344 8899999999999999999 7888877663 5899999
Q ss_pred CCCCccccc-cCcHHHHHHHHhcCcccc
Q 012190 415 KDNGHTLLL-EEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 415 ~~aGH~~~~-e~p~~~~~~I~~~~F~~r 441 (468)
|++||.+.. +...+..+.+. .|+++
T Consensus 183 p~~gH~~~~~~~~~~~~~~~~--~f~~~ 208 (213)
T PF00326_consen 183 PGEGHGFGNPENRRDWYERIL--DFFDK 208 (213)
T ss_dssp TT-SSSTTSHHHHHHHHHHHH--HHHHH
T ss_pred CcCCCCCCCchhHHHHHHHHH--HHHHH
Confidence 999995543 23333444444 45443
|
; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B .... |
| >KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=99.46 E-value=4.2e-12 Score=116.44 Aligned_cols=249 Identities=14% Similarity=0.121 Sum_probs=157.8
Q ss_pred ccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhh-HHHh-----HhhhcCCeEEEEecCCCCCCC----------
Q 012190 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLG-LILH-----HKPLGKAFEVRCLHIPVYDRT---------- 219 (468)
Q Consensus 156 ~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~-~~~~-----~~~L~~~~~V~~~D~~G~G~S---------- 219 (468)
+.+..|.. +...+|.+..++|++|=.|.++.+... |..+ +..+...|-|+-+|.|||..-
T Consensus 27 V~T~~G~v----~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~fcv~HV~~PGqe~gAp~~p~~y~y 102 (326)
T KOG2931|consen 27 VETAHGVV----HVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEHFCVYHVDAPGQEDGAPSFPEGYPY 102 (326)
T ss_pred eccccccE----EEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhheEEEecCCCccccCCccCCCCCCC
Confidence 44555443 667778876678999999999999886 5543 456666799999999998532
Q ss_pred -ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCch--
Q 012190 220 -PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPD-- 296 (468)
Q Consensus 220 -s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~-- 296 (468)
+++++++++..++++ +..+.|+-+|...||.|..++|..||++|.|+||+++... ...|..+. ...+..
T Consensus 103 Psmd~LAd~l~~VL~~----f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~--a~gwiew~--~~K~~s~~ 174 (326)
T KOG2931|consen 103 PSMDDLADMLPEVLDH----FGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPC--AKGWIEWA--YNKVSSNL 174 (326)
T ss_pred CCHHHHHHHHHHHHHh----cCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCC--CchHHHHH--HHHHHHHH
Confidence 699999999999999 5566899999999999999999999999999999998542 22222221 111110
Q ss_pred ----hH-HhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHH
Q 012190 297 ----EL-HCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYA 371 (468)
Q Consensus 297 ----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 371 (468)
.+ ......++...++.... .. ..++.+.+. ..+.+......+.-.+..+....+ +
T Consensus 175 l~~~Gmt~~~~d~ll~H~Fg~e~~---------~~----~~diVq~Yr------~~l~~~~N~~Nl~~fl~ayn~R~D-L 234 (326)
T KOG2931|consen 175 LYYYGMTQGVKDYLLAHHFGKEEL---------GN----NSDIVQEYR------QHLGERLNPKNLALFLNAYNGRRD-L 234 (326)
T ss_pred HHhhchhhhHHHHHHHHHhccccc---------cc----cHHHHHHHH------HHHHhcCChhHHHHHHHHhcCCCC-c
Confidence 00 01112222222222210 00 122222222 111122233333333333322211 1
Q ss_pred hhhc----ccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC--CcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 372 NSRL----HAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ--NCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 372 ~~~l----~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~--~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
.... ..++||+|++.|++.+.+.. .......+. ++.+..+.++|-.+..++|.++++.++ -|++.
T Consensus 235 ~~~r~~~~~tlkc~vllvvGd~Sp~~~~---vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~--~FlqG 305 (326)
T KOG2931|consen 235 SIERPKLGTTLKCPVLLVVGDNSPHVSA---VVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFK--YFLQG 305 (326)
T ss_pred cccCCCcCccccccEEEEecCCCchhhh---hhhhhcccCcccceEEEEcccCCcccccCchHHHHHHH--HHHcc
Confidence 1111 25679999999998877543 344444443 678888999999999999999999998 55544
|
|
| >TIGR01840 esterase_phb esterase, PHB depolymerase family | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.7e-12 Score=118.14 Aligned_cols=100 Identities=14% Similarity=0.153 Sum_probs=74.2
Q ss_pred CCCeEEEeCCCCCchhhHH---HhHhhh-cCCeEEEEecCCCCCCCC--h-----------HHHHHHHHHHHHHHhhcC-
Q 012190 178 GSPTLLFLPGIDGLGLGLI---LHHKPL-GKAFEVRCLHIPVYDRTP--F-----------EGLVKFVEETVRREHASS- 239 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~---~~~~~L-~~~~~V~~~D~~G~G~Ss--~-----------~~~~~dl~~~i~~~~~~~- 239 (468)
..|+||++||.+++...+. .+.... ..+|.|+++|++|++.+. + .....++.++++.+....
T Consensus 12 ~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 91 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYS 91 (212)
T ss_pred CCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcC
Confidence 4789999999999888765 233333 357999999999986431 0 123445555555554433
Q ss_pred -CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 240 -PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 240 -~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
..++++|+|||+||.+++.++.++|+.+.+++.+++..
T Consensus 92 id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 92 IDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred cChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 34589999999999999999999999999998887644
|
This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. |
| >PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.3e-12 Score=115.11 Aligned_cols=155 Identities=19% Similarity=0.240 Sum_probs=102.6
Q ss_pred EEEeCCCCCchh-hHHHh-HhhhcCCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHH
Q 012190 182 LLFLPGIDGLGL-GLILH-HKPLGKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAV 259 (468)
Q Consensus 182 lV~lHG~~~s~~-~~~~~-~~~L~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~ 259 (468)
|+++||++++.. .|.+. .+.|...++|...++ ..-+.++|.+.+.+.+.. ..++++|||||+|+..++.+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~~~V~~~~~---~~P~~~~W~~~l~~~i~~-----~~~~~ilVaHSLGc~~~l~~ 72 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENSVRVEQPDW---DNPDLDEWVQALDQAIDA-----IDEPTILVAHSLGCLTALRW 72 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTSEEEEEC-----TS--HHHHHHHHHHCCHC------TTTEEEEEETHHHHHHHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCCeEEecccc---CCCCHHHHHHHHHHHHhh-----cCCCeEEEEeCHHHHHHHHH
Confidence 689999999866 56654 455665577777666 344677888777777764 24579999999999999999
Q ss_pred H-HhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhc
Q 012190 260 A-ARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNL 338 (468)
Q Consensus 260 a-~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (468)
+ ...+.+|.|++|++|+......... +. ...+
T Consensus 73 l~~~~~~~v~g~lLVAp~~~~~~~~~~---------~~----------------------------------~~~f---- 105 (171)
T PF06821_consen 73 LAEQSQKKVAGALLVAPFDPDDPEPFP---------PE----------------------------------LDGF---- 105 (171)
T ss_dssp HHHTCCSSEEEEEEES--SCGCHHCCT---------CG----------------------------------GCCC----
T ss_pred HhhcccccccEEEEEcCCCcccccchh---------hh----------------------------------cccc----
Confidence 9 7788899999999985421000000 00 0000
Q ss_pred chhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCC
Q 012190 339 PALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNG 418 (468)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aG 418 (468)
. ......+++|.++|.+++|+++|.+ .++.+++.+ +++++.++++|
T Consensus 106 --------------~------------------~~p~~~l~~~~~viaS~nDp~vp~~-~a~~~A~~l-~a~~~~~~~~G 151 (171)
T PF06821_consen 106 --------------T------------------PLPRDPLPFPSIVIASDNDPYVPFE-RAQRLAQRL-GAELIILGGGG 151 (171)
T ss_dssp --------------T------------------TSHCCHHHCCEEEEEETTBSSS-HH-HHHHHHHHH-T-EEEEETS-T
T ss_pred --------------c------------------cCcccccCCCeEEEEcCCCCccCHH-HHHHHHHHc-CCCeEECCCCC
Confidence 0 0011334567799999999999999 799999998 89999999999
Q ss_pred ccccccC
Q 012190 419 HTLLLEE 425 (468)
Q Consensus 419 H~~~~e~ 425 (468)
|+.-.+-
T Consensus 152 Hf~~~~G 158 (171)
T PF06821_consen 152 HFNAASG 158 (171)
T ss_dssp TSSGGGT
T ss_pred CcccccC
Confidence 9987653
|
The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A. |
| >COG0400 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.40 E-value=9e-12 Score=112.46 Aligned_cols=167 Identities=20% Similarity=0.194 Sum_probs=116.2
Q ss_pred CCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCC--CC---------CC--ChHHH---HHHHHHHHHHHhhcC-
Q 012190 177 KGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPV--YD---------RT--PFEGL---VKFVEETVRREHASS- 239 (468)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G--~G---------~S--s~~~~---~~dl~~~i~~~~~~~- 239 (468)
+..|+||++||+|++...+.+....+..++.++.+.-+- .| .. +.+++ ...+.++++....+.
T Consensus 16 p~~~~iilLHG~Ggde~~~~~~~~~~~P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~~g 95 (207)
T COG0400 16 PAAPLLILLHGLGGDELDLVPLPELILPNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEEYG 95 (207)
T ss_pred CCCcEEEEEecCCCChhhhhhhhhhcCCCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHHhC
Confidence 467799999999999999999776666666666543210 11 11 12222 223333333333223
Q ss_pred -CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHH
Q 012190 240 -PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAM 318 (468)
Q Consensus 240 -~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (468)
+..+++++|+|-||.+++.+..++|+.++++|+.+|........
T Consensus 96 i~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~~----------------------------------- 140 (207)
T COG0400 96 IDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPEL----------------------------------- 140 (207)
T ss_pred CChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCcc-----------------------------------
Confidence 34799999999999999999999999999999988754321100
Q ss_pred HhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHH
Q 012190 319 VNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDE 398 (468)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~ 398 (468)
.-..-.+|++++||+.|+++|.. .
T Consensus 141 -------------------------------------------------------~~~~~~~pill~hG~~Dpvvp~~-~ 164 (207)
T COG0400 141 -------------------------------------------------------LPDLAGTPILLSHGTEDPVVPLA-L 164 (207)
T ss_pred -------------------------------------------------------ccccCCCeEEEeccCcCCccCHH-H
Confidence 00233579999999999999999 6
Q ss_pred HHHHHHhCC----CcEEEEeCCCCccccccCcHHHHHHHHh
Q 012190 399 AKRLNNSLQ----NCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (468)
Q Consensus 399 ~~~l~~~l~----~~~~~~i~~aGH~~~~e~p~~~~~~I~~ 435 (468)
+.++.+.+. +++...++ .||.+..|.-+...+.+.+
T Consensus 165 ~~~l~~~l~~~g~~v~~~~~~-~GH~i~~e~~~~~~~wl~~ 204 (207)
T COG0400 165 AEALAEYLTASGADVEVRWHE-GGHEIPPEELEAARSWLAN 204 (207)
T ss_pred HHHHHHHHHHcCCCEEEEEec-CCCcCCHHHHHHHHHHHHh
Confidence 888877664 67888888 8999987766666665553
|
|
| >PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway | Back alignment and domain information |
|---|
Probab=99.39 E-value=7.7e-12 Score=115.69 Aligned_cols=159 Identities=21% Similarity=0.200 Sum_probs=110.1
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCC---CC---------------hHHHHHHHHHHHHHHhhc
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDR---TP---------------FEGLVKFVEETVRREHAS 238 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~---Ss---------------~~~~~~dl~~~i~~~~~~ 238 (468)
+.|.||++|+..|-....+.++..| +.||.|+++|+-+-.. ++ .+...+++...++.+...
T Consensus 13 ~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~ 92 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQ 92 (218)
T ss_dssp SEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCT
T ss_pred CCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhc
Confidence 3789999999999888888889999 7789999999754433 21 234567777778877755
Q ss_pred C--CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhH
Q 012190 239 S--PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKM 316 (468)
Q Consensus 239 ~--~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
. ...+|.++|+|+||.+++.+|.+. +.+++.|...|....
T Consensus 93 ~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~------------------------------------- 134 (218)
T PF01738_consen 93 PEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPP------------------------------------- 134 (218)
T ss_dssp TTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSG-------------------------------------
T ss_pred cccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCC-------------------------------------
Confidence 3 357999999999999999999887 678888887651000
Q ss_pred HHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcH
Q 012190 317 AMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSE 396 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~ 396 (468)
... .....++++|+++++|++|+.++.+
T Consensus 135 --------------~~~--------------------------------------~~~~~~~~~P~l~~~g~~D~~~~~~ 162 (218)
T PF01738_consen 135 --------------PPP--------------------------------------LEDAPKIKAPVLILFGENDPFFPPE 162 (218)
T ss_dssp --------------GGH--------------------------------------HHHGGG--S-EEEEEETT-TTS-HH
T ss_pred --------------Ccc--------------------------------------hhhhcccCCCEeecCccCCCCCChH
Confidence 000 0123678899999999999999998
Q ss_pred HHHHHHHHhC----CCcEEEEeCCCCccccccCcH
Q 012190 397 DEAKRLNNSL----QNCIVRNFKDNGHTLLLEEGI 427 (468)
Q Consensus 397 ~~~~~l~~~l----~~~~~~~i~~aGH~~~~e~p~ 427 (468)
..+.+.+.+ ...++++++|++|........
T Consensus 163 -~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~ 196 (218)
T PF01738_consen 163 -EVEALEEALKAAGVDVEVHVYPGAGHGFANPSRP 196 (218)
T ss_dssp -HHHHHHHHHHCTTTTEEEEEETT--TTTTSTTST
T ss_pred -HHHHHHHHHHhcCCcEEEEECCCCcccccCCCCc
Confidence 577777665 478999999999998776544
|
Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A. |
| >PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics [] | Back alignment and domain information |
|---|
Probab=99.38 E-value=5.8e-11 Score=110.53 Aligned_cols=95 Identities=26% Similarity=0.311 Sum_probs=79.5
Q ss_pred CeEEEeCCCCCchhhHHHhHhhhcCC-eEEEEecCCCCCCC-----ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhH
Q 012190 180 PTLLFLPGIDGLGLGLILHHKPLGKA-FEVRCLHIPVYDRT-----PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGG 253 (468)
Q Consensus 180 p~lV~lHG~~~s~~~~~~~~~~L~~~-~~V~~~D~~G~G~S-----s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG 253 (468)
++|+|+|+.+|+...|.++++.|... +.|++++.||.+.. +++++++...+.|... .+..|++|+|||+||
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~~~~~si~~la~~y~~~I~~~---~~~gp~~L~G~S~Gg 77 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDEPPPDSIEELASRYAEAIRAR---QPEGPYVLAGWSFGG 77 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTSHEESSHHHHHHHHHHHHHHH---TSSSSEEEEEETHHH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHhhhh---CCCCCeeehccCccH
Confidence 37999999999999999999999886 99999999999733 6888888877777664 344599999999999
Q ss_pred HHHHHHHHhC---CCCceEEEEeCCCC
Q 012190 254 CLALAVAARN---PTIDLILILSNPAT 277 (468)
Q Consensus 254 ~ia~~~a~~~---P~~v~~lVli~p~~ 277 (468)
.+|..+|.+. ...+..++++++..
T Consensus 78 ~lA~E~A~~Le~~G~~v~~l~liD~~~ 104 (229)
T PF00975_consen 78 ILAFEMARQLEEAGEEVSRLILIDSPP 104 (229)
T ss_dssp HHHHHHHHHHHHTT-SESEEEEESCSS
T ss_pred HHHHHHHHHHHHhhhccCceEEecCCC
Confidence 9999999763 45688999999644
|
Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A .... |
| >TIGR03230 lipo_lipase lipoprotein lipase | Back alignment and domain information |
|---|
Probab=99.37 E-value=5.1e-12 Score=126.25 Aligned_cols=100 Identities=16% Similarity=0.059 Sum_probs=80.2
Q ss_pred CCCeEEEeCCCCCch--hhHHH-hHhhhc---CCeEEEEecCCCCCCCC-------hHHHHHHHHHHHHHHhhc--CCCC
Q 012190 178 GSPTLLFLPGIDGLG--LGLIL-HHKPLG---KAFEVRCLHIPVYDRTP-------FEGLVKFVEETVRREHAS--SPEK 242 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~--~~~~~-~~~~L~---~~~~V~~~D~~G~G~Ss-------~~~~~~dl~~~i~~~~~~--~~~~ 242 (468)
+.|++|++||++++. ..|.+ +.+.|. ..++|+++|++|+|.+. ....++++.++++.+... .+.+
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l~ 119 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPWD 119 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCCC
Confidence 578999999998764 45765 555552 36999999999999873 345567777778776432 3457
Q ss_pred cEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 243 PIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 243 ~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
+++||||||||.+|..++.++|++|.++++++|+.
T Consensus 120 ~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAg 154 (442)
T TIGR03230 120 NVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAG 154 (442)
T ss_pred cEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCC
Confidence 99999999999999999999999999999999975
|
Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity. |
| >TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II | Back alignment and domain information |
|---|
Probab=99.36 E-value=5e-11 Score=121.28 Aligned_cols=117 Identities=14% Similarity=0.009 Sum_probs=94.6
Q ss_pred ceeeeecCCCCCCCCCCeEEEeCCCCCchhhH-----HHhHhhh-cCCeEEEEecCCCCCCC----ChHHHHHHHHHHHH
Q 012190 164 PRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGL-----ILHHKPL-GKAFEVRCLHIPVYDRT----PFEGLVKFVEETVR 233 (468)
Q Consensus 164 ~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~-----~~~~~~L-~~~~~V~~~D~~G~G~S----s~~~~~~dl~~~i~ 233 (468)
...++|.+... ..-+++||++|.+-.....+ ..+++.| .+||+|+++|+++-+.. +++|+++.+.+.++
T Consensus 201 ~eLiqY~P~te-~v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r~~~ldDYv~~i~~Ald 279 (560)
T TIGR01839 201 LELIQYKPITE-QQHARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHREWGLSTYVDALKEAVD 279 (560)
T ss_pred eEEEEeCCCCC-CcCCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhcCCCHHHHHHHHHHHHH
Confidence 45667755432 13466899999998666655 3577888 88999999999887655 58999999999999
Q ss_pred HHhhcCCCCcEEEEEeChhHHHHHH----HHHhCCC-CceEEEEeCCCCCCCC
Q 012190 234 REHASSPEKPIYLVGDSFGGCLALA----VAARNPT-IDLILILSNPATSFGR 281 (468)
Q Consensus 234 ~~~~~~~~~~i~LvGhS~GG~ia~~----~a~~~P~-~v~~lVli~p~~~~~~ 281 (468)
.+....+.+++.++||||||.+++. +++++++ +|++++++.+...+..
T Consensus 280 ~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~ 332 (560)
T TIGR01839 280 AVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTM 332 (560)
T ss_pred HHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCC
Confidence 9888888899999999999999986 8889986 7999999888777654
|
This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.3e-11 Score=116.15 Aligned_cols=100 Identities=18% Similarity=0.157 Sum_probs=71.7
Q ss_pred CCeEEEeCCCCCchh---hHHHhHhhhc-CCeEEEEecC----CCCCCCChHHHHHHHHHHHHHHhhcC----CCCcEEE
Q 012190 179 SPTLLFLPGIDGLGL---GLILHHKPLG-KAFEVRCLHI----PVYDRTPFEGLVKFVEETVRREHASS----PEKPIYL 246 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~---~~~~~~~~L~-~~~~V~~~D~----~G~G~Ss~~~~~~dl~~~i~~~~~~~----~~~~i~L 246 (468)
...|||+.|++.... +...+++.|. .+|.|+-+-+ .|+|.++++.-+++|.+++++++... ..++|+|
T Consensus 33 ~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVL 112 (303)
T PF08538_consen 33 PNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSSLDRDVEEIAQLVEYLRSEKGGHFGREKIVL 112 (303)
T ss_dssp SSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--HHHHHHHHHHHHHHHHHHS------S-EEE
T ss_pred CcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcchhhhHHHHHHHHHHHHHHhhccccCCccEEE
Confidence 558999999987655 5677888884 5799888764 79999999999999999999988763 4679999
Q ss_pred EEeChhHHHHHHHHHhCC-----CCceEEEEeCCCCC
Q 012190 247 VGDSFGGCLALAVAARNP-----TIDLILILSNPATS 278 (468)
Q Consensus 247 vGhS~GG~ia~~~a~~~P-----~~v~~lVli~p~~~ 278 (468)
+|||.|+.-+++|+.... ..|+|+||-+|...
T Consensus 113 mGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSD 149 (303)
T PF08538_consen 113 MGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSD 149 (303)
T ss_dssp EEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---
T ss_pred EecCCCcHHHHHHHhccCccccccceEEEEEeCCCCC
Confidence 999999999999998752 67999999998663
|
This family contains many hypothetical proteins. ; PDB: 2Q0X_B. |
| >cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes | Back alignment and domain information |
|---|
Probab=99.33 E-value=9e-12 Score=119.00 Aligned_cols=101 Identities=15% Similarity=0.069 Sum_probs=79.8
Q ss_pred CCCeEEEeCCCCCch-hhHHHh-Hhhh-c-CCeEEEEecCCCCCCCC-------hHHHHHHHHHHHHHHhhc--CCCCcE
Q 012190 178 GSPTLLFLPGIDGLG-LGLILH-HKPL-G-KAFEVRCLHIPVYDRTP-------FEGLVKFVEETVRREHAS--SPEKPI 244 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~-~~~~~~-~~~L-~-~~~~V~~~D~~G~G~Ss-------~~~~~~dl~~~i~~~~~~--~~~~~i 244 (468)
++|++|++||++++. ..|... ...+ . .+++|+++|+++++.+. .+.+.+++..+++.+... .+.+++
T Consensus 35 ~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~~i 114 (275)
T cd00707 35 SRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTGLSLENV 114 (275)
T ss_pred CCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcCCChHHE
Confidence 478999999999988 566554 3434 3 57999999999986543 344556777777776543 345689
Q ss_pred EEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCC
Q 012190 245 YLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (468)
Q Consensus 245 ~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~ 278 (468)
+||||||||.+|..++.++|+++.++++++|+..
T Consensus 115 ~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 115 HLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred EEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 9999999999999999999999999999999764
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.3e-10 Score=112.81 Aligned_cols=205 Identities=16% Similarity=0.083 Sum_probs=116.7
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCC-C--------------------C------hHHHHHHHHH
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDR-T--------------------P------FEGLVKFVEE 230 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~-S--------------------s------~~~~~~dl~~ 230 (468)
.-|.||.+||.++....+...+..-..+|-|+.+|.||+|. + + +..+..|...
T Consensus 82 ~~Pavv~~hGyg~~~~~~~~~~~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~r 161 (320)
T PF05448_consen 82 KLPAVVQFHGYGGRSGDPFDLLPWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVR 161 (320)
T ss_dssp SEEEEEEE--TT--GGGHHHHHHHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHH
T ss_pred CcCEEEEecCCCCCCCCcccccccccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHH
Confidence 47899999999999877777666558899999999999993 2 0 2334566666
Q ss_pred HHHHHhhcC--CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCc-hhHHhhHHHHhh
Q 012190 231 TVRREHASS--PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMP-DELHCAVPYLLS 307 (468)
Q Consensus 231 ~i~~~~~~~--~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 307 (468)
.++.+.... ..++|.+.|.|+||.+++.+|+..| +|+++++..|...- ....+.... ......+..++.
T Consensus 162 avd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d-------~~~~~~~~~~~~~y~~~~~~~~ 233 (320)
T PF05448_consen 162 AVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCD-------FRRALELRADEGPYPEIRRYFR 233 (320)
T ss_dssp HHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSS-------HHHHHHHT--STTTHHHHHHHH
T ss_pred HHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccc-------hhhhhhcCCccccHHHHHHHHh
Confidence 666665432 3578999999999999999999885 69999998875532 111111111 000011111111
Q ss_pred hhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEe
Q 012190 308 YVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLAS 387 (468)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G 387 (468)
..-..+ +..+++. ..+...+. ......|+||+++-.|
T Consensus 234 ~~d~~~---------------~~~~~v~--------------------------~~L~Y~D~--~nfA~ri~~pvl~~~g 270 (320)
T PF05448_consen 234 WRDPHH---------------EREPEVF--------------------------ETLSYFDA--VNFARRIKCPVLFSVG 270 (320)
T ss_dssp HHSCTH---------------CHHHHHH--------------------------HHHHTT-H--HHHGGG--SEEEEEEE
T ss_pred ccCCCc---------------ccHHHHH--------------------------HHHhhhhH--HHHHHHcCCCEEEEEe
Confidence 000000 0011111 11111111 1233789999999999
Q ss_pred CCCCCCCcHHHHHHHHHhCC-CcEEEEeCCCCccccccC-cHHHHHHHH
Q 012190 388 GKDNMLPSEDEAKRLNNSLQ-NCIVRNFKDNGHTLLLEE-GISLLTIIK 434 (468)
Q Consensus 388 ~~D~~v~~~~~~~~l~~~l~-~~~~~~i~~aGH~~~~e~-p~~~~~~I~ 434 (468)
-.|+++||. ..-..++.++ .+++.++|..||....+. .++..+.++
T Consensus 271 l~D~~cPP~-t~fA~yN~i~~~K~l~vyp~~~He~~~~~~~~~~~~~l~ 318 (320)
T PF05448_consen 271 LQDPVCPPS-TQFAAYNAIPGPKELVVYPEYGHEYGPEFQEDKQLNFLK 318 (320)
T ss_dssp TT-SSS-HH-HHHHHHCC--SSEEEEEETT--SSTTHHHHHHHHHHHHH
T ss_pred cCCCCCCch-hHHHHHhccCCCeeEEeccCcCCCchhhHHHHHHHHHHh
Confidence 999999999 6888888886 789999999999876655 454554444
|
Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F .... |
| >PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate [] | Back alignment and domain information |
|---|
Probab=99.30 E-value=7.2e-11 Score=115.77 Aligned_cols=212 Identities=17% Similarity=0.161 Sum_probs=114.8
Q ss_pred CCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhH-hhh-cCCeEEEEecCCCCCCCC-------hHHHHHHH
Q 012190 158 KPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHH-KPL-GKAFEVRCLHIPVYDRTP-------FEGLVKFV 228 (468)
Q Consensus 158 ~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~-~~L-~~~~~V~~~D~~G~G~Ss-------~~~~~~dl 228 (468)
..++..+.+++... +. ...|+||++.|+.+....+..+. ..| ..|+.++++|+||.|.|. .+.+.+.+
T Consensus 172 ~eg~~I~g~LhlP~-~~--~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~~~l~~aV 248 (411)
T PF06500_consen 172 FEGKTIPGYLHLPS-GE--KPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDSSRLHQAV 248 (411)
T ss_dssp ETTCEEEEEEEESS-SS--S-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-CCHHHHHH
T ss_pred eCCcEEEEEEEcCC-CC--CCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCHHHHHHHH
Confidence 34444455665444 32 34789999999999987765554 566 789999999999999872 33444445
Q ss_pred HHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhh
Q 012190 229 EETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSY 308 (468)
Q Consensus 229 ~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (468)
.+.+.... .....+|.++|.|+||.+|..+|..++++++++|..+++...--. -.......|......+ ..
T Consensus 249 Ld~L~~~p-~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft----~~~~~~~~P~my~d~L----A~ 319 (411)
T PF06500_consen 249 LDYLASRP-WVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFT----DPEWQQRVPDMYLDVL----AS 319 (411)
T ss_dssp HHHHHHST-TEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-----HHHHTTS-HHHHHHH----HH
T ss_pred HHHHhcCC-ccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhc----cHHHHhcCCHHHHHHH----HH
Confidence 44444421 123568999999999999999999999999999999986522100 0011222222111111 11
Q ss_pred hcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhc--ccCCceEEEEE
Q 012190 309 VMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRL--HAVKAEVLVLA 386 (468)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l--~~i~~PvLlI~ 386 (468)
.++.. ..+ .+.+...+..++ +.. ...+ .+.++|+|.+.
T Consensus 320 rlG~~----------~~~----~~~l~~el~~~S---------Lk~-----------------qGlL~~rr~~~plL~i~ 359 (411)
T PF06500_consen 320 RLGMA----------AVS----DESLRGELNKFS---------LKT-----------------QGLLSGRRCPTPLLAIN 359 (411)
T ss_dssp HCT-S----------CE-----HHHHHHHGGGGS---------TTT-----------------TTTTTSS-BSS-EEEEE
T ss_pred HhCCc----------cCC----HHHHHHHHHhcC---------cch-----------------hccccCCCCCcceEEee
Confidence 10000 000 111111110000 000 1122 67889999999
Q ss_pred eCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCC-cccc
Q 012190 387 SGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNG-HTLL 422 (468)
Q Consensus 387 G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aG-H~~~ 422 (468)
|++|.++|.+ +.+.++..-.+.+...++... |..+
T Consensus 360 ~~~D~v~P~e-D~~lia~~s~~gk~~~~~~~~~~~gy 395 (411)
T PF06500_consen 360 GEDDPVSPIE-DSRLIAESSTDGKALRIPSKPLHMGY 395 (411)
T ss_dssp ETT-SSS-HH-HHHHHHHTBTT-EEEEE-SSSHHHHH
T ss_pred cCCCCCCCHH-HHHHHHhcCCCCceeecCCCccccch
Confidence 9999999999 788888887778888887544 4443
|
This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C. |
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=7e-11 Score=126.52 Aligned_cols=226 Identities=17% Similarity=0.121 Sum_probs=139.1
Q ss_pred ccCCCCCC-ceeeeecCCCCCCCCCCeEEEeCCCCCchh--hHHHhHhhh-cCCeEEEEecCCCCCCC------------
Q 012190 156 IIKPDGGP-PRWFCPVDCGRPLKGSPTLLFLPGIDGLGL--GLILHHKPL-GKAFEVRCLHIPVYDRT------------ 219 (468)
Q Consensus 156 ~~~~dg~~-~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~--~~~~~~~~L-~~~~~V~~~D~~G~G~S------------ 219 (468)
+...||.. +.|+.|.+........|+||++||..+... .|......| ++||.|...+.||-|+-
T Consensus 421 ~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~ 500 (686)
T PRK10115 421 ITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLK 500 (686)
T ss_pred EECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhc
Confidence 44567765 456666553222234699999999877764 455555555 88999999999986532
Q ss_pred ---ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCch
Q 012190 220 ---PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPD 296 (468)
Q Consensus 220 ---s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~ 296 (468)
+++|+.+.+..+++.-. ....++.+.|.|.||.++..++.++|++++++|+..|.......... ..++.
T Consensus 501 k~~~~~D~~a~~~~Lv~~g~--~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~------~~~p~ 572 (686)
T PRK10115 501 KKNTFNDYLDACDALLKLGY--GSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLD------ESIPL 572 (686)
T ss_pred CCCcHHHHHHHHHHHHHcCC--CChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhccc------CCCCC
Confidence 45666666655554411 13568999999999999999999999999999998875532111000 00000
Q ss_pred hHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcc
Q 012190 297 ELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLH 376 (468)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~ 376 (468)
... . ....++|.. + .....+..... ...+.
T Consensus 573 ~~~-----~-~~e~G~p~~----------------~--------------------------~~~~~l~~~SP--~~~v~ 602 (686)
T PRK10115 573 TTG-----E-FEEWGNPQD----------------P--------------------------QYYEYMKSYSP--YDNVT 602 (686)
T ss_pred Chh-----H-HHHhCCCCC----------------H--------------------------HHHHHHHHcCc--hhccC
Confidence 000 0 000111100 0 00011111111 12446
Q ss_pred cCCce-EEEEEeCCCCCCCcHHHHHHHHHhCC----CcEEEEe---CCCCccccccCcHHHHHHHHhcCccc
Q 012190 377 AVKAE-VLVLASGKDNMLPSEDEAKRLNNSLQ----NCIVRNF---KDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 377 ~i~~P-vLlI~G~~D~~v~~~~~~~~l~~~l~----~~~~~~i---~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
+++.| +|+++|.+|..||+. ++.++.+.+. +.+++++ +++||..--.+-+.+.+.-..+.|+.
T Consensus 603 ~~~~P~lLi~~g~~D~RV~~~-~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~~~r~~~~~~~A~~~aFl~ 673 (686)
T PRK10115 603 AQAYPHLLVTTGLHDSQVQYW-EPAKWVAKLRELKTDDHLLLLCTDMDSGHGGKSGRFKSYEGVAMEYAFLI 673 (686)
T ss_pred ccCCCceeEEecCCCCCcCch-HHHHHHHHHHhcCCCCceEEEEecCCCCCCCCcCHHHHHHHHHHHHHHHH
Confidence 67899 567799999999999 7888887774 4567777 89999955545555555555555654
|
|
| >PRK10162 acetyl esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.7e-10 Score=112.83 Aligned_cols=102 Identities=20% Similarity=0.071 Sum_probs=75.4
Q ss_pred CCCeEEEeCCCC---CchhhHHHhHhhhc--CCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhh---cC--CCCcEEEE
Q 012190 178 GSPTLLFLPGID---GLGLGLILHHKPLG--KAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHA---SS--PEKPIYLV 247 (468)
Q Consensus 178 ~~p~lV~lHG~~---~s~~~~~~~~~~L~--~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~---~~--~~~~i~Lv 247 (468)
+.|+||++||.+ ++...|..++..|. .++.|+.+|+|...+..+....+|+.+.++.+.. .. ..++|+|+
T Consensus 80 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~ 159 (318)
T PRK10162 80 SQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFPQAIEEIVAVCCYFHQHAEDYGINMSRIGFA 159 (318)
T ss_pred CCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHhHHHhCCChhHEEEE
Confidence 368999999976 55667778888884 4799999999988776655455555544444321 12 34689999
Q ss_pred EeChhHHHHHHHHHhC------CCCceEEEEeCCCCCC
Q 012190 248 GDSFGGCLALAVAARN------PTIDLILILSNPATSF 279 (468)
Q Consensus 248 GhS~GG~ia~~~a~~~------P~~v~~lVli~p~~~~ 279 (468)
|+|+||.+|+.++.+. +..+.++|++.|....
T Consensus 160 G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 160 GDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGL 197 (318)
T ss_pred EECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCC
Confidence 9999999999988753 3678999999886643
|
|
| >PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function | Back alignment and domain information |
|---|
Probab=99.26 E-value=2.5e-09 Score=101.58 Aligned_cols=100 Identities=22% Similarity=0.306 Sum_probs=85.4
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhh----cCCeEEEEecCCCCCCC-------------ChHHHHHHHHHHHHHHhhcC--
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPL----GKAFEVRCLHIPVYDRT-------------PFEGLVKFVEETVRREHASS-- 239 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L----~~~~~V~~~D~~G~G~S-------------s~~~~~~dl~~~i~~~~~~~-- 239 (468)
++.+||++|.+|-...|..+++.| ...+.|+++.+.||..+ ++++.++...+++++.....
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 457999999999999999988777 25799999999999643 46778888888888777643
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCC---CCceEEEEeCCCCC
Q 012190 240 PEKPIYLVGDSFGGCLALAVAARNP---TIDLILILSNPATS 278 (468)
Q Consensus 240 ~~~~i~LvGhS~GG~ia~~~a~~~P---~~v~~lVli~p~~~ 278 (468)
+..+++|+|||.|+.++++++.+++ .+|.+++++-|...
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~ 123 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIE 123 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccc
Confidence 5779999999999999999999999 78999999998763
|
|
| >TIGR00976 /NonD putative hydrolase, CocE/NonD family | Back alignment and domain information |
|---|
Probab=99.24 E-value=9.5e-11 Score=123.28 Aligned_cols=120 Identities=12% Similarity=-0.025 Sum_probs=89.9
Q ss_pred CCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchh---hH-HHhHhhh-cCCeEEEEecCCCCCCCC-----h-HHHHH
Q 012190 158 KPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGL---GL-ILHHKPL-GKAFEVRCLHIPVYDRTP-----F-EGLVK 226 (468)
Q Consensus 158 ~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~---~~-~~~~~~L-~~~~~V~~~D~~G~G~Ss-----~-~~~~~ 226 (468)
..||..+....|.+.+. ...|+||++||++.+.. .+ ......| .++|.|+++|+||+|.|+ + ...++
T Consensus 3 ~~DG~~L~~~~~~P~~~--~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~~~~~~ 80 (550)
T TIGR00976 3 MRDGTRLAIDVYRPAGG--GPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLGSDEAA 80 (550)
T ss_pred CCCCCEEEEEEEecCCC--CCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEecCcccch
Confidence 45666654434444432 24789999999997653 12 2233455 789999999999999994 2 56788
Q ss_pred HHHHHHHHHhhc-CCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCC
Q 012190 227 FVEETVRREHAS-SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSF 279 (468)
Q Consensus 227 dl~~~i~~~~~~-~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~ 279 (468)
|+.++++.+..+ ....+|.++|||+||.+++.+|+++|+.++++|..++....
T Consensus 81 D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~ 134 (550)
T TIGR00976 81 DGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDL 134 (550)
T ss_pred HHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccch
Confidence 888888887644 23468999999999999999999999999999998876543
|
This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. |
| >COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.3e-10 Score=98.88 Aligned_cols=168 Identities=20% Similarity=0.224 Sum_probs=117.4
Q ss_pred CCCCeEEEeCCCC-----CchhhHHHhHhhh-cCCeEEEEecCCCCCCCC--hH---HHHHHHHHHHHHHhhcCCCCcE-
Q 012190 177 KGSPTLLFLPGID-----GLGLGLILHHKPL-GKAFEVRCLHIPVYDRTP--FE---GLVKFVEETVRREHASSPEKPI- 244 (468)
Q Consensus 177 ~~~p~lV~lHG~~-----~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss--~~---~~~~dl~~~i~~~~~~~~~~~i- 244 (468)
+..|..|++|-.+ .+......+...| ..+|.++-+|+||-|+|. ++ .-.+|....++.++.+.+..+.
T Consensus 26 ~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE~~Da~aaldW~~~~hp~s~~~ 105 (210)
T COG2945 26 PAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIGELEDAAAALDWLQARHPDSASC 105 (210)
T ss_pred CCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCCcchHHHHHHHHHHHHhhCCCchhh
Confidence 4577788888543 2233455566777 778999999999999993 21 2244556666666666776665
Q ss_pred EEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccC
Q 012190 245 YLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENR 324 (468)
Q Consensus 245 ~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (468)
.|.|+|+||.|++.+|.+.|+. ...+.+.|....
T Consensus 106 ~l~GfSFGa~Ia~~la~r~~e~-~~~is~~p~~~~--------------------------------------------- 139 (210)
T COG2945 106 WLAGFSFGAYIAMQLAMRRPEI-LVFISILPPINA--------------------------------------------- 139 (210)
T ss_pred hhcccchHHHHHHHHHHhcccc-cceeeccCCCCc---------------------------------------------
Confidence 7899999999999999999763 344444432210
Q ss_pred CChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHH
Q 012190 325 LPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNN 404 (468)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~ 404 (468)
+. ...+....+|.++|+|+.|.+++.. ...+..+
T Consensus 140 ----------------------------------~d-----------fs~l~P~P~~~lvi~g~~Ddvv~l~-~~l~~~~ 173 (210)
T COG2945 140 ----------------------------------YD-----------FSFLAPCPSPGLVIQGDADDVVDLV-AVLKWQE 173 (210)
T ss_pred ----------------------------------hh-----------hhhccCCCCCceeEecChhhhhcHH-HHHHhhc
Confidence 00 0123566889999999999999888 5666666
Q ss_pred hCCCcEEEEeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 405 SLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 405 ~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
. ...+++++++++||.+- +-..+.+.|. +|+.
T Consensus 174 ~-~~~~~i~i~~a~HFF~g-Kl~~l~~~i~--~~l~ 205 (210)
T COG2945 174 S-IKITVITIPGADHFFHG-KLIELRDTIA--DFLE 205 (210)
T ss_pred C-CCCceEEecCCCceecc-cHHHHHHHHH--HHhh
Confidence 6 46788999999999975 4455666666 5663
|
|
| >PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.6e-09 Score=100.36 Aligned_cols=100 Identities=19% Similarity=0.172 Sum_probs=73.4
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC----ChHHHHHHHHHHHHHHhhcC------CCCcEEEE
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT----PFEGLVKFVEETVRREHASS------PEKPIYLV 247 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S----s~~~~~~dl~~~i~~~~~~~------~~~~i~Lv 247 (468)
-|++||+||+......|..+++++ +.||-|+++|+...+.. +.+...+.+..+.+.+...+ ...++.|.
T Consensus 17 yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~ 96 (259)
T PF12740_consen 17 YPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDDTDEVASAAEVIDWLAKGLESKLPLGVKPDFSKLALA 96 (259)
T ss_pred cCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCCcchhHHHHHHHHHHHHhcchhhccccccccccceEEe
Confidence 789999999998888899999999 77899999996543332 22222222222222222121 23589999
Q ss_pred EeChhHHHHHHHHHhC-----CCCceEEEEeCCCCC
Q 012190 248 GDSFGGCLALAVAARN-----PTIDLILILSNPATS 278 (468)
Q Consensus 248 GhS~GG~ia~~~a~~~-----P~~v~~lVli~p~~~ 278 (468)
|||-||-+|..++..+ +.+++++|+++|..+
T Consensus 97 GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG 132 (259)
T PF12740_consen 97 GHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDG 132 (259)
T ss_pred eeCCCCHHHHHHHhhhcccccccceeEEEEeccccc
Confidence 9999999999999887 568999999999764
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.3e-09 Score=99.89 Aligned_cols=155 Identities=19% Similarity=0.212 Sum_probs=120.9
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCC-CCC------------------ChHHHHHHHHHHHHHHhhc
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVY-DRT------------------PFEGLVKFVEETVRREHAS 238 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~-G~S------------------s~~~~~~dl~~~i~~~~~~ 238 (468)
.|.||++|+..|-....+...+.| ..||.|+++|+-+. |.+ +..+...|+...++.+...
T Consensus 27 ~P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~ 106 (236)
T COG0412 27 FPGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQ 106 (236)
T ss_pred CCEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhC
Confidence 389999999999999999999999 77899999998652 222 1356778888888887754
Q ss_pred C--CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhH
Q 012190 239 S--PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKM 316 (468)
Q Consensus 239 ~--~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
. ..++|.++|+||||.+++.++.+.| .+++.+..-+.......
T Consensus 107 ~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~~~---------------------------------- 151 (236)
T COG0412 107 PQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIADDT---------------------------------- 151 (236)
T ss_pred CCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCCcc----------------------------------
Confidence 3 3567999999999999999999887 78888886553210000
Q ss_pred HHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcH
Q 012190 317 AMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSE 396 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~ 396 (468)
....++++|+|+++|+.|..+|..
T Consensus 152 --------------------------------------------------------~~~~~~~~pvl~~~~~~D~~~p~~ 175 (236)
T COG0412 152 --------------------------------------------------------ADAPKIKVPVLLHLAGEDPYIPAA 175 (236)
T ss_pred --------------------------------------------------------cccccccCcEEEEecccCCCCChh
Confidence 011578999999999999999998
Q ss_pred HHHHHHHHhCC----CcEEEEeCCCCccccccC
Q 012190 397 DEAKRLNNSLQ----NCIVRNFKDNGHTLLLEE 425 (468)
Q Consensus 397 ~~~~~l~~~l~----~~~~~~i~~aGH~~~~e~ 425 (468)
..+.+.+.+. +.++.+++++.|..+-+.
T Consensus 176 -~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~ 207 (236)
T COG0412 176 -DVDALAAALEDAGVKVDLEIYPGAGHGFANDR 207 (236)
T ss_pred -HHHHHHHHHHhcCCCeeEEEeCCCccccccCC
Confidence 6777777663 568899999989988553
|
|
| >TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family | Back alignment and domain information |
|---|
Probab=99.15 E-value=3.6e-10 Score=119.88 Aligned_cols=86 Identities=15% Similarity=0.216 Sum_probs=72.4
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhc-CCeEEEEecCCCCCCCC------------------------------hHHHHH
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVYDRTP------------------------------FEGLVK 226 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~-~~~~V~~~D~~G~G~Ss------------------------------~~~~~~ 226 (468)
+.|+|||+||++++...|..+++.|. .+|+|+++|+||||+|. +++.+.
T Consensus 448 g~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~ 527 (792)
T TIGR03502 448 GWPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSIL 527 (792)
T ss_pred CCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHH
Confidence 35789999999999999999999994 78999999999999882 456677
Q ss_pred HHHHHHHHHh------hc------CCCCcEEEEEeChhHHHHHHHHHhC
Q 012190 227 FVEETVRREH------AS------SPEKPIYLVGDSFGGCLALAVAARN 263 (468)
Q Consensus 227 dl~~~i~~~~------~~------~~~~~i~LvGhS~GG~ia~~~a~~~ 263 (468)
|+..+...+. .. .+..+++++||||||.+++.++...
T Consensus 528 Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 528 DLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred HHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 8887777776 22 3467999999999999999999763
|
Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae |
| >TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular | Back alignment and domain information |
|---|
Probab=99.15 E-value=3.7e-09 Score=104.79 Aligned_cols=112 Identities=15% Similarity=0.062 Sum_probs=82.5
Q ss_pred eeeeecCCCCCC-CCCCeEEEeCCCCCchhhH-HHhHhhhcCCeEEEEecCCCCC-------CCChHHHHHHHHHHHHHH
Q 012190 165 RWFCPVDCGRPL-KGSPTLLFLPGIDGLGLGL-ILHHKPLGKAFEVRCLHIPVYD-------RTPFEGLVKFVEETVRRE 235 (468)
Q Consensus 165 ~~~~y~~~g~~~-~~~p~lV~lHG~~~s~~~~-~~~~~~L~~~~~V~~~D~~G~G-------~Ss~~~~~~dl~~~i~~~ 235 (468)
+.++|.+..... ...|+||++..+.+....+ +.+++.|-.++.|+..|+.--+ .=+++|+++.+.++++++
T Consensus 87 ~L~~y~~~~~~~~~~~~pvLiV~Pl~g~~~~L~RS~V~~Ll~g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~ 166 (406)
T TIGR01849 87 RLIHFKRQGFRAELPGPAVLIVAPMSGHYATLLRSTVEALLPDHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFL 166 (406)
T ss_pred EEEEECCCCcccccCCCcEEEEcCCchHHHHHHHHHHHHHhCCCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHh
Confidence 345565443211 1136899999888776654 4577888449999999985544 337899999999999874
Q ss_pred hhcCCCCcEEEEEeChhHHHHHHHHHhC-----CCCceEEEEeCCCCCCCC
Q 012190 236 HASSPEKPIYLVGDSFGGCLALAVAARN-----PTIDLILILSNPATSFGR 281 (468)
Q Consensus 236 ~~~~~~~~i~LvGhS~GG~ia~~~a~~~-----P~~v~~lVli~p~~~~~~ 281 (468)
+. +++++|+|+||..++.+++.+ |..++.++++.++..+..
T Consensus 167 ----G~-~v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~ 212 (406)
T TIGR01849 167 ----GP-DIHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARA 212 (406)
T ss_pred ----CC-CCcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCC
Confidence 33 389999999999977766664 677999999998887654
|
This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some |
| >KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.15 E-value=6.5e-10 Score=105.00 Aligned_cols=143 Identities=19% Similarity=0.179 Sum_probs=98.4
Q ss_pred HHHHhhcCCC--cchHHHHHHhccCccCC-CCCCceeeeecCCCCC-CCCCCeEEEeCCCCCchhhHHHhHhhhcC----
Q 012190 133 LEVLWDDGYG--TDSVKDYLDAAKEIIKP-DGGPPRWFCPVDCGRP-LKGSPTLLFLPGIDGLGLGLILHHKPLGK---- 204 (468)
Q Consensus 133 ~~~~~~~~~~--~~~~~~y~~~~~~~~~~-dg~~~~~~~y~~~g~~-~~~~p~lV~lHG~~~s~~~~~~~~~~L~~---- 204 (468)
...+|.+.|. .+..+.++..-..+.+. .|...-++|..+...+ .+.--+++++||++|+-..|..+++.|.+
T Consensus 102 vv~ywr~~y~~~W~e~e~~ln~f~qykTeIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~h 181 (469)
T KOG2565|consen 102 VVEYWRDLYLPKWKEREEFLNQFKQYKTEIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRH 181 (469)
T ss_pred HHHHHHHhhcccHHHHHHHHHhhhhhhhhhcceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCcccc
Confidence 5567778887 23333455544444433 4555455554433221 12233799999999999999999988832
Q ss_pred ------CeEEEEecCCCCCCCCh----HHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeC
Q 012190 205 ------AFEVRCLHIPVYDRTPF----EGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSN 274 (468)
Q Consensus 205 ------~~~V~~~D~~G~G~Ss~----~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~ 274 (468)
.|+|+|+.+||+|.|+- .--+...+.+++.+-.+++-.++++-|-.||+.|+..+|..+|+.|.|+-+-.
T Consensus 182 g~~~d~~FEVI~PSlPGygwSd~~sk~GFn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm 261 (469)
T KOG2565|consen 182 GNESDYAFEVIAPSLPGYGWSDAPSKTGFNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNM 261 (469)
T ss_pred CCccceeEEEeccCCCCcccCcCCccCCccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhcc
Confidence 38999999999998841 11122334444555555777899999999999999999999999999987744
Q ss_pred C
Q 012190 275 P 275 (468)
Q Consensus 275 p 275 (468)
+
T Consensus 262 ~ 262 (469)
T KOG2565|consen 262 C 262 (469)
T ss_pred c
Confidence 4
|
|
| >PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.4e-09 Score=95.51 Aligned_cols=87 Identities=22% Similarity=0.353 Sum_probs=64.0
Q ss_pred EEEeCCCCCchhhHHH--hHhhhc---CCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHH
Q 012190 182 LLFLPGIDGLGLGLIL--HHKPLG---KAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLA 256 (468)
Q Consensus 182 lV~lHG~~~s~~~~~~--~~~~L~---~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia 256 (468)
|+++|||.++....+. +.+.++ ....+.++|++.+ .++..+.+.++++. .....+.|||.||||..|
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~~----p~~a~~~l~~~i~~----~~~~~~~liGSSlGG~~A 73 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPPF----PEEAIAQLEQLIEE----LKPENVVLIGSSLGGFYA 73 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCcC----HHHHHHHHHHHHHh----CCCCCeEEEEEChHHHHH
Confidence 7999999999986654 233443 3467888887744 35566777777776 344458999999999999
Q ss_pred HHHHHhCCCCceEEEEeCCCCCC
Q 012190 257 LAVAARNPTIDLILILSNPATSF 279 (468)
Q Consensus 257 ~~~a~~~P~~v~~lVli~p~~~~ 279 (468)
..+|.+++ +.+ ||++|+..+
T Consensus 74 ~~La~~~~--~~a-vLiNPav~p 93 (187)
T PF05728_consen 74 TYLAERYG--LPA-VLINPAVRP 93 (187)
T ss_pred HHHHHHhC--CCE-EEEcCCCCH
Confidence 99999984 333 999997643
|
One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised. |
| >COG4757 Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.3e-09 Score=96.80 Aligned_cols=245 Identities=16% Similarity=0.099 Sum_probs=133.6
Q ss_pred ccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCCC----------hHHH
Q 012190 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTP----------FEGL 224 (468)
Q Consensus 156 ~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss----------~~~~ 224 (468)
+..+||....--++...+. ...-++.-.+.+-....|++++... ..+|+|+++|+||.|.|+ +.|+
T Consensus 10 l~~~DG~~l~~~~~pA~~~---~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~Dw 86 (281)
T COG4757 10 LPAPDGYSLPGQRFPADGK---ASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDW 86 (281)
T ss_pred cccCCCccCccccccCCCC---CCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhh
Confidence 4566766532223322222 1223444455555555777788888 668999999999999983 5666
Q ss_pred H-HHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCch-----hH
Q 012190 225 V-KFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPD-----EL 298 (468)
Q Consensus 225 ~-~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~-----~~ 298 (468)
+ .|+...++.++...+..|.+.||||+||.+.-.+. .+| +..+....+..... ..+......+..+.- ..
T Consensus 87 A~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~-~~~-k~~a~~vfG~gagw--sg~m~~~~~l~~~~l~~lv~p~ 162 (281)
T COG4757 87 ARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLG-QHP-KYAAFAVFGSGAGW--SGWMGLRERLGAVLLWNLVGPP 162 (281)
T ss_pred hhcchHHHHHHHHhhCCCCceEEeeccccceeecccc-cCc-ccceeeEecccccc--ccchhhhhcccceeeccccccc
Confidence 6 48888888888777888999999999999866444 444 44444444433321 111111000000000 00
Q ss_pred HhhHH-HHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhccc
Q 012190 299 HCAVP-YLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHA 377 (468)
Q Consensus 299 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ 377 (468)
-..++ .+-..+.+.. ..+ .....+++..+.+. +...+.. -......+..+.
T Consensus 163 lt~w~g~~p~~l~G~G---------~d~-----p~~v~RdW~RwcR~--------p~y~fdd------p~~~~~~q~yaa 214 (281)
T COG4757 163 LTFWKGYMPKDLLGLG---------SDL-----PGTVMRDWARWCRH--------PRYYFDD------PAMRNYRQVYAA 214 (281)
T ss_pred hhhccccCcHhhcCCC---------ccC-----cchHHHHHHHHhcC--------ccccccC------hhHhHHHHHHHH
Confidence 00000 0001111111 111 11111111111000 0000000 000111345588
Q ss_pred CCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEE--eCC----CCccccccCc-HHHHHHHHhc
Q 012190 378 VKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRN--FKD----NGHTLLLEEG-ISLLTIIKGT 436 (468)
Q Consensus 378 i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~--i~~----aGH~~~~e~p-~~~~~~I~~~ 436 (468)
+.+|++.+...+|+.+|+. ..+.+.+..+++.+.. ++. -||+-..-+| |.+-+.+.+|
T Consensus 215 VrtPi~~~~~~DD~w~P~A-s~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w 279 (281)
T COG4757 215 VRTPITFSRALDDPWAPPA-SRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGW 279 (281)
T ss_pred hcCceeeeccCCCCcCCHH-HHHHHHHhhhcCcccceecCcccCcccchhhhccchHHHHHHHHHh
Confidence 9999999999999999999 6999999888775443 443 5999988887 6666666543
|
|
| >PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases | Back alignment and domain information |
|---|
Probab=99.10 E-value=7.1e-09 Score=93.02 Aligned_cols=235 Identities=15% Similarity=0.130 Sum_probs=116.3
Q ss_pred CCCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCC-CCC-------ChHHHHHHHHHHHHHHhhcCCCCcEEEE
Q 012190 177 KGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVY-DRT-------PFEGLVKFVEETVRREHASSPEKPIYLV 247 (468)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~-G~S-------s~~~~~~dl~~~i~~~~~~~~~~~i~Lv 247 (468)
+..++||+.+||+-....|..++.+| ..||+|+-||--.| |.| ++....+++..+++.+.. .+..++.|+
T Consensus 28 ~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~eftms~g~~sL~~V~dwl~~-~g~~~~GLI 106 (294)
T PF02273_consen 28 KRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINEFTMSIGKASLLTVIDWLAT-RGIRRIGLI 106 (294)
T ss_dssp --S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B-------------HHHHHHHHHHHHHHHHH-TT---EEEE
T ss_pred ccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCChhhcchHHhHHHHHHHHHHHHh-cCCCcchhh
Confidence 45689999999999999999999999 78999999998766 666 477888889988888884 466789999
Q ss_pred EeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCCh
Q 012190 248 GDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPP 327 (468)
Q Consensus 248 GhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (468)
.-|+.|-+|+..|++- .+.-+|.+-+.... ...++..... . +.+.+
T Consensus 107 AaSLSaRIAy~Va~~i--~lsfLitaVGVVnl--------r~TLe~al~~--D--------yl~~~-------------- 152 (294)
T PF02273_consen 107 AASLSARIAYEVAADI--NLSFLITAVGVVNL--------RDTLEKALGY--D--------YLQLP-------------- 152 (294)
T ss_dssp EETTHHHHHHHHTTTS----SEEEEES--S-H--------HHHHHHHHSS-----------GGGS---------------
T ss_pred hhhhhHHHHHHHhhcc--CcceEEEEeeeeeH--------HHHHHHHhcc--c--------hhhcc--------------
Confidence 9999999999999964 46667776543211 1111110000 0 00000
Q ss_pred hHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHh---HHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHH
Q 012190 328 RIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSAS---AYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNN 404 (468)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~ 404 (468)
.+++-..+. . ....-+...+..+.+...- ......+..+.+|++.+++++|.++... +...+..
T Consensus 153 ---i~~lp~dld-------f--eGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~-eV~~~~~ 219 (294)
T PF02273_consen 153 ---IEQLPEDLD-------F--EGHNLGAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQS-EVEELLD 219 (294)
T ss_dssp ---GGG--SEEE-------E--TTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS-HH-HHHHHHT
T ss_pred ---hhhCCCccc-------c--cccccchHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCCCccccHH-HHHHHHH
Confidence 000000000 0 0011112222222222111 1113455788999999999999999998 6888887
Q ss_pred hCC--CcEEEEeCCCCccccccCcHHHH---HHHHhcCcccccCCCCCCCCCCCCCHHHHH
Q 012190 405 SLQ--NCIVRNFKDNGHTLLLEEGISLL---TIIKGTCKYRRSRKLDSVADFLPPSRQEFK 460 (468)
Q Consensus 405 ~l~--~~~~~~i~~aGH~~~~e~p~~~~---~~I~~~~F~~r~~~~~~v~~~~~~~~~~~~ 460 (468)
.+. .++++.++|++|.+- |++.... +.+.+...--.....|...+++.|+.+.+-
T Consensus 220 ~~~s~~~klysl~Gs~HdL~-enl~vlrnfy~svtkaaiald~~~~~l~~~~~ep~fe~lt 279 (294)
T PF02273_consen 220 NINSNKCKLYSLPGSSHDLG-ENLVVLRNFYQSVTKAAIALDSGSLDLDIDIIEPTFEDLT 279 (294)
T ss_dssp T-TT--EEEEEETT-SS-TT-SSHHHHHHHHHHHHHHHHHHHTT------------HHHHH
T ss_pred hcCCCceeEEEecCccchhh-hChHHHHHHHHHHHHHHHhhcCCceeeeccccCCCHHHHH
Confidence 554 789999999999985 4443322 222222222234446888899999988753
|
Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B. |
| >COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.9e-09 Score=91.16 Aligned_cols=155 Identities=18% Similarity=0.188 Sum_probs=108.2
Q ss_pred CeEEEeCCCCCchh-hHHHhH-hhhcCCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHH
Q 012190 180 PTLLFLPGIDGLGL-GLILHH-KPLGKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLAL 257 (468)
Q Consensus 180 p~lV~lHG~~~s~~-~~~~~~-~~L~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~ 257 (468)
+.+|++||+.+|+. .|.... ..|. .+..++++--..-..++|++.+...+... .++++||+||+|+..++
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~---~a~rveq~~w~~P~~~dWi~~l~~~v~a~-----~~~~vlVAHSLGc~~v~ 74 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALP---NARRVEQDDWEAPVLDDWIARLEKEVNAA-----EGPVVLVAHSLGCATVA 74 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCc---cchhcccCCCCCCCHHHHHHHHHHHHhcc-----CCCeEEEEecccHHHHH
Confidence 46899999988875 454433 2222 24445555555557888888888888762 45799999999999999
Q ss_pred HHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhh
Q 012190 258 AVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNN 337 (468)
Q Consensus 258 ~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (468)
.++.+....|.|++|++|+..-....... ....
T Consensus 75 h~~~~~~~~V~GalLVAppd~~~~~~~~~-----------------------------------------------~~~t 107 (181)
T COG3545 75 HWAEHIQRQVAGALLVAPPDVSRPEIRPK-----------------------------------------------HLMT 107 (181)
T ss_pred HHHHhhhhccceEEEecCCCccccccchh-----------------------------------------------hccc
Confidence 99999878999999999854221100000 0000
Q ss_pred cchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCC
Q 012190 338 LPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDN 417 (468)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~a 417 (468)
+. ........-|.+++++.+|++++++ .++.+++.. ++.++.+.++
T Consensus 108 --------------f~------------------~~p~~~lpfps~vvaSrnDp~~~~~-~a~~~a~~w-gs~lv~~g~~ 153 (181)
T COG3545 108 --------------FD------------------PIPREPLPFPSVVVASRNDPYVSYE-HAEDLANAW-GSALVDVGEG 153 (181)
T ss_pred --------------cC------------------CCccccCCCceeEEEecCCCCCCHH-HHHHHHHhc-cHhheecccc
Confidence 00 0112455679999999999999999 799999888 5777888888
Q ss_pred Cccccc
Q 012190 418 GHTLLL 423 (468)
Q Consensus 418 GH~~~~ 423 (468)
||+--.
T Consensus 154 GHiN~~ 159 (181)
T COG3545 154 GHINAE 159 (181)
T ss_pred cccchh
Confidence 997543
|
|
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=7e-09 Score=120.54 Aligned_cols=96 Identities=23% Similarity=0.318 Sum_probs=84.0
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC-----ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhH
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-----PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGG 253 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-----s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG 253 (468)
+|+++|+||++++...|..+.+.|..++.|++++.||+|.. +++++++++.+.++... +..+++++||||||
T Consensus 1068 ~~~l~~lh~~~g~~~~~~~l~~~l~~~~~v~~~~~~g~~~~~~~~~~l~~la~~~~~~i~~~~---~~~p~~l~G~S~Gg 1144 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQFSVLSRYLDPQWSIYGIQSPRPDGPMQTATSLDEVCEAHLATLLEQQ---PHGPYHLLGYSLGG 1144 (1296)
T ss_pred CCCeEEecCCCCchHHHHHHHHhcCCCCcEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHhhC---CCCCEEEEEechhh
Confidence 57899999999999999999999988999999999999865 68899999888887642 34589999999999
Q ss_pred HHHHHHHHh---CCCCceEEEEeCCCC
Q 012190 254 CLALAVAAR---NPTIDLILILSNPAT 277 (468)
Q Consensus 254 ~ia~~~a~~---~P~~v~~lVli~p~~ 277 (468)
.+|..+|.+ .++.+..++++++..
T Consensus 1145 ~vA~e~A~~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1145 TLAQGIAARLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred HHHHHHHHHHHHcCCceeEEEEecCCC
Confidence 999999986 578899999998743
|
|
| >KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.04 E-value=2.2e-09 Score=106.14 Aligned_cols=125 Identities=14% Similarity=0.098 Sum_probs=97.7
Q ss_pred HhccCccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhH-----h-hh-cCCeEEEEecCCCCCCC----
Q 012190 151 DAAKEIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHH-----K-PL-GKAFEVRCLHIPVYDRT---- 219 (468)
Q Consensus 151 ~~~~~~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~-----~-~L-~~~~~V~~~D~~G~G~S---- 219 (468)
.|...+.+.||-.+.+.+....+ .++|+|++.||+.+++..|.... . .| ..||+|+.-..||.--|
T Consensus 48 ~E~h~V~T~DgYiL~lhRIp~~~---~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~ 124 (403)
T KOG2624|consen 48 VEEHEVTTEDGYILTLHRIPRGK---KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHK 124 (403)
T ss_pred eEEEEEEccCCeEEEEeeecCCC---CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhc
Confidence 45567788999876666554443 35899999999999999887543 2 22 56899999999996544
Q ss_pred -------------ChHHHH-HHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCC---CceEEEEeCCCCC
Q 012190 220 -------------PFEGLV-KFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPT---IDLILILSNPATS 278 (468)
Q Consensus 220 -------------s~~~~~-~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~---~v~~lVli~p~~~ 278 (468)
++++++ -|+-+.|+.+....+.++++.+|||.|+.....+++..|+ +|+.+++++|+..
T Consensus 125 ~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~ 200 (403)
T KOG2624|consen 125 KLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAF 200 (403)
T ss_pred ccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhh
Confidence 366654 4788888887777778899999999999999988888875 7999999999873
|
|
| >COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.02 E-value=3.7e-09 Score=96.17 Aligned_cols=191 Identities=16% Similarity=0.092 Sum_probs=120.3
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCC----------------------------hHHHHHHHH
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP----------------------------FEGLVKFVE 229 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss----------------------------~~~~~~dl~ 229 (468)
.-|.||-.||+++++..|......=..+|.|+.+|-||.|.|+ +.....|+.
T Consensus 82 ~~P~vV~fhGY~g~~g~~~~~l~wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~ 161 (321)
T COG3458 82 KLPAVVQFHGYGGRGGEWHDMLHWAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAV 161 (321)
T ss_pred ccceEEEEeeccCCCCCccccccccccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHH
Confidence 3789999999999999887777666889999999999999761 122333444
Q ss_pred HHHHHHhh--cCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhh
Q 012190 230 ETVRREHA--SSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLS 307 (468)
Q Consensus 230 ~~i~~~~~--~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (468)
.+++.+.. ....++|.+.|.|.||.+++.+|+.. .++++++++-|..+.-...+ +......+..+...+.
T Consensus 162 ~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~-~rik~~~~~~Pfl~df~r~i-------~~~~~~~ydei~~y~k 233 (321)
T COG3458 162 RAVEILASLDEVDEERIGVTGGSQGGGLALAAAALD-PRIKAVVADYPFLSDFPRAI-------ELATEGPYDEIQTYFK 233 (321)
T ss_pred HHHHHHhccCccchhheEEeccccCchhhhhhhhcC-hhhhcccccccccccchhhe-------eecccCcHHHHHHHHH
Confidence 44443332 12467899999999999999888887 47999998877553311111 1100000101111000
Q ss_pred hhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEe
Q 012190 308 YVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLAS 387 (468)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G 387 (468)
.. .+. .++.. ..+...+. ....+++++|+|+..|
T Consensus 234 ~h----------------~~~--e~~v~--------------------------~TL~yfD~--~n~A~RiK~pvL~svg 267 (321)
T COG3458 234 RH----------------DPK--EAEVF--------------------------ETLSYFDI--VNLAARIKVPVLMSVG 267 (321)
T ss_pred hc----------------Cch--HHHHH--------------------------HHHhhhhh--hhHHHhhccceEEeec
Confidence 00 000 01111 11111111 1233789999999999
Q ss_pred CCCCCCCcHHHHHHHHHhCC-CcEEEEeCCCCccccc
Q 012190 388 GKDNMLPSEDEAKRLNNSLQ-NCIVRNFKDNGHTLLL 423 (468)
Q Consensus 388 ~~D~~v~~~~~~~~l~~~l~-~~~~~~i~~aGH~~~~ 423 (468)
-.|+++||. ..-.+++.++ .+++.+++.-+|.-.-
T Consensus 268 L~D~vcpPs-tqFA~yN~l~~~K~i~iy~~~aHe~~p 303 (321)
T COG3458 268 LMDPVCPPS-TQFAAYNALTTSKTIEIYPYFAHEGGP 303 (321)
T ss_pred ccCCCCCCh-hhHHHhhcccCCceEEEeeccccccCc
Confidence 999999999 6878888886 5677888877776543
|
|
| >PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.9e-09 Score=99.04 Aligned_cols=98 Identities=24% Similarity=0.298 Sum_probs=72.2
Q ss_pred EEEeCCCCCc---hhhHHHhHhhh-c-CCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhc-----CCCCcEEEEEeCh
Q 012190 182 LLFLPGIDGL---GLGLILHHKPL-G-KAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHAS-----SPEKPIYLVGDSF 251 (468)
Q Consensus 182 lV~lHG~~~s---~~~~~~~~~~L-~-~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~-----~~~~~i~LvGhS~ 251 (468)
||++||.+.. .......+..+ . .++.|+++|+|=..+.++.+..+|+.+.++.+... ....+|+|+|+|.
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SA 80 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEAPFPAALEDVKAAYRWLLKNADKLGIDPERIVLIGDSA 80 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTSSTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETH
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccccccccccccccccceeeeccccccccccccceEEeeccc
Confidence 6899998644 33445556666 2 68999999999888888888888888888887765 4567999999999
Q ss_pred hHHHHHHHHHhCCC----CceEEEEeCCCCCC
Q 012190 252 GGCLALAVAARNPT----IDLILILSNPATSF 279 (468)
Q Consensus 252 GG~ia~~~a~~~P~----~v~~lVli~p~~~~ 279 (468)
||.+|+.++.+..+ .++++++++|....
T Consensus 81 Gg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 81 GGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp HHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred ccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 99999999975432 48999999996544
|
; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A .... |
| >PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=98.98 E-value=4.7e-09 Score=97.03 Aligned_cols=100 Identities=17% Similarity=0.202 Sum_probs=73.3
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhh---------cCCeEEEEecCCCCCC----CChHHHHHHHHHHHHHHhhcC-----
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPL---------GKAFEVRCLHIPVYDR----TPFEGLVKFVEETVRREHASS----- 239 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L---------~~~~~V~~~D~~G~G~----Ss~~~~~~dl~~~i~~~~~~~----- 239 (468)
++.+|||+||..|+...++.+...+ ...++++++|+..... ..+.+..+.+.+.++.+....
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~~~~~~ 82 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILELYKSNRP 82 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHHHHHHHHHHHHHHHHhhhhccC
Confidence 4678999999999999887776555 1258899999876431 245555555555555554333
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCC---CCceEEEEeCCCC
Q 012190 240 PEKPIYLVGDSFGGCLALAVAARNP---TIDLILILSNPAT 277 (468)
Q Consensus 240 ~~~~i~LvGhS~GG~ia~~~a~~~P---~~v~~lVli~p~~ 277 (468)
+.++|+||||||||.+|-.++...+ +.|+.+|.++.+.
T Consensus 83 ~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh 123 (225)
T PF07819_consen 83 PPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPH 123 (225)
T ss_pred CCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCC
Confidence 6789999999999999987776543 5799999988755
|
This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane |
| >PF10503 Esterase_phd: Esterase PHB depolymerase | Back alignment and domain information |
|---|
Probab=98.98 E-value=5e-08 Score=89.16 Aligned_cols=110 Identities=20% Similarity=0.173 Sum_probs=71.5
Q ss_pred eecCCCCCCCCCCeEEEeCCCCCchhhHHHh--Hhhh--cCCeEEEEecCCCC--CCCC----------hHHHHHHHHHH
Q 012190 168 CPVDCGRPLKGSPTLLFLPGIDGLGLGLILH--HKPL--GKAFEVRCLHIPVY--DRTP----------FEGLVKFVEET 231 (468)
Q Consensus 168 ~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~--~~~L--~~~~~V~~~D~~G~--G~Ss----------~~~~~~dl~~~ 231 (468)
-|.+.+.+..+.|.||++||.+++...+... ...| ..+|-|+.++.... .... -.+-+..|..+
T Consensus 5 lYvP~~~~~~~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~l 84 (220)
T PF10503_consen 5 LYVPPGAPRGPVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAAL 84 (220)
T ss_pred EecCCCCCCCCCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHH
Confidence 4455554333578999999999999987653 3455 34577777764311 0000 01112233344
Q ss_pred HHHHhhc--CCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 232 VRREHAS--SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 232 i~~~~~~--~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
++++... ....+|++.|+|.||+.+..++..+|+.+.++...++..
T Consensus 85 v~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 85 VDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVP 132 (220)
T ss_pred HHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccc
Confidence 4433322 235699999999999999999999999999988876643
|
|
| >PTZ00472 serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.1e-07 Score=97.37 Aligned_cols=103 Identities=20% Similarity=0.157 Sum_probs=75.9
Q ss_pred CCCCeEEEeCCCCCchhhHHHhH------------------hhhcCCeEEEEecCC-CCCCC---------ChHHHHHHH
Q 012190 177 KGSPTLLFLPGIDGLGLGLILHH------------------KPLGKAFEVRCLHIP-VYDRT---------PFEGLVKFV 228 (468)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~~~~~------------------~~L~~~~~V~~~D~~-G~G~S---------s~~~~~~dl 228 (468)
++.|++|+++|.+|+...+..+. -.+.+..+++.+|.| |+|.| +.++.++|+
T Consensus 75 ~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d~ 154 (462)
T PTZ00472 75 PEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVDQPAGVGFSYADKADYDHNESEVSEDM 154 (462)
T ss_pred CCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccccCeEEEeCCCCcCcccCCCCCCCCChHHHHHHH
Confidence 56899999999999887542221 012345789999986 78776 246788888
Q ss_pred HHHHHHHhhcCC---CCcEEEEEeChhHHHHHHHHHhC----------CCCceEEEEeCCCCCC
Q 012190 229 EETVRREHASSP---EKPIYLVGDSFGGCLALAVAARN----------PTIDLILILSNPATSF 279 (468)
Q Consensus 229 ~~~i~~~~~~~~---~~~i~LvGhS~GG~ia~~~a~~~----------P~~v~~lVli~p~~~~ 279 (468)
.++++......+ ..+++|+|||+||.++..+|.+- +-.++|+++-++....
T Consensus 155 ~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~dp 218 (462)
T PTZ00472 155 YNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTDP 218 (462)
T ss_pred HHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccCh
Confidence 888887654444 48999999999999998888652 1247899998887644
|
|
| >COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.1e-07 Score=79.74 Aligned_cols=153 Identities=18% Similarity=0.155 Sum_probs=106.2
Q ss_pred CCeEEEeCCCCCchh--hHHHhHhhh-cCCeEEEEecCCCC-----CCC-------C-hHHHHHHHHHHHHHHhhcCCCC
Q 012190 179 SPTLLFLPGIDGLGL--GLILHHKPL-GKAFEVRCLHIPVY-----DRT-------P-FEGLVKFVEETVRREHASSPEK 242 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~--~~~~~~~~L-~~~~~V~~~D~~G~-----G~S-------s-~~~~~~dl~~~i~~~~~~~~~~ 242 (468)
.-+||+.||.+++.+ .+...+..| ..++.|.-|++|-. |+- + ...+...+.++-.. ....
T Consensus 14 ~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~----l~~g 89 (213)
T COG3571 14 PVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAG----LAEG 89 (213)
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhc----ccCC
Confidence 337899999998877 566677888 67899999987643 211 1 34444444444433 5556
Q ss_pred cEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhc
Q 012190 243 PIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIE 322 (468)
Q Consensus 243 ~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (468)
|.++-|+||||-++..+|......|+++++++=++..+-.+
T Consensus 90 pLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKP--------------------------------------- 130 (213)
T COG3571 90 PLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKP--------------------------------------- 130 (213)
T ss_pred ceeeccccccchHHHHHHHhhcCCcceEEEecCccCCCCCc---------------------------------------
Confidence 89999999999999988887666799999976333211100
Q ss_pred cCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHH
Q 012190 323 NRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRL 402 (468)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l 402 (468)
+ .+. .+.|..+++|+|+.+|+.|.+-..+ +...
T Consensus 131 ---------e-----------------------~~R-------------t~HL~gl~tPtli~qGtrD~fGtr~-~Va~- 163 (213)
T COG3571 131 ---------E-----------------------QLR-------------TEHLTGLKTPTLITQGTRDEFGTRD-EVAG- 163 (213)
T ss_pred ---------c-----------------------cch-------------hhhccCCCCCeEEeecccccccCHH-HHHh-
Confidence 0 000 2467889999999999999998777 3422
Q ss_pred HHhCCCcEEEEeCCCCccc
Q 012190 403 NNSLQNCIVRNFKDNGHTL 421 (468)
Q Consensus 403 ~~~l~~~~~~~i~~aGH~~ 421 (468)
+...+..+++.+.++.|.+
T Consensus 164 y~ls~~iev~wl~~adHDL 182 (213)
T COG3571 164 YALSDPIEVVWLEDADHDL 182 (213)
T ss_pred hhcCCceEEEEeccCcccc
Confidence 2233578999999999986
|
|
| >COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.88 E-value=4.3e-08 Score=95.12 Aligned_cols=237 Identities=16% Similarity=0.114 Sum_probs=135.6
Q ss_pred CCCeEEEeCCCCCchhhHH-----HhHhhh-cCCeEEEEecCCCCCCC----ChHHHH-HHHHHHHHHHhhcCCCCcEEE
Q 012190 178 GSPTLLFLPGIDGLGLGLI-----LHHKPL-GKAFEVRCLHIPVYDRT----PFEGLV-KFVEETVRREHASSPEKPIYL 246 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~-----~~~~~L-~~~~~V~~~D~~G~G~S----s~~~~~-~dl~~~i~~~~~~~~~~~i~L 246 (468)
-+++++++|-+-.....+. .++..| .+++.|+.+++++-+.+ .++|+. +.+.+.++......+.++|.+
T Consensus 106 ~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~aid~v~~itg~~~Inl 185 (445)
T COG3243 106 LKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAAKNLEDYILEGLSEAIDTVKDITGQKDINL 185 (445)
T ss_pred CCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhhccHHHHHHHHHHHHHHHHHHHhCccccce
Confidence 3567888898766655432 345555 78999999999865544 688887 888888888877777789999
Q ss_pred EEeChhHHHHHHHHHhCCCC-ceEEEEeCCCCCCCCCCcCcch---HHHhhCchhHH-------hhHHHHhhhhcCChhh
Q 012190 247 VGDSFGGCLALAVAARNPTI-DLILILSNPATSFGRSQLQPLF---PILKAMPDELH-------CAVPYLLSYVMGDPIK 315 (468)
Q Consensus 247 vGhS~GG~ia~~~a~~~P~~-v~~lVli~p~~~~~~~~~~~~~---~~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 315 (468)
+|||.||.++..+++.++.+ |+.++++.+...+......... ..+..+..... ......+..+..+.+.
T Consensus 186 iGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lpg~~ma~~F~mLrpndli 265 (445)
T COG3243 186 IGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILPGWYMAIVFFLLRPNDLI 265 (445)
T ss_pred eeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhhhhccCCChHHHHHHHHhcCccccc
Confidence 99999999999999998887 9999998776655443211111 11111111000 0011111112111111
Q ss_pred HH--HHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHH---------HhhhcccCCceEEE
Q 012190 316 MA--MVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAY---------ANSRLHAVKAEVLV 384 (468)
Q Consensus 316 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---------~~~~l~~i~~PvLl 384 (468)
+. ...+..+..+.. .+-..... -.-.++.....+.++.+...... ..-.|..|+||++.
T Consensus 266 w~~fV~nyl~ge~pl~-fdllyWn~---------dst~~~~~~~~~~Lrn~y~~N~l~~g~~~v~G~~VdL~~It~pvy~ 335 (445)
T COG3243 266 WNYFVNNYLDGEQPLP-FDLLYWNA---------DSTRLPGAAHSEYLRNFYLENRLIRGGLEVSGTMVDLGDITCPVYN 335 (445)
T ss_pred hHHHHHHhcCCCCCCc-hhHHHhhC---------CCccCchHHHHHHHHHHHHhChhhccceEECCEEechhhcccceEE
Confidence 11 001111111100 00000000 00112222333333221111110 12356789999999
Q ss_pred EEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccC
Q 012190 385 LASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEE 425 (468)
Q Consensus 385 I~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~ 425 (468)
+.|+.|.++|.. ......+.+++-...+.-++||....=.
T Consensus 336 ~a~~~DhI~P~~-Sv~~g~~l~~g~~~f~l~~sGHIa~vVN 375 (445)
T COG3243 336 LAAEEDHIAPWS-SVYLGARLLGGEVTFVLSRSGHIAGVVN 375 (445)
T ss_pred EeecccccCCHH-HHHHHHHhcCCceEEEEecCceEEEEeC
Confidence 999999999999 5888888888743344445899866544
|
|
| >PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.4e-08 Score=93.21 Aligned_cols=156 Identities=16% Similarity=0.159 Sum_probs=85.5
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhh----cC-CeEEEEecCCC-----CCC-----------------------------
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPL----GK-AFEVRCLHIPV-----YDR----------------------------- 218 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L----~~-~~~V~~~D~~G-----~G~----------------------------- 218 (468)
.++-||||||++.++..|......| .+ .++.+.+|-|- -|-
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 3678999999999999988765444 55 78888777431 110
Q ss_pred -CChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhC--------CCCceEEEEeCCCCCCCCCCcCcchH
Q 012190 219 -TPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARN--------PTIDLILILSNPATSFGRSQLQPLFP 289 (468)
Q Consensus 219 -Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~--------P~~v~~lVli~p~~~~~~~~~~~~~~ 289 (468)
..+++..+.+.+.++..+ + =..|+|+|.||.+|..++... ...++-+|++++.......
T Consensus 83 ~~~~~~sl~~l~~~i~~~G---P--fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~------- 150 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENG---P--FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD------- 150 (212)
T ss_dssp G---HHHHHHHHHHHHHH--------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE--------
T ss_pred ccCHHHHHHHHHHHHHhcC---C--eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh-------
Confidence 014455555555555532 1 246999999999998888542 2246778887764321000
Q ss_pred HHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhH
Q 012190 290 ILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASA 369 (468)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 369 (468)
. .+. +
T Consensus 151 ------------~----------------------------~~~------------------~----------------- 155 (212)
T PF03959_consen 151 ------------Y----------------------------QEL------------------Y----------------- 155 (212)
T ss_dssp ------------G----------------------------TTT------------------T-----------------
T ss_pred ------------h----------------------------hhh------------------h-----------------
Confidence 0 000 0
Q ss_pred HHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCC-cEEEEeCCCCccccccCc
Q 012190 370 YANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQN-CIVRNFKDNGHTLLLEEG 426 (468)
Q Consensus 370 ~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~-~~~~~i~~aGH~~~~e~p 426 (468)
.-..+++|+|-|+|++|.+++++ ..+.+.+.+.+ .+++..+ +||.+....+
T Consensus 156 ----~~~~i~iPtlHv~G~~D~~~~~~-~s~~L~~~~~~~~~v~~h~-gGH~vP~~~~ 207 (212)
T PF03959_consen 156 ----DEPKISIPTLHVIGENDPVVPPE-RSEALAEMFDPDARVIEHD-GGHHVPRKKE 207 (212)
T ss_dssp ------TT---EEEEEEETT-SSS-HH-HHHHHHHHHHHHEEEEEES-SSSS----HH
T ss_pred ----ccccCCCCeEEEEeCCCCCcchH-HHHHHHHhccCCcEEEEEC-CCCcCcCChh
Confidence 01567999999999999999998 68999998877 7878787 5999876543
|
It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A. |
| >PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.5e-07 Score=90.19 Aligned_cols=232 Identities=16% Similarity=0.154 Sum_probs=127.2
Q ss_pred CCCeEEEeCCCCCchhhHHHh--Hhhh-cCCeEEEEecCCCCCCC--------C---h-------HHHHHHHHHHHHHHh
Q 012190 178 GSPTLLFLPGIDGLGLGLILH--HKPL-GKAFEVRCLHIPVYDRT--------P---F-------EGLVKFVEETVRREH 236 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~--~~~L-~~~~~V~~~D~~G~G~S--------s---~-------~~~~~dl~~~i~~~~ 236 (468)
.+|.+|.++|.|......+.. +..| .+++..+.+..|-||.- . . ...+.+...++..+.
T Consensus 91 ~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl~ 170 (348)
T PF09752_consen 91 YRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWLE 170 (348)
T ss_pred CCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHHH
Confidence 488999999999977655442 4555 66899999999999843 1 1 223344445555555
Q ss_pred hcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhH
Q 012190 237 ASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKM 316 (468)
Q Consensus 237 ~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
.+ +..++.+.|.||||.+|...|+..|..+..+-++++..... .+ ....+..... |..+...+ .+....
T Consensus 171 ~~-G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~--vF--t~Gvls~~i~-----W~~L~~q~-~~~~~~ 239 (348)
T PF09752_consen 171 RE-GYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASV--VF--TEGVLSNSIN-----WDALEKQF-EDTVYE 239 (348)
T ss_pred hc-CCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCc--ch--hhhhhhcCCC-----HHHHHHHh-cccchh
Confidence 45 66699999999999999999999999877666666544210 00 0001110000 11111110 000000
Q ss_pred HHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcH
Q 012190 317 AMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSE 396 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~ 396 (468)
................ .........+.+......+.......+-....-.-.+.++.+++|.++|..
T Consensus 240 ---~~~~~~~~~~~~~~~~----------~~~~~~~~~Ea~~~m~~~md~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~ 306 (348)
T PF09752_consen 240 ---EEISDIPAQNKSLPLD----------SMEERRRDREALRFMRGVMDSFTHLTNFPVPVDPSAIIFVAAKNDAYVPRH 306 (348)
T ss_pred ---hhhcccccCcccccch----------hhccccchHHHHHHHHHHHHhhccccccCCCCCCCcEEEEEecCceEechh
Confidence 0000000000000000 000000111122111111111111101111222345889999999999998
Q ss_pred HHHHHHHHhCCCcEEEEeCCCCcc-ccccCcHHHHHHHHh
Q 012190 397 DEAKRLNNSLQNCIVRNFKDNGHT-LLLEEGISLLTIIKG 435 (468)
Q Consensus 397 ~~~~~l~~~l~~~~~~~i~~aGH~-~~~e~p~~~~~~I~~ 435 (468)
....+.+..|++++..+++ ||. .++-+.+.+.++|.+
T Consensus 307 -~v~~Lq~~WPGsEvR~l~g-GHVsA~L~~q~~fR~AI~D 344 (348)
T PF09752_consen 307 -GVLSLQEIWPGSEVRYLPG-GHVSAYLLHQEAFRQAIYD 344 (348)
T ss_pred -hcchHHHhCCCCeEEEecC-CcEEEeeechHHHHHHHHH
Confidence 6889999999999999986 997 455677888888874
|
|
| >PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.8e-08 Score=100.24 Aligned_cols=99 Identities=20% Similarity=0.179 Sum_probs=59.7
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC-------------C-----------------------
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT-------------P----------------------- 220 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S-------------s----------------------- 220 (468)
.-|+|||-||++++...|..++..| +.||-|+++|+|..-.. +
T Consensus 99 ~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (379)
T PF03403_consen 99 KFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEEF 178 (379)
T ss_dssp -EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGHH
T ss_pred CCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhHH
Confidence 4789999999999999999999999 88999999999854211 0
Q ss_pred ------hHHHHHHHHHHHHHHhh----------------------cCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEE
Q 012190 221 ------FEGLVKFVEETVRREHA----------------------SSPEKPIYLVGDSFGGCLALAVAARNPTIDLILIL 272 (468)
Q Consensus 221 ------~~~~~~dl~~~i~~~~~----------------------~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVl 272 (468)
++.-+.++..+++.+.. ++...+|.++|||+||+.++..+.+. .++++.|+
T Consensus 179 ~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~ 257 (379)
T PF03403_consen 179 ELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGIL 257 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEEE
Confidence 11123334444433321 01124699999999999999888776 77999999
Q ss_pred eCCCC
Q 012190 273 SNPAT 277 (468)
Q Consensus 273 i~p~~ 277 (468)
++|+.
T Consensus 258 LD~W~ 262 (379)
T PF03403_consen 258 LDPWM 262 (379)
T ss_dssp ES---
T ss_pred eCCcc
Confidence 98853
|
|
| >PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=98.85 E-value=9e-09 Score=78.27 Aligned_cols=56 Identities=11% Similarity=0.128 Sum_probs=50.6
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC--------ChHHHHHHHHHHHH
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVR 233 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S--------s~~~~~~dl~~~i~ 233 (468)
.+.+|+++||++.+...|..+++.| .++|.|+++|+||||+| +++++++|+..+++
T Consensus 15 ~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 15 PKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHhC
Confidence 3679999999999999999999999 77899999999999999 48899999888763
|
Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. |
| >PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH | Back alignment and domain information |
|---|
Probab=98.85 E-value=9.9e-09 Score=94.24 Aligned_cols=49 Identities=20% Similarity=0.453 Sum_probs=31.0
Q ss_pred hcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC------CcEEEEeCCCCcccc
Q 012190 374 RLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ------NCIVRNFKDNGHTLL 422 (468)
Q Consensus 374 ~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~------~~~~~~i~~aGH~~~ 422 (468)
.+.++++|+|+|.|++|.+.|....++.+.+++. +.+++.++++||++.
T Consensus 110 pvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~i~ 164 (213)
T PF08840_consen 110 PVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGHLIE 164 (213)
T ss_dssp -GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S---
T ss_pred cHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCceec
Confidence 4578899999999999999998855656655542 468888999999974
|
Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B. |
| >PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively [] | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.3e-07 Score=90.62 Aligned_cols=104 Identities=15% Similarity=0.075 Sum_probs=75.6
Q ss_pred CCCeEEEeCCCCCchh---hHHHhHh--------hhcCCeEEEEecCCCCCCCC------hHHHHHHHHHHHHHHhhcC-
Q 012190 178 GSPTLLFLPGIDGLGL---GLILHHK--------PLGKAFEVRCLHIPVYDRTP------FEGLVKFVEETVRREHASS- 239 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~---~~~~~~~--------~L~~~~~V~~~D~~G~G~Ss------~~~~~~dl~~~i~~~~~~~- 239 (468)
.-|+||..|+++.... ....... ...++|.|+..|.||.|.|+ ...-++|..++|+.+..+.
T Consensus 19 ~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~~~~e~~D~~d~I~W~~~Qpw 98 (272)
T PF02129_consen 19 PFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPMSPNEAQDGYDTIEWIAAQPW 98 (272)
T ss_dssp SEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TTSHHHHHHHHHHHHHHHHCTT
T ss_pred cccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccCChhHHHHHHHHHHHHHhCCC
Confidence 4789999999997541 1111111 33789999999999999993 5567778888887776541
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCC
Q 012190 240 PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGR 281 (468)
Q Consensus 240 ~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~ 281 (468)
.+.+|.++|.|++|..++.+|+..|..+++++...+......
T Consensus 99 s~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 99 SNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp EEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCC
T ss_pred CCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccc
Confidence 245899999999999999999989999999999887665544
|
It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A .... |
| >COG0657 Aes Esterase/lipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.78 E-value=2.4e-07 Score=90.54 Aligned_cols=105 Identities=22% Similarity=0.197 Sum_probs=76.7
Q ss_pred CCCCeEEEeCCCCCchh---hHHHhHhhh--cCCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhc-----CCCCcEEE
Q 012190 177 KGSPTLLFLPGIDGLGL---GLILHHKPL--GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHAS-----SPEKPIYL 246 (468)
Q Consensus 177 ~~~p~lV~lHG~~~s~~---~~~~~~~~L--~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~-----~~~~~i~L 246 (468)
...|+||++||.+-... .....+..+ ..++.|+.+|+|-.-+-.+....+|+.+.++.+... ...++|.+
T Consensus 77 ~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v 156 (312)
T COG0657 77 ATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHPFPAALEDAYAAYRWLRANAAELGIDPSRIAV 156 (312)
T ss_pred CCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCCCCchHHHHHHHHHHHHhhhHhhCCCccceEE
Confidence 35899999999854433 343444444 678999999999877777777777666666655533 23578999
Q ss_pred EEeChhHHHHHHHHHhCCC----CceEEEEeCCCCCCCC
Q 012190 247 VGDSFGGCLALAVAARNPT----IDLILILSNPATSFGR 281 (468)
Q Consensus 247 vGhS~GG~ia~~~a~~~P~----~v~~lVli~p~~~~~~ 281 (468)
+|+|.||.+++.++..-.+ ...+.+++.|......
T Consensus 157 ~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 157 AGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS 195 (312)
T ss_pred EecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc
Confidence 9999999999988876443 4678999998875543
|
|
| >KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.6e-08 Score=86.88 Aligned_cols=179 Identities=18% Similarity=0.175 Sum_probs=110.1
Q ss_pred CCCeEEEeCCC----CCchhhHHHhHhhhcCCeEEEEecCCCCCCC-ChHHHHHHHHHHHHHHhhcCCC-CcEEEEEeCh
Q 012190 178 GSPTLLFLPGI----DGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-PFEGLVKFVEETVRREHASSPE-KPIYLVGDSF 251 (468)
Q Consensus 178 ~~p~lV~lHG~----~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-s~~~~~~dl~~~i~~~~~~~~~-~~i~LvGhS~ 251 (468)
..+.+||+||. +.-..........+..+|+|..+++--+-+- +++....++...++......++ +.+.+-|||.
T Consensus 66 ~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~l~~q~htL~qt~~~~~~gv~filk~~~n~k~l~~gGHSa 145 (270)
T KOG4627|consen 66 QAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYNLCPQVHTLEQTMTQFTHGVNFILKYTENTKVLTFGGHSA 145 (270)
T ss_pred CccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccCcCcccccHHHHHHHHHHHHHHHHHhcccceeEEEcccch
Confidence 47799999996 3333345555666788999998875433332 3444444444444333333443 4566778999
Q ss_pred hHHHHHHHHHh-CCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHH
Q 012190 252 GGCLALAVAAR-NPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIK 330 (468)
Q Consensus 252 GG~ia~~~a~~-~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (468)
|+.+|+.+..| +..+|.|+++.++...... +. +...++. .+++.++
T Consensus 146 GAHLa~qav~R~r~prI~gl~l~~GvY~l~E---------L~--------------~te~g~d---------lgLt~~~- 192 (270)
T KOG4627|consen 146 GAHLAAQAVMRQRSPRIWGLILLCGVYDLRE---------LS--------------NTESGND---------LGLTERN- 192 (270)
T ss_pred HHHHHHHHHHHhcCchHHHHHHHhhHhhHHH---------Hh--------------CCccccc---------cCcccch-
Confidence 99999887766 4568999998876442100 00 0000000 0000000
Q ss_pred hhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcE
Q 012190 331 LEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCI 410 (468)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~ 410 (468)
.+ ...... ..+..++.|+|++.|++|.---.+ ..+.+...+.+++
T Consensus 193 ae--------------------~~Scdl--------------~~~~~v~~~ilVv~~~~espklie-Qnrdf~~q~~~a~ 237 (270)
T KOG4627|consen 193 AE--------------------SVSCDL--------------WEYTDVTVWILVVAAEHESPKLIE-QNRDFADQLRKAS 237 (270)
T ss_pred hh--------------------hcCccH--------------HHhcCceeeeeEeeecccCcHHHH-hhhhHHHHhhhcc
Confidence 00 000111 244778999999999999766666 6788888888999
Q ss_pred EEEeCCCCcccccc
Q 012190 411 VRNFKDNGHTLLLE 424 (468)
Q Consensus 411 ~~~i~~aGH~~~~e 424 (468)
+..|++.+|+-.++
T Consensus 238 ~~~f~n~~hy~I~~ 251 (270)
T KOG4627|consen 238 FTLFKNYDHYDIIE 251 (270)
T ss_pred eeecCCcchhhHHH
Confidence 99999999997665
|
|
| >PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=98.76 E-value=2.6e-07 Score=84.05 Aligned_cols=114 Identities=19% Similarity=0.140 Sum_probs=80.0
Q ss_pred CceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhh----
Q 012190 163 PPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHA---- 237 (468)
Q Consensus 163 ~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~---- 237 (468)
++..+.+.+.|. -|.|+|+||+.-....|..++.++ +.+|-|+++++-.--..+-.+-+++..++++.+..
T Consensus 34 pLlI~tP~~~G~----yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~~p~~~~Ei~~aa~V~~WL~~gL~~ 109 (307)
T PF07224_consen 34 PLLIVTPSEAGT----YPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLFPPDGQDEIKSAASVINWLPEGLQH 109 (307)
T ss_pred CeEEecCCcCCC----ccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcccCCCchHHHHHHHHHHHHHHhhhhh
Confidence 345566667766 899999999999999999999999 77899999997543222222222222222222221
Q ss_pred cC------CCCcEEEEEeChhHHHHHHHHHhCC--CCceEEEEeCCCCCCC
Q 012190 238 SS------PEKPIYLVGDSFGGCLALAVAARNP--TIDLILILSNPATSFG 280 (468)
Q Consensus 238 ~~------~~~~i~LvGhS~GG~ia~~~a~~~P--~~v~~lVli~p~~~~~ 280 (468)
.+ ...++.|+|||.||-.|..+|..+. -.+.+||-++|..+..
T Consensus 110 ~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~~ 160 (307)
T PF07224_consen 110 VLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGTS 160 (307)
T ss_pred hCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCCC
Confidence 11 2468999999999999999998773 3578899999977543
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.75 E-value=6e-08 Score=90.46 Aligned_cols=96 Identities=27% Similarity=0.364 Sum_probs=82.0
Q ss_pred CeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC-----ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHH
Q 012190 180 PTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-----PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGC 254 (468)
Q Consensus 180 p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-----s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ 254 (468)
|+|+++|+.+|....|.++...|.....|+.++.||.+.- +++++++...+.|... .+..|++|+|||+||.
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~~~v~~l~a~g~~~~~~~~~~l~~~a~~yv~~Ir~~---QP~GPy~L~G~S~GG~ 77 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPLLPVYGLQAPGYGAGEQPFASLDDMAAAYVAAIRRV---QPEGPYVLLGWSLGGA 77 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccCceeeccccCcccccccccCCHHHHHHHHHHHHHHh---CCCCCEEEEeeccccH
Confidence 5799999999999999999999988899999999999732 5777777777776664 4566999999999999
Q ss_pred HHHHHHHh---CCCCceEEEEeCCCCC
Q 012190 255 LALAVAAR---NPTIDLILILSNPATS 278 (468)
Q Consensus 255 ia~~~a~~---~P~~v~~lVli~p~~~ 278 (468)
+|..+|.+ ..+.|.-++++++...
T Consensus 78 vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 78 VAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 99999976 3467899999998775
|
|
| >KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.73 E-value=7.7e-08 Score=85.50 Aligned_cols=150 Identities=17% Similarity=0.212 Sum_probs=109.2
Q ss_pred CeEEEeCCCCCchhh-HHHhHhhh-cCCeEEEEecC-CCCCCC---------------ChHHHHHHHHHHHHHHhhcCCC
Q 012190 180 PTLLFLPGIDGLGLG-LILHHKPL-GKAFEVRCLHI-PVYDRT---------------PFEGLVKFVEETVRREHASSPE 241 (468)
Q Consensus 180 p~lV~lHG~~~s~~~-~~~~~~~L-~~~~~V~~~D~-~G~G~S---------------s~~~~~~dl~~~i~~~~~~~~~ 241 (468)
..||++--..|.... -+..+..+ ..+|.|+++|+ +|--.+ +.+-.-+++..+++.+......
T Consensus 40 ~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~~ 119 (242)
T KOG3043|consen 40 KVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGDS 119 (242)
T ss_pred eEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCCc
Confidence 456666655555443 66677777 56899999997 553222 2344566777777777766668
Q ss_pred CcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhh
Q 012190 242 KPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNI 321 (468)
Q Consensus 242 ~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (468)
++|-++|.+|||.++..+.+..| .+.+.+..-|...-
T Consensus 120 kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~d------------------------------------------ 156 (242)
T KOG3043|consen 120 KKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFVD------------------------------------------ 156 (242)
T ss_pred ceeeEEEEeecceEEEEeeccch-hheeeeEecCCcCC------------------------------------------
Confidence 89999999999999998888877 67777776552200
Q ss_pred ccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHH
Q 012190 322 ENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKR 401 (468)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~ 401 (468)
......+++|+|++.|+.|.++|+. ....
T Consensus 157 --------------------------------------------------~~D~~~vk~Pilfl~ae~D~~~p~~-~v~~ 185 (242)
T KOG3043|consen 157 --------------------------------------------------SADIANVKAPILFLFAELDEDVPPK-DVKA 185 (242)
T ss_pred --------------------------------------------------hhHHhcCCCCEEEEeecccccCCHH-HHHH
Confidence 0223678899999999999999999 6777
Q ss_pred HHHhCC-----CcEEEEeCCCCccccc
Q 012190 402 LNNSLQ-----NCIVRNFKDNGHTLLL 423 (468)
Q Consensus 402 l~~~l~-----~~~~~~i~~aGH~~~~ 423 (468)
+.+.+. +.++.++++.+|...-
T Consensus 186 ~ee~lk~~~~~~~~v~~f~g~~HGf~~ 212 (242)
T KOG3043|consen 186 WEEKLKENPAVGSQVKTFSGVGHGFVA 212 (242)
T ss_pred HHHHHhcCcccceeEEEcCCccchhhh
Confidence 776664 3479999999998763
|
|
| >PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.7e-07 Score=87.62 Aligned_cols=99 Identities=16% Similarity=0.117 Sum_probs=70.4
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhhc-C-C--eEEEE--ecCCCC----C------------------C-CChHHHHHHHH
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPLG-K-A--FEVRC--LHIPVY----D------------------R-TPFEGLVKFVE 229 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~-~-~--~~V~~--~D~~G~----G------------------~-Ss~~~~~~dl~ 229 (468)
..|.||+||++++...+..++..+. + + -.++. ++--|+ | + .+....++.+.
T Consensus 11 ~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl~ 90 (255)
T PF06028_consen 11 TTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWLK 90 (255)
T ss_dssp -EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHHH
T ss_pred CCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHHH
Confidence 4579999999999999999998885 3 2 22322 222221 1 1 13678899999
Q ss_pred HHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCC-----CceEEEEeCCCC
Q 012190 230 ETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPT-----IDLILILSNPAT 277 (468)
Q Consensus 230 ~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~-----~v~~lVli~p~~ 277 (468)
.++..+.....-+++.+|||||||..++.++..+.. .+.++|.+++++
T Consensus 91 ~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pf 143 (255)
T PF06028_consen 91 KVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPF 143 (255)
T ss_dssp HHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--T
T ss_pred HHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEecccc
Confidence 999999999889999999999999999999988532 588999998765
|
; PDB: 3LP5_A 3FLE_A 3DS8_A. |
| >KOG2112 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.71 E-value=2.6e-07 Score=81.68 Aligned_cols=168 Identities=21% Similarity=0.201 Sum_probs=114.7
Q ss_pred CeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC-------------------------ChHHHHHHHHHHHH
Q 012190 180 PTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT-------------------------PFEGLVKFVEETVR 233 (468)
Q Consensus 180 p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S-------------------------s~~~~~~dl~~~i~ 233 (468)
.+||++||.+.++..|..+++.| -++..-+|+..|-.--+ ++...++.+..+++
T Consensus 4 atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li~ 83 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLID 83 (206)
T ss_pred EEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHHH
Confidence 47999999999999999888888 45566677654422111 35566777777777
Q ss_pred HHhhcC-CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCC
Q 012190 234 REHASS-PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGD 312 (468)
Q Consensus 234 ~~~~~~-~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (468)
++-... +..+|.+-|.||||++|+..+..+|..+.+.+...+.......
T Consensus 84 ~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~------------------------------ 133 (206)
T KOG2112|consen 84 NEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASI------------------------------ 133 (206)
T ss_pred HHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchh------------------------------
Confidence 765432 3456899999999999999999998888777775542211000
Q ss_pred hhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCC
Q 012190 313 PIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNM 392 (468)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~ 392 (468)
.+ +.-. .. .+ ..|++..||+.|++
T Consensus 134 --------------------~~------------------~~~~----------------~~-~~-~~~i~~~Hg~~d~~ 157 (206)
T KOG2112|consen 134 --------------------GL------------------PGWL----------------PG-VN-YTPILLCHGTADPL 157 (206)
T ss_pred --------------------hc------------------cCCc----------------cc-cC-cchhheecccCCce
Confidence 00 0000 00 11 67999999999999
Q ss_pred CCcHHHHHHHHHhC----CCcEEEEeCCCCccccccCcHHHHHHHH
Q 012190 393 LPSEDEAKRLNNSL----QNCIVRNFKDNGHTLLLEEGISLLTIIK 434 (468)
Q Consensus 393 v~~~~~~~~l~~~l----~~~~~~~i~~aGH~~~~e~p~~~~~~I~ 434 (468)
+|.. ..+.-.+.+ ..+++..+++.+|...-+.=+++...|.
T Consensus 158 vp~~-~g~~s~~~l~~~~~~~~f~~y~g~~h~~~~~e~~~~~~~~~ 202 (206)
T KOG2112|consen 158 VPFR-FGEKSAQFLKSLGVRVTFKPYPGLGHSTSPQELDDLKSWIK 202 (206)
T ss_pred eehH-HHHHHHHHHHHcCCceeeeecCCccccccHHHHHHHHHHHH
Confidence 9987 454444443 3578889999999987666565555554
|
|
| >KOG3975 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.69 E-value=2.2e-06 Score=77.30 Aligned_cols=236 Identities=13% Similarity=0.130 Sum_probs=132.0
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhh----cCCeEEEEecCCCCCCC----------------ChHHHHHHHHHHHHHHhh
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPL----GKAFEVRCLHIPVYDRT----------------PFEGLVKFVEETVRREHA 237 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L----~~~~~V~~~D~~G~G~S----------------s~~~~~~dl~~~i~~~~~ 237 (468)
+++.+++++|.+|....|.+++.+| .+.+.++.+...||..- ++++.++--.++++....
T Consensus 28 ~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~~P 107 (301)
T KOG3975|consen 28 DKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEYVP 107 (301)
T ss_pred CceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHhCC
Confidence 5889999999999999998888777 33466898888887532 467788877788877543
Q ss_pred cCCCCcEEEEEeChhHHHHHHHHHhCC--CCceEEEEeCCCCCC-CCCC-cCcchHHHhhCchh-------HHhhHHHHh
Q 012190 238 SSPEKPIYLVGDSFGGCLALAVAARNP--TIDLILILSNPATSF-GRSQ-LQPLFPILKAMPDE-------LHCAVPYLL 306 (468)
Q Consensus 238 ~~~~~~i~LvGhS~GG~ia~~~a~~~P--~~v~~lVli~p~~~~-~~~~-~~~~~~~~~~~~~~-------~~~~~~~~~ 306 (468)
+ +.+++++|||-|+.+.+.+..... -.|++++++=|...- ..++ ...+...+..++-. +....|.+.
T Consensus 108 k--~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt~yi~~~~lp~~i 185 (301)
T KOG3975|consen 108 K--DRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLTSYIYWILLPGFI 185 (301)
T ss_pred C--CCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhheeeeeeeecChHHH
Confidence 3 679999999999999999887432 257788887765411 1111 01111111111100 000111111
Q ss_pred hhhcCChhhHHHHhhccCCChhHHh-hhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEE
Q 012190 307 SYVMGDPIKMAMVNIENRLPPRIKL-EQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVL 385 (468)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI 385 (468)
+.+.-.- .......+++.. ..+.-.- +..-.-...+..+.+. .....+ .+-+.+-.+-+-+.
T Consensus 186 r~~Li~~------~l~~~n~p~e~l~tal~l~h----~~v~rn~v~la~qEm~----eV~~~d---~e~~een~d~l~Fy 248 (301)
T KOG3975|consen 186 RFILIKF------MLCGSNGPQEFLSTALFLTH----PQVVRNSVGLAAQEME----EVTTRD---IEYCEENLDSLWFY 248 (301)
T ss_pred HHHHHHH------hcccCCCcHHHHhhHHHhhc----HHHHHHHhhhchHHHH----HHHHhH---HHHHHhcCcEEEEE
Confidence 1110000 000000000000 0000000 0000000000000000 000111 12234445678899
Q ss_pred EeCCCCCCCcHHHHHHHHHhCCCc--EEEEeCCCCccccccCcHHHHHHHH
Q 012190 386 ASGKDNMLPSEDEAKRLNNSLQNC--IVRNFKDNGHTLLLEEGISLLTIIK 434 (468)
Q Consensus 386 ~G~~D~~v~~~~~~~~l~~~l~~~--~~~~i~~aGH~~~~e~p~~~~~~I~ 434 (468)
+|..|.++|.+ ....+.+.+|.- ++-+ ++..|.....+.+..+..+.
T Consensus 249 ygt~DgW~p~~-~~d~~kdd~~eed~~Lde-dki~HAFV~~~~q~ma~~v~ 297 (301)
T KOG3975|consen 249 YGTNDGWVPSH-YYDYYKDDVPEEDLKLDE-DKIPHAFVVKHAQYMANAVF 297 (301)
T ss_pred ccCCCCCcchH-HHHHHhhhcchhceeecc-ccCCcceeecccHHHHHHHH
Confidence 99999999999 799999999854 4444 77999999999999988887
|
|
| >COG4188 Predicted dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.2e-07 Score=91.09 Aligned_cols=199 Identities=19% Similarity=0.200 Sum_probs=119.7
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCC--CCC-------------ChHHHHHHHHHHHHHHhhc---
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVY--DRT-------------PFEGLVKFVEETVRREHAS--- 238 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~--G~S-------------s~~~~~~dl~~~i~~~~~~--- 238 (468)
.-|.||+-||.+++...|..+.+.| +.+|-|.++|.||- |+. .+-+...|+..+++.+...
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~s 149 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTAS 149 (365)
T ss_pred cCCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcC
Confidence 4789999999999999999999999 77899999999983 222 1224444555555444332
Q ss_pred ------CCCCcEEEEEeChhHHHHHHHHHhCCCCceE--------EEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHH
Q 012190 239 ------SPEKPIYLVGDSFGGCLALAVAARNPTIDLI--------LILSNPATSFGRSQLQPLFPILKAMPDELHCAVPY 304 (468)
Q Consensus 239 ------~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~--------lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (468)
....+|.++|||+||..++..+.-..+.... .++..+..... ..+...... . .+
T Consensus 150 P~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~~~~~~~~~--------~~l~q~~av-~--~~- 217 (365)
T COG4188 150 PALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRICLDPPGLNG--------RLLNQCAAV-W--LP- 217 (365)
T ss_pred cccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcccCCCCcCh--------hhhcccccc-c--cc-
Confidence 3456899999999999999888654332110 11111111000 000000000 0 00
Q ss_pred HhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEE
Q 012190 305 LLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLV 384 (468)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLl 384 (468)
.......++ .. .......+...... -...+.+++.|+++
T Consensus 218 ~~~~~~rDp--------------------ri----------ravvA~~p~~~~~F-----------g~tgl~~v~~P~~~ 256 (365)
T COG4188 218 RQAYDLRDP--------------------RI----------RAVVAINPALGMIF-----------GTTGLVKVTDPVLL 256 (365)
T ss_pred hhhhccccc--------------------cc----------eeeeeccCCccccc-----------ccccceeeecceee
Confidence 000000000 00 00000001100000 02456889999999
Q ss_pred EEeCCCCCCCcHHHHHHHHHhCCCc--EEEEeCCCCccccccCcHHH
Q 012190 385 LASGKDNMLPSEDEAKRLNNSLQNC--IVRNFKDNGHTLLLEEGISL 429 (468)
Q Consensus 385 I~G~~D~~v~~~~~~~~l~~~l~~~--~~~~i~~aGH~~~~e~p~~~ 429 (468)
+.|..|...|+..+.......+++. -+..++++.|+-++|...+.
T Consensus 257 ~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~~ 303 (365)
T COG4188 257 AAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCKEG 303 (365)
T ss_pred ecccccccCCcccccccccccCCcchhheeecCCCccccccccCccc
Confidence 9999999888876677778888866 67889999999999988875
|
|
| >KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=98.66 E-value=2e-06 Score=83.54 Aligned_cols=104 Identities=18% Similarity=0.138 Sum_probs=76.3
Q ss_pred CCCCeEEEeCCCCCc-----hhhHHHhHhhh--cCCeEEEEecCCCCCCCC----hHHHHHHHHHHHHH--HhhcCCCCc
Q 012190 177 KGSPTLLFLPGIDGL-----GLGLILHHKPL--GKAFEVRCLHIPVYDRTP----FEGLVKFVEETVRR--EHASSPEKP 243 (468)
Q Consensus 177 ~~~p~lV~lHG~~~s-----~~~~~~~~~~L--~~~~~V~~~D~~G~G~Ss----~~~~~~dl~~~i~~--~~~~~~~~~ 243 (468)
...|.|||+||.|.. ...|..+...+ ..+.-|+.+|+|=.-+.. ++|..+.+..+.++ +......++
T Consensus 88 ~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~r 167 (336)
T KOG1515|consen 88 TKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFPAAYDDGWAALKWVLKNSWLKLGADPSR 167 (336)
T ss_pred cCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCCccchHHHHHHHHHHHhHHHHhCCCccc
Confidence 468999999998543 33677777777 346888889998766654 56666666666553 222234567
Q ss_pred EEEEEeChhHHHHHHHHHhC------CCCceEEEEeCCCCCCC
Q 012190 244 IYLVGDSFGGCLALAVAARN------PTIDLILILSNPATSFG 280 (468)
Q Consensus 244 i~LvGhS~GG~ia~~~a~~~------P~~v~~lVli~p~~~~~ 280 (468)
|+|+|-|.||.+|..+|.+. +.+++|.|++.|.+...
T Consensus 168 v~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~ 210 (336)
T KOG1515|consen 168 VFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGT 210 (336)
T ss_pred EEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCC
Confidence 99999999999999888662 46799999999987543
|
|
| >PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=6.4e-07 Score=97.00 Aligned_cols=80 Identities=14% Similarity=0.051 Sum_probs=63.4
Q ss_pred Hhhh-cCCeEEEEecCCCCCCCC-----h-HHHHHHHHHHHHHHhhc----------------CCCCcEEEEEeChhHHH
Q 012190 199 HKPL-GKAFEVRCLHIPVYDRTP-----F-EGLVKFVEETVRREHAS----------------SPEKPIYLVGDSFGGCL 255 (468)
Q Consensus 199 ~~~L-~~~~~V~~~D~~G~G~Ss-----~-~~~~~dl~~~i~~~~~~----------------~~~~~i~LvGhS~GG~i 255 (468)
...+ .+||.|+..|.||+|.|+ . .+-.+|..++|+.+..+ -.+.+|.++|.|+||.+
T Consensus 272 ~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~ 351 (767)
T PRK05371 272 NDYFLPRGFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTL 351 (767)
T ss_pred HHHHHhCCeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHH
Confidence 3455 779999999999999983 2 45566777777776522 12569999999999999
Q ss_pred HHHHHHhCCCCceEEEEeCCCCC
Q 012190 256 ALAVAARNPTIDLILILSNPATS 278 (468)
Q Consensus 256 a~~~a~~~P~~v~~lVli~p~~~ 278 (468)
++.+|+..|+.++++|..++...
T Consensus 352 ~~~aAa~~pp~LkAIVp~a~is~ 374 (767)
T PRK05371 352 PNAVATTGVEGLETIIPEAAISS 374 (767)
T ss_pred HHHHHhhCCCcceEEEeeCCCCc
Confidence 99999999999999999877543
|
|
| >KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.65 E-value=8.2e-07 Score=79.05 Aligned_cols=55 Identities=20% Similarity=0.332 Sum_probs=46.5
Q ss_pred ccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHH
Q 012190 376 HAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIK 434 (468)
Q Consensus 376 ~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~ 434 (468)
..+++|.|-|.|+.|.+++.. .++.+++.+++..+..-+ +||++.-.+ ...+.|.
T Consensus 160 ~~i~~PSLHi~G~~D~iv~~~-~s~~L~~~~~~a~vl~Hp-ggH~VP~~~--~~~~~i~ 214 (230)
T KOG2551|consen 160 RPLSTPSLHIFGETDTIVPSE-RSEQLAESFKDATVLEHP-GGHIVPNKA--KYKEKIA 214 (230)
T ss_pred cCCCCCeeEEecccceeecch-HHHHHHHhcCCCeEEecC-CCccCCCch--HHHHHHH
Confidence 678999999999999999999 799999999999777777 599998655 4445555
|
|
| >PRK04940 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=2.2e-06 Score=75.14 Aligned_cols=90 Identities=13% Similarity=0.111 Sum_probs=56.1
Q ss_pred EEEeCCCCCchhh--HHHh-HhhhcCCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHH
Q 012190 182 LLFLPGIDGLGLG--LILH-HKPLGKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALA 258 (468)
Q Consensus 182 lV~lHG~~~s~~~--~~~~-~~~L~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~ 258 (468)
||++|||.+|+.+ .+.. .+.+....+++ +++ .- ...+..+.+.+.+..+......+++.|||+|+||..|..
T Consensus 2 IlYlHGF~SS~~S~~~Ka~~l~~~~p~~~~~--~l~--~~-~P~~a~~~l~~~i~~~~~~~~~~~~~liGSSLGGyyA~~ 76 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVLQLQFIDPDVRLI--SYS--TL-HPKHDMQHLLKEVDKMLQLSDDERPLICGVGLGGYWAER 76 (180)
T ss_pred EEEeCCCCCCCCccHHHHHhheeeCCCCeEE--ECC--CC-CHHHHHHHHHHHHHHhhhccCCCCcEEEEeChHHHHHHH
Confidence 7999999999887 5332 22333334444 443 11 223333445555543221111247899999999999999
Q ss_pred HHHhCCCCceEEEEeCCCCCC
Q 012190 259 VAARNPTIDLILILSNPATSF 279 (468)
Q Consensus 259 ~a~~~P~~v~~lVli~p~~~~ 279 (468)
+|.++. + ..||+||+..+
T Consensus 77 La~~~g--~-~aVLiNPAv~P 94 (180)
T PRK04940 77 IGFLCG--I-RQVIFNPNLFP 94 (180)
T ss_pred HHHHHC--C-CEEEECCCCCh
Confidence 999983 3 68899997643
|
|
| >PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins | Back alignment and domain information |
|---|
Probab=98.64 E-value=5.4e-07 Score=79.13 Aligned_cols=97 Identities=21% Similarity=0.160 Sum_probs=81.4
Q ss_pred eEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCC--CCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHH
Q 012190 181 TLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYD--RTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLAL 257 (468)
Q Consensus 181 ~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G--~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~ 257 (468)
.+||+-|=+|-...-..++..| .+|+.|+.+|-+-|= +-+.++.+.|+..++++...+...++++|+|+|+|+-+.-
T Consensus 4 ~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYSFGADvlP 83 (192)
T PF06057_consen 4 LAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSERTPEQTAADLARIIRHYRARWGRKRVVLIGYSFGADVLP 83 (192)
T ss_pred EEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhhCCHHHHHHHHHHHHHHHHHHhCCceEEEEeecCCchhHH
Confidence 5788888888776666788899 778999999976543 3378999999999999998888889999999999999988
Q ss_pred HHHHhCC----CCceEEEEeCCCC
Q 012190 258 AVAARNP----TIDLILILSNPAT 277 (468)
Q Consensus 258 ~~a~~~P----~~v~~lVli~p~~ 277 (468)
....+.| ++|..++|++|..
T Consensus 84 ~~~nrLp~~~r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 84 FIYNRLPAALRARVAQVVLLSPST 107 (192)
T ss_pred HHHhhCCHHHHhheeEEEEeccCC
Confidence 8887776 5789999998855
|
VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium []. |
| >KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.62 E-value=7.2e-07 Score=96.33 Aligned_cols=189 Identities=16% Similarity=0.126 Sum_probs=120.0
Q ss_pred CCCCeEEEeCCCCCchh-------hHHHhHhhhcCCeEEEEecCCCCCCC---------------ChHHHHHHHHHHHHH
Q 012190 177 KGSPTLLFLPGIDGLGL-------GLILHHKPLGKAFEVRCLHIPVYDRT---------------PFEGLVKFVEETVRR 234 (468)
Q Consensus 177 ~~~p~lV~lHG~~~s~~-------~~~~~~~~L~~~~~V~~~D~~G~G~S---------------s~~~~~~dl~~~i~~ 234 (468)
+.-|.+|.+||.+++.. .|... -.-..++-|+.+|.||-|.. +.+|....+..+++.
T Consensus 524 ~kyPllv~~yGGP~sq~v~~~~~~~~~~~-~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~ 602 (755)
T KOG2100|consen 524 KKYPLLVVVYGGPGSQSVTSKFSVDWNEV-VVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKL 602 (755)
T ss_pred CCCCEEEEecCCCCcceeeeeEEecHHHH-hhccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhc
Confidence 35688899999997443 23322 11156899999999998754 356666666666665
Q ss_pred HhhcCCCCcEEEEEeChhHHHHHHHHHhCCCC-ceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCCh
Q 012190 235 EHASSPEKPIYLVGDSFGGCLALAVAARNPTI-DLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDP 313 (468)
Q Consensus 235 ~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~-v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (468)
.. ...+++.++|+|.||.+++.++...|+. ++..+.++|.+.+....-....+. ++.+
T Consensus 603 ~~--iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~~yds~~tery-------------------mg~p 661 (755)
T KOG2100|consen 603 PF--IDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWLYYDSTYTERY-------------------MGLP 661 (755)
T ss_pred cc--ccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeeeeecccccHhh-------------------cCCC
Confidence 53 3467999999999999999999999854 555599999775421110000000 0000
Q ss_pred hhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceE-EEEEeCCCCC
Q 012190 314 IKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEV-LVLASGKDNM 392 (468)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~Pv-LlI~G~~D~~ 392 (468)
.+..... .. ......+..++.|. |+|||+.|..
T Consensus 662 ----------------------------------------~~~~~~y----~e--~~~~~~~~~~~~~~~LliHGt~Ddn 695 (755)
T KOG2100|consen 662 ----------------------------------------SENDKGY----EE--SSVSSPANNIKTPKLLLIHGTEDDN 695 (755)
T ss_pred ----------------------------------------ccccchh----hh--ccccchhhhhccCCEEEEEcCCcCC
Confidence 0000000 00 00012335556665 9999999999
Q ss_pred CCcHHHHHHHHHhCC----CcEEEEeCCCCccccccCc-HHHHHHHH
Q 012190 393 LPSEDEAKRLNNSLQ----NCIVRNFKDNGHTLLLEEG-ISLLTIIK 434 (468)
Q Consensus 393 v~~~~~~~~l~~~l~----~~~~~~i~~aGH~~~~e~p-~~~~~~I~ 434 (468)
+..+ +...+.+.+. ..++.++|+..|.+-.-.. ..+...+.
T Consensus 696 Vh~q-~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~ 741 (755)
T KOG2100|consen 696 VHFQ-QSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLD 741 (755)
T ss_pred cCHH-HHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHH
Confidence 9988 7888887664 4789999999999876443 44444444
|
|
| >smart00824 PKS_TE Thioesterase | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.8e-06 Score=78.46 Aligned_cols=91 Identities=27% Similarity=0.306 Sum_probs=69.7
Q ss_pred EeCCCC--CchhhHHHhHhhhcCCeEEEEecCCCCCCC-----ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHH
Q 012190 184 FLPGID--GLGLGLILHHKPLGKAFEVRCLHIPVYDRT-----PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLA 256 (468)
Q Consensus 184 ~lHG~~--~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-----s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia 256 (468)
++|+.+ ++...|..+...|...+.|+++|.+|++.+ +++++++.....+.. ..+..+++++|||+||.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~l~g~s~Gg~~a 78 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRGRRDVSALPLPGFGPGEPLPASADALVEAQAEAVLR---AAGGRPFVLVGHSSGGLLA 78 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCCCccEEEecCCCCCCCCCCCCCHHHHHHHHHHHHHH---hcCCCCeEEEEECHHHHHH
Confidence 455544 677789999999988899999999999865 356666655544443 2346689999999999999
Q ss_pred HHHHHh---CCCCceEEEEeCCCC
Q 012190 257 LAVAAR---NPTIDLILILSNPAT 277 (468)
Q Consensus 257 ~~~a~~---~P~~v~~lVli~p~~ 277 (468)
..++.+ .++.+.+++++++..
T Consensus 79 ~~~a~~l~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 79 HAVAARLEARGIPPAAVVLLDTYP 102 (212)
T ss_pred HHHHHHHHhCCCCCcEEEEEccCC
Confidence 988876 456789999887643
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. |
| >KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.1e-06 Score=81.84 Aligned_cols=97 Identities=16% Similarity=0.182 Sum_probs=66.9
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC----------------------C-----------hHH
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT----------------------P-----------FEG 223 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S----------------------s-----------~~~ 223 (468)
+-|.+||-||++++...|..+...| +.||-|.+++.|-+..+ + -+.
T Consensus 117 k~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irNeq 196 (399)
T KOG3847|consen 117 KYPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRNEQ 196 (399)
T ss_pred CccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeCHH
Confidence 4789999999999999999999999 77899999999866432 0 011
Q ss_pred H---HHHHHH---HHHHHh--------------------hcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCC
Q 012190 224 L---VKFVEE---TVRREH--------------------ASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNP 275 (468)
Q Consensus 224 ~---~~dl~~---~i~~~~--------------------~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p 275 (468)
. ++.... +++++. ..+.-.++.++|||+||+.++...+.+ ..++..|+++.
T Consensus 197 v~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~-t~FrcaI~lD~ 273 (399)
T KOG3847|consen 197 VGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSH-TDFRCAIALDA 273 (399)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccc-cceeeeeeeee
Confidence 1 111111 111111 112223588999999999999877776 45777777665
|
|
| >PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.46 E-value=1.9e-06 Score=80.19 Aligned_cols=100 Identities=16% Similarity=0.074 Sum_probs=72.3
Q ss_pred CCCeEEEeCCCCCchhhHHH----hHhhhcCCeEEEEecCCCCCCC--------ChHHHHHHHHHHHHHHhhcCCCCcEE
Q 012190 178 GSPTLLFLPGIDGLGLGLIL----HHKPLGKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSPEKPIY 245 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~----~~~~L~~~~~V~~~D~~G~G~S--------s~~~~~~dl~~~i~~~~~~~~~~~i~ 245 (468)
++..+||+||+..+...-.. +...+.-...++++.+|+.|.. +...-...+.++++.+....+.++|+
T Consensus 17 ~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I~ 96 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKRIH 96 (233)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceEE
Confidence 36699999999999764333 2233333348999999998854 24455667777777776666788999
Q ss_pred EEEeChhHHHHHHHHHh----CC-----CCceEEEEeCCCC
Q 012190 246 LVGDSFGGCLALAVAAR----NP-----TIDLILILSNPAT 277 (468)
Q Consensus 246 LvGhS~GG~ia~~~a~~----~P-----~~v~~lVli~p~~ 277 (468)
|++||||+.+.+..... .+ ..+..+|+++|-.
T Consensus 97 ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDi 137 (233)
T PF05990_consen 97 ILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDI 137 (233)
T ss_pred EEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCC
Confidence 99999999998877644 21 3677889988744
|
|
| >PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids [] | Back alignment and domain information |
|---|
Probab=98.45 E-value=5.3e-07 Score=82.33 Aligned_cols=82 Identities=17% Similarity=0.147 Sum_probs=56.2
Q ss_pred eEEEeCCCCC-chhhHHHhHhhh-cCCeE---EEEecCCCCCCCC-------hHHHHHHHHHHHHHHhhcCCCCcEEEEE
Q 012190 181 TLLFLPGIDG-LGLGLILHHKPL-GKAFE---VRCLHIPVYDRTP-------FEGLVKFVEETVRREHASSPEKPIYLVG 248 (468)
Q Consensus 181 ~lV~lHG~~~-s~~~~~~~~~~L-~~~~~---V~~~D~~G~G~Ss-------~~~~~~dl~~~i~~~~~~~~~~~i~LvG 248 (468)
||||+||.++ ....|..+.+.| +++|. |+++++-...... ..+.++.+.++++.+...-+. +|-|||
T Consensus 3 PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIVg 81 (219)
T PF01674_consen 3 PVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIVG 81 (219)
T ss_dssp -EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEEE
T ss_pred CEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEEE
Confidence 6999999999 667899999999 78888 8999985554422 223446788888887766667 999999
Q ss_pred eChhHHHHHHHHHhC
Q 012190 249 DSFGGCLALAVAARN 263 (468)
Q Consensus 249 hS~GG~ia~~~a~~~ 263 (468)
|||||.++-.+....
T Consensus 82 HS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 82 HSMGGTIARYYIKGG 96 (219)
T ss_dssp ETCHHHHHHHHHHHC
T ss_pred cCCcCHHHHHHHHHc
Confidence 999999988777544
|
This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A .... |
| >PLN02733 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=98.45 E-value=5.3e-07 Score=91.05 Aligned_cols=89 Identities=10% Similarity=-0.069 Sum_probs=70.5
Q ss_pred CCchhhHHHhHhhhcCCeEEEEecCCCCCCC-----ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhC
Q 012190 189 DGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-----PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARN 263 (468)
Q Consensus 189 ~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-----s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~ 263 (468)
......|..+++.|.+...+...|++|+|.+ ..++..+++.++++......+.++++|+||||||.++..++..+
T Consensus 104 ~~~~~~~~~li~~L~~~GY~~~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~ 183 (440)
T PLN02733 104 LDEVYYFHDMIEQLIKWGYKEGKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLH 183 (440)
T ss_pred cchHHHHHHHHHHHHHcCCccCCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHC
Confidence 3556789999999944333448899999875 25666777777777776667788999999999999999999988
Q ss_pred CC----CceEEEEeCCCC
Q 012190 264 PT----IDLILILSNPAT 277 (468)
Q Consensus 264 P~----~v~~lVli~p~~ 277 (468)
|+ .|+++|.++++.
T Consensus 184 p~~~~k~I~~~I~la~P~ 201 (440)
T PLN02733 184 SDVFEKYVNSWIAIAAPF 201 (440)
T ss_pred CHhHHhHhccEEEECCCC
Confidence 86 478889988765
|
|
| >PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria | Back alignment and domain information |
|---|
Probab=98.43 E-value=3.3e-05 Score=77.18 Aligned_cols=82 Identities=21% Similarity=0.267 Sum_probs=63.6
Q ss_pred hHhhhcCCeEEEEecC---CCCCCCChHHHHHHHHHHHHHHhhcCCCC-cEEEEEeChhHHHHHHHHHhCCCCceEEEEe
Q 012190 198 HHKPLGKAFEVRCLHI---PVYDRTPFEGLVKFVEETVRREHASSPEK-PIYLVGDSFGGCLALAVAARNPTIDLILILS 273 (468)
Q Consensus 198 ~~~~L~~~~~V~~~D~---~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~-~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli 273 (468)
+...|..|+.||.+.+ |--|+ +++|.......+++.+...++.. +.+|+|-+.||..++.+|+.+|+.+.-+|+.
T Consensus 93 vG~AL~~GHPvYFV~F~p~P~pgQ-Tl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvla 171 (581)
T PF11339_consen 93 VGVALRAGHPVYFVGFFPEPEPGQ-TLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLA 171 (581)
T ss_pred HHHHHHcCCCeEEEEecCCCCCCC-cHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCceeec
Confidence 4566767777776554 33333 68888888888888888777644 7889999999999999999999999888887
Q ss_pred CCCCCCC
Q 012190 274 NPATSFG 280 (468)
Q Consensus 274 ~p~~~~~ 280 (468)
+.+.+..
T Consensus 172 GaPlsyw 178 (581)
T PF11339_consen 172 GAPLSYW 178 (581)
T ss_pred CCCcccc
Confidence 7766443
|
Their function is unknown. |
| >PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3 | Back alignment and domain information |
|---|
Probab=98.42 E-value=7.5e-07 Score=86.99 Aligned_cols=102 Identities=18% Similarity=0.132 Sum_probs=65.6
Q ss_pred CCCCeEEEeCCCCCch--hhHHH-hHhhh-c---CCeEEEEecCCCCCCCC-------hHHHHHHHHHHHHHHhh--cCC
Q 012190 177 KGSPTLLFLPGIDGLG--LGLIL-HHKPL-G---KAFEVRCLHIPVYDRTP-------FEGLVKFVEETVRREHA--SSP 240 (468)
Q Consensus 177 ~~~p~lV~lHG~~~s~--~~~~~-~~~~L-~---~~~~V~~~D~~G~G~Ss-------~~~~~~dl~~~i~~~~~--~~~ 240 (468)
.+.|++|++||+.++. ..|.. +.+.+ . ..++|+++|+....... .....+.+..++..+.. ..+
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~g~~ 148 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINNFGVP 148 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH---
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhhcCCC
Confidence 3588999999999988 34544 44544 4 47999999995432221 34445555555555542 234
Q ss_pred CCcEEEEEeChhHHHHHHHHHhCCC--CceEEEEeCCCCC
Q 012190 241 EKPIYLVGDSFGGCLALAVAARNPT--IDLILILSNPATS 278 (468)
Q Consensus 241 ~~~i~LvGhS~GG~ia~~~a~~~P~--~v~~lVli~p~~~ 278 (468)
..+++|||||+||.+|-.++..... ++..+..++|+..
T Consensus 149 ~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 149 PENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGP 188 (331)
T ss_dssp GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-T
T ss_pred hhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccc
Confidence 6799999999999999988888777 8999999999764
|
1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A .... |
| >PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases | Back alignment and domain information |
|---|
Probab=98.26 E-value=8.6e-05 Score=71.51 Aligned_cols=80 Identities=20% Similarity=0.138 Sum_probs=51.2
Q ss_pred hHhhhcCCeEEEEecCCCCCCC--ChHHHHHHHHHHHHHHhhcC------CCCcEEEEEeChhHHHHHHHHHh----CCC
Q 012190 198 HHKPLGKAFEVRCLHIPVYDRT--PFEGLVKFVEETVRREHASS------PEKPIYLVGDSFGGCLALAVAAR----NPT 265 (468)
Q Consensus 198 ~~~~L~~~~~V~~~D~~G~G~S--s~~~~~~dl~~~i~~~~~~~------~~~~i~LvGhS~GG~ia~~~a~~----~P~ 265 (468)
+...|.+||.|++.|+.|.|.. .-...+..+.+.++..+... ...++.++|||-||.-++..|.. -||
T Consensus 19 l~~~L~~GyaVv~pDY~Glg~~y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~~~YApe 98 (290)
T PF03583_consen 19 LAAWLARGYAVVAPDYEGLGTPYLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELAPSYAPE 98 (290)
T ss_pred HHHHHHCCCEEEecCCCCCCCcccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHhHHhCcc
Confidence 4456699999999999999863 11233333333333333111 24689999999999988766643 355
Q ss_pred C---ceEEEEeCCCC
Q 012190 266 I---DLILILSNPAT 277 (468)
Q Consensus 266 ~---v~~lVli~p~~ 277 (468)
. +.+.++.+++.
T Consensus 99 L~~~l~Gaa~gg~~~ 113 (290)
T PF03583_consen 99 LNRDLVGAAAGGPPA 113 (290)
T ss_pred cccceeEEeccCCcc
Confidence 4 56777666544
|
Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process |
| >KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.25 E-value=9.8e-06 Score=81.62 Aligned_cols=163 Identities=17% Similarity=0.183 Sum_probs=109.3
Q ss_pred CCCCeEEEeCCCCC--chh----hHHHhHhhhcCCeEEEEecCCC-CCCCChHHHHHHHHHH----HHHHhhcCCCCcEE
Q 012190 177 KGSPTLLFLPGIDG--LGL----GLILHHKPLGKAFEVRCLHIPV-YDRTPFEGLVKFVEET----VRREHASSPEKPIY 245 (468)
Q Consensus 177 ~~~p~lV~lHG~~~--s~~----~~~~~~~~L~~~~~V~~~D~~G-~G~Ss~~~~~~dl~~~----i~~~~~~~~~~~i~ 245 (468)
+..|.+|++||.+. ... .|........+...|-++|++. .|.-.+...++.+..+ +.++..+++..+|+
T Consensus 174 ~~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG~nI~h~ae~~vSf~r~kvlei~gefpha~Ii 253 (784)
T KOG3253|consen 174 PASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGGANIKHAAEYSVSFDRYKVLEITGEFPHAPII 253 (784)
T ss_pred cCCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCCcchHHHHHHHHHHhhhhhhhhhccCCCCceE
Confidence 45788999999981 111 3344444446667888888864 4545544444444444 44555567889999
Q ss_pred EEEeChhHHHHHHHHHhCC-CCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccC
Q 012190 246 LVGDSFGGCLALAVAARNP-TIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENR 324 (468)
Q Consensus 246 LvGhS~GG~ia~~~a~~~P-~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (468)
|+|.|||+.++.+....+- ..|+++|+++=+......+
T Consensus 254 LvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgp----------------------------------------- 292 (784)
T KOG3253|consen 254 LVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGP----------------------------------------- 292 (784)
T ss_pred EEecccCceeeEEeccccCCceEEEEEEecccccCCCcc-----------------------------------------
Confidence 9999999998888776653 2377777765221100000
Q ss_pred CChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHH
Q 012190 325 LPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNN 404 (468)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~ 404 (468)
+. .+ .+.+-.++.|+|++.|.+|..++++ ..+.+.+
T Consensus 293 -------rg------------------ir------------------DE~Lldmk~PVLFV~Gsnd~mcspn-~ME~vre 328 (784)
T KOG3253|consen 293 -------RG------------------IR------------------DEALLDMKQPVLFVIGSNDHMCSPN-SMEEVRE 328 (784)
T ss_pred -------cC------------------Cc------------------chhhHhcCCceEEEecCCcccCCHH-HHHHHHH
Confidence 00 00 1334567899999999999999999 6999988
Q ss_pred hCC-CcEEEEeCCCCcccccc
Q 012190 405 SLQ-NCIVRNFKDNGHTLLLE 424 (468)
Q Consensus 405 ~l~-~~~~~~i~~aGH~~~~e 424 (468)
.+. ..+++++.+++|.+-.-
T Consensus 329 KMqA~~elhVI~~adhsmaip 349 (784)
T KOG3253|consen 329 KMQAEVELHVIGGADHSMAIP 349 (784)
T ss_pred HhhccceEEEecCCCccccCC
Confidence 775 67899999999987553
|
|
| >PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.20 E-value=5.4e-05 Score=77.03 Aligned_cols=104 Identities=19% Similarity=0.197 Sum_probs=70.3
Q ss_pred CCCCCeEEEeCCCCCchhhHHHhHh-------------------hhcCCeEEEEecCC-CCCCC----------ChHHHH
Q 012190 176 LKGSPTLLFLPGIDGLGLGLILHHK-------------------PLGKAFEVRCLHIP-VYDRT----------PFEGLV 225 (468)
Q Consensus 176 ~~~~p~lV~lHG~~~s~~~~~~~~~-------------------~L~~~~~V~~~D~~-G~G~S----------s~~~~~ 225 (468)
.++.|++|.+.|.+|++..+..+.+ .+.+..+++-+|.| |.|.| +.++.+
T Consensus 37 ~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a 116 (415)
T PF00450_consen 37 PEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLFIDQPVGTGFSYGNDPSDYVWNDDQAA 116 (415)
T ss_dssp GCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE--STTSTT-EESSGGGGS-SHHHHH
T ss_pred CCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccccceEEEeecCceEEeeccccccccchhhHHH
Confidence 3568999999999999887643321 11235789999966 88877 356777
Q ss_pred HHHHHHHHHHhhcCC---CCcEEEEEeChhHHHHHHHHHh----C------CCCceEEEEeCCCCCC
Q 012190 226 KFVEETVRREHASSP---EKPIYLVGDSFGGCLALAVAAR----N------PTIDLILILSNPATSF 279 (468)
Q Consensus 226 ~dl~~~i~~~~~~~~---~~~i~LvGhS~GG~ia~~~a~~----~------P~~v~~lVli~p~~~~ 279 (468)
+++.++++......+ ..+++|.|.|+||..+-.+|.. . +-.++|+++.+|....
T Consensus 117 ~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~dp 183 (415)
T PF00450_consen 117 EDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWIDP 183 (415)
T ss_dssp HHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SBH
T ss_pred HHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCccccc
Confidence 787777777665544 5699999999999987766643 3 3458899999987743
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A .... |
| >COG4099 Predicted peptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.20 E-value=2e-05 Score=73.09 Aligned_cols=114 Identities=18% Similarity=0.201 Sum_probs=67.1
Q ss_pred CCCCceeeeecCCC-CCCCCC-CeEEEeCCCCCchhhHH-HhHhhh--------cCCeEEEEecC-CCCCCCC------h
Q 012190 160 DGGPPRWFCPVDCG-RPLKGS-PTLLFLPGIDGLGLGLI-LHHKPL--------GKAFEVRCLHI-PVYDRTP------F 221 (468)
Q Consensus 160 dg~~~~~~~y~~~g-~~~~~~-p~lV~lHG~~~s~~~~~-~~~~~L--------~~~~~V~~~D~-~G~G~Ss------~ 221 (468)
-|..+.+.-|.+.+ +|.++- |.+||+||.|..+..-. .+...+ ..++-|+++.+ +-+..++ .
T Consensus 170 tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~~t~~~l 249 (387)
T COG4099 170 TGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEEKTLLYL 249 (387)
T ss_pred cCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEcccccccccccccccchhH
Confidence 34444444444322 222344 89999999988877432 222221 12344555542 1122221 2
Q ss_pred HHHHHHHHHHHH-HHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCC
Q 012190 222 EGLVKFVEETVR-REHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNP 275 (468)
Q Consensus 222 ~~~~~dl~~~i~-~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p 275 (468)
....+.+.+.+. +-+ ....+|+++|.|+||.-++.++.++|+.+.+.+++++
T Consensus 250 ~~~idli~~vlas~yn--ID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG 302 (387)
T COG4099 250 IEKIDLILEVLASTYN--IDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAG 302 (387)
T ss_pred HHHHHHHHHHHhhccC--cccceEEEEeecCcchhhHHHHHhCchhhheeeeecC
Confidence 223333332222 211 2356899999999999999999999999999999886
|
|
| >KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.19 E-value=6e-06 Score=77.75 Aligned_cols=93 Identities=16% Similarity=0.153 Sum_probs=64.4
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCC-------hHHHHHHHHH-HHHHHhhcCCCCcEEEEEeC
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP-------FEGLVKFVEE-TVRREHASSPEKPIYLVGDS 250 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss-------~~~~~~dl~~-~i~~~~~~~~~~~i~LvGhS 250 (468)
...|||.-|..|-.+. --....++.+|.|+.+++||++.|+ -...++.+.+ .|+.++ .+.+.|+|.|+|
T Consensus 243 q~LvIC~EGNAGFYEv-G~m~tP~~lgYsvLGwNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~Lg--f~~edIilygWS 319 (517)
T KOG1553|consen 243 QDLVICFEGNAGFYEV-GVMNTPAQLGYSVLGWNHPGFAGSTGLPYPVNTLNAADAVVQFAIQVLG--FRQEDIILYGWS 319 (517)
T ss_pred ceEEEEecCCccceEe-eeecChHHhCceeeccCCCCccccCCCCCcccchHHHHHHHHHHHHHcC--CCccceEEEEee
Confidence 4577888876554331 1123445679999999999999995 1112222222 233322 567789999999
Q ss_pred hhHHHHHHHHHhCCCCceEEEEeCC
Q 012190 251 FGGCLALAVAARNPTIDLILILSNP 275 (468)
Q Consensus 251 ~GG~ia~~~a~~~P~~v~~lVli~p 275 (468)
.||.-++.+|..+|+ |+++||-+.
T Consensus 320 IGGF~~~waAs~YPd-VkavvLDAt 343 (517)
T KOG1553|consen 320 IGGFPVAWAASNYPD-VKAVVLDAT 343 (517)
T ss_pred cCCchHHHHhhcCCC-ceEEEeecc
Confidence 999999999999986 888888654
|
|
| >KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.17 E-value=4.2e-05 Score=77.72 Aligned_cols=99 Identities=23% Similarity=0.224 Sum_probs=76.0
Q ss_pred CCCCeEEEeCCCCCchh---hH-----HHhHhhh-cCCeEEEEecCCCCCC---------------CChHHHHHHHHHHH
Q 012190 177 KGSPTLLFLPGIDGLGL---GL-----ILHHKPL-GKAFEVRCLHIPVYDR---------------TPFEGLVKFVEETV 232 (468)
Q Consensus 177 ~~~p~lV~lHG~~~s~~---~~-----~~~~~~L-~~~~~V~~~D~~G~G~---------------Ss~~~~~~dl~~~i 232 (468)
++-|+++++=|.++... .| .++ ..| +.||-|+++|-||--. -+++|.++-+.-+.
T Consensus 640 kkYptvl~VYGGP~VQlVnnsfkgi~ylR~-~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~La 718 (867)
T KOG2281|consen 640 KKYPTVLNVYGGPGVQLVNNSFKGIQYLRF-CRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLA 718 (867)
T ss_pred CCCceEEEEcCCCceEEeeccccceehhhh-hhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHH
Confidence 35789999999877644 22 222 234 6799999999998532 25889999888888
Q ss_pred HHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 233 RREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 233 ~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
++.+ -..-.+|.+-|+|+||.+++...+++|+.++..|.-+|.+
T Consensus 719 eq~g-fidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT 762 (867)
T KOG2281|consen 719 EQTG-FIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVT 762 (867)
T ss_pred HhcC-cccchheeEeccccccHHHHHHhhcCcceeeEEeccCcce
Confidence 8764 1234589999999999999999999999998888766644
|
|
| >PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=98.12 E-value=9.3e-05 Score=66.95 Aligned_cols=79 Identities=22% Similarity=0.116 Sum_probs=53.8
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhhcCCeE-EEEecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHH
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPLGKAFE-VRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLAL 257 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~~~~-V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~ 257 (468)
+..|||..|+|.....+.++. +..++. ++|+|+|..... . + + ...+.|.|||+|||-.+|.
T Consensus 11 ~~LilfF~GWg~d~~~f~hL~--~~~~~D~l~~yDYr~l~~d----~--~----~------~~y~~i~lvAWSmGVw~A~ 72 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFSHLI--LPENYDVLICYDYRDLDFD----F--D----L------SGYREIYLVAWSMGVWAAN 72 (213)
T ss_pred CeEEEEEecCCCChHHhhhcc--CCCCccEEEEecCcccccc----c--c----c------ccCceEEEEEEeHHHHHHH
Confidence 458999999999998887654 233444 467888854321 0 1 1 1345899999999999988
Q ss_pred HHHHhCCCCceEEEEeCCCC
Q 012190 258 AVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 258 ~~a~~~P~~v~~lVli~p~~ 277 (468)
.+.... .++..|.+++..
T Consensus 73 ~~l~~~--~~~~aiAINGT~ 90 (213)
T PF04301_consen 73 RVLQGI--PFKRAIAINGTP 90 (213)
T ss_pred HHhccC--CcceeEEEECCC
Confidence 876654 356677777644
|
|
| >PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins | Back alignment and domain information |
|---|
Probab=98.12 E-value=8.8e-05 Score=70.71 Aligned_cols=86 Identities=19% Similarity=0.127 Sum_probs=66.8
Q ss_pred CCCeEEEeCCCCCchhhHH------HhHhhh--cCCeEEEEecCCCCCCC----ChHHHHHHHHHHHHHHhhcC---CCC
Q 012190 178 GSPTLLFLPGIDGLGLGLI------LHHKPL--GKAFEVRCLHIPVYDRT----PFEGLVKFVEETVRREHASS---PEK 242 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~------~~~~~L--~~~~~V~~~D~~G~G~S----s~~~~~~dl~~~i~~~~~~~---~~~ 242 (468)
+...||+.-|.++.-+... ..+..+ ..+.+|+.+.+||.|.| +.++++++-.+.++.+..+. ..+
T Consensus 136 ~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~s~~dLv~~~~a~v~yL~d~~~G~ka~ 215 (365)
T PF05677_consen 136 PQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPPSRKDLVKDYQACVRYLRDEEQGPKAK 215 (365)
T ss_pred CCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCCCHHHHHHHHHHHHHHHHhcccCCChh
Confidence 4679999999887776511 223333 34689999999999988 47899999999999887532 347
Q ss_pred cEEEEEeChhHHHHHHHHHhC
Q 012190 243 PIYLVGDSFGGCLALAVAARN 263 (468)
Q Consensus 243 ~i~LvGhS~GG~ia~~~a~~~ 263 (468)
.|++.|||+||.++...+.++
T Consensus 216 ~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 216 NIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred eEEEeeccccHHHHHHHHHhc
Confidence 899999999999999866665
|
|
| >KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.09 E-value=3.6e-05 Score=68.40 Aligned_cols=100 Identities=14% Similarity=0.109 Sum_probs=77.2
Q ss_pred CeEEEeCCCCCchh---hHHHhHhhh-cCCeEEEEecC----CCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeCh
Q 012190 180 PTLLFLPGIDGLGL---GLILHHKPL-GKAFEVRCLHI----PVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSF 251 (468)
Q Consensus 180 p~lV~lHG~~~s~~---~~~~~~~~L-~~~~~V~~~D~----~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~ 251 (468)
-.|||+-|++..-. ....+..+| ..+|.++-+-+ -|+|.+++.+-++|+..+++++....-...|+|+|||.
T Consensus 37 ~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL~GhST 116 (299)
T KOG4840|consen 37 VKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTFSLKDDVEDLKCLLEHIQLCGFSTDVVLVGHST 116 (299)
T ss_pred EEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccccccccccccccHHHHHHHHHHhhccCcccceEEEecCc
Confidence 46899999887755 345566777 66788887765 48899999999999999999876544456899999999
Q ss_pred hHHHHHHHHHh--CCCCceEEEEeCCCCCC
Q 012190 252 GGCLALAVAAR--NPTIDLILILSNPATSF 279 (468)
Q Consensus 252 GG~ia~~~a~~--~P~~v~~lVli~p~~~~ 279 (468)
|+.=.+.+..+ .|..+.+.|+.+|....
T Consensus 117 GcQdi~yYlTnt~~~r~iraaIlqApVSDr 146 (299)
T KOG4840|consen 117 GCQDIMYYLTNTTKDRKIRAAILQAPVSDR 146 (299)
T ss_pred cchHHHHHHHhccchHHHHHHHHhCccchh
Confidence 99988888733 45678888888876643
|
|
| >PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases | Back alignment and domain information |
|---|
Probab=98.09 E-value=9.8e-06 Score=74.68 Aligned_cols=84 Identities=17% Similarity=0.216 Sum_probs=49.9
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhcC---CeEEEEecCCCC---C-CC--ChHHHHHHHHHHHHHHhhcCCC--CcEEE
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLGK---AFEVRCLHIPVY---D-RT--PFEGLVKFVEETVRREHASSPE--KPIYL 246 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~---~~~V~~~D~~G~---G-~S--s~~~~~~dl~~~i~~~~~~~~~--~~i~L 246 (468)
+...|||+||+.|+...|..+...+.. .+.-..+...++ . .+ +++..++.+.+-+......... .+|.+
T Consensus 3 ~~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~Isf 82 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEFKTFDGIDVCGERLAEEILEHIKDYESKIRKISF 82 (217)
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccccccchhhHHHHHHHHHHHHHhccccccccccceE
Confidence 355899999999999998877666633 221111111111 1 11 3555555544433333322333 48999
Q ss_pred EEeChhHHHHHHHHH
Q 012190 247 VGDSFGGCLALAVAA 261 (468)
Q Consensus 247 vGhS~GG~ia~~~a~ 261 (468)
|||||||.++-.+..
T Consensus 83 IgHSLGGli~r~al~ 97 (217)
T PF05057_consen 83 IGHSLGGLIARYALG 97 (217)
T ss_pred EEecccHHHHHHHHH
Confidence 999999999764443
|
|
| >COG4782 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.05 E-value=3.2e-05 Score=74.09 Aligned_cols=100 Identities=19% Similarity=0.174 Sum_probs=75.0
Q ss_pred CCCeEEEeCCCCCchhh----HHHhHhhhcCCeEEEEecCCCCCCC--------ChHHHHHHHHHHHHHHhhcCCCCcEE
Q 012190 178 GSPTLLFLPGIDGLGLG----LILHHKPLGKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSPEKPIY 245 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~----~~~~~~~L~~~~~V~~~D~~G~G~S--------s~~~~~~dl~~~i~~~~~~~~~~~i~ 245 (468)
++..+||+||+..+-.. ...+..........+.+.+|..|.- +.+.-..+++.+++.+....+.++|+
T Consensus 115 ~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I~ 194 (377)
T COG4782 115 AKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRIY 194 (377)
T ss_pred CCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceEE
Confidence 57799999999887663 2233344455678888999877643 46666778888888888777789999
Q ss_pred EEEeChhHHHHHHHHHh--------CCCCceEEEEeCCCC
Q 012190 246 LVGDSFGGCLALAVAAR--------NPTIDLILILSNPAT 277 (468)
Q Consensus 246 LvGhS~GG~ia~~~a~~--------~P~~v~~lVli~p~~ 277 (468)
|++||||..++++.... .+.+++-+||.+|-.
T Consensus 195 ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDi 234 (377)
T COG4782 195 LLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDI 234 (377)
T ss_pred EEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCC
Confidence 99999999999877754 245677788877644
|
|
| >PRK10439 enterobactin/ferric enterobactin esterase; Provisional | Back alignment and domain information |
|---|
Probab=98.02 E-value=0.00028 Score=71.27 Aligned_cols=113 Identities=15% Similarity=0.060 Sum_probs=66.6
Q ss_pred eeeeecCCCCCCCCCCeEEEeCCCCCchh-hHHHhHhhh-cCC----eEEEEecCCC-CCCC----C----hHHHHHHHH
Q 012190 165 RWFCPVDCGRPLKGSPTLLFLPGIDGLGL-GLILHHKPL-GKA----FEVRCLHIPV-YDRT----P----FEGLVKFVE 229 (468)
Q Consensus 165 ~~~~y~~~g~~~~~~p~lV~lHG~~~s~~-~~~~~~~~L-~~~----~~V~~~D~~G-~G~S----s----~~~~~~dl~ 229 (468)
+..-|.+.+-..+.-|+|+++||-.-... .....+..| ..+ .-++.+|... ..++ . .+.+++++.
T Consensus 195 ~v~VY~P~~y~~~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l~~eLl 274 (411)
T PRK10439 195 RVWIYTTGDAAPEERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAVQQELL 274 (411)
T ss_pred EEEEEECCCCCCCCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHHHHHHH
Confidence 34444444321235789999999542111 112223333 332 3456676532 1121 1 233445555
Q ss_pred HHHHHHhh-cCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 230 ETVRREHA-SSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 230 ~~i~~~~~-~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
-++++... ....++.+|.|+||||..|+.++.++|+.+.+++.+++..
T Consensus 275 P~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 275 PQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred HHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 55555321 1234578899999999999999999999999999998754
|
|
| >COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.99 E-value=4.4e-05 Score=69.33 Aligned_cols=98 Identities=12% Similarity=0.018 Sum_probs=75.1
Q ss_pred CeEEEeCCCCCchhhHHHhHhhhcCCeE------EEEecCCCC----------------------CCCChHHHHHHHHHH
Q 012190 180 PTLLFLPGIDGLGLGLILHHKPLGKAFE------VRCLHIPVY----------------------DRTPFEGLVKFVEET 231 (468)
Q Consensus 180 p~lV~lHG~~~s~~~~~~~~~~L~~~~~------V~~~D~~G~----------------------G~Ss~~~~~~dl~~~ 231 (468)
-|.||+||++|+...+...+..|...++ +..+|--|- ++.+..++...+..+
T Consensus 46 iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~ 125 (288)
T COG4814 46 IPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKA 125 (288)
T ss_pred cceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHH
Confidence 3689999999999999999988855442 334444431 122467788889999
Q ss_pred HHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCC-----CceEEEEeCCCC
Q 012190 232 VRREHASSPEKPIYLVGDSFGGCLALAVAARNPT-----IDLILILSNPAT 277 (468)
Q Consensus 232 i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~-----~v~~lVli~p~~ 277 (468)
+..+.....-.++.++||||||.-...++..+.. .+..+|.++..+
T Consensus 126 msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpf 176 (288)
T COG4814 126 MSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPF 176 (288)
T ss_pred HHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccc
Confidence 9998888888899999999999999999987532 477888887655
|
|
| >COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=97.98 E-value=7.3e-05 Score=69.76 Aligned_cols=117 Identities=22% Similarity=0.208 Sum_probs=79.3
Q ss_pred CCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhH--hhh--cCCeEEEEecC-C------CCCCC----C---h
Q 012190 160 DGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHH--KPL--GKAFEVRCLHI-P------VYDRT----P---F 221 (468)
Q Consensus 160 dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~--~~L--~~~~~V~~~D~-~------G~G~S----s---~ 221 (468)
+|..+.+..|.+.+.+ .+.|.||++||.++++..+.... ..| ..+|-|..+|- + +++.+ + -
T Consensus 43 ~g~~r~y~l~vP~g~~-~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g 121 (312)
T COG3509 43 NGLKRSYRLYVPPGLP-SGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRRRG 121 (312)
T ss_pred CCCccceEEEcCCCCC-CCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCcccccCC
Confidence 3444455556666664 34589999999999999877655 666 34688888752 1 22222 1 1
Q ss_pred HHHHHHHHHHHHHHhhcCC--CCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 222 EGLVKFVEETVRREHASSP--EKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 222 ~~~~~dl~~~i~~~~~~~~--~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
-+-+..|.+++..+..+.. ..+|++.|.|-||.++..++..+|+.+.++..++...
T Consensus 122 ~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 122 VDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred ccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 1233444444444444343 4589999999999999999999999999888877644
|
|
| >PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.00044 Score=64.76 Aligned_cols=61 Identities=15% Similarity=0.209 Sum_probs=49.9
Q ss_pred ccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC----CcEEEEeCCCCcccccc-CcHHHHHHHHhcCcc
Q 012190 376 HAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ----NCIVRNFKDNGHTLLLE-EGISLLTIIKGTCKY 439 (468)
Q Consensus 376 ~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~----~~~~~~i~~aGH~~~~e-~p~~~~~~I~~~~F~ 439 (468)
...++|-|+|+++.|.+++.+ +.++..+... +++.+.+++++|..|+. +|++..+++. +||
T Consensus 175 ~~~~~p~lylYS~~D~l~~~~-~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~--~fw 240 (240)
T PF05705_consen 175 SPSRCPRLYLYSKADPLIPWR-DVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVD--EFW 240 (240)
T ss_pred CCCCCCeEEecCCCCcCcCHH-HHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHH--hhC
Confidence 455799999999999999998 6777765543 46788899999998885 8999999998 554
|
|
| >COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.94 E-value=2.5e-05 Score=76.82 Aligned_cols=99 Identities=14% Similarity=0.059 Sum_probs=72.4
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhh-cCCeE---EEEecCCCCCCC-ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhH
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPL-GKAFE---VRCLHIPVYDRT-PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGG 253 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~---V~~~D~~G~G~S-s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG 253 (468)
.-++|++||++.+...|..+...+ ..++. ++++++++-... +.....+.+...++......+.+++.|+||||||
T Consensus 59 ~~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ql~~~V~~~l~~~ga~~v~LigHS~GG 138 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGGDGTYSLAVRGEQLFAYVDEVLAKTGAKKVNLIGHSMGG 138 (336)
T ss_pred CceEEEEccCcCCcchhhhhhhhhcchHHHhcccccccccccCCCccccccHHHHHHHHHHHHhhcCCCceEEEeecccc
Confidence 337999999988888888877777 34455 888888855222 3333344444444444444666799999999999
Q ss_pred HHHHHHHHhCC--CCceEEEEeCCCC
Q 012190 254 CLALAVAARNP--TIDLILILSNPAT 277 (468)
Q Consensus 254 ~ia~~~a~~~P--~~v~~lVli~p~~ 277 (468)
.++..++...+ .+|+.++.++++-
T Consensus 139 ~~~ry~~~~~~~~~~V~~~~tl~tp~ 164 (336)
T COG1075 139 LDSRYYLGVLGGANRVASVVTLGTPH 164 (336)
T ss_pred hhhHHHHhhcCccceEEEEEEeccCC
Confidence 99999999888 8899999988754
|
|
| >PLN02606 palmitoyl-protein thioesterase | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00047 Score=65.32 Aligned_cols=96 Identities=10% Similarity=0.071 Sum_probs=66.3
Q ss_pred CCeEEEeCCCC--CchhhHHHhHhhhc--CCeEEEEecCCCCCC-C----ChHHHHHHHHHHHHHHhhcCCCCcEEEEEe
Q 012190 179 SPTLLFLPGID--GLGLGLILHHKPLG--KAFEVRCLHIPVYDR-T----PFEGLVKFVEETVRREHASSPEKPIYLVGD 249 (468)
Q Consensus 179 ~p~lV~lHG~~--~s~~~~~~~~~~L~--~~~~V~~~D~~G~G~-S----s~~~~~~dl~~~i~~~~~~~~~~~i~LvGh 249 (468)
..|||+.||++ ++...+..+.+.+. .++.+.++. .|-|. + .+.+.++.+.+.+..... + ..-++++|+
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~~s~~~~~~~Qv~~vce~l~~~~~-L-~~G~naIGf 102 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQDSLFMPLRQQASIACEKIKQMKE-L-SEGYNIVAE 102 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCcccccccCHHHHHHHHHHHHhcchh-h-cCceEEEEE
Confidence 44799999999 55556767666664 255444444 33344 2 345666666666665222 2 236999999
Q ss_pred ChhHHHHHHHHHhCCC--CceEEEEeCCCC
Q 012190 250 SFGGCLALAVAARNPT--IDLILILSNPAT 277 (468)
Q Consensus 250 S~GG~ia~~~a~~~P~--~v~~lVli~p~~ 277 (468)
|.||.++-.++.+.|+ .|+.+|-++++.
T Consensus 103 SQGglflRa~ierc~~~p~V~nlISlggph 132 (306)
T PLN02606 103 SQGNLVARGLIEFCDNAPPVINYVSLGGPH 132 (306)
T ss_pred cchhHHHHHHHHHCCCCCCcceEEEecCCc
Confidence 9999999999999877 599999988754
|
|
| >PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A | Back alignment and domain information |
|---|
Probab=97.90 E-value=4.6e-05 Score=74.18 Aligned_cols=97 Identities=15% Similarity=0.008 Sum_probs=57.0
Q ss_pred CCCeEEEeCCCCCchhhHH------------------HhHhhh-cCCeEEEEecCCCCCCCC------------h-----
Q 012190 178 GSPTLLFLPGIDGLGLGLI------------------LHHKPL-GKAFEVRCLHIPVYDRTP------------F----- 221 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~------------------~~~~~L-~~~~~V~~~D~~G~G~Ss------------~----- 221 (468)
.-|.||++||-++...... .....| .+||-|+++|.+|+|+.. .
T Consensus 114 p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~ 193 (390)
T PF12715_consen 114 PFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALAR 193 (390)
T ss_dssp -EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHH
T ss_pred CCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHHH
Confidence 4789999999988764321 123455 568999999999998541 0
Q ss_pred ----------HHHHHHHHHHHHHHhhc--CCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCC
Q 012190 222 ----------EGLVKFVEETVRREHAS--SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNP 275 (468)
Q Consensus 222 ----------~~~~~dl~~~i~~~~~~--~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p 275 (468)
...+-|....++.+... ...++|.++|+||||..++.+|+.. ++|++.|..+-
T Consensus 194 ~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~~ 258 (390)
T PF12715_consen 194 NLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALD-DRIKATVANGY 258 (390)
T ss_dssp HHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--TT--EEEEES-
T ss_pred HHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcc-hhhHhHhhhhh
Confidence 11122223344444322 2356899999999999999999987 68888877653
|
|
| >COG3150 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.0003 Score=59.92 Aligned_cols=86 Identities=21% Similarity=0.234 Sum_probs=61.2
Q ss_pred EEEeCCCCCchhhHHHhH--hhhcCC---eEEEEecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHH
Q 012190 182 LLFLPGIDGLGLGLILHH--KPLGKA---FEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLA 256 (468)
Q Consensus 182 lV~lHG~~~s~~~~~~~~--~~L~~~---~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia 256 (468)
||++|||.+|........ +.+... ....++.+| .+....++.++.++.+. ..+...|+|-|+||..|
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~~~~i~y~~p~l~----h~p~~a~~ele~~i~~~----~~~~p~ivGssLGGY~A 73 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDEDVRDIEYSTPHLP----HDPQQALKELEKAVQEL----GDESPLIVGSSLGGYYA 73 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhccccceeeecCCCC----CCHHHHHHHHHHHHHHc----CCCCceEEeecchHHHH
Confidence 799999999988776532 344332 344444444 34678888888888874 44457899999999999
Q ss_pred HHHHHhCCCCceEEEEeCCCCC
Q 012190 257 LAVAARNPTIDLILILSNPATS 278 (468)
Q Consensus 257 ~~~a~~~P~~v~~lVli~p~~~ 278 (468)
.+++.++ .++ .|+++|+..
T Consensus 74 t~l~~~~--Gir-av~~NPav~ 92 (191)
T COG3150 74 TWLGFLC--GIR-AVVFNPAVR 92 (191)
T ss_pred HHHHHHh--CCh-hhhcCCCcC
Confidence 9999997 343 566677553
|
|
| >PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae | Back alignment and domain information |
|---|
Probab=97.83 E-value=3.7e-05 Score=72.49 Aligned_cols=111 Identities=20% Similarity=0.182 Sum_probs=68.1
Q ss_pred eecCCC-CCCCCCCeEEEeCCCCCchhhH--HHhHhhh-cC----CeEEEEecCCCCC-----------------CC---
Q 012190 168 CPVDCG-RPLKGSPTLLFLPGIDGLGLGL--ILHHKPL-GK----AFEVRCLHIPVYD-----------------RT--- 219 (468)
Q Consensus 168 ~y~~~g-~~~~~~p~lV~lHG~~~s~~~~--~~~~~~L-~~----~~~V~~~D~~G~G-----------------~S--- 219 (468)
-|.+.+ .+.+.-|+|+++||.......+ ...+..+ .+ ..-+++++..+.+ ..
T Consensus 12 VylP~~y~~~~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (251)
T PF00756_consen 12 VYLPPGYDPSKPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSGGG 91 (251)
T ss_dssp EEECTTGGTTTTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTTTH
T ss_pred EEECCCCCCCCCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccccCCCC
Confidence 344443 2334578999999982222222 2223333 22 1445666654444 00
Q ss_pred -Ch-HHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCC
Q 012190 220 -PF-EGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSF 279 (468)
Q Consensus 220 -s~-~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~ 279 (468)
.+ +.+.++|...|+......+.+ ..++|+||||..|+.++.+||+.+.++++++|....
T Consensus 92 ~~~~~~l~~el~p~i~~~~~~~~~~-~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 92 DAYETFLTEELIPYIEANYRTDPDR-RAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDP 152 (251)
T ss_dssp HHHHHHHHTHHHHHHHHHSSEEECC-EEEEEETHHHHHHHHHHHHSTTTESEEEEESEESET
T ss_pred cccceehhccchhHHHHhcccccce-eEEeccCCCcHHHHHHHHhCccccccccccCccccc
Confidence 12 334456666666644322222 799999999999999999999999999999986543
|
; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D .... |
| >PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00034 Score=68.55 Aligned_cols=115 Identities=22% Similarity=0.175 Sum_probs=76.0
Q ss_pred eeeeecCCCCCCCCCCeEEEeCCCCCchhhHH-------HhHhhhcCCeEEEEecCCCCC----CCChHHHHHHHHHHHH
Q 012190 165 RWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLI-------LHHKPLGKAFEVRCLHIPVYD----RTPFEGLVKFVEETVR 233 (468)
Q Consensus 165 ~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~-------~~~~~L~~~~~V~~~D~~G~G----~Ss~~~~~~dl~~~i~ 233 (468)
.|+.-.+.....++.|+||++||.|....... .+...|. ...++++|+.-.. ...+.....++.+..+
T Consensus 108 ~Wlvk~P~~~~pk~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~ 186 (374)
T PF10340_consen 108 YWLVKAPNRFKPKSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-EVSILVLDYSLTSSDEHGHKYPTQLRQLVATYD 186 (374)
T ss_pred EEEEeCCcccCCCCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-CCeEEEEeccccccccCCCcCchHHHHHHHHHH
Confidence 67654333321234699999999876654222 2223344 5588888886444 3345666666666666
Q ss_pred HHhhcCCCCcEEEEEeChhHHHHHHHHHhCC-----CCceEEEEeCCCCCCC
Q 012190 234 REHASSPEKPIYLVGDSFGGCLALAVAARNP-----TIDLILILSNPATSFG 280 (468)
Q Consensus 234 ~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P-----~~v~~lVli~p~~~~~ 280 (468)
++....+.+.|+|+|-|.||.+++.+..... ..-+++||++|+....
T Consensus 187 ~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 187 YLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred HHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 6664457789999999999999998775421 2246899999988665
|
In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved []. |
| >PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00027 Score=72.41 Aligned_cols=99 Identities=22% Similarity=0.231 Sum_probs=67.6
Q ss_pred CCCeEEEeCCCCCchhh-H--HHhHhhhcC--CeEEEEecCCCCCCC--------------ChHHHHHHHHHHHHHHhhc
Q 012190 178 GSPTLLFLPGIDGLGLG-L--ILHHKPLGK--AFEVRCLHIPVYDRT--------------PFEGLVKFVEETVRREHAS 238 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~-~--~~~~~~L~~--~~~V~~~D~~G~G~S--------------s~~~~~~dl~~~i~~~~~~ 238 (468)
++|++|++ |.-+.... + ..++..|++ +--++++++|-+|.| +.++..+|+..+++++...
T Consensus 28 ~gpifl~~-ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~ 106 (434)
T PF05577_consen 28 GGPIFLYI-GGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKK 106 (434)
T ss_dssp TSEEEEEE---SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEE-CCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHh
Confidence 35655555 44444432 2 224445533 578999999999998 4788889999999888854
Q ss_pred C---CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 239 S---PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 239 ~---~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
. ...|++++|-|+||++|..+-.+||+.+.|.+..+++.
T Consensus 107 ~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv 148 (434)
T PF05577_consen 107 YNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPV 148 (434)
T ss_dssp TTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--C
T ss_pred hcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEecccee
Confidence 3 35699999999999999999999999999999988766
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C. |
| >KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00035 Score=72.91 Aligned_cols=99 Identities=16% Similarity=0.165 Sum_probs=62.5
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhh-----------------cCCeEEEEecCCC-----CCCCChHHHHHHHHHHHHHH
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPL-----------------GKAFEVRCLHIPV-----YDRTPFEGLVKFVEETVRRE 235 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-----------------~~~~~V~~~D~~G-----~G~Ss~~~~~~dl~~~i~~~ 235 (468)
++-||+|++|..|+....+.++..- ...|+.++.|+-+ ||+ ++.+.++.+.+.|+..
T Consensus 88 sGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe~tAm~G~-~l~dQtEYV~dAIk~I 166 (973)
T KOG3724|consen 88 SGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEEFTAMHGH-ILLDQTEYVNDAIKYI 166 (973)
T ss_pred CCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccchhhhhccH-hHHHHHHHHHHHHHHH
Confidence 3557999999999988766554322 1246777777643 333 4666666666666654
Q ss_pred hhcCC---------CCcEEEEEeChhHHHHHHHHHh---CCCCceEEEEeCCCC
Q 012190 236 HASSP---------EKPIYLVGDSFGGCLALAVAAR---NPTIDLILILSNPAT 277 (468)
Q Consensus 236 ~~~~~---------~~~i~LvGhS~GG~ia~~~a~~---~P~~v~~lVli~p~~ 277 (468)
..... .+.|+|+||||||.+|...+.. .+..|.-++..+.+.
T Consensus 167 LslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH 220 (973)
T KOG3724|consen 167 LSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPH 220 (973)
T ss_pred HHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcc
Confidence 43211 3459999999999999865543 234454455555443
|
|
| >PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.003 Score=59.48 Aligned_cols=96 Identities=16% Similarity=0.057 Sum_probs=53.9
Q ss_pred CCeEEEeCCCCCchh---hHHH---hHhhhcCCeEEEEecCCCCCCC---------ChHHHHHHHHHHHHHHhhcCCCCc
Q 012190 179 SPTLLFLPGIDGLGL---GLIL---HHKPLGKAFEVRCLHIPVYDRT---------PFEGLVKFVEETVRREHASSPEKP 243 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~---~~~~---~~~~L~~~~~V~~~D~~G~G~S---------s~~~~~~dl~~~i~~~~~~~~~~~ 243 (468)
..|||+.||+|.+.. .+.. +++..-.+--|.+++. |.+.+ .+.+.++.+.+.++..... ..-
T Consensus 5 ~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~i-g~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L--~~G 81 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEI-GNDPSEDVENSFFGNVNDQVEQVCEQLANDPEL--ANG 81 (279)
T ss_dssp S--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--S-SSSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGG--TT-
T ss_pred CCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEE-CCCcchhhhhhHHHHHHHHHHHHHHHHhhChhh--hcc
Confidence 447999999997642 3333 4444445677777776 33321 2456666666666652221 246
Q ss_pred EEEEEeChhHHHHHHHHHhCCC-CceEEEEeCCCC
Q 012190 244 IYLVGDSFGGCLALAVAARNPT-IDLILILSNPAT 277 (468)
Q Consensus 244 i~LvGhS~GG~ia~~~a~~~P~-~v~~lVli~p~~ 277 (468)
++++|+|.||.++-.++.+.|+ .|..+|.++++.
T Consensus 82 ~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph 116 (279)
T PF02089_consen 82 FNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPH 116 (279)
T ss_dssp EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--T
T ss_pred eeeeeeccccHHHHHHHHHCCCCCceeEEEecCcc
Confidence 9999999999999999999864 699999988754
|
Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A. |
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00098 Score=68.73 Aligned_cols=203 Identities=20% Similarity=0.239 Sum_probs=116.1
Q ss_pred CCCeEEEeCCCCCchh--hHHHhHhhh-cCCeEEEEecCCCCCCC---------------ChHHHHHHHHHHHHHHhhcC
Q 012190 178 GSPTLLFLPGIDGLGL--GLILHHKPL-GKAFEVRCLHIPVYDRT---------------PFEGLVKFVEETVRREHASS 239 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~--~~~~~~~~L-~~~~~V~~~D~~G~G~S---------------s~~~~~~dl~~~i~~~~~~~ 239 (468)
++|+++..=|.-|... .|....-.| .+|+---.-+.||=|.- ++.|+.+....++++-..
T Consensus 447 ~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~-- 524 (682)
T COG1770 447 SAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYT-- 524 (682)
T ss_pred CCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcC--
Confidence 4676666555544433 233222233 55554444566776532 688888887777776321
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHH
Q 012190 240 PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMV 319 (468)
Q Consensus 240 ~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (468)
..+.++++|-|.||+++-..+...|+.+.++|+--|...+-...+....++-. ..+ ...++|..
T Consensus 525 ~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvltTMlD~slPLT~-------~E~-----~EWGNP~d---- 588 (682)
T COG1770 525 SPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTTMLDPSLPLTV-------TEW-----DEWGNPLD---- 588 (682)
T ss_pred CccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhhhhcCCCCCCCc-------cch-----hhhCCcCC----
Confidence 24589999999999999999999999999999987765443222211111000 000 01122211
Q ss_pred hhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhc-ccCCceEEEEEeCCCCCCCcHHH
Q 012190 320 NIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRL-HAVKAEVLVLASGKDNMLPSEDE 398 (468)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l-~~i~~PvLlI~G~~D~~v~~~~~ 398 (468)
++. ...+++...+ +.+ ++---|+|++.|.+|+.|... +
T Consensus 589 ------------~e~--------------------------y~yikSYSPY--dNV~a~~YP~ilv~~Gl~D~rV~Yw-E 627 (682)
T COG1770 589 ------------PEY--------------------------YDYIKSYSPY--DNVEAQPYPAILVTTGLNDPRVQYW-E 627 (682)
T ss_pred ------------HHH--------------------------HHHHhhcCch--hccccCCCCceEEEccccCCccccc-h
Confidence 011 1111111111 111 223357999999999999988 4
Q ss_pred HHHHHHhCC----Cc---EEEEeCCCCccccccCcHHHHHHHHhcCcc
Q 012190 399 AKRLNNSLQ----NC---IVRNFKDNGHTLLLEEGISLLTIIKGTCKY 439 (468)
Q Consensus 399 ~~~l~~~l~----~~---~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~ 439 (468)
..++.+.+. +. -+.+=.++||...-.+.+...+.-.+..|.
T Consensus 628 pAKWvAkLR~~~td~~plLlkt~M~aGHgG~SgRf~~lee~A~eYaF~ 675 (682)
T COG1770 628 PAKWVAKLRELKTDGNPLLLKTNMDAGHGGASGRFQRLEEIAFEYAFL 675 (682)
T ss_pred HHHHHHHHhhcccCCCcEEEEecccccCCCCCCchHHHHHHHHHHHHH
Confidence 555555442 22 222225799988888877777766655554
|
|
| >COG2936 Predicted acyl esterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.0016 Score=66.88 Aligned_cols=127 Identities=13% Similarity=-0.018 Sum_probs=84.2
Q ss_pred HHhccCccCCCCCCceeeeecCCCCCCCCCCeEEEeC--CCCCch---hhHHHhHh---hh-cCCeEEEEecCCCCCCCC
Q 012190 150 LDAAKEIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLP--GIDGLG---LGLILHHK---PL-GKAFEVRCLHIPVYDRTP 220 (468)
Q Consensus 150 ~~~~~~~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lH--G~~~s~---~~~~~~~~---~L-~~~~~V~~~D~~G~G~Ss 220 (468)
.+....++..||..+..-.|.+.+. ...|+++..+ -+.-.. ..-....+ .+ +.+|.|+..|.||.|.|.
T Consensus 18 ~~~~v~V~MRDGvrL~~dIy~Pa~~--g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~Se 95 (563)
T COG2936 18 IERDVMVPMRDGVRLAADIYRPAGA--GPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSE 95 (563)
T ss_pred eeeeeeEEecCCeEEEEEEEccCCC--CCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCC
Confidence 3344556788998877666776644 2478888888 332221 11111223 34 789999999999999993
Q ss_pred ------hHHHHHHHHHHHHHHhh-cCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCC
Q 012190 221 ------FEGLVKFVEETVRREHA-SSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (468)
Q Consensus 221 ------~~~~~~dl~~~i~~~~~-~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~ 278 (468)
..+-++|-.++|+.+.. .-.+.+|..+|.|++|...+.+|+..|..+++++...+...
T Consensus 96 G~~~~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 96 GVFDPESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred cccceeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 11123333333333322 23467999999999999999999999998988888776554
|
|
| >KOG1551 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.0029 Score=58.00 Aligned_cols=59 Identities=22% Similarity=0.331 Sum_probs=48.5
Q ss_pred EEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCcc-ccccCcHHHHHHHHhcCcccccCC
Q 012190 382 VLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHT-LLLEEGISLLTIIKGTCKYRRSRK 444 (468)
Q Consensus 382 vLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~-~~~e~p~~~~~~I~~~~F~~r~~~ 444 (468)
+.++.+++|.++|.. ....+.+..|++++..++ .||. .++-+.+.+...|. +-++|..+
T Consensus 309 ~ivv~A~~D~Yipr~-gv~~lQ~~WPg~eVr~~e-gGHVsayl~k~dlfRR~I~--d~L~R~~k 368 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRT-GVRSLQEIWPGCEVRYLE-GGHVSAYLFKQDLFRRAIV--DGLDRLDK 368 (371)
T ss_pred EEEEEecCCcccccc-CcHHHHHhCCCCEEEEee-cCceeeeehhchHHHHHHH--HHHHhhhh
Confidence 678889999999998 789999999999999999 6887 45557777888887 66666554
|
|
| >KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00078 Score=68.97 Aligned_cols=126 Identities=19% Similarity=0.260 Sum_probs=78.6
Q ss_pred HHHHhccCccCCCCCC-ceeeeecCCCCCCCCCCeEEEeCCCCCchhh----HHHhHhhh-cCCeEEEEecCCCCCCC--
Q 012190 148 DYLDAAKEIIKPDGGP-PRWFCPVDCGRPLKGSPTLLFLPGIDGLGLG----LILHHKPL-GKAFEVRCLHIPVYDRT-- 219 (468)
Q Consensus 148 ~y~~~~~~~~~~dg~~-~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~----~~~~~~~L-~~~~~V~~~D~~G~G~S-- 219 (468)
+|-.+...+...||.. |-++-|...-.-..+.|.+|. |+|+-+.. |..--..| ..|+-...-|.||=|+-
T Consensus 438 ~y~~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLy--gYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~ 515 (712)
T KOG2237|consen 438 DYVVERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLY--GYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGE 515 (712)
T ss_pred ceEEEEEEEecCCCCccceEEEEechhhhcCCCceEEE--EecccceeeccccccceeEEEecceEEEEEeeccCccccc
Confidence 3434444556667765 555555332221224675555 44444443 33222233 44555555688987643
Q ss_pred -------------ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 220 -------------PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 220 -------------s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
+++|+....+.+++.--. ...+..+.|.|.||.++.+++..+|+.+.++|+--|..
T Consensus 516 ~WHk~G~lakKqN~f~Dfia~AeyLve~gyt--~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~Vpfm 584 (712)
T KOG2237|consen 516 QWHKDGRLAKKQNSFDDFIACAEYLVENGYT--QPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFM 584 (712)
T ss_pred chhhccchhhhcccHHHHHHHHHHHHHcCCC--CccceeEecccCccchhHHHhccCchHhhhhhhcCcce
Confidence 477777777777765221 24688999999999999999999999999998866543
|
|
| >PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0023 Score=62.19 Aligned_cols=98 Identities=19% Similarity=0.217 Sum_probs=70.6
Q ss_pred CCeEEEeCCCCCchh---hHHHhHhhh-cCCeEEEEecCCCC--C-------------------CC-C------------
Q 012190 179 SPTLLFLPGIDGLGL---GLILHHKPL-GKAFEVRCLHIPVY--D-------------------RT-P------------ 220 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~---~~~~~~~~L-~~~~~V~~~D~~G~--G-------------------~S-s------------ 220 (468)
...||++||.+.+.+ ...++-..| ..|+.++++.+|.- . .+ +
T Consensus 87 ~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 166 (310)
T PF12048_consen 87 QGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEA 166 (310)
T ss_pred ceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccccHh
Confidence 558999999998864 455666777 67899999888761 1 00 0
Q ss_pred ------hHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCC-CceEEEEeCCCC
Q 012190 221 ------FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPT-IDLILILSNPAT 277 (468)
Q Consensus 221 ------~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~-~v~~lVli~p~~ 277 (468)
-+.+...+...+..... .+.++++|+||+.|+..++.+.+..+. .++++|++++..
T Consensus 167 ~~~~~~~~~~~ari~Aa~~~~~~-~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~ 229 (310)
T PF12048_consen 167 EAREAYEERLFARIEAAIAFAQQ-QGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYW 229 (310)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHh-cCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCC
Confidence 12344455555555443 356669999999999999999998764 589999999843
|
This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes. |
| >PLN02633 palmitoyl protein thioesterase family protein | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0071 Score=57.55 Aligned_cols=96 Identities=18% Similarity=0.098 Sum_probs=65.6
Q ss_pred CCeEEEeCCCCCchh--hHHHhHhhhc--CCeEEEEecCCCCCC-C----ChHHHHHHHHHHHHHHhhcCCCCcEEEEEe
Q 012190 179 SPTLLFLPGIDGLGL--GLILHHKPLG--KAFEVRCLHIPVYDR-T----PFEGLVKFVEETVRREHASSPEKPIYLVGD 249 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~--~~~~~~~~L~--~~~~V~~~D~~G~G~-S----s~~~~~~dl~~~i~~~~~~~~~~~i~LvGh 249 (468)
..|+|+.||+|.+.. ....+.+.+. .+..+.++.. |-+. + .+.+.++.+.+.+..... + ..-+++||+
T Consensus 25 ~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i-g~~~~~s~~~~~~~Qve~vce~l~~~~~-l-~~G~naIGf 101 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI-GNGVGDSWLMPLTQQAEIACEKVKQMKE-L-SQGYNIVGR 101 (314)
T ss_pred CCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE-CCCccccceeCHHHHHHHHHHHHhhchh-h-hCcEEEEEE
Confidence 446999999988876 3333444442 2455556554 2222 2 366777777777766322 2 236999999
Q ss_pred ChhHHHHHHHHHhCCC--CceEEEEeCCCC
Q 012190 250 SFGGCLALAVAARNPT--IDLILILSNPAT 277 (468)
Q Consensus 250 S~GG~ia~~~a~~~P~--~v~~lVli~p~~ 277 (468)
|.||.++-.++.+.|+ .|+.+|-+++..
T Consensus 102 SQGGlflRa~ierc~~~p~V~nlISlggph 131 (314)
T PLN02633 102 SQGNLVARGLIEFCDGGPPVYNYISLAGPH 131 (314)
T ss_pred ccchHHHHHHHHHCCCCCCcceEEEecCCC
Confidence 9999999999999987 599999988754
|
|
| >PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00052 Score=55.07 Aligned_cols=60 Identities=17% Similarity=0.209 Sum_probs=49.6
Q ss_pred CceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 379 KAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 379 ~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
..|+|+|.++.|+.+|.+ .++.+.+.+++++++.+++.||..+.....=+.+++. +|+..
T Consensus 34 ~~piL~l~~~~Dp~TP~~-~a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~--~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYE-GARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVD--DYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHH-HHHHHHHHCCCceEEEEeccCcceecCCChHHHHHHH--HHHHc
Confidence 589999999999999999 7999999999999999999999999733344445555 45543
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity |
| >PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2 | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.00087 Score=67.41 Aligned_cols=82 Identities=11% Similarity=0.062 Sum_probs=60.7
Q ss_pred hHHHhHhhhc-CCeE----EE--EecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCC-
Q 012190 194 GLILHHKPLG-KAFE----VR--CLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPT- 265 (468)
Q Consensus 194 ~~~~~~~~L~-~~~~----V~--~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~- 265 (468)
.|..+++.|. .||. +. -+|+|---. ..+++...+...|+...... ++||+||||||||.++..+....+.
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~~-~~~~~~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~fl~~~~~~ 143 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLSPA-ERDEYFTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARYFLQWMPQE 143 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhchh-hHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHHHHHhccch
Confidence 7889998883 3332 22 278874332 34566677777777766555 7899999999999999999988743
Q ss_pred -----CceEEEEeCCCC
Q 012190 266 -----IDLILILSNPAT 277 (468)
Q Consensus 266 -----~v~~lVli~p~~ 277 (468)
.|+++|.++++.
T Consensus 144 ~W~~~~i~~~i~i~~p~ 160 (389)
T PF02450_consen 144 EWKDKYIKRFISIGTPF 160 (389)
T ss_pred hhHHhhhhEEEEeCCCC
Confidence 599999999876
|
3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process |
| >KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.027 Score=57.04 Aligned_cols=108 Identities=19% Similarity=0.145 Sum_probs=71.3
Q ss_pred CCCCCCCCCCeEEEeCCCCCchhhHHHhHhhh-------------------cCCeEEEEecCC-CCCCC----------C
Q 012190 171 DCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-------------------GKAFEVRCLHIP-VYDRT----------P 220 (468)
Q Consensus 171 ~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-------------------~~~~~V~~~D~~-G~G~S----------s 220 (468)
+.-......|.||.|.|.+|++... .+..++ .+..+++-+|.| |-|.| +
T Consensus 65 eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~~ 143 (454)
T KOG1282|consen 65 ESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYKTG 143 (454)
T ss_pred EccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCccccccccEEEEecCCcCCccccCCCCcCcCC
Confidence 3333335689999999999887644 333333 123567788887 66655 2
Q ss_pred hHHHHHHHHHHHHHHhhcCC---CCcEEEEEeChhHHHHHHHHHh----C------CCCceEEEEeCCCCCC
Q 012190 221 FEGLVKFVEETVRREHASSP---EKPIYLVGDSFGGCLALAVAAR----N------PTIDLILILSNPATSF 279 (468)
Q Consensus 221 ~~~~~~dl~~~i~~~~~~~~---~~~i~LvGhS~GG~ia~~~a~~----~------P~~v~~lVli~p~~~~ 279 (468)
-+..++|+..++.....++| .++++|.|.|++|...-.+|.+ + +-.++|+++-+|....
T Consensus 144 D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~ 215 (454)
T KOG1282|consen 144 DDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLTDP 215 (454)
T ss_pred cHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCcccCc
Confidence 34556666666665554444 6899999999999776666643 2 1357889988887643
|
|
| >PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0063 Score=60.01 Aligned_cols=36 Identities=28% Similarity=0.248 Sum_probs=31.1
Q ss_pred CcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 242 KPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 242 ~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
.|++++|+|.||.+|..+|.-.|..+++++=-+++.
T Consensus 184 lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~ 219 (403)
T PF11144_consen 184 LPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYA 219 (403)
T ss_pred CcEEEEecCcHHHHHHHHHhhCccceeEEEecCccc
Confidence 589999999999999999999999998887655443
|
|
| >KOG3101 consensus Esterase D [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0023 Score=56.73 Aligned_cols=107 Identities=16% Similarity=0.196 Sum_probs=72.8
Q ss_pred CCCeEEEeCCCCCchhhHHH--hHhhh--cCCeEEEEecC--CCCC-----CC-------------C----------hHH
Q 012190 178 GSPTLLFLPGIDGLGLGLIL--HHKPL--GKAFEVRCLHI--PVYD-----RT-------------P----------FEG 223 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~--~~~~L--~~~~~V~~~D~--~G~G-----~S-------------s----------~~~ 223 (468)
.-|++.++-|+.+....|.. -.+.. ..++.|+.+|- ||.. +| + .+.
T Consensus 43 ~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdY 122 (283)
T KOG3101|consen 43 RCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDY 122 (283)
T ss_pred cCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHH
Confidence 36899999999999886643 22222 44688888884 4431 12 1 344
Q ss_pred HHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCc
Q 012190 224 LVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQL 284 (468)
Q Consensus 224 ~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~ 284 (468)
.++.+-+++..-.......++.+.||||||.=|+-.+.++|.+.+++-..+|...+..-+|
T Consensus 123 v~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~~cpW 183 (283)
T KOG3101|consen 123 VVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPINCPW 183 (283)
T ss_pred HHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCcccCcc
Confidence 4555555555433333455789999999999999999999999999888887654443333
|
|
| >cd00741 Lipase Lipase | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.001 Score=57.60 Aligned_cols=56 Identities=21% Similarity=0.232 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCC----CceEEEEeCCCC
Q 012190 222 EGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPT----IDLILILSNPAT 277 (468)
Q Consensus 222 ~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~----~v~~lVli~p~~ 277 (468)
..+.+.+...++......+..+++++|||+||.+|..++...+. ....++..+++.
T Consensus 8 ~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 8 RSLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 34455566666655544577899999999999999998887654 456677766644
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.082 Score=53.84 Aligned_cols=103 Identities=26% Similarity=0.268 Sum_probs=66.3
Q ss_pred CCCCCeEEEeCCCCCchhhHHH---hHh-------------hh-------cCCeEEEEecCC-CCCCCC---------hH
Q 012190 176 LKGSPTLLFLPGIDGLGLGLIL---HHK-------------PL-------GKAFEVRCLHIP-VYDRTP---------FE 222 (468)
Q Consensus 176 ~~~~p~lV~lHG~~~s~~~~~~---~~~-------------~L-------~~~~~V~~~D~~-G~G~Ss---------~~ 222 (468)
....|+|+.+.|.+|++..+.. ..+ .| .+..+++-+|.| |.|.|. -+
T Consensus 63 ~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~d~ 142 (433)
T PLN03016 63 PKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDKTGDI 142 (433)
T ss_pred cccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCccCCH
Confidence 3568999999999888773321 111 11 234788889954 777661 11
Q ss_pred HHHHHHHHHHHHHhhcC---CCCcEEEEEeChhHHHHHHHHHh----C------CCCceEEEEeCCCCC
Q 012190 223 GLVKFVEETVRREHASS---PEKPIYLVGDSFGGCLALAVAAR----N------PTIDLILILSNPATS 278 (468)
Q Consensus 223 ~~~~dl~~~i~~~~~~~---~~~~i~LvGhS~GG~ia~~~a~~----~------P~~v~~lVli~p~~~ 278 (468)
+.++++.++++...... ...+++|.|.|+||..+-.+|.. + +-.++|+++-+|...
T Consensus 143 ~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~ 211 (433)
T PLN03016 143 SEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTY 211 (433)
T ss_pred HHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCcC
Confidence 23355665555544333 35789999999999877666643 2 225789999888653
|
|
| >PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0022 Score=63.11 Aligned_cols=60 Identities=13% Similarity=0.300 Sum_probs=49.9
Q ss_pred ccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC-CcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 376 HAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ-NCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 376 ~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~-~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
.++++|.++|.|..|.+..++ ....+...+| .+.+..+||++|.+.. ..+.+.|. .|+++
T Consensus 259 ~rL~~PK~ii~atgDeFf~pD-~~~~y~d~L~G~K~lr~vPN~~H~~~~---~~~~~~l~--~f~~~ 319 (367)
T PF10142_consen 259 DRLTMPKYIINATGDEFFVPD-SSNFYYDKLPGEKYLRYVPNAGHSLIG---SDVVQSLR--AFYNR 319 (367)
T ss_pred HhcCccEEEEecCCCceeccC-chHHHHhhCCCCeeEEeCCCCCcccch---HHHHHHHH--HHHHH
Confidence 456899999999999999999 6999999998 5678899999999876 55666666 46655
|
Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily. |
| >KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0021 Score=62.61 Aligned_cols=97 Identities=18% Similarity=0.149 Sum_probs=73.9
Q ss_pred CeEEEeCCCCCchhhHHH---hHhhhcC--CeEEEEecCCCCCCC-----------------ChHHHHHHHHHHHHHHhh
Q 012190 180 PTLLFLPGIDGLGLGLIL---HHKPLGK--AFEVRCLHIPVYDRT-----------------PFEGLVKFVEETVRREHA 237 (468)
Q Consensus 180 p~lV~lHG~~~s~~~~~~---~~~~L~~--~~~V~~~D~~G~G~S-----------------s~~~~~~dl~~~i~~~~~ 237 (468)
.+|+|--|.-|+.+.|.. ++-.++. +--++-.++|-+|+| +.++...|..+++..++.
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~ 160 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKR 160 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhh
Confidence 468888999888886654 2333322 346777899999988 356677777888887775
Q ss_pred cCC--CCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCC
Q 012190 238 SSP--EKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPA 276 (468)
Q Consensus 238 ~~~--~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~ 276 (468)
... ..+|+.+|-|+||++|..+=.+||+.+.|.+..+.+
T Consensus 161 ~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAP 201 (492)
T KOG2183|consen 161 DLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAP 201 (492)
T ss_pred ccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCc
Confidence 532 568999999999999999999999999988775544
|
|
| >cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0014 Score=68.45 Aligned_cols=98 Identities=11% Similarity=0.053 Sum_probs=58.2
Q ss_pred CCCCeEEEeCCCCCc---hhh--HHHhHhhhcCCeEEEEecCC-C---CCCC---------ChHHHHHH---HHHHHHHH
Q 012190 177 KGSPTLLFLPGIDGL---GLG--LILHHKPLGKAFEVRCLHIP-V---YDRT---------PFEGLVKF---VEETVRRE 235 (468)
Q Consensus 177 ~~~p~lV~lHG~~~s---~~~--~~~~~~~L~~~~~V~~~D~~-G---~G~S---------s~~~~~~d---l~~~i~~~ 235 (468)
++.|+||++||.+.. ... ...++.... ++-|+++++| | +..+ .+.|.... +.+-+...
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~~~~~~~~~~~~~-~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~f 171 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGSLYPGDGLAREGD-NVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAF 171 (493)
T ss_pred CCCCEEEEEcCCccccCCCCCCChHHHHhcCC-CEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHh
Confidence 357999999996322 111 222222222 4889999998 2 3222 12333222 22223322
Q ss_pred hhcCCCCcEEEEEeChhHHHHHHHHHh--CCCCceEEEEeCCCC
Q 012190 236 HASSPEKPIYLVGDSFGGCLALAVAAR--NPTIDLILILSNPAT 277 (468)
Q Consensus 236 ~~~~~~~~i~LvGhS~GG~ia~~~a~~--~P~~v~~lVli~p~~ 277 (468)
+ ....+|.|+|+|.||..+..++.. .+..++++|+.++..
T Consensus 172 g--gd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 172 G--GDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSA 213 (493)
T ss_pred C--CCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCc
Confidence 2 235689999999999998877765 345788889887655
|
) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| >COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.02 Score=54.61 Aligned_cols=51 Identities=18% Similarity=0.291 Sum_probs=41.0
Q ss_pred ccCC-ceEEEEEeCCCCCCCcHHHHHHHHHhCCC--cEEEEeCCCCccccccCcH
Q 012190 376 HAVK-AEVLVLASGKDNMLPSEDEAKRLNNSLQN--CIVRNFKDNGHTLLLEEGI 427 (468)
Q Consensus 376 ~~i~-~PvLlI~G~~D~~v~~~~~~~~l~~~l~~--~~~~~i~~aGH~~~~e~p~ 427 (468)
..+. +|+|+++|.+|..+|.. ....+.+.... .+...+++++|......+.
T Consensus 228 ~~i~~~P~l~~~G~~D~~vp~~-~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~ 281 (299)
T COG1073 228 EKISPRPVLLVHGERDEVVPLR-DAEDLYEAARERPKKLLFVPGGGHIDLYDNPP 281 (299)
T ss_pred hhcCCcceEEEecCCCcccchh-hhHHHHhhhccCCceEEEecCCccccccCccH
Confidence 3444 79999999999999999 68888777655 5788889999998875544
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.036 Score=60.81 Aligned_cols=88 Identities=31% Similarity=0.519 Sum_probs=65.0
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC--------ChHHHHHHHHHHHHHHhhcCCCCcEEEEEe
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSPEKPIYLVGD 249 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S--------s~~~~~~dl~~~i~~~~~~~~~~~i~LvGh 249 (468)
..|++.|+|..-|....+..++..| ..|.||.- ++++.++....-+++ -.|..|..|+|+
T Consensus 2122 e~~~~Ffv~pIEG~tt~l~~la~rl---------e~PaYglQ~T~~vP~dSies~A~~yirqirk---vQP~GPYrl~GY 2189 (2376)
T KOG1202|consen 2122 EEPPLFFVHPIEGFTTALESLASRL---------EIPAYGLQCTEAVPLDSIESLAAYYIRQIRK---VQPEGPYRLAGY 2189 (2376)
T ss_pred cCCceEEEeccccchHHHHHHHhhc---------CCcchhhhccccCCcchHHHHHHHHHHHHHh---cCCCCCeeeecc
Confidence 5788999999999999888888887 34555532 466666655544444 346679999999
Q ss_pred ChhHHHHHHHHHhCC--CCceEEEEeCCCC
Q 012190 250 SFGGCLALAVAARNP--TIDLILILSNPAT 277 (468)
Q Consensus 250 S~GG~ia~~~a~~~P--~~v~~lVli~p~~ 277 (468)
|+|++++..+|.... +-...+|+++++.
T Consensus 2190 SyG~~l~f~ma~~Lqe~~~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2190 SYGACLAFEMASQLQEQQSPAPLILLDGSP 2219 (2376)
T ss_pred chhHHHHHHHHHHHHhhcCCCcEEEecCch
Confidence 999999999986532 3345588888765
|
|
| >PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.031 Score=49.31 Aligned_cols=106 Identities=14% Similarity=0.148 Sum_probs=68.2
Q ss_pred CCCCCCCCCeEEEeCCCCCchhhHHH--------hH----hh---hcC--CeEEEE---ecCCCCCCC------ChHHHH
Q 012190 172 CGRPLKGSPTLLFLPGIDGLGLGLIL--------HH----KP---LGK--AFEVRC---LHIPVYDRT------PFEGLV 225 (468)
Q Consensus 172 ~g~~~~~~p~lV~lHG~~~s~~~~~~--------~~----~~---L~~--~~~V~~---~D~~G~G~S------s~~~~~ 225 (468)
.|++.....+.++++|.+.+...+.. +. .. ... .-.+++ ||-|.-+.. --+.-+
T Consensus 12 ~GD~d~A~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~A~~ga 91 (177)
T PF06259_consen 12 VGDPDTADHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGYARAGA 91 (177)
T ss_pred ECCcCCcCeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchHHHHHH
Confidence 34443446688999999877652211 11 11 112 233333 555621111 145667
Q ss_pred HHHHHHHHHHhhcC-CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 226 KFVEETVRREHASS-PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 226 ~dl~~~i~~~~~~~-~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
.++..+++.+.... +..++.++|||+|+.++-..+...+..++.+|+++++.
T Consensus 92 ~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG 144 (177)
T PF06259_consen 92 PRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPG 144 (177)
T ss_pred HHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCC
Confidence 77788887777655 56789999999999999887777677899999988754
|
Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates. |
| >PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.03 Score=51.63 Aligned_cols=95 Identities=18% Similarity=0.163 Sum_probs=56.3
Q ss_pred CeEEEeCCCC--Cchh-hHHHhHhhh-cCCeEEEEecC-CCCCCCC-hHHHHHHHHHHHHHHhhcC----CCCcEEEEEe
Q 012190 180 PTLLFLPGID--GLGL-GLILHHKPL-GKAFEVRCLHI-PVYDRTP-FEGLVKFVEETVRREHASS----PEKPIYLVGD 249 (468)
Q Consensus 180 p~lV~lHG~~--~s~~-~~~~~~~~L-~~~~~V~~~D~-~G~G~Ss-~~~~~~dl~~~i~~~~~~~----~~~~i~LvGh 249 (468)
.+|=|+-|.. .... .|..+.+.| .+||.|++.-+ .|+.--. ..+..+.....++.+.... ..-|++-+||
T Consensus 18 gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~tfDH~~~A~~~~~~f~~~~~~L~~~~~~~~~~lP~~~vGH 97 (250)
T PF07082_consen 18 GVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVVTFDHQAIAREVWERFERCLRALQKRGGLDPAYLPVYGVGH 97 (250)
T ss_pred EEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCeeeeec
Confidence 3556666642 2222 788889999 67899999665 2332111 1112222222233222211 1247889999
Q ss_pred ChhHHHHHHHHHhCCCCceEEEEeC
Q 012190 250 SFGGCLALAVAARNPTIDLILILSN 274 (468)
Q Consensus 250 S~GG~ia~~~a~~~P~~v~~lVli~ 274 (468)
|||+-+-+.+...++..-.+-|+++
T Consensus 98 SlGcklhlLi~s~~~~~r~gniliS 122 (250)
T PF07082_consen 98 SLGCKLHLLIGSLFDVERAGNILIS 122 (250)
T ss_pred ccchHHHHHHhhhccCcccceEEEe
Confidence 9999999888888765556667754
|
Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis. |
| >KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.014 Score=53.88 Aligned_cols=95 Identities=20% Similarity=0.135 Sum_probs=67.3
Q ss_pred CeEEEeCCCCCchhh--HHHhHhhhc--CCeEEEEecCCCCC--CC---ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeC
Q 012190 180 PTLLFLPGIDGLGLG--LILHHKPLG--KAFEVRCLHIPVYD--RT---PFEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (468)
Q Consensus 180 p~lV~lHG~~~s~~~--~~~~~~~L~--~~~~V~~~D~~G~G--~S---s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS 250 (468)
-++|++||++++... +..+.+.+. .+..|+|+|. |-| .| ...+.++.+.+.++..... .+-++++|.|
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g~~~s~l~pl~~Qv~~~ce~v~~m~~l--sqGynivg~S 100 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDGIKDSSLMPLWEQVDVACEKVKQMPEL--SQGYNIVGYS 100 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCCcchhhhccHHHHHHHHHHHHhcchhc--cCceEEEEEc
Confidence 368899999988875 666666663 3678888885 444 44 3567777777777743322 4578999999
Q ss_pred hhHHHHHHHHHhCC-CCceEEEEeCCCC
Q 012190 251 FGGCLALAVAARNP-TIDLILILSNPAT 277 (468)
Q Consensus 251 ~GG~ia~~~a~~~P-~~v~~lVli~p~~ 277 (468)
.||.++-.++..-| ..|..+|-++++.
T Consensus 101 QGglv~Raliq~cd~ppV~n~ISL~gPh 128 (296)
T KOG2541|consen 101 QGGLVARALIQFCDNPPVKNFISLGGPH 128 (296)
T ss_pred cccHHHHHHHHhCCCCCcceeEeccCCc
Confidence 99999998887754 3567777766543
|
|
| >cd00519 Lipase_3 Lipase (class 3) | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.0065 Score=56.39 Aligned_cols=56 Identities=21% Similarity=0.317 Sum_probs=37.8
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhC-----CCCceEEEEeCCC
Q 012190 221 FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARN-----PTIDLILILSNPA 276 (468)
Q Consensus 221 ~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~-----P~~v~~lVli~p~ 276 (468)
+..+.+++...++....+.+..++++.||||||++|..++... +..+..+..-+|.
T Consensus 107 ~~~~~~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~ 167 (229)
T cd00519 107 YKSLYNQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPR 167 (229)
T ss_pred HHHHHHHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCC
Confidence 4445555555555555556788999999999999999888753 3345555554443
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides [] | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.0061 Score=51.63 Aligned_cols=37 Identities=27% Similarity=0.422 Sum_probs=26.5
Q ss_pred HHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHh
Q 012190 226 KFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR 262 (468)
Q Consensus 226 ~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~ 262 (468)
+.+.+.++.+....+..++++.|||+||++|..++..
T Consensus 48 ~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 48 DQILDALKELVEKYPDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHh
Confidence 3444444444434666799999999999999988866
|
Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A .... |
| >KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.038 Score=55.58 Aligned_cols=98 Identities=16% Similarity=0.196 Sum_probs=76.5
Q ss_pred CCCeEEEeCCCCCchhhH--------HHhHhhhcCCeEEEEecCCCCCCC--------------ChHHHHHHHHHHHHHH
Q 012190 178 GSPTLLFLPGIDGLGLGL--------ILHHKPLGKAFEVRCLHIPVYDRT--------------PFEGLVKFVEETVRRE 235 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~--------~~~~~~L~~~~~V~~~D~~G~G~S--------------s~~~~~~dl~~~i~~~ 235 (468)
++|..|+|-|=+.-...| ...++++ +-.|+.+++|-+|.| +.+....|+.++|+++
T Consensus 85 ~gPiFLmIGGEgp~~~~wv~~~~~~~~~~Akkf--gA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~ 162 (514)
T KOG2182|consen 85 GGPIFLMIGGEGPESDKWVGNENLTWLQWAKKF--GATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAM 162 (514)
T ss_pred CCceEEEEcCCCCCCCCccccCcchHHHHHHHh--CCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHH
Confidence 577788887766555333 3334443 467888999999977 3677889999999998
Q ss_pred hhcCC---CCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 236 HASSP---EKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 236 ~~~~~---~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
..+.+ ..|.+.+|-|+-|.++..+=..+||.+.|.|..+.+.
T Consensus 163 n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv 207 (514)
T KOG2182|consen 163 NAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPV 207 (514)
T ss_pred HhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccce
Confidence 87753 2389999999999999999999999999988876654
|
|
| >COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.035 Score=51.73 Aligned_cols=37 Identities=22% Similarity=0.250 Sum_probs=33.6
Q ss_pred CCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 241 EKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 241 ~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
..+..++|||+||.+++.....+|+.+...++++|..
T Consensus 136 ~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSl 172 (264)
T COG2819 136 SERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSL 172 (264)
T ss_pred cccceeeeecchhHHHHHHHhcCcchhceeeeecchh
Confidence 4568899999999999999999999999999999854
|
|
| >PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids [] | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.026 Score=50.19 Aligned_cols=85 Identities=14% Similarity=0.076 Sum_probs=54.5
Q ss_pred hhHHHhHhhh--cCCeEEEEecCCCCCCC-----ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHh---
Q 012190 193 LGLILHHKPL--GKAFEVRCLHIPVYDRT-----PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR--- 262 (468)
Q Consensus 193 ~~~~~~~~~L--~~~~~V~~~D~~G~G~S-----s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~--- 262 (468)
..+...++.. .....+..+++|--... +...=+..+...++......|+.+++|+|+|.||.++..++..
T Consensus 25 ~~~~~~l~~~~g~~~~~~~~V~YpA~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l 104 (179)
T PF01083_consen 25 PPFADALQAQPGGTSVAVQGVEYPASLGPNSYGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGL 104 (179)
T ss_dssp HHHHHHHHHHCTTCEEEEEE--S---SCGGSCHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHhhcCCCeeEEEecCCCCCCCcccccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccC
Confidence 3444434333 34577877888865433 3445556666666666666888999999999999999988877
Q ss_pred ---CCCCceEEEEeCCCC
Q 012190 263 ---NPTIDLILILSNPAT 277 (468)
Q Consensus 263 ---~P~~v~~lVli~p~~ 277 (468)
..++|.++++++-+.
T Consensus 105 ~~~~~~~I~avvlfGdP~ 122 (179)
T PF01083_consen 105 PPDVADRIAAVVLFGDPR 122 (179)
T ss_dssp SHHHHHHEEEEEEES-TT
T ss_pred ChhhhhhEEEEEEecCCc
Confidence 235788988876544
|
Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A .... |
| >KOG3967 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.067 Score=47.68 Aligned_cols=101 Identities=16% Similarity=0.277 Sum_probs=61.7
Q ss_pred CCeEEEeCCCCCchh-hHHHh---------------H-hhhcCCeEEEEecCCC---CCCC---C---hHHHHHHHHHHH
Q 012190 179 SPTLLFLPGIDGLGL-GLILH---------------H-KPLGKAFEVRCLHIPV---YDRT---P---FEGLVKFVEETV 232 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~-~~~~~---------------~-~~L~~~~~V~~~D~~G---~G~S---s---~~~~~~dl~~~i 232 (468)
...+|++||.|-... .|.+- + ++.+.||.|+....-- +-.+ + +..-++.+..+.
T Consensus 101 ~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yvw 180 (297)
T KOG3967|consen 101 QKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYVW 180 (297)
T ss_pred cceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHHH
Confidence 448999999886654 45441 1 2335689998876421 1000 0 111122222333
Q ss_pred HHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCC--CceEEEEeCCCCCC
Q 012190 233 RREHASSPEKPIYLVGDSFGGCLALAVAARNPT--IDLILILSNPATSF 279 (468)
Q Consensus 233 ~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~--~v~~lVli~p~~~~ 279 (468)
...-.....+.++++.||+||...+.+..++|+ .|.++.+-+++...
T Consensus 181 ~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~~~ 229 (297)
T KOG3967|consen 181 KNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAMGS 229 (297)
T ss_pred HHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccccC
Confidence 332222345689999999999999999999884 57777777766443
|
|
| >KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.018 Score=57.59 Aligned_cols=84 Identities=12% Similarity=0.100 Sum_probs=60.0
Q ss_pred hhHHHhHhhh-cCCeE----E--EEecCCC-CCCC-ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhC
Q 012190 193 LGLILHHKPL-GKAFE----V--RCLHIPV-YDRT-PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARN 263 (468)
Q Consensus 193 ~~~~~~~~~L-~~~~~----V--~~~D~~G-~G~S-s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~ 263 (468)
..|..+++.| .-||. + ..+|+|- +-.+ ..+++...+...++......+.+||+||+|||||.+.+.+...+
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~ 203 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRLSYHNSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWV 203 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhhccCChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcc
Confidence 5788888888 44554 3 3488874 2222 35666677777777766667779999999999999999999888
Q ss_pred CC--------CceEEEEeCCC
Q 012190 264 PT--------IDLILILSNPA 276 (468)
Q Consensus 264 P~--------~v~~lVli~p~ 276 (468)
++ .|++++-++++
T Consensus 204 ~~~~~~W~~k~I~sfvnig~p 224 (473)
T KOG2369|consen 204 EAEGPAWCDKYIKSFVNIGAP 224 (473)
T ss_pred cccchhHHHHHHHHHHccCch
Confidence 76 35555555443
|
|
| >COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.042 Score=56.41 Aligned_cols=113 Identities=19% Similarity=0.255 Sum_probs=72.6
Q ss_pred cCCCCCC-ceeeeecCCCCCCCCCCeEEEeCCCCCchh----hHHHhH-hhhcCCeEEEEecCCCCCCC-----------
Q 012190 157 IKPDGGP-PRWFCPVDCGRPLKGSPTLLFLPGIDGLGL----GLILHH-KPLGKAFEVRCLHIPVYDRT----------- 219 (468)
Q Consensus 157 ~~~dg~~-~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~----~~~~~~-~~L~~~~~V~~~D~~G~G~S----------- 219 (468)
...||.. |.++.. .|-..+++|++|+ |+||-.- .|.+.. ..|.+|...+.-.+||=|+-
T Consensus 400 tSkDGT~IPYFiv~--K~~~~d~~pTll~--aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~ 475 (648)
T COG1505 400 TSKDGTRIPYFIVR--KGAKKDENPTLLY--AYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKE 475 (648)
T ss_pred EcCCCccccEEEEe--cCCcCCCCceEEE--eccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhh
Confidence 4557765 444433 3322235777665 4444332 344444 33477877777899997754
Q ss_pred ----ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCC
Q 012190 220 ----PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNP 275 (468)
Q Consensus 220 ----s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p 275 (468)
-++|+..-.+++++.--. ..+++.+.|-|-||.+.-.+..++||.+.++|+--|
T Consensus 476 nrq~vfdDf~AVaedLi~rgit--spe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evP 533 (648)
T COG1505 476 NKQNVFDDFIAVAEDLIKRGIT--SPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVP 533 (648)
T ss_pred cchhhhHHHHHHHHHHHHhCCC--CHHHhhhccCCCCceEEEeeeccChhhhCceeeccc
Confidence 256666666666654211 134788999999999999889999999988887655
|
|
| >COG0627 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.035 Score=53.84 Aligned_cols=38 Identities=24% Similarity=0.121 Sum_probs=34.2
Q ss_pred cEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCC
Q 012190 243 PIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFG 280 (468)
Q Consensus 243 ~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~ 280 (468)
...++||||||.=|+.+|++||+++..+...+|...+.
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred CceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 67899999999999999999999999999988877554
|
|
| >PLN02517 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.016 Score=59.77 Aligned_cols=84 Identities=10% Similarity=-0.024 Sum_probs=56.8
Q ss_pred hHHHhHhhh-cCCeE-----EEEecCCCCCCC--ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCC-
Q 012190 194 GLILHHKPL-GKAFE-----VRCLHIPVYDRT--PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNP- 264 (468)
Q Consensus 194 ~~~~~~~~L-~~~~~-----V~~~D~~G~G~S--s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P- 264 (468)
.|..+++.| ..+|. ...+|+|=-... .-+++...+...|+.......++||+|+||||||.+++.+.....
T Consensus 157 vw~kLIe~L~~iGY~~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv~~ 236 (642)
T PLN02517 157 VWAVLIANLARIGYEEKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWVEA 236 (642)
T ss_pred eHHHHHHHHHHcCCCCCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhccc
Confidence 568888888 44453 333676632211 235566667777776655555789999999999999998876321
Q ss_pred --------------CCceEEEEeCCCC
Q 012190 265 --------------TIDLILILSNPAT 277 (468)
Q Consensus 265 --------------~~v~~lVli~p~~ 277 (468)
..|++.|.++++.
T Consensus 237 ~~~~gG~gG~~W~dKyI~s~I~Iagp~ 263 (642)
T PLN02517 237 PAPMGGGGGPGWCAKHIKAVMNIGGPF 263 (642)
T ss_pred cccccCCcchHHHHHHHHHheeccccc
Confidence 2478889988865
|
|
| >PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.038 Score=50.98 Aligned_cols=82 Identities=17% Similarity=0.111 Sum_probs=48.8
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHH
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALA 258 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~ 258 (468)
+..+|-.=|-..+...|..-+.- +++.. .... +...+.++......+. ++++.|||.||.+|..
T Consensus 37 ~~~~vaFRGTd~t~~~W~ed~~~-------------~~~~~-~~~q-~~A~~yl~~~~~~~~~-~i~v~GHSkGGnLA~y 100 (224)
T PF11187_consen 37 GEYVVAFRGTDDTLVDWKEDFNM-------------SFQDE-TPQQ-KSALAYLKKIAKKYPG-KIYVTGHSKGGNLAQY 100 (224)
T ss_pred CeEEEEEECCCCchhhHHHHHHh-------------hcCCC-CHHH-HHHHHHHHHHHHhCCC-CEEEEEechhhHHHHH
Confidence 44677777887776677653311 11110 1111 2222333333333444 5999999999999998
Q ss_pred HHHhC----CCCceEEEEeCCC
Q 012190 259 VAARN----PTIDLILILSNPA 276 (468)
Q Consensus 259 ~a~~~----P~~v~~lVli~p~ 276 (468)
.|+.. .++|.++...+++
T Consensus 101 aa~~~~~~~~~rI~~vy~fDgP 122 (224)
T PF11187_consen 101 AAANCDDEIQDRISKVYSFDGP 122 (224)
T ss_pred HHHHccHHHhhheeEEEEeeCC
Confidence 88773 3578888887764
|
|
| >COG2272 PnbA Carboxylesterase type B [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.046 Score=55.10 Aligned_cols=101 Identities=18% Similarity=0.222 Sum_probs=60.7
Q ss_pred CCCCCeEEEeCCCC---CchhhHHHhHhhh-cCC-eEEEEecCC----C------CC--CC-----ChHHH---HHHHHH
Q 012190 176 LKGSPTLLFLPGID---GLGLGLILHHKPL-GKA-FEVRCLHIP----V------YD--RT-----PFEGL---VKFVEE 230 (468)
Q Consensus 176 ~~~~p~lV~lHG~~---~s~~~~~~~~~~L-~~~-~~V~~~D~~----G------~G--~S-----s~~~~---~~dl~~ 230 (468)
.++.|++|++||.+ |++.....--..| .++ +-|+++++| | .+ +. -+.|+ .+.+.+
T Consensus 91 a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~ 170 (491)
T COG2272 91 AEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVRD 170 (491)
T ss_pred CCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHHH
Confidence 34679999999973 3333322334556 344 777777775 1 12 11 12232 344445
Q ss_pred HHHHHhhcCCCCcEEEEEeChhHHHHHHHHHh--CCCCceEEEEeCCCCC
Q 012190 231 TVRREHASSPEKPIYLVGDSFGGCLALAVAAR--NPTIDLILILSNPATS 278 (468)
Q Consensus 231 ~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~--~P~~v~~lVli~p~~~ 278 (468)
-|++.+- ....|.|+|+|.||+.++.+.+- ....+.++|+.++...
T Consensus 171 NIe~FGG--Dp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 171 NIEAFGG--DPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHhCC--CccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 5555442 24589999999999887766553 2246778888887765
|
|
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.13 Score=52.48 Aligned_cols=114 Identities=24% Similarity=0.332 Sum_probs=73.0
Q ss_pred eeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhH---h-------------hh-------cCCeEEEEecCC-CCCCC--
Q 012190 166 WFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHH---K-------------PL-------GKAFEVRCLHIP-VYDRT-- 219 (468)
Q Consensus 166 ~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~---~-------------~L-------~~~~~V~~~D~~-G~G~S-- 219 (468)
|+.+.+......+.|+++.+.|.+|++..+..+. + .| .+..+++-+|.| |.|.|
T Consensus 55 f~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~ 134 (437)
T PLN02209 55 FYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYS 134 (437)
T ss_pred EEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEEEecCCCCCCccCC
Confidence 3444443333356899999999988887543211 0 11 234678889965 67765
Q ss_pred -------ChHHHHHHHHHHHHHHhhcCC---CCcEEEEEeChhHHHHHHHHHh----C------CCCceEEEEeCCCCCC
Q 012190 220 -------PFEGLVKFVEETVRREHASSP---EKPIYLVGDSFGGCLALAVAAR----N------PTIDLILILSNPATSF 279 (468)
Q Consensus 220 -------s~~~~~~dl~~~i~~~~~~~~---~~~i~LvGhS~GG~ia~~~a~~----~------P~~v~~lVli~p~~~~ 279 (468)
+-++.++++.++++......+ ..+++|.|.|+||..+-.+|.. + +-.++|+++.++....
T Consensus 135 ~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~ 214 (437)
T PLN02209 135 KTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHI 214 (437)
T ss_pred CCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccCh
Confidence 123445677777666554443 4689999999999877666643 2 1256799998886643
|
|
| >COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.049 Score=53.29 Aligned_cols=87 Identities=18% Similarity=0.098 Sum_probs=69.8
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCC--CChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHH
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDR--TPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCL 255 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~--Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~i 255 (468)
...-||..|=||-...=+....+| ..++.|+.+|-.-|=. -+.+..++|+..+++....+.+.+++.|+|+|+|+-+
T Consensus 260 d~~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~rtPe~~a~Dl~r~i~~y~~~w~~~~~~liGySfGADv 339 (456)
T COG3946 260 DTVAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSERTPEQIAADLSRLIRFYARRWGAKRVLLIGYSFGADV 339 (456)
T ss_pred ceEEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhccCCHHHHHHHHHHHHHHHHHhhCcceEEEEeecccchh
Confidence 446688888888777777888899 6789999999544332 3789999999999999888788899999999999988
Q ss_pred HHHHHHhCCC
Q 012190 256 ALAVAARNPT 265 (468)
Q Consensus 256 a~~~a~~~P~ 265 (468)
.-..-.+.|.
T Consensus 340 lP~~~n~L~~ 349 (456)
T COG3946 340 LPFAYNRLPP 349 (456)
T ss_pred hHHHHHhCCH
Confidence 7655555553
|
|
| >PLN02162 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.067 Score=53.84 Aligned_cols=33 Identities=30% Similarity=0.425 Sum_probs=24.1
Q ss_pred HHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHH
Q 012190 229 EETVRREHASSPEKPIYLVGDSFGGCLALAVAA 261 (468)
Q Consensus 229 ~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~ 261 (468)
.+.++....+.+..++++.|||+||++|+.+|+
T Consensus 265 ~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 265 RQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 333333333467779999999999999998765
|
|
| >PLN02454 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.091 Score=52.41 Aligned_cols=39 Identities=21% Similarity=0.212 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHhhcCCCCc--EEEEEeChhHHHHHHHHHh
Q 012190 224 LVKFVEETVRREHASSPEKP--IYLVGDSFGGCLALAVAAR 262 (468)
Q Consensus 224 ~~~dl~~~i~~~~~~~~~~~--i~LvGhS~GG~ia~~~a~~ 262 (468)
..+++...++.+....+..+ |++.||||||++|+..|..
T Consensus 208 ~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 208 ARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 44455555555544455444 9999999999999988854
|
|
| >PLN00413 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.63 E-value=0.099 Score=52.79 Aligned_cols=34 Identities=29% Similarity=0.605 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHH
Q 012190 224 LVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAA 261 (468)
Q Consensus 224 ~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~ 261 (468)
+.+.+.++++. .+..++++.|||+||++|..+|+
T Consensus 270 i~~~Lk~ll~~----~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 270 ILRHLKEIFDQ----NPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHH----CCCCeEEEEecCHHHHHHHHHHH
Confidence 34444444443 67789999999999999998875
|
|
| >PLN02310 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.43 E-value=0.11 Score=51.74 Aligned_cols=41 Identities=29% Similarity=0.357 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHh
Q 012190 222 EGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR 262 (468)
Q Consensus 222 ~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~ 262 (468)
+++.+.+..+++.........+|.+.|||+||++|+..|..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 34445555555543222234589999999999999988743
|
|
| >PLN02571 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.03 E-value=0.083 Score=52.72 Aligned_cols=37 Identities=24% Similarity=0.330 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHHhhcCCC--CcEEEEEeChhHHHHHHHHHh
Q 012190 222 EGLVKFVEETVRREHASSPE--KPIYLVGDSFGGCLALAVAAR 262 (468)
Q Consensus 222 ~~~~~dl~~~i~~~~~~~~~--~~i~LvGhS~GG~ia~~~a~~ 262 (468)
+++.+++..+++. .+. .+|++.||||||++|+..|..
T Consensus 208 ~qvl~eV~~L~~~----y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEK----YKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHh----cCcccccEEEeccchHHHHHHHHHHH
Confidence 4455555555554 333 378999999999999988864
|
|
| >PLN02934 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=93.82 E-value=0.095 Score=53.34 Aligned_cols=34 Identities=18% Similarity=0.373 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHH
Q 012190 224 LVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAA 261 (468)
Q Consensus 224 ~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~ 261 (468)
..+.+.++++ ..+..++++.|||+||++|..+|.
T Consensus 307 v~~~lk~ll~----~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 307 VRSKLKSLLK----EHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHH----HCCCCeEEEeccccHHHHHHHHHH
Confidence 3444444444 477889999999999999998874
|
|
| >PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein | Back alignment and domain information |
|---|
Probab=93.66 E-value=0.06 Score=43.69 Aligned_cols=65 Identities=18% Similarity=0.203 Sum_probs=35.9
Q ss_pred hhHHHHhhcCCCcchHHHHHHhccCcc-CCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHh
Q 012190 131 EELEVLWDDGYGTDSVKDYLDAAKEII-KPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILH 198 (468)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~y~~~~~~~~-~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~ 198 (468)
+.+-..|.++|.-...++.+..-..+. .-+|...-+++-...+ ++..+|||+||++||-..|.++
T Consensus 46 ~~L~~yW~~~fDWr~~E~~lN~~phf~t~I~g~~iHFih~rs~~---~~aiPLll~HGWPgSf~Ef~~v 111 (112)
T PF06441_consen 46 KELVDYWRNEFDWRKHEARLNSFPHFKTEIDGLDIHFIHVRSKR---PNAIPLLLLHGWPGSFLEFLKV 111 (112)
T ss_dssp HHHHHHHHHT--HHHHHHHHTTS-EEEEEETTEEEEEEEE--S----TT-EEEEEE--SS--GGGGHHH
T ss_pred HHHHHHHhhcCChHHHHHHHHcCCCeeEEEeeEEEEEEEeeCCC---CCCeEEEEECCCCccHHhHHhh
Confidence 357788999998777776665444443 3456654445444332 3577899999999998877654
|
Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A. |
| >PLN03037 lipase class 3 family protein; Provisional | Back alignment and domain information |
|---|
Probab=93.62 E-value=0.1 Score=53.25 Aligned_cols=40 Identities=28% Similarity=0.322 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHh
Q 012190 223 GLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR 262 (468)
Q Consensus 223 ~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~ 262 (468)
+..++|..+++.........+|++.|||+||++|+..|..
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 3445555666543322224579999999999999988754
|
|
| >COG2830 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=93.51 E-value=0.88 Score=38.89 Aligned_cols=77 Identities=16% Similarity=0.040 Sum_probs=51.0
Q ss_pred eEEEeCCCCCchhhHHHhHhhhcCCe-EEEEecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHH
Q 012190 181 TLLFLPGIDGLGLGLILHHKPLGKAF-EVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAV 259 (468)
Q Consensus 181 ~lV~lHG~~~s~~~~~~~~~~L~~~~-~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~ 259 (468)
.||+.-|++.....+.+++ +.+.+ -++|+|+...... + |+. .-+.+.||++|||-.+|-.+
T Consensus 13 LIvyFaGwgtpps~v~HLi--lpeN~dl~lcYDY~dl~ld-f-----Dfs----------Ay~hirlvAwSMGVwvAeR~ 74 (214)
T COG2830 13 LIVYFAGWGTPPSAVNHLI--LPENHDLLLCYDYQDLNLD-F-----DFS----------AYRHIRLVAWSMGVWVAERV 74 (214)
T ss_pred EEEEEecCCCCHHHHhhcc--CCCCCcEEEEeehhhcCcc-c-----chh----------hhhhhhhhhhhHHHHHHHHH
Confidence 7888899999887765543 34444 4578897644321 0 111 11246799999999999888
Q ss_pred HHhCCCCceEEEEeCCCC
Q 012190 260 AARNPTIDLILILSNPAT 277 (468)
Q Consensus 260 a~~~P~~v~~lVli~p~~ 277 (468)
.... +.+..+.+++..
T Consensus 75 lqg~--~lksatAiNGTg 90 (214)
T COG2830 75 LQGI--RLKSATAINGTG 90 (214)
T ss_pred Hhhc--cccceeeecCCC
Confidence 8776 466677777643
|
|
| >PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=93.39 E-value=0.17 Score=45.67 Aligned_cols=40 Identities=15% Similarity=0.234 Sum_probs=30.1
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhC
Q 012190 221 FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARN 263 (468)
Q Consensus 221 ~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~ 263 (468)
+.|..+....++++. ..++|++|+|||.|+.+...+..++
T Consensus 77 y~DV~~AF~~yL~~~---n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 77 YSDVRAAFDYYLANY---NNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HHHHHHHHHHHHHhc---CCCCCEEEEEeChHHHHHHHHHHHH
Confidence 455555556666652 3567999999999999999998764
|
|
| >PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins | Back alignment and domain information |
|---|
Probab=93.39 E-value=0.11 Score=50.88 Aligned_cols=47 Identities=17% Similarity=0.239 Sum_probs=34.7
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHhCCC-----CceEEEEeCCCCCCCCCCcC
Q 012190 239 SPEKPIYLVGDSFGGCLALAVAARNPT-----IDLILILSNPATSFGRSQLQ 285 (468)
Q Consensus 239 ~~~~~i~LvGhS~GG~ia~~~a~~~P~-----~v~~lVli~p~~~~~~~~~~ 285 (468)
.+.+||.|||||+|+-+...+.....+ .|+.+++++.+.......|.
T Consensus 217 ~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~~~~W~ 268 (345)
T PF05277_consen 217 QGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSDPEEWR 268 (345)
T ss_pred CCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCCHHHHH
Confidence 367899999999999998777655433 48899999876655444443
|
|
| >PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function | Back alignment and domain information |
|---|
Probab=93.32 E-value=0.062 Score=38.62 Aligned_cols=48 Identities=17% Similarity=0.092 Sum_probs=24.4
Q ss_pred HHHhccCccCCCCCCceeeeecCCC---CCCCCCCeEEEeCCCCCchhhHH
Q 012190 149 YLDAAKEIIKPDGGPPRWFCPVDCG---RPLKGSPTLLFLPGIDGLGLGLI 196 (468)
Q Consensus 149 y~~~~~~~~~~dg~~~~~~~y~~~g---~~~~~~p~lV~lHG~~~s~~~~~ 196 (468)
|--+...+.+.||-.+...+-.... ...+.+|+|++.||+.+++..|.
T Consensus 10 Y~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~wv 60 (63)
T PF04083_consen 10 YPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDWV 60 (63)
T ss_dssp ---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGGC
T ss_pred CCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHHH
Confidence 3345556788898775544433222 12456889999999999998873
|
The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B. |
| >PLN02408 phospholipase A1 | Back alignment and domain information |
|---|
Probab=93.27 E-value=0.14 Score=50.46 Aligned_cols=21 Identities=29% Similarity=0.392 Sum_probs=18.3
Q ss_pred CcEEEEEeChhHHHHHHHHHh
Q 012190 242 KPIYLVGDSFGGCLALAVAAR 262 (468)
Q Consensus 242 ~~i~LvGhS~GG~ia~~~a~~ 262 (468)
.+|++.|||+||++|+.+|..
T Consensus 200 ~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 200 LSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred ceEEEeccchHHHHHHHHHHH
Confidence 369999999999999988865
|
|
| >PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases | Back alignment and domain information |
|---|
Probab=93.25 E-value=0.33 Score=50.98 Aligned_cols=99 Identities=12% Similarity=0.028 Sum_probs=51.9
Q ss_pred CCCeEEEeCCCCCc---h--hhHHHhHhhhcCCeEEEEecCC----CC---CCCC-------hHHHHHHHHHHHHHHhhc
Q 012190 178 GSPTLLFLPGIDGL---G--LGLILHHKPLGKAFEVRCLHIP----VY---DRTP-------FEGLVKFVEETVRREHAS 238 (468)
Q Consensus 178 ~~p~lV~lHG~~~s---~--~~~~~~~~~L~~~~~V~~~D~~----G~---G~Ss-------~~~~~~dl~~~i~~~~~~ 238 (468)
.-|++|++||.+.. + ..+....-...++.-|+++.+| |+ +... +.|....+.-+-+.+ ..
T Consensus 124 ~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI-~~ 202 (535)
T PF00135_consen 124 KLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNI-AA 202 (535)
T ss_dssp SEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHG-GG
T ss_pred ccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhh-hh
Confidence 46999999996332 2 1222222122567888888887 22 1111 223333322222222 22
Q ss_pred CC--CCcEEEEEeChhHHHHHHHHHh--CCCCceEEEEeCCCC
Q 012190 239 SP--EKPIYLVGDSFGGCLALAVAAR--NPTIDLILILSNPAT 277 (468)
Q Consensus 239 ~~--~~~i~LvGhS~GG~ia~~~a~~--~P~~v~~lVli~p~~ 277 (468)
.+ ..+|.|+|||.||..+...+.. ....++++|+.++..
T Consensus 203 FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 203 FGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred cccCCcceeeeeecccccccceeeecccccccccccccccccc
Confidence 22 3579999999998887655544 236899999998854
|
Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A .... |
| >PLN02847 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=92.68 E-value=0.57 Score=48.69 Aligned_cols=39 Identities=23% Similarity=0.325 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHh
Q 012190 224 LVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR 262 (468)
Q Consensus 224 ~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~ 262 (468)
+.+.+...+.......++-+++++|||+||++|..++..
T Consensus 233 I~~~i~~~L~kal~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 233 IAKLSTPCLLKALDEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHHHHHHHHHHHHCCCCeEEEeccChHHHHHHHHHHH
Confidence 333444444444445677799999999999999887764
|
|
| >PLN02324 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=92.54 E-value=0.2 Score=49.93 Aligned_cols=35 Identities=17% Similarity=0.235 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHhhcCCC--CcEEEEEeChhHHHHHHHHHh
Q 012190 224 LVKFVEETVRREHASSPE--KPIYLVGDSFGGCLALAVAAR 262 (468)
Q Consensus 224 ~~~dl~~~i~~~~~~~~~--~~i~LvGhS~GG~ia~~~a~~ 262 (468)
+.+.|..+++. .+. .+|++.|||+||++|+..|..
T Consensus 199 Vl~eV~~L~~~----Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 199 VQGELKRLLEL----YKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHH----CCCCCceEEEecCcHHHHHHHHHHHH
Confidence 34445555544 443 469999999999999988854
|
|
| >COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.36 E-value=0.51 Score=47.92 Aligned_cols=102 Identities=19% Similarity=0.128 Sum_probs=66.3
Q ss_pred CCCCCeEEEeCCCCCchhhHHHhHh----hh---------------cCCeEEEEecCC-CCCCC---------ChHHHHH
Q 012190 176 LKGSPTLLFLPGIDGLGLGLILHHK----PL---------------GKAFEVRCLHIP-VYDRT---------PFEGLVK 226 (468)
Q Consensus 176 ~~~~p~lV~lHG~~~s~~~~~~~~~----~L---------------~~~~~V~~~D~~-G~G~S---------s~~~~~~ 226 (468)
..+.|.++.+.|.+|++..+..+.+ .+ ...-.++-+|+| |.|.| +++...+
T Consensus 98 p~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~ 177 (498)
T COG2939 98 PANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGAGK 177 (498)
T ss_pred CCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhccch
Confidence 3468999999999999987765531 11 112467889954 66655 3555555
Q ss_pred HHHHHHHHHhhcC---CC--CcEEEEEeChhHHHHHHHHHhCCC---CceEEEEeCCCC
Q 012190 227 FVEETVRREHASS---PE--KPIYLVGDSFGGCLALAVAARNPT---IDLILILSNPAT 277 (468)
Q Consensus 227 dl~~~i~~~~~~~---~~--~~i~LvGhS~GG~ia~~~a~~~P~---~v~~lVli~p~~ 277 (468)
|+..+.+.....+ .. .+.+|+|.|+||.-+..+|..--+ ..++++++.+..
T Consensus 178 D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvl 236 (498)
T COG2939 178 DVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVL 236 (498)
T ss_pred hHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeee
Confidence 5555555444322 22 489999999999998888865433 356666665544
|
|
| >PLN02802 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=91.66 E-value=0.28 Score=50.03 Aligned_cols=21 Identities=43% Similarity=0.574 Sum_probs=18.2
Q ss_pred CcEEEEEeChhHHHHHHHHHh
Q 012190 242 KPIYLVGDSFGGCLALAVAAR 262 (468)
Q Consensus 242 ~~i~LvGhS~GG~ia~~~a~~ 262 (468)
.+|++.|||+||++|+..|..
T Consensus 330 ~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 330 LSITVTGHSLGAALALLVADE 350 (509)
T ss_pred ceEEEeccchHHHHHHHHHHH
Confidence 478999999999999987764
|
|
| >PLN02753 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=91.65 E-value=0.27 Score=50.31 Aligned_cols=22 Identities=36% Similarity=0.557 Sum_probs=19.1
Q ss_pred CCcEEEEEeChhHHHHHHHHHh
Q 012190 241 EKPIYLVGDSFGGCLALAVAAR 262 (468)
Q Consensus 241 ~~~i~LvGhS~GG~ia~~~a~~ 262 (468)
..+|++.|||+||++|+..|..
T Consensus 311 ~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 311 DLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred CceEEEEccCHHHHHHHHHHHH
Confidence 4689999999999999988853
|
|
| >KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=91.15 E-value=1.4 Score=42.11 Aligned_cols=115 Identities=17% Similarity=0.165 Sum_probs=75.8
Q ss_pred ceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhc--------------CCeEEEEecCC-CCCCC---------
Q 012190 164 PRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLG--------------KAFEVRCLHIP-VYDRT--------- 219 (468)
Q Consensus 164 ~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~--------------~~~~V~~~D~~-G~G~S--------- 219 (468)
.-|+.|..... ....|..+.+.|.++....-....+++. +.-.++-+|-| |.|.|
T Consensus 17 F~wly~~~~~~-ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~adllfvDnPVGaGfSyVdg~~~Y~ 95 (414)
T KOG1283|consen 17 FWWLYYATANV-KSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKDADLLFVDNPVGAGFSYVDGSSAYT 95 (414)
T ss_pred EEEEeeecccc-ccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhhccEEEecCCCcCceeeecCccccc
Confidence 35666654433 1346778888888666552222222221 23566777876 66655
Q ss_pred -ChHHHHHHHHHHHHHHhhcC---CCCcEEEEEeChhHHHHHHHHHhCC---------CCceEEEEeCCCCCC
Q 012190 220 -PFEGLVKFVEETVRREHASS---PEKPIYLVGDSFGGCLALAVAARNP---------TIDLILILSNPATSF 279 (468)
Q Consensus 220 -s~~~~~~dl~~~i~~~~~~~---~~~~i~LvGhS~GG~ia~~~a~~~P---------~~v~~lVli~p~~~~ 279 (468)
+.++.+.|+.++++.+...+ ...|++++..|+||-+|..++...- -...+++|-++++++
T Consensus 96 ~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWISP 168 (414)
T KOG1283|consen 96 TNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWISP 168 (414)
T ss_pred ccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccCh
Confidence 47888889998888876543 3579999999999999988885432 245678888887754
|
|
| >PLN02761 lipase class 3 family protein | Back alignment and domain information |
|---|
Probab=91.10 E-value=0.33 Score=49.65 Aligned_cols=21 Identities=43% Similarity=0.539 Sum_probs=18.2
Q ss_pred CCcEEEEEeChhHHHHHHHHH
Q 012190 241 EKPIYLVGDSFGGCLALAVAA 261 (468)
Q Consensus 241 ~~~i~LvGhS~GG~ia~~~a~ 261 (468)
..+|++.|||+||++|+..|.
T Consensus 293 ~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 293 EISITVTGHSLGASLALVSAY 313 (527)
T ss_pred CceEEEeccchHHHHHHHHHH
Confidence 347999999999999998774
|
|
| >PLN02719 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=90.92 E-value=0.36 Score=49.31 Aligned_cols=21 Identities=38% Similarity=0.525 Sum_probs=18.4
Q ss_pred CcEEEEEeChhHHHHHHHHHh
Q 012190 242 KPIYLVGDSFGGCLALAVAAR 262 (468)
Q Consensus 242 ~~i~LvGhS~GG~ia~~~a~~ 262 (468)
.+|.+.|||+||++|+..|..
T Consensus 298 ~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 298 LSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred ceEEEecCcHHHHHHHHHHHH
Confidence 479999999999999988753
|
|
| >KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.44 E-value=0.29 Score=48.30 Aligned_cols=78 Identities=21% Similarity=0.146 Sum_probs=46.6
Q ss_pred CCCCeEEEeCCCCC-chhhHHHhHhhhcCCeEEEEecCCCCCCC---C-------hHHHHHHHHHHHHHHhhcCCCCcEE
Q 012190 177 KGSPTLLFLPGIDG-LGLGLILHHKPLGKAFEVRCLHIPVYDRT---P-------FEGLVKFVEETVRREHASSPEKPIY 245 (468)
Q Consensus 177 ~~~p~lV~lHG~~~-s~~~~~~~~~~L~~~~~V~~~D~~G~G~S---s-------~~~~~~dl~~~i~~~~~~~~~~~i~ 245 (468)
+++..+|+.||+-+ +...|...+....+.+.-..+..+|+-.. + -+.+++++.+.+.. ....+|-
T Consensus 78 k~~HLvVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~----~si~kIS 153 (405)
T KOG4372|consen 78 KPKHLVVLTHGLHGADMEYWKEKIEQMTKKMPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYD----YSIEKIS 153 (405)
T ss_pred CCceEEEeccccccccHHHHHHHHHhhhcCCCcceEeeeccccchhhccccceeeecccHHHHhhhhhc----cccceee
Confidence 34568999999988 56678777766644322223333333221 1 13344444444333 2245899
Q ss_pred EEEeChhHHHHHH
Q 012190 246 LVGDSFGGCLALA 258 (468)
Q Consensus 246 LvGhS~GG~ia~~ 258 (468)
.+|||+||.++..
T Consensus 154 fvghSLGGLvar~ 166 (405)
T KOG4372|consen 154 FVGHSLGGLVARY 166 (405)
T ss_pred eeeeecCCeeeeE
Confidence 9999999998753
|
|
| >TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2 | Back alignment and domain information |
|---|
Probab=90.33 E-value=7.8 Score=39.50 Aligned_cols=102 Identities=20% Similarity=0.261 Sum_probs=63.6
Q ss_pred eeeecCCCCCCCCCCeEEEeCCCCCchhhHHH--hHhhhcCCeEEEEecCCCCCCC------ChH-HHHHHHHHHHHHHh
Q 012190 166 WFCPVDCGRPLKGSPTLLFLPGIDGLGLGLIL--HHKPLGKAFEVRCLHIPVYDRT------PFE-GLVKFVEETVRREH 236 (468)
Q Consensus 166 ~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~--~~~~L~~~~~V~~~D~~G~G~S------s~~-~~~~dl~~~i~~~~ 236 (468)
+++|...|+- ..|..|+.-|+-. .+.|.. .++.|..-| .+.-|.|=.|.+ .+| ...+-|.+.++.++
T Consensus 278 i~yYFnPGD~--KPPL~VYFSGyR~-aEGFEgy~MMk~Lg~Pf-LL~~DpRleGGaFYlGs~eyE~~I~~~I~~~L~~Lg 353 (511)
T TIGR03712 278 FIYYFNPGDF--KPPLNVYFSGYRP-AEGFEGYFMMKRLGAPF-LLIGDPRLEGGAFYLGSDEYEQGIINVIQEKLDYLG 353 (511)
T ss_pred eEEecCCcCC--CCCeEEeeccCcc-cCcchhHHHHHhcCCCe-EEeeccccccceeeeCcHHHHHHHHHHHHHHHHHhC
Confidence 3455555652 4567799999866 454443 345553322 233477777766 233 33445555666654
Q ss_pred hcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCC
Q 012190 237 ASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNP 275 (468)
Q Consensus 237 ~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p 275 (468)
.....++|-|-|||..-|+.+++... -.++|+.-|
T Consensus 354 --F~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKP 388 (511)
T TIGR03712 354 --FDHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKP 388 (511)
T ss_pred --CCHHHeeeccccccchhhhhhcccCC--CceEEEcCc
Confidence 33567999999999999999999862 235666544
|
This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase | Back alignment and domain information |
|---|
Probab=89.74 E-value=1.1 Score=43.70 Aligned_cols=74 Identities=26% Similarity=0.288 Sum_probs=49.9
Q ss_pred eEEEEecCC-CCCCCC---------hHHHHHHHHHHHHHHhhcC---CCCcEEEEEeChhHHHHHHHHHh----C-----
Q 012190 206 FEVRCLHIP-VYDRTP---------FEGLVKFVEETVRREHASS---PEKPIYLVGDSFGGCLALAVAAR----N----- 263 (468)
Q Consensus 206 ~~V~~~D~~-G~G~Ss---------~~~~~~dl~~~i~~~~~~~---~~~~i~LvGhS~GG~ia~~~a~~----~----- 263 (468)
.+++-+|.| |-|.|- -+..++++..+++...... ...+++|.|.|+||..+-.+|.. +
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~ 81 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 81 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccC
Confidence 367888988 777661 1233466666666554434 46799999999999987777654 2
Q ss_pred -CCCceEEEEeCCCCCC
Q 012190 264 -PTIDLILILSNPATSF 279 (468)
Q Consensus 264 -P~~v~~lVli~p~~~~ 279 (468)
+=.++|+++-+|....
T Consensus 82 ~~inLkGi~IGNg~t~~ 98 (319)
T PLN02213 82 PPINLQGYMLGNPVTYM 98 (319)
T ss_pred CceeeeEEEeCCCCCCc
Confidence 1257799998887644
|
|
| >KOG4569 consensus Predicted lipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.08 E-value=1 Score=44.29 Aligned_cols=37 Identities=30% Similarity=0.451 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHh
Q 012190 222 EGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR 262 (468)
Q Consensus 222 ~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~ 262 (468)
..+.+++..++.. .++-+|.+-|||+||++|..+|..
T Consensus 155 ~~~~~~~~~L~~~----~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIEL----YPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHh----cCCcEEEEecCChHHHHHHHHHHH
Confidence 4566666666665 677799999999999999988764
|
|
| >COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.72 E-value=0.61 Score=44.29 Aligned_cols=101 Identities=18% Similarity=0.100 Sum_probs=57.3
Q ss_pred CCCCCeEEEeCCCCCchh--hHHHhHhhh-cC----CeEEEEecCCC-------CCCC--ChHHHHHHHHHHHHHHhhcC
Q 012190 176 LKGSPTLLFLPGIDGLGL--GLILHHKPL-GK----AFEVRCLHIPV-------YDRT--PFEGLVKFVEETVRREHASS 239 (468)
Q Consensus 176 ~~~~p~lV~lHG~~~s~~--~~~~~~~~L-~~----~~~V~~~D~~G-------~G~S--s~~~~~~dl~~~i~~~~~~~ 239 (468)
..+-|++++.||-..... .+. ++..| .. .--++.+|.-- ++.. .+..+++++.=.++..-...
T Consensus 95 ~~k~pvl~~~DG~~~~~~g~i~~-~~dsli~~g~i~pai~vgid~~d~~~R~~~~~~n~~~~~~L~~eLlP~v~~~yp~~ 173 (299)
T COG2382 95 LEKYPVLYLQDGQDWFRSGRIPR-ILDSLIAAGEIPPAILVGIDYIDVKKRREELHCNEAYWRFLAQELLPYVEERYPTS 173 (299)
T ss_pred cccccEEEEeccHHHHhcCChHH-HHHHHHHcCCCCCceEEecCCCCHHHHHHHhcccHHHHHHHHHHhhhhhhccCccc
Confidence 446789999997432221 122 22233 22 24445555321 0111 13344444444444322111
Q ss_pred -CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 240 -PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 240 -~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
....-+|.|.|+||.+++..+.+||+.+..++..+|..
T Consensus 174 ~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~ 212 (299)
T COG2382 174 ADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSF 212 (299)
T ss_pred ccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCcc
Confidence 12345699999999999999999999998888877654
|
|
| >KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.45 E-value=0.85 Score=42.72 Aligned_cols=51 Identities=20% Similarity=0.313 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCC
Q 012190 223 GLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNP 275 (468)
Q Consensus 223 ~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p 275 (468)
.+-.+..+++..++...+...+.|-|||+||++|..+..++. +-.+..-+|
T Consensus 257 ryySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T KOG4540|consen 257 RYYSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred chhHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 334444555555555678889999999999999999988873 333444444
|
|
| >COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism] | Back alignment and domain information |
|---|
Probab=88.45 E-value=0.85 Score=42.72 Aligned_cols=51 Identities=20% Similarity=0.313 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCC
Q 012190 223 GLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNP 275 (468)
Q Consensus 223 ~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p 275 (468)
.+-.+..+++..++...+...+.|-|||+||++|..+..++. +-.+..-+|
T Consensus 257 ryySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T COG5153 257 RYYSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred chhHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 334444555555555678889999999999999999988873 333444444
|
|
| >KOG1516 consensus Carboxylesterase and related proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=85.34 E-value=1.7 Score=45.87 Aligned_cols=99 Identities=10% Similarity=-0.006 Sum_probs=51.6
Q ss_pred CCeEEEeCCCCCchhh---HHH-hHhhh--cCCeEEEEecCC----CC---CCC------ChHHHHHHHHHHHHHHhhc-
Q 012190 179 SPTLLFLPGIDGLGLG---LIL-HHKPL--GKAFEVRCLHIP----VY---DRT------PFEGLVKFVEETVRREHAS- 238 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~---~~~-~~~~L--~~~~~V~~~D~~----G~---G~S------s~~~~~~dl~~~i~~~~~~- 238 (468)
-|++|++||.+-.... +.. ....+ .+..-|+.+.+| |+ |.+ .+.|+...+..+-+++..-
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FG 191 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFG 191 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcC
Confidence 6899999998543332 211 11222 223555555554 22 111 2334443333332222211
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHh--CCCCceEEEEeCCCC
Q 012190 239 SPEKPIYLVGDSFGGCLALAVAAR--NPTIDLILILSNPAT 277 (468)
Q Consensus 239 ~~~~~i~LvGhS~GG~ia~~~a~~--~P~~v~~lVli~p~~ 277 (468)
...++|.|+|||.||+.+..+... ....+.++|..++..
T Consensus 192 Gdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~ 232 (545)
T KOG1516|consen 192 GDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNA 232 (545)
T ss_pred CCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccc
Confidence 235789999999999998655532 113555666655543
|
|
| >COG4947 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=85.33 E-value=3.6 Score=35.71 Aligned_cols=35 Identities=20% Similarity=0.180 Sum_probs=31.3
Q ss_pred cEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 243 PIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 243 ~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
.-++-|-||||..|..+.-++|+...++|.+++..
T Consensus 102 s~~~sgcsmGayhA~nfvfrhP~lftkvialSGvY 136 (227)
T COG4947 102 STIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVY 136 (227)
T ss_pred CccccccchhhhhhhhhheeChhHhhhheeeccee
Confidence 34578999999999999999999999999988755
|
|
| >COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=85.04 E-value=36 Score=32.43 Aligned_cols=97 Identities=11% Similarity=0.071 Sum_probs=68.0
Q ss_pred CCeEEEeCCCCCchh-hHHHhHhhhcCCeEEEEecCC-------CCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeC
Q 012190 179 SPTLLFLPGIDGLGL-GLILHHKPLGKAFEVRCLHIP-------VYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~-~~~~~~~~L~~~~~V~~~D~~-------G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS 250 (468)
.|.|+++-.+.|+.. ..+..++.|-....|+.-|+- +-|.-+++|+.+.+.+++..++. .+++++.+
T Consensus 103 dPkvLivapmsGH~aTLLR~TV~alLp~~~vyitDW~dAr~Vp~~~G~FdldDYIdyvie~~~~~Gp-----~~hv~aVC 177 (415)
T COG4553 103 DPKVLIVAPMSGHYATLLRGTVEALLPYHDVYITDWVDARMVPLEAGHFDLDDYIDYVIEMINFLGP-----DAHVMAVC 177 (415)
T ss_pred CCeEEEEecccccHHHHHHHHHHHhccccceeEeeccccceeecccCCccHHHHHHHHHHHHHHhCC-----CCcEEEEe
Confidence 455666666655554 556678888777788888873 44666899999999999998643 35667766
Q ss_pred hh-----HHHHHHHHHhCCCCceEEEEeCCCCCCC
Q 012190 251 FG-----GCLALAVAARNPTIDLILILSNPATSFG 280 (468)
Q Consensus 251 ~G-----G~ia~~~a~~~P~~v~~lVli~p~~~~~ 280 (468)
.- +++++..+...|..-..+++++++....
T Consensus 178 QP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDaR 212 (415)
T COG4553 178 QPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDAR 212 (415)
T ss_pred cCCchHHHHHHHHHhcCCCCCCceeeeecCccccc
Confidence 54 4555555556777888999998877443
|
|
| >PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=83.39 E-value=1.7 Score=43.17 Aligned_cols=96 Identities=15% Similarity=0.020 Sum_probs=73.9
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC----------ChHHHHHHHHHHHHHHhhcCCCCcEEEE
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT----------PFEGLVKFVEETVRREHASSPEKPIYLV 247 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S----------s~~~~~~dl~~~i~~~~~~~~~~~i~Lv 247 (468)
+.|+|+..-|++.+..-...-...|- +-+-+.+.+|-+|.| ++++-+.|...+++.++.-.++ +-+--
T Consensus 62 drPtV~~T~GY~~~~~p~r~Ept~Ll-d~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~-kWIST 139 (448)
T PF05576_consen 62 DRPTVLYTEGYNVSTSPRRSEPTQLL-DGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPG-KWIST 139 (448)
T ss_pred CCCeEEEecCcccccCccccchhHhh-ccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccC-Cceec
Confidence 57899999999886543322222221 345677899999988 5788899999999998876554 67789
Q ss_pred EeChhHHHHHHHHHhCCCCceEEEE-eCC
Q 012190 248 GDSFGGCLALAVAARNPTIDLILIL-SNP 275 (468)
Q Consensus 248 GhS~GG~ia~~~a~~~P~~v~~lVl-i~p 275 (468)
|-|-||+.++.+=.-||+.|++.|. ++|
T Consensus 140 G~SKGGmTa~y~rrFyP~DVD~tVaYVAP 168 (448)
T PF05576_consen 140 GGSKGGMTAVYYRRFYPDDVDGTVAYVAP 168 (448)
T ss_pred CcCCCceeEEEEeeeCCCCCCeeeeeecc
Confidence 9999999999888889999999888 444
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ]. |
| >COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=82.33 E-value=1.6 Score=42.55 Aligned_cols=47 Identities=13% Similarity=0.231 Sum_probs=40.3
Q ss_pred ccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCC-cEEEEeCCCCccccc
Q 012190 376 HAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQN-CIVRNFKDNGHTLLL 423 (468)
Q Consensus 376 ~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~-~~~~~i~~aGH~~~~ 423 (468)
.++..|..++.|..|.+.+++ .+..+...+|+ +-+..+|+..|...-
T Consensus 326 ~RLalpKyivnaSgDdff~pD-sa~lYyd~LPG~kaLrmvPN~~H~~~n 373 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPD-SANLYYDDLPGEKALRMVPNDPHNLIN 373 (507)
T ss_pred hhccccceeecccCCcccCCC-ccceeeccCCCceeeeeCCCCcchhhH
Confidence 567889999999999999999 68889999985 467889999998754
|
|
| >KOG2521 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=82.22 E-value=20 Score=35.26 Aligned_cols=61 Identities=23% Similarity=0.244 Sum_probs=45.7
Q ss_pred CCceEEEEEeCCCCCCCcHHHHHHHHHhCC----CcEEEEeCCCCcccccc-CcHHHHHHHHhcCcccc
Q 012190 378 VKAEVLVLASGKDNMLPSEDEAKRLNNSLQ----NCIVRNFKDNGHTLLLE-EGISLLTIIKGTCKYRR 441 (468)
Q Consensus 378 i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~----~~~~~~i~~aGH~~~~e-~p~~~~~~I~~~~F~~r 441 (468)
...+.+.+.+..|.++|.+ +.+++.+... +.+.+-+.++-|..++. .|....+... +|++.
T Consensus 224 ~~~~~ly~~s~~d~v~~~~-~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~--~Fl~~ 289 (350)
T KOG2521|consen 224 LPWNQLYLYSDNDDVLPAD-EIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCS--EFLRS 289 (350)
T ss_pred ccccceeecCCccccccHH-HHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHH--HHHHh
Confidence 3568889999999999999 6887755442 45666678899998775 7888777777 56544
|
|
| >PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE) | Back alignment and domain information |
|---|
Probab=81.96 E-value=5.5 Score=36.72 Aligned_cols=41 Identities=24% Similarity=0.268 Sum_probs=27.6
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhC
Q 012190 221 FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARN 263 (468)
Q Consensus 221 ~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~ 263 (468)
..+=++.+.+.++.... ...+++++|+|+|+.++...+.+.
T Consensus 29 v~~G~~~L~~ai~~~~~--~~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 29 VAEGVANLDAAIRAAIA--AGGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred HHHHHHHHHHHHHhhcc--CCCCEEEEEECHHHHHHHHHHHHH
Confidence 34444455555554222 466899999999999998777653
|
A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands []. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 63.3 bits (153), Expect = 1e-10
Identities = 87/516 (16%), Positives = 161/516 (31%), Gaps = 135/516 (26%)
Query: 7 IKGVSVSVKSILWNFQLSLVIAVQPVNSGKILIFIPLLFKTMASVINFPVSPSFVINSQY 66
K V KSIL ++ +I + SG + +F LL K V F V+ Y
Sbjct: 35 CKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEE---VLRINY 91
Query: 67 K---TSFRARAQSVGGGDSTVLSSGSIAVNGDP------VSREKEKNGALIDVGNGTLKP 117
K + + + + N + VSR + L+
Sbjct: 92 KFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYL---------KLRQ 142
Query: 118 RVEKKKLVKNVISEELEVLWDDGYG-TDSVKDYLDAAKEIIKPDGGPPRWFCPVDCGRPL 176
+ + + KNV+ + G G T D + K K D W ++
Sbjct: 143 ALLELRPAKNVL-----IDGVLGSGKTWVALDVCLSYKVQCKMDFK-IFW---LNLKN-- 191
Query: 177 KGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREH 236
SP + L +L+ + + R H + ++ +RR
Sbjct: 192 CNSPETVLEM------LQKLLYQ--IDPNWTSRSDHS---SNIKLR--IHSIQAELRRLL 238
Query: 237 ASSPEKPIYLVGD---------SFG-GCLALAVAARNPTI-DLI-------LILSNPATS 278
S P + LV +F C L + R + D + + L + + +
Sbjct: 239 KSKPYENCLLVLLNVQNAKAWNAFNLSCKIL-LTTRFKQVTDFLSAATTTHISLDHHSMT 297
Query: 279 FGRSQLQPLFP-----ILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIEN-------RLP 326
+++ L + +P E+ P LS ++ + I+ + +N +L
Sbjct: 298 LTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLS-IIAESIRDGLATWDNWKHVNCDKLT 356
Query: 327 PRIK--LEQLS-NNLPALLPRLSVMSD--IIPKDTL--LWKLKLLKSASAYANSRLHAVK 379
I+ L L + RLSV IP L +W
Sbjct: 357 TIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIW-------------------- 396
Query: 380 AEVLVLASGKDNMLPSEDEAKRLNNSLQN--CIVRNFKDNG---HTLLLEEGISLL---- 430
+++ S+ + N L + + K++ ++ LE + L
Sbjct: 397 ----------FDVIKSDVM--VVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYA 444
Query: 431 ---TIIKGTCKYRRSRKLDSVADFLPPSRQEFKYAF 463
+I+ Y + DS D +PP +Y +
Sbjct: 445 LHRSIVD---HYNIPKTFDS-DDLIPP--YLDQYFY 474
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* Length = 398 | Back alignment and structure |
|---|
Score = 53.2 bits (127), Expect = 8e-08
Identities = 35/214 (16%), Positives = 61/214 (28%), Gaps = 19/214 (8%)
Query: 224 LVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLI--LILSNPATSFGR 281
++K S ++G S GG ALA P +L LIL P R
Sbjct: 121 VLKIATC--ELGSIDSHPALNVVIGHSMGGFQALACDVLQP--NLFHLLILIEPVV-ITR 175
Query: 282 SQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIK--------MAMVNIENRLPPRIKLEQ 333
+ P L ++ + L D M + +I
Sbjct: 176 KAIGAGRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNGSFFTNAHSQILQNI 235
Query: 334 LSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYAN---SRLHAVKAEVLVLASGKD 390
+ + K L + +A S + V+ + + +
Sbjct: 236 IDFERTKASGDDEDGGPVRTKMEQAQNLLCYMNMQTFAPFLISNVKFVRKRTIHIVGARS 295
Query: 391 NMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLE 424
N P ++ L +LQN + H + +E
Sbjct: 296 NWCPPQN-QLFLQKTLQNYHLDVIPGGSHLVNVE 328
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A Length = 251 | Back alignment and structure |
|---|
Score = 51.8 bits (124), Expect = 1e-07
Identities = 23/213 (10%), Positives = 55/213 (25%), Gaps = 52/213 (24%)
Query: 216 YDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNP 275
+ + V H ++ +++ G S GG A+ P I + S+P
Sbjct: 69 LTKGNPDIWWAESSAAVA--HMTAKYAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSP 126
Query: 276 ATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLS 335
+ + M + + ++
Sbjct: 127 ILPGKHHLVPGFLKYAEYMNR------------------------LAGKSDESTQI---- 158
Query: 336 NNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLP- 394
L +L + + + L+ VK + +G+D ++
Sbjct: 159 ------------------LAYLPGQLAAIDQFATTVAADLNLVKQPTFIGQAGQDELVDG 200
Query: 395 --SEDEAKRLNNSLQNCIVRNFKDNGHTLLLEE 425
+ L N+ + + D H + +
Sbjct: 201 RLAYQLRDALINAARVDFHW-YDDAKHVITVNS 232
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A Length = 247 | Back alignment and structure |
|---|
Score = 51.3 bits (123), Expect = 1e-07
Identities = 31/240 (12%), Positives = 71/240 (29%), Gaps = 57/240 (23%)
Query: 200 KPLGKA-----FEVRCLHIPVYDRTP-------FEGLVKFVEETVRREHASSPEKPIYLV 247
+ LG+ + + P + + V + + I +
Sbjct: 33 RMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDVMNGYE-FLKNKGYEKIAVA 91
Query: 248 GDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLS 307
G S GG +L + P ++ + + +S+ +L+ Y
Sbjct: 92 GLSLGGVFSLKLGYTVPIEGIVTM--CAPM-YIKSEETMYEGVLE-----------YARE 137
Query: 308 YVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSA 367
Y + + E + P TL L+
Sbjct: 138 YKKREGKSEEQIEQE----------------MEKFKQ-------TPMKTLKA----LQEL 170
Query: 368 SAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVR--NFKDNGHTLLLEE 425
A L + A V+ + D M+ + A + N +++ + + ++ +GH + L++
Sbjct: 171 IADVRDHLDLIYAPTFVVQARHDEMINPDS-ANIIYNEIESPVKQIKWYEQSGHVITLDQ 229
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 Length = 296 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 3e-07
Identities = 32/183 (17%), Positives = 63/183 (34%), Gaps = 30/183 (16%)
Query: 241 EKPIYLVGDSFGGCLALAVAARNPTIDLI--LILSNPATSFGRSQLQPLFPILKAMPDEL 298
+ + +VG+S GG L V+ + +L+ L+L A + L PI+
Sbjct: 105 DGKVSIVGNSMGGATGLGVSVLHS--ELVNALVLMGSA-GLVVEIHEDLRPIINYDFTRE 161
Query: 299 HCAVPYLLSYVMGDPIKM--AMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDT 356
+ +L+ + D K+ AM+N R A + + + +
Sbjct: 162 --GMVHLVKALTNDGFKIDDAMINS------RYTYATDEATRKAYVATMQWIRE------ 207
Query: 357 LLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKD 416
+ Y + V+ LV+ D ++P E A + + + +
Sbjct: 208 --------QGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVE-TAYKFLDLIDDSWGYIIPH 258
Query: 417 NGH 419
GH
Sbjct: 259 CGH 261
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} Length = 270 | Back alignment and structure |
|---|
Score = 49.4 bits (118), Expect = 8e-07
Identities = 31/210 (14%), Positives = 62/210 (29%), Gaps = 46/210 (21%)
Query: 218 RTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277
RT F V VEE + I++ G S GG L L +A +P I I+ ++
Sbjct: 87 RTTFHDWVASVEEGYG--WLKQRCQTIFVTGLSMGGTLTLYLAEHHPDICGIVPINAAVD 144
Query: 278 SFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNN 337
+ L Y+ + +++ +
Sbjct: 145 IPAIAAGMTGG--------------GELPRYLDSIGSDLKNPDVKELAYEKTPTAS---- 186
Query: 338 LPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSED 397
L L A ++L + L+ S +D+++P +
Sbjct: 187 -----------------------LLQLARLMAQTKAKLDRIVCPALIFVSDEDHVVPPGN 223
Query: 398 EAKRLNNSLQNCIVR--NFKDNGHTLLLEE 425
A + + + +++ H L+
Sbjct: 224 -ADIIFQGISSTEKEIVRLRNSYHVATLDY 252
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} Length = 245 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 1e-06
Identities = 31/207 (14%), Positives = 67/207 (32%), Gaps = 38/207 (18%)
Query: 221 FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLI--LILSNPATS 278
G + V + + +K I L+G S GG + L VA + + ++ +
Sbjct: 63 VYGYIDNVANFITNSEVTKHQKNITLIGYSMGGAIVLGVALKKL--PNVRKVVSLSGGAR 120
Query: 279 FGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNL 338
F + + I D + + + I+N L + E L +
Sbjct: 121 FDKLDKDFMEKIYHNQLDN--------------NYLLECIGGIDNPLSEKY-FETLEKDP 165
Query: 339 PALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDE 398
++ L I D + L + V + + + + E
Sbjct: 166 DIMINDLIACKLI---DLV---------------DNLKNIDIPVKAIVAKDELLTLVEY- 206
Query: 399 AKRLNNSLQNCIVRNFKDNGHTLLLEE 425
++ + ++N ++ F+ H LL+
Sbjct: 207 SEIIKKEVENSELKIFETGKHFLLVVN 233
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} Length = 272 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 1e-06
Identities = 28/186 (15%), Positives = 59/186 (31%), Gaps = 23/186 (12%)
Query: 242 KPIYLVGDSFGGCLALAVAARNPTIDLI--LILSNPATSFGRSQLQPLFPILKAMPDELH 299
+ L G S+GG LA A+A D + L+ P + S+ I D
Sbjct: 89 RRFILYGHSYGGYLAQAIAFHLK--DQTLGVFLTCPVITADHSKRLTGKHINILEEDINP 146
Query: 300 CAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLW 359
+ + V I N+ + + T +
Sbjct: 147 VENKEYFADFLSM-----NVIINNQAWHDYQNLIIPGLQKE-------------DKTFID 188
Query: 360 KLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGH 419
+L+ S + + + ++ D ++ ++ +L N +N + GH
Sbjct: 189 QLQNNYSFTFEEKLKNINYQFPFKIMVGRNDQVVGYQE-QLKLINHNENGEIVLLNRTGH 247
Query: 420 TLLLEE 425
L++++
Sbjct: 248 NLMIDQ 253
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} Length = 278 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 1e-06
Identities = 28/190 (14%), Positives = 59/190 (31%), Gaps = 24/190 (12%)
Query: 244 IYLVGDSFGGCLALAVAARNPTIDLI--LILSNPATSF----GRSQLQPLFPI-LKAMPD 296
G S GG LAL A + + +I+ A S + + + +
Sbjct: 93 WGFAGHSAGGMLALVYATEAQ--ESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRIVS 150
Query: 297 ELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKL-EQLSNNLPALLPRLSVMSDIIPKD 355
++ + + +++ +L N+ + RL+ + KD
Sbjct: 151 IMNALNDDSTVQEERKALSREWALMSFYSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKD 210
Query: 356 TLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFK 415
+ +L VK + D P + + N + N + F+
Sbjct: 211 YDVR-------------QKLKFVKIPSFIYCGKHDVQCPYIF-SCEIANLIPNATLTKFE 256
Query: 416 DNGHTLLLEE 425
++ H +EE
Sbjct: 257 ESNHNPFVEE 266
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} Length = 316 | Back alignment and structure |
|---|
Score = 47.2 bits (112), Expect = 6e-06
Identities = 26/187 (13%), Positives = 50/187 (26%), Gaps = 23/187 (12%)
Query: 174 RPLKGSPTLLFL-PGIDGLGLGLILHHKPLGKAFEVRCLHIPVY-----DRTPFEGLVKF 227
++ S LFL I+G L L IP Y P + +
Sbjct: 40 NSVQSSERPLFLVHPIEGSTTVF----HSL-----ASRLSIPTYGLQCTRAAPLDSIHSL 90
Query: 228 VEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR--------NPTIDLILILSNPATSF 279
+ PE P + G S+G C+A + ++ L L +P
Sbjct: 91 AAYYIDCIRQVQPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSPTYVL 150
Query: 280 GRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLP 339
+Q + A+ + + + + ++ + +
Sbjct: 151 AYTQSYRAKLTPGCEAEAETEAICFFVQQFTDMEHNRVLEALLPLKGLEERVAAAVDLII 210
Query: 340 ALLPRLS 346
L
Sbjct: 211 KSHQGLD 217
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A Length = 283 | Back alignment and structure |
|---|
Score = 46.8 bits (111), Expect = 7e-06
Identities = 25/187 (13%), Positives = 49/187 (26%), Gaps = 23/187 (12%)
Query: 174 RPLKGSPTLLFL-PGIDGLGLGLILHHKPLGKAFEVRCLHIPVY-----DRTPFEGLVKF 227
++ S LFL I+G L L IP Y P + +
Sbjct: 18 NSVQSSERPLFLVHPIEGSTTVF----HSL-----ASRLSIPTYGLQCTRAAPLDSIHSL 68
Query: 228 VEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR--------NPTIDLILILSNPATSF 279
+ PE P + G S+G C+A + ++ L L +P
Sbjct: 69 AAYYIDCIRQVQPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSPTYVL 128
Query: 280 GRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLP 339
+ + A+ + + + + ++ + +
Sbjct: 129 AYTGSYRAKLTPGCEAEAETEAICFFVQQFTDMEHNRVLEALLPLKGLEERVAAAVDLII 188
Query: 340 ALLPRLS 346
L
Sbjct: 189 KSHQGLD 195
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A Length = 291 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 7e-06
Identities = 31/187 (16%), Positives = 63/187 (33%), Gaps = 30/187 (16%)
Query: 246 LVGDSFGGCLALAVAARNPTIDLI--LILSNPA----TSFGRSQLQPLFPILKAMPDELH 299
LVG++ GG A+ A P L+L P F + + + K
Sbjct: 110 LVGNALGGGTAVRFALDYP--ARAGRLVLMGPGGLSINLFAPDPTEGVKRLSKFSVAPTR 167
Query: 300 CAVPYLLSYVMGDPIKM--AMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTL 357
+ L ++ D + +V+ R L +L A + + +
Sbjct: 168 ENLEAFLRVMVYDKNLITPELVDQ------RFALASTPESLTATRAMGKSFAGADFEAGM 221
Query: 358 LWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDN 417
+W+ ++ ++ VL++ +D + P D A ++ + F
Sbjct: 222 MWR-------------EVYRLRQPVLLIWGREDRVNPL-DGALVALKTIPRAQLHVFGQC 267
Query: 418 GHTLLLE 424
GH + +E
Sbjct: 268 GHWVQVE 274
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} Length = 422 | Back alignment and structure |
|---|
Score = 47.1 bits (111), Expect = 8e-06
Identities = 62/378 (16%), Positives = 114/378 (30%), Gaps = 73/378 (19%)
Query: 63 NSQYKTSFRARAQSVGGGDSTVLSSGSIAVNGDPVSREKEKNGALIDVGNGTLKPRVEKK 122
+ FRA A+ + + A+ G E G L L+P
Sbjct: 40 RDEKGALFRAHARYCADACGELDLERAPALGGS--FAGLEPMGLLW-----ALEPEKPFW 92
Query: 123 KLVKNVISEELEVLWDDGYGTDSVKDYLDAAKEIIKPDGGPPRWFCPVDCGR-------- 174
+ +K + V + G D L + + P W V GR
Sbjct: 93 RFLKRDVQIPFVVELEVLDGHDPEPGRLLCQAQHERHFLPPGVWRQSVRAGRVRATLFLP 152
Query: 175 -PLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP--FEGL-VKFVEE 230
P ++ + GI G GL G F L ++ P + + +++ EE
Sbjct: 153 PGPGPFPGIIDIFGIGG-GLLEYRASLLAGHGFATLALAYYNFEDLPNNMDNISLEYFEE 211
Query: 231 TVR--REHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLF 288
V +H I L+G S G + L++A+ + + ++ S +
Sbjct: 212 AVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKNVSATVSINGSGISGNTAIN---- 267
Query: 289 PILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVM 348
+ Y L IK+A + + + R L N P+++P
Sbjct: 268 -----YKHSSIPPLGYDLRR-----IKVAFSGLVDIVDIRNALVGGYKN-PSMIP----- 311
Query: 349 SDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQN 408
+ + +L++ D+ SE A+ ++ LQ
Sbjct: 312 --------------------------IEKAQGPILLIVGQDDHNWRSELYAQTVSERLQA 345
Query: 409 CIVRN-----FKDNGHTL 421
+ GH +
Sbjct: 346 HGKEKPQIICYPGTGHYI 363
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} Length = 306 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 9e-06
Identities = 27/181 (14%), Positives = 57/181 (31%), Gaps = 29/181 (16%)
Query: 246 LVGDSFGGCLALAVAARNPTIDLI--LILSNPATSFGRSQLQPLFPILKAMPDELHCAVP 303
++G S GG + R P + + + +PA +F L V
Sbjct: 138 MIGLSLGGLHTMNFLLRMP--ERVKSAAILSPAETFLPFHHDFYKYALGLTASN---GVE 192
Query: 304 YLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKL 363
L+++M D + + ++ + + N P V +D
Sbjct: 193 TFLNWMMNDQNVLHPIFVKQFKAGVMWQDGSRNPNPNADGFPYVFTD------------- 239
Query: 364 LKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLL 423
L + + +L+L + + R ++ + + K+ GH L +
Sbjct: 240 ---------EELRSARVPILLLLGEHEVIYDPHSALHRASSFVPDIEAEVIKNAGHVLSM 290
Query: 424 E 424
E
Sbjct: 291 E 291
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A Length = 255 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 9e-06
Identities = 31/260 (11%), Positives = 71/260 (27%), Gaps = 52/260 (20%)
Query: 180 PTLLFLPGIDGLGLGLILHHKPLGKAFEVRCL---------HIPVYDRTPFEGLVKFVEE 230
++ + G+ G L + + L + + PV + + + + + +
Sbjct: 17 SPIVLVHGLFGSLDNLGVLARDLVNDHNIIQVDVRNHGLSPREPVMN---YPAMAQDLVD 73
Query: 231 TVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTI--DLILILSNPATSFGRSQLQPLF 288
T+ +G S GG +A+ A P L+ I P R +F
Sbjct: 74 TLDALQI----DKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRH-DEIF 128
Query: 289 PILKAMPDEL----HCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPR 344
+ A+ + A + ++ + + ++ R + L + P ++
Sbjct: 129 AAINAVSESDAQTRQQAAAIMRQHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIV-- 186
Query: 345 LSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNN 404
++ A L + G + + L
Sbjct: 187 --------------------------GWEKIPAWDHPALFIPGGNSPYVSEQY-RDDLLA 219
Query: 405 SLQNCIVRNFKDNGHTLLLE 424
GH + E
Sbjct: 220 QFPQARAHVIAGAGHWVHAE 239
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 Length = 285 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 1e-05
Identities = 33/181 (18%), Positives = 60/181 (33%), Gaps = 20/181 (11%)
Query: 246 LVGDSFGGCLALAVAARNPTIDLI--LILSNPATSFGRSQLQPLFPILKAMPDELHCAVP 303
+VG+S GG + L + P + + L + ++ L +L D
Sbjct: 107 IVGNSMGGAVTLQLVVEAP--ERFDKVALMGSVGAPMNARPPELARLLAFYADPRLTPYR 164
Query: 304 YLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKL 363
L+ + DP + +K N P + VM +K
Sbjct: 165 ELIHSFVYDPENFP------GMEEIVKSRFEVANDPEVRRIQEVM---------FESMKA 209
Query: 364 LKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLL 423
+ + L + +VLV +D ++P D + L L++ + GH L
Sbjct: 210 GMESLVIPPATLGRLPHDVLVFHGRQDRIVPL-DTSLYLTKHLKHAELVVLDRCGHWAQL 268
Query: 424 E 424
E
Sbjct: 269 E 269
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} Length = 289 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 2e-05
Identities = 30/185 (16%), Positives = 59/185 (31%), Gaps = 28/185 (15%)
Query: 246 LVGDSFGGCLALAVAARNPTIDLI--LILSNPATSFGRSQLQPLFPILKAMPDELHCAVP 303
L+G+S GG ++A + P + + L+L T +K +
Sbjct: 111 LLGNSMGGHSSVAFTLKWP--ERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTI 168
Query: 304 ----YLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLW 359
++ + D + E R L + + L + + +
Sbjct: 169 ENLKLMMDIFVFDTSDLTDALFEAR------LNNMLSRRDHLENFVKSLEANPKQFPDFG 222
Query: 360 KLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGH 419
RL +KA+ L++ D +P + RL + + + F+D GH
Sbjct: 223 -------------PRLAEIKAQTLIVWGRNDRFVPMD-AGLRLLSGIAGSELHIFRDCGH 268
Query: 420 TLLLE 424
E
Sbjct: 269 WAQWE 273
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A Length = 282 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 2e-05
Identities = 31/179 (17%), Positives = 60/179 (33%), Gaps = 24/179 (13%)
Query: 243 PIYLVGDSFGGCLALAVAARNPTIDLI--LILSNPATSFGRSQLQPLFPILKAMPDELHC 300
++VG++FGG LA+A A R + + ++L A + L + P
Sbjct: 96 KAHIVGNAFGGGLAIATALRYS--ERVDRMVLMGAAG-TRFDVTEGLNAVWGYTPSIE-- 150
Query: 301 AVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWK 360
+ LL D + R I + ++ P
Sbjct: 151 NMRNLLDIFAYDRSLVTDELARLRYEASI-QPGFQESFSSMFPEP--------------- 194
Query: 361 LKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGH 419
+ A A ++ + + E L++ +D ++P + RL + + F GH
Sbjct: 195 RQRWIDALASSDEDIKTLPNETLIIHGREDQVVPL-SSSLRLGELIDRAQLHVFGRCGH 252
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 2e-05
Identities = 40/219 (18%), Positives = 68/219 (31%), Gaps = 37/219 (16%)
Query: 180 PTLLFLPGIDGLGLGLILHHKPLGKAFEVR----CLHIPVY--------DRTPFEGLVKF 227
PTL L + L L H G L IP Y + L +
Sbjct: 2230 PTLTRLNSVQSAERPLFLVHPIEGSITVFHGLAAKLSIPTYGLQCTGAAPLDSIQSLASY 2289
Query: 228 VEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR------NPTIDLILILSNPATSFGR 281
E +R+ PE P + G S+G C+A + ++ + L L + + +F
Sbjct: 2290 YIECIRQ---VQPEGPYRIAGYSYGACVAFEMCSQLQAQQSATPGNHSLFLFDGSHTFVL 2346
Query: 282 SQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPR--IKLEQLSNNLP 339
+ Q + + + A AM + K+ + L
Sbjct: 2347 AYTQSVRAKMTPGCEAEAEA--------------KAMYFFVQQFTDMEQGKVLEALIPLQ 2392
Query: 340 ALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAV 378
L R++ D+I + L A+ +L A
Sbjct: 2393 GLEARVAATVDLITQSHAGLDRHALSFAARSFYQKLRAA 2431
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} Length = 269 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 3e-05
Identities = 38/187 (20%), Positives = 69/187 (36%), Gaps = 23/187 (12%)
Query: 242 KPIYLVGDSFGGCLALAVAARNPT-ID-LILILSNP--ATSFGRSQLQPLFPILKAMPDE 297
K I L G S GG +AL A I LIL ++P + + + + + D
Sbjct: 83 KSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEANQLERRLVDDARAKVLDI 142
Query: 298 LHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTL 357
+ ++ P+ + + + + +I+ ++LS + + L +
Sbjct: 143 A--GIELFVNDWEKLPLFQSQLELPVEIQHQIRQQRLSQSPHKMAKALRDYGTGQMPN-- 198
Query: 358 LWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDN 417
LW RL +K L+LA D AK++ N + N +
Sbjct: 199 LW-------------PRLKEIKVPTLILAGEYDEKFVQ--IAKKMANLIPNSKCKLISAT 243
Query: 418 GHTLLLE 424
GHT+ +E
Sbjct: 244 GHTIHVE 250
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} Length = 446 | Back alignment and structure |
|---|
Score = 45.2 bits (106), Expect = 3e-05
Identities = 63/379 (16%), Positives = 110/379 (29%), Gaps = 77/379 (20%)
Query: 64 SQYKTSFRARAQSVGGGDSTVLSSGSIAVNGDPVSREKEKNGALIDVGNGTLKPRVEKKK 123
+ F+A A+ + + A+ G E L+P +
Sbjct: 57 DEKGALFQAHARYRADTLGELDLERAPALGGSFAGLEPMGLLW-------ALEPEKPLVR 109
Query: 124 LVKNVISEELEVLWDDGYGTDSVKDYLDAAKEIIKPDGGPPRWFCPVDCGRPL------- 176
LVK + L V + G D L + P PV GR
Sbjct: 110 LVKRDVRTPLAVELEVLDGHDPDPGRLLCQTRHERYFLPPGVRREPVRVGRVRGTLFLPP 169
Query: 177 --KGSPTLLFLPGIDGLGLGLILHHKPL--GKAFEVRCLHIPVYDRTP--FEGL-VKFVE 229
P ++ + G G GL+ + L GK F V L Y+ P E L +++ E
Sbjct: 170 EPGPFPGIVDMFGTGG---GLLEYRASLLAGKGFAVMALAYYNYEDLPKTMETLHLEYFE 226
Query: 230 ETVR--REHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPL 287
E + H + L+G S GG L L++A+ I ++++ + G +
Sbjct: 227 EAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKGITAAVVINGSVANVGGTLR--- 283
Query: 288 FPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSV 347
E V + +
Sbjct: 284 ------YKGETLPPVGVNRNRIK------------------------------------- 300
Query: 348 MSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ 407
++ D + L+ + + ++ L L D+ SE A LQ
Sbjct: 301 VTKDGYADIVDVLNSPLEGPDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQ 360
Query: 408 -----NCIVRNFKDNGHTL 421
+ + + GH +
Sbjct: 361 AHGRRKPQIICYPETGHYI 379
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} Length = 342 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 3e-05
Identities = 36/177 (20%), Positives = 61/177 (34%), Gaps = 37/177 (20%)
Query: 221 FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFG 280
F V+ V + V P P++L+G S GG +A+ AA P ++L +P
Sbjct: 111 FHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPL---- 166
Query: 281 RSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPA 340
+ A P+ K+ + N + P + L + +
Sbjct: 167 ----------VLANPESAT-------------TFKVLAAKVLNLVLPNLSLGPID---SS 200
Query: 341 LLPRLSVMSDIIPKDTLLWKLKL-------LKSASAYANSRLHAVKAEVLVLASGKD 390
+L R DI D L+ + L L +A + L + L+L D
Sbjct: 201 VLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSAD 257
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* Length = 244 | Back alignment and structure |
|---|
Score = 44.1 bits (104), Expect = 3e-05
Identities = 21/87 (24%), Positives = 28/87 (32%), Gaps = 12/87 (13%)
Query: 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVY--DRTPFEGLVKFVEETVRRE 235
G L P I G G+ K L + VY + ++ +
Sbjct: 21 GGKNLFCFPPISGFGIYF----KDLALQLNHKA---AVYGFHFIEEDSRIEQYVSRITEI 73
Query: 236 HASSPEKPIYLVGDSFGGCLALAVAAR 262
PE P L+G S GG LA V
Sbjct: 74 Q---PEGPYVLLGYSAGGNLAFEVVQA 97
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* Length = 303 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 7e-05
Identities = 34/179 (18%), Positives = 58/179 (32%), Gaps = 41/179 (22%)
Query: 221 FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLI--LILSNPATS 278
F V+ V + V P P++L+G S GG +A+ AA P ++L +P
Sbjct: 93 FHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERP--GHFAGMVLISPLV- 149
Query: 279 FGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNL 338
L + K+ + N + P + +
Sbjct: 150 --------------------------LANPESATTFKVLAAKVLNSVLPNLSSGPID--- 180
Query: 339 PALLPRLSVMSDIIPKDTLLWKLKL-------LKSASAYANSRLHAVKAEVLVLASGKD 390
++L R DI D L+ + L L +A + L + L+L D
Sbjct: 181 SSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSAD 239
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A Length = 319 | Back alignment and structure |
|---|
Score = 43.0 bits (101), Expect = 1e-04
Identities = 18/116 (15%), Positives = 34/116 (29%), Gaps = 16/116 (13%)
Query: 159 PDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHH--KPLGKAFEVRCLHIPVY 216
+ P R +G L+ G G + + + +P Y
Sbjct: 70 SERLDPVLLAGGPTDRA-EGRAVLVGCTGTAANGGPHEFLRLSTSFQEERDFLAVPLPGY 128
Query: 217 -DRTP---------FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR 262
T + + + R + + P+ L+G + G LA +A R
Sbjct: 129 GTGTGTGTALLPADLDTALDAQARAILRA---AGDAPVVLLGHAGGALLAHELAFR 181
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A Length = 300 | Back alignment and structure |
|---|
Score = 42.5 bits (100), Expect = 1e-04
Identities = 18/97 (18%), Positives = 28/97 (28%), Gaps = 20/97 (20%)
Query: 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVY--------DRTPF----EGLV 225
G T++ G + L A PV + P +
Sbjct: 66 GEVTVICCAG--TAAISGPHEFTRLAGALRGI---APVRAVPQPGYEEGEPLPSSMAAVA 120
Query: 226 KFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR 262
+ V R +KP + G S G +A A+A
Sbjct: 121 AVQADAVIRTQ---GDKPFVVAGHSAGALMAYALATE 154
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} Length = 292 | Back alignment and structure |
|---|
Score = 42.3 bits (99), Expect = 2e-04
Identities = 32/261 (12%), Positives = 65/261 (24%), Gaps = 37/261 (14%)
Query: 177 KGSPTLLFLP--GIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP--------FEGLVK 226
+G+P +FL G L + + + P +P V
Sbjct: 39 EGNPCFVFLSGAGFFSTADNFANIIDKLPDSIGILTIDAPNSGYSPVSNQANVGLRDWVN 98
Query: 227 FVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPT-ID-LILILSNPATSFGRSQL 284
+ + L S GG AL + ++ I + +
Sbjct: 99 AILMIFEHFKF----QSYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPTTVMIYRAGFS 154
Query: 285 QPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPR 344
L+P L +L + ++ + +QL +
Sbjct: 155 SDLYPQLALRRQKLK----------TAADRLNYLKDLSRSHFSSQQFKQLWRGYDYCQRQ 204
Query: 345 LSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNN 404
L+ + L K+ + + K +V + E E +
Sbjct: 205 LNDVQ-------SLPDFKIRLALGEEDFKTGISEKIPSIVFSESFREKEYLESEYLNKHT 257
Query: 405 SLQNCIVRNFKDNGHTLLLEE 425
+ ++ H L E
Sbjct: 258 QTK--LI--LCGQHHYLHWSE 274
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* Length = 251 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 2e-04
Identities = 24/105 (22%), Positives = 37/105 (35%), Gaps = 10/105 (9%)
Query: 240 PEKPIYLVGDSFGGCLALAVAARNPTIDLI--LILSNPATSFGRSQLQPLFPILKAMPDE 297
IY+ G S GG + AA D+I LI +PA LK P+
Sbjct: 98 FVTDIYMAGHSQGGLSVMLAAAMER--DIIKALIPLSPAAMIPEIARTGELLGLKFDPE- 154
Query: 298 LHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALL 342
+P L G +K V + + +++ P L+
Sbjct: 155 ---NIPDELDAWDGRKLKGNYVRVAQTIRVEDFVDKY--TKPVLI 194
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 Length = 230 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 2e-04
Identities = 19/94 (20%), Positives = 30/94 (31%), Gaps = 19/94 (20%)
Query: 174 RPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVY-----DRTPFEGLVKFV 228
+ P + G GL + L +P Y D E +
Sbjct: 12 MNQDQEQIIFAFPPVLGYGLMY----QNLSS-------RLPSYKLCAFDFIEEEDRLDRY 60
Query: 229 EETVRREHASSPEKPIYLVGDSFGGCLALAVAAR 262
+ +++ PE P+ L G S G LA A +
Sbjct: 61 ADLIQKLQ---PEGPLTLFGYSAGCSLAFEAAKK 91
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A Length = 286 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 4e-04
Identities = 38/218 (17%), Positives = 67/218 (30%), Gaps = 44/218 (20%)
Query: 214 PVYDRTPFEGLVKFVEETVRR---EHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLI- 269
V D + V+ + + A LVG++ GG AL A P D I
Sbjct: 80 VVMDEQRGLVNARAVKGLMDALDIDRAH-------LVGNAMGGATALNFALEYP--DRIG 130
Query: 270 -LILSNPA-------TSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNI 321
LIL P ++ LF + E + +L + D + +
Sbjct: 131 KLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYE---TLKQMLQVFLYDQSLITEELL 187
Query: 322 ENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAE 381
+ R + P L + + P T +RL +KA+
Sbjct: 188 QGRW-------EAIQRQPEHLKNFLISAQKAPLST------------WDVTARLGEIKAK 228
Query: 382 VLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGH 419
+ D +P + +L ++ + + F G
Sbjct: 229 TFITWGRDDRFVPLD-HGLKLLWNIDDARLHVFSKCGA 265
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A Length = 254 | Back alignment and structure |
|---|
Score = 40.3 bits (95), Expect = 7e-04
Identities = 24/181 (13%), Positives = 48/181 (26%), Gaps = 40/181 (22%)
Query: 246 LVGDSFGGCLALAVAARNPTIDLI--LILSNPATSFGRSQLQPLFPILKAMPDELHCAVP 303
L+G S GG AL AA+ P I +++ I + + D
Sbjct: 98 LLGWSDGGITALIAAAKYP--SYIHKMVIWGANAYVTDEDSM----IYEGIRD------- 144
Query: 304 YLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKL 363
+ L + + + + +
Sbjct: 145 ----------VSKWSERTRKPLEALYGYDYFARTCEKWVDGIRQFKHL------------ 182
Query: 364 LKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLL 423
L V+ L++ KD ++P A ++ ++ + + H L L
Sbjct: 183 --PDGNICRHLLPRVQCPALIVHGEKDPLVPRFH-ADFIHKHVKGSRLHLMPEGKHNLHL 239
Query: 424 E 424
Sbjct: 240 R 240
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 468 | |||
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 99.97 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 99.97 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 99.97 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 99.97 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 99.96 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 99.96 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 99.96 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 99.96 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 99.96 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 99.96 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 99.96 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 99.96 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 99.96 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 99.96 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 99.96 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 99.96 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 99.96 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 99.96 | |
| 4fbl_A | 281 | LIPS lipolytic enzyme; thermostable, structural ge | 99.96 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 99.96 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 99.96 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 99.96 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 99.96 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 99.96 | |
| 4dnp_A | 269 | DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu | 99.96 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 99.96 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 99.95 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 99.95 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 99.95 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 99.95 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 99.95 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 99.95 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 99.95 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 99.95 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 99.95 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 99.95 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 99.95 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 99.95 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 99.95 | |
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 99.95 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 99.95 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 99.95 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 99.95 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 99.95 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 99.95 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 99.95 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 99.94 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 99.94 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 99.94 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 99.94 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 99.94 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 99.94 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 99.94 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 99.94 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 99.94 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 99.94 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 99.94 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 99.94 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 99.94 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 99.94 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 99.94 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 99.94 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 99.94 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 99.94 | |
| 4g9e_A | 279 | AHL-lactonase, alpha/beta hydrolase fold protein; | 99.94 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 99.94 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 99.94 | |
| 3i1i_A | 377 | Homoserine O-acetyltransferase; structural genomic | 99.93 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 99.93 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 99.93 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 99.93 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 99.93 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 99.93 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 99.93 | |
| 3fla_A | 267 | RIFR; alpha-beta hydrolase thioesterase, hydrolase | 99.93 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.93 | |
| 2pl5_A | 366 | Homoserine O-acetyltransferase; alpha/beta hydrola | 99.93 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 99.92 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 99.92 | |
| 2b61_A | 377 | Homoserine O-acetyltransferase; acyl-enzyme, aspar | 99.92 | |
| 2vat_A | 444 | Acetyl-COA--deacetylcephalosporin C acetyltransfer | 99.92 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 99.92 | |
| 4i19_A | 388 | Epoxide hydrolase; structural genomics, PSI-biolog | 99.92 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 99.92 | |
| 1k8q_A | 377 | Triacylglycerol lipase, gastric; APHA beta hydrola | 99.92 | |
| 1pja_A | 302 | Palmitoyl-protein thioesterase 2 precursor; hydrol | 99.92 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 99.91 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 99.91 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 99.85 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 99.91 | |
| 3h04_A | 275 | Uncharacterized protein; protein with unknown func | 99.91 | |
| 3g02_A | 408 | Epoxide hydrolase; alpha/beta hydrolase fold, enan | 99.9 | |
| 3qmv_A | 280 | Thioesterase, REDJ; alpha/beta hydrolase fold, hyd | 99.9 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 99.89 | |
| 2q0x_A | 335 | Protein DUF1749, uncharacterized protein; alpha/be | 99.89 | |
| 2qs9_A | 194 | Retinoblastoma-binding protein 9; B5T overexpresse | 99.89 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 99.89 | |
| 3trd_A | 208 | Alpha/beta hydrolase; cellular processes; 1.50A {C | 99.89 | |
| 2pbl_A | 262 | Putative esterase/lipase/thioesterase; alpha/beta- | 99.88 | |
| 1uxo_A | 192 | YDEN protein; hydrolase, A/B hydrolase, esterase, | 99.88 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 99.88 | |
| 1jfr_A | 262 | Lipase; serine hydrolase; 1.90A {Streptomyces exfo | 99.87 | |
| 2i3d_A | 249 | AGR_C_3351P, hypothetical protein ATU1826; structu | 99.87 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 99.87 | |
| 3bdv_A | 191 | Uncharacterized protein DUF1234; DUF1234 family pr | 99.87 | |
| 3ils_A | 265 | PKS, aflatoxin biosynthesis polyketide synthase; A | 99.87 | |
| 1zi8_A | 236 | Carboxymethylenebutenolidase; alpha and beta prote | 99.86 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 99.86 | |
| 2k2q_B | 242 | Surfactin synthetase thioesterase subunit; A/B-hyd | 99.86 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 99.86 | |
| 2r8b_A | 251 | AGR_C_4453P, uncharacterized protein ATU2452; APC6 | 99.86 | |
| 1fj2_A | 232 | Protein (acyl protein thioesterase 1); alpha/beta | 99.85 | |
| 2fuk_A | 220 | XC6422 protein; A/B hydrolase, structural genomics | 99.85 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 99.85 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 99.85 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 99.85 | |
| 4fle_A | 202 | Esterase; structural genomics, PSI-biology, northe | 99.84 | |
| 3cn9_A | 226 | Carboxylesterase; alpha/beta hydrolase fold super- | 99.84 | |
| 3vis_A | 306 | Esterase; alpha/beta-hydrolase fold, polyethylene | 99.84 | |
| 1auo_A | 218 | Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl | 99.83 | |
| 3bjr_A | 283 | Putative carboxylesterase; structural genomics, jo | 99.83 | |
| 2h1i_A | 226 | Carboxylesterase; structural genomics, PSI-2, prot | 99.83 | |
| 1qlw_A | 328 | Esterase; anisotropic refinement, atomic resolutio | 99.83 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 99.83 | |
| 3f67_A | 241 | Putative dienelactone hydrolase; alpha-beta-alpha | 99.83 | |
| 1kez_A | 300 | Erythronolide synthase; polyketide synthase, modul | 99.82 | |
| 3lcr_A | 319 | Tautomycetin biosynthetic PKS; alpha-beta hydrolas | 99.82 | |
| 3hxk_A | 276 | Sugar hydrolase; alpha-beta protein., structural g | 99.82 | |
| 3og9_A | 209 | Protein YAHD A copper inducible hydrolase; alpha/b | 99.82 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 99.81 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 99.81 | |
| 2hdw_A | 367 | Hypothetical protein PA2218; alpha/beta hydrolase | 99.81 | |
| 3b5e_A | 223 | MLL8374 protein; NP_108484.1, carboxylesterase, st | 99.8 | |
| 3bxp_A | 277 | Putative lipase/esterase; putative carboxylesteras | 99.79 | |
| 3u0v_A | 239 | Lysophospholipase-like protein 1; alpha, beta hydr | 99.79 | |
| 3lp5_A | 250 | Putative cell surface hydrolase; structural genom | 99.78 | |
| 2c7b_A | 311 | Carboxylesterase, ESTE1; carboxyesterase, thermoph | 99.78 | |
| 2fx5_A | 258 | Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pse | 99.78 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 99.78 | |
| 4e15_A | 303 | Kynurenine formamidase; alpha/beta hydrolase fold, | 99.77 | |
| 4h0c_A | 210 | Phospholipase/carboxylesterase; PSI-biology, midwe | 99.77 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.77 | |
| 2o7r_A | 338 | CXE carboxylesterase; alpha/beta hydrolase; 1.40A | 99.77 | |
| 3d7r_A | 326 | Esterase; alpha/beta fold, hydrolase; 2.01A {Staph | 99.77 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 99.77 | |
| 2zsh_A | 351 | Probable gibberellin receptor GID1L1; plant hormon | 99.77 | |
| 3ain_A | 323 | 303AA long hypothetical esterase; carboxylesterase | 99.77 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 99.76 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.76 | |
| 3ds8_A | 254 | LIN2722 protein; unkonwn function, structural geno | 99.75 | |
| 2qru_A | 274 | Uncharacterized protein; alpha/beta-hydrolase, str | 99.75 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 99.75 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.75 | |
| 3fle_A | 249 | SE_1780 protein; structural genomics, APC61035.1, | 99.74 | |
| 1tca_A | 317 | Lipase; hydrolase(carboxylic esterase); HET: NAG; | 99.74 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 99.74 | |
| 2hm7_A | 310 | Carboxylesterase; alpha/beta hydrolase fold, hydro | 99.74 | |
| 1jmk_C | 230 | SRFTE, surfactin synthetase; thioesterase, non-rib | 99.73 | |
| 1lzl_A | 323 | Heroin esterase; alpha/beta hydrolase; 1.30A {Rhod | 99.73 | |
| 3tjm_A | 283 | Fatty acid synthase; thioesterase domain, fatty ac | 99.73 | |
| 2wir_A | 313 | Pesta, alpha/beta hydrolase fold-3 domain protein; | 99.73 | |
| 2cb9_A | 244 | Fengycin synthetase; thioesterase, non-ribosomal p | 99.72 | |
| 1ycd_A | 243 | Hypothetical 27.3 kDa protein in AAP1-SMF2 interge | 99.71 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.71 | |
| 1jji_A | 311 | Carboxylesterase; alpha-beta hydrolase fold, hydro | 99.71 | |
| 3ga7_A | 326 | Acetyl esterase; phosphoserine, IDP00896, hydrolas | 99.71 | |
| 3k6k_A | 322 | Esterase/lipase; alpha/beta hydrolase fold; 2.20A | 99.7 | |
| 1jkm_A | 361 | Brefeldin A esterase; serine hydrolase, degradatio | 99.69 | |
| 4ao6_A | 259 | Esterase; hydrolase, thermo label; 1.60A {Unidenti | 99.69 | |
| 3fak_A | 322 | Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Unc | 99.68 | |
| 1ei9_A | 279 | Palmitoyl protein thioesterase 1; alpha/beta hydro | 99.68 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.68 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.68 | |
| 2hfk_A | 319 | Pikromycin, type I polyketide synthase pikaiv; alp | 99.68 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.67 | |
| 3e4d_A | 278 | Esterase D; S-formylglutathione hydrolase, hydrola | 99.65 | |
| 3d59_A | 383 | Platelet-activating factor acetylhydrolase; secret | 99.65 | |
| 3qh4_A | 317 | Esterase LIPW; structural genomics, ssgcid, seattl | 99.65 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.65 | |
| 3icv_A | 316 | Lipase B, CALB; circular permutation, cleavage on | 99.65 | |
| 4fhz_A | 285 | Phospholipase/carboxylesterase; alpha/beta hydrola | 99.65 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.64 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.63 | |
| 3fcx_A | 282 | FGH, esterase D, S-formylglutathione hydrolase; re | 99.63 | |
| 3d0k_A | 304 | Putative poly(3-hydroxybutyrate) depolymerase LPQ; | 99.62 | |
| 3ebl_A | 365 | Gibberellin receptor GID1; alpha/beta hydrolase, l | 99.62 | |
| 3i6y_A | 280 | Esterase APC40077; lipase, structural genomics, PS | 99.61 | |
| 2uz0_A | 263 | Esterase, tributyrin esterase; alpha/beta hydrolas | 99.61 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.6 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 99.6 | |
| 4f21_A | 246 | Carboxylesterase/phospholipase family protein; str | 99.59 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 99.59 | |
| 3ls2_A | 280 | S-formylglutathione hydrolase; psychrophilic organ | 99.58 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 99.57 | |
| 3h2g_A | 397 | Esterase; xanthomonas oryzae PV. oryzae, cell WALL | 99.55 | |
| 2zyr_A | 484 | Lipase, putative; fatty acid, hydrolase; HET: 1PE; | 99.55 | |
| 1jjf_A | 268 | Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-x | 99.54 | |
| 4b6g_A | 283 | Putative esterase; hydrolase, formaldehyde detoxif | 99.52 | |
| 1lns_A | 763 | X-prolyl dipeptidyl aminopetidase; alpha beta hydr | 99.52 | |
| 1w52_X | 452 | Pancreatic lipase related protein 2; detergent, cl | 99.49 | |
| 1bu8_A | 452 | Protein (pancreatic lipase related protein 2); hyd | 99.48 | |
| 1ex9_A | 285 | Lactonizing lipase; alpha-beta hydrolase fold, pho | 99.46 | |
| 1ys1_X | 320 | Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h | 99.46 | |
| 1hpl_A | 449 | Lipase; hydrolase(carboxylic esterase); 2.30A {Equ | 99.45 | |
| 1gpl_A | 432 | RP2 lipase; serine esterase, hydrolase, lipid degr | 99.44 | |
| 2dst_A | 131 | Hypothetical protein TTHA1544; conserved hypotheti | 99.42 | |
| 2x5x_A | 342 | PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE | 99.4 | |
| 1rp1_A | 450 | Pancreatic lipase related protein 1; hydrolase, li | 99.4 | |
| 4ezi_A | 377 | Uncharacterized protein; alpha-beta hydrolases fol | 99.39 | |
| 3n2z_B | 446 | Lysosomal Pro-X carboxypeptidase; alpha/beta hydro | 99.35 | |
| 2px6_A | 316 | Thioesterase domain; thioesaterse domain, orlistat | 99.32 | |
| 3i2k_A | 587 | Cocaine esterase; alpha/beta hydrolase, hydrolase; | 99.31 | |
| 1mpx_A | 615 | Alpha-amino acid ester hydrolase; alpha/beta hydro | 99.31 | |
| 1sfr_A | 304 | Antigen 85-A; alpha/beta hydrolase, structural gen | 99.24 | |
| 1r88_A | 280 | MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBP | 99.23 | |
| 1dqz_A | 280 | 85C, protein (antigen 85-C); fibronectin, structur | 99.23 | |
| 2hih_A | 431 | Lipase 46 kDa form; A1 phospholipase, phospholipid | 99.23 | |
| 3guu_A | 462 | Lipase A; protein structure, hydrolase; HET: 1PE; | 99.21 | |
| 2dsn_A | 387 | Thermostable lipase; T1 lipase, hydrolase; 1.50A { | 99.19 | |
| 1gkl_A | 297 | Endo-1,4-beta-xylanase Y; hydrolase, esterase fami | 99.16 | |
| 3iii_A | 560 | COCE/NOND family hydrolase; structural genomics, c | 99.16 | |
| 2b9v_A | 652 | Alpha-amino acid ester hydrolase; catalytic triad, | 99.14 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 99.08 | |
| 2qm0_A | 275 | BES; alpha-beta structure, structural genomics, PS | 99.05 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 99.01 | |
| 3c8d_A | 403 | Enterochelin esterase; alpha-beta-alpha sandwich, | 98.88 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 98.56 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 98.5 | |
| 3gff_A | 331 | IROE-like serine hydrolase; NP_718593.1, structura | 98.44 | |
| 2gzs_A | 278 | IROE protein; enterobactin, salmochelin, DFP, hydr | 98.27 | |
| 4fol_A | 299 | FGH, S-formylglutathione hydrolase; D-type esteras | 98.15 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 98.11 | |
| 2ogt_A | 498 | Thermostable carboxylesterase EST50; alpha/beta hy | 98.02 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 97.94 | |
| 1qe3_A | 489 | PNB esterase, para-nitrobenzyl esterase; alpha-bet | 97.92 | |
| 1whs_A | 255 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 97.9 | |
| 1tib_A | 269 | Lipase; hydrolase(carboxylic esterase); 1.84A {The | 97.81 | |
| 4g4g_A | 433 | 4-O-methyl-glucuronoyl methylesterase; alpha/beta | 97.68 | |
| 2ha2_A | 543 | ACHE, acetylcholinesterase; hydrolase fold, serine | 97.6 | |
| 4ebb_A | 472 | Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2 | 97.57 | |
| 2fj0_A | 551 | JuvenIle hormone esterase; manduca sexta, alpha-be | 97.48 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 97.45 | |
| 1tgl_A | 269 | Triacyl-glycerol acylhydrolase; carboxylic esteras | 97.42 | |
| 1tia_A | 279 | Lipase; hydrolase(carboxylic esterase); 2.10A {Pen | 97.42 | |
| 3pic_A | 375 | CIP2; alpha/beta hydrolase fold, glucuronoyl ester | 97.4 | |
| 1p0i_A | 529 | Cholinesterase; serine hydrolase, butyrate, hydrol | 97.4 | |
| 1ukc_A | 522 | ESTA, esterase; fungi, A/B hydrolase fold, acetylc | 97.28 | |
| 1ea5_A | 537 | ACHE, acetylcholinesterase; hydrolase, serine hydr | 97.27 | |
| 2h7c_A | 542 | Liver carboxylesterase 1; enzyme, cholesteryl este | 97.22 | |
| 3hc7_A | 254 | Gene 12 protein, GP12; alpha/beta sandwich, cell a | 97.12 | |
| 1llf_A | 534 | Lipase 3; candida cylindracea cholesterol esterase | 97.06 | |
| 4az3_A | 300 | Lysosomal protective protein 32 kDa chain; hydrola | 97.02 | |
| 1dx4_A | 585 | ACHE, acetylcholinesterase; hydrolase, serine este | 97.01 | |
| 1thg_A | 544 | Lipase; hydrolase(carboxylic esterase); HET: NAG N | 96.9 | |
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 96.87 | |
| 1lgy_A | 269 | Lipase, triacylglycerol lipase; hydrolase (carboxy | 96.78 | |
| 1gxs_A | 270 | P-(S)-hydroxymandelonitrIle lyase chain A; inhibit | 96.72 | |
| 2bce_A | 579 | Cholesterol esterase; hydrolase, serine esterase, | 96.58 | |
| 3bix_A | 574 | Neuroligin-1, neuroligin I; esterase domain, alpha | 96.38 | |
| 1uwc_A | 261 | Feruloyl esterase A; hydrolase, serine esterase, x | 96.38 | |
| 1whs_B | 153 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 96.29 | |
| 3qpa_A | 197 | Cutinase; alpha-beta hydrolase fold, esterase, hyd | 96.21 | |
| 3g7n_A | 258 | Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A | 96.12 | |
| 3ngm_A | 319 | Extracellular lipase; secret lipase, hydrolase; 2. | 95.95 | |
| 3uue_A | 279 | LIP1, secretory lipase (family 3); LID-domain, hyd | 95.94 | |
| 3qpd_A | 187 | Cutinase 1; alpha-beta hydrolase fold, esterase, h | 95.9 | |
| 1qoz_A | 207 | AXE, acetyl xylan esterase; hydrolase, xylan degra | 95.58 | |
| 1g66_A | 207 | Acetyl xylan esterase II; serine hydrolase, acetyl | 95.44 | |
| 3o0d_A | 301 | YALI0A20350P, triacylglycerol lipase; alpha/beta-h | 95.44 | |
| 3aja_A | 302 | Putative uncharacterized protein; alpha-beta hydro | 95.3 | |
| 3dcn_A | 201 | Cutinase, cutin hydrolase; catalytic triad, secret | 95.19 | |
| 2czq_A | 205 | Cutinase-like protein; alpha/beta hydrolase fold, | 94.05 | |
| 4az3_B | 155 | Lysosomal protective protein 20 kDa chain; hydrola | 93.67 | |
| 2ory_A | 346 | Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Ph | 92.14 | |
| 1gxs_B | 158 | P-(S)-hydroxymandelonitrIle lyase chain B; inhibit | 91.62 | |
| 2yij_A | 419 | Phospholipase A1-iigamma; hydrolase; 2.00A {Arabid | 86.85 | |
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 83.41 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 83.08 |
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=4.7e-31 Score=250.45 Aligned_cols=249 Identities=14% Similarity=0.102 Sum_probs=167.6
Q ss_pred CccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC-------ChHHHHHH
Q 012190 155 EIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------PFEGLVKF 227 (468)
Q Consensus 155 ~~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-------s~~~~~~d 227 (468)
.+...||.. ++|...|. .++|+|||+||++++...|.++++.|+++|+|+++|+||||.| +++++++|
T Consensus 8 ~~~~~~g~~---l~y~~~G~--~~~p~lvl~hG~~~~~~~w~~~~~~L~~~~~vi~~D~rG~G~S~~~~~~~~~~~~a~d 82 (266)
T 3om8_A 8 FLATSDGAS---LAYRLDGA--AEKPLLALSNSIGTTLHMWDAQLPALTRHFRVLRYDARGHGASSVPPGPYTLARLGED 82 (266)
T ss_dssp EEECTTSCE---EEEEEESC--TTSCEEEEECCTTCCGGGGGGGHHHHHTTCEEEEECCTTSTTSCCCCSCCCHHHHHHH
T ss_pred EEeccCCcE---EEEEecCC--CCCCEEEEeCCCccCHHHHHHHHHHhhcCcEEEEEcCCCCCCCCCCCCCCCHHHHHHH
Confidence 345667766 56766665 2478999999999999999999999998999999999999998 48899999
Q ss_pred HHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCc--hhHHhhHHHH
Q 012190 228 VEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMP--DELHCAVPYL 305 (468)
Q Consensus 228 l~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 305 (468)
+.+++++++ .++++|+||||||.+|+.+|.++|++|+++|++++........ .+........ ..........
T Consensus 83 l~~~l~~l~----~~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 156 (266)
T 3om8_A 83 VLELLDALE----VRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAA--QWDERIAAVLQAEDMSETAAGF 156 (266)
T ss_dssp HHHHHHHTT----CSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCCCSH--HHHHHHHHHHHCSSSHHHHHHH
T ss_pred HHHHHHHhC----CCceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCCchh--HHHHHHHHHHccccHHHHHHHH
Confidence 999999854 4589999999999999999999999999999999865432211 0000000000 0000000000
Q ss_pred hhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEE
Q 012190 306 LSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVL 385 (468)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI 385 (468)
+.......+ .... + ...+.+...+ .......+......+. .......+.++++|+|+|
T Consensus 157 ~~~~~~~~~-------~~~~-~-~~~~~~~~~~-----------~~~~~~~~~~~~~~~~--~~d~~~~l~~i~~P~Lvi 214 (266)
T 3om8_A 157 LGNWFPPAL-------LERA-E-PVVERFRAML-----------MATNRHGLAGSFAAVR--DTDLRAQLARIERPTLVI 214 (266)
T ss_dssp HHHHSCHHH-------HHSC-C-HHHHHHHHHH-----------HTSCHHHHHHHHHHHH--TCBCTTTGGGCCSCEEEE
T ss_pred HHHhcChhh-------hhcC-h-HHHHHHHHHH-----------HhCCHHHHHHHHHHhh--ccchhhHhcCCCCCEEEE
Confidence 000000000 0000 0 0011111100 0011111111111111 111235678999999999
Q ss_pred EeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 386 ASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 386 ~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
+|++|.++|++ ..+.+.+.+|++++++++ +||++++|+|+++++.|. +|++
T Consensus 215 ~G~~D~~~~~~-~~~~l~~~ip~a~~~~i~-~gH~~~~e~p~~~~~~i~--~Fl~ 265 (266)
T 3om8_A 215 AGAYDTVTAAS-HGELIAASIAGARLVTLP-AVHLSNVEFPQAFEGAVL--SFLG 265 (266)
T ss_dssp EETTCSSSCHH-HHHHHHHHSTTCEEEEES-CCSCHHHHCHHHHHHHHH--HHHT
T ss_pred EeCCCCCCCHH-HHHHHHHhCCCCEEEEeC-CCCCccccCHHHHHHHHH--HHhc
Confidence 99999999999 799999999999999998 899999999999999999 5553
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.4e-31 Score=249.20 Aligned_cols=244 Identities=13% Similarity=0.174 Sum_probs=162.2
Q ss_pred eecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC--------ChHHHHHHHHHHHHHHhhcC
Q 012190 168 CPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASS 239 (468)
Q Consensus 168 ~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S--------s~~~~~~dl~~~i~~~~~~~ 239 (468)
+|...|.+..++|+|||+||++++...|.++++.|+++|+|+++|+||||.| +++++++|+.++++.+
T Consensus 4 ~y~~~g~~~~~~~~vvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l---- 79 (268)
T 3v48_A 4 KLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQALVAA---- 79 (268)
T ss_dssp CCEECCCSSTTCCEEEEECCTTCCGGGGHHHHHHHHTTSEEEECCCTTBTTBCCCCCTTCCHHHHHHHHHHHHHHT----
T ss_pred EEEecCCCCCCCCEEEEeCCCCccHHHHHHHHHHHhhcCeEEEECCCCCCCCCCCccccCCHHHHHHHHHHHHHHc----
Confidence 4555554334689999999999999999999999988999999999999988 4789999999999984
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHh-hHHHHhh---hhcCChhh
Q 012190 240 PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHC-AVPYLLS---YVMGDPIK 315 (468)
Q Consensus 240 ~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~ 315 (468)
+.++++|+||||||.+|+.+|.++|++|.++|++++........ ............. ....+.. ...... .
T Consensus 80 ~~~~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 154 (268)
T 3v48_A 80 GIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHT----RRCFQVRERLLYSGGAQAWVEAQPLFLYPA-D 154 (268)
T ss_dssp TCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHSCH-H
T ss_pred CCCCeEEEEecHHHHHHHHHHHhChhhceEEEEeccccccchhh----hHHHHHHHHHHhccchhhhhhhhhhhcCch-h
Confidence 45589999999999999999999999999999999755321110 0000000000000 0000000 000000 0
Q ss_pred HHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCc
Q 012190 316 MAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPS 395 (468)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~ 395 (468)
+. ... ...+.... ............+...+..+.. ......+.++++|+|+|+|++|.++|+
T Consensus 155 ~~-----~~~-----~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~--~d~~~~l~~i~~P~Lii~G~~D~~~p~ 216 (268)
T 3v48_A 155 WM-----AAR-----APRLEAED------ALALAHFQGKNNLLRRLNALKR--ADFSHHADRIRCPVQIICASDDLLVPT 216 (268)
T ss_dssp HH-----HTT-----HHHHHHHH------HHHHHTCCCHHHHHHHHHHHHH--CBCTTTGGGCCSCEEEEEETTCSSSCT
T ss_pred hh-----hcc-----cccchhhH------HHHHhhcCchhHHHHHHHHHhc--cchhhhhhcCCCCeEEEEeCCCcccCH
Confidence 00 000 00000000 0000000011111111111111 112356789999999999999999999
Q ss_pred HHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 396 EDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 396 ~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
+ ..+.+.+.+|++++++++++||++++|+|+++++.|. +|+++
T Consensus 217 ~-~~~~l~~~~p~~~~~~~~~~GH~~~~e~p~~~~~~i~--~fl~~ 259 (268)
T 3v48_A 217 A-CSSELHAALPDSQKMVMPYGGHACNVTDPETFNALLL--NGLAS 259 (268)
T ss_dssp H-HHHHHHHHCSSEEEEEESSCCTTHHHHCHHHHHHHHH--HHHHH
T ss_pred H-HHHHHHHhCCcCeEEEeCCCCcchhhcCHHHHHHHHH--HHHHH
Confidence 9 7999999999999999999999999999999999999 66654
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.2e-30 Score=241.96 Aligned_cols=249 Identities=14% Similarity=0.102 Sum_probs=164.5
Q ss_pred CCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC-------ChHHHHHHHHH
Q 012190 158 KPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------PFEGLVKFVEE 230 (468)
Q Consensus 158 ~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-------s~~~~~~dl~~ 230 (468)
..+|.. ++|...|.+..++|+|||+||++++...|.++++.|+++|+|+++|+||||.| +++++++|+.+
T Consensus 8 ~~~g~~---l~y~~~g~~~~~~~~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~ 84 (266)
T 2xua_A 8 AVNGTE---LHYRIDGERHGNAPWIVLSNSLGTDLSMWAPQVAALSKHFRVLRYDTRGHGHSEAPKGPYTIEQLTGDVLG 84 (266)
T ss_dssp ECSSSE---EEEEEESCSSSCCCEEEEECCTTCCGGGGGGGHHHHHTTSEEEEECCTTSTTSCCCSSCCCHHHHHHHHHH
T ss_pred EECCEE---EEEEEcCCccCCCCeEEEecCccCCHHHHHHHHHHHhcCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHH
Confidence 345554 45666664211278999999999999999999999988899999999999988 48899999999
Q ss_pred HHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCch-hHHhhHHHHhhhh
Q 012190 231 TVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPD-ELHCAVPYLLSYV 309 (468)
Q Consensus 231 ~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 309 (468)
+++++. .++++|+||||||.+|+.+|.++|++|+++|++++....... ..+......... .........+...
T Consensus 85 ~l~~l~----~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (266)
T 2xua_A 85 LMDTLK----IARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSP--EVWVPRAVKARTEGMHALADAVLPRW 158 (266)
T ss_dssp HHHHTT----CCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCSCH--HHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred HHHhcC----CCceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCCch--HHHHHHHHHHHhcChHHHHHHHHHHH
Confidence 999854 458999999999999999999999999999999986543211 000000000000 0000000000000
Q ss_pred cCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCC
Q 012190 310 MGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGK 389 (468)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~ 389 (468)
....+. . ..+. ..+.+...+ .......+......+.. ......+.++++|+|+|+|++
T Consensus 159 ~~~~~~-------~-~~~~-~~~~~~~~~-----------~~~~~~~~~~~~~~~~~--~~~~~~l~~i~~P~lvi~G~~ 216 (266)
T 2xua_A 159 FTADYM-------E-REPV-VLAMIRDVF-----------VHTDKEGYASNCEAIDA--ADLRPEAPGIKVPALVISGTH 216 (266)
T ss_dssp SCHHHH-------H-HCHH-HHHHHHHHH-----------HTSCHHHHHHHHHHHHH--CCCGGGGGGCCSCEEEEEETT
T ss_pred cCcccc-------c-CCHH-HHHHHHHHH-----------hhCCHHHHHHHHHHHhc--cCchhhhccCCCCEEEEEcCC
Confidence 000000 0 0000 000110000 00111111111111111 112356788999999999999
Q ss_pred CCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 390 DNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 390 D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
|.++|++ ..+.+.+.++++++++++ +||++++|+|+++++.|. +|+.+
T Consensus 217 D~~~~~~-~~~~~~~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~--~fl~~ 264 (266)
T 2xua_A 217 DLAATPA-QGRELAQAIAGARYVELD-ASHISNIERADAFTKTVV--DFLTE 264 (266)
T ss_dssp CSSSCHH-HHHHHHHHSTTCEEEEES-CCSSHHHHTHHHHHHHHH--HHHTC
T ss_pred CCcCCHH-HHHHHHHhCCCCEEEEec-CCCCchhcCHHHHHHHHH--HHHHh
Confidence 9999998 799999999999999999 999999999999999999 56654
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A | Back alignment and structure |
|---|
Probab=99.97 E-value=6.1e-29 Score=235.42 Aligned_cols=253 Identities=14% Similarity=0.151 Sum_probs=159.1
Q ss_pred ccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC-------ChHHHHHH
Q 012190 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT-------PFEGLVKF 227 (468)
Q Consensus 156 ~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S-------s~~~~~~d 227 (468)
+...||.. ++|...|+ +++|||+||++++...|..+++.| .++|+|+++|+||||.| +++++++|
T Consensus 3 ~~~~~g~~---l~y~~~G~----g~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~a~d 75 (271)
T 3ia2_A 3 FVAKDGTQ---IYFKDWGS----GKPVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYDTFADD 75 (271)
T ss_dssp EECTTSCE---EEEEEESS----SSEEEEECCTTCCGGGGHHHHHHHHTTTCEEEEECCTTSTTSCCCSSCCSHHHHHHH
T ss_pred EEcCCCCE---EEEEccCC----CCeEEEECCCCCcHHHHHHHHHHHHhCCceEEEecCCCCccCCCCCCCCCHHHHHHH
Confidence 45667766 56666775 678999999999999999999999 46899999999999998 37899999
Q ss_pred HHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhC-CCCceEEEEeCCCCCCCCCC--cCc-c-hHHHhhCchhHHhhH
Q 012190 228 VEETVRREHASSPEKPIYLVGDSFGGCLALAVAARN-PTIDLILILSNPATSFGRSQ--LQP-L-FPILKAMPDELHCAV 302 (468)
Q Consensus 228 l~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~-P~~v~~lVli~p~~~~~~~~--~~~-~-~~~~~~~~~~~~~~~ 302 (468)
+.++++++. .++++|+||||||.+++.+++++ |+++.++|++++........ ... . ......+........
T Consensus 76 ~~~~l~~l~----~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (271)
T 3ia2_A 76 IAQLIEHLD----LKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLKDR 151 (271)
T ss_dssp HHHHHHHHT----CCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhC----CCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccCCccccCCCCCcccccHHHHHHHHHHHHhhH
Confidence 999999864 45899999999999777666665 89999999998754321110 000 0 011110000000000
Q ss_pred HHHhhhhcCChhhHHHHhhc--cCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCc
Q 012190 303 PYLLSYVMGDPIKMAMVNIE--NRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKA 380 (468)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~ 380 (468)
...+..+ ...+.... ...... ......... .. ............+. .......+.++++
T Consensus 152 ~~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~---------~~--~~~~~~~~~~~~~~--~~~~~~~l~~i~~ 212 (271)
T 3ia2_A 152 AQFISDF-----NAPFYGINKGQVVSQG-VQTQTLQIA---------LL--ASLKATVDCVTAFA--ETDFRPDMAKIDV 212 (271)
T ss_dssp HHHHHHH-----HHHHHTGGGTCCCCHH-HHHHHHHHH---------HH--SCHHHHHHHHHHHH--HCBCHHHHTTCCS
T ss_pred HHHHHHh-----hHhhhccccccccCHH-HHHHHHhhh---------hh--ccHHHHHHHHHHhh--ccCCcccccCCCC
Confidence 0000000 00000000 000000 000000000 00 00000000011111 1112345688999
Q ss_pred eEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 381 EVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 381 PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
|+|+|+|++|.++|++...+.+.+.++++++++++++||++++|+|+++++.|. +|++
T Consensus 213 P~Lvi~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~--~Fl~ 270 (271)
T 3ia2_A 213 PTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDLL--AFLK 270 (271)
T ss_dssp CEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHHH--HHHT
T ss_pred CEEEEEeCCCCcCChHHHHHHHHHhCCCceEEEEcCCCCcccccCHHHHHHHHH--HHhh
Confidence 999999999999999822456677889999999999999999999999999999 5664
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-28 Score=236.59 Aligned_cols=240 Identities=17% Similarity=0.139 Sum_probs=158.7
Q ss_pred eeecCCCCCCCCCCeEEEeCCCC---CchhhHHHhH-hhhcCCeEEEEecCCCCCCCC--------hHHHHHHHHHHHHH
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGID---GLGLGLILHH-KPLGKAFEVRCLHIPVYDRTP--------FEGLVKFVEETVRR 234 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~---~s~~~~~~~~-~~L~~~~~V~~~D~~G~G~Ss--------~~~~~~dl~~~i~~ 234 (468)
++|...|+ +|+|||+||++ ++...|..++ +.|++.|+|+++|+||||.|+ ++++++|+.+++++
T Consensus 25 l~y~~~G~----g~~vvllHG~~~~~~~~~~w~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~a~dl~~~l~~ 100 (286)
T 2puj_A 25 IHYNEAGN----GETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDA 100 (286)
T ss_dssp EEEEEECC----SSEEEEECCCSTTCCHHHHHTTTHHHHHHTTCEEEEECCTTSTTSCCCCCSSCHHHHHHHHHHHHHHH
T ss_pred EEEEecCC----CCcEEEECCCCCCCCcHHHHHHHHHHHHhccCEEEEECCCCCCCCCCCCCcCcCHHHHHHHHHHHHHH
Confidence 56666665 67999999998 8888999999 999878999999999999883 68889999999998
Q ss_pred HhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCc-chHHHhhCchhHH----hhHHHHhhhh
Q 012190 235 EHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQP-LFPILKAMPDELH----CAVPYLLSYV 309 (468)
Q Consensus 235 ~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~ 309 (468)
+ +.++++|+||||||.+|+.+|.++|++|+++|+++|..... ..+.. ............. ......+...
T Consensus 101 l----~~~~~~lvGhS~GG~va~~~A~~~p~~v~~lvl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (286)
T 2puj_A 101 L----DIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGP-SMFAPMPMEGIKLLFKLYAEPSYETLKQMLQVF 175 (286)
T ss_dssp T----TCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCC-CSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHHH
T ss_pred h----CCCceEEEEECHHHHHHHHHHHhChHhhheEEEECccccCC-CcccccchhhHHHHHHHhhCCcHHHHHHHHHHH
Confidence 4 44589999999999999999999999999999999865321 11110 0000000000000 0000111111
Q ss_pred cCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHH---hHHHhhhcccCCceEEEEE
Q 012190 310 MGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSA---SAYANSRLHAVKAEVLVLA 386 (468)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~l~~i~~PvLlI~ 386 (468)
..++ ...... .......... ............+... .......+.++++|+|+|+
T Consensus 176 ~~~~---------~~~~~~-~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~ 233 (286)
T 2puj_A 176 LYDQ---------SLITEE-LLQGRWEAIQ------------RQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITW 233 (286)
T ss_dssp CSCG---------GGCCHH-HHHHHHHHHH------------HCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEE
T ss_pred hcCC---------ccCCHH-HHHHHHHHhh------------cCHHHHHHHHHHHhhhhccccchhhHHhhcCCCEEEEE
Confidence 1000 000000 0000000000 0000011001101100 0112356788999999999
Q ss_pred eCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 387 SGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 387 G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
|++|.++|++ ..+.+.+.+|++++++++++||++++|+|+++++.|. +|+.
T Consensus 234 G~~D~~~p~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~ 284 (286)
T 2puj_A 234 GRDDRFVPLD-HGLKLLWNIDDARLHVFSKCGAWAQWEHADEFNRLVI--DFLR 284 (286)
T ss_dssp ETTCSSSCTH-HHHHHHHHSSSEEEEEESSCCSCHHHHTHHHHHHHHH--HHHH
T ss_pred ECCCCccCHH-HHHHHHHHCCCCeEEEeCCCCCCccccCHHHHHHHHH--HHHh
Confidence 9999999999 7999999999999999999999999999999999999 5654
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A | Back alignment and structure |
|---|
Probab=99.96 E-value=5.9e-29 Score=239.12 Aligned_cols=251 Identities=16% Similarity=0.124 Sum_probs=163.1
Q ss_pred ccCCCC-CCceeeeecCCCCCCCCCCeEEEeCCCC---CchhhHHHhHhhhcCCeEEEEecCCCCCCCC--------hHH
Q 012190 156 IIKPDG-GPPRWFCPVDCGRPLKGSPTLLFLPGID---GLGLGLILHHKPLGKAFEVRCLHIPVYDRTP--------FEG 223 (468)
Q Consensus 156 ~~~~dg-~~~~~~~y~~~g~~~~~~p~lV~lHG~~---~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss--------~~~ 223 (468)
++..+| .. ++|...|+. .+|+|||+||++ ++...|.++++.|++.|+|+++|+||||.|+ +++
T Consensus 17 ~~~~~g~~~---l~y~~~G~g--~~~~vvllHG~~pg~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~ 91 (291)
T 2wue_A 17 EVDVDGPLK---LHYHEAGVG--NDQTVVLLHGGGPGAASWTNFSRNIAVLARHFHVLAVDQPGYGHSDKRAEHGQFNRY 91 (291)
T ss_dssp EEESSSEEE---EEEEEECTT--CSSEEEEECCCCTTCCHHHHTTTTHHHHTTTSEEEEECCTTSTTSCCCSCCSSHHHH
T ss_pred EEEeCCcEE---EEEEecCCC--CCCcEEEECCCCCccchHHHHHHHHHHHHhcCEEEEECCCCCCCCCCCCCCCcCHHH
Confidence 344455 44 466666651 235999999998 8888999999999888999999999999883 688
Q ss_pred HHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCc-chHHHhhCchhHH---
Q 012190 224 LVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQP-LFPILKAMPDELH--- 299 (468)
Q Consensus 224 ~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~-~~~~~~~~~~~~~--- 299 (468)
+++++.++++++. .++++|+||||||.+|+.+|.++|++|+++|++++..... ..+.. .......+.....
T Consensus 92 ~a~dl~~~l~~l~----~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 166 (291)
T 2wue_A 92 AAMALKGLFDQLG----LGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSI-NLFAPDPTEGVKRLSKFSVAPT 166 (291)
T ss_dssp HHHHHHHHHHHHT----CCSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSSSCC-CSSSCSSCHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHhC----CCCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCCCCc-cccccccchhhHHHHHHhccCC
Confidence 9999999999864 3489999999999999999999999999999999865321 11110 0000000000000
Q ss_pred -hhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHh------HHHh
Q 012190 300 -CAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSAS------AYAN 372 (468)
Q Consensus 300 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~------~~~~ 372 (468)
......+..+..++ ...+.. ........+ ................. ....
T Consensus 167 ~~~~~~~~~~~~~~~---------~~~~~~-~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (291)
T 2wue_A 167 RENLEAFLRVMVYDK---------NLITPE-LVDQRFALA-------------STPESLTATRAMGKSFAGADFEAGMMW 223 (291)
T ss_dssp HHHHHHHHHTSCSSG---------GGSCHH-HHHHHHHHH-------------TSHHHHHHHHHHHHHHTSTTGGGGCGG
T ss_pred HHHHHHHHHHhccCc---------ccCCHH-HHHHHHHHh-------------cCchHHHHHHHHHhhccccccccchhH
Confidence 00000111110000 000000 000000000 00111111111110000 0011
Q ss_pred hhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCccccc
Q 012190 373 SRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRS 442 (468)
Q Consensus 373 ~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r~ 442 (468)
..+.++++|+|+|+|++|.++|++ ..+.+.+.+|++++++++++||++++|+|+++++.|. +|+.++
T Consensus 224 ~~l~~i~~P~lvi~G~~D~~~~~~-~~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~~~ 290 (291)
T 2wue_A 224 REVYRLRQPVLLIWGREDRVNPLD-GALVALKTIPRAQLHVFGQCGHWVQVEKFDEFNKLTI--EFLGGG 290 (291)
T ss_dssp GTGGGCCSCEEEEEETTCSSSCGG-GGHHHHHHSTTEEEEEESSCCSCHHHHTHHHHHHHHH--HHTTC-
T ss_pred HHHhhCCCCeEEEecCCCCCCCHH-HHHHHHHHCCCCeEEEeCCCCCChhhhCHHHHHHHHH--HHHhcc
Confidence 567889999999999999999998 6889999999999999999999999999999999999 676553
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-28 Score=235.99 Aligned_cols=252 Identities=16% Similarity=0.180 Sum_probs=160.7
Q ss_pred cCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCch---hhHHHhHhhhcCCeEEEEecCCCCCCC--------ChHHHH
Q 012190 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLG---LGLILHHKPLGKAFEVRCLHIPVYDRT--------PFEGLV 225 (468)
Q Consensus 157 ~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~---~~~~~~~~~L~~~~~V~~~D~~G~G~S--------s~~~~~ 225 (468)
+..+|.. ++|...|+ +|+|||+||++.+. ..|..+++.|+++|+|+++|+||||.| ++++++
T Consensus 10 ~~~~g~~---l~y~~~G~----g~~vvllHG~~~~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~a 82 (282)
T 1iup_A 10 ILAAGVL---TNYHDVGE----GQPVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFTDRPENYNYSKDSWV 82 (282)
T ss_dssp EEETTEE---EEEEEECC----SSEEEEECCCCTTCCHHHHHTTTHHHHTTTSEEEEECCTTSTTSCCCTTCCCCHHHHH
T ss_pred EEECCEE---EEEEecCC----CCeEEEECCCCCCccHHHHHHHHHHhhccCCEEEEECCCCCCCCCCCCCCCCCHHHHH
Confidence 3445544 56666675 67899999987544 378888999988999999999999987 378999
Q ss_pred HHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHH
Q 012190 226 KFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYL 305 (468)
Q Consensus 226 ~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (468)
+|+.++++++ +.++++|+||||||.+|+.+|.++|++|+++|++++...... ............+. . .....+
T Consensus 83 ~dl~~~l~~l----~~~~~~lvGhS~GG~ia~~~A~~~P~~v~~lvl~~~~~~~~~-~~~~~~~~~~~~~~-~-~~~~~~ 155 (282)
T 1iup_A 83 DHIIGIMDAL----EIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFD-VTEGLNAVWGYTPS-I-ENMRNL 155 (282)
T ss_dssp HHHHHHHHHT----TCCSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESCCCSCCC-CCHHHHHHHTCCSC-H-HHHHHH
T ss_pred HHHHHHHHHh----CCCceEEEEECHhHHHHHHHHHHChHHHHHHHeeCCccCCCC-CCHHHHHHhcCCCc-H-HHHHHH
Confidence 9999999984 445899999999999999999999999999999998653211 10000001100000 0 001111
Q ss_pred hhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEE
Q 012190 306 LSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVL 385 (468)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI 385 (468)
+.....++ ...... ..+......... ................+ ..... .....+.++++|+|+|
T Consensus 156 ~~~~~~~~---------~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~-~~~~~l~~i~~P~lii 219 (282)
T 1iup_A 156 LDIFAYDR---------SLVTDE-LARLRYEASIQP-GFQESFSSMFPEPRQRW----IDALA-SSDEDIKTLPNETLII 219 (282)
T ss_dssp HHHHCSSG---------GGCCHH-HHHHHHHHHTST-THHHHHHHHSCSSTHHH----HHHHC-CCHHHHTTCCSCEEEE
T ss_pred HHHhhcCc---------ccCCHH-HHHHHHhhccCh-HHHHHHHHHHhcccccc----ccccc-cchhhhhhcCCCEEEE
Confidence 11111111 000000 000000000000 00000000000000000 00000 0014568899999999
Q ss_pred EeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 386 ASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 386 ~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
+|++|.++|++ ..+.+.+.++++++++++++||++++|+|+++++.|. +|+.+
T Consensus 220 ~G~~D~~~p~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~~ 272 (282)
T 1iup_A 220 HGREDQVVPLS-SSLRLGELIDRAQLHVFGRCGHWTQIEQTDRFNRLVV--EFFNE 272 (282)
T ss_dssp EETTCSSSCHH-HHHHHHHHCTTEEEEEESSCCSCHHHHSHHHHHHHHH--HHHHT
T ss_pred ecCCCCCCCHH-HHHHHHHhCCCCeEEEECCCCCCccccCHHHHHHHHH--HHHhc
Confidence 99999999999 6899999999999999999999999999999999999 67765
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-29 Score=237.80 Aligned_cols=243 Identities=12% Similarity=0.053 Sum_probs=157.7
Q ss_pred eecCCCCC-CCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC------ChHHHHHHHHHHHHHHhhcCC
Q 012190 168 CPVDCGRP-LKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT------PFEGLVKFVEETVRREHASSP 240 (468)
Q Consensus 168 ~y~~~g~~-~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S------s~~~~~~dl~~~i~~~~~~~~ 240 (468)
+|...|.+ ..++|+|||+||++++...|..+++.|++.|+|+++|+||||.| +++++++|+.++++.+.
T Consensus 4 ~y~~~G~~~~~~~~~vvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~~a~dl~~~l~~l~---- 79 (255)
T 3bf7_A 4 NIRAQTAQNQHNNSPIVLVHGLFGSLDNLGVLARDLVNDHNIIQVDVRNHGLSPREPVMNYPAMAQDLVDTLDALQ---- 79 (255)
T ss_dssp CEEEECCSSCCCCCCEEEECCTTCCTTTTHHHHHHHTTTSCEEEECCTTSTTSCCCSCCCHHHHHHHHHHHHHHHT----
T ss_pred eeeecCccccCCCCCEEEEcCCcccHhHHHHHHHHHHhhCcEEEecCCCCCCCCCCCCcCHHHHHHHHHHHHHHcC----
Confidence 45555532 11478899999999999999999999988899999999999998 47899999999999864
Q ss_pred CCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHh
Q 012190 241 EKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVN 320 (468)
Q Consensus 241 ~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (468)
.++++|+||||||.+|+.+|.++|++|+++|++++........ ........+. ........... .....
T Consensus 80 ~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~p~~~~~~--~~~~~~~~~~--------~~~~~~~~~~~-~~~~~ 148 (255)
T 3bf7_A 80 IDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVR--RHDEIFAAIN--------AVSESDAQTRQ-QAAAI 148 (255)
T ss_dssp CSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCCSC--CCHHHHHHHH--------HHHHSCCCSHH-HHHHH
T ss_pred CCCeeEEeeCccHHHHHHHHHhCcHhhccEEEEcCCcccCCcc--cHHHHHHHHH--------hccccccccHH-HHHHH
Confidence 3489999999999999999999999999999998643221111 0111111000 00000000000 00000
Q ss_pred hccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHH
Q 012190 321 IENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAK 400 (468)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~ 400 (468)
.............+...+.. .. .......+.. .+.... ....+.++++|+|+|+|++|.+++++ ..+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~---~~~~~~--~~~~l~~i~~P~l~i~G~~D~~~~~~-~~~ 215 (255)
T 3bf7_A 149 MRQHLNEEGVIQFLLKSFVD-----GE--WRFNVPVLWD---QYPHIV--GWEKIPAWDHPALFIPGGNSPYVSEQ-YRD 215 (255)
T ss_dssp HTTTCCCHHHHHHHHTTEET-----TE--ESSCHHHHHH---THHHHH--CCCCCCCCCSCEEEECBTTCSTTCGG-GHH
T ss_pred HhhhcchhHHHHHHHHhccC-----Cc--eeecHHHHHh---hhhhcc--ccccccccCCCeEEEECCCCCCCCHH-HHH
Confidence 00001100001111111000 00 0000001100 000000 01246789999999999999999998 689
Q ss_pred HHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 401 RLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 401 ~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
.+.+.++++++++++++||++++|+|+++++.|. +|+.
T Consensus 216 ~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~ 253 (255)
T 3bf7_A 216 DLLAQFPQARAHVIAGAGHWVHAEKPDAVLRAIR--RYLN 253 (255)
T ss_dssp HHHHHCTTEEECCBTTCCSCHHHHCHHHHHHHHH--HHHH
T ss_pred HHHHHCCCCeEEEeCCCCCccccCCHHHHHHHHH--HHHh
Confidence 9999999999999999999999999999999999 5654
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A | Back alignment and structure |
|---|
Probab=99.96 E-value=5.5e-29 Score=237.11 Aligned_cols=243 Identities=11% Similarity=0.080 Sum_probs=157.0
Q ss_pred eeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhc-CCeEEEEecCCCCCCC-------ChHHHHHHHHHHHHHHhhc
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHAS 238 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~-~~~~V~~~D~~G~G~S-------s~~~~~~dl~~~i~~~~~~ 238 (468)
++|...|+ +++|||+||++++...|..+++.|. ++|+|+++|+||||.| +++++++|+.++++++.
T Consensus 15 l~y~~~g~----g~pvvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~a~dl~~~l~~l~-- 88 (277)
T 1brt_A 15 LYYEDHGT----GQPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNTVLETLD-- 88 (277)
T ss_dssp EEEEEECS----SSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHHT--
T ss_pred EEEEEcCC----CCeEEEECCCCCcHHHHHHHHHHHhhCCCEEEEeCCCCCCCCCCCCCCccHHHHHHHHHHHHHHhC--
Confidence 45666664 5679999999999999999999995 4799999999999998 47899999999999864
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHhCCC-CceEEEEeCCCCCCCCCCcCc-----chHHHhhCchhHH----hhHHHHhhh
Q 012190 239 SPEKPIYLVGDSFGGCLALAVAARNPT-IDLILILSNPATSFGRSQLQP-----LFPILKAMPDELH----CAVPYLLSY 308 (468)
Q Consensus 239 ~~~~~i~LvGhS~GG~ia~~~a~~~P~-~v~~lVli~p~~~~~~~~~~~-----~~~~~~~~~~~~~----~~~~~~~~~ 308 (468)
.++++|+||||||.+|+.+|+++|+ +|+++|++++........... .......+..... .........
T Consensus 89 --~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (277)
T 1brt_A 89 --LQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFND 166 (277)
T ss_dssp --CCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred --CCceEEEEECccHHHHHHHHHHcCcceEEEEEEecCcCccccccccCccccccHHHHHHHHHHHhcCchhhHHHHHHH
Confidence 3489999999999999999999999 999999999854321111000 0000000000000 000000000
Q ss_pred hcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeC
Q 012190 309 VMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASG 388 (468)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~ 388 (468)
+.... .......+.. ..+.+.+... ..........+..........+.++++|+|+|+|+
T Consensus 167 ~~~~~-----~~~~~~~~~~-~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~ 226 (277)
T 1brt_A 167 FYNLD-----ENLGTRISEE-AVRNSWNTAA--------------SGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGT 226 (277)
T ss_dssp HTTHH-----HHBTTTBCHH-HHHHHHHHHH--------------HSCHHHHHHGGGGTTCCCTTTGGGCCSCEEEEEET
T ss_pred Hhhcc-----ccccccCCHH-HHHHHHHHHh--------------ccchHHHHHHHHHHhccchhhcccCCCCeEEEecC
Confidence 00000 0000001100 0111110000 00000000000000011124567899999999999
Q ss_pred CCCCCCcHHHH-HHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 389 KDNMLPSEDEA-KRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 389 ~D~~v~~~~~~-~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
+|.++|++ .. +.+.+.++++++++++++||++++|+|+++++.|. +|+.
T Consensus 227 ~D~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~ 276 (277)
T 1brt_A 227 GDRTLPIE-NTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTALL--AFLA 276 (277)
T ss_dssp TCSSSCGG-GTHHHHHHHCTTSEEEEETTCCTTHHHHTHHHHHHHHH--HHHH
T ss_pred CCccCChH-HHHHHHHHHCCCCcEEEeCCCCcchhhhCHHHHHHHHH--HHHh
Confidence 99999988 57 89999999999999999999999999999999999 5553
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 | Back alignment and structure |
|---|
Probab=99.96 E-value=3.5e-28 Score=233.93 Aligned_cols=250 Identities=14% Similarity=0.090 Sum_probs=155.1
Q ss_pred CCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCC-----------hHHHHH
Q 012190 158 KPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP-----------FEGLVK 226 (468)
Q Consensus 158 ~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss-----------~~~~~~ 226 (468)
..+|.. ++|...|+ +|+|||+||++++...|.++++.|++.|+|+++|+||||.|+ ++++++
T Consensus 15 ~~~g~~---l~y~~~G~----g~~lvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~ 87 (294)
T 1ehy_A 15 QLPDVK---IHYVREGA----GPTLLLLHGWPGFWWEWSKVIGPLAEHYDVIVPDLRGFGDSEKPDLNDLSKYSLDKAAD 87 (294)
T ss_dssp ECSSCE---EEEEEEEC----SSEEEEECCSSCCGGGGHHHHHHHHTTSEEEEECCTTSTTSCCCCTTCGGGGCHHHHHH
T ss_pred EECCEE---EEEEEcCC----CCEEEEECCCCcchhhHHHHHHHHhhcCEEEecCCCCCCCCCCCccccccCcCHHHHHH
Confidence 445554 56666664 689999999999999999999999888999999999999873 567899
Q ss_pred HHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHh
Q 012190 227 FVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLL 306 (468)
Q Consensus 227 dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (468)
|+.++++++ +.++++|+||||||.+|+.+|.++|++|+++|++++.............. ........... +.+.
T Consensus 88 dl~~ll~~l----~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~ 161 (294)
T 1ehy_A 88 DQAALLDAL----GIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGH-VHESWYSQFHQ-LDMA 161 (294)
T ss_dssp HHHHHHHHT----TCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC------------CCHHHHHTT-CHHH
T ss_pred HHHHHHHHc----CCCCEEEEEeChhHHHHHHHHHhChhheeEEEEecCCCCCcchhhccchh-ccCceEEEecC-cchh
Confidence 999999984 44589999999999999999999999999999999743211110000000 00000000000 0000
Q ss_pred hhhc-CCh------hhHHHHhhc---cCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHH-----
Q 012190 307 SYVM-GDP------IKMAMVNIE---NRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYA----- 371 (468)
Q Consensus 307 ~~~~-~~~------~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----- 371 (468)
.... ... ......... ...+.+. .+.+...+. ...........+.......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~ 227 (294)
T 1ehy_A 162 VEVVGSSREVCKKYFKHFFDHWSYRDELLTEEE-LEVHVDNCM-------------KPDNIHGGFNYYRANIRPDAALWT 227 (294)
T ss_dssp HHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHH-HHHHHHHHT-------------STTHHHHHHHHHHHHSSSSCCCCC
T ss_pred HHHhccchhHHHHHHHHHhhcccCCCCCCCHHH-HHHHHHHhc-------------CCcccchHHHHHHHHHhhhhhhcC
Confidence 0000 000 000000000 0111100 011111000 0011100011111100000
Q ss_pred hhhcccCCceEEEEEeCCCCCCCc-HHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHh
Q 012190 372 NSRLHAVKAEVLVLASGKDNMLPS-EDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (468)
Q Consensus 372 ~~~l~~i~~PvLlI~G~~D~~v~~-~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~ 435 (468)
...+..+++|+|+|+|++|.++|. . ..+.+.+.++++++++++++||++++|+|+++++.|.+
T Consensus 228 ~~~l~~i~~P~Lvi~G~~D~~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 291 (294)
T 1ehy_A 228 DLDHTMSDLPVTMIWGLGDTCVPYAP-LIEFVPKYYSNYTMETIEDCGHFLMVEKPEIAIDRIKT 291 (294)
T ss_dssp TGGGSCBCSCEEEEEECCSSCCTTHH-HHHHHHHHBSSEEEEEETTCCSCHHHHCHHHHHHHHHH
T ss_pred CcccCcCCCCEEEEEeCCCCCcchHH-HHHHHHHHcCCCceEEeCCCCCChhhhCHHHHHHHHHH
Confidence 013448999999999999999984 5 57888889999999999999999999999999999994
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-28 Score=235.40 Aligned_cols=243 Identities=10% Similarity=0.067 Sum_probs=156.1
Q ss_pred eeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC-------ChHHHHHHHHHHHHHHhhc
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHAS 238 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S-------s~~~~~~dl~~~i~~~~~~ 238 (468)
++|...|+ +++|||+||++++...|..+++.| ..+|+|+++|+||||.| +++++++|+.++++++
T Consensus 19 l~y~~~G~----g~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~l--- 91 (281)
T 3fob_A 19 IYYEDHGT----GKPVVLIHGWPLSGRSWEYQVPALVEAGYRVITYDRRGFGKSSQPWEGYEYDTFTSDLHQLLEQL--- 91 (281)
T ss_dssp EEEEEESS----SEEEEEECCTTCCGGGGTTTHHHHHHTTEEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHT---
T ss_pred EEEEECCC----CCeEEEECCCCCcHHHHHHHHHHHHhCCCEEEEeCCCCCCCCCCCccccCHHHHHHHHHHHHHHc---
Confidence 56777776 678999999999999999999999 56799999999999998 4789999999999984
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHh-CCCCceEEEEeCCCCCCCCCC--cCc--ch-HHHhhCchhHHh----hHHHHhhh
Q 012190 239 SPEKPIYLVGDSFGGCLALAVAAR-NPTIDLILILSNPATSFGRSQ--LQP--LF-PILKAMPDELHC----AVPYLLSY 308 (468)
Q Consensus 239 ~~~~~i~LvGhS~GG~ia~~~a~~-~P~~v~~lVli~p~~~~~~~~--~~~--~~-~~~~~~~~~~~~----~~~~~~~~ 308 (468)
+.++++|+||||||.+++.++++ +|++++++|++++........ ... .. .....+...... ....+...
T Consensus 92 -~~~~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (281)
T 3fob_A 92 -ELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGALDDATIETFKSGVINDRLAFLDEFTKG 170 (281)
T ss_dssp -TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSSTTCSBCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCcEEEEEECccHHHHHHHHHHccccceeEEEEecCCCcchhccccccccccchhHHHHHHHHhhhhHHHHHHHHHHH
Confidence 45589999999999988877766 489999999998754221110 000 00 001100000000 00000000
Q ss_pred hcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeC
Q 012190 309 VMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASG 388 (468)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~ 388 (468)
+..... ........ ....... ................+. .......+.++++|+|+|+|+
T Consensus 171 ~~~~~~------~~~~~~~~-~~~~~~~-----------~~~~~~~~~~~~~~~~~~--~~d~~~~l~~i~~P~Lii~G~ 230 (281)
T 3fob_A 171 FFAAGD------RTDLVSES-FRLYNWD-----------IAAGASPKGTLDCITAFS--KTDFRKDLEKFNIPTLIIHGD 230 (281)
T ss_dssp HTCBTT------BCCSSCHH-HHHHHHH-----------HHHTSCHHHHHHHHHHHH--HCCCHHHHTTCCSCEEEEEET
T ss_pred hccccc------ccccchHH-HHHHhhh-----------hhcccChHHHHHHHHHcc--ccchhhhhhhcCCCEEEEecC
Confidence 000000 00000000 0000000 000000111111111111 111235678999999999999
Q ss_pred CCCCCCcHHHH-HHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 389 KDNMLPSEDEA-KRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 389 ~D~~v~~~~~~-~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
+|.++|++ .. +.+.+.+|++++++++++||++++|+|+++++.|. +|++
T Consensus 231 ~D~~~p~~-~~~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~~~~~i~--~Fl~ 280 (281)
T 3fob_A 231 SDATVPFE-YSGKLTHEAIPNSKVALIKGGPHGLNATHAKEFNEALL--LFLK 280 (281)
T ss_dssp TCSSSCGG-GTHHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHHH--HHHC
T ss_pred CCCCcCHH-HHHHHHHHhCCCceEEEeCCCCCchhhhhHHHHHHHHH--HHhh
Confidence 99999988 44 77788999999999999999999999999999999 5653
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=8.5e-29 Score=235.14 Aligned_cols=235 Identities=13% Similarity=0.125 Sum_probs=153.6
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC-----------ChHHHHHHHHHHHHHHhhcCCCCcEEE
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-----------PFEGLVKFVEETVRREHASSPEKPIYL 246 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-----------s~~~~~~dl~~~i~~~~~~~~~~~i~L 246 (468)
++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|+.++++++ ..++++|
T Consensus 19 g~~~vvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l----~~~~~~l 94 (271)
T 1wom_A 19 GKASIMFAPGFGCDQSVWNAVAPAFEEDHRVILFDYVGSGHSDLRAYDLNRYQTLDGYAQDVLDVCEAL----DLKETVF 94 (271)
T ss_dssp CSSEEEEECCTTCCGGGGTTTGGGGTTTSEEEECCCSCCSSSCCTTCCTTGGGSHHHHHHHHHHHHHHT----TCSCEEE
T ss_pred CCCcEEEEcCCCCchhhHHHHHHHHHhcCeEEEECCCCCCCCCCCcccccccccHHHHHHHHHHHHHHc----CCCCeEE
Confidence 357999999999999999999999988999999999999987 3567899999999884 4458999
Q ss_pred EEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCC--cC-cch-HHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhc
Q 012190 247 VGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQ--LQ-PLF-PILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIE 322 (468)
Q Consensus 247 vGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~--~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (468)
+||||||.+|+.+|.++|++|+++|++++........ +. ... .....+..........+...+ . .....
T Consensus 95 vGhS~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~--~~~~~ 167 (271)
T 1wom_A 95 VGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNYIGWATVF-----A--ATVLN 167 (271)
T ss_dssp EEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHH-----H--HHHHC
T ss_pred EEeCHHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCchhccCCCHHHHHHHHHHHhhhHHHHHHHH-----H--HHHhc
Confidence 9999999999999999999999999999864321111 00 000 000000000000000000000 0 00000
Q ss_pred cCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHH
Q 012190 323 NRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRL 402 (468)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l 402 (468)
.... ....+.+...+.. .............. .......+.++++|+|+|+|++|.++|++ ..+.+
T Consensus 168 ~~~~-~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~--~~~~~~~l~~i~~P~lvi~G~~D~~~~~~-~~~~~ 232 (271)
T 1wom_A 168 QPDR-PEIKEELESRFCS-----------TDPVIARQFAKAAF--FSDHREDLSKVTVPSLILQCADDIIAPAT-VGKYM 232 (271)
T ss_dssp CTTC-HHHHHHHHHHHHH-----------SCHHHHHHHHHHHH--SCCCHHHHTTCCSCEEEEEEETCSSSCHH-HHHHH
T ss_pred CCCc-hHHHHHHHHHHhc-----------CCcHHHHHHHHHHh--CcchHHhccccCCCEEEEEcCCCCcCCHH-HHHHH
Confidence 0000 0111111111100 00000000000000 01112456789999999999999999998 68999
Q ss_pred HHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 403 NNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 403 ~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
.+.++++++++++++||++++|+|+++++.|. +|+.
T Consensus 233 ~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~ 268 (271)
T 1wom_A 233 HQHLPYSSLKQMEARGHCPHMSHPDETIQLIG--DYLK 268 (271)
T ss_dssp HHHSSSEEEEEEEEESSCHHHHCHHHHHHHHH--HHHH
T ss_pred HHHCCCCEEEEeCCCCcCccccCHHHHHHHHH--HHHH
Confidence 99999999999999999999999999999999 5654
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=99.96 E-value=4.5e-28 Score=231.63 Aligned_cols=250 Identities=15% Similarity=0.155 Sum_probs=160.0
Q ss_pred cCCCCCCceeeeecCCCCCCCCCCeEEEeCCCC---CchhhHHHhHhhhcCCeEEEEecCCCCCCC--------ChHHH-
Q 012190 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGID---GLGLGLILHHKPLGKAFEVRCLHIPVYDRT--------PFEGL- 224 (468)
Q Consensus 157 ~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~---~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S--------s~~~~- 224 (468)
+..+|.. ++|...|.+ +.|+|||+||++ ++...|..+++.|.++|+|+++|+||||.| +++++
T Consensus 12 ~~~~g~~---l~y~~~g~~--g~p~vvllHG~~~~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 86 (285)
T 1c4x_A 12 FPSGTLA---SHALVAGDP--QSPAVVLLHGAGPGAHAASNWRPIIPDLAENFFVVAPDLIGFGQSEYPETYPGHIMSWV 86 (285)
T ss_dssp ECCTTSC---EEEEEESCT--TSCEEEEECCCSTTCCHHHHHGGGHHHHHTTSEEEEECCTTSTTSCCCSSCCSSHHHHH
T ss_pred EEECCEE---EEEEecCCC--CCCEEEEEeCCCCCCcchhhHHHHHHHHhhCcEEEEecCCCCCCCCCCCCcccchhhhh
Confidence 3445555 466666631 344599999998 788899999999987899999999999987 36788
Q ss_pred ---HHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhh
Q 012190 225 ---VKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCA 301 (468)
Q Consensus 225 ---~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (468)
++++.++++++. .++++|+||||||.+|+.+|.++|++|+++|+++|..........................
T Consensus 87 ~~~~~dl~~~l~~l~----~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (285)
T 1c4x_A 87 GMRVEQILGLMNHFG----IEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELARLLAFYADPRLTP 162 (285)
T ss_dssp HHHHHHHHHHHHHHT----CSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHHHHHHTGGGSCCHHH
T ss_pred hhHHHHHHHHHHHhC----CCccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCCCCCccchhHHHHHHHhccccHHH
Confidence 999999999854 3589999999999999999999999999999999865321110000000000000000000
Q ss_pred HHHHhhhhcCChhhHHHHhhccCCC-hhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHH--HH-H-h--HHHhhh
Q 012190 302 VPYLLSYVMGDPIKMAMVNIENRLP-PRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLL--KS-A-S--AYANSR 374 (468)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~-~-~--~~~~~~ 374 (468)
....+.....++ .... ...........+ ............+ .. . . ......
T Consensus 163 ~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (285)
T 1c4x_A 163 YRELIHSFVYDP---------ENFPGMEEIVKSRFEVA-------------NDPEVRRIQEVMFESMKAGMESLVIPPAT 220 (285)
T ss_dssp HHHHHHTTSSCS---------TTCTTHHHHHHHHHHHH-------------HCHHHHHHHHHHHHHHSSCCGGGCCCHHH
T ss_pred HHHHHHHhhcCc---------ccccCcHHHHHHHHHhc-------------cCHHHHHHHHHHhccccccccccccchhh
Confidence 001111110000 0000 000000000000 0000000000000 00 0 0 001245
Q ss_pred cccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 375 LHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 375 l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
+.++++|+|+|+|++|.++|++ ..+.+.+.++++++++++++||++++|+|+++++.|. +|+.
T Consensus 221 l~~i~~P~lii~G~~D~~~p~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~ 283 (285)
T 1c4x_A 221 LGRLPHDVLVFHGRQDRIVPLD-TSLYLTKHLKHAELVVLDRCGHWAQLERWDAMGPMLM--EHFR 283 (285)
T ss_dssp HTTCCSCEEEEEETTCSSSCTH-HHHHHHHHCSSEEEEEESSCCSCHHHHSHHHHHHHHH--HHHH
T ss_pred hccCCCCEEEEEeCCCeeeCHH-HHHHHHHhCCCceEEEeCCCCcchhhcCHHHHHHHHH--HHHh
Confidence 6789999999999999999999 6899999999999999999999999999999999999 5654
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-28 Score=240.25 Aligned_cols=260 Identities=15% Similarity=0.144 Sum_probs=160.3
Q ss_pred eeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC-------ChHHHHHHHHHHHHHHhhcC
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHASS 239 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-------s~~~~~~dl~~~i~~~~~~~ 239 (468)
++|...|.. .+|+|||+||++++...|..+++.|++.|+|+++|+||||.| +++++++|+.+++++++
T Consensus 19 l~y~~~G~g--~~~pvvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~a~dl~~ll~~l~--- 93 (316)
T 3afi_E 19 MAYRETGAQ--DAPVVLFLHGNPTSSHIWRNILPLVSPVAHCIAPDLIGFGQSGKPDIAYRFFDHVRYLDAFIEQRG--- 93 (316)
T ss_dssp EEEEEESCT--TSCEEEEECCTTCCGGGGTTTHHHHTTTSEEEEECCTTSTTSCCCSSCCCHHHHHHHHHHHHHHTT---
T ss_pred EEEEEeCCC--CCCeEEEECCCCCchHHHHHHHHHHhhCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC---
Confidence 466666651 124899999999999999999999988899999999999998 47899999999999854
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCC-CCcC-----cch---HHHhhCchhHHhhHHHHhhhhc
Q 012190 240 PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGR-SQLQ-----PLF---PILKAMPDELHCAVPYLLSYVM 310 (468)
Q Consensus 240 ~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~-~~~~-----~~~---~~~~~~~~~~~~~~~~~~~~~~ 310 (468)
.++++|+||||||.+|+.+|.++|++|+++|++++...... .... ... .........+. .+.......
T Consensus 94 -~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 170 (316)
T 3afi_E 94 -VTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFHHTEVAEEQDHAEAARAVFRKFR--TPGEGEAMI 170 (316)
T ss_dssp -CCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEECCCBSSGGGTTCCCCGGGHHHHHHHHHHHHHHT--STTHHHHHH
T ss_pred -CCCEEEEEeCccHHHHHHHHHHCHHhhhheeeeccCCCcchhhhccchhhccccccchhHHHHHHHhc--CCchhhHHH
Confidence 45899999999999999999999999999999987432100 0000 000 00000000000 000000000
Q ss_pred C--ChhhHHH-Hh-hccCCChhHHhhhhhhhcchh--cchhhhhhccCCcc-hhHHHHHHHHHHhHHHhhhcccCCceEE
Q 012190 311 G--DPIKMAM-VN-IENRLPPRIKLEQLSNNLPAL--LPRLSVMSDIIPKD-TLLWKLKLLKSASAYANSRLHAVKAEVL 383 (468)
Q Consensus 311 ~--~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~l~~i~~PvL 383 (468)
. ..+.... .. .......+. .+.+...+... .............. ......... ......+.++++|+|
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~i~~P~L 245 (316)
T 3afi_E 171 LEANAFVERVLPGGIVRKLGDEE-MAPYRTPFPTPESRRPVLAFPRELPIAGEPADVYEAL----QSAHAALAASSYPKL 245 (316)
T ss_dssp TTSCHHHHTTTGGGCSSCCCHHH-HHHHHTTCCSTGGGHHHHHTGGGSCBTTBSHHHHHHH----HHHHHHHHHCCSCEE
T ss_pred hccchHHHHhcccccCCCCCHHH-HHHHHhhcCCccchhHHHHHHHhccccccchhhhhHH----HHHHHhhhccCCCeE
Confidence 0 0000000 00 000111110 11111111000 00000000001000 000000001 111345578999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCccccc
Q 012190 384 VLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRS 442 (468)
Q Consensus 384 lI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r~ 442 (468)
+|+|++|.++|++ ..+.+.+.+|++++++++++||++++|+|+++++.|. +|+++.
T Consensus 246 vi~G~~D~~~~~~-~~~~~~~~~p~~~~~~i~~~GH~~~~e~p~~~~~~i~--~fl~~~ 301 (316)
T 3afi_E 246 LFTGEPGALVSPE-FAERFAASLTRCALIRLGAGLHYLQEDHADAIGRSVA--GWIAGI 301 (316)
T ss_dssp EEEEEECSSSCHH-HHHHHHHHSSSEEEEEEEEECSCHHHHHHHHHHHHHH--HHHHHH
T ss_pred EEecCCCCccCHH-HHHHHHHhCCCCeEEEcCCCCCCchhhCHHHHHHHHH--HHHhhc
Confidence 9999999999998 7999999999999999999999999999999999999 677643
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.96 E-value=5.6e-28 Score=229.16 Aligned_cols=250 Identities=10% Similarity=0.098 Sum_probs=157.3
Q ss_pred cCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhc-CCeEEEEecCCCCCCC-------ChHHHHHHH
Q 012190 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVYDRT-------PFEGLVKFV 228 (468)
Q Consensus 157 ~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~-~~~~V~~~D~~G~G~S-------s~~~~~~dl 228 (468)
...+|.. ++|...|+ +|+|||+||++++...|..+++.|. .+|+|+++|+||||.| +++++++|+
T Consensus 4 ~~~~g~~---l~y~~~g~----g~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl 76 (274)
T 1a8q_A 4 TTRDGVE---IFYKDWGQ----GRPVVFIHGWPLNGDAWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWDGYDFDTFADDL 76 (274)
T ss_dssp ECTTSCE---EEEEEECS----SSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHH
T ss_pred EccCCCE---EEEEecCC----CceEEEECCCcchHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCcHHHHHHHH
Confidence 3455554 45666664 6789999999999999999999994 5799999999999988 478999999
Q ss_pred HHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhC-CCCceEEEEeCCCCCCCCCC--cC-cc-hHHHhhCchhHHhhHH
Q 012190 229 EETVRREHASSPEKPIYLVGDSFGGCLALAVAARN-PTIDLILILSNPATSFGRSQ--LQ-PL-FPILKAMPDELHCAVP 303 (468)
Q Consensus 229 ~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~-P~~v~~lVli~p~~~~~~~~--~~-~~-~~~~~~~~~~~~~~~~ 303 (468)
.++++++ ..++++|+||||||.+++.+|+++ |++|+++|++++........ .. .. ......+.........
T Consensus 77 ~~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (274)
T 1a8q_A 77 NDLLTDL----DLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGVLTERS 152 (274)
T ss_dssp HHHHHHT----TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHc----CCCceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCCCccccccccCcccchHHHHHHHHHHhhccHH
Confidence 9999984 345899999999999999988876 99999999999754221110 00 00 0011000000000000
Q ss_pred HHhhhhcCChhhHHHHhh---ccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHH-hHHHhhhcccCC
Q 012190 304 YLLSYVMGDPIKMAMVNI---ENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSA-SAYANSRLHAVK 379 (468)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~l~~i~ 379 (468)
..+..+. ..+... ....... ....+.... .. .........+... .......+.+++
T Consensus 153 ~~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~-------------~~-~~~~~~~~~~~~~~~~~~~~~l~~i~ 212 (274)
T 1a8q_A 153 QFWKDTA-----EGFFSANRPGNKVTQG-NKDAFWYMA-------------MA-QTIEGGVRCVDAFGYTDFTEDLKKFD 212 (274)
T ss_dssp HHHHHHH-----HHHTTTTSTTCCCCHH-HHHHHHHHH-------------TT-SCHHHHHHHHHHHHHCCCHHHHTTCC
T ss_pred HHHHHhc-----ccccccccccccccHH-HHHHHHHHh-------------hh-cChHHHHHHHhhhhcCcHHHHhhcCC
Confidence 0000000 000000 0001100 011110000 00 0011111111111 111234568899
Q ss_pred ceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCcccccc--CcHHHHHHHHhcCcc
Q 012190 380 AEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLE--EGISLLTIIKGTCKY 439 (468)
Q Consensus 380 ~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e--~p~~~~~~I~~~~F~ 439 (468)
+|+|+|+|++|.++|++...+.+.+.++++++++++++||++++| +|+++++.|. +|+
T Consensus 213 ~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~~~p~~~~~~i~--~fl 272 (274)
T 1a8q_A 213 IPTLVVHGDDDQVVPIDATGRKSAQIIPNAELKVYEGSSHGIAMVPGDKEKFNRDLL--EFL 272 (274)
T ss_dssp SCEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTTTTSTTHHHHHHHHHH--HHH
T ss_pred CCEEEEecCcCCCCCcHHHHHHHHhhCCCceEEEECCCCCceecccCCHHHHHHHHH--HHh
Confidence 999999999999999872245677788999999999999999999 9999999999 454
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.6e-28 Score=232.00 Aligned_cols=256 Identities=13% Similarity=0.065 Sum_probs=158.0
Q ss_pred cCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhc-CCeEEEEecCCCCCCC-------ChHHHHHHH
Q 012190 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVYDRT-------PFEGLVKFV 228 (468)
Q Consensus 157 ~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~-~~~~V~~~D~~G~G~S-------s~~~~~~dl 228 (468)
...+|.. ++|...|. +++|+|||+||++++...|..+++.|. .+|+|+++|+||||.| +++++++|+
T Consensus 5 ~~~~g~~---l~y~~~g~--~~~~~vvllHG~~~~~~~w~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~d~ 79 (276)
T 1zoi_A 5 TTKDGVQ---IFYKDWGP--RDAPVIHFHHGWPLSADDWDAQLLFFLAHGYRVVAHDRRGHGRSSQVWDGHDMDHYADDV 79 (276)
T ss_dssp ECTTSCE---EEEEEESC--TTSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHH
T ss_pred ECCCCcE---EEEEecCC--CCCCeEEEECCCCcchhHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCCCHHHHHHHH
Confidence 3456655 45655563 136789999999999999999999995 5799999999999998 478999999
Q ss_pred HHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhC-CCCceEEEEeCCCCCCCCCC--cC-cc-hHHHhhCchhHHhhHH
Q 012190 229 EETVRREHASSPEKPIYLVGDSFGGCLALAVAARN-PTIDLILILSNPATSFGRSQ--LQ-PL-FPILKAMPDELHCAVP 303 (468)
Q Consensus 229 ~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~-P~~v~~lVli~p~~~~~~~~--~~-~~-~~~~~~~~~~~~~~~~ 303 (468)
.++++++. .++++|+||||||.+|+.+|+++ |++|+++|++++........ .. .. ......+.........
T Consensus 80 ~~~l~~l~----~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (276)
T 1zoi_A 80 AAVVAHLG----IQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGNPGGLPKSVFDGFQAQVASNRA 155 (276)
T ss_dssp HHHHHHHT----CTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHCHH
T ss_pred HHHHHHhC----CCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCCCccccccccccccccHHHHHHHHHHHHHhHH
Confidence 99999864 34899999999999999988887 99999999999754221110 00 00 0001000000000000
Q ss_pred HHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHH-hHHHhhhcccCCceE
Q 012190 304 YLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSA-SAYANSRLHAVKAEV 382 (468)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~l~~i~~Pv 382 (468)
..+..+....+. ............ ....+.... ...........+... .......+.++++|+
T Consensus 156 ~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 219 (276)
T 1zoi_A 156 QFYRDVPAGPFY-GYNRPGVEASEG-IIGNWWRQG--------------MIGSAKAHYDGIVAFSQTDFTEDLKGIQQPV 219 (276)
T ss_dssp HHHHHHHHTTTT-TTTSTTCCCCHH-HHHHHHHHH--------------HHSCHHHHHHHHHHHHSCCCHHHHHHCCSCE
T ss_pred HHHHHhhhcccc-ccccccccccHH-HHHHHHhhh--------------hhhhHHHHHHHHHHhcccchhhhccccCCCE
Confidence 000000000000 000000000000 001100000 000000001111111 011234567899999
Q ss_pred EEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcc
Q 012190 383 LVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKY 439 (468)
Q Consensus 383 LlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~ 439 (468)
|+|+|++|.++|++...+.+.+.++++++++++++||++++|+|+++++.|. +|+
T Consensus 220 l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl 274 (276)
T 1zoi_A 220 LVMHGDDDQIVPYENSGVLSAKLLPNGALKTYKGYPHGMPTTHADVINADLL--AFI 274 (276)
T ss_dssp EEEEETTCSSSCSTTTHHHHHHHSTTEEEEEETTCCTTHHHHTHHHHHHHHH--HHH
T ss_pred EEEEcCCCcccChHHHHHHHHhhCCCceEEEcCCCCCchhhhCHHHHHHHHH--HHh
Confidence 9999999999998722466778889999999999999999999999999999 454
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.1e-29 Score=234.77 Aligned_cols=246 Identities=18% Similarity=0.213 Sum_probs=158.0
Q ss_pred eeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC--------ChHHHHHHHHHHHHHHhhc
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHAS 238 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S--------s~~~~~~dl~~~i~~~~~~ 238 (468)
++|...|+ +++|||+||++++...|..+++.|++.|+|+++|+||||.| +++++++|+.++++++.
T Consensus 8 ~~y~~~G~----g~~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~dl~~~l~~l~-- 81 (269)
T 2xmz_A 8 FYEANVET----NQVLVFLHGFLSDSRTYHNHIEKFTDNYHVITIDLPGHGEDQSSMDETWNFDYITTLLDRILDKYK-- 81 (269)
T ss_dssp EECCSSCC----SEEEEEECCTTCCGGGGTTTHHHHHTTSEEEEECCTTSTTCCCCTTSCCCHHHHHHHHHHHHGGGT--
T ss_pred EEEEEcCC----CCeEEEEcCCCCcHHHHHHHHHHHhhcCeEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHcC--
Confidence 56777776 56899999999999999999999988899999999999987 46788999999998843
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHH----hhHHHHhhhhcCChh
Q 012190 239 SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELH----CAVPYLLSYVMGDPI 314 (468)
Q Consensus 239 ~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 314 (468)
.++++|+||||||.+|+.+|.++|++|+++|++++......... ....... ...... ......+......+.
T Consensus 82 --~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (269)
T 2xmz_A 82 --DKSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEAN-QLERRLV-DDARAKVLDIAGIELFVNDWEKLPL 157 (269)
T ss_dssp --TSEEEEEEETHHHHHHHHHHHHCSSCCSEEEEESCCSCCSSHHH-HHHHHHH-HHHHHHHHHHHCHHHHHHHHTTSGG
T ss_pred --CCcEEEEEECchHHHHHHHHHhCchheeeeEEEcCCcccCCchh-HHHHhhh-hhHHHHhhccccHHHHHHHHHhCcc
Confidence 45899999999999999999999999999999998653321100 0000000 000000 000000000000000
Q ss_pred hHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHH-HhHHHhhhcccCCceEEEEEeCCCCCC
Q 012190 315 KMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKS-ASAYANSRLHAVKAEVLVLASGKDNML 393 (468)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~l~~i~~PvLlI~G~~D~~v 393 (468)
+ ......+.. ..+.+.... .. .....+...+..+.. ........+.++++|+|+|+|++|.++
T Consensus 158 ---~-~~~~~~~~~-~~~~~~~~~----------~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~ 221 (269)
T 2xmz_A 158 ---F-QSQLELPVE-IQHQIRQQR----------LS-QSPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKF 221 (269)
T ss_dssp ---G-GGGGGSCHH-HHHHHHHHH----------HT-SCHHHHHHHHHHHSTTTSCCCGGGGGGCCSCEEEEEETTCHHH
T ss_pred ---c-cccccCCHH-HHHHHHHHH----------hc-cCcHHHHHHHHHHHhccCccHHHHHHhcCCCEEEEEeCCCccc
Confidence 0 000000100 001111000 00 001111111111000 011123467889999999999999999
Q ss_pred CcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCccccc
Q 012190 394 PSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRS 442 (468)
Q Consensus 394 ~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r~ 442 (468)
++. ..+ +.+.++++++++++++||++++|+|+++++.|. +|+++.
T Consensus 222 ~~~-~~~-~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~~~ 266 (269)
T 2xmz_A 222 VQI-AKK-MANLIPNSKCKLISATGHTIHVEDSDEFDTMIL--GFLKEE 266 (269)
T ss_dssp HHH-HHH-HHHHSTTEEEEEETTCCSCHHHHSHHHHHHHHH--HHHHHH
T ss_pred CHH-HHH-HHhhCCCcEEEEeCCCCCChhhcCHHHHHHHHH--HHHHHh
Confidence 887 454 888999999999999999999999999999999 676543
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.96 E-value=5.6e-28 Score=229.04 Aligned_cols=255 Identities=12% Similarity=0.060 Sum_probs=157.4
Q ss_pred cCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhc-CCeEEEEecCCCCCCC-------ChHHHHHHH
Q 012190 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVYDRT-------PFEGLVKFV 228 (468)
Q Consensus 157 ~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~-~~~~V~~~D~~G~G~S-------s~~~~~~dl 228 (468)
...+|.. ++|...|+ +|+|||+||++++...|..+++.|. ++|+|+++|+||||.| +++++++|+
T Consensus 4 ~~~~g~~---l~y~~~g~----~~~vvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl 76 (273)
T 1a8s_A 4 TTRDGTQ---IYYKDWGS----GQPIVFSHGWPLNADSWESQMIFLAAQGYRVIAHDRRGHGRSSQPWSGNDMDTYADDL 76 (273)
T ss_dssp ECTTSCE---EEEEEESC----SSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHH
T ss_pred ecCCCcE---EEEEEcCC----CCEEEEECCCCCcHHHHhhHHhhHhhCCcEEEEECCCCCCCCCCCCCCCCHHHHHHHH
Confidence 3455554 45666664 6789999999999999999999994 5699999999999988 478999999
Q ss_pred HHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhC-CCCceEEEEeCCCCCCCCCC--cC-cc-hHHHhhCchhHHhhHH
Q 012190 229 EETVRREHASSPEKPIYLVGDSFGGCLALAVAARN-PTIDLILILSNPATSFGRSQ--LQ-PL-FPILKAMPDELHCAVP 303 (468)
Q Consensus 229 ~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~-P~~v~~lVli~p~~~~~~~~--~~-~~-~~~~~~~~~~~~~~~~ 303 (468)
.++++++ ..++++|+||||||.+|+.+|+++ |++|+++|++++........ .. .. ......+.........
T Consensus 77 ~~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (273)
T 1a8s_A 77 AQLIEHL----DLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQASLADRS 152 (273)
T ss_dssp HHHHHHT----TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHh----CCCCeEEEEeChHHHHHHHHHHhcCchheeEEEEEcccCcccccCccccccCcHHHHHHHHHHhHhhHH
Confidence 9999984 445899999999999999988776 99999999999754221110 00 00 0001000000000000
Q ss_pred HHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHH-hHHHhhhcccCCceE
Q 012190 304 YLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSA-SAYANSRLHAVKAEV 382 (468)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~l~~i~~Pv 382 (468)
..+..+....+. ............ ....+.... . ..........+... .......+.++++|+
T Consensus 153 ~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~---------~-----~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 216 (273)
T 1a8s_A 153 QLYKDLASGPFF-GFNQPGAKSSAG-MVDWFWLQG---------M-----AAGHKNAYDCIKAFSETDFTEDLKKIDVPT 216 (273)
T ss_dssp HHHHHHHHTTSS-STTSTTCCCCHH-HHHHHHHHH---------H-----HSCHHHHHHHHHHHHHCCCHHHHHTCCSCE
T ss_pred HHHHHhhccccc-CcCCcccccCHH-HHHHHHHhc---------c-----ccchhHHHHHHHHHhccChhhhhhcCCCCE
Confidence 000000000000 000000000000 000000000 0 00000001111111 011134567899999
Q ss_pred EEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 383 LVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 383 LlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
|+|+|++|.++|++...+.+.+.++++++++++++||++++|+|+++++.|. +|+.
T Consensus 217 lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~--~fl~ 272 (273)
T 1a8s_A 217 LVVHGDADQVVPIEASGIASAALVKGSTLKIYSGAPHGLTDTHKDQLNADLL--AFIK 272 (273)
T ss_dssp EEEEETTCSSSCSTTTHHHHHHHSTTCEEEEETTCCSCHHHHTHHHHHHHHH--HHHH
T ss_pred EEEECCCCccCChHHHHHHHHHhCCCcEEEEeCCCCCcchhhCHHHHHHHHH--HHHh
Confidence 9999999999998722456777889999999999999999999999999999 4553
|
| >4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.4e-28 Score=233.76 Aligned_cols=219 Identities=17% Similarity=0.186 Sum_probs=153.3
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC-------ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeC
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S-------s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS 250 (468)
++.|||+||++++...|..+++.| ..+|+|+++|+||||.| +++++++|+.++++.+... .++++|+|||
T Consensus 51 ~~~VlllHG~~~s~~~~~~la~~La~~Gy~Via~Dl~GhG~S~~~~~~~~~~~~~~d~~~~~~~l~~~--~~~v~lvG~S 128 (281)
T 4fbl_A 51 RIGVLVSHGFTGSPQSMRFLAEGFARAGYTVATPRLTGHGTTPAEMAASTASDWTADIVAAMRWLEER--CDVLFMTGLS 128 (281)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECCCTTSSSCHHHHHTCCHHHHHHHHHHHHHHHHHH--CSEEEEEEET
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhC--CCeEEEEEEC
Confidence 456999999999999999999999 56899999999999998 5788999999999987644 3589999999
Q ss_pred hhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHH
Q 012190 251 FGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIK 330 (468)
Q Consensus 251 ~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (468)
|||.+|+.+|.++|++|+++|+++|+....... ......... ....+.... ...
T Consensus 129 ~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~----~~~~~~~~~-----~~~~~~~~~------------~~~----- 182 (281)
T 4fbl_A 129 MGGALTVWAAGQFPERFAGIMPINAALRMESPD----LAALAFNPD-----APAELPGIG------------SDI----- 182 (281)
T ss_dssp HHHHHHHHHHHHSTTTCSEEEEESCCSCCCCHH----HHHHHTCTT-----CCSEEECCC------------CCC-----
T ss_pred cchHHHHHHHHhCchhhhhhhcccchhcccchh----hHHHHHhHh-----hHHhhhcch------------hhh-----
Confidence 999999999999999999999999865432110 000000000 000000000 000
Q ss_pred hhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC--C
Q 012190 331 LEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ--N 408 (468)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~--~ 408 (468)
.......+.. ...+...+. .+..........+.++++|+|+|+|++|.++|++ .++.+.+.++ +
T Consensus 183 ~~~~~~~~~~---------~~~~~~~~~----~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~v~~~-~~~~l~~~l~~~~ 248 (281)
T 4fbl_A 183 KAEGVKELAY---------PVTPVPAIK----HLITIGAVAEMLLPRVKCPALIIQSREDHVVPPH-NGELIYNGIGSTE 248 (281)
T ss_dssp SSTTCCCCCC---------SEEEGGGHH----HHHHHHHHHHHHGGGCCSCEEEEEESSCSSSCTH-HHHHHHHHCCCSS
T ss_pred hhHHHHHhhh---------ccCchHHHH----HHHHhhhhccccccccCCCEEEEEeCCCCCcCHH-HHHHHHHhCCCCC
Confidence 0000000000 000111111 1111222234567899999999999999999999 7999999986 5
Q ss_pred cEEEEeCCCCccccccC-cHHHHHHHHhcCcccc
Q 012190 409 CIVRNFKDNGHTLLLEE-GISLLTIIKGTCKYRR 441 (468)
Q Consensus 409 ~~~~~i~~aGH~~~~e~-p~~~~~~I~~~~F~~r 441 (468)
+++++++++||.+++|. ++++.+.|. +|+++
T Consensus 249 ~~l~~~~~~gH~~~~e~~~e~v~~~i~--~FL~~ 280 (281)
T 4fbl_A 249 KELLWLENSYHVATLDNDKELILERSL--AFIRK 280 (281)
T ss_dssp EEEEEESSCCSCGGGSTTHHHHHHHHH--HHHHT
T ss_pred cEEEEECCCCCcCccccCHHHHHHHHH--HHHHh
Confidence 68999999999998884 888999988 67665
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.96 E-value=8.9e-28 Score=227.89 Aligned_cols=256 Identities=14% Similarity=0.082 Sum_probs=157.5
Q ss_pred cCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhc-CCeEEEEecCCCCCCC-------ChHHHHHHH
Q 012190 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVYDRT-------PFEGLVKFV 228 (468)
Q Consensus 157 ~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~-~~~~V~~~D~~G~G~S-------s~~~~~~dl 228 (468)
...+|.. ++|...|. +++|+|||+||++++...|..+++.|. ++|+|+++|+||||.| +++++++|+
T Consensus 4 ~~~~g~~---l~y~~~g~--~~~~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl 78 (275)
T 1a88_A 4 TTSDGTN---IFYKDWGP--RDGLPVVFHHGWPLSADDWDNQMLFFLSHGYRVIAHDRRGHGRSDQPSTGHDMDTYAADV 78 (275)
T ss_dssp ECTTSCE---EEEEEESC--TTSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHH
T ss_pred EccCCCE---EEEEEcCC--CCCceEEEECCCCCchhhHHHHHHHHHHCCceEEEEcCCcCCCCCCCCCCCCHHHHHHHH
Confidence 4456655 45666663 246799999999999999999999994 5799999999999988 478999999
Q ss_pred HHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhC-CCCceEEEEeCCCCCCCCCC--cC-cc-hHHHhhCchhHHhhHH
Q 012190 229 EETVRREHASSPEKPIYLVGDSFGGCLALAVAARN-PTIDLILILSNPATSFGRSQ--LQ-PL-FPILKAMPDELHCAVP 303 (468)
Q Consensus 229 ~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~-P~~v~~lVli~p~~~~~~~~--~~-~~-~~~~~~~~~~~~~~~~ 303 (468)
.++++++. .++++|+||||||.+++.+|+++ |++|+++|++++........ .. .. ......+.........
T Consensus 79 ~~~l~~l~----~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (275)
T 1a88_A 79 AALTEALD----LRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAANRA 154 (275)
T ss_dssp HHHHHHHT----CCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHHCHH
T ss_pred HHHHHHcC----CCceEEEEeccchHHHHHHHHHhCchheEEEEEecCCCcccccCccCcccCCHHHHHHHHHHHhhhHH
Confidence 99999864 34899999999999999988887 99999999999754221110 00 00 0000000000000000
Q ss_pred HHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHH-hHHHhhhcccCCceE
Q 012190 304 YLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSA-SAYANSRLHAVKAEV 382 (468)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~l~~i~~Pv 382 (468)
..+..+....+. .........+. .....+.... . ..........+... .......+.++++|+
T Consensus 155 ~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~---------~-----~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 218 (275)
T 1a88_A 155 QFYIDVPSGPFY-GFNREGATVSQ-GLIDHWWLQG---------M-----MGAANAHYECIAAFSETDFTDDLKRIDVPV 218 (275)
T ss_dssp HHHHHHHHTTTT-TTTSTTCCCCH-HHHHHHHHHH---------H-----HSCHHHHHHHHHHHHHCCCHHHHHHCCSCE
T ss_pred HHHHhhhccccc-cccCcccccCH-HHHHHHHHHh---------h-----hcchHhHHHHHhhhhhcccccccccCCCCE
Confidence 000000000000 00000000000 0011100000 0 00000001111111 011124567899999
Q ss_pred EEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcc
Q 012190 383 LVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKY 439 (468)
Q Consensus 383 LlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~ 439 (468)
|+|+|++|.++|++...+.+.+.++++++++++++||++++|+|+++++.|. +|+
T Consensus 219 lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~--~fl 273 (275)
T 1a88_A 219 LVAHGTDDQVVPYADAAPKSAELLANATLKSYEGLPHGMLSTHPEVLNPDLL--AFV 273 (275)
T ss_dssp EEEEETTCSSSCSTTTHHHHHHHSTTEEEEEETTCCTTHHHHCHHHHHHHHH--HHH
T ss_pred EEEecCCCccCCcHHHHHHHHhhCCCcEEEEcCCCCccHHHhCHHHHHHHHH--HHh
Confidence 9999999999998722456777889999999999999999999999999999 454
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A | Back alignment and structure |
|---|
Probab=99.96 E-value=8.8e-28 Score=230.11 Aligned_cols=251 Identities=13% Similarity=0.106 Sum_probs=164.2
Q ss_pred cCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC-------ChHHHHHHHH
Q 012190 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------PFEGLVKFVE 229 (468)
Q Consensus 157 ~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-------s~~~~~~dl~ 229 (468)
+..+|.. ++|...|+ +|+|||+||++++...|..+++.|.+.|+|+++|+||||.| +++++++++.
T Consensus 15 ~~~~g~~---l~~~~~g~----~~~vv~lHG~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~ 87 (301)
T 3kda_A 15 REVDGVK---LHYVKGGQ----GPLVMLVHGFGQTWYEWHQLMPELAKRFTVIAPDLPGLGQSEPPKTGYSGEQVAVYLH 87 (301)
T ss_dssp EEETTEE---EEEEEEES----SSEEEEECCTTCCGGGGTTTHHHHTTTSEEEEECCTTSTTCCCCSSCSSHHHHHHHHH
T ss_pred EeeCCeE---EEEEEcCC----CCEEEEECCCCcchhHHHHHHHHHHhcCeEEEEcCCCCCCCCCCCCCccHHHHHHHHH
Confidence 3445555 45666664 78999999999999999999999977799999999999998 5889999999
Q ss_pred HHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcC----------cchHHHhhC-chhH
Q 012190 230 ETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQ----------PLFPILKAM-PDEL 298 (468)
Q Consensus 230 ~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~----------~~~~~~~~~-~~~~ 298 (468)
++++++... ++++|+||||||.+|+.+|.++|++|+++|++++.......... .+....... +...
T Consensus 88 ~~l~~l~~~---~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (301)
T 3kda_A 88 KLARQFSPD---RPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRFPAFTAQGESLVWHFSFFAADDRLA 164 (301)
T ss_dssp HHHHHHCSS---SCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSCCSSGGGGGSBSEETTEECSSTHHHHHHCSTTHH
T ss_pred HHHHHcCCC---ccEEEEEeCccHHHHHHHHHhChhhccEEEEEccCCCCCCccchhhhcchhhhhhhhHHHhhcCcchH
Confidence 999986432 24999999999999999999999999999999986422111000 000000000 0000
Q ss_pred Hhh--------HHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHH---
Q 012190 299 HCA--------VPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSA--- 367 (468)
Q Consensus 299 ~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--- 367 (468)
... ...++......+ ...+... .+.+...+. ...........+...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~-~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~ 221 (301)
T 3kda_A 165 ETLIAGKERFFLEHFIKSHASNT---------EVFSERL-LDLYARSYA-------------KPHSLNASFEYYRALNES 221 (301)
T ss_dssp HHHHTTCHHHHHHHHHHHTCSSG---------GGSCHHH-HHHHHHHHT-------------SHHHHHHHHHHHHTHHHH
T ss_pred HHHhccchHHHHHHHHHhccCCc---------ccCCHHH-HHHHHHHhc-------------cccccchHHHHHHhhccc
Confidence 000 001111111110 0011100 111111100 001111111111111
Q ss_pred ---hHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccccCC
Q 012190 368 ---SAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSRK 444 (468)
Q Consensus 368 ---~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r~~~ 444 (468)
.......+..+++|+|+|+|++| +++. ..+.+.+.++++++++++++||++++|+|+++++.|. +|+++++.
T Consensus 222 ~~~~~~~~~~l~~i~~P~l~i~G~~D--~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~~l~~~~~ 296 (301)
T 3kda_A 222 VRQNAELAKTRLQMPTMTLAGGGAGG--MGTF-QLEQMKAYAEDVEGHVLPGCGHWLPEECAAPMNRLVI--DFLSRGRH 296 (301)
T ss_dssp HHHHHHHTTSCBCSCEEEEEECSTTS--CTTH-HHHHHHTTBSSEEEEEETTCCSCHHHHTHHHHHHHHH--HHHTTSCC
T ss_pred hhhcccchhhccccCcceEEEecCCC--CChh-HHHHHHhhcccCeEEEcCCCCcCchhhCHHHHHHHHH--HHHhhCch
Confidence 11112334489999999999999 6676 5888999999999999999999999999999999999 78888775
Q ss_pred C
Q 012190 445 L 445 (468)
Q Consensus 445 ~ 445 (468)
.
T Consensus 297 ~ 297 (301)
T 3kda_A 297 H 297 (301)
T ss_dssp C
T ss_pred h
Confidence 4
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-27 Score=229.53 Aligned_cols=241 Identities=20% Similarity=0.225 Sum_probs=155.7
Q ss_pred eeecCCCCCCCCCCeEEEeCCCC---CchhhHHHhH-hhhcCCeEEEEecCCCCCCCC--------hHHHHHHHHHHHHH
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGID---GLGLGLILHH-KPLGKAFEVRCLHIPVYDRTP--------FEGLVKFVEETVRR 234 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~---~s~~~~~~~~-~~L~~~~~V~~~D~~G~G~Ss--------~~~~~~dl~~~i~~ 234 (468)
++|...|+ +.++|||+||++ ++...|..++ +.|.++|+|+++|+||||.|+ ++++++++.+++++
T Consensus 27 l~y~~~g~---g~~~vvllHG~~~~~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~ 103 (289)
T 1u2e_A 27 IHFNDCGQ---GDETVVLLHGSGPGATGWANFSRNIDPLVEAGYRVILLDCPGWGKSDSVVNSGSRSDLNARILKSVVDQ 103 (289)
T ss_dssp EEEEEECC---CSSEEEEECCCSTTCCHHHHTTTTHHHHHHTTCEEEEECCTTSTTSCCCCCSSCHHHHHHHHHHHHHHH
T ss_pred EEEeccCC---CCceEEEECCCCcccchhHHHHHhhhHHHhcCCeEEEEcCCCCCCCCCCCccccCHHHHHHHHHHHHHH
Confidence 46666665 233899999998 7777888888 889878999999999999883 67888999999988
Q ss_pred HhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcc-hHHHhhCchhH----HhhHHHHhhhh
Q 012190 235 EHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPL-FPILKAMPDEL----HCAVPYLLSYV 309 (468)
Q Consensus 235 ~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~ 309 (468)
+ +.++++|+||||||.+|+.+|.++|++|+++|++++...... ..... ......+.... .......+...
T Consensus 104 l----~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (289)
T 1u2e_A 104 L----DIAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMS-LFTPMPTEGIKRLNQLYRQPTIENLKLMMDIF 178 (289)
T ss_dssp T----TCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCC-SSSCSSCHHHHHHHHHHHSCCHHHHHHHHHTT
T ss_pred h----CCCceEEEEECHhHHHHHHHHHHCHHhhhEEEEECCCccccc-cccccchhhHHHHHHHHhcchHHHHHHHHHHh
Confidence 4 445899999999999999999999999999999998653211 11100 00000000000 00000000000
Q ss_pred cCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHH---hHHHhhhcccCCceEEEEE
Q 012190 310 MGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSA---SAYANSRLHAVKAEVLVLA 386 (468)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~l~~i~~PvLlI~ 386 (468)
..++ ...... ........+. .....+......+... .......+.++++|+|+|+
T Consensus 179 ~~~~---------~~~~~~-~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~ 236 (289)
T 1u2e_A 179 VFDT---------SDLTDA-LFEARLNNML------------SRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVW 236 (289)
T ss_dssp SSCT---------TSCCHH-HHHHHHHHHH------------HTHHHHHHHHHHHHHCSCCSCCCGGGGGGCCSCEEEEE
T ss_pred hcCc---------ccCCHH-HHHHHHHHhh------------cChhHHHHHHHHHHhccccccchhhHHhhcCCCeEEEe
Confidence 0000 000000 0000000000 0000011000011000 0001246688999999999
Q ss_pred eCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 387 SGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 387 G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
|++|.++|++ ..+.+.+.++++++++++++||++++|+|+++++.|. +|++
T Consensus 237 G~~D~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~ 287 (289)
T 1u2e_A 237 GRNDRFVPMD-AGLRLLSGIAGSELHIFRDCGHWAQWEHADAFNQLVL--NFLA 287 (289)
T ss_dssp ETTCSSSCTH-HHHHHHHHSTTCEEEEESSCCSCHHHHTHHHHHHHHH--HHHT
T ss_pred eCCCCccCHH-HHHHHHhhCCCcEEEEeCCCCCchhhcCHHHHHHHHH--HHhc
Confidence 9999999999 7999999999999999999999999999999999999 5654
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A | Back alignment and structure |
|---|
Probab=99.96 E-value=4.8e-28 Score=235.10 Aligned_cols=251 Identities=18% Similarity=0.125 Sum_probs=156.8
Q ss_pred eeecCCCCCCCC-CCeEEEeCCCCCchhhHHHhHhhhcC-CeEEEEecCCCCCCC---------ChHHHHHHHHHHHHHH
Q 012190 167 FCPVDCGRPLKG-SPTLLFLPGIDGLGLGLILHHKPLGK-AFEVRCLHIPVYDRT---------PFEGLVKFVEETVRRE 235 (468)
Q Consensus 167 ~~y~~~g~~~~~-~p~lV~lHG~~~s~~~~~~~~~~L~~-~~~V~~~D~~G~G~S---------s~~~~~~dl~~~i~~~ 235 (468)
++|...|.+ + +|+|||+||++++...|..+++.|++ +|+|+++|+||||.| +++++++|+.++++++
T Consensus 36 l~y~~~G~~--~~g~~vvllHG~~~~~~~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~~~~~y~~~~~a~dl~~ll~~l 113 (310)
T 1b6g_A 36 AHYLDEGNS--DAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEEDYTFEFHRNFLLALIERL 113 (310)
T ss_dssp EEEEEEECT--TCSCEEEECCCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCEESCGGGCCHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCC--CCCCEEEEECCCCCchhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCcCCcCHHHHHHHHHHHHHHc
Confidence 567666641 3 68999999999999999999999965 599999999999998 3678999999999996
Q ss_pred hhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHh-hCchhHHhhHHHHhhhhcCChh
Q 012190 236 HASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILK-AMPDELHCAVPYLLSYVMGDPI 314 (468)
Q Consensus 236 ~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 314 (468)
+. ++++|+||||||.+|+.+|.++|++|+++|++++........ ........ ..+.... .+.........-..
T Consensus 114 ~~----~~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 187 (310)
T 1b6g_A 114 DL----RNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTDPVT-QPAFSAFVTQPADGFT-AWKYDLVTPSDLRL 187 (310)
T ss_dssp TC----CSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTT-CTHHHHTTTSSTTTHH-HHHHHHHSCSSCCH
T ss_pred CC----CCEEEEEcChHHHHHHHHHHhChHhheEEEEeccccccCCcc-ccchhhhhhccchHHH-HHHHHhccCchhhh
Confidence 53 489999999999999999999999999999999854210100 00000000 0000000 00000000000000
Q ss_pred hHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHH-------HHhHHHhhhcc-cCCceEEEEE
Q 012190 315 KMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLK-------SASAYANSRLH-AVKAEVLVLA 386 (468)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-------~~~~~~~~~l~-~i~~PvLlI~ 386 (468)
............... .+.+...+... ............+. .........+. ++++|+|+|+
T Consensus 188 ~~~~~~~~~~~~~~~-~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~P~Lvi~ 256 (310)
T 1b6g_A 188 DQFMKRWAPTLTEAE-ASAYAAPFPDT----------SYQAGVRKFPKMVAQRDQAXIDISTEAISFWQNDWNGQTFMAI 256 (310)
T ss_dssp HHHHHHHSTTCCHHH-HHHHHTTCSSG----------GGCHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTCCSEEEEEE
T ss_pred hhHHhhcCCCCCHHH-HHHHhcccCCc----------cchHHHHHHHHHhcccccchhhhhhhHhhhhhccccCceEEEe
Confidence 000000000111110 11111110000 00000000000000 00011234567 8999999999
Q ss_pred eCCCCCCCcHHHHHHHHHhCCCcEEEEe--CCCCccccccCcHHHHHHHHhcCcccc
Q 012190 387 SGKDNMLPSEDEAKRLNNSLQNCIVRNF--KDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 387 G~~D~~v~~~~~~~~l~~~l~~~~~~~i--~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
|++|.+++ . ..+.+.+.+|+++++++ +++||++++ +|+++++.|. +|+.+
T Consensus 257 G~~D~~~~-~-~~~~~~~~ip~~~~~~i~~~~~GH~~~~-~p~~~~~~i~--~Fl~~ 308 (310)
T 1b6g_A 257 GMKDKLLG-P-DVMYPMKALINGCPEPLEIADAGHFVQE-FGEQVAREAL--KHFAE 308 (310)
T ss_dssp ETTCSSSS-H-HHHHHHHHHSTTCCCCEEETTCCSCGGG-GHHHHHHHHH--HHHHH
T ss_pred ccCcchhh-h-HHHHHHHhcccccceeeecCCcccchhh-ChHHHHHHHH--HHHhc
Confidence 99999999 7 68999999999998888 999999999 9999999999 66653
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.2e-28 Score=230.87 Aligned_cols=251 Identities=18% Similarity=0.125 Sum_probs=158.9
Q ss_pred cCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchh-hHHHhHhhhcCCeEEEEecCCCCCCCC----------hHHHH
Q 012190 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGL-GLILHHKPLGKAFEVRCLHIPVYDRTP----------FEGLV 225 (468)
Q Consensus 157 ~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~-~~~~~~~~L~~~~~V~~~D~~G~G~Ss----------~~~~~ 225 (468)
+..+|.. ++|...|.+ ++|+|||+||++++.. .|.++++.|+++|+|+++|+||||.|+ +++++
T Consensus 8 ~~~~g~~---l~~~~~G~~--~~~~vvllHG~~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~a 82 (286)
T 2yys_A 8 VPVGEAE---LYVEDVGPV--EGPALFVLHGGPGGNAYVLREGLQDYLEGFRVVYFDQRGSGRSLELPQDPRLFTVDALV 82 (286)
T ss_dssp EECSSCE---EEEEEESCT--TSCEEEEECCTTTCCSHHHHHHHGGGCTTSEEEEECCTTSTTSCCCCSCGGGCCHHHHH
T ss_pred EeECCEE---EEEEeecCC--CCCEEEEECCCCCcchhHHHHHHHHhcCCCEEEEECCCCCCCCCCCccCcccCcHHHHH
Confidence 3445554 466666642 4789999999999999 899999999889999999999999874 46789
Q ss_pred HHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhC---chh-HHhh
Q 012190 226 KFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAM---PDE-LHCA 301 (468)
Q Consensus 226 ~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~---~~~-~~~~ 301 (468)
+|+.++++++ +.++++|+||||||.+|+.+|.++|+ |+++|++++....... ........ +.. ....
T Consensus 83 ~dl~~ll~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 153 (286)
T 2yys_A 83 EDTLLLAEAL----GVERFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPWVNFPWL----AARLAEAAGLAPLPDPEEN 153 (286)
T ss_dssp HHHHHHHHHT----TCCSEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCCCBHHHH----HHHHHHHTTCCCCSCHHHH
T ss_pred HHHHHHHHHh----CCCcEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCccCcHHH----HHHHHHHhccccchhHHHH
Confidence 9999999984 44589999999999999999999999 9999999986511000 00000000 000 0000
Q ss_pred HHHHhhhhcCChhhHHHHhhccCCChhH-HhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHh-HHHhhhcccCC
Q 012190 302 VPYLLSYVMGDPIKMAMVNIENRLPPRI-KLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSAS-AYANSRLHAVK 379 (468)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~l~~i~ 379 (468)
+...+.. ...... ..... ...... ........ .............. .+.... ......+.+++
T Consensus 154 ~~~~~~~--~~~~~~-~~~~~-~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~i~ 218 (286)
T 2yys_A 154 LKEALKR--EEPKAL-FDRLM-FPTPRGRMAYEWLAE----------GAGILGSDAPGLAF-LRNGLWRLDYTPYLTPER 218 (286)
T ss_dssp HHHHHHH--SCHHHH-HHHHH-CSSHHHHHHHHHHHH----------HTTCCCCSHHHHHH-HHTTGGGCBCGGGCCCCS
T ss_pred HHHHhcc--CChHHH-HHhhh-ccCCccccChHHHHH----------HHhhccccccchhh-cccccccCChhhhhhhcC
Confidence 0000000 000000 00000 000000 00000000 00001001111111 111110 11234578899
Q ss_pred ceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 380 AEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 380 ~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
+|+|+|+|++|.+++++ .+.+.+ ++++++++++++||++++|+|+++++.|. +|+.+
T Consensus 219 ~P~lvi~G~~D~~~~~~--~~~~~~-~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~~ 275 (286)
T 2yys_A 219 RPLYVLVGERDGTSYPY--AEEVAS-RLRAPIRVLPEAGHYLWIDAPEAFEEAFK--EALAA 275 (286)
T ss_dssp SCEEEEEETTCTTTTTT--HHHHHH-HHTCCEEEETTCCSSHHHHCHHHHHHHHH--HHHHT
T ss_pred CCEEEEEeCCCCcCCHh--HHHHHh-CCCCCEEEeCCCCCCcChhhHHHHHHHHH--HHHHh
Confidence 99999999999999887 778888 89999999999999999999999999999 56654
|
| >4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3e-28 Score=228.79 Aligned_cols=242 Identities=14% Similarity=0.111 Sum_probs=161.9
Q ss_pred eecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC-----------ChHHHHHHHHHHHHHHh
Q 012190 168 CPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-----------PFEGLVKFVEETVRREH 236 (468)
Q Consensus 168 ~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-----------s~~~~~~dl~~~i~~~~ 236 (468)
+|...|+ ++|+|||+||++++...|..+++.|.++|+|+++|+||||.| +++++++++.++++.+
T Consensus 12 ~~~~~g~---~~p~vv~~HG~~~~~~~~~~~~~~l~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~- 87 (269)
T 4dnp_A 12 NVRVVGS---GERVLVLAHGFGTDQSAWNRILPFFLRDYRVVLYDLVCAGSVNPDFFDFRRYTTLDPYVDDLLHILDAL- 87 (269)
T ss_dssp TCEEECS---CSSEEEEECCTTCCGGGGTTTGGGGTTTCEEEEECCTTSTTSCGGGCCTTTCSSSHHHHHHHHHHHHHT-
T ss_pred hhhhcCC---CCCEEEEEeCCCCcHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccccCcHHHHHHHHHHHHHhc-
Confidence 4455555 468999999999999999999999988999999999999998 4789999999999984
Q ss_pred hcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCc-Ccch--HHHhhCchhHHhhHHHHhhhhcCCh
Q 012190 237 ASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQL-QPLF--PILKAMPDELHCAVPYLLSYVMGDP 313 (468)
Q Consensus 237 ~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (468)
..++++|+||||||.+|+.+|.++|++|+++|+++|......... .... ................+...+.
T Consensus 88 ---~~~~~~l~GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 161 (269)
T 4dnp_A 88 ---GIDCCAYVGHSVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANYEAWVNGFA--- 161 (269)
T ss_dssp ---TCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHHHHHCHHHHHHHHH---
T ss_pred ---CCCeEEEEccCHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHHhccccchHHHHHHHHhccccHHHHHHHhh---
Confidence 445999999999999999999999999999999998764332211 1100 0011000000000000000000
Q ss_pred hhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCC
Q 012190 314 IKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNML 393 (468)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v 393 (468)
......... ...+.+...+.. ............+. .......+.++++|+|+|+|++|.++
T Consensus 162 -----~~~~~~~~~-~~~~~~~~~~~~-----------~~~~~~~~~~~~~~--~~~~~~~~~~i~~P~l~i~g~~D~~~ 222 (269)
T 4dnp_A 162 -----PLAVGADVP-AAVREFSRTLFN-----------MRPDITLFVSRTVF--NSDMRGVLGLVKVPCHIFQTARDHSV 222 (269)
T ss_dssp -----HHHHCSSCH-HHHHHHHHHHHH-----------SCHHHHHHHHHHHH--TCCCGGGGGGCCSCEEEEEEESBTTB
T ss_pred -----hhhccCCCh-hHHHHHHHHHHc-----------cCcchhhhHhhhhc--chhhHhhhccccCCEEEEecCCCccc
Confidence 000000000 011111111110 11111111111111 11123567889999999999999999
Q ss_pred CcHHHHHHHHHhCCC-cEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 394 PSEDEAKRLNNSLQN-CIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 394 ~~~~~~~~l~~~l~~-~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
+++ ..+.+.+.+++ +++++++++||++++|+|+++++.|. .|+++
T Consensus 223 ~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~--~fl~~ 268 (269)
T 4dnp_A 223 PAS-VATYLKNHLGGKNTVHWLNIEGHLPHLSAPTLLAQELR--RALSH 268 (269)
T ss_dssp CHH-HHHHHHHHSSSCEEEEEEEEESSCHHHHCHHHHHHHHH--HHHC-
T ss_pred CHH-HHHHHHHhCCCCceEEEeCCCCCCccccCHHHHHHHHH--HHHhh
Confidence 999 79999999998 89999999999999999999999999 55543
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-27 Score=225.02 Aligned_cols=238 Identities=12% Similarity=0.048 Sum_probs=158.8
Q ss_pred eeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC-------ChHHHHHHHHHHHHHHhhcC
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHASS 239 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-------s~~~~~~dl~~~i~~~~~~~ 239 (468)
++|...|+ +++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++++.++++++
T Consensus 11 l~~~~~g~--~~~~~vv~lHG~~~~~~~~~~~~~~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~l---- 84 (264)
T 3ibt_A 11 MTYSESGD--PHAPTLFLLSGWCQDHRLFKNLAPLLARDFHVICPDWRGHDAKQTDSGDFDSQTLAQDLLAFIDAK---- 84 (264)
T ss_dssp CCEEEESC--SSSCEEEEECCTTCCGGGGTTHHHHHTTTSEEEEECCTTCSTTCCCCSCCCHHHHHHHHHHHHHHT----
T ss_pred EEEEEeCC--CCCCeEEEEcCCCCcHhHHHHHHHHHHhcCcEEEEccccCCCCCCCccccCHHHHHHHHHHHHHhc----
Confidence 35555565 3578999999999999999999999988899999999999988 4899999999999984
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhC-CCCceEEEEeCCCCCCCCCCcCcchHHHhhCch--hHHhhHHHHhhhhcCChhhH
Q 012190 240 PEKPIYLVGDSFGGCLALAVAARN-PTIDLILILSNPATSFGRSQLQPLFPILKAMPD--ELHCAVPYLLSYVMGDPIKM 316 (468)
Q Consensus 240 ~~~~i~LvGhS~GG~ia~~~a~~~-P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 316 (468)
..++++|+||||||.+|+.+|.++ |++++++|++++.. .... .....+..... ...............
T Consensus 85 ~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 155 (264)
T 3ibt_A 85 GIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLL-QPHP---GFWQQLAEGQHPTEYVAGRQSFFDEWAE----- 155 (264)
T ss_dssp TCCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCS-SCCH---HHHHHHHHTTCTTTHHHHHHHHHHHHHT-----
T ss_pred CCCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCC-CcCh---hhcchhhcccChhhHHHHHHHHHHHhcc-----
Confidence 445899999999999999999999 99999999999876 1111 11111111110 011111111111100
Q ss_pred HHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHH---HhhhcccCCceEEEEEe--CCCC
Q 012190 317 AMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAY---ANSRLHAVKAEVLVLAS--GKDN 391 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~l~~i~~PvLlI~G--~~D~ 391 (468)
.. ......+.+.+.+.. ............+...... ....+.++++|+|+|+| +.|.
T Consensus 156 ------~~-~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~~~~~ 217 (264)
T 3ibt_A 156 ------TT-DNADVLNHLRNEMPW-----------FHGEMWQRACREIEANYRTWGSPLDRMDSLPQKPEICHIYSQPLS 217 (264)
T ss_dssp ------TC-CCHHHHHHHHHTGGG-----------SCHHHHHHHHHHHHHHHHHHSSHHHHHHTCSSCCEEEEEECCSCC
T ss_pred ------cC-CcHHHHHHHHHhhhh-----------ccchhHHHHHHHhccchhhccchhhcccccCCCeEEEEecCCccc
Confidence 00 111112222211110 1111122211222111111 12567899999999976 4444
Q ss_pred CCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 392 MLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 392 ~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
..++. ..+.+.+.++++++++++++||++++|+|+++++.|. +|++
T Consensus 218 ~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~ 263 (264)
T 3ibt_A 218 QDYRQ-LQLEFAAGHSWFHPRHIPGRTHFPSLENPVAVAQAIR--EFLQ 263 (264)
T ss_dssp HHHHH-HHHHHHHHCTTEEEEECCCSSSCHHHHCHHHHHHHHH--HHTC
T ss_pred hhhHH-HHHHHHHhCCCceEEEcCCCCCcchhhCHHHHHHHHH--HHHh
Confidence 44455 5788899999999999999999999999999999999 4543
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 | Back alignment and structure |
|---|
Probab=99.95 E-value=3.4e-28 Score=228.82 Aligned_cols=241 Identities=16% Similarity=0.192 Sum_probs=150.1
Q ss_pred eecCCCCCCCCCC-eEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCC------hHHHHHHHHHHHHHHhhcCC
Q 012190 168 CPVDCGRPLKGSP-TLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP------FEGLVKFVEETVRREHASSP 240 (468)
Q Consensus 168 ~y~~~g~~~~~~p-~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss------~~~~~~dl~~~i~~~~~~~~ 240 (468)
+|...|+ +| +|||+||++++...|.++++.|+++|+|+++|+||||.|+ ++++++++.+. .+
T Consensus 5 ~~~~~G~----g~~~vvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~l~~~-------l~ 73 (258)
T 1m33_A 5 WWQTKGQ----GNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFGALSLADMAEAVLQQ-------AP 73 (258)
T ss_dssp CEEEECC----CSSEEEEECCTTCCGGGGGGTHHHHHTTSEEEEECCTTSTTCCSCCCCCHHHHHHHHHTT-------SC
T ss_pred EEEEecC----CCCeEEEECCCCCChHHHHHHHHHhhcCcEEEEeeCCCCCCCCCCCCcCHHHHHHHHHHH-------hC
Confidence 5666665 56 8999999999999999999999889999999999999984 45554443322 23
Q ss_pred CCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCC-CcCcch-HHHhhCchhHHhhHHHHhhhhcCChhhHHH
Q 012190 241 EKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRS-QLQPLF-PILKAMPDELHCAVPYLLSYVMGDPIKMAM 318 (468)
Q Consensus 241 ~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (468)
++++|+||||||.+|+.+|.++|++|+++|++++...+... .+.... .....+...+..........+...
T Consensus 74 -~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 146 (258)
T 1m33_A 74 -DKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLAL------ 146 (258)
T ss_dssp -SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHHHT------
T ss_pred -CCeEEEEECHHHHHHHHHHHHhhHhhceEEEECCCCCccccccccCCCHHHHHHHHHHHhccHHHHHHHHHHH------
Confidence 68999999999999999999999999999999986433221 111110 000000000000000000000000
Q ss_pred HhhccCCChhHHhhhhhhhcchhcchhhhhhccCC-cchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHH
Q 012190 319 VNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIP-KDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSED 397 (468)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~ 397 (468)
............+.+...+. ....+ ...+......+.. ......+.++++|+|+|+|++|.+++++
T Consensus 147 -~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~--~~~~~~l~~i~~P~l~i~G~~D~~~~~~- 213 (258)
T 1m33_A 147 -QTMGTETARQDARALKKTVL---------ALPMPEVDVLNGGLEILKT--VDLRQPLQNVSMPFLRLYGYLDGLVPRK- 213 (258)
T ss_dssp -TSTTSTTHHHHHHHHHHHHH---------TSCCCCHHHHHHHHHHHHH--CCCTTGGGGCCSCEEEEEETTCSSSCGG-
T ss_pred -HhcCCccchhhHHHHHHHHH---------hccCCcHHHHHHHHHHHHh--CCHHHHHhhCCCCEEEEeecCCCCCCHH-
Confidence 00000000000111110000 00000 0111111111111 1123456789999999999999999998
Q ss_pred HHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 398 EAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 398 ~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
..+.+.+.++++++++++++||++++|+|+++++.|. +|+.+
T Consensus 214 ~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~~ 255 (258)
T 1m33_A 214 VVPMLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLV--ALKQR 255 (258)
T ss_dssp GCC-CTTTCTTCEEEEETTCCSCHHHHSHHHHHHHHH--HHHTT
T ss_pred HHHHHHHhCccceEEEeCCCCCCccccCHHHHHHHHH--HHHHh
Confidence 6888888899999999999999999999999999999 56654
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=5.6e-28 Score=229.95 Aligned_cols=242 Identities=14% Similarity=0.112 Sum_probs=155.0
Q ss_pred eeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhc-CCeEEEEecCCCCCCC-------ChHHHHHHHHHHHHHHhhc
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHAS 238 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~-~~~~V~~~D~~G~G~S-------s~~~~~~dl~~~i~~~~~~ 238 (468)
++|...|+ +++|||+||++++...|.++++.|. ++|+|+++|+||||.| +++++++|+.++++++.
T Consensus 15 l~y~~~g~----~~pvvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~~l~~l~-- 88 (279)
T 1hkh_A 15 LYYEDQGS----GQPVVLIHGYPLDGHSWERQTRELLAQGYRVITYDRRGFGGSSKVNTGYDYDTFAADLHTVLETLD-- 88 (279)
T ss_dssp EEEEEESS----SEEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHHT--
T ss_pred EEEEecCC----CCcEEEEcCCCchhhHHhhhHHHHHhCCcEEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcC--
Confidence 45665564 5679999999999999999999994 5799999999999998 47899999999999854
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHhCCC-CceEEEEeCCCCCCCCCCcCc---c-hHHHhhCchhHH----hhHHHHhhhh
Q 012190 239 SPEKPIYLVGDSFGGCLALAVAARNPT-IDLILILSNPATSFGRSQLQP---L-FPILKAMPDELH----CAVPYLLSYV 309 (468)
Q Consensus 239 ~~~~~i~LvGhS~GG~ia~~~a~~~P~-~v~~lVli~p~~~~~~~~~~~---~-~~~~~~~~~~~~----~~~~~~~~~~ 309 (468)
.++++|+||||||.+++.+|+++|+ +|+++|++++........... . ......+..... .........+
T Consensus 89 --~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (279)
T 1hkh_A 89 --LRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDFYKNF 166 (279)
T ss_dssp --CCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred --CCceEEEEeChhHHHHHHHHHHcCccceeeEEEEccCCcccccCcCCcCCCcHHHHHHHHHHhhhhhhhhHHHHHhhh
Confidence 4589999999999999999999999 999999999854321111000 0 000000000000 0000000000
Q ss_pred cCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccC---CceEEEEE
Q 012190 310 MGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAV---KAEVLVLA 386 (468)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i---~~PvLlI~ 386 (468)
.... .......+.. ....+.+... . ............+ .......+.++ ++|+|+|+
T Consensus 167 ~~~~-----~~~~~~~~~~-~~~~~~~~~~----------~-~~~~~~~~~~~~~---~~~~~~~l~~i~~~~~P~lii~ 226 (279)
T 1hkh_A 167 YNLD-----ENLGSRISEQ-AVTGSWNVAI----------G-SAPVAAYAVVPAW---IEDFRSDVEAVRAAGKPTLILH 226 (279)
T ss_dssp HTHH-----HHBTTTBCHH-HHHHHHHHHH----------T-SCTTHHHHTHHHH---TCBCHHHHHHHHHHCCCEEEEE
T ss_pred hhcc-----cCCcccccHH-HHHhhhhhhc----------c-CcHHHHHHHHHHH---hhchhhhHHHhccCCCCEEEEE
Confidence 0000 0000001100 0111110000 0 0000000000111 11112344566 99999999
Q ss_pred eCCCCCCCcHHHH-HHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcc
Q 012190 387 SGKDNMLPSEDEA-KRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKY 439 (468)
Q Consensus 387 G~~D~~v~~~~~~-~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~ 439 (468)
|++|.++|++ .. +.+.+.++++++++++++||++++|+|+++++.|. +|+
T Consensus 227 G~~D~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl 277 (279)
T 1hkh_A 227 GTKDNILPID-ATARRFHQAVPEADYVEVEGAPHGLLWTHADEVNAALK--TFL 277 (279)
T ss_dssp ETTCSSSCTT-TTHHHHHHHCTTSEEEEETTCCTTHHHHTHHHHHHHHH--HHH
T ss_pred cCCCccCChH-HHHHHHHHhCCCeeEEEeCCCCccchhcCHHHHHHHHH--HHh
Confidence 9999999988 56 88999999999999999999999999999999999 454
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A | Back alignment and structure |
|---|
Probab=99.95 E-value=3.9e-28 Score=231.92 Aligned_cols=264 Identities=16% Similarity=0.117 Sum_probs=164.6
Q ss_pred cCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC-------ChHHHHHHHH
Q 012190 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------PFEGLVKFVE 229 (468)
Q Consensus 157 ~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-------s~~~~~~dl~ 229 (468)
+..+|.. ++|...|. +++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++++.
T Consensus 15 ~~~~g~~---l~~~~~g~--~~~~~vl~lHG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~ 89 (299)
T 3g9x_A 15 VEVLGER---MHYVDVGP--RDGTPVLFLHGNPTSSYLWRNIIPHVAPSHRCIAPDLIGMGKSDKPDLDYFFDDHVRYLD 89 (299)
T ss_dssp EEETTEE---EEEEEESC--SSSCCEEEECCTTCCGGGGTTTHHHHTTTSCEEEECCTTSTTSCCCCCCCCHHHHHHHHH
T ss_pred eeeCCeE---EEEEecCC--CCCCEEEEECCCCccHHHHHHHHHHHccCCEEEeeCCCCCCCCCCCCCcccHHHHHHHHH
Confidence 3445544 45556665 2578999999999999999999999988999999999999988 4889999999
Q ss_pred HHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCC-CcCcch-HHHhhCchhHHhhHHHHhh
Q 012190 230 ETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRS-QLQPLF-PILKAMPDELHCAVPYLLS 307 (468)
Q Consensus 230 ~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~ 307 (468)
++++++ ..++++|+||||||.+|+.+|.++|++++++|++++....... .+.... .....+... .....+.
T Consensus 90 ~~~~~~----~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 162 (299)
T 3g9x_A 90 AFIEAL----GLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFPTWDEWPEFARETFQAFRTA---DVGRELI 162 (299)
T ss_dssp HHHHHT----TCCSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEECCCBSSGGGSCGGGHHHHHHHTSS---SHHHHHH
T ss_pred HHHHHh----CCCcEEEEEeCccHHHHHHHHHhcchheeEEEEecCCcchhhhhhcchHHHHHHHHHcCC---Ccchhhh
Confidence 999984 4558999999999999999999999999999999954433211 111110 111100000 0000000
Q ss_pred hhcCChhhHHHH-hhccCCChhHHhhhhhhhcchhc--chhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEE
Q 012190 308 YVMGDPIKMAMV-NIENRLPPRIKLEQLSNNLPALL--PRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLV 384 (468)
Q Consensus 308 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLl 384 (468)
............ .......... ...+...+.... ................. ............+.++++|+|+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~i~~P~l~ 238 (299)
T 3g9x_A 163 IDQNAFIEGALPKCVVRPLTEVE-MDHYREPFLKPVDREPLWRFPNELPIAGEPA---NIVALVEAYMNWLHQSPVPKLL 238 (299)
T ss_dssp TTSCHHHHTHHHHTCSSCCCHHH-HHHHHGGGSSGGGGHHHHHHHHHSCBTTBSH---HHHHHHHHHHHHHHHCCSCEEE
T ss_pred ccchhhHHHhhhhhhccCCCHHH-HHHHHHHhccccccchhhhhhhhhhhccccc---hhhhhhhhhhhhcccCCCCeEE
Confidence 000000000000 0001111111 111111110000 00000000000000000 0111111223456889999999
Q ss_pred EEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcC
Q 012190 385 LASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTC 437 (468)
Q Consensus 385 I~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~ 437 (468)
|+|++|.+++++ ..+.+.+.++++++++++++||++++|+|+++++.|.++.
T Consensus 239 i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~~~ 290 (299)
T 3g9x_A 239 FWGTPGVLIPPA-EAARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIARWL 290 (299)
T ss_dssp EEEEECSSSCHH-HHHHHHHHSTTEEEEEEEEESSCHHHHCHHHHHHHHHHHS
T ss_pred EecCCCCCCCHH-HHHHHHhhCCCCeEEEeCCCCCcchhcCHHHHHHHHHHHH
Confidence 999999999999 7999999999999999999999999999999999999543
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1e-27 Score=228.77 Aligned_cols=240 Identities=12% Similarity=0.026 Sum_probs=152.4
Q ss_pred eeecCC--CCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC-------ChHHHHHHHHHHHHHHhh
Q 012190 167 FCPVDC--GRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHA 237 (468)
Q Consensus 167 ~~y~~~--g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-------s~~~~~~dl~~~i~~~~~ 237 (468)
++|... |. ++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|+.+++++++
T Consensus 16 l~y~~~~~G~---~~p~vvllHG~~~~~~~w~~~~~~L~~~~rvia~DlrGhG~S~~~~~~~~~~~~a~dl~~ll~~l~- 91 (276)
T 2wj6_A 16 LSYIDNQRDT---DGPAILLLPGWCHDHRVYKYLIQELDADFRVIVPNWRGHGLSPSEVPDFGYQEQVKDALEILDQLG- 91 (276)
T ss_dssp EEEEECCCCC---SSCEEEEECCTTCCGGGGHHHHHHHTTTSCEEEECCTTCSSSCCCCCCCCHHHHHHHHHHHHHHHT-
T ss_pred EEEEEecCCC---CCCeEEEECCCCCcHHHHHHHHHHHhcCCEEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-
Confidence 567666 64 468999999999999999999999988999999999999998 47899999999999965
Q ss_pred cCCCCcEEEEEeChhHHHHHHHHHhC-CCCceEEEEeCCCCCCCCCCcCcchHHHhh--CchhHHhhHHHHhhhhcCChh
Q 012190 238 SSPEKPIYLVGDSFGGCLALAVAARN-PTIDLILILSNPATSFGRSQLQPLFPILKA--MPDELHCAVPYLLSYVMGDPI 314 (468)
Q Consensus 238 ~~~~~~i~LvGhS~GG~ia~~~a~~~-P~~v~~lVli~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 314 (468)
.++++|+||||||.+|+.+|.++ |++|+++|++++....... ........ .+..........+....
T Consensus 92 ---~~~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 161 (276)
T 2wj6_A 92 ---VETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPKP---DFAKSLTLLKDPERWREGTHGLFDVWL---- 161 (276)
T ss_dssp ---CCSEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESCCCSSCCH---HHHHHHHHHHCTTTHHHHHHHHHHHHH----
T ss_pred ---CCceEEEEECHHHHHHHHHHHHhCHHhhceEEEecccccCCCc---hHHHHhhhccCcchHHHHHHHHHHHhh----
Confidence 34899999999999999999999 9999999999875321110 00000000 00000000000000000
Q ss_pred hHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhH---HHhhhcccCCceEEEEEeCCCC
Q 012190 315 KMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASA---YANSRLHAVKAEVLVLASGKDN 391 (468)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~l~~i~~PvLlI~G~~D~ 391 (468)
.........+.+...... ............+..... .....+..+++|+++++|..|.
T Consensus 162 --------~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lv~~~~~~~ 222 (276)
T 2wj6_A 162 --------DGHDEKRVRHHLLEEMAD-----------YGYDCWGRSGRVIEDAYGRNGSPMQMMANLTKTRPIRHIFSQP 222 (276)
T ss_dssp --------TTBCCHHHHHHHHTTTTT-----------CCHHHHHHHHHHHHHHHHHHCCHHHHHHTCSSCCCEEEEECCS
T ss_pred --------cccchHHHHHHHHHHhhh-----------cchhhhhhccchhHHHHhhccchhhHHhhcCCCceEEEEecCc
Confidence 000000001111110000 000000000011110000 0123567889999998874433
Q ss_pred CCC-cHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 392 MLP-SEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 392 ~v~-~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
..+ .....+.+.+.+|++++++++++||++++|+|+++++.|. +|+.+
T Consensus 223 ~~~~~~~~~~~~~~~~p~a~~~~i~~~gH~~~~e~P~~~~~~i~--~Fl~~ 271 (276)
T 2wj6_A 223 TEPEYEKINSDFAEQHPWFSYAKLGGPTHFPAIDVPDRAAVHIR--EFATA 271 (276)
T ss_dssp CSHHHHHHHHHHHHHCTTEEEEECCCSSSCHHHHSHHHHHHHHH--HHHHH
T ss_pred cchhHHHHHHHHHhhCCCeEEEEeCCCCCcccccCHHHHHHHHH--HHHhh
Confidence 322 1113567888899999999999999999999999999999 67654
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-27 Score=223.69 Aligned_cols=246 Identities=16% Similarity=0.211 Sum_probs=163.9
Q ss_pred cCccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC------ChHHHHHH
Q 012190 154 KEIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT------PFEGLVKF 227 (468)
Q Consensus 154 ~~~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S------s~~~~~~d 227 (468)
..+...+|.. ++|...|+ +|+|||+||++++...|..+++.|.++|+|+++|+||||.| ++++++++
T Consensus 5 ~~~~~~~g~~---l~~~~~g~----~~~vv~lHG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~ 77 (262)
T 3r0v_A 5 QTVPSSDGTP---IAFERSGS----GPPVVLVGGALSTRAGGAPLAERLAPHFTVICYDRRGRGDSGDTPPYAVEREIED 77 (262)
T ss_dssp CEEECTTSCE---EEEEEEEC----SSEEEEECCTTCCGGGGHHHHHHHTTTSEEEEECCTTSTTCCCCSSCCHHHHHHH
T ss_pred heEEcCCCcE---EEEEEcCC----CCcEEEECCCCcChHHHHHHHHHHhcCcEEEEEecCCCcCCCCCCCCCHHHHHHH
Confidence 3456677766 45555665 77999999999999999999999999999999999999998 48999999
Q ss_pred HHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhH-----HhhH
Q 012190 228 VEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDEL-----HCAV 302 (468)
Q Consensus 228 l~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 302 (468)
+.++++++ + ++++|+||||||.+++.+|.++| +++++|+++|..................+.... ....
T Consensus 78 ~~~~~~~l----~-~~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (262)
T 3r0v_A 78 LAAIIDAA----G-GAAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYAVDDSRPPVPPDYQTRLDALLAEGRRGDAV 151 (262)
T ss_dssp HHHHHHHT----T-SCEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCCCSTTSCCCCTTHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHhc----C-CCeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcccccccchhhhHHHHHHHHHhhccchhhHH
Confidence 99999984 3 58999999999999999999999 999999999876543322211111111111100 0111
Q ss_pred HHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceE
Q 012190 303 PYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEV 382 (468)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~Pv 382 (468)
..++... ...+. +..+.+..... ...... . ...+.+....... .......+..+++|+
T Consensus 152 ~~~~~~~-------------~~~~~-~~~~~~~~~~~--~~~~~~----~-~~~~~~~~~~~~~-~~~~~~~l~~i~~P~ 209 (262)
T 3r0v_A 152 TYFMTEG-------------VGVPP-DLVAQMQQAPM--WPGMEA----V-AHTLPYDHAVMGD-NTIPTARFASISIPT 209 (262)
T ss_dssp HHHHHHT-------------SCCCH-HHHHHHHTSTT--HHHHHH----T-GGGHHHHHHHHTT-SCCCHHHHTTCCSCE
T ss_pred HHHhhcc-------------cCCCH-HHHHHHHhhhc--ccchHH----H-Hhhhhhhhhhhhc-CCCCHHHcCcCCCCE
Confidence 1111110 11111 11111111000 000000 0 0001100000000 001124567889999
Q ss_pred EEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 383 LVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 383 LlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
|+|+|++|.+++++ ..+.+.+.++++++++++++|| +++|+++++.|. +|++
T Consensus 210 lii~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH---~~~p~~~~~~i~--~fl~ 261 (262)
T 3r0v_A 210 LVMDGGASPAWIRH-TAQELADTIPNARYVTLENQTH---TVAPDAIAPVLV--EFFT 261 (262)
T ss_dssp EEEECTTCCHHHHH-HHHHHHHHSTTEEEEECCCSSS---SCCHHHHHHHHH--HHHC
T ss_pred EEEeecCCCCCCHH-HHHHHHHhCCCCeEEEecCCCc---ccCHHHHHHHHH--HHHh
Confidence 99999999999999 7999999999999999999999 479999999999 5554
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} | Back alignment and structure |
|---|
Probab=99.95 E-value=7e-28 Score=232.43 Aligned_cols=239 Identities=16% Similarity=0.134 Sum_probs=152.8
Q ss_pred eeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcC-CeEEEEecCCCCCCC---------ChHHHHHHHHHHHHHHh
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGK-AFEVRCLHIPVYDRT---------PFEGLVKFVEETVRREH 236 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~-~~~V~~~D~~G~G~S---------s~~~~~~dl~~~i~~~~ 236 (468)
++|...|.+ .++|+|||+||++++...|..+++.|++ +|+|+++|+||||.| +++++++|+.++++++.
T Consensus 35 l~y~~~G~~-~~g~~vvllHG~~~~~~~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~ll~~l~ 113 (297)
T 2xt0_A 35 MHYVDEGPR-DAEHTFLCLHGEPSWSFLYRKMLPVFTAAGGRVVAPDLFGFGRSDKPTDDAVYTFGFHRRSLLAFLDALQ 113 (297)
T ss_dssp EEEEEESCT-TCSCEEEEECCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCEESCGGGCCHHHHHHHHHHHHHHHT
T ss_pred EEEEEccCC-CCCCeEEEECCCCCcceeHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhC
Confidence 566666642 1268999999999999999999999965 599999999999998 36789999999999965
Q ss_pred hcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCc-CcchH-HH---hhCchhHHhhHHHHhhhhcC
Q 012190 237 ASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQL-QPLFP-IL---KAMPDELHCAVPYLLSYVMG 311 (468)
Q Consensus 237 ~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~-~~~~~-~~---~~~~~~~~~~~~~~~~~~~~ 311 (468)
.++++|+||||||.+|+.+|.++|++|+++|++++.... ... ..... .. ...+... ....+...
T Consensus 114 ----~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-- 182 (297)
T 2xt0_A 114 ----LERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAV--GLSPGKGFESWRDFVANSPDLD---VGKLMQRA-- 182 (297)
T ss_dssp ----CCSEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCCCCS--SSCSCHHHHHHHHHHHTCTTCC---HHHHHHHH--
T ss_pred ----CCCEEEEEECchHHHHHHHHHhChHHhcEEEEECCCCCc--ccCCchhHHHHHHHhhcccccc---hhHHHhcc--
Confidence 348999999999999999999999999999999985411 111 00000 00 0000000 00000000
Q ss_pred ChhhHHHHhhccCCChhHHhhhhhhhcchh--cchhhhhhccCC--cchhHHHHHHHHHHhHHHhhhcc-cCCceEEEEE
Q 012190 312 DPIKMAMVNIENRLPPRIKLEQLSNNLPAL--LPRLSVMSDIIP--KDTLLWKLKLLKSASAYANSRLH-AVKAEVLVLA 386 (468)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~l~-~i~~PvLlI~ 386 (468)
. ...... ....+...+... ............ .....+. . .......+. .+++|+|+|+
T Consensus 183 ---------~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~l~~~i~~P~Lvi~ 245 (297)
T 2xt0_A 183 ---------I-PGITDA-EVAAYDAPFPGPEFKAGVRRFPAIVPITPDMEGAE--I----GRQAMSFWSTQWSGPTFMAV 245 (297)
T ss_dssp ---------S-TTCCHH-HHHHHHTTCSSGGGCHHHHHGGGGSCCSTTSTTHH--H----HHHHHHHHHHTCCSCEEEEE
T ss_pred ---------C-ccCCHH-HHHHHhccccCcchhHHHHHHHHhCccccccchhh--H----HHHHHHHhhhccCCCeEEEE
Confidence 0 011110 011111100000 000000000000 0000000 0 011224567 8999999999
Q ss_pred eCCCCCCCcHHHHHHHHHhCCCcEEEE--eCCCCccccccCcHHHHHHHHhcCcc
Q 012190 387 SGKDNMLPSEDEAKRLNNSLQNCIVRN--FKDNGHTLLLEEGISLLTIIKGTCKY 439 (468)
Q Consensus 387 G~~D~~v~~~~~~~~l~~~l~~~~~~~--i~~aGH~~~~e~p~~~~~~I~~~~F~ 439 (468)
|++|.+++ . ..+.+.+.+|++++++ ++++||++++ +|+++++.|. +|+
T Consensus 246 G~~D~~~~-~-~~~~~~~~~p~~~~~~~~~~~~GH~~~~-~p~~~~~~i~--~fl 295 (297)
T 2xt0_A 246 GAQDPVLG-P-EVMGMLRQAIRGCPEPMIVEAGGHFVQE-HGEPIARAAL--AAF 295 (297)
T ss_dssp ETTCSSSS-H-HHHHHHHHHSTTCCCCEEETTCCSSGGG-GCHHHHHHHH--HHT
T ss_pred eCCCcccC-h-HHHHHHHhCCCCeeEEeccCCCCcCccc-CHHHHHHHHH--HHH
Confidence 99999999 6 6889999999887664 7899999999 9999999999 555
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=99.95 E-value=3.2e-27 Score=227.37 Aligned_cols=248 Identities=13% Similarity=0.176 Sum_probs=160.3
Q ss_pred cCCCCCCceeeeecCCCCCCCCCCeEEEeCCCC---CchhhHHHhHhhhcCCeEEEEecCCCCCCC-------ChHHHHH
Q 012190 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGID---GLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------PFEGLVK 226 (468)
Q Consensus 157 ~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~---~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-------s~~~~~~ 226 (468)
+..+|.. ++|...|+ +|+|||+||++ ++...|..+++.|.+.|+|+++|+||||.| +++++++
T Consensus 21 ~~~~g~~---l~y~~~g~----g~~vvllHG~~~~~~~~~~~~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~ 93 (296)
T 1j1i_A 21 VNAGGVE---TRYLEAGK----GQPVILIHGGGAGAESEGNWRNVIPILARHYRVIAMDMLGFGKTAKPDIEYTQDRRIR 93 (296)
T ss_dssp EEETTEE---EEEEEECC----SSEEEEECCCSTTCCHHHHHTTTHHHHTTTSEEEEECCTTSTTSCCCSSCCCHHHHHH
T ss_pred EEECCEE---EEEEecCC----CCeEEEECCCCCCcchHHHHHHHHHHHhhcCEEEEECCCCCCCCCCCCCCCCHHHHHH
Confidence 3345544 46666665 67899999998 778899999999988899999999999987 4788899
Q ss_pred HHHHHHHHHhhcCCC-CcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHH
Q 012190 227 FVEETVRREHASSPE-KPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYL 305 (468)
Q Consensus 227 dl~~~i~~~~~~~~~-~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (468)
++.++++.+ .. ++++|+||||||.+|+.+|.++|++++++|+++|...... ............+.. ......
T Consensus 94 dl~~~l~~l----~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~ 166 (296)
T 1j1i_A 94 HLHDFIKAM----NFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVE-IHEDLRPIINYDFTR--EGMVHL 166 (296)
T ss_dssp HHHHHHHHS----CCSSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC-----------CCSCH--HHHHHH
T ss_pred HHHHHHHhc----CCCCCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCCC-CCchHHHHhcccCCc--hHHHHH
Confidence 999999884 33 5899999999999999999999999999999998653211 111010011000000 001111
Q ss_pred hhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHh--HHHhhhcccCCceEE
Q 012190 306 LSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSAS--AYANSRLHAVKAEVL 383 (468)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~l~~i~~PvL 383 (468)
+..+..++ ...... ........... + .....+........... ......+.++++|+|
T Consensus 167 ~~~~~~~~---------~~~~~~-~~~~~~~~~~~-----~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~L 226 (296)
T 1j1i_A 167 VKALTNDG---------FKIDDA-MINSRYTYATD-----E-----ATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTL 226 (296)
T ss_dssp HHHHSCTT---------CCCCHH-HHHHHHHHHHS-----H-----HHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEE
T ss_pred HHHhccCc---------ccccHH-HHHHHHHHhhC-----c-----chhhHHHHHHHHHHhcccccccHHHhhcCCCCEE
Confidence 11111110 000000 00000000000 0 00000000000000000 001235678999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 384 VLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 384 lI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
+|+|++|.++|++ ..+.+.+.++++++++++++||++++|+|+++++.|. +|+.+
T Consensus 227 ii~G~~D~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~~ 281 (296)
T 1j1i_A 227 VVQGKDDKVVPVE-TAYKFLDLIDDSWGYIIPHCGHWAMIEHPEDFANATL--SFLSL 281 (296)
T ss_dssp EEEETTCSSSCHH-HHHHHHHHCTTEEEEEESSCCSCHHHHSHHHHHHHHH--HHHHH
T ss_pred EEEECCCcccCHH-HHHHHHHHCCCCEEEEECCCCCCchhcCHHHHHHHHH--HHHhc
Confidence 9999999999999 7999999999999999999999999999999999999 56654
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.95 E-value=6.5e-28 Score=227.38 Aligned_cols=243 Identities=14% Similarity=0.094 Sum_probs=159.8
Q ss_pred eeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC---------ChHHHHHHHHHHHHHHhh
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT---------PFEGLVKFVEETVRREHA 237 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S---------s~~~~~~dl~~~i~~~~~ 237 (468)
++|...|+ +|+|||+||++++...|..+++.|.++|+|+++|+||||.| +++++++++.++++++
T Consensus 15 ~~y~~~g~----~~~vv~~HG~~~~~~~~~~~~~~L~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l-- 88 (278)
T 3oos_A 15 FEYFLKGE----GPPLCVTHLYSEYNDNGNTFANPFTDHYSVYLVNLKGCGNSDSAKNDSEYSMTETIKDLEAIREAL-- 88 (278)
T ss_dssp EEEEEECS----SSEEEECCSSEECCTTCCTTTGGGGGTSEEEEECCTTSTTSCCCSSGGGGSHHHHHHHHHHHHHHT--
T ss_pred EEEEecCC----CCeEEEEcCCCcchHHHHHHHHHhhcCceEEEEcCCCCCCCCCCCCcccCcHHHHHHHHHHHHHHh--
Confidence 46666665 78999999999999999999999988999999999999988 3788899999999984
Q ss_pred cCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhH-
Q 012190 238 SSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKM- 316 (468)
Q Consensus 238 ~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 316 (468)
+.++++|+||||||.+++.+|.++|++++++|+++|............. .. ............+..+.......
T Consensus 89 --~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~ 163 (278)
T 3oos_A 89 --YINKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSI--YC-SKNVKFNRIVSIMNALNDDSTVQE 163 (278)
T ss_dssp --TCSCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBGGGGGSTTST--TS-TTSTTHHHHHHHHHHHTCTTSCHH
T ss_pred --CCCeEEEEeecccHHHHHHHHHhCchhhCeEEEecCccccccccccchh--hh-hhchhHHHHHHHHHhhcccccCch
Confidence 4459999999999999999999999999999999997752111100000 00 00000000111111110000000
Q ss_pred ------HHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHH---HHhHHHhhhcccCCceEEEEEe
Q 012190 317 ------AMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLK---SASAYANSRLHAVKAEVLVLAS 387 (468)
Q Consensus 317 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~l~~i~~PvLlI~G 387 (468)
..........++. ...+.. ...........+..+. .........+.++++|+|+|+|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~-~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g 229 (278)
T 3oos_A 164 ERKALSREWALMSFYSEEK-LEEALK-------------LPNSGKTVGNRLNYFRQVEYKDYDVRQKLKFVKIPSFIYCG 229 (278)
T ss_dssp HHHHHHHHHHHHHCSCHHH-HHHHTT-------------SCCCCEECHHHHHHHHHTTGGGCBCHHHHTTCCSCEEEEEE
T ss_pred HHHHHHHHHhhcccCCcHH-HHHHhh-------------ccccchhHHHHHHHhhhcccccccHHHHHhCCCCCEEEEEe
Confidence 0000000011100 000000 0001111111111221 0011123456789999999999
Q ss_pred CCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHh
Q 012190 388 GKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (468)
Q Consensus 388 ~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~ 435 (468)
++|.+++++ ..+.+.+.++++++++++++||++++|+|+++++.|.+
T Consensus 230 ~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~ 276 (278)
T 3oos_A 230 KHDVQCPYI-FSCEIANLIPNATLTKFEESNHNPFVEEIDKFNQFVND 276 (278)
T ss_dssp TTCSSSCHH-HHHHHHHHSTTEEEEEETTCSSCHHHHSHHHHHHHHHH
T ss_pred ccCCCCCHH-HHHHHHhhCCCcEEEEcCCcCCCcccccHHHHHHHHHh
Confidence 999999999 79999999999999999999999999999999999984
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.7e-27 Score=224.83 Aligned_cols=261 Identities=15% Similarity=0.121 Sum_probs=173.0
Q ss_pred cCccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhc-CCeEEEEecCCCCCCC--------ChHHH
Q 012190 154 KEIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVYDRT--------PFEGL 224 (468)
Q Consensus 154 ~~~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~-~~~~V~~~D~~G~G~S--------s~~~~ 224 (468)
..+...+|....+..+.+.+. +.|+|||+||++++...|..+++.|. .+|+|+++|+||||.| +++++
T Consensus 20 ~~~~~~~g~~l~~~~~~~~~~---~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~ 96 (303)
T 3pe6_A 20 PHLVNADGQYLFCRYWAPTGT---PKALIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGERMVVSDFHVF 96 (303)
T ss_dssp CEEECTTSCEEEEEEECCSSC---CSEEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECCTTSTTSCSSTTCCSSTHHH
T ss_pred CeEecCCCeEEEEEEeccCCC---CCeEEEEECCCCchhhHHHHHHHHHHhCCCcEEEeCCCCCCCCCCCCCCCCCHHHH
Confidence 356677777755544444433 47899999999999999999999994 5899999999999988 36888
Q ss_pred HHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHH
Q 012190 225 VKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPY 304 (468)
Q Consensus 225 ~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (468)
++|+.++++.+....+.++++|+||||||.+++.+|.++|++++++|+++|........ ..............
T Consensus 97 ~~d~~~~l~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~-------~~~~~~~~~~~~~~ 169 (303)
T 3pe6_A 97 VRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPES-------ATTFKVLAAKVLNS 169 (303)
T ss_dssp HHHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSSBCHHH-------HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhccCCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECccccCchhc-------cHHHHHHHHHHHHH
Confidence 99999999998877777799999999999999999999999999999999865432110 00000000000110
Q ss_pred HhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEE
Q 012190 305 LLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLV 384 (468)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLl 384 (468)
............ .. ...... ....+... ...........+..... .........+.++++|+|+
T Consensus 170 ~~~~~~~~~~~~---~~-~~~~~~-~~~~~~~~----------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~P~l~ 233 (303)
T 3pe6_A 170 VLPNLSSGPIDS---SV-LSRNKT-EVDIYNSD----------PLICRAGLKVCFGIQLL-NAVSRVERALPKLTVPFLL 233 (303)
T ss_dssp TCCSCCCCCCCG---GG-TCSCHH-HHHHHHTC----------TTSCCSCCCHHHHHHHH-HHHHHHHHHGGGCCSCEEE
T ss_pred hcccccCCccch---hh-hhcchh-HHHHhccC----------ccccccchhhhhHHHHH-HHHHHHHHHhhcCCCCEEE
Confidence 000000000000 00 000000 00111100 00001111112221122 1222334567889999999
Q ss_pred EEeCCCCCCCcHHHHHHHHHhCC--CcEEEEeCCCCccccccCcHHHHHHHHhc-Ccccc
Q 012190 385 LASGKDNMLPSEDEAKRLNNSLQ--NCIVRNFKDNGHTLLLEEGISLLTIIKGT-CKYRR 441 (468)
Q Consensus 385 I~G~~D~~v~~~~~~~~l~~~l~--~~~~~~i~~aGH~~~~e~p~~~~~~I~~~-~F~~r 441 (468)
|+|++|.+++.+ ..+.+.+.++ ++++++++++||+++.++|+.+.+.+... +|+.+
T Consensus 234 i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~~~~l~~ 292 (303)
T 3pe6_A 234 LQGSADRLCDSK-GAYLLMELAKSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQ 292 (303)
T ss_dssp EEETTCSSBCHH-HHHHHHHHCCCSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHH
T ss_pred EeeCCCCCCChH-HHHHHHHhcccCCceEEEeCCCccceeccchHHHHHHHHHHHHHHhc
Confidence 999999999999 7999999998 78999999999999999999888877654 55544
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-27 Score=222.90 Aligned_cols=219 Identities=19% Similarity=0.226 Sum_probs=148.8
Q ss_pred eeecCCCCCCCCCCeEEEeCCCCCc-hhhHHHhHhhhcC-CeEEEEecCCCCCCCC----------hHHHHHHHHHHHHH
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGIDGL-GLGLILHHKPLGK-AFEVRCLHIPVYDRTP----------FEGLVKFVEETVRR 234 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~~s-~~~~~~~~~~L~~-~~~V~~~D~~G~G~Ss----------~~~~~~dl~~~i~~ 234 (468)
++|...|+ +.|+|||+||++++ ...|.++++.|.+ +|+|+++|+||||.|+ +++.++++.++++.
T Consensus 14 l~~~~~g~---~~~~vvllHG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~l~~ 90 (254)
T 2ocg_A 14 LHYQQTGE---GDHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPDRDFPADFFERDAKDAVDLMKA 90 (254)
T ss_dssp EEEEEEEC---CSEEEEEECCTTCCHHHHCHHHHHHSCTTTEEEEEECCTTSTTCCSSCCCCCTTHHHHHHHHHHHHHHH
T ss_pred EEEEEecC---CCCeEEEECCCCCCCccchHHHHHHHhhCCCeEEEECCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHH
Confidence 45655564 34589999999998 6789999999965 5999999999999883 45667777788777
Q ss_pred HhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhH--HhhHHHHhhhhcCC
Q 012190 235 EHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDEL--HCAVPYLLSYVMGD 312 (468)
Q Consensus 235 ~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 312 (468)
+ +.++++|+||||||.+|+.+|.++|++|+++|++++....... ............ .......+......
T Consensus 91 l----~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (254)
T 2ocg_A 91 L----KFKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDE----DSMIYEGIRDVSKWSERTRKPLEALYGY 162 (254)
T ss_dssp T----TCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHH----HHHHHHTTSCGGGSCHHHHHHHHHHHCH
T ss_pred h----CCCCEEEEEECHhHHHHHHHHHHChHHhhheeEeccccccChh----hHHHHHHHHHHHHHHHHhHHHHHHHhcc
Confidence 3 4458999999999999999999999999999999985422110 000000000000 00000000000000
Q ss_pred hhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHH-----hHHHhhhcccCCceEEEEEe
Q 012190 313 PIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSA-----SAYANSRLHAVKAEVLVLAS 387 (468)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~l~~i~~PvLlI~G 387 (468)
.. ....... | ...+... .......+.++++|+|+|+|
T Consensus 163 ---------------~~-~~~~~~~---------------------~-~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G 204 (254)
T 2ocg_A 163 ---------------DY-FARTCEK---------------------W-VDGIRQFKHLPDGNICRHLLPRVQCPALIVHG 204 (254)
T ss_dssp ---------------HH-HHHHHHH---------------------H-HHHHHGGGGSGGGBSSGGGGGGCCSCEEEEEE
T ss_pred ---------------hh-hHHHHHH---------------------H-HHHHHHHHhccCCchhhhhhhcccCCEEEEec
Confidence 00 0000000 0 0000000 00012456789999999999
Q ss_pred CCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHh
Q 012190 388 GKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (468)
Q Consensus 388 ~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~ 435 (468)
++|.++|++ ..+.+.+.++++++++++++||++++|+|+++++.|.+
T Consensus 205 ~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 251 (254)
T 2ocg_A 205 EKDPLVPRF-HADFIHKHVKGSRLHLMPEGKHNLHLRFADEFNKLAED 251 (254)
T ss_dssp TTCSSSCHH-HHHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHHHH
T ss_pred CCCccCCHH-HHHHHHHhCCCCEEEEcCCCCCchhhhCHHHHHHHHHH
Confidence 999999999 79999999999999999999999999999999999993
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=99.95 E-value=8.2e-28 Score=230.53 Aligned_cols=269 Identities=13% Similarity=0.088 Sum_probs=168.7
Q ss_pred cCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhh-hcCCeEEEEecCCCCCCC-------ChHHHHHHH
Q 012190 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKP-LGKAFEVRCLHIPVYDRT-------PFEGLVKFV 228 (468)
Q Consensus 157 ~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~-L~~~~~V~~~D~~G~G~S-------s~~~~~~dl 228 (468)
+..+|.. ++|...|+ +|+|||+||++++...|..+++. +.++|+|+++|+||||.| +++++++++
T Consensus 14 ~~~~g~~---l~~~~~g~----~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~ 86 (309)
T 3u1t_A 14 VEVEGAT---IAYVDEGS----GQPVLFLHGNPTSSYLWRNIIPYVVAAGYRAVAPDLIGMGDSAKPDIEYRLQDHVAYM 86 (309)
T ss_dssp EEETTEE---EEEEEEEC----SSEEEEECCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCCCSSCCCHHHHHHHH
T ss_pred EEECCeE---EEEEEcCC----CCEEEEECCCcchhhhHHHHHHHHHhCCCEEEEEccCCCCCCCCCCcccCHHHHHHHH
Confidence 3445554 46666665 78999999999999999999999 588999999999999988 489999999
Q ss_pred HHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCC--CcCcchHHHhhCchhHHhhHHHHh
Q 012190 229 EETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRS--QLQPLFPILKAMPDELHCAVPYLL 306 (468)
Q Consensus 229 ~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 306 (468)
.++++++. .++++|+||||||.+|+.+|.++|++|+++|+++|....... .+................ +...
T Consensus 87 ~~~~~~~~----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 160 (309)
T 3u1t_A 87 DGFIDALG----LDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEAMGPQLGPLFRDLRT--ADVG 160 (309)
T ss_dssp HHHHHHHT----CCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCTTTCSBSCSGGGHHHHHHHHHHHTS--TTHH
T ss_pred HHHHHHcC----CCceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCCCccccccccccchhhhHHHHHHhc--cchh
Confidence 99999854 458999999999999999999999999999999986643311 111111111000000000 0000
Q ss_pred hhhcCChhhHH---HHh--hccCCChhHHhhhhhhhcchhc--chhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCC
Q 012190 307 SYVMGDPIKMA---MVN--IENRLPPRIKLEQLSNNLPALL--PRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVK 379 (468)
Q Consensus 307 ~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~ 379 (468)
........... ... .....+... ...+...+.... .................. ...........+.+++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~i~ 236 (309)
T 3u1t_A 161 EKMVLDGNFFVETILPEMGVVRSLSEAE-MAAYRAPFPTRQSRLPTLQWPREVPIGGEPAF---AEAEVLKNGEWLMASP 236 (309)
T ss_dssp HHHHTTTCHHHHTHHHHTSCSSCCCHHH-HHHHHTTCCSTGGGHHHHHHHHHSCBTTBSHH---HHHHHHHHHHHHHHCC
T ss_pred hhhccccceehhhhcccccccccCCHHH-HHHHHHhcCCccccchHHHHHHHhccccccch---hhhhhhhhhhhcccCC
Confidence 00000000000 000 001111110 111111110000 000000000000000000 0011112234567889
Q ss_pred ceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccccCCC
Q 012190 380 AEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSRKL 445 (468)
Q Consensus 380 ~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r~~~~ 445 (468)
+|+|+|+|++|.++|++ ..+.+.+.+++++++.++++||++++++|+++.+.|. .|+++....
T Consensus 237 ~P~l~i~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~--~fl~~~~~~ 299 (309)
T 3u1t_A 237 IPKLLFHAEPGALAPKP-VVDYLSENVPNLEVRFVGAGTHFLQEDHPHLIGQGIA--DWLRRNKPH 299 (309)
T ss_dssp SCEEEEEEEECSSSCHH-HHHHHHHHSTTEEEEEEEEESSCHHHHCHHHHHHHHH--HHHHHHCCC
T ss_pred CCEEEEecCCCCCCCHH-HHHHHHhhCCCCEEEEecCCcccchhhCHHHHHHHHH--HHHHhcchh
Confidence 99999999999999999 7899999999999999999999999999999999999 677765544
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} | Back alignment and structure |
|---|
Probab=99.95 E-value=5e-27 Score=220.75 Aligned_cols=249 Identities=16% Similarity=0.159 Sum_probs=162.4
Q ss_pred CCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcC--CeEEEEecCCCCCCC------ChHHHHHHHH
Q 012190 158 KPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGK--AFEVRCLHIPVYDRT------PFEGLVKFVE 229 (468)
Q Consensus 158 ~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~--~~~V~~~D~~G~G~S------s~~~~~~dl~ 229 (468)
+.+|.. ++|...|+ +|+|||+||++++...|..++..|.+ +|+|+++|+||||.| +++++++++.
T Consensus 7 ~~~g~~---l~y~~~g~----~~~vv~lhG~~~~~~~~~~~~~~l~~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~ 79 (272)
T 3fsg_A 7 YLTRSN---ISYFSIGS----GTPIIFLHGLSLDKQSTCLFFEPLSNVGQYQRIYLDLPGMGNSDPISPSTSDNVLETLI 79 (272)
T ss_dssp EECTTC---CEEEEECC----SSEEEEECCTTCCHHHHHHHHTTSTTSTTSEEEEECCTTSTTCCCCSSCSHHHHHHHHH
T ss_pred EecCCe---EEEEEcCC----CCeEEEEeCCCCcHHHHHHHHHHHhccCceEEEEecCCCCCCCCCCCCCCHHHHHHHHH
Confidence 445655 45666665 78999999999999999999999965 999999999999998 5899999999
Q ss_pred HHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcch--HHH-hhCch-hHHhhHHHH
Q 012190 230 ETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLF--PIL-KAMPD-ELHCAVPYL 305 (468)
Q Consensus 230 ~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~--~~~-~~~~~-~~~~~~~~~ 305 (468)
+++++.. +.++++|+||||||.+|+.+|.++|++++++|+++|............. ... ..... ........+
T Consensus 80 ~~l~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (272)
T 3fsg_A 80 EAIEEII---GARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINILEEDINPVENKEYFADF 156 (272)
T ss_dssp HHHHHHH---TTCCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGCCCCCCCCEECSCCCCCTTGGGHHHH
T ss_pred HHHHHHh---CCCcEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCccccccccchhhhhhhhhcccCHHHHHHH
Confidence 9998832 3458999999999999999999999999999999987633221100000 000 00000 000000000
Q ss_pred hhhh-cCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEE
Q 012190 306 LSYV-MGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLV 384 (468)
Q Consensus 306 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLl 384 (468)
.... ...+. ....+......... .........+.............+..+++|+|+
T Consensus 157 ~~~~~~~~~~---------------~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~ 213 (272)
T 3fsg_A 157 LSMNVIINNQ---------------AWHDYQNLIIPGLQ--------KEDKTFIDQLQNNYSFTFEEKLKNINYQFPFKI 213 (272)
T ss_dssp HHHCSEESHH---------------HHHHHHHHTHHHHH--------HCCHHHHHHHTTSCSCTTHHHHTTCCCSSCEEE
T ss_pred HHHhccCCCc---------------hhHHHHHHhhhhhh--------hccHHHHHHHhhhcCCChhhhhhhccCCCCEEE
Confidence 0000 00000 00000000000000 000000000000000001111245789999999
Q ss_pred EEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCccccc
Q 012190 385 LASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRS 442 (468)
Q Consensus 385 I~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r~ 442 (468)
|+|++|.++|++ ..+.+.+.++++++++++++||++++|+|+++.+.|. +|+++.
T Consensus 214 i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~--~fl~~~ 268 (272)
T 3fsg_A 214 MVGRNDQVVGYQ-EQLKLINHNENGEIVLLNRTGHNLMIDQREAVGFHFD--LFLDEL 268 (272)
T ss_dssp EEETTCTTTCSH-HHHHHHTTCTTEEEEEESSCCSSHHHHTHHHHHHHHH--HHHHHH
T ss_pred EEeCCCCcCCHH-HHHHHHHhcCCCeEEEecCCCCCchhcCHHHHHHHHH--HHHHHh
Confidence 999999999999 7999999999999999999999999999999999999 566553
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} | Back alignment and structure |
|---|
Probab=99.95 E-value=3e-27 Score=223.21 Aligned_cols=261 Identities=16% Similarity=0.197 Sum_probs=162.8
Q ss_pred ccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC---------ChHHHH
Q 012190 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT---------PFEGLV 225 (468)
Q Consensus 156 ~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S---------s~~~~~ 225 (468)
++..+|.. ++|...|. +++|+|||+||++++...|..+++.| ..+|+|+++|+||||.| ++++++
T Consensus 8 ~~~~~g~~---l~~~~~g~--~~~~~vv~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 82 (286)
T 3qit_A 8 FLEFGGNQ---ICLCSWGS--PEHPVVLCIHGILEQGLAWQEVALPLAAQGYRVVAPDLFGHGRSSHLEMVTSYSSLTFL 82 (286)
T ss_dssp EEEETTEE---EEEEEESC--TTSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSGGGCSHHHHH
T ss_pred eeecCCce---EEEeecCC--CCCCEEEEECCCCcccchHHHHHHHhhhcCeEEEEECCCCCCCCCCCCCCCCcCHHHHH
Confidence 34445555 45555554 25789999999999999999999999 55699999999999988 368899
Q ss_pred HHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHH
Q 012190 226 KFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYL 305 (468)
Q Consensus 226 ~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (468)
+++.+++++ .+.++++++||||||.+|+.+|.++|++++++|+++|...............+............
T Consensus 83 ~~~~~~~~~----~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 156 (286)
T 3qit_A 83 AQIDRVIQE----LPDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESKKESAVNQLTTCLDYLSSTPQ-- 156 (286)
T ss_dssp HHHHHHHHH----SCSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCC---CCHHHHHHHHHHHHTCCCC--
T ss_pred HHHHHHHHh----cCCCCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCCCccccchhhhHHHHHHHHHHhcccc--
Confidence 999999998 45569999999999999999999999999999999997755433311111111100000000000
Q ss_pred hhhhcCChh--hHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHH-----HhHHHhhhcccC
Q 012190 306 LSYVMGDPI--KMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKS-----ASAYANSRLHAV 378 (468)
Q Consensus 306 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~~~l~~i 378 (468)
........ ............... ...+....... ............... ...... ........+.++
T Consensus 157 -~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i 230 (286)
T 3qit_A 157 -HPIFPDVATAASRLRQAIPSLSEEF-SYILAQRITQP--NQGGVRWSWDAIIRT--RSILGLNNLPGGRSQYLEMLKSI 230 (286)
T ss_dssp -CCCBSSHHHHHHHHHHHSTTSCHHH-HHHHHHHTEEE--ETTEEEECSCGGGGG--HHHHTTTSCTTHHHHHHHHHHHC
T ss_pred -ccccccHHHHHHHhhcCCcccCHHH-HHHHhhccccc--cccceeeeechhhhc--cccccccccccchhHHHHHHhcc
Confidence 00000000 000000001111110 11111110000 000000000000000 000000 122223556789
Q ss_pred CceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHh
Q 012190 379 KAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (468)
Q Consensus 379 ~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~ 435 (468)
++|+|+|+|++|.+++++ ..+.+.+.+++++++++++ ||++++|+|+++++.|.+
T Consensus 231 ~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~g-gH~~~~e~p~~~~~~i~~ 285 (286)
T 3qit_A 231 QVPTTLVYGDSSKLNRPE-DLQQQKMTMTQAKRVFLSG-GHNLHIDAAAALASLILT 285 (286)
T ss_dssp CSCEEEEEETTCCSSCHH-HHHHHHHHSTTSEEEEESS-SSCHHHHTHHHHHHHHHC
T ss_pred CCCeEEEEeCCCcccCHH-HHHHHHHHCCCCeEEEeeC-CchHhhhChHHHHHHhhc
Confidence 999999999999999999 7999999999999999999 999999999999999873
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-26 Score=225.40 Aligned_cols=260 Identities=15% Similarity=0.117 Sum_probs=173.9
Q ss_pred CccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcC-CeEEEEecCCCCCCC--------ChHHHH
Q 012190 155 EIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGK-AFEVRCLHIPVYDRT--------PFEGLV 225 (468)
Q Consensus 155 ~~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~-~~~V~~~D~~G~G~S--------s~~~~~ 225 (468)
.+...||.......+.+.+. +.|+|||+||++++...|..+++.|.+ +|.|+++|+||||.| ++++++
T Consensus 39 ~~~~~dg~~l~~~~~~p~~~---~~p~vv~~HG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 115 (342)
T 3hju_A 39 HLVNADGQYLFCRYWKPTGT---PKALIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGERMVVSDFHVFV 115 (342)
T ss_dssp EEECTTSCEEEEEEECCSSC---CSEEEEEECCTTCCGGGGHHHHHHHHTTTEEEEEECCTTSTTSCSSTTCCSCTHHHH
T ss_pred eEEccCCeEEEEEEeCCCCC---CCcEEEEECCCCcccchHHHHHHHHHhCCCeEEEEcCCCCcCCCCcCCCcCcHHHHH
Confidence 45667777654444444433 478999999999999999999999955 899999999999988 378889
Q ss_pred HHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHH
Q 012190 226 KFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYL 305 (468)
Q Consensus 226 ~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (468)
+|+.++++.+....+..+++|+||||||.+++.+|.++|++++++|+++|................. ......
T Consensus 116 ~d~~~~l~~l~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~-------~~~~~~ 188 (342)
T 3hju_A 116 RDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLAA-------KVLNLV 188 (342)
T ss_dssp HHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCSCCTTTTSHHHHHHH-------HHHHHH
T ss_pred HHHHHHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhCccccceEEEECcccccchhhhhHHHHHHH-------HHHHHh
Confidence 9999999998887777799999999999999999999999999999999976543322211111111 011111
Q ss_pred hhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEE
Q 012190 306 LSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVL 385 (468)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI 385 (468)
............ ....... ....+..... .........+....+ .........+.++++|+|+|
T Consensus 189 ~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~----------~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~Pvlii 252 (342)
T 3hju_A 189 LPNLSLGPIDSS----VLSRNKT-EVDIYNSDPL----------ICRAGLKVCFGIQLL-NAVSRVERALPKLTVPFLLL 252 (342)
T ss_dssp CTTCBCCCCCGG----GSCSCHH-HHHHHHTCTT----------CCCSCCBHHHHHHHH-HHHHHHHHHGGGCCSCEEEE
T ss_pred ccccccCccccc----ccccchH-HHHHHhcCcc----------cccccccHHHHHHHH-HHHHHHHHHHHhCCcCEEEE
Confidence 111100000000 0000000 0111110000 000111111211122 12223346678899999999
Q ss_pred EeCCCCCCCcHHHHHHHHHhCC--CcEEEEeCCCCccccccCcHHHHHHHHhc-Ccccc
Q 012190 386 ASGKDNMLPSEDEAKRLNNSLQ--NCIVRNFKDNGHTLLLEEGISLLTIIKGT-CKYRR 441 (468)
Q Consensus 386 ~G~~D~~v~~~~~~~~l~~~l~--~~~~~~i~~aGH~~~~e~p~~~~~~I~~~-~F~~r 441 (468)
+|++|.+++++ ..+.+.+.++ ++++++++++||+++.++|+.+.+.+... +|+.+
T Consensus 253 ~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~~l~~ 310 (342)
T 3hju_A 253 QGSADRLCDSK-GAYLLMELAKSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQ 310 (342)
T ss_dssp EETTCSSSCHH-HHHHHHHHCCCSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHH
T ss_pred EeCCCcccChH-HHHHHHHHcCCCCceEEEECCCCchhhcCChHHHHHHHHHHHHHHhc
Confidence 99999999999 7999999998 78999999999999999998888776654 45543
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.3e-27 Score=231.12 Aligned_cols=252 Identities=15% Similarity=0.118 Sum_probs=158.1
Q ss_pred cCCCCCCceeeeecCCCCCCCC--CCeEEEeCCCCCchhhHHHhHhhhc--CCeEEEEecCCCCCCCC-----------h
Q 012190 157 IKPDGGPPRWFCPVDCGRPLKG--SPTLLFLPGIDGLGLGLILHHKPLG--KAFEVRCLHIPVYDRTP-----------F 221 (468)
Q Consensus 157 ~~~dg~~~~~~~y~~~g~~~~~--~p~lV~lHG~~~s~~~~~~~~~~L~--~~~~V~~~D~~G~G~Ss-----------~ 221 (468)
+..+|.. ++|...|.+..+ +++|||+||++++...|...+..|. .+|+|+++|+||||.|+ +
T Consensus 33 v~~~g~~---l~y~~~G~~~~~~~g~plvllHG~~~~~~~w~~~~~~l~~~~~~~Via~D~rG~G~S~~~~~~~~~~~~~ 109 (330)
T 3nwo_A 33 VPFGDHE---TWVQVTTPENAQPHALPLIVLHGGPGMAHNYVANIAALADETGRTVIHYDQVGCGNSTHLPDAPADFWTP 109 (330)
T ss_dssp EEETTEE---EEEEEECCSSCCTTCCCEEEECCTTTCCSGGGGGGGGHHHHHTCCEEEECCTTSTTSCCCTTSCGGGCCH
T ss_pred EeecCcE---EEEEEecCccCCCCCCcEEEECCCCCCchhHHHHHHHhccccCcEEEEECCCCCCCCCCCCCCccccccH
Confidence 3344544 456666652122 3479999999999999999999996 58999999999999883 5
Q ss_pred HHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCc-chHHHhhCchhHHh
Q 012190 222 EGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQP-LFPILKAMPDELHC 300 (468)
Q Consensus 222 ~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~-~~~~~~~~~~~~~~ 300 (468)
+++++|+.++++.++ .++++|+||||||.+|+.+|.++|++|.++|+++++..... +.. .......++.....
T Consensus 110 ~~~a~dl~~ll~~lg----~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 183 (330)
T 3nwo_A 110 QLFVDEFHAVCTALG----IERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRL--WSEAAGDLRAQLPAETRA 183 (330)
T ss_dssp HHHHHHHHHHHHHHT----CCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCCSBHHH--HHHHHHHHHHHSCHHHHH
T ss_pred HHHHHHHHHHHHHcC----CCceEEEecCHHHHHHHHHHHhCCccceEEEEecCCcchHH--HHHHHHHHHHhcCHHHHH
Confidence 778999999999865 34899999999999999999999999999999988543210 000 00011111111100
Q ss_pred hHHHHh-hhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHH-------HH------
Q 012190 301 AVPYLL-SYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLL-------KS------ 366 (468)
Q Consensus 301 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~~------ 366 (468)
.+.... ......+... .....+...... . .... ...+......+ ..
T Consensus 184 ~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~---~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (330)
T 3nwo_A 184 ALDRHEAAGTITHPDYL------------QAAAEFYRRHVC---R----VVPT-PQDFADSVAQMEAEPTVYHTMNGPNE 243 (330)
T ss_dssp HHHHHHHHTCTTSHHHH------------HHHHHHHHHHTC---C----SSSC-CHHHHHHHHHHHHSCHHHHHHTCSCS
T ss_pred HHHHHHhccCCCCHHHH------------HHHHHHHHHhhc---c----ccCC-CHHHHHHHHhhccchhhhhcccCchh
Confidence 000000 0000000000 000000000000 0 0000 00000000000 00
Q ss_pred -------HhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcc
Q 012190 367 -------ASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKY 439 (468)
Q Consensus 367 -------~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~ 439 (468)
........+.++++|+|+|+|++|.++| . ..+.+.+.+|++++++++++||++++|+|+++++.|. +|+
T Consensus 244 ~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~p-~-~~~~~~~~ip~~~~~~i~~~gH~~~~e~p~~~~~~i~--~FL 319 (330)
T 3nwo_A 244 FHVVGTLGDWSVIDRLPDVTAPVLVIAGEHDEATP-K-TWQPFVDHIPDVRSHVFPGTSHCTHLEKPEEFRAVVA--QFL 319 (330)
T ss_dssp SSCCSGGGGCBCGGGGGGCCSCEEEEEETTCSSCH-H-HHHHHHHHCSSEEEEEETTCCTTHHHHSHHHHHHHHH--HHH
T ss_pred hhhhccccCCchhhhcccCCCCeEEEeeCCCccCh-H-HHHHHHHhCCCCcEEEeCCCCCchhhcCHHHHHHHHH--HHH
Confidence 0001135678899999999999999876 4 4788999999999999999999999999999999999 676
Q ss_pred cc
Q 012190 440 RR 441 (468)
Q Consensus 440 ~r 441 (468)
++
T Consensus 320 ~~ 321 (330)
T 3nwo_A 320 HQ 321 (330)
T ss_dssp HH
T ss_pred Hh
Confidence 54
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.1e-27 Score=223.77 Aligned_cols=242 Identities=14% Similarity=0.128 Sum_probs=146.0
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC--------ChHHHHHHHHHHHHHHhhcCCCCcEEEEE
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSPEKPIYLVG 248 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S--------s~~~~~~dl~~~i~~~~~~~~~~~i~LvG 248 (468)
++|+|||+||++++...|..+++.| .++|+|+++|+||||.| +++++++|+.++++++. ..++++|+|
T Consensus 9 ~g~~vvllHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~---~~~~~~lvG 85 (264)
T 2wfl_A 9 QQKHFVLVHGGCLGAWIWYKLKPLLESAGHKVTAVDLSAAGINPRRLDEIHTFRDYSEPLMEVMASIP---PDEKVVLLG 85 (264)
T ss_dssp CCCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHHHHHHHHHHHSC---TTCCEEEEE
T ss_pred CCCeEEEECCCccccchHHHHHHHHHhCCCEEEEeecCCCCCCCCCcccccCHHHHHHHHHHHHHHhC---CCCCeEEEE
Confidence 4789999999999999999999999 57899999999999988 47889999999999842 135899999
Q ss_pred eChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcch-HHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCCh
Q 012190 249 DSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLF-PILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPP 327 (468)
Q Consensus 249 hS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (468)
|||||.+++.+|.++|++|+++|++++............. ......... ....... .....+... ........
T Consensus 86 hSmGG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~---~~~~~~~~ 159 (264)
T 2wfl_A 86 HSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPAD--MMLDSQF-STYGNPENP---GMSMILGP 159 (264)
T ss_dssp ETTHHHHHHHHHHHCGGGEEEEEEESSCCCCTTSCTTHHHHHHHHHSCTT--TTTTCEE-EEESCTTSC---EEEEECCH
T ss_pred eChHHHHHHHHHHhChhhhceeEEEeeccCCCCcchhhHHHHhhhcCcch--hhhhhhh-hhccCCCCC---cchhhhhH
Confidence 9999999999999999999999999974321111110000 111100000 0000000 000000000 00000000
Q ss_pred hHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC
Q 012190 328 RIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ 407 (468)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~ 407 (468)
......+............. .......... ..+.... .. ......++|+|+|+|++|.++|++ ..+.+.+.+|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~-~~-~~~~~~~~P~l~i~G~~D~~~~~~-~~~~~~~~~p 232 (264)
T 2wfl_A 160 QFMALKMFQNCSVEDLELAK--MLTRPGSLFF--QDLAKAK-KF-STERYGSVKRAYIFCNEDKSFPVE-FQKWFVESVG 232 (264)
T ss_dssp HHHHHHTSTTSCHHHHHHHH--HHCCCEECCH--HHHTTSC-CC-CTTTGGGSCEEEEEETTCSSSCHH-HHHHHHHHHC
T ss_pred HHHHHHHhcCCCHHHHHHHH--hccCCCcccc--ccccccc-cc-ChHHhCCCCeEEEEeCCcCCCCHH-HHHHHHHhCC
Confidence 00000000000000000000 0000000000 0000000 00 000113689999999999999999 6899999999
Q ss_pred CcEEEEeCCCCccccccCcHHHHHHHHh
Q 012190 408 NCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (468)
Q Consensus 408 ~~~~~~i~~aGH~~~~e~p~~~~~~I~~ 435 (468)
++++++++++||++++|+|+++++.|.+
T Consensus 233 ~~~~~~i~~~gH~~~~e~P~~~~~~l~~ 260 (264)
T 2wfl_A 233 ADKVKEIKEADHMGMLSQPREVCKCLLD 260 (264)
T ss_dssp CSEEEEETTCCSCHHHHSHHHHHHHHHH
T ss_pred CceEEEeCCCCCchhhcCHHHHHHHHHH
Confidence 9999999999999999999999999993
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.7e-26 Score=219.55 Aligned_cols=239 Identities=15% Similarity=0.130 Sum_probs=156.4
Q ss_pred CCCCeEEEeCCCCCchhhHHHhHhhhc-CCeEEEEecCCCCCCC--------ChHHHHHHHHHHHHHHhhcCCCCcEEEE
Q 012190 177 KGSPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSPEKPIYLV 247 (468)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~~~~~~~L~-~~~~V~~~D~~G~G~S--------s~~~~~~dl~~~i~~~~~~~~~~~i~Lv 247 (468)
.++|+|||+||++++...|..+++.|. ++|+|+++|+||||.| +++++++++.++++.+ ..++++|+
T Consensus 44 ~~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~ 119 (315)
T 4f0j_A 44 ANGRTILLMHGKNFCAGTWERTIDVLADAGYRVIAVDQVGFCKSSKPAHYQYSFQQLAANTHALLERL----GVARASVI 119 (315)
T ss_dssp CCSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCCCHHHHHHHHHHHHHHT----TCSCEEEE
T ss_pred CCCCeEEEEcCCCCcchHHHHHHHHHHHCCCeEEEeecCCCCCCCCCCccccCHHHHHHHHHHHHHHh----CCCceEEE
Confidence 358899999999999999999999994 5799999999999988 4789999999999884 45599999
Q ss_pred EeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCC----CcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhcc
Q 012190 248 GDSFGGCLALAVAARNPTIDLILILSNPATSFGRS----QLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIEN 323 (468)
Q Consensus 248 GhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (468)
||||||.+|+.+|.++|++++++|+++|....... .............................. .
T Consensus 120 G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~ 189 (315)
T 4f0j_A 120 GHSMGGMLATRYALLYPRQVERLVLVNPIGLEDWKALGVPWRSVDDWYRRDLQTSAEGIRQYQQATYYA----------G 189 (315)
T ss_dssp EETHHHHHHHHHHHHCGGGEEEEEEESCSCSSCHHHHTCCCCCHHHHHHHHTTCCHHHHHHHHHHHTST----------T
T ss_pred EecHHHHHHHHHHHhCcHhhheeEEecCcccCCcccccchhhhhHHHHhhcccCChHHHHHHHHHHHhc----------c
Confidence 99999999999999999999999999985422110 000111111100000000000000000000 0
Q ss_pred CCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHH--HhHHHhhhcccCCceEEEEEeCCCCCCC-------
Q 012190 324 RLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKS--ASAYANSRLHAVKAEVLVLASGKDNMLP------- 394 (468)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~l~~i~~PvLlI~G~~D~~v~------- 394 (468)
..... ...+..... ............+....... ........+.++++|+|+|+|++|.++|
T Consensus 190 ~~~~~--~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~lii~G~~D~~~p~~~~~~~ 260 (315)
T 4f0j_A 190 EWRPE--FDRWVQMQA-------GMYRGKGRESVAWNSALTYDMIFTQPVVYELDRLQMPTLLLIGEKDNTAIGKDAAPA 260 (315)
T ss_dssp CCCGG--GHHHHHHHH-------HHTTSTTHHHHHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETTCCCCTTGGGSCH
T ss_pred ccCCc--hHHHHHHHH-------HHhhccCcchhhHHHHHhcCccccchhhhhcccCCCCeEEEEecCCCcCcccccccc
Confidence 00000 011111000 00000111111111111100 0111234678899999999999999999
Q ss_pred ---------cHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 395 ---------SEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 395 ---------~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
.+ ..+.+.+.++++++++++++||+++.++|+++++.|. +|+++
T Consensus 261 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~--~fl~~ 313 (315)
T 4f0j_A 261 ELKARLGNYAQ-LGKDAARRIPQATLVEFPDLGHTPQIQAPERFHQALL--EGLQT 313 (315)
T ss_dssp HHHTTSCCHHH-HHHHHHHHSTTEEEEEETTCCSCHHHHSHHHHHHHHH--HHHCC
T ss_pred ccccccccchh-hhhHHHhhcCCceEEEeCCCCcchhhhCHHHHHHHHH--HHhcc
Confidence 66 6889999999999999999999999999999999999 66665
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.5e-27 Score=223.79 Aligned_cols=238 Identities=15% Similarity=0.092 Sum_probs=157.8
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC-----------ChHHHHHHHHHHHHHHhhcCCCCcEEE
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-----------PFEGLVKFVEETVRREHASSPEKPIYL 246 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-----------s~~~~~~dl~~~i~~~~~~~~~~~i~L 246 (468)
++|+|||+||++++...|..+++.|.++|+|+++|+||||.| +++++++++.++++.+ +.++++|
T Consensus 27 ~~~~vv~lHG~~~~~~~~~~~~~~l~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l 102 (282)
T 3qvm_A 27 GEKTVLLAHGFGCDQNMWRFMLPELEKQFTVIVFDYVGSGQSDLESFSTKRYSSLEGYAKDVEEILVAL----DLVNVSI 102 (282)
T ss_dssp SSCEEEEECCTTCCGGGGTTTHHHHHTTSEEEECCCTTSTTSCGGGCCTTGGGSHHHHHHHHHHHHHHT----TCCSEEE
T ss_pred CCCeEEEECCCCCCcchHHHHHHHHhcCceEEEEecCCCCCCCCCCCCccccccHHHHHHHHHHHHHHc----CCCceEE
Confidence 358999999999999999999999988999999999999988 3577888888888884 4569999
Q ss_pred EEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCC--cCcc--hHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhc
Q 012190 247 VGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQ--LQPL--FPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIE 322 (468)
Q Consensus 247 vGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (468)
+||||||.+|+.+|.++|++++++|+++|........ +... .................+...+ .....
T Consensus 103 vG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~ 174 (282)
T 3qvm_A 103 IGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMDKNYIGWANYL--------APLVM 174 (282)
T ss_dssp EEETHHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHH--------HHHHH
T ss_pred EEecccHHHHHHHHHhCchhhheEEEecCcchhccCchhhhchhccccHHHHHHHHhcchhhHHHHH--------Hhhcc
Confidence 9999999999999999999999999999976443221 0000 0000000000000000000000 00000
Q ss_pred cCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHH
Q 012190 323 NRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRL 402 (468)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l 402 (468)
...........+...+.. .............. .......+.++++|+|+|+|++|.+++++ ..+.+
T Consensus 175 ~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~--~~~~~~~~~~i~~P~l~i~g~~D~~~~~~-~~~~~ 240 (282)
T 3qvm_A 175 GASHSSELIGELSGSFCT-----------TDPIVAKTFAKATF--FSDYRSLLEDISTPALIFQSAKDSLASPE-VGQYM 240 (282)
T ss_dssp CTTSCHHHHHHHHHHHHH-----------SCHHHHHHHHHHHH--SCBCGGGGGGCCSCEEEEEEEECTTCCHH-HHHHH
T ss_pred CCccchhhHHHHHHHHhc-----------CCcHHHHHHHHHHh--cccHHHHHhcCCCCeEEEEeCCCCcCCHH-HHHHH
Confidence 000011111111111100 01111111111110 11123566889999999999999999999 79999
Q ss_pred HHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccccC
Q 012190 403 NNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSR 443 (468)
Q Consensus 403 ~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r~~ 443 (468)
.+.++++++++++++||+++.++|+++.+.|. +|+++..
T Consensus 241 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~--~fl~~~~ 279 (282)
T 3qvm_A 241 AENIPNSQLELIQAEGHCLHMTDAGLITPLLI--HFIQNNQ 279 (282)
T ss_dssp HHHSSSEEEEEEEEESSCHHHHCHHHHHHHHH--HHHHHC-
T ss_pred HHhCCCCcEEEecCCCCcccccCHHHHHHHHH--HHHHhcC
Confidence 99999999999999999999999999999999 6776543
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A | Back alignment and structure |
|---|
Probab=99.95 E-value=3.5e-26 Score=218.78 Aligned_cols=259 Identities=15% Similarity=0.097 Sum_probs=156.4
Q ss_pred CccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC------------ChH
Q 012190 155 EIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT------------PFE 222 (468)
Q Consensus 155 ~~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S------------s~~ 222 (468)
.++..+|.. ++|...|+ +|+|||+||++++...|..+++.|.++|+|+++|+||||.| +++
T Consensus 16 ~~~~~~g~~---l~~~~~g~----~~~vv~lHG~~~~~~~~~~~~~~l~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~ 88 (306)
T 3r40_A 16 EWINTSSGR---IFARVGGD----GPPLLLLHGFPQTHVMWHRVAPKLAERFKVIVADLPGYGWSDMPESDEQHTPYTKR 88 (306)
T ss_dssp EEECCTTCC---EEEEEEEC----SSEEEEECCTTCCGGGGGGTHHHHHTTSEEEEECCTTSTTSCCCCCCTTCGGGSHH
T ss_pred EEEEeCCEE---EEEEEcCC----CCeEEEECCCCCCHHHHHHHHHHhccCCeEEEeCCCCCCCCCCCCCCcccCCCCHH
Confidence 344556666 45666664 78999999999999999999999988999999999999987 377
Q ss_pred HHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhH
Q 012190 223 GLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAV 302 (468)
Q Consensus 223 ~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (468)
++++++.++++++ ..++++|+||||||.+|+.+|.++|++++++|++++............ ..............
T Consensus 89 ~~~~~~~~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 163 (306)
T 3r40_A 89 AMAKQLIEAMEQL----GHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDILPTYEYWQRMNR-AYALKIYHWSFLAQ 163 (306)
T ss_dssp HHHHHHHHHHHHT----TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCHHHHHHHCSH-HHHHHSTHHHHHTS
T ss_pred HHHHHHHHHHHHh----CCCCEEEEEecchHHHHHHHHHhChhhccEEEEecCCCCccchhhhhh-hhhhhhHHHHHhhc
Confidence 8899999999884 455899999999999999999999999999999998542110000000 00000000000000
Q ss_pred -HHHhhhhc-CChhhHH---HHhh-----ccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHH---HhH
Q 012190 303 -PYLLSYVM-GDPIKMA---MVNI-----ENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKS---ASA 369 (468)
Q Consensus 303 -~~~~~~~~-~~~~~~~---~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~ 369 (468)
......+. ..+.... .... ....+... .+.+...+. ...........+.. ...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~ 229 (306)
T 3r40_A 164 PAPLPENLLGGDPDFYVKAKLASWTRAGDLSAFDPRA-VEHYRIAFA-------------DPMRRHVMCEDYRAGAYADF 229 (306)
T ss_dssp CTTHHHHHHTSCHHHHHHHHHHHTSSSSSSTTSCHHH-HHHHHHHHT-------------SHHHHHHHHHHHHHHHTHHH
T ss_pred ccchHHHHHcCCHHHHHHHHhhcccCCCccccCCHHH-HHHHHHHHc-------------cCCCcchhhHHHHhcccccc
Confidence 00000000 0000000 0000 00111110 111111000 00111111111111 000
Q ss_pred ----HHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCccccc
Q 012190 370 ----YANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRS 442 (468)
Q Consensus 370 ----~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r~ 442 (468)
.....+..+++|+|+|+|++|.+++.....+.+.+..++++++++ ++||++++|+|+++++.|. +|+++.
T Consensus 230 ~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~-~~gH~~~~e~p~~~~~~i~--~fl~~~ 303 (306)
T 3r40_A 230 EHDKIDVEAGNKIPVPMLALWGASGIAQSAATPLDVWRKWASDVQGAPI-ESGHFLPEEAPDQTAEALV--RFFSAA 303 (306)
T ss_dssp HHHHHHHHHTCCBCSCEEEEEETTCC------CHHHHHHHBSSEEEEEE-SSCSCHHHHSHHHHHHHHH--HHHHC-
T ss_pred hhhhhhhhhccCCCcceEEEEecCCcccCchhHHHHHHhhcCCCeEEEe-cCCcCchhhChHHHHHHHH--HHHHhc
Confidence 001256899999999999999999943256777788899999999 6899999999999999999 677653
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A | Back alignment and structure |
|---|
Probab=99.95 E-value=8.5e-26 Score=211.61 Aligned_cols=218 Identities=15% Similarity=0.135 Sum_probs=145.8
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC-------ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeC
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S-------s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS 250 (468)
+|+|||+||++++...|..+++.| .++|+|+++|+||||.| +++++++++.++++.+... +.++++|+|||
T Consensus 16 ~~~vvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~GhG~s~~~~~~~~~~~~~~d~~~~~~~l~~~-~~~~~~lvG~S 94 (247)
T 1tqh_A 16 ERAVLLLHGFTGNSADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDVMNGYEFLKNK-GYEKIAVAGLS 94 (247)
T ss_dssp SCEEEEECCTTCCTHHHHHHHHHHHHTTCEEEECCCTTSSSCHHHHTTCCHHHHHHHHHHHHHHHHHH-TCCCEEEEEET
T ss_pred CcEEEEECCCCCChHHHHHHHHHHHHCCCEEEecccCCCCCCHHHhcCCCHHHHHHHHHHHHHHHHHc-CCCeEEEEEeC
Confidence 578999999999999999999999 46899999999999977 4566777766655444322 34589999999
Q ss_pred hhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHH
Q 012190 251 FGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIK 330 (468)
Q Consensus 251 ~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (468)
|||.+|+.+|.++| |+++|+++++..... ...... ........+.. . ...+...
T Consensus 95 mGG~ia~~~a~~~p--v~~lvl~~~~~~~~~-----~~~~~~----~~~~~~~~~~~-~-------------~~~~~~~- 148 (247)
T 1tqh_A 95 LGGVFSLKLGYTVP--IEGIVTMCAPMYIKS-----EETMYE----GVLEYAREYKK-R-------------EGKSEEQ- 148 (247)
T ss_dssp HHHHHHHHHHTTSC--CSCEEEESCCSSCCC-----HHHHHH----HHHHHHHHHHH-H-------------HTCCHHH-
T ss_pred HHHHHHHHHHHhCC--CCeEEEEcceeecCc-----chhhhH----HHHHHHHHhhc-c-------------cccchHH-
Confidence 99999999999998 999998776432110 000000 00000000000 0 0011111
Q ss_pred hhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCC--
Q 012190 331 LEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQN-- 408 (468)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~-- 408 (468)
.......+. . .....+.. +..........+.++++|+|+|+|++|.++|++ ..+.+.+.+++
T Consensus 149 ~~~~~~~~~----------~-~~~~~~~~----~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~~-~~~~~~~~~~~~~ 212 (247)
T 1tqh_A 149 IEQEMEKFK----------Q-TPMKTLKA----LQELIADVRDHLDLIYAPTFVVQARHDEMINPD-SANIIYNEIESPV 212 (247)
T ss_dssp HHHHHHHHT----------T-SCCTTHHH----HHHHHHHHHHTGGGCCSCEEEEEETTCSSSCTT-HHHHHHHHCCCSS
T ss_pred HHhhhhccc----------C-CCHHHHHH----HHHHHHHHHhhcccCCCCEEEEecCCCCCCCcc-hHHHHHHhcCCCc
Confidence 111111000 0 01111111 111112234677899999999999999999999 79999999986
Q ss_pred cEEEEeCCCCccccccC-cHHHHHHHHhcCcccc
Q 012190 409 CIVRNFKDNGHTLLLEE-GISLLTIIKGTCKYRR 441 (468)
Q Consensus 409 ~~~~~i~~aGH~~~~e~-p~~~~~~I~~~~F~~r 441 (468)
+++++++++||++++|. |+++++.|. +|+++
T Consensus 213 ~~~~~~~~~gH~~~~e~~~~~~~~~i~--~Fl~~ 244 (247)
T 1tqh_A 213 KQIKWYEQSGHVITLDQEKDQLHEDIY--AFLES 244 (247)
T ss_dssp EEEEEETTCCSSGGGSTTHHHHHHHHH--HHHHH
T ss_pred eEEEEeCCCceeeccCccHHHHHHHHH--HHHHh
Confidence 69999999999999985 799999999 66654
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-26 Score=221.70 Aligned_cols=256 Identities=16% Similarity=0.121 Sum_probs=154.0
Q ss_pred ccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCC---------hHHHHH
Q 012190 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP---------FEGLVK 226 (468)
Q Consensus 156 ~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss---------~~~~~~ 226 (468)
+...+|.. ++|...|.+ .++|+|||+||++++...|.++++.|+++|+|+++|+||||.|+ ++++++
T Consensus 10 ~~~~~g~~---l~~~~~g~~-~~~~~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~ 85 (285)
T 3bwx_A 10 WTSSDGLR---LHFRAYEGD-ISRPPVLCLPGLTRNARDFEDLATRLAGDWRVLCPEMRGRGDSDYAKDPMTYQPMQYLQ 85 (285)
T ss_dssp EECTTSCE---EEEEEECBC-TTSCCEEEECCTTCCGGGGHHHHHHHBBTBCEEEECCTTBTTSCCCSSGGGCSHHHHHH
T ss_pred eecCCCce---EEEEEcCCC-CCCCcEEEECCCCcchhhHHHHHHHhhcCCEEEeecCCCCCCCCCCCCccccCHHHHHH
Confidence 44556655 456655542 12678999999999999999999999889999999999999883 568899
Q ss_pred HHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCch--hHHhhHHH
Q 012190 227 FVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPD--ELHCAVPY 304 (468)
Q Consensus 227 dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 304 (468)
|+.++++++. .++++|+||||||.+|+.+|.++|++|+++|++++..................... .......
T Consensus 86 dl~~~l~~l~----~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 160 (285)
T 3bwx_A 86 DLEALLAQEG----IERFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGPEVSPEGLERIRGYVGQGRNFETWMHAAR- 160 (285)
T ss_dssp HHHHHHHHHT----CCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHTTCCCEESSHHHHHH-
T ss_pred HHHHHHHhcC----CCceEEEEeCHHHHHHHHHHHhCchheeEEEEecCCcccCcchhHHHHHHhcCCcccccHHHHHH-
Confidence 9999999854 34899999999999999999999999999999876432211000000000000000 0000000
Q ss_pred HhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchh------cchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccC
Q 012190 305 LLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPAL------LPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAV 378 (468)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i 378 (468)
.+....... ................+... ..........+....... ........+..+
T Consensus 161 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 225 (285)
T 3bwx_A 161 ALQESSGDV--------YPDWDITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPVGAT-------PQVDMWPLFDAL 225 (285)
T ss_dssp HHHHHHTTT--------STTCCHHHHHHHHHHHEEECTTSCEEESBCGGGGCCTTSCTTCC-------CSSCCHHHHHHH
T ss_pred HHHHhhhhc--------ccccChHHHHHHHHhhheeCCCCceeeccCHHHHHHHhhhhhcc-------ccchhhHHHHHc
Confidence 000000000 00011100000000000000 000000000000000000 000000112333
Q ss_pred -CceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 379 -KAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 379 -~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
++|+|+|+|++|.+++++ ..+.+.+. +++++++++++||++++|+|+.+. .|. +|+.
T Consensus 226 ~~~P~lii~G~~D~~~~~~-~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~-~i~--~fl~ 283 (285)
T 3bwx_A 226 ATRPLLVLRGETSDILSAQ-TAAKMASR-PGVELVTLPRIGHAPTLDEPESIA-AIG--RLLE 283 (285)
T ss_dssp TTSCEEEEEETTCSSSCHH-HHHHHHTS-TTEEEEEETTCCSCCCSCSHHHHH-HHH--HHHT
T ss_pred cCCCeEEEEeCCCCccCHH-HHHHHHhC-CCcEEEEeCCCCccchhhCchHHH-HHH--HHHH
Confidence 799999999999999998 68999988 999999999999999999999874 666 4654
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-26 Score=216.79 Aligned_cols=237 Identities=13% Similarity=0.076 Sum_probs=151.1
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhhc-CCeEEEEecCCCCCCC--------ChHHHHHHHHHHHHHHhhcCCCCcEEEEEe
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSPEKPIYLVGD 249 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~-~~~~V~~~D~~G~G~S--------s~~~~~~dl~~~i~~~~~~~~~~~i~LvGh 249 (468)
+|+|||+||++++...|..+++.|. ++|+|+++|+||||.| +++++++++.++++++.. .++++|+||
T Consensus 4 g~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~---~~~~~lvGh 80 (258)
T 3dqz_A 4 KHHFVLVHNAYHGAWIWYKLKPLLESAGHRVTAVELAASGIDPRPIQAVETVDEYSKPLIETLKSLPE---NEEVILVGF 80 (258)
T ss_dssp CCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSSCGGGCCSHHHHHHHHHHHHHTSCT---TCCEEEEEE
T ss_pred CCcEEEECCCCCccccHHHHHHHHHhCCCEEEEecCCCCcCCCCCCCccccHHHhHHHHHHHHHHhcc---cCceEEEEe
Confidence 5899999999999999999999994 4799999999999988 478889999999987421 269999999
Q ss_pred ChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhh-CchhHHhhHHH------HhhhhcCChhhHHHHhhc
Q 012190 250 SFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKA-MPDELHCAVPY------LLSYVMGDPIKMAMVNIE 322 (468)
Q Consensus 250 S~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 322 (468)
||||.+++.+|.++|++++++|++++.................. ........... ........+ ........
T Consensus 81 S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 159 (258)
T 3dqz_A 81 SFGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLDKYMEMPGGLGDCEFSSHETRNGTMSLLKMGP-KFMKARLY 159 (258)
T ss_dssp TTHHHHHHHHHTTCGGGEEEEEEESCCCCCSSSCTTHHHHHHHTSTTCCTTCEEEEEEETTEEEEEEECCH-HHHHHHTS
T ss_pred ChhHHHHHHHHHhChHhhcEEEEecCCCCCCCCcchHHHHHhcccchhhhhcccchhhhhccChhhhhhhH-HHHHHHhh
Confidence 99999999999999999999999998654332222111111110 00000000000 000000000 00000000
Q ss_pred cCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHH
Q 012190 323 NRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRL 402 (468)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l 402 (468)
....... ......... ....+.. .+..... .......++|+++|+|++|.++|++ ..+.+
T Consensus 160 ~~~~~~~-~~~~~~~~~-------------~~~~~~~---~~~~~~~--~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~ 219 (258)
T 3dqz_A 160 QNCPIED-YELAKMLHR-------------QGSFFTE---DLSKKEK--FSEEGYGSVQRVYVMSSEDKAIPCD-FIRWM 219 (258)
T ss_dssp TTSCHHH-HHHHHHHCC-------------CEECCHH---HHHTSCC--CCTTTGGGSCEEEEEETTCSSSCHH-HHHHH
T ss_pred ccCCHHH-HHHHHHhcc-------------CCchhhh---hhhcccc--ccccccccCCEEEEECCCCeeeCHH-HHHHH
Confidence 0010000 000000000 0000000 0000000 0111233799999999999999999 79999
Q ss_pred HHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 403 NNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 403 ~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
.+.++++++++++++||++++|+|+++++.|. .|+++
T Consensus 220 ~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~--~fl~~ 256 (258)
T 3dqz_A 220 IDNFNVSKVYEIDGGDHMVMLSKPQKLFDSLS--AIATD 256 (258)
T ss_dssp HHHSCCSCEEEETTCCSCHHHHSHHHHHHHHH--HHHHH
T ss_pred HHhCCcccEEEcCCCCCchhhcChHHHHHHHH--HHHHH
Confidence 99999999999999999999999999999999 55543
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.4e-26 Score=218.85 Aligned_cols=245 Identities=13% Similarity=0.091 Sum_probs=148.9
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC--------ChHHHHHHHHHHHHHHhhcCCCCcEEEEE
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSPEKPIYLVG 248 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S--------s~~~~~~dl~~~i~~~~~~~~~~~i~LvG 248 (468)
++|+|||+||++++...|..+++.| ..+|+|+++|+||||.| +++++++++.++++.+. ..++++|+|
T Consensus 3 ~~~~vvllHG~~~~~~~w~~~~~~L~~~g~rVia~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~---~~~~~~lvG 79 (273)
T 1xkl_A 3 EGKHFVLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLMELMESLS---ADEKVILVG 79 (273)
T ss_dssp CCCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEECCCTTSTTCCCCGGGCCSHHHHHHHHHHHHHTSC---SSSCEEEEE
T ss_pred CCCeEEEECCCCCCcchHHHHHHHHHhCCCEEEEecCCCCCCCccCcccccCHHHHHHHHHHHHHHhc---cCCCEEEEe
Confidence 4679999999999999999999999 56899999999999988 47889999999998732 135899999
Q ss_pred eChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcch-HHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCCh
Q 012190 249 DSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLF-PILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPP 327 (468)
Q Consensus 249 hS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (468)
|||||.+++.+|.++|++|+++|++++............. ......+... ..... ......+... ........
T Consensus 80 hSmGG~va~~~a~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~---~~~~~~~~ 153 (273)
T 1xkl_A 80 HSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAEN--WLDTQ-FLPYGSPEEP---LTSMFFGP 153 (273)
T ss_dssp ETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTT--TTTCE-EEECSCTTSC---CEEEECCH
T ss_pred cCHHHHHHHHHHHhChHhheEEEEEeccCCCCCCcHHHHHHHhhccCChhh--HHHHH-HhhccCCCCC---ccccccCH
Confidence 9999999999999999999999999975321111110000 1111111000 00000 0000000000 00000000
Q ss_pred hHHhhhhhhhcchh-cchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhC
Q 012190 328 RIKLEQLSNNLPAL-LPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSL 406 (468)
Q Consensus 328 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l 406 (468)
......+....... ......... +...... .+.... .. ......++|+|+|+|++|.++|++ ..+.+.+.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~-~~-~~~~~~~~P~l~i~G~~D~~~p~~-~~~~~~~~~ 225 (273)
T 1xkl_A 154 KFLAHKLYQLCSPEDLALASSLVR--PSSLFME---DLSKAK-YF-TDERFGSVKRVYIVCTEDKGIPEE-FQRWQIDNI 225 (273)
T ss_dssp HHHHHHTSTTSCHHHHHHHHHHCC--CBCCCHH---HHHHCC-CC-CTTTGGGSCEEEEEETTCTTTTHH-HHHHHHHHH
T ss_pred HHHHHHhhccCCHHHHHHHHHhcC--CCchhhh---hhhccc-cc-chhhhCCCCeEEEEeCCccCCCHH-HHHHHHHhC
Confidence 00000000000000 000000000 0000000 000000 00 000124689999999999999999 689999999
Q ss_pred CCcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 407 QNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 407 ~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
|++++++++++||++++|+|+++++.|. +|+++
T Consensus 226 p~~~~~~i~~aGH~~~~e~P~~~~~~i~--~fl~~ 258 (273)
T 1xkl_A 226 GVTEAIEIKGADHMAMLCEPQKLCASLL--EIAHK 258 (273)
T ss_dssp CCSEEEEETTCCSCHHHHSHHHHHHHHH--HHHHH
T ss_pred CCCeEEEeCCCCCCchhcCHHHHHHHHH--HHHHH
Confidence 9999999999999999999999999999 66654
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.5e-26 Score=219.23 Aligned_cols=250 Identities=16% Similarity=0.106 Sum_probs=154.1
Q ss_pred CCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHh-HhhhcC-CeEEEEecCCCCCCCC----------hHHHH
Q 012190 158 KPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILH-HKPLGK-AFEVRCLHIPVYDRTP----------FEGLV 225 (468)
Q Consensus 158 ~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~-~~~L~~-~~~V~~~D~~G~G~Ss----------~~~~~ 225 (468)
..+|.. ++|...|. +++|+|||+||++++...|.+. ++.|.+ +|+|+++|+||||.|+ +++++
T Consensus 7 ~~~g~~---l~y~~~G~--~~~~~vvllHG~~~~~~~w~~~~~~~L~~~G~~vi~~D~rG~G~S~~~~~~~~~~~~~~~a 81 (298)
T 1q0r_A 7 PSGDVE---LWSDDFGD--PADPALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHPYGFGELA 81 (298)
T ss_dssp EETTEE---EEEEEESC--TTSCEEEEECCTTCCGGGSCHHHHHHHHTTTCEEEEECCTTSTTSCCCCTTTSCCCHHHHH
T ss_pred ccCCeE---EEEEeccC--CCCCeEEEEcCCCCCccchHHHHHHHHHhCCCEEEeeCCCCCCCCCCCCCCcCCcCHHHHH
Confidence 345544 46666664 2478999999999999999874 488965 5999999999999873 57899
Q ss_pred HHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC-CCCCC--------------CcC-cchH
Q 012190 226 KFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT-SFGRS--------------QLQ-PLFP 289 (468)
Q Consensus 226 ~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~-~~~~~--------------~~~-~~~~ 289 (468)
+|+.++++++ +.++++|+||||||.+|+.+|.++|++|+++|++++.. ..... ... ....
T Consensus 82 ~dl~~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (298)
T 1q0r_A 82 ADAVAVLDGW----GVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQP 157 (298)
T ss_dssp HHHHHHHHHT----TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSCCCCHH
T ss_pred HHHHHHHHHh----CCCceEEEEeCcHHHHHHHHHHhCchhhheeEEecccCCCcccccchhhhhhhhhhhcccccccHH
Confidence 9999999985 44589999999999999999999999999999999865 21000 000 0000
Q ss_pred HHhhCch------hHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHH
Q 012190 290 ILKAMPD------ELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKL 363 (468)
Q Consensus 290 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 363 (468)
.+..+.. ............. . .........+.......+...+.... .... +....+ ..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~----~~ 222 (298)
T 1q0r_A 158 FLDALALMNQPAEGRAAEVAKRVSKW-----R-ILSGTGVPFDDAEYARWEERAIDHAG-GVLA----EPYAHY----SL 222 (298)
T ss_dssp HHHHHHHHHSCCCSHHHHHHHHHHHH-----H-HHHCSSSCCCHHHHHHHHHHHHHHTT-TCCS----CCCGGG----GC
T ss_pred HHHHHhccCcccccHHHHHHHHHHhh-----h-hccCCCCCCCHHHHHHHHHHHhhccC-Cccc----hhhhhh----hh
Confidence 0000000 0000000000000 0 00000000111111111111000000 0000 000000 00
Q ss_pred HHHHhHHHhhh-cccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 364 LKSASAYANSR-LHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 364 ~~~~~~~~~~~-l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
. ........ +.++++|+|+|+|++|.++|++ ..+.+.+.+|++++++++++|| |.|+++++.|. +|+.
T Consensus 223 ~--~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~~~-~~~~~~~~~p~~~~~~i~~~gH----e~p~~~~~~i~--~fl~ 291 (298)
T 1q0r_A 223 T--LPPPSRAAELREVTVPTLVIQAEHDPIAPAP-HGKHLAGLIPTARLAEIPGMGH----ALPSSVHGPLA--EVIL 291 (298)
T ss_dssp C--CCCGGGGGGGGGCCSCEEEEEETTCSSSCTT-HHHHHHHTSTTEEEEEETTCCS----SCCGGGHHHHH--HHHH
T ss_pred h--cCcccccccccccCCCEEEEEeCCCccCCHH-HHHHHHHhCCCCEEEEcCCCCC----CCcHHHHHHHH--HHHH
Confidence 0 00011245 7889999999999999999999 6999999999999999999999 78999999998 4554
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=8.9e-27 Score=219.09 Aligned_cols=239 Identities=12% Similarity=0.077 Sum_probs=151.2
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhcC-CeEEEEecCCCCCCC--------ChHHHHHHHHHHHHHHhhcCCCCcEEEEE
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLGK-AFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSPEKPIYLVG 248 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~-~~~V~~~D~~G~G~S--------s~~~~~~dl~~~i~~~~~~~~~~~i~LvG 248 (468)
++|+|||+||++++...|..+++.|.+ +|+|+++|+||||.| +++++++++.++++++. ..++++|+|
T Consensus 11 ~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~l~~l~---~~~~~~lvG 87 (267)
T 3sty_A 11 VKKHFVLVHAAFHGAWCWYKIVALMRSSGHNVTALDLGASGINPKQALQIPNFSDYLSPLMEFMASLP---ANEKIILVG 87 (267)
T ss_dssp CCCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHHHHHHHHHHTSC---TTSCEEEEE
T ss_pred CCCeEEEECCCCCCcchHHHHHHHHHhcCCeEEEeccccCCCCCCcCCccCCHHHHHHHHHHHHHhcC---CCCCEEEEE
Confidence 578999999999999999999999954 799999999999988 47888999999998741 356999999
Q ss_pred eChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHh-hCchhHHhhHHH--Hh----hhhcCChhhHHHHhh
Q 012190 249 DSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILK-AMPDELHCAVPY--LL----SYVMGDPIKMAMVNI 321 (468)
Q Consensus 249 hS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~~ 321 (468)
|||||.+++.+|.++|++|+++|++++................. .........+.. .. ......+ .......
T Consensus 88 hS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 166 (267)
T 3sty_A 88 HALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDATTVCTKAGSAVLGQLDNCVTYENGPTNPPTTLIAGP-KFLATNV 166 (267)
T ss_dssp ETTHHHHHHHHHHHSGGGEEEEEEESCCCCBTTBCHHHHHHHHHHTTTTCTTCEEECTTCTTSCCCEEECCH-HHHHHHT
T ss_pred EcHHHHHHHHHHHhChhhcceEEEecCCCCCCcchHHHHHHHhcccchhhhhhhhhhhhhhhcccchhhhhH-HHHHHhh
Confidence 99999999999999999999999999866432221111110000 000000000000 00 0000000 0000000
Q ss_pred ccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHH
Q 012190 322 ENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKR 401 (468)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~ 401 (468)
........ ....... ........ ...+..... .......++|+++|+|++|.+++++ ..+.
T Consensus 167 ~~~~~~~~-~~~~~~~--------------~~~~~~~~-~~~~~~~~~--~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~ 227 (267)
T 3sty_A 167 YHLSPIED-LALATAL--------------VRPLYLYL-AEDISKEVV--LSSKRYGSVKRVFIVATENDALKKE-FLKL 227 (267)
T ss_dssp STTSCHHH-HHHHHHH--------------CCCEECCC-HHHHHHHCC--CCTTTGGGSCEEEEECCCSCHHHHH-HHHH
T ss_pred cccCCHHH-HHHHHHh--------------hccchhHH-HHHhhcchh--cccccccCCCEEEEEeCCCCccCHH-HHHH
Confidence 00000000 0000000 00000000 000000000 0111223699999999999999999 7999
Q ss_pred HHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 402 LNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 402 l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
+.+.++++++++++++||++++|+|+++++.|. .|+++
T Consensus 228 ~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~~ 265 (267)
T 3sty_A 228 MIEKNPPDEVKEIEGSDHVTMMSKPQQLFTTLL--SIANK 265 (267)
T ss_dssp HHHHSCCSEEEECTTCCSCHHHHSHHHHHHHHH--HHHHH
T ss_pred HHHhCCCceEEEeCCCCccccccChHHHHHHHH--HHHHh
Confidence 999999999999999999999999999999999 56654
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A | Back alignment and structure |
|---|
Probab=99.94 E-value=9.8e-27 Score=222.89 Aligned_cols=262 Identities=11% Similarity=0.004 Sum_probs=164.9
Q ss_pred ccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC-----------ChHHH
Q 012190 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-----------PFEGL 224 (468)
Q Consensus 156 ~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-----------s~~~~ 224 (468)
+...+|.. ++|...|+ +|+|||+||++++...|..+++.|.+.|+|+++|+||||.| +++++
T Consensus 13 ~~~~~g~~---l~~~~~g~----~~~vv~lHG~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 85 (302)
T 1mj5_A 13 FIEIKGRR---MAYIDEGT----GDPILFQHGNPTSSYLWRNIMPHCAGLGRLIACDLIGMGDSDKLDPSGPERYAYAEH 85 (302)
T ss_dssp EEEETTEE---EEEEEESC----SSEEEEECCTTCCGGGGTTTGGGGTTSSEEEEECCTTSTTSCCCSSCSTTSSCHHHH
T ss_pred EEEECCEE---EEEEEcCC----CCEEEEECCCCCchhhhHHHHHHhccCCeEEEEcCCCCCCCCCCCCCCcccccHHHH
Confidence 33445544 45666665 68999999999999999999999988899999999999976 46788
Q ss_pred HHHHHHHHHHHhhcCCC-CcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCC-CcCc-chHHHhhCchh-HHh
Q 012190 225 VKFVEETVRREHASSPE-KPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRS-QLQP-LFPILKAMPDE-LHC 300 (468)
Q Consensus 225 ~~dl~~~i~~~~~~~~~-~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~-~~~~-~~~~~~~~~~~-~~~ 300 (468)
++++.++++++ .. ++++|+||||||.+|+.+|.++|++|+++|+++|....... .... .......+... ...
T Consensus 86 ~~~~~~~l~~l----~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (302)
T 1mj5_A 86 RDYLDALWEAL----DLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQAGEE 161 (302)
T ss_dssp HHHHHHHHHHT----TCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHHSTTHHH
T ss_pred HHHHHHHHHHh----CCCceEEEEEECCccHHHHHHHHHCHHHHhheeeecccCCchhhhhhhHHHHHHHHHHhccchhh
Confidence 99999999984 33 68999999999999999999999999999999986642210 0000 00111100000 000
Q ss_pred hH---HHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchh---cchhhhhhccCCcchhHHHHHHHHHHhHHHhhh
Q 012190 301 AV---PYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPAL---LPRLSVMSDIIPKDTLLWKLKLLKSASAYANSR 374 (468)
Q Consensus 301 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 374 (468)
.. ...+..... .......+.+. ...+...+... ..........+........ +..........
T Consensus 162 ~~~~~~~~~~~~~~-------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 230 (302)
T 1mj5_A 162 LVLQDNVFVEQVLP-------GLILRPLSEAE-MAAYREPFLAAGEARRPTLSWPRQIPIAGTPAD---VVAIARDYAGW 230 (302)
T ss_dssp HHTTTCHHHHTHHH-------HTSSSCCCHHH-HHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHH---HHHHHHHHHHH
T ss_pred hhcChHHHHHHHHH-------hcCcccCCHHH-HHHHHHHhhcccccccchHHHHHhccccccchh---hHHHHHHHHhh
Confidence 00 000000000 00001111111 11111111000 0000000000100000000 00111122456
Q ss_pred cccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccccCC
Q 012190 375 LHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSRK 444 (468)
Q Consensus 375 l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r~~~ 444 (468)
+.++++|+|+|+|++|.++|++ ..+.+.+.+++ +++++ ++||++++|+|+++++.|. +|+++...
T Consensus 231 l~~i~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~-~~~~~-~~gH~~~~e~p~~~~~~i~--~fl~~~~~ 295 (302)
T 1mj5_A 231 LSESPIPKLFINAEPGALTTGR-MRDFCRTWPNQ-TEITV-AGAHFIQEDSPDEIGAAIA--AFVRRLRP 295 (302)
T ss_dssp HTTCCSCEEEEEEEECSSSSHH-HHHHHTTCSSE-EEEEE-EESSCGGGTCHHHHHHHHH--HHHHHHSC
T ss_pred hhccCCCeEEEEeCCCCCCChH-HHHHHHHhcCC-ceEEe-cCcCcccccCHHHHHHHHH--HHHHhhcc
Confidence 6889999999999999999998 79999999999 99999 9999999999999999999 67766544
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A | Back alignment and structure |
|---|
Probab=99.94 E-value=7.6e-27 Score=222.77 Aligned_cols=242 Identities=10% Similarity=0.023 Sum_probs=154.2
Q ss_pred eeecCCCCCCCCCCeEEEeCCCCCchhh-HHH-----hHhhhcCCeEEEEecCCCCCCC-----------ChHHHHHHHH
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLG-LIL-----HHKPLGKAFEVRCLHIPVYDRT-----------PFEGLVKFVE 229 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~~s~~~-~~~-----~~~~L~~~~~V~~~D~~G~G~S-----------s~~~~~~dl~ 229 (468)
++|...|.+..++|+|||+||++++... |.. +++.|+++|+|+++|+||||.| +++++++++.
T Consensus 23 l~y~~~G~~~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~ 102 (286)
T 2qmq_A 23 VTFTVYGTPKPKRPAIFTYHDVGLNYKSCFQPLFRFGDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIP 102 (286)
T ss_dssp EEEEEESCCCTTCCEEEEECCTTCCHHHHHHHHHTSHHHHHHHTTSCEEEEECTTTSTTCCCCCTTCCCCCHHHHHHTHH
T ss_pred EEEEeccCCCCCCCeEEEeCCCCCCchhhhhhhhhhchhHHHhcCCCEEEecCCCCCCCCCCCCCCCCccCHHHHHHHHH
Confidence 5666677643358899999999999885 665 7888888899999999999864 5788899999
Q ss_pred HHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhC-chhHHhhHHHHhhh
Q 012190 230 ETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAM-PDELHCAVPYLLSY 308 (468)
Q Consensus 230 ~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 308 (468)
++++.+. .++++|+||||||.+|+.+|.++|++++++|+++|...... ........ ..............
T Consensus 103 ~~l~~l~----~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 173 (286)
T 2qmq_A 103 CILQYLN----FSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAKG-----WMDWAAHKLTGLTSSIPDMILGH 173 (286)
T ss_dssp HHHHHHT----CCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCC-----HHHHHHHHHHHTTSCHHHHHHHH
T ss_pred HHHHHhC----CCcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCCcccc-----hhhhhhhhhccccccchHHHHHH
Confidence 9998854 34899999999999999999999999999999998653211 11111000 00000000000000
Q ss_pred hcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHH--HhhhcccCCceEEEEE
Q 012190 309 VMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAY--ANSRLHAVKAEVLVLA 386 (468)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~l~~i~~PvLlI~ 386 (468)
....... . ..+ ...+.+...+. ..............+...... ....+..+++|+|+|+
T Consensus 174 ~~~~~~~-------~-~~~-~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~ 234 (286)
T 2qmq_A 174 LFSQEEL-------S-GNS-ELIQKYRGIIQ----------HAPNLENIELYWNSYNNRRDLNFERGGETTLKCPVMLVV 234 (286)
T ss_dssp HSCHHHH-------H-TTC-HHHHHHHHHHH----------TCTTHHHHHHHHHHHHTCCCCCSEETTEECCCSCEEEEE
T ss_pred HhcCCCC-------C-cch-HHHHHHHHHHH----------hcCCcchHHHHHHHHhhhhhhhhhhchhccCCCCEEEEe
Confidence 0000000 0 000 00111111000 000111111111111110000 0235678999999999
Q ss_pred eCCCCCCCcHHHHHHHHHhCC-CcEEEEeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 387 SGKDNMLPSEDEAKRLNNSLQ-NCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 387 G~~D~~v~~~~~~~~l~~~l~-~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
|++|.++| . ..+.+.+..+ ++++++++++||++++|+|+++++.|. +|++
T Consensus 235 G~~D~~~~-~-~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~--~fl~ 285 (286)
T 2qmq_A 235 GDQAPHED-A-VVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTEAFK--YFLQ 285 (286)
T ss_dssp ETTSTTHH-H-HHHHHHHSCGGGEEEEEETTCTTCHHHHCHHHHHHHHH--HHHC
T ss_pred cCCCcccc-H-HHHHHHHhcCCCceEEEeCCCCCcccccChHHHHHHHH--HHhc
Confidence 99999998 4 4677777777 899999999999999999999999999 5553
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.1e-26 Score=216.01 Aligned_cols=212 Identities=14% Similarity=0.159 Sum_probs=149.0
Q ss_pred CCCeEEEeCCCCCc--hhhHHHhHhhh-cCCeEEEEecCCCCCCCC-------hHHHHHHHHHHHHHHhhcCCCCcEEEE
Q 012190 178 GSPTLLFLPGIDGL--GLGLILHHKPL-GKAFEVRCLHIPVYDRTP-------FEGLVKFVEETVRREHASSPEKPIYLV 247 (468)
Q Consensus 178 ~~p~lV~lHG~~~s--~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss-------~~~~~~dl~~~i~~~~~~~~~~~i~Lv 247 (468)
++|+|||+||++++ ...|..+++.| ..+|+|+++|+||||.|+ ++++++|+.++++.+......++++|+
T Consensus 26 ~~p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~lv 105 (251)
T 2wtm_A 26 KCPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADMYGHGKSDGKFEDHTLFKWLTNILAVVDYAKKLDFVTDIYMA 105 (251)
T ss_dssp SEEEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTSSSCGGGCCHHHHHHHHHHHHHHHTTCTTEEEEEEE
T ss_pred CCCEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEecCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcccceEEEE
Confidence 46789999999999 88999999999 568999999999999883 577899999999987643233589999
Q ss_pred EeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCCh
Q 012190 248 GDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPP 327 (468)
Q Consensus 248 GhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (468)
||||||.+|+.+|.++|++++++|+++|...... ..... ...+..+. ....
T Consensus 106 GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~-------~~~~~--------------~~~~~~~~------~~~~-- 156 (251)
T 2wtm_A 106 GHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPE-------IARTG--------------ELLGLKFD------PENI-- 156 (251)
T ss_dssp EETHHHHHHHHHHHHTTTTEEEEEEESCCTTHHH-------HHHHT--------------EETTEECB------TTBC--
T ss_pred EECcchHHHHHHHHhCcccceEEEEECcHHHhHH-------HHhhh--------------hhccccCC------chhc--
Confidence 9999999999999999999999999988542100 00000 00000000 0000
Q ss_pred hHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC
Q 012190 328 RIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ 407 (468)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~ 407 (468)
......+.. ... ...+ ...+... .....+.++++|+|+|+|++|.++|++ ..+.+.+.++
T Consensus 157 ----~~~~~~~~~---------~~~-~~~~---~~~~~~~--~~~~~~~~i~~P~lii~G~~D~~v~~~-~~~~~~~~~~ 216 (251)
T 2wtm_A 157 ----PDELDAWDG---------RKL-KGNY---VRVAQTI--RVEDFVDKYTKPVLIVHGDQDEAVPYE-ASVAFSKQYK 216 (251)
T ss_dssp ----CSEEEETTT---------EEE-ETHH---HHHHTTC--CHHHHHHHCCSCEEEEEETTCSSSCHH-HHHHHHHHSS
T ss_pred ----chHHhhhhc---------ccc-chHH---HHHHHcc--CHHHHHHhcCCCEEEEEeCCCCCcChH-HHHHHHHhCC
Confidence 000000000 000 0000 0000000 112345678999999999999999999 7999999999
Q ss_pred CcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 408 NCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 408 ~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
++++++++++||++ .|+|+++.+.|. +|+.+
T Consensus 217 ~~~~~~~~~~gH~~-~~~~~~~~~~i~--~fl~~ 247 (251)
T 2wtm_A 217 NCKLVTIPGDTHCY-DHHLELVTEAVK--EFMLE 247 (251)
T ss_dssp SEEEEEETTCCTTC-TTTHHHHHHHHH--HHHHH
T ss_pred CcEEEEECCCCccc-chhHHHHHHHHH--HHHHH
Confidence 99999999999999 999999999999 55544
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... | Back alignment and structure |
|---|
Probab=99.94 E-value=7.7e-27 Score=220.19 Aligned_cols=235 Identities=11% Similarity=0.038 Sum_probs=146.7
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhhc-CCeEEEEecCCCCCCC--------ChHHHHHHHHHHHHHHhhcCCCCcEEEEEe
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSPEKPIYLVGD 249 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~-~~~~V~~~D~~G~G~S--------s~~~~~~dl~~~i~~~~~~~~~~~i~LvGh 249 (468)
+++|||+||++.+...|..+++.|. .+|+|+++|+||||.| +++++++++.++++.+. ..++++|+||
T Consensus 3 ~~~vvllHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~---~~~~~~lvGh 79 (257)
T 3c6x_A 3 FAHFVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEALP---PGEKVILVGE 79 (257)
T ss_dssp CCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHTHHHHHHHHTSC---TTCCEEEEEE
T ss_pred CCcEEEEcCCccCcCCHHHHHHHHHhCCCEEEEeCCCCCCCCCCCcccccCHHHHHHHHHHHHHhcc---ccCCeEEEEE
Confidence 5789999999999999999999994 6899999999999988 47889999999998732 2358999999
Q ss_pred ChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcc-hHHHhhCchhHHhhHHHHhh-------hhcCChhhHHHHhh
Q 012190 250 SFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPL-FPILKAMPDELHCAVPYLLS-------YVMGDPIKMAMVNI 321 (468)
Q Consensus 250 S~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 321 (468)
||||.+++.+|.++|++|+++|++++............ .......+..... ....+. .....+.... ...
T Consensus 80 SmGG~va~~~a~~~p~~v~~lVl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~ 157 (257)
T 3c6x_A 80 SCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDT-TYFTYTKDGKEITGLKLGFTLLR-ENL 157 (257)
T ss_dssp ETHHHHHHHHHHHHGGGEEEEEEEEECCCCSSSCTTHHHHHHHHHSCCCTTC-EEEEEEETTEEEEEEECCHHHHH-HHT
T ss_pred CcchHHHHHHHHhCchhhheEEEEecccCCCCCcchhHHHHHhhcCcchhhh-hhhhccCCCCccccccccHHHHH-HHH
Confidence 99999999999999999999999987532111111000 0111101100000 000000 0000000000 000
Q ss_pred ccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHH
Q 012190 322 ENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKR 401 (468)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~ 401 (468)
....+.. ....... .. .+....... +..... . ......++|+|+|+|++|.++|++ ..+.
T Consensus 158 ~~~~~~~--~~~~~~~----------~~--~~~~~~~~~---~~~~~~-~-~~~~~~~~P~l~i~G~~D~~~p~~-~~~~ 217 (257)
T 3c6x_A 158 YTLCGPE--EYELAKM----------LT--RKGSLFQNI---LAKRPF-F-TKEGYGSIKKIYVWTDQDEIFLPE-FQLW 217 (257)
T ss_dssp STTSCHH--HHHHHHH----------HC--CCBCCCHHH---HHHSCC-C-CTTTGGGSCEEEEECTTCSSSCHH-HHHH
T ss_pred hcCCCHH--HHHHHHH----------hc--CCCccchhh---hccccc-c-ChhhcCcccEEEEEeCCCcccCHH-HHHH
Confidence 0000000 0000000 00 000000000 000000 0 000113689999999999999999 6899
Q ss_pred HHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 402 LNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 402 l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
+.+.++++++++++++||++++|+|+++++.|. +|.+
T Consensus 218 ~~~~~~~~~~~~i~~~gH~~~~e~P~~~~~~l~--~f~~ 254 (257)
T 3c6x_A 218 QIENYKPDKVYKVEGGDHKLQLTKTKEIAEILQ--EVAD 254 (257)
T ss_dssp HHHHSCCSEEEECCSCCSCHHHHSHHHHHHHHH--HHHH
T ss_pred HHHHCCCCeEEEeCCCCCCcccCCHHHHHHHHH--HHHH
Confidence 999999999999999999999999999999999 4543
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.7e-26 Score=220.58 Aligned_cols=237 Identities=14% Similarity=0.123 Sum_probs=154.9
Q ss_pred eecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCC-CCC-------ChHHHHHHHHHHHHHHhhcC
Q 012190 168 CPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVY-DRT-------PFEGLVKFVEETVRREHASS 239 (468)
Q Consensus 168 ~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~-G~S-------s~~~~~~dl~~~i~~~~~~~ 239 (468)
+|...|. +++|+|||+||++++...|..+++.|.++|+|+++|+||| |.| +++++++++.++++.+
T Consensus 58 ~~~~~g~--~~~~~vv~lHG~~~~~~~~~~~~~~L~~g~~vi~~D~~G~gG~s~~~~~~~~~~~~~~~l~~~l~~l---- 131 (306)
T 2r11_A 58 HVIASGP--EDAPPLVLLHGALFSSTMWYPNIADWSSKYRTYAVDIIGDKNKSIPENVSGTRTDYANWLLDVFDNL---- 131 (306)
T ss_dssp EEEEESC--TTSCEEEEECCTTTCGGGGTTTHHHHHHHSEEEEECCTTSSSSCEECSCCCCHHHHHHHHHHHHHHT----
T ss_pred EEEeeCC--CCCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhc----
Confidence 4444554 2478999999999999999999999977999999999999 776 5789999999999984
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHH
Q 012190 240 PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMV 319 (468)
Q Consensus 240 ~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (468)
..++++|+||||||.+|+.+|.++|++|+++|+++|........................ ..+...+....
T Consensus 132 ~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~------ 202 (306)
T 2r11_A 132 GIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPFHHDFYKYALGLTASNGV---ETFLNWMMNDQ------ 202 (306)
T ss_dssp TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBTSCCCHHHHHHHHTTTSTTHH---HHHHHHHTTTC------
T ss_pred CCCceeEEEECHHHHHHHHHHHhCccceeeEEEEcCccccCcccHHHHHHHhHHHHHHHH---HHHHHHhhCCc------
Confidence 446899999999999999999999999999999999775422211100001111000000 00000000000
Q ss_pred hhccCCChhHH--hhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHH
Q 012190 320 NIENRLPPRIK--LEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSED 397 (468)
Q Consensus 320 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~ 397 (468)
....... .......+................. .....+.++++|+|+|+|++|.+++++
T Consensus 203 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~l~~i~~P~lii~G~~D~~~~~~- 263 (306)
T 2r11_A 203 ----NVLHPIFVKQFKAGVMWQDGSRNPNPNADGFPYV--------------FTDEELRSARVPILLLLGEHEVIYDPH- 263 (306)
T ss_dssp ----CCSCHHHHHHHHHHHHCCSSSCCCCCCTTSSSCB--------------CCHHHHHTCCSCEEEEEETTCCSSCHH-
T ss_pred ----cccccccccccHHHHHHHHhhhhhhhhccCCCCC--------------CCHHHHhcCCCCEEEEEeCCCcccCHH-
Confidence 0000000 0000000000000000000000000 012345788999999999999999988
Q ss_pred HHH-HHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 398 EAK-RLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 398 ~~~-~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
..+ .+.+.++++++++++++||++++|+|+++++.|. +|++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~--~fl~ 305 (306)
T 2r11_A 264 SALHRASSFVPDIEAEVIKNAGHVLSMEQPTYVNERVM--RFFN 305 (306)
T ss_dssp HHHHHHHHHSTTCEEEEETTCCTTHHHHSHHHHHHHHH--HHHC
T ss_pred HHHHHHHHHCCCCEEEEeCCCCCCCcccCHHHHHHHHH--HHHh
Confidence 566 4455789999999999999999999999999999 4543
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A | Back alignment and structure |
|---|
Probab=99.94 E-value=9.7e-27 Score=222.14 Aligned_cols=243 Identities=15% Similarity=0.156 Sum_probs=159.1
Q ss_pred eeecCCCCCCCCCCeEEEeCCCCCchhhHH-HhHhhh-cCCeEEEEecCCCCCCC------ChHHHHHHHHHHHHHHhhc
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLI-LHHKPL-GKAFEVRCLHIPVYDRT------PFEGLVKFVEETVRREHAS 238 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~-~~~~~L-~~~~~V~~~D~~G~G~S------s~~~~~~dl~~~i~~~~~~ 238 (468)
++|...|+ +|+|||+||++++...|. .++..| .++|+|+++|+||||.| +++++++++.++++.+.
T Consensus 35 l~y~~~g~----~~~vv~lHG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~l~~l~-- 108 (293)
T 3hss_A 35 LAYDDNGT----GDPVVFIAGRGGAGRTWHPHQVPAFLAAGYRCITFDNRGIGATENAEGFTTQTMVADTAALIETLD-- 108 (293)
T ss_dssp EEEEEECS----SEEEEEECCTTCCGGGGTTTTHHHHHHTTEEEEEECCTTSGGGTTCCSCCHHHHHHHHHHHHHHHT--
T ss_pred EEEEEcCC----CCEEEEECCCCCchhhcchhhhhhHhhcCCeEEEEccCCCCCCCCcccCCHHHHHHHHHHHHHhcC--
Confidence 56777775 789999999999999998 677777 78999999999999987 58999999999999863
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhh-HH
Q 012190 239 SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIK-MA 317 (468)
Q Consensus 239 ~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 317 (468)
.++++|+||||||.+|+.+|.++|++++++|+++|....... ........ ..+.......+.. ..
T Consensus 109 --~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-----~~~~~~~~-------~~~~~~~~~~~~~~~~ 174 (293)
T 3hss_A 109 --IAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRA-----RQFFNKAE-------AELYDSGVQLPPTYDA 174 (293)
T ss_dssp --CCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHH-----HHHHHHHH-------HHHHHHTCCCCHHHHH
T ss_pred --CCcEEEEeeCccHHHHHHHHHHChHHHHhhheecccccCChh-----hhHHHHHH-------HHHHhhcccchhhHHH
Confidence 458999999999999999999999999999999986533211 00000000 0000000000000 00
Q ss_pred HHhhccCCChh-----HHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCC
Q 012190 318 MVNIENRLPPR-----IKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNM 392 (468)
Q Consensus 318 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~ 392 (468)
........... .....+...... ............... .........+.++++|+|+|+|++|.+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~--~~~~~~~~~l~~i~~P~lii~g~~D~~ 244 (293)
T 3hss_A 175 RARLLENFSRKTLNDDVAVGDWIAMFSM--------WPIKSTPGLRCQLDC--APQTNRLPAYRNIAAPVLVIGFADDVV 244 (293)
T ss_dssp HHHHHHHSCHHHHTCHHHHHHHHHHHHH--------SCCCCCHHHHHHHTS--SCSSCCHHHHTTCCSCEEEEEETTCSS
T ss_pred HHHHhhhcccccccccccHHHHHHHHhh--------ccccccHHHHhHhhh--ccccchHHHHhhCCCCEEEEEeCCCCC
Confidence 00000000000 000000000000 000000000000000 000011245578999999999999999
Q ss_pred CCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCccccc
Q 012190 393 LPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRS 442 (468)
Q Consensus 393 v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r~ 442 (468)
+|++ ..+.+.+.++++++++++++||++++|+|+++++.|. +|+++.
T Consensus 245 ~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~--~fl~~~ 291 (293)
T 3hss_A 245 TPPY-LGREVADALPNGRYLQIPDAGHLGFFERPEAVNTAML--KFFASV 291 (293)
T ss_dssp SCHH-HHHHHHHHSTTEEEEEETTCCTTHHHHSHHHHHHHHH--HHHHTC
T ss_pred CCHH-HHHHHHHHCCCceEEEeCCCcchHhhhCHHHHHHHHH--HHHHhc
Confidence 9999 7999999999999999999999999999999999999 666653
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A | Back alignment and structure |
|---|
Probab=99.94 E-value=8.6e-27 Score=222.32 Aligned_cols=252 Identities=10% Similarity=0.008 Sum_probs=162.4
Q ss_pred cCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC-----------ChHHHH
Q 012190 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-----------PFEGLV 225 (468)
Q Consensus 157 ~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-----------s~~~~~ 225 (468)
+..+|.. ++|...|+ +|+|||+||++++...|..+++.|.++|+|+++|+||||.| ++++++
T Consensus 13 ~~~~g~~---l~~~~~g~----~~~vv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~ 85 (297)
T 2qvb_A 13 LEIAGKR---MAYIDEGK----GDAIVFQHGNPTSSYLWRNIMPHLEGLGRLVACDLIGMGASDKLSPSGPDRYSYGEQR 85 (297)
T ss_dssp EEETTEE---EEEEEESS----SSEEEEECCTTCCGGGGTTTGGGGTTSSEEEEECCTTSTTSCCCSSCSTTSSCHHHHH
T ss_pred EEECCEE---EEEEecCC----CCeEEEECCCCchHHHHHHHHHHHhhcCeEEEEcCCCCCCCCCCCCccccCcCHHHHH
Confidence 3445544 45666665 68999999999999999999999988899999999999986 467889
Q ss_pred HHHHHHHHHHhhcCCC-CcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCC-CcCc-chHHHhhCchh-HHhh
Q 012190 226 KFVEETVRREHASSPE-KPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRS-QLQP-LFPILKAMPDE-LHCA 301 (468)
Q Consensus 226 ~dl~~~i~~~~~~~~~-~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~-~~~~-~~~~~~~~~~~-~~~~ 301 (468)
+++.++++++ .. ++++|+||||||.+++.+|.++|++++++|+++|....... .... .......+... ....
T Consensus 86 ~~~~~~l~~~----~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (297)
T 2qvb_A 86 DFLFALWDAL----DLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMTWADWPPAVRGVFQGFRSPQGEPM 161 (297)
T ss_dssp HHHHHHHHHT----TCCSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHTSTTHHHH
T ss_pred HHHHHHHHHc----CCCCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccCCccCCCCChHHHHHHHHHhcccchhh
Confidence 9999999884 34 68999999999999999999999999999999986642210 0000 00111100000 0000
Q ss_pred H---HHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHH---------HHHHhH
Q 012190 302 V---PYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKL---------LKSASA 369 (468)
Q Consensus 302 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---------~~~~~~ 369 (468)
. ...+..+.. .........+. ...+...+.... ............ +.....
T Consensus 162 ~~~~~~~~~~~~~-------~~~~~~~~~~~-~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (297)
T 2qvb_A 162 ALEHNIFVERVLP-------GAILRQLSDEE-MNHYRRPFVNGG---------EDRRPTLSWPRNLPIDGEPAEVVALVN 224 (297)
T ss_dssp HHTTCHHHHTHHH-------HTCSSCCCHHH-HHHHHGGGCSSS---------GGGHHHHHHHHHSCBTTBSHHHHHHHH
T ss_pred hccccHHHHHHHh-------ccccccCCHHH-HHHHHHHhcCcc---------cchhhHHHHHHhccccCCchhhHHHHH
Confidence 0 000000000 00001111111 111111110000 000000000000 001112
Q ss_pred HHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 370 YANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 370 ~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
.....+.++++|+|+|+|++|.+++++ ..+.+.+.+++ +++++ ++||++++|+|+++++.|. .|+++
T Consensus 225 ~~~~~l~~i~~P~lii~G~~D~~~~~~-~~~~~~~~~~~-~~~~~-~~gH~~~~~~p~~~~~~i~--~fl~~ 291 (297)
T 2qvb_A 225 EYRSWLEETDMPKLFINAEPGAIITGR-IRDYVRSWPNQ-TEITV-PGVHFVQEDSPEEIGAAIA--QFVRR 291 (297)
T ss_dssp HHHHHHHHCCSCEEEEEEEECSSSCHH-HHHHHHTSSSE-EEEEE-EESSCGGGTCHHHHHHHHH--HHHHH
T ss_pred HHHhhcccccccEEEEecCCCCcCCHH-HHHHHHHHcCC-eEEEe-cCccchhhhCHHHHHHHHH--HHHHH
Confidence 224556789999999999999999999 79999999999 99999 9999999999999999999 56654
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.4e-25 Score=205.92 Aligned_cols=229 Identities=17% Similarity=0.164 Sum_probs=154.5
Q ss_pred eecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC------ChHHHHHHHHHHHHHHhh--cC
Q 012190 168 CPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT------PFEGLVKFVEETVRREHA--SS 239 (468)
Q Consensus 168 ~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S------s~~~~~~dl~~~i~~~~~--~~ 239 (468)
+|...|.+ +++|+|||+||++++...|. .+..|.++|+|+++|+||||.| +++++++++.++++.... ..
T Consensus 6 ~y~~~g~~-~~~~~vv~~hG~~~~~~~~~-~~~~l~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (245)
T 3e0x_A 6 HYVHVGNK-KSPNTLLFVHGSGCNLKIFG-ELEKYLEDYNCILLDLKGHGESKGQCPSTVYGYIDNVANFITNSEVTKHQ 83 (245)
T ss_dssp CEEEEECT-TCSCEEEEECCTTCCGGGGT-TGGGGCTTSEEEEECCTTSTTCCSCCCSSHHHHHHHHHHHHHHCTTTTTC
T ss_pred EEEecCCC-CCCCEEEEEeCCcccHHHHH-HHHHHHhCCEEEEecCCCCCCCCCCCCcCHHHHHHHHHHHHHhhhhHhhc
Confidence 44444432 24789999999999999999 8899999999999999999988 588999999999922111 13
Q ss_pred CCCcEEEEEeChhHHHHHHHHHh-CCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHH
Q 012190 240 PEKPIYLVGDSFGGCLALAVAAR-NPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAM 318 (468)
Q Consensus 240 ~~~~i~LvGhS~GG~ia~~~a~~-~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (468)
. +++|+||||||.+|+.+|.+ +|+ ++++|+++|..............+........ +...
T Consensus 84 ~--~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~--------- 144 (245)
T 3e0x_A 84 K--NITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARFDKLDKDFMEKIYHNQLDNN-------YLLE--------- 144 (245)
T ss_dssp S--CEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBCTTSCHHHHHHHHTTCCCHH-------HHHH---------
T ss_pred C--ceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCccccccHHHHHHHHHHHHHhh-------cCcc---------
Confidence 3 89999999999999999999 999 99999999976542111100001111000000 0000
Q ss_pred HhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHH
Q 012190 319 VNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDE 398 (468)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~ 398 (468)
.. ..... .....+...+. ............. ........+.++++|+++++|++|.+++++ .
T Consensus 145 -~~-~~~~~-~~~~~~~~~~~------------~~~~~~~~~~~~~--~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~-~ 206 (245)
T 3e0x_A 145 -CI-GGIDN-PLSEKYFETLE------------KDPDIMINDLIAC--KLIDLVDNLKNIDIPVKAIVAKDELLTLVE-Y 206 (245)
T ss_dssp -HH-TCSCS-HHHHHHHTTSC------------SSHHHHHHHHHHH--HHCBCGGGGGGCCSCEEEEEETTCSSSCHH-H
T ss_pred -cc-cccch-HHHHHHHHHHh------------cCcHHHHHHHHHh--ccccHHHHHHhCCCCEEEEEeCCCCCCCHH-H
Confidence 00 00000 00111111100 0111111111111 111123556889999999999999999999 7
Q ss_pred HHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHh
Q 012190 399 AKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (468)
Q Consensus 399 ~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~ 435 (468)
.+.+.+.++++++++++++||+++.++|+++.+.|.+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~ 243 (245)
T 3e0x_A 207 SEIIKKEVENSELKIFETGKHFLLVVNAKGVAEEIKN 243 (245)
T ss_dssp HHHHHHHSSSEEEEEESSCGGGHHHHTHHHHHHHHHT
T ss_pred HHHHHHHcCCceEEEeCCCCcceEEecHHHHHHHHHh
Confidence 9999999999999999999999999999999999984
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.1e-26 Score=224.56 Aligned_cols=111 Identities=18% Similarity=0.221 Sum_probs=94.0
Q ss_pred CCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhc-CCeEEEEecCCCCCCCC-----------hHHHH
Q 012190 158 KPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVYDRTP-----------FEGLV 225 (468)
Q Consensus 158 ~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~-~~~~V~~~D~~G~G~Ss-----------~~~~~ 225 (468)
..+|.. ++|...|+ +|+|||+||++++...|..+++.|. .+|+|+++|+||||.|+ +++++
T Consensus 17 ~~~g~~---l~y~~~G~----g~~vvllHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a 89 (328)
T 2cjp_A 17 AVNGLN---MHLAELGE----GPTILFIHGFPELWYSWRHQMVYLAERGYRAVAPDLRGYGDTTGAPLNDPSKFSILHLV 89 (328)
T ss_dssp EETTEE---EEEEEECS----SSEEEEECCTTCCGGGGHHHHHHHHTTTCEEEEECCTTSTTCBCCCTTCGGGGSHHHHH
T ss_pred cCCCcE---EEEEEcCC----CCEEEEECCCCCchHHHHHHHHHHHHCCcEEEEECCCCCCCCCCcCcCCcccccHHHHH
Confidence 345544 46666664 6899999999999999999999995 57999999999999872 56789
Q ss_pred HHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 226 KFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 226 ~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
+|+.+++++++. ..++++|+||||||.+|+.+|.++|++|+++|+++++.
T Consensus 90 ~dl~~~l~~l~~--~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~ 139 (328)
T 2cjp_A 90 GDVVALLEAIAP--NEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVHF 139 (328)
T ss_dssp HHHHHHHHHHCT--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred HHHHHHHHHhcC--CCCCeEEEEECHHHHHHHHHHHhChhheeEEEEEccCC
Confidence 999999998641 14589999999999999999999999999999998754
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.94 E-value=9.2e-26 Score=218.51 Aligned_cols=234 Identities=13% Similarity=0.127 Sum_probs=154.0
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhc-CCeEEEEecCCCC-CCC-------ChHHHHHHHHHHHHHHhhcCCCCcEEEEE
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVY-DRT-------PFEGLVKFVEETVRREHASSPEKPIYLVG 248 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~-~~~~V~~~D~~G~-G~S-------s~~~~~~dl~~~i~~~~~~~~~~~i~LvG 248 (468)
++|+|||+||++++...|..+++.|. .+|+|+++|+||| |.| +++++++|+..+++.+. ..+..+++|+|
T Consensus 34 ~~~~VvllHG~g~~~~~~~~~~~~L~~~G~~Vi~~D~rGh~G~S~~~~~~~~~~~~~~D~~~~~~~l~-~~~~~~~~lvG 112 (305)
T 1tht_A 34 KNNTILIASGFARRMDHFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSIDEFTMTTGKNSLCTVYHWLQ-TKGTQNIGLIA 112 (305)
T ss_dssp CSCEEEEECTTCGGGGGGHHHHHHHHTTTCCEEEECCCBCC--------CCCHHHHHHHHHHHHHHHH-HTTCCCEEEEE
T ss_pred CCCEEEEecCCccCchHHHHHHHHHHHCCCEEEEeeCCCCCCCCCCcccceehHHHHHHHHHHHHHHH-hCCCCceEEEE
Confidence 46899999999999999999999995 5799999999999 987 36788899998888775 34567999999
Q ss_pred eChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChh
Q 012190 249 DSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPR 328 (468)
Q Consensus 249 hS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (468)
|||||.+|+.+|.+ | ++.++|++++.... ..... ..... .....+
T Consensus 113 hSmGG~iA~~~A~~-~-~v~~lvl~~~~~~~--------~~~~~-------~~~~~---~~~~~~--------------- 157 (305)
T 1tht_A 113 ASLSARVAYEVISD-L-ELSFLITAVGVVNL--------RDTLE-------KALGF---DYLSLP--------------- 157 (305)
T ss_dssp ETHHHHHHHHHTTT-S-CCSEEEEESCCSCH--------HHHHH-------HHHSS---CGGGSC---------------
T ss_pred ECHHHHHHHHHhCc-c-CcCEEEEecCchhH--------HHHHH-------HHhhh---hhhhcc---------------
Confidence 99999999999998 7 89999998764311 00000 00000 000000
Q ss_pred HHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHH---HhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHh
Q 012190 329 IKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKS---ASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNS 405 (468)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~ 405 (468)
...+...+.. .. .......+....... ........+.++++|+|+|+|++|.++|++ ..+.+.+.
T Consensus 158 --~~~~~~~~~~-------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~-~~~~l~~~ 225 (305)
T 1tht_A 158 --IDELPNDLDF-------EG--HKLGSEVFVRDCFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWVKQE-EVYDMLAH 225 (305)
T ss_dssp --GGGCCSEEEE-------TT--EEEEHHHHHHHHHHTTCSSHHHHHHHHTTCCSCEEEEEETTCTTSCHH-HHHHHHTT
T ss_pred --hhhCcccccc-------cc--cccCHHHHHHHHHhccccchhhHHHHHhhcCCCEEEEEeCCCCccCHH-HHHHHHHh
Confidence 0000000000 00 000000000000000 000113456889999999999999999999 79999997
Q ss_pred C--CCcEEEEeCCCCccccccCcHHHHHHHHhc-Ccc--cccCCCCCCCCCCCCCHHHHH
Q 012190 406 L--QNCIVRNFKDNGHTLLLEEGISLLTIIKGT-CKY--RRSRKLDSVADFLPPSRQEFK 460 (468)
Q Consensus 406 l--~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~-~F~--~r~~~~~~v~~~~~~~~~~~~ 460 (468)
+ +++++++++++||.++ |+|+.+.+.+... .+. -...-.+.+.+++.|+.+++-
T Consensus 226 i~~~~~~l~~i~~agH~~~-e~p~~~~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (305)
T 1tht_A 226 IRTGHCKLYSLLGSSHDLG-ENLVVLRNFYQSVTKAAIAMDGGSLEIDVDFIEPDFEQLT 284 (305)
T ss_dssp CTTCCEEEEEETTCCSCTT-SSHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCCHHHHH
T ss_pred cCCCCcEEEEeCCCCCchh-hCchHHHHHHHHHHHHHHHhCcccchhhhhhhccchHhhc
Confidence 7 4789999999999996 8998766655532 121 122344889999999988763
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.1e-26 Score=221.53 Aligned_cols=253 Identities=11% Similarity=0.063 Sum_probs=163.1
Q ss_pred CCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC-------ChHHHHHHHHH
Q 012190 158 KPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------PFEGLVKFVEE 230 (468)
Q Consensus 158 ~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-------s~~~~~~dl~~ 230 (468)
..+|.. ++|...|. +|+|||+||++++...|..+++.|.++|+|+++|+||||.| +++++++++.+
T Consensus 54 ~~~~~~---~~~~~~g~----~p~vv~lhG~~~~~~~~~~~~~~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~dl~~ 126 (314)
T 3kxp_A 54 DIGRIT---LNVREKGS----GPLMLFFHGITSNSAVFEPLMIRLSDRFTTIAVDQRGHGLSDKPETGYEANDYADDIAG 126 (314)
T ss_dssp ECSSCE---EEEEEECC----SSEEEEECCTTCCGGGGHHHHHTTTTTSEEEEECCTTSTTSCCCSSCCSHHHHHHHHHH
T ss_pred EECCEE---EEEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHcCCeEEEEeCCCcCCCCCCCCCCCHHHHHHHHHH
Confidence 334444 35555554 78999999999999999999999988899999999999998 58999999999
Q ss_pred HHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhc
Q 012190 231 TVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVM 310 (468)
Q Consensus 231 ~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (468)
+++++. .++++|+||||||.+++.+|.++|++++++|+++|...................+.... ........
T Consensus 127 ~l~~l~----~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-- 199 (314)
T 3kxp_A 127 LIRTLA----RGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDALEARVNAGSQLFE-DIKAVEAY-- 199 (314)
T ss_dssp HHHHHT----SSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHHHHHHHHHTTTTCSCBS-SHHHHHHH--
T ss_pred HHHHhC----CCCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCCCCcchhhHHHHHhhhchhhhc-CHHHHHHH--
Confidence 999864 35999999999999999999999999999999998653322111000000000000000 00000000
Q ss_pred CChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCC
Q 012190 311 GDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKD 390 (468)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D 390 (468)
....................+.. ...... ....... ...............+.++++|+|+|+|++|
T Consensus 200 -------~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D 266 (314)
T 3kxp_A 200 -------LAGRYPNIPADAIRIRAESGYQP----VDGGLR-PLASSAA-MAQTARGLRSDLVPAYRDVTKPVLIVRGESS 266 (314)
T ss_dssp -------HHHHSTTSCHHHHHHHHHHSEEE----ETTEEE-ESSCHHH-HHHHHHHTTSCCHHHHHHCCSCEEEEEETTC
T ss_pred -------HHhhcccCchHHHHHHhhhhhcc----cccccc-cccChhh-hhhhccccCcchhhHhhcCCCCEEEEecCCC
Confidence 00000111111101111111100 000000 0000000 0001111111223456789999999999999
Q ss_pred CCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 391 NMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 391 ~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
.+++++ ..+.+.+.++++++++++++||+++.|+|+++.+.|. +|++
T Consensus 267 ~~~~~~-~~~~~~~~~~~~~~~~~~g~gH~~~~e~~~~~~~~i~--~fl~ 313 (314)
T 3kxp_A 267 KLVSAA-ALAKTSRLRPDLPVVVVPGADHYVNEVSPEITLKAIT--NFID 313 (314)
T ss_dssp SSSCHH-HHHHHHHHCTTSCEEEETTCCSCHHHHCHHHHHHHHH--HHHH
T ss_pred ccCCHH-HHHHHHHhCCCceEEEcCCCCCcchhhCHHHHHHHHH--HHHh
Confidence 999999 7999999999999999999999999999999999999 5554
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2.2e-26 Score=224.16 Aligned_cols=262 Identities=11% Similarity=0.036 Sum_probs=157.6
Q ss_pred ccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC--------ChHHHHHH
Q 012190 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT--------PFEGLVKF 227 (468)
Q Consensus 156 ~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S--------s~~~~~~d 227 (468)
++..+|.. ++|...|+. .+|+|||+||++++...|..+++.|++.|+|+++|+||||.| ++++++++
T Consensus 25 ~~~~~g~~---l~y~~~G~g--~~~~vvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~GhG~S~~~~~~~~~~~~~a~d 99 (318)
T 2psd_A 25 QMNVLDSF---INYYDSEKH--AENAVIFLHGNATSSYLWRHVVPHIEPVARCIIPDLIGMGKSGKSGNGSYRLLDHYKY 99 (318)
T ss_dssp EEEETTEE---EEEEECCSC--TTSEEEEECCTTCCGGGGTTTGGGTTTTSEEEEECCTTSTTCCCCTTSCCSHHHHHHH
T ss_pred EEeeCCeE---EEEEEcCCC--CCCeEEEECCCCCcHHHHHHHHHHhhhcCeEEEEeCCCCCCCCCCCCCccCHHHHHHH
Confidence 34445544 466666651 346899999999999999999999988899999999999988 36788999
Q ss_pred HHHHHHHHhhcCCC-CcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCC--CCCcCcchHHHhhCchhHHhhHHH
Q 012190 228 VEETVRREHASSPE-KPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFG--RSQLQPLFPILKAMPDELHCAVPY 304 (468)
Q Consensus 228 l~~~i~~~~~~~~~-~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 304 (468)
+.++++.+ +. ++++|+||||||.+|+.+|.++|++|+++|++++..... ...+.........+..... ..
T Consensus 100 l~~ll~~l----~~~~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 172 (318)
T 2psd_A 100 LTAWFELL----NLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDEWPDIEEDIALIKSEEG---EK 172 (318)
T ss_dssp HHHHHTTS----CCCSSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEEECCSCBSCCTTSCSCHHHHHHHHSTHH---HH
T ss_pred HHHHHHhc----CCCCCeEEEEEChhHHHHHHHHHhChHhhheEEEeccccCCccchhhhhhHHHHHHHHhcccc---hh
Confidence 99998874 33 689999999999999999999999999999988643211 1111111011110000000 00
Q ss_pred HhhhhcCChhhH-HH-HhhccCCChhHHhhhhhhhcchh---cchhhhhhccCCcch--hHHHHHHHHHHhHHHhhhccc
Q 012190 305 LLSYVMGDPIKM-AM-VNIENRLPPRIKLEQLSNNLPAL---LPRLSVMSDIIPKDT--LLWKLKLLKSASAYANSRLHA 377 (468)
Q Consensus 305 ~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~--l~~~~~~~~~~~~~~~~~l~~ 377 (468)
.. .....+.. .. .........+. .+.+...+... ............... ........ ......+..
T Consensus 173 ~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~ 245 (318)
T 2psd_A 173 MV--LENNFFVETVLPSKIMRKLEPEE-FAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDVVQIV----RNYNAYLRA 245 (318)
T ss_dssp HH--TTTCHHHHTHHHHTCSSCCCHHH-HHHHHGGGCSSSGGGHHHHHHHHTCCBTTTSCHHHHHHH----HHHHHHHHT
T ss_pred hh--hcchHHHHhhccccccccCCHHH-HHHHHHhhcCccccccchhcccccccccccccchhHHHH----HHHHHHhcc
Confidence 00 00000000 00 00001111111 11111111000 000000000000000 00000001 111234567
Q ss_pred C-CceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCccccc
Q 012190 378 V-KAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRS 442 (468)
Q Consensus 378 i-~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r~ 442 (468)
+ ++|+|+|+|++| ++++ ..+.+.+.+++++++++ ++||++++|+|+++++.|. +|+.+.
T Consensus 246 i~~~P~Lvi~G~~D-~~~~--~~~~~~~~~~~~~~~~i-~~gH~~~~e~p~~~~~~i~--~fl~~~ 305 (318)
T 2psd_A 246 SDDLPKLFIESDPG-FFSN--AIVEGAKKFPNTEFVKV-KGLHFLQEDAPDEMGKYIK--SFVERV 305 (318)
T ss_dssp CTTSCEEEEEEEEC-SSHH--HHHHHHTTSSSEEEEEE-EESSSGGGTCHHHHHHHHH--HHHHHH
T ss_pred ccCCCeEEEEeccc-cCcH--HHHHHHHhCCCcEEEEe-cCCCCCHhhCHHHHHHHHH--HHHHHh
Confidence 7 999999999999 8776 48889999999999999 6899999999999999999 666543
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-26 Score=226.84 Aligned_cols=239 Identities=14% Similarity=0.150 Sum_probs=156.0
Q ss_pred eeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCC--------hHHHHHHHHHHHHHHhhc
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP--------FEGLVKFVEETVRREHAS 238 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss--------~~~~~~dl~~~i~~~~~~ 238 (468)
++|...|. ++|+|||+||++++...|..+++.| +|+|+++|+||||.|+ ++++++++.++++++
T Consensus 72 ~~~~~~g~---~~~~vv~~hG~~~~~~~~~~~~~~l--g~~Vi~~D~~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l--- 143 (330)
T 3p2m_A 72 ISALRWGG---SAPRVIFLHGGGQNAHTWDTVIVGL--GEPALAVDLPGHGHSAWREDGNYSPQLNSETLAPVLREL--- 143 (330)
T ss_dssp EEEEEESS---SCCSEEEECCTTCCGGGGHHHHHHS--CCCEEEECCTTSTTSCCCSSCBCCHHHHHHHHHHHHHHS---
T ss_pred EEEEEeCC---CCCeEEEECCCCCccchHHHHHHHc--CCeEEEEcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---
Confidence 35555554 3788999999999999999999998 8999999999999884 789999999999984
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCC------cCcchHHHhh--CchhHHhhHHHHhhhhc
Q 012190 239 SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQ------LQPLFPILKA--MPDELHCAVPYLLSYVM 310 (468)
Q Consensus 239 ~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~------~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 310 (468)
..++++|+||||||.+|+.+|.++|++|+++|+++|........ .......... ..............
T Consensus 144 -~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 219 (330)
T 3p2m_A 144 -APGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTAEQRGTVALMHGEREFPSFQAMLDLTIA--- 219 (330)
T ss_dssp -STTCCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCHHHHHHHHHHTCC-----------CCBSCHHHHHHHHHH---
T ss_pred -CCCCcEEEEECHhHHHHHHHHHhChhhcceEEEEcCCCccchhhhhhhhhhhhhhhhhcCCccccCHHHHHHHHHh---
Confidence 45589999999999999999999999999999999854211000 0000000000 00000000000000
Q ss_pred CChhhHHHHhhccCCChhHHhhhhhhhcchhcch-hhhhhccCC-cchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeC
Q 012190 311 GDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPR-LSVMSDIIP-KDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASG 388 (468)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~ 388 (468)
.............+.......... .......+. .... ......+.++++|+|+|+|+
T Consensus 220 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~i~~PvLii~G~ 278 (330)
T 3p2m_A 220 ----------AAPHRDVKSLRRGVFHNSRRLDNGNWVWRYDAIRTFGDF-----------AGLWDDVDALSAPITLVRGG 278 (330)
T ss_dssp ----------HCTTSCHHHHHHHHHTTEEECSSSCEEESSCCCSBCCCH-----------HHHHHHHHHCCSCEEEEEET
T ss_pred ----------cCCCCCHHHHHHHHHhcccccCCCceEEeechhhCcccc-----------HHHHHHHhhCCCCEEEEEeC
Confidence 000111111111111111000000 000000000 0000 00123457889999999999
Q ss_pred CCCCCCcHHHHHHHHHhCCCcE-EEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 389 KDNMLPSEDEAKRLNNSLQNCI-VRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 389 ~D~~v~~~~~~~~l~~~l~~~~-~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
+|.+++++ ..+.+.+.+++++ +++++++||++++|+|+++++.|. +|+++
T Consensus 279 ~D~~v~~~-~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~~ 329 (330)
T 3p2m_A 279 SSGFVTDQ-DTAELHRRATHFRGVHIVEKSGHSVQSDQPRALIEIVR--GVLDT 329 (330)
T ss_dssp TCCSSCHH-HHHHHHHHCSSEEEEEEETTCCSCHHHHCHHHHHHHHH--HHTTC
T ss_pred CCCCCCHH-HHHHHHHhCCCCeeEEEeCCCCCCcchhCHHHHHHHHH--HHHhc
Confidence 99999999 7999999999999 999999999999999999999999 56543
|
| >4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A | Back alignment and structure |
|---|
Probab=99.94 E-value=5.4e-27 Score=221.41 Aligned_cols=241 Identities=13% Similarity=0.151 Sum_probs=157.2
Q ss_pred eeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhh-hcCCeEEEEecCCCCCCCC----------hHHHHHHHHHHHHHH
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKP-LGKAFEVRCLHIPVYDRTP----------FEGLVKFVEETVRRE 235 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~-L~~~~~V~~~D~~G~G~Ss----------~~~~~~dl~~~i~~~ 235 (468)
++|...+. ++|+|||+||++++...|..+++. +.++|+|+++|+||||.|+ ++++++++.++++.+
T Consensus 15 ~~~~~~~~---~~~~vv~lHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (279)
T 4g9e_A 15 IAVRESEG---EGAPLLMIHGNSSSGAIFAPQLEGEIGKKWRVIAPDLPGHGKSTDAIDPDRSYSMEGYADAMTEVMQQL 91 (279)
T ss_dssp EEEEECCC---CEEEEEEECCTTCCGGGGHHHHHSHHHHHEEEEEECCTTSTTSCCCSCHHHHSSHHHHHHHHHHHHHHH
T ss_pred EEEEecCC---CCCeEEEECCCCCchhHHHHHHhHHHhcCCeEEeecCCCCCCCCCCCCcccCCCHHHHHHHHHHHHHHh
Confidence 35555543 478999999999999999999999 5889999999999999883 688899999999985
Q ss_pred hhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCc---CcchHH-HhhCchhHHhhHHHHhhhhcC
Q 012190 236 HASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQL---QPLFPI-LKAMPDELHCAVPYLLSYVMG 311 (468)
Q Consensus 236 ~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 311 (468)
. .++++|+||||||.+|+.+|.++|+ +.++|+++++........ ...... .....................
T Consensus 92 ~----~~~~~lvG~S~Gg~~a~~~a~~~p~-~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (279)
T 4g9e_A 92 G----IADAVVFGWSLGGHIGIEMIARYPE-MRGLMITGTPPVAREEVGQGFKSGPDMALAGQEIFSERDVESYARSTCG 166 (279)
T ss_dssp T----CCCCEEEEETHHHHHHHHHTTTCTT-CCEEEEESCCCCCGGGHHHHBCCSTTGGGGGCSCCCHHHHHHHHHHHHC
T ss_pred C----CCceEEEEECchHHHHHHHHhhCCc-ceeEEEecCCCCCCCccchhhccchhhhhcCcccccHHHHHHHHHhhcc
Confidence 3 4589999999999999999999999 888888887653321110 000000 000000000000011111100
Q ss_pred ChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHH-hHHHhhhcccCCceEEEEEeCCC
Q 012190 312 DPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSA-SAYANSRLHAVKAEVLVLASGKD 390 (468)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~l~~i~~PvLlI~G~~D 390 (468)
.. .. ....+.+.. ............+... .......+..+++|+|+|+|++|
T Consensus 167 ~~-----------~~-~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D 219 (279)
T 4g9e_A 167 EP-----------FE-ASLLDIVAR---------------TDGRARRIMFEKFGSGTGGNQRDIVAEAQLPIAVVNGRDE 219 (279)
T ss_dssp SS-----------CC-HHHHHHHHH---------------SCHHHHHHHHHHHHHTCBCCHHHHHHHCCSCEEEEEETTC
T ss_pred Cc-----------cc-HHHHHHHHh---------------hhccchHHHHHHhhccCCchHHHHHHhcCCCEEEEEcCCC
Confidence 00 00 000000000 0000000001111100 01112345788999999999999
Q ss_pred CCCCcHHHHHHHH-HhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccccCCC
Q 012190 391 NMLPSEDEAKRLN-NSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSRKL 445 (468)
Q Consensus 391 ~~v~~~~~~~~l~-~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r~~~~ 445 (468)
.+++++ ..+.+. +.++++++++++++||++++|+|+++++.|. +|+++....
T Consensus 220 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~--~fl~~~~~~ 272 (279)
T 4g9e_A 220 PFVELD-FVSKVKFGNLWEGKTHVIDNAGHAPFREAPAEFDAYLA--RFIRDCTQL 272 (279)
T ss_dssp SSBCHH-HHTTCCCSSBGGGSCEEETTCCSCHHHHSHHHHHHHHH--HHHHHHHSS
T ss_pred cccchH-HHHHHhhccCCCCeEEEECCCCcchHHhCHHHHHHHHH--HHHHHhhhh
Confidence 999999 688877 7778999999999999999999999999999 677765544
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A | Back alignment and structure |
|---|
Probab=99.94 E-value=6e-26 Score=217.28 Aligned_cols=244 Identities=17% Similarity=0.198 Sum_probs=147.9
Q ss_pred eeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCCC--------hHHHHHHHHHHHHHH-h
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTP--------FEGLVKFVEETVRRE-H 236 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss--------~~~~~~dl~~~i~~~-~ 236 (468)
++|...|.. +++++|||+||++++...|...+..+ .++|+|+++|+||||.|+ ++++++|+.++++++ .
T Consensus 17 l~~~~~g~~-~~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~dl~~~~~~l~~ 95 (293)
T 1mtz_A 17 IYYKLCKAP-EEKAKLMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRSEEPDQSKFTIDYGVEEAEALRSKLFG 95 (293)
T ss_dssp EEEEEECCS-SCSEEEEEECCTTTCCSGGGGGGGGGGGGTEEEEEECCTTSTTSCCCCGGGCSHHHHHHHHHHHHHHHHT
T ss_pred EEEEEECCC-CCCCeEEEEeCCCCcchhHHHHHHHHHhcCcEEEEecCCCCccCCCCCCCcccHHHHHHHHHHHHHHhcC
Confidence 455555541 12378999999866655554444444 567999999999999883 578899999999986 4
Q ss_pred hcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCc-chHHHhhCchhHHhhHHHHhhh-hcCChh
Q 012190 237 ASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQP-LFPILKAMPDELHCAVPYLLSY-VMGDPI 314 (468)
Q Consensus 237 ~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 314 (468)
. ++++|+||||||.+|+.+|.++|++|+++|+++|...... +.. .......++......+...... ....+.
T Consensus 96 ~----~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (293)
T 1mtz_A 96 N----EKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPL--TVKEMNRLIDELPAKYRDAIKKYGSSGSYENPE 169 (293)
T ss_dssp T----CCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHH--HHHHHHHHHHTSCHHHHHHHHHHHHHTCTTCHH
T ss_pred C----CcEEEEEecHHHHHHHHHHHhCchhhheEEecCCccChHH--HHHHHHHHHHhcCHHHHHHHHHhhccCCcChHH
Confidence 3 4899999999999999999999999999999998653210 000 0000111111100000000000 000000
Q ss_pred hHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHH------HHH-------------HhHHHhhhc
Q 012190 315 KMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKL------LKS-------------ASAYANSRL 375 (468)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~-------------~~~~~~~~l 375 (468)
... ....+...... . ....+ +.+...... +.. ........+
T Consensus 170 ~~~------------~~~~~~~~~~~------~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 229 (293)
T 1mtz_A 170 YQE------------AVNYFYHQHLL------R-SEDWP-PEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKI 229 (293)
T ss_dssp HHH------------HHHHHHHHHTS------C-SSCCC-HHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTTTCBCTTTG
T ss_pred HHH------------HHHHHHHhhcc------c-ccCch-HHHHHhHhhhccchhhhhccCcceecccccccCCChhhhh
Confidence 000 00000000000 0 00000 000000000 000 000012456
Q ss_pred ccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 376 HAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 376 ~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
.++++|+|+|+|++| .+++. ..+.+.+.++++++++++++||++++|+|+++++.|. +|+.+
T Consensus 230 ~~i~~P~lii~G~~D-~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~--~fl~~ 291 (293)
T 1mtz_A 230 SAIKIPTLITVGEYD-EVTPN-VARVIHEKIAGSELHVFRDCSHLTMWEDREGYNKLLS--DFILK 291 (293)
T ss_dssp GGCCSCEEEEEETTC-SSCHH-HHHHHHHHSTTCEEEEETTCCSCHHHHSHHHHHHHHH--HHHHT
T ss_pred ccCCCCEEEEeeCCC-CCCHH-HHHHHHHhCCCceEEEeCCCCCCccccCHHHHHHHHH--HHHHh
Confidence 788999999999999 67777 6899999999999999999999999999999999999 56543
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P | Back alignment and structure |
|---|
Probab=99.94 E-value=3.2e-26 Score=222.58 Aligned_cols=272 Identities=15% Similarity=0.138 Sum_probs=155.1
Q ss_pred hHHHHHHhccCccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcC--CeEEEEecCCCCCCC---
Q 012190 145 SVKDYLDAAKEIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGK--AFEVRCLHIPVYDRT--- 219 (468)
Q Consensus 145 ~~~~y~~~~~~~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~--~~~V~~~D~~G~G~S--- 219 (468)
.|..++.+...+...++.-...++|...|. ++|+|||+||++++...|..+++.|++ +|+|+++|+||||.|
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---~~p~lvllHG~~~~~~~w~~~~~~L~~~~~~~via~Dl~GhG~S~~~ 83 (316)
T 3c5v_A 7 PWSQYFESMEDVEVENETGKDTFRVYKSGS---EGPVLLLLHGGGHSALSWAVFTAAIISRVQCRIVALDLRSHGETKVK 83 (316)
T ss_dssp CGGGTCSEEEEEEEEETTEEEEEEEEEECS---SSCEEEEECCTTCCGGGGHHHHHHHHTTBCCEEEEECCTTSTTCBCS
T ss_pred ccccccCccceEEecCCcceEEEEEEecCC---CCcEEEEECCCCcccccHHHHHHHHhhcCCeEEEEecCCCCCCCCCC
Confidence 344455554444433321001245555553 478999999999999999999999987 899999999999987
Q ss_pred -----ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHh--CCCCceEEEEeCCCCCCCCCCcCcchHHHh
Q 012190 220 -----PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR--NPTIDLILILSNPATSFGRSQLQPLFPILK 292 (468)
Q Consensus 220 -----s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~--~P~~v~~lVli~p~~~~~~~~~~~~~~~~~ 292 (468)
+++++++|+.++++++.... .++++|+||||||.+|+.+|.+ +|+ ++++|++++.................
T Consensus 84 ~~~~~~~~~~a~dl~~~l~~l~~~~-~~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~ 161 (316)
T 3c5v_A 84 NPEDLSAETMAKDVGNVVEAMYGDL-PPPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDVVEGTAMDALNSMQNFLR 161 (316)
T ss_dssp CTTCCCHHHHHHHHHHHHHHHHTTC-CCCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESCCHHHHHHHHHHHHHHHH
T ss_pred CccccCHHHHHHHHHHHHHHHhccC-CCCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEcccccchhhhHHHHHHHHh
Confidence 47899999999999974221 1589999999999999999996 576 99999998742110000000000000
Q ss_pred hCchh---HHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcc--------hhhhhhccCCcchhHHHH
Q 012190 293 AMPDE---LHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLP--------RLSVMSDIIPKDTLLWKL 361 (468)
Q Consensus 293 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~~~~ 361 (468)
..+.. ............... ........+...+..... ................
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 226 (316)
T 3c5v_A 162 GRPKTFKSLENAIEWSVKSGQIR-------------NLESARVSMVGQVKQCEGITSPEGSKKDHPYTWRIELAKTEK-- 226 (316)
T ss_dssp HSCSCBSSHHHHHHHHHHTTSCC-------------CHHHHHHHHHHHEEECC------------CEEESCCGGGGHH--
T ss_pred hCccccccHHHHHHHhhhccccc-------------chhhhhhhhhHHhhhccccccccccccccceeeeecccchhh--
Confidence 00000 000000000000000 000000000000000000 0000000000000000
Q ss_pred HHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 362 KLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 362 ~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
............+..+++|+|+|+|++|.+.+.. ......+++++++++++||++++|+|+++++.|. +|+.+
T Consensus 227 -~~~~~~~~~~~~~~~i~~P~Lli~g~~D~~~~~~----~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~~ 299 (316)
T 3c5v_A 227 -YWDGWFRGLSNLFLSCPIPKLLLLAGVDRLDKDL----TIGQMQGKFQMQVLPQCGHAVHEDAPDKVAEAVA--TFLIR 299 (316)
T ss_dssp -HHHHHHTTHHHHHHHSSSCEEEEESSCCCCCHHH----HHHHHTTCSEEEECCCCSSCHHHHSHHHHHHHHH--HHHHH
T ss_pred -hhhhhhhhhHHHhhcCCCCEEEEEecccccccHH----HHHhhCCceeEEEcCCCCCcccccCHHHHHHHHH--HHHHh
Confidence 0000000012344578999999999999875433 2333457889999999999999999999999999 67765
Q ss_pred cC
Q 012190 442 SR 443 (468)
Q Consensus 442 ~~ 443 (468)
.+
T Consensus 300 ~~ 301 (316)
T 3c5v_A 300 HR 301 (316)
T ss_dssp TT
T ss_pred cc
Confidence 44
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.93 E-value=6.1e-26 Score=224.38 Aligned_cols=273 Identities=14% Similarity=0.080 Sum_probs=161.7
Q ss_pred ccCCCCCCc-eeeeecCCCCCC-CCCCeEEEeCCCCCchhh-------------HHHhH---hhh-cCCeEEEEecCCCC
Q 012190 156 IIKPDGGPP-RWFCPVDCGRPL-KGSPTLLFLPGIDGLGLG-------------LILHH---KPL-GKAFEVRCLHIPVY 216 (468)
Q Consensus 156 ~~~~dg~~~-~~~~y~~~g~~~-~~~p~lV~lHG~~~s~~~-------------~~~~~---~~L-~~~~~V~~~D~~G~ 216 (468)
+...+|... .-++|...|.+. .++|+|||+||++++... |..++ +.| .++|+|+++|+|||
T Consensus 17 ~~~~~g~~l~~~i~y~~~g~~~~~~~p~vll~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~ 96 (377)
T 3i1i_A 17 YTFENGRTIPVQMGYETYGTLNRERSNVILICHYFSATSHAAGKYTAHDEESGWWDGLIGPGKAIDTNQYFVICTDNLCN 96 (377)
T ss_dssp EECTTSCEEEEEEEEEEESCCCTTCCCEEEEECCTTCCSCCSSCSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTC
T ss_pred eeecCCCEeeeeEEEEeecccCCCCCCEEEEeccccCcchhccccccccccccchhhhcCCCCccccccEEEEEeccccc
Confidence 444555432 224666666542 246899999999999776 77777 566 67899999999999
Q ss_pred CCC----------------------------ChHHHHHHHHHHHHHHhhcCCCCcEE-EEEeChhHHHHHHHHHhCCCCc
Q 012190 217 DRT----------------------------PFEGLVKFVEETVRREHASSPEKPIY-LVGDSFGGCLALAVAARNPTID 267 (468)
Q Consensus 217 G~S----------------------------s~~~~~~dl~~~i~~~~~~~~~~~i~-LvGhS~GG~ia~~~a~~~P~~v 267 (468)
|.| +++++++++.++++++ +.++++ |+||||||.+|+.+|+++|++|
T Consensus 97 G~S~G~~~g~~g~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~l~~l----~~~~~~ilvGhS~Gg~ia~~~a~~~p~~v 172 (377)
T 3i1i_A 97 VQVKNPHVITTGPKSINPKTGDEYAMDFPVFTFLDVARMQCELIKDM----GIARLHAVMGPSAGGMIAQQWAVHYPHMV 172 (377)
T ss_dssp SCTTSTTCCCCSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHT----TCCCBSEEEEETHHHHHHHHHHHHCTTTB
T ss_pred ccccCCCcccCCCCCCCCCCCCcccCCCCCCCHHHHHHHHHHHHHHc----CCCcEeeEEeeCHhHHHHHHHHHHChHHH
Confidence 651 4589999999999884 444775 9999999999999999999999
Q ss_pred eEEEE-eCCCCCCCCCCcCcc---hHHHhhCchhHH-----------hhHHHHhhhh-cCChhhHHHHhhccCCChh---
Q 012190 268 LILIL-SNPATSFGRSQLQPL---FPILKAMPDELH-----------CAVPYLLSYV-MGDPIKMAMVNIENRLPPR--- 328 (468)
Q Consensus 268 ~~lVl-i~p~~~~~~~~~~~~---~~~~~~~~~~~~-----------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--- 328 (468)
+++|+ +++............ ...+...+.+.. .......... ...+..+ ...........
T Consensus 173 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 251 (377)
T 3i1i_A 173 ERMIGVITNPQNPIITSVNVAQNAIEAIRLDPSWKGGKYGEEQPMKGLQLANRMMFMNAFDEHFY-ETTYPRNSIEVEPY 251 (377)
T ss_dssp SEEEEESCCSBCCHHHHHHTTHHHHHHHHHSGGGGGGCCTTSCCHHHHHHHHHHHHTTSSCHHHH-HHHSCCCSSCCGGG
T ss_pred HHhcccCcCCCcCCchhhHHHHHHHHHHhcCCCccCCccccCCccchHHHHHHHHhhhcCCHHHH-HHHhhhhhcccccc
Confidence 99999 666442110000000 000000000000 0000000000 0000000 00000000000
Q ss_pred ------HHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHh-----HHHhhhcccCCceEEEEEeCCCCCCCcHH
Q 012190 329 ------IKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSAS-----AYANSRLHAVKAEVLVLASGKDNMLPSED 397 (468)
Q Consensus 329 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~l~~i~~PvLlI~G~~D~~v~~~~ 397 (468)
...+.+..... ...........+......+...+ ......+.++++|+|+|+|++|.+++++
T Consensus 252 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~- 324 (377)
T 3i1i_A 252 EKVSSLTSFEKEINKLT------YRSIELVDANSWMYTAKAVLLHDIAHGFSSLEEALSNVEANVLMIPCKQDLLQPSR- 324 (377)
T ss_dssp TCTTCCCHHHHHHHHHH------HHTTTTCCHHHHHHHHHHHHHCBTTTTSSCHHHHHHTCCSEEEEECBTTCSSSCTH-
T ss_pred ccccchhHHHHHHHHHH------hhhhcccCHHHHHHHHHHHhhcccccccCCHHHHHhhCCCCEEEEecCCccccCHH-
Confidence 00000000000 00001111112222222221111 0113456789999999999999999999
Q ss_pred HHHHHHHhC----CCcEEEEeCC-CCccccccCcHHHHHHHHhcCccccc
Q 012190 398 EAKRLNNSL----QNCIVRNFKD-NGHTLLLEEGISLLTIIKGTCKYRRS 442 (468)
Q Consensus 398 ~~~~l~~~l----~~~~~~~i~~-aGH~~~~e~p~~~~~~I~~~~F~~r~ 442 (468)
..+.+.+.+ ++++++++++ +||++++|+|+++++.|. +|+++.
T Consensus 325 ~~~~~~~~~~~~g~~~~~~~i~~~~gH~~~~e~p~~~~~~i~--~fl~~~ 372 (377)
T 3i1i_A 325 YNYKMVDLLQKQGKYAEVYEIESINGHMAGVFDIHLFEKKVY--EFLNRK 372 (377)
T ss_dssp HHHHHHHHHHHTTCCEEECCBCCTTGGGHHHHCGGGTHHHHH--HHHHSC
T ss_pred HHHHHHHHHHhcCCCceEEEcCCCCCCcchhcCHHHHHHHHH--HHHHhh
Confidence 799999999 9999999998 999999999999999999 677654
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=9.1e-26 Score=212.90 Aligned_cols=230 Identities=13% Similarity=0.106 Sum_probs=161.6
Q ss_pred cCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCc--hhhHHHhHhhh-cCCeEEEEecCCCCCCC-------ChHHHHH
Q 012190 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGL--GLGLILHHKPL-GKAFEVRCLHIPVYDRT-------PFEGLVK 226 (468)
Q Consensus 157 ~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s--~~~~~~~~~~L-~~~~~V~~~D~~G~G~S-------s~~~~~~ 226 (468)
+..+|.......+.+.+. +.|+|||+||++++ ...|..+++.| ..+|.|+++|+||||.| +++++++
T Consensus 27 ~~~~g~~l~~~~~~p~~~---~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 103 (270)
T 3pfb_A 27 LERDGLQLVGTREEPFGE---IYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSDGKFENMTVLNEIE 103 (270)
T ss_dssp EEETTEEEEEEEEECSSS---SEEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTSSSCGGGCCHHHHHH
T ss_pred eccCCEEEEEEEEcCCCC---CCCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEccccccCCCCCCCccCHHHHHH
Confidence 345666544333333332 47899999999988 56788999999 56799999999999988 3788999
Q ss_pred HHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHh
Q 012190 227 FVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLL 306 (468)
Q Consensus 227 dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (468)
|+.++++.+....+.++++|+||||||.+|+.+|.++|++++++|+++|....... ... ...
T Consensus 104 d~~~~i~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~-------~~~-----------~~~ 165 (270)
T 3pfb_A 104 DANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKGD-------ALE-----------GNT 165 (270)
T ss_dssp HHHHHHHHHHTCTTEEEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCTHHHHH-------HHH-----------TEE
T ss_pred hHHHHHHHHHhCcCCCeEEEEEeCchhHHHHHHHHhCchhhcEEEEeccccccchh-------hhh-----------hhh
Confidence 99999999876555669999999999999999999999999999999986522110 000 000
Q ss_pred hhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEE
Q 012190 307 SYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLA 386 (468)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~ 386 (468)
......+ ..+...+ .................. .....+..+++|+|+++
T Consensus 166 ~~~~~~~------------------~~~~~~~-----------~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~l~i~ 214 (270)
T 3pfb_A 166 QGVTYNP------------------DHIPDRL-----------PFKDLTLGGFYLRIAQQL--PIYEVSAQFTKPVCLIH 214 (270)
T ss_dssp TTEECCT------------------TSCCSEE-----------EETTEEEEHHHHHHHHHC--CHHHHHTTCCSCEEEEE
T ss_pred hccccCc------------------ccccccc-----------cccccccchhHhhccccc--CHHHHHhhCCccEEEEE
Confidence 0000000 0000000 000000001111111111 11245678899999999
Q ss_pred eCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 387 SGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 387 G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
|++|.+++++ ..+.+.+.++++++++++++||+++.++++++.+.|. +|+++
T Consensus 215 g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~--~fl~~ 266 (270)
T 3pfb_A 215 GTDDTVVSPN-ASKKYDQIYQNSTLHLIEGADHCFSDSYQKNAVNLTT--DFLQN 266 (270)
T ss_dssp ETTCSSSCTH-HHHHHHHHCSSEEEEEETTCCTTCCTHHHHHHHHHHH--HHHC-
T ss_pred cCCCCCCCHH-HHHHHHHhCCCCeEEEcCCCCcccCccchHHHHHHHH--HHHhh
Confidence 9999999999 7999999999999999999999999999999999999 56654
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.1e-25 Score=213.22 Aligned_cols=247 Identities=15% Similarity=0.105 Sum_probs=151.6
Q ss_pred CCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCC------------hHHHH
Q 012190 158 KPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP------------FEGLV 225 (468)
Q Consensus 158 ~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss------------~~~~~ 225 (468)
..+|.. ++|...|+ +|+|||+||++++...|..+++.|+++|+|+++|+||||.|+ .+.++
T Consensus 11 ~~~~~~---~~~~~~g~----g~~~vllHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~s~~~~~~~~~~~~~~~~~~ 83 (291)
T 3qyj_A 11 DTTEAR---INLVKAGH----GAPLLLLHGYPQTHVMWHKIAPLLANNFTVVATDLRGYGDSSRPASVPHHINYSKRVMA 83 (291)
T ss_dssp ECSSCE---EEEEEECC----SSEEEEECCTTCCGGGGTTTHHHHTTTSEEEEECCTTSTTSCCCCCCGGGGGGSHHHHH
T ss_pred ecCCeE---EEEEEcCC----CCeEEEECCCCCCHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccccccCHHHHH
Confidence 344554 56777775 789999999999999999999999999999999999999883 56778
Q ss_pred HHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHH-hhHHH
Q 012190 226 KFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELH-CAVPY 304 (468)
Q Consensus 226 ~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 304 (468)
+++.++++.+ ..++++|+||||||.+|+.+|.++|++++++|++++..... .......... ..+..
T Consensus 84 ~~~~~~~~~l----~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~p~~~---------~~~~~~~~~~~~~~~~ 150 (291)
T 3qyj_A 84 QDQVEVMSKL----GYEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDIAPTHK---------MYRTTDQEFATAYYHW 150 (291)
T ss_dssp HHHHHHHHHT----TCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCHHH---------HHHTCCHHHHHHTTHH
T ss_pred HHHHHHHHHc----CCCCEEEEEEChHHHHHHHHHHhCchhccEEEEECCCCcch---------hhhcchhhhhHHHHHH
Confidence 8888888874 45589999999999999999999999999999998643110 0000000000 00000
Q ss_pred Hh--------hh-hcCChhhHHHH---hh---ccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHH---
Q 012190 305 LL--------SY-VMGDPIKMAMV---NI---ENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKS--- 366 (468)
Q Consensus 305 ~~--------~~-~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--- 366 (468)
.+ .. ...++..+... .. ....+++. ...+.+.+. ...........+..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-------------~~~~~~~~~~~~~~~~~ 216 (291)
T 3qyj_A 151 FFLIQPDNLPETLIGANPEYYLRKCLEKWGKDFSAFHPQA-LAEYIRCFS-------------QPAVIHATCEDYRAAAT 216 (291)
T ss_dssp HHTTCSTTHHHHHHHTCHHHHHHHHHHHHCSCGGGSCHHH-HHHHHHHHT-------------SHHHHHHHHHHHHHHTT
T ss_pred HHhccCCCchHHHHcCCHHHHHHHHHHhcCCCcccCCHHH-HHHHHHHhc-------------CCCcchhHHHHHHcccc
Confidence 00 00 00000000000 00 00001000 011110000 00000000111111
Q ss_pred --HhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 367 --ASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 367 --~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
........+.++++|+|+|+|++|.+.+.......+.+..++.+..+++ +||++++|+|+++++.|. +|+++
T Consensus 217 ~~~~~~~~~~~~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~-~GH~~~~E~P~~v~~~i~--~fL~~ 290 (291)
T 3qyj_A 217 IDLEHDELDMKQKISCPVLVLWGEKGIIGRKYDVLATWRERAIDVSGQSLP-CGHFLPEEAPEETYQAIY--NFLTH 290 (291)
T ss_dssp HHHHHHHTTTTCCBCSCEEEEEETTSSHHHHSCHHHHHHTTBSSEEEEEES-SSSCHHHHSHHHHHHHHH--HHHHC
T ss_pred cchhhcchhcCCccccceEEEecccccccchhhHHHHHHhhcCCcceeecc-CCCCchhhCHHHHHHHHH--HHHhc
Confidence 0111123467899999999999997643211245556667788888886 899999999999999999 56543
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.6e-25 Score=219.83 Aligned_cols=113 Identities=17% Similarity=0.172 Sum_probs=95.3
Q ss_pred CCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhc-CCeEEEEecCCCCCCC---------ChHHHHHH
Q 012190 158 KPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVYDRT---------PFEGLVKF 227 (468)
Q Consensus 158 ~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~-~~~~V~~~D~~G~G~S---------s~~~~~~d 227 (468)
..+|.. ++|...|.+..++|+|||+||++++...|..+++.|. .+|+|+++|+||||.| ++++++++
T Consensus 9 ~~~g~~---l~y~~~G~~~~~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~vi~~d~~g~g~s~~~~~~~~~~~~~~~~~ 85 (356)
T 2e3j_A 9 NCRGTR---IHAVADSPPDQQGPLVVLLHGFPESWYSWRHQIPALAGAGYRVVAIDQRGYGRSSKYRVQKAYRIKELVGD 85 (356)
T ss_dssp EETTEE---EEEEEECCTTCCSCEEEEECCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCCCCSGGGGSHHHHHHH
T ss_pred ccCCeE---EEEEEecCCCCCCCEEEEECCCCCcHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCcccccCHHHHHHH
Confidence 345544 4666666432357899999999999999999999994 5899999999999987 36788999
Q ss_pred HHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 228 VEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 228 l~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
+.++++.+ +.++++|+||||||.+|+.+|.++|++++++|+++++.
T Consensus 86 ~~~~~~~l----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 131 (356)
T 2e3j_A 86 VVGVLDSY----GAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPF 131 (356)
T ss_dssp HHHHHHHT----TCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCC
T ss_pred HHHHHHHc----CCCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcc
Confidence 99999884 44589999999999999999999999999999999765
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-24 Score=202.26 Aligned_cols=213 Identities=15% Similarity=0.131 Sum_probs=155.4
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC---------ChHHHHHHHHHHHHHHhhcCCCCcEEEE
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT---------PFEGLVKFVEETVRREHASSPEKPIYLV 247 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S---------s~~~~~~dl~~~i~~~~~~~~~~~i~Lv 247 (468)
++|+|||+||++++...|..+++.| .++|.|+++|+||||.| +++++++++.++++.+... ..+++++
T Consensus 21 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~d~~~~i~~l~~~--~~~~~l~ 98 (251)
T 3dkr_A 21 TDTGVVLLHAYTGSPNDMNFMARALQRSGYGVYVPLFSGHGTVEPLDILTKGNPDIWWAESSAAVAHMTAK--YAKVFVF 98 (251)
T ss_dssp SSEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECCCTTCSSSCTHHHHHHCCHHHHHHHHHHHHHHHHTT--CSEEEEE
T ss_pred CCceEEEeCCCCCCHHHHHHHHHHHHHCCCEEEecCCCCCCCCChhhhcCcccHHHHHHHHHHHHHHHHHh--cCCeEEE
Confidence 3678999999999999999999999 46899999999999999 7888899999999998765 5699999
Q ss_pred EeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCCh
Q 012190 248 GDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPP 327 (468)
Q Consensus 248 GhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (468)
||||||.+++.+|.++|+.++++++++|......... ... .. ....+......++ .
T Consensus 99 G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~~~~------~~~-~~----~~~~~~~~~~~~~------------~- 154 (251)
T 3dkr_A 99 GLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLV------PGF-LK----YAEYMNRLAGKSD------------E- 154 (251)
T ss_dssp ESHHHHHHHHHHHHHCSSCCEEEESSCCCCTTCBCHH------HHH-HH----HHHHHHHHHTCCC------------C-
T ss_pred EechHHHHHHHHHHhCccceeeEEEecchhhccchhh------HHH-HH----HHHHHHhhcccCc------------c-
Confidence 9999999999999999999999999988764322110 000 00 0111111110000 0
Q ss_pred hHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC
Q 012190 328 RIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ 407 (468)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~ 407 (468)
...+.. ........+..........+.++++|+|+++|++|.+++++ ..+.+.+.++
T Consensus 155 ---~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~ 211 (251)
T 3dkr_A 155 ---STQILA-------------------YLPGQLAAIDQFATTVAADLNLVKQPTFIGQAGQDELVDGR-LAYQLRDALI 211 (251)
T ss_dssp ---HHHHHH-------------------HHHHHHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSBCTT-HHHHHHHHCT
T ss_pred ---hhhHHh-------------------hhHHHHHHHHHHHHHHhccccccCCCEEEEecCCCcccChH-HHHHHHHHhc
Confidence 000000 00001111111112234567888999999999999999999 7999999887
Q ss_pred C-c--EEEEeCCCCccccccC-cHHHHHHHHhcCcccc
Q 012190 408 N-C--IVRNFKDNGHTLLLEE-GISLLTIIKGTCKYRR 441 (468)
Q Consensus 408 ~-~--~~~~i~~aGH~~~~e~-p~~~~~~I~~~~F~~r 441 (468)
+ . ++++++++||+++.+. ++++.+.|. +|+++
T Consensus 212 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~--~fl~~ 247 (251)
T 3dkr_A 212 NAARVDFHWYDDAKHVITVNSAHHALEEDVI--AFMQQ 247 (251)
T ss_dssp TCSCEEEEEETTCCSCTTTSTTHHHHHHHHH--HHHHT
T ss_pred CCCCceEEEeCCCCcccccccchhHHHHHHH--HHHHh
Confidence 6 5 9999999999999986 999999999 56655
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 | Back alignment and structure |
|---|
Probab=99.93 E-value=2.8e-25 Score=210.09 Aligned_cols=231 Identities=18% Similarity=0.184 Sum_probs=138.9
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhc-CCeEEEEecCCCCCCCC------hHHHHHHHHHHHHHHhhcCCCCcEEEEEeC
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVYDRTP------FEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~-~~~~V~~~D~~G~G~Ss------~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS 250 (468)
++|+|||+||++++...|.++++.|. ++|+|+++|+||||.|+ ++++++++.++++.+... ..+++|+|||
T Consensus 15 ~~~~vvllHG~~~~~~~w~~~~~~L~~~~~~vi~~Dl~GhG~S~~~~~~~~~~~a~~l~~~l~~l~~~--~~p~~lvGhS 92 (264)
T 1r3d_A 15 RTPLVVLVHGLLGSGADWQPVLSHLARTQCAALTLDLPGHGTNPERHCDNFAEAVEMIEQTVQAHVTS--EVPVILVGYS 92 (264)
T ss_dssp TBCEEEEECCTTCCGGGGHHHHHHHTTSSCEEEEECCTTCSSCC-------CHHHHHHHHHHHTTCCT--TSEEEEEEET
T ss_pred CCCcEEEEcCCCCCHHHHHHHHHHhcccCceEEEecCCCCCCCCCCCccCHHHHHHHHHHHHHHhCcC--CCceEEEEEC
Confidence 35899999999999999999999997 88999999999999983 788899999999874321 1249999999
Q ss_pred hhHHHHHH---HHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhh----HHHHhhhhcCChhhHHHHhhcc
Q 012190 251 FGGCLALA---VAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCA----VPYLLSYVMGDPIKMAMVNIEN 323 (468)
Q Consensus 251 ~GG~ia~~---~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 323 (468)
|||.+|+. +|.++|++|+++|++++........ ........ ........ ....+....... ...
T Consensus 93 mGG~va~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 163 (264)
T 1r3d_A 93 LGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENE-EKAARWQH-DQQWAQRFSQQPIEHVLSDWYQQA-------VFS 163 (264)
T ss_dssp HHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHH-HHHHHHHH-HHHHHHHHHHSCHHHHHHHHTTSG-------GGT
T ss_pred HhHHHHHHHHHHHhhCccccceEEEecCCCCCCChh-hhhhhhcc-cHHHHHHhccccHHHHHHHHhhhh-------hhh
Confidence 99999999 8889999999999998754322110 00000000 00000000 000000000000 000
Q ss_pred CCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHH-HHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHH
Q 012190 324 RLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLK-SASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRL 402 (468)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l 402 (468)
..+... ...+..... . .............. .........+.++++|+|+|+|++|..++ .+
T Consensus 164 ~~~~~~-~~~~~~~~~----------~-~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~------~~ 225 (264)
T 1r3d_A 164 SLNHEQ-RQTLIAQRS----------A-NLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQ------QL 225 (264)
T ss_dssp TCCHHH-HHHHHHHHT----------T-SCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHHH------HH
T ss_pred ccCHHH-HHHHHHHHh----------h-cchHHHHHHHHhhhhccCccHHHHHHhcCCCEEEEEECCCchHH------HH
Confidence 111110 011110000 0 00000000000000 00011224567899999999999997542 23
Q ss_pred HHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 403 NNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 403 ~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
.+.++ .++++++++||++++|+|+++++.|. +|+.
T Consensus 226 ~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~ 260 (264)
T 1r3d_A 226 AESSG-LSYSQVAQAGHNVHHEQPQAFAKIVQ--AMIH 260 (264)
T ss_dssp HHHHC-SEEEEETTCCSCHHHHCHHHHHHHHH--HHHH
T ss_pred HHHhC-CcEEEcCCCCCchhhcCHHHHHHHHH--HHHH
Confidence 33333 78999999999999999999999999 5654
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.7e-24 Score=202.89 Aligned_cols=217 Identities=17% Similarity=0.196 Sum_probs=152.9
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC-------ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeC
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S-------s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS 250 (468)
+|+|||+||++++...|..+++.| ..+|.|+++|+||||.| +++++++|+.++++.+... .++++|+|||
T Consensus 40 ~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~--~~~i~l~G~S 117 (270)
T 3rm3_A 40 PVGVLLVHGFTGTPHSMRPLAEAYAKAGYTVCLPRLKGHGTHYEDMERTTFHDWVASVEEGYGWLKQR--CQTIFVTGLS 117 (270)
T ss_dssp SEEEEEECCTTCCGGGTHHHHHHHHHTTCEEEECCCTTCSSCHHHHHTCCHHHHHHHHHHHHHHHHTT--CSEEEEEEET
T ss_pred CeEEEEECCCCCChhHHHHHHHHHHHCCCEEEEeCCCCCCCCccccccCCHHHHHHHHHHHHHHHHhh--CCcEEEEEEc
Confidence 689999999999999999999999 45899999999999988 5889999999999997744 5699999999
Q ss_pred hhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHH
Q 012190 251 FGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIK 330 (468)
Q Consensus 251 ~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (468)
|||.+|+.+|.++|+ ++++|+++|+..... ........ .....++.... .....
T Consensus 118 ~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~--------~~~~~~~~--~~~~~~~~~~~------------~~~~~--- 171 (270)
T 3rm3_A 118 MGGTLTLYLAEHHPD-ICGIVPINAAVDIPA--------IAAGMTGG--GELPRYLDSIG------------SDLKN--- 171 (270)
T ss_dssp HHHHHHHHHHHHCTT-CCEEEEESCCSCCHH--------HHHHSCC-----CCSEEECCC------------CCCSC---
T ss_pred HhHHHHHHHHHhCCC-ccEEEEEcceecccc--------cccchhcc--hhHHHHHHHhC------------ccccc---
Confidence 999999999999999 999999998653211 00000000 00000000000 00000
Q ss_pred hhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCc-
Q 012190 331 LEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNC- 409 (468)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~- 409 (468)
. ......+........ ..+..........+.++++|+|+++|++|.+++++ ..+.+.+.+++.
T Consensus 172 -~-------------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~-~~~~~~~~~~~~~ 235 (270)
T 3rm3_A 172 -P-------------DVKELAYEKTPTASL-LQLARLMAQTKAKLDRIVCPALIFVSDEDHVVPPG-NADIIFQGISSTE 235 (270)
T ss_dssp -T-------------TCCCCCCSEEEHHHH-HHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSCTT-HHHHHHHHSCCSS
T ss_pred -c-------------chHhhcccccChhHH-HHHHHHHHHHHhhhhhcCCCEEEEECCCCcccCHH-HHHHHHHhcCCCc
Confidence 0 000000111111111 11111112234567889999999999999999999 799999999865
Q ss_pred -EEEEeCCCCccccccCc-HHHHHHHHhcCcccc
Q 012190 410 -IVRNFKDNGHTLLLEEG-ISLLTIIKGTCKYRR 441 (468)
Q Consensus 410 -~~~~i~~aGH~~~~e~p-~~~~~~I~~~~F~~r 441 (468)
++++++++||+++.+.+ +++.+.|. +|+.+
T Consensus 236 ~~~~~~~~~gH~~~~~~~~~~~~~~i~--~fl~~ 267 (270)
T 3rm3_A 236 KEIVRLRNSYHVATLDYDQPMIIERSL--EFFAK 267 (270)
T ss_dssp EEEEEESSCCSCGGGSTTHHHHHHHHH--HHHHH
T ss_pred ceEEEeCCCCcccccCccHHHHHHHHH--HHHHh
Confidence 99999999999999987 88999888 55544
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=4e-25 Score=207.93 Aligned_cols=220 Identities=19% Similarity=0.246 Sum_probs=148.9
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC-------ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeC
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-------s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS 250 (468)
++|+|||+||++++...|..+++.|.++|+|+++|+||||.| +++++++++.++++.+ +.++++|+|||
T Consensus 19 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~lvG~S 94 (267)
T 3fla_A 19 ARARLVCLPHAGGSASFFFPLAKALAPAVEVLAVQYPGRQDRRHEPPVDSIGGLTNRLLEVLRPF----GDRPLALFGHS 94 (267)
T ss_dssp CSEEEEEECCTTCCGGGGHHHHHHHTTTEEEEEECCTTSGGGTTSCCCCSHHHHHHHHHHHTGGG----TTSCEEEEEET
T ss_pred CCceEEEeCCCCCCchhHHHHHHHhccCcEEEEecCCCCCCCCCCCCCcCHHHHHHHHHHHHHhc----CCCceEEEEeC
Confidence 578999999999999999999999988899999999999977 5888999999888874 45699999999
Q ss_pred hhHHHHHHHHHhCCCC----ceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCC
Q 012190 251 FGGCLALAVAARNPTI----DLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLP 326 (468)
Q Consensus 251 ~GG~ia~~~a~~~P~~----v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (468)
|||.+|+.+|.++|++ +.++|++++.......... . ..... ...... +......+... . .
T Consensus 95 ~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~~-~----~~~~~--~~~~~~-~~~~~~~~~~~-~----~--- 158 (267)
T 3fla_A 95 MGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDDD-V----RGASD--ERLVAE-LRKLGGSDAAM-L----A--- 158 (267)
T ss_dssp HHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCSC-T----TCCCH--HHHHHH-HHHTCHHHHHH-H----H---
T ss_pred hhHHHHHHHHHhhhhhccccccEEEECCCCccccccchh-h----cccch--HHHHHH-HHHhcCcchhh-c----c---
Confidence 9999999999999986 9999999876532221100 0 00000 000000 00000000000 0 0
Q ss_pred hhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhC
Q 012190 327 PRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSL 406 (468)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l 406 (468)
...+...+. ..+.. .+.....+.......+++|+|+|+|++|.+++++ ..+.+.+.+
T Consensus 159 ----~~~~~~~~~---------------~~~~~---~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~ 215 (267)
T 3fla_A 159 ----DPELLAMVL---------------PAIRS---DYRAVETYRHEPGRRVDCPVTVFTGDHDPRVSVG-EARAWEEHT 215 (267)
T ss_dssp ----SHHHHHHHH---------------HHHHH---HHHHHHHCCCCTTCCBSSCEEEEEETTCTTCCHH-HHHGGGGGB
T ss_pred ----CHHHHHHHH---------------HHHHH---HHHhhhcccccccCcCCCCEEEEecCCCCCCCHH-HHHHHHHhc
Confidence 000000000 00000 0000000001122578999999999999999999 799999999
Q ss_pred CC-cEEEEeCCCCccccccCcHHHHHHHHhcCcccccC
Q 012190 407 QN-CIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSR 443 (468)
Q Consensus 407 ~~-~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r~~ 443 (468)
++ ++++++++ ||+.++++|+++.+.|. +|+++..
T Consensus 216 ~~~~~~~~~~g-gH~~~~~~~~~~~~~i~--~fl~~~~ 250 (267)
T 3fla_A 216 TGPADLRVLPG-GHFFLVDQAAPMIATMT--EKLAGPA 250 (267)
T ss_dssp SSCEEEEEESS-STTHHHHTHHHHHHHHH--HHTC---
T ss_pred CCCceEEEecC-CceeeccCHHHHHHHHH--HHhcccc
Confidence 87 99999998 99999999999999999 5666543
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.4e-25 Score=231.68 Aligned_cols=254 Identities=13% Similarity=0.126 Sum_probs=162.7
Q ss_pred eeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC---------ChHHHHHHHHHHHHHHh
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT---------PFEGLVKFVEETVRREH 236 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S---------s~~~~~~dl~~~i~~~~ 236 (468)
++|...|+ +|+|||+||++++...|..+++.| ..+|+|+++|+||||.| +++++++++.++++++.
T Consensus 250 l~~~~~g~----~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~d~~~~~~~l~ 325 (555)
T 3i28_A 250 LHFVELGS----GPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKLG 325 (555)
T ss_dssp EEEEEECS----SSEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTSCCCSCGGGGSHHHHHHHHHHHHHHHT
T ss_pred EEEEEcCC----CCEEEEEeCCCCchhHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCcccccHHHHHHHHHHHHHHcC
Confidence 45555564 789999999999999999999999 45799999999999988 36888999999999854
Q ss_pred hcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhH---------------Hhh
Q 012190 237 ASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDEL---------------HCA 301 (468)
Q Consensus 237 ~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~---------------~~~ 301 (468)
.++++|+||||||.+|+.+|.++|++++++|+++++............. ....+... ...
T Consensus 326 ----~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (555)
T 3i28_A 326 ----LSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLES-IKANPVFDYQLYFQEPGVAEAELEQN 400 (555)
T ss_dssp ----CSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCTTSCHHHH-HHTCGGGHHHHHHHSTTHHHHHHHHC
T ss_pred ----CCcEEEEEecHHHHHHHHHHHhChHheeEEEEEccCCCCCCcccchHHH-HhcCCccchhHHhhCCCchHHHHhhh
Confidence 4589999999999999999999999999999999876544333221111 11111000 000
Q ss_pred HHHHhhhhcCChhhH--------HHHh----------hccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHH
Q 012190 302 VPYLLSYVMGDPIKM--------AMVN----------IENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKL 363 (468)
Q Consensus 302 ~~~~~~~~~~~~~~~--------~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 363 (468)
....+.......... .... ........ ....+...+.. .-......+....
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----------~~~~~~~~~~~~~ 469 (555)
T 3i28_A 401 LSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEE-EIQFYVQQFKK----------SGFRGPLNWYRNM 469 (555)
T ss_dssp HHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTTCCHH-HHHHHHHHHTT----------TTTHHHHHTTSCH
T ss_pred HHHHHHHHhccccccccccccccccccccccCccccccccccCHH-HHHHHHHHHhc----------ccchhHHHHHHhc
Confidence 011111111000000 0000 00000000 00000000000 0000000000000
Q ss_pred HHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccccC
Q 012190 364 LKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSR 443 (468)
Q Consensus 364 ~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r~~ 443 (468)
...........+.++++|+|+|+|++|.++|++ ..+.+.+.++++++++++++||++++|+|+++.+.|. +|+++..
T Consensus 470 ~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~--~fl~~~~ 546 (555)
T 3i28_A 470 ERNWKWACKSLGRKILIPALMVTAEKDFVLVPQ-MSQHMEDWIPHLKRGHIEDCGHWTQMDKPTEVNQILI--KWLDSDA 546 (555)
T ss_dssp HHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGG-GGTTGGGTCTTCEEEEETTCCSCHHHHSHHHHHHHHH--HHHHHHT
T ss_pred cccchhhccccccccccCEEEEEeCCCCCcCHH-HHHHHHhhCCCceEEEeCCCCCCcchhCHHHHHHHHH--HHHHhcc
Confidence 011111223556789999999999999999999 6899999999999999999999999999999999999 6776543
|
| >2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.93 E-value=8.4e-25 Score=215.84 Aligned_cols=261 Identities=14% Similarity=0.130 Sum_probs=159.2
Q ss_pred eeecCCCCCC-CCCCeEEEeCCCCCchh-------------hHHHhHh---hh-cCCeEEEEecCCC--CCCC-------
Q 012190 167 FCPVDCGRPL-KGSPTLLFLPGIDGLGL-------------GLILHHK---PL-GKAFEVRCLHIPV--YDRT------- 219 (468)
Q Consensus 167 ~~y~~~g~~~-~~~p~lV~lHG~~~s~~-------------~~~~~~~---~L-~~~~~V~~~D~~G--~G~S------- 219 (468)
++|...|.+. +++|+|||+||++++.. .|..++. .| .++|+|+++|+|| ||.|
T Consensus 33 l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~vi~~D~~G~~~G~s~~~~~~~ 112 (366)
T 2pl5_A 33 IAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSGPLSIHP 112 (366)
T ss_dssp EEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSSTTSBCT
T ss_pred eeEEeccCcCCCCCceEEEecccCCcccccccccccccccchHHhhcCCcccccccccEEEEecCCCcccCCCCCCCCCC
Confidence 4566556532 24689999999999988 7888874 45 7889999999999 7865
Q ss_pred -------------ChHHHHHHHHHHHHHHhhcCCCCcE-EEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcC
Q 012190 220 -------------PFEGLVKFVEETVRREHASSPEKPI-YLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQ 285 (468)
Q Consensus 220 -------------s~~~~~~dl~~~i~~~~~~~~~~~i-~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~ 285 (468)
+++++++++.++++++ ..+++ +|+||||||.+|+.+|.++|++|+++|+++|..........
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~dl~~~l~~l----~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 188 (366)
T 2pl5_A 113 ETSTPYGSRFPFVSIQDMVKAQKLLVESL----GIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHSAMQIA 188 (366)
T ss_dssp TTSSBCGGGSCCCCHHHHHHHHHHHHHHT----TCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSBCCHHHHH
T ss_pred CCCccccCCCCcccHHHHHHHHHHHHHHc----CCceEEEEEEeCccHHHHHHHHHhCcHhhhheeEeccCccCCCccch
Confidence 5788999999999884 44588 79999999999999999999999999999987643211000
Q ss_pred cch---HHHhhCchhH-----------HhhHHHHhhhhc-CChhhHHHHhhccCCCh------hHHhhhhhhhcchhcch
Q 012190 286 PLF---PILKAMPDEL-----------HCAVPYLLSYVM-GDPIKMAMVNIENRLPP------RIKLEQLSNNLPALLPR 344 (468)
Q Consensus 286 ~~~---~~~~~~~~~~-----------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 344 (468)
... ..+...+... .......+.... ..+..+ .......... ....+.+.....
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 262 (366)
T 2pl5_A 189 FNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKM-REKFGRNPPRGNILSTDFAVGSYLIYQG----- 262 (366)
T ss_dssp HHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHH-HHHHTTSCCSSCTTTTTTTSCGGGGSTT-----
T ss_pred hhHHHHHHHHhCcccccccccccccccchHHHHHhhccccCCHHHH-HHHhhhhhhcccccchhhhHHHHHHHHH-----
Confidence 000 0000000000 000000000000 000000 0000000000 000000000000
Q ss_pred hhhhhccCCcchhHHHHHHHHHHh----HHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC----CcEEEEe-C
Q 012190 345 LSVMSDIIPKDTLLWKLKLLKSAS----AYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ----NCIVRNF-K 415 (468)
Q Consensus 345 ~~~~~~~~~~~~l~~~~~~~~~~~----~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~----~~~~~~i-~ 415 (468)
..................+...+ ......+.++++|+|+|+|++|.++|++ ..+.+.+.++ +++++++ +
T Consensus 263 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 340 (366)
T 2pl5_A 263 -ESFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPA-QSREIVKSLEAADKRVFYVELQS 340 (366)
T ss_dssp -CCSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHH-HHHHHHHHHHHTTCCEEEEEECC
T ss_pred -HhhhcccChhHHHHHHhhhhhhccccccchhhhhccCCCCEEEEecCCCcccCHH-HHHHHHHHhhhcccCeEEEEeCC
Confidence 00001111122222222222111 0123467899999999999999999999 7999999998 8999999 8
Q ss_pred CCCccccccCcHHHHHHHHhcCcccc
Q 012190 416 DNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 416 ~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
++||++++|+|+++.+.|. +|+++
T Consensus 341 ~~gH~~~~e~p~~~~~~i~--~fl~~ 364 (366)
T 2pl5_A 341 GEGHDSFLLKNPKQIEILK--GFLEN 364 (366)
T ss_dssp CBSSGGGGSCCHHHHHHHH--HHHHC
T ss_pred CCCcchhhcChhHHHHHHH--HHHcc
Confidence 9999999999999999999 56654
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3e-24 Score=207.89 Aligned_cols=263 Identities=16% Similarity=0.128 Sum_probs=146.7
Q ss_pred CCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCCC---------hHHHHHH
Q 012190 158 KPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTP---------FEGLVKF 227 (468)
Q Consensus 158 ~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss---------~~~~~~d 227 (468)
..+|.. ++|...|++ ++++|||+||++++... ......+ .++|+|+++|+||||.|+ ++++++|
T Consensus 21 ~~~g~~---l~~~~~g~~--~g~~vvllHG~~~~~~~-~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 94 (317)
T 1wm1_A 21 TGDGHR---IYWELSGNP--NGKPAVFIHGGPGGGIS-PHHRQLFDPERYKVLLFDQRGCGRSRPHASLDNNTTWHLVAD 94 (317)
T ss_dssp CSSSCE---EEEEEEECT--TSEEEEEECCTTTCCCC-GGGGGGSCTTTEEEEEECCTTSTTCBSTTCCTTCSHHHHHHH
T ss_pred cCCCcE---EEEEEcCCC--CCCcEEEECCCCCcccc-hhhhhhccccCCeEEEECCCCCCCCCCCcccccccHHHHHHH
Confidence 345544 456555642 36789999999776532 2233344 468999999999999883 5688999
Q ss_pred HHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHh-hCchhHHhhHHHHh
Q 012190 228 VEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILK-AMPDELHCAVPYLL 306 (468)
Q Consensus 228 l~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 306 (468)
+.++++++ +.++++|+||||||.+|+.+|.++|++|+++|++++....... ...... .........+..+.
T Consensus 95 l~~l~~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 166 (317)
T 1wm1_A 95 IERLREMA----GVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQR----LHWYYQDGASRFFPEKWERVL 166 (317)
T ss_dssp HHHHHHHT----TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHH----HHHHHTSSGGGTSHHHHHHHH
T ss_pred HHHHHHHc----CCCcEEEEEeCHHHHHHHHHHHHCChheeeeeEeccCCCchhh----hhHHhhccchhhcHHHHHHHH
Confidence 99999884 4558999999999999999999999999999999875421100 000000 00000000000000
Q ss_pred hhhcCC---hhhHHHHhhccCCChhHH---hhhh---hhhcchhcchhhhhhccCCcchhHHHHHHH-----HHH----h
Q 012190 307 SYVMGD---PIKMAMVNIENRLPPRIK---LEQL---SNNLPALLPRLSVMSDIIPKDTLLWKLKLL-----KSA----S 368 (468)
Q Consensus 307 ~~~~~~---~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~----~ 368 (468)
...... .................. ...+ .......... ..... +...........+ ... .
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (317)
T 1wm1_A 167 SILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPS-RESAS-FGEDDFALAFARIENHYFTHLGFLES 244 (317)
T ss_dssp TTSCTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCC-GGGGG-GGCHHHHHHHHHHHHHHHHTGGGCSS
T ss_pred hhccchhhcchHHHHHhhhcCCCccccccccccccccccchhhccCC-ccccc-ccccchhhhHHHhhhhhhhccccccc
Confidence 000000 000000000000000000 0000 0000000000 00000 0000000000000 000 0
Q ss_pred HH-HhhhcccCC-ceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCcccccc-CcHHHHHHHHhcCcc
Q 012190 369 AY-ANSRLHAVK-AEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLE-EGISLLTIIKGTCKY 439 (468)
Q Consensus 369 ~~-~~~~l~~i~-~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e-~p~~~~~~I~~~~F~ 439 (468)
.. ....+.+++ +|+|+|+|++|.++|+. ..+.+.+.+|++++++++++||+++.+ .++++.+.|. .|+
T Consensus 245 ~~~~~~~~~~i~~~P~lii~G~~D~~~~~~-~~~~l~~~~p~~~~~~i~~~gH~~~~~~~~~~~~~~i~--~f~ 315 (317)
T 1wm1_A 245 DDQLLRNVPLIRHIPAVIVHGRYDMACQVQ-NAWDLAKAWPEAELHIVEGAGHSYDEPGILHQLMIATD--RFA 315 (317)
T ss_dssp TTHHHHTGGGGTTSCEEEEEETTCSSSCHH-HHHHHHHHCTTSEEEEETTCCSSTTSHHHHHHHHHHHH--HHT
T ss_pred chhhHhhcccccCCCEEEEEecCCCCCCHH-HHHHHHhhCCCceEEEECCCCCCCCCcchHHHHHHHHH--HHh
Confidence 01 234556775 99999999999999998 689999999999999999999998765 5788888888 454
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-24 Score=216.96 Aligned_cols=277 Identities=15% Similarity=0.120 Sum_probs=161.4
Q ss_pred CccCCCCCCceeeeecCCCC----CCCCCCeEEEeCCCCCchhhHHHhHhhhc---C--Ce---EEEEecCCCCCCC---
Q 012190 155 EIIKPDGGPPRWFCPVDCGR----PLKGSPTLLFLPGIDGLGLGLILHHKPLG---K--AF---EVRCLHIPVYDRT--- 219 (468)
Q Consensus 155 ~~~~~dg~~~~~~~y~~~g~----~~~~~p~lV~lHG~~~s~~~~~~~~~~L~---~--~~---~V~~~D~~G~G~S--- 219 (468)
.+...||....+..+.+.+. +....|+|||+||++++...|..+++.|. . +| +|+++|+||||.|
T Consensus 24 ~~~~~dg~~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~~~~~~~~~~~~~L~~~~~~~G~~~~~vi~~D~~G~G~S~~~ 103 (398)
T 2y6u_A 24 TLCATDRLELTYDVYTSAERQRRSRTATRLNLVFLHGSGMSKVVWEYYLPRLVAADAEGNYAIDKVLLIDQVNHGDSAVR 103 (398)
T ss_dssp BSSTTCCCEEEEEEEEESCTTTCCTTCEEEEEEEECCTTCCGGGGGGGGGGSCCCBTTTTEEEEEEEEECCTTSHHHHHH
T ss_pred cccCCCceEEEEEEEecCCCCCCCCCCCCCeEEEEcCCCCcHHHHHHHHHHHHHhhhhcCcceeEEEEEcCCCCCCCCCC
Confidence 34566776643333332220 01124799999999999999999999996 2 68 9999999999966
Q ss_pred ---------ChHHHHHHHHHHHHHHhhc--CCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCC------
Q 012190 220 ---------PFEGLVKFVEETVRREHAS--SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRS------ 282 (468)
Q Consensus 220 ---------s~~~~~~dl~~~i~~~~~~--~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~------ 282 (468)
+++++++|+.++++..... ...++++|+||||||.+++.+|.++|++|+++|+++|.......
T Consensus 104 ~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 183 (398)
T 2y6u_A 104 NRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVVITRKAIGAGRP 183 (398)
T ss_dssp TTTTBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCCCCCSCCCT
T ss_pred CccccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchheeEEEEeccccccccccccccc
Confidence 4678899999999875421 12234999999999999999999999999999999997754210
Q ss_pred CcCcchHHHhhCchhHHhhHHHHhhhhcCChhhH--HHH--hhccCCChhHHhhhhhhh-cchh---cchhhhhhccCCc
Q 012190 283 QLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKM--AMV--NIENRLPPRIKLEQLSNN-LPAL---LPRLSVMSDIIPK 354 (468)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~ 354 (468)
..... ...........+.............. ... .......+. ..+.+... .... .............
T Consensus 184 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (398)
T 2y6u_A 184 GLPPD---SPQIPENLYNSLRLKTCDHFANESEYVKYMRNGSFFTNAHSQ-ILQNIIDFERTKASGDDEDGGPVRTKMEQ 259 (398)
T ss_dssp TCCTT---CCCCCHHHHHHHHHTCCCEESSHHHHHHHHHHTSTTTTSCHH-HHHHHHHHHEEC--------CCEEESSCH
T ss_pred ccccc---ccccchhhHHHhhhhccccCCCHHHHHHHhhcCcccccCCHH-HHHHHHHhcCccccccccCCCceEecCCc
Confidence 00000 00000000000000000000000000 000 000011111 01111110 0000 0000000000000
Q ss_pred chhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHH
Q 012190 355 DTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIK 434 (468)
Q Consensus 355 ~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~ 434 (468)
.........+..........+..+++|+|+|+|++|.++|++ ..+.+.+.++++++++++++||++++|+|+++.+.|.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~~~~-~~~~l~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~ 338 (398)
T 2y6u_A 260 AQNLLCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWCPPQ-NQLFLQKTLQNYHLDVIPGGSHLVNVEAPDLVIERIN 338 (398)
T ss_dssp HHHHHTTSCGGGTHHHHHHHGGGCCSEEEEEEETTCCSSCHH-HHHHHHHHCSSEEEEEETTCCTTHHHHSHHHHHHHHH
T ss_pred hhhhhhhcccccchHHHHHhccccCCCEEEEEcCCCCCCCHH-HHHHHHHhCCCceEEEeCCCCccchhcCHHHHHHHHH
Confidence 000000000000111223567889999999999999999999 7999999999999999999999999999999999999
Q ss_pred hc
Q 012190 435 GT 436 (468)
Q Consensus 435 ~~ 436 (468)
+|
T Consensus 339 ~f 340 (398)
T 2y6u_A 339 HH 340 (398)
T ss_dssp HH
T ss_pred HH
Confidence 43
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.92 E-value=2.4e-24 Score=213.65 Aligned_cols=260 Identities=13% Similarity=0.113 Sum_probs=158.4
Q ss_pred eeecCCCCCCC-CCCeEEEeCCCCCchhh---------HHHhHh---hh-cCCeEEEEecCCC-CCCC------------
Q 012190 167 FCPVDCGRPLK-GSPTLLFLPGIDGLGLG---------LILHHK---PL-GKAFEVRCLHIPV-YDRT------------ 219 (468)
Q Consensus 167 ~~y~~~g~~~~-~~p~lV~lHG~~~s~~~---------~~~~~~---~L-~~~~~V~~~D~~G-~G~S------------ 219 (468)
++|...|.+.. ++|+|||+||++++... |..++. .| .++|+|+++|+|| ||.|
T Consensus 46 l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~~g~s~~~~~~~~~~g~ 125 (377)
T 2b61_A 46 VAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSINPQTGK 125 (377)
T ss_dssp EEEEEESCCCTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBCTTTSS
T ss_pred EEEEecccccccCCCeEEEeCCCCCccccccccccchhhhhccCcccccccCCceEEEecCCCCCCCCCCCcccCccccc
Confidence 56666665322 36899999999999998 888885 48 7899999999999 5654
Q ss_pred ---------ChHHHHHHHHHHHHHHhhcCCCCcEE-EEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchH
Q 012190 220 ---------PFEGLVKFVEETVRREHASSPEKPIY-LVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFP 289 (468)
Q Consensus 220 ---------s~~~~~~dl~~~i~~~~~~~~~~~i~-LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~ 289 (468)
+++++++++.++++.+ ..++++ |+||||||.+|+.+|.++|++|+++|++++......... ....
T Consensus 126 ~~~~~~~~~~~~~~~~~l~~~l~~l----~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~-~~~~ 200 (377)
T 2b61_A 126 PYGSQFPNIVVQDIVKVQKALLEHL----GISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEAI-GFNH 200 (377)
T ss_dssp BCGGGCCCCCHHHHHHHHHHHHHHT----TCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHHH-HHHH
T ss_pred cccccCCcccHHHHHHHHHHHHHHc----CCcceeEEEEEChhHHHHHHHHHHCchhhheeEEeccCccccccch-hHHH
Confidence 4678899999999874 445887 999999999999999999999999999998653321000 0000
Q ss_pred ----HHhhCchhHH----------hh--HHHHhhhh-cCChhhHHHHhhccCCCh-------hHHhhhhhhhcchhcchh
Q 012190 290 ----ILKAMPDELH----------CA--VPYLLSYV-MGDPIKMAMVNIENRLPP-------RIKLEQLSNNLPALLPRL 345 (468)
Q Consensus 290 ----~~~~~~~~~~----------~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 345 (468)
.+...+.+.. .. ........ ...+..+ ...+...... ....+.+.....
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 273 (377)
T 2b61_A 201 VMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQL-AKAFGRATKSDGSFWGDYFQVESYLSYQG------ 273 (377)
T ss_dssp HHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHH-HHHTTTCBCTTCCTTSCCBHHHHHHHHHH------
T ss_pred HHHHHHhcCccccccchhccCCCchhhhHHHHhhhhcccCHHHH-HHHhccccccccccccchHHHHHHHHhhh------
Confidence 0000000000 00 00000000 0000000 0000000000 000011100000
Q ss_pred hhhhccCCcchhHHHHHHHHHHh-----HHHhhhcccCCceEEEEEeCCCCCCCc----HHHHHHHHHhCCCcEEEEeC-
Q 012190 346 SVMSDIIPKDTLLWKLKLLKSAS-----AYANSRLHAVKAEVLVLASGKDNMLPS----EDEAKRLNNSLQNCIVRNFK- 415 (468)
Q Consensus 346 ~~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~l~~i~~PvLlI~G~~D~~v~~----~~~~~~l~~~l~~~~~~~i~- 415 (468)
......+....+......+...+ ......+.++++|+|+|+|++|.++|+ + ..+.+.+.++++++++++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~-~~~~l~~~~~~~~~~~i~~ 352 (377)
T 2b61_A 274 KKFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYK-SKQLLEQSGVDLHFYEFPS 352 (377)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHH-HHHHHHHTTCEEEEEEECC
T ss_pred hhhccccChhHHHHHHHHHhccccccccchHHhhhhhcCCCEEEEecCCcccCCccchHH-HHHHHHhcCCCceEEEeCC
Confidence 00001112222222222221111 011356688999999999999999999 7 688999999999999999
Q ss_pred CCCccccccCcHHHHHHHHhcCcccc
Q 012190 416 DNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 416 ~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
++||++++|+|+++++.|. +|+.+
T Consensus 353 ~~gH~~~~e~p~~~~~~i~--~fl~~ 376 (377)
T 2b61_A 353 DYGHDAFLVDYDQFEKRIR--DGLAG 376 (377)
T ss_dssp TTGGGHHHHCHHHHHHHHH--HHHHT
T ss_pred CCCchhhhcCHHHHHHHHH--HHHhc
Confidence 9999999999999999999 56543
|
| >2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=8.9e-25 Score=222.72 Aligned_cols=261 Identities=10% Similarity=0.085 Sum_probs=160.6
Q ss_pred eeecCCCCCC-CCCCeEEEeCCCCCchhh---HHHhHh---hh-cCCeEEEEecCCC--CCCC-----------------
Q 012190 167 FCPVDCGRPL-KGSPTLLFLPGIDGLGLG---LILHHK---PL-GKAFEVRCLHIPV--YDRT----------------- 219 (468)
Q Consensus 167 ~~y~~~g~~~-~~~p~lV~lHG~~~s~~~---~~~~~~---~L-~~~~~V~~~D~~G--~G~S----------------- 219 (468)
++|...|... .++|+|||+||++++... |..++. .| .++|+|+++|+|| ||.|
T Consensus 96 l~y~~~G~~~~~~~p~vvllHG~~~~~~~~~~w~~~~~~~~~L~~~~~~Vi~~D~~G~~~G~S~~~~~~~~~~~~~~~~~ 175 (444)
T 2vat_A 96 VAYKSWGRMNVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAEGQRPYGA 175 (444)
T ss_dssp EEEEEESCCCTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC--CBCGG
T ss_pred EEEEEecCCCCCCCCeEEEECCCCcccchhhHHHHhcCccchhhccCCEEEEecCCCCCCCCCCCCCCCccccccccccc
Confidence 5666666532 236899999999999998 888875 57 7899999999999 6765
Q ss_pred -----ChHHHHHHHHHHHHHHhhcCCCCc-EEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHH---
Q 012190 220 -----PFEGLVKFVEETVRREHASSPEKP-IYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPI--- 290 (468)
Q Consensus 220 -----s~~~~~~dl~~~i~~~~~~~~~~~-i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~--- 290 (468)
+++++++++.++++++. .++ ++|+||||||.+|+.+|.++|++|+++|++++........ ......
T Consensus 176 ~f~~~t~~~~a~dl~~ll~~l~----~~~~~~lvGhSmGG~ial~~A~~~p~~v~~lVli~~~~~~~~~~-~~~~~~~~~ 250 (444)
T 2vat_A 176 KFPRTTIRDDVRIHRQVLDRLG----VRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSGWC-AAWFETQRQ 250 (444)
T ss_dssp GCCCCCHHHHHHHHHHHHHHHT----CCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCHHH-HHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHhcC----CccceEEEEECHHHHHHHHHHHhChHhhheEEEEeccccCCccc-hhHHHHHHH
Confidence 57889999999999854 347 9999999999999999999999999999999876432110 000000
Q ss_pred -HhhCchhH------------HhhHHHHhhhhcCChhhHHHHhhccCCC-----------------------------hh
Q 012190 291 -LKAMPDEL------------HCAVPYLLSYVMGDPIKMAMVNIENRLP-----------------------------PR 328 (468)
Q Consensus 291 -~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~ 328 (468)
+...+.+. ..........+...........+..... ..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (444)
T 2vat_A 251 CIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTDSGNSHRAGQPI 330 (444)
T ss_dssp HHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC---------------------------CG
T ss_pred HHhcCCccccccccccCCcccchhHHHhhhhccccChHHHHHHhccCccccccccccccccccccccccccccccccCch
Confidence 00000000 0000000000000000000000000000 00
Q ss_pred HHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhH------HHhhhcccCCceEEEEEeCCCCCCCcHHHHHHH
Q 012190 329 IKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASA------YANSRLHAVKAEVLVLASGKDNMLPSEDEAKRL 402 (468)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l 402 (468)
...+.+.+.. .......+....+......+...+. .....+.++++|+|+|+|++|.+++++ ..+.+
T Consensus 331 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~~p~~-~~~~l 403 (444)
T 2vat_A 331 EAVSSYLRYQ------AQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFD-EHVEM 403 (444)
T ss_dssp GGHHHHHHHH------HHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHH-HHHHH
T ss_pred hhHHHHHHHH------HHHHhhccCccHHHHHHHHhhhhhccccccccHHHHhhcCCCCEEEEEeCCCCCCCHH-HHHHH
Confidence 0000000000 0000011111112111122211110 023557889999999999999999999 79999
Q ss_pred HHhCCCcEEEEeC-CCCccccccCcHHHHHHHHhcCcccc
Q 012190 403 NNSLQNCIVRNFK-DNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 403 ~~~l~~~~~~~i~-~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
.+.++++++++++ ++||++++|+|+++++.|. +|+++
T Consensus 404 ~~~~p~~~~~~i~~~~GH~~~~e~p~~~~~~i~--~fL~~ 441 (444)
T 2vat_A 404 GRSIPNSRLCVVDTNEGHDFFVMEADKVNDAVR--GFLDQ 441 (444)
T ss_dssp HHHSTTEEEEECCCSCGGGHHHHTHHHHHHHHH--HHHTC
T ss_pred HHHCCCcEEEEeCCCCCcchHHhCHHHHHHHHH--HHHHH
Confidence 9999999999999 8999999999999999999 56654
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 | Back alignment and structure |
|---|
Probab=99.92 E-value=2.2e-24 Score=208.35 Aligned_cols=110 Identities=21% Similarity=0.190 Sum_probs=85.9
Q ss_pred CCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCCC---------hHHHHHH
Q 012190 158 KPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTP---------FEGLVKF 227 (468)
Q Consensus 158 ~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss---------~~~~~~d 227 (468)
..+|.. ++|...|++ ++++|||+||++++... ......+ .++|+|+++|+||||.|+ ++++++|
T Consensus 18 ~~~g~~---l~y~~~G~~--~g~pvvllHG~~~~~~~-~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 91 (313)
T 1azw_A 18 VDDRHT---LYFEQCGNP--HGKPVVMLHGGPGGGCN-DKMRRFHDPAKYRIVLFDQRGSGRSTPHADLVDNTTWDLVAD 91 (313)
T ss_dssp CSSSCE---EEEEEEECT--TSEEEEEECSTTTTCCC-GGGGGGSCTTTEEEEEECCTTSTTSBSTTCCTTCCHHHHHHH
T ss_pred cCCCCE---EEEEecCCC--CCCeEEEECCCCCcccc-HHHHHhcCcCcceEEEECCCCCcCCCCCcccccccHHHHHHH
Confidence 335544 456655642 46789999998776532 2233444 468999999999999983 6788999
Q ss_pred HHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 228 VEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 228 l~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
+.++++++ +.++++|+||||||.+|+.+|.++|++|+++|++++..
T Consensus 92 l~~l~~~l----~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~~ 137 (313)
T 1azw_A 92 IERLRTHL----GVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFL 137 (313)
T ss_dssp HHHHHHHT----TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred HHHHHHHh----CCCceEEEEECHHHHHHHHHHHhChhheeEEEEecccc
Confidence 99999884 44589999999999999999999999999999998754
|
| >4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.2e-24 Score=215.71 Aligned_cols=140 Identities=15% Similarity=0.212 Sum_probs=110.2
Q ss_pred hHHHHhhcCCCcchHHHHHHhccCcc-CCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcC------
Q 012190 132 ELEVLWDDGYGTDSVKDYLDAAKEII-KPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGK------ 204 (468)
Q Consensus 132 ~~~~~~~~~~~~~~~~~y~~~~~~~~-~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~------ 204 (468)
.+...|.++|.....+..+.....+. ..+|... +|...+.+.+++++|||+||++++...|..+++.|.+
T Consensus 47 ~~~~~w~~~~dwr~~e~~ln~~~~~~~~i~g~~i---~~~~~~~~~~~~~plll~HG~~~s~~~~~~~~~~L~~~~~~~~ 123 (388)
T 4i19_A 47 ELAEYWRDGFDWRAAERRINQYPQFTTEIDGATI---HFLHVRSPEPDATPMVITHGWPGTPVEFLDIIGPLTDPRAHGG 123 (388)
T ss_dssp HHHHHHHHTCCHHHHHHHHHTSCEEEEEETTEEE---EEEEECCSSTTCEEEEEECCTTCCGGGGHHHHHHHHCGGGGTS
T ss_pred HHHHHHhhhcChhHHHHHhccCCcEEEEECCeEE---EEEEccCCCCCCCeEEEECCCCCCHHHHHHHHHHHhCcccccC
Confidence 35567788887555555554444443 4466553 4433222223578999999999999999999999977
Q ss_pred ----CeEEEEecCCCCCCC--------ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEE
Q 012190 205 ----AFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILIL 272 (468)
Q Consensus 205 ----~~~V~~~D~~G~G~S--------s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVl 272 (468)
+|+|+++|+||||.| +++++++++.++++.+ +.++++++||||||.+++.+|.++|++|.++|+
T Consensus 124 ~~~~~~~vi~~dl~G~G~S~~~~~~~~~~~~~a~~~~~l~~~l----g~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl 199 (388)
T 4i19_A 124 DPADAFHLVIPSLPGFGLSGPLKSAGWELGRIAMAWSKLMASL----GYERYIAQGGDIGAFTSLLLGAIDPSHLAGIHV 199 (388)
T ss_dssp CGGGCEEEEEECCTTSGGGCCCSSCCCCHHHHHHHHHHHHHHT----TCSSEEEEESTHHHHHHHHHHHHCGGGEEEEEE
T ss_pred CCCCCeEEEEEcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc----CCCcEEEEeccHHHHHHHHHHHhChhhceEEEE
Confidence 899999999999987 4789999999999884 455899999999999999999999999999999
Q ss_pred eCCCCC
Q 012190 273 SNPATS 278 (468)
Q Consensus 273 i~p~~~ 278 (468)
++|...
T Consensus 200 ~~~~~~ 205 (388)
T 4i19_A 200 NLLQTN 205 (388)
T ss_dssp SSCCCC
T ss_pred ecCCCC
Confidence 997654
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A | Back alignment and structure |
|---|
Probab=99.92 E-value=8.3e-25 Score=223.67 Aligned_cols=245 Identities=11% Similarity=0.096 Sum_probs=159.0
Q ss_pred eeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC-------ChHHHHHHHHHHHHHHhhc
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHAS 238 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S-------s~~~~~~dl~~~i~~~~~~ 238 (468)
++|...|+ +|+|||+||++++...|..+++.| ..+|+|+++|+||||.| +++++++|+.++++.+.
T Consensus 16 l~y~~~G~----gp~VV~lHG~~~~~~~~~~l~~~La~~Gy~Vi~~D~rG~G~S~~~~~~~s~~~~a~dl~~~l~~l~-- 89 (456)
T 3vdx_A 16 LYYEDHGT----GVPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNTVLETLD-- 89 (456)
T ss_dssp EEEEEESS----SEEEEEECCTTCCGGGGTTHHHHHHHHTEEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHHT--
T ss_pred EEEEEeCC----CCEEEEECCCCCcHHHHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC--
Confidence 45666665 789999999999999999999999 78999999999999988 48899999999999854
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHhC-CCCceEEEEeCCCCCCCCCCcCc-----chHHHhhCchhHH----hhHHHHhhh
Q 012190 239 SPEKPIYLVGDSFGGCLALAVAARN-PTIDLILILSNPATSFGRSQLQP-----LFPILKAMPDELH----CAVPYLLSY 308 (468)
Q Consensus 239 ~~~~~i~LvGhS~GG~ia~~~a~~~-P~~v~~lVli~p~~~~~~~~~~~-----~~~~~~~~~~~~~----~~~~~~~~~ 308 (468)
.++++|+||||||.+++.+|+++ |++++++|+++|........... .......+..... ......+..
T Consensus 90 --~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (456)
T 3vdx_A 90 --LQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFND 167 (456)
T ss_dssp --CCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCCSCCBCCSSCCSCSBCHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred --CCCeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCcccccccccccccccchHHHHHHHHHhhhccchHHHHHHHHH
Confidence 45899999999999999999887 99999999999876432221110 0011111000000 000000000
Q ss_pred hcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeC
Q 012190 309 VMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASG 388 (468)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~ 388 (468)
...... .......... ......... .....................+..+++|+|+|+|+
T Consensus 168 ~~~~~~-----~~~~~~~~~~-~~~~~~~~~--------------~~~~~~~~~~~~~~~~d~~~~l~~i~~PvLiI~G~ 227 (456)
T 3vdx_A 168 FYNLDE-----NLGTRISEEA-VRNSWNTAA--------------SGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGT 227 (456)
T ss_dssp HTTTTT-----SBTTTBCHHH-HHHHHHHHH--------------TSCTTHHHHGGGGTTCCCTTTSTTCCSCCEEEEET
T ss_pred Hhcccc-----cccccccHHH-HHHHhhhcc--------------ccchhhhhhhhhhhhhhHHHHhhhCCCCEEEEEeC
Confidence 000000 0000000000 000000000 00000000000000111234567899999999999
Q ss_pred CCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 389 KDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 389 ~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
+|.++|++...+.+.+.++++++++++++||+++.++|+++.+.|. .|+++
T Consensus 228 ~D~~vp~~~~~~~l~~~~~~~~~~~i~gagH~~~~e~p~~v~~~I~--~FL~~ 278 (456)
T 3vdx_A 228 GDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTALL--AFLAK 278 (456)
T ss_dssp TCSSSCGGGTHHHHHHHCTTSEEEEETTCCSCTTTTTHHHHHHHHH--HHHHH
T ss_pred CCCCcCHHHHHHHHHHHCCCceEEEeCCCCCcchhhCHHHHHHHHH--HHHHH
Confidence 9999998733778888889999999999999999999999999999 56654
|
| >1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.3e-24 Score=211.08 Aligned_cols=272 Identities=15% Similarity=0.109 Sum_probs=160.7
Q ss_pred cCccCCCCCCceeeeecCCCC---CCCCCCeEEEeCCCCCchhhHHHhHh------hh-cCCeEEEEecCCCCCCCC---
Q 012190 154 KEIIKPDGGPPRWFCPVDCGR---PLKGSPTLLFLPGIDGLGLGLILHHK------PL-GKAFEVRCLHIPVYDRTP--- 220 (468)
Q Consensus 154 ~~~~~~dg~~~~~~~y~~~g~---~~~~~p~lV~lHG~~~s~~~~~~~~~------~L-~~~~~V~~~D~~G~G~Ss--- 220 (468)
..+...||.......+..... +..++|+|||+||++++...|..... .| ..+|+|+++|+||||.|+
T Consensus 30 ~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~~~~~~~~~~~~~a~~l~~~G~~vi~~D~~G~G~S~~~~ 109 (377)
T 1k8q_A 30 YEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTWARRNL 109 (377)
T ss_dssp EEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTSTTSCEES
T ss_pred EEeEcCCCCEEEEEEecCCCCCccccCCCCeEEEECCCCCchhhhhcCCCcccHHHHHHHCCCCEEEecCCCCCCCCCCC
Confidence 345667776544333322210 01247899999999999999887665 77 457999999999999773
Q ss_pred -------------hHHHHH-HHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCC---CceEEEEeCCCCCCCCCC
Q 012190 221 -------------FEGLVK-FVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPT---IDLILILSNPATSFGRSQ 283 (468)
Q Consensus 221 -------------~~~~~~-dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~---~v~~lVli~p~~~~~~~~ 283 (468)
++++++ |+.++++.+....+.++++|+||||||.+++.+|.++|+ +++++|+++|........
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~v~~lvl~~~~~~~~~~~ 189 (377)
T 1k8q_A 110 YYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVATVKYTE 189 (377)
T ss_dssp SSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEESCCSCCSSCC
T ss_pred CCCCCcccccCccHHHHHhhhHHHHHHHHHHhcCcCceEEEEechhhHHHHHHHhcCchhhhhhhEEEEeCCchhcccch
Confidence 457787 888888776555566799999999999999999999998 899999999876433211
Q ss_pred cCcchHHHhhCch-hHHh------------hHHHHhhhhcCCh----hhHHHHhhccCCChhHHhhhhhhhcchhcchhh
Q 012190 284 LQPLFPILKAMPD-ELHC------------AVPYLLSYVMGDP----IKMAMVNIENRLPPRIKLEQLSNNLPALLPRLS 346 (468)
Q Consensus 284 ~~~~~~~~~~~~~-~~~~------------~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (468)
. .. ........ .+.. ............. .......................
T Consensus 190 ~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 257 (377)
T 1k8q_A 190 T-LI-NKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLD---------- 257 (377)
T ss_dssp S-GG-GGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGGGSCGGGHH----------
T ss_pred h-HH-HHHHhhccHHHHhhcCccccCcHHHHHHHHHHHhhCCccHHHHHHHHHHHhcCCCcccCCHHHHH----------
Confidence 1 01 11000000 0000 0000000000000 00000000000000000000000
Q ss_pred hhhccCCcc----hhHHHHHHHHH--------------HhHH-----HhhhcccCCceEEEEEeCCCCCCCcHHHHHHHH
Q 012190 347 VMSDIIPKD----TLLWKLKLLKS--------------ASAY-----ANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLN 403 (468)
Q Consensus 347 ~~~~~~~~~----~l~~~~~~~~~--------------~~~~-----~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~ 403 (468)
......+.. .+......... ...+ ....+.++++|+|+|+|++|.++|++ ..+.+.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~-~~~~~~ 336 (377)
T 1k8q_A 258 VYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPH-DVDLLL 336 (377)
T ss_dssp HHHTTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSCHH-HHHHHH
T ss_pred HHhccCCCCccHHHHHHHHHHHhcCCeeeccCCcchhhHHHcCCCCCcccCHhhCCCCEEEEEeCCCcccCHH-HHHHHH
Confidence 000000100 00000000000 0000 01237889999999999999999999 799999
Q ss_pred HhCCCcE-EEEeCCCCccccc---cCcHHHHHHHHhcCccc
Q 012190 404 NSLQNCI-VRNFKDNGHTLLL---EEGISLLTIIKGTCKYR 440 (468)
Q Consensus 404 ~~l~~~~-~~~i~~aGH~~~~---e~p~~~~~~I~~~~F~~ 440 (468)
+.+++++ +++++++||+.++ ++|+++.+.|. +|++
T Consensus 337 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~--~fl~ 375 (377)
T 1k8q_A 337 SKLPNLIYHRKIPPYNHLDFIWAMDAPQAVYNEIV--SMMG 375 (377)
T ss_dssp TTCTTEEEEEEETTCCTTHHHHCTTHHHHTHHHHH--HHHH
T ss_pred HhCcCcccEEecCCCCceEEEecCCcHHHHHHHHH--HHhc
Confidence 9999987 9999999999997 89999999998 4554
|
| >1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.92 E-value=2.1e-24 Score=207.71 Aligned_cols=226 Identities=11% Similarity=0.045 Sum_probs=142.3
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhcC---CeEEEEecCCCCCCCC------hHHHHHHHHHHHHHHhhcCCCCcEEEEE
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLGK---AFEVRCLHIPVYDRTP------FEGLVKFVEETVRREHASSPEKPIYLVG 248 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~---~~~V~~~D~~G~G~Ss------~~~~~~dl~~~i~~~~~~~~~~~i~LvG 248 (468)
++|+|||+||++++...|..+++.|.+ +|+|+++|+||||.|+ ++++++++.++++. . .++++|+|
T Consensus 35 ~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~l~~~~~~----~-~~~~~lvG 109 (302)
T 1pja_A 35 SYKPVIVVHGLFDSSYSFRHLLEYINETHPGTVVTVLDLFDGRESLRPLWEQVQGFREAVVPIMAK----A-PQGVHLIC 109 (302)
T ss_dssp CCCCEEEECCTTCCGGGGHHHHHHHHHHSTTCCEEECCSSCSGGGGSCHHHHHHHHHHHHHHHHHH----C-TTCEEEEE
T ss_pred CCCeEEEECCCCCChhHHHHHHHHHHhcCCCcEEEEeccCCCccchhhHHHHHHHHHHHHHHHhhc----C-CCcEEEEE
Confidence 478899999999999999999999954 6999999999999883 55566666666655 3 46899999
Q ss_pred eChhHHHHHHHHHhCCC-CceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHH--HHhhccCC
Q 012190 249 DSFGGCLALAVAARNPT-IDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMA--MVNIENRL 325 (468)
Q Consensus 249 hS~GG~ia~~~a~~~P~-~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 325 (468)
|||||.+|+.+|.++|+ +|+++|+++++....... .. .............. ......+.... .......
T Consensus 110 hS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~-~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~- 181 (302)
T 1pja_A 110 YSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGD-TD--YLKWLFPTSMRSNL----YRICYSPWGQEFSICNYWHD- 181 (302)
T ss_dssp ETHHHHHHHHHHHHCTTCCEEEEEEESCCTTCBCSC-CH--HHHHHCTTCCHHHH----HHHHTSTTGGGSTGGGGBCC-
T ss_pred ECHHHHHHHHHHHhcCccccCEEEEECCCccccccc-ch--hhhhHHHHHHHHHH----hhccchHHHHHhhhhhcccC-
Confidence 99999999999999999 799999999866322111 00 01111111111000 00000000000 0000000
Q ss_pred ChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHh
Q 012190 326 PPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNS 405 (468)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~ 405 (468)
+.. ...+.. .......+....... ........+.+++ |+++|+|++|.+++++ ..+.+.+.
T Consensus 182 -~~~-~~~~~~----~~~~~~~~~~~~~~~-----------~~~~~~~~l~~i~-P~lii~G~~D~~v~~~-~~~~~~~~ 242 (302)
T 1pja_A 182 -PHH-DDLYLN----ASSFLALINGERDHP-----------NATVWRKNFLRVG-HLVLIGGPDDGVITPW-QSSFFGFY 242 (302)
T ss_dssp -TTC-HHHHHH----HCSSHHHHTTSSCCT-----------THHHHHHHHTTCS-EEEEEECTTCSSSSSG-GGGGTCEE
T ss_pred -hhh-hhhhhc----cchHHHHhhcCCccc-----------cchhHHHHHhccC-cEEEEEeCCCCccchh-HhhHhhhc
Confidence 000 000000 000000000000000 0011134668899 9999999999999998 57777655
Q ss_pred CCC---------------------------cEEEEeCCCCccccccCcHHHHHHHHh
Q 012190 406 LQN---------------------------CIVRNFKDNGHTLLLEEGISLLTIIKG 435 (468)
Q Consensus 406 l~~---------------------------~~~~~i~~aGH~~~~e~p~~~~~~I~~ 435 (468)
.++ +++++++++||+++.|+|+++++.|.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 299 (302)
T 1pja_A 243 DANETVLEMEEQLVYLRDSFGLKTLLARGAIVRCPMAGISHTAWHSNRTLYETCIEP 299 (302)
T ss_dssp CTTCCEECGGGSHHHHTTTTSHHHHHHTTCEEEEECSSCCTTTTTSCHHHHHHHTGG
T ss_pred CCcccccchhhhhhhhhhhhchhhHhhcCCeEEEEecCccccccccCHHHHHHHHHH
Confidence 555 999999999999999999999999993
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.91 E-value=3e-24 Score=204.99 Aligned_cols=233 Identities=15% Similarity=0.073 Sum_probs=145.6
Q ss_pred CCCeEEEeCC--CCCchhhHHHhHhhhcCCeEEEEecCCCCCCCC--------hHHHHHHHHHHHHHHhhcCCCCcEEEE
Q 012190 178 GSPTLLFLPG--IDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP--------FEGLVKFVEETVRREHASSPEKPIYLV 247 (468)
Q Consensus 178 ~~p~lV~lHG--~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss--------~~~~~~dl~~~i~~~~~~~~~~~i~Lv 247 (468)
++|+|||+|| ++++...|..+++.|.++|+|+++|+||||.|+ ++++++++.++++++ ..++++|+
T Consensus 40 ~~p~vv~lHG~G~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~lv 115 (292)
T 3l80_A 40 GNPCFVFLSGAGFFSTADNFANIIDKLPDSIGILTIDAPNSGYSPVSNQANVGLRDWVNAILMIFEHF----KFQSYLLC 115 (292)
T ss_dssp CSSEEEEECCSSSCCHHHHTHHHHTTSCTTSEEEEECCTTSTTSCCCCCTTCCHHHHHHHHHHHHHHS----CCSEEEEE
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHHhhcCeEEEEcCCCCCCCCCCCcccccHHHHHHHHHHHHHHh----CCCCeEEE
Confidence 3689999995 467788999999999999999999999999884 789999999999984 45599999
Q ss_pred EeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCC--CCcC----cchHHHhhCchhHH-h-hHHHHhhhhcCChhhHHHH
Q 012190 248 GDSFGGCLALAVAARNPTIDLILILSNPATSFGR--SQLQ----PLFPILKAMPDELH-C-AVPYLLSYVMGDPIKMAMV 319 (468)
Q Consensus 248 GhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~--~~~~----~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~ 319 (468)
||||||.+|+.+|.++|++|+++|+++|...... .... .............. . .....+.............
T Consensus 116 GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (292)
T 3l80_A 116 VHSIGGFAALQIMNQSSKACLGFIGLEPTTVMIYRAGFSSDLYPQLALRRQKLKTAADRLNYLKDLSRSHFSSQQFKQLW 195 (292)
T ss_dssp EETTHHHHHHHHHHHCSSEEEEEEEESCCCHHHHHHCTTSSSSHHHHHHHHTCCSHHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred EEchhHHHHHHHHHhCchheeeEEEECCCCcchhhhccccccchhHHHHHHHHhccCchhhhHhhccccccCHHHHHHhH
Confidence 9999999999999999999999999997542100 0000 00011111111000 0 0000000000000000000
Q ss_pred hhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHH
Q 012190 320 NIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEA 399 (468)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~ 399 (468)
.........+... ..+.. ...+.. +. .......+.. ++|+|+|+|++|..++++ .
T Consensus 196 ---------~~~~~~~~~~~~~-~~l~~-~~~~~~--~~---------~~~~~~~l~~-~~P~lii~g~~D~~~~~~--~ 250 (292)
T 3l80_A 196 ---------RGYDYCQRQLNDV-QSLPD-FKIRLA--LG---------EEDFKTGISE-KIPSIVFSESFREKEYLE--S 250 (292)
T ss_dssp ---------HHHHHHHHHHHTT-TTSTT-CCSSCC--CC---------GGGGCCCCCT-TSCEEEEECGGGHHHHHT--S
T ss_pred ---------HHHHHHHHHHHhh-hhccc-cchhhh--hc---------chhhhhccCC-CCCEEEEEccCccccchH--H
Confidence 0000000000000 00000 000000 00 0000134456 899999999999988776 3
Q ss_pred HHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccccC
Q 012190 400 KRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSR 443 (468)
Q Consensus 400 ~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r~~ 443 (468)
.+.+.+++++ ++++++||++++|+|+++++.|. .|+++.+
T Consensus 251 -~~~~~~~~~~-~~~~~~gH~~~~e~p~~~~~~i~--~fl~~~~ 290 (292)
T 3l80_A 251 -EYLNKHTQTK-LILCGQHHYLHWSETNSILEKVE--QLLSNHE 290 (292)
T ss_dssp -TTCCCCTTCE-EEECCSSSCHHHHCHHHHHHHHH--HHHHTCT
T ss_pred -HHhccCCCce-eeeCCCCCcchhhCHHHHHHHHH--HHHHhcc
Confidence 6777788889 99999999999999999999999 6777543
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=99.91 E-value=9.8e-24 Score=190.70 Aligned_cols=182 Identities=14% Similarity=0.214 Sum_probs=151.1
Q ss_pred CCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHH--hHhhh-cCCeEEEEecCCCCCCC-----------ChHH
Q 012190 158 KPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLIL--HHKPL-GKAFEVRCLHIPVYDRT-----------PFEG 223 (468)
Q Consensus 158 ~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~--~~~~L-~~~~~V~~~D~~G~G~S-----------s~~~ 223 (468)
..+|.......|.+.|+ +|+|||+||++++...|.. +.+.| ..+|.|+++|+||+|.| ++++
T Consensus 10 ~~~g~~l~~~~~~~~~~----~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~ 85 (207)
T 3bdi_A 10 DVNGTRVFQRKMVTDSN----RRSIALFHGYSFTSMDWDKADLFNNYSKIGYNVYAPDYPGFGRSASSEKYGIDRGDLKH 85 (207)
T ss_dssp EETTEEEEEEEECCTTC----CEEEEEECCTTCCGGGGGGGTHHHHHHTTTEEEEEECCTTSTTSCCCTTTCCTTCCHHH
T ss_pred eeCCcEEEEEEEeccCC----CCeEEEECCCCCCccccchHHHHHHHHhCCCeEEEEcCCcccccCcccCCCCCcchHHH
Confidence 34555532222555553 7899999999999999999 99999 45699999999999998 6788
Q ss_pred HHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHH
Q 012190 224 LVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVP 303 (468)
Q Consensus 224 ~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (468)
+++++..+++.+ +.++++++|||+||.+++.+|.++|++++++|+++|..... .
T Consensus 86 ~~~~~~~~~~~~----~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~---------~------------- 139 (207)
T 3bdi_A 86 AAEFIRDYLKAN----GVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPAWVES---------L------------- 139 (207)
T ss_dssp HHHHHHHHHHHT----TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCGG---------G-------------
T ss_pred HHHHHHHHHHHc----CCCceEEEEECccHHHHHHHHHhCchhheEEEEeCCccccc---------h-------------
Confidence 888888888874 45699999999999999999999999999999999852100 0
Q ss_pred HHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEE
Q 012190 304 YLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVL 383 (468)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvL 383 (468)
...+.++++|++
T Consensus 140 --------------------------------------------------------------------~~~~~~~~~p~l 151 (207)
T 3bdi_A 140 --------------------------------------------------------------------KGDMKKIRQKTL 151 (207)
T ss_dssp --------------------------------------------------------------------HHHHTTCCSCEE
T ss_pred --------------------------------------------------------------------hHHHhhccCCEE
Confidence 012356789999
Q ss_pred EEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 384 VLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 384 lI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
+++|++|.+++++ ..+.+.+.++++++++++++||..+.+.++++.+.|. .|++
T Consensus 152 ~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~--~fl~ 205 (207)
T 3bdi_A 152 LVWGSKDHVVPIA-LSKEYASIISGSRLEIVEGSGHPVYIEKPEEFVRITV--DFLR 205 (207)
T ss_dssp EEEETTCTTTTHH-HHHHHHHHSTTCEEEEETTCCSCHHHHSHHHHHHHHH--HHHH
T ss_pred EEEECCCCccchH-HHHHHHHhcCCceEEEeCCCCCCccccCHHHHHHHHH--HHHh
Confidence 9999999999999 7999999999999999999999999999999999998 4554
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A | Back alignment and structure |
|---|
Probab=99.85 E-value=2.1e-26 Score=220.22 Aligned_cols=264 Identities=16% Similarity=0.051 Sum_probs=155.5
Q ss_pred CCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCC------------hHHHH
Q 012190 158 KPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP------------FEGLV 225 (468)
Q Consensus 158 ~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss------------~~~~~ 225 (468)
..+|.. ++|...|+ +|+|||+||++++...|..+++.|.++|+|+++|+||||.|+ +++++
T Consensus 11 ~~~g~~---~~~~~~g~----~p~vv~lHG~~~~~~~~~~~~~~l~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~ 83 (304)
T 3b12_A 11 DVGDVT---INCVVGGS----GPALLLLHGFPQNLHMWARVAPLLANEYTVVCADLRGYGGSSKPVGAPDHANYSFRAMA 83 (304)
Confidence 345555 45666664 788999999999999999999999989999999999999873 45778
Q ss_pred HHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHH-
Q 012190 226 KFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPY- 304 (468)
Q Consensus 226 ~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 304 (468)
+++.++++.+ ..++++|+||||||.+|+.+|.++|++|+++|+++|.................. ........+.
T Consensus 84 ~~l~~~l~~l----~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 158 (304)
T 3b12_A 84 SDQRELMRTL----GFERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPTYVMFEEVDRFVARAY-WHWYFLQQPAP 158 (304)
Confidence 8888888874 345899999999999999999999999999999998654322111000000000 0000000000
Q ss_pred HhhhhcC-ChhhHHHHhhccCC--ChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHH--hHHHhhhcccCC
Q 012190 305 LLSYVMG-DPIKMAMVNIENRL--PPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSA--SAYANSRLHAVK 379 (468)
Q Consensus 305 ~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~l~~i~ 379 (468)
....+.. .+..+......... ......++....+..... .................. .......+.+++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 232 (304)
T 3b12_A 159 YPEKVIGADPDTFYEGCLFGWGATGADGFDPEQLEEYRKQWR------DPAAIHGSCCDYRAGGTIDFELDHGDLGRQVQ 232 (304)
Confidence 0000000 00000000000000 000000000000000000 000000000000000000 000011267899
Q ss_pred ceEEEEEeCCCCCC-CcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccccC
Q 012190 380 AEVLVLASGKDNML-PSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSR 443 (468)
Q Consensus 380 ~PvLlI~G~~D~~v-~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r~~ 443 (468)
+|+|+|+|++|..+ +.. ..+.+.+..++++++++ ++||++++|+|+++++.|. +|+++..
T Consensus 233 ~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~i-~~gH~~~~e~p~~~~~~i~--~fl~~~~ 293 (304)
T 3b12_A 233 CPALVFSGSAGLMHSLFE-MQVVWAPRLANMRFASL-PGGHFFVDRFPDDTARILR--EFLSDAR 293 (304)
Confidence 99999999999655 455 57777888889999999 9999999999999999999 6776643
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} | Back alignment and structure |
|---|
Probab=99.91 E-value=7.6e-24 Score=198.91 Aligned_cols=214 Identities=15% Similarity=0.123 Sum_probs=145.8
Q ss_pred CCCeEEEeCCCCCchhhH--HHhHhhh-cCCeEEEEecCCCCCCC-------ChHHHHHHHHHHHHHHhhcCCCCcEEEE
Q 012190 178 GSPTLLFLPGIDGLGLGL--ILHHKPL-GKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHASSPEKPIYLV 247 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~--~~~~~~L-~~~~~V~~~D~~G~G~S-------s~~~~~~dl~~~i~~~~~~~~~~~i~Lv 247 (468)
++|+|||+||++++...| ..+...| ..+|+|+++|+||||.| +++++++++.++++.+. .++++|+
T Consensus 36 ~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~~~~l~----~~~~~l~ 111 (270)
T 3llc_A 36 ERPTCIWLGGYRSDMTGTKALEMDDLAASLGVGAIRFDYSGHGASGGAFRDGTISRWLEEALAVLDHFK----PEKAILV 111 (270)
T ss_dssp TSCEEEEECCTTCCTTSHHHHHHHHHHHHHTCEEEEECCTTSTTCCSCGGGCCHHHHHHHHHHHHHHHC----CSEEEEE
T ss_pred CCCeEEEECCCccccccchHHHHHHHHHhCCCcEEEeccccCCCCCCccccccHHHHHHHHHHHHHHhc----cCCeEEE
Confidence 478999999999996654 3466777 67899999999999988 47899999999999864 5599999
Q ss_pred EeChhHHHHHHHHHh---CC---CCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhh
Q 012190 248 GDSFGGCLALAVAAR---NP---TIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNI 321 (468)
Q Consensus 248 GhS~GG~ia~~~a~~---~P---~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (468)
||||||.+|+.+|.+ +| ++++++|+++|......... ...+.......+. ...
T Consensus 112 G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~il~~~~~~~~~~~~------~~~~~~~~~~~~~---~~~------------ 170 (270)
T 3llc_A 112 GSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAPDFTSDLI------EPLLGDRERAELA---ENG------------ 170 (270)
T ss_dssp EETHHHHHHHHHHHHHHTCSCCSCEEEEEEEESCCTTHHHHTT------GGGCCHHHHHHHH---HHS------------
T ss_pred EeChHHHHHHHHHHHHHhccccccccceeEEecCcccchhhhh------hhhhhhhhhhhhh---ccC------------
Confidence 999999999999999 99 99999999998653211100 0000100000000 000
Q ss_pred ccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHH
Q 012190 322 ENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKR 401 (468)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~ 401 (468)
..... ... ...+............. ......+..+++|+|+++|++|.+++.+ ..+.
T Consensus 171 ------------~~~~~-------~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~l~i~g~~D~~v~~~-~~~~ 227 (270)
T 3llc_A 171 ------------YFEEV-------SEY-SPEPNIFTRALMEDGRA--NRVMAGMIDTGCPVHILQGMADPDVPYQ-HALK 227 (270)
T ss_dssp ------------EEEEC-------CTT-CSSCEEEEHHHHHHHHH--TCCTTSCCCCCSCEEEEEETTCSSSCHH-HHHH
T ss_pred ------------cccCh-------hhc-ccchhHHHHHHHhhhhh--hhhhhhhhcCCCCEEEEecCCCCCCCHH-HHHH
Confidence 00000 000 00000000000011100 1113456788999999999999999999 7999
Q ss_pred HHHhCCC--cEEEEeCCCCcccc-ccCcHHHHHHHHhcCcccc
Q 012190 402 LNNSLQN--CIVRNFKDNGHTLL-LEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 402 l~~~l~~--~~~~~i~~aGH~~~-~e~p~~~~~~I~~~~F~~r 441 (468)
+.+.+++ +++++++++||++. .+.++++.+.|. .|+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~--~fl~~ 268 (270)
T 3llc_A 228 LVEHLPADDVVLTLVRDGDHRLSRPQDIDRMRNAIR--AMIEP 268 (270)
T ss_dssp HHHTSCSSSEEEEEETTCCSSCCSHHHHHHHHHHHH--HHHC-
T ss_pred HHHhcCCCCeeEEEeCCCcccccccccHHHHHHHHH--HHhcC
Confidence 9999987 99999999999655 477888998888 56654
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.6e-23 Score=195.41 Aligned_cols=257 Identities=11% Similarity=0.076 Sum_probs=157.2
Q ss_pred ccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCC---CchhhHH-HhHhhhcCCeEEEEecCCCCCCCChHHHHHHHHHH
Q 012190 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGID---GLGLGLI-LHHKPLGKAFEVRCLHIPVYDRTPFEGLVKFVEET 231 (468)
Q Consensus 156 ~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~---~s~~~~~-~~~~~L~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~ 231 (468)
+...||.......+.+.+. .+.|+|||+||++ ++...|. .+.+.|.+.|.|+++|+||+|.++.....+|+.++
T Consensus 8 ~~~~dg~~l~~~~~~p~~~--~~~~~vv~~HG~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~~~~~~~~~~~~~d~~~~ 85 (275)
T 3h04_A 8 VITKDAFALPYTIIKAKNQ--PTKGVIVYIHGGGLMFGKANDLSPQYIDILTEHYDLIQLSYRLLPEVSLDCIIEDVYAS 85 (275)
T ss_dssp EECTTSCEEEEEEECCSSS--SCSEEEEEECCSTTTSCCTTCSCHHHHHHHTTTEEEEEECCCCTTTSCHHHHHHHHHHH
T ss_pred EecCCcEEEEEEEEccCCC--CCCCEEEEEECCcccCCchhhhHHHHHHHHHhCceEEeeccccCCccccchhHHHHHHH
Confidence 4556666644444444432 2478999999998 6666554 67778866699999999999999999999999999
Q ss_pred HHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcC
Q 012190 232 VRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMG 311 (468)
Q Consensus 232 i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (468)
++.+....+.++++|+||||||.+|+.+|.+ ++++++|+++|...................+.. ........+..
T Consensus 86 ~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~--~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 160 (275)
T 3h04_A 86 FDAIQSQYSNCPIFTFGRSSGAYLSLLIARD--RDIDGVIDFYGYSRINTEPFKTTNSYYAKIAQS---INETMIAQLTS 160 (275)
T ss_dssp HHHHHHTTTTSCEEEEEETHHHHHHHHHHHH--SCCSEEEEESCCSCSCSHHHHSCCHHHHHHHTT---SCHHHHHTTSC
T ss_pred HHHHHhhCCCCCEEEEEecHHHHHHHHHhcc--CCccEEEeccccccccccccccccchhhccccc---chHHHHhcccC
Confidence 9888877777899999999999999999999 789999999997654322111000000000000 00000000000
Q ss_pred ChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCC
Q 012190 312 DPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDN 391 (468)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~ 391 (468)
.... ....... .................+.. ....... . ......+..++ |+|+++|++|.
T Consensus 161 ~~~~------~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~--------~-~~~~~~~~~~~-P~lii~G~~D~ 221 (275)
T 3h04_A 161 PTPV------VQDQIAQ--RFLIYVYARGTGKWINMINI-ADYTDSK--------Y-NIAPDELKTLP-PVFIAHCNGDY 221 (275)
T ss_dssp SSCC------SSCSSGG--GHHHHHHHHHHTCHHHHHCC-SCTTSGG--------G-SCCHHHHTTCC-CEEEEEETTCS
T ss_pred CCCc------CCCcccc--chhhhhhhhhcCchHHhhcc-ccccccc--------c-ccccchhccCC-CEEEEecCCCC
Confidence 0000 0000000 00000000000000000000 0000000 0 00012235667 99999999999
Q ss_pred CCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCc---HHHHHHHHhcCcccc
Q 012190 392 MLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEG---ISLLTIIKGTCKYRR 441 (468)
Q Consensus 392 ~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p---~~~~~~I~~~~F~~r 441 (468)
++|++ ..+.+.+.++++++++++++||.++.+.+ +++.+.+. +|+++
T Consensus 222 ~~~~~-~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~i~--~fl~~ 271 (275)
T 3h04_A 222 DVPVE-ESEHIMNHVPHSTFERVNKNEHDFDRRPNDEAITIYRKVV--DFLNA 271 (275)
T ss_dssp SSCTH-HHHHHHTTCSSEEEEEECSSCSCTTSSCCHHHHHHHHHHH--HHHHH
T ss_pred CCChH-HHHHHHHhcCCceEEEeCCCCCCcccCCchhHHHHHHHHH--HHHHH
Confidence 99999 79999999999999999999999999999 57777777 45543
|
| >3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-23 Score=211.22 Aligned_cols=136 Identities=10% Similarity=0.098 Sum_probs=102.9
Q ss_pred hHHHHhhcCCCcchHHHHHHhccCcc-CCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcC------
Q 012190 132 ELEVLWDDGYGTDSVKDYLDAAKEII-KPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGK------ 204 (468)
Q Consensus 132 ~~~~~~~~~~~~~~~~~y~~~~~~~~-~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~------ 204 (468)
.+-..|.++|.....+..+.....+. ..+|.. ++|...+++.+++++|||+||++++...|..+++.|.+
T Consensus 64 ~l~~~w~~~~dwr~~e~~ln~~~~~~~~i~g~~---i~~~~~~~~~~~~~pllllHG~~~s~~~~~~~~~~L~~~~~~~~ 140 (408)
T 3g02_A 64 TMREKWLSEFDWRPFEARLNSFPQFTTEIEGLT---IHFAALFSEREDAVPIALLHGWPGSFVEFYPILQLFREEYTPET 140 (408)
T ss_dssp HHHHHHHHTCCHHHHHHHHTTSCEEEEEETTEE---EEEEEECCSCTTCEEEEEECCSSCCGGGGHHHHHHHHHHCCTTT
T ss_pred HHHHHHhhhcChHHHHHHHhcCCCEEEEECCEE---EEEEEecCCCCCCCeEEEECCCCCcHHHHHHHHHHHhccccccc
Confidence 46667888887655555554433332 335555 45554444334678999999999999999999999943
Q ss_pred -CeEEEEecCCCCCCC---------ChHHHHHHHHHHHHHHhhcCCCC-cEEEEEeChhHHHHHHHHHhCCCCceEEEEe
Q 012190 205 -AFEVRCLHIPVYDRT---------PFEGLVKFVEETVRREHASSPEK-PIYLVGDSFGGCLALAVAARNPTIDLILILS 273 (468)
Q Consensus 205 -~~~V~~~D~~G~G~S---------s~~~~~~dl~~~i~~~~~~~~~~-~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli 273 (468)
+|+|+++|+||||.| +++++++++.++++. ++.+ +++++||||||.+++.+|.++|+.+ ++++.
T Consensus 141 ~gf~vv~~DlpG~G~S~~~~~~~~~~~~~~a~~~~~l~~~----lg~~~~~~lvG~S~Gg~ia~~~A~~~p~~~-~~~l~ 215 (408)
T 3g02_A 141 LPFHLVVPSLPGYTFSSGPPLDKDFGLMDNARVVDQLMKD----LGFGSGYIIQGGDIGSFVGRLLGVGFDACK-AVHLN 215 (408)
T ss_dssp CCEEEEEECCTTSTTSCCSCSSSCCCHHHHHHHHHHHHHH----TTCTTCEEEEECTHHHHHHHHHHHHCTTEE-EEEES
T ss_pred CceEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----hCCCCCEEEeCCCchHHHHHHHHHhCCCce-EEEEe
Confidence 689999999999988 368899999999988 4444 8999999999999999999997644 55554
Q ss_pred CC
Q 012190 274 NP 275 (468)
Q Consensus 274 ~p 275 (468)
.+
T Consensus 216 ~~ 217 (408)
T 3g02_A 216 FC 217 (408)
T ss_dssp CC
T ss_pred CC
Confidence 43
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-23 Score=200.62 Aligned_cols=214 Identities=15% Similarity=0.112 Sum_probs=142.9
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC-------ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeCh
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHASSPEKPIYLVGDSF 251 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-------s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~ 251 (468)
+|+|||+||++++...|..+++.|.++|+|+++|+||||.| +++++++++.++++.+. +.++++|+||||
T Consensus 51 ~~~lvllHG~~~~~~~~~~l~~~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~~~---~~~~~~lvG~S~ 127 (280)
T 3qmv_A 51 PLRLVCFPYAGGTVSAFRGWQERLGDEVAVVPVQLPGRGLRLRERPYDTMEPLAEAVADALEEHR---LTHDYALFGHSM 127 (280)
T ss_dssp SEEEEEECCTTCCGGGGTTHHHHHCTTEEEEECCCTTSGGGTTSCCCCSHHHHHHHHHHHHHHTT---CSSSEEEEEETH
T ss_pred CceEEEECCCCCChHHHHHHHHhcCCCceEEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC---CCCCEEEEEeCH
Confidence 47899999999999999999999988999999999999987 58999999999998842 456999999999
Q ss_pred hHHHHHHHHHhCCCCce----EEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCCh
Q 012190 252 GGCLALAVAARNPTIDL----ILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPP 327 (468)
Q Consensus 252 GG~ia~~~a~~~P~~v~----~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (468)
||.+|+.+|.++|+++. +++++++.......... . ..... ..+...+......+... ..
T Consensus 128 Gg~va~~~a~~~p~~~~~~~~~l~l~~~~~p~~~~~~~-~----~~~~~---~~~~~~~~~~~~~~~~~--------~~- 190 (280)
T 3qmv_A 128 GALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRA-D----HTLSD---TALREVIRDLGGLDDAD--------TL- 190 (280)
T ss_dssp HHHHHHHHHHHHHHTTCCCCSCEEEESCCCGGGCSCCC-G----GGSCH---HHHHHHHHHHTCCC--------------
T ss_pred hHHHHHHHHHHHHHcCCCCceEEEEECCCCCCCcCccc-c----cccCH---HHHHHHHHHhCCCChhh--------hc-
Confidence 99999999999998877 88887764422111100 0 00000 00000000010000000 00
Q ss_pred hHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC
Q 012190 328 RIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ 407 (468)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~ 407 (468)
...+... ....+.. .+.....+....+..+++|+|+|+|++|.+++++ ..+.+.+.++
T Consensus 191 ---~~~~~~~---------------~~~~~~~---~~~~~~~~~~~~~~~i~~P~l~i~G~~D~~~~~~-~~~~~~~~~~ 248 (280)
T 3qmv_A 191 ---GAAYFDR---------------RLPVLRA---DLRACERYDWHPRPPLDCPTTAFSAAADPIATPE-MVEAWRPYTT 248 (280)
T ss_dssp -------CCT---------------THHHHHH---HHHHHHTCCCCCCCCBCSCEEEEEEEECSSSCHH-HHHTTGGGBS
T ss_pred ---CHHHHHH---------------HHHHHHH---HHHHHHhccccCCCceecCeEEEEecCCCCcChH-HHHHHHHhcC
Confidence 0000000 0000000 0111111111234688999999999999999998 6888888888
Q ss_pred C-cEEEEeCCCCccccc--cCcHHHHHHHHh
Q 012190 408 N-CIVRNFKDNGHTLLL--EEGISLLTIIKG 435 (468)
Q Consensus 408 ~-~~~~~i~~aGH~~~~--e~p~~~~~~I~~ 435 (468)
+ .++++++ +||+.++ ++|+++++.|.+
T Consensus 249 ~~~~~~~~~-ggH~~~~~~~~~~~~~~~i~~ 278 (280)
T 3qmv_A 249 GSFLRRHLP-GNHFFLNGGPSRDRLLAHLGT 278 (280)
T ss_dssp SCEEEEEEE-EETTGGGSSHHHHHHHHHHHT
T ss_pred CceEEEEec-CCCeEEcCchhHHHHHHHHHh
Confidence 6 4677777 5999999 999999999984
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 | Back alignment and structure |
|---|
Probab=99.89 E-value=2.5e-23 Score=188.74 Aligned_cols=185 Identities=16% Similarity=0.156 Sum_probs=147.1
Q ss_pred cCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHH--hHhhh-cCCeEEEEecCCCCCCCC-------hHHHH-
Q 012190 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLIL--HHKPL-GKAFEVRCLHIPVYDRTP-------FEGLV- 225 (468)
Q Consensus 157 ~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~--~~~~L-~~~~~V~~~D~~G~G~Ss-------~~~~~- 225 (468)
+..+|....+..+.+.+. +++|+|||+||++++...|.. +.+.| ..+|.|+++|+||+|.|+ +++++
T Consensus 12 ~~~~g~~l~~~~~~p~~~--~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~ 89 (210)
T 1imj_A 12 IQVQGQALFFREALPGSG--QARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAPAPIGELAP 89 (210)
T ss_dssp EEETTEEECEEEEECSSS--CCSCEEEECCCTTCCHHHHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCCSSCTTSCCC
T ss_pred EeeCCeEEEEEEeCCCCC--CCCceEEEECCCCCccceeecchhHHHHHHCCCeEEEecCCCCCCCCCCCCcchhhhcch
Confidence 344555544433333322 257899999999999999998 58888 557999999999999873 55555
Q ss_pred -HHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHH
Q 012190 226 -KFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPY 304 (468)
Q Consensus 226 -~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (468)
+++.++++.+. .++++++|||+||.+++.+|.++|++++++|+++|.....
T Consensus 90 ~~~~~~~~~~~~----~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~------------------------ 141 (210)
T 1imj_A 90 GSFLAAVVDALE----LGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDK------------------------ 141 (210)
T ss_dssp THHHHHHHHHHT----CCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGG------------------------
T ss_pred HHHHHHHHHHhC----CCCeEEEEECchHHHHHHHHHhCccccceEEEeCCCcccc------------------------
Confidence 88888888854 4589999999999999999999999999999998853100
Q ss_pred HhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEE
Q 012190 305 LLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLV 384 (468)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLl 384 (468)
.. ...+..+++|+++
T Consensus 142 -----------------------------------------------~~------------------~~~~~~~~~p~l~ 156 (210)
T 1imj_A 142 -----------------------------------------------IN------------------AANYASVKTPALI 156 (210)
T ss_dssp -----------------------------------------------SC------------------HHHHHTCCSCEEE
T ss_pred -----------------------------------------------cc------------------chhhhhCCCCEEE
Confidence 00 0123567899999
Q ss_pred EEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 385 LASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 385 I~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
++|++|. ++.+ ..+.+ +.+++++++.++++||+++.++|+++.+.|. .|+++
T Consensus 157 i~g~~D~-~~~~-~~~~~-~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~--~fl~~ 208 (210)
T 1imj_A 157 VYGDQDP-MGQT-SFEHL-KQLPNHRVLIMKGAGHPCYLDKPEEWHTGLL--DFLQG 208 (210)
T ss_dssp EEETTCH-HHHH-HHHHH-TTSSSEEEEEETTCCTTHHHHCHHHHHHHHH--HHHHT
T ss_pred EEcCccc-CCHH-HHHHH-hhCCCCCEEEecCCCcchhhcCHHHHHHHHH--HHHHh
Confidence 9999999 9988 68888 8889999999999999999999999999998 55543
|
| >2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.4e-22 Score=197.14 Aligned_cols=100 Identities=11% Similarity=-0.004 Sum_probs=86.5
Q ss_pred CCCeEEEeCCCCCchh---hHHHhHhhhcCCeEEEEec----CCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeC
Q 012190 178 GSPTLLFLPGIDGLGL---GLILHHKPLGKAFEVRCLH----IPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~---~~~~~~~~L~~~~~V~~~D----~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS 250 (468)
++|+|||+||++++.. .|..+++.|+.+|+|+++| +||||.|+..+.++|+.++++.+....+.++++|+|||
T Consensus 37 ~~~~vvllHG~~~~~~~~~~~~~l~~~L~~g~~Vi~~Dl~~D~~G~G~S~~~~~~~d~~~~~~~l~~~l~~~~~~LvGhS 116 (335)
T 2q0x_A 37 ARRCVLWVGGQTESLLSFDYFTNLAEELQGDWAFVQVEVPSGKIGSGPQDHAHDAEDVDDLIGILLRDHCMNEVALFATS 116 (335)
T ss_dssp SSSEEEEECCTTCCTTCSTTHHHHHHHHTTTCEEEEECCGGGBTTSCSCCHHHHHHHHHHHHHHHHHHSCCCCEEEEEEG
T ss_pred CCcEEEEECCCCccccchhHHHHHHHHHHCCcEEEEEeccCCCCCCCCccccCcHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 4689999999987544 4678888898899999995 59999999988889999888877655667799999999
Q ss_pred hhHHHHHHHHH--hCCCCceEEEEeCCCC
Q 012190 251 FGGCLALAVAA--RNPTIDLILILSNPAT 277 (468)
Q Consensus 251 ~GG~ia~~~a~--~~P~~v~~lVli~p~~ 277 (468)
|||.+|+.+|. .+|++|+++|+++|..
T Consensus 117 mGG~iAl~~A~~~~~p~rV~~lVL~~~~~ 145 (335)
T 2q0x_A 117 TGTQLVFELLENSAHKSSITRVILHGVVC 145 (335)
T ss_dssp GGHHHHHHHHHHCTTGGGEEEEEEEEECC
T ss_pred HhHHHHHHHHHhccchhceeEEEEECCcc
Confidence 99999999999 5799999999998864
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-22 Score=182.69 Aligned_cols=180 Identities=18% Similarity=0.187 Sum_probs=133.3
Q ss_pred CCCeEEEeCCCCCc---hhhHHH-hHhhhcC--CeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeCh
Q 012190 178 GSPTLLFLPGIDGL---GLGLIL-HHKPLGK--AFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSF 251 (468)
Q Consensus 178 ~~p~lV~lHG~~~s---~~~~~~-~~~~L~~--~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~ 251 (468)
+.|+|||+||++++ ...|.. +.+.|.+ +|+|+++|+||++..+ ..+++..+++.+.. .++++|+||||
T Consensus 3 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~d~~g~~~~~---~~~~~~~~~~~l~~---~~~~~lvG~S~ 76 (194)
T 2qs9_A 3 SPSKAVIVPGNGGGDVTTHGWYGWVKKELEKIPGFQCLAKNMPDPITAR---ESIWLPFMETELHC---DEKTIIIGHSS 76 (194)
T ss_dssp CCCEEEEECCSSSSCTTTSTTHHHHHHHHTTSTTCCEEECCCSSTTTCC---HHHHHHHHHHTSCC---CTTEEEEEETH
T ss_pred CCCEEEEECCCCCCCcccchHHHHHHHHHhhccCceEEEeeCCCCCccc---HHHHHHHHHHHhCc---CCCEEEEEcCc
Confidence 47899999999999 456766 7888866 8999999999986544 45556666665321 26899999999
Q ss_pred hHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHh
Q 012190 252 GGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKL 331 (468)
Q Consensus 252 GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (468)
||.+++.+|.++| ++++|+++|....... . .. . .
T Consensus 77 Gg~ia~~~a~~~p--v~~lvl~~~~~~~~~~----~---~~-----------~--------------------------~ 110 (194)
T 2qs9_A 77 GAIAAMRYAETHR--VYAIVLVSAYTSDLGD----E---NE-----------R--------------------------A 110 (194)
T ss_dssp HHHHHHHHHHHSC--CSEEEEESCCSSCTTC----H---HH-----------H--------------------------H
T ss_pred HHHHHHHHHHhCC--CCEEEEEcCCccccch----h---hh-----------H--------------------------H
Confidence 9999999999998 9999999986532100 0 00 0 0
Q ss_pred hhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEE
Q 012190 332 EQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIV 411 (468)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~ 411 (468)
..+... + .. + ..+..+.+|+++++|++|.++|++ ..+.+.+.+ ++++
T Consensus 111 ~~~~~~---------------~-~~--~-------------~~~~~~~~p~lii~G~~D~~vp~~-~~~~~~~~~-~~~~ 157 (194)
T 2qs9_A 111 SGYFTR---------------P-WQ--W-------------EKIKANCPYIVQFGSTDDPFLPWK-EQQEVADRL-ETKL 157 (194)
T ss_dssp TSTTSS---------------C-CC--H-------------HHHHHHCSEEEEEEETTCSSSCHH-HHHHHHHHH-TCEE
T ss_pred Hhhhcc---------------c-cc--H-------------HHHHhhCCCEEEEEeCCCCcCCHH-HHHHHHHhc-CCeE
Confidence 000000 0 00 0 112334679999999999999999 799999888 8999
Q ss_pred EEeCCCCccccccCcHHHHHHHHhcCcccccCCC
Q 012190 412 RNFKDNGHTLLLEEGISLLTIIKGTCKYRRSRKL 445 (468)
Q Consensus 412 ~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r~~~~ 445 (468)
++++++||+++.|+|+.+++++. |+.+....
T Consensus 158 ~~~~~~gH~~~~~~p~~~~~~~~---fl~~~~~~ 188 (194)
T 2qs9_A 158 HKFTDCGHFQNTEFHELITVVKS---LLKVPALE 188 (194)
T ss_dssp EEESSCTTSCSSCCHHHHHHHHH---HHTCCCCC
T ss_pred EEeCCCCCccchhCHHHHHHHHH---HHHhhhhh
Confidence 99999999999999999988874 77665543
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 | Back alignment and structure |
|---|
Probab=99.89 E-value=6.4e-22 Score=182.24 Aligned_cols=185 Identities=17% Similarity=0.163 Sum_probs=142.5
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCCC------------------hHHHHHHHHHHHHHHhhc
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTP------------------FEGLVKFVEETVRREHAS 238 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss------------------~~~~~~dl~~~i~~~~~~ 238 (468)
++|+|||+||++++...|..+++.| ..+|.|+++|+||+|.|+ +++.++++.++++.+...
T Consensus 23 ~~~~vv~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 102 (238)
T 1ufo_A 23 PKALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERR 102 (238)
T ss_dssp CCEEEEEECCTTCCHHHHHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccEEEEECCCcccchHHHHHHHHHHhCCCEEEEecCCCCccCCCCCCcccccchhhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 3789999999999999999999999 457999999999999873 346778888888876543
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHH
Q 012190 239 SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAM 318 (468)
Q Consensus 239 ~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (468)
.. .+++++|||+||.+|+.+|.++|+.+.+++++++......... .. ..+
T Consensus 103 ~~-~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~----------------------- 152 (238)
T 1ufo_A 103 FG-LPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKLPQG--QV----VED----------------------- 152 (238)
T ss_dssp HC-CCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCCCCTT--CC----CCC-----------------------
T ss_pred cC-CcEEEEEEChHHHHHHHHHHhccCcceEEEEecCCccchhhhh--hc----cCC-----------------------
Confidence 22 6899999999999999999999999999999877542211100 00 000
Q ss_pred HhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccC-CceEEEEEeCCCCCCCcHH
Q 012190 319 VNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAV-KAEVLVLASGKDNMLPSED 397 (468)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i-~~PvLlI~G~~D~~v~~~~ 397 (468)
.. . ..+... .....+..+ ++|+++++|++|.+++.+
T Consensus 153 --------~~--~------------------------------~~~~~~--~~~~~~~~~~~~P~l~i~g~~D~~~~~~- 189 (238)
T 1ufo_A 153 --------PG--V------------------------------LALYQA--PPATRGEAYGGVPLLHLHGSRDHIVPLA- 189 (238)
T ss_dssp --------HH--H------------------------------HHHHHS--CGGGCGGGGTTCCEEEEEETTCTTTTHH-
T ss_pred --------cc--c------------------------------chhhcC--ChhhhhhhccCCcEEEEECCCCCccCcH-
Confidence 00 0 000000 011334566 899999999999999999
Q ss_pred HHHHHHHhCC------CcEEEEeCCCCccccccCcHHHHHHHHh
Q 012190 398 EAKRLNNSLQ------NCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (468)
Q Consensus 398 ~~~~l~~~l~------~~~~~~i~~aGH~~~~e~p~~~~~~I~~ 435 (468)
..+.+.+.++ ++++++++++||.++.+.++++.+.|.+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~l~~ 233 (238)
T 1ufo_A 190 RMEKTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLEH 233 (238)
T ss_dssp HHHHHHHHHGGGCTTCCEEEEEETTCCSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCCceEEEEeCCCCcccHHHHHHHHHHHHHH
Confidence 7999999888 8899999999999999999999988883
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.89 E-value=6.9e-22 Score=179.35 Aligned_cols=183 Identities=17% Similarity=0.143 Sum_probs=141.6
Q ss_pred ccCCCCCCceeeeecCCCCCCCCCCeEEEeCC-----CCCchhhHHHhHhhh-cCCeEEEEecCCCCCCCC-----hHHH
Q 012190 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPG-----IDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTP-----FEGL 224 (468)
Q Consensus 156 ~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG-----~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss-----~~~~ 224 (468)
+...+| ......+.+.+. .+.|+||++|| .......|..+.+.| ..+|.|+++|+||+|.|+ ....
T Consensus 11 ~~~~~g-~l~~~~~~p~~~--~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~ 87 (208)
T 3trd_A 11 IQGPVG-QLEVMITRPKGI--EKSVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRFNFRGVGKSQGRYDNGVGE 87 (208)
T ss_dssp EECSSS-EEEEEEECCSSC--CCSEEEEEECSCGGGTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCCCTTTHH
T ss_pred EECCCc-eEEEEEEcCCCC--CCCCEEEEEcCCCCCCCccCCchHHHHHHHHHHCCCEEEEEecCCCCCCCCCccchHHH
Confidence 445666 433333333322 24789999999 444455678888888 568999999999999884 3466
Q ss_pred HHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHH
Q 012190 225 VKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPY 304 (468)
Q Consensus 225 ~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (468)
.+|+.++++.+....+.++++++||||||.+++.+| .+| +++++|+++|.... +
T Consensus 88 ~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a-~~~-~v~~~v~~~~~~~~----------------------~-- 141 (208)
T 3trd_A 88 VEDLKAVLRWVEHHWSQDDIWLAGFSFGAYISAKVA-YDQ-KVAQLISVAPPVFY----------------------E-- 141 (208)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHH-HHS-CCSEEEEESCCTTS----------------------G--
T ss_pred HHHHHHHHHHHHHhCCCCeEEEEEeCHHHHHHHHHh-ccC-CccEEEEecccccc----------------------C--
Confidence 788888888877666678999999999999999999 777 89999999885400 0
Q ss_pred HhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEE
Q 012190 305 LLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLV 384 (468)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLl 384 (468)
. ...+..+++|+++
T Consensus 142 ------------------------------------------------~------------------~~~~~~~~~p~l~ 155 (208)
T 3trd_A 142 ------------------------------------------------G------------------FASLTQMASPWLI 155 (208)
T ss_dssp ------------------------------------------------G------------------GTTCCSCCSCEEE
T ss_pred ------------------------------------------------C------------------chhhhhcCCCEEE
Confidence 0 0123556899999
Q ss_pred EEeCCCCCCCcHHHHHHHHHhCCC-cEEEEeCCCCccccccCcHHHHHHHHh
Q 012190 385 LASGKDNMLPSEDEAKRLNNSLQN-CIVRNFKDNGHTLLLEEGISLLTIIKG 435 (468)
Q Consensus 385 I~G~~D~~v~~~~~~~~l~~~l~~-~~~~~i~~aGH~~~~e~p~~~~~~I~~ 435 (468)
++|++|.+++++ ..+.+.+.+++ +++++++++||++..+. +++.+.|.+
T Consensus 156 i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~H~~~~~~-~~~~~~i~~ 205 (208)
T 3trd_A 156 VQGDQDEVVPFE-QVKAFVNQISSPVEFVVMSGASHFFHGRL-IELRELLVR 205 (208)
T ss_dssp EEETTCSSSCHH-HHHHHHHHSSSCCEEEEETTCCSSCTTCH-HHHHHHHHH
T ss_pred EECCCCCCCCHH-HHHHHHHHccCceEEEEeCCCCCcccccH-HHHHHHHHH
Confidence 999999999999 79999999986 99999999999998775 888888873
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=3.1e-22 Score=188.57 Aligned_cols=186 Identities=13% Similarity=0.063 Sum_probs=143.6
Q ss_pred CCCeEEEeCCC---CCchhhHHHhHhhh-cCCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhH
Q 012190 178 GSPTLLFLPGI---DGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGG 253 (468)
Q Consensus 178 ~~p~lV~lHG~---~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG 253 (468)
+.|+|||+||. +++...|..+++.| ..+|.|+++|+||+|..+++++++|+.++++.+..... .+++|+||||||
T Consensus 62 ~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~~~~~~~~~~~~~d~~~~~~~l~~~~~-~~i~l~G~S~Gg 140 (262)
T 2pbl_A 62 PVGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPEVRISEITQQISQAVTAAAKEID-GPIVLAGHSAGG 140 (262)
T ss_dssp CSEEEEEECCSTTTSCCGGGCGGGGHHHHHTTEEEEEECCCCTTTSCHHHHHHHHHHHHHHHHHHSC-SCEEEEEETHHH
T ss_pred CCCEEEEEcCcccccCChHHHHHHHHHHHhCCCEEEEeCCCCCCCCChHHHHHHHHHHHHHHHHhcc-CCEEEEEECHHH
Confidence 57899999995 47888898999988 56899999999999999999999999999999876544 689999999999
Q ss_pred HHHHHHHHhC------CCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCCh
Q 012190 254 CLALAVAARN------PTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPP 327 (468)
Q Consensus 254 ~ia~~~a~~~------P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (468)
.+|+.+|.++ |++++++|+++|....... ... . .... + ....
T Consensus 141 ~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~~~~--------~~~---~----~~~~---~--------------~~~~ 188 (262)
T 2pbl_A 141 HLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPL--------LRT---S----MNEK---F--------------KMDA 188 (262)
T ss_dssp HHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGG--------GGS---T----THHH---H--------------CCCH
T ss_pred HHHHHHhccccccccccccceEEEEecCccCchHH--------Hhh---h----hhhh---h--------------CCCH
Confidence 9999999998 8999999999986532110 000 0 0000 0 0000
Q ss_pred hHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC
Q 012190 328 RIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ 407 (468)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~ 407 (468)
.... ... ....+..+++|+|+++|++|.+++.+ ..+.+.+.++
T Consensus 189 ----~~~~------------------------------~~~--~~~~~~~~~~P~lii~G~~D~~~~~~-~~~~~~~~~~ 231 (262)
T 2pbl_A 189 ----DAAI------------------------------AES--PVEMQNRYDAKVTVWVGGAERPAFLD-QAIWLVEAWD 231 (262)
T ss_dssp ----HHHH------------------------------HTC--GGGCCCCCSCEEEEEEETTSCHHHHH-HHHHHHHHHT
T ss_pred ----HHHH------------------------------hcC--cccccCCCCCCEEEEEeCCCCcccHH-HHHHHHHHhC
Confidence 0000 000 01234678999999999999999998 7999999998
Q ss_pred CcEEEEeCCCCccccccCcHHHHHHHH
Q 012190 408 NCIVRNFKDNGHTLLLEEGISLLTIIK 434 (468)
Q Consensus 408 ~~~~~~i~~aGH~~~~e~p~~~~~~I~ 434 (468)
+++++++++||+.++|++.+....+.
T Consensus 232 -~~~~~~~~~~H~~~~~~~~~~~~~l~ 257 (262)
T 2pbl_A 232 -ADHVIAFEKHHFNVIEPLADPESDLV 257 (262)
T ss_dssp -CEEEEETTCCTTTTTGGGGCTTCHHH
T ss_pred -CeEEEeCCCCcchHHhhcCCCCcHHH
Confidence 99999999999999998887766665
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 | Back alignment and structure |
|---|
Probab=99.88 E-value=6.8e-22 Score=177.13 Aligned_cols=174 Identities=18% Similarity=0.187 Sum_probs=135.5
Q ss_pred CCCeEEEeCCCCCchh-hHHHhHh-hh-cCCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHH
Q 012190 178 GSPTLLFLPGIDGLGL-GLILHHK-PL-GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGC 254 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~-~~~~~~~-~L-~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ 254 (468)
+.|+|||+||++++.. .|...+. .| .++|+|+++|+|..+..+++++++++.++++. . .++++|+||||||.
T Consensus 3 g~p~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~l~G~S~Gg~ 77 (192)
T 1uxo_A 3 GTKQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMPNPLQPRLEDWLDTLSLYQHT----L-HENTYLVAHSLGCP 77 (192)
T ss_dssp -CCEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCSCTTSCCHHHHHHHHHTTGGG----C-CTTEEEEEETTHHH
T ss_pred CCCEEEEEcCCCCCcchhHHHHHHHHHHhCCcEEEEecCCCCCCCCHHHHHHHHHHHHHh----c-cCCEEEEEeCccHH
Confidence 3567999999999998 7888775 68 78999999999966666889999999888876 3 46899999999999
Q ss_pred HHHHHHHhCCC--CceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhh
Q 012190 255 LALAVAARNPT--IDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLE 332 (468)
Q Consensus 255 ia~~~a~~~P~--~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (468)
+++.+|.++|+ +++++|+++|....... + + . ..
T Consensus 78 ~a~~~a~~~~~~~~v~~~v~~~~~~~~~~~-~----------~--------~--------------------------~~ 112 (192)
T 1uxo_A 78 AILRFLEHLQLRAALGGIILVSGFAKSLPT-L----------Q--------M--------------------------LD 112 (192)
T ss_dssp HHHHHHHTCCCSSCEEEEEEETCCSSCCTT-C----------G--------G--------------------------GG
T ss_pred HHHHHHHHhcccCCccEEEEeccCCCcccc-c----------h--------h--------------------------hh
Confidence 99999999999 99999999986533110 0 0 0 00
Q ss_pred hhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEE
Q 012190 333 QLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVR 412 (468)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~ 412 (468)
.+.. .+.+ ...+.++++|+++++|++|.++|++ ..+.+.+.+ +++++
T Consensus 113 ~~~~---------------~~~~----------------~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~-~~~~~ 159 (192)
T 1uxo_A 113 EFTQ---------------GSFD----------------HQKIIESAKHRAVIASKDDQIVPFS-FSKDLAQQI-DAALY 159 (192)
T ss_dssp GGTC---------------SCCC----------------HHHHHHHEEEEEEEEETTCSSSCHH-HHHHHHHHT-TCEEE
T ss_pred hhhh---------------cCCC----------------HHHHHhhcCCEEEEecCCCCcCCHH-HHHHHHHhc-CceEE
Confidence 0000 0000 0123556789999999999999999 789999999 99999
Q ss_pred EeCCCCccccccCcHHH---HHHHH
Q 012190 413 NFKDNGHTLLLEEGISL---LTIIK 434 (468)
Q Consensus 413 ~i~~aGH~~~~e~p~~~---~~~I~ 434 (468)
+++++||+.+.++++.+ .+.|.
T Consensus 160 ~~~~~gH~~~~~~~~~~~~~~~~l~ 184 (192)
T 1uxo_A 160 EVQHGGHFLEDEGFTSLPIVYDVLT 184 (192)
T ss_dssp EETTCTTSCGGGTCSCCHHHHHHHH
T ss_pred EeCCCcCcccccccccHHHHHHHHH
Confidence 99999999999988554 55555
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A | Back alignment and structure |
|---|
Probab=99.88 E-value=7.1e-22 Score=175.60 Aligned_cols=166 Identities=16% Similarity=0.138 Sum_probs=133.1
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhh-cCCe---EEEEecCCCCCCCC---hHHHHHHHHHHHHHHhhcCCCCcEEEEEeC
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAF---EVRCLHIPVYDRTP---FEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~---~V~~~D~~G~G~Ss---~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS 250 (468)
++|+|||+||++++...|..+.+.| ..+| +|+++|+||+|.|+ .+++++++.++++.+ +.++++|+|||
T Consensus 2 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~----~~~~~~lvG~S 77 (181)
T 1isp_A 2 EHNPVVMVHGIGGASFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNYNNGPVLSRFVQKVLDET----GAKKVDIVAHS 77 (181)
T ss_dssp CCCCEEEECCTTCCGGGGHHHHHHHHHTTCCGGGEEECCCSCTTCCHHHHHHHHHHHHHHHHHHH----CCSCEEEEEET
T ss_pred CCCeEEEECCcCCCHhHHHHHHHHHHHcCCCCccEEEEecCCCCCchhhhHHHHHHHHHHHHHHc----CCCeEEEEEEC
Confidence 4678999999999999999999999 5566 79999999999984 677788888888774 44589999999
Q ss_pred hhHHHHHHHHHhC--CCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChh
Q 012190 251 FGGCLALAVAARN--PTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPR 328 (468)
Q Consensus 251 ~GG~ia~~~a~~~--P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (468)
|||.+++.++.++ |++++++|+++|....... ..
T Consensus 78 ~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~~----------------------------------------~~---- 113 (181)
T 1isp_A 78 MGGANTLYYIKNLDGGNKVANVVTLGGANRLTTG----------------------------------------KA---- 113 (181)
T ss_dssp HHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCS----------------------------------------BC----
T ss_pred ccHHHHHHHHHhcCCCceEEEEEEEcCccccccc----------------------------------------cc----
Confidence 9999999999998 8999999999985422100 00
Q ss_pred HHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCC
Q 012190 329 IKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQN 408 (468)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~ 408 (468)
++. .....++|+++++|++|.++|++ .. .+++
T Consensus 114 -----------------------~~~-------------------~~~~~~~p~l~i~G~~D~~v~~~-~~-----~~~~ 145 (181)
T 1isp_A 114 -----------------------LPG-------------------TDPNQKILYTSIYSSADMIVMNY-LS-----RLDG 145 (181)
T ss_dssp -----------------------CCC-------------------SCTTCCCEEEEEEETTCSSSCHH-HH-----CCBT
T ss_pred -----------------------CCC-------------------CCCccCCcEEEEecCCCcccccc-cc-----cCCC
Confidence 000 00123579999999999999988 33 3788
Q ss_pred cEEEEeCCCCccccccCcHHHHHHHHhcCccccc
Q 012190 409 CIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRS 442 (468)
Q Consensus 409 ~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r~ 442 (468)
+++++++++||+.+.++| ++.+.|. +|+++.
T Consensus 146 ~~~~~~~~~gH~~~~~~~-~~~~~i~--~fl~~~ 176 (181)
T 1isp_A 146 ARNVQIHGVGHIGLLYSS-QVNSLIK--EGLNGG 176 (181)
T ss_dssp SEEEEESSCCTGGGGGCH-HHHHHHH--HHHTTT
T ss_pred CcceeeccCchHhhccCH-HHHHHHH--HHHhcc
Confidence 999999999999999997 7888888 566654
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 | Back alignment and structure |
|---|
Probab=99.87 E-value=7.2e-22 Score=186.24 Aligned_cols=183 Identities=14% Similarity=0.119 Sum_probs=142.6
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhh------cCCCCcEEEEEeC
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHA------SSPEKPIYLVGDS 250 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~------~~~~~~i~LvGhS 250 (468)
..|+|||+||++++...|..+++.| ..+|.|+++|+||+|.+.. ....++...++.+.. ....++++|+|||
T Consensus 53 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~-~~~~d~~~~~~~l~~~~~~~~~~~~~~i~l~G~S 131 (262)
T 1jfr_A 53 TFGAVVISPGFTAYQSSIAWLGPRLASQGFVVFTIDTNTTLDQPD-SRGRQLLSALDYLTQRSSVRTRVDATRLGVMGHS 131 (262)
T ss_dssp CEEEEEEECCTTCCGGGTTTHHHHHHTTTCEEEEECCSSTTCCHH-HHHHHHHHHHHHHHHTSTTGGGEEEEEEEEEEET
T ss_pred CCCEEEEeCCcCCCchhHHHHHHHHHhCCCEEEEeCCCCCCCCCc-hhHHHHHHHHHHHHhccccccccCcccEEEEEEC
Confidence 4689999999999999999999999 5689999999999998742 233444444444432 2334689999999
Q ss_pred hhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHH
Q 012190 251 FGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIK 330 (468)
Q Consensus 251 ~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (468)
|||.+++.+|.++|+ ++++|+++|...
T Consensus 132 ~Gg~~a~~~a~~~p~-v~~~v~~~p~~~---------------------------------------------------- 158 (262)
T 1jfr_A 132 MGGGGSLEAAKSRTS-LKAAIPLTGWNT---------------------------------------------------- 158 (262)
T ss_dssp HHHHHHHHHHHHCTT-CSEEEEESCCCS----------------------------------------------------
T ss_pred hhHHHHHHHHhcCcc-ceEEEeecccCc----------------------------------------------------
Confidence 999999999999988 999999887421
Q ss_pred hhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHH-HHHHHHhCCC-
Q 012190 331 LEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDE-AKRLNNSLQN- 408 (468)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~-~~~l~~~l~~- 408 (468)
...+..+++|+|+++|++|.+++.+ . .+.+.+.+++
T Consensus 159 -----------------------------------------~~~~~~~~~P~l~i~G~~D~~~~~~-~~~~~~~~~l~~~ 196 (262)
T 1jfr_A 159 -----------------------------------------DKTWPELRTPTLVVGADGDTVAPVA-THSKPFYESLPGS 196 (262)
T ss_dssp -----------------------------------------CCCCTTCCSCEEEEEETTCSSSCTT-TTHHHHHHHSCTT
T ss_pred -----------------------------------------cccccccCCCEEEEecCccccCCch-hhHHHHHHHhhcC
Confidence 0123567899999999999999998 7 8899888864
Q ss_pred --cEEEEeCCCCccccccCcHHHHHHHHhcCcccccC-CCCCCCCCCCCCHHH
Q 012190 409 --CIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSR-KLDSVADFLPPSRQE 458 (468)
Q Consensus 409 --~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r~~-~~~~v~~~~~~~~~~ 458 (468)
.++++++++||..+.+.++++.+.|.+ |+++.. .......|+.|++++
T Consensus 197 ~~~~~~~~~~~~H~~~~~~~~~~~~~i~~--fl~~~l~~~~~~~~~~~~~~~~ 247 (262)
T 1jfr_A 197 LDKAYLELRGASHFTPNTSDTTIAKYSIS--WLKRFIDSDTRYEQFLCPIPRP 247 (262)
T ss_dssp SCEEEEEETTCCTTGGGSCCHHHHHHHHH--HHHHHHSCCGGGGGGTSSCCCC
T ss_pred CCceEEEeCCCCcCCcccchHHHHHHHHH--HHHHHhcCchhccccccCCCcc
Confidence 499999999999999999999999995 443322 223445666666543
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.87 E-value=3e-21 Score=180.62 Aligned_cols=169 Identities=15% Similarity=0.181 Sum_probs=136.7
Q ss_pred CCCeEEEeCCCCCch-----hhHHHhHhhh-cCCeEEEEecCCCCCCCC------hHHHHHHHHHHHHHHhhcCCC-CcE
Q 012190 178 GSPTLLFLPGIDGLG-----LGLILHHKPL-GKAFEVRCLHIPVYDRTP------FEGLVKFVEETVRREHASSPE-KPI 244 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~-----~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss------~~~~~~dl~~~i~~~~~~~~~-~~i 244 (468)
+.|+||++||+++.. ..|..+++.| ..+|.|+++|+||+|.|+ .+++ +|+.++++.+...... .++
T Consensus 46 ~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~-~d~~~~i~~l~~~~~~~~~i 124 (249)
T 2i3d_A 46 SAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEFDHGAGEL-SDAASALDWVQSLHPDSKSC 124 (249)
T ss_dssp TCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCCCSSHHHH-HHHHHHHHHHHHHCTTCCCE
T ss_pred CCCEEEEECCCcccCCCccchHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCccchH-HHHHHHHHHHHHhCCCCCeE
Confidence 578999999984322 3457788888 668999999999999884 3444 8888888887755433 489
Q ss_pred EEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccC
Q 012190 245 YLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENR 324 (468)
Q Consensus 245 ~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (468)
+++||||||.+++.+|.++|+ ++++|+++|......
T Consensus 125 ~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~------------------------------------------- 160 (249)
T 2i3d_A 125 WVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTYD------------------------------------------- 160 (249)
T ss_dssp EEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTSC-------------------------------------------
T ss_pred EEEEECHHHHHHHHHHhcCCC-ccEEEEEcCchhhhh-------------------------------------------
Confidence 999999999999999999998 999999998542100
Q ss_pred CChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHH
Q 012190 325 LPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNN 404 (468)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~ 404 (468)
...+..+++|+|+++|++|.+++.+ ..+.+.+
T Consensus 161 -----------------------------------------------~~~~~~~~~P~lii~G~~D~~~~~~-~~~~~~~ 192 (249)
T 2i3d_A 161 -----------------------------------------------FSFLAPCPSSGLIINGDADKVAPEK-DVNGLVE 192 (249)
T ss_dssp -----------------------------------------------CTTCTTCCSCEEEEEETTCSSSCHH-HHHHHHH
T ss_pred -----------------------------------------------hhhhcccCCCEEEEEcCCCCCCCHH-HHHHHHH
Confidence 0123567899999999999999999 7899998
Q ss_pred hCC-----CcEEEEeCCCCccccccCcHHHHHHHHhcCccccc
Q 012190 405 SLQ-----NCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRS 442 (468)
Q Consensus 405 ~l~-----~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r~ 442 (468)
.++ ++++++++++||... +.++++.+.|. .|+++.
T Consensus 193 ~~~~~~~~~~~~~~~~g~~H~~~-~~~~~~~~~i~--~fl~~~ 232 (249)
T 2i3d_A 193 KLKTQKGILITHRTLPGANHFFN-GKVDELMGECE--DYLDRR 232 (249)
T ss_dssp HHTTSTTCCEEEEEETTCCTTCT-TCHHHHHHHHH--HHHHHH
T ss_pred HHhhccCCceeEEEECCCCcccc-cCHHHHHHHHH--HHHHHh
Confidence 887 789999999999998 89999999999 566553
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.87 E-value=9.8e-22 Score=173.28 Aligned_cols=162 Identities=17% Similarity=0.219 Sum_probs=130.9
Q ss_pred CCCeEEEeCCCCCchhhHH--HhHhhh-cCCeEEEEecCCCCCCC-------ChHHHHHHHHHHHHHHhhcCCCCcEEEE
Q 012190 178 GSPTLLFLPGIDGLGLGLI--LHHKPL-GKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHASSPEKPIYLV 247 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~--~~~~~L-~~~~~V~~~D~~G~G~S-------s~~~~~~dl~~~i~~~~~~~~~~~i~Lv 247 (468)
++|+|||+||++++...|. .+.+.| ..+|.|+++|+||+|.| ++.+.++++.+.++... +.++++++
T Consensus 3 ~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~ 79 (176)
T 2qjw_A 3 SRGHCILAHGFESGPDALKVTALAEVAERLGWTHERPDFTDLDARRDLGQLGDVRGRLQRLLEIARAAT---EKGPVVLA 79 (176)
T ss_dssp SSCEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEECCCCHHHHTCGGGCTTCCHHHHHHHHHHHHHHHH---TTSCEEEE
T ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcC---CCCCEEEE
Confidence 4789999999999887554 788888 56899999999999986 35556666666666543 34689999
Q ss_pred EeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCCh
Q 012190 248 GDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPP 327 (468)
Q Consensus 248 GhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (468)
||||||.+++.+|.++| ++++|+++|.......
T Consensus 80 G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~~~--------------------------------------------- 112 (176)
T 2qjw_A 80 GSSLGSYIAAQVSLQVP--TRALFLMVPPTKMGPL--------------------------------------------- 112 (176)
T ss_dssp EETHHHHHHHHHHTTSC--CSEEEEESCCSCBTTB---------------------------------------------
T ss_pred EECHHHHHHHHHHHhcC--hhheEEECCcCCcccc---------------------------------------------
Confidence 99999999999999998 9999999986532100
Q ss_pred hHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC
Q 012190 328 RIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ 407 (468)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~ 407 (468)
. .+..+++|+++++|++|.++|++ ..+.+.+.+
T Consensus 113 -------------------------~--------------------~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~- 145 (176)
T 2qjw_A 113 -------------------------P--------------------ALDAAAVPISIVHAWHDELIPAA-DVIAWAQAR- 145 (176)
T ss_dssp -------------------------C--------------------CCCCCSSCEEEEEETTCSSSCHH-HHHHHHHHH-
T ss_pred -------------------------C--------------------cccccCCCEEEEEcCCCCccCHH-HHHHHHHhC-
Confidence 0 03677899999999999999999 788888877
Q ss_pred CcEEEEeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 408 NCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 408 ~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
+++++++ ++||.. .+.++++.+.|. +|++
T Consensus 146 ~~~~~~~-~~~H~~-~~~~~~~~~~i~--~fl~ 174 (176)
T 2qjw_A 146 SARLLLV-DDGHRL-GAHVQAASRAFA--ELLQ 174 (176)
T ss_dssp TCEEEEE-SSCTTC-TTCHHHHHHHHH--HHHH
T ss_pred CceEEEe-CCCccc-cccHHHHHHHHH--HHHH
Confidence 7899999 899998 488999999998 4554
|
| >3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.1e-21 Score=173.93 Aligned_cols=166 Identities=15% Similarity=0.159 Sum_probs=133.9
Q ss_pred CCeEEEeCCCCCch-hhHHHhHhhhcCCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHH
Q 012190 179 SPTLLFLPGIDGLG-LGLILHHKPLGKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLAL 257 (468)
Q Consensus 179 ~p~lV~lHG~~~s~-~~~~~~~~~L~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~ 257 (468)
+|+|||+||++++. ..|......+.. .++.+|+||++..+++++++++.++++. .+ ++++|+||||||.+++
T Consensus 17 ~~~vv~~HG~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~l~G~S~Gg~~a~ 89 (191)
T 3bdv_A 17 QLTMVLVPGLRDSDDEHWQSHWERRFP--HWQRIRQREWYQADLDRWVLAIRRELSV----CT-QPVILIGHSFGALAAC 89 (191)
T ss_dssp TCEEEEECCTTCCCTTSHHHHHHHHCT--TSEECCCSCCSSCCHHHHHHHHHHHHHT----CS-SCEEEEEETHHHHHHH
T ss_pred CceEEEECCCCCCchhhHHHHHHHhcC--CeEEEeccCCCCcCHHHHHHHHHHHHHh----cC-CCeEEEEEChHHHHHH
Confidence 67999999999988 678777665432 3467899999999999999999999986 33 6899999999999999
Q ss_pred HHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhh
Q 012190 258 AVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNN 337 (468)
Q Consensus 258 ~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (468)
.+|.++|++++++|+++|...... .
T Consensus 90 ~~a~~~p~~v~~lvl~~~~~~~~~-----------~-------------------------------------------- 114 (191)
T 3bdv_A 90 HVVQQGQEGIAGVMLVAPAEPMRF-----------E-------------------------------------------- 114 (191)
T ss_dssp HHHHTTCSSEEEEEEESCCCGGGG-----------T--------------------------------------------
T ss_pred HHHHhcCCCccEEEEECCCccccc-----------c--------------------------------------------
Confidence 999999999999999998543210 0
Q ss_pred cchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCC
Q 012190 338 LPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDN 417 (468)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~a 417 (468)
++.. ..+..+++|+++++|++|.++|++ ..+.+.+.+ ++++++++++
T Consensus 115 --------------~~~~-----------------~~~~~~~~P~lii~g~~D~~~~~~-~~~~~~~~~-~~~~~~~~~~ 161 (191)
T 3bdv_A 115 --------------IDDR-----------------IQASPLSVPTLTFASHNDPLMSFT-RAQYWAQAW-DSELVDVGEA 161 (191)
T ss_dssp --------------CTTT-----------------SCSSCCSSCEEEEECSSBTTBCHH-HHHHHHHHH-TCEEEECCSC
T ss_pred --------------Cccc-----------------cccccCCCCEEEEecCCCCcCCHH-HHHHHHHhc-CCcEEEeCCC
Confidence 0000 234678999999999999999999 688888887 8999999999
Q ss_pred Cccccc----cCcHHHHHHHHhcCccccc
Q 012190 418 GHTLLL----EEGISLLTIIKGTCKYRRS 442 (468)
Q Consensus 418 GH~~~~----e~p~~~~~~I~~~~F~~r~ 442 (468)
||+++. +.|+.+ +.|. +|+.+.
T Consensus 162 gH~~~~~~~~~~~~~~-~~i~--~fl~~~ 187 (191)
T 3bdv_A 162 GHINAEAGFGPWEYGL-KRLA--EFSEIL 187 (191)
T ss_dssp TTSSGGGTCSSCHHHH-HHHH--HHHHTT
T ss_pred CcccccccchhHHHHH-HHHH--HHHHHh
Confidence 999998 456555 7777 566543
|
| >3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.3e-21 Score=185.24 Aligned_cols=212 Identities=18% Similarity=0.196 Sum_probs=140.8
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC-----ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChh
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-----PFEGLVKFVEETVRREHASSPEKPIYLVGDSFG 252 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-----s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~G 252 (468)
++++|||+||++++...|..+.+ |..+|+|+++|+||++.+ +++++++++.++++.+. +..+++|+|||||
T Consensus 20 ~~~~lv~lhg~~~~~~~~~~~~~-l~~~~~v~~~d~~G~~~~~~~~~~~~~~~~~~~~~i~~~~---~~~~~~l~GhS~G 95 (265)
T 3ils_A 20 ARKTLFMLPDGGGSAFSYASLPR-LKSDTAVVGLNCPYARDPENMNCTHGAMIESFCNEIRRRQ---PRGPYHLGGWSSG 95 (265)
T ss_dssp SSEEEEEECCTTCCGGGGTTSCC-CSSSEEEEEEECTTTTCGGGCCCCHHHHHHHHHHHHHHHC---SSCCEEEEEETHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHh-cCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHhC---CCCCEEEEEECHh
Confidence 47899999999999999999999 988999999999999865 58899999999988753 3458999999999
Q ss_pred HHHHHHHHH---hCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhH
Q 012190 253 GCLALAVAA---RNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRI 329 (468)
Q Consensus 253 G~ia~~~a~---~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (468)
|.+|+.+|. .+|+++.++|++++.......... ......+..+ ....+.+ ......
T Consensus 96 g~ia~~~a~~l~~~~~~v~~lvl~~~~~~~~~~~~~----------~~~~~~~~~~-~~~~~~~---------~~~~~~- 154 (265)
T 3ils_A 96 GAFAYVVAEALVNQGEEVHSLIIIDAPIPQAMEQLP----------RAFYEHCNSI-GLFATQP---------GASPDG- 154 (265)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEESCCSSCCCCCCC----------HHHHHHHHHT-TTTTTSS---------SSCSSS-
T ss_pred HHHHHHHHHHHHhCCCCceEEEEEcCCCCCcccccC----------HHHHHHHHHH-HHhCCCc---------cccccC-
Confidence 999999998 778899999999876533221111 1000001000 0000000 000000
Q ss_pred HhhhhhhhcchhcchhhhhhccCCcchhHHHHH-HHHHHhHHHhhhcccCCceEE-EEEeCC---CCCC-----------
Q 012190 330 KLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLK-LLKSASAYANSRLHAVKAEVL-VLASGK---DNML----------- 393 (468)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~i~~PvL-lI~G~~---D~~v----------- 393 (468)
..+ .. ..+...+. .+.....+.......+++|++ +++|++ |..+
T Consensus 155 -~~~------------------~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~P~~lii~G~~~~~D~~~~~~~~~~~~~~ 214 (265)
T 3ils_A 155 -STE------------------PP-SYLIPHFTAVVDVMLDYKLAPLHARRMPKVGIVWAADTVMDERDAPKMKGMHFMI 214 (265)
T ss_dssp -CSC------------------CC-TTHHHHHHHHHHHTTTCCCCCCCCSSCCEEEEEEEEECSSCTTTSCCCSSCCTTT
T ss_pred -CHH------------------HH-HHHHHHHHHHHHHHHhcCCCCCccCCCCeEEEEEccCCCCccccCccccCcchhh
Confidence 000 00 00000000 000111111123357899988 999999 9987
Q ss_pred ---CcHHHHHHHHHhCC--CcEEEEeCCCCcccc--ccCcHHHHHHHHh
Q 012190 394 ---PSEDEAKRLNNSLQ--NCIVRNFKDNGHTLL--LEEGISLLTIIKG 435 (468)
Q Consensus 394 ---~~~~~~~~l~~~l~--~~~~~~i~~aGH~~~--~e~p~~~~~~I~~ 435 (468)
+.. ....+.+..+ ++++++++|+||+.+ .|+|+++++.|.+
T Consensus 215 ~~~~~~-~~~~w~~~~~~~~~~~~~i~gagH~~~~~~e~~~~v~~~i~~ 262 (265)
T 3ils_A 215 QKRTEF-GPDGWDTIMPGASFDIVRADGANHFTLMQKEHVSIISDLIDR 262 (265)
T ss_dssp SCCCCC-SCTTHHHHSTTCCEEEEEEEEEETTGGGSTTTTHHHHHHHHH
T ss_pred cccccc-CcchHHHhCCccceeEEEcCCCCcceeeChhhHHHHHHHHHH
Confidence 343 3455666665 889999999999999 8999999999984
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=6.7e-21 Score=175.81 Aligned_cols=188 Identities=16% Similarity=0.138 Sum_probs=144.5
Q ss_pred ccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCCC--------------
Q 012190 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTP-------------- 220 (468)
Q Consensus 156 ~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss-------------- 220 (468)
+...+|.......+.+.+. ..|+||++||++++...|..+++.| ..+|.|+++|+||+|.|.
T Consensus 8 ~~~~~g~~l~~~~~~p~~~---~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~ 84 (236)
T 1zi8_A 8 IQSYDGHTFGALVGSPAKA---PAPVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQDERQREQA 84 (236)
T ss_dssp EECTTSCEECEEEECCSSC---SEEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTCHHHHHHH
T ss_pred EecCCCCeEEEEEECCCCC---CCCEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEeccccccCCCcccccccchhhhhhh
Confidence 4455665443333333322 4789999999999999999999999 558999999999999762
Q ss_pred --------hHHHHHHHHHHHHHHhhcCC-CCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHH
Q 012190 221 --------FEGLVKFVEETVRREHASSP-EKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPIL 291 (468)
Q Consensus 221 --------~~~~~~dl~~~i~~~~~~~~-~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~ 291 (468)
.++.++|+.++++.+..... ..+++++|||+||.+++.+|.++| +++++++.|....
T Consensus 85 ~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~------------ 150 (236)
T 1zi8_A 85 YKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYSLGGALAFLVASKGY--VDRAVGYYGVGLE------------ 150 (236)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHHHTSSTTEEEEEEEEEETHHHHHHHHHHHHTC--SSEEEEESCSSGG------------
T ss_pred hhhhhccCcchhhHHHHHHHHHHHhccCCCCCEEEEEECcCHHHHHHHhccCC--ccEEEEecCcccc------------
Confidence 45568899999998875433 368999999999999999999998 8899988763200
Q ss_pred hhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHH
Q 012190 292 KAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYA 371 (468)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 371 (468)
+ .
T Consensus 151 --------------------~----------------------------------------------------------~ 152 (236)
T 1zi8_A 151 --------------------K----------------------------------------------------------Q 152 (236)
T ss_dssp --------------------G----------------------------------------------------------C
T ss_pred --------------------c----------------------------------------------------------c
Confidence 0 0
Q ss_pred hhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhC---CCcEEEEeCCCCccccccCc--------HHHHHHHHhcCccc
Q 012190 372 NSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSL---QNCIVRNFKDNGHTLLLEEG--------ISLLTIIKGTCKYR 440 (468)
Q Consensus 372 ~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l---~~~~~~~i~~aGH~~~~e~p--------~~~~~~I~~~~F~~ 440 (468)
...+.++++|+|+++|++|.+++++ ..+.+.+.+ +++++++++++||....+.+ +++.+.+. +|++
T Consensus 153 ~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~i~--~fl~ 229 (236)
T 1zi8_A 153 LNKVPEVKHPALFHMGGQDHFVPAP-SRQLITEGFGANPLLQVHWYEEAGHSFARTGSSGYVASAAALANERTL--DFLV 229 (236)
T ss_dssp GGGGGGCCSCEEEEEETTCTTSCHH-HHHHHHHHHTTCTTEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHH--HHHG
T ss_pred hhhhhhcCCCEEEEecCCCCCCCHH-HHHHHHHHHHhCCCceEEEECCCCcccccCCCCccCHHHHHHHHHHHH--HHHH
Confidence 1233667899999999999999999 688888877 58899999999998887765 35666666 4554
Q ss_pred c
Q 012190 441 R 441 (468)
Q Consensus 441 r 441 (468)
+
T Consensus 230 ~ 230 (236)
T 1zi8_A 230 P 230 (236)
T ss_dssp G
T ss_pred H
Confidence 4
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.86 E-value=4.5e-22 Score=195.79 Aligned_cols=100 Identities=27% Similarity=0.313 Sum_probs=87.1
Q ss_pred CCCeEEEeCCCCCchhhHH----------------HhHhhh-cCCeEEEEecCCCCCCCC--------------hHHHHH
Q 012190 178 GSPTLLFLPGIDGLGLGLI----------------LHHKPL-GKAFEVRCLHIPVYDRTP--------------FEGLVK 226 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~----------------~~~~~L-~~~~~V~~~D~~G~G~Ss--------------~~~~~~ 226 (468)
++|+|||+||++++...|. .+++.| .++|+|+++|+||||.|+ ++++++
T Consensus 49 ~~~~vv~~hG~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~ 128 (354)
T 2rau_A 49 GNDAVLILPGTWSSGEQLVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLKDRQLSFTANWGWSTWIS 128 (354)
T ss_dssp CEEEEEEECCTTCCHHHHHHSEETTEECSCCCGGGCHHHHHHHTTEEEEEEECGGGGCCTTCCGGGGGGGTTCSHHHHHH
T ss_pred CCCEEEEECCCCCCccccccccccccccccccchhhHHHHHHhCCCEEEEecCCCCCCCCcccccccccccCCcHHHHHH
Confidence 3789999999999998777 788888 457999999999999883 377889
Q ss_pred HHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhC-CCCceEEEEeCCCC
Q 012190 227 FVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARN-PTIDLILILSNPAT 277 (468)
Q Consensus 227 dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~-P~~v~~lVli~p~~ 277 (468)
|+.++++.+....+.++++++||||||.+++.+|.++ |++++++|++++..
T Consensus 129 d~~~~~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~p~~v~~lvl~~~~~ 180 (354)
T 2rau_A 129 DIKEVVSFIKRDSGQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDGGP 180 (354)
T ss_dssp HHHHHHHHHHHHHCCSSEEEEEETHHHHHHHHHHHHHHHHHEEEEEEESCSC
T ss_pred HHHHHHHHHHHhcCCceEEEEEECHhHHHHHHHHHhcCccccceEEEecccc
Confidence 9999999876554567999999999999999999999 99999999997654
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A | Back alignment and structure |
|---|
Probab=99.86 E-value=5.9e-22 Score=184.53 Aligned_cols=215 Identities=17% Similarity=0.243 Sum_probs=128.3
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCC---hHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHH
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP---FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGC 254 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss---~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ 254 (468)
.+++|||+||++++...|.++++.|+++|+|+++|+||||.|+ .+++.+.+..+++.+.. .+.++++|+||||||.
T Consensus 12 ~~~~lv~lhg~g~~~~~~~~~~~~L~~~~~vi~~Dl~GhG~S~~~~~~~~~~~~~~~~~~l~~-~~~~~~~lvGhSmGG~ 90 (242)
T 2k2q_B 12 EKTQLICFPFAGGYSASFRPLHAFLQGECEMLAAEPPGHGTNQTSAIEDLEELTDLYKQELNL-RPDRPFVLFGHSMGGM 90 (242)
T ss_dssp CCCEEESSCCCCHHHHHHHHHHHHHCCSCCCEEEECCSSCCSCCCTTTHHHHHHHHTTTTCCC-CCCSSCEEECCSSCCH
T ss_pred CCceEEEECCCCCCHHHHHHHHHhCCCCeEEEEEeCCCCCCCCCCCcCCHHHHHHHHHHHHHh-hcCCCEEEEeCCHhHH
Confidence 3678999999999999999999999889999999999999984 34444444433333211 1125899999999999
Q ss_pred HHHHHHHh------CCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChh
Q 012190 255 LALAVAAR------NPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPR 328 (468)
Q Consensus 255 ia~~~a~~------~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (468)
+|+.+|.+ +|+.+ ++.+............ .... . ..+..+... ......
T Consensus 91 iA~~~A~~~~~~~~~p~~v---~l~~~~~~~~~~~~~~------~~~~--~----~~~~~~~~~----------~~~~~~ 145 (242)
T 2k2q_B 91 ITFRLAQKLEREGIFPQAV---IISAIQPPHIQRKKVS------HLPD--D----QFLDHIIQL----------GGMPAE 145 (242)
T ss_dssp HHHHHHHHHHHHHCSSCSE---EEEEEECSCCCSCCCS------SCTT--H----HHHHTTCCT----------TCCCCT
T ss_pred HHHHHHHHHHHcCCCCCEE---EEECCCCCCCCccccc------CCCH--H----HHHHHHHHh----------CCCChH
Confidence 99999987 56653 3322111000000000 0000 0 000000000 000000
Q ss_pred HH-hhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC
Q 012190 329 IK-LEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ 407 (468)
Q Consensus 329 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~ 407 (468)
.. ....... +. ..+....... .......+..+++|+|+|+|++|..++ . ..+.+.+..+
T Consensus 146 ~~~~~~~~~~--------------~~-~~~~~~~~~~---~~~~~~~l~~i~~P~lvi~G~~D~~~~-~-~~~~~~~~~~ 205 (242)
T 2k2q_B 146 LVENKEVMSF--------------FL-PSFRSDYRAL---EQFELYDLAQIQSPVHVFNGLDDKKCI-R-DAEGWKKWAK 205 (242)
T ss_dssp TTHHHHTTTT--------------CC-SCHHHHHHHH---TCCCCSCCTTCCCSEEEEEECSSCCHH-H-HHHHHHTTCC
T ss_pred HhcCHHHHHH--------------HH-HHHHHHHHHH---HhcccCCCCccCCCEEEEeeCCCCcCH-H-HHHHHHHHhc
Confidence 00 0000000 00 0111111111 000011257899999999999999865 3 3666777778
Q ss_pred CcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 408 NCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 408 ~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
+.+++++++ ||++++|+|+++++.|. +|+.+
T Consensus 206 ~~~~~~~~~-gH~~~~e~p~~~~~~i~--~fl~~ 236 (242)
T 2k2q_B 206 DITFHQFDG-GHMFLLSQTEEVAERIF--AILNQ 236 (242)
T ss_dssp CSEEEEEEC-CCSHHHHHCHHHHHHHH--HHHHT
T ss_pred CCeEEEEeC-CceeEcCCHHHHHHHHH--HHhhc
Confidence 888888984 99999999999999999 67765
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.4e-21 Score=184.84 Aligned_cols=196 Identities=16% Similarity=0.181 Sum_probs=142.8
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhc-CCeEEEEecCCCCCCC-------ChHHHHHHHHHHHHHHhhcC--CCCcEEEE
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHASS--PEKPIYLV 247 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~-~~~~V~~~D~~G~G~S-------s~~~~~~dl~~~i~~~~~~~--~~~~i~Lv 247 (468)
+.|+|||+||++++...|..+++.|. .+|.|+++|+||+|.| +++++++|+.++++.+.... +.++++|+
T Consensus 27 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~g~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~v~l~ 106 (290)
T 3ksr_A 27 GMPGVLFVHGWGGSQHHSLVRAREAVGLGCICMTFDLRGHEGYASMRQSVTRAQNLDDIKAAYDQLASLPYVDAHSIAVV 106 (290)
T ss_dssp SEEEEEEECCTTCCTTTTHHHHHHHHTTTCEEECCCCTTSGGGGGGTTTCBHHHHHHHHHHHHHHHHTSTTEEEEEEEEE
T ss_pred CCcEEEEeCCCCCCcCcHHHHHHHHHHCCCEEEEeecCCCCCCCCCcccccHHHHHHHHHHHHHHHHhcCCCCccceEEE
Confidence 37899999999999999999999994 4899999999999988 57889999999999886542 23589999
Q ss_pred EeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCCh
Q 012190 248 GDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPP 327 (468)
Q Consensus 248 GhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (468)
||||||.+++.+|.++| ++++++++|....... +......... ...
T Consensus 107 G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~~~~~~-~~~~~~~~~~--------~~~----------------------- 152 (290)
T 3ksr_A 107 GLSYGGYLSALLTRERP--VEWLALRSPALYKDAH-WDQPKVSLNA--------DPD----------------------- 152 (290)
T ss_dssp EETHHHHHHHHHTTTSC--CSEEEEESCCCCCSSC-TTSBHHHHHH--------STT-----------------------
T ss_pred EEchHHHHHHHHHHhCC--CCEEEEeCcchhhhhh-hhcccccccC--------Chh-----------------------
Confidence 99999999999999998 8889999886643221 1100000000 000
Q ss_pred hHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC
Q 012190 328 RIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ 407 (468)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~ 407 (468)
...+.... ..... ......+..+++|+|+++|++|.+++++ ..+.+.+.++
T Consensus 153 ---~~~~~~~~-------------~~~~~------------~~~~~~~~~~~~P~lii~G~~D~~v~~~-~~~~~~~~~~ 203 (290)
T 3ksr_A 153 ---LMDYRRRA-------------LAPGD------------NLALAACAQYKGDVLLVEAENDVIVPHP-VMRNYADAFT 203 (290)
T ss_dssp ---HHHHTTSC-------------CCGGG------------CHHHHHHHHCCSEEEEEEETTCSSSCHH-HHHHHHHHTT
T ss_pred ---hhhhhhhh-------------hhhcc------------ccHHHHHHhcCCCeEEEEecCCcccChH-HHHHHHHHhc
Confidence 00000000 00000 0001234678899999999999999999 7999999887
Q ss_pred C---cEEEEeCCCCcccccc-CcHHHHHHHHhc
Q 012190 408 N---CIVRNFKDNGHTLLLE-EGISLLTIIKGT 436 (468)
Q Consensus 408 ~---~~~~~i~~aGH~~~~e-~p~~~~~~I~~~ 436 (468)
+ +++++++++||.+..+ .++++.+.+.+|
T Consensus 204 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~f 236 (290)
T 3ksr_A 204 NARSLTSRVIAGADHALSVKEHQQEYTRALIDW 236 (290)
T ss_dssp TSSEEEEEEETTCCTTCCSHHHHHHHHHHHHHH
T ss_pred cCCCceEEEcCCCCCCCCcchHHHHHHHHHHHH
Confidence 5 4599999999987654 888888888843
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.86 E-value=5.5e-21 Score=178.74 Aligned_cols=167 Identities=17% Similarity=0.206 Sum_probs=136.4
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEe--cCCCCCCCC--------------hHHHHHHHHHHHHHHhhcCCC
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCL--HIPVYDRTP--------------FEGLVKFVEETVRREHASSPE 241 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~--D~~G~G~Ss--------------~~~~~~dl~~~i~~~~~~~~~ 241 (468)
+.|+|||+||++++...|..+++.|+++|.|+++ |++|+|.|+ +.+.++++.++++.+......
T Consensus 61 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 140 (251)
T 2r8b_A 61 GAPLFVLLHGTGGDENQFFDFGARLLPQATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADFIKANREHYQA 140 (251)
T ss_dssp TSCEEEEECCTTCCHHHHHHHHHHHSTTSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCcEEEEEeCCCCCHhHHHHHHHhcCCCceEEEecCCcCCCCCcccccCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCC
Confidence 4789999999999999999999999888999999 899998662 233466666666665443356
Q ss_pred CcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhh
Q 012190 242 KPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNI 321 (468)
Q Consensus 242 ~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (468)
.+++|+||||||.+++.+|.++|++++++|+++|...... .
T Consensus 141 ~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~------------------------------~--------- 181 (251)
T 2r8b_A 141 GPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP------------------------------K--------- 181 (251)
T ss_dssp CSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC------------------------------C---------
T ss_pred CcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCccc------------------------------c---------
Confidence 7999999999999999999999999999999998653210 0
Q ss_pred ccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHH
Q 012190 322 ENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKR 401 (468)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~ 401 (468)
.....+++|+|+++|++|.+++.+ ..+.
T Consensus 182 ---------------------------------------------------~~~~~~~~P~li~~g~~D~~~~~~-~~~~ 209 (251)
T 2r8b_A 182 ---------------------------------------------------ISPAKPTRRVLITAGERDPICPVQ-LTKA 209 (251)
T ss_dssp ---------------------------------------------------CCCCCTTCEEEEEEETTCTTSCHH-HHHH
T ss_pred ---------------------------------------------------ccccccCCcEEEeccCCCccCCHH-HHHH
Confidence 011346789999999999999998 7999
Q ss_pred HHHhCC--CcEEE-EeCCCCccccccCcHHHHHHHHh
Q 012190 402 LNNSLQ--NCIVR-NFKDNGHTLLLEEGISLLTIIKG 435 (468)
Q Consensus 402 l~~~l~--~~~~~-~i~~aGH~~~~e~p~~~~~~I~~ 435 (468)
+.+.++ +.++. .++++||.++.+.++++.+.|.+
T Consensus 210 ~~~~l~~~~~~~~~~~~~~gH~~~~~~~~~~~~~l~~ 246 (251)
T 2r8b_A 210 LEESLKAQGGTVETVWHPGGHEIRSGEIDAVRGFLAA 246 (251)
T ss_dssp HHHHHHHHSSEEEEEEESSCSSCCHHHHHHHHHHHGG
T ss_pred HHHHHHHcCCeEEEEecCCCCccCHHHHHHHHHHHHH
Confidence 998887 66666 78889999999998888888873
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.85 E-value=2e-20 Score=172.12 Aligned_cols=171 Identities=16% Similarity=0.171 Sum_probs=134.9
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhc-CCeEEEEe-------------------cCCCCCCC------ChHHHHHHHHHH
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCL-------------------HIPVYDRT------PFEGLVKFVEET 231 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~-~~~~V~~~-------------------D~~G~G~S------s~~~~~~dl~~~ 231 (468)
+.|+|||+||++++...|..+.+.|. .+|.|+++ |++|+... ++++.++++.++
T Consensus 22 ~~~~vv~lHG~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~~~~~~~~~~~~~~~~~~~~~~ 101 (232)
T 1fj2_A 22 ATAAVIFLHGLGDTGHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQEDESGIKQAAENIKAL 101 (232)
T ss_dssp CSEEEEEECCSSSCHHHHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTCCBCHHHHHHHHHHHHHH
T ss_pred CCceEEEEecCCCccchHHHHHHHHhcCCcEEEecCCCccccccccccccccccccccCCcccccccHHHHHHHHHHHHH
Confidence 47899999999999999999999996 48999997 77777222 367888889888
Q ss_pred HHHHhhc-CCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhc
Q 012190 232 VRREHAS-SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVM 310 (468)
Q Consensus 232 i~~~~~~-~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (468)
++.+... ...++++++||||||.+|+.+|.++|++++++|+++|....... .
T Consensus 102 i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~-----------~---------------- 154 (232)
T 1fj2_A 102 IDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRAS-----------F---------------- 154 (232)
T ss_dssp HHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGG-----------S----------------
T ss_pred HHHHhcCCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCcc-----------c----------------
Confidence 8886431 12369999999999999999999999999999999985422100 0
Q ss_pred CChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCC
Q 012190 311 GDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKD 390 (468)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D 390 (468)
+. ....+..+++|+|+++|++|
T Consensus 155 ------------------------------------------~~----------------~~~~~~~~~~P~l~i~G~~D 176 (232)
T 1fj2_A 155 ------------------------------------------PQ----------------GPIGGANRDISILQCHGDCD 176 (232)
T ss_dssp ------------------------------------------CS----------------SCCCSTTTTCCEEEEEETTC
T ss_pred ------------------------------------------cc----------------cccccccCCCCEEEEecCCC
Confidence 00 00123667899999999999
Q ss_pred CCCCcHHHHHHHHHhC------CCcEEEEeCCCCccccccCcHHHHHHHH
Q 012190 391 NMLPSEDEAKRLNNSL------QNCIVRNFKDNGHTLLLEEGISLLTIIK 434 (468)
Q Consensus 391 ~~v~~~~~~~~l~~~l------~~~~~~~i~~aGH~~~~e~p~~~~~~I~ 434 (468)
.+++.+ ..+.+.+.+ +++++++++++||..+.+..+.+.+.|.
T Consensus 177 ~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~H~~~~~~~~~i~~~l~ 225 (232)
T 1fj2_A 177 PLVPLM-FGSLTVEKLKTLVNPANVTFKTYEGMMHSSCQQEMMDVKQFID 225 (232)
T ss_dssp SSSCHH-HHHHHHHHHHHHSCGGGEEEEEETTCCSSCCHHHHHHHHHHHH
T ss_pred ccCCHH-HHHHHHHHHHHhCCCCceEEEEeCCCCcccCHHHHHHHHHHHH
Confidence 999998 687777666 5689999999999997777766666666
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.85 E-value=2.7e-20 Score=170.02 Aligned_cols=163 Identities=18% Similarity=0.189 Sum_probs=133.3
Q ss_pred CCCeEEEeCCCC---C--chhhHHHhHhhh-cCCeEEEEecCCCCCCCC-----hHHHHHHHHHHHHHHhhcCCCCcEEE
Q 012190 178 GSPTLLFLPGID---G--LGLGLILHHKPL-GKAFEVRCLHIPVYDRTP-----FEGLVKFVEETVRREHASSPEKPIYL 246 (468)
Q Consensus 178 ~~p~lV~lHG~~---~--s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss-----~~~~~~dl~~~i~~~~~~~~~~~i~L 246 (468)
+.|+||++||++ + ....|..+.+.| ..+|.|+++|+||+|.|+ .+..++|+.++++.+....+..++++
T Consensus 36 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l 115 (220)
T 2fuk_A 36 QPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGSFDHGDGEQDDLRAVAEWVRAQRPTDTLWL 115 (220)
T ss_dssp CSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCSCCCTTTHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred ccCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEecCCCCCCCCCcccCchhHHHHHHHHHHHHhcCCCCcEEE
Confidence 478999999953 3 334578888888 558999999999999984 34678888888888887666679999
Q ss_pred EEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCC
Q 012190 247 VGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLP 326 (468)
Q Consensus 247 vGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (468)
+|||+||.+++.+|.++ +++++|+++|......
T Consensus 116 ~G~S~Gg~~a~~~a~~~--~v~~~v~~~~~~~~~~--------------------------------------------- 148 (220)
T 2fuk_A 116 AGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRWD--------------------------------------------- 148 (220)
T ss_dssp EEETHHHHHHHHHHHHH--CCSEEEEESCCBTTBC---------------------------------------------
T ss_pred EEECHHHHHHHHHHhhc--cccEEEEecccccchh---------------------------------------------
Confidence 99999999999999988 8999999998653211
Q ss_pred hhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhC
Q 012190 327 PRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSL 406 (468)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l 406 (468)
. ..+. ..+|+++++|++|.+++.+ ..+.+.+.+
T Consensus 149 --------~-------------------------------------~~~~-~~~p~l~i~g~~D~~~~~~-~~~~~~~~~ 181 (220)
T 2fuk_A 149 --------F-------------------------------------SDVQ-PPAQWLVIQGDADEIVDPQ-AVYDWLETL 181 (220)
T ss_dssp --------C-------------------------------------TTCC-CCSSEEEEEETTCSSSCHH-HHHHHHTTC
T ss_pred --------h-------------------------------------hhcc-cCCcEEEEECCCCcccCHH-HHHHHHHHh
Confidence 0 0011 2578999999999999999 799999998
Q ss_pred -CCcEEEEeCCCCccccccCcHHHHHHHHh
Q 012190 407 -QNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (468)
Q Consensus 407 -~~~~~~~i~~aGH~~~~e~p~~~~~~I~~ 435 (468)
+++++++++++||.+.. +++++.+.+.+
T Consensus 182 ~~~~~~~~~~~~~H~~~~-~~~~~~~~i~~ 210 (220)
T 2fuk_A 182 EQQPTLVRMPDTSHFFHR-KLIDLRGALQH 210 (220)
T ss_dssp SSCCEEEEETTCCTTCTT-CHHHHHHHHHH
T ss_pred CcCCcEEEeCCCCceehh-hHHHHHHHHHH
Confidence 78999999999999888 47788888883
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=99.85 E-value=6e-21 Score=174.20 Aligned_cols=184 Identities=14% Similarity=0.070 Sum_probs=142.3
Q ss_pred CCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhh--HHHhHhhh-cCCeEEEEecCCCCCC-----------CChHHHH
Q 012190 160 DGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLG--LILHHKPL-GKAFEVRCLHIPVYDR-----------TPFEGLV 225 (468)
Q Consensus 160 dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~--~~~~~~~L-~~~~~V~~~D~~G~G~-----------Ss~~~~~ 225 (468)
+|.......+.+.+ ..|+||++||++++... +..+.+.| ..+|.|+++|+||+|. .++++++
T Consensus 20 ~g~~l~~~~~~p~~----~~p~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~ 95 (223)
T 2o2g_A 20 GEVKLKGNLVIPNG----ATGIVLFAHGSGSSRYSPRNRYVAEVLQQAGLATLLIDLLTQEEEEIDLRTRHLRFDIGLLA 95 (223)
T ss_dssp TTEEEEEEEECCTT----CCEEEEEECCTTCCTTCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHCSSTTCHHHHH
T ss_pred CCeEEEEEEecCCC----CceEEEEecCCCCCCCccchHHHHHHHHHCCCEEEEEcCCCcCCCCccchhhcccCcHHHHH
Confidence 55443333333333 37899999999998874 45678888 4579999999999996 4577888
Q ss_pred HHHHHHHHHHhhcC--CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHH
Q 012190 226 KFVEETVRREHASS--PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVP 303 (468)
Q Consensus 226 ~dl~~~i~~~~~~~--~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (468)
+++.++++.+.... ...+++++|||+||.+++.+|.++|++++++|+++|.....
T Consensus 96 ~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~----------------------- 152 (223)
T 2o2g_A 96 SRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRPDLA----------------------- 152 (223)
T ss_dssp HHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCGGGC-----------------------
T ss_pred HHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCceEEEEEeCCCCCcC-----------------------
Confidence 99999999887552 34589999999999999999999999999999998732100
Q ss_pred HHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEE
Q 012190 304 YLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVL 383 (468)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvL 383 (468)
...+.++++|++
T Consensus 153 --------------------------------------------------------------------~~~~~~~~~P~l 164 (223)
T 2o2g_A 153 --------------------------------------------------------------------PSALPHVKAPTL 164 (223)
T ss_dssp --------------------------------------------------------------------TTTGGGCCSCEE
T ss_pred --------------------------------------------------------------------HHHHhcCCCCEE
Confidence 012356789999
Q ss_pred EEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccc-cCcHHHHHHHHhcCcccc
Q 012190 384 VLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLL-EEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 384 lI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~-e~p~~~~~~I~~~~F~~r 441 (468)
+++|++|.+++.. ..+.+.+..++++++.++++||.+.. +.++++.+.+. +|+++
T Consensus 165 ~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~--~fl~~ 220 (223)
T 2o2g_A 165 LIVGGYDLPVIAM-NEDALEQLQTSKRLVIIPRASHLFEEPGALTAVAQLAS--EWFMH 220 (223)
T ss_dssp EEEETTCHHHHHH-HHHHHHHCCSSEEEEEETTCCTTCCSTTHHHHHHHHHH--HHHHH
T ss_pred EEEccccCCCCHH-HHHHHHhhCCCeEEEEeCCCCcccCChHHHHHHHHHHH--HHHHH
Confidence 9999999999866 46666666578999999999999766 45688888888 45543
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 | Back alignment and structure |
|---|
Probab=99.85 E-value=2.5e-20 Score=176.69 Aligned_cols=200 Identities=12% Similarity=0.063 Sum_probs=138.3
Q ss_pred CCCeEEEeCCCC-----CchhhHHHhHhhh-----cCCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEE
Q 012190 178 GSPTLLFLPGID-----GLGLGLILHHKPL-----GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLV 247 (468)
Q Consensus 178 ~~p~lV~lHG~~-----~s~~~~~~~~~~L-----~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~Lv 247 (468)
+.|+|||+||.+ ++...|..+++.| ..+|.|+++|+|+.+..++....+|+.+.++.+....+.++++|+
T Consensus 40 ~~p~vv~lHGgg~~~g~~~~~~~~~~~~~L~~~a~~~g~~vi~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~ 119 (273)
T 1vkh_A 40 TREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEITNPRNLYDAVSNITRLVKEKGLTNINMV 119 (273)
T ss_dssp CCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHHHTCCCEEEE
T ss_pred CCeEEEEECCCcccCCcCChHHHHHHHHHHhhhhccCCcEEEEeecccCCCCCCCcHHHHHHHHHHHHHHhCCcCcEEEE
Confidence 578999999965 4667899999988 678999999999999887777777777776666554556799999
Q ss_pred EeChhHHHHHHHHHhC-----------------CCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhc
Q 012190 248 GDSFGGCLALAVAARN-----------------PTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVM 310 (468)
Q Consensus 248 GhS~GG~ia~~~a~~~-----------------P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (468)
||||||.+|+.+|.++ |++++++|++++.... .......+. .........
T Consensus 120 G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~--------~~~~~~~~~-----~~~~~~~~~ 186 (273)
T 1vkh_A 120 GHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSL--------KELLIEYPE-----YDCFTRLAF 186 (273)
T ss_dssp EETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCH--------HHHHHHCGG-----GHHHHHHHC
T ss_pred EeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccH--------HHhhhhccc-----HHHHHHHHh
Confidence 9999999999999986 7899999999875421 011110000 000000000
Q ss_pred CChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCC
Q 012190 311 GDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKD 390 (468)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D 390 (468)
. .. ... +... ..... ......+..+++|+|+++|++|
T Consensus 187 ~-------------~~----~~~------------------~~~~-~~~~~-------~~~~~~~~~~~~P~lii~G~~D 223 (273)
T 1vkh_A 187 P-------------DG----IQM------------------YEEE-PSRVM-------PYVKKALSRFSIDMHLVHSYSD 223 (273)
T ss_dssp T-------------TC----GGG------------------CCCC-HHHHH-------HHHHHHHHHHTCEEEEEEETTC
T ss_pred c-------------cc----ccc------------------hhhc-ccccC-------hhhhhcccccCCCEEEEecCCc
Confidence 0 00 000 0000 00000 0001122347899999999999
Q ss_pred CCCCcHHHHHHHHHhCC----CcEEEEeCCCCccccccCcHHHHHHHHh
Q 012190 391 NMLPSEDEAKRLNNSLQ----NCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (468)
Q Consensus 391 ~~v~~~~~~~~l~~~l~----~~~~~~i~~aGH~~~~e~p~~~~~~I~~ 435 (468)
.++|.+ ..+.+.+.++ ++++++++++||..++++ +++.+.|.+
T Consensus 224 ~~vp~~-~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~i~~ 270 (273)
T 1vkh_A 224 ELLTLR-QTNCLISCLQDYQLSFKLYLDDLGLHNDVYKN-GKVAKYIFD 270 (273)
T ss_dssp SSCCTH-HHHHHHHHHHHTTCCEEEEEECCCSGGGGGGC-HHHHHHHHH
T ss_pred CCCChH-HHHHHHHHHHhcCCceEEEEeCCCcccccccC-hHHHHHHHH
Confidence 999998 6888887775 589999999999999999 888888884
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} | Back alignment and structure |
|---|
Probab=99.85 E-value=3.2e-20 Score=182.38 Aligned_cols=220 Identities=14% Similarity=0.074 Sum_probs=143.7
Q ss_pred cCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCCh---------------
Q 012190 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTPF--------------- 221 (468)
Q Consensus 157 ~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss~--------------- 221 (468)
...+|.......+.+.+. ...|+||++||++++...|..+...+..+|.|+++|+||+|.|+.
T Consensus 88 ~~~~g~~l~~~~~~P~~~--~~~p~vv~~HG~g~~~~~~~~~~~~~~~G~~v~~~D~rG~g~s~~~~~~~~~~~~~~~~~ 165 (346)
T 3fcy_A 88 TGVRGARIHAKYIKPKTE--GKHPALIRFHGYSSNSGDWNDKLNYVAAGFTVVAMDVRGQGGQSQDVGGVTGNTLNGHII 165 (346)
T ss_dssp ECGGGCEEEEEEEEESCS--SCEEEEEEECCTTCCSCCSGGGHHHHTTTCEEEEECCTTSSSSCCCCCCCSSCCSBCSSS
T ss_pred EcCCCCEEEEEEEecCCC--CCcCEEEEECCCCCCCCChhhhhHHHhCCcEEEEEcCCCCCCCCCCCcccCCCCcCccee
Confidence 344555443333333332 247899999999999999988887778999999999999998742
Q ss_pred ------------HHHHHHHHHHHHHHhhcC--CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcc
Q 012190 222 ------------EGLVKFVEETVRREHASS--PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPL 287 (468)
Q Consensus 222 ------------~~~~~dl~~~i~~~~~~~--~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~ 287 (468)
....+|+..+++.+.... ..++++++|||+||.+|+.+|.++|+ ++++|+++|.... .
T Consensus 166 ~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~-v~~~vl~~p~~~~-------~ 237 (346)
T 3fcy_A 166 RGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR-VRKVVSEYPFLSD-------Y 237 (346)
T ss_dssp TTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT-CCEEEEESCSSCC-------H
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCcc-ccEEEECCCcccC-------H
Confidence 245677777777765432 23689999999999999999999998 9999999885421 1
Q ss_pred hHHHhhC-chhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHH
Q 012190 288 FPILKAM-PDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKS 366 (468)
Q Consensus 288 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 366 (468)
....... .......+..++.... + ...........+..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~--~---------------------------------------~~~~~~~~~~~~~~ 276 (346)
T 3fcy_A 238 KRVWDLDLAKNAYQEITDYFRLFD--P---------------------------------------RHERENEVFTKLGY 276 (346)
T ss_dssp HHHHHTTCCCGGGHHHHHHHHHHC--T---------------------------------------TCTTHHHHHHHHGG
T ss_pred HHHhhccccccchHHHHHHHHhcC--C---------------------------------------CcchHHHHHHHhCc
Confidence 1111100 0000000111000000 0 00000000000100
Q ss_pred HhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC-CcEEEEeCCCCccccccCcHHHHHHHH
Q 012190 367 ASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ-NCIVRNFKDNGHTLLLEEGISLLTIIK 434 (468)
Q Consensus 367 ~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~-~~~~~~i~~aGH~~~~e~p~~~~~~I~ 434 (468)
......+.++++|+|+++|++|.+++++ ....+.+.++ ++++++++++||..+ .++.+.+.
T Consensus 277 --~d~~~~~~~i~~P~lii~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~----~~~~~~i~ 338 (346)
T 3fcy_A 277 --IDVKNLAKRIKGDVLMCVGLMDQVCPPS-TVFAAYNNIQSKKDIKVYPDYGHEPM----RGFGDLAM 338 (346)
T ss_dssp --GCHHHHGGGCCSEEEEEEETTCSSSCHH-HHHHHHTTCCSSEEEEEETTCCSSCC----TTHHHHHH
T ss_pred --ccHHHHHHhcCCCEEEEeeCCCCcCCHH-HHHHHHHhcCCCcEEEEeCCCCCcCH----HHHHHHHH
Confidence 0112345788999999999999999999 7989999887 689999999999998 34445555
|
| >4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.84 E-value=6.4e-21 Score=172.50 Aligned_cols=184 Identities=14% Similarity=0.122 Sum_probs=118.7
Q ss_pred CCeEEEeCCCCCchhhHH-----HhHhhhcCCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhH
Q 012190 179 SPTLLFLPGIDGLGLGLI-----LHHKPLGKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGG 253 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~-----~~~~~L~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG 253 (468)
.|+|||+||++++...+. ..++....+|+|+++|+||||+ +..+++..+++.. ..++++|+||||||
T Consensus 2 mptIl~lHGf~ss~~s~k~~~l~~~~~~~~~~~~v~~pdl~~~g~----~~~~~l~~~~~~~----~~~~i~l~G~SmGG 73 (202)
T 4fle_A 2 MSTLLYIHGFNSSPSSAKATTFKSWLQQHHPHIEMQIPQLPPYPA----EAAEMLESIVMDK----AGQSIGIVGSSLGG 73 (202)
T ss_dssp -CEEEEECCTTCCTTCHHHHHHHHHHHHHCTTSEEECCCCCSSHH----HHHHHHHHHHHHH----TTSCEEEEEETHHH
T ss_pred CcEEEEeCCCCCCCCccHHHHHHHHHHHcCCCcEEEEeCCCCCHH----HHHHHHHHHHHhc----CCCcEEEEEEChhh
Confidence 479999999998876543 2233334579999999999984 5667777777763 45599999999999
Q ss_pred HHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhh
Q 012190 254 CLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQ 333 (468)
Q Consensus 254 ~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (468)
.+|+.+|.++|..+..++...++... ........ .......+
T Consensus 74 ~~a~~~a~~~~~~~~~~~~~~~~~~~----------~~~~~~~~--------~~~~~~~~-------------------- 115 (202)
T 4fle_A 74 YFATWLSQRFSIPAVVVNPAVRPFEL----------LSDYLGEN--------QNPYTGQK-------------------- 115 (202)
T ss_dssp HHHHHHHHHTTCCEEEESCCSSHHHH----------GGGGCEEE--------ECTTTCCE--------------------
T ss_pred HHHHHHHHHhcccchheeeccchHHH----------HHHhhhhh--------cccccccc--------------------
Confidence 99999999999887666554321100 00000000 00000000
Q ss_pred hhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEE
Q 012190 334 LSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRN 413 (468)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~ 413 (468)
+... .. .. ...........++++|+|+|+|++|.++|.+ .++++ ++++++.+
T Consensus 116 ------------------~~~~--~~---~~-~~~~~~~~~~~~~~~P~LiihG~~D~~Vp~~-~s~~l---~~~~~l~i 167 (202)
T 4fle_A 116 ------------------YVLE--SR---HI-YDLKAMQIEKLESPDLLWLLQQTGDEVLDYR-QAVAY---YTPCRQTV 167 (202)
T ss_dssp ------------------EEEC--HH---HH-HHHHTTCCSSCSCGGGEEEEEETTCSSSCHH-HHHHH---TTTSEEEE
T ss_pred ------------------ccch--HH---HH-HHHHhhhhhhhccCceEEEEEeCCCCCCCHH-HHHHH---hhCCEEEE
Confidence 0000 00 00 0000112345678999999999999999998 67665 46899999
Q ss_pred eCCCCccccccCcHHHHHHHHhcCccc
Q 012190 414 FKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 414 i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
++|+||.+ ++++++.+.|. +|+.
T Consensus 168 ~~g~~H~~--~~~~~~~~~I~--~FL~ 190 (202)
T 4fle_A 168 ESGGNHAF--VGFDHYFSPIV--TFLG 190 (202)
T ss_dssp ESSCCTTC--TTGGGGHHHHH--HHHT
T ss_pred ECCCCcCC--CCHHHHHHHHH--HHHh
Confidence 99999964 56667777777 4654
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=5.4e-20 Score=169.13 Aligned_cols=168 Identities=16% Similarity=0.179 Sum_probs=135.7
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhc---CCeEEEEecCC-------------------CCCCC------ChHHHHHHHH
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLG---KAFEVRCLHIP-------------------VYDRT------PFEGLVKFVE 229 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~---~~~~V~~~D~~-------------------G~G~S------s~~~~~~dl~ 229 (468)
+.|+|||+||++++...|..+++.|. .+|.|+++|+| |+|.+ ++++.++++.
T Consensus 23 ~~~~vv~lHG~~~~~~~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~~~~~~~~~~~~~~ 102 (226)
T 3cn9_A 23 ADACIIWLHGLGADRTDFKPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPARAIDEDQLNASADQVI 102 (226)
T ss_dssp CCEEEEEECCTTCCGGGGHHHHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSSTTCBCHHHHHHHHHHHH
T ss_pred CCCEEEEEecCCCChHHHHHHHHHHhhcCCCcEEEeecCCCCccccCCCCccccccccccccccccccchhHHHHHHHHH
Confidence 57899999999999999999999996 89999997666 77754 3678888888
Q ss_pred HHHHHHhh-cCCCCcEEEEEeChhHHHHHHHHH-hCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhh
Q 012190 230 ETVRREHA-SSPEKPIYLVGDSFGGCLALAVAA-RNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLS 307 (468)
Q Consensus 230 ~~i~~~~~-~~~~~~i~LvGhS~GG~ia~~~a~-~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (468)
.+++.+.. ..+.++++|+||||||.+|+.+|. ++|++++++|+++|......
T Consensus 103 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~-------------------------- 156 (226)
T 3cn9_A 103 ALIDEQRAKGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFD-------------------------- 156 (226)
T ss_dssp HHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGGGG--------------------------
T ss_pred HHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCCch--------------------------
Confidence 88888643 123468999999999999999999 99999999999998432100
Q ss_pred hhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEe
Q 012190 308 YVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLAS 387 (468)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G 387 (468)
.+ . + ....+++|+|+++|
T Consensus 157 -------------------------~~--~--------------~---------------------~~~~~~~P~lii~G 174 (226)
T 3cn9_A 157 -------------------------DL--A--------------L---------------------DERHKRIPVLHLHG 174 (226)
T ss_dssp -------------------------GC--C--------------C---------------------CTGGGGCCEEEEEE
T ss_pred -------------------------hh--h--------------h---------------------cccccCCCEEEEec
Confidence 00 0 0 01456789999999
Q ss_pred CCCCCCCcHHHHHHHHHhCC----CcEEEEeCCCCccccccCcHHHHHHHHh
Q 012190 388 GKDNMLPSEDEAKRLNNSLQ----NCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (468)
Q Consensus 388 ~~D~~v~~~~~~~~l~~~l~----~~~~~~i~~aGH~~~~e~p~~~~~~I~~ 435 (468)
++|.++|++ ..+.+.+.++ ++++++++ +||.++.+.++++.+.|.+
T Consensus 175 ~~D~~~~~~-~~~~~~~~l~~~g~~~~~~~~~-~gH~~~~~~~~~i~~~l~~ 224 (226)
T 3cn9_A 175 SQDDVVDPA-LGRAAHDALQAQGVEVGWHDYP-MGHEVSLEEIHDIGAWLRK 224 (226)
T ss_dssp TTCSSSCHH-HHHHHHHHHHHTTCCEEEEEES-CCSSCCHHHHHHHHHHHHH
T ss_pred CCCCccCHH-HHHHHHHHHHHcCCceeEEEec-CCCCcchhhHHHHHHHHHh
Confidence 999999998 6888888876 58999999 9999998888877777663
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} | Back alignment and structure |
|---|
Probab=99.84 E-value=5.7e-20 Score=177.74 Aligned_cols=167 Identities=14% Similarity=0.139 Sum_probs=134.1
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhc--------CCCCcEEEEE
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHAS--------SPEKPIYLVG 248 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~--------~~~~~i~LvG 248 (468)
+.|+||++||++++...|..+.+.| .++|.|+++|+||+|.+... ..+|+...++.+... .+..+++++|
T Consensus 95 ~~p~vv~~HG~~~~~~~~~~~~~~la~~G~~vv~~d~~g~g~s~~~-~~~d~~~~~~~l~~~~~~~~~~~~~~~~v~l~G 173 (306)
T 3vis_A 95 TYGAIAISPGYTGTQSSIAWLGERIASHGFVVIAIDTNTTLDQPDS-RARQLNAALDYMLTDASSAVRNRIDASRLAVMG 173 (306)
T ss_dssp CEEEEEEECCTTCCHHHHHHHHHHHHTTTEEEEEECCSSTTCCHHH-HHHHHHHHHHHHHHTSCHHHHTTEEEEEEEEEE
T ss_pred CCCEEEEeCCCcCCHHHHHHHHHHHHhCCCEEEEecCCCCCCCcch-HHHHHHHHHHHHHhhcchhhhccCCcccEEEEE
Confidence 4789999999999999999999999 55799999999999998532 224444444444332 2346899999
Q ss_pred eChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChh
Q 012190 249 DSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPR 328 (468)
Q Consensus 249 hS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (468)
|||||.+++.+|.++|+ ++++|+++|...
T Consensus 174 ~S~GG~~a~~~a~~~p~-v~~~v~~~~~~~-------------------------------------------------- 202 (306)
T 3vis_A 174 HSMGGGGTLRLASQRPD-LKAAIPLTPWHL-------------------------------------------------- 202 (306)
T ss_dssp ETHHHHHHHHHHHHCTT-CSEEEEESCCCS--------------------------------------------------
T ss_pred EChhHHHHHHHHhhCCC-eeEEEEeccccC--------------------------------------------------
Confidence 99999999999999987 999999887431
Q ss_pred HHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCC
Q 012190 329 IKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQN 408 (468)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~ 408 (468)
...+..+++|+|+++|++|.+++++...+.+.+.+++
T Consensus 203 -------------------------------------------~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~l~~ 239 (306)
T 3vis_A 203 -------------------------------------------NKSWRDITVPTLIIGAEYDTIASVTLHSKPFYNSIPS 239 (306)
T ss_dssp -------------------------------------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHTCCT
T ss_pred -------------------------------------------ccccccCCCCEEEEecCCCcccCcchhHHHHHHHhcc
Confidence 0123567899999999999999987228888888874
Q ss_pred ---cEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 409 ---CIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 409 ---~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
.++++++++||+.+.+.++++.+.+. +|+++
T Consensus 240 ~~~~~~~~~~g~gH~~~~~~~~~~~~~i~--~fl~~ 273 (306)
T 3vis_A 240 PTDKAYLELDGASHFAPNITNKTIGMYSV--AWLKR 273 (306)
T ss_dssp TSCEEEEEETTCCTTGGGSCCHHHHHHHH--HHHHH
T ss_pred CCCceEEEECCCCccchhhchhHHHHHHH--HHHHH
Confidence 57999999999999999999999998 45544
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=4.5e-20 Score=168.05 Aligned_cols=169 Identities=14% Similarity=0.144 Sum_probs=135.9
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhc---CCeEEEEecCC-------------------CCCCC------ChHHHHHHHH
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLG---KAFEVRCLHIP-------------------VYDRT------PFEGLVKFVE 229 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~---~~~~V~~~D~~-------------------G~G~S------s~~~~~~dl~ 229 (468)
+.|+|||+||++++...|..+.+.|. .+|.|+++|+| |+|.+ ++++.++++.
T Consensus 13 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~~~~~~~~~~~~~~ 92 (218)
T 1auo_A 13 ADACVIWLHGLGADRYDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELEVSAKMVT 92 (218)
T ss_dssp CSEEEEEECCTTCCTTTTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHHHHHHHHHHH
T ss_pred CCcEEEEEecCCCChhhHHHHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCcccccchHHHHHHHHHHH
Confidence 47899999999999999999999995 78999997665 56654 2677888888
Q ss_pred HHHHHHhhc-CCCCcEEEEEeChhHHHHHHHHH-hCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhh
Q 012190 230 ETVRREHAS-SPEKPIYLVGDSFGGCLALAVAA-RNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLS 307 (468)
Q Consensus 230 ~~i~~~~~~-~~~~~i~LvGhS~GG~ia~~~a~-~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (468)
.+++.+... .+.++++++||||||.+|+.+|. ++|++++++|+++|.... . .++
T Consensus 93 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~--~----------~~~------------ 148 (218)
T 1auo_A 93 DLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPT--F----------GDE------------ 148 (218)
T ss_dssp HHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTT--C----------CTT------------
T ss_pred HHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCC--c----------hhh------------
Confidence 888886431 23458999999999999999999 999999999999985532 0 000
Q ss_pred hhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEe
Q 012190 308 YVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLAS 387 (468)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G 387 (468)
.. + ....+++|+|+++|
T Consensus 149 ---------------~~---------------------------~---------------------~~~~~~~P~l~i~G 165 (218)
T 1auo_A 149 ---------------LE---------------------------L---------------------SASQQRIPALCLHG 165 (218)
T ss_dssp ---------------CC---------------------------C---------------------CHHHHTCCEEEEEE
T ss_pred ---------------hh---------------------------h---------------------hhcccCCCEEEEEe
Confidence 00 0 00345789999999
Q ss_pred CCCCCCCcHHHHHHHHHhCC----CcEEEEeCCCCccccccCcHHHHHHHHh
Q 012190 388 GKDNMLPSEDEAKRLNNSLQ----NCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (468)
Q Consensus 388 ~~D~~v~~~~~~~~l~~~l~----~~~~~~i~~aGH~~~~e~p~~~~~~I~~ 435 (468)
++|.+++++ ..+.+.+.++ ++++++++ +||.++.+.++++.+.|.+
T Consensus 166 ~~D~~~~~~-~~~~~~~~l~~~g~~~~~~~~~-~gH~~~~~~~~~~~~~l~~ 215 (218)
T 1auo_A 166 QYDDVVQNA-MGRSAFEHLKSRGVTVTWQEYP-MGHEVLPQEIHDIGAWLAA 215 (218)
T ss_dssp TTCSSSCHH-HHHHHHHHHHTTTCCEEEEEES-CSSSCCHHHHHHHHHHHHH
T ss_pred CCCceecHH-HHHHHHHHHHhCCCceEEEEec-CCCccCHHHHHHHHHHHHH
Confidence 999999998 6888888886 48999999 9999999988888888773
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.83 E-value=3.2e-20 Score=176.83 Aligned_cols=192 Identities=15% Similarity=0.090 Sum_probs=136.2
Q ss_pred CCCeEEEeCCCC---CchhhHHHhHhhh-cCCeEEEEecCCCCCCC--ChHHHHHHHHHHHHHHhhc-----CCCCcEEE
Q 012190 178 GSPTLLFLPGID---GLGLGLILHHKPL-GKAFEVRCLHIPVYDRT--PFEGLVKFVEETVRREHAS-----SPEKPIYL 246 (468)
Q Consensus 178 ~~p~lV~lHG~~---~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S--s~~~~~~dl~~~i~~~~~~-----~~~~~i~L 246 (468)
+.|+||++||.+ ++...|..++..| ..+|.|+++|+||+|.+ +.....+|+.++++.+... ....+++|
T Consensus 49 ~~p~vv~lHGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l 128 (283)
T 3bjr_A 49 NLPAIIIVPGGSYTHIPVAQAESLAMAFAGHGYQAFYLEYTLLTDQQPLGLAPVLDLGRAVNLLRQHAAEWHIDPQQITP 128 (283)
T ss_dssp CEEEEEEECCSTTTCCCHHHHHHHHHHHHTTTCEEEEEECCCTTTCSSCBTHHHHHHHHHHHHHHHSHHHHTEEEEEEEE
T ss_pred CCcEEEEECCCccccCCccccHHHHHHHHhCCcEEEEEeccCCCccccCchhHHHHHHHHHHHHHHHHHHhCCCcccEEE
Confidence 578999999944 5667788899999 56799999999999998 7777777777777665532 12348999
Q ss_pred EEeChhHHHHHHHHHhCCCC-------------ceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCCh
Q 012190 247 VGDSFGGCLALAVAARNPTI-------------DLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDP 313 (468)
Q Consensus 247 vGhS~GG~ia~~~a~~~P~~-------------v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (468)
+||||||.+|+.+|.++|+. ++++|+++|.......... . . ..
T Consensus 129 ~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~-~---~------------~~-------- 184 (283)
T 3bjr_A 129 AGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNVVLGYPVISPLLGFPK-D---D------------AT-------- 184 (283)
T ss_dssp EEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHCCSSEEEESCCCCTTSBC------------------------------
T ss_pred EEECHHHHHHHHHHhhccccchhhcCCCcCCCCccEEEEcCCcccccccccc-c---c------------ch--------
Confidence 99999999999999999987 9999999886543211000 0 0 00
Q ss_pred hhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCC
Q 012190 314 IKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNML 393 (468)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v 393 (468)
...+...+ .. ......+..+.+|+|+++|++|.++
T Consensus 185 -----------------~~~~~~~~--------------~~--------------~~~~~~~~~~~~P~lii~G~~D~~~ 219 (283)
T 3bjr_A 185 -----------------LATWTPTP--------------NE--------------LAADQHVNSDNQPTFIWTTADDPIV 219 (283)
T ss_dssp -------------------CCCCCG--------------GG--------------GCGGGSCCTTCCCEEEEEESCCTTS
T ss_pred -----------------HHHHHHHh--------------Hh--------------cCHHHhccCCCCCEEEEEcCCCCCC
Confidence 00000000 00 0001234677899999999999999
Q ss_pred CcHHHHHHHHHhCC----CcEEEEeCCCCccccccCc-------------HHHHHHHHhcCcccc
Q 012190 394 PSEDEAKRLNNSLQ----NCIVRNFKDNGHTLLLEEG-------------ISLLTIIKGTCKYRR 441 (468)
Q Consensus 394 ~~~~~~~~l~~~l~----~~~~~~i~~aGH~~~~e~p-------------~~~~~~I~~~~F~~r 441 (468)
|++ ..+.+.+.++ ++++++++++||.+..+.+ +++.+.+. +|+++
T Consensus 220 p~~-~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~fl~~ 281 (283)
T 3bjr_A 220 PAT-NTLAYATALATAKIPYELHVFKHGPHGLALANAQTAWKPDANQPHVAHWLTLAL--EWLAD 281 (283)
T ss_dssp CTH-HHHHHHHHHHHTTCCEEEEEECCCSHHHHHHHHHHSCC-------CCHHHHHHH--HHHHH
T ss_pred ChH-HHHHHHHHHHHCCCCeEEEEeCCCCcccccccccccccccccchhHHHHHHHHH--HHHhh
Confidence 998 6888887775 4699999999998777765 56666666 45543
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.83 E-value=2.6e-20 Score=171.08 Aligned_cols=165 Identities=19% Similarity=0.195 Sum_probs=130.2
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEe--cCCCCCCC-----------ChHHHHH---HHHHHHHHHhhcC--
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCL--HIPVYDRT-----------PFEGLVK---FVEETVRREHASS-- 239 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~--D~~G~G~S-----------s~~~~~~---dl~~~i~~~~~~~-- 239 (468)
+.|+||++||++++...|..+.+.|..+|.|+++ |+||+|.| +.+++.+ ++.++++.+....
T Consensus 37 ~~~~vv~~HG~~~~~~~~~~~~~~l~~g~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 116 (226)
T 2h1i_A 37 SKPVLLLLHGTGGNELDLLPLAEIVDSEASVLSVRGNVLENGMPRFFRRLAEGIFDEEDLIFRTKELNEFLDEAAKEYKF 116 (226)
T ss_dssp TSCEEEEECCTTCCTTTTHHHHHHHHTTSCEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCcEEEEEecCCCChhHHHHHHHHhccCceEEEecCcccCCcchhhccccCccCcChhhHHHHHHHHHHHHHHHHhhcCC
Confidence 5789999999999999999999999779999999 89999976 3444444 4445554444333
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHH
Q 012190 240 PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMV 319 (468)
Q Consensus 240 ~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (468)
...+++++||||||.+++.+|.++|++++++|+++|......
T Consensus 117 ~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~-------------------------------------- 158 (226)
T 2h1i_A 117 DRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRG-------------------------------------- 158 (226)
T ss_dssp CTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSS--------------------------------------
T ss_pred CcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCCCCCcCc--------------------------------------
Confidence 457999999999999999999999999999999998642210
Q ss_pred hhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHH
Q 012190 320 NIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEA 399 (468)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~ 399 (468)
......+++|+++++|++|.+++.+ ..
T Consensus 159 ----------------------------------------------------~~~~~~~~~p~l~~~G~~D~~~~~~-~~ 185 (226)
T 2h1i_A 159 ----------------------------------------------------MQLANLAGKSVFIAAGTNDPICSSA-ES 185 (226)
T ss_dssp ----------------------------------------------------CCCCCCTTCEEEEEEESSCSSSCHH-HH
T ss_pred ----------------------------------------------------cccccccCCcEEEEeCCCCCcCCHH-HH
Confidence 0011335789999999999999998 68
Q ss_pred HHHHHhCC----CcEEEEeCCCCccccccCcHHHHHHHH
Q 012190 400 KRLNNSLQ----NCIVRNFKDNGHTLLLEEGISLLTIIK 434 (468)
Q Consensus 400 ~~l~~~l~----~~~~~~i~~aGH~~~~e~p~~~~~~I~ 434 (468)
+.+.+.++ +.++ +++++||....+.++.+.+.|.
T Consensus 186 ~~~~~~l~~~~~~~~~-~~~~~gH~~~~~~~~~~~~~l~ 223 (226)
T 2h1i_A 186 EELKVLLENANANVTM-HWENRGHQLTMGEVEKAKEWYD 223 (226)
T ss_dssp HHHHHHHHTTTCEEEE-EEESSTTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEE-EeCCCCCCCCHHHHHHHHHHHH
Confidence 88888776 3455 9999999998777777766665
|
| >1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=3.9e-20 Score=180.75 Aligned_cols=166 Identities=13% Similarity=0.125 Sum_probs=132.3
Q ss_pred CCCeEEEeCCCCCchhhHH-------HhHhhh-cCCeEEEEecCCCCCCCCh----------------------------
Q 012190 178 GSPTLLFLPGIDGLGLGLI-------LHHKPL-GKAFEVRCLHIPVYDRTPF---------------------------- 221 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~-------~~~~~L-~~~~~V~~~D~~G~G~Ss~---------------------------- 221 (468)
.+++|||+||++.+...|. .++..| .++|.|+++|+||||+|+.
T Consensus 61 ~~~~vvl~HG~g~~~~~~~~~pdg~~~~~~~l~~~G~~V~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (328)
T 1qlw_A 61 KRYPITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLGKAPASSLPDLFAAGHEA 140 (328)
T ss_dssp CSSCEEEECCTTCCGGGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHTTSSCGGGSCCCBCCCHHH
T ss_pred CCccEEEEeCCCCCCCccccCCCCchHHHHHHHHCCCeEEEECCCCcccCCCCCcccccccccccCcccccceeccchhh
Confidence 3578999999999999998 477877 6789999999999999842
Q ss_pred -------------------------HH------------------HHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHH
Q 012190 222 -------------------------EG------------------LVKFVEETVRREHASSPEKPIYLVGDSFGGCLALA 258 (468)
Q Consensus 222 -------------------------~~------------------~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~ 258 (468)
++ +++++..+++.+ . +++|+||||||.+++.
T Consensus 141 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~----~--~~~lvGhS~GG~~a~~ 214 (328)
T 1qlw_A 141 AWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKL----D--GTVLLSHSQSGIYPFQ 214 (328)
T ss_dssp HHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHHH----T--SEEEEEEGGGTTHHHH
T ss_pred hhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHHHHHHHHHh----C--CceEEEECcccHHHHH
Confidence 22 455566666553 2 8999999999999999
Q ss_pred HHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhc
Q 012190 259 VAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNL 338 (468)
Q Consensus 259 ~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (468)
+|.++|++++++|+++|.... + .
T Consensus 215 ~a~~~p~~v~~~v~~~p~~~~---------------------------------~-----------------~------- 237 (328)
T 1qlw_A 215 TAAMNPKGITAIVSVEPGECP---------------------------------K-----------------P------- 237 (328)
T ss_dssp HHHHCCTTEEEEEEESCSCCC---------------------------------C-----------------G-------
T ss_pred HHHhChhheeEEEEeCCCCCC---------------------------------C-----------------H-------
Confidence 999999999999999874300 0 0
Q ss_pred chhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCc-----HHHHHHHHHhCC----Cc
Q 012190 339 PALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPS-----EDEAKRLNNSLQ----NC 409 (468)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~-----~~~~~~l~~~l~----~~ 409 (468)
......+++|+|+++|++|.++++ + ..+.+.+.++ ++
T Consensus 238 ---------------------------------~~~~~~~~~PvLii~G~~D~~~p~~~~~~~-~~~~~~~~l~~~g~~~ 283 (328)
T 1qlw_A 238 ---------------------------------EDVKPLTSIPVLVVFGDHIEEFPRWAPRLK-ACHAFIDALNAAGGKG 283 (328)
T ss_dssp ---------------------------------GGCGGGTTSCEEEEECSSCTTCTTTHHHHH-HHHHHHHHHHHTTCCE
T ss_pred ---------------------------------HHHhhccCCCEEEEeccCCccccchhhHHH-HHHHHHHHHHHhCCCc
Confidence 001123578999999999999997 6 6888888776 88
Q ss_pred EEEEeCCCC-----ccccccC-cHHHHHHHHhcCccccc
Q 012190 410 IVRNFKDNG-----HTLLLEE-GISLLTIIKGTCKYRRS 442 (468)
Q Consensus 410 ~~~~i~~aG-----H~~~~e~-p~~~~~~I~~~~F~~r~ 442 (468)
++++++++| |+++.|. ++++.+.|. +|+.+.
T Consensus 284 ~~~~~~~~gi~G~~H~~~~~~~~~~~~~~i~--~fl~~~ 320 (328)
T 1qlw_A 284 QLMSLPALGVHGNSHMMMQDRNNLQVADLIL--DWIGRN 320 (328)
T ss_dssp EEEEGGGGTCCCCCTTGGGSTTHHHHHHHHH--HHHHHT
T ss_pred eEEEcCCCCcCCCcccchhccCHHHHHHHHH--HHHHhc
Confidence 999999666 9999998 999999999 566543
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.83 E-value=5.6e-20 Score=185.00 Aligned_cols=227 Identities=11% Similarity=0.086 Sum_probs=142.4
Q ss_pred CCCeEEEeCCCCCchhhHHHhH--hhhcCCeEEEEecCCCCCCCC------hHHHHHHHHHHHHHHhhcCCCCcEEEEEe
Q 012190 178 GSPTLLFLPGIDGLGLGLILHH--KPLGKAFEVRCLHIPVYDRTP------FEGLVKFVEETVRREHASSPEKPIYLVGD 249 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~--~~L~~~~~V~~~D~~G~G~Ss------~~~~~~dl~~~i~~~~~~~~~~~i~LvGh 249 (468)
..|+|||+||++++...|.... ..+..+|.|+++|+||||.|+ ..++.+|+..+++.+.... .+++|+||
T Consensus 158 ~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~~~~~l~~~~--~~v~l~G~ 235 (405)
T 3fnb_A 158 AQDTLIVVGGGDTSREDLFYMLGYSGWEHDYNVLMVDLPGQGKNPNQGLHFEVDARAAISAILDWYQAPT--EKIAIAGF 235 (405)
T ss_dssp CCCEEEEECCSSCCHHHHHHHTHHHHHHTTCEEEEECCTTSTTGGGGTCCCCSCTHHHHHHHHHHCCCSS--SCEEEEEE
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHhCCcEEEEEcCCCCcCCCCCCCCCCccHHHHHHHHHHHHHhcC--CCEEEEEE
Confidence 3589999999999999987665 455889999999999999983 2355788888888865432 68999999
Q ss_pred ChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhH
Q 012190 250 SFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRI 329 (468)
Q Consensus 250 S~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (468)
||||.+++.+|.++| +++++|+++|...... .....++.... .+..+.... .......+..
T Consensus 236 S~GG~~a~~~a~~~p-~v~~~v~~~p~~~~~~-------~~~~~~~~~~~--~p~~~~~~~--------~~~~~~~~~~- 296 (405)
T 3fnb_A 236 SGGGYFTAQAVEKDK-RIKAWIASTPIYDVAE-------VFRISFSTALK--APKTILKWG--------SKLVTSVNKV- 296 (405)
T ss_dssp TTHHHHHHHHHTTCT-TCCEEEEESCCSCHHH-------HHHHHCC----------------------------CCCHH-
T ss_pred ChhHHHHHHHHhcCc-CeEEEEEecCcCCHHH-------HHHHhhhhhhh--CcHHHHHHH--------HHHhhccchh-
Confidence 999999999999998 8999999998663311 00011110000 000000000 0000000000
Q ss_pred HhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC--
Q 012190 330 KLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ-- 407 (468)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~-- 407 (468)
......... ..+...........+..... ...+.++++|+|+|+|++|.+++++ ..+.+.+.++
T Consensus 297 -~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~--~~~l~~i~~PvLii~G~~D~~v~~~-~~~~l~~~l~~~ 362 (405)
T 3fnb_A 297 -AEVNLNKYA----------WQFGQVDFITSVNEVLEQAQ--IVDYNKIDVPSLFLVGAGEDSELMR-QSQVLYDNFKQR 362 (405)
T ss_dssp -HHHHHHHHH----------HHHTSSSHHHHHHHHHHHCC--CCCGGGCCSCEEEEEETTSCHHHHH-HHHHHHHHHHHT
T ss_pred -HHHHHHHhh----------hhcCCCCHHHHHHHHHHhhc--ccCHhhCCCCEEEEecCCCcCCChH-HHHHHHHHhccC
Confidence 000000000 00111111111111111000 1126788999999999999999988 7888888774
Q ss_pred --CcEEEEe---CCCCccccccCcHHHHHHHHhcCcccc
Q 012190 408 --NCIVRNF---KDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 408 --~~~~~~i---~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
+++++++ +++||.++.+.++.+.+.|. +|+.+
T Consensus 363 ~~~~~l~~~~~~~h~gh~~~~~~~~~~~~~i~--~fL~~ 399 (405)
T 3fnb_A 363 GIDVTLRKFSSESGADAHCQVNNFRLMHYQVF--EWLNH 399 (405)
T ss_dssp TCCEEEEEECTTTTCCSGGGGGGHHHHHHHHH--HHHHH
T ss_pred CCCceEEEEcCCccchhccccchHHHHHHHHH--HHHHH
Confidence 5689999 66778899999999999999 45543
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.2e-19 Score=166.09 Aligned_cols=163 Identities=15% Similarity=0.173 Sum_probs=125.9
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCCC------------------hHHHHHHHHHHHHHHhhc
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTP------------------FEGLVKFVEETVRREHAS 238 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss------------------~~~~~~dl~~~i~~~~~~ 238 (468)
..|+||++||++++...|..+++.| ..+|.|+++|+||+|.++ .+...+|+.++++.+...
T Consensus 31 ~~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 110 (241)
T 3f67_A 31 PLPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPELYFRQGDPNEYHDIPTLFKELVSKVPDAQVLADLDHVASWAARH 110 (241)
T ss_dssp CEEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECTTTTTCCGGGCCSHHHHHHHTGGGSCHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecccccCCCCCchhhHHHHHHHhhhcCCchhhHHHHHHHHHHHHhc
Confidence 3689999999999999999999999 678999999999997662 245688899998887654
Q ss_pred C-CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHH
Q 012190 239 S-PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMA 317 (468)
Q Consensus 239 ~-~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (468)
. ..++++++||||||.+++.++.++|+ +.++|++.+........+.
T Consensus 111 ~~d~~~i~l~G~S~Gg~~a~~~a~~~~~-~~~~v~~~~~~~~~~~~~~-------------------------------- 157 (241)
T 3f67_A 111 GGDAHRLLITGFCWGGRITWLYAAHNPQ-LKAAVAWYGKLVGEKSLNS-------------------------------- 157 (241)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHTTCTT-CCEEEEESCCCSCCCCSSS--------------------------------
T ss_pred cCCCCeEEEEEEcccHHHHHHHHhhCcC-cceEEEEeccccCCCccCC--------------------------------
Confidence 2 14589999999999999999999987 6677776553211100000
Q ss_pred HHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHH
Q 012190 318 MVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSED 397 (468)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~ 397 (468)
.... ...+.++++|+|+++|++|.+++++
T Consensus 158 -----------------------------------~~~~---------------~~~~~~~~~P~l~~~g~~D~~~~~~- 186 (241)
T 3f67_A 158 -----------------------------------PKHP---------------VDIAVDLNAPVLGLYGAKDASIPQD- 186 (241)
T ss_dssp -----------------------------------CCCH---------------HHHGGGCCSCEEEEEETTCTTSCHH-
T ss_pred -----------------------------------ccCH---------------HHhhhhcCCCEEEEEecCCCCCCHH-
Confidence 0000 0233667899999999999999998
Q ss_pred HHHHHHHhC----CCcEEEEeCCCCcccccc
Q 012190 398 EAKRLNNSL----QNCIVRNFKDNGHTLLLE 424 (468)
Q Consensus 398 ~~~~l~~~l----~~~~~~~i~~aGH~~~~e 424 (468)
..+.+.+.+ +++++++++++||.+..+
T Consensus 187 ~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~ 217 (241)
T 3f67_A 187 TVETMRQALRAANATAEIVVYPEADHAFNAD 217 (241)
T ss_dssp HHHHHHHHHHHTTCSEEEEEETTCCTTTTCT
T ss_pred HHHHHHHHHHHcCCCcEEEEECCCCcceecC
Confidence 688888776 688999999999998753
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A | Back alignment and structure |
|---|
Probab=99.82 E-value=9.4e-20 Score=175.68 Aligned_cols=205 Identities=14% Similarity=0.133 Sum_probs=136.5
Q ss_pred CCCeEEEeCCCCCch--hhHHHhHhhhcCCeEEEEecCCCCCCC-----ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeC
Q 012190 178 GSPTLLFLPGIDGLG--LGLILHHKPLGKAFEVRCLHIPVYDRT-----PFEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~--~~~~~~~~~L~~~~~V~~~D~~G~G~S-----s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS 250 (468)
++|+|||+||++++. ..|..+...|..+|+|+++|+||||.| +++++++++.+.+... .+..+++|+|||
T Consensus 66 ~~~~lvllhG~~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~a~~~~~~l~~~---~~~~~~~LvGhS 142 (300)
T 1kez_A 66 GEVTVICCAGTAAISGPHEFTRLAGALRGIAPVRAVPQPGYEEGEPLPSSMAAVAAVQADAVIRT---QGDKPFVVAGHS 142 (300)
T ss_dssp CSSEEEECCCSSTTCSTTTTHHHHHHTSSSCCBCCCCCTTSSTTCCBCSSHHHHHHHHHHHHHHH---CSSCCEEEECCT
T ss_pred CCCeEEEECCCcccCcHHHHHHHHHhcCCCceEEEecCCCCCCCCCCCCCHHHHHHHHHHHHHHh---cCCCCEEEEEEC
Confidence 478999999999987 899999999988899999999999987 5788888877544321 455689999999
Q ss_pred hhHHHHHHHHHhCC---CCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCCh
Q 012190 251 FGGCLALAVAARNP---TIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPP 327 (468)
Q Consensus 251 ~GG~ia~~~a~~~P---~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (468)
|||.+|+.+|.++| ++++++|++++...... .... .....+...+.....
T Consensus 143 ~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~~-------~~~~-------~~~~~~~~~~~~~~~------------- 195 (300)
T 1kez_A 143 AGALMAYALATELLDRGHPPRGVVLIDVYPPGHQ-------DAMN-------AWLEELTATLFDRET------------- 195 (300)
T ss_dssp HHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTTC-------HHHH-------HHHHHHHGGGCCCCS-------------
T ss_pred HhHHHHHHHHHHHHhcCCCccEEEEECCCCCcch-------hHHH-------HHHHHHHHHHHhCcC-------------
Confidence 99999999999998 48999999998653211 0000 000000111100000
Q ss_pred hHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC
Q 012190 328 RIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ 407 (468)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~ 407 (468)
. .+....+........... ...+..+++|+|+|+|+ |..+++. . ..+.+..+
T Consensus 196 --------~--------------~~~~~~~~~~~~~~~~~~---~~~~~~i~~P~lii~G~-d~~~~~~-~-~~~~~~~~ 247 (300)
T 1kez_A 196 --------V--------------RMDDTRLTALGAYDRLTG---QWRPRETGLPTLLVSAG-EPMGPWP-D-DSWKPTWP 247 (300)
T ss_dssp --------S--------------CCCHHHHHHHHHHHHHTT---TCCCCCCSCCBEEEEES-SCSSCCC-S-SCCSCCCS
T ss_pred --------C--------------ccchHHHHHHHHHHHHHh---cCCCCCCCCCEEEEEeC-CCCCCCc-c-cchhhhcC
Confidence 0 000000000000000000 11347889999999995 6666665 3 33444455
Q ss_pred -CcEEEEeCCCCccccc-cCcHHHHHHHHhcCcccccC
Q 012190 408 -NCIVRNFKDNGHTLLL-EEGISLLTIIKGTCKYRRSR 443 (468)
Q Consensus 408 -~~~~~~i~~aGH~~~~-e~p~~~~~~I~~~~F~~r~~ 443 (468)
+++++++++ ||+.++ ++|+++++.|. .|+.+..
T Consensus 248 ~~~~~~~i~g-gH~~~~~e~~~~~~~~i~--~fl~~~~ 282 (300)
T 1kez_A 248 FEHDTVAVPG-DHFTMVQEHADAIARHID--AWLGGGN 282 (300)
T ss_dssp SCCEEEEESS-CTTTSSSSCSHHHHHHHH--HHHTCC-
T ss_pred CCCeEEEecC-CChhhccccHHHHHHHHH--HHHHhcc
Confidence 579999998 999997 99999999999 5665543
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=99.82 E-value=2.6e-19 Score=174.16 Aligned_cols=218 Identities=16% Similarity=0.099 Sum_probs=142.7
Q ss_pred ceeeeecCCCCCCCCCCeEEEeCCC--CCchhhHHHhHhhhcCCeEEEEecCCCCCCC-----ChHHHHHHHHHHHHHHh
Q 012190 164 PRWFCPVDCGRPLKGSPTLLFLPGI--DGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-----PFEGLVKFVEETVRREH 236 (468)
Q Consensus 164 ~~~~~y~~~g~~~~~~p~lV~lHG~--~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-----s~~~~~~dl~~~i~~~~ 236 (468)
+.+......+. +|+|||+||+ +++...|..+++.|..+|+|+++|+||||.+ +++++++++.+.++...
T Consensus 70 ~~~v~l~~~~~----~~~lv~lhG~~~~~~~~~~~~~~~~L~~~~~v~~~d~~G~G~~~~~~~~~~~~~~~~~~~l~~~~ 145 (319)
T 3lcr_A 70 PEIVRLGRGQL----GPQLILVCPTVMTTGPQVYSRLAEELDAGRRVSALVPPGFHGGQALPATLTVLVRSLADVVQAEV 145 (319)
T ss_dssp CEEEEESSCCS----SCEEEEECCSSTTCSGGGGHHHHHHHCTTSEEEEEECTTSSTTCCEESSHHHHHHHHHHHHHHHH
T ss_pred CcceEecCCCC----CCeEEEECCCCcCCCHHHHHHHHHHhCCCceEEEeeCCCCCCCCCCCCCHHHHHHHHHHHHHHhc
Confidence 34444444443 7899999995 7788899999999998999999999999987 47888888888888753
Q ss_pred hcCCCCcEEEEEeChhHHHHHHHHHhC---CCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCCh
Q 012190 237 ASSPEKPIYLVGDSFGGCLALAVAARN---PTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDP 313 (468)
Q Consensus 237 ~~~~~~~i~LvGhS~GG~ia~~~a~~~---P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (468)
+..+++|+||||||.+|+.+|.++ |+.+.++|++++....... .....+...+ ....+..
T Consensus 146 ---~~~~~~lvGhS~Gg~vA~~~A~~~~~~~~~v~~lvl~~~~~~~~~~--~~~~~~~~~~-------~~~~~~~----- 208 (319)
T 3lcr_A 146 ---ADGEFALAGHSSGGVVAYEVARELEARGLAPRGVVLIDSYSFDGDG--GRPEELFRSA-------LNERFVE----- 208 (319)
T ss_dssp ---TTSCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCCCCSSC--CHHHHHHHHH-------HHHHHHH-----
T ss_pred ---CCCCEEEEEECHHHHHHHHHHHHHHhcCCCccEEEEECCCCCCccc--hhhHHHHHHH-------HHHHHhh-----
Confidence 335899999999999999999988 8899999999986532211 0000111000 0000000
Q ss_pred hhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCC--cchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCC
Q 012190 314 IKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIP--KDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDN 391 (468)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~ 391 (468)
...+ .. +. ...+......+.... ......+++|+|+|+|++|
T Consensus 209 -----------------~~~~-~~--------------~~~~~~~l~~~~~~~~~~~---~~~~~~i~~PvLli~g~~~- 252 (319)
T 3lcr_A 209 -----------------YLRL-TG--------------GGNLSQRITAQVWCLELLR---GWRPEGLTAPTLYVRPAQP- 252 (319)
T ss_dssp -----------------HHHH-HC--------------CCCHHHHHHHHHHHHHHTT---TCCCCCCSSCEEEEEESSC-
T ss_pred -----------------hhcc-cC--------------CCchhHHHHHHHHHHHHHh---cCCCCCcCCCEEEEEeCCC-
Confidence 0000 00 00 000000000111000 1123678999999999885
Q ss_pred CCCcHHHHHHHHHhCC-CcEEEEeCCCCcccccc--CcHHHHHHHHhcCccccc
Q 012190 392 MLPSEDEAKRLNNSLQ-NCIVRNFKDNGHTLLLE--EGISLLTIIKGTCKYRRS 442 (468)
Q Consensus 392 ~v~~~~~~~~l~~~l~-~~~~~~i~~aGH~~~~e--~p~~~~~~I~~~~F~~r~ 442 (468)
.+++. ..+.+.+..+ ..+++.+++ +|+.+++ +|+++++.|. +|+.+.
T Consensus 253 ~~~~~-~~~~~~~~~~~~~~~~~~~g-~H~~~~~~~~~~~va~~i~--~fL~~~ 302 (319)
T 3lcr_A 253 LVEQE-KPEWRGDVLAAMGQVVEAPG-DHFTIIEGEHVASTAHIVG--DWLREA 302 (319)
T ss_dssp SSSCC-CTHHHHHHHHTCSEEEEESS-CTTGGGSTTTHHHHHHHHH--HHHHHH
T ss_pred CCCcc-cchhhhhcCCCCceEEEeCC-CcHHhhCcccHHHHHHHHH--HHHHhc
Confidence 45544 3666666665 578888885 8888886 9999999999 566543
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.6e-19 Score=171.14 Aligned_cols=180 Identities=15% Similarity=0.155 Sum_probs=131.4
Q ss_pred CCCCeEEEeCCC---CCchhhHHHhHhhh-cCCeEEEEecCCCCCC----CChHHHHHHHHHHHHHHhhcC-----CCCc
Q 012190 177 KGSPTLLFLPGI---DGLGLGLILHHKPL-GKAFEVRCLHIPVYDR----TPFEGLVKFVEETVRREHASS-----PEKP 243 (468)
Q Consensus 177 ~~~p~lV~lHG~---~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~----Ss~~~~~~dl~~~i~~~~~~~-----~~~~ 243 (468)
.+.|+||++||. .++...|..++..| ..+|.|+++|+||+|. +++....+|+..+++.+.... ...+
T Consensus 41 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~ 120 (276)
T 3hxk_A 41 YTFPAIIICPGGGYQHISQRESDPLALAFLAQGYQVLLLNYTVMNKGTNYNFLSQNLEEVQAVFSLIHQNHKEWQINPEQ 120 (276)
T ss_dssp CCBCEEEEECCSTTTSCCGGGSHHHHHHHHHTTCEEEEEECCCTTSCCCSCTHHHHHHHHHHHHHHHHHHTTTTTBCTTC
T ss_pred CCCCEEEEEcCCccccCCchhhHHHHHHHHHCCCEEEEecCccCCCcCCCCcCchHHHHHHHHHHHHHHhHHHcCCCcce
Confidence 357899999994 46666788888888 6789999999999999 567777888888877776542 3468
Q ss_pred EEEEEeChhHHHHHHHHHh-CCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhc
Q 012190 244 IYLVGDSFGGCLALAVAAR-NPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIE 322 (468)
Q Consensus 244 i~LvGhS~GG~ia~~~a~~-~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (468)
++|+||||||.+|+.+|.+ .+.+++++|+++|....... +...... . .+..+.
T Consensus 121 i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~~~~-~~~~~~~----~------------~~~~~~--------- 174 (276)
T 3hxk_A 121 VFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFTFG-WPSDLSH----F------------NFEIEN--------- 174 (276)
T ss_dssp CEEEEEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBTTSS-CSSSSSS----S------------CCCCSC---------
T ss_pred EEEEEeCHHHHHHHHHHhhccCCCccEEEEecCcccHHhh-CCcchhh----h------------hcCchh---------
Confidence 9999999999999999998 78999999999987653222 1000000 0 000000
Q ss_pred cCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHH
Q 012190 323 NRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRL 402 (468)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l 402 (468)
. .. +. ....+.++.+|+|+++|++|.++|.+ ..+.+
T Consensus 175 --------~----~~--------------~~-----------------~~~~~~~~~~P~lii~G~~D~~vp~~-~~~~~ 210 (276)
T 3hxk_A 175 --------I----SE--------------YN-----------------ISEKVTSSTPPTFIWHTADDEGVPIY-NSLKY 210 (276)
T ss_dssp --------C----GG--------------GB-----------------TTTTCCTTSCCEEEEEETTCSSSCTH-HHHHH
T ss_pred --------h----hh--------------CC-----------------hhhccccCCCCEEEEecCCCceeChH-HHHHH
Confidence 0 00 00 01234677899999999999999998 68888
Q ss_pred HHhCC----CcEEEEeCCCCccccccCc
Q 012190 403 NNSLQ----NCIVRNFKDNGHTLLLEEG 426 (468)
Q Consensus 403 ~~~l~----~~~~~~i~~aGH~~~~e~p 426 (468)
.+.++ ++++++++++||.+....+
T Consensus 211 ~~~l~~~~~~~~~~~~~~~~H~~~~~~~ 238 (276)
T 3hxk_A 211 CDRLSKHQVPFEAHFFESGPHGVSLANR 238 (276)
T ss_dssp HHHHHTTTCCEEEEEESCCCTTCTTCST
T ss_pred HHHHHHcCCCeEEEEECCCCCCccccCc
Confidence 77764 4599999999998877665
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.82 E-value=3.3e-19 Score=162.03 Aligned_cols=164 Identities=15% Similarity=0.132 Sum_probs=126.6
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEec-------------CCCCCCCC--------hHHHHHHHHHHHHHHh
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLH-------------IPVYDRTP--------FEGLVKFVEETVRREH 236 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D-------------~~G~G~Ss--------~~~~~~dl~~~i~~~~ 236 (468)
+.| |||+||++++...|..+.+.|..++.|+++| ++|+|.++ +++.++++.++++.+.
T Consensus 16 ~~p-vv~lHG~g~~~~~~~~~~~~l~~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (209)
T 3og9_A 16 LAP-LLLLHSTGGDEHQLVEIAEMIAPSHPILSIRGRINEQGVNRYFKLRGLGGFTKENFDLESLDEETDWLTDEVSLLA 94 (209)
T ss_dssp SCC-EEEECCTTCCTTTTHHHHHHHSTTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGBCHHHHHHHHHHHHHHHHHHH
T ss_pred CCC-EEEEeCCCCCHHHHHHHHHhcCCCceEEEecCCcCCCCcccceecccccccccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 467 9999999999999999999999899999999 78888652 4455566666666554
Q ss_pred hcC--CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChh
Q 012190 237 ASS--PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPI 314 (468)
Q Consensus 237 ~~~--~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (468)
... ..++++|+||||||.+|+.+|.++|++++++|++++.......
T Consensus 95 ~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~-------------------------------- 142 (209)
T 3og9_A 95 EKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDFE-------------------------------- 142 (209)
T ss_dssp HHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCCCC--------------------------------
T ss_pred HhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCccc--------------------------------
Confidence 332 2368999999999999999999999999999999874421000
Q ss_pred hHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCC
Q 012190 315 KMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLP 394 (468)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~ 394 (468)
......++|+++++|++|.++|
T Consensus 143 ----------------------------------------------------------~~~~~~~~p~li~~G~~D~~v~ 164 (209)
T 3og9_A 143 ----------------------------------------------------------QTVQLDDKHVFLSYAPNDMIVP 164 (209)
T ss_dssp ----------------------------------------------------------CCCCCTTCEEEEEECTTCSSSC
T ss_pred ----------------------------------------------------------ccccccCCCEEEEcCCCCCccC
Confidence 0013457899999999999999
Q ss_pred cHHHHHHHHHhCC----CcEEEEeCCCCccccccCcHHHHHHHH
Q 012190 395 SEDEAKRLNNSLQ----NCIVRNFKDNGHTLLLEEGISLLTIIK 434 (468)
Q Consensus 395 ~~~~~~~l~~~l~----~~~~~~i~~aGH~~~~e~p~~~~~~I~ 434 (468)
.+ ..+.+.+.++ ++++++++ +||.+..+..+++.+.|.
T Consensus 165 ~~-~~~~~~~~l~~~~~~~~~~~~~-~gH~~~~~~~~~~~~~l~ 206 (209)
T 3og9_A 165 QK-NFGDLKGDLEDSGCQLEIYESS-LGHQLTQEEVLAAKKWLT 206 (209)
T ss_dssp HH-HHHHHHHHHHHTTCEEEEEECS-STTSCCHHHHHHHHHHHH
T ss_pred HH-HHHHHHHHHHHcCCceEEEEcC-CCCcCCHHHHHHHHHHHH
Confidence 98 6888777664 36777787 799997666666655554
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 | Back alignment and structure |
|---|
Probab=99.81 E-value=4.3e-19 Score=177.27 Aligned_cols=218 Identities=16% Similarity=0.089 Sum_probs=143.2
Q ss_pred CCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC--------ChHHHHHHHHH
Q 012190 160 DGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT--------PFEGLVKFVEE 230 (468)
Q Consensus 160 dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S--------s~~~~~~dl~~ 230 (468)
||.....+.+.+.+. .+.|+||++||++++...|......| .++|.|+++|+||+|.| ++++.+.++.+
T Consensus 135 dg~~i~~~l~~p~~~--~~~P~vl~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~G~s~~~~~~~~~~~~~~~~~~~ 212 (386)
T 2jbw_A 135 DGIPMPVYVRIPEGP--GPHPAVIMLGGLESTKEESFQMENLVLDRGMATATFDGPGQGEMFEYKRIAGDYEKYTSAVVD 212 (386)
T ss_dssp TTEEEEEEEECCSSS--CCEEEEEEECCSSCCTTTTHHHHHHHHHTTCEEEEECCTTSGGGTTTCCSCSCHHHHHHHHHH
T ss_pred CCEEEEEEEEcCCCC--CCCCEEEEeCCCCccHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCCCccHHHHHHHHHH
Confidence 555433333444432 24789999999999988666667666 78999999999999987 24555666666
Q ss_pred HHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhc
Q 012190 231 TVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVM 310 (468)
Q Consensus 231 ~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (468)
++..... ...++++|+|||+||.+++.+|.+ |++++++|++ |........ ..++.... .......
T Consensus 213 ~l~~~~~-~~~~~i~l~G~S~GG~la~~~a~~-~~~~~a~v~~-~~~~~~~~~--------~~~~~~~~----~~~~~~~ 277 (386)
T 2jbw_A 213 LLTKLEA-IRNDAIGVLGRSLGGNYALKSAAC-EPRLAACISW-GGFSDLDYW--------DLETPLTK----ESWKYVS 277 (386)
T ss_dssp HHHHCTT-EEEEEEEEEEETHHHHHHHHHHHH-CTTCCEEEEE-SCCSCSTTG--------GGSCHHHH----HHHHHHT
T ss_pred HHHhCCC-cCcccEEEEEEChHHHHHHHHHcC-CcceeEEEEe-ccCChHHHH--------HhccHHHH----HHHHHHh
Confidence 6655211 123589999999999999999999 8999999999 765332110 01111100 0000000
Q ss_pred CChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCC
Q 012190 311 GDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKD 390 (468)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D 390 (468)
+. ..+. ... ...+.... ....+.++++|+|+++|++|
T Consensus 278 g~------------~~~~---------------------------~~~--~~~~~~~~--~~~~~~~i~~P~Lii~G~~D 314 (386)
T 2jbw_A 278 KV------------DTLE---------------------------EAR--LHVHAALE--TRDVLSQIACPTYILHGVHD 314 (386)
T ss_dssp TC------------SSHH---------------------------HHH--HHHHHHTC--CTTTGGGCCSCEEEEEETTS
T ss_pred CC------------CCHH---------------------------HHH--HHHHHhCC--hhhhhcccCCCEEEEECCCC
Confidence 00 0000 000 00111100 11345788999999999999
Q ss_pred CCCCcHHHHHHHHHhC-C-CcEEEEeCCCCccccccCcHHHHHHHHhcCccccc
Q 012190 391 NMLPSEDEAKRLNNSL-Q-NCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRS 442 (468)
Q Consensus 391 ~~v~~~~~~~~l~~~l-~-~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r~ 442 (468)
. +++. ..+.+.+.+ + ++++++++++||.. .+++.++.+.|. +|+++.
T Consensus 315 ~-v~~~-~~~~l~~~l~~~~~~~~~~~~~gH~~-~~~~~~~~~~i~--~fl~~~ 363 (386)
T 2jbw_A 315 E-VPLS-FVDTVLELVPAEHLNLVVEKDGDHCC-HNLGIRPRLEMA--DWLYDV 363 (386)
T ss_dssp S-SCTH-HHHHHHHHSCGGGEEEEEETTCCGGG-GGGTTHHHHHHH--HHHHHH
T ss_pred C-CCHH-HHHHHHHHhcCCCcEEEEeCCCCcCC-ccchHHHHHHHH--HHHHHh
Confidence 9 8998 799999999 7 89999999999965 678888888888 455543
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* | Back alignment and structure |
|---|
Probab=99.81 E-value=1e-18 Score=168.35 Aligned_cols=192 Identities=16% Similarity=0.107 Sum_probs=127.7
Q ss_pred CCCeEEEeCCCCCc-hhhHHHhHhhhcCCeEEEEecCCCCCCCCh-------------------------HHHHHHHHHH
Q 012190 178 GSPTLLFLPGIDGL-GLGLILHHKPLGKAFEVRCLHIPVYDRTPF-------------------------EGLVKFVEET 231 (468)
Q Consensus 178 ~~p~lV~lHG~~~s-~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss~-------------------------~~~~~dl~~~ 231 (468)
+.|+||++||++++ ...|.........+|.|+++|+||+|.|+. ...++|+.++
T Consensus 81 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~rg~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 160 (318)
T 1l7a_A 81 PHPAIVKYHGYNASYDGEIHEMVNWALHGYATFGMLVRGQQRSEDTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRA 160 (318)
T ss_dssp CEEEEEEECCTTCCSGGGHHHHHHHHHTTCEEEEECCTTTSSSCCCCCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHH
T ss_pred CccEEEEEcCCCCCCCCCcccccchhhCCcEEEEecCCCCCCCCCcccccCCccccceeccCCCHHHHHHHHHHHHHHHH
Confidence 46899999999999 888877764457899999999999998852 4678888888
Q ss_pred HHHHhhcCC--CCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhh
Q 012190 232 VRREHASSP--EKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYV 309 (468)
Q Consensus 232 i~~~~~~~~--~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (468)
++.+..... ..+++++|||+||.+|+.+|.++|+ +.++|+++|.... ..........
T Consensus 161 ~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~-~~~~v~~~p~~~~-------~~~~~~~~~~------------- 219 (318)
T 1l7a_A 161 LEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVADYPYLSN-------FERAIDVALE------------- 219 (318)
T ss_dssp HHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEESCCSCC-------HHHHHHHCCS-------------
T ss_pred HHHHHhCCCcccceeEEEecChHHHHHHHHhccCCC-ccEEEecCCcccC-------HHHHHhcCCc-------------
Confidence 888765422 3689999999999999999999986 7788888775321 1001000000
Q ss_pred cCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCC
Q 012190 310 MGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGK 389 (468)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~ 389 (468)
.++.. ...+..... ...........+... .....+..+++|+|+++|++
T Consensus 220 --~~~~~--------------~~~~~~~~~-------------~~~~~~~~~~~~~~~--~~~~~~~~~~~P~li~~g~~ 268 (318)
T 1l7a_A 220 --QPYLE--------------INSFFRRNG-------------SPETEVQAMKTLSYF--DIMNLADRVKVPVLMSIGLI 268 (318)
T ss_dssp --TTTTH--------------HHHHHHHSC-------------CHHHHHHHHHHHHTT--CHHHHGGGCCSCEEEEEETT
T ss_pred --CccHH--------------HHHHHhccC-------------CcccHHHHHHhhccc--cHHHHHhhCCCCEEEEeccC
Confidence 00000 000000000 000000000000000 01234567889999999999
Q ss_pred CCCCCcHHHHHHHHHhCCC-cEEEEeCCCCcccc
Q 012190 390 DNMLPSEDEAKRLNNSLQN-CIVRNFKDNGHTLL 422 (468)
Q Consensus 390 D~~v~~~~~~~~l~~~l~~-~~~~~i~~aGH~~~ 422 (468)
|.+++++ ..+.+.+.+++ +++++++++||...
T Consensus 269 D~~~~~~-~~~~~~~~l~~~~~~~~~~~~~H~~~ 301 (318)
T 1l7a_A 269 DKVTPPS-TVFAAYNHLETKKELKVYRYFGHEYI 301 (318)
T ss_dssp CSSSCHH-HHHHHHHHCCSSEEEEEETTCCSSCC
T ss_pred CCCCCcc-cHHHHHhhcCCCeeEEEccCCCCCCc
Confidence 9999998 79999999874 89999999999943
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.5e-19 Score=176.80 Aligned_cols=118 Identities=10% Similarity=-0.081 Sum_probs=91.2
Q ss_pred CCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHH-hHhhh-cCCeEEEEecCCCCCCCC--------hHHHHHH
Q 012190 158 KPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLIL-HHKPL-GKAFEVRCLHIPVYDRTP--------FEGLVKF 227 (468)
Q Consensus 158 ~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~-~~~~L-~~~~~V~~~D~~G~G~Ss--------~~~~~~d 227 (468)
..||.......+.+.+.+..+.|+||++||++++...|.. +...| ..+|.|+++|+||+|.|+ .+..++|
T Consensus 75 ~~~g~~~~~~~~~p~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~d 154 (367)
T 2hdw_A 75 NRYGITLAADLYLPKNRGGDRLPAIVIGGPFGAVKEQSSGLYAQTMAERGFVTLAFDPSYTGESGGQPRNVASPDINTED 154 (367)
T ss_dssp CTTSCEEEEEEEEESSCCSSCEEEEEEECCTTCCTTSHHHHHHHHHHHTTCEEEEECCTTSTTSCCSSSSCCCHHHHHHH
T ss_pred cCCCCEEEEEEEeCCCCCCCCCCEEEEECCCCCcchhhHHHHHHHHHHCCCEEEEECCCCcCCCCCcCccccchhhHHHH
Confidence 3445443333333433212346899999999999988875 77878 668999999999999884 5678888
Q ss_pred HHHHHHHHhhcC--CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCC
Q 012190 228 VEETVRREHASS--PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPA 276 (468)
Q Consensus 228 l~~~i~~~~~~~--~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~ 276 (468)
+.++++.+.... ...+++++|||+||.+++.+|.++| .++++|+++|.
T Consensus 155 ~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~~~~v~~~p~ 204 (367)
T 2hdw_A 155 FSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK-RVKAVVTSTMY 204 (367)
T ss_dssp HHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCC
T ss_pred HHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCC-CccEEEEeccc
Confidence 888888876542 2458999999999999999999998 69999999875
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.80 E-value=8.2e-19 Score=160.84 Aligned_cols=164 Identities=13% Similarity=0.081 Sum_probs=128.7
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCC--------CC-----C---ChHHHHHHHHHHHHHHhhc--C
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVY--------DR-----T---PFEGLVKFVEETVRREHAS--S 239 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~--------G~-----S---s~~~~~~dl~~~i~~~~~~--~ 239 (468)
++|+|||+||++++...|..+.+.|.++|.|+++|.|++ +. . ++.+.++++.++++.+... .
T Consensus 29 ~~p~vv~lHG~g~~~~~~~~~~~~l~~~~~vv~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 108 (223)
T 3b5e_A 29 SRECLFLLHGSGVDETTLVPLARRIAPTATLVAARGRIPQEDGFRWFERIDPTRFEQKSILAETAAFAAFTNEAAKRHGL 108 (223)
T ss_dssp CCCEEEEECCTTBCTTTTHHHHHHHCTTSEEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEEecCCCCHHHHHHHHHhcCCCceEEEeCCCCCcCCccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 468999999999999999999999988999999998763 11 1 2455667777777766443 2
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHH
Q 012190 240 PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMV 319 (468)
Q Consensus 240 ~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (468)
..++++|+||||||.+|+.+|.++|++++++|+++|...... +
T Consensus 109 ~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~-------------------------------~------ 151 (223)
T 3b5e_A 109 NLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDH-------------------------------V------ 151 (223)
T ss_dssp CGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCSS-------------------------------C------
T ss_pred CCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCccc-------------------------------c------
Confidence 346899999999999999999999999999999988542100 0
Q ss_pred hhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHH
Q 012190 320 NIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEA 399 (468)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~ 399 (468)
.....+++|+++++|++|.++|.+ ..
T Consensus 152 -----------------------------------------------------~~~~~~~~P~li~~G~~D~~v~~~-~~ 177 (223)
T 3b5e_A 152 -----------------------------------------------------PATDLAGIRTLIIAGAADETYGPF-VP 177 (223)
T ss_dssp -----------------------------------------------------CCCCCTTCEEEEEEETTCTTTGGG-HH
T ss_pred -----------------------------------------------------ccccccCCCEEEEeCCCCCcCCHH-HH
Confidence 001345789999999999999998 68
Q ss_pred HHHHHhCC----CcEEEEeCCCCccccccCcHHHHHHHH
Q 012190 400 KRLNNSLQ----NCIVRNFKDNGHTLLLEEGISLLTIIK 434 (468)
Q Consensus 400 ~~l~~~l~----~~~~~~i~~aGH~~~~e~p~~~~~~I~ 434 (468)
+ +.+.++ ++++++++ +||.+..+..+.+.+.|.
T Consensus 178 ~-~~~~l~~~g~~~~~~~~~-~gH~~~~~~~~~i~~~l~ 214 (223)
T 3b5e_A 178 A-LVTLLSRHGAEVDARIIP-SGHDIGDPDAAIVRQWLA 214 (223)
T ss_dssp H-HHHHHHHTTCEEEEEEES-CCSCCCHHHHHHHHHHHH
T ss_pred H-HHHHHHHCCCceEEEEec-CCCCcCHHHHHHHHHHHH
Confidence 7 877775 57999999 999998777666665555
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=3.4e-18 Score=162.00 Aligned_cols=178 Identities=13% Similarity=0.152 Sum_probs=117.5
Q ss_pred CCCeEEEeCC---CCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC--ChHHHHHHHHHHHHHHhhc-----CCCCcEEE
Q 012190 178 GSPTLLFLPG---IDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT--PFEGLVKFVEETVRREHAS-----SPEKPIYL 246 (468)
Q Consensus 178 ~~p~lV~lHG---~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S--s~~~~~~dl~~~i~~~~~~-----~~~~~i~L 246 (468)
+.|+||++|| ..++...|..++..| ..+|.|+++|+||||.+ .+....+|+.+.++.+... ...++++|
T Consensus 34 ~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l 113 (277)
T 3bxp_A 34 DYPIMIICPGGGFTYHSGREEAPIATRMMAAGMHTVVLNYQLIVGDQSVYPWALQQLGATIDWITTQASAHHVDCQRIIL 113 (277)
T ss_dssp CEEEEEEECCSTTTSCCCTTHHHHHHHHHHTTCEEEEEECCCSTTTCCCTTHHHHHHHHHHHHHHHHHHHHTEEEEEEEE
T ss_pred CccEEEEECCCccccCCCccchHHHHHHHHCCCEEEEEecccCCCCCccCchHHHHHHHHHHHHHhhhhhcCCChhheEE
Confidence 4789999999 667777888899888 57899999999997633 4445555655555554432 12358999
Q ss_pred EEeChhHHHHHHHHHhC--------------CCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCC
Q 012190 247 VGDSFGGCLALAVAARN--------------PTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGD 312 (468)
Q Consensus 247 vGhS~GG~ia~~~a~~~--------------P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (468)
+||||||.+|+.+|.++ |.+++++|+++|........ ... .. .
T Consensus 114 ~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~~~-~~~--------~~----~---------- 170 (277)
T 3bxp_A 114 AGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAIILGYPVIDLTAGF-PTT--------SA----A---------- 170 (277)
T ss_dssp EEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSEEEEESCCCBTTSSS-SSS--------HH----H----------
T ss_pred EEeCHHHHHHHHHHhhccCcccccccCcccccCCcCEEEEeCCcccCCCCC-CCc--------cc----c----------
Confidence 99999999999999985 78899999999876432110 000 00 0
Q ss_pred hhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCC
Q 012190 313 PIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNM 392 (468)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~ 392 (468)
...+..... .... ...+..+.+|+|+++|++|.+
T Consensus 171 ------------------~~~~~~~~~-----------~~~~-----------------~~~~~~~~~P~lii~G~~D~~ 204 (277)
T 3bxp_A 171 ------------------RNQITTDAR-----------LWAA-----------------QRLVTPASKPAFVWQTATDES 204 (277)
T ss_dssp ------------------HHHHCSCGG-----------GSBG-----------------GGGCCTTSCCEEEEECTTCCC
T ss_pred ------------------chhccchhh-----------hcCH-----------------hhccccCCCCEEEEeeCCCCc
Confidence 000000000 0000 123356678999999999999
Q ss_pred CCcHHHHHHHHHhCC----CcEEEEeCCCCccccccC
Q 012190 393 LPSEDEAKRLNNSLQ----NCIVRNFKDNGHTLLLEE 425 (468)
Q Consensus 393 v~~~~~~~~l~~~l~----~~~~~~i~~aGH~~~~e~ 425 (468)
+|++ ..+.+.+.++ ++++++++++||.+....
T Consensus 205 vp~~-~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~ 240 (277)
T 3bxp_A 205 VPPI-NSLKYVQAMLQHQVATAYHLFGSGIHGLALAN 240 (277)
T ss_dssp SCTH-HHHHHHHHHHHTTCCEEEEECCCC--------
T ss_pred cChH-HHHHHHHHHHHCCCeEEEEEeCCCCccccccc
Confidence 9998 6887877664 569999999999665554
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.79 E-value=3.7e-18 Score=158.00 Aligned_cols=170 Identities=19% Similarity=0.191 Sum_probs=128.4
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhcC------CeEEEEecCCCC-------------------CCC------ChHHHHH
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLGK------AFEVRCLHIPVY-------------------DRT------PFEGLVK 226 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~------~~~V~~~D~~G~-------------------G~S------s~~~~~~ 226 (468)
..|+|||+||++++...|..+...|.. ++.|+++|.|++ +.+ ++++.++
T Consensus 22 ~~p~vv~lHG~g~~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 101 (239)
T 3u0v_A 22 HSASLIFLHGSGDSGQGLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDCPEHLESIDVMCQ 101 (239)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSSSSSCCCHHHHHHHHH
T ss_pred CCcEEEEEecCCCchhhHHHHHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCCcccccchhhHHHHHH
Confidence 478999999999999999998888843 599999887532 222 3677788
Q ss_pred HHHHHHHHHhhc-CCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHH
Q 012190 227 FVEETVRREHAS-SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYL 305 (468)
Q Consensus 227 dl~~~i~~~~~~-~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (468)
++..++++.... .+.++++|+||||||.+|+.+|.++|+.++++|++++....... .
T Consensus 102 ~l~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~---------------~------- 159 (239)
T 3u0v_A 102 VLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASA---------------V------- 159 (239)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTTCH---------------H-------
T ss_pred HHHHHHHHHHHhCCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCchhH---------------H-------
Confidence 888888775422 24568999999999999999999999999999999875421100 0
Q ss_pred hhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCce-EEE
Q 012190 306 LSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAE-VLV 384 (468)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~P-vLl 384 (468)
... ......++| +|+
T Consensus 160 -------------------------~~~---------------------------------------~~~~~~~~pp~li 175 (239)
T 3u0v_A 160 -------------------------YQA---------------------------------------LQKSNGVLPELFQ 175 (239)
T ss_dssp -------------------------HHH---------------------------------------HHHCCSCCCCEEE
T ss_pred -------------------------HHH---------------------------------------HHhhccCCCCEEE
Confidence 000 001344667 999
Q ss_pred EEeCCCCCCCcHHHHHHHHHhCC----CcEEEEeCCCCccccccCcHHHHHHHH
Q 012190 385 LASGKDNMLPSEDEAKRLNNSLQ----NCIVRNFKDNGHTLLLEEGISLLTIIK 434 (468)
Q Consensus 385 I~G~~D~~v~~~~~~~~l~~~l~----~~~~~~i~~aGH~~~~e~p~~~~~~I~ 434 (468)
++|++|.+++.+ ..+.+.+.++ ++++++++++||.+..+..+.+.+.|.
T Consensus 176 ~~G~~D~~v~~~-~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~ 228 (239)
T 3u0v_A 176 CHGTADELVLHS-WAEETNSMLKSLGVTTKFHSFPNVYHELSKTELDILKLWIL 228 (239)
T ss_dssp EEETTCSSSCHH-HHHHHHHHHHHTTCCEEEEEETTCCSSCCHHHHHHHHHHHH
T ss_pred EeeCCCCccCHH-HHHHHHHHHHHcCCcEEEEEeCCCCCcCCHHHHHHHHHHHH
Confidence 999999999998 6777776664 789999999999998666666666665
|
| >3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.9e-18 Score=161.38 Aligned_cols=187 Identities=13% Similarity=0.142 Sum_probs=136.0
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhcC-C---eEEEEecCCCCCCC---------------------------ChHHHHH
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLGK-A---FEVRCLHIPVYDRT---------------------------PFEGLVK 226 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~-~---~~V~~~D~~G~G~S---------------------------s~~~~~~ 226 (468)
.+++|||+||++++...|..+++.|.+ + ++|+.+|.+++|.+ ++++.++
T Consensus 3 ~~~pvv~iHG~~~~~~~~~~~~~~L~~~~~~~~~vi~~~v~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~a~ 82 (250)
T 3lp5_A 3 RMAPVIMVPGSSASQNRFDSLITELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANIDKQAV 82 (250)
T ss_dssp SCCCEEEECCCGGGHHHHHHHHHHHHHHSSSCCCEEEEEECTTSCEEEEECCCTTCSSCEEEEEESCCCCSHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHhcCCCCceEEEEEEecCCeEEEeeecCCCCcCCeEEEEeccCCCcccCHHHHHH
Confidence 356799999999999999999999944 3 78998888777741 2466789
Q ss_pred HHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhC-----CCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhh
Q 012190 227 FVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARN-----PTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCA 301 (468)
Q Consensus 227 dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~-----P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (468)
++.++++.+....+.++++|+||||||.+++.++.++ |++|+++|+++++..........
T Consensus 83 ~l~~~~~~l~~~~~~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~~~~~--------------- 147 (250)
T 3lp5_A 83 WLNTAFKALVKTYHFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMESTSTTA--------------- 147 (250)
T ss_dssp HHHHHHHHHHTTSCCSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCCCSSC---------------
T ss_pred HHHHHHHHHHHHcCCCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCcccccccc---------------
Confidence 9999999988777788999999999999999999987 67899999998865332110000
Q ss_pred HHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCce
Q 012190 302 VPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAE 381 (468)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~P 381 (468)
..+ . .+.+ ... ...+.. ++|
T Consensus 148 ---------~~~---------------~-~~~l-----------------------------~~~-----~~~lp~-~vp 167 (250)
T 3lp5_A 148 ---------KTS---------------M-FKEL-----------------------------YRY-----RTGLPE-SLT 167 (250)
T ss_dssp ---------CCH---------------H-HHHH-----------------------------HHT-----GGGSCT-TCE
T ss_pred ---------cCH---------------H-HHHH-----------------------------Hhc-----cccCCC-Cce
Confidence 000 0 0000 000 123333 799
Q ss_pred EEEEEeC----CCCCCCcHHHHHHHHHhCCC--c--EEEEeC--CCCccccccCcHHHHHHHHhcCcccccC
Q 012190 382 VLVLASG----KDNMLPSEDEAKRLNNSLQN--C--IVRNFK--DNGHTLLLEEGISLLTIIKGTCKYRRSR 443 (468)
Q Consensus 382 vLlI~G~----~D~~v~~~~~~~~l~~~l~~--~--~~~~i~--~aGH~~~~e~p~~~~~~I~~~~F~~r~~ 443 (468)
+++|+|+ .|.++|.+ .++.+...+++ . +.+.+. +++|..+.++| ++.+.|. .|+....
T Consensus 168 vl~I~G~~~~~~Dg~Vp~~-sa~~l~~l~~~~~~~~~~~~v~g~~a~H~~l~e~~-~v~~~I~--~FL~~~~ 235 (250)
T 3lp5_A 168 VYSIAGTENYTSDGTVPYN-SVNYGKYIFQDQVKHFTEITVTGANTAHSDLPQNK-QIVSLIR--QYLLAET 235 (250)
T ss_dssp EEEEECCCCCCTTTBCCHH-HHTTHHHHHTTTSSEEEEEECTTTTBSSCCHHHHH-HHHHHHH--HHTSCCC
T ss_pred EEEEEecCCCCCCceeeHH-HHHHHHHHhcccccceEEEEEeCCCCchhcchhCH-HHHHHHH--HHHhccc
Confidence 9999999 99999998 57777666653 2 233443 57799999998 7888888 5665443
|
| >2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.1e-18 Score=168.79 Aligned_cols=101 Identities=20% Similarity=0.185 Sum_probs=83.9
Q ss_pred CCCeEEEeCCCC---CchhhHHHhHhhhcC--CeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhcC-----CCCcEEEE
Q 012190 178 GSPTLLFLPGID---GLGLGLILHHKPLGK--AFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASS-----PEKPIYLV 247 (468)
Q Consensus 178 ~~p~lV~lHG~~---~s~~~~~~~~~~L~~--~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~-----~~~~i~Lv 247 (468)
+.|+||++||.+ ++...|..++..|.. +|.|+++|+||+|++++....+|+.++++.+.... ..++++|+
T Consensus 72 ~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~g~~~~~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~ 151 (311)
T 2c7b_A 72 GLPAVLYYHGGGFVFGSIETHDHICRRLSRLSDSVVVSVDYRLAPEYKFPTAVEDAYAALKWVADRADELGVDPDRIAVA 151 (311)
T ss_dssp SEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTCEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEE
T ss_pred CCcEEEEECCCcccCCChhhhHHHHHHHHHhcCCEEEEecCCCCCCCCCCccHHHHHHHHHHHHhhHHHhCCCchhEEEE
Confidence 368999999998 888899999999954 89999999999999987777777776666554321 22589999
Q ss_pred EeChhHHHHHHHHHhCCC----CceEEEEeCCCCC
Q 012190 248 GDSFGGCLALAVAARNPT----IDLILILSNPATS 278 (468)
Q Consensus 248 GhS~GG~ia~~~a~~~P~----~v~~lVli~p~~~ 278 (468)
||||||.+|+.+|.++|+ .++++|+++|...
T Consensus 152 G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~ 186 (311)
T 2c7b_A 152 GDSAGGNLAAVVSILDRNSGEKLVKKQVLIYPVVN 186 (311)
T ss_dssp EETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCC
T ss_pred ecCccHHHHHHHHHHHHhcCCCCceeEEEECCccC
Confidence 999999999999988775 5999999998765
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.1e-18 Score=164.12 Aligned_cols=170 Identities=11% Similarity=0.013 Sum_probs=124.9
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC-ChHHHHHHHHHHHHH----HhhcCCCCcEEEEEeCh
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT-PFEGLVKFVEETVRR----EHASSPEKPIYLVGDSF 251 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S-s~~~~~~dl~~~i~~----~~~~~~~~~i~LvGhS~ 251 (468)
..|+|||+||++++...|..+++.| ..+|.|+++|+||.+.. ++....+.+.+.... +......++++|+||||
T Consensus 48 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~~s~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~l~G~S~ 127 (258)
T 2fx5_A 48 RHPVILWGNGTGAGPSTYAGLLSHWASHGFVVAAAETSNAGTGREMLACLDYLVRENDTPYGTYSGKLNTGRVGTSGHSQ 127 (258)
T ss_dssp CEEEEEEECCTTCCGGGGHHHHHHHHHHTCEEEEECCSCCTTSHHHHHHHHHHHHHHHSSSSTTTTTEEEEEEEEEEEEH
T ss_pred CceEEEEECCCCCCchhHHHHHHHHHhCCeEEEEecCCCCccHHHHHHHHHHHHhcccccccccccccCccceEEEEECh
Confidence 3689999999999999999999999 56899999999965322 122222222222210 01112235899999999
Q ss_pred hHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHh
Q 012190 252 GGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKL 331 (468)
Q Consensus 252 GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (468)
||.+++.+| .+++++++|+++|.... . +
T Consensus 128 GG~~a~~~a--~~~~v~~~v~~~~~~~~----------------------~----------~------------------ 155 (258)
T 2fx5_A 128 GGGGSIMAG--QDTRVRTTAPIQPYTLG----------------------L----------G------------------ 155 (258)
T ss_dssp HHHHHHHHT--TSTTCCEEEEEEECCSS----------------------T----------T------------------
T ss_pred HHHHHHHhc--cCcCeEEEEEecCcccc----------------------c----------c------------------
Confidence 999999888 56789999998763210 0 0
Q ss_pred hhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHH-HHHHHHhC-CCc
Q 012190 332 EQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDE-AKRLNNSL-QNC 409 (468)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~-~~~l~~~l-~~~ 409 (468)
+. ...+..+++|+|+|+|++|.++++. . .+.+.+.. +++
T Consensus 156 --------------------~~------------------~~~~~~i~~P~lii~G~~D~~~~~~-~~~~~~~~~~~~~~ 196 (258)
T 2fx5_A 156 --------------------HD------------------SASQRRQQGPMFLMSGGGDTIAFPY-LNAQPVYRRANVPV 196 (258)
T ss_dssp --------------------CC------------------GGGGGCCSSCEEEEEETTCSSSCHH-HHTHHHHHHCSSCE
T ss_pred --------------------cc------------------hhhhccCCCCEEEEEcCCCcccCch-hhHHHHHhccCCCe
Confidence 00 0234678899999999999999988 4 67777764 358
Q ss_pred EEEEeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 410 IVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 410 ~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
++++++++||+.+.++++++.+.|. +|++
T Consensus 197 ~~~~~~g~~H~~~~~~~~~~~~~i~--~fl~ 225 (258)
T 2fx5_A 197 FWGERRYVSHFEPVGSGGAYRGPST--AWFR 225 (258)
T ss_dssp EEEEESSCCTTSSTTTCGGGHHHHH--HHHH
T ss_pred EEEEECCCCCccccchHHHHHHHHH--HHHH
Confidence 9999999999999999999999999 4554
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=5e-18 Score=165.88 Aligned_cols=222 Identities=14% Similarity=0.034 Sum_probs=136.1
Q ss_pred cCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC-----Ch----------
Q 012190 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-----PF---------- 221 (468)
Q Consensus 157 ~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-----s~---------- 221 (468)
...||.......+.+.+. ....|+||++||++++...+.........+|.|+++|+||+|.| ..
T Consensus 74 ~~~dg~~i~~~~~~P~~~-~~~~p~vv~~HG~g~~~~~~~~~~~l~~~G~~v~~~d~rG~g~s~~~~~~~~~p~~~~~~~ 152 (337)
T 1vlq_A 74 SGYRGQRIKGWLLVPKLE-EEKLPCVVQYIGYNGGRGFPHDWLFWPSMGYICFVMDTRGQGSGWLKGDTPDYPEGPVDPQ 152 (337)
T ss_dssp ECGGGCEEEEEEEEECCS-CSSEEEEEECCCTTCCCCCGGGGCHHHHTTCEEEEECCTTCCCSSSCCCCCBCCSSSBCCC
T ss_pred EcCCCCEEEEEEEecCCC-CCCccEEEEEcCCCCCCCCchhhcchhhCCCEEEEecCCCCCCcccCCCCcccccccCCCC
Confidence 344555433333333331 12468999999999886554433333378999999999999944 21
Q ss_pred -----------------HHHHHHHHHHHHHHhhcC--CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCC
Q 012190 222 -----------------EGLVKFVEETVRREHASS--PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRS 282 (468)
Q Consensus 222 -----------------~~~~~dl~~~i~~~~~~~--~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~ 282 (468)
....+|+.++++.+.... ...+++++|||+||.+++.+|.++| +++++|+.+|....
T Consensus 153 ~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p-~v~~~vl~~p~~~~--- 228 (337)
T 1vlq_A 153 YPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKALLCDVPFLCH--- 228 (337)
T ss_dssp CSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCEEEEESCCSCC---
T ss_pred CCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHhcCC-CccEEEECCCcccC---
Confidence 267888888888876542 1358999999999999999999998 59999999885422
Q ss_pred CcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHH
Q 012190 283 QLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLK 362 (468)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 362 (468)
.......... .++. . ...+... ..........
T Consensus 229 ----~~~~~~~~~~---------------~~~~-------------~-~~~~~~~---------------~~~~~~~~~~ 260 (337)
T 1vlq_A 229 ----FRRAVQLVDT---------------HPYA-------------E-ITNFLKT---------------HRDKEEIVFR 260 (337)
T ss_dssp ----HHHHHHHCCC---------------TTHH-------------H-HHHHHHH---------------CTTCHHHHHH
T ss_pred ----HHHHHhcCCC---------------cchH-------------H-HHHHHHh---------------CchhHHHHHH
Confidence 1111100000 0000 0 0000000 0000000001
Q ss_pred HHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC-CcEEEEeCCCCccccc-cCcHHHHHHHH
Q 012190 363 LLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ-NCIVRNFKDNGHTLLL-EEGISLLTIIK 434 (468)
Q Consensus 363 ~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~-~~~~~~i~~aGH~~~~-e~p~~~~~~I~ 434 (468)
.+.... ....+.++++|+|+++|++|.++|++ ..+.+.+.++ ++++++++++||.... +..+++.+.|.
T Consensus 261 ~~~~~~--~~~~~~~i~~P~lii~G~~D~~~p~~-~~~~~~~~l~~~~~~~~~~~~gH~~~~~~~~~~~~~fl~ 331 (337)
T 1vlq_A 261 TLSYFD--GVNFAARAKIPALFSVGLMDNICPPS-TVFAAYNYYAGPKEIRIYPYNNHEGGGSFQAVEQVKFLK 331 (337)
T ss_dssp HHHTTC--HHHHHTTCCSCEEEEEETTCSSSCHH-HHHHHHHHCCSSEEEEEETTCCTTTTHHHHHHHHHHHHH
T ss_pred hhhhcc--HHHHHHHcCCCEEEEeeCCCCCCCch-hHHHHHHhcCCCcEEEEcCCCCCCCcchhhHHHHHHHHH
Confidence 111000 01234678899999999999999999 7999999987 5899999999999532 33334444443
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A | Back alignment and structure |
|---|
Probab=99.77 E-value=3.2e-19 Score=171.96 Aligned_cols=192 Identities=14% Similarity=0.150 Sum_probs=135.7
Q ss_pred CCCeEEEeCC---CCCchhhHHHhHhhh-cCCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhh---cCCCCcEEEEEeC
Q 012190 178 GSPTLLFLPG---IDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHA---SSPEKPIYLVGDS 250 (468)
Q Consensus 178 ~~p~lV~lHG---~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~---~~~~~~i~LvGhS 250 (468)
+.|+|||+|| ..++...|..++..| ..+|.|+++|+||+|.+++.+..+|+.++++.+.. ..+..+++|+|||
T Consensus 81 ~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~i~l~G~S 160 (303)
T 4e15_A 81 QAPLFVFVHGGYWQEMDMSMSCSIVGPLVRRGYRVAVMDYNLCPQVTLEQLMTQFTHFLNWIFDYTEMTKVSSLTFAGHX 160 (303)
T ss_dssp TCCEEEEECCSTTTSCCGGGSCTTHHHHHHTTCEEEEECCCCTTTSCHHHHHHHHHHHHHHHHHHHHHTTCSCEEEEEET
T ss_pred CCCEEEEECCCcCcCCChhHHHHHHHHHHhCCCEEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhhhcCCCeEEEEeec
Confidence 5799999999 446666777778878 67899999999999999988888888888877654 4456799999999
Q ss_pred hhHHHHHHHHHhCCC-------CceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhcc
Q 012190 251 FGGCLALAVAARNPT-------IDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIEN 323 (468)
Q Consensus 251 ~GG~ia~~~a~~~P~-------~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (468)
|||.+|+.++.+.+. .++++|+++|..... ......... .....+
T Consensus 161 ~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~~--------~~~~~~~~~--------~~~~~~------------ 212 (303)
T 4e15_A 161 AGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDLR--------ELSNLESVN--------PKNILG------------ 212 (303)
T ss_dssp HHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCCH--------HHHTCTTTS--------GGGTTC------------
T ss_pred HHHHHHHHHHhccccccCcccccccEEEEEeeeeccH--------hhhcccccc--------hhhhhc------------
Confidence 999999999987543 799999999865321 111000000 000000
Q ss_pred CCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcc----cCCceEEEEEeCCCCCCCcHHHH
Q 012190 324 RLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLH----AVKAEVLVLASGKDNMLPSEDEA 399 (468)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~----~i~~PvLlI~G~~D~~v~~~~~~ 399 (468)
.+. +. ... .. .+ ...+. .+++|+|+++|++|..++.. ..
T Consensus 213 -~~~----~~-~~~--------------~s--p~--------------~~~~~~~~~~~~~P~lii~G~~D~~v~~~-~~ 255 (303)
T 4e15_A 213 -LNE----RN-IES--------------VS--PM--------------LWEYTDVTVWNSTKIYVVAAEHDSTTFIE-QS 255 (303)
T ss_dssp -CCT----TT-TTT--------------TC--GG--------------GCCCCCGGGGTTSEEEEEEEEESCHHHHH-HH
T ss_pred -CCH----HH-HHH--------------cC--ch--------------hhcccccccCCCCCEEEEEeCCCCCCchH-HH
Confidence 000 00 000 00 00 01122 34899999999999999998 78
Q ss_pred HHHHHhCC----CcEEEEeCCCCccccccCcHHHHHHHH
Q 012190 400 KRLNNSLQ----NCIVRNFKDNGHTLLLEEGISLLTIIK 434 (468)
Q Consensus 400 ~~l~~~l~----~~~~~~i~~aGH~~~~e~p~~~~~~I~ 434 (468)
+.+.+.++ ++++++++++||+.++|........+.
T Consensus 256 ~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~l~ 294 (303)
T 4e15_A 256 RHYADVLRKKGYKASFTLFKGYDHFDIIEETAIDDSDVS 294 (303)
T ss_dssp HHHHHHHHHHTCCEEEEEEEEEETTHHHHGGGSTTSHHH
T ss_pred HHHHHHHHHCCCceEEEEeCCCCchHHHHHHhCCCcHHH
Confidence 88888775 679999999999999998877666655
|
| >4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=99.77 E-value=3.6e-18 Score=155.78 Aligned_cols=158 Identities=18% Similarity=0.199 Sum_probs=118.3
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC-------------ChHHHHHHHHHHHHHHhhc-CCCC
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT-------------PFEGLVKFVEETVRREHAS-SPEK 242 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S-------------s~~~~~~dl~~~i~~~~~~-~~~~ 242 (468)
.+++|||+||+|++...|..+.+.| ..++.|+++|.+|++.- .+++..+.+..+++.+... .+.+
T Consensus 21 a~~~Vv~lHG~G~~~~~~~~l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~~~ 100 (210)
T 4h0c_A 21 AKKAVVMLHGRGGTAADIISLQKVLKLDEMAIYAPQATNNSWYPYSFMAPVQQNQPALDSALALVGEVVAEIEAQGIPAE 100 (210)
T ss_dssp CSEEEEEECCTTCCHHHHHGGGGTSSCTTEEEEEECCGGGCSSSSCTTSCGGGGTTHHHHHHHHHHHHHHHHHHTTCCGG
T ss_pred CCcEEEEEeCCCCCHHHHHHHHHHhCCCCeEEEeecCCCCCccccccCCCcccchHHHHHHHHHHHHHHHHHHHhCCChh
Confidence 4679999999999999999999999 46899999999887521 1444555566666554432 3456
Q ss_pred cEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhc
Q 012190 243 PIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIE 322 (468)
Q Consensus 243 ~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (468)
+|+|+|+|+||.+|+.++.++|+++.++|.+++........
T Consensus 101 ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~~~~--------------------------------------- 141 (210)
T 4h0c_A 101 QIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQELA--------------------------------------- 141 (210)
T ss_dssp GEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSSSCC---------------------------------------
T ss_pred hEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCChhhh---------------------------------------
Confidence 89999999999999999999999999999988643110000
Q ss_pred cCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHH
Q 012190 323 NRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRL 402 (468)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l 402 (468)
... ..-...++|++++||++|+++|.+ ..+++
T Consensus 142 --------~~~---------------------------------------~~~~~~~~Pvl~~hG~~D~~vp~~-~~~~~ 173 (210)
T 4h0c_A 142 --------IGN---------------------------------------YKGDFKQTPVFISTGNPDPHVPVS-RVQES 173 (210)
T ss_dssp --------GGG---------------------------------------CCBCCTTCEEEEEEEESCTTSCHH-HHHHH
T ss_pred --------hhh---------------------------------------hhhhccCCceEEEecCCCCccCHH-HHHHH
Confidence 000 000223579999999999999999 67777
Q ss_pred HHhCC----CcEEEEeCCCCcccc
Q 012190 403 NNSLQ----NCIVRNFKDNGHTLL 422 (468)
Q Consensus 403 ~~~l~----~~~~~~i~~aGH~~~ 422 (468)
.+.+. +++++++|+.||.+.
T Consensus 174 ~~~L~~~g~~v~~~~ypg~gH~i~ 197 (210)
T 4h0c_A 174 VTILEDMNAAVSQVVYPGRPHTIS 197 (210)
T ss_dssp HHHHHHTTCEEEEEEEETCCSSCC
T ss_pred HHHHHHCCCCeEEEEECCCCCCcC
Confidence 66553 568899999999874
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.77 E-value=2.1e-18 Score=181.41 Aligned_cols=221 Identities=16% Similarity=0.208 Sum_probs=145.7
Q ss_pred ccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCc--hhhHHHhHhhh-cCCeEEEEecCCC---CCCC--------Ch
Q 012190 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGL--GLGLILHHKPL-GKAFEVRCLHIPV---YDRT--------PF 221 (468)
Q Consensus 156 ~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s--~~~~~~~~~~L-~~~~~V~~~D~~G---~G~S--------s~ 221 (468)
+...+|.......+.+.+. .++.|+||++||.+.+ ...|..+++.| .++|.|+++|+|| ||.+ ..
T Consensus 338 ~~~~~g~~i~~~~~~p~~~-~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~s~~~~~~~~~~ 416 (582)
T 3o4h_A 338 VESFDGSRVPTYVLESGRA-PTPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLKIIGDPC 416 (582)
T ss_dssp EECTTSCEEEEEEEEETTS-CSSEEEEEEECSSSSCCCCSSCCHHHHHHHHTTCEEEEECCTTCSSSCHHHHHTTTTCTT
T ss_pred EECCCCCEEEEEEEcCCCC-CCCCcEEEEECCCcccccccccCHHHHHHHhCCCEEEEeccCCCCCCchhHHhhhhhhcc
Confidence 3445665543333333332 1257899999998776 66778888888 6789999999999 6544 12
Q ss_pred HHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhh
Q 012190 222 EGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCA 301 (468)
Q Consensus 222 ~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (468)
....+|+.++++.+.......+++|+||||||.+|+.+|.++|++++++|+++|.... ..+.........
T Consensus 417 ~~~~~d~~~~~~~l~~~~~~d~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~--------~~~~~~~~~~~~-- 486 (582)
T 3o4h_A 417 GGELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDW--------EEMYELSDAAFR-- 486 (582)
T ss_dssp THHHHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTTSSCEEEESCCCCH--------HHHHHTCCHHHH--
T ss_pred cccHHHHHHHHHHHHhCCCcceEEEEEECHHHHHHHHHHhcCCCceEEEEEcCCccCH--------HHHhhcccchhH--
Confidence 3445666666666654432238999999999999999999999999999999984421 111111110000
Q ss_pred HHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCce
Q 012190 302 VPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAE 381 (468)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~P 381 (468)
.+.....+.. .+. +.... ....+.++++|
T Consensus 487 --~~~~~~~~~~-----------------~~~------------------------------~~~~s--p~~~~~~i~~P 515 (582)
T 3o4h_A 487 --NFIEQLTGGS-----------------REI------------------------------MRSRS--PINHVDRIKEP 515 (582)
T ss_dssp --HHHHHHTTTC-----------------HHH------------------------------HHHTC--GGGGGGGCCSC
T ss_pred --HHHHHHcCcC-----------------HHH------------------------------HHhcC--HHHHHhcCCCC
Confidence 0000000000 000 00000 01345678899
Q ss_pred EEEEEeCCCCCCCcHHHHHHHHHhCC----CcEEEEeCCCCcccc-ccCcHHHHHHHHhcCcccc
Q 012190 382 VLVLASGKDNMLPSEDEAKRLNNSLQ----NCIVRNFKDNGHTLL-LEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 382 vLlI~G~~D~~v~~~~~~~~l~~~l~----~~~~~~i~~aGH~~~-~e~p~~~~~~I~~~~F~~r 441 (468)
+|+++|++|..+|++ ..+.+.+.++ ++++++++++||.++ .+.+.++.+.+. +|+++
T Consensus 516 ~lii~G~~D~~v~~~-~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~i~--~fl~~ 577 (582)
T 3o4h_A 516 LALIHPQNASRTPLK-PLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAV--FFLAT 577 (582)
T ss_dssp EEEEEETTCSSSCHH-HHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHHHH--HHHHH
T ss_pred EEEEecCCCCCcCHH-HHHHHHHHHHhCCCCEEEEEECCCCCCCCChHHHHHHHHHHH--HHHHH
Confidence 999999999999999 7888888775 389999999999987 567778888887 45543
|
| >2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A | Back alignment and structure |
|---|
Probab=99.77 E-value=2.4e-18 Score=168.53 Aligned_cols=220 Identities=14% Similarity=0.089 Sum_probs=136.2
Q ss_pred CCCeEEEeCCCCC---chh--hHHHhHhhhc--CCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhcC--------CCC
Q 012190 178 GSPTLLFLPGIDG---LGL--GLILHHKPLG--KAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASS--------PEK 242 (468)
Q Consensus 178 ~~p~lV~lHG~~~---s~~--~~~~~~~~L~--~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~--------~~~ 242 (468)
+.|+||++||.+. +.. .|..++..|. .+|.|+++|+||++.+++....+|+.++++.+.... ...
T Consensus 82 ~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~d~~ 161 (338)
T 2o7r_A 82 KLPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAPEHRLPAAYDDAMEALQWIKDSRDEWLTNFADFS 161 (338)
T ss_dssp CEEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTCEEEEEECCCTTTTCTTHHHHHHHHHHHHHHTCCCHHHHHHEEEE
T ss_pred CceEEEEEcCCcCcCCCCCchhHHHHHHHHHHHCCcEEEEecCCCCCCCCCchHHHHHHHHHHHHHhCCcchhhccCCcc
Confidence 4789999999772 222 3888888885 689999999999999988888888888888876531 125
Q ss_pred cEEEEEeChhHHHHHHHHHhCCC--------CceEEEEeCCCCCCCCCCcCcchHHHhhCc-hhHHhhHHHHhhhhcCCh
Q 012190 243 PIYLVGDSFGGCLALAVAARNPT--------IDLILILSNPATSFGRSQLQPLFPILKAMP-DELHCAVPYLLSYVMGDP 313 (468)
Q Consensus 243 ~i~LvGhS~GG~ia~~~a~~~P~--------~v~~lVli~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 313 (468)
+++|+||||||.+|+.+|.++|+ +++++|+++|........ ........ .......
T Consensus 162 ~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~~~~~~~~----~~~~~~~~~~~~~~~~----------- 226 (338)
T 2o7r_A 162 NCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPGFGGSKRT----GSELRLANDSRLPTFV----------- 226 (338)
T ss_dssp EEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCCCCCSSCC----HHHHHTTTCSSSCHHH-----------
T ss_pred eEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCccCCCcCC----hhhhccCCCcccCHHH-----------
Confidence 89999999999999999999988 899999999876432211 00000000 0000000
Q ss_pred hhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCC
Q 012190 314 IKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNML 393 (468)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v 393 (468)
...+...+.. .......... ..+... ........+..+++|+|+++|++|.++
T Consensus 227 -----------------~~~~~~~~~~---~~~~~~~~~~-~~~~~~------~~~~~~~~l~~~~~P~Lvi~G~~D~~~ 279 (338)
T 2o7r_A 227 -----------------LDLIWELSLP---MGADRDHEYC-NPTAES------EPLYSFDKIRSLGWRVMVVGCHGDPMI 279 (338)
T ss_dssp -----------------HHHHHHHHSC---TTCCTTSTTT-CCC----------CCTHHHHHHHHTCEEEEEEETTSTTH
T ss_pred -----------------HHHHHHHhCC---CCCCCCCccc-CCCCCC------cccccHhhhcCCCCCEEEEECCCCcch
Confidence 0000000000 0000000000 000000 000000233456789999999999998
Q ss_pred CcHH-HHHHHHHhCCCcEEEEeCCCCccccccCc---HHHHHHHHhcCcccc
Q 012190 394 PSED-EAKRLNNSLQNCIVRNFKDNGHTLLLEEG---ISLLTIIKGTCKYRR 441 (468)
Q Consensus 394 ~~~~-~~~~l~~~l~~~~~~~i~~aGH~~~~e~p---~~~~~~I~~~~F~~r 441 (468)
+... ..+.+.+..+++++++++++||.+++++| +++.+.|. +|+.+
T Consensus 280 ~~~~~~~~~l~~~~~~~~~~~~~g~gH~~~~~~~~~~~~~~~~i~--~Fl~~ 329 (338)
T 2o7r_A 280 DRQMELAERLEKKGVDVVAQFDVGGYHAVKLEDPEKAKQFFVILK--KFVVD 329 (338)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEESSCCTTGGGTCHHHHHHHHHHHH--HHHC-
T ss_pred HHHHHHHHHHHHCCCcEEEEEECCCceEEeccChHHHHHHHHHHH--HHHHh
Confidence 7331 13444555557899999999999988777 67777777 56654
|
| >3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.1e-17 Score=162.98 Aligned_cols=213 Identities=13% Similarity=0.112 Sum_probs=133.2
Q ss_pred CCCeEEEeCCCC---CchhhHHHhHhhhc--CCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChh
Q 012190 178 GSPTLLFLPGID---GLGLGLILHHKPLG--KAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFG 252 (468)
Q Consensus 178 ~~p~lV~lHG~~---~s~~~~~~~~~~L~--~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~G 252 (468)
+.|+|||+||.+ ++...|..++..|. .+|.|+++|+||.+..++....+|+.+.++.+....+..+++|+|||||
T Consensus 95 ~~p~vv~lHGgg~~~~~~~~~~~~~~~la~~~g~~vi~~D~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~G 174 (326)
T 3d7r_A 95 IDKKILYIHGGFNALQPSPFHWRLLDKITLSTLYEVVLPIYPKTPEFHIDDTFQAIQRVYDQLVSEVGHQNVVVMGDGSG 174 (326)
T ss_dssp CSSEEEEECCSTTTSCCCHHHHHHHHHHHHHHCSEEEEECCCCTTTSCHHHHHHHHHHHHHHHHHHHCGGGEEEEEETHH
T ss_pred CCeEEEEECCCcccCCCCHHHHHHHHHHHHHhCCEEEEEeCCCCCCCCchHHHHHHHHHHHHHHhccCCCcEEEEEECHH
Confidence 478999999954 56778888888884 3799999999999888777666777766666654445568999999999
Q ss_pred HHHHHHHHHhCCCC----ceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChh
Q 012190 253 GCLALAVAARNPTI----DLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPR 328 (468)
Q Consensus 253 G~ia~~~a~~~P~~----v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (468)
|.+|+.+|.++|+. ++++|+++|...................+..........
T Consensus 175 G~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------- 231 (326)
T 3d7r_A 175 GALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDISDALIEQDAVLSQFGVNEI----------------------- 231 (326)
T ss_dssp HHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTTCCHHHHHHCSSCCHHHHHHH-----------------------
T ss_pred HHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCChhHHhhhcccCcccCHHHHHHH-----------------------
Confidence 99999999988776 999999999764432211100000000000000000000
Q ss_pred HHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcH-HHHHHHHHhCC
Q 012190 329 IKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSE-DEAKRLNNSLQ 407 (468)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~-~~~~~l~~~l~ 407 (468)
...+...... .. .....+ ...+..+ +|+|+++|++|..++.. ...+.+.+..+
T Consensus 232 --~~~~~~~~~~--------~~-~~~~~~--------------~~~~~~~-~P~lii~G~~D~~~~~~~~~~~~l~~~~~ 285 (326)
T 3d7r_A 232 --MKKWANGLPL--------TD-KRISPI--------------NGTIEGL-PPVYMFGGGREMTHPDMKLFEQMMLQHHQ 285 (326)
T ss_dssp --HHHHHTTSCT--------TS-TTTSGG--------------GSCCTTC-CCEEEEEETTSTTHHHHHHHHHHHHHTTC
T ss_pred --HHHhcCCCCC--------CC-CeECcc--------------cCCcccC-CCEEEEEeCcccchHHHHHHHHHHHHCCC
Confidence 0000000000 00 000000 0112222 59999999999754321 11234444456
Q ss_pred CcEEEEeCCCCccccc---cCcHHHHHHHHhcCcccc
Q 012190 408 NCIVRNFKDNGHTLLL---EEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 408 ~~~~~~i~~aGH~~~~---e~p~~~~~~I~~~~F~~r 441 (468)
++++++++++||..+. +.++++.+.|. +|+++
T Consensus 286 ~~~~~~~~g~~H~~~~~~~~~~~~~~~~i~--~fl~~ 320 (326)
T 3d7r_A 286 YIEFYDYPKMVHDFPIYPIRQSHKAIKQIA--KSIDE 320 (326)
T ss_dssp CEEEEEETTCCTTGGGSSSHHHHHHHHHHH--HHHTS
T ss_pred cEEEEEeCCCcccccccCCHHHHHHHHHHH--HHHHH
Confidence 7899999999999988 88888988888 56654
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=99.77 E-value=9.2e-18 Score=163.99 Aligned_cols=213 Identities=14% Similarity=0.150 Sum_probs=140.0
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC-----ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhH
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-----PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGG 253 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-----s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG 253 (468)
+|+|+|+||++++...|..+++.|..+|+|+++|+||+|.+ +++++++++.+.+... .+..+++|+||||||
T Consensus 101 ~~~l~~lhg~~~~~~~~~~l~~~L~~~~~v~~~d~~g~~~~~~~~~~~~~~a~~~~~~i~~~---~~~~~~~l~G~S~Gg 177 (329)
T 3tej_A 101 GPTLFCFHPASGFAWQFSVLSRYLDPQWSIIGIQSPRPNGPMQTAANLDEVCEAHLATLLEQ---QPHGPYYLLGYSLGG 177 (329)
T ss_dssp SCEEEEECCTTSCCGGGGGGGGTSCTTCEEEEECCCTTTSHHHHCSSHHHHHHHHHHHHHHH---CSSSCEEEEEETHHH
T ss_pred CCcEEEEeCCcccchHHHHHHHhcCCCCeEEEeeCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCCCCEEEEEEccCH
Confidence 78999999999999999999999998999999999999976 5888888877777663 345699999999999
Q ss_pred HHHHHHHHh---CCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHH
Q 012190 254 CLALAVAAR---NPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIK 330 (468)
Q Consensus 254 ~ia~~~a~~---~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (468)
.+|+.+|.+ +|+++.+++++++....... +... ....+...........
T Consensus 178 ~ia~~~a~~L~~~~~~v~~lvl~d~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~------------------------- 229 (329)
T 3tej_A 178 TLAQGIAARLRARGEQVAFLGLLDTWPPETQN-WQEK--EANGLDPEVLAEINRE------------------------- 229 (329)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEESCCCTHHHH-TC-------CCCCTHHHHHHHH-------------------------
T ss_pred HHHHHHHHHHHhcCCcccEEEEeCCCCCCccc-cccc--cccccChhhHHHHHHH-------------------------
Confidence 999999999 99999999999986532100 0000 0000000000000000
Q ss_pred hhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHH-HhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCc
Q 012190 331 LEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAY-ANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNC 409 (468)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~ 409 (468)
...+... .........+......+...... .......+++|++++.|++|...+.. ....+.+..++.
T Consensus 230 ~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~d~~~~~~-~~~~w~~~~~~~ 298 (329)
T 3tej_A 230 REAFLAA----------QQGSTSTELFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMS-PERAWSPWIAEL 298 (329)
T ss_dssp HHHHHHT----------TCCCSCCHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEEEEEGGGCCTTCC-HHHHHTTTEEEE
T ss_pred HHHHHHh----------ccccccHHHHHHHHHHHHHHHHHHhcCCCCCcCCCeEEEEeccCCCCCCC-chhhHHHhcCCc
Confidence 0000000 00000011111111111111000 11234677999999999999888776 466677777788
Q ss_pred EEEEeCCCCccccccCc--HHHHHHHH
Q 012190 410 IVRNFKDNGHTLLLEEG--ISLLTIIK 434 (468)
Q Consensus 410 ~~~~i~~aGH~~~~e~p--~~~~~~I~ 434 (468)
+++.++ +||+.+++.| +.+++.|.
T Consensus 299 ~~~~v~-g~H~~~~~~~~~~~ia~~l~ 324 (329)
T 3tej_A 299 DIYRQD-CAHVDIISPGTFEKIGPIIR 324 (329)
T ss_dssp EEEEES-SCGGGGGSTTTHHHHHHHHH
T ss_pred EEEEec-CChHHhCCChHHHHHHHHHH
Confidence 999998 7999888887 78888888
|
| >2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=5.8e-18 Score=166.77 Aligned_cols=216 Identities=17% Similarity=0.040 Sum_probs=136.1
Q ss_pred CCCeEEEeCCCCC---chh--hHHHhHhhhc--CCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhc------CCCC-c
Q 012190 178 GSPTLLFLPGIDG---LGL--GLILHHKPLG--KAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHAS------SPEK-P 243 (468)
Q Consensus 178 ~~p~lV~lHG~~~---s~~--~~~~~~~~L~--~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~------~~~~-~ 243 (468)
..|+||++||.+. +.. .|..++..|+ .+|.|+++|+||++.+.+....+|+.++++.+... .... +
T Consensus 112 ~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~d~~~~ 191 (351)
T 2zsh_A 112 IVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNSRSWLKSKKDSKVH 191 (351)
T ss_dssp SCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTSEEEEECCCCTTTSCTTHHHHHHHHHHHHHHTCGGGCCTTTSSCE
T ss_pred CceEEEEECCCcCcCCCCcchhHHHHHHHHHHHcCCEEEEecCCCCCCCCCchhHHHHHHHHHHHHhCchhhcCCCCCCc
Confidence 4689999999553 333 3888888885 58999999999999998877788888888776643 2345 8
Q ss_pred EEEEEeChhHHHHHHHHHhCCC---CceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHh
Q 012190 244 IYLVGDSFGGCLALAVAARNPT---IDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVN 320 (468)
Q Consensus 244 i~LvGhS~GG~ia~~~a~~~P~---~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (468)
++|+||||||.+|+.+|.++|+ +++++|+++|........ ........ .+
T Consensus 192 i~l~G~S~GG~la~~~a~~~~~~~~~v~~~vl~~p~~~~~~~~----~~~~~~~~----------------~~------- 244 (351)
T 2zsh_A 192 IFLAGDSSGGNIAHNVALRAGESGIDVLGNILLNPMFGGNERT----ESEKSLDG----------------KY------- 244 (351)
T ss_dssp EEEEEETHHHHHHHHHHHHHHTTTCCCCEEEEESCCCCCSSCC----HHHHHHTT----------------TS-------
T ss_pred EEEEEeCcCHHHHHHHHHHhhccCCCeeEEEEECCccCCCcCC----hhhhhcCC----------------Cc-------
Confidence 9999999999999999999988 899999999876432110 00000000 00
Q ss_pred hccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCc-eEEEEEeCCCCCCCcHH-H
Q 012190 321 IENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKA-EVLVLASGKDNMLPSED-E 398 (468)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~-PvLlI~G~~D~~v~~~~-~ 398 (468)
..... ....+...+.. ....... .....+. .....+..+++ |+|+++|++|.+++... .
T Consensus 245 ---~~~~~-~~~~~~~~~~~---~~~~~~~-~~~~~~~-----------~~~~~l~~i~~pP~Lii~G~~D~~~~~~~~~ 305 (351)
T 2zsh_A 245 ---FVTVR-DRDWYWKAFLP---EGEDREH-PACNPFS-----------PRGKSLEGVSFPKSLVVVAGLDLIRDWQLAY 305 (351)
T ss_dssp ---SCCHH-HHHHHHHHHSC---TTCCTTS-TTTCTTS-----------TTSCCCTTCCCCEEEEEEETTSTTHHHHHHH
T ss_pred ---ccCHH-HHHHHHHHhCC---CCCCCCC-cccCCCC-----------CCccchhhCCCCCEEEEEcCCCcchHHHHHH
Confidence 00000 00000000000 0000000 0000000 00134566677 99999999999876220 1
Q ss_pred HHHHHHhCCCcEEEEeCCCCccccc----cCcHHHHHHHHhcCcccc
Q 012190 399 AKRLNNSLQNCIVRNFKDNGHTLLL----EEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 399 ~~~l~~~l~~~~~~~i~~aGH~~~~----e~p~~~~~~I~~~~F~~r 441 (468)
.+.+.+...++++++++++||.++. +.++++.+.|. +|+++
T Consensus 306 ~~~l~~~g~~~~~~~~~g~gH~~~~~~~~~~~~~~~~~i~--~Fl~~ 350 (351)
T 2zsh_A 306 AEGLKKAGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEIS--AFVNA 350 (351)
T ss_dssp HHHHHHTTCCEEEEEETTCCTTTTSSSCSHHHHHHHHHHH--HHHHC
T ss_pred HHHHHHcCCCEEEEEECCCcEEEEecCCCHHHHHHHHHHH--HHhcC
Confidence 2333333348899999999999887 88899999888 56543
|
| >3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A | Back alignment and structure |
|---|
Probab=99.77 E-value=1.4e-17 Score=162.19 Aligned_cols=102 Identities=20% Similarity=0.139 Sum_probs=84.8
Q ss_pred CCCeEEEeCC---CCCchhhHHHhHhhhcC--CeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhcC----CCCcEEEEE
Q 012190 178 GSPTLLFLPG---IDGLGLGLILHHKPLGK--AFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASS----PEKPIYLVG 248 (468)
Q Consensus 178 ~~p~lV~lHG---~~~s~~~~~~~~~~L~~--~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~----~~~~i~LvG 248 (468)
+.|+||++|| ..++...|..++..|.+ +|.|+++|+||+|++.+....+|+.+.++.+.... ..++++|+|
T Consensus 89 ~~p~vv~~HGGg~~~g~~~~~~~~~~~La~~~g~~Vv~~Dyrg~~~~~~p~~~~d~~~~~~~l~~~~~~lgd~~~i~l~G 168 (323)
T 3ain_A 89 PYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYRLAPENKFPAAVVDSFDALKWVYNNSEKFNGKYGIAVGG 168 (323)
T ss_dssp CCCEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHTGGGGTCTTCEEEEE
T ss_pred CCcEEEEECCCccccCChHHHHHHHHHHHHhcCCEEEEecCCCCCCCCCcchHHHHHHHHHHHHHhHHHhCCCceEEEEe
Confidence 4789999999 55888899999999964 89999999999999987777777776666654322 456899999
Q ss_pred eChhHHHHHHHHHhCCCCc---eEEEEeCCCCCC
Q 012190 249 DSFGGCLALAVAARNPTID---LILILSNPATSF 279 (468)
Q Consensus 249 hS~GG~ia~~~a~~~P~~v---~~lVli~p~~~~ 279 (468)
|||||.+|+.+|.++|+.+ .++|+++|....
T Consensus 169 ~S~GG~lA~~~a~~~~~~~~~~~~~vl~~p~~~~ 202 (323)
T 3ain_A 169 DSAGGNLAAVTAILSKKENIKLKYQVLIYPAVSF 202 (323)
T ss_dssp ETHHHHHHHHHHHHHHHTTCCCSEEEEESCCCSC
T ss_pred cCchHHHHHHHHHHhhhcCCCceeEEEEeccccC
Confidence 9999999999999988776 899999987643
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A | Back alignment and structure |
|---|
Probab=99.76 E-value=8.3e-18 Score=169.50 Aligned_cols=208 Identities=13% Similarity=0.095 Sum_probs=130.1
Q ss_pred CCCeEEEeCCCCCchh-hHHHhHhhh-cCCeEEEEecCCCCCCCC-------hHHHHHHHHHHHHHHhhcCCCCcEEEEE
Q 012190 178 GSPTLLFLPGIDGLGL-GLILHHKPL-GKAFEVRCLHIPVYDRTP-------FEGLVKFVEETVRREHASSPEKPIYLVG 248 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~-~~~~~~~~L-~~~~~V~~~D~~G~G~Ss-------~~~~~~dl~~~i~~~~~~~~~~~i~LvG 248 (468)
+.|+||++||++++.. .|..+...| ..+|.|+++|+||+|.|+ .+++.+++.+++..... ....+++++|
T Consensus 192 ~~P~vv~~hG~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~~~~~~~~~~~~v~~~l~~~~~-vd~~~i~l~G 270 (415)
T 3mve_A 192 PHPVVIVSAGLDSLQTDMWRLFRDHLAKHDIAMLTVDMPSVGYSSKYPLTEDYSRLHQAVLNELFSIPY-VDHHRVGLIG 270 (415)
T ss_dssp CEEEEEEECCTTSCGGGGHHHHHHTTGGGTCEEEEECCTTSGGGTTSCCCSCTTHHHHHHHHHGGGCTT-EEEEEEEEEE
T ss_pred CCCEEEEECCCCccHHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHhCcC-CCCCcEEEEE
Confidence 4789999999999954 555666777 678999999999999884 45555555555554220 1245899999
Q ss_pred eChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChh
Q 012190 249 DSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPR 328 (468)
Q Consensus 249 hS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (468)
|||||.+|+.+|..+|++++++|+++|....... ........+......+. ...+.. ...
T Consensus 271 ~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~~~~~----~~~~~~~~~~~~~~~~~----~~~g~~----------~~~-- 330 (415)
T 3mve_A 271 FRFGGNAMVRLSFLEQEKIKACVILGAPIHDIFA----SPQKLQQMPKMYLDVLA----SRLGKS----------VVD-- 330 (415)
T ss_dssp ETHHHHHHHHHHHHTTTTCCEEEEESCCCSHHHH----CHHHHTTSCHHHHHHHH----HHTTCS----------SBC--
T ss_pred ECHHHHHHHHHHHhCCcceeEEEEECCccccccc----cHHHHHHhHHHHHHHHH----HHhCCC----------ccC--
Confidence 9999999999999999999999999986421000 00111111111110000 000000 000
Q ss_pred HHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhh--cccCCceEEEEEeCCCCCCCcHHHHHHHHHhC
Q 012190 329 IKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSR--LHAVKAEVLVLASGKDNMLPSEDEAKRLNNSL 406 (468)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l 406 (468)
...+... +.......... ..++++|+|+|+|++|.++|++ ..+.+.+..
T Consensus 331 --~~~~~~~--------------------------~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~-~~~~l~~~~ 381 (415)
T 3mve_A 331 --IYSLSGQ--------------------------MAAWSLKVQGFLSSRKTKVPILAMSLEGDPVSPYS-DNQMVAFFS 381 (415)
T ss_dssp --HHHHHHH--------------------------GGGGCTTTTTTTTSSCBSSCEEEEEETTCSSSCHH-HHHHHHHTB
T ss_pred --HHHHHHH--------------------------HhhcCcccccccccCCCCCCEEEEEeCCCCCCCHH-HHHHHHHhC
Confidence 0000000 00000000001 2578999999999999999999 799999989
Q ss_pred CCcEEEEeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 407 QNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 407 ~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
++++++++++..+. +.++++.+.+. .|++
T Consensus 382 ~~~~l~~i~g~~~h---~~~~~~~~~i~--~fL~ 410 (415)
T 3mve_A 382 TYGKAKKISSKTIT---QGYEQSLDLAI--KWLE 410 (415)
T ss_dssp TTCEEEEECCCSHH---HHHHHHHHHHH--HHHH
T ss_pred CCceEEEecCCCcc---cchHHHHHHHH--HHHH
Confidence 99999999983222 25566666666 3444
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=5.8e-18 Score=181.95 Aligned_cols=216 Identities=13% Similarity=0.091 Sum_probs=143.5
Q ss_pred cCCCC-CCceeeeecCCC-CCCCCCCeEEEeCCCCCch---hhHHH----hHhhh-cCCeEEEEecCCCCCCCCh-----
Q 012190 157 IKPDG-GPPRWFCPVDCG-RPLKGSPTLLFLPGIDGLG---LGLIL----HHKPL-GKAFEVRCLHIPVYDRTPF----- 221 (468)
Q Consensus 157 ~~~dg-~~~~~~~y~~~g-~~~~~~p~lV~lHG~~~s~---~~~~~----~~~~L-~~~~~V~~~D~~G~G~Ss~----- 221 (468)
...+| .......+.+.+ .+.++.|+||++||.+++. ..|.. +++.| ..+|.|+++|+||+|.+..
T Consensus 461 ~~~~g~~~~~~~~~~P~~~~~~~~~p~iv~~HGg~~~~~~~~~~~~~~~~~~~~la~~G~~v~~~d~rG~g~s~~~~~~~ 540 (706)
T 2z3z_A 461 MAADGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMAQKGYAVFTVDSRGSANRGAAFEQV 540 (706)
T ss_dssp ECTTSSSEEEEEEECCTTCCTTSCEEEEEECCCCTTCCCCCSCC----CCHHHHHHHTTCEEEEECCTTCSSSCHHHHHT
T ss_pred EcCCCCEEEEEEEEeCCCCCCCCCccEEEEecCCCCceeeccccccCchHHHHHHHhCCcEEEEEecCCCcccchhHHHH
Confidence 44566 443333333333 1112358999999987765 34544 56777 5789999999999998842
Q ss_pred ------HHHHHHHHHHHHHHhhcC--CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhh
Q 012190 222 ------EGLVKFVEETVRREHASS--PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKA 293 (468)
Q Consensus 222 ------~~~~~dl~~~i~~~~~~~--~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~ 293 (468)
....+|+.++++.+.... ...+++|+||||||.+|+.+|.++|++++++|+++|...... .
T Consensus 541 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~-----~------ 609 (706)
T 2z3z_A 541 IHRRLGQTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGGPVIDWNR-----Y------ 609 (706)
T ss_dssp TTTCTTHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCCCCGGG-----S------
T ss_pred HhhccCCccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHHHHHhCCCcEEEEEEcCCccchHH-----H------
Confidence 233477777777765331 235899999999999999999999999999999998653210 0
Q ss_pred CchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhh
Q 012190 294 MPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANS 373 (468)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 373 (468)
... + ...+.+.+. .. .+. +... ....
T Consensus 610 -~~~----~---~~~~~~~~~----------~~----~~~------------------------------~~~~--~~~~ 635 (706)
T 2z3z_A 610 -AIM----Y---GERYFDAPQ----------EN----PEG------------------------------YDAA--NLLK 635 (706)
T ss_dssp -BHH----H---HHHHHCCTT----------TC----HHH------------------------------HHHH--CGGG
T ss_pred -Hhh----h---hhhhcCCcc----------cC----hhh------------------------------hhhC--CHhH
Confidence 000 0 000000000 00 000 0000 0123
Q ss_pred hcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC----CcEEEEeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 374 RLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ----NCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 374 ~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~----~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
.+.++++|+|+++|++|..+|++ ..+.+.+.++ ++++++++++||.++.+.++++.+.|. .|+.
T Consensus 636 ~~~~i~~P~lii~G~~D~~v~~~-~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~--~fl~ 703 (706)
T 2z3z_A 636 RAGDLKGRLMLIHGAIDPVVVWQ-HSLLFLDACVKARTYPDYYVYPSHEHNVMGPDRVHLYETIT--RYFT 703 (706)
T ss_dssp GGGGCCSEEEEEEETTCSSSCTH-HHHHHHHHHHHHTCCCEEEEETTCCSSCCTTHHHHHHHHHH--HHHH
T ss_pred hHHhCCCCEEEEeeCCCCCCCHH-HHHHHHHHHHHCCCCeEEEEeCCCCCCCCcccHHHHHHHHH--HHHH
Confidence 45778899999999999999999 7888887775 459999999999999888888988888 4554
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.75 E-value=4.3e-18 Score=160.06 Aligned_cols=203 Identities=12% Similarity=0.046 Sum_probs=136.2
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhcCCeEE--------------EEecCCCCC--------------CCChHHHHHHHH
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEV--------------RCLHIPVYD--------------RTPFEGLVKFVE 229 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V--------------~~~D~~G~G--------------~Ss~~~~~~dl~ 229 (468)
.+++|||+||++++...|..+++.|.+.+.+ +++|-++.+ ..+++++++++.
T Consensus 2 ~~~pvvllHG~~~~~~~~~~l~~~L~~~~~~~~~~~~~~v~~~G~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~ 81 (254)
T 3ds8_A 2 DQIPIILIHGSGGNASSLDKMADQLMNEYRSSNEALTMTVNSEGKIKFEGKLTKDAKRPIIKFGFEQNQATPDDWSKWLK 81 (254)
T ss_dssp CCCCEEEECCTTCCTTTTHHHHHHHHHTTCCCCCEEEEEEETTTEEEEESCCCTTCSSCEEEEEESSTTSCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCcchHHHHHHHHHHhcCCCceEEEEEEcCCCeEEEEEEeccCCCCCEEEEEecCCCCCHHHHHHHHH
Confidence 3667999999999999999999999654433 344422111 126788999998
Q ss_pred HHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCC-----CceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHH
Q 012190 230 ETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPT-----IDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPY 304 (468)
Q Consensus 230 ~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~-----~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (468)
.+++.+....+.++++++||||||.+++.+|.++|+ +++++|+++++...... ....
T Consensus 82 ~~i~~l~~~~~~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~--------~~~~---------- 143 (254)
T 3ds8_A 82 IAMEDLKSRYGFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDP--------NDNG---------- 143 (254)
T ss_dssp HHHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCH--------HHHC----------
T ss_pred HHHHHHHHHhCCCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCcccc--------cccc----------
Confidence 888887766667799999999999999999999998 89999999986533110 0000
Q ss_pred HhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEE
Q 012190 305 LLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLV 384 (468)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLl 384 (468)
.. ... ...+.. ...+..+. .....+.. ++|++.
T Consensus 144 -------~~-----------~~~----------------------~~~p~~--~~~~~~~~----~~~~~~~~-~~~vl~ 176 (254)
T 3ds8_A 144 -------MD-----------LSF----------------------KKLPNS--TPQMDYFI----KNQTEVSP-DLEVLA 176 (254)
T ss_dssp -------SC-----------TTC----------------------SSCSSC--CHHHHHHH----HTGGGSCT-TCEEEE
T ss_pred -------cc-----------ccc----------------------ccCCcc--hHHHHHHH----HHHhhCCC-CcEEEE
Confidence 00 000 000000 00000000 00123333 799999
Q ss_pred EEeC------CCCCCCcHHHHHHHHHhCCC----cEEEEeCC--CCccccccCcHHHHHHHHhcCcccccCCCCCCC
Q 012190 385 LASG------KDNMLPSEDEAKRLNNSLQN----CIVRNFKD--NGHTLLLEEGISLLTIIKGTCKYRRSRKLDSVA 449 (468)
Q Consensus 385 I~G~------~D~~v~~~~~~~~l~~~l~~----~~~~~i~~--aGH~~~~e~p~~~~~~I~~~~F~~r~~~~~~v~ 449 (468)
|+|+ .|.++|.. .++.+...+++ .+...+.+ ++|..+.++|+ +.+.|. .|+++..+...+.
T Consensus 177 I~G~~~~~~~~Dg~Vp~~-ss~~l~~~~~~~~~~~~~~~~~g~~a~Hs~l~~~~~-v~~~i~--~fL~~~~~~~~~~ 249 (254)
T 3ds8_A 177 IAGELSEDNPTDGIVPTI-SSLATRLFMPGSAKAYIEDIQVGEDAVHQTLHETPK-SIEKTY--WFLEKFKTDETVI 249 (254)
T ss_dssp EEEESBTTBCBCSSSBHH-HHTGGGGTSBTTBSEEEEEEEESGGGCGGGGGGSHH-HHHHHH--HHHHTCCCSSCEE
T ss_pred EEecCCCCCCCCcEeeHH-HHHHHHHHhhccCcceEEEEEeCCCCchhcccCCHH-HHHHHH--HHHHHhcCCCcee
Confidence 9999 99999999 68888777764 34455655 77999999885 777777 6777765554443
|
| >2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.75 E-value=1e-16 Score=152.31 Aligned_cols=239 Identities=13% Similarity=0.096 Sum_probs=140.1
Q ss_pred ccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCC---CchhhH-HHhHhhh-cCCeEEEEecCCCCCCCChHHHHHHHHH
Q 012190 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGID---GLGLGL-ILHHKPL-GKAFEVRCLHIPVYDRTPFEGLVKFVEE 230 (468)
Q Consensus 156 ~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~---~s~~~~-~~~~~~L-~~~~~V~~~D~~G~G~Ss~~~~~~dl~~ 230 (468)
+...+|.+.+++.+.. .+.|+||++||.+ ++...| ..+...+ ..+|.|+++|+|+.++.++...++|+.+
T Consensus 9 ~~~~~~~~~~~y~p~~-----~~~p~iv~~HGGg~~~g~~~~~~~~~~~~l~~~g~~Vi~vdYrlaPe~~~p~~~~D~~~ 83 (274)
T 2qru_A 9 QTLANGATVTIYPTTT-----EPTNYVVYLHGGGMIYGTKSDLPEELKELFTSNGYTVLALDYLLAPNTKIDHILRTLTE 83 (274)
T ss_dssp EECTTSCEEEEECCSS-----SSCEEEEEECCSTTTSCCGGGCCHHHHHHHHTTTEEEEEECCCCTTTSCHHHHHHHHHH
T ss_pred ccccCCeeEEEEcCCC-----CCCcEEEEEeCccccCCChhhchHHHHHHHHHCCCEEEEeCCCCCCCCCCcHHHHHHHH
Confidence 3444555555543321 2478999999988 666555 4556666 4579999999999999999999999999
Q ss_pred HHHHHhhcCC-CCcEEEEEeChhHHHHHHHHH---hCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHh
Q 012190 231 TVRREHASSP-EKPIYLVGDSFGGCLALAVAA---RNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLL 306 (468)
Q Consensus 231 ~i~~~~~~~~-~~~i~LvGhS~GG~ia~~~a~---~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (468)
+++.+..... .++++|+|+|+||.+|+.+|. ..|..+++++++.|............ ...+..... ..
T Consensus 84 al~~l~~~~~~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~----~~~~~~~~~----~~ 155 (274)
T 2qru_A 84 TFQLLNEEIIQNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTDLEFIKEPRK----LLKQAISAK----EI 155 (274)
T ss_dssp HHHHHHHHTTTTCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSCSGGGGSCCC----SCSSCCCSG----GG
T ss_pred HHHHHHhccccCCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEEEEcccccccccCCchh----hccccccHH----HH
Confidence 9988775433 568999999999999999997 46788999999887554110000000 000000000 00
Q ss_pred hhhcC-ChhhHHHHhhccCCChhHHhhhhh-hhcchhcchhhhhhcc-CCcchhHHHHHHHHHHhHHHhhhcccCCceEE
Q 012190 307 SYVMG-DPIKMAMVNIENRLPPRIKLEQLS-NNLPALLPRLSVMSDI-IPKDTLLWKLKLLKSASAYANSRLHAVKAEVL 383 (468)
Q Consensus 307 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvL 383 (468)
..+.. .+.. ....... +..... .....+.......... .....+. ...+..+ .|+|
T Consensus 156 ~~~~~~~~~~------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~l~~l-pP~l 214 (274)
T 2qru_A 156 AAIDQTKPVW------DDPFLSR-YLLYHYSIQQALLPHFYGLPENGDWSAYALS-------------DETLKTF-PPCF 214 (274)
T ss_dssp TTSCCSSCCS------CCTTCTT-HHHHHHHHHTTCHHHHHTCCTTSCCGGGCCC-------------HHHHHTS-CCEE
T ss_pred hhhcccCCCC------CCccccc-hhhhhhhhhhcchhhccCcccccccccCCCC-------------hhhhcCC-CCEE
Confidence 00000 0000 0000000 000000 0000000000000000 0000000 0123555 7999
Q ss_pred EEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHH
Q 012190 384 VLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISL 429 (468)
Q Consensus 384 lI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~ 429 (468)
+++|+.|..++.. .++++.+.+++++++++++++|.++.+.+...
T Consensus 215 i~~G~~D~~~~~~-~~~~l~~~~~~~~l~~~~g~~H~~~~~~~~~~ 259 (274)
T 2qru_A 215 STASSSDEEVPFR-YSKKIGRTIPESTFKAVYYLEHDFLKQTKDPS 259 (274)
T ss_dssp EEEETTCSSSCTH-HHHHHHHHSTTCEEEEECSCCSCGGGGTTSHH
T ss_pred EEEecCCCCcCHH-HHHHHHHhCCCcEEEEcCCCCcCCccCcCCHH
Confidence 9999999999988 78999999999999999999999987755543
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.75 E-value=4.8e-18 Score=171.76 Aligned_cols=99 Identities=21% Similarity=0.178 Sum_probs=73.4
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCCCh---HHHHHHHHHHHHHHhhcC--CCCcEEEEEeCh
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTPF---EGLVKFVEETVRREHASS--PEKPIYLVGDSF 251 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss~---~~~~~dl~~~i~~~~~~~--~~~~i~LvGhS~ 251 (468)
..|+||++||++++...+ .+..| ..+|.|+++|+||+|.+.- ....+++.++++.+.... ...+++|+||||
T Consensus 157 ~~P~Vv~~hG~~~~~~~~--~a~~La~~Gy~V~a~D~rG~g~~~~~~~~~~~~d~~~~~~~l~~~~~v~~~~i~l~G~S~ 234 (422)
T 3k2i_A 157 PFPGIIDIFGIGGGLLEY--RASLLAGHGFATLALAYYNFEDLPNNMDNISLEYFEEAVCYMLQHPQVKGPGIGLLGISL 234 (422)
T ss_dssp CBCEEEEECCTTCSCCCH--HHHHHHTTTCEEEEEECSSSTTSCSSCSCEETHHHHHHHHHHHTSTTBCCSSEEEEEETH
T ss_pred CcCEEEEEcCCCcchhHH--HHHHHHhCCCEEEEEccCCCCCCCCCcccCCHHHHHHHHHHHHhCcCcCCCCEEEEEECH
Confidence 378999999998874433 46667 6789999999999987731 111333344444433322 346999999999
Q ss_pred hHHHHHHHHHhCCCCceEEEEeCCCCCC
Q 012190 252 GGCLALAVAARNPTIDLILILSNPATSF 279 (468)
Q Consensus 252 GG~ia~~~a~~~P~~v~~lVli~p~~~~ 279 (468)
||.+|+.+|.++|+ ++++|++++....
T Consensus 235 GG~lAl~~a~~~p~-v~a~V~~~~~~~~ 261 (422)
T 3k2i_A 235 GADICLSMASFLKN-VSATVSINGSGIS 261 (422)
T ss_dssp HHHHHHHHHHHCSS-EEEEEEESCCSBC
T ss_pred HHHHHHHHHhhCcC-ccEEEEEcCcccc
Confidence 99999999999998 9999999987643
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.75 E-value=7.8e-18 Score=181.89 Aligned_cols=218 Identities=17% Similarity=0.153 Sum_probs=146.6
Q ss_pred ccCCCC-CCceeeeecCCCC-CCCCCCeEEEeCCCCCch---hhHH-----HhHhhh-cCCeEEEEecCCCCCCCChH--
Q 012190 156 IIKPDG-GPPRWFCPVDCGR-PLKGSPTLLFLPGIDGLG---LGLI-----LHHKPL-GKAFEVRCLHIPVYDRTPFE-- 222 (468)
Q Consensus 156 ~~~~dg-~~~~~~~y~~~g~-~~~~~p~lV~lHG~~~s~---~~~~-----~~~~~L-~~~~~V~~~D~~G~G~Ss~~-- 222 (468)
+...+| .......+.+.+. +.+..|+||++||.+++. ..|. .+++.| ..+|.|+++|+||+|.+.-.
T Consensus 492 ~~~~~g~~~l~~~~~~P~~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~s~~~~~ 571 (741)
T 2ecf_A 492 LTAADGKTPLNYSVIKPAGFDPAKRYPVAVYVYGGPASQTVTDSWPGRGDHLFNQYLAQQGYVVFSLDNRGTPRRGRDFG 571 (741)
T ss_dssp EECTTSSCEEEEEEECCSSCCTTSCEEEEEECCCSTTCCSCSSCCCCSHHHHHHHHHHHTTCEEEEECCTTCSSSCHHHH
T ss_pred EEcCCCCEEEEEEEEeCCCCCCCCCcCEEEEEcCCCCcccccccccccchhHHHHHHHhCCCEEEEEecCCCCCCChhhh
Confidence 345566 5543333333331 122468899999998774 2344 567777 67899999999999997422
Q ss_pred ---------HHHHHHHHHHHHHhhcC--CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHH
Q 012190 223 ---------GLVKFVEETVRREHASS--PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPIL 291 (468)
Q Consensus 223 ---------~~~~dl~~~i~~~~~~~--~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~ 291 (468)
...+|+.++++.+.... ...+++|+||||||.+++.+|.++|++++++|+++|...... .
T Consensus 572 ~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~-----~---- 642 (741)
T 2ecf_A 572 GALYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGAPVTDWGL-----Y---- 642 (741)
T ss_dssp HTTTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCGGG-----S----
T ss_pred HHHhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCCCceEEEEEcCCCcchhh-----h----
Confidence 23677777777765432 245899999999999999999999999999999998653210 0
Q ss_pred hhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHH
Q 012190 292 KAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYA 371 (468)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 371 (468)
... + ...+.+.+.. ... .+... ..
T Consensus 643 ---~~~----~---~~~~~~~~~~---------------~~~-----------------------------~~~~~--~~ 666 (741)
T 2ecf_A 643 ---DSH----Y---TERYMDLPAR---------------NDA-----------------------------GYREA--RV 666 (741)
T ss_dssp ---BHH----H---HHHHHCCTGG---------------GHH-----------------------------HHHHH--CS
T ss_pred ---ccc----c---chhhcCCccc---------------Chh-----------------------------hhhhc--CH
Confidence 000 0 0000000000 000 00000 00
Q ss_pred hhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC----CcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 372 NSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ----NCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 372 ~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~----~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
...+.++++|+|+++|++|..++++ ..+.+.+.++ +.++++++++||.++.+.++++.+.|. +|+++
T Consensus 667 ~~~~~~i~~P~lii~G~~D~~v~~~-~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~--~fl~~ 737 (741)
T 2ecf_A 667 LTHIEGLRSPLLLIHGMADDNVLFT-NSTSLMSALQKRGQPFELMTYPGAKHGLSGADALHRYRVAE--AFLGR 737 (741)
T ss_dssp GGGGGGCCSCEEEEEETTCSSSCTH-HHHHHHHHHHHTTCCCEEEEETTCCSSCCHHHHHHHHHHHH--HHHHH
T ss_pred HHHHhhCCCCEEEEccCCCCCCCHH-HHHHHHHHHHHCCCceEEEEECCCCCCCCCCchhHHHHHHH--HHHHH
Confidence 1345778899999999999999999 7888888775 359999999999999888888888888 45543
|
| >3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.74 E-value=4.8e-17 Score=151.89 Aligned_cols=196 Identities=16% Similarity=0.113 Sum_probs=132.9
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhcC-C--eEEEEecCCCCCCC-------------------------ChHHHHHHHH
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLGK-A--FEVRCLHIPVYDRT-------------------------PFEGLVKFVE 229 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~-~--~~V~~~D~~G~G~S-------------------------s~~~~~~dl~ 229 (468)
+.+++||+||++++...|..+++.|.+ + ++|+.+|.+++|.+ ++.++++++.
T Consensus 5 ~~~pvvliHG~~~~~~~~~~l~~~L~~~g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~~l~ 84 (249)
T 3fle_A 5 KTTATLFLHGYGGSERSETFMVKQALNKNVTNEVITARVSSEGKVYFDKKLSEDAANPIVKVEFKDNKNGNFKENAYWIK 84 (249)
T ss_dssp CCEEEEEECCTTCCGGGTHHHHHHHHTTTSCSCEEEEEECSSCCEEESSCCC--CCSCEEEEEESSTTCCCHHHHHHHHH
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHHcCCCceEEEEEECCCCCEEEccccccccCCCeEEEEcCCCCCccHHHHHHHHH
Confidence 466899999999999999999999944 4 47999998888753 2345788888
Q ss_pred HHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCC-----CceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHH
Q 012190 230 ETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPT-----IDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPY 304 (468)
Q Consensus 230 ~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~-----~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (468)
++++.+....+.++++|+||||||.+++.+|.++|+ +|+++|+++++.......... +.. . .
T Consensus 85 ~~i~~l~~~~~~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~--------~~~-~----~ 151 (249)
T 3fle_A 85 EVLSQLKSQFGIQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMNEN--------VNE-I----I 151 (249)
T ss_dssp HHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTSSC--------TTT-S----C
T ss_pred HHHHHHHHHhCCCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCcccccCC--------cch-h----h
Confidence 888888777777899999999999999999999874 799999998765332110000 000 0 0
Q ss_pred HhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEE
Q 012190 305 LLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLV 384 (468)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLl 384 (468)
+. ..+.| ... ... +..+.. ....+...++|+|.
T Consensus 152 -~~-~~g~p---------~~~-----~~~---------------------------~~~l~~----~~~~~p~~~~~vl~ 184 (249)
T 3fle_A 152 -VD-KQGKP---------SRM-----NAA---------------------------YRQLLS----LYKIYCGKEIEVLN 184 (249)
T ss_dssp -BC-TTCCB---------SSC-----CHH---------------------------HHHTGG----GHHHHTTTTCEEEE
T ss_pred -hc-ccCCC---------ccc-----CHH---------------------------HHHHHH----HHhhCCccCCeEEE
Confidence 00 00000 000 000 000000 01234556899999
Q ss_pred EEeC------CCCCCCcHHHHHHHHHhCCC----cEEEEeCC--CCccccccCcHHHHHHHHh
Q 012190 385 LASG------KDNMLPSEDEAKRLNNSLQN----CIVRNFKD--NGHTLLLEEGISLLTIIKG 435 (468)
Q Consensus 385 I~G~------~D~~v~~~~~~~~l~~~l~~----~~~~~i~~--aGH~~~~e~p~~~~~~I~~ 435 (468)
|+|+ .|..||.. .++.+...+++ .+.+++.| +.|..+.++| ++.+.|.+
T Consensus 185 I~G~~~~~~~sDG~V~~~-Sa~~~~~l~~~~~~~y~e~~v~g~~a~Hs~l~~n~-~V~~~I~~ 245 (249)
T 3fle_A 185 IYGDLEDGSHSDGRVSNS-SSQSLQYLLRGSTKSYQEMKFKGAKAQHSQLHENK-DVANEIIQ 245 (249)
T ss_dssp EEEECCSSSCBSSSSBHH-HHHTHHHHSTTCSSEEEEEEEESGGGSTGGGGGCH-HHHHHHHH
T ss_pred EeccCCCCCCCCCcccHH-HHHHHHHHHhhCCCceEEEEEeCCCCchhccccCH-HHHHHHHH
Confidence 9998 79999999 68777666653 25566655 8999999977 66666663
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=2e-17 Score=160.49 Aligned_cols=100 Identities=15% Similarity=0.064 Sum_probs=86.7
Q ss_pred CCCeEEEeCCCCCchhh-HH-HhHhhh-cCCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHH
Q 012190 178 GSPTLLFLPGIDGLGLG-LI-LHHKPL-GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGC 254 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~-~~-~~~~~L-~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ 254 (468)
++++|||+||++++... |. .+.+.| ..+|+|+++|+||||.++.++.++++.++++.+....+.++++|+||||||.
T Consensus 30 ~~~~VvllHG~~~~~~~~~~~~l~~~L~~~G~~v~~~d~~g~g~~~~~~~~~~l~~~i~~~~~~~g~~~v~lVGhS~GG~ 109 (317)
T 1tca_A 30 VSKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLNDTQVNTEYMVNAITALYAGSGNNKLPVLTWSQGGL 109 (317)
T ss_dssp CSSEEEEECCTTCCHHHHHTTTHHHHHHTTTCEEEEECCTTTTCSCHHHHHHHHHHHHHHHHHHTTSCCEEEEEETHHHH
T ss_pred CCCeEEEECCCCCCcchhhHHHHHHHHHhCCCEEEEECCCCCCCCcHHHHHHHHHHHHHHHHHHhCCCCEEEEEEChhhH
Confidence 36689999999999987 98 888999 4589999999999999988777778887777776656667999999999999
Q ss_pred HHHHHHHhCC---CCceEEEEeCCCC
Q 012190 255 LALAVAARNP---TIDLILILSNPAT 277 (468)
Q Consensus 255 ia~~~a~~~P---~~v~~lVli~p~~ 277 (468)
++..++..+| ++|+++|+++++.
T Consensus 110 va~~~~~~~~~~~~~v~~lV~l~~~~ 135 (317)
T 1tca_A 110 VAQWGLTFFPSIRSKVDRLMAFAPDY 135 (317)
T ss_dssp HHHHHHHHCGGGTTTEEEEEEESCCT
T ss_pred HHHHHHHHcCccchhhhEEEEECCCC
Confidence 9999988876 8999999999854
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.74 E-value=9.7e-18 Score=170.74 Aligned_cols=99 Identities=23% Similarity=0.215 Sum_probs=74.1
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCCChH---HHHHHHHHHHHHHhhcC--CCCcEEEEEeCh
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTPFE---GLVKFVEETVRREHASS--PEKPIYLVGDSF 251 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss~~---~~~~dl~~~i~~~~~~~--~~~~i~LvGhS~ 251 (468)
..|+||++||++++...+ .+..| ..+|.|+++|+||+|.+... .-.+++.+.++.+.... ...+++|+||||
T Consensus 173 ~~P~Vv~lhG~~~~~~~~--~a~~La~~Gy~Vla~D~rG~~~~~~~~~~~~~~d~~~a~~~l~~~~~vd~~~i~l~G~S~ 250 (446)
T 3hlk_A 173 PFPGIVDMFGTGGGLLEY--RASLLAGKGFAVMALAYYNYEDLPKTMETLHLEYFEEAMNYLLSHPEVKGPGVGLLGISK 250 (446)
T ss_dssp CBCEEEEECCSSCSCCCH--HHHHHHTTTCEEEEECCSSSTTSCSCCSEEEHHHHHHHHHHHHTSTTBCCSSEEEEEETH
T ss_pred CCCEEEEECCCCcchhhH--HHHHHHhCCCEEEEeccCCCCCCCcchhhCCHHHHHHHHHHHHhCCCCCCCCEEEEEECH
Confidence 368999999998864443 36677 57899999999999987311 11344444444444332 236899999999
Q ss_pred hHHHHHHHHHhCCCCceEEEEeCCCCCC
Q 012190 252 GGCLALAVAARNPTIDLILILSNPATSF 279 (468)
Q Consensus 252 GG~ia~~~a~~~P~~v~~lVli~p~~~~ 279 (468)
||.+|+.+|.++|+ ++++|++++....
T Consensus 251 GG~lAl~~A~~~p~-v~a~V~~~~~~~~ 277 (446)
T 3hlk_A 251 GGELCLSMASFLKG-ITAAVVINGSVAN 277 (446)
T ss_dssp HHHHHHHHHHHCSC-EEEEEEESCCSBC
T ss_pred HHHHHHHHHHhCCC-ceEEEEEcCcccc
Confidence 99999999999998 9999999987643
|
| >2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A | Back alignment and structure |
|---|
Probab=99.74 E-value=5.9e-18 Score=163.56 Aligned_cols=102 Identities=20% Similarity=0.164 Sum_probs=86.8
Q ss_pred CCCeEEEeCC---CCCchhhHHHhHhhhcC--CeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhcC-----CCCcEEEE
Q 012190 178 GSPTLLFLPG---IDGLGLGLILHHKPLGK--AFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASS-----PEKPIYLV 247 (468)
Q Consensus 178 ~~p~lV~lHG---~~~s~~~~~~~~~~L~~--~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~-----~~~~i~Lv 247 (468)
+.|+||++|| ++++...|..++..|.. +|.|+++|+||+|.+++....+|+.++++.+.... ..++++|+
T Consensus 73 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~ 152 (310)
T 2hm7_A 73 PYPALVYYHGGSWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEHKFPAAVEDAYDALQWIAERAADFHLDPARIAVG 152 (310)
T ss_dssp SEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHTTGGGTEEEEEEEEE
T ss_pred CCCEEEEECCCccccCChhHhHHHHHHHHHhcCCEEEEeCCCCCCCCCCCccHHHHHHHHHHHHhhHHHhCCCcceEEEE
Confidence 4689999999 78888899999999943 79999999999999998888888888887765432 23589999
Q ss_pred EeChhHHHHHHHHHhCCC----CceEEEEeCCCCCC
Q 012190 248 GDSFGGCLALAVAARNPT----IDLILILSNPATSF 279 (468)
Q Consensus 248 GhS~GG~ia~~~a~~~P~----~v~~lVli~p~~~~ 279 (468)
||||||.+|+.+|.++|+ .++++|+++|....
T Consensus 153 G~S~GG~la~~~a~~~~~~~~~~v~~~vl~~p~~~~ 188 (310)
T 2hm7_A 153 GDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGY 188 (310)
T ss_dssp EETHHHHHHHHHHHHHHHTTCCCCCCEEEESCCCCC
T ss_pred EECHHHHHHHHHHHHHHhcCCCCceEEEEEcCCcCC
Confidence 999999999999998876 69999999997654
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 | Back alignment and structure |
|---|
Probab=99.73 E-value=4.4e-17 Score=150.27 Aligned_cols=206 Identities=18% Similarity=0.154 Sum_probs=130.2
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHH
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALA 258 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~ 258 (468)
+++|+|+||++++...|..+.+.|.. ++|+++|+||+|. .++++.+.++.+. ...+++|+||||||.+|+.
T Consensus 17 ~~~l~~~hg~~~~~~~~~~~~~~l~~-~~v~~~d~~g~~~-----~~~~~~~~i~~~~---~~~~~~l~G~S~Gg~ia~~ 87 (230)
T 1jmk_C 17 EQIIFAFPPVLGYGLMYQNLSSRLPS-YKLCAFDFIEEED-----RLDRYADLIQKLQ---PEGPLTLFGYSAGCSLAFE 87 (230)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHCTT-EEEEEECCCCSTT-----HHHHHHHHHHHHC---CSSCEEEEEETHHHHHHHH
T ss_pred CCCEEEECCCCCchHHHHHHHHhcCC-CeEEEecCCCHHH-----HHHHHHHHHHHhC---CCCCeEEEEECHhHHHHHH
Confidence 67899999999999999999999987 9999999999874 4566666676643 2458999999999999999
Q ss_pred HHHhCC---CCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhh
Q 012190 259 VAARNP---TIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLS 335 (468)
Q Consensus 259 ~a~~~P---~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (468)
+|.+++ +.+.++|++++........+... .....+..++.. ++ .. .......+.
T Consensus 88 ~a~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~---------~~~~~~~~~~~~---~~----------~~-~~~~~~~~~ 144 (230)
T 1jmk_C 88 AAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGR---------TVESDVEALMNV---NR----------DN-EALNSEAVK 144 (230)
T ss_dssp HHHHHHHTTCCEEEEEEESCCEECCCC-----------------CCHHHHHHH---TT----------TC-SGGGSHHHH
T ss_pred HHHHHHHcCCCccEEEEECCCCCCcccccccc---------cHHHHHHHHHhc---Ch----------hh-hhhhhHHHH
Confidence 998764 67999999997643221110000 000000000000 00 00 000000000
Q ss_pred hhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC-CcEEEEe
Q 012190 336 NNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ-NCIVRNF 414 (468)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~-~~~~~~i 414 (468)
..+......+..... .......+++|+++++|++|..++.. ...+.+..+ +++++.+
T Consensus 145 -------------------~~~~~~~~~~~~~~~-~~~~~~~~~~P~l~i~g~~D~~~~~~--~~~w~~~~~~~~~~~~i 202 (230)
T 1jmk_C 145 -------------------HGLKQKTHAFYSYYV-NLISTGQVKADIDLLTSGADFDIPEW--LASWEEATTGAYRMKRG 202 (230)
T ss_dssp -------------------HHHHHHHHHHHHHHH-HCCCCSCBSSEEEEEECSSCCCCCTT--EECSGGGBSSCEEEEEC
T ss_pred -------------------HHHHHHHHHHHHHhh-hccccccccccEEEEEeCCCCCCccc--cchHHHhcCCCeEEEEe
Confidence 000000001100000 01245788999999999999988743 444455544 6899999
Q ss_pred CCCCc--cccccCcHHHHHHHHhcCcccc
Q 012190 415 KDNGH--TLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 415 ~~aGH--~~~~e~p~~~~~~I~~~~F~~r 441 (468)
++ || ++..++++.+++.|. .|+.+
T Consensus 203 ~g-~H~~~~~~~~~~~~~~~i~--~~l~~ 228 (230)
T 1jmk_C 203 FG-THAEMLQGETLDRNAGILL--EFLNT 228 (230)
T ss_dssp SS-CGGGTTSHHHHHHHHHHHH--HHHTC
T ss_pred cC-ChHHHcCcHhHHHHHHHHH--HHHhh
Confidence 96 99 888889999999998 55544
|
| >1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A | Back alignment and structure |
|---|
Probab=99.73 E-value=3.9e-17 Score=158.85 Aligned_cols=102 Identities=22% Similarity=0.177 Sum_probs=83.2
Q ss_pred CCCeEEEeCCCC---CchhhHHHhHhhhc--CCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhc-----CCCCcEEEE
Q 012190 178 GSPTLLFLPGID---GLGLGLILHHKPLG--KAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHAS-----SPEKPIYLV 247 (468)
Q Consensus 178 ~~p~lV~lHG~~---~s~~~~~~~~~~L~--~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~-----~~~~~i~Lv 247 (468)
+.|+||++||.+ ++...|..++..|. .+|.|+++|+||+|++++....+|+.++++.+... ...++++|+
T Consensus 78 ~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~G~~Vv~~d~rg~~~~~~~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~ 157 (323)
T 1lzl_A 78 PVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAPETTFPGPVNDCYAALLYIHAHAEELGIDPSRIAVG 157 (323)
T ss_dssp CEEEEEEECCSTTTSCCGGGGHHHHHHHHHHHCCEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEE
T ss_pred CCcEEEEECCCccccCChhhhHHHHHHHHHhcCcEEEEecCCCCCCCCCCchHHHHHHHHHHHHhhHHHcCCChhheEEE
Confidence 468999999998 88888888888884 38999999999999998777677776666655431 123589999
Q ss_pred EeChhHHHHHHHHHhCCC----CceEEEEeCCCCCC
Q 012190 248 GDSFGGCLALAVAARNPT----IDLILILSNPATSF 279 (468)
Q Consensus 248 GhS~GG~ia~~~a~~~P~----~v~~lVli~p~~~~ 279 (468)
||||||.+|+.+|.++|+ .++++|+++|....
T Consensus 158 G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~ 193 (323)
T 1lzl_A 158 GQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDD 193 (323)
T ss_dssp EETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCCT
T ss_pred ecCchHHHHHHHHHHHhhcCCCCeeEEEEECCccCC
Confidence 999999999999988765 49999999987643
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A | Back alignment and structure |
|---|
Probab=99.73 E-value=2.2e-16 Score=150.69 Aligned_cols=95 Identities=18% Similarity=0.288 Sum_probs=82.3
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCC-CChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHH
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDR-TPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLA 256 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~-Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia 256 (468)
++++|||+||++++...|..+.+.|. ++|+++|+++... .+++++++++.+.++.+. +..+++|+||||||.+|
T Consensus 23 ~~~~l~~~hg~~~~~~~~~~~~~~L~--~~v~~~d~~~~~~~~~~~~~a~~~~~~i~~~~---~~~~~~l~GhS~Gg~va 97 (283)
T 3tjm_A 23 SERPLFLVHPIEGSTTVFHSLASRLS--IPTYGLQCTRAAPLDSIHSLAAYYIDCIRQVQ---PEGPYRVAGYSYGACVA 97 (283)
T ss_dssp SSCCEEEECCTTCCSGGGHHHHHHCS--SCEEEECCCTTSCCSCHHHHHHHHHHHHTTTC---CSSCCEEEEETHHHHHH
T ss_pred CCCeEEEECCCCCCHHHHHHHHHhcC--ceEEEEecCCCCCCCCHHHHHHHHHHHHHHhC---CCCCEEEEEECHhHHHH
Confidence 46789999999999999999999998 9999999987543 378999999988887632 34689999999999999
Q ss_pred HHHHHhC---CCCce---EEEEeCCCC
Q 012190 257 LAVAARN---PTIDL---ILILSNPAT 277 (468)
Q Consensus 257 ~~~a~~~---P~~v~---~lVli~p~~ 277 (468)
+.+|.+. |+.+. ++|++++..
T Consensus 98 ~~~a~~~~~~~~~v~~~~~lvlid~~~ 124 (283)
T 3tjm_A 98 FEMCSQLQAQQSPAPTHNSLFLFDGSP 124 (283)
T ss_dssp HHHHHHHHHHHTTSCCCCEEEEESCCT
T ss_pred HHHHHHHHHcCCCCCccceEEEEcCCc
Confidence 9999876 88899 999999854
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.6e-16 Score=148.29 Aligned_cols=196 Identities=17% Similarity=0.130 Sum_probs=130.4
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHH
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALA 258 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~ 258 (468)
+++|||+||++++...|..+++.|..+++|+++|+||++ ++++++.+.++.+. +..+++|+||||||.+|+.
T Consensus 22 ~~~l~~~hg~~~~~~~~~~~~~~l~~~~~v~~~d~~g~~-----~~~~~~~~~i~~~~---~~~~~~l~GhS~Gg~va~~ 93 (244)
T 2cb9_A 22 GKNLFCFPPISGFGIYFKDLALQLNHKAAVYGFHFIEED-----SRIEQYVSRITEIQ---PEGPYVLLGYSAGGNLAFE 93 (244)
T ss_dssp SSEEEEECCTTCCGGGGHHHHHHTTTTSEEEEECCCCST-----THHHHHHHHHHHHC---SSSCEEEEEETHHHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHHHHhCCCceEEEEcCCCHH-----HHHHHHHHHHHHhC---CCCCEEEEEECHhHHHHHH
Confidence 678999999999999999999999889999999999985 46677777777642 2458999999999999999
Q ss_pred HHHhC---CCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhh
Q 012190 259 VAARN---PTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLS 335 (468)
Q Consensus 259 ~a~~~---P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (468)
+|.+. ++.+.++|++++..... .+... .. ...+ ..+ ..+ .....+.
T Consensus 94 ~a~~~~~~~~~v~~lvl~~~~~~~~--~~~~~-------~~--~~~~----~~~---------------~~~-~~~~~~~ 142 (244)
T 2cb9_A 94 VVQAMEQKGLEVSDFIIVDAYKKDQ--SITAD-------TE--NDDS----AAY---------------LPE-AVRETVM 142 (244)
T ss_dssp HHHHHHHTTCCEEEEEEESCCCCCS--CCCCC--------------------CC---------------SCH-HHHHHHT
T ss_pred HHHHHHHcCCCccEEEEEcCCCCcc--ccccc-------cc--HHHH----HHH---------------hHH-HHHHHHH
Confidence 99875 57899999999865311 11000 00 0000 000 000 0000000
Q ss_pred hhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeC--CCCCCCcHHHHHHHHHhCC-CcEEE
Q 012190 336 NNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASG--KDNMLPSEDEAKRLNNSLQ-NCIVR 412 (468)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~--~D~~v~~~~~~~~l~~~l~-~~~~~ 412 (468)
. ....+..... .......+++|+++++|+ +|.. ++. ....+.+..+ +++++
T Consensus 143 ~-----------------------~~~~~~~~~~-~~~~~~~i~~Pvl~i~g~~~~D~~-~~~-~~~~w~~~~~~~~~~~ 196 (244)
T 2cb9_A 143 Q-----------------------KKRCYQEYWA-QLINEGRIKSNIHFIEAGIQTETS-GAM-VLQKWQDAAEEGYAEY 196 (244)
T ss_dssp H-----------------------HHHHHHHHHH-HCCCCSCBSSEEEEEECSBCSCCC-HHH-HTTSSGGGBSSCEEEE
T ss_pred H-----------------------HHHHHHHHHH-hhccCCCcCCCEEEEEccCccccc-ccc-chhHHHHhcCCCCEEE
Confidence 0 0000000000 012457889999999999 8873 444 3444555554 68999
Q ss_pred EeCCCCc--cccccCcHHHHHHHHhcCccccc
Q 012190 413 NFKDNGH--TLLLEEGISLLTIIKGTCKYRRS 442 (468)
Q Consensus 413 ~i~~aGH--~~~~e~p~~~~~~I~~~~F~~r~ 442 (468)
.+++ || ++..+.++.+++.|. .|+.+.
T Consensus 197 ~i~g-gH~~~~~~~~~~~~~~~i~--~~L~~~ 225 (244)
T 2cb9_A 197 TGYG-AHKDMLEGEFAEKNANIIL--NILDKI 225 (244)
T ss_dssp ECSS-BGGGTTSHHHHHHHHHHHH--HHHHTC
T ss_pred EecC-ChHHHcChHHHHHHHHHHH--HHHhcC
Confidence 9996 99 777789999999999 566543
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.71 E-value=6.3e-17 Score=150.42 Aligned_cols=181 Identities=17% Similarity=0.153 Sum_probs=119.5
Q ss_pred CCCeEEEeCCCCCchhhHHH----hHhhhcC-CeEEEEecCC---------------------CCCCC------------
Q 012190 178 GSPTLLFLPGIDGLGLGLIL----HHKPLGK-AFEVRCLHIP---------------------VYDRT------------ 219 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~----~~~~L~~-~~~V~~~D~~---------------------G~G~S------------ 219 (468)
..|+|||+||++++...|.. +.+.|.+ +|+|+++|+| |+|.+
T Consensus 4 ~~~~vl~lHG~g~~~~~~~~~~~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~w~~~~~~~~~ 83 (243)
T 1ycd_A 4 QIPKLLFLHGFLQNGKVFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRAWFYHSEISHE 83 (243)
T ss_dssp CCCEEEEECCTTCCHHHHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEESSCCCSSGGG
T ss_pred cCceEEEeCCCCccHHHHHHHHHHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCCCCcccccCCCCcch
Confidence 46799999999999998874 5566644 8999999999 55654
Q ss_pred -ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCC------CCceEEEEeCCCCCCCCCCcCcchHHHh
Q 012190 220 -PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNP------TIDLILILSNPATSFGRSQLQPLFPILK 292 (468)
Q Consensus 220 -s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P------~~v~~lVli~p~~~~~~~~~~~~~~~~~ 292 (468)
++++.++.+.+.++. . ..+++|+||||||.+|+.+|.+++ ..++.++++++....... .
T Consensus 84 ~d~~~~~~~l~~~~~~---~--~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~--~------- 149 (243)
T 1ycd_A 84 LDISEGLKSVVDHIKA---N--GPYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPD--P------- 149 (243)
T ss_dssp CCCHHHHHHHHHHHHH---H--CCCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEEC--T-------
T ss_pred hhHHHHHHHHHHHHHh---c--CCeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCCCcc--c-------
Confidence 345555555555543 1 247899999999999999998753 246677776654321000 0
Q ss_pred hCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHh
Q 012190 293 AMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYAN 372 (468)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 372 (468)
... . ...+... +. + ..
T Consensus 150 ~~~--------~--------------------------~~~~~~~--------------~~-~---------------~~ 165 (243)
T 1ycd_A 150 EHP--------G--------------------------ELRITEK--------------FR-D---------------SF 165 (243)
T ss_dssp TST--------T--------------------------CEEECGG--------------GT-T---------------TT
T ss_pred ccc--------c--------------------------ccccchh--------------HH-H---------------hc
Confidence 000 0 0000000 00 0 00
Q ss_pred hhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCC-------cEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 373 SRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQN-------CIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 373 ~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~-------~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
..+..+++|+|+++|++|.++|++ ..+.+.+.+++ ...++++++||++..+ ..+.+.|. +|+++
T Consensus 166 ~~~~~~~~P~l~i~G~~D~~vp~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~gH~~~~~--~~~~~~i~--~fl~~ 236 (243)
T 1ycd_A 166 AVKPDMKTKMIFIYGASDQAVPSV-RSKYLYDIYLKAQNGNKEKVLAYEHPGGHMVPNK--KDIIRPIV--EQITS 236 (243)
T ss_dssp CCCTTCCCEEEEEEETTCSSSCHH-HHHHHHHHHHHHTTTCTTTEEEEEESSSSSCCCC--HHHHHHHH--HHHHH
T ss_pred cCcccCCCCEEEEEeCCCCccCHH-HHHHHHHHhhhhccccccccEEEecCCCCcCCch--HHHHHHHH--HHHHH
Confidence 123568999999999999999999 68888887764 3666778899998765 35777777 45544
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.71 E-value=1.5e-16 Score=169.69 Aligned_cols=203 Identities=16% Similarity=0.162 Sum_probs=133.2
Q ss_pred CCCeEEEeCCCCCchh--hHHHhHhhh-cCCeEEEEecCCC---CCCCC-------h-HHHHHHHHHHHHHHhhc--CCC
Q 012190 178 GSPTLLFLPGIDGLGL--GLILHHKPL-GKAFEVRCLHIPV---YDRTP-------F-EGLVKFVEETVRREHAS--SPE 241 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~--~~~~~~~~L-~~~~~V~~~D~~G---~G~Ss-------~-~~~~~dl~~~i~~~~~~--~~~ 241 (468)
..|+||++||.+++.. .|...++.| .++|.|+++|+|| ||.+. + ....+|+.+.++.+... ...
T Consensus 423 ~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~ 502 (662)
T 3azo_A 423 LPPYVVMAHGGPTSRVPAVLDLDVAYFTSRGIGVADVNYGGSTGYGRAYRERLRGRWGVVDVEDCAAVATALAEEGTADR 502 (662)
T ss_dssp CCCEEEEECSSSSSCCCCSCCHHHHHHHTTTCEEEEEECTTCSSSCHHHHHTTTTTTTTHHHHHHHHHHHHHHHTTSSCT
T ss_pred CccEEEEECCCCCccCcccchHHHHHHHhCCCEEEEECCCCCCCccHHHHHhhccccccccHHHHHHHHHHHHHcCCcCh
Confidence 4789999999987765 677778888 5689999999999 77551 1 12245555555554443 345
Q ss_pred CcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHh-hCchhHHhhHHHHhhhhcCChhhHHHHh
Q 012190 242 KPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILK-AMPDELHCAVPYLLSYVMGDPIKMAMVN 320 (468)
Q Consensus 242 ~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (468)
++++|+||||||.+++.++.. |++++++|+++|..... .... ....... .+...+.+..
T Consensus 503 ~~i~l~G~S~GG~~a~~~~~~-~~~~~~~v~~~~~~~~~--------~~~~~~~~~~~~----~~~~~~~~~~------- 562 (662)
T 3azo_A 503 ARLAVRGGSAGGWTAASSLVS-TDVYACGTVLYPVLDLL--------GWADGGTHDFES----RYLDFLIGSF------- 562 (662)
T ss_dssp TCEEEEEETHHHHHHHHHHHH-CCCCSEEEEESCCCCHH--------HHHTTCSCGGGT----THHHHHTCCT-------
T ss_pred hhEEEEEECHHHHHHHHHHhC-cCceEEEEecCCccCHH--------HHhcccccchhh----HhHHHHhCCC-------
Confidence 699999999999999998886 99999999998854210 0110 0000000 0000000000
Q ss_pred hccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHH
Q 012190 321 IENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAK 400 (468)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~ 400 (468)
+ +.. ..+.... ....+.++++|+|+++|++|..+|+. ..+
T Consensus 563 --------------------------------~-~~~----~~~~~~s--p~~~~~~~~~P~lii~G~~D~~vp~~-~~~ 602 (662)
T 3azo_A 563 --------------------------------E-EFP----ERYRDRA--PLTRADRVRVPFLLLQGLEDPVCPPE-QCD 602 (662)
T ss_dssp --------------------------------T-TCH----HHHHHTC--GGGGGGGCCSCEEEEEETTCSSSCTH-HHH
T ss_pred --------------------------------c-cch----hHHHhhC--hHhHhccCCCCEEEEeeCCCCCCCHH-HHH
Confidence 0 000 0000000 11345778899999999999999999 799
Q ss_pred HHHHhCCCc----EEEEeCCCCcccc-ccCcHHHHHHHHhcCccccc
Q 012190 401 RLNNSLQNC----IVRNFKDNGHTLL-LEEGISLLTIIKGTCKYRRS 442 (468)
Q Consensus 401 ~l~~~l~~~----~~~~i~~aGH~~~-~e~p~~~~~~I~~~~F~~r~ 442 (468)
.+.+.+++. ++++++++||.+. .+.+.++.+.+. .|+.+.
T Consensus 603 ~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~--~fl~~~ 647 (662)
T 3azo_A 603 RFLEAVAGCGVPHAYLSFEGEGHGFRRKETMVRALEAEL--SLYAQV 647 (662)
T ss_dssp HHHHHHTTSCCCEEEEEETTCCSSCCSHHHHHHHHHHHH--HHHHHH
T ss_pred HHHHHHHHcCCCEEEEEECCCCCCCCChHHHHHHHHHHH--HHHHHH
Confidence 999888754 9999999999874 356677777777 455543
|
| >1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.71 E-value=3.6e-17 Score=158.37 Aligned_cols=102 Identities=21% Similarity=0.165 Sum_probs=82.1
Q ss_pred CCCeEEEeCCCC---CchhhHHHhHhhhc--CCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhc-----CCCCcEEEE
Q 012190 178 GSPTLLFLPGID---GLGLGLILHHKPLG--KAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHAS-----SPEKPIYLV 247 (468)
Q Consensus 178 ~~p~lV~lHG~~---~s~~~~~~~~~~L~--~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~-----~~~~~i~Lv 247 (468)
+.|+||++||.+ ++...|..++..|. .+|.|+++|+||+|++++....+|+.++++.+... ....+++|+
T Consensus 78 ~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~Vv~~dyrg~g~~~~p~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~ 157 (311)
T 1jji_A 78 DSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPEHKFPAAVYDCYDATKWVAENAEELRIDPSKIFVG 157 (311)
T ss_dssp SEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTSEEEEEECCCTTTSCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEE
T ss_pred CceEEEEECCcccccCChhHhHHHHHHHHHHhCCEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhHHHhCCCchhEEEE
Confidence 468999999999 88888999999885 58999999999999997665555555555444321 123489999
Q ss_pred EeChhHHHHHHHHHhCCCC----ceEEEEeCCCCCC
Q 012190 248 GDSFGGCLALAVAARNPTI----DLILILSNPATSF 279 (468)
Q Consensus 248 GhS~GG~ia~~~a~~~P~~----v~~lVli~p~~~~ 279 (468)
|||+||.+|+.+|.++|+. ++++|+++|....
T Consensus 158 G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~ 193 (311)
T 1jji_A 158 GDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNF 193 (311)
T ss_dssp EETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCS
T ss_pred EeCHHHHHHHHHHHHHHhcCCCCceEEEEeCCccCC
Confidence 9999999999999988765 9999999997654
|
| >3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.71 E-value=8.8e-17 Score=156.58 Aligned_cols=119 Identities=17% Similarity=0.060 Sum_probs=92.8
Q ss_pred ccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCC---CchhhHHHhHhhhcC--CeEEEEecCCCCCCCChHHHHHHHHH
Q 012190 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGID---GLGLGLILHHKPLGK--AFEVRCLHIPVYDRTPFEGLVKFVEE 230 (468)
Q Consensus 156 ~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~---~s~~~~~~~~~~L~~--~~~V~~~D~~G~G~Ss~~~~~~dl~~ 230 (468)
+...+|.. ....|.+.+. +.|+||++||.+ ++...|..++..|.. +|.|+++|+|+.+...+....+|+.+
T Consensus 68 ~~~~~g~i-~~~~~~p~~~---~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~V~~~dyr~~p~~~~~~~~~D~~~ 143 (326)
T 3ga7_A 68 VPTPYGDV-TTRLYSPQPT---SQATLYYLHGGGFILGNLDTHDRIMRLLARYTGCTVIGIDYSLSPQARYPQAIEETVA 143 (326)
T ss_dssp ECCTTSCE-EEEEEESSSS---CSCEEEEECCSTTTSCCTTTTHHHHHHHHHHHCSEEEEECCCCTTTSCTTHHHHHHHH
T ss_pred eecCCCCe-EEEEEeCCCC---CCcEEEEECCCCcccCChhhhHHHHHHHHHHcCCEEEEeeCCCCCCCCCCcHHHHHHH
Confidence 34456633 3333334333 358999999998 888899999999955 99999999999999888888888888
Q ss_pred HHHHHhhcC-----CCCcEEEEEeChhHHHHHHHHHhCCCC------ceEEEEeCCCCC
Q 012190 231 TVRREHASS-----PEKPIYLVGDSFGGCLALAVAARNPTI------DLILILSNPATS 278 (468)
Q Consensus 231 ~i~~~~~~~-----~~~~i~LvGhS~GG~ia~~~a~~~P~~------v~~lVli~p~~~ 278 (468)
.++.+.... ...+|+|+|||+||.+|+.+|.++|+. +.++|+++|...
T Consensus 144 a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~~~~~ 202 (326)
T 3ga7_A 144 VCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGLYG 202 (326)
T ss_dssp HHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEEEEEESCCCS
T ss_pred HHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceEEEEeccccc
Confidence 887776432 346899999999999999999987764 899999988654
|
| >3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A | Back alignment and structure |
|---|
Probab=99.70 E-value=1.7e-16 Score=154.32 Aligned_cols=101 Identities=20% Similarity=0.254 Sum_probs=85.6
Q ss_pred CCe-EEEeCCCC---CchhhHHHhHhhhcC--CeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhc-CCCCcEEEEEeCh
Q 012190 179 SPT-LLFLPGID---GLGLGLILHHKPLGK--AFEVRCLHIPVYDRTPFEGLVKFVEETVRREHAS-SPEKPIYLVGDSF 251 (468)
Q Consensus 179 ~p~-lV~lHG~~---~s~~~~~~~~~~L~~--~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~-~~~~~i~LvGhS~ 251 (468)
.|+ ||++||.+ ++...|..++..|.. +|.|+++|+|+++.+.+....+|+.+.++.+... ....+++|+|||+
T Consensus 79 ~~~~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~~~~~d~~~a~~~l~~~~~~~~~i~l~G~S~ 158 (322)
T 3k6k_A 79 GAAHILYFHGGGYISGSPSTHLVLTTQLAKQSSATLWSLDYRLAPENPFPAAVDDCVAAYRALLKTAGSADRIIIAGDSA 158 (322)
T ss_dssp CSCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTCEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHHHSSGGGEEEEEETH
T ss_pred CCeEEEEEcCCcccCCChHHHHHHHHHHHHhcCCEEEEeeCCCCCCCCCchHHHHHHHHHHHHHHcCCCCccEEEEecCc
Confidence 556 99999966 788889999999843 8999999999999998877778887777776654 4556999999999
Q ss_pred hHHHHHHHHHhCCCC----ceEEEEeCCCCCC
Q 012190 252 GGCLALAVAARNPTI----DLILILSNPATSF 279 (468)
Q Consensus 252 GG~ia~~~a~~~P~~----v~~lVli~p~~~~ 279 (468)
||.+|+.+|.++|+. +.++|+++|....
T Consensus 159 GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~ 190 (322)
T 3k6k_A 159 GGGLTTASMLKAKEDGLPMPAGLVMLSPFVDL 190 (322)
T ss_dssp HHHHHHHHHHHHHHTTCCCCSEEEEESCCCCT
T ss_pred cHHHHHHHHHHHHhcCCCCceEEEEecCCcCc
Confidence 999999999987765 9999999997754
|
| >1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.69 E-value=9.8e-17 Score=158.72 Aligned_cols=102 Identities=19% Similarity=0.002 Sum_probs=79.2
Q ss_pred CCCeEEEeCCCC---Cchh--hHHHhHhhhc-CCeEEEEecCCCC----CCCChHHHHHHHHHHHHHHhhc---CCCCcE
Q 012190 178 GSPTLLFLPGID---GLGL--GLILHHKPLG-KAFEVRCLHIPVY----DRTPFEGLVKFVEETVRREHAS---SPEKPI 244 (468)
Q Consensus 178 ~~p~lV~lHG~~---~s~~--~~~~~~~~L~-~~~~V~~~D~~G~----G~Ss~~~~~~dl~~~i~~~~~~---~~~~~i 244 (468)
+.|+||++||.+ ++.. .|..+...|. .+|.|+++|+||+ +.........|+..+++.+... .+..+|
T Consensus 108 ~~p~vv~iHGgg~~~g~~~~~~~~~~~~~la~~g~~vv~~d~r~~gg~~~~~~~~~~~~D~~~~~~~v~~~~~~~~~~~i 187 (361)
T 1jkm_A 108 VLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAEGHHPFPSGVEDCLAAVLWVDEHRESLGLSGV 187 (361)
T ss_dssp CEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETTEECCTTHHHHHHHHHHHHHHHTHHHHTEEEE
T ss_pred CCeEEEEEcCCccccCCCcccchhHHHHHHHhCCCEEEEEecCCCCCCCCCCCCCccHHHHHHHHHHHHhhHHhcCCCeE
Confidence 358999999987 7777 8888888885 8999999999999 4444444445554444443321 233389
Q ss_pred EEEEeChhHHHHHHHHHh-----CCCCceEEEEeCCCCCC
Q 012190 245 YLVGDSFGGCLALAVAAR-----NPTIDLILILSNPATSF 279 (468)
Q Consensus 245 ~LvGhS~GG~ia~~~a~~-----~P~~v~~lVli~p~~~~ 279 (468)
+|+|||+||.+++.++.. +|+.++++|+++|....
T Consensus 188 ~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~il~~~~~~~ 227 (361)
T 1jkm_A 188 VVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISG 227 (361)
T ss_dssp EEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCC
T ss_pred EEEEECHHHHHHHHHHHHHHhcCCCcCcceEEEECCcccc
Confidence 999999999999999998 88899999999987644
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A | Back alignment and structure |
|---|
Probab=99.69 E-value=3.7e-16 Score=147.19 Aligned_cols=172 Identities=15% Similarity=0.043 Sum_probs=109.8
Q ss_pred CCCCCCc-eeeeecCCCCCCCCCCeEEEeCCCCCchh--hHHHhHhhh-cCCeEEEEecCCCCCCCC-------------
Q 012190 158 KPDGGPP-RWFCPVDCGRPLKGSPTLLFLPGIDGLGL--GLILHHKPL-GKAFEVRCLHIPVYDRTP------------- 220 (468)
Q Consensus 158 ~~dg~~~-~~~~y~~~g~~~~~~p~lV~lHG~~~s~~--~~~~~~~~L-~~~~~V~~~D~~G~G~Ss------------- 220 (468)
..||... .|+ +.+.+. ...|+||++||++++.. .+...++.| +.||.|+++|+||||.+.
T Consensus 37 ~~dG~~i~g~l-~~P~~~--~~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~rG~G~s~~~~~~~~~~~~~~ 113 (259)
T 4ao6_A 37 EVDGRTVPGVY-WSPAEG--SSDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGPGHGERASVQAGREPTDVVG 113 (259)
T ss_dssp EETTEEEEEEE-EEESSS--CCSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCCC-------------CCGGG
T ss_pred eeCCeEEEEEE-EeCCCC--CCCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccCCCCCCCCcccccccchhhh
Confidence 4466543 333 333332 23688999999998754 567788888 789999999999999772
Q ss_pred -------------hHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcc
Q 012190 221 -------------FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPL 287 (468)
Q Consensus 221 -------------~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~ 287 (468)
....+.+....++.+.......++.++|+|+||.+++.+|+..|. +++.|+..+.....
T Consensus 114 ~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~~d~~rv~~~G~S~GG~~a~~~a~~~pr-i~Aav~~~~~~~~~------- 185 (259)
T 4ao6_A 114 LDAFPRMWHEGGGTAAVIADWAAALDFIEAEEGPRPTGWWGLSMGTMMGLPVTASDKR-IKVALLGLMGVEGV------- 185 (259)
T ss_dssp STTHHHHHHHTTHHHHHHHHHHHHHHHHHHHHCCCCEEEEECTHHHHHHHHHHHHCTT-EEEEEEESCCTTST-------
T ss_pred hhhhhhhhhhhhhHHHHHHHHHHHHHHhhhccCCceEEEEeechhHHHHHHHHhcCCc-eEEEEEeccccccc-------
Confidence 122334555555555444456799999999999999999999875 55665543321000
Q ss_pred hHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHH
Q 012190 288 FPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSA 367 (468)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 367 (468)
. ..
T Consensus 186 -------~-----------------------------------~~----------------------------------- 188 (259)
T 4ao6_A 186 -------N-----------------------------------GE----------------------------------- 188 (259)
T ss_dssp -------T-----------------------------------HH-----------------------------------
T ss_pred -------c-----------------------------------cc-----------------------------------
Confidence 0 00
Q ss_pred hHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC--CcEEEEeCCCCccc
Q 012190 368 SAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ--NCIVRNFKDNGHTL 421 (468)
Q Consensus 368 ~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~--~~~~~~i~~aGH~~ 421 (468)
.......++++|+|+++|++|.++|++ .++.+++.++ +++++++++ +|..
T Consensus 189 --~~~~~a~~i~~P~Li~hG~~D~~vp~~-~~~~l~~al~~~~k~l~~~~G-~H~~ 240 (259)
T 4ao6_A 189 --DLVRLAPQVTCPVRYLLQWDDELVSLQ-SGLELFGKLGTKQKTLHVNPG-KHSA 240 (259)
T ss_dssp --HHHHHGGGCCSCEEEEEETTCSSSCHH-HHHHHHHHCCCSSEEEEEESS-CTTC
T ss_pred --chhhhhccCCCCEEEEecCCCCCCCHH-HHHHHHHHhCCCCeEEEEeCC-CCCC
Confidence 001233678999999999999999999 7999999885 567888886 6653
|
| >3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A | Back alignment and structure |
|---|
Probab=99.68 E-value=3e-16 Score=152.65 Aligned_cols=102 Identities=20% Similarity=0.137 Sum_probs=85.2
Q ss_pred CCCeEEEeCCCC---CchhhHHHhHhhhc--CCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhc-CCCCcEEEEEeCh
Q 012190 178 GSPTLLFLPGID---GLGLGLILHHKPLG--KAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHAS-SPEKPIYLVGDSF 251 (468)
Q Consensus 178 ~~p~lV~lHG~~---~s~~~~~~~~~~L~--~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~-~~~~~i~LvGhS~ 251 (468)
+.|+||++||.+ ++...|..++..|. .+|.|+++|+|+.+...+....+|+.+.++.+... ....+|+|+|||+
T Consensus 79 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~~~~~D~~~a~~~l~~~~~d~~ri~l~G~S~ 158 (322)
T 3fak_A 79 AGKAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLAPEHPFPAAVEDGVAAYRWLLDQGFKPQHLSISGDSA 158 (322)
T ss_dssp TTCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTSEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHHTCCGGGEEEEEETH
T ss_pred CccEEEEEcCCccccCChHHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEEcCc
Confidence 478999999966 67778888888884 48999999999999888877777877777776654 4456899999999
Q ss_pred hHHHHHHHHHhCCCC----ceEEEEeCCCCCC
Q 012190 252 GGCLALAVAARNPTI----DLILILSNPATSF 279 (468)
Q Consensus 252 GG~ia~~~a~~~P~~----v~~lVli~p~~~~ 279 (468)
||.+|+.+|.+.|+. ++++|+++|....
T Consensus 159 GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~ 190 (322)
T 3fak_A 159 GGGLVLAVLVSARDQGLPMPASAIPISPWADM 190 (322)
T ss_dssp HHHHHHHHHHHHHHTTCCCCSEEEEESCCCCT
T ss_pred CHHHHHHHHHHHHhcCCCCceEEEEECCEecC
Confidence 999999999887664 9999999997754
|
| >1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A | Back alignment and structure |
|---|
Probab=99.68 E-value=8.1e-17 Score=153.35 Aligned_cols=98 Identities=21% Similarity=0.148 Sum_probs=74.4
Q ss_pred CCeEEEeCCCCCch---hhHHHhHhhhcC---CeEEEEecCCCCCCCC------hHHHHHHHHHHHHHHhhcC-CCCcEE
Q 012190 179 SPTLLFLPGIDGLG---LGLILHHKPLGK---AFEVRCLHIPVYDRTP------FEGLVKFVEETVRREHASS-PEKPIY 245 (468)
Q Consensus 179 ~p~lV~lHG~~~s~---~~~~~~~~~L~~---~~~V~~~D~~G~G~Ss------~~~~~~dl~~~i~~~~~~~-~~~~i~ 245 (468)
.++|||+||++++. ..|..+.+.|.+ ++.|+++|+ |||.|+ ...+.+++.++++.+.... ..++++
T Consensus 5 ~~pvVllHG~~~~~~~~~~~~~~~~~L~~~~~g~~v~~~d~-G~g~s~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~ 83 (279)
T 1ei9_A 5 PLPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEI-GKTLREDVENSFFLNVNSQVTTVCQILAKDPKLQQGYN 83 (279)
T ss_dssp SCCEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCC-SSSHHHHHHHHHHSCHHHHHHHHHHHHHSCGGGTTCEE
T ss_pred CCcEEEECCCCCCCCCcccHHHHHHHHHHHCCCcEEEEEEe-CCCCccccccccccCHHHHHHHHHHHHHhhhhccCCEE
Confidence 45799999999988 789999999954 569999998 999763 1123344444444433211 125899
Q ss_pred EEEeChhHHHHHHHHHhCCCC-ceEEEEeCCCC
Q 012190 246 LVGDSFGGCLALAVAARNPTI-DLILILSNPAT 277 (468)
Q Consensus 246 LvGhS~GG~ia~~~a~~~P~~-v~~lVli~p~~ 277 (468)
|+||||||.+|..+|.++|+. |+++|+++++.
T Consensus 84 lvGhSmGG~ia~~~a~~~~~~~v~~lv~~~~p~ 116 (279)
T 1ei9_A 84 AMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQH 116 (279)
T ss_dssp EEEETTHHHHHHHHHHHCCSSCEEEEEEESCCT
T ss_pred EEEECHHHHHHHHHHHHcCCcccceEEEecCcc
Confidence 999999999999999999984 99999998654
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.68 E-value=1.4e-16 Score=171.36 Aligned_cols=196 Identities=15% Similarity=0.070 Sum_probs=133.8
Q ss_pred CCCeEEEeCCCCCch---hhHH--HhHhhhc-CCeEEEEecCCCCCCC-------Ch----HHHHHHHHHHHHHHhhcC-
Q 012190 178 GSPTLLFLPGIDGLG---LGLI--LHHKPLG-KAFEVRCLHIPVYDRT-------PF----EGLVKFVEETVRREHASS- 239 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~---~~~~--~~~~~L~-~~~~V~~~D~~G~G~S-------s~----~~~~~dl~~~i~~~~~~~- 239 (468)
..|+||++||.+++. ..|. .....|+ .+|.|+++|+||+|.+ .. ....+|+.+.++.+....
T Consensus 495 ~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~vv~~d~rG~g~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~ 574 (723)
T 1xfd_A 495 HYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQY 574 (723)
T ss_dssp CEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHHHHHTTTTCTTTHHHHHHHHHHHHHHSSSS
T ss_pred ccCEEEEEcCCCCccccCccccccHHHHHhhcCCEEEEEECCCCCccccHHHHHHHHhccCcccHHHHHHHHHHHHhCCC
Confidence 468999999998763 2232 3445564 6899999999999984 11 134566777777655432
Q ss_pred -CCCcEEEEEeChhHHHHHHHHHhC----CCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChh
Q 012190 240 -PEKPIYLVGDSFGGCLALAVAARN----PTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPI 314 (468)
Q Consensus 240 -~~~~i~LvGhS~GG~ia~~~a~~~----P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (468)
...+++|+||||||.+++.+|.++ |++++++|+++|....... ... + .....+.+.
T Consensus 575 ~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~v~~~~~~~~~~~------------~~~----~---~~~~~~~~~ 635 (723)
T 1xfd_A 575 IDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLY------------ASA----F---SERYLGLHG 635 (723)
T ss_dssp EEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSS------------BHH----H---HHHHHCCCS
T ss_pred cChhhEEEEEECHHHHHHHHHHHhccccCCCeEEEEEEccCCcchHHh------------hhh----c---cHhhcCCcc
Confidence 235899999999999999999999 9999999999986532110 000 0 000001110
Q ss_pred hHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCC-ceEEEEEeCCCCCC
Q 012190 315 KMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVK-AEVLVLASGKDNML 393 (468)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~-~PvLlI~G~~D~~v 393 (468)
. .... +..... ...+.+++ +|+|+++|++|..+
T Consensus 636 ~---------------~~~~-----------------~~~~~~--------------~~~~~~~~~~P~lii~G~~D~~v 669 (723)
T 1xfd_A 636 L---------------DNRA-----------------YEMTKV--------------AHRVSALEEQQFLIIHPTADEKI 669 (723)
T ss_dssp S---------------CCSS-----------------TTTTCT--------------HHHHTSCCSCEEEEEEETTCSSS
T ss_pred C---------------ChhH-----------------HHhcCh--------------hhHHhhcCCCCEEEEEeCCCCCc
Confidence 0 0000 000000 12336788 79999999999999
Q ss_pred CcHHHHHHHHHhC----CCcEEEEeCCCCccc-cccCcHHHHHHHHhcCcccc
Q 012190 394 PSEDEAKRLNNSL----QNCIVRNFKDNGHTL-LLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 394 ~~~~~~~~l~~~l----~~~~~~~i~~aGH~~-~~e~p~~~~~~I~~~~F~~r 441 (468)
|++ ..+.+.+.+ +++++++++++||.+ ..+.++++.+.+. +|+++
T Consensus 670 ~~~-~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~--~fl~~ 719 (723)
T 1xfd_A 670 HFQ-HTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSII--NFFVE 719 (723)
T ss_dssp CHH-HHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHH--HHHTT
T ss_pred CHh-HHHHHHHHHHHCCCCeEEEEECCCCcccccCcchHHHHHHHH--HHHHH
Confidence 998 688887766 467999999999998 6778888988888 56654
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.68 E-value=2.8e-16 Score=169.28 Aligned_cols=198 Identities=16% Similarity=0.070 Sum_probs=135.1
Q ss_pred CCCeEEEeCCCCCchh---hHH-HhHhhh--cCCeEEEEecCCCCCCCChH-----------HHHHHHHHHHHHHhhcC-
Q 012190 178 GSPTLLFLPGIDGLGL---GLI-LHHKPL--GKAFEVRCLHIPVYDRTPFE-----------GLVKFVEETVRREHASS- 239 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~---~~~-~~~~~L--~~~~~V~~~D~~G~G~Ss~~-----------~~~~dl~~~i~~~~~~~- 239 (468)
+.|+||++||.+++.. .|. .....| ..+|.|+++|+||+|.+... ...+|+.++++.+....
T Consensus 495 ~~p~vl~~hG~~~~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~ 574 (719)
T 1z68_A 495 KYPLLIQVYGGPCSQSVRSVFAVNWISYLASKEGMVIALVDGRGTAFQGDKLLYAVYRKLGVYEVEDQITAVRKFIEMGF 574 (719)
T ss_dssp CEEEEEEECCCTTBCCCCCCCCCCHHHHHHHTTCCEEEEEECTTBSSSCHHHHGGGTTCTTHHHHHHHHHHHHHHHTTSC
T ss_pred CccEEEEECCCCCcCcccccchhhHHHHHHhcCCeEEEEEcCCCCCCCchhhHHHHhhccCcccHHHHHHHHHHHHhcCC
Confidence 4678999999998753 232 233444 57899999999999998532 45677777777766531
Q ss_pred -CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHH
Q 012190 240 -PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAM 318 (468)
Q Consensus 240 -~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (468)
...+++++||||||.+++.+|.++|++++++|+++|....... ... + ...+.+.+.
T Consensus 575 ~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~------------~~~----~---~~~~~g~~~---- 631 (719)
T 1z68_A 575 IDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSSWEYY------------ASV----Y---TERFMGLPT---- 631 (719)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHTTSSSCCSEEEEESCCCCTTTS------------BHH----H---HHHHHCCSS----
T ss_pred CCCceEEEEEECHHHHHHHHHHHhCCCceEEEEEcCCccChHHh------------ccc----c---chhhcCCcc----
Confidence 1358999999999999999999999999999999986532110 000 0 000001110
Q ss_pred HhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCc-eEEEEEeCCCCCCCcHH
Q 012190 319 VNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKA-EVLVLASGKDNMLPSED 397 (468)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~-PvLlI~G~~D~~v~~~~ 397 (468)
... .... +... .....+.++++ |+|+++|++|..++++
T Consensus 632 -----~~~----~~~~-----------------------------~~~~--~~~~~~~~~~~~P~li~~G~~D~~v~~~- 670 (719)
T 1z68_A 632 -----KDD----NLEH-----------------------------YKNS--TVMARAEYFRNVDYLLIHGTADDNVHFQ- 670 (719)
T ss_dssp -----TTT----THHH-----------------------------HHHT--CSGGGGGGGTTSEEEEEEETTCSSSCTH-
T ss_pred -----ccc----chhh-----------------------------hhhC--CHhHHHhcCCCCcEEEEEeCCCCCcCHH-
Confidence 000 0000 0000 00123466777 8999999999999999
Q ss_pred HHHHHHHhCC----CcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 398 EAKRLNNSLQ----NCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 398 ~~~~l~~~l~----~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
..+.+.+.++ +.++++++++||.+..+.++++.+.|. .|+++
T Consensus 671 ~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~--~fl~~ 716 (719)
T 1z68_A 671 NSAQIAKALVNAQVDFQAMWYSDQNHGLSGLSTNHLYTHMT--HFLKQ 716 (719)
T ss_dssp HHHHHHHHHHHTTCCCEEEEETTCCTTCCTHHHHHHHHHHH--HHHHH
T ss_pred HHHHHHHHHHHCCCceEEEEECcCCCCCCcccHHHHHHHHH--HHHHH
Confidence 6888887664 468999999999997777888888888 55543
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A | Back alignment and structure |
|---|
Probab=99.68 E-value=4.4e-16 Score=151.28 Aligned_cols=201 Identities=14% Similarity=0.142 Sum_probs=134.2
Q ss_pred eEEEeCC--CCCchhhHHHhHhhhcCCeEEEEecCCCCCCC----------ChHHHHHHHHHHHHHHhhcCCCCcEEEEE
Q 012190 181 TLLFLPG--IDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT----------PFEGLVKFVEETVRREHASSPEKPIYLVG 248 (468)
Q Consensus 181 ~lV~lHG--~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S----------s~~~~~~dl~~~i~~~~~~~~~~~i~LvG 248 (468)
+++|+|| .+++...|..+...|..++.|+++|+||+|.+ +++++++++.+.++... +..+++|+|
T Consensus 91 ~l~~~hg~g~~~~~~~~~~l~~~L~~~~~v~~~d~~G~g~~~~~~~~~~~~~~~~~a~~~~~~i~~~~---~~~p~~l~G 167 (319)
T 2hfk_A 91 VLVGCTGTAANGGPHEFLRLSTSFQEERDFLAVPLPGYGTGTGTGTALLPADLDTALDAQARAILRAA---GDAPVVLLG 167 (319)
T ss_dssp EEEEECCCCTTCSTTTTHHHHHTTTTTCCEEEECCTTCCBC---CBCCEESSHHHHHHHHHHHHHHHH---TTSCEEEEE
T ss_pred cEEEeCCCCCCCcHHHHHHHHHhcCCCCceEEecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHhc---CCCCEEEEE
Confidence 8999998 67888899999999998999999999999976 47888888888887643 345899999
Q ss_pred eChhHHHHHHHHHhC----CCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccC
Q 012190 249 DSFGGCLALAVAARN----PTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENR 324 (468)
Q Consensus 249 hS~GG~ia~~~a~~~----P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (468)
|||||.+|+.+|.++ ++.+.++|++++...... .....+ ... +
T Consensus 168 ~S~GG~vA~~~A~~l~~~~g~~v~~lvl~d~~~~~~~-------~~~~~~-------~~~----l--------------- 214 (319)
T 2hfk_A 168 HAGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQ-------EPIEVW-------SRQ----L--------------- 214 (319)
T ss_dssp ETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTSC-------HHHHHT-------HHH----H---------------
T ss_pred ECHHHHHHHHHHHHHHHhhCCCceEEEEeCCCCCCch-------hHHHHH-------HHH----h---------------
Confidence 999999999999887 467999999998542211 000000 000 0
Q ss_pred CChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHH-HHHHH
Q 012190 325 LPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDE-AKRLN 403 (468)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~-~~~l~ 403 (468)
.+.+..... .. .....+.......... .......+++|+++++| +|..++.. . ...+.
T Consensus 215 ------~~~~~~~~~--~~--------~~~~~~~~~~~~~~~~---~~~~~~~i~~Pvl~i~g-~D~~~~~~-~~~~~~~ 273 (319)
T 2hfk_A 215 ------GEGLFAGEL--EP--------MSDARLLAMGRYARFL---AGPRPGRSSAPVLLVRA-SEPLGDWQ-EERGDWR 273 (319)
T ss_dssp ------HHHHHHTCS--SC--------CCHHHHHHHHHHHHHH---HSCCCCCCCSCEEEEEE-SSCSSCCC-GGGCCCS
T ss_pred ------hHHHHHhhc--cc--------cchHHHHHHHHHHHHH---HhCCCCCcCCCEEEEEc-CCCCCCcc-ccccchh
Confidence 000000000 00 0000000000000000 01234788999999999 99998876 4 44444
Q ss_pred HhCC-CcEEEEeCCCCccccc-cCcHHHHHHHHhcCcccc
Q 012190 404 NSLQ-NCIVRNFKDNGHTLLL-EEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 404 ~~l~-~~~~~~i~~aGH~~~~-e~p~~~~~~I~~~~F~~r 441 (468)
+..+ +.+++.++ +||+.++ ++++.+++.|. .|+.+
T Consensus 274 ~~~~~~~~~~~v~-g~H~~~~~e~~~~~~~~i~--~~L~~ 310 (319)
T 2hfk_A 274 AHWDLPHTVADVP-GDHFTMMRDHAPAVAEAVL--SWLDA 310 (319)
T ss_dssp CCCSSCSEEEEES-SCTTHHHHTCHHHHHHHHH--HHHHH
T ss_pred hcCCCCCEEEEeC-CCcHHHHHHhHHHHHHHHH--HHHHh
Confidence 4444 57999999 6999654 89999999999 45543
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.67 E-value=4.6e-16 Score=168.43 Aligned_cols=221 Identities=15% Similarity=0.062 Sum_probs=141.2
Q ss_pred CCCCCCceeeeecCCC-CCCCCCCeEEEeCCCCCchh---hHH-HhHhhh--cCCeEEEEecCCCCCCCChH--------
Q 012190 158 KPDGGPPRWFCPVDCG-RPLKGSPTLLFLPGIDGLGL---GLI-LHHKPL--GKAFEVRCLHIPVYDRTPFE-------- 222 (468)
Q Consensus 158 ~~dg~~~~~~~y~~~g-~~~~~~p~lV~lHG~~~s~~---~~~-~~~~~L--~~~~~V~~~D~~G~G~Ss~~-------- 222 (468)
..||.......+.+.+ .+....|+||++||.+++.. .|. .....| .++|.|+++|+||+|.+..+
T Consensus 480 ~~dg~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~l~~~~G~~Vv~~D~rG~g~~g~~~~~~~~~~ 559 (740)
T 4a5s_A 480 ILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRR 559 (740)
T ss_dssp EETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSCHHHHGGGTTC
T ss_pred ccCCeEEEEEEEeCCCCCCCCCccEEEEECCCCcccccccccCcCHHHHHHhcCCeEEEEEcCCCCCcCChhHHHHHHhh
Confidence 4566543333333433 12234689999999987732 222 122334 37999999999999976321
Q ss_pred ---HHHHHHHHHHHHHhhcC--CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchh
Q 012190 223 ---GLVKFVEETVRREHASS--PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDE 297 (468)
Q Consensus 223 ---~~~~dl~~~i~~~~~~~--~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~ 297 (468)
...+|+.++++.+.... ...+++|+||||||.+|+.+|.++|++++++|+++|...... . ...
T Consensus 560 ~~~~~~~D~~~~i~~l~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~-----~-------~~~ 627 (740)
T 4a5s_A 560 LGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEY-----Y-------DSV 627 (740)
T ss_dssp TTSHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGG-----S-------BHH
T ss_pred hCcccHHHHHHHHHHHHhcCCcCCccEEEEEECHHHHHHHHHHHhCCCceeEEEEcCCccchHH-----h-------hhH
Confidence 23667777777765321 126899999999999999999999999999999998653210 0 000
Q ss_pred HHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhccc
Q 012190 298 LHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHA 377 (468)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ 377 (468)
+ ...+++.+ ......+.+. .. .....+.+
T Consensus 628 ----~---~~~~~~~p------------~~~~~~~~~~------------------------------~~--~~~~~~~~ 656 (740)
T 4a5s_A 628 ----Y---TERYMGLP------------TPEDNLDHYR------------------------------NS--TVMSRAEN 656 (740)
T ss_dssp ----H---HHHHHCCS------------STTTTHHHHH------------------------------HS--CSGGGGGG
T ss_pred ----H---HHHHcCCC------------CccccHHHHH------------------------------hC--CHHHHHhc
Confidence 0 00011110 0000000000 00 00123456
Q ss_pred CCc-eEEEEEeCCCCCCCcHHHHHHHHHhCC----CcEEEEeCCCCccc-cccCcHHHHHHHHhcCcccccCC
Q 012190 378 VKA-EVLVLASGKDNMLPSEDEAKRLNNSLQ----NCIVRNFKDNGHTL-LLEEGISLLTIIKGTCKYRRSRK 444 (468)
Q Consensus 378 i~~-PvLlI~G~~D~~v~~~~~~~~l~~~l~----~~~~~~i~~aGH~~-~~e~p~~~~~~I~~~~F~~r~~~ 444 (468)
+++ |+|+++|++|..++++ ..+.+.+.+. +.+++++|++||.+ ..+.+..+.+.+. .|+.+.-.
T Consensus 657 i~~~P~Lii~G~~D~~v~~~-~~~~l~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~--~fl~~~l~ 726 (740)
T 4a5s_A 657 FKQVEYLLIHGTADDNVHFQ-QSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMS--HFIKQCFS 726 (740)
T ss_dssp GGGSEEEEEEETTCSSSCTH-HHHHHHHHHHHTTCCCEEEEETTCCTTCCSHHHHHHHHHHHH--HHHHHHTT
T ss_pred CCCCcEEEEEcCCCCccCHH-HHHHHHHHHHHCCCCeEEEEECCCCCcCCCCccHHHHHHHHH--HHHHHHcC
Confidence 776 9999999999999999 6888877663 56999999999998 6677888888888 56665443
|
| >3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.65 E-value=8.4e-16 Score=145.50 Aligned_cols=101 Identities=14% Similarity=0.172 Sum_probs=77.9
Q ss_pred CCCeEEEeCCCCCchhhHHH---hHhhh-cCCeEEEEecCCCCCCCC------------------------------hHH
Q 012190 178 GSPTLLFLPGIDGLGLGLIL---HHKPL-GKAFEVRCLHIPVYDRTP------------------------------FEG 223 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~---~~~~L-~~~~~V~~~D~~G~G~Ss------------------------------~~~ 223 (468)
+.|+||++||++++...|.. ..+.+ ..+|.|+++|+||+|.|. .+.
T Consensus 43 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~g~G~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 122 (278)
T 3e4d_A 43 PCPVVWYLSGLTCTHANVMEKGEYRRMASELGLVVVCPDTSPRGNDVPDELTNWQMGKGAGFYLDATEEPWSEHYQMYSY 122 (278)
T ss_dssp CEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCTTCTTSBTTBCTTSBCCSTTTTTTCBHHHH
T ss_pred CCCEEEEEcCCCCCccchhhcccHHHHHhhCCeEEEecCCcccCcccccccccccccCCccccccCCcCcccchhhHHHH
Confidence 47899999999999998877 33344 348999999999999761 123
Q ss_pred HHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCC
Q 012190 224 LVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSF 279 (468)
Q Consensus 224 ~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~ 279 (468)
.++++..+++.... ....+++|+||||||.+|+.+|.++|+.++++++++|....
T Consensus 123 ~~~~~~~~~~~~~~-~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~ 177 (278)
T 3e4d_A 123 VTEELPALIGQHFR-ADMSRQSIFGHSMGGHGAMTIALKNPERFKSCSAFAPIVAP 177 (278)
T ss_dssp HHTHHHHHHHHHSC-EEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCSCG
T ss_pred HHHHHHHHHHhhcC-CCcCCeEEEEEChHHHHHHHHHHhCCcccceEEEeCCcccc
Confidence 34556666665311 11268999999999999999999999999999999986643
|
| >3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=7.9e-16 Score=153.43 Aligned_cols=98 Identities=15% Similarity=0.123 Sum_probs=77.8
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCCC-----------------------------------h
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTP-----------------------------------F 221 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss-----------------------------------~ 221 (468)
+.|+|||+||++++...|..+++.| +.+|.|+++|+||+|.|. +
T Consensus 97 ~~P~Vv~~HG~~~~~~~~~~~a~~La~~Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 176 (383)
T 3d59_A 97 KYPLVVFSHGLGAFRTLYSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYLRTLKQEEETHIRNEQV 176 (383)
T ss_dssp CEEEEEEECCTTCCTTTTHHHHHHHHHTTCEEEEECCCSSCSSEEEECSSHHHHHHTCCEEEECCCCCHHHHHHHHHHHH
T ss_pred CCCEEEEcCCCCCCchHHHHHHHHHHhCceEEEEeccCCCCccceeecCCccccccCCceeeeccccCcccchhhhHHHH
Confidence 4689999999999999999999999 668999999999998752 1
Q ss_pred HHHHHHHHHHHHHHhh----------------------cCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCC
Q 012190 222 EGLVKFVEETVRREHA----------------------SSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPA 276 (468)
Q Consensus 222 ~~~~~dl~~~i~~~~~----------------------~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~ 276 (468)
+..++|+..+++.+.. .....++.++||||||.+++.++.+.| +++++|++++.
T Consensus 177 ~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~-~v~a~v~~~~~ 252 (383)
T 3d59_A 177 RQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQ-RFRCGIALDAW 252 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCC
T ss_pred HHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHHhhCC-CccEEEEeCCc
Confidence 1224566666666532 112358999999999999999988875 69999999873
|
| >3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.65 E-value=3.8e-16 Score=151.65 Aligned_cols=121 Identities=13% Similarity=0.086 Sum_probs=90.1
Q ss_pred ccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCC---CchhhHHHhHhhhc--CCeEEEEecCCCCCCCChHHHHHHHHH
Q 012190 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGID---GLGLGLILHHKPLG--KAFEVRCLHIPVYDRTPFEGLVKFVEE 230 (468)
Q Consensus 156 ~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~---~s~~~~~~~~~~L~--~~~~V~~~D~~G~G~Ss~~~~~~dl~~ 230 (468)
+...||.......|.+.+. ..|+||++||.+ ++...|..++..|. .+|.|+++|+|+.++..+....+|+.+
T Consensus 65 i~~~~G~~i~~~~~~P~~~---~~p~vv~~HGgG~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~p~~~~D~~~ 141 (317)
T 3qh4_A 65 VTGEAGRPVPVRIYRAAPT---PAPVVVYCHAGGFALGNLDTDHRQCLELARRARCAVVSVDYRLAPEHPYPAALHDAIE 141 (317)
T ss_dssp EECTTSCEEEEEEEECSCS---SEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCTTHHHHHHHH
T ss_pred ecCCCCCeEEEEEEecCCC---CCcEEEEECCCcCccCChHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCchHHHHHHH
Confidence 4455663433333334332 478999999987 67777888888884 389999999999998887777777776
Q ss_pred HHHHHhhc-----CCCCcEEEEEeChhHHHHHHHHHhCCC----CceEEEEeCCCCCC
Q 012190 231 TVRREHAS-----SPEKPIYLVGDSFGGCLALAVAARNPT----IDLILILSNPATSF 279 (468)
Q Consensus 231 ~i~~~~~~-----~~~~~i~LvGhS~GG~ia~~~a~~~P~----~v~~lVli~p~~~~ 279 (468)
.++.+... ....+|+|+|||+||.+|+.+|.++++ .+.++++++|....
T Consensus 142 a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~ 199 (317)
T 3qh4_A 142 VLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVLDD 199 (317)
T ss_dssp HHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCEEEEESCCCCS
T ss_pred HHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeEEEEECceecC
Confidence 66665532 123589999999999999999987655 49999999997754
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.65 E-value=2e-15 Score=162.21 Aligned_cols=226 Identities=15% Similarity=0.135 Sum_probs=138.8
Q ss_pred ccCCCCCCceeeeecCCC-CCCCCCCeEEEeCCCCCchh--hHHHhHhhh-cCCeEEEEecCCCCCCCC-----------
Q 012190 156 IIKPDGGPPRWFCPVDCG-RPLKGSPTLLFLPGIDGLGL--GLILHHKPL-GKAFEVRCLHIPVYDRTP----------- 220 (468)
Q Consensus 156 ~~~~dg~~~~~~~y~~~g-~~~~~~p~lV~lHG~~~s~~--~~~~~~~~L-~~~~~V~~~D~~G~G~Ss----------- 220 (468)
+...||.......+.+.+ .+....|+||++||.++... .|......| .++|.|+++|+||+|.+.
T Consensus 422 ~~~~dg~~i~~~~~~p~~~~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~ 501 (695)
T 2bkl_A 422 YASKDGTKVPMFVVHRKDLKRDGNAPTLLYGYGGFNVNMEANFRSSILPWLDAGGVYAVANLRGGGEYGKAWHDAGRLDK 501 (695)
T ss_dssp EECTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCGGGHHHHHTTCEEEEECCTTSSTTCHHHHHTTSGGG
T ss_pred EECCCCCEEEEEEEECCCCCCCCCccEEEEECCCCccccCCCcCHHHHHHHhCCCEEEEEecCCCCCcCHHHHHhhHhhc
Confidence 345566543322222322 11235789999999766554 455555545 789999999999988762
Q ss_pred hHHHHHHHHHHHHHHhhcC--CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhH
Q 012190 221 FEGLVKFVEETVRREHASS--PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDEL 298 (468)
Q Consensus 221 ~~~~~~dl~~~i~~~~~~~--~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~ 298 (468)
.....+|+.++++.+.... ...+++++|||+||.+++.++.++|++++++|+.+|........ ..+.
T Consensus 502 ~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~---------~~~~-- 570 (695)
T 2bkl_A 502 KQNVFDDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPELYGAVVCAVPLLDMVRYH---------LFGS-- 570 (695)
T ss_dssp THHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGG---------GSTT--
T ss_pred CCCcHHHHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCCcceEEEEEcCCccchhhcc---------ccCC--
Confidence 2334566666666665332 24589999999999999999999999999999998865432100 0000
Q ss_pred HhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccC
Q 012190 299 HCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAV 378 (468)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i 378 (468)
. ..+.. ..+.+ ..+ + ....+..... ...+..+
T Consensus 571 ~---~~~~~-~~g~~-----------~~~---------------------------~----~~~~~~~~sp--~~~~~~~ 602 (695)
T 2bkl_A 571 G---RTWIP-EYGTA-----------EKP---------------------------E----DFKTLHAYSP--YHHVRPD 602 (695)
T ss_dssp G---GGGHH-HHCCT-----------TSH---------------------------H----HHHHHHHHCG--GGCCCSS
T ss_pred C---cchHH-HhCCC-----------CCH---------------------------H----HHHHHHhcCh--Hhhhhhc
Confidence 0 00000 00000 000 0 0001111000 1233444
Q ss_pred C--ceEEEEEeCCCCCCCcHHHHHHHHHhCCC-------cEEEEeCCCCcccc--ccCcHHHHHHHHhcCcccccC
Q 012190 379 K--AEVLVLASGKDNMLPSEDEAKRLNNSLQN-------CIVRNFKDNGHTLL--LEEGISLLTIIKGTCKYRRSR 443 (468)
Q Consensus 379 ~--~PvLlI~G~~D~~v~~~~~~~~l~~~l~~-------~~~~~i~~aGH~~~--~e~p~~~~~~I~~~~F~~r~~ 443 (468)
+ +|+|+++|++|..+++. +.+++.+.++. +++++++++||.+. .+++.+....+. .|+.+.-
T Consensus 603 ~~~~P~Li~~G~~D~~v~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~--~fl~~~l 675 (695)
T 2bkl_A 603 VRYPALLMMAADHDDRVDPM-HARKFVAAVQNSPGNPATALLRIEANAGHGGADQVAKAIESSVDLY--SFLFQVL 675 (695)
T ss_dssp CCCCEEEEEEETTCSSSCTH-HHHHHHHHHHTSTTCCSCEEEEEETTCBTTBCSCHHHHHHHHHHHH--HHHHHHT
T ss_pred CCCCCEEEEeeCCCCCCChH-HHHHHHHHHHhhccCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHH--HHHHHHc
Confidence 4 69999999999999999 78888887643 78999999999984 344555555555 5665543
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=1.8e-15 Score=144.75 Aligned_cols=100 Identities=14% Similarity=0.044 Sum_probs=86.4
Q ss_pred CCCeEEEeCCCCCch-hhHH-HhHhhh-cCCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHH
Q 012190 178 GSPTLLFLPGIDGLG-LGLI-LHHKPL-GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGC 254 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~-~~~~-~~~~~L-~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ 254 (468)
.+++|||+||++++. ..|. .+.+.| ..+|+|+++|+||||.++.+..++++.++++.+....+.++++||||||||.
T Consensus 64 ~~~pVVLvHG~~~~~~~~w~~~l~~~L~~~Gy~V~a~DlpG~G~~~~~~~~~~la~~I~~l~~~~g~~~v~LVGHSmGGl 143 (316)
T 3icv_A 64 VSKPILLVPGTGTTGPQSFDSNWIPLSAQLGYTPCWISPPPFMLNDTQVNTEYMVNAITTLYAGSGNNKLPVLTWSQGGL 143 (316)
T ss_dssp CSSEEEEECCTTCCHHHHHTTTHHHHHHHTTCEEEEECCTTTTCSCHHHHHHHHHHHHHHHHHHTTSCCEEEEEETHHHH
T ss_pred CCCeEEEECCCCCCcHHHHHHHHHHHHHHCCCeEEEecCCCCCCCcHHHHHHHHHHHHHHHHHHhCCCceEEEEECHHHH
Confidence 367899999999998 6898 889999 5689999999999999998887888888887776666667999999999999
Q ss_pred HHHHHHHhC---CCCceEEEEeCCCC
Q 012190 255 LALAVAARN---PTIDLILILSNPAT 277 (468)
Q Consensus 255 ia~~~a~~~---P~~v~~lVli~p~~ 277 (468)
++..++..+ +++|+++|+++|+.
T Consensus 144 vA~~al~~~p~~~~~V~~lV~lapp~ 169 (316)
T 3icv_A 144 VAQWGLTFFPSIRSKVDRLMAFAPDY 169 (316)
T ss_dssp HHHHHHHHCGGGTTTEEEEEEESCCT
T ss_pred HHHHHHHhccccchhhceEEEECCCC
Confidence 998777765 58999999999865
|
| >4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=4.9e-15 Score=141.23 Aligned_cols=156 Identities=21% Similarity=0.253 Sum_probs=114.2
Q ss_pred CCCCeEEEeCCCCCchhhHHHhHhhhcC---CeEEEEecCC------CCCCC----------C-------hHHHHHHHHH
Q 012190 177 KGSPTLLFLPGIDGLGLGLILHHKPLGK---AFEVRCLHIP------VYDRT----------P-------FEGLVKFVEE 230 (468)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~~~~~~~L~~---~~~V~~~D~~------G~G~S----------s-------~~~~~~dl~~ 230 (468)
+..|+|||+||+|++...|..+.+.|.. ++.+++++-| |.|.+ . +.+.++++.+
T Consensus 64 ~~~plVI~LHG~G~~~~~~~~~~~~l~~~~~~~~~v~P~Ap~~~~~~~~G~~Wfd~~~~~~~~~~~~~~~~~~~~~~l~~ 143 (285)
T 4fhz_A 64 EATSLVVFLHGYGADGADLLGLAEPLAPHLPGTAFVAPDAPEPCRANGFGFQWFPIPWLDGSSETAAAEGMAAAARDLDA 143 (285)
T ss_dssp CCSEEEEEECCTTBCHHHHHTTHHHHGGGSTTEEEEEECCSEECTTSSSCEESSCCHHHHCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEcCCCCCHHHHHHHHHHHHHhCCCeEEEecCCCcccccCCCcccccccccccCcccchhhHHHHHHHHHHHH
Confidence 3578999999999999999998888843 5778887654 34422 1 2333455666
Q ss_pred HHHHHhhc--CCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhh
Q 012190 231 TVRREHAS--SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSY 308 (468)
Q Consensus 231 ~i~~~~~~--~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (468)
+++.+... .+.++|+|+|+|+||.+|+.++.++|+.+.++|.+++.... +
T Consensus 144 ~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~~---------------~------------- 195 (285)
T 4fhz_A 144 FLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLA---------------P------------- 195 (285)
T ss_dssp HHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCSC---------------H-------------
T ss_pred HHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCccC---------------c-------------
Confidence 66654432 34568999999999999999999999999999998763210 0
Q ss_pred hcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeC
Q 012190 309 VMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASG 388 (468)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~ 388 (468)
..+ ......++|++++||+
T Consensus 196 -----------------------~~~--------------------------------------~~~~~~~~Pvl~~hG~ 214 (285)
T 4fhz_A 196 -----------------------ERL--------------------------------------AEEARSKPPVLLVHGD 214 (285)
T ss_dssp -----------------------HHH--------------------------------------HHHCCCCCCEEEEEET
T ss_pred -----------------------hhh--------------------------------------hhhhhhcCcccceeeC
Confidence 000 0003446899999999
Q ss_pred CCCCCCcHHHHHHHHHhCC----CcEEEEeCCCCcccc
Q 012190 389 KDNMLPSEDEAKRLNNSLQ----NCIVRNFKDNGHTLL 422 (468)
Q Consensus 389 ~D~~v~~~~~~~~l~~~l~----~~~~~~i~~aGH~~~ 422 (468)
+|+++|.+ ..+.+.+.+. +.+++++++.||.+.
T Consensus 215 ~D~~Vp~~-~~~~~~~~L~~~g~~~~~~~y~g~gH~i~ 251 (285)
T 4fhz_A 215 ADPVVPFA-DMSLAGEALAEAGFTTYGHVMKGTGHGIA 251 (285)
T ss_dssp TCSSSCTH-HHHHHHHHHHHTTCCEEEEEETTCCSSCC
T ss_pred CCCCcCHH-HHHHHHHHHHHCCCCEEEEEECCCCCCCC
Confidence 99999999 6777776553 678999999999874
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.64 E-value=2.6e-15 Score=162.52 Aligned_cols=203 Identities=16% Similarity=0.104 Sum_probs=121.7
Q ss_pred CCCeEEEeCCCCCchh--hHHHhHhhh-cCCeEEEEecCCCCCCCC--h---------HHHHHHHHHHHHHHhhc--CCC
Q 012190 178 GSPTLLFLPGIDGLGL--GLILHHKPL-GKAFEVRCLHIPVYDRTP--F---------EGLVKFVEETVRREHAS--SPE 241 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~--~~~~~~~~L-~~~~~V~~~D~~G~G~Ss--~---------~~~~~dl~~~i~~~~~~--~~~ 241 (468)
..|+||++||.++... .|......| .++|.|+++|+||+|.+. + ....+|+.+.++.+... ...
T Consensus 487 ~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~ 566 (741)
T 1yr2_A 487 PLPTLLYGYGGFNVALTPWFSAGFMTWIDSGGAFALANLRGGGEYGDAWHDAGRRDKKQNVFDDFIAAGEWLIANGVTPR 566 (741)
T ss_dssp CCCEEEECCCCTTCCCCCCCCHHHHHHHTTTCEEEEECCTTSSTTHHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSSCT
T ss_pred CCcEEEEECCCCCccCCCCcCHHHHHHHHCCcEEEEEecCCCCCCCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCh
Confidence 4789999999877654 344445555 778999999999999872 1 12345666666655433 234
Q ss_pred CcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhh
Q 012190 242 KPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNI 321 (468)
Q Consensus 242 ~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (468)
.+++++|||+||.+++.++.++|++++++|+.+|........ ..+. . ..+.. ..+++
T Consensus 567 ~ri~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~---------~~~~--~---~~~~~-~~g~~-------- 623 (741)
T 1yr2_A 567 HGLAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDMLRFD---------QFTA--G---RYWVD-DYGYP-------- 623 (741)
T ss_dssp TCEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTSGG---------GSTT--G---GGGHH-HHCCT--------
T ss_pred HHEEEEEECHHHHHHHHHHHhCchhheEEEecCCcccccccc---------CCCC--C---chhHH-HcCCC--------
Confidence 689999999999999999999999999999998865332100 0000 0 00000 00111
Q ss_pred ccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhccc-CCc-eEEEEEeCCCCCCCcHHHH
Q 012190 322 ENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHA-VKA-EVLVLASGKDNMLPSEDEA 399 (468)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~-i~~-PvLlI~G~~D~~v~~~~~~ 399 (468)
..+ +.. ..+..... ...+.. +++ |+|+++|++|..+++. ..
T Consensus 624 ---~~~-----~~~--------------------------~~~~~~sp--~~~~~~~~~~~P~Li~~G~~D~~v~~~-~~ 666 (741)
T 1yr2_A 624 ---EKE-----ADW--------------------------RVLRRYSP--YHNVRSGVDYPAILVTTADTDDRVVPG-HS 666 (741)
T ss_dssp ---TSH-----HHH--------------------------HHHHTTCG--GGCCCTTSCCCEEEEEECSCCSSSCTH-HH
T ss_pred ---CCH-----HHH--------------------------HHHHHcCc--hhhhhccCCCCCEEEEeeCCCCCCChh-HH
Confidence 000 000 00000000 123344 675 9999999999999999 78
Q ss_pred HHHHHhCCC-------cEEEEeCCCCccccccCc--HHHHHHHHhcCccccc
Q 012190 400 KRLNNSLQN-------CIVRNFKDNGHTLLLEEG--ISLLTIIKGTCKYRRS 442 (468)
Q Consensus 400 ~~l~~~l~~-------~~~~~i~~aGH~~~~e~p--~~~~~~I~~~~F~~r~ 442 (468)
.++.+.++. +++++++++||....+.+ .++.+.+. .|+.+.
T Consensus 667 ~~~~~~l~~~~~~g~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~--~fl~~~ 716 (741)
T 1yr2_A 667 FKYTAALQTAAIGPKPHLIRIETRAGHGSGKPIDKQIEETADVQ--AFLAHF 716 (741)
T ss_dssp HHHHHHHHHSCCCSSCEEEEEC---------CHHHHHHHHHHHH--HHHHHH
T ss_pred HHHHHHHhhhhcCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHH--HHHHHH
Confidence 888876654 789999999999876433 35555555 566543
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=3e-15 Score=161.23 Aligned_cols=225 Identities=13% Similarity=0.066 Sum_probs=135.3
Q ss_pred ccCCCCCCceeeeecCCC-CCCCCCCeEEEeCCCCCchhh--HHHhHhhh-c-CCeEEEEecCCCCCCCC----------
Q 012190 156 IIKPDGGPPRWFCPVDCG-RPLKGSPTLLFLPGIDGLGLG--LILHHKPL-G-KAFEVRCLHIPVYDRTP---------- 220 (468)
Q Consensus 156 ~~~~dg~~~~~~~y~~~g-~~~~~~p~lV~lHG~~~s~~~--~~~~~~~L-~-~~~~V~~~D~~G~G~Ss---------- 220 (468)
+...||.......+.+.+ .+....|+||++||.++.... |......| . ++|.|+++|+||+|.+.
T Consensus 442 ~~~~dg~~i~~~~~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~g~~~~~~~~~~ 521 (710)
T 2xdw_A 442 YPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILA 521 (710)
T ss_dssp EECTTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTTHHHHHHTTSGG
T ss_pred EEcCCCCEEEEEEEecCCCCCCCCccEEEEEcCCCCCcCCCcccHHHHHHHHhCCcEEEEEccCCCCCCChHHHHhhhhh
Confidence 345566543322222222 112347899999998766542 33333344 6 79999999999999762
Q ss_pred -hHHHHHHHHHHHHHHhhc--CCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchh
Q 012190 221 -FEGLVKFVEETVRREHAS--SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDE 297 (468)
Q Consensus 221 -~~~~~~dl~~~i~~~~~~--~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~ 297 (468)
.....+|+.+.++.+... ....+++++|||+||.+++.+|.++|++++++|+.+|.......... ....
T Consensus 522 ~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~~d~~~~~~~-------~~~~- 593 (710)
T 2xdw_A 522 NKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKY-------TIGH- 593 (710)
T ss_dssp GTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGS-------TTGG-
T ss_pred cCCchHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCccceeEEEEcCCcccHhhcccc-------CCCh-
Confidence 112345555555555433 23458999999999999999999999999999999886533111000 0000
Q ss_pred HHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcc-
Q 012190 298 LHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLH- 376 (468)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~- 376 (468)
.+... .+++ ..+ + . ...+..... ...+.
T Consensus 594 ------~~~~~-~g~~-----------~~~-----~----------------------~----~~~~~~~sp--~~~~~~ 622 (710)
T 2xdw_A 594 ------AWTTD-YGCS-----------DSK-----Q----------------------H----FEWLIKYSP--LHNVKL 622 (710)
T ss_dssp ------GGHHH-HCCT-----------TSH-----H----------------------H----HHHHHHHCG--GGCCCC
T ss_pred ------hHHHh-CCCC-----------CCH-----H----------------------H----HHHHHHhCc--Hhhhcc
Confidence 00000 0000 000 0 0 000100000 12334
Q ss_pred ----cCCc-eEEEEEeCCCCCCCcHHHHHHHHHhCCC-----------cEEEEeCCCCcccccc--CcHHHHHHHHhcCc
Q 012190 377 ----AVKA-EVLVLASGKDNMLPSEDEAKRLNNSLQN-----------CIVRNFKDNGHTLLLE--EGISLLTIIKGTCK 438 (468)
Q Consensus 377 ----~i~~-PvLlI~G~~D~~v~~~~~~~~l~~~l~~-----------~~~~~i~~aGH~~~~e--~p~~~~~~I~~~~F 438 (468)
.+++ |+|+++|++|..+++. +..++.+.++. +++++++++||.+... +..+..+.+. .|
T Consensus 623 ~~~~~~~~pP~Li~~G~~D~~v~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~--~f 699 (710)
T 2xdw_A 623 PEADDIQYPSMLLLTADHDDRVVPL-HSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMF--AF 699 (710)
T ss_dssp CSSTTCCCCEEEEEEETTCCSSCTH-HHHHHHHHHHHHTTTSTTCCSCEEEEEESSCCSSTTCCHHHHHHHHHHHH--HH
T ss_pred cccccCCCCcEEEEEeCCCCccChh-HHHHHHHHHHhhhccccCCCcCEEEEEeCCCCcCCCCCHHHHHHHHHHHH--HH
Confidence 6777 9999999999999999 68887776643 4899999999998763 2345555555 46
Q ss_pred cccc
Q 012190 439 YRRS 442 (468)
Q Consensus 439 ~~r~ 442 (468)
+.+.
T Consensus 700 l~~~ 703 (710)
T 2xdw_A 700 IARC 703 (710)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
|
| >3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.63 E-value=7e-16 Score=146.18 Aligned_cols=100 Identities=17% Similarity=0.227 Sum_probs=74.4
Q ss_pred CCCeEEEeCCCCCchhhHHHh---Hhhh-cCCeEEEEecC--CCCCCCC----------------------------hHH
Q 012190 178 GSPTLLFLPGIDGLGLGLILH---HKPL-GKAFEVRCLHI--PVYDRTP----------------------------FEG 223 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~---~~~L-~~~~~V~~~D~--~G~G~Ss----------------------------~~~ 223 (468)
..|+||++||++++...|... .+.+ ..+|.|+++|+ ||+|.+. .+.
T Consensus 44 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~rG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 123 (282)
T 3fcx_A 44 KCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMYSY 123 (282)
T ss_dssp CEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEEECSCSSCCCC--------CCCCCCTTCBCCSTTHHHHCBHHHH
T ss_pred CCCEEEEEcCCCCCccchhhcchHHHHhhcCCeEEEEeccccCccccccccccccccCCcccccccCcccccchhhHHHH
Confidence 478999999999998888765 4555 56899999999 6665421 122
Q ss_pred HHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCC
Q 012190 224 LVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (468)
Q Consensus 224 ~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~ 278 (468)
..+++..+++.... ....+++|+||||||.+|+.+|.++|+.++++|+++|...
T Consensus 124 ~~~~~~~~~~~~~~-~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~ 177 (282)
T 3fcx_A 124 VTEELPQLINANFP-VDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICN 177 (282)
T ss_dssp HHTHHHHHHHHHSS-EEEEEEEEEEETHHHHHHHHHHHTSTTTSSCEEEESCCCC
T ss_pred HHHHHHHHHHHHcC-CCccceEEEEECchHHHHHHHHHhCcccceEEEEeCCccC
Confidence 34455555553211 1235899999999999999999999999999999998653
|
| >3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.9e-14 Score=138.49 Aligned_cols=117 Identities=14% Similarity=0.108 Sum_probs=83.3
Q ss_pred CCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhH-HHhHhhh-cCCeEEEEecCC------------CC--CCCCh-
Q 012190 159 PDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGL-ILHHKPL-GKAFEVRCLHIP------------VY--DRTPF- 221 (468)
Q Consensus 159 ~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~-~~~~~~L-~~~~~V~~~D~~------------G~--G~Ss~- 221 (468)
.+|....+..|.+.+. .+..|+||++||++++...| ..+.+.+ ..+|.|+++|+| |+ |.|..
T Consensus 35 ~~~~~l~~~~~~P~~~-~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~~~p~~~~~~~g~~~g~s~~~ 113 (304)
T 3d0k_A 35 NADRPFTLNTYRPYGY-TPDRPVVVVQHGVLRNGADYRDFWIPAADRHKLLIVAPTFSDEIWPGVESYNNGRAFTAAGNP 113 (304)
T ss_dssp CTTCCEEEEEEECTTC-CTTSCEEEEECCTTCCHHHHHHHTHHHHHHHTCEEEEEECCTTTSCHHHHTTTTTCBCTTSCB
T ss_pred CCCceEEEEEEeCCCC-CCCCcEEEEeCCCCCCHHHHHHHHHHHHHHCCcEEEEeCCccccCCCccccccCccccccCCC
Confidence 4555555555555442 12578999999999999888 6667777 568999999999 66 66521
Q ss_pred ----HHHHHHHHHHHHHHhhc--CCCCcEEEEEeChhHHHHHHHHHhCCC-CceEEEEeCCC
Q 012190 222 ----EGLVKFVEETVRREHAS--SPEKPIYLVGDSFGGCLALAVAARNPT-IDLILILSNPA 276 (468)
Q Consensus 222 ----~~~~~dl~~~i~~~~~~--~~~~~i~LvGhS~GG~ia~~~a~~~P~-~v~~lVli~p~ 276 (468)
....+++.++++.+... ...++++|+||||||.+++.+|.++|+ .+.++|+.+++
T Consensus 114 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~~vl~~~~ 175 (304)
T 3d0k_A 114 RHVDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAPFHAVTAANPG 175 (304)
T ss_dssp CCGGGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTTCSEEEEESCS
T ss_pred CcccchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCceEEEEEecCc
Confidence 11223344444444332 345799999999999999999999995 79999988753
|
| >3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=4.8e-15 Score=146.79 Aligned_cols=102 Identities=17% Similarity=0.045 Sum_probs=82.8
Q ss_pred CCCeEEEeCCCCC---ch--hhHHHhHhhh-cC-CeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhc------CCCC-c
Q 012190 178 GSPTLLFLPGIDG---LG--LGLILHHKPL-GK-AFEVRCLHIPVYDRTPFEGLVKFVEETVRREHAS------SPEK-P 243 (468)
Q Consensus 178 ~~p~lV~lHG~~~---s~--~~~~~~~~~L-~~-~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~------~~~~-~ 243 (468)
..|+||++||.+. +. ..|..++..| .+ +|.|+++|+|+.+...+....+|+.+.++.+... .... +
T Consensus 111 ~~Pvvv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~Vv~~dyR~~p~~~~~~~~~D~~~a~~~l~~~~~~~~~~d~~~r 190 (365)
T 3ebl_A 111 PFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMSQPFMRSGGDAQAR 190 (365)
T ss_dssp CCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTSEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHCTTTEETTTTEEE
T ss_pred cceEEEEEcCCccccCCCchhhHHHHHHHHHHHCCCEEEEeeCCCCCCCCCcHHHHHHHHHHHHHHhCchhhhCCCCCCc
Confidence 4789999999753 22 2477788888 33 8999999999998888888888888888887633 2234 8
Q ss_pred EEEEEeChhHHHHHHHHHhCCC---CceEEEEeCCCCCC
Q 012190 244 IYLVGDSFGGCLALAVAARNPT---IDLILILSNPATSF 279 (468)
Q Consensus 244 i~LvGhS~GG~ia~~~a~~~P~---~v~~lVli~p~~~~ 279 (468)
|+|+|||+||.+|+.+|.+.++ .++++|+++|....
T Consensus 191 i~l~G~S~GG~la~~~a~~~~~~~~~~~g~vl~~p~~~~ 229 (365)
T 3ebl_A 191 VFLSGDSSGGNIAHHVAVRAADEGVKVCGNILLNAMFGG 229 (365)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTTCCCCEEEEESCCCCC
T ss_pred EEEEeeCccHHHHHHHHHHHHhcCCceeeEEEEccccCC
Confidence 9999999999999999988765 79999999997644
|
| >3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A | Back alignment and structure |
|---|
Probab=99.61 E-value=2.8e-15 Score=142.14 Aligned_cols=99 Identities=17% Similarity=0.233 Sum_probs=75.5
Q ss_pred CCCeEEEeCCCCCchhhHHHh---Hhhh-cCCeEEEEecCCCCCCC----------------------------C-hHHH
Q 012190 178 GSPTLLFLPGIDGLGLGLILH---HKPL-GKAFEVRCLHIPVYDRT----------------------------P-FEGL 224 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~---~~~L-~~~~~V~~~D~~G~G~S----------------------------s-~~~~ 224 (468)
..|+||++||++++...|... ...+ ..++.|+++|.+++|.+ . .+.+
T Consensus 46 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~pd~~~~g~~~~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~ 125 (280)
T 3i6y_A 46 KVPVLYWLSGLTCSDENFMQKAGAQRLAAELGIAIVAPDTSPRGEGVADDEGYDLGQGAGFYVNATQAPWNRHYQMYDYV 125 (280)
T ss_dssp CEEEEEEECCTTCCSSHHHHHSCCHHHHHHHTCEEEEECSSCCSTTCCCCSSTTSSTTCCTTCBCCSTTGGGTCBHHHHH
T ss_pred CccEEEEecCCCCChhHHhhcccHHHHHhhCCeEEEEeCCcccccccCcccccccccCccccccccCCCccchhhHHHHH
Confidence 478999999999998888763 3333 45799999999866542 1 2234
Q ss_pred HHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCC
Q 012190 225 VKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (468)
Q Consensus 225 ~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~ 278 (468)
.+++..+++..... ..+++|+||||||.+|+.+|.++|+.++++|+++|...
T Consensus 126 ~~~~~~~~~~~~~~--~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~ 177 (280)
T 3i6y_A 126 VNELPELIESMFPV--SDKRAIAGHSMGGHGALTIALRNPERYQSVSAFSPINN 177 (280)
T ss_dssp HTHHHHHHHHHSSE--EEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCCC
T ss_pred HHHHHHHHHHhCCC--CCCeEEEEECHHHHHHHHHHHhCCccccEEEEeCCccc
Confidence 45666666543221 26899999999999999999999999999999998654
|
| >2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.61 E-value=1.6e-14 Score=135.27 Aligned_cols=102 Identities=19% Similarity=0.158 Sum_probs=81.9
Q ss_pred CCCCeEEEeCCCCCchhhHHH--hHhhhc--CCeEEEEecCCCCCCCC-------hHHHHHHHHHHHHHHhh-c-CCCCc
Q 012190 177 KGSPTLLFLPGIDGLGLGLIL--HHKPLG--KAFEVRCLHIPVYDRTP-------FEGLVKFVEETVRREHA-S-SPEKP 243 (468)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~~~--~~~~L~--~~~~V~~~D~~G~G~Ss-------~~~~~~dl~~~i~~~~~-~-~~~~~ 243 (468)
.+.|+||++||++++...|.. .+..+. .++.|+++|+++++.++ .+.+++++..+++.... . ....+
T Consensus 39 ~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 118 (263)
T 2uz0_A 39 EDIPVLYLLHGMSGNHNSWLKRTNVERLLRGTNLIVVMPNTSNGWYTDTQYGFDYYTALAEELPQVLKRFFPNMTSKREK 118 (263)
T ss_dssp CCBCEEEEECCTTCCTTHHHHHSCHHHHTTTCCCEEEECCCTTSTTSBCTTSCBHHHHHHTHHHHHHHHHCTTBCCCGGG
T ss_pred CCCCEEEEECCCCCCHHHHHhccCHHHHHhcCCeEEEEECCCCCccccCCCcccHHHHHHHHHHHHHHHHhccccCCCCc
Confidence 357899999999999999988 566663 47888899998887653 45667788888877533 1 12368
Q ss_pred EEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCC
Q 012190 244 IYLVGDSFGGCLALAVAARNPTIDLILILSNPATSF 279 (468)
Q Consensus 244 i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~ 279 (468)
++|+|||+||.+|+.+|. +|++++++|+++|....
T Consensus 119 i~l~G~S~Gg~~a~~~a~-~~~~~~~~v~~~~~~~~ 153 (263)
T 2uz0_A 119 TFIAGLSMGGYGCFKLAL-TTNRFSHAASFSGALSF 153 (263)
T ss_dssp EEEEEETHHHHHHHHHHH-HHCCCSEEEEESCCCCS
T ss_pred eEEEEEChHHHHHHHHHh-CccccceEEEecCCcch
Confidence 999999999999999999 99999999999987654
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=1.3e-14 Score=155.85 Aligned_cols=204 Identities=14% Similarity=0.086 Sum_probs=122.0
Q ss_pred CCCeEEEeCCCCCchh--hHHHhHhhh-cCCeEEEEecCCCCCCCC-----------hHHHHHHHHHHHHHHhhc--CCC
Q 012190 178 GSPTLLFLPGIDGLGL--GLILHHKPL-GKAFEVRCLHIPVYDRTP-----------FEGLVKFVEETVRREHAS--SPE 241 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~--~~~~~~~~L-~~~~~V~~~D~~G~G~Ss-----------~~~~~~dl~~~i~~~~~~--~~~ 241 (468)
+.|+||++||..+... .|......| .++|.|+++|+||+|... .....+|+.+.++.+... ...
T Consensus 453 ~~P~ll~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 532 (693)
T 3iuj_A 453 SNPTILYGYGGFDVSLTPSFSVSVANWLDLGGVYAVANLRGGGEYGQAWHLAGTQQNKQNVFDDFIAAAEYLKAEGYTRT 532 (693)
T ss_dssp CCCEEEECCCCTTCCCCCCCCHHHHHHHHTTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCG
T ss_pred CccEEEEECCCCCcCCCCccCHHHHHHHHCCCEEEEEeCCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCc
Confidence 5799999999766433 344444455 789999999999988762 112345555555555433 223
Q ss_pred CcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhh
Q 012190 242 KPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNI 321 (468)
Q Consensus 242 ~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (468)
.++.++|||+||.+++.++.++|++++++|+..|........ ..... ..+.. ..+++
T Consensus 533 ~ri~i~G~S~GG~la~~~~~~~p~~~~a~v~~~~~~d~~~~~---------~~~~~-----~~~~~-~~g~p-------- 589 (693)
T 3iuj_A 533 DRLAIRGGSNGGLLVGAVMTQRPDLMRVALPAVGVLDMLRYH---------TFTAG-----TGWAY-DYGTS-------- 589 (693)
T ss_dssp GGEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCCTTTGG---------GSGGG-----GGCHH-HHCCT--------
T ss_pred ceEEEEEECHHHHHHHHHHhhCccceeEEEecCCcchhhhhc---------cCCCc-----hhHHH-HcCCc--------
Confidence 689999999999999999999999999999998865431110 00000 00000 00110
Q ss_pred ccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhccc-CCce-EEEEEeCCCCCCCcHHHH
Q 012190 322 ENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHA-VKAE-VLVLASGKDNMLPSEDEA 399 (468)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~-i~~P-vLlI~G~~D~~v~~~~~~ 399 (468)
. .... ....+..... ...+.. +++| +|+++|++|..+++. +.
T Consensus 590 ---~---------------------------~~~~---~~~~~~~~sp--~~~~~~~~~~Pp~Li~~G~~D~~v~~~-~~ 633 (693)
T 3iuj_A 590 ---A---------------------------DSEA---MFDYLKGYSP--LHNVRPGVSYPSTMVTTADHDDRVVPA-HS 633 (693)
T ss_dssp ---T---------------------------SCHH---HHHHHHHHCH--HHHCCTTCCCCEEEEEEESSCSSSCTH-HH
T ss_pred ---c---------------------------CHHH---HHHHHHhcCH--HHhhcccCCCCceeEEecCCCCCCChh-HH
Confidence 0 0000 0011111111 134456 7887 999999999999999 78
Q ss_pred HHHHHhCC-------CcEEEEeCCCCccccc--cCcHHHHHHHHhcCccccc
Q 012190 400 KRLNNSLQ-------NCIVRNFKDNGHTLLL--EEGISLLTIIKGTCKYRRS 442 (468)
Q Consensus 400 ~~l~~~l~-------~~~~~~i~~aGH~~~~--e~p~~~~~~I~~~~F~~r~ 442 (468)
.++.+.++ .+++++++++||.... ++..+..+.+. .|+.+.
T Consensus 634 ~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~--~fl~~~ 683 (693)
T 3iuj_A 634 FKFAATLQADNAGPHPQLIRIETNAGHGAGTPVAKLIEQSADIY--AFTLYE 683 (693)
T ss_dssp HHHHHHHHHHCCSSSCEEEEEEC-------CHHHHHHHHHHHHH--HHHHHH
T ss_pred HHHHHHHHhhCCCCCCEEEEEeCCCCCCCcccHHHHHHHHHHHH--HHHHHH
Confidence 87777663 3588999999999865 34444555555 466553
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A | Back alignment and structure |
|---|
Probab=99.60 E-value=1.5e-14 Score=143.93 Aligned_cols=168 Identities=18% Similarity=0.196 Sum_probs=113.7
Q ss_pred ccCC-CCCCceeeeecCCC-CCCCCCCeEEEeCCCCCchhhHH----------HhH-h--hhcCCeEEEEecCCCCCCCC
Q 012190 156 IIKP-DGGPPRWFCPVDCG-RPLKGSPTLLFLPGIDGLGLGLI----------LHH-K--PLGKAFEVRCLHIPVYDRTP 220 (468)
Q Consensus 156 ~~~~-dg~~~~~~~y~~~g-~~~~~~p~lV~lHG~~~s~~~~~----------~~~-~--~L~~~~~V~~~D~~G~G~Ss 220 (468)
+... +|.......|.+.+ .+....|+||++||.+++...+. .+. . ....++.|+++|.||.+...
T Consensus 149 ~~~~~dg~~l~~~v~~P~~~~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vv~pd~~g~~~~~ 228 (380)
T 3doh_A 149 FKDPETGVEIPYRLFVPKDVNPDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQCPPNSSWS 228 (380)
T ss_dssp EECTTTCCEEEEEEECCSSCCTTSCEEEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHHHHTTSCCEEEEECCCTTCCSB
T ss_pred eccCCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCCCCchhhhhhccccceeecCccccccCCEEEEEecCCCCCccc
Confidence 3344 66655555555554 22234689999999986643211 010 0 11345789999999765421
Q ss_pred -----------hHHHHHHHHHHHHHHhhcCC--CCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcc
Q 012190 221 -----------FEGLVKFVEETVRREHASSP--EKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPL 287 (468)
Q Consensus 221 -----------~~~~~~dl~~~i~~~~~~~~--~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~ 287 (468)
.....+++.++++.+....+ ..+++|+||||||.+++.+|.++|+.++++|+++|...
T Consensus 229 ~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~sg~~~--------- 299 (380)
T 3doh_A 229 TLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGGGD--------- 299 (380)
T ss_dssp TTTTCSSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCC---------
T ss_pred ccccccccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceEEEEecCCCC---------
Confidence 13344445555555444343 24799999999999999999999999999999988530
Q ss_pred hHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHH
Q 012190 288 FPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSA 367 (468)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 367 (468)
+
T Consensus 300 -------------------------~------------------------------------------------------ 300 (380)
T 3doh_A 300 -------------------------V------------------------------------------------------ 300 (380)
T ss_dssp -------------------------G------------------------------------------------------
T ss_pred -------------------------h------------------------------------------------------
Confidence 0
Q ss_pred hHHHhhhcccC-CceEEEEEeCCCCCCCcHHHHHHHHHhCC----CcEEEEeCCC
Q 012190 368 SAYANSRLHAV-KAEVLVLASGKDNMLPSEDEAKRLNNSLQ----NCIVRNFKDN 417 (468)
Q Consensus 368 ~~~~~~~l~~i-~~PvLlI~G~~D~~v~~~~~~~~l~~~l~----~~~~~~i~~a 417 (468)
..+..+ ++|+|+++|++|..+|++ ..+.+.+.+. ++++++++++
T Consensus 301 -----~~~~~~~~~P~lii~G~~D~~vp~~-~~~~~~~~l~~~g~~~~~~~~~~~ 349 (380)
T 3doh_A 301 -----SKVERIKDIPIWVFHAEDDPVVPVE-NSRVLVKKLAEIGGKVRYTEYEKG 349 (380)
T ss_dssp -----GGGGGGTTSCEEEEEETTCSSSCTH-HHHHHHHHHHHTTCCEEEEEECTT
T ss_pred -----hhhhhccCCCEEEEecCCCCccCHH-HHHHHHHHHHHCCCceEEEEecCC
Confidence 011223 379999999999999998 6887777664 5789999999
|
| >4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.59 E-value=1.6e-14 Score=134.77 Aligned_cols=160 Identities=14% Similarity=0.166 Sum_probs=113.1
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhc---CCeEEEEecCCCC--------------CCC--------------ChHHHHH
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLG---KAFEVRCLHIPVY--------------DRT--------------PFEGLVK 226 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~---~~~~V~~~D~~G~--------------G~S--------------s~~~~~~ 226 (468)
.+++|||+||+|+++..|..+.+.|. ..+.+++++-|.. ... .+...++
T Consensus 36 ~~~~VI~LHG~G~~~~dl~~l~~~l~~~~~~~~~i~P~Ap~~~~~~~~~~~~~~Wf~~~~~~~~~~~~~~d~~~i~~~~~ 115 (246)
T 4f21_A 36 ARFCVIWLHGLGADGHDFVDIVNYFDVSLDEIRFIFPHADIIPVTINMGMQMRAWYDIKSLDANSLNRVVDVEGINSSIA 115 (246)
T ss_dssp CCEEEEEEEC--CCCCCGGGGGGGCCSCCTTEEEEEECGGGSCTTTHHHHHHHSCTTCCCC---CGGGGSCCC-CHHHHH
T ss_pred CCeEEEEEcCCCCCHHHHHHHHHHhhhcCCCeEEEeCCCCccccccCCCCCcccccccccccccchhhhhhHHHHHHHHH
Confidence 46799999999999999999988884 3578888765321 110 1345556
Q ss_pred HHHHHHHHHhhc-CCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHH
Q 012190 227 FVEETVRREHAS-SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYL 305 (468)
Q Consensus 227 dl~~~i~~~~~~-~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (468)
.+..+++..... .+.++++|+|+|+||++|+.++.++|+.+.++|.+++....
T Consensus 116 ~i~~li~~~~~~gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~~sG~lp~-------------------------- 169 (246)
T 4f21_A 116 KVNKLIDSQVNQGIASENIILAGFSQGGIIATYTAITSQRKLGGIMALSTYLPA-------------------------- 169 (246)
T ss_dssp HHHHHHHHHHHC-CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEEESCCCTT--------------------------
T ss_pred HHHHHHHHHHHcCCChhcEEEEEeCchHHHHHHHHHhCccccccceehhhccCc--------------------------
Confidence 666666654332 35678999999999999999999999999999999874311
Q ss_pred hhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEE
Q 012190 306 LSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVL 385 (468)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI 385 (468)
...+.... .-...++|++++
T Consensus 170 -------------------------~~~~~~~~-----------------------------------~~~~~~~Pvl~~ 189 (246)
T 4f21_A 170 -------------------------WDNFKGKI-----------------------------------TSINKGLPILVC 189 (246)
T ss_dssp -------------------------HHHHSTTC-----------------------------------CGGGTTCCEEEE
T ss_pred -------------------------cccccccc-----------------------------------cccccCCchhhc
Confidence 00000000 002236799999
Q ss_pred EeCCCCCCCcHHHHHHHHHhCC----CcEEEEeCCCCcccccc
Q 012190 386 ASGKDNMLPSEDEAKRLNNSLQ----NCIVRNFKDNGHTLLLE 424 (468)
Q Consensus 386 ~G~~D~~v~~~~~~~~l~~~l~----~~~~~~i~~aGH~~~~e 424 (468)
||++|+++|.+ ..++..+.+. +.++..+++.||.+..|
T Consensus 190 HG~~D~vVp~~-~~~~~~~~L~~~g~~v~~~~y~g~gH~i~~~ 231 (246)
T 4f21_A 190 HGTDDQVLPEV-LGHDLSDKLKVSGFANEYKHYVGMQHSVCME 231 (246)
T ss_dssp EETTCSSSCHH-HHHHHHHHHHTTTCCEEEEEESSCCSSCCHH
T ss_pred ccCCCCccCHH-HHHHHHHHHHHCCCCeEEEEECCCCCccCHH
Confidence 99999999998 6777777663 56889999999987543
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.59 E-value=2e-14 Score=155.61 Aligned_cols=230 Identities=14% Similarity=0.102 Sum_probs=136.0
Q ss_pred ccCCCCCCc-eeeeecCCCCCCCCCCeEEEeCCCCCchh--hHHHhHhhh-cCCeEEEEecCCCCCCCC--h--------
Q 012190 156 IIKPDGGPP-RWFCPVDCGRPLKGSPTLLFLPGIDGLGL--GLILHHKPL-GKAFEVRCLHIPVYDRTP--F-------- 221 (468)
Q Consensus 156 ~~~~dg~~~-~~~~y~~~g~~~~~~p~lV~lHG~~~s~~--~~~~~~~~L-~~~~~V~~~D~~G~G~Ss--~-------- 221 (468)
+...||... .|+.+.....+....|+||++||.++... .|......| .++|.|+++|+||+|.+. +
T Consensus 485 ~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~HGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~G~~~~~~~~~~~ 564 (751)
T 2xe4_A 485 ATAPDQTKIPLSVVYHKDLDMSQPQPCMLYGYGSYGLSMDPQFSIQHLPYCDRGMIFAIAHIRGGSELGRAWYEIGAKYL 564 (751)
T ss_dssp EECTTCCEEEEEEEEETTSCTTSCCCEEEECCCCTTCCCCCCCCGGGHHHHTTTCEEEEECCTTSCTTCTHHHHTTSSGG
T ss_pred EECCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCcCCCCcchHHHHHHHhCCcEEEEEeeCCCCCcCcchhhcccccc
Confidence 345566543 34433222111234789999999877654 455555666 678999999999998642 1
Q ss_pred --HHHHHHHHHHHHHHhhc--CCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchh
Q 012190 222 --EGLVKFVEETVRREHAS--SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDE 297 (468)
Q Consensus 222 --~~~~~dl~~~i~~~~~~--~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~ 297 (468)
....+|+.+.++.+... ....++.++|+|+||.+++.++.++|++++++|+.+|..... .... ...
T Consensus 565 ~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~~p~~~~a~v~~~~~~d~~--------~~~~--~~~ 634 (751)
T 2xe4_A 565 TKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMRPDLFKVALAGVPFVDVM--------TTMC--DPS 634 (751)
T ss_dssp GTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCHH--------HHHT--CTT
T ss_pred ccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHhCchheeEEEEeCCcchHH--------hhhc--ccC
Confidence 13345555555555433 234689999999999999999999999999999998854210 0000 000
Q ss_pred HHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhccc
Q 012190 298 LHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHA 377 (468)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ 377 (468)
. ++. ...+ ..+. .+.. ......+..... ...+.+
T Consensus 635 ----~----------~~~---------------~~~~-~~~g------------~p~~--~~~~~~~~~~sp--~~~~~~ 668 (751)
T 2xe4_A 635 ----I----------PLT---------------TGEW-EEWG------------NPNE--YKYYDYMLSYSP--MDNVRA 668 (751)
T ss_dssp ----S----------TTH---------------HHHT-TTTC------------CTTS--HHHHHHHHHHCT--GGGCCS
T ss_pred ----c----------ccc---------------hhhH-HHcC------------CCCC--HHHHHHHHhcCh--hhhhcc
Confidence 0 000 0000 0000 0000 000001111100 134566
Q ss_pred CCce-EEEEEeCCCCCCCcHHHHHHHHHhCCCc-------EEEEeCCCCccccccCcHHHHHHHHhcCccccc
Q 012190 378 VKAE-VLVLASGKDNMLPSEDEAKRLNNSLQNC-------IVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRS 442 (468)
Q Consensus 378 i~~P-vLlI~G~~D~~v~~~~~~~~l~~~l~~~-------~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r~ 442 (468)
+++| +|+++|++|..+++. +..++.+.++.. .+.+++++||....+.++.+........|+.+.
T Consensus 669 ~~~Pp~Lii~G~~D~~vp~~-~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~Fl~~~ 740 (751)
T 2xe4_A 669 QEYPNIMVQCGLHDPRVAYW-EPAKWVSKLRECKTDNNEILLNIDMESGHFSAKDRYKFWKESAIQQAFVCKH 740 (751)
T ss_dssp SCCCEEEEEEETTCSSSCTH-HHHHHHHHHHHHCCSCCCEEEEEETTCCSSCCSSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCceeEEeeCCCCCCCHH-HHHHHHHHHHhcCCCCceEEEEECCCCCCCCcCChhHHHHHHHHHHHHHHHH
Confidence 8897 999999999999999 788888766422 344559999998866555444332333566553
|
| >3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.58 E-value=2.6e-14 Score=135.45 Aligned_cols=99 Identities=16% Similarity=0.218 Sum_probs=75.2
Q ss_pred CCCeEEEeCCCCCchhhHHH---hHhhh-cCCeEEEEecCCCCCCC----------------------------C-hHHH
Q 012190 178 GSPTLLFLPGIDGLGLGLIL---HHKPL-GKAFEVRCLHIPVYDRT----------------------------P-FEGL 224 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~---~~~~L-~~~~~V~~~D~~G~G~S----------------------------s-~~~~ 224 (468)
..|+||++||++++...|.. ....+ ..++.|+++|.+++|.+ . .+.+
T Consensus 44 ~~P~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~~g~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~ 123 (280)
T 3ls2_A 44 KVPVLYWLSGLTCTDENFMQKAGAFKKAAELGIAIVAPDTSPRGDNVPNEDSYDFAQGAGFYVNATQAPYNTHFNMYDYV 123 (280)
T ss_dssp CEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCSCTTSSTTCCTTCBCCSTTTTTTCBHHHHH
T ss_pred CcCEEEEeCCCCCChhhhhcchhHHHHHhhCCeEEEEeCCcccccccccccccccccCCccccccccccccccccHHHHH
Confidence 46899999999999888765 33444 45899999998865532 1 2334
Q ss_pred HHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCC
Q 012190 225 VKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (468)
Q Consensus 225 ~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~ 278 (468)
.+++..+++..... ..+++|+||||||.+|+.+|.++|+.++++++++|...
T Consensus 124 ~~~~~~~i~~~~~~--~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~ 175 (280)
T 3ls2_A 124 VNELPALIEQHFPV--TSTKAISGHSMGGHGALMIALKNPQDYVSASAFSPIVN 175 (280)
T ss_dssp HTHHHHHHHHHSSE--EEEEEEEEBTHHHHHHHHHHHHSTTTCSCEEEESCCSC
T ss_pred HHHHHHHHHhhCCC--CCCeEEEEECHHHHHHHHHHHhCchhheEEEEecCccC
Confidence 45666666654221 26899999999999999999999999999999998653
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=99.57 E-value=4e-14 Score=150.93 Aligned_cols=209 Identities=17% Similarity=0.065 Sum_probs=128.2
Q ss_pred ccCCCCCCceeeeecCCC-CCCCCCCeEEEeCCCCCchh--hHHHhH-hhh-cCCeEEEEecCCCCCCCC----------
Q 012190 156 IIKPDGGPPRWFCPVDCG-RPLKGSPTLLFLPGIDGLGL--GLILHH-KPL-GKAFEVRCLHIPVYDRTP---------- 220 (468)
Q Consensus 156 ~~~~dg~~~~~~~y~~~g-~~~~~~p~lV~lHG~~~s~~--~~~~~~-~~L-~~~~~V~~~D~~G~G~Ss---------- 220 (468)
+...||.......+.+.+ .+..+.|+||++||.++... .|.... +.| .++|.|+++|+||+|.+.
T Consensus 454 ~~s~DG~~i~~~l~~P~~~~~~~~~P~vl~~HGG~~~~~~~~~~~~~~q~la~~Gy~Vv~~d~RGsg~~G~~~~~~~~~~ 533 (711)
T 4hvt_A 454 ATSFDGVKIPYFLVYKKGIKFDGKNPTLLEAYGGFQVINAPYFSRIKNEVWVKNAGVSVLANIRGGGEFGPEWHKSAQGI 533 (711)
T ss_dssp EECTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHTGGGTCEEEEECCTTSSTTCHHHHHTTSGG
T ss_pred EECCCCeEEEEEEEecCCCCCCCCccEEEEECCCCCCCCCCcccHHHHHHHHHCCCEEEEEeCCCCCCcchhHHHhhhhc
Confidence 445677653322233332 12235899999999865543 232222 244 789999999999998762
Q ss_pred -hHHHHHHHHHHHHHHhhcC--CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchh
Q 012190 221 -FEGLVKFVEETVRREHASS--PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDE 297 (468)
Q Consensus 221 -~~~~~~dl~~~i~~~~~~~--~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~ 297 (468)
.....+|+.+.++.+.... ...++.++|+|+||.+++.++.++|++++++|+.+|........ . ....
T Consensus 534 ~~~~~~~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd~f~a~V~~~pv~D~~~~~--------~-~~~~ 604 (711)
T 4hvt_A 534 KRQTAFNDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPELFGAVACEVPILDMIRYK--------E-FGAG 604 (711)
T ss_dssp GTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGG--------G-STTG
T ss_pred cCcCcHHHHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcCceEEEEEeCCccchhhhh--------c-cccc
Confidence 1233445555555554332 23689999999999999999999999999999998865431100 0 0000
Q ss_pred HHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhccc
Q 012190 298 LHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHA 377 (468)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ 377 (468)
..+... .+++ ..+ + ....+..... ...+.+
T Consensus 605 -----~~~~~~-~G~p-----------~~~---------------------------~----~~~~l~~~SP--~~~v~~ 634 (711)
T 4hvt_A 605 -----HSWVTE-YGDP-----------EIP---------------------------N----DLLHIKKYAP--LENLSL 634 (711)
T ss_dssp -----GGGHHH-HCCT-----------TSH---------------------------H----HHHHHHHHCG--GGSCCT
T ss_pred -----hHHHHH-hCCC-----------cCH---------------------------H----HHHHHHHcCH--HHHHhh
Confidence 000000 0111 000 0 0001111100 134456
Q ss_pred CCc--eEEEEEeCCCCCCCcHHHHHHHHHhC-C----CcEEEEeCCCCcccccc
Q 012190 378 VKA--EVLVLASGKDNMLPSEDEAKRLNNSL-Q----NCIVRNFKDNGHTLLLE 424 (468)
Q Consensus 378 i~~--PvLlI~G~~D~~v~~~~~~~~l~~~l-~----~~~~~~i~~aGH~~~~e 424 (468)
+++ |+|+++|++|..+|+. ++.++.+.+ . .+++++++++||.+...
T Consensus 635 i~~~pPvLii~G~~D~~Vp~~-~s~~~~~aL~~~~g~pv~l~~~p~~gHg~~~~ 687 (711)
T 4hvt_A 635 TQKYPTVLITDSVLDQRVHPW-HGRIFEYVLAQNPNTKTYFLESKDSGHGSGSD 687 (711)
T ss_dssp TSCCCEEEEEEETTCCSSCTH-HHHHHHHHHTTCTTCCEEEEEESSCCSSSCSS
T ss_pred cCCCCCEEEEecCCCCcCChH-HHHHHHHHHHHHcCCCEEEEEECCCCCcCcCC
Confidence 676 9999999999999999 788888877 3 57999999999997543
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A | Back alignment and structure |
|---|
Probab=99.55 E-value=2.3e-14 Score=143.51 Aligned_cols=99 Identities=12% Similarity=0.007 Sum_probs=67.8
Q ss_pred CCCeEEEeCCCCCchhh-----------HHHhHhhh-cCCeEEEEecCCCCCCCC---------------hHHHHHHHHH
Q 012190 178 GSPTLLFLPGIDGLGLG-----------LILHHKPL-GKAFEVRCLHIPVYDRTP---------------FEGLVKFVEE 230 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~-----------~~~~~~~L-~~~~~V~~~D~~G~G~Ss---------------~~~~~~dl~~ 230 (468)
+.|+||++||++++... |..++..| .++|.|+++|+||||.|+ +.+.++++..
T Consensus 78 ~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~~~~~~~~~~~~~~~d~~~~~~~ 157 (397)
T 3h2g_A 78 PYPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLASQGYVVVGSDYLGLGKSNYAYHPYLHSASEASATIDAMRAARS 157 (397)
T ss_dssp CEEEEEEECCCCCBTTCCHHHHHHHTTTCSHHHHTTGGGTCEEEEECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCcCCCCcccccccccccchHHHHHHHHHCCCEEEEecCCCCCCCCCCccchhhhhhHHHHHHHHHHHHHH
Confidence 46789999999998654 45567777 778999999999999883 2233333344
Q ss_pred HHHHHhhcCCCCcEEEEEeChhHHHHHHHHHh-CC----C-CceEEEEeCCCC
Q 012190 231 TVRREHASSPEKPIYLVGDSFGGCLALAVAAR-NP----T-IDLILILSNPAT 277 (468)
Q Consensus 231 ~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~-~P----~-~v~~lVli~p~~ 277 (468)
+++.+... ...+++|+||||||.+++.+|.. .+ + .+.+++..+++.
T Consensus 158 ~~~~~~~~-~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~ 209 (397)
T 3h2g_A 158 VLQHLKTP-LSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLVASAPISGPY 209 (397)
T ss_dssp HHHHHTCC-EEEEEEEEEETHHHHHHHHHHHHHHHHCTTTSEEEEEEEESCCS
T ss_pred HHHhcCCC-CCCcEEEEEECHHHHHHHHHHHHhhhhcCcCcceEEEecccccc
Confidence 44443211 12589999999999999887732 22 1 466666666544
|
| >2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=8.4e-15 Score=147.28 Aligned_cols=100 Identities=15% Similarity=0.202 Sum_probs=80.7
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhh-cCCe---EEEEecCCCCCCC----------------------------------
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAF---EVRCLHIPVYDRT---------------------------------- 219 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~---~V~~~D~~G~G~S---------------------------------- 219 (468)
++++|||+||++++...|..+++.| ..+| +|+++|+||||.|
T Consensus 21 ~~ppVVLlHG~g~s~~~w~~la~~La~~Gy~~~~Via~DlpG~G~S~~~~~Dv~~~G~~~~~G~n~~p~id~~~l~~v~~ 100 (484)
T 2zyr_A 21 DFRPVVFVHGLAGSAGQFESQGMRFAANGYPAEYVKTFEYDTISWALVVETDMLFSGLGSEFGLNISQIIDPETLDKILS 100 (484)
T ss_dssp CCCCEEEECCTTCCGGGGHHHHHHHHHTTCCGGGEEEECCCHHHHHHHTTTSTTTTTGGGHHHHHHGGGSCHHHHHHHHT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHcCCCcceEEEEECCCCCcccccccccccccccccccccccccccccccccccc
Confidence 4678999999999999999999999 5578 7999999999965
Q ss_pred -----ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCC---CCceEEEEeCCCC
Q 012190 220 -----PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNP---TIDLILILSNPAT 277 (468)
Q Consensus 220 -----s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P---~~v~~lVli~p~~ 277 (468)
+.....+++.+.++.+....+.++++|+||||||.+++.++.++| ++|+++|+++++.
T Consensus 101 ~~~~~~~~~~~~dla~~L~~ll~~lg~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~ 166 (484)
T 2zyr_A 101 KSRERLIDETFSRLDRVIDEALAESGADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGVW 166 (484)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCCC
T ss_pred ccccCchhhhHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCcc
Confidence 122334444444444444345579999999999999999999998 4899999999865
|
| >1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=1.1e-13 Score=130.48 Aligned_cols=101 Identities=15% Similarity=0.120 Sum_probs=73.2
Q ss_pred CCCCeEEEeCCCCCchhhHHHh-------Hhhh-c----CCeEEEEecCCCCCCCC---hHHH----HHHHHHHHHHHhh
Q 012190 177 KGSPTLLFLPGIDGLGLGLILH-------HKPL-G----KAFEVRCLHIPVYDRTP---FEGL----VKFVEETVRREHA 237 (468)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~~~~-------~~~L-~----~~~~V~~~D~~G~G~Ss---~~~~----~~dl~~~i~~~~~ 237 (468)
...|+||++||.+++...|... ++.| . .+|.|+++|.++++.+. +.++ ++++..+++....
T Consensus 60 ~~~P~vv~lHG~g~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~vv~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 139 (268)
T 1jjf_A 60 KKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAAGPGIADGYENFTKDLLNSLIPYIESNYS 139 (268)
T ss_dssp SCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCCCCTTCSCHHHHHHHHHHHTHHHHHHHHSC
T ss_pred CCccEEEEECCCCCCcchhhhccccHHHHHHHHHHcCCCCCEEEEEeCCCCCCccccccHHHHHHHHHHHHHHHHHhhcC
Confidence 3578999999999887665443 5555 3 35999999999987552 2232 3344444443211
Q ss_pred c-CCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 238 S-SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 238 ~-~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
. ....+++|+||||||.+|+.++.++|+.++++++++|..
T Consensus 140 ~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~ 180 (268)
T 1jjf_A 140 VYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAP 180 (268)
T ss_dssp BCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCT
T ss_pred CCCCCCceEEEEECHHHHHHHHHHHhCchhhhheEEeCCCC
Confidence 1 123689999999999999999999999999999999854
|
| >4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=99.52 E-value=5.9e-14 Score=133.31 Aligned_cols=99 Identities=15% Similarity=0.169 Sum_probs=75.0
Q ss_pred CCCeEEEeCCCCCchhhHHH---hHhhh-cCCeEEEEecCC--------------CCCCC--------------C-hHHH
Q 012190 178 GSPTLLFLPGIDGLGLGLIL---HHKPL-GKAFEVRCLHIP--------------VYDRT--------------P-FEGL 224 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~---~~~~L-~~~~~V~~~D~~--------------G~G~S--------------s-~~~~ 224 (468)
..|+||++||++++...|.. +...+ ..++.|+++|.+ |+|.+ . .+.+
T Consensus 50 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~rg~~~~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~ 129 (283)
T 4b6g_A 50 PLGVIYWLSGLTCTEQNFITKSGFQRYAAEHQVIVVAPDTSPRGEQVPNDDAYDLGQSAGFYLNATEQPWAANYQMYDYI 129 (283)
T ss_dssp CEEEEEEECCTTCCSHHHHHHSCTHHHHHHHTCEEEEECSSCCSTTSCCCSSTTSBTTBCTTSBCCSTTGGGTCBHHHHH
T ss_pred CCCEEEEEcCCCCCccchhhcccHHHHHhhCCeEEEEeccccccccccccccccccCCCcccccCccCcccchhhHHHHH
Confidence 47899999999999888754 23334 457999999976 33433 1 2333
Q ss_pred HHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCC
Q 012190 225 VKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (468)
Q Consensus 225 ~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~ 278 (468)
++++..+++..... ..+++|+||||||.+|+.+|.++|+.++++++++|...
T Consensus 130 ~~~~~~~i~~~~~~--~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~ 181 (283)
T 4b6g_A 130 LNELPRLIEKHFPT--NGKRSIMGHSMGGHGALVLALRNQERYQSVSAFSPILS 181 (283)
T ss_dssp HTHHHHHHHHHSCE--EEEEEEEEETHHHHHHHHHHHHHGGGCSCEEEESCCCC
T ss_pred HHHHHHHHHHhCCC--CCCeEEEEEChhHHHHHHHHHhCCccceeEEEECCccc
Confidence 56677777764321 35899999999999999999999999999999998654
|
| >1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.52 E-value=3e-13 Score=145.80 Aligned_cols=213 Identities=12% Similarity=0.095 Sum_probs=118.4
Q ss_pred hhh-cCCeEEEEecCCCCCCCC------hHHHHHHHHHHHHHHhhc----------------CCCCcEEEEEeChhHHHH
Q 012190 200 KPL-GKAFEVRCLHIPVYDRTP------FEGLVKFVEETVRREHAS----------------SPEKPIYLVGDSFGGCLA 256 (468)
Q Consensus 200 ~~L-~~~~~V~~~D~~G~G~Ss------~~~~~~dl~~~i~~~~~~----------------~~~~~i~LvGhS~GG~ia 256 (468)
..| ++||.|+++|+||+|.|+ ..+.++|+.++++.+... ....+|.++||||||.++
T Consensus 275 ~~la~~GYaVv~~D~RG~G~S~G~~~~~~~~e~~D~~a~IdwL~~~~~~~~d~~~~~~v~q~~~~grVgl~G~SyGG~ia 354 (763)
T 1lns_A 275 DYFLTRGFASIYVAGVGTRSSDGFQTSGDYQQIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLGTMA 354 (763)
T ss_dssp HHHHTTTCEEEEECCTTSTTSCSCCCTTSHHHHHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHHHHHH
T ss_pred HHHHHCCCEEEEECCCcCCCCCCcCCCCCHHHHHHHHHHHHHHhhcccccccccccccccccCCCCcEEEEEECHHHHHH
Confidence 455 778999999999999984 236778899999987631 113589999999999999
Q ss_pred HHHHHhCCCCceEEEEeCCCCCCCCCCcCcc--hHHHhhCchh-HHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhh
Q 012190 257 LAVAARNPTIDLILILSNPATSFGRSQLQPL--FPILKAMPDE-LHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQ 333 (468)
Q Consensus 257 ~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (468)
+.+|+++|+.++++|+.++....... +... .......+.. ........+.... .+-.... . ......
T Consensus 355 l~~Aa~~p~~lkaiV~~~~~~d~~~~-~~~~g~~~~~~g~~~~~~~~l~~~~~~~~~-~~g~~~~--~------~~~~~~ 424 (763)
T 1lns_A 355 YGAATTGVEGLELILAEAGISSWYNY-YRENGLVRSPGGFPGEDLDVLAALTYSRNL-DGADFLK--G------NAEYEK 424 (763)
T ss_dssp HHHHTTTCTTEEEEEEESCCSBHHHH-HBSSSSBCCCTTCTTCCHHHHHHHHCGGGG-SHHHHHH--H------HHHHHH
T ss_pred HHHHHhCCcccEEEEEecccccHHHH-hhhcchhhhcccCCchhhhHHhHHHHhhhc-Ccchhhh--H------HHHHHH
Confidence 99999999999999999886521100 0000 0000000000 0000000000000 0000000 0 000000
Q ss_pred hhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCC--cEE
Q 012190 334 LSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQN--CIV 411 (468)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~--~~~ 411 (468)
....+. .......+...-.| ... .....+.+|++|+|+++|.+|..+++. .+..+++.+++ ...
T Consensus 425 ~~~~~~------~~~~~~~~~~~~~w-----~~~--s~~~~l~~I~~PvLii~G~~D~~vp~~-~a~~l~~al~~~~~~~ 490 (763)
T 1lns_A 425 RLAEMT------AALDRKSGDYNQFW-----HDR--NYLINTDKVKADVLIVHGLQDWNVTPE-QAYNFWKALPEGHAKH 490 (763)
T ss_dssp HHHHHH------HHHCTTTCCCCHHH-----HTT--BGGGGGGGCCSEEEEEEETTCCSSCTH-HHHHHHHHSCTTCCEE
T ss_pred HHHHHH------hhhhhccCchhHHh-----hcc--ChhhHhhcCCCCEEEEEECCCCCCChH-HHHHHHHhhccCCCeE
Confidence 000000 00000000000001 000 113466889999999999999999999 79999999974 334
Q ss_pred EEeCCCCcccccc-CcHHHHHHHHhc
Q 012190 412 RNFKDNGHTLLLE-EGISLLTIIKGT 436 (468)
Q Consensus 412 ~~i~~aGH~~~~e-~p~~~~~~I~~~ 436 (468)
.++.++||..+.+ .+..+.+.+.+|
T Consensus 491 l~i~~~gH~~~~~~~~~~~~~~i~~F 516 (763)
T 1lns_A 491 AFLHRGAHIYMNSWQSIDFSETINAY 516 (763)
T ss_dssp EEEESCSSCCCTTBSSCCHHHHHHHH
T ss_pred EEEeCCcccCccccchHHHHHHHHHH
Confidence 4556789998665 555566666643
|
| >1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus} | Back alignment and structure |
|---|
Probab=99.49 E-value=3.9e-14 Score=143.58 Aligned_cols=100 Identities=11% Similarity=0.014 Sum_probs=85.3
Q ss_pred CCCeEEEeCCCCCch-hhHHH-hHhhhcC--CeEEEEecCCCCCCCC-------hHHHHHHHHHHHHHHhhc--CCCCcE
Q 012190 178 GSPTLLFLPGIDGLG-LGLIL-HHKPLGK--AFEVRCLHIPVYDRTP-------FEGLVKFVEETVRREHAS--SPEKPI 244 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~-~~~~~-~~~~L~~--~~~V~~~D~~G~G~Ss-------~~~~~~dl~~~i~~~~~~--~~~~~i 244 (468)
++|++|++||++++. ..|.. +++.|.+ +|+|+++|+||||.|+ ++++++++.++++.+... .+.+++
T Consensus 69 ~~p~vvliHG~~~~~~~~w~~~~~~~l~~~~~~~Vi~~D~~g~G~S~~~~~~~~~~~~~~dl~~~i~~L~~~~g~~~~~i 148 (452)
T 1w52_X 69 SRKTHFVIHGFRDRGEDSWPSDMCKKILQVETTNCISVDWSSGAKAEYTQAVQNIRIVGAETAYLIQQLLTELSYNPENV 148 (452)
T ss_dssp TSCEEEEECCTTCCSSSSHHHHHHHHHHTTSCCEEEEEECHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGGE
T ss_pred CCCEEEEEcCCCCCCCchHHHHHHHHHHhhCCCEEEEEecccccccccHHHHHhHHHHHHHHHHHHHHHHHhcCCCcccE
Confidence 478999999999998 67887 6777743 8999999999999985 456678888888887432 235689
Q ss_pred EEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 245 YLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 245 ~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
+|+||||||.+|..+|.++|+++.++|+++|+.
T Consensus 149 ~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1w52_X 149 HIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPAE 181 (452)
T ss_dssp EEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred EEEEeCHHHHHHHHHHHhcccceeeEEeccccc
Confidence 999999999999999999999999999999865
|
| >1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=5.7e-14 Score=142.36 Aligned_cols=100 Identities=17% Similarity=0.117 Sum_probs=85.3
Q ss_pred CCCeEEEeCCCCCch-hhHHH-hHhhhcC--CeEEEEecCCCCCCCC-------hHHHHHHHHHHHHHHhhc--CCCCcE
Q 012190 178 GSPTLLFLPGIDGLG-LGLIL-HHKPLGK--AFEVRCLHIPVYDRTP-------FEGLVKFVEETVRREHAS--SPEKPI 244 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~-~~~~~-~~~~L~~--~~~V~~~D~~G~G~Ss-------~~~~~~dl~~~i~~~~~~--~~~~~i 244 (468)
++|++|++||++++. ..|.. +++.|.+ +|+|+++|+||||.|+ ++++++++.++++.+... .+.+++
T Consensus 69 ~~p~vvliHG~~~~~~~~w~~~l~~~l~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~li~~L~~~~g~~~~~i 148 (452)
T 1bu8_A 69 DRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRGSRTEYTQASYNTRVVGAEIAFLVQVLSTEMGYSPENV 148 (452)
T ss_dssp TSEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGGE
T ss_pred CCCeEEEECCCCCCCCchHHHHHHHHHHhhCCCEEEEEechhcccCchhHhHhhHHHHHHHHHHHHHHHHHhcCCCccce
Confidence 478999999999998 78888 6677743 8999999999999985 456778888888887432 234689
Q ss_pred EEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 245 YLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 245 ~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
+|+||||||.+|+.+|.++|++|.++|+++|+.
T Consensus 149 ~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1bu8_A 149 HLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAE 181 (452)
T ss_dssp EEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred EEEEEChhHHHHHHHHHhcccccceEEEecCCc
Confidence 999999999999999999999999999999865
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 | Back alignment and structure |
|---|
Probab=99.46 E-value=8.7e-14 Score=132.81 Aligned_cols=96 Identities=21% Similarity=0.177 Sum_probs=84.0
Q ss_pred CCCeEEEeCCCCCchh-----hHHHhHhhh-cCCeEEEEecCCCCCCC--ChHHHHHHHHHHHHHHhhcCCCCcEEEEEe
Q 012190 178 GSPTLLFLPGIDGLGL-----GLILHHKPL-GKAFEVRCLHIPVYDRT--PFEGLVKFVEETVRREHASSPEKPIYLVGD 249 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~-----~~~~~~~~L-~~~~~V~~~D~~G~G~S--s~~~~~~dl~~~i~~~~~~~~~~~i~LvGh 249 (468)
++|+|||+||++++.. .|..+.+.| ..+|+|+++|+||+|.+ +.+++++++.++++.+ +.++++|+||
T Consensus 6 ~~~~vvlvHG~~~~~~~~~~~~~~~~~~~L~~~G~~v~~~d~~g~g~s~~~~~~~~~~i~~~~~~~----~~~~v~lvGh 81 (285)
T 1ex9_A 6 TKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSEVRGEQLLQQVEEIVALS----GQPKVNLIGH 81 (285)
T ss_dssp CSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCHHHHHHHHHHHHHHHHHHH----CCSCEEEEEE
T ss_pred CCCeEEEeCCCCCCccccccccHHHHHHHHHhCCCEEEEEeCCCCCCchhhHHHHHHHHHHHHHHh----CCCCEEEEEE
Confidence 4778999999998854 888889999 56799999999999988 4678888888888874 3458999999
Q ss_pred ChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 250 SFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 250 S~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
||||.++..++.++|++|+++|+++++.
T Consensus 82 S~GG~~a~~~a~~~p~~v~~lv~i~~p~ 109 (285)
T 1ex9_A 82 SHGGPTIRYVAAVRPDLIASATSVGAPH 109 (285)
T ss_dssp TTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred CHhHHHHHHHHHhChhheeEEEEECCCC
Confidence 9999999999999999999999999843
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E | Back alignment and structure |
|---|
Probab=99.46 E-value=1e-13 Score=134.32 Aligned_cols=96 Identities=18% Similarity=0.206 Sum_probs=84.5
Q ss_pred CCCeEEEeCCCCCch------hhHHHhHhhh-cCCeEEEEecCCCCCCCC-----hHHHHHHHHHHHHHHhhcCCCCcEE
Q 012190 178 GSPTLLFLPGIDGLG------LGLILHHKPL-GKAFEVRCLHIPVYDRTP-----FEGLVKFVEETVRREHASSPEKPIY 245 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~------~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss-----~~~~~~dl~~~i~~~~~~~~~~~i~ 245 (468)
++|+|||+||++++. ..|..+.+.| .++|+|+++|+||+|.++ .+++++++.++++.+ ..++++
T Consensus 7 ~~~~vVlvHG~~~~~~~~~~~~~w~~l~~~L~~~G~~V~~~d~~g~g~s~~~~~~~~~l~~~i~~~l~~~----~~~~v~ 82 (320)
T 1ys1_X 7 TRYPIILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQSDDGPNGRGEQLLAYVKTVLAAT----GATKVN 82 (320)
T ss_dssp CSSCEEEECCTTCCSEETTTEESSTTHHHHHHHTTCCEEECCCCSSCCSSSTTSHHHHHHHHHHHHHHHH----CCSCEE
T ss_pred CCCEEEEECCCCCCccccchHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCCCEE
Confidence 477899999999988 7888899999 567999999999999883 678888888888874 345899
Q ss_pred EEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 246 LVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 246 LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
|+||||||.++..++.++|++|+++|+++++.
T Consensus 83 lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p~ 114 (320)
T 1ys1_X 83 LVGHSQGGLTSRYVAAVAPDLVASVTTIGTPH 114 (320)
T ss_dssp EEEETHHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred EEEECHhHHHHHHHHHhChhhceEEEEECCCC
Confidence 99999999999999999999999999999753
|
| >1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19 | Back alignment and structure |
|---|
Probab=99.45 E-value=1.2e-13 Score=139.40 Aligned_cols=100 Identities=17% Similarity=0.133 Sum_probs=83.3
Q ss_pred CCCeEEEeCCCCCch-hhHHH-hHhhh--cCCeEEEEecCCCCCCCC-------hHHHHHHHHHHHHHHhhc--CCCCcE
Q 012190 178 GSPTLLFLPGIDGLG-LGLIL-HHKPL--GKAFEVRCLHIPVYDRTP-------FEGLVKFVEETVRREHAS--SPEKPI 244 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~-~~~~~-~~~~L--~~~~~V~~~D~~G~G~Ss-------~~~~~~dl~~~i~~~~~~--~~~~~i 244 (468)
++|++|++||++++. ..|.. +++.| ..+|+|+++|+||||.|. .+.+++++.++++.+... .+.+++
T Consensus 68 ~~p~vvliHG~~~s~~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~~~~~~~~~v~~~la~ll~~L~~~~g~~~~~v 147 (449)
T 1hpl_A 68 GRKTRFIIHGFIDKGEESWLSTMCQNMFKVESVNCICVDWKSGSRTAYSQASQNVRIVGAEVAYLVGVLQSSFDYSPSNV 147 (449)
T ss_dssp TSEEEEEECCCCCTTCTTHHHHHHHHHHHHCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGGE
T ss_pred CCCeEEEEecCCCCCCccHHHHHHHHHHhcCCeEEEEEeCCcccCCccHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccE
Confidence 467899999999986 57876 66776 568999999999999986 344667888888877422 235689
Q ss_pred EEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 245 YLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 245 ~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
+|+||||||.+|..+|.++|+++.++++++|+.
T Consensus 148 ~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa~ 180 (449)
T 1hpl_A 148 HIIGHSLGSHAAGEAGRRTNGAVGRITGLDPAE 180 (449)
T ss_dssp EEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred EEEEECHhHHHHHHHHHhcchhcceeeccCccc
Confidence 999999999999999999999999999999865
|
| >1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A | Back alignment and structure |
|---|
Probab=99.44 E-value=1.3e-13 Score=139.30 Aligned_cols=101 Identities=15% Similarity=0.110 Sum_probs=85.7
Q ss_pred CCCeEEEeCCCCCch-hhHHH-hHhhhc--CCeEEEEecCCCCCCCC-------hHHHHHHHHHHHHHHhhc--CCCCcE
Q 012190 178 GSPTLLFLPGIDGLG-LGLIL-HHKPLG--KAFEVRCLHIPVYDRTP-------FEGLVKFVEETVRREHAS--SPEKPI 244 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~-~~~~~-~~~~L~--~~~~V~~~D~~G~G~Ss-------~~~~~~dl~~~i~~~~~~--~~~~~i 244 (468)
++|+||++||++++. ..|.. +.+.|. .+|+|+++|+||+|.|+ ++++++++.++++.+... .+.+++
T Consensus 69 ~~~~vvllHG~~~s~~~~w~~~~~~~l~~~~~~~Vi~~D~~g~g~s~~~~~~~~~~~~~~dl~~~i~~l~~~~g~~~~~i 148 (432)
T 1gpl_A 69 NRKTRFIIHGFTDSGENSWLSDMCKNMFQVEKVNCICVDWKGGSKAQYSQASQNIRVVGAEVAYLVQVLSTSLNYAPENV 148 (432)
T ss_dssp TSEEEEEECCTTCCTTSHHHHHHHHHHHHHCCEEEEEEECHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGGE
T ss_pred CCCeEEEECCCCCCCCchHHHHHHHHHHhcCCcEEEEEECccccCccchhhHhhHHHHHHHHHHHHHHHHHhcCCCcccE
Confidence 477999999999999 68887 778884 58999999999999985 455678888888887532 235699
Q ss_pred EEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCC
Q 012190 245 YLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (468)
Q Consensus 245 ~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~ 278 (468)
+|+||||||.+|+.+|.++|+++.++++++|+..
T Consensus 149 ~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~p 182 (432)
T 1gpl_A 149 HIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAEP 182 (432)
T ss_dssp EEEEETHHHHHHHHHHHTTTTCSSEEEEESCBCT
T ss_pred EEEEeCHHHHHHHHHHHhcccccceeEEeccccc
Confidence 9999999999999999999999999999998653
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 | Back alignment and structure |
|---|
Probab=99.42 E-value=1.9e-13 Score=114.32 Aligned_cols=85 Identities=19% Similarity=0.194 Sum_probs=70.6
Q ss_pred eeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCC-----hHHHHHHHHHHHHHHhhcCCC
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP-----FEGLVKFVEETVRREHASSPE 241 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss-----~~~~~~dl~~~i~~~~~~~~~ 241 (468)
++|...|+ +|+|||+| ++...|... |.++|+|+++|+||||.|+ ++++++++.++++.+ ..
T Consensus 14 ~~~~~~g~----~~~vv~~H---~~~~~~~~~---l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~----~~ 79 (131)
T 2dst_A 14 LVFDRVGK----GPPVLLVA---EEASRWPEA---LPEGYAFYLLDLPGYGRTEGPRMAPEELAHFVAGFAVMM----NL 79 (131)
T ss_dssp EEEEEECC----SSEEEEES---SSGGGCCSC---CCTTSEEEEECCTTSTTCCCCCCCHHHHHHHHHHHHHHT----TC
T ss_pred EEEEEcCC----CCeEEEEc---CCHHHHHHH---HhCCcEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHc----CC
Confidence 34555554 67899999 566667666 8777999999999999985 788999999999884 44
Q ss_pred CcEEEEEeChhHHHHHHHHHhCCC
Q 012190 242 KPIYLVGDSFGGCLALAVAARNPT 265 (468)
Q Consensus 242 ~~i~LvGhS~GG~ia~~~a~~~P~ 265 (468)
++++++||||||.+++.+|.++|.
T Consensus 80 ~~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 80 GAPWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp CSCEEEECGGGGGGHHHHHHTTCC
T ss_pred CccEEEEEChHHHHHHHHHhcCCc
Confidence 589999999999999999999985
|
| >2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A | Back alignment and structure |
|---|
Probab=99.40 E-value=2e-13 Score=132.88 Aligned_cols=101 Identities=12% Similarity=0.070 Sum_probs=80.9
Q ss_pred CCCeEEEeCCCCCc----------hhhH----HHhHhhh-cCCeE---EEEecCCCCCCCC-------hHHHHHHHHHHH
Q 012190 178 GSPTLLFLPGIDGL----------GLGL----ILHHKPL-GKAFE---VRCLHIPVYDRTP-------FEGLVKFVEETV 232 (468)
Q Consensus 178 ~~p~lV~lHG~~~s----------~~~~----~~~~~~L-~~~~~---V~~~D~~G~G~Ss-------~~~~~~dl~~~i 232 (468)
.+++|||+||++++ ...| ..+++.| ..+|. |+++|+||+|.|+ .+..++++.+.+
T Consensus 39 ~~~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~~~l~~~L~~~Gy~~~~V~~~D~~g~G~S~~~~~~~~~~~~~~~l~~~I 118 (342)
T 2x5x_A 39 TKTPVIFIHGNGDNAISFDMPPGNVSGYGTPARSVYAELKARGYNDCEIFGVTYLSSSEQGSAQYNYHSSTKYAIIKTFI 118 (342)
T ss_dssp CSCCEEEECCTTCCGGGGGCCCCCCTTTCCCSSCHHHHHHHTTCCTTSEEEECCSCHHHHTCGGGCCBCHHHHHHHHHHH
T ss_pred CCCeEEEECCcCCCcccccccccccccccccHHHHHHHHHhCCCCCCeEEEEeCCCCCccCCccccCCHHHHHHHHHHHH
Confidence 46679999999994 4578 8888888 55787 9999999999652 345555555555
Q ss_pred HHHhhcCCCCcEEEEEeChhHHHHHHHHHhC--CCCceEEEEeCCCCC
Q 012190 233 RREHASSPEKPIYLVGDSFGGCLALAVAARN--PTIDLILILSNPATS 278 (468)
Q Consensus 233 ~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~--P~~v~~lVli~p~~~ 278 (468)
+.+....+.++++||||||||.+++.++.++ |++|+++|+++++..
T Consensus 119 ~~l~~~~g~~~v~LVGHSmGG~iA~~~a~~~~~p~~V~~lVlla~p~~ 166 (342)
T 2x5x_A 119 DKVKAYTGKSQVDIVAHSMGVSMSLATLQYYNNWTSVRKFINLAGGIR 166 (342)
T ss_dssp HHHHHHHTCSCEEEEEETHHHHHHHHHHHHHTCGGGEEEEEEESCCTT
T ss_pred HHHHHHhCCCCEEEEEECHHHHHHHHHHHHcCchhhhcEEEEECCCcc
Confidence 5554444556999999999999999999998 999999999998763
|
| >1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A | Back alignment and structure |
|---|
Probab=99.40 E-value=4.6e-13 Score=135.15 Aligned_cols=100 Identities=17% Similarity=0.196 Sum_probs=82.2
Q ss_pred CCCeEEEeCCCCCchh-hHHH-hHhhh-c-CCeEEEEecCCCCCCCC-------hHHHHHHHHHHHHHHhhc--CCCCcE
Q 012190 178 GSPTLLFLPGIDGLGL-GLIL-HHKPL-G-KAFEVRCLHIPVYDRTP-------FEGLVKFVEETVRREHAS--SPEKPI 244 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~-~~~~-~~~~L-~-~~~~V~~~D~~G~G~Ss-------~~~~~~dl~~~i~~~~~~--~~~~~i 244 (468)
++|++|++||++++.. .|.. +.+.| . .+|+|+++|+||+|.+. ++.+++++.++++.+... .+.+++
T Consensus 69 ~~p~vvliHG~~~s~~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~~~~~~~~~~a~~l~~ll~~L~~~~g~~~~~v 148 (450)
T 1rp1_A 69 DKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKGSQTSYTQAANNVRVVGAQVAQMLSMLSANYSYSPSQV 148 (450)
T ss_dssp TSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGGE
T ss_pred CCCeEEEEccCCCCCCcchHHHHHHHHHhcCCeEEEEEeCccccCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCChhhE
Confidence 4789999999999876 7876 45665 4 37999999999999885 345678888888887421 235689
Q ss_pred EEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCC
Q 012190 245 YLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (468)
Q Consensus 245 ~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~ 278 (468)
+|+||||||.+|..+|.++|+ +.++++++|+..
T Consensus 149 ~LVGhSlGg~vA~~~a~~~p~-v~~iv~Ldpa~p 181 (450)
T 1rp1_A 149 QLIGHSLGAHVAGEAGSRTPG-LGRITGLDPVEA 181 (450)
T ss_dssp EEEEETHHHHHHHHHHHTSTT-CCEEEEESCCCT
T ss_pred EEEEECHhHHHHHHHHHhcCC-cccccccCcccc
Confidence 999999999999999999999 999999998763
|
| >4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.1e-11 Score=122.64 Aligned_cols=101 Identities=10% Similarity=-0.025 Sum_probs=65.8
Q ss_pred CCCeEEEeCCCCCchh---------hHHHhHhhh-cCCeEEEEecCCCCCCCC-----h---HHHHHHHHHHHHH---Hh
Q 012190 178 GSPTLLFLPGIDGLGL---------GLILHHKPL-GKAFEVRCLHIPVYDRTP-----F---EGLVKFVEETVRR---EH 236 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~---------~~~~~~~~L-~~~~~V~~~D~~G~G~Ss-----~---~~~~~dl~~~i~~---~~ 236 (468)
..|+|++.||.++... .+....... .++|.|+++|+||+|.|+ + .....++.+.++. +.
T Consensus 73 ~~PvV~~~HG~~~~~~~~ps~~~~~~~~~~~~lal~~Gy~Vv~~D~rG~G~s~~~~~~~~~~~~~~~~~~D~~~a~~~~~ 152 (377)
T 4ezi_A 73 QVGIISYQHGTRFERNDVPSRNNEKNYIYLAAYGNSAGYMTVMPDYLGLGDNELTLHPYVQAETLASSSIDMLFAAKELA 152 (377)
T ss_dssp CEEEEEEECCCCCSTTCSGGGCCGGGHHHHHHHTTTTCCEEEEECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCcCCcccCCCcCcccchHHHHHHHHhCCcEEEEeCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHHHh
Confidence 4689999999985322 122222233 789999999999999874 1 1112222222221 11
Q ss_pred hcC---CCCcEEEEEeChhHHHHHHHHHhCCC-----CceEEEEeCCCCC
Q 012190 237 ASS---PEKPIYLVGDSFGGCLALAVAARNPT-----IDLILILSNPATS 278 (468)
Q Consensus 237 ~~~---~~~~i~LvGhS~GG~ia~~~a~~~P~-----~v~~lVli~p~~~ 278 (468)
... ...+++++||||||.+++.+|..+|+ .+.+.+..+++..
T Consensus 153 ~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~l~l~g~~~~~~p~d 202 (377)
T 4ezi_A 153 NRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYPDLPVSAVAPGSAPYG 202 (377)
T ss_dssp HHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTSCCCEEEEESCCCC
T ss_pred hccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCCCCceEEEEecCcccC
Confidence 111 23689999999999999999987653 5788888887653
|
| >3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.35 E-value=3.8e-12 Score=128.08 Aligned_cols=99 Identities=15% Similarity=0.198 Sum_probs=79.5
Q ss_pred CCeEEEeCCCCCchhhHH---HhHhhhcC--CeEEEEecCCCCCCCC-----------------hHHHHHHHHHHHHHHh
Q 012190 179 SPTLLFLPGIDGLGLGLI---LHHKPLGK--AFEVRCLHIPVYDRTP-----------------FEGLVKFVEETVRREH 236 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~---~~~~~L~~--~~~V~~~D~~G~G~Ss-----------------~~~~~~dl~~~i~~~~ 236 (468)
+.||||+||..++...+. .....|++ ++.|+++|+||||+|. .++.++|+..++++++
T Consensus 38 g~Pi~l~~Ggeg~~~~~~~~~g~~~~lA~~~~~~Vi~~DhRg~G~S~p~~~~~~~~~~~l~~lt~~q~~~Dl~~~~~~l~ 117 (446)
T 3n2z_B 38 GGSILFYTGNEGDIIWFCNNTGFMWDVAEELKAMLVFAEHRYYGESLPFGDNSFKDSRHLNFLTSEQALADFAELIKHLK 117 (446)
T ss_dssp TCEEEEEECCSSCHHHHHHHCHHHHHHHHHHTEEEEEECCTTSTTCCTTGGGGGSCTTTSTTCSHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCcchhhhhcccHHHHHHHHhCCcEEEEecCCCCCCCCCCccccccchhhccCCHHHHHHHHHHHHHHHH
Confidence 346888899888876432 22334432 4799999999999982 4678999999999988
Q ss_pred hcC---CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 237 ASS---PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 237 ~~~---~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
... +..|++++||||||.+|+.++.++|+.|.++|+.+++.
T Consensus 118 ~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~~v~g~i~ssapv 161 (446)
T 3n2z_B 118 RTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPI 161 (446)
T ss_dssp HHSTTGGGCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCT
T ss_pred HhcccCCCCCEEEEEeCHHHHHHHHHHHhhhccccEEEEeccch
Confidence 753 45689999999999999999999999999999987654
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.32 E-value=1.3e-10 Score=112.28 Aligned_cols=95 Identities=18% Similarity=0.284 Sum_probs=76.6
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCC-CChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHH
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDR-TPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLA 256 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~-Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia 256 (468)
++++++|+||++++...|..+.+.|. +.|+++|+|+... .+++++++++.+.++.. .+..+++|+||||||.+|
T Consensus 45 ~~~~l~~~hg~~g~~~~~~~~~~~l~--~~v~~~~~~~~~~~~~~~~~a~~~~~~i~~~---~~~~~~~l~G~S~Gg~va 119 (316)
T 2px6_A 45 SERPLFLVHPIEGSTTVFHSLASRLS--IPTYGLQCTRAAPLDSIHSLAAYYIDCIRQV---QPEGPYRVAGYSYGACVA 119 (316)
T ss_dssp SSCCEEEECCTTCCSGGGHHHHHHCS--SCEEEECCCTTSCTTCHHHHHHHHHHHHTTT---CSSCCCEEEEETHHHHHH
T ss_pred CCCeEEEECCCCCCHHHHHHHHHhcC--CCEEEEECCCCCCcCCHHHHHHHHHHHHHHh---CCCCCEEEEEECHHHHHH
Confidence 36789999999999999999999996 9999999995322 26888888888777653 224689999999999999
Q ss_pred HHHHHhCC---CC---ceEEEEeCCCC
Q 012190 257 LAVAARNP---TI---DLILILSNPAT 277 (468)
Q Consensus 257 ~~~a~~~P---~~---v~~lVli~p~~ 277 (468)
+.+|.+.+ +. +.+++++++..
T Consensus 120 ~~~a~~l~~~g~~~p~v~~l~li~~~~ 146 (316)
T 2px6_A 120 FEMCSQLQAQQSPAPTHNSLFLFDGSP 146 (316)
T ss_dssp HHHHHHHHHHC---CCCCEEEEESCSS
T ss_pred HHHHHHHHHcCCcccccceEEEEcCCc
Confidence 99998763 45 89999988753
|
| >3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A | Back alignment and structure |
|---|
Probab=99.31 E-value=8.7e-12 Score=130.84 Aligned_cols=123 Identities=11% Similarity=-0.068 Sum_probs=91.8
Q ss_pred CccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHh---H-hhh-cCCeEEEEecCCCCCCCC-----hHHH
Q 012190 155 EIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILH---H-KPL-GKAFEVRCLHIPVYDRTP-----FEGL 224 (468)
Q Consensus 155 ~~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~---~-~~L-~~~~~V~~~D~~G~G~Ss-----~~~~ 224 (468)
.+...||..+....|.+.+. ...|+||+.||++.....+... . ..| .+||.|+++|+||+|.|. +...
T Consensus 13 ~i~~~DG~~L~~~~~~P~~~--~~~P~vv~~~~~g~~~~~~~~y~~~~~~~la~~Gy~vv~~D~RG~G~S~g~~~~~~~~ 90 (587)
T 3i2k_A 13 MVPMRDGVRLAVDLYRPDAD--GPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGEFVPHVDD 90 (587)
T ss_dssp EEECTTSCEEEEEEEEECCS--SCEEEEEEEESSCTTCHHHHHTTTCCTHHHHHTTCEEEEEECTTSTTCCSCCCTTTTH
T ss_pred EEECCCCCEEEEEEEECCCC--CCeeEEEEECCcCCCccccccchhhHHHHHHHCCCEEEEEcCCCCCCCCCccccccch
Confidence 35567876654433443332 2368899999998876544332 3 556 789999999999999983 4567
Q ss_pred HHHHHHHHHHHhhc-CCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCC-CCC
Q 012190 225 VKFVEETVRREHAS-SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPA-TSF 279 (468)
Q Consensus 225 ~~dl~~~i~~~~~~-~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~-~~~ 279 (468)
++|+.++++.+... ....+|.++||||||.+++.+|+++|+.++++|++++. ...
T Consensus 91 ~~D~~~~i~~l~~~~~~~~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~~~d~ 147 (587)
T 3i2k_A 91 EADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADLY 147 (587)
T ss_dssp HHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCTC
T ss_pred hHHHHHHHHHHHhCCCCCCeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCccccc
Confidence 78888888877643 12358999999999999999999999999999999987 543
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.31 E-value=1e-11 Score=131.16 Aligned_cols=123 Identities=11% Similarity=0.038 Sum_probs=90.2
Q ss_pred CccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCch-------hhHHH-hH---hhh-cCCeEEEEecCCCCCCCC--
Q 012190 155 EIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLG-------LGLIL-HH---KPL-GKAFEVRCLHIPVYDRTP-- 220 (468)
Q Consensus 155 ~~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~-------~~~~~-~~---~~L-~~~~~V~~~D~~G~G~Ss-- 220 (468)
.+...||..+....+.+.+. ...|+||++||++... ..|.. +. +.| ++||.|+++|+||+|.|.
T Consensus 29 ~i~~~DG~~L~~~~~~P~~~--~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~~Gy~Vv~~D~RG~g~S~g~ 106 (615)
T 1mpx_A 29 MIPMRDGVKLHTVIVLPKGA--KNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEGD 106 (615)
T ss_dssp EEECTTSCEEEEEEEEETTC--CSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCSC
T ss_pred EEECCCCCEEEEEEEeCCCC--CCeeEEEEEcCCCCccccccccccccccccchhHHHHHhCCeEEEEECCCCCCCCCCc
Confidence 34566776544333444332 2357889999988764 12332 22 556 779999999999999883
Q ss_pred ---h-------H----HHHHHHHHHHHHHhhc--CCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCC
Q 012190 221 ---F-------E----GLVKFVEETVRREHAS--SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSF 279 (468)
Q Consensus 221 ---~-------~----~~~~dl~~~i~~~~~~--~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~ 279 (468)
. . ..++|+.++++.+... ....+|.++||||||.+++.+|..+|+.++++|++++....
T Consensus 107 ~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~~rv~l~G~S~GG~~al~~a~~~~~~l~a~v~~~~~~d~ 181 (615)
T 1mpx_A 107 YVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMIDG 181 (615)
T ss_dssp CCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESCCCCT
T ss_pred cccccccccccccccccHHHHHHHHHHHHHhcCCCCCCeEEEEecCHHHHHHHHHhhcCCCceEEEEecCCcccc
Confidence 2 2 6678888888887654 23358999999999999999999999999999999987763
|
| >1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.24 E-value=8.1e-11 Score=113.16 Aligned_cols=100 Identities=15% Similarity=0.057 Sum_probs=74.8
Q ss_pred CCCeEEEeCCC--CCchhhHHHh---Hhhh-cCCeEEEEecCCCCC----------------CCChHHH-HHHHHHHHHH
Q 012190 178 GSPTLLFLPGI--DGLGLGLILH---HKPL-GKAFEVRCLHIPVYD----------------RTPFEGL-VKFVEETVRR 234 (468)
Q Consensus 178 ~~p~lV~lHG~--~~s~~~~~~~---~~~L-~~~~~V~~~D~~G~G----------------~Ss~~~~-~~dl~~~i~~ 234 (468)
..|+||++||. +++...|... .+.+ ..++.|+++|.++.. ..+++++ ++++..+++.
T Consensus 33 ~~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~ 112 (304)
T 1sfr_A 33 NSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFYSDWYQPACGKAGCQTYKWETFLTSELPGWLQA 112 (304)
T ss_dssp TBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTCTTCBCSSCEEETTEEECCBHHHHHHTHHHHHHHH
T ss_pred CCCEEEEeCCCCCCCCcchhhcCCCHHHHHhcCCeEEEEECCCCCccccccCCccccccccccccHHHHHHHHHHHHHHH
Confidence 47899999999 5677777764 2445 457999999987641 1134444 3677777776
Q ss_pred HhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCC
Q 012190 235 EHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (468)
Q Consensus 235 ~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~ 278 (468)
... ....+++|+||||||.+|+.+|.++|+++.+++++++...
T Consensus 113 ~~~-~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~ 155 (304)
T 1sfr_A 113 NRH-VKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLD 155 (304)
T ss_dssp HHC-BCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSC
T ss_pred HCC-CCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccC
Confidence 321 2234899999999999999999999999999999998654
|
| >1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.23 E-value=5.9e-11 Score=112.73 Aligned_cols=99 Identities=17% Similarity=0.060 Sum_probs=73.1
Q ss_pred CCeEEEeCCCC--CchhhHHH---hHhhh-cCCeEEEEecCCCCC-CC--------Ch-HHHHHHHHHHHHHHhhcCCCC
Q 012190 179 SPTLLFLPGID--GLGLGLIL---HHKPL-GKAFEVRCLHIPVYD-RT--------PF-EGLVKFVEETVRREHASSPEK 242 (468)
Q Consensus 179 ~p~lV~lHG~~--~s~~~~~~---~~~~L-~~~~~V~~~D~~G~G-~S--------s~-~~~~~dl~~~i~~~~~~~~~~ 242 (468)
.|+|||+||++ ++...|.. +.+.+ ..++.|+++|.++.+ .+ .+ +.+++++..+++.... ...+
T Consensus 34 ~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~pd~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~-~~~~ 112 (280)
T 1r88_A 34 PHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMYTNWEQDGSKQWDTFLSAELPDWLAANRG-LAPG 112 (280)
T ss_dssp SSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTTSTTSBCSSCTTCBHHHHHHTHHHHHHHHHSC-CCSS
T ss_pred CCEEEEECCCCCCCChhhhhhcccHHHHHhcCCeEEEEECCCCCCccCCCCCCCCCcHHHHHHHHHHHHHHHHCC-CCCC
Confidence 37999999994 46667765 33445 457999999997642 11 23 3345677777776211 1235
Q ss_pred cEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCC
Q 012190 243 PIYLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (468)
Q Consensus 243 ~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~ 278 (468)
+++|+||||||.+|+.+|.++|+++.+++++++...
T Consensus 113 ~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~ 148 (280)
T 1r88_A 113 GHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLY 148 (280)
T ss_dssp CEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCC
T ss_pred ceEEEEECHHHHHHHHHHHhCccceeEEEEECCccC
Confidence 899999999999999999999999999999998653
|
| >1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=3.7e-11 Score=113.98 Aligned_cols=99 Identities=14% Similarity=0.011 Sum_probs=73.5
Q ss_pred CeEEEeCCCC--CchhhHHHhH---hhh-cCCeEEEEecCCCCC-C---------------CChHHH-HHHHHHHHHHHh
Q 012190 180 PTLLFLPGID--GLGLGLILHH---KPL-GKAFEVRCLHIPVYD-R---------------TPFEGL-VKFVEETVRREH 236 (468)
Q Consensus 180 p~lV~lHG~~--~s~~~~~~~~---~~L-~~~~~V~~~D~~G~G-~---------------Ss~~~~-~~dl~~~i~~~~ 236 (468)
++||++||++ ++...|.... +.+ ..++.|+++|.+|.+ . .+++++ ++++..+++...
T Consensus 30 ~~v~llHG~~~~~~~~~w~~~~~~~~~l~~~~~~vv~pd~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~ 109 (280)
T 1dqz_A 30 HAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSSFYTDWYQPSQSNGQNYTYKWETFLTREMPAWLQANK 109 (280)
T ss_dssp SEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTTCTTSBCSSSCTTTTCCSCCBHHHHHHTHHHHHHHHHH
T ss_pred CEEEEECCCCCCCCcccccccCcHHHHHhcCCeEEEEECCCCCccccCCCCCCccccccccccHHHHHHHHHHHHHHHHc
Confidence 5899999995 4777777643 445 457999999987542 1 123443 477777777622
Q ss_pred hcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCC
Q 012190 237 ASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSF 279 (468)
Q Consensus 237 ~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~ 279 (468)
. ...++++|+||||||.+|+.+|.++|+++.+++++++....
T Consensus 110 ~-~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~ 151 (280)
T 1dqz_A 110 G-VSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNP 151 (280)
T ss_dssp C-CCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCT
T ss_pred C-CCCCceEEEEECHHHHHHHHHHHhCCchheEEEEecCcccc
Confidence 1 22348999999999999999999999999999999987643
|
| >2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus} | Back alignment and structure |
|---|
Probab=99.23 E-value=1e-12 Score=131.57 Aligned_cols=98 Identities=10% Similarity=0.075 Sum_probs=70.6
Q ss_pred CCCeEEEeCCCCCc--------hhhHH----HhHhhh-cCCeEEEEecCCCCCCCChHHHHHHHHHHHHH----------
Q 012190 178 GSPTLLFLPGIDGL--------GLGLI----LHHKPL-GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRR---------- 234 (468)
Q Consensus 178 ~~p~lV~lHG~~~s--------~~~~~----~~~~~L-~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~---------- 234 (468)
++++|||+||++++ ...|. .+.+.| ..+|+|+++|+||||.|.. -...+...++.
T Consensus 51 ~~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~~Gy~Via~Dl~G~G~S~~--~~~~l~~~i~~g~g~sg~~~~ 128 (431)
T 2hih_A 51 NKDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRKAGYETYEASVSALASNHE--RAVELYYYLKGGRVDYGAAHS 128 (431)
T ss_dssp CSSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHHTTCCEEEECCCSSSCHHH--HHHHHHHHHHCEEEECCHHHH
T ss_pred CCCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHhCCCEEEEEcCCCCCCCcc--chHHhhhhhhhcccccccccc
Confidence 46789999999875 24564 478888 5789999999999998742 11222221110
Q ss_pred --------------HhhcCC-CCcEEEEEeChhHHHHHHHHHh--------------------------CCCCceEEEEe
Q 012190 235 --------------EHASSP-EKPIYLVGDSFGGCLALAVAAR--------------------------NPTIDLILILS 273 (468)
Q Consensus 235 --------------~~~~~~-~~~i~LvGhS~GG~ia~~~a~~--------------------------~P~~v~~lVli 273 (468)
+..... .++++||||||||.++..+|.. +|++|.++|++
T Consensus 129 ~~~~~~~~a~dl~~ll~~l~~~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~V~slv~i 208 (431)
T 2hih_A 129 EKYGHERYGKTYEGVLKDWKPGHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNMVTSITTI 208 (431)
T ss_dssp HHHTCCSEEEEECCSCTTCBTTBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSCEEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHHhCCCCCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcccceeEEEEE
Confidence 000011 3689999999999999998876 78999999999
Q ss_pred CCCC
Q 012190 274 NPAT 277 (468)
Q Consensus 274 ~p~~ 277 (468)
+++.
T Consensus 209 ~tP~ 212 (431)
T 2hih_A 209 ATPH 212 (431)
T ss_dssp SCCT
T ss_pred CCCC
Confidence 9854
|
| >3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=4.2e-10 Score=113.32 Aligned_cols=99 Identities=9% Similarity=-0.013 Sum_probs=66.5
Q ss_pred CCCeEEEeCCCCCchhhH----------------------HHhHhh-hcCCeEEEEecCCCCCCCCh------HHHHHHH
Q 012190 178 GSPTLLFLPGIDGLGLGL----------------------ILHHKP-LGKAFEVRCLHIPVYDRTPF------EGLVKFV 228 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~----------------------~~~~~~-L~~~~~V~~~D~~G~G~Ss~------~~~~~dl 228 (468)
+.|+|.+-||..+..... ..+... +.++|.|+++|++|+|.+-. ....+.+
T Consensus 105 ~~pvvs~~hgt~g~~~~CaPS~~~~~~~~~~~~~~~~~e~~~~~~~~l~~G~~Vv~~Dy~G~G~~y~~~~~~~~~vlD~v 184 (462)
T 3guu_A 105 PPKIFSYQVYEDATALDCAPSYSYLTGLDQPNKVTAVLDTPIIIGWALQQGYYVVSSDHEGFKAAFIAGYEEGMAILDGI 184 (462)
T ss_dssp SCEEEEEECCCCCCSGGGCHHHHHBSCSCCTTGGGGSTHHHHHHHHHHHTTCEEEEECTTTTTTCTTCHHHHHHHHHHHH
T ss_pred CCcEEEEeCCcccCCCCcCCccccccCCCccccchhhhhHHHHHHHHHhCCCEEEEecCCCCCCcccCCcchhHHHHHHH
Confidence 368999999998754311 112344 68899999999999997621 1222333
Q ss_pred HHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhC----CC-CceEEEEeCCCC
Q 012190 229 EETVRREHASSPEKPIYLVGDSFGGCLALAVAARN----PT-IDLILILSNPAT 277 (468)
Q Consensus 229 ~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~----P~-~v~~lVli~p~~ 277 (468)
.+..+... .....++.++|||+||..++..|... |+ .+.+.+..+++.
T Consensus 185 rAa~~~~~-~~~~~~v~l~G~S~GG~aal~aa~~~~~yapel~~~g~~~~~~p~ 237 (462)
T 3guu_A 185 RALKNYQN-LPSDSKVALEGYSGGAHATVWATSLAESYAPELNIVGASHGGTPV 237 (462)
T ss_dssp HHHHHHTT-CCTTCEEEEEEETHHHHHHHHHHHHHHHHCTTSEEEEEEEESCCC
T ss_pred HHHHHhcc-CCCCCCEEEEeeCccHHHHHHHHHhChhhcCccceEEEEEecCCC
Confidence 33322211 11347999999999999998887754 33 588888888866
|
| >2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A | Back alignment and structure |
|---|
Probab=99.19 E-value=2.6e-11 Score=119.63 Aligned_cols=98 Identities=13% Similarity=0.080 Sum_probs=71.6
Q ss_pred CCCeEEEeCCCCCchh-------hHHHh----Hhhh-cCCeEEEEecCCCCCCCChHHHHHHHHHHHHH--------H--
Q 012190 178 GSPTLLFLPGIDGLGL-------GLILH----HKPL-GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRR--------E-- 235 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~-------~~~~~----~~~L-~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~--------~-- 235 (468)
++++|||+||++++.. .|..+ .+.| ..+|+|+++|+||||.+. +.+.++...++. +
T Consensus 5 ~~~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~~G~~Via~Dl~g~G~s~--~~a~~l~~~i~~~~vDy~~~~a~ 82 (387)
T 2dsn_A 5 NDAPIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLSSNW--DRACEAYAQLVGGTVDYGAAHAA 82 (387)
T ss_dssp CCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEEECCCSSBCHH--HHHHHHHHHHHCEEEECCHHHHH
T ss_pred CCCcEEEECCCCCCCcccccccchhhhhhHHHHHHHHHCCCEEEEecCCCCCCcc--ccHHHHHHHHHhhhhhhhhhhhh
Confidence 4678999999988753 36644 4888 568999999999999773 233344444431 0
Q ss_pred ---------------hhcCCCCcEEEEEeChhHHHHHHHHHh-------------------CC------CCceEEEEeCC
Q 012190 236 ---------------HASSPEKPIYLVGDSFGGCLALAVAAR-------------------NP------TIDLILILSNP 275 (468)
Q Consensus 236 ---------------~~~~~~~~i~LvGhS~GG~ia~~~a~~-------------------~P------~~v~~lVli~p 275 (468)
....+.++++||||||||.++..+|.+ +| ++|.++|++++
T Consensus 83 ~~~~~~~~~~l~~ll~~~~~~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~~~V~sLV~i~t 162 (387)
T 2dsn_A 83 KHGHARFGRTYPGLLPELKRGGRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGHHFVLSVTTIAT 162 (387)
T ss_dssp HHTSCSEEEEECCSCGGGGTTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCEEEEEEESC
T ss_pred hccchhhhhhHHHHHHHhcCCCceEEEEECHHHHHHHHHHHHhccccccccccccccccccCccccccccceeEEEEECC
Confidence 000245699999999999999999973 36 79999999998
Q ss_pred CC
Q 012190 276 AT 277 (468)
Q Consensus 276 ~~ 277 (468)
+.
T Consensus 163 P~ 164 (387)
T 2dsn_A 163 PH 164 (387)
T ss_dssp CT
T ss_pred CC
Confidence 54
|
| >1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=6.7e-10 Score=106.39 Aligned_cols=100 Identities=9% Similarity=-0.079 Sum_probs=72.3
Q ss_pred CCCeEEEeCCCCCchhhH-------HHhHhhh-cC----CeEEEEecCCCCCC--CCh-HHHHHHHHHHHHHHhhcC---
Q 012190 178 GSPTLLFLPGIDGLGLGL-------ILHHKPL-GK----AFEVRCLHIPVYDR--TPF-EGLVKFVEETVRREHASS--- 239 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~-------~~~~~~L-~~----~~~V~~~D~~G~G~--Ss~-~~~~~dl~~~i~~~~~~~--- 239 (468)
..|+||++||.+++...| ..++..| +. ++.|+++|.+|-.. ..+ +.+++++..+++......
T Consensus 68 ~~Pvlv~lHG~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ivv~pd~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~ 147 (297)
T 1gkl_A 68 KYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGNCTAQNFYQEFRQNVIPFVESKYSTYAES 147 (297)
T ss_dssp CCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHTTSSCCEEEEECCSCSTTCCTTTHHHHHHHTHHHHHHHHSCSSCSS
T ss_pred CCCEEEEECCCCCCcchhhcccchHHHHHHHHHHcCCCCCEEEEEecCcCCccchHHHHHHHHHHHHHHHHHhCCccccc
Confidence 467899999998765543 3445555 33 59999999876321 123 344567777776642211
Q ss_pred --------CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 240 --------PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 240 --------~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
...++.++|+||||.+|+.++.++|+++.+++++++..
T Consensus 148 ~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p~~f~~~v~~sg~~ 193 (297)
T 1gkl_A 148 TTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDY 193 (297)
T ss_dssp CSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCC
T ss_pred cccccccCCccceEEEEECHHHHHHHHHHHhCchhhheeeEecccc
Confidence 23468999999999999999999999999999999864
|
| >3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=7.7e-11 Score=122.35 Aligned_cols=122 Identities=12% Similarity=-0.045 Sum_probs=91.9
Q ss_pred CccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchh-hH---H-------------------HhHhhh-cCCeEEEE
Q 012190 155 EIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGL-GL---I-------------------LHHKPL-GKAFEVRC 210 (468)
Q Consensus 155 ~~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~-~~---~-------------------~~~~~L-~~~~~V~~ 210 (468)
.+...||..+....|.+.+. ...|+||+.||++.... .+ . .....| .+||.|++
T Consensus 45 ~i~~~DG~~L~a~l~~P~~~--~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~Gy~vv~ 122 (560)
T 3iii_A 45 TVEMRDGEKLYINIFRPNKD--GKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFWVPNDYVVVK 122 (560)
T ss_dssp EEECTTSCEEEEEEEECSSS--SCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHHGGGTCEEEE
T ss_pred EEECCCCcEEEEEEEecCCC--CCCCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHHHHhCCCEEEE
Confidence 45667887765555555443 24689999999998731 11 0 124556 67899999
Q ss_pred ecCCCCCCCC-----h-HHHHHHHHHHHHHHhhcC-CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCC
Q 012190 211 LHIPVYDRTP-----F-EGLVKFVEETVRREHASS-PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (468)
Q Consensus 211 ~D~~G~G~Ss-----~-~~~~~dl~~~i~~~~~~~-~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~ 278 (468)
+|+||+|.|. + ....+|+.++++.+.... ...+|.++||||||.+++.+|+.+|+.++++|..++...
T Consensus 123 ~D~RG~G~S~G~~~~~~~~~~~D~~~~i~~l~~~~~~~~~igl~G~S~GG~~al~~a~~~p~~l~aiv~~~~~~d 197 (560)
T 3iii_A 123 VALRGSDKSKGVLSPWSKREAEDYYEVIEWAANQSWSNGNIGTNGVSYLAVTQWWVASLNPPHLKAMIPWEGLND 197 (560)
T ss_dssp EECTTSTTCCSCBCTTSHHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHTTCCTTEEEEEEESCCCB
T ss_pred EcCCCCCCCCCccccCChhHHHHHHHHHHHHHhCCCCCCcEEEEccCHHHHHHHHHHhcCCCceEEEEecCCccc
Confidence 9999999984 3 367788888888876431 135899999999999999999999999999999998664
|
| >2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A | Back alignment and structure |
|---|
Probab=99.14 E-value=1.1e-10 Score=123.77 Aligned_cols=123 Identities=11% Similarity=-0.011 Sum_probs=89.0
Q ss_pred CccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchh--------hHHHh---H-hhh-cCCeEEEEecCCCCCCCC-
Q 012190 155 EIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGL--------GLILH---H-KPL-GKAFEVRCLHIPVYDRTP- 220 (468)
Q Consensus 155 ~~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~--------~~~~~---~-~~L-~~~~~V~~~D~~G~G~Ss- 220 (468)
.+...||..+....|.+.+. ...|+||++||++.... .|... . +.| .+||.|+.+|+||+|.|.
T Consensus 41 ~i~~~DG~~L~~~l~~P~~~--~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~~GyaVv~~D~RG~g~S~g 118 (652)
T 2b9v_A 41 MVPMRDGVKLYTVIVIPKNA--RNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKYGSQG 118 (652)
T ss_dssp EEECTTSCEEEEEEEEETTC--CSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCS
T ss_pred EEECCCCcEEEEEEEecCCC--CCccEEEEECCCCCCcccccccccccccccccchHHHHHhCCCEEEEEecCcCCCCCC
Confidence 45566776544333343332 23578899998876521 12111 2 556 789999999999999883
Q ss_pred ----h-------H----HHHHHHHHHHHHHhhc--CCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCC
Q 012190 221 ----F-------E----GLVKFVEETVRREHAS--SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSF 279 (468)
Q Consensus 221 ----~-------~----~~~~dl~~~i~~~~~~--~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~ 279 (468)
. . ..++|+.++++.+... ....+|.++||||||.+++.+|+++|+.++++|+.++....
T Consensus 119 ~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d~rvgl~G~SyGG~~al~~a~~~~~~lka~v~~~~~~d~ 194 (652)
T 2b9v_A 119 DYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMVDG 194 (652)
T ss_dssp CCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEECCCT
T ss_pred cccccccccccccccccchhhHHHHHHHHHHhcCCCCCCCEEEEecCHHHHHHHHHHhcCCCceEEEEeccccccc
Confidence 2 2 6778888888887654 22358999999999999999999999999999999887654
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
Probab=99.08 E-value=3.6e-10 Score=112.64 Aligned_cols=121 Identities=11% Similarity=0.081 Sum_probs=84.1
Q ss_pred CccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhH--------------H----HhHhhh-cCCeEEEEecCCC
Q 012190 155 EIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGL--------------I----LHHKPL-GKAFEVRCLHIPV 215 (468)
Q Consensus 155 ~~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~--------------~----~~~~~L-~~~~~V~~~D~~G 215 (468)
.+...+|.......+.+.+. ....|+||++||++++...+ . .++..| ..||.|+++|+||
T Consensus 91 ~~~~~~g~~l~~~l~~P~~~-~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~G~~Vl~~D~rg 169 (391)
T 3g8y_A 91 EFYPFPKSVSTFLVLKPEHL-KGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKEGYVAVAVDNAA 169 (391)
T ss_dssp EECCSTTCCEEEEEEEETTC-CSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHTTTCEEEECCCTT
T ss_pred EEEcCCCCEEEEEEEeCCCC-CCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHHCCCEEEEecCCC
Confidence 34455665544433434331 12468999999999987633 2 456677 6789999999999
Q ss_pred CCCCC------------hHHHH---------------HHHHHHHHHHhhcC--CCCcEEEEEeChhHHHHHHHHHhCCCC
Q 012190 216 YDRTP------------FEGLV---------------KFVEETVRREHASS--PEKPIYLVGDSFGGCLALAVAARNPTI 266 (468)
Q Consensus 216 ~G~Ss------------~~~~~---------------~dl~~~i~~~~~~~--~~~~i~LvGhS~GG~ia~~~a~~~P~~ 266 (468)
+|.+. ...++ .|+..+++.+.... ...+|.++||||||.+++.+|+.. ++
T Consensus 170 ~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~al~~a~~~-~~ 248 (391)
T 3g8y_A 170 AGEASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPMMVLGVLD-KD 248 (391)
T ss_dssp SGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHHHHHHHHHC-TT
T ss_pred ccccCCcccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChhHHHHHHHHHcC-Cc
Confidence 99874 22222 56777777765432 235799999999999999888765 67
Q ss_pred ceEEEEeCCCC
Q 012190 267 DLILILSNPAT 277 (468)
Q Consensus 267 v~~lVli~p~~ 277 (468)
++++|+.++..
T Consensus 249 i~a~v~~~~~~ 259 (391)
T 3g8y_A 249 IYAFVYNDFLC 259 (391)
T ss_dssp CCEEEEESCBC
T ss_pred eeEEEEccCCC
Confidence 99999887643
|
| >2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=99.05 E-value=5.5e-10 Score=105.69 Aligned_cols=116 Identities=14% Similarity=0.140 Sum_probs=69.9
Q ss_pred CCCceeeeecCCCC-CCCCCCeEEEeCCCCCch--hhHHHhHhhh--cCC---eEEEEecCCCC------------CCC-
Q 012190 161 GGPPRWFCPVDCGR-PLKGSPTLLFLPGIDGLG--LGLILHHKPL--GKA---FEVRCLHIPVY------------DRT- 219 (468)
Q Consensus 161 g~~~~~~~y~~~g~-~~~~~p~lV~lHG~~~s~--~~~~~~~~~L--~~~---~~V~~~D~~G~------------G~S- 219 (468)
|......-|.+.+- +.+.-|+|+++||.+... ..+......+ ..+ +-|+++|+|+. +..
T Consensus 29 g~~~~~~v~~P~~~~~~~~~Pvl~~lhG~~~~~~~~~~~~~~~~~~~~~g~~~~ivV~i~~~~~~~~~~~~r~~~~~~~~ 108 (275)
T 2qm0_A 29 GKEYQIHISKPKQPAPDSGYPVIYVLDGNAFFQTFHEAVKIQSVRAEKTGVSPAIIVGVGYPIEGAFSGEERCYDFTPSV 108 (275)
T ss_dssp CCEEEEEEECCSSCCCTTCEEEEEEESHHHHHHHHHHHHHHHGGGHHHHCCCCCEEEEEECSCSSSCCHHHHHHHHCSSC
T ss_pred CCEEEEEEECCCCCCCCCCccEEEEecChHHHHHHHHHHHHHhhcchhcCCCCeEEEEECCCCCCcCcccccccccCCCC
Confidence 34333334444432 123468899999976422 2343344444 224 88999998862 100
Q ss_pred ------------------ChHHHH----HHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 220 ------------------PFEGLV----KFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 220 ------------------s~~~~~----~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
..+++. +++..+++.... ....+++++||||||.+|+.++.++|+.++++++++|..
T Consensus 109 ~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~l~~~i~~~~~-~~~~~~~~~G~S~GG~~a~~~~~~~p~~f~~~~~~s~~~ 187 (275)
T 2qm0_A 109 ISKDAPLKPDGKPWPKTGGAHNFFTFIEEELKPQIEKNFE-IDKGKQTLFGHXLGGLFALHILFTNLNAFQNYFISSPSI 187 (275)
T ss_dssp CCC---------CCCCCCCHHHHHHHHHHTHHHHHHHHSC-EEEEEEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCT
T ss_pred ccccCCccccCCcCCCCCChHHHHHHHHHHHHHHHHhhcc-CCCCCCEEEEecchhHHHHHHHHhCchhhceeEEeCcee
Confidence 001222 333333333211 112589999999999999999999999999999998753
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.01 E-value=9.1e-10 Score=110.02 Aligned_cols=117 Identities=12% Similarity=0.102 Sum_probs=81.4
Q ss_pred cCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHH------------------HhHhhh-cCCeEEEEecCCCCC
Q 012190 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLI------------------LHHKPL-GKAFEVRCLHIPVYD 217 (468)
Q Consensus 157 ~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~------------------~~~~~L-~~~~~V~~~D~~G~G 217 (468)
...+|.......+.+.+. ....|+||++||.+++...+. .++..| ..||.|+++|+||+|
T Consensus 98 ~~~~g~~l~~~l~~P~~~-~~~~P~Vv~~HG~g~~~~~~~~~~g~~~~~~~~y~~~~~~~a~~la~~Gy~Vl~~D~rG~G 176 (398)
T 3nuz_A 98 YPLPKCVSTFLVLIPDNI-NKPVPAILCIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLTQALNFVKEGYIAVAVDNPAAG 176 (398)
T ss_dssp CCSTTBCEEEEEEEESSC-CSCEEEEEEECCTTCCHHHHHTCCCSSSTTCCSTTCTTTCHHHHHHTTTCEEEEECCTTSG
T ss_pred EcCCCcEEEEEEEeCCCC-CCCccEEEEEcCCCCCcccccccccccccccccccchHHHHHHHHHHCCCEEEEecCCCCC
Confidence 344555543333333331 124689999999999776433 466777 678999999999999
Q ss_pred CCCh---------------------------HHHHHHHHHHHHHHhhcC--CCCcEEEEEeChhHHHHHHHHHhCCCCce
Q 012190 218 RTPF---------------------------EGLVKFVEETVRREHASS--PEKPIYLVGDSFGGCLALAVAARNPTIDL 268 (468)
Q Consensus 218 ~Ss~---------------------------~~~~~dl~~~i~~~~~~~--~~~~i~LvGhS~GG~ia~~~a~~~P~~v~ 268 (468)
.+.. ...+.|+..+++.+.... ...+|.++||||||.+++.+|+.. ++++
T Consensus 177 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG~~a~~~aa~~-~~i~ 255 (398)
T 3nuz_A 177 EASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPMMVLGTLD-TSIY 255 (398)
T ss_dssp GGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGHHHHHHHHHHC-TTCC
T ss_pred ccccccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEECHhHHHHHHHHhcC-CcEE
Confidence 8741 112356677777765432 235899999999999999888775 5788
Q ss_pred EEEEeCC
Q 012190 269 ILILSNP 275 (468)
Q Consensus 269 ~lVli~p 275 (468)
++|.+++
T Consensus 256 a~v~~~~ 262 (398)
T 3nuz_A 256 AFVYNDF 262 (398)
T ss_dssp EEEEESC
T ss_pred EEEEecc
Confidence 8888765
|
| >3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* | Back alignment and structure |
|---|
Probab=98.88 E-value=1.2e-08 Score=102.07 Aligned_cols=101 Identities=16% Similarity=0.055 Sum_probs=65.4
Q ss_pred CCCCeEEEeCCCCCchh-hHHHhHhhh-cCCe----EEEEecCCCCC-CC-------ChH-HHHHHHHHHHHHHhh-cCC
Q 012190 177 KGSPTLLFLPGIDGLGL-GLILHHKPL-GKAF----EVRCLHIPVYD-RT-------PFE-GLVKFVEETVRREHA-SSP 240 (468)
Q Consensus 177 ~~~p~lV~lHG~~~s~~-~~~~~~~~L-~~~~----~V~~~D~~G~G-~S-------s~~-~~~~dl~~~i~~~~~-~~~ 240 (468)
+..|+|+++||.+.... .+...+..| .+++ .|+++|.+|++ ++ .+. .+++++..+++.... ...
T Consensus 195 ~~~PvlvllHG~~~~~~~~~~~~~~~l~~~g~~~p~iVV~~d~~~~~~r~~~~~~~~~~~~~l~~el~~~i~~~~~~~~d 274 (403)
T 3c8d_A 195 EERPLAVLLDGEFWAQSMPVWPVLTSLTHRQQLPPAVYVLIDAIDTTHRAHELPCNADFWLAVQQELLPLVKVIAPFSDR 274 (403)
T ss_dssp CCCCEEEESSHHHHHHTSCCHHHHHHHHHTTSSCSCEEEEECCCSHHHHHHHSSSCHHHHHHHHHTHHHHHHHHSCCCCC
T ss_pred CCCCEEEEeCCHHHhhcCcHHHHHHHHHHcCCCCCeEEEEECCCCCccccccCCChHHHHHHHHHHHHHHHHHHCCCCCC
Confidence 35789999999321100 112234555 3443 59999998732 11 122 223455555554211 112
Q ss_pred CCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 241 EKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 241 ~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
..+++|+||||||.+|+.++.++|+.+.++++++|..
T Consensus 275 ~~~~~l~G~S~GG~~al~~a~~~p~~f~~~~~~sg~~ 311 (403)
T 3c8d_A 275 ADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSY 311 (403)
T ss_dssp GGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCT
T ss_pred CCceEEEEECHHHHHHHHHHHhCchhhcEEEEecccc
Confidence 3589999999999999999999999999999998865
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=4.4e-07 Score=87.21 Aligned_cols=47 Identities=13% Similarity=0.151 Sum_probs=39.5
Q ss_pred CceEEEEEeCCCCCCCcHHHHHHHHHhCC------CcEEEEeCCCCccccccCc
Q 012190 379 KAEVLVLASGKDNMLPSEDEAKRLNNSLQ------NCIVRNFKDNGHTLLLEEG 426 (468)
Q Consensus 379 ~~PvLlI~G~~D~~v~~~~~~~~l~~~l~------~~~~~~i~~aGH~~~~e~p 426 (468)
..|++++||++|.++|++ ..+++.+.+. +++++.++++||.+..+.+
T Consensus 90 ~~Pvli~HG~~D~vVP~~-~s~~~~~~L~~~g~~~~ve~~~~~g~gH~~~~~~~ 142 (318)
T 2d81_A 90 QRKIYMWTGSSDTTVGPN-VMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTDFN 142 (318)
T ss_dssp GCEEEEEEETTCCSSCHH-HHHHHHHHHTTTSCGGGEEEEEETTCCSSEEESSC
T ss_pred CCcEEEEeCCCCCCcCHH-HHHHHHHHHHhcCCCcceEEEEeCCCCCCCccCCc
Confidence 359999999999999999 7888888664 4688999999999776654
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.50 E-value=7.2e-07 Score=102.14 Aligned_cols=90 Identities=20% Similarity=0.269 Sum_probs=71.7
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHH
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALA 258 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~ 258 (468)
.+.++|+|+.++....|..+...|. .+.|++++.++. +++++...+.++.. .+..++.++|||+||.+|..
T Consensus 1058 ~~~L~~l~~~~g~~~~y~~la~~L~-~~~v~~l~~~~~-----~~~~~~~~~~i~~~---~~~gp~~l~G~S~Gg~lA~e 1128 (1304)
T 2vsq_A 1058 EQIIFAFPPVLGYGLMYQNLSSRLP-SYKLCAFDFIEE-----EDRLDRYADLIQKL---QPEGPLTLFGYSAGCSLAFE 1128 (1304)
T ss_dssp CCEEECCCCTTCBGGGGHHHHTTCC-SCEEEECBCCCS-----TTHHHHHHHHHHHH---CCSSCEEEEEETTHHHHHHH
T ss_pred CCcceeecccccchHHHHHHHhccc-ccceEeecccCH-----HHHHHHHHHHHHHh---CCCCCeEEEEecCCchHHHH
Confidence 5689999999999999999998888 899999987543 45666666666553 34458999999999999999
Q ss_pred HHHhC---CCCceEEEEeCCCC
Q 012190 259 VAARN---PTIDLILILSNPAT 277 (468)
Q Consensus 259 ~a~~~---P~~v~~lVli~p~~ 277 (468)
+|.+. .+.+..++++++..
T Consensus 1129 ~A~~L~~~g~~v~~l~lld~~~ 1150 (1304)
T 2vsq_A 1129 AAKKLEEQGRIVQRIIMVDSYK 1150 (1304)
T ss_dssp HHHHHHHSSCCEEEEEEESCCE
T ss_pred HHHHHHhCCCceeEEEEecCcc
Confidence 99764 35688899998754
|
| >3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=98.44 E-value=8.5e-07 Score=85.90 Aligned_cols=51 Identities=18% Similarity=0.239 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 225 VKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 225 ~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
.+++...++..... .....++||||||..++.++.++|+.+.+++.++|..
T Consensus 122 ~~el~p~i~~~~~~--~~~r~i~G~S~GG~~al~~~~~~p~~F~~~~~~S~~~ 172 (331)
T 3gff_A 122 EKELAPSIESQLRT--NGINVLVGHSFGGLVAMEALRTDRPLFSAYLALDTSL 172 (331)
T ss_dssp HHTHHHHHHHHSCE--EEEEEEEEETHHHHHHHHHHHTTCSSCSEEEEESCCT
T ss_pred HHHHHHHHHHHCCC--CCCeEEEEECHHHHHHHHHHHhCchhhheeeEeCchh
Confidence 34455555543211 1234799999999999999999999999999999854
|
| >2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A* | Back alignment and structure |
|---|
Probab=98.27 E-value=4.3e-06 Score=78.90 Aligned_cols=34 Identities=21% Similarity=0.217 Sum_probs=31.3
Q ss_pred CcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCC
Q 012190 242 KPIYLVGDSFGGCLALAVAARNPTIDLILILSNPA 276 (468)
Q Consensus 242 ~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~ 276 (468)
.+++++||||||.+|+.++.+ |+.+.++++++|.
T Consensus 141 ~r~~i~G~S~GG~~a~~~~~~-p~~f~~~~~~s~~ 174 (278)
T 2gzs_A 141 QRRGLWGHSYGGLFVLDSWLS-SSYFRSYYSASPS 174 (278)
T ss_dssp EEEEEEEETHHHHHHHHHHHH-CSSCSEEEEESGG
T ss_pred CceEEEEECHHHHHHHHHHhC-ccccCeEEEeCcc
Confidence 368999999999999999999 9999999999874
|
| >4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=2.9e-05 Score=73.88 Aligned_cols=100 Identities=13% Similarity=0.081 Sum_probs=66.1
Q ss_pred CCCeEEEeCCCCCchhhHHHh--Hhhh--cCCeEEEEecCC-------CC---------CCC--------------C-hH
Q 012190 178 GSPTLLFLPGIDGLGLGLILH--HKPL--GKAFEVRCLHIP-------VY---------DRT--------------P-FE 222 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~--~~~L--~~~~~V~~~D~~-------G~---------G~S--------------s-~~ 222 (468)
.-|+|.++||++++...|... +..+ ..+..++++|.. +- +.+ . .+
T Consensus 48 ~~PVLYlLhG~~~~~~~w~~~~~~~~~~~~~~~~~v~p~~~p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~ 127 (299)
T 4fol_A 48 RIPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYD 127 (299)
T ss_dssp CBCEEEEECCTTCCHHHHHHHSCHHHHHHHHTCEEEEECSSCCSTTSCCCTTCCSSSBTTBCTTCBCCSHHHHTTCBHHH
T ss_pred CcCEEEEECCCCCChHHHHHhchHhHHHHHcCchhhccCCCcceeecCCCcccccccccCCccccccccCccccCccHHH
Confidence 468999999999999988753 2333 234667766531 11 111 1 23
Q ss_pred HHHHHHHHHHHHHhhcCC------CCcEEEEEeChhHHHHHHHHHhC--CCCceEEEEeCCCC
Q 012190 223 GLVKFVEETVRREHASSP------EKPIYLVGDSFGGCLALAVAARN--PTIDLILILSNPAT 277 (468)
Q Consensus 223 ~~~~dl~~~i~~~~~~~~------~~~i~LvGhS~GG~ia~~~a~~~--P~~v~~lVli~p~~ 277 (468)
.+++++..+++..-.... ..+..|.||||||.-|+.+|.++ |+...++...+|..
T Consensus 128 ~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~al~~~~~~~~~~~~s~s~~~ 190 (299)
T 4fol_A 128 YIHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGYLKGYSGKRYKSCSAFAPIV 190 (299)
T ss_dssp HHHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHHHHTGGGTCCSEEEEESCCC
T ss_pred HHHHHhHHHHHHhcccccccccccccceEEEecCchHHHHHHHHHhCCCCCceEEEEeccccc
Confidence 456777777765442211 23578999999999999999985 66777888777654
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=98.11 E-value=0.0001 Score=74.76 Aligned_cols=102 Identities=15% Similarity=0.064 Sum_probs=72.9
Q ss_pred CCCCeEEEeCCCCCchhhHHHhH-----------------hhhcCCeEEEEecC-CCCCCC-----------------Ch
Q 012190 177 KGSPTLLFLPGIDGLGLGLILHH-----------------KPLGKAFEVRCLHI-PVYDRT-----------------PF 221 (468)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~~~~~-----------------~~L~~~~~V~~~D~-~G~G~S-----------------s~ 221 (468)
.+.|++|+++|.+|++..+..+. ..+.+..+++-+|. .|.|.| +.
T Consensus 65 ~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~~~~~~~l~~n~~sw~~~~n~lfiDqPvGtGfSy~~~~~~~~~~~~~~~~~~ 144 (483)
T 1ac5_A 65 VDRPLIIWLNGGPGCSSMDGALVESGPFRVNSDGKLYLNEGSWISKGDLLFIDQPTGTGFSVEQNKDEGKIDKNKFDEDL 144 (483)
T ss_dssp SSCCEEEEECCTTTBCTHHHHHHSSSSEEECTTSCEEECTTCGGGTSEEEEECCSTTSTTCSSCCSSGGGSCTTSSCCSH
T ss_pred cCCCEEEEECCCCchHhhhhhHhhcCCeEecCCCceeecccchhhcCCeEEEecCCCccccCCcCcccccccccccCCCH
Confidence 46899999999999887663322 11234578999997 588866 23
Q ss_pred HHHHHHHHHHHHHHhhcCC---CCcEEEEEeChhHHHHHHHHHhC------------CCCceEEEEeCCCCC
Q 012190 222 EGLVKFVEETVRREHASSP---EKPIYLVGDSFGGCLALAVAARN------------PTIDLILILSNPATS 278 (468)
Q Consensus 222 ~~~~~dl~~~i~~~~~~~~---~~~i~LvGhS~GG~ia~~~a~~~------------P~~v~~lVli~p~~~ 278 (468)
++.++++..+++......+ ..+++|.|+|+||..+..+|..- +-.++|+++-+|...
T Consensus 145 ~~~a~~~~~fl~~~~~~fP~~~~~~~~i~GeSYgg~y~p~~a~~i~~~n~~~~~~~~~inLkGi~IGNg~~d 216 (483)
T 1ac5_A 145 EDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDLKALLIGNGWID 216 (483)
T ss_dssp HHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHhChhhcCCCEEEEeccccccccHHHHHHHHHhcccccccCcccceeeeEecCCccc
Confidence 5667777777777654443 56899999999999988777431 135789988887663
|
| >2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A | Back alignment and structure |
|---|
Probab=98.02 E-value=8.4e-06 Score=83.47 Aligned_cols=101 Identities=13% Similarity=0.061 Sum_probs=67.7
Q ss_pred CCCeEEEeCCCC---CchhhHHHhHhhh-cCC-eEEEEecCC----CCCCCC----------hHHHHHHHHHHHHHHhhc
Q 012190 178 GSPTLLFLPGID---GLGLGLILHHKPL-GKA-FEVRCLHIP----VYDRTP----------FEGLVKFVEETVRREHAS 238 (468)
Q Consensus 178 ~~p~lV~lHG~~---~s~~~~~~~~~~L-~~~-~~V~~~D~~----G~G~Ss----------~~~~~~dl~~~i~~~~~~ 238 (468)
+.|+||++||.+ ++..........| .++ +.|+.+|+| |++.+. ...-..|....++.+...
T Consensus 98 ~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~~~~~n~gl~D~~~al~wv~~~ 177 (498)
T 2ogt_A 98 KRPVLFWIHGGAFLFGSGSSPWYDGTAFAKHGDVVVVTINYRMNVFGFLHLGDSFGEAYAQAGNLGILDQVAALRWVKEN 177 (498)
T ss_dssp CEEEEEEECCSTTTSCCTTCGGGCCHHHHHHHTCEEEEECCCCHHHHCCCCTTTTCGGGTTGGGHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEcCCccCCCCCCCCcCCHHHHHhCCCEEEEeCCCcCchhhccCchhhccccccCCCCcccHHHHHHHHHHHHH
Confidence 468999999987 5554433334555 334 999999999 776542 122233444444433321
Q ss_pred ---C--CCCcEEEEEeChhHHHHHHHHHhC--CCCceEEEEeCCCCC
Q 012190 239 ---S--PEKPIYLVGDSFGGCLALAVAARN--PTIDLILILSNPATS 278 (468)
Q Consensus 239 ---~--~~~~i~LvGhS~GG~ia~~~a~~~--P~~v~~lVli~p~~~ 278 (468)
. ...+|.|+|+|.||.+++.++... +..++++|+.++...
T Consensus 178 i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~ 224 (498)
T 2ogt_A 178 IAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSGS 224 (498)
T ss_dssp GGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred HHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCCcc
Confidence 1 235799999999999998777653 467999999998654
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=97.94 E-value=5.3e-05 Score=76.16 Aligned_cols=103 Identities=17% Similarity=0.108 Sum_probs=71.4
Q ss_pred CCCCeEEEeCCCCCchhhHHHhHh------------------hhcCCeEEEEecC-CCCCCCC---------hHHHHHHH
Q 012190 177 KGSPTLLFLPGIDGLGLGLILHHK------------------PLGKAFEVRCLHI-PVYDRTP---------FEGLVKFV 228 (468)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~~~~~~------------------~L~~~~~V~~~D~-~G~G~Ss---------~~~~~~dl 228 (468)
.+.|++|++||.+|++..+..+.+ .+.+..+++-+|. +|.|.|- -+..++++
T Consensus 46 ~~~Pl~lwlnGGPG~Ss~~g~~~e~GP~~~~~~~~~l~~n~~sw~~~~~~lfiDqP~GtGfS~~~~~~~~~~~~~~a~~~ 125 (452)
T 1ivy_A 46 ENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAGVGFSYSDDKFYATNDTEVAQSN 125 (452)
T ss_dssp GGSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCGGGSSEEEEECCSTTSTTCEESSCCCCCBHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHhcCCcEEeCCCceeeeCCCcccccccEEEEecCCCCCcCCcCCCCCcCCcHHHHHHH
Confidence 458999999999998776533211 1135688999997 6999871 23455555
Q ss_pred HHHHHHHhhc---CCCCcEEEEEeChhHHHHHHHHHh----CCCCceEEEEeCCCCCC
Q 012190 229 EETVRREHAS---SPEKPIYLVGDSFGGCLALAVAAR----NPTIDLILILSNPATSF 279 (468)
Q Consensus 229 ~~~i~~~~~~---~~~~~i~LvGhS~GG~ia~~~a~~----~P~~v~~lVli~p~~~~ 279 (468)
.+++...... ....+++|.|+|+||..+..+|.. .+-.++|+++.+|....
T Consensus 126 ~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i~~~~~~~l~g~~ign~~~d~ 183 (452)
T 1ivy_A 126 FEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGLSSY 183 (452)
T ss_dssp HHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCCSBH
T ss_pred HHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHHHhcCccccceEEecCCccCh
Confidence 4444443332 345799999999999966666543 46789999999997643
|
| >1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A | Back alignment and structure |
|---|
Probab=97.92 E-value=1.2e-05 Score=82.15 Aligned_cols=99 Identities=15% Similarity=0.124 Sum_probs=63.4
Q ss_pred CCeEEEeCCCC---CchhhHHHhHhhh-cC-CeEEEEecCC----CCCCCC-------hHHHHHHHHHHHHHHhh---cC
Q 012190 179 SPTLLFLPGID---GLGLGLILHHKPL-GK-AFEVRCLHIP----VYDRTP-------FEGLVKFVEETVRREHA---SS 239 (468)
Q Consensus 179 ~p~lV~lHG~~---~s~~~~~~~~~~L-~~-~~~V~~~D~~----G~G~Ss-------~~~~~~dl~~~i~~~~~---~~ 239 (468)
.|+||++||.+ ++...+......| .+ ++.|+.+|+| |++.+. ...-..|+..+++.+.. ..
T Consensus 97 ~PviV~iHGGg~~~g~~~~~~~~~~~la~~g~~vvv~~nYRlg~~Gf~~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~f 176 (489)
T 1qe3_A 97 LPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLGLLDQAAALKWVRENISAF 176 (489)
T ss_dssp EEEEEEECCSTTTSCCTTSGGGCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTCTTSCSCHHHHHHHHHHHHHHHHGGGG
T ss_pred CCEEEEECCCccccCCCCCcccCHHHHHhcCCEEEEecCccCcccccCccccccccCCCCcchHHHHHHHHHHHHHHHHh
Confidence 68999999965 4443333334555 33 4999999999 554431 11122333333333321 11
Q ss_pred --CCCcEEEEEeChhHHHHHHHHHhC--CCCceEEEEeCCCC
Q 012190 240 --PEKPIYLVGDSFGGCLALAVAARN--PTIDLILILSNPAT 277 (468)
Q Consensus 240 --~~~~i~LvGhS~GG~ia~~~a~~~--P~~v~~lVli~p~~ 277 (468)
...+|.|+|||+||.+++.++... ++.++++|+.++..
T Consensus 177 ggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 218 (489)
T 1qe3_A 177 GGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGAS 218 (489)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCC
T ss_pred CCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCC
Confidence 235899999999999988777653 57899999998865
|
| >1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A* | Back alignment and structure |
|---|
Probab=97.90 E-value=8.1e-05 Score=68.46 Aligned_cols=102 Identities=14% Similarity=0.060 Sum_probs=74.5
Q ss_pred CCCCeEEEeCCCCCchhhH-HHhH------------------hhhcCCeEEEEecCC-CCCCC-----------ChHHHH
Q 012190 177 KGSPTLLFLPGIDGLGLGL-ILHH------------------KPLGKAFEVRCLHIP-VYDRT-----------PFEGLV 225 (468)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~-~~~~------------------~~L~~~~~V~~~D~~-G~G~S-----------s~~~~~ 225 (468)
.+.|++|+++|.+|++..+ ..+. ..+.+..+++-+|.| |.|.| +.++.+
T Consensus 46 ~~~Pl~lwlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGtGfSy~~~~~~~~~~~~~~~a 125 (255)
T 1whs_A 46 QPAPLVLWLNGGPGCSSVAYGASEELGAFRVKPRGAGLVLNEYRWNKVANVLFLDSPAGVGFSYTNTSSDIYTSGDNRTA 125 (255)
T ss_dssp CSCCEEEEECCTTTBCTTTTHHHHTSSSEEECGGGCCEEECTTCGGGTSEEEEECCSTTSTTCEESSGGGGGSCCHHHHH
T ss_pred CCCCEEEEECCCCchHHHHHHHHhccCCeEecCCCCeeeeCcccccccCCEEEEecCCCCccCCCcCccccccCCHHHHH
Confidence 4689999999999988765 3221 112346889999975 88876 235667
Q ss_pred HHHHHHHHHHhhcC---CCCcEEEEEeChhHHHHHHHHHhC------CCCceEEEEeCCCCC
Q 012190 226 KFVEETVRREHASS---PEKPIYLVGDSFGGCLALAVAARN------PTIDLILILSNPATS 278 (468)
Q Consensus 226 ~dl~~~i~~~~~~~---~~~~i~LvGhS~GG~ia~~~a~~~------P~~v~~lVli~p~~~ 278 (468)
+++.++++....+. ...+++|.|+|+||..+..+|..- .-.++|+++.+|...
T Consensus 126 ~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inLkGi~ign~~~d 187 (255)
T 1whs_A 126 HDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINLKGFMVGNGLID 187 (255)
T ss_dssp HHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEEEEEEEEEECCB
T ss_pred HHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCcccccceEEecCCccC
Confidence 78877777665533 457899999999999988777541 246889999988664
|
| >1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A* | Back alignment and structure |
|---|
Probab=97.81 E-value=6.9e-05 Score=70.16 Aligned_cols=91 Identities=16% Similarity=0.217 Sum_probs=61.4
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEE-ecCCCCCCC------ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeC
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRC-LHIPVYDRT------PFEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~-~D~~G~G~S------s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS 250 (468)
+..||.+||...- ...+ ..++.+.. .|.++.+.- .++.+.+++...++.+..+.+..+++++|||
T Consensus 74 ~~iVva~RGT~~~-------~d~l~d~~~~~~~~~~~~~~~~vh~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~GHS 146 (269)
T 1tib_A 74 KLIVLSFRGSRSI-------ENWIGNLNFDLKEINDICSGCRGHDGFTSSWRSVADTLRQKVEDAVREHPDYRVVFTGHS 146 (269)
T ss_dssp TEEEEEECCCSCT-------HHHHTCCCCCEEECTTTSTTCEEEHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEET
T ss_pred CEEEEEEeCCCCH-------HHHHHhcCeeeeecCCCCCCCEecHHHHHHHHHHHHHHHHHHHHHHHHCCCceEEEecCC
Confidence 5578889999742 2223 22455554 466542211 3566778888888887777778899999999
Q ss_pred hhHHHHHHHHHhCCC---CceEEEEeCCC
Q 012190 251 FGGCLALAVAARNPT---IDLILILSNPA 276 (468)
Q Consensus 251 ~GG~ia~~~a~~~P~---~v~~lVli~p~ 276 (468)
|||++|..+|..... .+..+.+-+|.
T Consensus 147 LGGalA~l~a~~l~~~~~~~~~~tfg~P~ 175 (269)
T 1tib_A 147 LGGALATVAGADLRGNGYDIDVFSYGAPR 175 (269)
T ss_dssp HHHHHHHHHHHHHTTSSSCEEEEEESCCC
T ss_pred hHHHHHHHHHHHHHhcCCCeEEEEeCCCC
Confidence 999999999988643 35555554443
|
| >4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=0.0012 Score=64.63 Aligned_cols=97 Identities=12% Similarity=0.043 Sum_probs=64.5
Q ss_pred eecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecC-----------CCCCC--------C---ChHHHH
Q 012190 168 CPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHI-----------PVYDR--------T---PFEGLV 225 (468)
Q Consensus 168 ~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~-----------~G~G~--------S---s~~~~~ 225 (468)
-|.+.|. ..-|+||.+||... .+..+|.++.++. +|+|. . .+..|+
T Consensus 129 i~lP~g~--~P~Pvii~~~~~~~----------~~~~G~A~i~f~~~~va~d~~~gsrG~g~f~~ly~~~~~~gal~aWA 196 (433)
T 4g4g_A 129 IRKPSGA--GPFPAIIGIGGASI----------PIPSNVATITFNNDEFGAQMGSGSRGQGKFYDLFGRDHSAGSLTAWA 196 (433)
T ss_dssp EECCSSS--CCEEEEEEESCCCS----------CCCTTSEEEEECHHHHSCCSSGGGTTCSHHHHHHCTTCSCCHHHHHH
T ss_pred EECCCCC--CCccEEEEECCCcc----------ccCCCeEEEEeCCcccccccCCCcCCccccccccCCccchHHHHHHH
Confidence 3445543 23467777776321 2577899999885 34441 1 133444
Q ss_pred HHHHHHHHHHhh------cCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 226 KFVEETVRREHA------SSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 226 ~dl~~~i~~~~~------~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
=++..+++.+.. ....++|.++|||+||..|+.+|+.. ++|+.+|..++..
T Consensus 197 Wg~~raiDyL~~~~~~~~~VD~~RIgv~G~S~gG~~Al~aaA~D-~Ri~~vi~~~sg~ 253 (433)
T 4g4g_A 197 WGVDRLIDGLEQVGAQASGIDTKRLGVTGCSRNGKGAFITGALV-DRIALTIPQESGA 253 (433)
T ss_dssp HHHHHHHHHHHHHCHHHHCEEEEEEEEEEETHHHHHHHHHHHHC-TTCSEEEEESCCT
T ss_pred HhHHHHHHHHHhccccCCCcChhHEEEEEeCCCcHHHHHHHhcC-CceEEEEEecCCC
Confidence 456666666544 23457999999999999999999987 5899999988643
|
| >2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... | Back alignment and structure |
|---|
Probab=97.60 E-value=9.6e-05 Score=76.44 Aligned_cols=100 Identities=11% Similarity=0.040 Sum_probs=62.3
Q ss_pred CCCeEEEeCCCC---CchhhHHHhHhhhc--CCeEEEEecCC----CCCC------CChHHHHHHHHHHHHHHhh---cC
Q 012190 178 GSPTLLFLPGID---GLGLGLILHHKPLG--KAFEVRCLHIP----VYDR------TPFEGLVKFVEETVRREHA---SS 239 (468)
Q Consensus 178 ~~p~lV~lHG~~---~s~~~~~~~~~~L~--~~~~V~~~D~~----G~G~------Ss~~~~~~dl~~~i~~~~~---~~ 239 (468)
..|+||++||.+ ++..........|. .++-|+.+++| |++. .....-..|...+++.+.. ..
T Consensus 111 ~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~g~vvv~~nYRlg~~Gf~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~f 190 (543)
T 2ha2_A 111 PTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGNVGLLDQRLALQWVQENIAAF 190 (543)
T ss_dssp CEEEEEEECCSTTTCCCTTSGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCSSCCSCHHHHHHHHHHHHHHHHGGGG
T ss_pred CCeEEEEECCCccccCCCCCCcCChHHHHhcCCEEEEEecccccccccccCCCCCCCCCcccHHHHHHHHHHHHHHHHHh
Confidence 358999999965 33322122334452 57999999999 2222 1222223333334333332 11
Q ss_pred --CCCcEEEEEeChhHHHHHHHHHhC--CCCceEEEEeCCCC
Q 012190 240 --PEKPIYLVGDSFGGCLALAVAARN--PTIDLILILSNPAT 277 (468)
Q Consensus 240 --~~~~i~LvGhS~GG~ia~~~a~~~--P~~v~~lVli~p~~ 277 (468)
...+|.|+|+|.||..++.++... +..++++|+.++..
T Consensus 191 ggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 191 GGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (543)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred CCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCCc
Confidence 235899999999999987766543 46899999998854
|
| >4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A* | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00071 Score=68.54 Aligned_cols=98 Identities=14% Similarity=0.202 Sum_probs=73.7
Q ss_pred CCeEEEeCCCCCchhhHHH---hHhhhcC--CeEEEEecCCCCCCC----------------ChHHHHHHHHHHHHHHhh
Q 012190 179 SPTLLFLPGIDGLGLGLIL---HHKPLGK--AFEVRCLHIPVYDRT----------------PFEGLVKFVEETVRREHA 237 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~---~~~~L~~--~~~V~~~D~~G~G~S----------------s~~~~~~dl~~~i~~~~~ 237 (468)
+|++|++-| -+....+.. ++..+++ +--++.+++|-+|.| +.++...|+..++++++.
T Consensus 43 gPIfl~~gG-Eg~~~~~~~~~g~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~st~~~nL~yLt~eQALaD~a~fi~~~k~ 121 (472)
T 4ebb_A 43 GPIFFYTGN-EGDVWAFANNSAFVAELAAERGALLVFAEHRYYGKSLPFGAQSTQRGHTELLTVEQALADFAELLRALRR 121 (472)
T ss_dssp CCEEEEECC-SSCHHHHHHHCHHHHHHHHHHTCEEEEECCTTSTTCCTTGGGGGSTTSCTTCSHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEECC-CccccccccCccHHHHHHHHhCCeEEEEecccccCCcCCCCCCccccccccCCHHHHHHHHHHHHHHHHh
Confidence 676666654 444432221 2233422 567899999999998 357778889999988876
Q ss_pred cCC--CCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 238 SSP--EKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 238 ~~~--~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
... ..|++++|-|+||++|..+-.++|+.+.|.+..+.+.
T Consensus 122 ~~~~~~~pwI~~GGSY~G~LaAW~R~kYP~lv~ga~ASSApv 163 (472)
T 4ebb_A 122 DLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPV 163 (472)
T ss_dssp HTTCTTCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCT
T ss_pred hcCCCCCCEEEEccCccchhhHHHHhhCCCeEEEEEecccce
Confidence 543 5689999999999999999999999999999987655
|
| >2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00011 Score=76.20 Aligned_cols=99 Identities=16% Similarity=0.157 Sum_probs=62.1
Q ss_pred CCeEEEeCCCC---CchhhHHHhHhhh-cCCeEEEEecCCC----CCC-----CChHHHHHHHHHHHHHHhhc---C--C
Q 012190 179 SPTLLFLPGID---GLGLGLILHHKPL-GKAFEVRCLHIPV----YDR-----TPFEGLVKFVEETVRREHAS---S--P 240 (468)
Q Consensus 179 ~p~lV~lHG~~---~s~~~~~~~~~~L-~~~~~V~~~D~~G----~G~-----Ss~~~~~~dl~~~i~~~~~~---~--~ 240 (468)
.|+||++||.+ ++..........| ..++.|+++++|. +.. .....-..|...+++.+... . .
T Consensus 115 ~Pviv~iHGGg~~~g~~~~~~~~~~~l~~~g~vvv~~nYRl~~~Gf~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggD 194 (551)
T 2fj0_A 115 LPVLVFIHGGGFAFGSGDSDLHGPEYLVSKDVIVITFNYRLNVYGFLSLNSTSVPGNAGLRDMVTLLKWVQRNAHFFGGR 194 (551)
T ss_dssp EEEEEEECCSTTTSCCSCTTTCBCTTGGGGSCEEEEECCCCHHHHHCCCSSSSCCSCHHHHHHHHHHHHHHHHTGGGTEE
T ss_pred CCEEEEEcCCccccCCCcccccCHHHHHhCCeEEEEeCCcCCccccccCcccCCCCchhHHHHHHHHHHHHHHHHHhCCC
Confidence 68999999943 3322222233444 5689999999994 111 11122223333333333221 2 2
Q ss_pred CCcEEEEEeChhHHHHHHHHHh--CCCCceEEEEeCCCC
Q 012190 241 EKPIYLVGDSFGGCLALAVAAR--NPTIDLILILSNPAT 277 (468)
Q Consensus 241 ~~~i~LvGhS~GG~ia~~~a~~--~P~~v~~lVli~p~~ 277 (468)
..+|.|+|+|.||.+++.++.. .+..++++|+.++..
T Consensus 195 p~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 233 (551)
T 2fj0_A 195 PDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGTS 233 (551)
T ss_dssp EEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCT
T ss_pred hhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCCc
Confidence 4579999999999999888765 457899999998864
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=1.8e-05 Score=95.07 Aligned_cols=92 Identities=20% Similarity=0.279 Sum_probs=0.0
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCC-CChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHH
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDR-TPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLAL 257 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~-Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~ 257 (468)
+++++|+|+.+++...|..+.+.|. ..|+++..||... .++++++++..+.++.. .+..|+.|+||||||.+|.
T Consensus 2242 ~~~Lfc~~~agG~~~~y~~l~~~l~--~~v~~lq~pg~~~~~~i~~la~~~~~~i~~~---~p~gpy~L~G~S~Gg~lA~ 2316 (2512)
T 2vz8_A 2242 ERPLFLVHPIEGSITVFHGLAAKLS--IPTYGLQCTGAAPLDSIQSLASYYIECIRQV---QPEGPYRIAGYSYGACVAF 2316 (2512)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCeEEeCCccccHHHHHHHHHhhC--CcEEEEecCCCCCCCCHHHHHHHHHHHHHHh---CCCCCEEEEEECHhHHHHH
Confidence 5689999999999999999988886 7888888888322 25666776666666543 2345899999999999999
Q ss_pred HHHHhCCC---Cce---EEEEeCC
Q 012190 258 AVAARNPT---IDL---ILILSNP 275 (468)
Q Consensus 258 ~~a~~~P~---~v~---~lVli~p 275 (468)
.+|.+..+ .+. .++++++
T Consensus 2317 evA~~L~~~G~~v~~~~~L~llDg 2340 (2512)
T 2vz8_A 2317 EMCSQLQAQQSATPGNHSLFLFDG 2340 (2512)
T ss_dssp ------------------------
T ss_pred HHHHHHHHcCCCCCccceEEEEeC
Confidence 99976432 233 5677765
|
| >1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00082 Score=62.76 Aligned_cols=76 Identities=18% Similarity=0.160 Sum_probs=50.3
Q ss_pred eEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC--------ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChh
Q 012190 181 TLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSPEKPIYLVGDSFG 252 (468)
Q Consensus 181 ~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S--------s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~G 252 (468)
.+++.+-.+.+...|.. ...+...++||+... .+..+.+++.+.++.+....+..+++++|||||
T Consensus 74 ~ivv~frGT~~~~dw~~-------d~~~~~~~~p~~~~~~vh~gf~~~~~~l~~~~~~~l~~~~~~~p~~~i~~~GHSLG 146 (269)
T 1tgl_A 74 TIYIVFRGSSSIRNWIA-------DLTFVPVSYPPVSGTKVHKGFLDSYGEVQNELVATVLDQFKQYPSYKVAVTGHSLG 146 (269)
T ss_pred EEEEEECCCCCHHHHHh-------hCceEeeeCCCCCCCEEcHHHHHHHHHHHHHHHHHHHHHHHHCCCceEEEEeeCHH
Confidence 45555544455445542 455666678874222 355666666666666555556678999999999
Q ss_pred HHHHHHHHHhC
Q 012190 253 GCLALAVAARN 263 (468)
Q Consensus 253 G~ia~~~a~~~ 263 (468)
|.+|..+|...
T Consensus 147 galA~l~a~~l 157 (269)
T 1tgl_A 147 GATALLCALDL 157 (269)
T ss_pred HHHHHHHHHHH
Confidence 99999888765
|
| >1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00057 Score=64.21 Aligned_cols=80 Identities=15% Similarity=0.129 Sum_probs=51.6
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC------ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChh
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT------PFEGLVKFVEETVRREHASSPEKPIYLVGDSFG 252 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S------s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~G 252 (468)
+..||.+||.... ..|. ..+ .+.....|....+.. .+..+.+++.+.++.+..+.+..++++.|||||
T Consensus 74 ~~iVvafRGT~~~-~d~~---~d~--~~~~~~~~~~~~~~vh~Gf~~~~~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLG 147 (279)
T 1tia_A 74 SAVVLAFRGSYSV-RNWV---ADA--TFVHTNPGLCDGCLAELGFWSSWKLVRDDIIKELKEVVAQNPNYELVVVGHSLG 147 (279)
T ss_pred CEEEEEEeCcCCH-HHHH---HhC--CcEeecCCCCCCCccChhHHHHHHHHHHHHHHHHHHHHHHCCCCeEEEEecCHH
Confidence 5588999999753 2222 122 233333343222211 245566677777777666677789999999999
Q ss_pred HHHHHHHHHhCC
Q 012190 253 GCLALAVAARNP 264 (468)
Q Consensus 253 G~ia~~~a~~~P 264 (468)
|++|+.+|....
T Consensus 148 GalA~l~a~~l~ 159 (279)
T 1tia_A 148 AAVATLAATDLR 159 (279)
T ss_pred HHHHHHHHHHHH
Confidence 999998888753
|
| >3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.0025 Score=61.44 Aligned_cols=88 Identities=11% Similarity=0.017 Sum_probs=60.4
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecC-----------CCCCC-----------CChHHHHHHHHHHHHHHh
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHI-----------PVYDR-----------TPFEGLVKFVEETVRREH 236 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~-----------~G~G~-----------Ss~~~~~~dl~~~i~~~~ 236 (468)
-|++|-+||..- .+..+|.++.++. +|+|. ..+..++=++..+++.+.
T Consensus 106 ~Pvii~i~~~~~----------~~~~G~a~~~~~~~~v~~~~~~gs~g~g~f~~ly~~~~~~gal~awaWg~~raid~L~ 175 (375)
T 3pic_A 106 YPAIIGYGGGSL----------PAPAGVAMINFNNDNIAAQVNTGSRGQGKFYDLYGSSHSAGAMTAWAWGVSRVIDALE 175 (375)
T ss_dssp EEEEEEETTCSS----------CCCTTCEEEEECHHHHSCCSSGGGTTCSHHHHHHCTTCSCCHHHHHHHHHHHHHHHHH
T ss_pred ccEEEEECCCcc----------ccCCCeEEEEecccccccccCCCCccceecccccCCccchHHHHHHHHHHHHHHHHHH
Confidence 456777887321 1467888888864 24441 023444556666777665
Q ss_pred hc----CCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 237 AS----SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 237 ~~----~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
.. ...++|.++|||+||..|+.+|+.. ++|+.+|..++..
T Consensus 176 ~~~~~~VD~~RIgv~G~S~gG~~al~~aA~D-~Ri~~~v~~~~g~ 219 (375)
T 3pic_A 176 LVPGARIDTTKIGVTGCSRNGKGAMVAGAFE-KRIVLTLPQESGA 219 (375)
T ss_dssp HCGGGCEEEEEEEEEEETHHHHHHHHHHHHC-TTEEEEEEESCCT
T ss_pred hCCccCcChhhEEEEEeCCccHHHHHHHhcC-CceEEEEeccCCC
Confidence 43 2346899999999999999999987 5899999987643
|
| >1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00019 Score=73.97 Aligned_cols=100 Identities=14% Similarity=0.050 Sum_probs=62.1
Q ss_pred CCCeEEEeCCCC---CchhhHHHhHhhhc--CCeEEEEecCC----CCCCC------ChHHHHHHHHHHHHHHhh---cC
Q 012190 178 GSPTLLFLPGID---GLGLGLILHHKPLG--KAFEVRCLHIP----VYDRT------PFEGLVKFVEETVRREHA---SS 239 (468)
Q Consensus 178 ~~p~lV~lHG~~---~s~~~~~~~~~~L~--~~~~V~~~D~~----G~G~S------s~~~~~~dl~~~i~~~~~---~~ 239 (468)
+.|+||++||.+ ++..........|. .++-|+++++| |++.+ ....-..|...+++.+.. ..
T Consensus 106 ~~Pv~v~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~f 185 (529)
T 1p0i_A 106 NATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPEAPGNMGLFDQQLALQWVQKNIAAF 185 (529)
T ss_dssp SEEEEEEECCSTTTSCCTTCGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCTTSCSCHHHHHHHHHHHHHHHHGGGG
T ss_pred CCeEEEEECCCccccCCCCccccChHHHhccCCeEEEEecccccccccccCCCCCCCcCcccHHHHHHHHHHHHHHHHHh
Confidence 468999999964 33322222234452 47999999999 32221 222223333333333221 12
Q ss_pred C--CCcEEEEEeChhHHHHHHHHHhC--CCCceEEEEeCCCC
Q 012190 240 P--EKPIYLVGDSFGGCLALAVAARN--PTIDLILILSNPAT 277 (468)
Q Consensus 240 ~--~~~i~LvGhS~GG~ia~~~a~~~--P~~v~~lVli~p~~ 277 (468)
+ ..+|.|+|+|.||..+..++... +..++++|+.++..
T Consensus 186 ggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 227 (529)
T 1p0i_A 186 GGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSF 227 (529)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCT
T ss_pred CCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCcc
Confidence 2 35799999999999998777653 45799999999865
|
| >1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00036 Score=71.77 Aligned_cols=100 Identities=10% Similarity=-0.028 Sum_probs=62.7
Q ss_pred CCCeEEEeCCCCCch---hhHH--HhHhhhcCCeEEEEecCC----CCCCC-------ChHHHHHHHHHHHHHHhhc---
Q 012190 178 GSPTLLFLPGIDGLG---LGLI--LHHKPLGKAFEVRCLHIP----VYDRT-------PFEGLVKFVEETVRREHAS--- 238 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~---~~~~--~~~~~L~~~~~V~~~D~~----G~G~S-------s~~~~~~dl~~~i~~~~~~--- 238 (468)
..|+||++||.+... ..+. .++.....++.|+++++| |++.+ +...-..|....++.+...
T Consensus 101 ~~Pviv~iHGGg~~~g~~~~~~~~~~~~~~~~g~vvv~~nYRlg~~Gf~~~~~~~~~~~~n~gl~D~~~al~wv~~ni~~ 180 (522)
T 1ukc_A 101 KLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNGDLNAGLLDQRKALRWVKQYIEQ 180 (522)
T ss_dssp CEEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHHSSCTTHHHHHHHHHHHHHHHHGGG
T ss_pred CCCEEEEECCCccccCCccccCcHHHHHhcCCcEEEEEecccccccccccchhccccCCCChhHHHHHHHHHHHHHHHHH
Confidence 468999999975322 1221 122222458999999999 44433 1233344444444444321
Q ss_pred C--CCCcEEEEEeChhHHHHHHHHHhC----CCCceEEEEeCCCC
Q 012190 239 S--PEKPIYLVGDSFGGCLALAVAARN----PTIDLILILSNPAT 277 (468)
Q Consensus 239 ~--~~~~i~LvGhS~GG~ia~~~a~~~----P~~v~~lVli~p~~ 277 (468)
. ...+|.|+|+|.||..+...+... +..+.++|+.++..
T Consensus 181 fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~ 225 (522)
T 1ukc_A 181 FGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFW 225 (522)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCC
T ss_pred cCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCc
Confidence 1 235899999999997766555443 57899999998865
|
| >1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00043 Score=71.44 Aligned_cols=100 Identities=14% Similarity=0.062 Sum_probs=61.6
Q ss_pred CCCeEEEeCCCC---CchhhHHHhHhhh--cCCeEEEEecCC----CCCCC------ChHHHHHHHHHHHHHHhh---cC
Q 012190 178 GSPTLLFLPGID---GLGLGLILHHKPL--GKAFEVRCLHIP----VYDRT------PFEGLVKFVEETVRREHA---SS 239 (468)
Q Consensus 178 ~~p~lV~lHG~~---~s~~~~~~~~~~L--~~~~~V~~~D~~----G~G~S------s~~~~~~dl~~~i~~~~~---~~ 239 (468)
+.|+||++||.+ ++..........| ..++-|+++++| |+..+ ....-..|...+++.+.. ..
T Consensus 108 ~~Pv~v~iHGG~~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~n~gl~D~~~al~wv~~ni~~f 187 (537)
T 1ea5_A 108 STTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAPGNVGLLDQRMALQWVHDNIQFF 187 (537)
T ss_dssp SEEEEEEECCSTTTCCCTTCGGGCTHHHHHHHTCEEEECCCCCHHHHHCCCTTCSSSCSCHHHHHHHHHHHHHHHHGGGG
T ss_pred CCeEEEEECCCcccCCCCCCCccChHHHHhcCCEEEEEeccCccccccccCCCCCCCcCccccHHHHHHHHHHHHHHHHh
Confidence 478999999954 3332211223444 357999999999 22221 222223333333333322 11
Q ss_pred --CCCcEEEEEeChhHHHHHHHHHh--CCCCceEEEEeCCCC
Q 012190 240 --PEKPIYLVGDSFGGCLALAVAAR--NPTIDLILILSNPAT 277 (468)
Q Consensus 240 --~~~~i~LvGhS~GG~ia~~~a~~--~P~~v~~lVli~p~~ 277 (468)
...+|.|+|+|.||..+..++.. .+..++++|+.++..
T Consensus 188 ggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 229 (537)
T 1ea5_A 188 GGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSP 229 (537)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCT
T ss_pred CCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCc
Confidence 23589999999999998877654 246899999999865
|
| >2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00022 Score=73.70 Aligned_cols=97 Identities=14% Similarity=0.061 Sum_probs=61.5
Q ss_pred CCCeEEEeCCCC---CchhhHHHhHhhh--cCCeEEEEecCC----CCCCC-----C----hHHHHHHHHHHHHHHhhcC
Q 012190 178 GSPTLLFLPGID---GLGLGLILHHKPL--GKAFEVRCLHIP----VYDRT-----P----FEGLVKFVEETVRREHASS 239 (468)
Q Consensus 178 ~~p~lV~lHG~~---~s~~~~~~~~~~L--~~~~~V~~~D~~----G~G~S-----s----~~~~~~dl~~~i~~~~~~~ 239 (468)
+.|+||++||.+ ++...|.. ..| ..++-|+.+++| |++.+ . +.|....+..+.+.. ...
T Consensus 114 ~~Pv~v~iHGG~~~~g~~~~~~~--~~la~~~g~vvv~~nYRlg~~gf~~~~~~~~~~n~gl~D~~~al~wv~~ni-~~f 190 (542)
T 2h7c_A 114 RLPVMVWIHGGGLMVGAASTYDG--LALAAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQVAALRWVQDNI-ASF 190 (542)
T ss_dssp CEEEEEEECCSTTTSCCSTTSCC--HHHHHHHTCEEEEECCCCHHHHHCCCSSTTCCCCHHHHHHHHHHHHHHHHG-GGG
T ss_pred CCCEEEEECCCcccCCCccccCH--HHHHhcCCEEEEecCCCCccccCCCCCcccCccchhHHHHHHHHHHHHHHH-HHc
Confidence 468999999954 33322221 223 257999999999 44322 1 333333332222221 111
Q ss_pred --CCCcEEEEEeChhHHHHHHHHHh--CCCCceEEEEeCCCC
Q 012190 240 --PEKPIYLVGDSFGGCLALAVAAR--NPTIDLILILSNPAT 277 (468)
Q Consensus 240 --~~~~i~LvGhS~GG~ia~~~a~~--~P~~v~~lVli~p~~ 277 (468)
...+|.|+|||.||..+..++.. .+..++++|+.++..
T Consensus 191 ggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~ 232 (542)
T 2h7c_A 191 GGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVA 232 (542)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCT
T ss_pred CCCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCc
Confidence 23589999999999999888776 367899999998865
|
| >3hc7_A Gene 12 protein, GP12; alpha/beta sandwich, cell adhesion; 2.00A {Mycobacterium phage D29} | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0037 Score=57.26 Aligned_cols=100 Identities=12% Similarity=-0.003 Sum_probs=70.8
Q ss_pred CCCeEEEeCCCCCchh----hHHHhHhhhcCCeEEEEec-CCCCCCC---ChHHHHHHHHHHHHHHhhcCCCCcEEEEEe
Q 012190 178 GSPTLLFLPGIDGLGL----GLILHHKPLGKAFEVRCLH-IPVYDRT---PFEGLVKFVEETVRREHASSPEKPIYLVGD 249 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~----~~~~~~~~L~~~~~V~~~D-~~G~G~S---s~~~~~~dl~~~i~~~~~~~~~~~i~LvGh 249 (468)
++|+|++.||.+.... ....+...|...+.+-.++ +|-.... +..+-++++...++....+.++.+++|+|+
T Consensus 2 ~~p~ii~ARGT~e~~~~GpG~~~~la~~l~~~~~~q~Vg~YpA~~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkiVL~GY 81 (254)
T 3hc7_A 2 SKPWLFTVHGTGQPDPLGPGLPADTARDVLDIYRWQPIGNYPAAAFPMWPSVEKGVAELILQIELKLDADPYADFAMAGY 81 (254)
T ss_dssp CCCEEEEECCTTCCCTTSSSHHHHHHTTSTTTSEEEECCSCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEE
T ss_pred CCCEEEEECCCCCCCCCCCCcHHHHHHHHHHhcCCCccccccCcccCccchHHHHHHHHHHHHHHHHhhCCCCeEEEEee
Confidence 4789999999977522 2456777776666666664 7765432 334555666666666666688899999999
Q ss_pred ChhHHHHHHHHHh-----------CCCCceEEEEeCCCC
Q 012190 250 SFGGCLALAVAAR-----------NPTIDLILILSNPAT 277 (468)
Q Consensus 250 S~GG~ia~~~a~~-----------~P~~v~~lVli~p~~ 277 (468)
|.||.++-.++.. ..++|.++++.+-+.
T Consensus 82 SQGA~V~~~~l~~~i~~~~g~~~~~~~~V~avvlfGdP~ 120 (254)
T 3hc7_A 82 SQGAIVVGQVLKHHILPPTGRLHRFLHRLKKVIFWGNPM 120 (254)
T ss_dssp THHHHHHHHHHHHHTSSTTCTTGGGGGGEEEEEEESCTT
T ss_pred CchHHHHHHHHHhhccCCCCCchhhhhhEEEEEEEeCCC
Confidence 9999999877755 235788888876544
|
| >1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0026 Score=65.44 Aligned_cols=100 Identities=15% Similarity=0.046 Sum_probs=60.8
Q ss_pred CCCeEEEeCCCCC---chhhHH--HhH-hhh--cCCeEEEEecCCC----CCCC-------ChHHHHHHHHHHHHHHhhc
Q 012190 178 GSPTLLFLPGIDG---LGLGLI--LHH-KPL--GKAFEVRCLHIPV----YDRT-------PFEGLVKFVEETVRREHAS 238 (468)
Q Consensus 178 ~~p~lV~lHG~~~---s~~~~~--~~~-~~L--~~~~~V~~~D~~G----~G~S-------s~~~~~~dl~~~i~~~~~~ 238 (468)
..|+||++||.+. +...+. .++ ..+ ..++-|+.+++|. +..+ ....-..|...+++.+...
T Consensus 113 ~~Pv~v~iHGGg~~~g~~~~~~~~~l~~~~~~~~~~~vvv~~nYRl~~~gf~~~~~~~~~~~~n~gl~D~~~Al~wv~~n 192 (534)
T 1llf_A 113 NLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGSGNAGLKDQRLGMQWVADN 192 (534)
T ss_dssp CEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEeCCCcccCCCcccCchHHHHHHHhcCCCEEEEEeCCCCCCCCCCCcccccccCCCchhHHHHHHHHHHHHHH
Confidence 4689999999753 222221 122 223 3579999999993 2111 1122334444444443321
Q ss_pred ---C--CCCcEEEEEeChhHHHHHHHHHhC--------CCCceEEEEeCCCC
Q 012190 239 ---S--PEKPIYLVGDSFGGCLALAVAARN--------PTIDLILILSNPAT 277 (468)
Q Consensus 239 ---~--~~~~i~LvGhS~GG~ia~~~a~~~--------P~~v~~lVli~p~~ 277 (468)
. ...+|.|+|+|.||..+...+... +..++++|+.++..
T Consensus 193 i~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~~ 244 (534)
T 1llf_A 193 IAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAM 244 (534)
T ss_dssp GGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCCS
T ss_pred HHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccCc
Confidence 1 235899999999998776655543 56789999998754
|
| >4az3_A Lysosomal protective protein 32 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_A* | Back alignment and structure |
|---|
Probab=97.02 E-value=0.013 Score=54.93 Aligned_cols=102 Identities=19% Similarity=0.102 Sum_probs=72.8
Q ss_pred CCCCCeEEEeCCCCCchhhHHHhHhhh-------------------cCCeEEEEecCC-CCCCC---------ChHHHHH
Q 012190 176 LKGSPTLLFLPGIDGLGLGLILHHKPL-------------------GKAFEVRCLHIP-VYDRT---------PFEGLVK 226 (468)
Q Consensus 176 ~~~~p~lV~lHG~~~s~~~~~~~~~~L-------------------~~~~~V~~~D~~-G~G~S---------s~~~~~~ 226 (468)
..+.|++|.+.|.+|++..+..+. ++ .+..+++-+|.| |-|.| +..+.++
T Consensus 47 p~~~Pl~lWlnGGPGcSS~~g~~~-E~GP~~~~~~~~~l~~N~~sW~~~an~lfiD~PvGtGfSy~~~~~~~~~~~~~a~ 125 (300)
T 4az3_A 47 PENSPVVLWLNGGPGCSSLDGLLT-EHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAGVGFSYSDDKFYATNDTEVAQ 125 (300)
T ss_dssp TTTSCEEEEECCTTTBCTHHHHHH-TTSSEEECTTSSCEEECTTCGGGSSEEEEECCSTTSTTCEETTCCCCCBHHHHHH
T ss_pred CCCCCEEEEECCCCcHHHHHHHHh-cCCCceecCCCccccccCccHHhhhcchhhcCCCcccccccCCCcccccchhhHH
Confidence 356899999999998887664332 21 134688999987 67766 3456677
Q ss_pred HHHHHHHHHhhcC---CCCcEEEEEeChhHHHHHHHHHh----CCCCceEEEEeCCCCC
Q 012190 227 FVEETVRREHASS---PEKPIYLVGDSFGGCLALAVAAR----NPTIDLILILSNPATS 278 (468)
Q Consensus 227 dl~~~i~~~~~~~---~~~~i~LvGhS~GG~ia~~~a~~----~P~~v~~lVli~p~~~ 278 (468)
++..+++...... ...+++|.|.|+||..+-.+|.. ..-.++|+++-++...
T Consensus 126 d~~~fl~~f~~~fp~~~~~~~yi~GESY~G~yvP~~a~~i~~~~~inLkG~~iGNg~~d 184 (300)
T 4az3_A 126 SNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGLSS 184 (300)
T ss_dssp HHHHHHHHHHHHCGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCCSB
T ss_pred HHHHHHHHHHHhChhhcCCceEEEecCCceeeHHHHHHHHHhCCCcccccceecCCccC
Confidence 7776666544433 36799999999999998888764 2335789998887653
|
| >1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0012 Score=68.78 Aligned_cols=100 Identities=14% Similarity=0.043 Sum_probs=61.5
Q ss_pred CCCeEEEeCCCC---CchhhHHHhHhhhc--CCeEEEEecCC----CCCCC------------ChHHHHHHHHHHHHHHh
Q 012190 178 GSPTLLFLPGID---GLGLGLILHHKPLG--KAFEVRCLHIP----VYDRT------------PFEGLVKFVEETVRREH 236 (468)
Q Consensus 178 ~~p~lV~lHG~~---~s~~~~~~~~~~L~--~~~~V~~~D~~----G~G~S------------s~~~~~~dl~~~i~~~~ 236 (468)
..|+||++||.+ ++..........|. .++-|+.+++| |+... ....-..|...+++.+.
T Consensus 140 ~~PV~v~iHGGg~~~g~~~~~~~~~~~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~gl~D~~~al~wv~ 219 (585)
T 1dx4_A 140 GLPILIWIYGGGFMTGSATLDIYNADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIRWLK 219 (585)
T ss_dssp SEEEEEEECCSTTTCCCTTCGGGCCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcccCCCCCCCCCCchhhhccCCEEEEEecccccchhhcccccccccccCCCCCCcccHHHHHHHHHHHH
Confidence 468999999964 33322222234442 47999999999 32211 11222334444444443
Q ss_pred hc---C--CCCcEEEEEeChhHHHHHHHHHhC--CCCceEEEEeCCCC
Q 012190 237 AS---S--PEKPIYLVGDSFGGCLALAVAARN--PTIDLILILSNPAT 277 (468)
Q Consensus 237 ~~---~--~~~~i~LvGhS~GG~ia~~~a~~~--P~~v~~lVli~p~~ 277 (468)
.. . ...+|.|+|+|.||..+..++... ...++++|+.++..
T Consensus 220 ~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 220 DNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 267 (585)
T ss_dssp HSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred HHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhcccc
Confidence 22 1 235899999999999887666542 36799999998754
|
| >1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0017 Score=67.00 Aligned_cols=100 Identities=8% Similarity=0.037 Sum_probs=60.7
Q ss_pred CCCeEEEeCCCCCc---hhhH--HHhH-hhh--cCCeEEEEecCCC----CCCC-------ChHHHHHHHHHHHHHHhhc
Q 012190 178 GSPTLLFLPGIDGL---GLGL--ILHH-KPL--GKAFEVRCLHIPV----YDRT-------PFEGLVKFVEETVRREHAS 238 (468)
Q Consensus 178 ~~p~lV~lHG~~~s---~~~~--~~~~-~~L--~~~~~V~~~D~~G----~G~S-------s~~~~~~dl~~~i~~~~~~ 238 (468)
..|+||++||.+.. ...+ ..++ +.+ ..++-|+.+++|. +..+ ....-..|....++.+...
T Consensus 121 ~~Pviv~iHGGg~~~g~~~~~~~~~l~~~~l~~~~~~vvv~~nYRl~~~gf~~~~~~~~~~~~n~gl~D~~~Al~wv~~n 200 (544)
T 1thg_A 121 KLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAEGNTNAGLHDQRKGLEWVSDN 200 (544)
T ss_dssp CEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCccccCCccccCchHHHHHHhhcCCCEEEEeCCCCCCcccCCCcccccccCCCchhHHHHHHHHHHHHHH
Confidence 46899999996532 2222 1122 223 3469999999994 2211 1112233444444333321
Q ss_pred ---C--CCCcEEEEEeChhHHHHHHHHHhC--------CCCceEEEEeCCCC
Q 012190 239 ---S--PEKPIYLVGDSFGGCLALAVAARN--------PTIDLILILSNPAT 277 (468)
Q Consensus 239 ---~--~~~~i~LvGhS~GG~ia~~~a~~~--------P~~v~~lVli~p~~ 277 (468)
. ...+|.|+|+|.||..++.++... +..++++|+.++..
T Consensus 201 i~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~~ 252 (544)
T 1thg_A 201 IANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp GGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCC
T ss_pred HHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEecccc
Confidence 1 235899999999999887766642 46789999998754
|
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* | Back alignment and structure |
|---|
Probab=96.87 E-value=0.01 Score=58.86 Aligned_cols=102 Identities=17% Similarity=0.071 Sum_probs=72.6
Q ss_pred CCCCeEEEeCCCCCchhhHHHhH---h--------------hhcCCeEEEEecC-CCCCCC--------ChHHHHHHHHH
Q 012190 177 KGSPTLLFLPGIDGLGLGLILHH---K--------------PLGKAFEVRCLHI-PVYDRT--------PFEGLVKFVEE 230 (468)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~~~~~---~--------------~L~~~~~V~~~D~-~G~G~S--------s~~~~~~dl~~ 230 (468)
.+.|++|.++|.+|++..+..+. + .+.+..+++-+|. .|.|.| +.++.++++.+
T Consensus 42 ~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~~~~~~~l~~n~~sW~~~an~lfiDqPvGtGfSy~~~~~~~~~~~~a~~~~~ 121 (421)
T 1cpy_A 42 AKDPVILWLNGGPGCSSLTGLFFALGPSSIGPDLKPIGNPYSWNSNATVIFLDQPVNVGFSYSGSSGVSNTVAAGKDVYN 121 (421)
T ss_dssp TTSCEEEEECCTTTBCTHHHHTTTTSSEEEETTTEEEECTTCGGGGSEEECCCCSTTSTTCEESSCCCCSSHHHHHHHHH
T ss_pred CCCCEEEEECCCCchHhHHHHHHccCCcEECCCCceeECCcccccccCEEEecCCCcccccCCCCCCCCChHHHHHHHHH
Confidence 56899999999999877653321 0 1123467888996 478876 24567778777
Q ss_pred HHHHHhhcCC---C--CcEEEEEeChhHHHHHHHHHhC------CCCceEEEEeCCCCC
Q 012190 231 TVRREHASSP---E--KPIYLVGDSFGGCLALAVAARN------PTIDLILILSNPATS 278 (468)
Q Consensus 231 ~i~~~~~~~~---~--~~i~LvGhS~GG~ia~~~a~~~------P~~v~~lVli~p~~~ 278 (468)
+++......+ . .+++|.|+|+||..+..+|..- +-.++|+++-++...
T Consensus 122 fl~~~~~~~p~~~~~~~~~yi~GESY~G~y~p~~a~~i~~~n~~~inLkGi~IGNg~~d 180 (421)
T 1cpy_A 122 FLELFFDQFPEYVNKGQDFHIAGASYAGHYIPVFASEILSHKDRNFNLTSVLIGNGLTD 180 (421)
T ss_dssp HHHHHHHHCTTSTTTTCCEEEEEETTHHHHHHHHHHHHTTCSSCSSCCCEEEEESCCCC
T ss_pred HHHHHHHhCHHhcccCCCEEEEeecccccccHHHHHHHHhccccccceeeEEecCcccC
Confidence 7776655443 3 6999999999999988777542 235789988887663
|
| >1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A {Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0025 Score=59.37 Aligned_cols=77 Identities=17% Similarity=0.183 Sum_probs=50.5
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC--------ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeC
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S--------s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS 250 (468)
+..||.++|... ...|.. .+.- ...++++.... .+..+.+++...++.+....+..++++.|||
T Consensus 74 ~~ivvafRGT~~-~~d~~~---d~~~----~~~~~~~~~~~~vh~Gf~~~~~~~~~~~~~~l~~~~~~~~~~~i~vtGHS 145 (269)
T 1lgy_A 74 KTIYLVFRGTNS-FRSAIT---DIVF----NFSDYKPVKGAKVHAGFLSSYEQVVNDYFPVVQEQLTAHPTYKVIVTGHS 145 (269)
T ss_dssp TEEEEEEECCSC-CHHHHH---TCCC----CEEECTTSTTCEEEHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEET
T ss_pred CEEEEEEeCCCc-HHHHHh---hcCc----ccccCCCCCCcEeeeehhhhHHHHHHHHHHHHHHHHHHCCCCeEEEeccC
Confidence 457888999943 334432 2211 12344443221 2556667777777777666778899999999
Q ss_pred hhHHHHHHHHHhC
Q 012190 251 FGGCLALAVAARN 263 (468)
Q Consensus 251 ~GG~ia~~~a~~~ 263 (468)
|||++|..+|...
T Consensus 146 LGGalA~l~a~~~ 158 (269)
T 1lgy_A 146 LGGAQALLAGMDL 158 (269)
T ss_dssp HHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHH
Confidence 9999999888765
|
| >1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=96.72 E-value=0.015 Score=53.84 Aligned_cols=101 Identities=15% Similarity=0.056 Sum_probs=66.3
Q ss_pred CCCCeEEEeCCCCCchhhH-HHhHh-----------h-------hcCCeEEEEecC-CCCCCC----------ChHHHHH
Q 012190 177 KGSPTLLFLPGIDGLGLGL-ILHHK-----------P-------LGKAFEVRCLHI-PVYDRT----------PFEGLVK 226 (468)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~-~~~~~-----------~-------L~~~~~V~~~D~-~G~G~S----------s~~~~~~ 226 (468)
.+.|++|.++|.+|++..+ ..+.+ . +.+..+++-+|. .|.|.| +-++.++
T Consensus 52 ~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~SW~~~anllfiDqPvGtGfSy~~~~~~~~~~d~~~a~ 131 (270)
T 1gxs_A 52 AAAPLVLWLNGGPGCSSIGLGAMQELGAFRVHTNGESLLLNEYAWNKAANILFAESPAGVGFSYSNTSSDLSMGDDKMAQ 131 (270)
T ss_dssp GGSCEEEEEECTTTBCTTTTHHHHTTSSEEECTTSSCEEECTTCGGGTSEEEEECCSTTSTTCEESSGGGGCCCHHHHHH
T ss_pred CCCCEEEEecCCCcccchhhhhHHhccCceecCCCCcceeCccchhccccEEEEeccccccccCCCCCccccCCcHHHHH
Confidence 4689999999999888764 32220 1 123578999996 588877 2345577
Q ss_pred HHHHHHHHHhhcC---CCCcEEEEEeChhHHHHH---HHHHhC----CCCceEEEEeCCCCC
Q 012190 227 FVEETVRREHASS---PEKPIYLVGDSFGGCLAL---AVAARN----PTIDLILILSNPATS 278 (468)
Q Consensus 227 dl~~~i~~~~~~~---~~~~i~LvGhS~GG~ia~---~~a~~~----P~~v~~lVli~p~~~ 278 (468)
++.++++...... ...+++|.|+| |-.+.. .+...+ .-.++|+++.+|...
T Consensus 132 d~~~fl~~f~~~fp~~~~~~~yi~GES-G~yvP~la~~i~~~n~~~~~inLkGi~ign~~~d 192 (270)
T 1gxs_A 132 DTYTFLVKWFERFPHYNYREFYIAGES-GHFIPQLSQVVYRNRNNSPFINFQGLLVSSGLTN 192 (270)
T ss_dssp HHHHHHHHHHHHCGGGTTSEEEEEEEC-TTHHHHHHHHHHHTTTTCTTCEEEEEEEESCCCB
T ss_pred HHHHHHHHHHHhChhhcCCCEEEEeCC-CcchHHHHHHHHhccccccceeeeeEEEeCCccC
Confidence 7777776655533 35689999999 644332 222222 135789999998664
|
| >2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0041 Score=64.56 Aligned_cols=99 Identities=14% Similarity=0.041 Sum_probs=59.7
Q ss_pred CCCeEEEeCCCCCchhhH---------HHhHhhh--cCCeEEEEecCC----CCCCC---------ChHHHHHHHHHHHH
Q 012190 178 GSPTLLFLPGIDGLGLGL---------ILHHKPL--GKAFEVRCLHIP----VYDRT---------PFEGLVKFVEETVR 233 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~---------~~~~~~L--~~~~~V~~~D~~----G~G~S---------s~~~~~~dl~~~i~ 233 (468)
+.|+||++||.+.....- ......| ..++-|+.+++| |+..+ .+.|....+..+.+
T Consensus 97 ~~PV~v~iHGGg~~~Gs~~~~~~~~~~~~~~~~la~~~~vvvV~~nYRLg~~Gfl~~~~~~~pgn~gl~D~~~Al~wv~~ 176 (579)
T 2bce_A 97 DLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDSNLPGNYGLWDQHMAIAWVKR 176 (579)
T ss_dssp SEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCCSSTTCCCCHHHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCcccCCCCCccccccccccChHHHhcCCCEEEEEeCCccccccCCcCCCCCCCCccchHHHHHHHHHHHH
Confidence 468999999975322111 1112334 236899999999 43222 13444333333322
Q ss_pred HHhhcC--CCCcEEEEEeChhHHHHHHHHHh--CCCCceEEEEeCCCC
Q 012190 234 REHASS--PEKPIYLVGDSFGGCLALAVAAR--NPTIDLILILSNPAT 277 (468)
Q Consensus 234 ~~~~~~--~~~~i~LvGhS~GG~ia~~~a~~--~P~~v~~lVli~p~~ 277 (468)
.. ... ...+|.|+|+|.||..+..++.. ....++++|+.++..
T Consensus 177 ni-~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~~ 223 (579)
T 2bce_A 177 NI-EAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGVG 223 (579)
T ss_dssp HG-GGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCCT
T ss_pred HH-HHhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcCCc
Confidence 22 122 23589999999999998877654 356889999987643
|
| >3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0049 Score=64.01 Aligned_cols=97 Identities=13% Similarity=0.065 Sum_probs=59.0
Q ss_pred CCCeEEEeCCCC---CchhhHHHhHhhh-c-CCeEEEEecCC----CCCC-----CC----hHHHHHHHHHHHHHHhhc-
Q 012190 178 GSPTLLFLPGID---GLGLGLILHHKPL-G-KAFEVRCLHIP----VYDR-----TP----FEGLVKFVEETVRREHAS- 238 (468)
Q Consensus 178 ~~p~lV~lHG~~---~s~~~~~~~~~~L-~-~~~~V~~~D~~----G~G~-----Ss----~~~~~~dl~~~i~~~~~~- 238 (468)
..|+||++||.+ ++...+.. ..| . .++-|+++++| |+.. .. +.|....+..+.+....-
T Consensus 130 ~~Pv~v~iHGGg~~~g~~~~~~~--~~la~~~~~vvv~~~YRl~~~Gfl~~~~~~~~~n~gl~D~~~al~wv~~ni~~fg 207 (574)
T 3bix_A 130 PKPVMVYIHGGSYMEGTGNLYDG--SVLASYGNVIVITVNYRLGVLGFLSTGDQAAKGNYGLLDLIQALRWTSENIGFFG 207 (574)
T ss_dssp CEEEEEECCCSSSSSCCGGGSCC--HHHHHHHTCEEEEECCCCHHHHHCCCSSSSCCCCHHHHHHHHHHHHHHHHGGGGT
T ss_pred CCcEEEEECCCcccCCCCCccCc--hhhhccCCEEEEEeCCcCcccccCcCCCCCCCCcccHHHHHHHHHHHHHHHHHhC
Confidence 368999999964 23332221 334 2 25899999998 2211 12 344444333333322111
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHhCC---CCceEEEEeCCC
Q 012190 239 SPEKPIYLVGDSFGGCLALAVAARNP---TIDLILILSNPA 276 (468)
Q Consensus 239 ~~~~~i~LvGhS~GG~ia~~~a~~~P---~~v~~lVli~p~ 276 (468)
....+|.|+|+|.||..+..++.... ..+.++|+.++.
T Consensus 208 gdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg~ 248 (574)
T 3bix_A 208 GDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSGT 248 (574)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESCC
T ss_pred CCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcCC
Confidence 12357999999999999988776543 468888988764
|
| >1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A* | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0052 Score=56.97 Aligned_cols=54 Identities=20% Similarity=0.231 Sum_probs=38.1
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhC---CCCceEEEEeCC
Q 012190 221 FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARN---PTIDLILILSNP 275 (468)
Q Consensus 221 ~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~---P~~v~~lVli~p 275 (468)
+..+.+++.+.++.+..+.+..++++.||||||++|..+|... ...+. ++..++
T Consensus 104 ~~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l~~~~~~v~-~~tFg~ 160 (261)
T 1uwc_A 104 WISVQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQLSATYDNVR-LYTFGE 160 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHTTCSSEE-EEEESC
T ss_pred HHHHHHHHHHHHHHHHHHCCCceEEEEecCHHHHHHHHHHHHHhccCCCeE-EEEecC
Confidence 4445566667777766667788999999999999999888763 23455 444443
|
| >1whs_B Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1wht_B* 1bcs_B* 1bcr_B* 3sc2_B* | Back alignment and structure |
|---|
Probab=96.29 E-value=0.0071 Score=51.08 Aligned_cols=59 Identities=14% Similarity=0.241 Sum_probs=51.6
Q ss_pred CceEEEEEeCCCCCCCcHHHHHHHHHhCC------------------------CcEEEEeCCCCccccccCcHHHHHHHH
Q 012190 379 KAEVLVLASGKDNMLPSEDEAKRLNNSLQ------------------------NCIVRNFKDNGHTLLLEEGISLLTIIK 434 (468)
Q Consensus 379 ~~PvLlI~G~~D~~v~~~~~~~~l~~~l~------------------------~~~~~~i~~aGH~~~~e~p~~~~~~I~ 434 (468)
..++|+.+|+.|-+++.. ..+...+.+. +.+++.+.+|||++..++|+...+.+.
T Consensus 64 girvlIy~Gd~D~i~~~~-Gt~~~i~~L~w~~~~~~~~w~~~~~vaG~~~~~~~Ltf~~V~~AGHmVP~dqP~~a~~m~~ 142 (153)
T 1whs_B 64 GLRIWVFSGDTDAVVPLT-ATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSVRGAGHEVPLHRPRQALVLFQ 142 (153)
T ss_dssp TCEEEEEEETTCSSSCHH-HHHHHHHTTTCCEEEEEEEEEETTEEEEEEEEETTEEEEEETTCCSSHHHHSHHHHHHHHH
T ss_pred CceEEEEecCcCcccccH-hHHHHHHhCCCCCcccccceeECCCccEEEEEeCeEEEEEECCCcccCcccCHHHHHHHHH
Confidence 679999999999999998 6888877774 578889999999999999999999999
Q ss_pred hcCccc
Q 012190 435 GTCKYR 440 (468)
Q Consensus 435 ~~~F~~ 440 (468)
.|+.
T Consensus 143 --~fl~ 146 (153)
T 1whs_B 143 --YFLQ 146 (153)
T ss_dssp --HHHH
T ss_pred --HHHC
Confidence 4444
|
| >3qpa_A Cutinase; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted; HET: MIR; 0.85A {Nectria haematococca} PDB: 3qpc_A* 1cex_A 1oxm_A* 1cui_A 1cus_A 2cut_A 1cuj_A 1cuy_A 1xzl_A* 1xzk_A* 1xzm_A* 1cuh_A 1cuu_A 3esc_A* 1cua_A* 3esa_A* 3esb_A* 3ef3_A* 3esd_A* 1cux_A ... | Back alignment and structure |
|---|
Probab=96.21 E-value=0.064 Score=46.94 Aligned_cols=97 Identities=9% Similarity=0.044 Sum_probs=65.5
Q ss_pred eEEEeCCCCCch------hhH-HHhHhhh-cCCeEEEEe--cCCCCCC------CChHHHHHHHHHHHHHHhhcCCCCcE
Q 012190 181 TLLFLPGIDGLG------LGL-ILHHKPL-GKAFEVRCL--HIPVYDR------TPFEGLVKFVEETVRREHASSPEKPI 244 (468)
Q Consensus 181 ~lV~lHG~~~s~------~~~-~~~~~~L-~~~~~V~~~--D~~G~G~------Ss~~~~~~dl~~~i~~~~~~~~~~~i 244 (468)
.||+..|-+... ..+ ..+...+ .+...|+.+ ++|-.-. .+..+-++++...++....+.+..++
T Consensus 20 ~vi~ARGT~E~~~~G~~G~~~~~~L~~~~g~~~v~v~~V~~~YpA~~~~~~~~~~S~~~G~~~~~~~i~~~~~~CP~tki 99 (197)
T 3qpa_A 20 IFIYARGSTETGNLGTLGPSIASNLESAFGKDGVWIQGVGGAYRATLGDNALPRGTSSAAIREMLGLFQQANTKCPDATL 99 (197)
T ss_dssp EEEEECCTTCCTTTTTTHHHHHHHHHHHHCTTTEEEEECCTTCCCCGGGGGSTTSSCHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred EEEEeeCCCCCCCCCcccHHHHHHHHHhcCCCceEEEeeCCCCcCCCCcccCccccHHHHHHHHHHHHHHHHHhCCCCcE
Confidence 566777664432 212 2333444 356888888 7875421 13344556666666666666889999
Q ss_pred EEEEeChhHHHHHHHHHhCC----CCceEEEEeCCCC
Q 012190 245 YLVGDSFGGCLALAVAARNP----TIDLILILSNPAT 277 (468)
Q Consensus 245 ~LvGhS~GG~ia~~~a~~~P----~~v~~lVli~p~~ 277 (468)
+|+|+|.|+.++-..+...| ++|.++++++-+.
T Consensus 100 VL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP~ 136 (197)
T 3qpa_A 100 IAGGYXQGAALAAASIEDLDSAIRDKIAGTVLFGYTK 136 (197)
T ss_dssp EEEEETHHHHHHHHHHHHSCHHHHTTEEEEEEESCTT
T ss_pred EEEecccccHHHHHHHhcCCHhHHhheEEEEEeeCCc
Confidence 99999999999988777665 7899999987543
|
| >3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum} | Back alignment and structure |
|---|
Probab=96.12 E-value=0.015 Score=53.58 Aligned_cols=42 Identities=21% Similarity=0.317 Sum_probs=30.9
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHh
Q 012190 221 FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR 262 (468)
Q Consensus 221 ~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~ 262 (468)
+....+.+...++.+..+.+..++++.|||+||++|..+|..
T Consensus 103 ~~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~ 144 (258)
T 3g7n_A 103 WSAVHDTIITEVKALIAKYPDYTLEAVGHSLGGALTSIAHVA 144 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEEeccCHHHHHHHHHHHH
Confidence 344445555556655555778899999999999999877754
|
| >3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae} | Back alignment and structure |
|---|
Probab=95.95 E-value=0.0096 Score=56.67 Aligned_cols=42 Identities=21% Similarity=0.384 Sum_probs=32.8
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHh
Q 012190 221 FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR 262 (468)
Q Consensus 221 ~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~ 262 (468)
+..+.+++...++.+....+..++++.||||||++|..+|..
T Consensus 115 ~~~i~~~l~~~l~~~~~~~p~~~i~vtGHSLGGAlA~L~a~~ 156 (319)
T 3ngm_A 115 WNEISAAATAAVAKARKANPSFKVVSVGHSLGGAVATLAGAN 156 (319)
T ss_dssp HHHHHHHHHHHHHHHHHSSTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCceEEeecCHHHHHHHHHHHH
Confidence 445556666677776666778899999999999999987765
|
| >3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A* | Back alignment and structure |
|---|
Probab=95.94 E-value=0.016 Score=54.14 Aligned_cols=55 Identities=18% Similarity=0.208 Sum_probs=36.6
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHh----CCCCceEEEEeCC
Q 012190 221 FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR----NPTIDLILILSNP 275 (468)
Q Consensus 221 ~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~----~P~~v~~lVli~p 275 (468)
+....+++...++.+....+..++++.|||+||++|..+|.. .|.....++..++
T Consensus 117 ~~~~~~~~~~~l~~~~~~~p~~~l~vtGHSLGGalA~l~a~~l~~~~~~~~~~~~tfg~ 175 (279)
T 3uue_A 117 YNDLMDDIFTAVKKYKKEKNEKRVTVIGHSLGAAMGLLCAMDIELRMDGGLYKTYLFGL 175 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHHHHHHHSTTCCSEEEEESC
T ss_pred HHHHHHHHHHHHHHHHHhCCCceEEEcccCHHHHHHHHHHHHHHHhCCCCceEEEEecC
Confidence 344455555555555555677899999999999999987754 3444444555443
|
| >3qpd_A Cutinase 1; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted, phosphorylated Ser residue; HET: SEP; 1.57A {Aspergillus oryzae} PDB: 3gbs_A | Back alignment and structure |
|---|
Probab=95.90 E-value=0.079 Score=45.98 Aligned_cols=81 Identities=9% Similarity=-0.036 Sum_probs=56.4
Q ss_pred HhHhhhcCCeEEEEec--CCCCC------CCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCC----
Q 012190 197 LHHKPLGKAFEVRCLH--IPVYD------RTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNP---- 264 (468)
Q Consensus 197 ~~~~~L~~~~~V~~~D--~~G~G------~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P---- 264 (468)
.+...+.....|+.++ +|..- .++...-.+++..+++....+.+..+++|+|+|.|+.++-.++...|
T Consensus 40 ~L~~~~~~~v~v~~V~~~YpA~~~~~~~~~~s~~~g~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~l~~~~~ 119 (187)
T 3qpd_A 40 RLKLARSGDVACQGVGPRYTADLPSNALPEGTSQAAIAEAQGLFEQAVSKCPDTQIVAGGYSQGTAVMNGAIKRLSADVQ 119 (187)
T ss_dssp HHHHHSTTCEEEEECCSSCCCCGGGGGSTTSSCHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHTTSCHHHH
T ss_pred HHHHHcCCCceEEeeCCcccCcCccccccccchhHHHHHHHHHHHHHHHhCCCCcEEEEeeccccHHHHhhhhcCCHhhh
Confidence 3444455557899998 87432 12233445566666665555688999999999999999988776655
Q ss_pred CCceEEEEeCCCC
Q 012190 265 TIDLILILSNPAT 277 (468)
Q Consensus 265 ~~v~~lVli~p~~ 277 (468)
++|.++++++-+.
T Consensus 120 ~~V~avvlfGdP~ 132 (187)
T 3qpd_A 120 DKIKGVVLFGYTR 132 (187)
T ss_dssp HHEEEEEEESCTT
T ss_pred hhEEEEEEeeCCc
Confidence 5788999977543
|
| >1qoz_A AXE, acetyl xylan esterase; hydrolase, xylan degradation; HET: NAG; 1.90A {Trichoderma reesei} SCOP: c.69.1.30 | Back alignment and structure |
|---|
Probab=95.58 E-value=0.084 Score=46.81 Aligned_cols=97 Identities=10% Similarity=-0.017 Sum_probs=60.9
Q ss_pred eEEEeCCCCCchh--hHHHhHhhhc---CCeEEEEecCCCCC------CCC----hHHHHHHHHHHHHHHhhcCCCCcEE
Q 012190 181 TLLFLPGIDGLGL--GLILHHKPLG---KAFEVRCLHIPVYD------RTP----FEGLVKFVEETVRREHASSPEKPIY 245 (468)
Q Consensus 181 ~lV~lHG~~~s~~--~~~~~~~~L~---~~~~V~~~D~~G~G------~Ss----~~~~~~dl~~~i~~~~~~~~~~~i~ 245 (468)
.||+..|.+.... ....+...|. .+-++..+++|-.. ..+ ..+=++++...++....+.+..+++
T Consensus 6 ~vi~aRGT~E~~g~G~~g~~~~~l~~~~~g~~~~~V~YpA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkiv 85 (207)
T 1qoz_A 6 HVFGARETTVSQGYGSSATVVNLVIQAHPGTTSEAIVYPACGGQASCGGISYANSVVNGTNAAAAAINNFHNSCPDTQLV 85 (207)
T ss_dssp EEEEECCTTCCSSCGGGHHHHHHHHHHSTTEEEEECCSCCCSSCGGGTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred EEEEEecCCCCCCCCcchHHHHHHHHhcCCCceEEeeccccccccccCCccccccHHHHHHHHHHHHHHHHhhCCCCcEE
Confidence 4566666644421 1123333331 23367888998742 223 2344566666666666678899999
Q ss_pred EEEeChhHHHHHHHHH--------------hCC----CCceEEEEeCCCC
Q 012190 246 LVGDSFGGCLALAVAA--------------RNP----TIDLILILSNPAT 277 (468)
Q Consensus 246 LvGhS~GG~ia~~~a~--------------~~P----~~v~~lVli~p~~ 277 (468)
|+|+|.|+.++..++. ..| ++|.++++++-+.
T Consensus 86 l~GYSQGA~V~~~~~~~~~~~~~~i~~~~~~l~~~~~~~V~avvlfGdP~ 135 (207)
T 1qoz_A 86 LVGYSQGAQIFDNALCGGGDPGEGITNTAVPLTAGAVSAVKAAIFMGDPR 135 (207)
T ss_dssp EEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCTT
T ss_pred EEEeCchHHHHHHHHhccCcccccccCCCCCCChHHhccEEEEEEEcCCc
Confidence 9999999999887764 122 4688888877544
|
| >1g66_A Acetyl xylan esterase II; serine hydrolase, acetyl xylopyranose, hydrolase; 0.90A {Penicillium purpurogenum} SCOP: c.69.1.30 PDB: 1bs9_A 2axe_A* | Back alignment and structure |
|---|
Probab=95.44 E-value=0.18 Score=44.66 Aligned_cols=96 Identities=13% Similarity=0.054 Sum_probs=61.2
Q ss_pred eEEEeCCCCCch------hhHHHhHhhhcCCeEEEEecCCCC------CCCC----hHHHHHHHHHHHHHHhhcCCCCcE
Q 012190 181 TLLFLPGIDGLG------LGLILHHKPLGKAFEVRCLHIPVY------DRTP----FEGLVKFVEETVRREHASSPEKPI 244 (468)
Q Consensus 181 ~lV~lHG~~~s~------~~~~~~~~~L~~~~~V~~~D~~G~------G~Ss----~~~~~~dl~~~i~~~~~~~~~~~i 244 (468)
.||+..|.+... .....+.+.+. +-.+..+++|-. +..+ ..+=++++...++....+.+..++
T Consensus 6 ~vi~aRGT~E~~g~G~~g~~~~~l~~~~~-g~~~~~V~YpA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~tki 84 (207)
T 1g66_A 6 HVFGARETTASPGYGSSSTVVNGVLSAYP-GSTAEAINYPACGGQSSCGGASYSSSVAQGIAAVASAVNSFNSQCPSTKI 84 (207)
T ss_dssp EEEEECCTTCCSSCGGGHHHHHHHHHHST-TCEEEECCCCCCSSCGGGTSCCHHHHHHHHHHHHHHHHHHHHHHSTTCEE
T ss_pred EEEEEeCCCCCCCCCcccHHHHHHHHhCC-CCceEEeeccccccccccCCcchhhhHHHHHHHHHHHHHHHHHhCCCCcE
Confidence 456666665432 12222333332 236788899874 2223 344556666777766667889999
Q ss_pred EEEEeChhHHHHHHHHH--------------hCC----CCceEEEEeCCCC
Q 012190 245 YLVGDSFGGCLALAVAA--------------RNP----TIDLILILSNPAT 277 (468)
Q Consensus 245 ~LvGhS~GG~ia~~~a~--------------~~P----~~v~~lVli~p~~ 277 (468)
+|+|+|.|+.++..++. ..| ++|.++++++-+.
T Consensus 85 vl~GYSQGA~V~~~~~~~~~~~~~~i~~~~~~l~~~~~~~V~avvlfGdP~ 135 (207)
T 1g66_A 85 VLVGYSQGGEIMDVALCGGGDPNQGYTNTAVQLSSSAVNMVKAAIFMGDPM 135 (207)
T ss_dssp EEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCTT
T ss_pred EEEeeCchHHHHHHHHhcccccccccccCCCCCChhhhccEEEEEEEcCCC
Confidence 99999999999887764 122 5688888877544
|
| >3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=95.44 E-value=0.019 Score=54.33 Aligned_cols=39 Identities=21% Similarity=0.290 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHh
Q 012190 224 LVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR 262 (468)
Q Consensus 224 ~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~ 262 (468)
..+.+...++.+....+..++++.|||+||++|..+|..
T Consensus 136 ~~~~i~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~ 174 (301)
T 3o0d_A 136 TYNQIGPKLDSVIEQYPDYQIAVTGHSLGGAAALLFGIN 174 (301)
T ss_dssp HHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCceEEEeccChHHHHHHHHHHH
Confidence 344444555554445677899999999999999988865
|
| >3aja_A Putative uncharacterized protein; alpha-beta hydrolase, serine esterase, cutinase, lipase, HYD; 2.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=95.30 E-value=0.16 Score=47.60 Aligned_cols=82 Identities=11% Similarity=0.041 Sum_probs=56.8
Q ss_pred HHhHhhh-cCCeEEEEecCCCCCC--------C----ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHh
Q 012190 196 ILHHKPL-GKAFEVRCLHIPVYDR--------T----PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR 262 (468)
Q Consensus 196 ~~~~~~L-~~~~~V~~~D~~G~G~--------S----s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~ 262 (468)
..+...+ .....++.+++|-.-. - +..+=++++...++....+.++.+++|+|+|.|+.++-.++..
T Consensus 74 ~~L~~~~~g~~v~v~~V~YPA~~~~~~~~~~~~~Y~~S~~~G~~~~~~~i~~~~~~CP~TkiVL~GYSQGA~V~~~~~~~ 153 (302)
T 3aja_A 74 KPLAEQFGPDRLQVYTTPYTAQFHNPFAADKQMSYNDSRAEGMRTTVKAMTDMNDRCPLTSYVIAGFSQGAVIAGDIASD 153 (302)
T ss_dssp HHHHHHSCTTTEEEEECCCCCCCCCTTTTCCCCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHcCCCcceEEeccccccccccccccccccccccHHHHHHHHHHHHHHHHhhCCCCcEEEEeeCchHHHHHHHHHh
Confidence 3444555 4567788889876521 1 2344456666666666666889999999999999998877643
Q ss_pred --------CCCCceEEEEeCCCC
Q 012190 263 --------NPTIDLILILSNPAT 277 (468)
Q Consensus 263 --------~P~~v~~lVli~p~~ 277 (468)
.+++|.+++|++-+.
T Consensus 154 i~~g~~~~~~~~V~aVvLfGdP~ 176 (302)
T 3aja_A 154 IGNGRGPVDEDLVLGVTLIADGR 176 (302)
T ss_dssp HHTTCSSSCGGGEEEEEEESCTT
T ss_pred ccCCCCCCChHHEEEEEEEeCCC
Confidence 347898999876543
|
| >3dcn_A Cutinase, cutin hydrolase; catalytic triad, secreted, serine esterase; 1.90A {Glomerella cingulata} SCOP: c.69.1.0 PDB: 3dd5_A 3dea_A* | Back alignment and structure |
|---|
Probab=95.19 E-value=0.13 Score=45.05 Aligned_cols=97 Identities=9% Similarity=-0.052 Sum_probs=63.7
Q ss_pred eEEEeCCCCCchh--------hHHHhHhhh-cCCeEEEEe--cCCCCCC------CChHHHHHHHHHHHHHHhhcCCCCc
Q 012190 181 TLLFLPGIDGLGL--------GLILHHKPL-GKAFEVRCL--HIPVYDR------TPFEGLVKFVEETVRREHASSPEKP 243 (468)
Q Consensus 181 ~lV~lHG~~~s~~--------~~~~~~~~L-~~~~~V~~~--D~~G~G~------Ss~~~~~~dl~~~i~~~~~~~~~~~ 243 (468)
.|||..|-+.... ....+...+ .+...|+.+ ++|-.-. .+..+-++++...++....+.++.+
T Consensus 27 ~vi~ARGT~E~~g~G~~~G~~~~~~L~~~~g~~~v~v~~V~~~YpA~~~~~~~~~~S~~~G~~~~~~~i~~~~~~CP~tk 106 (201)
T 3dcn_A 27 IYIFARASTEPGNMGISAGPIVADALERIYGANDVWVQGVGGPYLADLASNFLPDGTSSAAINEARRLFTLANTKCPNAA 106 (201)
T ss_dssp EEEEECCTTCCTTTCSSHHHHHHHHHHHHHCGGGEEEEECCTTCCCCSGGGGSTTSSCHHHHHHHHHHHHHHHHHCTTSE
T ss_pred EEEEecCCCCCCCCCccccHHHHHHHHHhcCCCceEEEEeCCCccccCCcccccCCCHHHHHHHHHHHHHHHHHhCCCCc
Confidence 5677777644432 122233344 345778888 6775321 1334455666666666666688999
Q ss_pred EEEEEeChhHHHHHHHHHhCC----CCceEEEEeCCCC
Q 012190 244 IYLVGDSFGGCLALAVAARNP----TIDLILILSNPAT 277 (468)
Q Consensus 244 i~LvGhS~GG~ia~~~a~~~P----~~v~~lVli~p~~ 277 (468)
++|+|+|.|+.++-.++...| ++|.++++++-+.
T Consensus 107 iVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP~ 144 (201)
T 3dcn_A 107 IVSGGYSQGTAVMAGSISGLSTTIKNQIKGVVLFGYTK 144 (201)
T ss_dssp EEEEEETHHHHHHHHHHTTSCHHHHHHEEEEEEETCTT
T ss_pred EEEEeecchhHHHHHHHhcCChhhhhheEEEEEeeCcc
Confidence 999999999999988776655 5788999876543
|
| >2czq_A Cutinase-like protein; alpha/beta hydrolase fold, hydrolase; HET: CIT; 1.05A {Cryptococcus SP} | Back alignment and structure |
|---|
Probab=94.05 E-value=0.27 Score=43.34 Aligned_cols=67 Identities=10% Similarity=0.017 Sum_probs=50.8
Q ss_pred EEEEecCCC---CCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhC--C----CCceEEEEeCCC
Q 012190 207 EVRCLHIPV---YDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARN--P----TIDLILILSNPA 276 (468)
Q Consensus 207 ~V~~~D~~G---~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~--P----~~v~~lVli~p~ 276 (468)
..+.+++|- +. + .+-++++...++....+.++.+++|+|+|.|+.++-.++... | ++|.+++|++-+
T Consensus 42 ~~~~V~YpA~~~y~--S-~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~lg~~~~~~~~V~avvlfGdP 117 (205)
T 2czq_A 42 TIYNTVYTADFSQN--S-AAGTADIIRRINSGLAANPNVCYILQGYSQGAAATVVALQQLGTSGAAFNAVKGVFLIGNP 117 (205)
T ss_dssp EEEECCSCCCTTCC--C-HHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHHCSSSHHHHHEEEEEEESCT
T ss_pred CceeecccccCCCc--C-HHHHHHHHHHHHHHHhhCCCCcEEEEeeCchhHHHHHHHHhccCChhhhhhEEEEEEEeCC
Confidence 346777764 33 3 677777788888777778899999999999999988777554 3 468898987743
|
| >4az3_B Lysosomal protective protein 20 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_B* | Back alignment and structure |
|---|
Probab=93.67 E-value=0.15 Score=42.89 Aligned_cols=59 Identities=15% Similarity=0.191 Sum_probs=48.6
Q ss_pred cCCceEEEEEeCCCCCCCcHHHHHHHHHhCC-----------------------------CcEEEEeCCCCccccccCcH
Q 012190 377 AVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ-----------------------------NCIVRNFKDNGHTLLLEEGI 427 (468)
Q Consensus 377 ~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~-----------------------------~~~~~~i~~aGH~~~~e~p~ 427 (468)
.-.++||+.+|+.|-+++.. ..+...+.+. +..++.+.+|||++..++|+
T Consensus 61 ~~girVliy~Gd~D~icn~~-G~~~~i~~L~w~~~~~~~~w~~~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~ 139 (155)
T 4az3_B 61 SQKYQILLYNGDVDMACNFM-GDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPL 139 (155)
T ss_dssp TCCCEEEEEEETTCSSSCHH-HHHHHHHHTCCSSCCCCEEEEEEETTTEEEEEEEEEEETTEEEEEETTCCSCHHHHCHH
T ss_pred HcCceEEEEecccCcccCcH-hHHHHHHhcccccccccccceeecccCCCEEEEEEEEeCCEEEEEECCCcCcChhhCHH
Confidence 44679999999999999988 6777766552 23467888999999999999
Q ss_pred HHHHHHHhc
Q 012190 428 SLLTIIKGT 436 (468)
Q Consensus 428 ~~~~~I~~~ 436 (468)
...+.+.+|
T Consensus 140 ~al~m~~~f 148 (155)
T 4az3_B 140 AAFTMFSRF 148 (155)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999943
|
| >2ory_A Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Photobacterium SP} | Back alignment and structure |
|---|
Probab=92.14 E-value=0.12 Score=49.67 Aligned_cols=35 Identities=20% Similarity=0.296 Sum_probs=24.5
Q ss_pred HHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHh
Q 012190 228 VEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR 262 (468)
Q Consensus 228 l~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~ 262 (468)
+.+.++......+..++++.|||+||++|..+|..
T Consensus 152 l~~~l~~~~~~~~~~~i~vtGHSLGGAlA~l~a~~ 186 (346)
T 2ory_A 152 ILQFLNEKIGPEGKAKICVTGHSKGGALSSTLALW 186 (346)
T ss_dssp HHHHHHHHHCTTCCEEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHhhhhccCCceEEEecCChHHHHHHHHHHH
Confidence 34444443322345689999999999999988764
|
| >1gxs_B P-(S)-hydroxymandelonitrIle lyase chain B; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=91.62 E-value=0.35 Score=40.72 Aligned_cols=56 Identities=16% Similarity=0.277 Sum_probs=47.0
Q ss_pred CceEEEEEeCCCCCCCcHHHHHHHHHhCC---------------------------CcEEEEeCCCCccccccCcHHHHH
Q 012190 379 KAEVLVLASGKDNMLPSEDEAKRLNNSLQ---------------------------NCIVRNFKDNGHTLLLEEGISLLT 431 (468)
Q Consensus 379 ~~PvLlI~G~~D~~v~~~~~~~~l~~~l~---------------------------~~~~~~i~~aGH~~~~e~p~~~~~ 431 (468)
..++|+.+|+.|-+++.. ..+...+.+. +..++.+.+|||++..++|+...+
T Consensus 66 girVliysGd~D~i~~~~-Gt~~wi~~L~w~~~~~~~~w~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~al~ 144 (158)
T 1gxs_B 66 GLRVWVYSGDTDSVVPVS-STRRSLAALELPVKTSWYPWYMAPTEREVGGWSVQYEGLTYVTVRGAGHLVPVHRPAQAFL 144 (158)
T ss_dssp TCEEEEEEETTCSSSCHH-HHHHHHHTTCCCEEEEEEEEESSTTCCSEEEEEEEETTEEEEEETTCCSSHHHHCHHHHHH
T ss_pred CCeEEEEecccCccCCcH-HHHHHHHHCCCcccCCccceEECCCCCcccceEEEeCCEEEEEECCCcccCcccCcHHHHH
Confidence 679999999999999988 5777666552 245678899999999999999999
Q ss_pred HHHh
Q 012190 432 IIKG 435 (468)
Q Consensus 432 ~I~~ 435 (468)
.+.+
T Consensus 145 m~~~ 148 (158)
T 1gxs_B 145 LFKQ 148 (158)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9994
|
| >2yij_A Phospholipase A1-iigamma; hydrolase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=86.85 E-value=0.12 Score=50.59 Aligned_cols=22 Identities=32% Similarity=0.383 Sum_probs=19.1
Q ss_pred CcEEEEEeChhHHHHHHHHHhC
Q 012190 242 KPIYLVGDSFGGCLALAVAARN 263 (468)
Q Consensus 242 ~~i~LvGhS~GG~ia~~~a~~~ 263 (468)
.++++.|||+||++|..+|...
T Consensus 228 ~~I~vTGHSLGGALA~L~A~~L 249 (419)
T 2yij_A 228 VSITICGHSLGAALATLSATDI 249 (419)
Confidence 5799999999999999888654
|
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* | Back alignment and structure |
|---|
Probab=83.41 E-value=1.8 Score=42.58 Aligned_cols=57 Identities=18% Similarity=0.182 Sum_probs=46.6
Q ss_pred CceEEEEEeCCCCCCCcHHHHHHHHHhCC-------------------------------CcEEEEeCCCCccccccCcH
Q 012190 379 KAEVLVLASGKDNMLPSEDEAKRLNNSLQ-------------------------------NCIVRNFKDNGHTLLLEEGI 427 (468)
Q Consensus 379 ~~PvLlI~G~~D~~v~~~~~~~~l~~~l~-------------------------------~~~~~~i~~aGH~~~~e~p~ 427 (468)
..+||+.+|+.|-+++.. ..+.+.+.+. +.+++.+.+|||++..++|+
T Consensus 327 girVlIysGd~D~i~~~~-Gt~~wi~~L~w~~~~~F~~a~~~~w~~~~~~~vaG~~~~~~~Ltf~~V~~AGHmVP~dqP~ 405 (421)
T 1cpy_A 327 DLPILVYAGDKDFICNWL-GNKAWTDVLPWKYDEEFASQKVRNWTASITDEVAGEVKSYKHFTYLRVFNGGHMVPFDVPE 405 (421)
T ss_dssp TCCEEEEEETTCSTTCHH-HHHHHHHHCCSTTHHHHHHSCCEEEECTTTCSEEEEECEETTEEEEEETTCCSSHHHHCHH
T ss_pred CCeEEEEECCcccccChH-HHHHHHHhccCccchhhhhccccceEEcCCCceeeEEEEeccEEEEEECCCcccCcccCHH
Confidence 578999999999999987 5666655441 24567889999999999999
Q ss_pred HHHHHHHhc
Q 012190 428 SLLTIIKGT 436 (468)
Q Consensus 428 ~~~~~I~~~ 436 (468)
...+.+.+|
T Consensus 406 ~al~m~~~f 414 (421)
T 1cpy_A 406 NALSMVNEW 414 (421)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999843
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=83.08 E-value=1.9 Score=42.93 Aligned_cols=57 Identities=16% Similarity=0.200 Sum_probs=47.3
Q ss_pred CceEEEEEeCCCCCCCcHHHHHHHHHhCC-----------------------------CcEEEEeCCCCccccccCcHHH
Q 012190 379 KAEVLVLASGKDNMLPSEDEAKRLNNSLQ-----------------------------NCIVRNFKDNGHTLLLEEGISL 429 (468)
Q Consensus 379 ~~PvLlI~G~~D~~v~~~~~~~~l~~~l~-----------------------------~~~~~~i~~aGH~~~~e~p~~~ 429 (468)
..+||+.+|+.|-+++.. ..+...+.+. +.+++.+.+|||++..++|+..
T Consensus 361 girVlIYsGD~D~icn~~-Gt~~wi~~L~~~~~~~~~pw~~~~~~~~~~vaG~~~~y~nLtf~tV~gAGHmVP~dqP~~a 439 (452)
T 1ivy_A 361 KYQILLYNGDVDMACNFM-GDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAA 439 (452)
T ss_dssp CCEEEEEEETTCSSSCHH-HHHHHHHHTCCCEEEEEEEEEEECTTSCEEEEEEEEEESSEEEEEETTCCSSHHHHCHHHH
T ss_pred CceEEEEeCCCCccCCcH-HHHHHHHhcCCcccccceeeeeccCCCCcccceEEEEEcceEEEEECCCcccCcccChHHH
Confidence 579999999999999988 5777766553 2345678999999999999999
Q ss_pred HHHHHhc
Q 012190 430 LTIIKGT 436 (468)
Q Consensus 430 ~~~I~~~ 436 (468)
.+.+.+|
T Consensus 440 l~m~~~f 446 (452)
T 1ivy_A 440 FTMFSRF 446 (452)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999943
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 468 | ||||
| d1mo2a_ | 255 | c.69.1.22 (A:) Erythromycin polyketide synthase {S | 2e-05 | |
| d1m33a_ | 256 | c.69.1.26 (A:) Biotin biosynthesis protein BioH {E | 3e-04 | |
| d1tcaa_ | 317 | c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Cand | 4e-04 |
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 43.6 bits (102), Expect = 2e-05
Identities = 23/162 (14%), Positives = 45/162 (27%), Gaps = 18/162 (11%)
Query: 148 DYLDAAKEIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHH--KPLGKA 205
D L + + G + + G T++ G + L
Sbjct: 11 DLLAGLSDFREHFDGSDGFSLDLVDMADGPGEVTVICCAGTAAISGPHEFTRLAGALRGI 70
Query: 206 FEVRCLHIPVYDRTP-----FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVA 260
VR + P Y+ + + V R +KP + G S G +A A+A
Sbjct: 71 APVRAVPQPGYEEGEPLPSSMAAVAAVQADAVIRT---QGDKPFVVAGHSAGALMAYALA 127
Query: 261 ARNP----TIDLILILSNPATSFGRSQLQPLFPILKAMPDEL 298
++++ + L+ + L
Sbjct: 128 TELLDRGHPPRGVVLIDVYP----PGHQDAMNAWLEELTATL 165
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Score = 40.2 bits (92), Expect = 3e-04
Identities = 38/249 (15%), Positives = 73/249 (29%), Gaps = 18/249 (7%)
Query: 177 KGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREH 236
+G+ L+ L G + L F + + +P + R+ +
Sbjct: 9 QGNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGF--GALSLADMAEAV 66
Query: 237 ASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPD 296
+G S GG +A +A +P L+ + F + D
Sbjct: 67 LQQAPDKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCF-------------SARD 113
Query: 297 ELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDT 356
E P +L+ +E L + + + L + + + D
Sbjct: 114 EWPGIKPDVLAGFQQQLSDDQQRTVERFLALQTMGTETARQDARALKKTVLALPMPEVDV 173
Query: 357 LLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKD 416
L L++LK+ L V L L D ++P + L+ + F
Sbjct: 174 LNGGLEILKTVDLR--QPLQNVSMPFLRLYGYLDGLVPRKV-VPMLDKLWPHSESYIFAK 230
Query: 417 NGHTLLLEE 425
H +
Sbjct: 231 AAHAPFISH 239
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Score = 40.1 bits (93), Expect = 4e-04
Identities = 17/121 (14%), Positives = 37/121 (30%), Gaps = 4/121 (3%)
Query: 173 GRPLKGSPTLLFLPGIDGLGLGLILHH--KPLGKA-FEVRCLHIPVYDRTPFEGLVKFVE 229
P S +L +PG G + + + + P + + +++
Sbjct: 25 ASPSSVSKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLNDTQVNTEYMV 84
Query: 230 ETVRREHASSPEKPIYLVGDSFGGCLALAVAARNP-TIDLILILSNPATSFGRSQLQPLF 288
+ +A S + ++ S GG +A P + L A + + L
Sbjct: 85 NAITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVLAGPL 144
Query: 289 P 289
Sbjct: 145 D 145
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 468 | |||
| d1c4xa_ | 281 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 99.97 | |
| d1j1ia_ | 268 | Meta cleavage compound hydrolase CarC {Janthinobac | 99.97 | |
| d1a8qa_ | 274 | Bromoperoxidase A1 {Streptomyces aureofaciens [Tax | 99.97 | |
| d1bn7a_ | 291 | Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1 | 99.97 | |
| d1q0ra_ | 297 | Aclacinomycin methylesterase RdmC {Streptomyces pu | 99.96 | |
| d1uk8a_ | 271 | Meta-cleavage product hydrolase CumD {Pseudomonas | 99.96 | |
| d1ehya_ | 293 | Bacterial epoxide hydrolase {Agrobacterium radioba | 99.96 | |
| d1m33a_ | 256 | Biotin biosynthesis protein BioH {Escherichia coli | 99.96 | |
| d2rhwa1 | 283 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 99.96 | |
| d1zd3a2 | 322 | Mammalian epoxide hydrolase, C-terminal domain {Hu | 99.96 | |
| d1brta_ | 277 | Bromoperoxidase A2 {Streptomyces aureofaciens [Tax | 99.96 | |
| d1a88a_ | 275 | Chloroperoxidase L {Streptomyces lividans [TaxId: | 99.96 | |
| d1hkha_ | 279 | Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] | 99.96 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 99.96 | |
| d1mtza_ | 290 | Tricorn interacting factor F1 {Archaeon Thermoplas | 99.96 | |
| d1b6ga_ | 310 | Haloalkane dehalogenase {Xanthobacter autotrophicu | 99.96 | |
| d1a8sa_ | 273 | Chloroperoxidase F {Pseudomonas fluorescens [TaxId | 99.95 | |
| d1azwa_ | 313 | Proline iminopeptidase {Xanthomonas campestris, pv | 99.95 | |
| d1mj5a_ | 298 | Haloalkane dehalogenase {Sphingomonas paucimobilis | 99.95 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 99.95 | |
| d3c70a1 | 256 | Hydroxynitrile lyase {Rubber tree (Hevea brasilien | 99.94 | |
| d1wm1a_ | 313 | Proline aminopeptidase {Serratia marcescens [TaxId | 99.94 | |
| d1imja_ | 208 | Ccg1/TafII250-interacting factor B (Cib) {Human (H | 99.94 | |
| d1r3da_ | 264 | Hypothetical protein VC1974 {Vibrio cholerae [TaxI | 99.92 | |
| d1tqha_ | 242 | Carboxylesterase Est {Bacillus stearothermophilus | 99.91 | |
| d1thta_ | 302 | Myristoyl-ACP-specific thioesterase {Vibrio harvey | 99.91 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 99.9 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 99.9 | |
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 99.9 | |
| d1uxoa_ | 186 | Hypothetical protein YdeN {Bacillus subtilis [TaxI | 99.87 | |
| d2fuka1 | 218 | XC6422 protein {Xanthomonas campestris [TaxId: 339 | 99.85 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 99.83 | |
| d1xkta_ | 286 | Fatty acid synthase {Human (Homo sapiens) [TaxId: | 99.83 | |
| d1jmkc_ | 230 | Surfactin synthetase, SrfA {Bacillus subtilis [Tax | 99.82 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 99.8 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 99.79 | |
| d1l7aa_ | 318 | Cephalosporin C deacetylase {Bacillus subtilis [Ta | 99.77 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 99.76 | |
| d2hu7a2 | 260 | Acylamino-acid-releasing enzyme, C-terminal donain | 99.75 | |
| d1ufoa_ | 238 | Hypothetical protein TT1662 {Thermus thermophilus | 99.75 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 99.74 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 99.74 | |
| d2r8ba1 | 203 | Uncharacterized protein Atu2452 {Agrobacterium tum | 99.71 | |
| d1fj2a_ | 229 | Acyl protein thioesterase 1 {Human (Homo sapiens) | 99.68 | |
| d1mo2a_ | 255 | Erythromycin polyketide synthase {Saccharopolyspor | 99.67 | |
| d1vlqa_ | 322 | Acetyl xylan esterase TM0077 {Thermotoga maritima | 99.66 | |
| d1jfra_ | 260 | Lipase {Streptomyces exfoliatus [TaxId: 1905]} | 99.66 | |
| d3b5ea1 | 209 | Uncharacterized protein Mll8374 {Mesorhizobium lot | 99.66 | |
| d2h1ia1 | 202 | Carboxylesterase {Bacillus cereus [TaxId: 1396]} | 99.65 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 99.62 | |
| d1tcaa_ | 317 | Triacylglycerol lipase {Yeast (Candida antarctica) | 99.6 | |
| d2dsta1 | 122 | Hypothetical protein TTHA1544 {Thermus thermophilu | 99.59 | |
| d1qlwa_ | 318 | A novel bacterial esterase {Alcaligenes sp. [TaxId | 99.58 | |
| d2pbla1 | 261 | Uncharacterized protein TM1040_2492 {Silicibacter | 99.57 | |
| d2i3da1 | 218 | Hypothetical protein Atu1826 {Agrobacterium tumefa | 99.56 | |
| d2bgra2 | 258 | Dipeptidyl peptidase IV/CD26, C-terminal domain {P | 99.56 | |
| d1dina_ | 233 | Dienelactone hydrolase {Pseudomonas sp., B13 [TaxI | 99.52 | |
| d1cvla_ | 319 | Lipase {Chromobacterium viscosum [TaxId: 42739]} | 99.48 | |
| d1xfda2 | 258 | Dipeptidyl aminopeptidase-like protein 6, DPP6, C- | 99.45 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 99.41 | |
| d1ex9a_ | 285 | Lipase {Pseudomonas aeruginosa [TaxId: 287]} | 99.41 | |
| d1lzla_ | 317 | Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | 99.14 | |
| d1ju3a2 | 347 | Bacterial cocaine esterase N-terminal domain {Rhod | 99.1 | |
| d1qfma2 | 280 | Prolyl oligopeptidase, C-terminal domain {Pig (Sus | 99.09 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 99.08 | |
| d1jjfa_ | 255 | Feruloyl esterase domain of the cellulosomal xylan | 99.08 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 99.01 | |
| d1ei9a_ | 279 | Palmitoyl protein thioesterase 1 {Cow (Bos taurus) | 98.97 | |
| d1u4na_ | 308 | Carboxylesterase {Alicyclobacillus acidocaldarius | 98.96 | |
| d1jjia_ | 311 | Carboxylesterase {Archaeon Archaeoglobus fulgidus | 98.96 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 98.8 | |
| d3c8da2 | 246 | Enterochelin esterase, catalytic domain {Shigella | 98.8 | |
| d1sfra_ | 288 | Antigen 85a {Mycobacterium tuberculosis [TaxId: 17 | 98.71 | |
| d1rp1a2 | 337 | Pancreatic lipase, N-terminal domain {Dog (Canis f | 98.67 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 98.65 | |
| d1bu8a2 | 338 | Pancreatic lipase, N-terminal domain {Rat (Rattus | 98.62 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 98.55 | |
| d1wb4a1 | 273 | Feruloyl esterase domain of the cellulosomal xylan | 98.53 | |
| d1dqza_ | 280 | Antigen 85c {Mycobacterium tuberculosis [TaxId: 17 | 98.4 | |
| d1r88a_ | 267 | Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta | 98.37 | |
| d1ivya_ | 452 | Human 'protective protein', HPP {Human (Homo sapie | 98.33 | |
| d1pv1a_ | 299 | Hypothetical esterase YJL068C {Baker's yeast (Sacc | 98.32 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 98.32 | |
| d2d81a1 | 318 | Polyhydroxybutyrate depolymerase {Penicillium funi | 98.32 | |
| d2gzsa1 | 265 | Enterobactin and salmochelin hydrolase IroE {Esche | 98.29 | |
| d1wpxa1 | 421 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 98.14 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 97.93 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 97.69 | |
| d1uwca_ | 261 | Feruloyl esterase A {Aspergillus niger [TaxId: 506 | 96.16 | |
| d1lgya_ | 265 | Triacylglycerol lipase {Rhizopus niveus [TaxId: 48 | 96.05 | |
| d3tgla_ | 265 | Triacylglycerol lipase {Rhizomucor miehei [TaxId: | 95.93 | |
| d1tiaa_ | 271 | Triacylglycerol lipase {Penicillium camembertii [T | 95.9 | |
| d1tiba_ | 269 | Triacylglycerol lipase {Thermomyces lanuginosus, f | 95.9 | |
| d1thga_ | 544 | Type-B carboxylesterase/lipase {Fungus (Geotrichum | 94.93 | |
| d1llfa_ | 534 | Type-B carboxylesterase/lipase {Candida cylindrace | 94.66 | |
| d1cexa_ | 197 | Cutinase {Fungus (Fusarium solani), subsp. pisi [T | 94.42 | |
| d1qe3a_ | 483 | Thermophilic para-nitrobenzyl esterase (PNB estera | 94.35 | |
| d2ha2a1 | 542 | Acetylcholinesterase {Mouse (Mus musculus) [TaxId: | 94.31 | |
| d2h7ca1 | 532 | Mammalian carboxylesterase (liver carboxylesterase | 93.93 | |
| d1ukca_ | 517 | Esterase EstA {Aspergillus niger [TaxId: 5061]} | 93.88 | |
| d1ea5a_ | 532 | Acetylcholinesterase {Pacific electric ray (Torped | 93.64 | |
| d1g66a_ | 207 | Acetylxylan esterase {Penicillium purpurogenum [Ta | 92.81 | |
| d1qoza_ | 207 | Acetylxylan esterase {Trichoderma reesei [TaxId: 5 | 92.68 | |
| d1p0ia_ | 526 | Butyryl cholinesterase {Human (Homo sapiens) [TaxI | 92.49 | |
| d2bcea_ | 579 | Bile-salt activated lipase (cholesterol esterase) | 92.01 | |
| d1dx4a_ | 571 | Acetylcholinesterase {Fruit fly (Drosophila melano | 91.7 |
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Probab=99.97 E-value=1.2e-31 Score=252.92 Aligned_cols=243 Identities=16% Similarity=0.135 Sum_probs=159.4
Q ss_pred eeecCCCCCCCCCCeEEEeCCCCCchh---hHHHhHhhhcCCeEEEEecCCCCCCCC------------hHHHHHHHHHH
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGIDGLGL---GLILHHKPLGKAFEVRCLHIPVYDRTP------------FEGLVKFVEET 231 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~~s~~---~~~~~~~~L~~~~~V~~~D~~G~G~Ss------------~~~~~~dl~~~ 231 (468)
++|...|+| ++|+|||+||++++.. .|..+++.|+++|+|+++|+||||.|+ .+++++++.++
T Consensus 16 ~h~~~~G~~--~~p~ivllHG~~~~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~ 93 (281)
T d1c4xa_ 16 SHALVAGDP--QSPAVVLLHGAGPGAHAASNWRPIIPDLAENFFVVAPDLIGFGQSEYPETYPGHIMSWVGMRVEQILGL 93 (281)
T ss_dssp EEEEEESCT--TSCEEEEECCCSTTCCHHHHHGGGHHHHHTTSEEEEECCTTSTTSCCCSSCCSSHHHHHHHHHHHHHHH
T ss_pred EEEEEEecC--CCCEEEEECCCCCCCcHHHHHHHHHHHHhCCCEEEEEeCCCCccccccccccccchhhHHHhhhhcccc
Confidence 577778874 6899999999986543 578889999999999999999999983 45777888888
Q ss_pred HHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcC
Q 012190 232 VRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMG 311 (468)
Q Consensus 232 i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (468)
++++. .++++++||||||.+|+.+|.++|++++++|++++..............+...............+.....
T Consensus 94 i~~~~----~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (281)
T d1c4xa_ 94 MNHFG----IEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELARLLAFYADPRLTPYRELIHSFVY 169 (281)
T ss_dssp HHHHT----CSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHHHHHHTGGGSCCHHHHHHHHHTTSS
T ss_pred ccccc----cccceeccccccccccccccccccccccceEEeccccCccccchhHHHHHHHhhhhcccchhhhhhhhhcc
Confidence 88743 45899999999999999999999999999999998654332221111112111111000001111111111
Q ss_pred ChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHH-HHH------hHHHhhhcccCCceEEE
Q 012190 312 DPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLL-KSA------SAYANSRLHAVKAEVLV 384 (468)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~------~~~~~~~l~~i~~PvLl 384 (468)
++.. ............... ............ ... .......+.++++|+|+
T Consensus 170 ~~~~--------~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~li 227 (281)
T d1c4xa_ 170 DPEN--------FPGMEEIVKSRFEVA--------------NDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLV 227 (281)
T ss_dssp CSTT--------CTTHHHHHHHHHHHH--------------HCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEE
T ss_pred cccc--------cchhhhHHHHHhhhc--------------ccchhhhhhhhhhhHHhhhhhhhccchhhhhhhccceEE
Confidence 1100 000000000000000 000000000000 000 00012446788999999
Q ss_pred EEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 385 LASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 385 I~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
|+|++|.++|++ ..+.+.+.++++++++++++||++++|+|+++++.|. +|++
T Consensus 228 i~G~~D~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~Fl~ 280 (281)
T d1c4xa_ 228 FHGRQDRIVPLD-TSLYLTKHLKHAELVVLDRCGHWAQLERWDAMGPMLM--EHFR 280 (281)
T ss_dssp EEETTCSSSCTH-HHHHHHHHCSSEEEEEESSCCSCHHHHSHHHHHHHHH--HHHH
T ss_pred EEeCCCCCcCHH-HHHHHHHHCCCCEEEEECCCCCchHHhCHHHHHHHHH--HHhC
Confidence 999999999999 7999999999999999999999999999999999999 6765
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Probab=99.97 E-value=2.9e-30 Score=240.87 Aligned_cols=250 Identities=13% Similarity=0.189 Sum_probs=163.1
Q ss_pred ccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchh---hHHHhHhhhcCCeEEEEecCCCCCCC-------ChHHHH
Q 012190 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGL---GLILHHKPLGKAFEVRCLHIPVYDRT-------PFEGLV 225 (468)
Q Consensus 156 ~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~---~~~~~~~~L~~~~~V~~~D~~G~G~S-------s~~~~~ 225 (468)
+++.||.. ++|.+.|+ +|+|||+||++++.. .|..+++.|+++|+|+++|+||||.| +.++++
T Consensus 6 ~~~~dg~~---l~y~~~G~----g~~vvllHG~~~~~~~~~~~~~~~~~l~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~ 78 (268)
T d1j1ia_ 6 FVNAGGVE---TRYLEAGK----GQPVILIHGGGAGAESEGNWRNVIPILARHYRVIAMDMLGFGKTAKPDIEYTQDRRI 78 (268)
T ss_dssp EEEETTEE---EEEEEECC----SSEEEEECCCSTTCCHHHHHTTTHHHHTTTSEEEEECCTTSTTSCCCSSCCCHHHHH
T ss_pred EEEECCEE---EEEEEEcC----CCeEEEECCCCCCccHHHHHHHHHHHHhcCCEEEEEcccccccccCCcccccccccc
Confidence 44567765 67888887 688999999987554 57788899999999999999999998 478899
Q ss_pred HHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHH
Q 012190 226 KFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYL 305 (468)
Q Consensus 226 ~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (468)
+++.++++.+. ...+++++||||||.+++.+|.++|++|+++|+++|+....... ........... ........
T Consensus 79 ~~~~~~i~~l~---~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~ 152 (268)
T d1j1ia_ 79 RHLHDFIKAMN---FDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIH-EDLRPIINYDF--TREGMVHL 152 (268)
T ss_dssp HHHHHHHHHSC---CSSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC-----------CCS--CHHHHHHH
T ss_pred ccchhhHHHhh---hcccceeeeccccccccchhhccChHhhheeeecCCCccccccc-hhhhhhhhhhh--hhhhhHHH
Confidence 99999998843 23578999999999999999999999999999999865332211 11111111100 00001111
Q ss_pred hhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhH--HHhhhcccCCceEE
Q 012190 306 LSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASA--YANSRLHAVKAEVL 383 (468)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~l~~i~~PvL 383 (468)
......+. ................. ................... ...+.+.++++|+|
T Consensus 153 ~~~~~~~~---------~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l 212 (268)
T d1j1ia_ 153 VKALTNDG---------FKIDDAMINSRYTYATD-----------EATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTL 212 (268)
T ss_dssp HHHHSCTT---------CCCCHHHHHHHHHHHHS-----------HHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEE
T ss_pred HHHHhhhh---------hhhhhhhhHHHHHhhhh-----------hhhhhhhhhhhhhhhccccccchhhhHhhCCCCEE
Confidence 11111111 00000000000000000 0000001111111111000 01245678999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 384 VLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 384 lI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
+|+|++|.++|++ ..+.+.+.++++++++++++||++++|+|+++++.|. +|+.+
T Consensus 213 ~i~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~--~FL~~ 267 (268)
T d1j1ia_ 213 VVQGKDDKVVPVE-TAYKFLDLIDDSWGYIIPHCGHWAMIEHPEDFANATL--SFLSL 267 (268)
T ss_dssp EEEETTCSSSCHH-HHHHHHHHCTTEEEEEESSCCSCHHHHSHHHHHHHHH--HHHHH
T ss_pred EEEeCCCCCCCHH-HHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHH--HHHcC
Confidence 9999999999999 7999999999999999999999999999999999999 56543
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=99.97 E-value=1.4e-29 Score=236.86 Aligned_cols=252 Identities=10% Similarity=0.074 Sum_probs=161.0
Q ss_pred ccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC-------ChHHHHHH
Q 012190 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT-------PFEGLVKF 227 (468)
Q Consensus 156 ~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S-------s~~~~~~d 227 (468)
+.+.||.. ++|.+.|+ +|+|||+||++++...|..+++.| .++|+|+++|+||||.| +++++++|
T Consensus 3 ~~t~dG~~---l~y~~~G~----g~~ivlvHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~d 75 (274)
T d1a8qa_ 3 CTTRDGVE---IFYKDWGQ----GRPVVFIHGWPLNGDAWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWDGYDFDTFADD 75 (274)
T ss_dssp EECTTSCE---EEEEEECS----SSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHH
T ss_pred EECcCCCE---EEEEEECC----CCeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEeCCCCcccccccccccchhhHHH
Confidence 34667765 57777786 688999999999999999999988 67899999999999998 47889999
Q ss_pred HHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHh-CCCCceEEEEeCCCCCCCCCCcC----cchHHHhhCchhHHh--
Q 012190 228 VEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR-NPTIDLILILSNPATSFGRSQLQ----PLFPILKAMPDELHC-- 300 (468)
Q Consensus 228 l~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~-~P~~v~~lVli~p~~~~~~~~~~----~~~~~~~~~~~~~~~-- 300 (468)
+.++++++ ..++++++||||||.+++.++++ +|+++++++++++.......... ........+......
T Consensus 76 l~~~l~~l----~~~~~~lvGhS~Gg~~~~~~~a~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (274)
T d1a8qa_ 76 LNDLLTDL----DLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGVLTER 151 (274)
T ss_dssp HHHHHHHT----TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHh----hhhhhcccccccccchHHHHHHHhhhccceeEEEEeccCccchhhhhccchhhHHHHHHHHhhhhhhh
Confidence 99999984 45699999999999999887665 58999999999976533222111 111111110000000
Q ss_pred --hHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHH-hHHHhhhccc
Q 012190 301 --AVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSA-SAYANSRLHA 377 (468)
Q Consensus 301 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~l~~ 377 (468)
............. ........ .....+... ................ .......+.+
T Consensus 152 ~~~~~~~~~~~~~~~------~~~~~~~~-~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~l~~ 210 (274)
T d1a8qa_ 152 SQFWKDTAEGFFSAN------RPGNKVTQ-GNKDAFWYM--------------AMAQTIEGGVRCVDAFGYTDFTEDLKK 210 (274)
T ss_dssp HHHHHHHHHHHTTTT------STTCCCCH-HHHHHHHHH--------------HTTSCHHHHHHHHHHHHHCCCHHHHTT
T ss_pred HHHhhhhhhhhhhcc------ccchhhhh-hHHHHHHHh--------------hhccchhhhhhHHHHhhccchHHHHHh
Confidence 0000000000000 00000000 000000000 0000111111111111 1112346788
Q ss_pred CCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccc--cCcHHHHHHHHhcCcccc
Q 012190 378 VKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLL--EEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 378 i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~--e~p~~~~~~I~~~~F~~r 441 (468)
+++|+|+|+|++|.+++.+...+.+.+.+|++++++++++||++++ ++|+++++.|. +|++|
T Consensus 211 i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~~~~~p~~~~~~i~--~FL~k 274 (274)
T d1a8qa_ 211 FDIPTLVVHGDDDQVVPIDATGRKSAQIIPNAELKVYEGSSHGIAMVPGDKEKFNRDLL--EFLNK 274 (274)
T ss_dssp CCSCEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTTTTSTTHHHHHHHHHH--HHHTC
T ss_pred ccceeeeeccCCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCcccccccCHHHHHHHHH--HHHCc
Confidence 9999999999999999987335678888999999999999999887 67899999998 66654
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.97 E-value=2.3e-30 Score=244.42 Aligned_cols=264 Identities=16% Similarity=0.117 Sum_probs=168.2
Q ss_pred ccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC-------ChHHHHHHH
Q 012190 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------PFEGLVKFV 228 (468)
Q Consensus 156 ~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-------s~~~~~~dl 228 (468)
+++.+|.. ++|...|+ +++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++++
T Consensus 11 ~i~~~g~~---i~y~~~G~--~~~p~lvllHG~~~~~~~~~~~~~~L~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~l 85 (291)
T d1bn7a_ 11 YVEVLGER---MHYVDVGP--RDGTPVLFLHGNPTSSYLWRNIIPHVAPSHRCIAPDLIGMGKSDKPDLDYFFDDHVRYL 85 (291)
T ss_dssp EEEETTEE---EEEEEESC--SSSSCEEEECCTTCCGGGGTTTHHHHTTTSCEEEECCTTSTTSCCCSCCCCHHHHHHHH
T ss_pred EEEECCEE---EEEEEeCC--CCCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEEeCCCCccccccccccchhHHHHHH
Confidence 44456655 67888886 3578999999999999999999999999999999999999998 489999999
Q ss_pred HHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchH--HHh-hC-chhHHhhHHH
Q 012190 229 EETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFP--ILK-AM-PDELHCAVPY 304 (468)
Q Consensus 229 ~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~--~~~-~~-~~~~~~~~~~ 304 (468)
.++++++ +.++++|+||||||.+++.+|.++|+++++++++++.............. ... .. ..........
T Consensus 86 ~~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (291)
T d1bn7a_ 86 DAFIEAL----GLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPIPTWDEWPEFARETFQAFRTADVGRELIID 161 (291)
T ss_dssp HHHHHHT----TCCSEEEEEEHHHHHHHHHHHHHCGGGEEEEEEEEECCCBCSGGGSCHHHHHHHHHHTSTTHHHHHHTT
T ss_pred hhhhhhh----ccccccccccccccchhHHHHHhCCcceeeeeeeccccCCccchhhhhhhhhHHHHHhhhhhHHHhhhh
Confidence 9999984 45699999999999999999999999999999988765433222111110 000 00 0000000000
Q ss_pred HhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcc--hhhhhhccCC-cchhHHHHHHHHHHhHHHhhhcccCCce
Q 012190 305 LLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLP--RLSVMSDIIP-KDTLLWKLKLLKSASAYANSRLHAVKAE 381 (468)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~l~~i~~P 381 (468)
.................................. .......... ...... ...........+.++++|
T Consensus 162 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~i~~P 232 (291)
T d1bn7a_ 162 -----QNAFIEGVLPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNEIPIAGEPAN----IVALVEAYMNWLHQSPVP 232 (291)
T ss_dssp -----SCHHHHTHHHHTCSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHH----HHHHHHHHHHHHHHCCSC
T ss_pred -----hhhhHHhhhhhhccccchHHHHHHHHHHhcchhhhHHHHHHHHHhhhhhhhch----hhhhhhhhhhhhhcCCCC
Confidence 0000000000000111111101111111000000 0000000000 000000 000111112345788999
Q ss_pred EEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 382 VLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 382 vLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
+|+|+|++|.++|++ ..+++.+.++++++++++++||++++|+|+++++.|. +|+.
T Consensus 233 ~lii~G~~D~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~--~fL~ 288 (291)
T d1bn7a_ 233 KLLFWGTPGVLIPPA-EAARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIA--RWLP 288 (291)
T ss_dssp EEEEEEEECSSSCHH-HHHHHHHHSTTEEEEEEEEESSCGGGTCHHHHHHHHH--HHSG
T ss_pred EEEEEeCCCCCcCHH-HHHHHHHHCCCCEEEEECCCCCchHHhCHHHHHHHHH--HHHH
Confidence 999999999999999 7999999999999999999999999999999999999 5554
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Probab=99.96 E-value=1.5e-29 Score=239.81 Aligned_cols=255 Identities=15% Similarity=0.088 Sum_probs=159.7
Q ss_pred eeecCCCCCCCCCCeEEEeCCCCCchhhHH-HhHhhh-cCCeEEEEecCCCCCCC----------ChHHHHHHHHHHHHH
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLI-LHHKPL-GKAFEVRCLHIPVYDRT----------PFEGLVKFVEETVRR 234 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~-~~~~~L-~~~~~V~~~D~~G~G~S----------s~~~~~~dl~~~i~~ 234 (468)
++|.+.|++ ++|+|||+||++++...|. .+.+.| .++|+|+++|+||||+| +++++++|+..++++
T Consensus 12 i~y~~~G~~--~~p~vvl~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~d~~~ll~~ 89 (297)
T d1q0ra_ 12 LWSDDFGDP--ADPALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHPYGFGELAADAVAVLDG 89 (297)
T ss_dssp EEEEEESCT--TSCEEEEECCTTCCGGGSCHHHHHHHHTTTCEEEEECCTTSTTSCCCCTTTSCCCHHHHHHHHHHHHHH
T ss_pred EEEEEecCC--CCCEEEEECCCCcChhHHHHHHHHHHHhCCCEEEEEeCCCCcccccccccccccccchhhhhhcccccc
Confidence 688888863 6889999999999999885 466777 67899999999999988 388999999999998
Q ss_pred HhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCc------hhHHhhHHHHhhh
Q 012190 235 EHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMP------DELHCAVPYLLSY 308 (468)
Q Consensus 235 ~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 308 (468)
+ +.++++++||||||.+++.+|.++|++|+++|++++.......... ......... .........+...
T Consensus 90 l----~~~~~~lvGhS~Gg~~a~~~a~~~P~~v~~lvli~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (297)
T d1q0ra_ 90 W----GVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDAN-IERVMRGEPTLDGLPGPQQPFLDALALM 164 (297)
T ss_dssp T----TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHH-HHHHHHTCCCSSCSCCCCHHHHHHHHHH
T ss_pred c----cccceeeccccccchhhhhhhcccccceeeeEEEccccccccchhh-hHHHhhhhhhhhhhhhhhHHHHHHHHHh
Confidence 4 4558999999999999999999999999999999886532211000 000000000 0000000000000
Q ss_pred h--cCChhhH---------HHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhccc
Q 012190 309 V--MGDPIKM---------AMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHA 377 (468)
Q Consensus 309 ~--~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ 377 (468)
. ....... ........................... .......... ...........+.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~--~~~~~~~~~~~l~~ 234 (297)
T d1q0ra_ 165 NQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGG--------VLAEPYAHYS--LTLPPPSRAAELRE 234 (297)
T ss_dssp HSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTT--------CCSCCCGGGG--CCCCCGGGGGGGGG
T ss_pred ccccchhhHHHHHHHHHHhhhccccccchHHHHHHHHHHhhhhccc--------cchhhhhhhh--hhhccccchhhhhc
Confidence 0 0000000 000000000000000000000000000 0000000000 00000112346688
Q ss_pred CCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 378 VKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 378 i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
+++|+++|+|++|.+++++ ..+.+.+.+|++++++++++||++++|+|+++++.|. .|++.
T Consensus 235 i~~Pvlvi~G~~D~~~~~~-~~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~~~~~i~--~~l~~ 295 (297)
T d1q0ra_ 235 VTVPTLVIQAEHDPIAPAP-HGKHLAGLIPTARLAEIPGMGHALPSSVHGPLAEVIL--AHTRS 295 (297)
T ss_dssp CCSCEEEEEETTCSSSCTT-HHHHHHHTSTTEEEEEETTCCSSCCGGGHHHHHHHHH--HHHHH
T ss_pred cCCceEEEEeCCCCCCCHH-HHHHHHHhCCCCEEEEECCCCCcchhhCHHHHHHHHH--HHHHh
Confidence 9999999999999999999 7999999999999999999999999999999999999 66664
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.96 E-value=2.1e-29 Score=235.39 Aligned_cols=252 Identities=17% Similarity=0.169 Sum_probs=163.9
Q ss_pred ccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchh---hHHHhHhhhcCCeEEEEecCCCCCCCC--------hHHH
Q 012190 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGL---GLILHHKPLGKAFEVRCLHIPVYDRTP--------FEGL 224 (468)
Q Consensus 156 ~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~---~~~~~~~~L~~~~~V~~~D~~G~G~Ss--------~~~~ 224 (468)
.++.+|.. ++|.+.|+ +|+|||+||++++.. .|..+++.|+++|+|+++|+||||.|+ .+++
T Consensus 7 ~i~~~G~~---~~Y~~~G~----G~pvvllHG~~~~~~~~~~~~~~~~~l~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~ 79 (271)
T d1uk8a_ 7 SILAAGVL---TNYHDVGE----GQPVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFTDRPENYNYSKDSW 79 (271)
T ss_dssp EEEETTEE---EEEEEECC----SSEEEEECCCSTTCCHHHHHTTTHHHHTTTSEEEEECCTTSTTSCCCTTCCCCHHHH
T ss_pred EEEECCEE---EEEEEEee----CCeEEEECCCCCCccHHHHHHHHHHHHhCCCEEEEEeCCCCCCcccccccccccccc
Confidence 34556665 68888887 789999999986654 466788999899999999999999983 6888
Q ss_pred HHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHH
Q 012190 225 VKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPY 304 (468)
Q Consensus 225 ~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (468)
++++..++++ .+.++++|+||||||.+++.+|.++|+++.++|++++......... .........+. ... ...
T Consensus 80 ~~~~~~~~~~----l~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~lil~~~~~~~~~~~~-~~~~~~~~~~~-~~~-~~~ 152 (271)
T d1uk8a_ 80 VDHIIGIMDA----LEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTE-GLNAVWGYTPS-IEN-MRN 152 (271)
T ss_dssp HHHHHHHHHH----TTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCSCCCCCH-HHHHHHTCCSC-HHH-HHH
T ss_pred chhhhhhhhh----hcCCCceEeeccccceeehHHHHhhhccchheeecccCCCcccchh-hhhhhhhccch-hHH-HHH
Confidence 8999998888 4556999999999999999999999999999999988653322111 11111111111 000 011
Q ss_pred HhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEE
Q 012190 305 LLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLV 384 (468)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLl 384 (468)
.+......+. ..... ........... .................+ ... .......+.++++|+|+
T Consensus 153 ~~~~~~~~~~---------~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~l~~i~~P~li 216 (271)
T d1uk8a_ 153 LLDIFAYDRS---------LVTDE-LARLRYEASIQ-PGFQESFSSMFPEPRQRW-IDA----LASSDEDIKTLPNETLI 216 (271)
T ss_dssp HHHHHCSCGG---------GCCHH-HHHHHHHHHTS-TTHHHHHHTTSCSSTHHH-HHH----HCCCHHHHTTCCSCEEE
T ss_pred HHHHHhhhcc---------cchhH-HHHHHHhhhhc-hhHHHHHHhhcchhhhhh-hhh----ccccHHHHHhhccceeE
Confidence 1111111100 00000 00000000000 000000001111111111 111 11112456889999999
Q ss_pred EEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 385 LASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 385 I~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
|+|++|.++|++ ..+.+.+.++++++++++++||++++|+|+++++.|. +|++
T Consensus 217 i~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~--~Fl~ 269 (271)
T d1uk8a_ 217 IHGREDQVVPLS-SSLRLGELIDRAQLHVFGRCGHWTQIEQTDRFNRLVV--EFFN 269 (271)
T ss_dssp EEETTCSSSCHH-HHHHHHHHCTTEEEEEESSCCSCHHHHTHHHHHHHHH--HHHH
T ss_pred EecCCCCCcCHH-HHHHHHHhCCCCEEEEECCCCCchHHHCHHHHHHHHH--HHHh
Confidence 999999999999 7999999999999999999999999999999999999 5654
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Probab=99.96 E-value=6e-29 Score=234.56 Aligned_cols=256 Identities=14% Similarity=0.119 Sum_probs=158.4
Q ss_pred CCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC-----------ChHHHHH
Q 012190 158 KPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-----------PFEGLVK 226 (468)
Q Consensus 158 ~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-----------s~~~~~~ 226 (468)
..+|.. ++|.+.|+ +|+|||+||++++...|..+++.|.++|+|+++|+||||.| +++++++
T Consensus 14 ~~~~~~---l~y~~~G~----gp~vv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~a~ 86 (293)
T d1ehya_ 14 QLPDVK---IHYVREGA----GPTLLLLHGWPGFWWEWSKVIGPLAEHYDVIVPDLRGFGDSEKPDLNDLSKYSLDKAAD 86 (293)
T ss_dssp ECSSCE---EEEEEEEC----SSEEEEECCSSCCGGGGHHHHHHHHTTSEEEEECCTTSTTSCCCCTTCGGGGCHHHHHH
T ss_pred EECCEE---EEEEEECC----CCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEecCCcccCCccccccccccccchhhhh
Confidence 334544 57888886 78999999999999999999999988999999999999987 3678899
Q ss_pred HHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHh
Q 012190 227 FVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLL 306 (468)
Q Consensus 227 dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (468)
++.+++++ .+.++++++||||||.+|+.+|.++|+++.++|++++.................. ............
T Consensus 87 ~~~~~~~~----l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 161 (293)
T d1ehya_ 87 DQAALLDA----LGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHES-WYSQFHQLDMAV 161 (293)
T ss_dssp HHHHHHHH----TTCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-----------CC-HHHHHTTCHHHH
T ss_pred HHHhhhhh----cCccccccccccccccchhcccccCccccceeeeeeccCccccchhhhhhhhhhh-hhhhhhccchhh
Confidence 99999988 4556899999999999999999999999999999998653221111100000000 000000000000
Q ss_pred hhhcCChh------hHHHHh--hccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHH-----Hhh
Q 012190 307 SYVMGDPI------KMAMVN--IENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAY-----ANS 373 (468)
Q Consensus 307 ~~~~~~~~------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-----~~~ 373 (468)
........ ...... ...............+. .............+...... ...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (293)
T d1ehya_ 162 EVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDN-------------CMKPDNIHGGFNYYRANIRPDAALWTDL 228 (293)
T ss_dssp HHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHH-------------HTSTTHHHHHHHHHHHHSSSSCCCCCTG
T ss_pred hhhccchhHHHHHHHHhhhhcccccccccHHHHHhhhhc-------------cccchhhhhhhhhhhhccccchhhhhhh
Confidence 00000000 000000 00000000000000000 00111111111111110000 011
Q ss_pred hcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 374 RLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 374 ~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
....+++|+++|+|++|.+++.+...+.+.+..+++++++++++||++++|+|+++++.|+ .|+|
T Consensus 229 ~~~~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~Pe~~~~~I~--~Ffr 293 (293)
T d1ehya_ 229 DHTMSDLPVTMIWGLGDTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMVEKPEIAIDRIK--TAFR 293 (293)
T ss_dssp GGSCBCSCEEEEEECCSSCCTTHHHHHHHHHHBSSEEEEEETTCCSCHHHHCHHHHHHHHH--HHCC
T ss_pred hhhccCCceEEEEeCCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCchHHHCHHHHHHHHH--HhhC
Confidence 2345789999999999999998733455677789999999999999999999999999999 6765
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Probab=99.96 E-value=8.4e-30 Score=236.69 Aligned_cols=245 Identities=16% Similarity=0.173 Sum_probs=154.5
Q ss_pred eecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCC---hHHHHHHHHHHHHHHhhcCCCCcE
Q 012190 168 CPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP---FEGLVKFVEETVRREHASSPEKPI 244 (468)
Q Consensus 168 ~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss---~~~~~~dl~~~i~~~~~~~~~~~i 244 (468)
+|...|+ ++|+|||+||++++...|..+++.|+++|+|+++|+||||.|+ ..++.+.+ +.+.. ...+++
T Consensus 3 ~y~~~G~---g~~~lvllHG~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~d~~-~~~~~----~~~~~~ 74 (256)
T d1m33a_ 3 WWQTKGQ---GNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFGALSLADMA-EAVLQ----QAPDKA 74 (256)
T ss_dssp CEEEECC---CSSEEEEECCTTCCGGGGGGTHHHHHTTSEEEEECCTTSTTCCSCCCCCHHHHH-HHHHT----TSCSSE
T ss_pred EEEEECC---CCCeEEEECCCCCCHHHHHHHHHHHhCCCEEEEEeCCCCCCccccccccccccc-ccccc----ccccce
Confidence 5666676 4688999999999999999999999999999999999999984 22333322 22322 335689
Q ss_pred EEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCC-cCcch-HHHhhCchhHHhhHHHHhhh-hcCChhhHHHHhh
Q 012190 245 YLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQ-LQPLF-PILKAMPDELHCAVPYLLSY-VMGDPIKMAMVNI 321 (468)
Q Consensus 245 ~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 321 (468)
+++||||||.+++.+|.++|+.+++++++++........ +.... .....+...........+.. .....
T Consensus 75 ~l~GhS~Gg~ia~~~a~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 146 (256)
T d1m33a_ 75 IWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLALQT-------- 146 (256)
T ss_dssp EEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHHHTTS--------
T ss_pred eeeecccchHHHHHHHHhCCcccceeeeeecccccccchhhhhhHHHHHHHHHhhhhhhhHHHHHHHhhhhh--------
Confidence 999999999999999999999999999998765433222 11111 11111111111111110000 00000
Q ss_pred ccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHH
Q 012190 322 ENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKR 401 (468)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~ 401 (468)
............+..... .........+......+.. ......+.++++|+++|+|++|.++|++ ..+.
T Consensus 147 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~--~~~~~~l~~i~~P~lii~G~~D~~~p~~-~~~~ 215 (256)
T d1m33a_ 147 MGTETARQDARALKKTVL--------ALPMPEVDVLNGGLEILKT--VDLRQPLQNVSMPFLRLYGYLDGLVPRK-VVPM 215 (256)
T ss_dssp TTSTTHHHHHHHHHHHHH--------TSCCCCHHHHHHHHHHHHH--CCCTTGGGGCCSCEEEEEETTCSSSCGG-GCC-
T ss_pred ccccchhhHHHHHHHhhh--------hcchhhHHHHHhhhhhhcc--cchHHHHHhccCCccccccccCCCCCHH-HHHH
Confidence 000000000111111000 0000001111111111111 1124677889999999999999999998 6889
Q ss_pred HHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 402 LNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 402 l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
+.+.+|++++++++++||++++|+|+++++.|. +|+++
T Consensus 216 l~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~--~fl~~ 253 (256)
T d1m33a_ 216 LDKLWPHSESYIFAKAAHAPFISHPAEFCHLLV--ALKQR 253 (256)
T ss_dssp CTTTCTTCEEEEETTCCSCHHHHSHHHHHHHHH--HHHTT
T ss_pred HHHHCCCCEEEEECCCCCchHHHCHHHHHHHHH--HHHHH
Confidence 999999999999999999999999999999999 67665
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Probab=99.96 E-value=9.2e-29 Score=232.93 Aligned_cols=241 Identities=17% Similarity=0.121 Sum_probs=157.7
Q ss_pred eeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHh----hhcCCeEEEEecCCCCCCCC--------hHHHHHHHHHHHHH
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHK----PLGKAFEVRCLHIPVYDRTP--------FEGLVKFVEETVRR 234 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~----~L~~~~~V~~~D~~G~G~Ss--------~~~~~~dl~~~i~~ 234 (468)
++|.+.|+ +|+|||+||++++...|..+.+ .+.++|+|+++|+||||.|+ ...+++++.+++++
T Consensus 22 i~y~~~G~----G~~ivllHG~~~~~~~~~~~~~~l~~~~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~i~~li~~ 97 (283)
T d2rhwa1 22 IHYNEAGN----GETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDA 97 (283)
T ss_dssp EEEEEECC----SSEEEEECCCSTTCCHHHHHTTTHHHHHHTTCEEEEECCTTSTTSCCCCCSSCHHHHHHHHHHHHHHH
T ss_pred EEEEEEcC----CCeEEEECCCCCChhHHHHHHHHHHHHHHCCCEEEEEeCCCCcccccccccccccchhhhhccccccc
Confidence 67888886 7899999999999988876543 34789999999999999883 45678899999998
Q ss_pred HhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhH----HhhHHHHhhhhc
Q 012190 235 EHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDEL----HCAVPYLLSYVM 310 (468)
Q Consensus 235 ~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 310 (468)
+. .++++++||||||.+|+.+|.++|++++++|+++|..................+.... .......+....
T Consensus 98 l~----~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (283)
T d2rhwa1 98 LD----IDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQVFL 173 (283)
T ss_dssp HT----CCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHHHC
T ss_pred cc----ccccccccccchHHHHHHHHHHhhhhcceEEEeCCCcCCcchhhhhhHHHHHHHHHHhhhhhhhhHHHHHHHhh
Confidence 54 4589999999999999999999999999999999865332221111111111100000 000111111110
Q ss_pred CChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHH-HHHHH--HhHHHhhhcccCCceEEEEEe
Q 012190 311 GDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKL-KLLKS--ASAYANSRLHAVKAEVLVLAS 387 (468)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~--~~~~~~~~l~~i~~PvLlI~G 387 (468)
... ..... .........+.. ......... ..... ........+.++++|+++|+|
T Consensus 174 ~~~---------~~~~~-~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G 231 (283)
T d2rhwa1 174 YDQ---------SLITE-ELLQGRWEAIQR------------QPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWG 231 (283)
T ss_dssp SCG---------GGCCH-HHHHHHHHHHHH------------CHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEE
T ss_pred ccc---------ccCcH-HHHHHHHHHhhh------------hhhhhhhhhhhhhhhhccccchHHHHhhCCCCEEEEEe
Confidence 000 00000 000111000000 000000000 00000 011123567789999999999
Q ss_pred CCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 388 GKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 388 ~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
++|.+++++ ..+.+.+.++++++++++++||++++|+|+++++.|. +|++
T Consensus 232 ~~D~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~FLk 281 (283)
T d2rhwa1 232 RDDRFVPLD-HGLKLLWNIDDARLHVFSKCGHWAQWEHADEFNRLVI--DFLR 281 (283)
T ss_dssp TTCSSSCTH-HHHHHHHHSSSEEEEEESSCCSCHHHHTHHHHHHHHH--HHHH
T ss_pred CCCCCcCHH-HHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHH--HHHh
Confidence 999999999 7999999999999999999999999999999999999 6665
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=2.7e-29 Score=240.78 Aligned_cols=265 Identities=13% Similarity=0.130 Sum_probs=168.4
Q ss_pred ccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC---------ChHHHH
Q 012190 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT---------PFEGLV 225 (468)
Q Consensus 156 ~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S---------s~~~~~ 225 (468)
+...||.. ++|.+.|+ +|+|||+||++++...|..+++.| .++|+|+++|+||||.| ++++++
T Consensus 16 v~~~~g~~---i~y~~~G~----gp~vlllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 88 (322)
T d1zd3a2 16 VTVKPRVR---LHFVELGS----GPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLC 88 (322)
T ss_dssp EEEETTEE---EEEEEECC----SSEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEEECTTSTTSCCCSCGGGGSHHHHH
T ss_pred EEECCCCE---EEEEEEcC----CCeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEeccccccccccccccccccccccc
Confidence 33456654 68888886 789999999999999999999999 56899999999999988 368899
Q ss_pred HHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhh----------Cc
Q 012190 226 KFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKA----------MP 295 (468)
Q Consensus 226 ~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~----------~~ 295 (468)
+++.+++++++ .++++++||||||.+++.+|.++|+++.++|+++++................. .+
T Consensus 89 ~~i~~l~~~l~----~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (322)
T d1zd3a2 89 KEMVTFLDKLG----LSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLYFQEP 164 (322)
T ss_dssp HHHHHHHHHHT----CSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCCCCSSSCHHHHHHTCGGGHHHHHTTST
T ss_pred hhhhhhhhccc----ccccccccccchHHHHHHHHHhCCccccceEEEcccccccccccchhhhhhccchhhhHHhhhcc
Confidence 99999999854 45899999999999999999999999999999997654433322211111100 00
Q ss_pred hhHHh----hHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHH-------
Q 012190 296 DELHC----AVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLL------- 364 (468)
Q Consensus 296 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------- 364 (468)
..... .....+..+...... .........+........ .....................+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (322)
T d1zd3a2 165 GVAEAELEQNLSRTFKSLFRASDE-------SVLSMHKVCEAGGLFVNS--PEEPSLSRMVTEEEIQFYVQQFKKSGFRG 235 (322)
T ss_dssp THHHHHHHHTHHHHHHHHSCCTTS-------CCCCTTSHHHHTSSSTTS--CSSCCCCTTCCHHHHHHHHHHHHHHTTHH
T ss_pred chhhhhhhhhHHHHHHHHhhccch-------hhhhHHHHhhhhcccccc--ccchhhhhhccHHHHHHHHHHHhhccccc
Confidence 00000 000001000000000 000000000000000000 0000000000111111111000
Q ss_pred ---------HHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHh
Q 012190 365 ---------KSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (468)
Q Consensus 365 ---------~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~ 435 (468)
..........+.++++|+|+|+|++|.+++++ ..+.+.+.++++++++++++||++++|+|+++++.|.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~- 313 (322)
T d1zd3a2 236 PLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQ-MSQHMEDWIPHLKRGHIEDCGHWTQMDKPTEVNQILI- 313 (322)
T ss_dssp HHHTTSCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGG-GGTTGGGTCTTCEEEEETTCCSCHHHHSHHHHHHHHH-
T ss_pred ccccccccccccccchhhhcccCCCCEEEEEeCCCCCCCHH-HHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHH-
Confidence 01111123455789999999999999999999 6888999999999999999999999999999999999
Q ss_pred cCcccccC
Q 012190 436 TCKYRRSR 443 (468)
Q Consensus 436 ~~F~~r~~ 443 (468)
+|+..+.
T Consensus 314 -~FL~~~~ 320 (322)
T d1zd3a2 314 -KWLDSDA 320 (322)
T ss_dssp -HHHHHHT
T ss_pred -HHHhhcC
Confidence 6766543
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=99.96 E-value=1.9e-29 Score=236.00 Aligned_cols=249 Identities=12% Similarity=0.100 Sum_probs=155.4
Q ss_pred eeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC-------ChHHHHHHHHHHHHHHhhc
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHAS 238 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S-------s~~~~~~dl~~~i~~~~~~ 238 (468)
++|.+.|+ +|+|||+||++++...|..+++.| .++|+|+++|+||||.| +++++++|+.+++++++
T Consensus 15 i~y~~~G~----G~~ivllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~~l~~l~-- 88 (277)
T d1brta_ 15 LYYEDHGT----GQPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNTVLETLD-- 88 (277)
T ss_dssp EEEEEECS----SSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHHT--
T ss_pred EEEEEEcc----CCeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCCCcccccccccchhhhhhhhhhhhhccC--
Confidence 46777886 789999999999999999999888 67899999999999998 48999999999999864
Q ss_pred CCCCcEEEEEeChhH-HHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcc-----hHHHhhCchhHHhhHHHHhhhhcCC
Q 012190 239 SPEKPIYLVGDSFGG-CLALAVAARNPTIDLILILSNPATSFGRSQLQPL-----FPILKAMPDELHCAVPYLLSYVMGD 312 (468)
Q Consensus 239 ~~~~~i~LvGhS~GG-~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (468)
.++++|+|||||| .++..+|.++|++|+++|++++............ ......+..................
T Consensus 89 --~~~~~lvGhS~G~~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (277)
T d1brta_ 89 --LQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFND 166 (277)
T ss_dssp --CCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred --cccccccccccchhhhhHHHHHhhhcccceEEEecCCCcccccchhhhhhhhhhhHHHHHHHhhhccchhhhhhcccc
Confidence 4589999999996 5566678888999999999987653322111100 0011100000000000000000000
Q ss_pred hhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCC
Q 012190 313 PIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNM 392 (468)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~ 392 (468)
... ........... ....... .........................+.++++|+++|+|++|.+
T Consensus 167 ~~~-~~~~~~~~~~~-----~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~ 230 (277)
T d1brta_ 167 FYN-LDENLGTRISE-----EAVRNSW----------NTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRT 230 (277)
T ss_dssp HTT-HHHHBTTTBCH-----HHHHHHH----------HHHHHSCHHHHHHGGGGTTCCCTTTGGGCCSCEEEEEETTCSS
T ss_pred ccc-cchhhhhhhhH-----HHhhhhh----------cccchhhhhhhhhhhhhhhhhHHHHHHhcCccceeEeecCCCC
Confidence 000 00000000000 0000000 0000000000000000000112345678899999999999999
Q ss_pred CCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 393 LPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 393 v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
++++...+.+.+.++++++++++++||++++|+|+++++.|. +|+.|
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fL~k 277 (277)
T d1brta_ 231 LPIENTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTALL--AFLAK 277 (277)
T ss_dssp SCGGGTHHHHHHHCTTSEEEEETTCCTTHHHHTHHHHHHHHH--HHHHC
T ss_pred cCHHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHH--HHHCc
Confidence 998733566778899999999999999999999999999999 56543
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Probab=99.96 E-value=6.5e-29 Score=232.10 Aligned_cols=260 Identities=15% Similarity=0.096 Sum_probs=162.9
Q ss_pred CccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC-------ChHHHHH
Q 012190 155 EIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT-------PFEGLVK 226 (468)
Q Consensus 155 ~~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S-------s~~~~~~ 226 (468)
++.+.||.. ++|...|. +++|+|||+||++++...|..+++.| +++|+|+++|+||||.| +++++++
T Consensus 2 ~i~~~dG~~---l~y~~~G~--~~~~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~ 76 (275)
T d1a88a_ 2 TVTTSDGTN---IFYKDWGP--RDGLPVVFHHGWPLSADDWDNQMLFFLSHGYRVIAHDRRGHGRSDQPSTGHDMDTYAA 76 (275)
T ss_dssp EEECTTSCE---EEEEEESC--TTSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHH
T ss_pred EEEecCCCE---EEEEEecC--CCCCeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEeccccccccccccccccccccc
Confidence 356778866 67777775 35789999999999999999999988 78899999999999988 4889999
Q ss_pred HHHHHHHHHhhcCCCCcEEEEEeCh-hHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcc----hHHHhhCchhHHhh
Q 012190 227 FVEETVRREHASSPEKPIYLVGDSF-GGCLALAVAARNPTIDLILILSNPATSFGRSQLQPL----FPILKAMPDELHCA 301 (468)
Q Consensus 227 dl~~~i~~~~~~~~~~~i~LvGhS~-GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~----~~~~~~~~~~~~~~ 301 (468)
++.++++++. .++++++|||+ ||.+++.+|.++|++|.++|++++............ ......+.......
T Consensus 77 ~~~~~l~~l~----~~~~~~vg~s~~G~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (275)
T d1a88a_ 77 DVAALTEALD----LRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAAN 152 (275)
T ss_dssp HHHHHHHHHT----CCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHHC
T ss_pred cccccccccc----ccccccccccccccchhhcccccCcchhhhhhhhcccccccccchhhhhhhhhhhhhhhhhhhhhh
Confidence 9999999854 34788999997 566777788999999999999997653322211110 01111100000000
Q ss_pred HHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCce
Q 012190 302 VPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAE 381 (468)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~P 381 (468)
....+......+... . ....... .+...+.... .... ............+. .......+.++++|
T Consensus 153 ~~~~~~~~~~~~~~~-~-~~~~~~~----~~~~~~~~~~-----~~~~--~~~~~~~~~~~~~~--~~~~~~~l~~i~~P 217 (275)
T d1a88a_ 153 RAQFYIDVPSGPFYG-F-NREGATV----SQGLIDHWWL-----QGMM--GAANAHYECIAAFS--ETDFTDDLKRIDVP 217 (275)
T ss_dssp HHHHHHHHHHTTTTT-T-TSTTCCC----CHHHHHHHHH-----HHHH--SCHHHHHHHHHHHH--HCCCHHHHHHCCSC
T ss_pred hHHHHHhhhhhhhhh-c-ccchhhH----HHHHHHHHHH-----hhcc--cchHHHHHHHHHhh--hhhhhHHHHhhccc
Confidence 000000000000000 0 0000000 0000000000 0000 00000000000111 11112456789999
Q ss_pred EEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 382 VLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 382 vLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
+|+|+|++|.++|.....+.+.+.+|++++++++++||++++|+|+++++.|. +|++
T Consensus 218 ~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~Fl~ 274 (275)
T d1a88a_ 218 VLVAHGTDDQVVPYADAAPKSAELLANATLKSYEGLPHGMLSTHPEVLNPDLL--AFVK 274 (275)
T ss_dssp EEEEEETTCSSSCSTTTHHHHHHHSTTEEEEEETTCCTTHHHHCHHHHHHHHH--HHHH
T ss_pred cceeecCCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHH--HHHc
Confidence 99999999999987623567788899999999999999999999999999999 5654
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Probab=99.96 E-value=1.1e-28 Score=231.28 Aligned_cols=251 Identities=14% Similarity=0.115 Sum_probs=155.7
Q ss_pred eeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC-------ChHHHHHHHHHHHHHHhhc
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHAS 238 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S-------s~~~~~~dl~~~i~~~~~~ 238 (468)
++|...|+ +|+|||+||++++...|..+++.| .++|+|+++|+||||.| +++++++|+.++++++.
T Consensus 15 i~y~~~G~----g~~illlHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~di~~~i~~l~-- 88 (279)
T d1hkha_ 15 LYYEDQGS----GQPVVLIHGYPLDGHSWERQTRELLAQGYRVITYDRRGFGGSSKVNTGYDYDTFAADLHTVLETLD-- 88 (279)
T ss_dssp EEEEEESS----SEEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHHT--
T ss_pred EEEEEEcc----CCeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEechhhCCccccccccchhhhhhhhhhhhhhcC--
Confidence 56778886 789999999999999999999877 88999999999999998 48999999999999854
Q ss_pred CCCCcEEEEEeChhH-HHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcc----hHHHhhCchhHHhhHHHHhhhhcCCh
Q 012190 239 SPEKPIYLVGDSFGG-CLALAVAARNPTIDLILILSNPATSFGRSQLQPL----FPILKAMPDELHCAVPYLLSYVMGDP 313 (468)
Q Consensus 239 ~~~~~i~LvGhS~GG-~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (468)
.++++|+|||||| .++..+|..+|++|.++|++++............ ......+..........++.......
T Consensus 89 --~~~~~lvGhS~Gg~~~a~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (279)
T d1hkha_ 89 --LRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDFYKNF 166 (279)
T ss_dssp --CCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred --cCccccccccccccchhhhhccccccccceeEEeeccCCccccchhhhhhhhHHHHHHHHHhhhhhhhhhhhhhhhhh
Confidence 4589999999996 5666677788999999999987653322211110 01111100000000000000000000
Q ss_pred hhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCC
Q 012190 314 IKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNML 393 (468)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v 393 (468)
.. ............. ......... .................. ....+.+..+++|+++|+|++|.++
T Consensus 167 ~~-~~~~~~~~~~~~~-~~~~~~~~~----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~l~i~G~~D~~~ 233 (279)
T d1hkha_ 167 YN-LDENLGSRISEQA-VTGSWNVAI----------GSAPVAAYAVVPAWIEDF-RSDVEAVRAAGKPTLILHGTKDNIL 233 (279)
T ss_dssp HT-HHHHBTTTBCHHH-HHHHHHHHH----------TSCTTHHHHTHHHHTCBC-HHHHHHHHHHCCCEEEEEETTCSSS
T ss_pred cc-cchhhhhhhhhhh-hhhhhhhhc----------ccchhhhhhhhhhhhccc-ccchhhhcccCCceEEEEcCCCCcc
Confidence 00 0000001111100 000000000 000000000000000000 0112345678999999999999999
Q ss_pred CcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 394 PSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 394 ~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
+.+...+.+.+.+|++++++++++||++++|+|+++++.|. +|++
T Consensus 234 ~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~v~~~i~--~fl~ 278 (279)
T d1hkha_ 234 PIDATARRFHQAVPEADYVEVEGAPHGLLWTHADEVNAALK--TFLA 278 (279)
T ss_dssp CTTTTHHHHHHHCTTSEEEEETTCCTTHHHHTHHHHHHHHH--HHHH
T ss_pred CHHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHH--HHHC
Confidence 86534678888999999999999999999999999999999 5654
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.96 E-value=3.6e-28 Score=225.97 Aligned_cols=255 Identities=14% Similarity=0.122 Sum_probs=160.7
Q ss_pred CccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC-------ChHHHHH
Q 012190 155 EIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT-------PFEGLVK 226 (468)
Q Consensus 155 ~~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S-------s~~~~~~ 226 (468)
++++.||.. ++|...|+ +|+|||+||++++...|..+++.| .++|+|+++|+||||.| +++++++
T Consensus 2 ~f~~~dG~~---l~y~~~G~----g~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 74 (271)
T d1va4a_ 2 TFVAKDGTQ---IYFKDWGS----GKPVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYDTFAD 74 (271)
T ss_dssp EEECTTSCE---EEEEEESS----SSEEEEECCTTCCGGGGHHHHHHHHTTTCEEEEECCTTSTTSCCCSSCCSHHHHHH
T ss_pred EEEeECCeE---EEEEEEcC----CCeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEeccccccccccccccccccccc
Confidence 466778876 57777786 678999999999999999999999 56899999999999988 4899999
Q ss_pred HHHHHHHHHhhcCCCCcEEEEEeChhHHHHH-HHHHhCCCCceEEEEeCCCCCCCCCCc--Ccc--hHHHhhCchhHHhh
Q 012190 227 FVEETVRREHASSPEKPIYLVGDSFGGCLAL-AVAARNPTIDLILILSNPATSFGRSQL--QPL--FPILKAMPDELHCA 301 (468)
Q Consensus 227 dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~-~~a~~~P~~v~~lVli~p~~~~~~~~~--~~~--~~~~~~~~~~~~~~ 301 (468)
++.++++++. .++++++|||+||.+++ .+|.++|+++.+++++++......... ... ..............
T Consensus 75 ~~~~~~~~~~----~~~~~~vg~s~gG~~~~~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (271)
T d1va4a_ 75 DIAQLIEHLD----LKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLKD 150 (271)
T ss_dssp HHHHHHHHHT----CCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHHH
T ss_pred cceeeeeecC----CCcceeeccccccccccccccccccceeeEEEeecccccccccchhhhhhhhhhHHHHHHHHhhhh
Confidence 9999999854 45889999999887654 566778999999999987653322111 100 01111000000000
Q ss_pred HHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHH-hHHHhhhcccCCc
Q 012190 302 VPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSA-SAYANSRLHAVKA 380 (468)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~l~~i~~ 380 (468)
......... ....................... ............+... .......+.++++
T Consensus 151 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 212 (271)
T d1va4a_ 151 RAQFISDFN----APFYGINKGQVVSQGVQTQTLQI--------------ALLASLKATVDCVTAFAETDFRPDMAKIDV 212 (271)
T ss_dssp HHHHHHHHH----HHHHTGGGTCCCCHHHHHHHHHH--------------HHHSCHHHHHHHHHHHHHCCCHHHHHHCCS
T ss_pred hhhhhhhhc----chhhcccchhhhhhhHHHHHHhh--------------hhhhhhhhhhhcccccchhhhhhhhhhccc
Confidence 000000000 00000000000000000000000 0000001111111110 1111345678899
Q ss_pred eEEEEEeCCCCCCCcHHHHHHH-HHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 381 EVLVLASGKDNMLPSEDEAKRL-NNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 381 PvLlI~G~~D~~v~~~~~~~~l-~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
|+++|+|++|.+++++ ...++ .+.++++++++++++||++++|+|+++++.|. +|++|
T Consensus 213 Pvl~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~--~fL~k 271 (271)
T d1va4a_ 213 PTLVIHGDGDQIVPFE-TTGKVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDLL--AFLKR 271 (271)
T ss_dssp CEEEEEETTCSSSCGG-GTHHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHHH--HHHTC
T ss_pred ceeecccCCCCCCCHH-HHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHH--HHHCc
Confidence 9999999999999988 45554 56778999999999999999999999999999 67664
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.96 E-value=8.2e-29 Score=232.51 Aligned_cols=265 Identities=17% Similarity=0.185 Sum_probs=158.9
Q ss_pred ccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC--------ChHHHHH
Q 012190 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT--------PFEGLVK 226 (468)
Q Consensus 156 ~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S--------s~~~~~~ 226 (468)
++..+|.. ++|...|.+ .++|+|||+||++++...|...+..+ .++|+|+++|+||||.| +++++++
T Consensus 6 ~~~~~g~~---i~y~~~g~~-~~~~~iv~lHG~~g~~~~~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 81 (290)
T d1mtza_ 6 YAKVNGIY---IYYKLCKAP-EEKAKLMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRSEEPDQSKFTIDYGVE 81 (290)
T ss_dssp EEEETTEE---EEEEEECCS-SCSEEEEEECCTTTCCSGGGGGGGGGGGGTEEEEEECCTTSTTSCCCCGGGCSHHHHHH
T ss_pred eEEECCEE---EEEEEcCCC-CCCCeEEEECCCCCchHHHHHHHHHHHHCCCEEEEEeCCCCccccccccccccccchhh
Confidence 44456655 466667764 35678999999988877777777666 67899999999999998 3788999
Q ss_pred HHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHh
Q 012190 227 FVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLL 306 (468)
Q Consensus 227 dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (468)
++.++++++. +.++++|+||||||.+|+.+|.++|++|+++|++++........ ......................
T Consensus 82 ~l~~ll~~l~---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 157 (290)
T d1mtza_ 82 EAEALRSKLF---GNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTV-KEMNRLIDELPAKYRDAIKKYG 157 (290)
T ss_dssp HHHHHHHHHH---TTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHH-HHHHHHHHTSCHHHHHHHHHHH
T ss_pred hhhhhhcccc---cccccceecccccchhhhhhhhcChhhheeeeecccccCcccch-hhhhhhhhhhhHHHHHHHHHhh
Confidence 9999998853 34589999999999999999999999999999998755221100 0000111111111111110000
Q ss_pred hh-hcCChhhH-H----HHhh--ccCCChhHHhhhhhhhc-chhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhccc
Q 012190 307 SY-VMGDPIKM-A----MVNI--ENRLPPRIKLEQLSNNL-PALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHA 377 (468)
Q Consensus 307 ~~-~~~~~~~~-~----~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ 377 (468)
.. ....+... . .... ............+.... .................. .........+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~ 228 (290)
T d1mtza_ 158 SSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGT---------IKDWDITDKISA 228 (290)
T ss_dssp HHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBCCST---------TTTCBCTTTGGG
T ss_pred hhccccchhHHHHHHHHhhhhhcccccchHHHHHHHHHHhhhhhhhhhcchhHHhHhhh---------hhcccHHHHhhc
Confidence 00 00000000 0 0000 00000000000000000 000000000000000000 000001245577
Q ss_pred CCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 378 VKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 378 i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
+++|+++|+|++|.++| + ..+.+.+.++++++++++++||++++|+|+++++.|. +|+.+
T Consensus 229 i~~P~l~i~G~~D~~~~-~-~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~--~FL~~ 288 (290)
T d1mtza_ 229 IKIPTLITVGEYDEVTP-N-VARVIHEKIAGSELHVFRDCSHLTMWEDREGYNKLLS--DFILK 288 (290)
T ss_dssp CCSCEEEEEETTCSSCH-H-HHHHHHHHSTTCEEEEETTCCSCHHHHSHHHHHHHHH--HHHHT
T ss_pred ccceEEEEEeCCCCCCH-H-HHHHHHHHCCCCEEEEECCCCCchHHhCHHHHHHHHH--HHHHH
Confidence 89999999999998765 5 5889999999999999999999999999999999999 66655
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.96 E-value=1.2e-28 Score=235.75 Aligned_cols=255 Identities=14% Similarity=0.093 Sum_probs=161.4
Q ss_pred eeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC---------ChHHHHHHHHHHHHHHh
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT---------PFEGLVKFVEETVRREH 236 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S---------s~~~~~~dl~~~i~~~~ 236 (468)
++|.+.|++ ++.|+|||+||+++++..|..++..| ..+|+|+++|+||||.| +++++++++.+++++++
T Consensus 36 ~~y~~~G~~-~~~p~llllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~ 114 (310)
T d1b6ga_ 36 AHYLDEGNS-DAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEEDYTFEFHRNFLLALIERLD 114 (310)
T ss_dssp EEEEEEECT-TCSCEEEECCCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCEESCGGGCCHHHHHHHHHHHHHHHT
T ss_pred EEEEEecCC-CCCCEEEEECCCCCchHHHHHHHHHhhccCceEEEeeecCccccccccccccccccccccchhhhhhhcc
Confidence 577777763 45788999999999999999999998 57899999999999998 47899999999999854
Q ss_pred hcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhH
Q 012190 237 ASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKM 316 (468)
Q Consensus 237 ~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
.++++|+||||||.+|+.+|+++|++|+++|+++++........................ +..............
T Consensus 115 ----~~~~~lvGhS~Gg~ia~~~A~~~P~~V~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 189 (310)
T d1b6ga_ 115 ----LRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQPAFSAFVTQPADGFTA-WKYDLVTPSDLRLDQ 189 (310)
T ss_dssp ----CCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHHHTTTSSTTTHHH-HHHHHHSCSSCCHHH
T ss_pred ----ccccccccceecccccccchhhhccccceEEEEcCccCCCcccchhHHHHhhcchhhhhh-hhhhhccchhhhhhh
Confidence 459999999999999999999999999999999987643322221111111111111000 000000000000000
Q ss_pred HHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHH-------HHHHHHhHHHhhhcccCCceEEEEEeCC
Q 012190 317 AMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKL-------KLLKSASAYANSRLHAVKAEVLVLASGK 389 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~~~~~~l~~i~~PvLlI~G~~ 389 (468)
............. ...+...+.... .......+.. .............+..+++|+++++|++
T Consensus 190 ~~~~~~~~~~~~~-~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~ 259 (310)
T d1b6ga_ 190 FMKRWAPTLTEAE-ASAYAAPFPDTS---------YQAGVRKFPKMVAQRDQACIDISTEAISFWQNDWNGQTFMAIGMK 259 (310)
T ss_dssp HHHHHSTTCCHHH-HHHHHTTCSSGG---------GCHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTCCSEEEEEEETT
T ss_pred hhhccCccccHHH-HHHHHhhcchhh---------hhhcchhhhhhhhhhhhhhhhhhhhhhHHhhcccCCCeEEEEeCC
Confidence 0001111111110 111111000000 0000000000 0000001111223467899999999999
Q ss_pred CCCCCcHHHHHHHHHhCCCc-EEEEeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 390 DNMLPSEDEAKRLNNSLQNC-IVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 390 D~~v~~~~~~~~l~~~l~~~-~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
|.+++++ ..+.+.+.+++. ++++++++||++++|.|+.+++.|+ .|++
T Consensus 260 D~~~~~~-~~~~~~~~~~~~~~~~~i~~~GH~~~~e~pe~v~~~i~--~Fl~ 308 (310)
T d1b6ga_ 260 DKLLGPD-VMYPMKALINGCPEPLEIADAGHFVQEFGEQVAREALK--HFAE 308 (310)
T ss_dssp CSSSSHH-HHHHHHHHSTTCCCCEEETTCCSCGGGGHHHHHHHHHH--HHHH
T ss_pred CCCCCHH-HHHHHHHhcCCCccEEEECCCcCchhhhCHHHHHHHHH--HHHh
Confidence 9999999 789999999875 7888999999999999999999999 5654
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.95 E-value=1.1e-27 Score=223.31 Aligned_cols=257 Identities=11% Similarity=0.043 Sum_probs=160.1
Q ss_pred CccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC-------ChHHHHH
Q 012190 155 EIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT-------PFEGLVK 226 (468)
Q Consensus 155 ~~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S-------s~~~~~~ 226 (468)
++.+.||.. ++|...|+ +|+|||+||++++...|..+++.| .++|+|+++|+||||.| +++++++
T Consensus 2 ~f~~~dG~~---i~y~~~G~----g~pvvllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 74 (273)
T d1a8sa_ 2 TFTTRDGTQ---IYYKDWGS----GQPIVFSHGWPLNADSWESQMIFLAAQGYRVIAHDRRGHGRSSQPWSGNDMDTYAD 74 (273)
T ss_dssp EEECTTSCE---EEEEEESC----SSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHH
T ss_pred EEEeeCCcE---EEEEEECC----CCeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEechhcCccccccccccccchHH
Confidence 466788876 57788886 788999999999999999999999 67899999999999998 4889999
Q ss_pred HHHHHHHHHhhcCCCCcEEEEEeChhHHHHHH-HHHhCCCCceEEEEeCCCCCCCCCCcCc----chHHHhhCchhHHhh
Q 012190 227 FVEETVRREHASSPEKPIYLVGDSFGGCLALA-VAARNPTIDLILILSNPATSFGRSQLQP----LFPILKAMPDELHCA 301 (468)
Q Consensus 227 dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~-~a~~~P~~v~~lVli~p~~~~~~~~~~~----~~~~~~~~~~~~~~~ 301 (468)
++.++++++ ..++.+++|||+||.+++. +|.++|+++.+++++++........... ...............
T Consensus 75 ~~~~~l~~l----~~~~~~lvg~s~gG~~~~~~~a~~~p~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (273)
T d1a8sa_ 75 DLAQLIEHL----DLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQASLAD 150 (273)
T ss_dssp HHHHHHHHT----TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhc----CccceeeeeeccCCccchhhhhhhhhhccceeEEEecccccccccccccccchhhhhhhHHHHHHHH
Confidence 999999984 4458899999998866555 4556799999999998865432221111 111111100000000
Q ss_pred HHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCce
Q 012190 302 VPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAE 381 (468)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~P 381 (468)
.......+....... . ............+...... ..............+. .......+.++++|
T Consensus 151 ~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~P 215 (273)
T d1a8sa_ 151 RSQLYKDLASGPFFG-F-NQPGAKSSAGMVDWFWLQG-----------MAAGHKNAYDCIKAFS--ETDFTEDLKKIDVP 215 (273)
T ss_dssp HHHHHHHHHHTTSSS-T-TSTTCCCCHHHHHHHHHHH-----------HHSCHHHHHHHHHHHH--HCCCHHHHHTCCSC
T ss_pred HHHHHHHHhhhhhhh-c-ccchhhhhHHHHHHHHHhh-----------cccchhhhhhhHHHhh--hhhhhHHHHhhccc
Confidence 000000000000000 0 0000000000000000000 0000001111111111 11123566889999
Q ss_pred EEEEEeCCCCCCCcHHHHHHHH-HhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 382 VLVLASGKDNMLPSEDEAKRLN-NSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 382 vLlI~G~~D~~v~~~~~~~~l~-~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
+++|+|++|.++|.+ ..+.+. +..+++++++++++||++++|+|+++++.|. +|++
T Consensus 216 vlii~g~~D~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~Fl~ 272 (273)
T d1a8sa_ 216 TLVVHGDADQVVPIE-ASGIASAALVKGSTLKIYSGAPHGLTDTHKDQLNADLL--AFIK 272 (273)
T ss_dssp EEEEEETTCSSSCST-TTHHHHHHHSTTCEEEEETTCCSCHHHHTHHHHHHHHH--HHHH
T ss_pred eEEEecCCCCCCCHH-HHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHH--HHcC
Confidence 999999999999988 455554 5568999999999999999999999999999 5654
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Probab=99.95 E-value=2e-27 Score=228.01 Aligned_cols=263 Identities=13% Similarity=0.055 Sum_probs=156.6
Q ss_pred CccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC---------ChHHHH
Q 012190 155 EIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT---------PFEGLV 225 (468)
Q Consensus 155 ~~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S---------s~~~~~ 225 (468)
.+...||.. ++|.+.|++ ++|+|||+||+++++..|......+.++|+|+++|+||||.| ++++++
T Consensus 15 ~i~~~dg~~---i~y~~~G~~--~g~pvvllHG~~g~~~~~~~~~~~l~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~ 89 (313)
T d1azwa_ 15 SLKVDDRHT---LYFEQCGNP--HGKPVVMLHGGPGGGCNDKMRRFHDPAKYRIVLFDQRGSGRSTPHADLVDNTTWDLV 89 (313)
T ss_dssp EEECSSSCE---EEEEEEECT--TSEEEEEECSTTTTCCCGGGGGGSCTTTEEEEEECCTTSTTSBSTTCCTTCCHHHHH
T ss_pred EEEeCCCcE---EEEEEecCC--CCCEEEEECCCCCCccchHHHhHHhhcCCEEEEEeccccCCCCccccccchhHHHHH
Confidence 344556654 678888863 578899999999998888887777788999999999999999 378999
Q ss_pred HHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCch-hHHhhHHH
Q 012190 226 KFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPD-ELHCAVPY 304 (468)
Q Consensus 226 ~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 304 (468)
+|+.++++++ +.++++|+||||||.+++.+|.++|+++++++++++........ ......... .....+..
T Consensus 90 ~dl~~~~~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 161 (313)
T d1azwa_ 90 ADIERLRTHL----GVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLLRRFEL----EWFYQEGASRLFPDAWEH 161 (313)
T ss_dssp HHHHHHHHHT----TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHH----HHHHTSSHHHHCHHHHHH
T ss_pred HHHHHHHHhh----ccccceeEEecCCcHHHHHHHHHhhhceeeeeEeccccccccch----hhhhhcccchhhhHHHHH
Confidence 9999999994 45689999999999999999999999999999999865332110 000000000 00000000
Q ss_pred Hhhhhc---CChhhHHHHhhccCCChhHHhhhhhhhcchh------cchhhhhhccCCcchhHHHHHHHHHH--------
Q 012190 305 LLSYVM---GDPIKMAMVNIENRLPPRIKLEQLSNNLPAL------LPRLSVMSDIIPKDTLLWKLKLLKSA-------- 367 (468)
Q Consensus 305 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~~-------- 367 (468)
...... ................... .......+... ..........................
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (313)
T d1azwa_ 162 YLNAIPPVERADLMSAFHRRLTSDDEAT-RLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIENHYFVNGGFF 240 (313)
T ss_dssp HHHTSCGGGTTSHHHHHHHHHTCSCHHH-HHHHHHHHHHHHHHTSSSSCCHHHHHHHTCHHHHHHHHHHHHHHHHTGGGC
T ss_pred HHHhhhhhhhhhhhhhhhhhhcCccHHH-HHHHHHhhhhccccccccccchhhhcccchhHHHHHHhHHHHHHHhhcccc
Confidence 000000 0000000000000000000 00000000000 00000000000000000000000000
Q ss_pred ---hHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHH
Q 012190 368 ---SAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIK 434 (468)
Q Consensus 368 ---~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~ 434 (468)
..........+++|+|+|+|++|.++|++ ..+.+.+.+|++++++++++||+++ +|+.+.++|+
T Consensus 241 ~~~~~~~~~~~~~~~~P~lii~G~~D~~~p~~-~~~~l~~~~p~a~~~~i~~aGH~~~--ep~~~~~li~ 307 (313)
T d1azwa_ 241 EVEDQLLRDAHRIADIPGVIVHGRYDVVCPLQ-SAWDLHKAWPKAQLQISPASGHSAF--EPENVDALVR 307 (313)
T ss_dssp SSTTHHHHTGGGGTTCCEEEEEETTCSSSCHH-HHHHHHHHCTTSEEEEETTCCSSTT--SHHHHHHHHH
T ss_pred ccchhhhHhhhhcCCCCEEEEEECCCCCCCHH-HHHHHHHHCCCCEEEEECCCCCCCC--CchHHHHHHH
Confidence 00112345678899999999999999999 7999999999999999999999975 4666666655
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Probab=99.95 E-value=8.6e-28 Score=225.86 Aligned_cols=267 Identities=11% Similarity=-0.022 Sum_probs=157.7
Q ss_pred ccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCC-----------hHHH
Q 012190 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP-----------FEGL 224 (468)
Q Consensus 156 ~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss-----------~~~~ 224 (468)
++..+|.. ++|.+.|+ +|+|||+||++++...|..+++.|+++|+|+++|+||||.|+ ..+.
T Consensus 12 fi~~~g~~---i~y~~~G~----g~~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~ 84 (298)
T d1mj5a_ 12 FIEIKGRR---MAYIDEGT----GDPILFQHGNPTSSYLWRNIMPHCAGLGRLIACDLIGMGDSDKLDPSGPERYAYAEH 84 (298)
T ss_dssp EEEETTEE---EEEEEESC----SSEEEEECCTTCCGGGGTTTGGGGTTSSEEEEECCTTSTTSCCCSSCSTTSSCHHHH
T ss_pred EEEECCEE---EEEEEEcC----CCcEEEECCCCCCHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCCccccccccccchh
Confidence 44556655 67888886 789999999999999999999999999999999999999983 2344
Q ss_pred HHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHH
Q 012190 225 VKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPY 304 (468)
Q Consensus 225 ~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (468)
.+++..++.. ....++++++||||||.+++.+|.++|++|.+++++++.................. ..... ....
T Consensus 85 ~~~~~~~~~~---~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~ 159 (298)
T d1mj5a_ 85 RDYLDALWEA---LDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLF-QAFRS-QAGE 159 (298)
T ss_dssp HHHHHHHHHH---TTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHHHH-HHHHS-TTHH
T ss_pred hhhhcccccc---ccccccCeEEEecccchhHHHHHHHHHhhhheeeccccccccccchhhhhhhhhhh-hhhhh-hhhh
Confidence 4444444443 24566899999999999999999999999999999987653322211111000000 00000 0000
Q ss_pred HhhhhcCChhhHHHHhhc-cCCChhHHhhhhhhhcchhcch----hhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCC
Q 012190 305 LLSYVMGDPIKMAMVNIE-NRLPPRIKLEQLSNNLPALLPR----LSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVK 379 (468)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~ 379 (468)
.................. ....... .............. ............... ...........+..++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 234 (298)
T d1mj5a_ 160 ELVLQDNVFVEQVLPGLILRPLSEAE-MAAYREPFLAAGEARRPTLSWPRQIPIAGTPAD----VVAIARDYAGWLSESP 234 (298)
T ss_dssp HHHTTTCHHHHTHHHHTSSSCCCHHH-HHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHH----HHHHHHHHHHHHTTCC
T ss_pred hhhhhhhhhhhhhccccccccchhhh-hhhhhhhhccchhhhhhhhhhhhhhhhcchhhh----hhhhhhhhhhhhhhcc
Confidence 000000000000000000 0010000 11111100000000 000000000000111 1111112234568899
Q ss_pred ceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccccCC
Q 012190 380 AEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSRK 444 (468)
Q Consensus 380 ~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r~~~ 444 (468)
+|+++++|++|.+.+. ..+.+.+.+|++++++++ +||++++|+|+++++.|. +|+++.++
T Consensus 235 ~P~l~i~g~~d~~~~~--~~~~~~~~~p~~~~~~~~-~GH~~~~e~P~~v~~~i~--~fl~~~~~ 294 (298)
T d1mj5a_ 235 IPKLFINAEPGALTTG--RMRDFCRTWPNQTEITVA-GAHFIQEDSPDEIGAAIA--AFVRRLRP 294 (298)
T ss_dssp SCEEEEEEEECSSSSH--HHHHHHTTCSSEEEEEEE-ESSCGGGTCHHHHHHHHH--HHHHHHSC
T ss_pred eeEEEEecCCCCcChH--HHHHHHHHCCCCEEEEeC-CCCchHHhCHHHHHHHHH--HHHhhhcc
Confidence 9999999999987654 478888999998887665 799999999999999999 78888654
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=99.95 E-value=3.2e-28 Score=223.30 Aligned_cols=245 Identities=12% Similarity=0.042 Sum_probs=149.5
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCCC--------hHHHHHHHHHHHHHHhhcCCCCcEEEEEe
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTP--------FEGLVKFVEETVRREHASSPEKPIYLVGD 249 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss--------~~~~~~dl~~~i~~~~~~~~~~~i~LvGh 249 (468)
+++|||+||+++++..|..+++.| .++|+|+++|+||||.|+ +++++.++..+++.. ...++++++||
T Consensus 2 G~~vvllHG~~~~~~~w~~~~~~L~~~g~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~lvgh 78 (258)
T d1xkla_ 2 GKHFVLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLMELMESL---SADEKVILVGH 78 (258)
T ss_dssp CCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEECCCTTSTTCCCCGGGCCSHHHHHHHHHHHHHTS---CSSSCEEEEEE
T ss_pred CCcEEEECCCCCCHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCCcchHHHHHHHhhhhhcc---ccccccccccc
Confidence 568999999999999999999999 467999999999999983 566777777777653 34568999999
Q ss_pred ChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhH
Q 012190 250 SFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRI 329 (468)
Q Consensus 250 S~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (468)
||||.+++.++.++|+++.++|++++............................. .......... ..........
T Consensus 79 S~Gg~va~~~a~~~p~~~~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~---~~~~~~~~~~ 153 (258)
T d1xkla_ 79 SLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQ--FLPYGSPEEP---LTSMFFGPKF 153 (258)
T ss_dssp TTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCE--EEECSCTTSC---CEEEECCHHH
T ss_pred chhHHHHHHHhhhhccccceEEEecccCCCcccchHHHHHHHhhhhhhhhhhhhh--hhhhhhhhhh---cccccccHHH
Confidence 9999999999999999999999999865333222111111111000000000000 0000000000 0000000000
Q ss_pred HhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCc
Q 012190 330 KLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNC 409 (468)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~ 409 (468)
................... .......... .+. .......+..+++|+++|+|++|.++|++ ..+.+.+.++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~--~~~~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~ 226 (258)
T d1xkla_ 154 LAHKLYQLCSPEDLALASS-LVRPSSLFME---DLS--KAKYFTDERFGSVKRVYIVCTEDKGIPEE-FQRWQIDNIGVT 226 (258)
T ss_dssp HHHHTSTTSCHHHHHHHHH-HCCCBCCCHH---HHH--HCCCCCTTTGGGSCEEEEEETTCTTTTHH-HHHHHHHHHCCS
T ss_pred HHHHhhhcccHHHHHHhhh-hhhhhhhhhh---hhh--hhhhcccccccccceeEeeecCCCCCCHH-HHHHHHHHCCCC
Confidence 0000000000000000000 0000000000 000 00112345678899999999999999999 799999999999
Q ss_pred EEEEeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 410 IVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 410 ~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
++++++++||++++|+|+++++.|. +|.+
T Consensus 227 ~~~~i~~~gH~~~~e~P~~~~~~l~--e~~~ 255 (258)
T d1xkla_ 227 EAIEIKGADHMAMLCEPQKLCASLL--EIAH 255 (258)
T ss_dssp EEEEETTCCSCHHHHSHHHHHHHHH--HHHH
T ss_pred EEEEECCCCCchHHhCHHHHHHHHH--HHHH
Confidence 9999999999999999999999999 4543
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Probab=99.94 E-value=3.6e-27 Score=216.76 Aligned_cols=237 Identities=13% Similarity=0.059 Sum_probs=146.4
Q ss_pred eEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC--------ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeCh
Q 012190 181 TLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSPEKPIYLVGDSF 251 (468)
Q Consensus 181 ~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S--------s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~ 251 (468)
-.||+||+++++..|..+++.| .++|+|+++|+||||.| +++++++++.+++++. ...++++|+||||
T Consensus 4 ~~vliHG~~~~~~~w~~~~~~L~~~g~~Via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~lvGhS~ 80 (256)
T d3c70a1 4 HFVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEAL---PPGEKVILVGESC 80 (256)
T ss_dssp EEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHTHHHHHHHHHS---CTTCCEEEEEETT
T ss_pred cEEEeCCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhhhh---ccccceeecccch
Confidence 4699999999999999999999 56799999999999998 3788899998888763 3456899999999
Q ss_pred hHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchH-HHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHH
Q 012190 252 GGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFP-ILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIK 330 (468)
Q Consensus 252 GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (468)
||.+++.+|.++|++++++|++++.............. .............. ....... . ...........
T Consensus 81 Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~----~~~~~~~~~~~ 152 (256)
T d3c70a1 81 GGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYF---TYTKDGK-E----ITGLKLGFTLL 152 (256)
T ss_dssp HHHHHHHHHHHHGGGEEEEEEESCCCCCSSSCTTHHHHHHHHHSCCCTTCEEE---EEEETTE-E----EEEEECCHHHH
T ss_pred HHHHHHHHhhcCchhhhhhheeccccCCcccchhhHhhhhhhhhhhhhhhHHH---hhhcccc-c----cchhhhhhhhh
Confidence 99999999999999999999999765332222111110 00000000000000 0000000 0 00000000000
Q ss_pred hhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcE
Q 012190 331 LEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCI 410 (468)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~ 410 (468)
.................... ........ .. ...........+++|+++|+|++|.+++++ ..+.+.+.+|+++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~--~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~-~~~~~~~~~p~~~ 225 (256)
T d3c70a1 153 RENLYTLCGPEEYELAKMLT-RKGSLFQN---IL--AKRPFFTKEGYGSIKKIYVWTDQDEIFLPE-FQLWQIENYKPDK 225 (256)
T ss_dssp HHHTSTTSCHHHHHHHHHHC-CCBCCCHH---HH--TTSCCCCTTTGGGSCEEEEECTTCSSSCHH-HHHHHHHHSCCSE
T ss_pred hhhhhhhcchhhHHHhhhhh-hhhhHHHh---hh--hhcchhhhhhccccceeEEeecCCCCCCHH-HHHHHHHHCCCCE
Confidence 00000000000000000000 00000000 00 000001233456899999999999999999 6999999999999
Q ss_pred EEEeCCCCccccccCcHHHHHHHHh
Q 012190 411 VRNFKDNGHTLLLEEGISLLTIIKG 435 (468)
Q Consensus 411 ~~~i~~aGH~~~~e~p~~~~~~I~~ 435 (468)
+++++++||++++|+|+++++.|.+
T Consensus 226 ~~~i~~agH~~~~e~P~~~~~~l~~ 250 (256)
T d3c70a1 226 VYKVEGGDHKLQLTKTKEIAEILQE 250 (256)
T ss_dssp EEECCSCCSCHHHHSHHHHHHHHHH
T ss_pred EEEECCCCCchHHhCHHHHHHHHHH
Confidence 9999999999999999999999984
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Probab=99.94 E-value=5.9e-26 Score=214.42 Aligned_cols=267 Identities=15% Similarity=0.065 Sum_probs=156.6
Q ss_pred ccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCC---------hHHHHH
Q 012190 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP---------FEGLVK 226 (468)
Q Consensus 156 ~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss---------~~~~~~ 226 (468)
+...||.. ++|...|++ ++|+|||+||++++...|..+...|+++|+|+++|+||||.|+ ..++++
T Consensus 16 v~~~dG~~---i~y~~~G~~--~g~pvvllHG~~~~~~~w~~~~~~l~~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~ 90 (313)
T d1wm1a_ 16 LDTGDGHR---IYWELSGNP--NGKPAVFIHGGPGGGISPHHRQLFDPERYKVLLFDQRGCGRSRPHASLDNNTTWHLVA 90 (313)
T ss_dssp EECSSSCE---EEEEEEECT--TSEEEEEECCTTTCCCCGGGGGGSCTTTEEEEEECCTTSTTCBSTTCCTTCSHHHHHH
T ss_pred EEeCCCcE---EEEEEecCC--CCCeEEEECCCCCcccchHHHHHHhhcCCEEEEEeCCCcccccccccccccchhhHHH
Confidence 44557766 678888874 5789999999999999999999999999999999999999983 678888
Q ss_pred HHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHh
Q 012190 227 FVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLL 306 (468)
Q Consensus 227 dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (468)
++..+++. .+..+++++|||+||.+++.+|..+|+++.+++++++...............................
T Consensus 91 d~~~~~~~----~~~~~~~~vg~s~g~~~~~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (313)
T d1wm1a_ 91 DIERLREM----AGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWERVLSIL 166 (313)
T ss_dssp HHHHHHHH----TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSGGGTSHHHHHHHHTTS
T ss_pred HHHhhhhc----cCCCcceeEeeecCCchhhHHHHHHhhhheeeeecccccccccccccccccccchhhhhhhhhhhhhh
Confidence 88888887 45569999999999999999999999999999999876532110000000000000000000000000
Q ss_pred -hhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhh--ccCCcchhHHHHHH--HHH-----------HhHH
Q 012190 307 -SYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMS--DIIPKDTLLWKLKL--LKS-----------ASAY 370 (468)
Q Consensus 307 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~--~~~-----------~~~~ 370 (468)
........... ............................... .............. ... ....
T Consensus 167 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (313)
T d1wm1a_ 167 SDDERKDVIAAY-RQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYFTHLGFLESDDQL 245 (313)
T ss_dssp CTTGGGCHHHHH-HHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHHHHHHHHHHHHHHHHTGGGCSSTTHH
T ss_pred hhhhhhhhhhhh-hhcccchhhhhhhhhhhhhhhhhhhhhhcccchhhhhhhhhhHHhhhhhhhhhhhhhhcccccchhh
Confidence 00000000000 0000000000000000000000000000000 00000000000000 000 0011
Q ss_pred HhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHh
Q 012190 371 ANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (468)
Q Consensus 371 ~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~ 435 (468)
....+..+++|+++|+|++|.++|++ .++.+.+.+|++++++++++||++ ++|+.+.++|+.
T Consensus 246 ~~~~~~~~~~Pvlii~G~~D~~~p~~-~~~~l~~~~p~a~~~~i~~aGH~~--~eP~~~~~lv~a 307 (313)
T d1wm1a_ 246 LRNVPLIRHIPAVIVHGRYDMACQVQ-NAWDLAKAWPEAELHIVEGAGHSY--DEPGILHQLMIA 307 (313)
T ss_dssp HHTGGGGTTSCEEEEEETTCSSSCHH-HHHHHHHHCTTSEEEEETTCCSST--TSHHHHHHHHHH
T ss_pred hhhhhhhCCCCEEEEEECCCCccCHH-HHHHHHHHCCCCEEEEECCCCCCc--CCchHHHHHHHH
Confidence 12445668899999999999999999 799999999999999999999975 468888877764
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=3.3e-27 Score=213.55 Aligned_cols=167 Identities=16% Similarity=0.124 Sum_probs=135.6
Q ss_pred CCCCeEEEeCCCCCchhhHHH--hHhhh-cCCeEEEEecCCCCCCCC---------hHHHHHHHHHHHHHHhhcCCCCcE
Q 012190 177 KGSPTLLFLPGIDGLGLGLIL--HHKPL-GKAFEVRCLHIPVYDRTP---------FEGLVKFVEETVRREHASSPEKPI 244 (468)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~~~--~~~~L-~~~~~V~~~D~~G~G~Ss---------~~~~~~dl~~~i~~~~~~~~~~~i 244 (468)
+++|+|||+||++++...|.. .++.| .++|+|+++|+||||.|+ ..+.++++.++++.+. .+++
T Consensus 29 ~~~~~vvllHG~~~~~~~w~~~~~~~~la~~gy~via~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~~~~l~----~~~~ 104 (208)
T d1imja_ 29 QARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAPAPIGELAPGSFLAAVVDALE----LGPP 104 (208)
T ss_dssp CCSCEEEECCCTTCCHHHHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCCSSCTTSCCCTHHHHHHHHHHT----CCSC
T ss_pred CCCCeEEEECCCCCChhHHhhhHHHHHHHHcCCeEEEeecccccCCCCCCcccccchhhhhhhhhhcccccc----cccc
Confidence 357899999999999999976 45777 667999999999999883 3445677778888754 4588
Q ss_pred EEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccC
Q 012190 245 YLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENR 324 (468)
Q Consensus 245 ~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (468)
+|+||||||.+++.+|.++|++++++|+++|....
T Consensus 105 ~lvG~S~Gg~~a~~~a~~~p~~v~~lV~~~p~~~~--------------------------------------------- 139 (208)
T d1imja_ 105 VVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTD--------------------------------------------- 139 (208)
T ss_dssp EEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGG---------------------------------------------
T ss_pred cccccCcHHHHHHHHHHHhhhhcceeeecCccccc---------------------------------------------
Confidence 99999999999999999999999999999873210
Q ss_pred CChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHH
Q 012190 325 LPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNN 404 (468)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~ 404 (468)
. +. ...+.++++|+|+|+|++|.++|.. . ...+
T Consensus 140 --------~------------------~~------------------~~~~~~i~~P~Lii~G~~D~~~~~~--~-~~~~ 172 (208)
T d1imja_ 140 --------K------------------IN------------------AANYASVKTPALIVYGDQDPMGQTS--F-EHLK 172 (208)
T ss_dssp --------G------------------SC------------------HHHHHTCCSCEEEEEETTCHHHHHH--H-HHHT
T ss_pred --------c------------------cc------------------cccccccccccccccCCcCcCCcHH--H-HHHH
Confidence 0 00 0123678999999999999987754 2 4456
Q ss_pred hCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 405 SLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 405 ~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
.++++++.+++++||..++|+|+++.+.|. +|++.
T Consensus 173 ~~~~~~~~~i~~~gH~~~~~~p~~~~~~l~--~Fl~~ 207 (208)
T d1imja_ 173 QLPNHRVLIMKGAGHPCYLDKPEEWHTGLL--DFLQG 207 (208)
T ss_dssp TSSSEEEEEETTCCTTHHHHCHHHHHHHHH--HHHHT
T ss_pred hCCCCeEEEECCCCCchhhhCHHHHHHHHH--HHHhc
Confidence 789999999999999999999999999999 67653
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Probab=99.92 E-value=6.7e-25 Score=201.54 Aligned_cols=242 Identities=17% Similarity=0.129 Sum_probs=136.7
Q ss_pred eeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhc-CCeEEEEecCCCCCCCCh------HHHHHHHHHHHHHHhhcC
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVYDRTPF------EGLVKFVEETVRREHASS 239 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~-~~~~V~~~D~~G~G~Ss~------~~~~~dl~~~i~~~~~~~ 239 (468)
++|...+. ++|+|||+||++++...|.++++.|. .+|+|+++|+||||.|+. .....+..... .....
T Consensus 7 lh~~~~~~---~~P~ivllHG~~~~~~~~~~~~~~L~~~g~~vi~~Dl~G~G~s~~~~~~~~~~~~~~~~~~~--~~~~~ 81 (264)
T d1r3da_ 7 LHFAKPTA---RTPLVVLVHGLLGSGADWQPVLSHLARTQCAALTLDLPGHGTNPERHCDNFAEAVEMIEQTV--QAHVT 81 (264)
T ss_dssp EESSCCBT---TBCEEEEECCTTCCGGGGHHHHHHHTTSSCEEEEECCTTCSSCC-------CHHHHHHHHHH--HTTCC
T ss_pred EEEcCCCC---CCCeEEEeCCCCCCHHHHHHHHHHHHhCCCEEEEEecccccccccccccccchhhhhhhhcc--ccccc
Confidence 45555443 57899999999999999999999995 579999999999999841 11111111111 11224
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhh-----HHHHhhhhcCChh
Q 012190 240 PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCA-----VPYLLSYVMGDPI 314 (468)
Q Consensus 240 ~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 314 (468)
..++++++||||||.+++.+|+++|+.+.+++++.+.......................... ............
T Consensus 82 ~~~~~~lvGhS~Gg~ia~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 160 (264)
T d1r3da_ 82 SEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVLSDWYQQA- 160 (264)
T ss_dssp TTSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHTTSG-
T ss_pred ccCceeeeeecchHHHHHHHHHhCchhccccccccccCCCccccchhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh-
Confidence 56789999999999999999999999999988876544322211110000000000000000 000000000000
Q ss_pred hHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHH-HhHHHhhhcccCCceEEEEEeCCCCCC
Q 012190 315 KMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKS-ASAYANSRLHAVKAEVLVLASGKDNML 393 (468)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~l~~i~~PvLlI~G~~D~~v 393 (468)
......... ......... ................ ........+..+++|+++|+|++|..
T Consensus 161 ------~~~~~~~~~-~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~l~i~G~~D~~- 221 (264)
T d1r3da_ 161 ------VFSSLNHEQ-RQTLIAQRS-----------ANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSK- 221 (264)
T ss_dssp ------GGTTCCHHH-HHHHHHHHT-----------TSCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHH-
T ss_pred ------hhcccchHH-HHHHHHHHh-----------hhhhhhhHHhhhhccccccccchhhhhccCcceEEEEeCCcHH-
Confidence 000010000 000000000 0000000000000000 00011245578899999999999953
Q ss_pred CcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 394 PSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 394 ~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
...+.+ .+++++++++++||++++|+|+++++.|. +|++.
T Consensus 222 -----~~~~~~-~~~~~~~~i~~~gH~~~~e~P~~~~~~i~--~fl~~ 261 (264)
T d1r3da_ 222 -----FQQLAE-SSGLSYSQVAQAGHNVHHEQPQAFAKIVQ--AMIHS 261 (264)
T ss_dssp -----HHHHHH-HHCSEEEEETTCCSCHHHHCHHHHHHHHH--HHHHH
T ss_pred -----HHHHHh-cCCCeEEEECCCCCchHHHCHHHHHHHHH--HHHHh
Confidence 233333 35899999999999999999999999999 56654
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.91 E-value=3.3e-24 Score=194.16 Aligned_cols=218 Identities=15% Similarity=0.149 Sum_probs=140.6
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCCC-------hHHHHHHHHHHHHHHhhcCCCCcEEEEEeC
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTP-------FEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss-------~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS 250 (468)
+++|||+||++++...|..+++.| .++|+|+++|+||||.|+ ..+..+++..++..... ...++++|+|||
T Consensus 11 ~~~vvliHG~~~~~~~~~~l~~~L~~~G~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~G~S 89 (242)
T d1tqha_ 11 ERAVLLLHGFTGNSADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDVMNGYEFLKN-KGYEKIAVAGLS 89 (242)
T ss_dssp SCEEEEECCTTCCTHHHHHHHHHHHHTTCEEEECCCTTSSSCHHHHTTCCHHHHHHHHHHHHHHHHH-HTCCCEEEEEET
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEeCCCCccccccccccchhHHHHHHHHHHhhhhh-cccCceEEEEcc
Confidence 568999999999999999999999 568999999999999882 44555555555544332 245689999999
Q ss_pred hhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHH
Q 012190 251 FGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIK 330 (468)
Q Consensus 251 ~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (468)
|||.+++.++.++|... +++++++...... .......... ........ .......
T Consensus 90 ~Gg~~~~~~~~~~~~~~--~~~~~~~~~~~~~-----~~~~~~~~~~----~~~~~~~~--------------~~~~~~~ 144 (242)
T d1tqha_ 90 LGGVFSLKLGYTVPIEG--IVTMCAPMYIKSE-----ETMYEGVLEY----AREYKKRE--------------GKSEEQI 144 (242)
T ss_dssp HHHHHHHHHHTTSCCSC--EEEESCCSSCCCH-----HHHHHHHHHH----HHHHHHHH--------------TCCHHHH
T ss_pred hHHHHhhhhcccCcccc--cccccccccccch-----hHHHHHHHHH----HHHHhhhc--------------cchhhhH
Confidence 99999999999998754 5565554432111 0011000000 00000000 0000000
Q ss_pred hhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhC--CC
Q 012190 331 LEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSL--QN 408 (468)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l--~~ 408 (468)
........ . ........ ...........+..+++|+|+++|++|.+++++ ..+.+.+.+ ++
T Consensus 145 ~~~~~~~~-----------~-~~~~~~~~----~~~~~~~~~~~~~~~~~p~lii~g~~D~~~~~~-~~~~~~~~~~~~~ 207 (242)
T d1tqha_ 145 EQEMEKFK-----------Q-TPMKTLKA----LQELIADVRDHLDLIYAPTFVVQARHDEMINPD-SANIIYNEIESPV 207 (242)
T ss_dssp HHHHHHHT-----------T-SCCTTHHH----HHHHHHHHHHTGGGCCSCEEEEEETTCSSSCTT-HHHHHHHHCCCSS
T ss_pred HHHHhhhh-----------h-hccchhhc----ccccccccccccceeccccceeecccCCccCHH-HHHHHHHHcCCCC
Confidence 00000000 0 00000110 011111223566889999999999999999999 799999988 46
Q ss_pred cEEEEeCCCCcccccc-CcHHHHHHHHhcCcccc
Q 012190 409 CIVRNFKDNGHTLLLE-EGISLLTIIKGTCKYRR 441 (468)
Q Consensus 409 ~~~~~i~~aGH~~~~e-~p~~~~~~I~~~~F~~r 441 (468)
+++++++++||++++| +++++.+.|. +|+++
T Consensus 208 ~~~~~~~~~gH~~~~~~~~~~~~~~i~--~Fl~~ 239 (242)
T d1tqha_ 208 KQIKWYEQSGHVITLDQEKDQLHEDIY--AFLES 239 (242)
T ss_dssp EEEEEETTCCSSGGGSTTHHHHHHHHH--HHHHH
T ss_pred cEEEEECCCCCcCccccCHHHHHHHHH--HHHHh
Confidence 8999999999999987 5889999999 56654
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Probab=99.91 E-value=1.3e-23 Score=200.74 Aligned_cols=256 Identities=13% Similarity=0.105 Sum_probs=159.3
Q ss_pred cCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCC-CCC-------ChHHHHHH
Q 012190 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVY-DRT-------PFEGLVKF 227 (468)
Q Consensus 157 ~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~-G~S-------s~~~~~~d 227 (468)
...||...+...+.+.+...+.+++||++||++++...|..+++.| ++||+|+++|+||| |.| ++.++.+|
T Consensus 10 ~~~dg~~l~~w~~~p~~~~~~~~~~Vvi~HG~~~~~~~~~~~a~~L~~~G~~Vi~~D~rGh~G~S~g~~~~~~~~~~~~d 89 (302)
T d1thta_ 10 RVNNGQELHVWETPPKENVPFKNNTILIASGFARRMDHFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSIDEFTMTTGKNS 89 (302)
T ss_dssp EETTTEEEEEEEECCCTTSCCCSCEEEEECTTCGGGGGGHHHHHHHHTTTCCEEEECCCBCC--------CCCHHHHHHH
T ss_pred EcCCCCEEEEEEecCcCCCCCCCCEEEEeCCCcchHHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCcccCCCHHHHHHH
Confidence 3456655443334443332345789999999999999999999999 66899999999998 777 36788899
Q ss_pred HHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhh
Q 012190 228 VEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLS 307 (468)
Q Consensus 228 l~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (468)
+..+++.+... +.++++|+||||||.+++.+|.. ..++++|+.+|..... ..... .......
T Consensus 90 l~~vi~~l~~~-~~~~i~lvG~SmGG~ial~~A~~--~~v~~li~~~g~~~~~--------~~~~~-------~~~~~~~ 151 (302)
T d1thta_ 90 LCTVYHWLQTK-GTQNIGLIAASLSARVAYEVISD--LELSFLITAVGVVNLR--------DTLEK-------ALGFDYL 151 (302)
T ss_dssp HHHHHHHHHHT-TCCCEEEEEETHHHHHHHHHTTT--SCCSEEEEESCCSCHH--------HHHHH-------HHSSCGG
T ss_pred HHHHHHhhhcc-CCceeEEEEEchHHHHHHHHhcc--cccceeEeecccccHH--------HHHHH-------HHhhccc
Confidence 99998888654 44589999999999999988865 4588999988754321 00000 0000000
Q ss_pred hhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHH---HhHHHhhhcccCCceEEE
Q 012190 308 YVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKS---ASAYANSRLHAVKAEVLV 384 (468)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~l~~i~~PvLl 384 (468)
.. + .......+.. ................. ........+.++++|+|+
T Consensus 152 ~~---~-----------------~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLi 202 (302)
T d1thta_ 152 SL---P-----------------IDELPNDLDF---------EGHKLGSEVFVRDCFEHHWDTLDSTLDKVANTSVPLIA 202 (302)
T ss_dssp GS---C-----------------GGGCCSEEEE---------TTEEEEHHHHHHHHHHTTCSSHHHHHHHHTTCCSCEEE
T ss_pred hh---h-----------------hhhccccccc---------cccchhhHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEE
Confidence 00 0 0000000000 00000000000000000 001123456889999999
Q ss_pred EEeCCCCCCCcHHHHHHHHHhCC--CcEEEEeCCCCccccccCcHHHHHHHHh---cCcccccCCCCCCCCCCCCCHHHH
Q 012190 385 LASGKDNMLPSEDEAKRLNNSLQ--NCIVRNFKDNGHTLLLEEGISLLTIIKG---TCKYRRSRKLDSVADFLPPSRQEF 459 (468)
Q Consensus 385 I~G~~D~~v~~~~~~~~l~~~l~--~~~~~~i~~aGH~~~~e~p~~~~~~I~~---~~F~~r~~~~~~v~~~~~~~~~~~ 459 (468)
++|++|.++|++ .++.+.+.++ ++++++++|+||.+. |+++.....+.. +-.-...-..+...++..|..++.
T Consensus 203 i~G~~D~~V~~~-~~~~l~~~i~s~~~kl~~~~g~~H~l~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 280 (302)
T d1thta_ 203 FTANNDDWVKQE-EVYDMLAHIRTGHCKLYSLLGSSHDLG-ENLVVLRNFYQSVTKAAIAMDGGSLEIDVDFIEPDFEQL 280 (302)
T ss_dssp EEETTCTTSCHH-HHHHHHTTCTTCCEEEEEETTCCSCTT-SSHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCCHHHH
T ss_pred EEeCCCCccCHH-HHHHHHHhCCCCCceEEEecCCCcccc-cChHHHHHHHHHHHHHHhhhcccccccccccCCccHHhh
Confidence 999999999999 7999999885 689999999999975 555543333332 211122223577778899998876
Q ss_pred HH
Q 012190 460 KY 461 (468)
Q Consensus 460 ~~ 461 (468)
..
T Consensus 281 ~~ 282 (302)
T d1thta_ 281 TI 282 (302)
T ss_dssp HH
T ss_pred hh
Confidence 63
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.90 E-value=4.7e-24 Score=208.22 Aligned_cols=124 Identities=13% Similarity=0.056 Sum_probs=91.2
Q ss_pred ccCccCCCCCCceeee--ecCCCC-CCCCCCeEEEeCCCCCchhhHHH------hHhhh-cCCeEEEEecCCCCCCCC--
Q 012190 153 AKEIIKPDGGPPRWFC--PVDCGR-PLKGSPTLLFLPGIDGLGLGLIL------HHKPL-GKAFEVRCLHIPVYDRTP-- 220 (468)
Q Consensus 153 ~~~~~~~dg~~~~~~~--y~~~g~-~~~~~p~lV~lHG~~~s~~~~~~------~~~~L-~~~~~V~~~D~~G~G~Ss-- 220 (468)
...+++.||..+...+ +.+.+. ....+|+|||+||++++...|.. ++..| .+||+|+++|+||||.|+
T Consensus 29 ~h~v~t~DG~~l~~~ri~~~~~~~~~~~~~~~vlllHG~~~~~~~~~~~~~~~sla~~L~~~Gy~V~~~D~rG~G~S~~~ 108 (377)
T d1k8qa_ 29 EYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTWARRN 108 (377)
T ss_dssp EEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTSTTSCEE
T ss_pred EEEEEcCCCCEEEEEEecCCCCCCccCCCCCeEEEECCCccchhHHhhcCccchHHHHHHHCCCEEEEEcCCCCCCCCCC
Confidence 3467788986644332 222222 23457899999999999999854 45666 678999999999999983
Q ss_pred --------------hHHH-HHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCC
Q 012190 221 --------------FEGL-VKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPA 276 (468)
Q Consensus 221 --------------~~~~-~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~ 276 (468)
++++ ..|+.+.++.+....+.++++|+||||||.+++.+|.++|+.+++++++++.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~Dl~~~i~~i~~~~g~~~v~lvGhS~GG~ia~~~a~~~p~~~~~l~~~~~~ 179 (377)
T d1k8qa_ 109 LYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYAL 179 (377)
T ss_dssp SSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEE
T ss_pred CCCCCcchhhccCCHHHHhhhhHHHHHHHHHHHcCCCCEEEEEecchHHHHHHHHHhhhhhhhhceeEeec
Confidence 2333 3455666665555566779999999999999999999999988877775543
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=99.90 E-value=8.1e-24 Score=209.93 Aligned_cols=142 Identities=10% Similarity=0.055 Sum_probs=114.6
Q ss_pred hhHHHHhhcCCCcchHHHHHHhccCcc-CCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcC-C---
Q 012190 131 EELEVLWDDGYGTDSVKDYLDAAKEII-KPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGK-A--- 205 (468)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~y~~~~~~~~-~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~-~--- 205 (468)
+++-..|.++|.....++.+..-..+. +.+|.. +||....+..+++++|||+||++++...|.++++.|++ +
T Consensus 60 ~~l~~~w~~~~dw~~~e~~ln~~~~f~~~i~G~~---iHf~h~~~~~~~~~pLlLlHG~P~s~~~w~~vi~~La~~g~~~ 136 (394)
T d1qo7a_ 60 TTMREKWLSEFDWRPFEARLNSFPQFTTEIEGLT---IHFAALFSEREDAVPIALLHGWPGSFVEFYPILQLFREEYTPE 136 (394)
T ss_dssp HHHHHHHHHTCCHHHHHHHHTTSCEEEEEETTEE---EEEEEECCSCTTCEEEEEECCSSCCGGGGHHHHHHHHHHCCTT
T ss_pred HHHHHHhhhcCCHHHHHHHHHcCCCeEEEECCEE---EEEEEEeccCCCCCEEEEeccccccHHHHHHHHHhhccccCCc
Confidence 346778899998777777776665554 457766 45543333234788999999999999999999999954 3
Q ss_pred ---eEEEEecCCCCCCCC---------hHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEe
Q 012190 206 ---FEVRCLHIPVYDRTP---------FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILS 273 (468)
Q Consensus 206 ---~~V~~~D~~G~G~Ss---------~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli 273 (468)
|+|+++|+||||.|+ ..++++++..+++. ++..+++++|||+||.++..+++.+|+.+.+++++
T Consensus 137 ~~~f~VIaPDLpG~G~S~~P~~~~~y~~~~~a~~~~~l~~~----lg~~~~~~vg~~~Gg~v~~~~a~~~p~~~~~~~l~ 212 (394)
T d1qo7a_ 137 TLPFHLVVPSLPGYTFSSGPPLDKDFGLMDNARVVDQLMKD----LGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLN 212 (394)
T ss_dssp TCCEEEEEECCTTSTTSCCCCSSSCCCHHHHHHHHHHHHHH----TTCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEES
T ss_pred ccceeeecccccccCCCCCCCCCCccCHHHHHHHHHHHHhh----ccCcceEEEEecCchhHHHHHHHHhhccccceeEe
Confidence 999999999999983 78889999999988 44558899999999999999999999999999998
Q ss_pred CCCCCC
Q 012190 274 NPATSF 279 (468)
Q Consensus 274 ~p~~~~ 279 (468)
+.....
T Consensus 213 ~~~~~~ 218 (394)
T d1qo7a_ 213 LCAMRA 218 (394)
T ss_dssp CCCCCS
T ss_pred eecccc
Confidence 765533
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=4.2e-23 Score=190.49 Aligned_cols=94 Identities=13% Similarity=0.095 Sum_probs=83.9
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhhcC---CeEEEEecCCCCCCC------ChHHHHHHHHHHHHHHhhcCCCCcEEEEEe
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPLGK---AFEVRCLHIPVYDRT------PFEGLVKFVEETVRREHASSPEKPIYLVGD 249 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~---~~~V~~~D~~G~G~S------s~~~~~~dl~~~i~~~~~~~~~~~i~LvGh 249 (468)
+|||||+||++++...|..+++.|.+ +|+|+++|+||||.| +++++++++.++++. .+ ++++|+||
T Consensus 2 ~~PvvllHG~~~~~~~~~~~~~~l~~~~~~~~v~~~d~~G~g~S~~~~~~~~~~~~~~l~~~l~~----l~-~~~~lvGh 76 (268)
T d1pjaa_ 2 YKPVIVVHGLFDSSYSFRHLLEYINETHPGTVVTVLDLFDGRESLRPLWEQVQGFREAVVPIMAK----AP-QGVHLICY 76 (268)
T ss_dssp CCCEEEECCTTCCGGGGHHHHHHHHHHSTTCCEEECCSSCSGGGGSCHHHHHHHHHHHHHHHHHH----CT-TCEEEEEE
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCccccCHHHHHHHHHHHHhc----cC-CeEEEEcc
Confidence 45799999999999999999999943 699999999999999 378888888888887 44 69999999
Q ss_pred ChhHHHHHHHHHhCCC-CceEEEEeCCCC
Q 012190 250 SFGGCLALAVAARNPT-IDLILILSNPAT 277 (468)
Q Consensus 250 S~GG~ia~~~a~~~P~-~v~~lVli~p~~ 277 (468)
||||.+|+.+|.++|+ +|+++|+++++.
T Consensus 77 S~GG~ia~~~a~~~p~~~v~~lvl~~~~~ 105 (268)
T d1pjaa_ 77 SQGGLVCRALLSVMDDHNVDSFISLSSPQ 105 (268)
T ss_dssp THHHHHHHHHHHHCTTCCEEEEEEESCCT
T ss_pred ccHHHHHHHHHHHCCccccceEEEECCCC
Confidence 9999999999999998 699999998754
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Probab=99.87 E-value=1.7e-21 Score=171.85 Aligned_cols=175 Identities=15% Similarity=0.170 Sum_probs=126.0
Q ss_pred eEEEeCCCCCchhh--HHHhHhhh-cCCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHH
Q 012190 181 TLLFLPGIDGLGLG--LILHHKPL-GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLAL 257 (468)
Q Consensus 181 ~lV~lHG~~~s~~~--~~~~~~~L-~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~ 257 (468)
.||++||++++... +..+.+.| .++|.|+++|+||+|.+..+++++.+...++. ...+++|+||||||.+++
T Consensus 3 ~V~~vHG~~~~~~~~~~~~l~~~L~~~G~~v~~~d~p~~~~~~~~~~~~~l~~~~~~-----~~~~~~lvGhS~Gg~~a~ 77 (186)
T d1uxoa_ 3 QVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMPNPLQPRLEDWLDTLSLYQHT-----LHENTYLVAHSLGCPAIL 77 (186)
T ss_dssp EEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCSCTTSCCHHHHHHHHHTTGGG-----CCTTEEEEEETTHHHHHH
T ss_pred EEEEECCCCCCcchhHHHHHHHHHHhCCCEEEEeccCCCCcchHHHHHHHHHHHHhc-----cCCCcEEEEechhhHHHH
Confidence 69999999998764 66777888 77899999999999999999998887776653 356899999999999999
Q ss_pred HHHHhCCCCce--EEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhh
Q 012190 258 AVAARNPTIDL--ILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLS 335 (468)
Q Consensus 258 ~~a~~~P~~v~--~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (468)
.+++++|+... ++++..+........ .. ...+.
T Consensus 78 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~--~~-------------------------------------------~~~~~ 112 (186)
T d1uxoa_ 78 RFLEHLQLRAALGGIILVSGFAKSLPTL--QM-------------------------------------------LDEFT 112 (186)
T ss_dssp HHHHTCCCSSCEEEEEEETCCSSCCTTC--GG-------------------------------------------GGGGT
T ss_pred HHHHhCCccceeeEEeecccccccchhh--hh-------------------------------------------hhhhh
Confidence 99999987544 444444322111000 00 00000
Q ss_pred hhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeC
Q 012190 336 NNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFK 415 (468)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~ 415 (468)
. .... . .....+.+|+++|+|++|+++|++ ..+.+++.+ ++++++++
T Consensus 113 ~---------------~~~~-~---------------~~~~~~~~p~lvi~g~~D~~vp~~-~~~~l~~~~-~~~~~~~~ 159 (186)
T d1uxoa_ 113 Q---------------GSFD-H---------------QKIIESAKHRAVIASKDDQIVPFS-FSKDLAQQI-DAALYEVQ 159 (186)
T ss_dssp C---------------SCCC-H---------------HHHHHHEEEEEEEEETTCSSSCHH-HHHHHHHHT-TCEEEEET
T ss_pred c---------------cccc-c---------------cccccCCCCEEEEecCCCCCCCHH-HHHHHHHHc-CCEEEEeC
Confidence 0 0000 0 011235689999999999999999 799999988 78999999
Q ss_pred CCCccccccC---cHHHHHHHHhcCccc
Q 012190 416 DNGHTLLLEE---GISLLTIIKGTCKYR 440 (468)
Q Consensus 416 ~aGH~~~~e~---p~~~~~~I~~~~F~~ 440 (468)
++||+...+. -.++.+.|+ +|+.
T Consensus 160 ~~gH~~~~~~~~~~~~~~~~l~--~~~~ 185 (186)
T d1uxoa_ 160 HGGHFLEDEGFTSLPIVYDVLT--SYFS 185 (186)
T ss_dssp TCTTSCGGGTCSCCHHHHHHHH--HHHH
T ss_pred CCCCcCccccCcccHHHHHHHH--HHHc
Confidence 9999876652 246777777 5543
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Probab=99.85 E-value=3e-20 Score=167.55 Aligned_cols=166 Identities=17% Similarity=0.174 Sum_probs=128.0
Q ss_pred CCeEEEeCCC---CCchh--hHHHhHhhh-cCCeEEEEecCCCCCCCC-----hHHHHHHHHHHHHHHhhcCCCCcEEEE
Q 012190 179 SPTLLFLPGI---DGLGL--GLILHHKPL-GKAFEVRCLHIPVYDRTP-----FEGLVKFVEETVRREHASSPEKPIYLV 247 (468)
Q Consensus 179 ~p~lV~lHG~---~~s~~--~~~~~~~~L-~~~~~V~~~D~~G~G~Ss-----~~~~~~dl~~~i~~~~~~~~~~~i~Lv 247 (468)
.+++|++|+. |++.. .+..+++.| +.+|.|+.+|+||+|.|+ .....+|+..+++.+....+.++++++
T Consensus 35 ~~~~vl~Hph~~~GG~~~~~~~~~la~~l~~~G~~vlrfd~RG~G~S~g~~~~~~~~~~D~~a~~~~~~~~~~~~~v~l~ 114 (218)
T d2fuka1 35 PVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGSFDHGDGEQDDLRAVAEWVRAQRPTDTLWLA 114 (218)
T ss_dssp SEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCSCCCTTTHHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CcEEEEECCCCCCCcCCCChHHHHHHHHHHHcCCeEEEeecCCCccCCCccCcCcchHHHHHHHHHHHhhcccCceEEEE
Confidence 4467888844 34333 356778888 678999999999999983 567788888888888877778899999
Q ss_pred EeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCCh
Q 012190 248 GDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPP 327 (468)
Q Consensus 248 GhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (468)
||||||.+++.+|.+. .++++|+++|+....
T Consensus 115 G~S~Gg~va~~~a~~~--~~~~lil~ap~~~~~----------------------------------------------- 145 (218)
T d2fuka1 115 GFSFGAYVSLRAAAAL--EPQVLISIAPPAGRW----------------------------------------------- 145 (218)
T ss_dssp EETHHHHHHHHHHHHH--CCSEEEEESCCBTTB-----------------------------------------------
T ss_pred EEcccchhhhhhhccc--ccceEEEeCCcccch-----------------------------------------------
Confidence 9999999999988875 478999998743100
Q ss_pred hHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC
Q 012190 328 RIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ 407 (468)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~ 407 (468)
. .....+.+|+|+|+|++|.++|++ ..+++.+.++
T Consensus 146 -------------------------~-------------------~~~~~~~~P~Lvi~G~~D~~vp~~-~~~~l~~~~~ 180 (218)
T d2fuka1 146 -------------------------D-------------------FSDVQPPAQWLVIQGDADEIVDPQ-AVYDWLETLE 180 (218)
T ss_dssp -------------------------C-------------------CTTCCCCSSEEEEEETTCSSSCHH-HHHHHHTTCS
T ss_pred -------------------------h-------------------hhccccccceeeEecCCCcCcCHH-HHHHHHHHcc
Confidence 0 000245689999999999999999 7899888775
Q ss_pred -CcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 408 -NCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 408 -~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
.+++++++|++|+.. .+.+++.+.+. +|++|
T Consensus 181 ~~~~l~~i~ga~H~f~-~~~~~l~~~~~--~~v~~ 212 (218)
T d2fuka1 181 QQPTLVRMPDTSHFFH-RKLIDLRGALQ--HGVRR 212 (218)
T ss_dssp SCCEEEEETTCCTTCT-TCHHHHHHHHH--HHHGG
T ss_pred CCceEEEeCCCCCCCC-CCHHHHHHHHH--HHHHH
Confidence 578999999999754 45567888888 44444
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=99.83 E-value=6e-20 Score=179.38 Aligned_cols=198 Identities=17% Similarity=0.142 Sum_probs=130.7
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCCC--------hHHHHHHHHHHHHHHhhcCCCCcEEEEE
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTP--------FEGLVKFVEETVRREHASSPEKPIYLVG 248 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss--------~~~~~~dl~~~i~~~~~~~~~~~i~LvG 248 (468)
+.|+||++||++++...+..+...| .+||.|+++|+||||.|. ++..++.+.+++..... ....+|.|+|
T Consensus 130 ~~P~Vi~~hG~~~~~e~~~~~~~~l~~~G~~vl~~D~~G~G~s~~~~~~~~~~~~~~~~v~d~l~~~~~-vd~~rI~l~G 208 (360)
T d2jbwa1 130 PHPAVIMLGGLESTKEESFQMENLVLDRGMATATFDGPGQGEMFEYKRIAGDYEKYTSAVVDLLTKLEA-IRNDAIGVLG 208 (360)
T ss_dssp CEEEEEEECCSSCCTTTTHHHHHHHHHTTCEEEEECCTTSGGGTTTCCSCSCHHHHHHHHHHHHHHCTT-EEEEEEEEEE
T ss_pred CceEEEEeCCCCccHHHHHHHHHHHHhcCCEEEEEccccccccCccccccccHHHHHHHHHHHHHhccc-ccccceeehh
Confidence 4689999999999988888888888 779999999999999872 45555555555554221 1235799999
Q ss_pred eChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChh
Q 012190 249 DSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPR 328 (468)
Q Consensus 249 hS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (468)
|||||.+|+.+|+..| +++++|..++......... ........+. ...... .
T Consensus 209 ~S~GG~~Al~~A~~~p-ri~a~V~~~~~~~~~~~~~---------~~~~~~~~~~----~~~~~~------------~-- 260 (360)
T d2jbwa1 209 RSLGGNYALKSAACEP-RLAACISWGGFSDLDYWDL---------ETPLTKESWK----YVSKVD------------T-- 260 (360)
T ss_dssp ETHHHHHHHHHHHHCT-TCCEEEEESCCSCSTTGGG---------SCHHHHHHHH----HHTTCS------------S--
T ss_pred hhcccHHHHHHhhcCC-CcceEEEEcccccHHHHhh---------hhhhhhHHHH----HhccCC------------c--
Confidence 9999999999999887 5899999887654321110 0000000000 000000 0
Q ss_pred HHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC-
Q 012190 329 IKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ- 407 (468)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~- 407 (468)
.+.. . .... ........+.+++||+|+++|++|+ +|++ ..+.+.+.++
T Consensus 261 --~~~~-----------------------~--~~~~--~~~~~~~~~~~i~~P~Lii~G~~D~-vp~~-~~~~l~~~~~~ 309 (360)
T d2jbwa1 261 --LEEA-----------------------R--LHVH--AALETRDVLSQIACPTYILHGVHDE-VPLS-FVDTVLELVPA 309 (360)
T ss_dssp --HHHH-----------------------H--HHHH--HHTCCTTTGGGCCSCEEEEEETTSS-SCTH-HHHHHHHHSCG
T ss_pred --hHHH-----------------------H--HHHH--hhcchhhhHhhCCCCEEEEEeCCCC-cCHH-HHHHHHHhcCC
Confidence 0000 0 0000 0001123567899999999999998 5888 7999999987
Q ss_pred -CcEEEEeCCCCccccccCcHHHHHHHHhc
Q 012190 408 -NCIVRNFKDNGHTLLLEEGISLLTIIKGT 436 (468)
Q Consensus 408 -~~~~~~i~~aGH~~~~e~p~~~~~~I~~~ 436 (468)
+.+++++++++|..+ +.+.+....|.+|
T Consensus 310 ~~~~l~~~~~g~H~~~-~~~~~~~~~i~dW 338 (360)
T d2jbwa1 310 EHLNLVVEKDGDHCCH-NLGIRPRLEMADW 338 (360)
T ss_dssp GGEEEEEETTCCGGGG-GGTTHHHHHHHHH
T ss_pred CCeEEEEECCCCcCCC-cChHHHHHHHHHH
Confidence 557888899999754 5666666666654
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.83 E-value=2.4e-20 Score=173.19 Aligned_cols=113 Identities=16% Similarity=0.273 Sum_probs=84.9
Q ss_pred cCccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC-ChHHHHHHHHHHH
Q 012190 154 KEIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-PFEGLVKFVEETV 232 (468)
Q Consensus 154 ~~~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-s~~~~~~dl~~~i 232 (468)
+.+..++|.. +.+...+. .++++|||+||++++...|..+++.| +++|+++|+||+|.| ++++++++..+.+
T Consensus 5 ~~~~~~~~~~---l~~l~~~~--~~~~Pl~l~Hg~~gs~~~~~~l~~~L--~~~v~~~d~~g~~~~~~~~~~a~~~~~~~ 77 (286)
T d1xkta_ 5 SLLVNPEGPT---LMRLNSVQ--SSERPLFLVHPIEGSTTVFHSLASRL--SIPTYGLQCTRAAPLDSIHSLAAYYIDCI 77 (286)
T ss_dssp GSCCCTTSCS---EEECCCCC--CCSCCEEEECCTTCCCGGGHHHHHTC--SSCEEEECCCTTSCCSCHHHHHHHHHHHH
T ss_pred HHhcCCCCCE---EEEecCCC--CCCCeEEEECCCCccHHHHHHHHHHc--CCeEEEEeCCCCCCCCCHHHHHHHHHHHH
Confidence 3456677754 34444443 24567999999999999999999999 488999999999988 5788887776655
Q ss_pred HHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCC
Q 012190 233 RREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPA 276 (468)
Q Consensus 233 ~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~ 276 (468)
... .+.++++|+||||||.+|+.+|.++|+++.++++++..
T Consensus 78 ~~~---~~~~~~~lvGhS~Gg~vA~~~A~~~p~~~~~v~~l~~~ 118 (286)
T d1xkta_ 78 RQV---QPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSL 118 (286)
T ss_dssp HHH---CCSSCCEEEEETHHHHHHHHHHHHHHHC------CCEE
T ss_pred HHh---cCCCceEEeecCCccHHHHHHHHHHHHcCCCceeEEEe
Confidence 553 45679999999999999999999999998888776643
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Probab=99.82 E-value=1.8e-20 Score=170.31 Aligned_cols=207 Identities=18% Similarity=0.149 Sum_probs=127.5
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHH
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALA 258 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~ 258 (468)
+++|||+||++++...|..+++.|. +|.|+++|++|+|. .++++.+.++++ .+.++++|+||||||.+|+.
T Consensus 17 ~~~l~~lhg~~g~~~~~~~la~~L~-~~~v~~~~~~g~~~-----~a~~~~~~i~~~---~~~~~~~lvGhS~GG~vA~~ 87 (230)
T d1jmkc_ 17 EQIIFAFPPVLGYGLMYQNLSSRLP-SYKLCAFDFIEEED-----RLDRYADLIQKL---QPEGPLTLFGYSAGCSLAFE 87 (230)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHCT-TEEEEEECCCCSTT-----HHHHHHHHHHHH---CCSSCEEEEEETHHHHHHHH
T ss_pred CCeEEEEcCCCCCHHHHHHHHHHCC-CCEEeccCcCCHHH-----HHHHHHHHHHHh---CCCCcEEEEeeccChHHHHH
Confidence 7799999999999999999999995 69999999999973 455555555553 35678999999999999999
Q ss_pred HHHhCCCC---ceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhh
Q 012190 259 VAARNPTI---DLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLS 335 (468)
Q Consensus 259 ~a~~~P~~---v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (468)
+|.++|++ +..++.+++............ . .... ........ ... .... .+...
T Consensus 88 ~A~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~---~---~~~~---~~~~~~~~-~~~---------~~~~----~~~~~ 144 (230)
T d1jmkc_ 88 AAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGR---T---VESD---VEALMNVN-RDN---------EALN----SEAVK 144 (230)
T ss_dssp HHHHHHHTTCCEEEEEEESCCEECCCC--------------CC---HHHHHHHT-TTC---------SGGG----SHHHH
T ss_pred HHHhhhhhCccceeeecccccCccchhhhhhh---h---hhhh---hhhhhhcc-ccc---------cccc----cHHHH
Confidence 99887654 555555554332211111000 0 0000 00000000 000 0000 00000
Q ss_pred hhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhC-CCcEEEEe
Q 012190 336 NNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSL-QNCIVRNF 414 (468)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l-~~~~~~~i 414 (468)
..+......... ..........+++|+++|+|++|..++.. ...+.+.. ++.+++.+
T Consensus 145 -------------------~~~~~~~~~~~~-~~~~~~~~~~i~~p~l~i~g~~D~~~~~~--~~~w~~~~~~~~~~~~i 202 (230)
T d1jmkc_ 145 -------------------HGLKQKTHAFYS-YYVNLISTGQVKADIDLLTSGADFDIPEW--LASWEEATTGAYRMKRG 202 (230)
T ss_dssp -------------------HHHHHHHHHHHH-HHHHCCCCSCBSSEEEEEECSSCCCCCTT--EECSGGGBSSCEEEEEC
T ss_pred -------------------HHHHHHHHHHHH-hhhcccccccccCcceeeeecCCcccchh--HHHHHHhccCCcEEEEE
Confidence 000000011111 11112455789999999999999999876 33334444 46788888
Q ss_pred CCCCccccccCc--HHHHHHHHhcCccccc
Q 012190 415 KDNGHTLLLEEG--ISLLTIIKGTCKYRRS 442 (468)
Q Consensus 415 ~~aGH~~~~e~p--~~~~~~I~~~~F~~r~ 442 (468)
+ +||+.++++| ++++++|. +|++|.
T Consensus 203 ~-g~H~~ml~~~~~~~va~~I~--~~L~~~ 229 (230)
T d1jmkc_ 203 F-GTHAEMLQGETLDRNAGILL--EFLNTQ 229 (230)
T ss_dssp S-SCGGGTTSHHHHHHHHHHHH--HHHTCB
T ss_pred c-CCChhhcCCccHHHHHHHHH--HHHhhc
Confidence 8 5999998876 88999999 677763
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.80 E-value=3.3e-19 Score=168.16 Aligned_cols=203 Identities=15% Similarity=0.149 Sum_probs=134.9
Q ss_pred CCCCeEEEeCCC--CCchhhHHHhHhhhcCCeEEEEecCCCCCCC----------ChHHHHHHHHHHHHHHhhcCCCCcE
Q 012190 177 KGSPTLLFLPGI--DGLGLGLILHHKPLGKAFEVRCLHIPVYDRT----------PFEGLVKFVEETVRREHASSPEKPI 244 (468)
Q Consensus 177 ~~~p~lV~lHG~--~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S----------s~~~~~~dl~~~i~~~~~~~~~~~i 244 (468)
.+.|+|||+||+ +++...|.++++.|...++|+++|+||||.+ +++++++++.+.+... .+..|+
T Consensus 58 ~~~~~l~c~~~~~~~g~~~~y~~la~~L~~~~~V~al~~pG~~~~~~~~~~~~~~s~~~~a~~~~~~i~~~---~~~~P~ 134 (283)
T d2h7xa1 58 EGRAVLVGCTGTAANGGPHEFLRLSTSFQEERDFLAVPLPGYGTGTGTGTALLPADLDTALDAQARAILRA---AGDAPV 134 (283)
T ss_dssp CCCCEEEEECCCCTTCSTTTTHHHHHTTTTTCCEEEECCTTCCBC---CBCCEESSHHHHHHHHHHHHHHH---HTTSCE
T ss_pred CCCceEEEeCCCCCCCCHHHHHHHHHhcCCCceEEEEeCCCCCCCCCCccccccCCHHHHHHHHHHHHHHh---cCCCce
Confidence 357899999995 5677899999999999999999999999875 4678887766655432 456699
Q ss_pred EEEEeChhHHHHHHHHHhC----CCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHh
Q 012190 245 YLVGDSFGGCLALAVAARN----PTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVN 320 (468)
Q Consensus 245 ~LvGhS~GG~ia~~~a~~~----P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (468)
+|+||||||.+|+.+|.+. ++.+.++|++++........ ......... ...... .
T Consensus 135 vL~GhS~GG~vA~e~A~~l~~~~g~~v~~LvL~d~~~~~~~~~-------~~~~~~~~~---~~~~~~---~-------- 193 (283)
T d2h7xa1 135 VLLGHSGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEP-------IEVWSRQLG---EGLFAG---E-------- 193 (283)
T ss_dssp EEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTCCHH-------HHHTHHHHH---HHHHHT---C--------
T ss_pred EEEEeccchHHHHHHHHhhHHHcCCCceEEEEecCCccccccc-------hhhhhhhhH---HHhhcc---c--------
Confidence 9999999999999999864 56899999999754321110 000000000 000000 0
Q ss_pred hccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHH
Q 012190 321 IENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAK 400 (468)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~ 400 (468)
... .....+....... ..........+++|+++|+|++|..++.. ...
T Consensus 194 -~~~---------------------------~~~~~l~a~~~~~---~~~~~~~~~~~~~Pvl~i~g~~d~~~~~~-~~~ 241 (283)
T d2h7xa1 194 -LEP---------------------------MSDARLLAMGRYA---RFLAGPRPGRSSAPVLLVRASEPLGDWQE-ERG 241 (283)
T ss_dssp -SSC---------------------------CCHHHHHHHHHHH---HHHHSCCCCCCCSCEEEEEESSCSSCCCG-GGC
T ss_pred -ccc---------------------------cccHHHHHHHHHH---HHHhhccccccCCCeEEEEeCCCCCCCHH-HHH
Confidence 000 0000111000111 11112344778999999999999999988 566
Q ss_pred HHHHhCC-CcEEEEeCCCCcccc-ccCcHHHHHHHHhc
Q 012190 401 RLNNSLQ-NCIVRNFKDNGHTLL-LEEGISLLTIIKGT 436 (468)
Q Consensus 401 ~l~~~l~-~~~~~~i~~aGH~~~-~e~p~~~~~~I~~~ 436 (468)
.+.+..+ ..+++.+++ +|+.+ .|+++.+++.|.+|
T Consensus 242 ~w~~~~~~~~~~~~v~G-~H~~ml~e~~~~vA~~i~~~ 278 (283)
T d2h7xa1 242 DWRAHWDLPHTVADVPG-DHFTMMRDHAPAVAEAVLSW 278 (283)
T ss_dssp CCSCCCSSCSEEEEESS-CTTHHHHTTHHHHHHHHHHH
T ss_pred HHHHhCCCCcEEEEEcC-CCcccccCCHHHHHHHHHHH
Confidence 6666665 468999996 89855 46799999999943
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=99.79 E-value=4.3e-19 Score=155.63 Aligned_cols=169 Identities=14% Similarity=0.097 Sum_probs=127.5
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCCC--hHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHH
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTP--FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCL 255 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss--~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~i 255 (468)
.|||||+||++++...|..+.+.| .++|.++.+|.+|++.+. ....++++.+.++.+....+.++++|+||||||.+
T Consensus 2 ~~PVv~vHG~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvGHSmGG~v 81 (179)
T d1ispa_ 2 HNPVVMVHGIGGASFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNYNNGPVLSRFVQKVLDETGAKKVDIVAHSMGGAN 81 (179)
T ss_dssp CCCEEEECCTTCCGGGGHHHHHHHHHTTCCGGGEEECCCSCTTCCHHHHHHHHHHHHHHHHHHHCCSCEEEEEETHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHHHcCCeEEEEecCCccccccccchhhhhHHHHHHHHHHhcCCceEEEEeecCcCHH
Confidence 456899999999999999999999 677999999999998883 44445555555555444456679999999999999
Q ss_pred HHHHHHhC--CCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhh
Q 012190 256 ALAVAARN--PTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQ 333 (468)
Q Consensus 256 a~~~a~~~--P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (468)
+..++.++ |++|+++|+++++....... .
T Consensus 82 a~~~~~~~~~~~~V~~~V~l~~p~~g~~~~----------------------------------------~--------- 112 (179)
T d1ispa_ 82 TLYYIKNLDGGNKVANVVTLGGANRLTTGK----------------------------------------A--------- 112 (179)
T ss_dssp HHHHHHHSSGGGTEEEEEEESCCGGGTCSB----------------------------------------C---------
T ss_pred HHHHHHHcCCchhhCEEEEECCCCCCchhh----------------------------------------h---------
Confidence 99999887 67899999998743110000 0
Q ss_pred hhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEE
Q 012190 334 LSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRN 413 (468)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~ 413 (468)
++ ......++|++.|+|+.|.++++. .+ .+++++.+.
T Consensus 113 ------------------l~-------------------~~~~~~~~~~~~i~~~~D~~v~~~-~~-----~l~~~~~~~ 149 (179)
T d1ispa_ 113 ------------------LP-------------------GTDPNQKILYTSIYSSADMIVMNY-LS-----RLDGARNVQ 149 (179)
T ss_dssp ------------------CC-------------------CSCTTCCCEEEEEEETTCSSSCHH-HH-----CCBTSEEEE
T ss_pred ------------------cC-------------------CcccccCceEEEEEecCCcccCch-hh-----cCCCceEEE
Confidence 00 001234679999999999999987 22 578899999
Q ss_pred eCCCCccccccCcHHHHHHHHhcCccccc
Q 012190 414 FKDNGHTLLLEEGISLLTIIKGTCKYRRS 442 (468)
Q Consensus 414 i~~aGH~~~~e~p~~~~~~I~~~~F~~r~ 442 (468)
+++.+|.....+| ++.+.|. +|++..
T Consensus 150 ~~~~~H~~l~~~~-~v~~~i~--~~L~~~ 175 (179)
T d1ispa_ 150 IHGVGHIGLLYSS-QVNSLIK--EGLNGG 175 (179)
T ss_dssp ESSCCTGGGGGCH-HHHHHHH--HHHTTT
T ss_pred ECCCCchhhccCH-HHHHHHH--HHHhcc
Confidence 9999999988887 5677777 456543
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Probab=99.77 E-value=5.2e-18 Score=161.30 Aligned_cols=223 Identities=15% Similarity=0.092 Sum_probs=135.9
Q ss_pred cCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCCC---------------
Q 012190 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTP--------------- 220 (468)
Q Consensus 157 ~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss--------------- 220 (468)
...||......-+.+.+. ...|+||++||++++...|...+..| .++|.|+++|+||||.|+
T Consensus 62 ~~~dg~~i~~~l~~P~~~--~~~P~vv~~HG~~~~~~~~~~~~~~la~~Gy~vi~~D~rG~G~s~~~~~~~~~~~~~~~~ 139 (318)
T d1l7aa_ 62 KSFGNARITGWYAVPDKE--GPHPAIVKYHGYNASYDGEIHEMVNWALHGYATFGMLVRGQQRSEDTSISPHGHALGWMT 139 (318)
T ss_dssp EEGGGEEEEEEEEEESSC--SCEEEEEEECCTTCCSGGGHHHHHHHHHTTCEEEEECCTTTSSSCCCCCCSSCCSSSSTT
T ss_pred ECCCCcEEEEEEEecCCC--CCceEEEEecCCCCCccchHHHHHHHHHCCCEEEEEeeCCCCCCCCCcccchhhhhcchh
Confidence 344565433222333333 24789999999999999999999888 678999999999999882
Q ss_pred ----------hHHHHHHHHHHHHHHhhcC--CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcch
Q 012190 221 ----------FEGLVKFVEETVRREHASS--PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLF 288 (468)
Q Consensus 221 ----------~~~~~~dl~~~i~~~~~~~--~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~ 288 (468)
......+....++.+.... ...++.++|+|+||..++..+...+. +.++++..|.... ..
T Consensus 140 ~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~v~~~~i~~~G~s~Gg~~~~~~~~~~~~-~~~~~~~~~~~~~-------~~ 211 (318)
T d1l7aa_ 140 KGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVADYPYLSN-------FE 211 (318)
T ss_dssp TTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEESCCSCC-------HH
T ss_pred hchhhhhhhhhHHHHHHHHHHHHHHHhcccccCcceEEEeeccccHHHHHHhhcCcc-cceEEEecccccc-------HH
Confidence 1223344444444443322 13468999999999999999999865 5666666553311 11
Q ss_pred HHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHh
Q 012190 289 PILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSAS 368 (468)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 368 (468)
............. ...+..... ............. .
T Consensus 212 ~~~~~~~~~~~~~-----------------------------~~~~~~~~~-------------~~~~~~~~~~~~~--~ 247 (318)
T d1l7aa_ 212 RAIDVALEQPYLE-----------------------------INSFFRRNG-------------SPETEVQAMKTLS--Y 247 (318)
T ss_dssp HHHHHCCSTTTTH-----------------------------HHHHHHHSC-------------CHHHHHHHHHHHH--T
T ss_pred HHhhcccccccch-----------------------------hhhhhhccc-------------ccccccccccccc--c
Confidence 1111100000000 000000000 0000000000000 0
Q ss_pred HHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC-CcEEEEeCCCCccccccCcHHHHHHHH
Q 012190 369 AYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ-NCIVRNFKDNGHTLLLEEGISLLTIIK 434 (468)
Q Consensus 369 ~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~-~~~~~~i~~aGH~~~~e~p~~~~~~I~ 434 (468)
......+.++++|+|+++|++|.++|++ .+..+++.++ ++++++++++||....+..+++.+.+.
T Consensus 248 ~~~~~~~~~i~~P~Lii~G~~D~~vp~~-~~~~~~~~l~~~~~l~~~~~~gH~~~~~~~~~~~~fl~ 313 (318)
T d1l7aa_ 248 FDIMNLADRVKVPVLMSIGLIDKVTPPS-TVFAAYNHLETKKELKVYRYFGHEYIPAFQTEKLAFFK 313 (318)
T ss_dssp TCHHHHGGGCCSCEEEEEETTCSSSCHH-HHHHHHHHCCSSEEEEEETTCCSSCCHHHHHHHHHHHH
T ss_pred cccccccccCCCCEEEEEECCCCCcCHH-HHHHHHHHcCCCcEEEEECCCCCCCcHHHHHHHHHHHH
Confidence 0012345788999999999999999999 7999999887 689999999999876665555555554
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=99.76 E-value=1.1e-17 Score=162.02 Aligned_cols=264 Identities=12% Similarity=0.108 Sum_probs=162.3
Q ss_pred eeeeecCCCCCC-CCCCeEEEeCCCCCchh--hH-HHhH---hhh-cCCeEEEEecCCCCCCC-----------------
Q 012190 165 RWFCPVDCGRPL-KGSPTLLFLPGIDGLGL--GL-ILHH---KPL-GKAFEVRCLHIPVYDRT----------------- 219 (468)
Q Consensus 165 ~~~~y~~~g~~~-~~~p~lV~lHG~~~s~~--~~-~~~~---~~L-~~~~~V~~~D~~G~G~S----------------- 219 (468)
.-+.|...|... ...++||++|++.++.. .| ..++ +.| ...|.|+|+|..|.|.+
T Consensus 29 ~~laY~t~G~ln~~~~NaVlv~h~ltg~~~~~~WW~~liG~g~alDt~kyfVI~~n~lG~~~gst~p~s~~p~~~~~~~y 108 (376)
T d2vata1 29 VPVAYKSWGRMNVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAEGQRPY 108 (376)
T ss_dssp EEEEEEEESCCCTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC--CBC
T ss_pred ceEEEEeecccCCCCCCEEEEcCCCcCCccccccHHHhCCCCCccCccceEEEEeccCCCCcCCCCCCCCCcccccCCcc
Confidence 346788888753 34678999999988875 22 3333 455 56799999999987642
Q ss_pred -------ChHHHHHHHHHHHHHHhhcCCCCcE-EEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcch---
Q 012190 220 -------PFEGLVKFVEETVRREHASSPEKPI-YLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLF--- 288 (468)
Q Consensus 220 -------s~~~~~~dl~~~i~~~~~~~~~~~i-~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~--- 288 (468)
++.|+++....++++++. +++ .++|.||||+.|+++|..+|++|+++|.+++......-.. .+.
T Consensus 109 g~~FP~~ti~D~v~aq~~ll~~LGI----~~l~aViG~SmGGmqal~wa~~~Pd~v~~li~Ia~~~~~s~~~~-a~~~~~ 183 (376)
T d2vata1 109 GAKFPRTTIRDDVRIHRQVLDRLGV----RQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSGWCA-AWFETQ 183 (376)
T ss_dssp GGGCCCCCHHHHHHHHHHHHHHHTC----CCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCHHHH-HHHHHH
T ss_pred cccCCcchhHHHHHHHHHHHHHhCc----ceEEEeecccHHHHHHHHHHHhchHHHhhhcccccccccchHHH-HHHHHH
Confidence 357888888888888554 365 5889999999999999999999999999988663321000 000
Q ss_pred -HHHhhCchhHHhhHHHHhhhhcCCh---hhHH-HHhhccCCChhHHhhhhhh---------------------------
Q 012190 289 -PILKAMPDELHCAVPYLLSYVMGDP---IKMA-MVNIENRLPPRIKLEQLSN--------------------------- 336 (468)
Q Consensus 289 -~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~--------------------------- 336 (468)
..+..-+.+..... .....| +..+ ........+++.+.+.+.+
T Consensus 184 ~~ai~~Dp~w~~G~Y-----~~~~~p~~GL~~Ar~~~~~ty~S~~~~~~rf~~~~~~~~gr~~~~~~~~~~~~~~~~~~~ 258 (376)
T d2vata1 184 RQCIYDDPKYLDGEY-----DVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTDSGNS 258 (376)
T ss_dssp HHHHHHSTTSGGGTC-----CTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC----------------------
T ss_pred HHHhhccccccCCCc-----cccchhHHHHHHHHHHHHHHhcCHHHHHHHHhhccccccccccccchhhhcccccccccc
Confidence 00111010000000 000000 0000 0000000111111111100
Q ss_pred --------hcchhc-chhhhhhccCCcchhHHHHHHHHHHhH------HHhhhcccCCceEEEEEeCCCCCCCcHHHHHH
Q 012190 337 --------NLPALL-PRLSVMSDIIPKDTLLWKLKLLKSASA------YANSRLHAVKAEVLVLASGKDNMLPSEDEAKR 401 (468)
Q Consensus 337 --------~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~ 401 (468)
....++ .........+....+....+.+...+. .+.+.|..|++|+|+|.++.|.++|++ +.+.
T Consensus 259 ~~~~~~~~~vesyL~~~g~k~~~rfDansyl~l~~a~d~~Di~~~~~g~l~~aL~~I~a~~LvI~~~sD~lFPp~-~~~e 337 (376)
T d2vata1 259 HRAGQPIEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFD-EHVE 337 (376)
T ss_dssp -----CGGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHH-HHHH
T ss_pred cccccchhHHHHHHHHHHhhhhcccccccHHHHHHHHHhcccccccCCCHHHHHhhCCCCEEEEEeCcccCcCHH-HHHH
Confidence 000000 111222333455555555555554321 234568999999999999999999999 7999
Q ss_pred HHHhCCCcEEEEeC-CCCccccccCcHHHHHHHHhcCcccc
Q 012190 402 LNNSLQNCIVRNFK-DNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 402 l~~~l~~~~~~~i~-~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
+++.++++++++++ ..||..++-+++++...|+ .|+++
T Consensus 338 ~a~~l~~a~~~~I~S~~GHDaFL~e~~~~~~~I~--~FL~q 376 (376)
T d2vata1 338 MGRSIPNSRLCVVDTNEGHDFFVMEADKVNDAVR--GFLDQ 376 (376)
T ss_dssp HHHHSTTEEEEECCCSCGGGHHHHTHHHHHHHHH--HHHTC
T ss_pred HHHhcCCCeEEEECCCCCccccccCHHHHHHHHH--HHHcC
Confidence 99999999999998 6899988889999999999 67653
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=99.75 E-value=5.9e-18 Score=157.25 Aligned_cols=221 Identities=15% Similarity=0.191 Sum_probs=140.0
Q ss_pred ccCCCCCCceeeeecCCCCCCCCCCeEEEeCCC--CCchhhHHHhHhhh-cCCeEEEEecCCCCCCCC-----------h
Q 012190 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGI--DGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTP-----------F 221 (468)
Q Consensus 156 ~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~--~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss-----------~ 221 (468)
+...||....-+-|.+.+. ..+.|+||++||. +.....|......| .++|.|+++|+||++.+. .
T Consensus 17 ~~s~dG~~i~~~l~~p~~~-~~~~Pviv~~HGG~~~~~~~~~~~~~~~la~~G~~v~~~d~r~~~~~g~~~~~~~~~~~~ 95 (260)
T d2hu7a2 17 VESFDGSRVPTYVLESGRA-PTPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLKIIGDPC 95 (260)
T ss_dssp EECTTSCEEEEEEEEETTS-CSSEEEEEEECSSSSCCCCSSCCHHHHHHHHHTCEEEEECCTTCSSSCHHHHHTTTTCTT
T ss_pred EECCCCCEEEEEEEeCCCC-CCCceEEEEECCCCccCCCccccHHHHHHHhhccccccceeeeccccccccccccccccc
Confidence 4567776643333333332 1346799999983 33344566667777 678999999999998763 1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhh
Q 012190 222 EGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCA 301 (468)
Q Consensus 222 ~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (468)
....+|+.+.++.+.......++.++|+|+||..++.++..+|+.+++++..+|.... ............
T Consensus 96 ~~~~~D~~~~~~~l~~~~~~~~~~i~g~s~gg~~~~~~~~~~~~~~~a~i~~~~~~~~--------~~~~~~~~~~~~-- 165 (260)
T d2hu7a2 96 GGELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDW--------EEMYELSDAAFR-- 165 (260)
T ss_dssp THHHHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTSSSEEEEESCCCCH--------HHHHHTCCHHHH--
T ss_pred hhhhhhhcccccccccccccceeeccccccccccccchhccCCcccccccccccchhh--------hhhhcccccccc--
Confidence 2345677777777665555578999999999999999999999999999998875422 111111111000
Q ss_pred HHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCce
Q 012190 302 VPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAE 381 (468)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~P 381 (468)
.......... .+ .+.... ....+.++++|
T Consensus 166 --~~~~~~~~~~-----------------~~------------------------------~~~~~~--~~~~~~~~~~P 194 (260)
T d2hu7a2 166 --NFIEQLTGGS-----------------RE------------------------------IMRSRS--PINHVDRIKEP 194 (260)
T ss_dssp --HHHHHHHCSC-----------------HH------------------------------HHHHTC--GGGCGGGCCSC
T ss_pred --cccccccccc-----------------cc------------------------------cccccc--hhhcccccCCC
Confidence 0000000000 00 000000 01344778899
Q ss_pred EEEEEeCCCCCCCcHHHHHHHHHhC----CCcEEEEeCCCCccccc-cCcHHHHHHHHhcCcccc
Q 012190 382 VLVLASGKDNMLPSEDEAKRLNNSL----QNCIVRNFKDNGHTLLL-EEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 382 vLlI~G~~D~~v~~~~~~~~l~~~l----~~~~~~~i~~aGH~~~~-e~p~~~~~~I~~~~F~~r 441 (468)
+|+++|++|..+|.. .+..+.+.+ .+++++++||+||.+.. |+..++...+. +|+.+
T Consensus 195 ~liihG~~D~~vp~~-~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~e~~~~~~~~~~--~fl~~ 256 (260)
T d2hu7a2 195 LALIHPQNDSRTPLK-PLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAV--FFLAT 256 (260)
T ss_dssp EEEEEETTCSSSCSH-HHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHHHH--HHHHH
T ss_pred ceeeecccCceecHH-HHHHHHHHHHHCCCCeEEEEECcCCCCCCChHhHHHHHHHHH--HHHHH
Confidence 999999999999999 788887765 35799999999997643 44444444444 45544
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Probab=99.75 E-value=1.8e-17 Score=151.12 Aligned_cols=185 Identities=18% Similarity=0.167 Sum_probs=117.2
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCCC-----------hHHH-------HHHHHHHHHHHhhc
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTP-----------FEGL-------VKFVEETVRREHAS 238 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss-----------~~~~-------~~dl~~~i~~~~~~ 238 (468)
++|+||++||++++...|..+++.| ..||.|+++|+||||.|. .++. .+++..++.....
T Consensus 23 ~~~~vl~lHG~~~~~~~~~~~~~~la~~G~~V~~~D~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 101 (238)
T d1ufoa_ 23 PKALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAER- 101 (238)
T ss_dssp CCEEEEEECCTTCCHHHHHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred CCeEEEEeCCCCCCHHHHHHHHHHHHHCCCEEEEecCCCCCCCcccccccccchhhhhhhhhHHhHHHHHHHHhhhccc-
Confidence 3789999999999999999999999 568999999999999873 1222 2222222222111
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHH
Q 012190 239 SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAM 318 (468)
Q Consensus 239 ~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (468)
....++.++|||+||.+++.+++.+|+....+.++.+............ . .+.
T Consensus 102 ~~~~~v~~~G~S~Gg~~a~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~---------~----~~~-------------- 154 (238)
T d1ufoa_ 102 RFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKLPQGQVV---------E----DPG-------------- 154 (238)
T ss_dssp HHCCCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCCCCTTCCC---------C----CHH--------------
T ss_pred cCCceEEEEEecccHHHHHHHHhcCcchhheeeeeeecccccccccccc---------c----ccc--------------
Confidence 2346899999999999999999999876555555443221111000000 0 000
Q ss_pred HhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHH
Q 012190 319 VNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDE 398 (468)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~ 398 (468)
....... . .........++|+|+++|++|.++|.+ .
T Consensus 155 ------------~~~~~~~---------------~----------------~~~~~~~~~~~P~li~~G~~D~~v~~~-~ 190 (238)
T d1ufoa_ 155 ------------VLALYQA---------------P----------------PATRGEAYGGVPLLHLHGSRDHIVPLA-R 190 (238)
T ss_dssp ------------HHHHHHS---------------C----------------GGGCGGGGTTCCEEEEEETTCTTTTHH-H
T ss_pred ------------ccchhhh---------------h----------------hhhhhhhhcCCCeEEEEcCCCCccCHH-H
Confidence 0000000 0 000111345689999999999999999 7
Q ss_pred HHHHHHhCC------CcEEEEeCCCCccccccCcHHHHHHHH
Q 012190 399 AKRLNNSLQ------NCIVRNFKDNGHTLLLEEGISLLTIIK 434 (468)
Q Consensus 399 ~~~l~~~l~------~~~~~~i~~aGH~~~~e~p~~~~~~I~ 434 (468)
.+++.+.+. +.++..++|+||.+.-+.-....+.+.
T Consensus 191 ~~~~~~~l~~~~~~~~~~~~~~~g~gH~~~~~~~~~~~~f~~ 232 (238)
T d1ufoa_ 191 MEKTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLE 232 (238)
T ss_dssp HHHHHHHHGGGCTTCCEEEEEETTCCSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCceEEEEEECCCCCccCHHHHHHHHHHHH
Confidence 888887652 467888999999875443333333333
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=99.74 E-value=3.6e-17 Score=157.62 Aligned_cols=271 Identities=17% Similarity=0.191 Sum_probs=163.5
Q ss_pred ccCCCCCC--ceeeeecCCCCCC-CCCCeEEEeCCCCCchh-------------hHHHhH---hhh-cCCeEEEEecCCC
Q 012190 156 IIKPDGGP--PRWFCPVDCGRPL-KGSPTLLFLPGIDGLGL-------------GLILHH---KPL-GKAFEVRCLHIPV 215 (468)
Q Consensus 156 ~~~~dg~~--~~~~~y~~~g~~~-~~~p~lV~lHG~~~s~~-------------~~~~~~---~~L-~~~~~V~~~D~~G 215 (468)
+....|.. ..-+.|...|.+. ...++||++|++.++.. -|..++ +.| .+.|.|+|+|..|
T Consensus 16 f~le~G~~l~~~~l~Y~t~G~ln~~~~NaVlv~h~~tG~~~~~g~~~~~~~~~gww~~liG~g~~lDt~~yfVI~~n~lG 95 (362)
T d2pl5a1 16 LILNNGSVLSPVVIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIG 95 (362)
T ss_dssp EECTTSCEESSEEEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTT
T ss_pred eecCCCCCcCCceEEEEeeeccCCCCCCEEEECCCCCcchhccccCCccCCCcchHHHhcCCCCccCccccEEEeecccc
Confidence 44444443 2457788777653 23579999999988742 233333 455 5679999999999
Q ss_pred CCCC----------------------ChHHHHHHHHHHHHHHhhcCCCCcEE-EEEeChhHHHHHHHHHhCCCCceEEEE
Q 012190 216 YDRT----------------------PFEGLVKFVEETVRREHASSPEKPIY-LVGDSFGGCLALAVAARNPTIDLILIL 272 (468)
Q Consensus 216 ~G~S----------------------s~~~~~~dl~~~i~~~~~~~~~~~i~-LvGhS~GG~ia~~~a~~~P~~v~~lVl 272 (468)
.|.+ ++.|+++....+++++ +.+++. ++|.||||+.|+.+|..||+.|+++|.
T Consensus 96 ~~~~ss~~~s~~p~~~~~yg~~fP~~t~~D~v~~~~~ll~~L----GI~~l~~viG~SmGGmqAl~wA~~yPd~v~~~v~ 171 (362)
T d2pl5a1 96 GCKGSSGPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESL----GIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIV 171 (362)
T ss_dssp CSSSSSSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHT----TCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEE
T ss_pred CcccccCccccccccccccCcCCccchhHHHHHHHHHHHHHh----CcCeeEEEeehhHHHHHHHHHHHhCchHhhhhcc
Confidence 8754 2567777777777774 444665 789999999999999999999999999
Q ss_pred eCCCCCCCCCCcCcch----HHHhhCchhHHhhHHHHhhhhcCCh---hhH-HHHhhccCCChhHHhhhhhhhcc-----
Q 012190 273 SNPATSFGRSQLQPLF----PILKAMPDELHCAVPYLLSYVMGDP---IKM-AMVNIENRLPPRIKLEQLSNNLP----- 339 (468)
Q Consensus 273 i~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~----- 339 (468)
+++......... .+. ..+..-+.+.... + ....| +.. .........+++.+.+.+.+...
T Consensus 172 ia~sa~~s~~~~-~~~~~~~~aI~~Dp~~~~G~----Y--~~~~P~~GL~~AR~~~~~~y~s~~~~~~~f~~~~~~~~~~ 244 (362)
T d2pl5a1 172 MASTAEHSAMQI-AFNEVGRQAILSDPNWKNGL----Y--DENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNIL 244 (362)
T ss_dssp ESCCSBCCHHHH-HHHHHHHHHHHTSTTCGGGT----C--SSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTT
T ss_pred cccccccCHHHH-HHHHHHHHHHhcCCccccCC----c--ccCChhHHHHHHHHHHHHHHcCchhhhhhhcccccccccc
Confidence 998663321100 000 0111101000000 0 00000 000 00011111112211222221110
Q ss_pred -------hhc-chhhhhhccCCcchhHHHHHHHHHHh----HHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC
Q 012190 340 -------ALL-PRLSVMSDIIPKDTLLWKLKLLKSAS----AYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ 407 (468)
Q Consensus 340 -------~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~----~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~ 407 (468)
..+ ..-......+....+.+..+.+...+ ..+.+.|.+|++|+|+|..+.|.++|++ +.+.+++.++
T Consensus 245 ~~~~~ve~yl~~~g~k~~~rfDan~yl~l~~a~~~~Di~~~~~l~~aL~~I~AkvLvi~~~sD~lFpp~-~~~~~a~~l~ 323 (362)
T d2pl5a1 245 STDFAVGSYLIYQGESFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPA-QSREIVKSLE 323 (362)
T ss_dssp TTTTTSCGGGGSTTCCSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHH-HHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHhcCCHHHHHHHHhhhhcccccccccHHHHHhhCCCCEEEEEeCcccCcCHH-HHHHHHHHHH
Confidence 000 11112223344555555555555432 2345678999999999999999999999 7999999886
Q ss_pred C----cEEEEeC-CCCccccccCcHHHHHHHHhcCccc
Q 012190 408 N----CIVRNFK-DNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 408 ~----~~~~~i~-~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
+ +++++++ ..||..++.+++++.+.|+ .|+.
T Consensus 324 ~a~~~v~~~eI~S~~GHdaFL~e~~~~~~~I~--~FL~ 359 (362)
T d2pl5a1 324 AADKRVFYVELQSGEGHDSFLLKNPKQIEILK--GFLE 359 (362)
T ss_dssp HTTCCEEEEEECCCBSSGGGGSCCHHHHHHHH--HHHH
T ss_pred hCCCCeEEEEeCCCCCcchhccCHHHHHHHHH--HHHc
Confidence 3 4677775 5799999999999999999 6765
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=99.74 E-value=3e-17 Score=157.86 Aligned_cols=256 Identities=12% Similarity=0.077 Sum_probs=160.8
Q ss_pred eeeeecCCCCCCC-CCCeEEEeCCCCCchhh---------HHHhH---hhh-cCCeEEEEecCCCCCCC-----------
Q 012190 165 RWFCPVDCGRPLK-GSPTLLFLPGIDGLGLG---------LILHH---KPL-GKAFEVRCLHIPVYDRT----------- 219 (468)
Q Consensus 165 ~~~~y~~~g~~~~-~~p~lV~lHG~~~s~~~---------~~~~~---~~L-~~~~~V~~~D~~G~G~S----------- 219 (468)
..+.|...|...+ ..++||++|++.++... |..++ ..| .+.|.|+|+|..|.|.+
T Consensus 24 ~~laY~t~G~ln~~~~NaVlv~h~~tg~~~~~~~~~~~gWW~~liG~g~alDt~kyfVI~~n~lG~~~gSs~p~s~~p~t 103 (357)
T d2b61a1 24 INVAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSINPQT 103 (357)
T ss_dssp EEEEEEEESCCCTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBCTTT
T ss_pred ceEEEEeecccCCCCCCEEEEcCCCCccccccccCCCCCcHHHhcCCCCccCCCceEEEEecccCCccccCCcCCCCCCC
Confidence 4578888887533 35799999999998653 23333 455 56799999999997643
Q ss_pred -----------ChHHHHHHHHHHHHHHhhcCCCCcE-EEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcc
Q 012190 220 -----------PFEGLVKFVEETVRREHASSPEKPI-YLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPL 287 (468)
Q Consensus 220 -----------s~~~~~~dl~~~i~~~~~~~~~~~i-~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~ 287 (468)
++.|+++....+++++ +.+++ .++|.||||+.|+.+|.++|+.++++|.+++............
T Consensus 104 g~~~g~~FP~iti~D~v~aq~~Ll~~L----GI~~l~~viG~SmGGmqAl~wa~~~Pd~v~~~i~i~~~a~~s~~~~~~~ 179 (357)
T d2b61a1 104 GKPYGSQFPNIVVQDIVKVQKALLEHL----GISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEAIGFN 179 (357)
T ss_dssp SSBCGGGCCCCCHHHHHHHHHHHHHHT----TCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHHHHHH
T ss_pred CCCCCcccccchhHHHHHHHHHHHHHh----CcceEEEEecccHHHHHHHHHHHhhhHHHhhhcccccccccchhHHHHH
Confidence 3678888888888874 44477 5789999999999999999999999999998653321110000
Q ss_pred ---hHHHhhCchhH------------HhhHHHHhhhhc-CChhhHHHHhhccCCChhHHhhhhhhhc-------------
Q 012190 288 ---FPILKAMPDEL------------HCAVPYLLSYVM-GDPIKMAMVNIENRLPPRIKLEQLSNNL------------- 338 (468)
Q Consensus 288 ---~~~~~~~~~~~------------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 338 (468)
...+..-+.+. .......+..+. ..+. .+.+.+.+..
T Consensus 180 ~~~~~aI~~Dp~~~~G~Y~~~~~p~~GL~~Ar~~a~~ty~s~~--------------~~~~~f~r~~~~~~~~~~~~~~v 245 (357)
T d2b61a1 180 HVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDL--------------QLAKAFGRATKSDGSFWGDYFQV 245 (357)
T ss_dssp HHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHH--------------HHHHHTTTCBCTTCCTTSCCBHH
T ss_pred HHHHHHHHcCCCCCCCCcccCCCchhHHHHHHHHHHhhccCHH--------------HHHHHhccccccccccccchhhH
Confidence 00111111100 000011111110 1111 1111111100
Q ss_pred chhc-chhhhhhccCCcchhHHHHHHHHHHhH-----HHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC----C
Q 012190 339 PALL-PRLSVMSDIIPKDTLLWKLKLLKSASA-----YANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ----N 408 (468)
Q Consensus 339 ~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~----~ 408 (468)
..++ ..-..+...+....+....+.+...+. .+.+.|.+|++|+|+|..+.|.++|++ +.+.+++.++ +
T Consensus 246 esyL~~~g~kf~~rfDan~yl~l~~a~~~~D~~~~~~~l~~aL~~I~a~vLvi~~~sD~lFpp~-~~~~~a~~l~~~~~~ 324 (357)
T d2b61a1 246 ESYLSYQGKKFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPI-DLYKSKQLLEQSGVD 324 (357)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHH-HHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHhhhcccccccccHHHHHhhcCCCEEEEEeCCccccCHH-HHHHHHHHHHhcCCC
Confidence 0000 011122333555566655555554332 245678999999999999999999999 6888888775 4
Q ss_pred cEEEEeCC-CCccccccCcHHHHHHHHhcCcccc
Q 012190 409 CIVRNFKD-NGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 409 ~~~~~i~~-aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
+++++++. .||..++-+.+++.+.|+ +|+..
T Consensus 325 v~~~~I~S~~GHdafL~e~~~~~~~I~--~fL~~ 356 (357)
T d2b61a1 325 LHFYEFPSDYGHDAFLVDYDQFEKRIR--DGLAG 356 (357)
T ss_dssp EEEEEECCTTGGGHHHHCHHHHHHHHH--HHHHT
T ss_pred eEEEEECCCCCccccCcCHHHHHHHHH--HHHcc
Confidence 58888885 599999989999999999 66643
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.71 E-value=1.7e-16 Score=141.45 Aligned_cols=164 Identities=18% Similarity=0.198 Sum_probs=123.6
Q ss_pred eeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC-------------C---hHHHHHHHHH
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------------P---FEGLVKFVEE 230 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-------------s---~~~~~~dl~~ 230 (468)
++....|. ++.|+||++||.+++...|..+.+.|..++.+++++.+..+.. + +.+.++.+..
T Consensus 7 ~~~~~~~~--~~~P~vi~lHG~G~~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (203)
T d2r8ba1 7 FHKSRAGV--AGAPLFVLLHGTGGDENQFFDFGARLLPQATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMAD 84 (203)
T ss_dssp CEEEECCC--TTSCEEEEECCTTCCHHHHHHHHHHHSTTSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHH
T ss_pred EeecCCCC--CCCCEEEEECCCCCCHHHHHHHHHHhccCCeEEEeccccccccccccccccCccccchhHHHHHHHHHHH
Confidence 34444555 3689999999999999999999999988999999876644332 2 3444556666
Q ss_pred HHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhc
Q 012190 231 TVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVM 310 (468)
Q Consensus 231 ~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (468)
+++......+.++++++|||+||.+++.+|.++|+.+.++++.++.......
T Consensus 85 ~l~~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~~~~~~~~~---------------------------- 136 (203)
T d2r8ba1 85 FIKANREHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEPK---------------------------- 136 (203)
T ss_dssp HHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCCC----------------------------
T ss_pred HHHHhhhcCCCceEEEEEecCHHHHHHHHHHhhhhcccceeeeccccccccc----------------------------
Confidence 6665554456679999999999999999999999999999999875421100
Q ss_pred CChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCC
Q 012190 311 GDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKD 390 (468)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D 390 (468)
........|++++||++|
T Consensus 137 --------------------------------------------------------------~~~~~~~~~~~i~hG~~D 154 (203)
T d2r8ba1 137 --------------------------------------------------------------ISPAKPTRRVLITAGERD 154 (203)
T ss_dssp --------------------------------------------------------------CCCCCTTCEEEEEEETTC
T ss_pred --------------------------------------------------------------cccccccchhhccccCCC
Confidence 000234579999999999
Q ss_pred CCCCcHHHHHHHHHhCC----CcEEEEeCCCCcccccc
Q 012190 391 NMLPSEDEAKRLNNSLQ----NCIVRNFKDNGHTLLLE 424 (468)
Q Consensus 391 ~~v~~~~~~~~l~~~l~----~~~~~~i~~aGH~~~~e 424 (468)
+++|++ .++++.+.+. +++++++++ ||.+..+
T Consensus 155 ~~vp~~-~~~~~~~~L~~~g~~v~~~~~~g-gH~~~~~ 190 (203)
T d2r8ba1 155 PICPVQ-LTKALEESLKAQGGTVETVWHPG-GHEIRSG 190 (203)
T ss_dssp TTSCHH-HHHHHHHHHHHHSSEEEEEEESS-CSSCCHH
T ss_pred CcccHH-HHHHHHHHHHHCCCCEEEEEECC-CCcCCHH
Confidence 999999 7888887764 468888985 8987543
|
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.68 E-value=2.2e-16 Score=143.67 Aligned_cols=160 Identities=17% Similarity=0.183 Sum_probs=114.2
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCC-------------------CC---C---hHHHHHHHHHH
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYD-------------------RT---P---FEGLVKFVEET 231 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G-------------------~S---s---~~~~~~dl~~~ 231 (468)
..++|||+||+|++...|..+...+ ..++.+++++.|.+. .. + +++..+.+..+
T Consensus 20 ~~~~VI~lHG~G~~~~~~~~~~~~l~~~~~~~v~p~Ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~i~~~~~~l~~l 99 (229)
T d1fj2a_ 20 ATAAVIFLHGLGDTGHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQEDESGIKQAAENIKAL 99 (229)
T ss_dssp CSEEEEEECCSSSCHHHHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTCCBCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCHHHHHHHHHHhcCCCCEEEeCCCCCCccccCCCcccccccccccccccchhhhHHHHHHHHHHHHH
Confidence 3568999999999999999988888 667999988765221 00 1 34555566666
Q ss_pred HHHHhhc-CCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhc
Q 012190 232 VRREHAS-SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVM 310 (468)
Q Consensus 232 i~~~~~~-~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (468)
++..... .+..+++++|+|+||.+|+.++.++|+.+.++|.+++.......
T Consensus 100 i~~~~~~~i~~~ri~l~GfS~Gg~~a~~~~~~~~~~~~gvi~~sg~lp~~~~---------------------------- 151 (229)
T d1fj2a_ 100 IDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRAS---------------------------- 151 (229)
T ss_dssp HHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGG----------------------------
T ss_pred hhhhhhcCCCccceeeeecccchHHHHHHHHhhccccCcccccccccccccc----------------------------
Confidence 6654432 34678999999999999999999999999999998864311000
Q ss_pred CChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCC
Q 012190 311 GDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKD 390 (468)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D 390 (468)
+.+. .......++|++++||++|
T Consensus 152 -----------------------~~~~----------------------------------~~~~~~~~~Pvli~hG~~D 174 (229)
T d1fj2a_ 152 -----------------------FPQG----------------------------------PIGGANRDISILQCHGDCD 174 (229)
T ss_dssp -----------------------SCSS----------------------------------CCCSTTTTCCEEEEEETTC
T ss_pred -----------------------cccc----------------------------------ccccccccCceeEEEcCCC
Confidence 0000 0000233679999999999
Q ss_pred CCCCcHHHHHHHHHhC----C--CcEEEEeCCCCccccc
Q 012190 391 NMLPSEDEAKRLNNSL----Q--NCIVRNFKDNGHTLLL 423 (468)
Q Consensus 391 ~~v~~~~~~~~l~~~l----~--~~~~~~i~~aGH~~~~ 423 (468)
+++|.+ ..++..+.+ . +++++.+++.||.+..
T Consensus 175 ~~vp~~-~~~~~~~~L~~~~~~~~v~~~~~~g~gH~i~~ 212 (229)
T d1fj2a_ 175 PLVPLM-FGSLTVEKLKTLVNPANVTFKTYEGMMHSSCQ 212 (229)
T ss_dssp SSSCHH-HHHHHHHHHHHHSCGGGEEEEEETTCCSSCCH
T ss_pred CeeCHH-HHHHHHHHHHhcCCCCceEEEEeCCCCCccCH
Confidence 999998 677665544 2 5688899999998743
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.67 E-value=5.9e-16 Score=143.20 Aligned_cols=97 Identities=20% Similarity=0.210 Sum_probs=82.3
Q ss_pred CCCeEEEeCCC--CCchhhHHHhHhhhcCCeEEEEecCCCCCCC-----ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeC
Q 012190 178 GSPTLLFLPGI--DGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-----PFEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (468)
Q Consensus 178 ~~p~lV~lHG~--~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-----s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS 250 (468)
+.|+|+|+||+ +++...|..+++.|...+.|+++|+||+|.+ +++++++++.+.|... .+..|++|+|||
T Consensus 41 ~~~~l~c~~~~~~gg~~~~y~~La~~L~~~~~V~al~~pG~~~~e~~~~s~~~~a~~~~~~i~~~---~~~~P~~L~GhS 117 (255)
T d1mo2a_ 41 GEVTVICCAGTAAISGPHEFTRLAGALRGIAPVRAVPQPGYEEGEPLPSSMAAVAAVQADAVIRT---QGDKPFVVAGHS 117 (255)
T ss_dssp CSSEEEEECCCSSSCSGGGGHHHHHHHTTTCCEEEECCTTSSTTCCEESSHHHHHHHHHHHHHHT---TSSSCEEEEECS
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHhcCCCceEEEEeCCCcCCCCCCCCCHHHHHHHHHHHHHHh---CCCCCEEEEEeC
Confidence 47899999994 6778899999999988899999999999987 5888888877766542 456799999999
Q ss_pred hhHHHHHHHHHhC---CCCceEEEEeCCCC
Q 012190 251 FGGCLALAVAARN---PTIDLILILSNPAT 277 (468)
Q Consensus 251 ~GG~ia~~~a~~~---P~~v~~lVli~p~~ 277 (468)
|||.+|+.+|.+. .+.+.+++++++..
T Consensus 118 ~Gg~vA~e~A~~l~~~g~~v~~lvlld~~~ 147 (255)
T d1mo2a_ 118 AGALMAYALATELLDRGHPPRGVVLIDVYP 147 (255)
T ss_dssp TTHHHHHHHHHHHHHHTCCCSEEEEEECSC
T ss_pred CcHHHHHHHHHhhHhcCCCccEEEEECCCC
Confidence 9999999999775 46699999998743
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Probab=99.66 E-value=1e-15 Score=145.94 Aligned_cols=210 Identities=14% Similarity=0.029 Sum_probs=126.5
Q ss_pred ccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCC---------------
Q 012190 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP--------------- 220 (468)
Q Consensus 156 ~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss--------------- 220 (468)
+...||....-..+.+.+. ....|+||++||++++...+.......+++|.|+++|+||||.|.
T Consensus 60 ~~s~dG~~l~~~l~~P~~~-~~~~P~Vv~~hG~~~~~~~~~~~~~~a~~G~~v~~~D~rG~G~s~~~~~~~~~~~~~~~~ 138 (322)
T d1vlqa_ 60 FSGYRGQRIKGWLLVPKLE-EEKLPCVVQYIGYNGGRGFPHDWLFWPSMGYICFVMDTRGQGSGWLKGDTPDYPEGPVDP 138 (322)
T ss_dssp EECGGGCEEEEEEEEECCS-CSSEEEEEECCCTTCCCCCGGGGCHHHHTTCEEEEECCTTCCCSSSCCCCCBCCSSSBCC
T ss_pred EECCCCcEEEEEEEeccCC-CCCccEEEEecCCCCCcCcHHHHHHHHhCCCEEEEeeccccCCCCCCccccccccccccc
Confidence 3456676544333444332 123679999999988776665444444889999999999999872
Q ss_pred -----------------hHHHHHHHHHHHHHHhhcCC--CCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCC
Q 012190 221 -----------------FEGLVKFVEETVRREHASSP--EKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGR 281 (468)
Q Consensus 221 -----------------~~~~~~dl~~~i~~~~~~~~--~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~ 281 (468)
......+....++.+..... ..++.++|+|+||.+++..+...| ++++++...+....
T Consensus 139 ~~~~~~~~g~~~~~~~~~~~~~~d~~~a~~~~~~~~~~d~~ri~~~G~S~GG~~a~~~~~~~~-~~~a~v~~~~~~~~-- 215 (322)
T d1vlqa_ 139 QYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKALLCDVPFLCH-- 215 (322)
T ss_dssp CCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCEEEEESCCSCC--
T ss_pred cccchhhhchhhhhhhhhHHHHHHHHHHHHHHHhcCCcCchhccccccccchHHHHHHHhcCC-CccEEEEeCCcccc--
Confidence 11234455556655543322 347999999999999998888775 68888887664321
Q ss_pred CCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHH
Q 012190 282 SQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKL 361 (468)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 361 (468)
.................. .... .........
T Consensus 216 -----~~~~~~~~~~~~~~~~~~-----------------------------~~~~---------------~~~~~~~~~ 246 (322)
T d1vlqa_ 216 -----FRRAVQLVDTHPYAEITN-----------------------------FLKT---------------HRDKEEIVF 246 (322)
T ss_dssp -----HHHHHHHCCCTTHHHHHH-----------------------------HHHH---------------CTTCHHHHH
T ss_pred -----HHHHHhhccccchhhHHh-----------------------------hhhc---------------CcchhhhHH
Confidence 111111100000000000 0000 000000000
Q ss_pred HHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC-CcEEEEeCCCCccc
Q 012190 362 KLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ-NCIVRNFKDNGHTL 421 (468)
Q Consensus 362 ~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~-~~~~~~i~~aGH~~ 421 (468)
......+ ....+.++++|+|+++|++|.++|++ .+..+.+.++ +++++++|++||..
T Consensus 247 ~~~~~~d--~~~~a~~i~~P~Lv~~G~~D~~vp~~-~~~~~~~~~~~~~~l~~~p~~~H~~ 304 (322)
T d1vlqa_ 247 RTLSYFD--GVNFAARAKIPALFSVGLMDNICPPS-TVFAAYNYYAGPKEIRIYPYNNHEG 304 (322)
T ss_dssp HHHHTTC--HHHHHTTCCSCEEEEEETTCSSSCHH-HHHHHHHHCCSSEEEEEETTCCTTT
T ss_pred HHhhhhh--HHHHHhcCCCCEEEEEeCCCCCcCHH-HHHHHHHHCCCCeEEEEECCCCCCC
Confidence 0000000 11234678999999999999999999 7888888886 68999999999965
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Probab=99.66 E-value=8.9e-16 Score=142.44 Aligned_cols=163 Identities=13% Similarity=0.110 Sum_probs=124.3
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhc------CCCCcEEEEEeCh
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHAS------SPEKPIYLVGDSF 251 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~------~~~~~i~LvGhS~ 251 (468)
-|.||++||++++...+..+++.| +.||.|+++|++|++... .....++.+.++.+... ....+|.++|||+
T Consensus 52 ~P~Vv~~HG~~g~~~~~~~~a~~lA~~Gy~V~~~d~~~~~~~~-~~~~~d~~~~~~~l~~~~~~~~~vD~~rI~v~G~S~ 130 (260)
T d1jfra_ 52 FGAVVISPGFTAYQSSIAWLGPRLASQGFVVFTIDTNTTLDQP-DSRGRQLLSALDYLTQRSSVRTRVDATRLGVMGHSM 130 (260)
T ss_dssp EEEEEEECCTTCCGGGTTTHHHHHHTTTCEEEEECCSSTTCCH-HHHHHHHHHHHHHHHHTSTTGGGEEEEEEEEEEETH
T ss_pred ccEEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEeeCCCcCCc-hhhHHHHHHHHHHHHhhhhhhccccccceEEEeccc
Confidence 479999999999999999999999 778999999999988764 23344444444444332 2245799999999
Q ss_pred hHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHh
Q 012190 252 GGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKL 331 (468)
Q Consensus 252 GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (468)
||..++.++...+ ++.++|.+++....
T Consensus 131 GG~~al~aa~~~~-~~~A~v~~~~~~~~---------------------------------------------------- 157 (260)
T d1jfra_ 131 GGGGSLEAAKSRT-SLKAAIPLTGWNTD---------------------------------------------------- 157 (260)
T ss_dssp HHHHHHHHHHHCT-TCSEEEEESCCCSC----------------------------------------------------
T ss_pred cchHHHHHHhhhc-cchhheeeeccccc----------------------------------------------------
Confidence 9999999998886 57777877663210
Q ss_pred hhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC---C
Q 012190 332 EQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ---N 408 (468)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~---~ 408 (468)
..+.++++|+|+++|++|.++|++...+.+.+.++ .
T Consensus 158 -----------------------------------------~~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~~~ 196 (260)
T d1jfra_ 158 -----------------------------------------KTWPELRTPTLVVGADGDTVAPVATHSKPFYESLPGSLD 196 (260)
T ss_dssp -----------------------------------------CCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCTTSC
T ss_pred -----------------------------------------ccccccccceeEEecCCCCCCCHHHHHHHHHHhcccCCC
Confidence 01245688999999999999998734666777664 4
Q ss_pred cEEEEeCCCCccccccCcHHHHHHHHhc
Q 012190 409 CIVRNFKDNGHTLLLEEGISLLTIIKGT 436 (468)
Q Consensus 409 ~~~~~i~~aGH~~~~e~p~~~~~~I~~~ 436 (468)
.+++.++|++|+........+.+.+..|
T Consensus 197 ~~~~~i~ga~H~~~~~~~~~~~~~~~~w 224 (260)
T d1jfra_ 197 KAYLELRGASHFTPNTSDTTIAKYSISW 224 (260)
T ss_dssp EEEEEETTCCTTGGGSCCHHHHHHHHHH
T ss_pred EEEEEECCCccCCCCCChHHHHHHHHHH
Confidence 5789999999998887777777777744
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Probab=99.66 E-value=9.1e-16 Score=137.47 Aligned_cols=101 Identities=13% Similarity=0.058 Sum_probs=76.6
Q ss_pred CCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCC----C---------CCCChHH---HHHHHHHHHHHHhhc--
Q 012190 177 KGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPV----Y---------DRTPFEG---LVKFVEETVRREHAS-- 238 (468)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G----~---------G~Ss~~~---~~~dl~~~i~~~~~~-- 238 (468)
++.|+||++||++++...|..+.+.|..++.+++++.+. . |..+.++ .++++.++++.+...
T Consensus 21 ~~~p~vv~lHG~g~~~~~~~~l~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 100 (209)
T d3b5ea1 21 ESRECLFLLHGSGVDETTLVPLARRIAPTATLVAARGRIPQEDGFRWFERIDPTRFEQKSILAETAAFAAFTNEAAKRHG 100 (209)
T ss_dssp SCCCEEEEECCTTBCTTTTHHHHHHHCTTSEEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHhccCcEEEeeccCcCcccCccccccCCccccchhhHHHHHHHHHHHHHHHHHHhC
Confidence 468999999999999999999999998889999886541 1 1112222 234444444443322
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 239 SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 239 ~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
.+.++++++|||+||.+++.++.++|+.+.++++++|..
T Consensus 101 id~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~~v~~~g~~ 139 (209)
T d3b5ea1 101 LNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMP 139 (209)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCC
T ss_pred cccCCEEEEeeCChHHHHHHHHHhCCCcceEEEEeCCcc
Confidence 345689999999999999999999999999999998743
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Probab=99.65 E-value=2.3e-15 Score=133.82 Aligned_cols=154 Identities=20% Similarity=0.178 Sum_probs=114.4
Q ss_pred CCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC-------------ChH---HHHHHHHHHHHHHhhc--
Q 012190 177 KGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------------PFE---GLVKFVEETVRREHAS-- 238 (468)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-------------s~~---~~~~dl~~~i~~~~~~-- 238 (468)
++.|+||++||++++...|..+.+.+.+++.|++++.+..+.. +.+ +..+++..++..+...
T Consensus 12 ~~~P~vi~lHG~g~~~~~~~~~~~~l~~~~~vv~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 91 (202)
T d2h1ia1 12 TSKPVLLLLHGTGGNELDLLPLAEIVDSEASVLSVRGNVLENGMPRFFRRLAEGIFDEEDLIFRTKELNEFLDEAAKEYK 91 (202)
T ss_dssp TTSCEEEEECCTTCCTTTTHHHHHHHHTTSCEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHhccCCceeeecccccCCCCccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhcc
Confidence 3589999999999999999999999988999999876543322 222 2333444444443332
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHH
Q 012190 239 SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAM 318 (468)
Q Consensus 239 ~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (468)
....++.++|+|+||.+++.+|.++|+.+.++++.++.......
T Consensus 92 ~d~~~i~~~G~S~Gg~~a~~la~~~~~~~~~~~~~~~~~~~~~~------------------------------------ 135 (202)
T d2h1ia1 92 FDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRGM------------------------------------ 135 (202)
T ss_dssp CCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSSC------------------------------------
T ss_pred ccccceeeecccccchHHHHHHHhccccccceeeecCCCCcccc------------------------------------
Confidence 23569999999999999999999999999999998874311000
Q ss_pred HhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHH
Q 012190 319 VNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDE 398 (468)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~ 398 (468)
........|+++++|++|.++|++ .
T Consensus 136 ------------------------------------------------------~~~~~~~~~~~i~~G~~D~~vp~~-~ 160 (202)
T d2h1ia1 136 ------------------------------------------------------QLANLAGKSVFIAAGTNDPICSSA-E 160 (202)
T ss_dssp ------------------------------------------------------CCCCCTTCEEEEEEESSCSSSCHH-H
T ss_pred ------------------------------------------------------cccccccchhhcccccCCCccCHH-H
Confidence 011344679999999999999999 6
Q ss_pred HHHHHHhCC----CcEEEEeCCCCcccc
Q 012190 399 AKRLNNSLQ----NCIVRNFKDNGHTLL 422 (468)
Q Consensus 399 ~~~l~~~l~----~~~~~~i~~aGH~~~ 422 (468)
.+++.+.+. +.+++.+|+ ||.+.
T Consensus 161 ~~~~~~~l~~~g~~~~~~~~~g-gH~~~ 187 (202)
T d2h1ia1 161 SEELKVLLENANANVTMHWENR-GHQLT 187 (202)
T ss_dssp HHHHHHHHHTTTCEEEEEEESS-TTSCC
T ss_pred HHHHHHHHHHCCCCEEEEEECC-CCcCC
Confidence 888887764 468888985 89764
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.62 E-value=1.8e-14 Score=133.00 Aligned_cols=88 Identities=9% Similarity=0.002 Sum_probs=67.9
Q ss_pred CCCeEEEeCCCC-----CchhhHHH----hHhhh-cCCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEE
Q 012190 178 GSPTLLFLPGID-----GLGLGLIL----HHKPL-GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLV 247 (468)
Q Consensus 178 ~~p~lV~lHG~~-----~s~~~~~~----~~~~L-~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~Lv 247 (468)
+.|+||++||.+ .+...|.. +...+ ..+|.|+++|+|..+..++.+..+|+.+.++.+....+.++++|+
T Consensus 30 ~~~~vv~iHGGg~~~~~~~~~~~~~~~~~l~~~~~~~g~~v~~~dYrl~p~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~ 109 (263)
T d1vkha_ 30 TREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEITNPRNLYDAVSNITRLVKEKGLTNINMV 109 (263)
T ss_dssp CCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHHHTCCCEEEE
T ss_pred CCcEEEEECCCCccCCCCCcchHHHHHHHHHHHHHhCCeEEEEeccccCcchhhhHHHHhhhhhhhcccccccccceeee
Confidence 578999999953 22333333 33444 668999999999988888777777877777777666677799999
Q ss_pred EeChhHHHHHHHHHhCCC
Q 012190 248 GDSFGGCLALAVAARNPT 265 (468)
Q Consensus 248 GhS~GG~ia~~~a~~~P~ 265 (468)
|||+||.+|+.++...++
T Consensus 110 G~S~Gg~lal~~a~~~~~ 127 (263)
T d1vkha_ 110 GHSVGATFIWQILAALKD 127 (263)
T ss_dssp EETHHHHHHHHHHTGGGS
T ss_pred ccCcHHHHHHHHHHhccC
Confidence 999999999999887654
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Probab=99.60 E-value=4.5e-15 Score=140.20 Aligned_cols=101 Identities=15% Similarity=0.051 Sum_probs=88.1
Q ss_pred CCCCeEEEeCCCCCchhh--HHHhHhhh-cCCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhH
Q 012190 177 KGSPTLLFLPGIDGLGLG--LILHHKPL-GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGG 253 (468)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~--~~~~~~~L-~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG 253 (468)
...++|||+||++++... |..+.+.| ..+|.|+.+|+||+|.++.+.-++++.+.++.+....+.++|.||||||||
T Consensus 29 ~~~~PVvlvHG~~~~~~~~~~~~~~~~L~~~Gy~v~~~d~~g~g~~d~~~sae~la~~i~~v~~~~g~~kV~lVGhS~GG 108 (317)
T d1tcaa_ 29 SVSKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLNDTQVNTEYMVNAITALYAGSGNNKLPVLTWSQGG 108 (317)
T ss_dssp SCSSEEEEECCTTCCHHHHHTTTHHHHHHTTTCEEEEECCTTTTCSCHHHHHHHHHHHHHHHHHHTTSCCEEEEEETHHH
T ss_pred CCCCcEEEECCCCCCCcchhHHHHHHHHHhCCCeEEEecCCCCCCCchHhHHHHHHHHHHHHHHhccCCceEEEEeCchH
Confidence 345679999999988765 45678888 678999999999999999998899999998888877778899999999999
Q ss_pred HHHHHHHHhCC---CCceEEEEeCCCC
Q 012190 254 CLALAVAARNP---TIDLILILSNPAT 277 (468)
Q Consensus 254 ~ia~~~a~~~P---~~v~~lVli~p~~ 277 (468)
.++..++.++| ++|..+|.+++..
T Consensus 109 ~~a~~~l~~~p~~~~~V~~~v~i~~~~ 135 (317)
T d1tcaa_ 109 LVAQWGLTFFPSIRSKVDRLMAFAPDY 135 (317)
T ss_dssp HHHHHHHHHCGGGTTTEEEEEEESCCT
T ss_pred HHHHHHHHHCCCcchheeEEEEeCCCC
Confidence 99999999988 5799999999864
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Probab=99.59 E-value=5.9e-16 Score=125.13 Aligned_cols=91 Identities=19% Similarity=0.202 Sum_probs=75.0
Q ss_pred CCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC-----ChHHHHHHHHHHH
Q 012190 158 KPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-----PFEGLVKFVEETV 232 (468)
Q Consensus 158 ~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-----s~~~~~~dl~~~i 232 (468)
..+|.. ++|...|+ +|+|||+||.. .. +.+.|+++|+|+++|+||||.| +.+++++++.+++
T Consensus 7 ~~~G~~---l~y~~~G~----G~pvlllHG~~---~~---w~~~L~~~yrvi~~DlpG~G~S~~p~~s~~~~a~~i~~ll 73 (122)
T d2dsta1 7 HLYGLN---LVFDRVGK----GPPVLLVAEEA---SR---WPEALPEGYAFYLLDLPGYGRTEGPRMAPEELAHFVAGFA 73 (122)
T ss_dssp EETTEE---EEEEEECC----SSEEEEESSSG---GG---CCSCCCTTSEEEEECCTTSTTCCCCCCCHHHHHHHHHHHH
T ss_pred EECCEE---EEEEEEcC----CCcEEEEeccc---cc---ccccccCCeEEEEEeccccCCCCCcccccchhHHHHHHHH
Confidence 334444 68889987 88999999843 22 3566889999999999999999 4899999999999
Q ss_pred HHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCC
Q 012190 233 RREHASSPEKPIYLVGDSFGGCLALAVAARNPT 265 (468)
Q Consensus 233 ~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~ 265 (468)
+.+. .++.+++||||||.+++.+++..+.
T Consensus 74 ~~L~----i~~~~viG~S~Gg~ia~~laa~~~~ 102 (122)
T d2dsta1 74 VMMN----LGAPWVLLRGLGLALGPHLEALGLR 102 (122)
T ss_dssp HHTT----CCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred HHhC----CCCcEEEEeCccHHHHHHHHhhccc
Confidence 9954 4478999999999999999997643
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Probab=99.58 E-value=4.8e-18 Score=161.28 Aligned_cols=86 Identities=9% Similarity=-0.014 Sum_probs=59.3
Q ss_pred CCCeEEEeCCCCCchhhHHHh-------Hhhh-cCCeEEEEecCCCCCCCChHHHH-------HHHHHHHHHHhhcCCCC
Q 012190 178 GSPTLLFLPGIDGLGLGLILH-------HKPL-GKAFEVRCLHIPVYDRTPFEGLV-------KFVEETVRREHASSPEK 242 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~-------~~~L-~~~~~V~~~D~~G~G~Ss~~~~~-------~dl~~~i~~~~~~~~~~ 242 (468)
++++|||+||++.++..|... ++.+ +++|+|+++|+||||+|+.+... +++.+.++.+. ....
T Consensus 57 ~~~PvvllHG~~~~~~~w~~~~~~~~~~~~~~~~~Gy~V~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~~--~~~~ 134 (318)
T d1qlwa_ 57 KRYPITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLGKAPASSLPDLF--AAGH 134 (318)
T ss_dssp CSSCEEEECCTTCCGGGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHTTSSCGGGSCCCB--CCCH
T ss_pred CCCcEEEECCCCCCcCccccCcccchhHHHHHHhCCCEEEEecCCCCCCCCCccccCCHHHHHHHHHHHHHHHh--hccc
Confidence 356799999999999988653 4445 88999999999999999643222 22222222211 1123
Q ss_pred cEEEEEeChhHHHHHHHHHhCCC
Q 012190 243 PIYLVGDSFGGCLALAVAARNPT 265 (468)
Q Consensus 243 ~i~LvGhS~GG~ia~~~a~~~P~ 265 (468)
+..++|||+||.++..++...+.
T Consensus 135 ~~~~~g~s~G~~~~~~~~~~~~~ 157 (318)
T d1qlwa_ 135 EAAWAIFRFGPRYPDAFKDTQFP 157 (318)
T ss_dssp HHHHHHTTSSSBTTBCCTTCCSC
T ss_pred ccccccccchhHHHHHHhhhcCc
Confidence 56678999999998877766543
|
| >d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Uncharacterized protein TM1040 2492 species: Silicibacter sp. tm1040 [TaxId: 292414]
Probab=99.57 E-value=2.3e-14 Score=132.65 Aligned_cols=176 Identities=13% Similarity=0.054 Sum_probs=123.5
Q ss_pred CCCeEEEeCCC---CCchhhHHHhHhhh-cCCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhH
Q 012190 178 GSPTLLFLPGI---DGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGG 253 (468)
Q Consensus 178 ~~p~lV~lHG~---~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG 253 (468)
..|+|||+||. .++...+..++..| ..||.|+++|+|..+..++.+..+|+.+.++.+....+ .+|+|+|||.||
T Consensus 61 ~~P~vv~iHGG~w~~g~~~~~~~~a~~l~~~G~~Vv~~~YRl~p~~~~p~~~~d~~~a~~~~~~~~~-~rI~l~G~SaGG 139 (261)
T d2pbla1 61 PVGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPEVRISEITQQISQAVTAAAKEID-GPIVLAGHSAGG 139 (261)
T ss_dssp CSEEEEEECCSTTTSCCGGGCGGGGHHHHHTTEEEEEECCCCTTTSCHHHHHHHHHHHHHHHHHHSC-SCEEEEEETHHH
T ss_pred CCCeEEEECCCCCccCChhHhhhHHHHHhcCCceeecccccccccccCchhHHHHHHHHHHHHhccc-CceEEEEcchHH
Confidence 47899999995 35556677777878 78999999999999999999999999999988887654 589999999999
Q ss_pred HHHHHHHHhCC------CCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCCh
Q 012190 254 CLALAVAARNP------TIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPP 327 (468)
Q Consensus 254 ~ia~~~a~~~P------~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (468)
.+++.++.... ..+++++++++........... ... .+ ..++
T Consensus 140 ~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~---~~--------------~~~~ 187 (261)
T d2pbla1 140 HLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLRTS---------------MNE---KF--------------KMDA 187 (261)
T ss_dssp HHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGGST---------------THH---HH--------------CCCH
T ss_pred HHHHHHhcCcccccchhhchhhhhccccccccchhhhhh---------------hcc---cc--------------cCCH
Confidence 99987765432 3578888888755331110000 000 00 0000
Q ss_pred hHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC
Q 012190 328 RIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ 407 (468)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~ 407 (468)
+ .... . .+ .........|+++++|++|..++.+ .++.+.+.+
T Consensus 188 ~----~~~~---------------~--------------SP---~~~~~~~~~P~li~~G~~D~~~~~~-qs~~~~~~l- 229 (261)
T d2pbla1 188 D----AAIA---------------E--------------SP---VEMQNRYDAKVTVWVGGAERPAFLD-QAIWLVEAW- 229 (261)
T ss_dssp H----HHHH---------------T--------------CG---GGCCCCCSCEEEEEEETTSCHHHHH-HHHHHHHHH-
T ss_pred H----HHHH---------------h--------------Cc---hhhcccCCCeEEEEEecCCCchHHH-HHHHHHHHh-
Confidence 0 0000 0 00 1223567899999999999887777 688888877
Q ss_pred CcEEEEeCCCCcccccc
Q 012190 408 NCIVRNFKDNGHTLLLE 424 (468)
Q Consensus 408 ~~~~~~i~~aGH~~~~e 424 (468)
+++.+.+++.+||-.++
T Consensus 230 ~~~~~~~~~~~HF~vi~ 246 (261)
T d2pbla1 230 DADHVIAFEKHHFNVIE 246 (261)
T ss_dssp TCEEEEETTCCTTTTTG
T ss_pred CCCceEeCCCCchhHHH
Confidence 57888999999975543
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.56 E-value=1.4e-13 Score=123.77 Aligned_cols=169 Identities=15% Similarity=0.143 Sum_probs=122.2
Q ss_pred CCCeEEEeCCC---CCchh--hHHHhHhhh-cCCeEEEEecCCCCCCCC-----hHHHHHHHHHHHHHHhhcC-CCCcEE
Q 012190 178 GSPTLLFLPGI---DGLGL--GLILHHKPL-GKAFEVRCLHIPVYDRTP-----FEGLVKFVEETVRREHASS-PEKPIY 245 (468)
Q Consensus 178 ~~p~lV~lHG~---~~s~~--~~~~~~~~L-~~~~~V~~~D~~G~G~Ss-----~~~~~~dl~~~i~~~~~~~-~~~~i~ 245 (468)
..|++|++||. +++.. ....+++.| ..+|.|+.+|+||.|.|. .....+|...+++...... ...+++
T Consensus 23 ~~~~~l~~Hp~p~~GG~~~~~~~~~~a~~l~~~G~~~lrfn~RG~g~S~G~~~~~~~e~~d~~aa~~~~~~~~~~~~~~~ 102 (218)
T d2i3da1 23 SAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEFDHGAGELSDAASALDWVQSLHPDSKSCW 102 (218)
T ss_dssp TCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCCCSSHHHHHHHHHHHHHHHHHCTTCCCEE
T ss_pred CCCEEEEECCCcCcCCcCCcHHHHHHHHHHHhcCeeEEEEecCccCCCccccccchhHHHHHHHHHhhhhccccccccee
Confidence 36899999984 44433 345566767 779999999999999993 2334455555565555443 246899
Q ss_pred EEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCC
Q 012190 246 LVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRL 325 (468)
Q Consensus 246 LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (468)
++|+|+||.+++.++.+.+ .+.+++++.+......
T Consensus 103 ~~g~S~G~~~a~~~a~~~~-~~~~~~~~~~~~~~~~-------------------------------------------- 137 (218)
T d2i3da1 103 VAGYSFGAWIGMQLLMRRP-EIEGFMSIAPQPNTYD-------------------------------------------- 137 (218)
T ss_dssp EEEETHHHHHHHHHHHHCT-TEEEEEEESCCTTTSC--------------------------------------------
T ss_pred EEeeehHHHHHHHHHHhhc-cccceeeccccccccc--------------------------------------------
Confidence 9999999999999998874 5667888766432100
Q ss_pred ChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHh
Q 012190 326 PPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNS 405 (468)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~ 405 (468)
...+....+|+|+++|++|.+++.. ....+.+.
T Consensus 138 ----------------------------------------------~~~~~~~~~p~l~i~g~~D~~~~~~-~~~~l~~~ 170 (218)
T d2i3da1 138 ----------------------------------------------FSFLAPCPSSGLIINGDADKVAPEK-DVNGLVEK 170 (218)
T ss_dssp ----------------------------------------------CTTCTTCCSCEEEEEETTCSSSCHH-HHHHHHHH
T ss_pred ----------------------------------------------hhhccccCCCceeeecccceecChH-HHHHHHHH
Confidence 0122455789999999999999999 67777665
Q ss_pred CC-----CcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 406 LQ-----NCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 406 l~-----~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
+. ..++++++|++|+.. .+-+++.+.+. +|+.+
T Consensus 171 ~~~~~~~~~~~~vi~gAdHfF~-g~~~~l~~~v~--~~l~~ 208 (218)
T d2i3da1 171 LKTQKGILITHRTLPGANHFFN-GKVDELMGECE--DYLDR 208 (218)
T ss_dssp HTTSTTCCEEEEEETTCCTTCT-TCHHHHHHHHH--HHHHH
T ss_pred HhhccCCCccEEEeCCCCCCCc-CCHHHHHHHHH--HHHHH
Confidence 43 458999999999876 57788888888 44543
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.56 E-value=1.5e-14 Score=133.54 Aligned_cols=221 Identities=14% Similarity=0.030 Sum_probs=129.1
Q ss_pred ccCCCCCCceeeeecCCC-CCCCCCCeEEEeCCCCCc-----hhhHHHhHhhh-cCCeEEEEecCCCCCCCCh-------
Q 012190 156 IIKPDGGPPRWFCPVDCG-RPLKGSPTLLFLPGIDGL-----GLGLILHHKPL-GKAFEVRCLHIPVYDRTPF------- 221 (468)
Q Consensus 156 ~~~~dg~~~~~~~y~~~g-~~~~~~p~lV~lHG~~~s-----~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss~------- 221 (468)
++..+|...+..-+.+.+ .+.+.-|+||++||.++. ...+......+ .++|.|+.+|+||.+....
T Consensus 8 ~~~~~~~~~~~~l~lP~~~~~~kk~P~iv~~HGGp~~~~~~~~~~~~~~~~~~a~~g~~V~~~d~rg~~~~~~~~~~~~~ 87 (258)
T d2bgra2 8 FIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAIN 87 (258)
T ss_dssp EEEETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSCHHHHGGGT
T ss_pred EEEeCCcEEEEEEEECCCcCCCCCeeEEEEEcCCCCcccCCCccCcCHHHHHHhcCCcEEEeecccccCCcchHHHHhhh
Confidence 344566554444444444 222234899999994222 11222223334 6789999999999875531
Q ss_pred ----HHHHHHHHHHHHHHhhcCC--CCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCc
Q 012190 222 ----EGLVKFVEETVRREHASSP--EKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMP 295 (468)
Q Consensus 222 ----~~~~~dl~~~i~~~~~~~~--~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~ 295 (468)
....+++.++++.+..... .+++.++|+|+||.+++.++..+|+.+...+..++....... .
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~id~~~i~i~G~S~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~ 155 (258)
T d2bgra2 88 RRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYY------------D 155 (258)
T ss_dssp TCTTSHHHHHHHHHHHHHTTSSSEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGGS------------B
T ss_pred hhhhhHHHHHHHHHHHHhhhhcccccccccccCcchhhcccccccccCCCcceEEEEeecccccccc------------c
Confidence 1234555666666554322 347999999999999999999999988888776653321100 0
Q ss_pred hhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhc
Q 012190 296 DELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRL 375 (468)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l 375 (468)
..... ...+.+ .... ..+..... . .....
T Consensus 156 ~~~~~-------~~~~~~---------~~~~----~~~~~~~~--------------~-----------------~~~~~ 184 (258)
T d2bgra2 156 SVYTE-------RYMGLP---------TPED----NLDHYRNS--------------T-----------------VMSRA 184 (258)
T ss_dssp HHHHH-------HHHCCC---------STTT----THHHHHHS--------------C-----------------SGGGG
T ss_pred ccccc-------hhcccc---------cchh----hHHHhhcc--------------c-----------------ccccc
Confidence 00000 000000 0000 00000000 0 00112
Q ss_pred ccC-CceEEEEEeCCCCCCCcHHHHHHHHHhC----CCcEEEEeCCCCccccc-cCcHHHHHHHHhcCccccc
Q 012190 376 HAV-KAEVLVLASGKDNMLPSEDEAKRLNNSL----QNCIVRNFKDNGHTLLL-EEGISLLTIIKGTCKYRRS 442 (468)
Q Consensus 376 ~~i-~~PvLlI~G~~D~~v~~~~~~~~l~~~l----~~~~~~~i~~aGH~~~~-e~p~~~~~~I~~~~F~~r~ 442 (468)
.++ ++|+|++||++|..+|+. .++++.+.+ .+++++++|+++|.+.. +...++.+.+. +|+++.
T Consensus 185 ~~~~~~P~li~hG~~D~~Vp~~-~s~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~i~--~fl~~~ 254 (258)
T d2bgra2 185 ENFKQVEYLLIHGTADDNVHFQ-QSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMS--HFIKQC 254 (258)
T ss_dssp GGGGGSEEEEEEETTCSSSCTH-HHHHHHHHHHHHTCCCEEEEETTCCTTCCSHHHHHHHHHHHH--HHHHHH
T ss_pred cccccCChheeeecCCCcccHH-HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCccHHHHHHHHH--HHHHHH
Confidence 233 479999999999999998 688877665 36799999999997533 34556666666 577664
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Probab=99.52 E-value=1.4e-13 Score=125.14 Aligned_cols=175 Identities=18% Similarity=0.208 Sum_probs=118.9
Q ss_pred ccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC---------------
Q 012190 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT--------------- 219 (468)
Q Consensus 156 ~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S--------------- 219 (468)
+...||.....+-+.+.+. +.|.||++|+..|........++.| +.+|.|+++|+.|.+..
T Consensus 8 ~~~~dg~~~~a~~~~P~~~---~~P~vl~~h~~~G~~~~~~~~a~~lA~~Gy~vl~pd~~~~~~~~~~~~~~~~~~~~~~ 84 (233)
T d1dina_ 8 IQSYDGHTFGALVGSPAKA---PAPVIVIAQEIFGVNAFMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQDERQREQA 84 (233)
T ss_dssp EECTTSCEECEEEECCSSS---SEEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTSHHHHHHH
T ss_pred EEcCCCCEEEEEEECCCCC---CceEEEEeCCCCCCCHHHHHHHHHHHhcCCcceeeeeccCCCcCcccChHHHHHHHHH
Confidence 4455665533333333433 4789999998777666677778888 67999999998654432
Q ss_pred -------ChHHHHHHHHHHHHHHhhcC-CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHH
Q 012190 220 -------PFEGLVKFVEETVRREHASS-PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPIL 291 (468)
Q Consensus 220 -------s~~~~~~dl~~~i~~~~~~~-~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~ 291 (468)
+.+....++...++.+.... ...+|.++|+|+||.+++.++.+. .+.+.+...+....
T Consensus 85 ~~~~~~~~~~~~~~d~~aa~~~l~~~~~~~~~i~~~G~s~Gg~~a~~~a~~~--~~~~~~~~~~~~~~------------ 150 (233)
T d1dina_ 85 YKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYCLGGALAFLVAAKG--YVDRAVGYYGVGLE------------ 150 (233)
T ss_dssp HHHHHTCCHHHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHHHT--CSSEEEEESCSCGG------------
T ss_pred HHHhhhhhhHHHHHHHHHHHHHHHhCCCCCCceEEEEecccccceeeccccc--ccceeccccccccc------------
Confidence 24455667777777665332 245899999999999999888764 34444443221100
Q ss_pred hhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHH
Q 012190 292 KAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYA 371 (468)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 371 (468)
..
T Consensus 151 ----------------------------------------~~-------------------------------------- 152 (233)
T d1dina_ 151 ----------------------------------------KQ-------------------------------------- 152 (233)
T ss_dssp ----------------------------------------GG--------------------------------------
T ss_pred ----------------------------------------cc--------------------------------------
Confidence 00
Q ss_pred hhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhC---CCcEEEEeCCCCccccccCc
Q 012190 372 NSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSL---QNCIVRNFKDNGHTLLLEEG 426 (468)
Q Consensus 372 ~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l---~~~~~~~i~~aGH~~~~e~p 426 (468)
.+...++++|+|+++|++|+.+|.+ ..+.+.+.+ ++++++++||++|.+..+..
T Consensus 153 ~~~~~~i~~Pvl~~~G~~D~~vp~e-~~~~~~~~~~~~~~~~~~~y~ga~HgF~~~~~ 209 (233)
T d1dina_ 153 LNKVPEVKHPALFHMGGQDHFVPAP-SRQLITEGFGANPLLQVHWYEEAGHSFARTSS 209 (233)
T ss_dssp GGGGGGCCSCEEEEEETTCTTSCHH-HHHHHHHHHTTCTTEEEEEETTCCTTTTCTTS
T ss_pred hhhhhccCCcceeeecccccCCCHH-HHHHHHHHHhcCCCEEEEEECCCCcCCCCCCC
Confidence 0123568899999999999999988 577776654 36799999999998765443
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Probab=99.48 E-value=2.4e-14 Score=136.70 Aligned_cols=95 Identities=17% Similarity=0.219 Sum_probs=80.0
Q ss_pred CCeEEEeCCCCCchh------hHHHhHhhh-cCCeEEEEecCCCCCCCC-----hHHHHHHHHHHHHHHhhcCCCCcEEE
Q 012190 179 SPTLLFLPGIDGLGL------GLILHHKPL-GKAFEVRCLHIPVYDRTP-----FEGLVKFVEETVRREHASSPEKPIYL 246 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~------~~~~~~~~L-~~~~~V~~~D~~G~G~Ss-----~~~~~~dl~~~i~~~~~~~~~~~i~L 246 (468)
+.||||+||++++.. .|..+.+.| ..+|+|+++|+||+|.|+ .+++++++.++++. .+.+++++
T Consensus 8 k~PvvlvHG~~g~~~~~~~~~~~~~~~~~L~~~G~~V~~~~~~g~g~s~~~~~~~~~l~~~i~~~~~~----~~~~~v~l 83 (319)
T d1cvla_ 8 RYPVILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGPNGRGEQLLAYVKQVLAA----TGATKVNL 83 (319)
T ss_dssp SSCEEEECCTTBSSEETTTEESSTTHHHHHHHTTCCEEECCCBCSSCTTSTTSHHHHHHHHHHHHHHH----HCCSCEEE
T ss_pred CCCEEEECCCCCCcchhhhhhhHHHHHHHHHHCCCEEEEecCCCCCCCCCCcccHHHHHHHHHHHHHH----hCCCCEEE
Confidence 556899999988765 367788888 567999999999999884 56666777777766 45669999
Q ss_pred EEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 247 VGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 247 vGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
|||||||.++..++.++|+++.++|+++++.
T Consensus 84 vGhS~GG~~~~~~~~~~p~~v~~vv~i~~p~ 114 (319)
T d1cvla_ 84 IGHSQGGLTSRYVAAVAPQLVASVTTIGTPH 114 (319)
T ss_dssp EEETTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred EeccccHHHHHHHHHHCccccceEEEECCCC
Confidence 9999999999999999999999999998854
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.45 E-value=9.7e-14 Score=127.99 Aligned_cols=198 Identities=15% Similarity=0.051 Sum_probs=115.2
Q ss_pred CCCeEEEeCCCCCch---hhHH--HhHhhh-cCCeEEEEecCCCCCCCC-----------hHHHHHHHHHHHHHHhhcCC
Q 012190 178 GSPTLLFLPGIDGLG---LGLI--LHHKPL-GKAFEVRCLHIPVYDRTP-----------FEGLVKFVEETVRREHASSP 240 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~---~~~~--~~~~~L-~~~~~V~~~D~~G~G~Ss-----------~~~~~~dl~~~i~~~~~~~~ 240 (468)
.-|+||++||.+++. ..|. .....| ++||.|+++|+||.+... .....+|+.++++.+.....
T Consensus 30 k~Pviv~~HGGp~~~~~~~~~~~~~~~~~la~~G~~vv~~d~rGs~~~g~~~~~~~~~~~g~~~~~d~~~~i~~l~~~~~ 109 (258)
T d1xfda2 30 HYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQY 109 (258)
T ss_dssp CEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHHHHHTTTTCTTTHHHHHHHHHHHHHHSSSS
T ss_pred ceeEEEEEcCCccccCcCCCcCcchHHHHHhcCCcEEEEeccccccccchhHhhhhhccchhHHHHHHHHhhhhhccccc
Confidence 358999999963321 2222 223345 568999999999865331 12335667777777654422
Q ss_pred --CCcEEEEEeChhHHHHHHHHHhCCC----CceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChh
Q 012190 241 --EKPIYLVGDSFGGCLALAVAARNPT----IDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPI 314 (468)
Q Consensus 241 --~~~i~LvGhS~GG~ia~~~a~~~P~----~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (468)
..+|.++|||+||.+++.++...++ .+...+..++........ . .. ....+. .+
T Consensus 110 id~~ri~v~G~S~GG~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~----------~~~~~~----~~- 169 (258)
T d1xfda2 110 IDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYA---S--AF----------SERYLG----LH- 169 (258)
T ss_dssp EEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSSB---H--HH----------HHHHHC----CC-
T ss_pred ccccceeccccCchHHHHHHHHhcCCcccceeeeeeeccccceeeeccc---c--cc----------cccccc----cc-
Confidence 4579999999999999988766554 455666665543221100 0 00 000000 00
Q ss_pred hHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcc-cCCceEEEEEeCCCCCC
Q 012190 315 KMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLH-AVKAEVLVLASGKDNML 393 (468)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~-~i~~PvLlI~G~~D~~v 393 (468)
.. .... +...... ..+. ..++|+|++||+.|..+
T Consensus 170 ---------~~-----~~~~-----------------~~~~s~~--------------~~~~~~~~~p~Li~hG~~D~~v 204 (258)
T d1xfda2 170 ---------GL-----DNRA-----------------YEMTKVA--------------HRVSALEEQQFLIIHPTADEKI 204 (258)
T ss_dssp ---------SS-----CCSS-----------------TTTTCTH--------------HHHTSCCSCEEEEEEETTCSSS
T ss_pred ---------cc-----chHH-----------------hhccchh--------------hhhhhhhcccccccccCCCCCc
Confidence 00 0000 0000000 0112 24789999999999999
Q ss_pred CcHHHHHHHHHhC----CCcEEEEeCCCCcccccc-CcHHHHHHHHhcCcccccC
Q 012190 394 PSEDEAKRLNNSL----QNCIVRNFKDNGHTLLLE-EGISLLTIIKGTCKYRRSR 443 (468)
Q Consensus 394 ~~~~~~~~l~~~l----~~~~~~~i~~aGH~~~~e-~p~~~~~~I~~~~F~~r~~ 443 (468)
|++ ...++.+.+ .+.+++++|+++|.+... ....+.+.+. +|++++-
T Consensus 205 p~~-~s~~~~~~l~~~~~~~~~~~~p~~~H~~~~~~~~~~~~~~~~--~f~~~~~ 256 (258)
T d1xfda2 205 HFQ-HTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSII--NFFVECF 256 (258)
T ss_dssp CHH-HHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHH--HHHTTTT
T ss_pred CHH-HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCcCHHHHHHHHH--HHHHHhh
Confidence 998 677776654 367899999999976443 3344555666 5666654
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.41 E-value=1.4e-12 Score=117.11 Aligned_cols=157 Identities=15% Similarity=0.183 Sum_probs=103.6
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhcC---CeEEEEecCCC--------CC---------CC-----C---hHHHHHHHH
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLGK---AFEVRCLHIPV--------YD---------RT-----P---FEGLVKFVE 229 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~---~~~V~~~D~~G--------~G---------~S-----s---~~~~~~dl~ 229 (468)
.+++||++||+|++...|..+.+.|.. .+.+++++.|. .. .+ + ++...+.+.
T Consensus 13 ~~~~Vi~lHG~G~~~~~~~~~~~~l~~~~~~~~~i~p~ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~v~ 92 (218)
T d1auoa_ 13 ADACVIWLHGLGADRYDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELEVSAKMVT 92 (218)
T ss_dssp CSEEEEEECCTTCCTTTTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHHHHHHHHHHH
T ss_pred CCeEEEEEcCCCCChhhHHHHHHHHHHhCCCcEEEccCCCccccccCCCcccCcccccccccccccchHHHHHHHHHHHH
Confidence 366899999999999999888888743 45666655431 10 00 1 233334444
Q ss_pred HHHHHHhh-cCCCCcEEEEEeChhHHHHHHHHHh-CCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhh
Q 012190 230 ETVRREHA-SSPEKPIYLVGDSFGGCLALAVAAR-NPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLS 307 (468)
Q Consensus 230 ~~i~~~~~-~~~~~~i~LvGhS~GG~ia~~~a~~-~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (468)
++++.... ....++++++|+|+||++|+.++.. .+..+.++|++++........
T Consensus 93 ~li~~~~~~~i~~~ri~l~GfSqGg~~a~~~~l~~~~~~~~~~v~~~g~~~~~~~~------------------------ 148 (218)
T d1auoa_ 93 DLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTFGDE------------------------ 148 (218)
T ss_dssp HHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTCCTT------------------------
T ss_pred HHHHHHHHhCCCCcceEEeeeCcchHHHHHHHHhcccccceeeeeccccCcccccc------------------------
Confidence 45443321 2345789999999999999988765 466788999987632110000
Q ss_pred hhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEe
Q 012190 308 YVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLAS 387 (468)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G 387 (468)
... .....++|++++||
T Consensus 149 --------------------------------------------~~~-------------------~~~~~~~pvl~~hG 165 (218)
T d1auoa_ 149 --------------------------------------------LEL-------------------SASQQRIPALCLHG 165 (218)
T ss_dssp --------------------------------------------CCC-------------------CHHHHTCCEEEEEE
T ss_pred --------------------------------------------ccc-------------------chhccCCCEEEEec
Confidence 000 00122579999999
Q ss_pred CCCCCCCcHHHHHHHHHhCC----CcEEEEeCCCCccccc
Q 012190 388 GKDNMLPSEDEAKRLNNSLQ----NCIVRNFKDNGHTLLL 423 (468)
Q Consensus 388 ~~D~~v~~~~~~~~l~~~l~----~~~~~~i~~aGH~~~~ 423 (468)
++|.++|.+ ..++..+.+. +++++.++ +||.+..
T Consensus 166 ~~D~vvp~~-~~~~~~~~L~~~g~~~~~~~~~-~gH~i~~ 203 (218)
T d1auoa_ 166 QYDDVVQNA-MGRSAFEHLKSRGVTVTWQEYP-MGHEVLP 203 (218)
T ss_dssp TTCSSSCHH-HHHHHHHHHHTTTCCEEEEEES-CSSSCCH
T ss_pred CCCCccCHH-HHHHHHHHHHHCCCCEEEEEEC-CCCccCH
Confidence 999999998 6877777653 56888887 6997743
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.41 E-value=2e-13 Score=127.68 Aligned_cols=95 Identities=22% Similarity=0.191 Sum_probs=76.9
Q ss_pred CCeEEEeCCCCCchh-----hHHHhHhhh-cCCeEEEEecCCCCCCCC--hHHHHHHHHHHHHHHhhcCCCCcEEEEEeC
Q 012190 179 SPTLLFLPGIDGLGL-----GLILHHKPL-GKAFEVRCLHIPVYDRTP--FEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~-----~~~~~~~~L-~~~~~V~~~D~~G~G~Ss--~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS 250 (468)
+.||||+||++++.. .|..+.+.| ..+|+|+++|+||+|.+. .+++.+++.++++. .+.+++++||||
T Consensus 7 ~~PvvlvHG~~g~~~~~~~~yw~~i~~~L~~~G~~v~~~~~~~~~~~~~~a~~l~~~i~~~~~~----~g~~~v~ligHS 82 (285)
T d1ex9a_ 7 KYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSEVRGEQLLQQVEEIVAL----SGQPKVNLIGHS 82 (285)
T ss_dssp SSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCHHHHHHHHHHHHHHHHHH----HCCSCEEEEEET
T ss_pred CCCEEEECCCCCCccccchhhHHHHHHHHHhCCCEEEEeCCCCCCCcHHHHHHHHHHHHHHHHH----cCCCeEEEEEEC
Confidence 446999999988754 377788888 667999999999998652 34455555555554 556699999999
Q ss_pred hhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 251 FGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 251 ~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
|||.++..++.++|++|+++|.++++.
T Consensus 83 ~GG~~~r~~~~~~p~~v~~lv~i~tPh 109 (285)
T d1ex9a_ 83 HGGPTIRYVAAVRPDLIASATSVGAPH 109 (285)
T ss_dssp THHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred ccHHHHHHHHHHCCccceeEEEECCCC
Confidence 999999999999999999999998753
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.14 E-value=1.9e-10 Score=108.91 Aligned_cols=84 Identities=24% Similarity=0.230 Sum_probs=62.7
Q ss_pred CCeEEEeCCCC---CchhhHHHhHhhh-c-CCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhc-----CCCCcEEEEE
Q 012190 179 SPTLLFLPGID---GLGLGLILHHKPL-G-KAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHAS-----SPEKPIYLVG 248 (468)
Q Consensus 179 ~p~lV~lHG~~---~s~~~~~~~~~~L-~-~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~-----~~~~~i~LvG 248 (468)
.|+||++||.+ ++...+..+...+ . .+|.|+.+|+|...+..+....+|+.+.+..+... ...++|+++|
T Consensus 78 ~Pvvv~iHGGG~~~g~~~~~~~~~~~la~~~G~~V~~vdYrl~pe~~~~~~~~d~~~~~~~~~~~~~~~g~D~~rI~l~G 157 (317)
T d1lzla_ 78 VPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAPETTFPGPVNDCYAALLYIHAHAEELGIDPSRIAVGG 157 (317)
T ss_dssp EEEEEEECCSTTTSCCGGGGHHHHHHHHHHHCCEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEE
T ss_pred CcEEEEecCcccccccccccchHHHhHHhhcCCccccccccccccccccccccccccchhHHHHHHHHhCCCHHHEEEEE
Confidence 57899999964 4555666666666 3 48999999999988887777666666666554321 1135799999
Q ss_pred eChhHHHHHHHHHh
Q 012190 249 DSFGGCLALAVAAR 262 (468)
Q Consensus 249 hS~GG~ia~~~a~~ 262 (468)
+|.||.+++.++.+
T Consensus 158 ~SaGg~la~~~~~~ 171 (317)
T d1lzla_ 158 QSAGGGLAAGTVLK 171 (317)
T ss_dssp ETHHHHHHHHHHHH
T ss_pred eccccHHHHHHHhh
Confidence 99999999988865
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Probab=99.10 E-value=2.6e-10 Score=109.32 Aligned_cols=123 Identities=11% Similarity=-0.062 Sum_probs=85.8
Q ss_pred ccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchh----hHHHhHhhh-cCCeEEEEecCCCCCCCC-----hHHHH
Q 012190 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGL----GLILHHKPL-GKAFEVRCLHIPVYDRTP-----FEGLV 225 (468)
Q Consensus 156 ~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~----~~~~~~~~L-~~~~~V~~~D~~G~G~Ss-----~~~~~ 225 (468)
++..||..+.--.|.+.+. ..-|+||+.||++.... .+....+.| .+||.|+++|.||.|.|+ .....
T Consensus 10 ipmrDGv~L~~~vy~P~~~--~~~P~il~~~pyg~~~~~~~~~~~~~~~~~a~~GY~vv~~d~RG~g~S~G~~~~~~~~~ 87 (347)
T d1ju3a2 10 VPMRDGVRLAVDLYRPDAD--GPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGEFVPHVDDE 87 (347)
T ss_dssp EECTTSCEEEEEEEEECCS--SCEEEEEEEESSCTTCCHHHHTTSCCTHHHHHTTCEEEEEECTTSTTCCSCCCTTTTHH
T ss_pred EECCCCCEEEEEEEEcCCC--CCEEEEEEEcCCCCccccCcCcccHHHHHHHHCCCEEEEEeeCCccccCCccccccchh
Confidence 4567888765555555543 24688999999876322 222344556 789999999999999994 12222
Q ss_pred HHHHHHHHHHhhc-CCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCC
Q 012190 226 KFVEETVRREHAS-SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFG 280 (468)
Q Consensus 226 ~dl~~~i~~~~~~-~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~ 280 (468)
.|..++++.+... ..+.+|.++|+|+||.+++.+|+..|..+++++...+.....
T Consensus 88 ~d~~d~i~w~~~q~~~~grVg~~G~SygG~~~~~~A~~~~~~l~aiv~~~~~~d~~ 143 (347)
T d1ju3a2 88 ADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADLY 143 (347)
T ss_dssp HHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCTC
T ss_pred hhHHHHHHHHHhhccCCcceEeeeccccccchhhhhhcccccceeeeeccccchhh
Confidence 3334444433322 224589999999999999999999999999999998876543
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.09 E-value=1e-09 Score=100.92 Aligned_cols=123 Identities=14% Similarity=0.044 Sum_probs=71.4
Q ss_pred ccCCCCCCceeeeecCCC-CCCCCCCeEEEeCCCCCchhh--H-HHhHhhh-cCCeEEEEecCCCCCCC-----------
Q 012190 156 IIKPDGGPPRWFCPVDCG-RPLKGSPTLLFLPGIDGLGLG--L-ILHHKPL-GKAFEVRCLHIPVYDRT----------- 219 (468)
Q Consensus 156 ~~~~dg~~~~~~~y~~~g-~~~~~~p~lV~lHG~~~s~~~--~-~~~~~~L-~~~~~V~~~D~~G~G~S----------- 219 (468)
+...||......-+.+.+ .+.++.|+||++||.++.... + ......+ ..++-+...+.++....
T Consensus 12 ~~s~DG~~i~~~l~~P~~~~~~~~~P~iv~~HGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (280)
T d1qfma2 12 YPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILA 91 (280)
T ss_dssp EECTTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTTHHHHHHTTSGG
T ss_pred EECCCCCEEEEEEEEcCCCCCCCCeEEEEEECCCCcccCCCCcchhhhhhhcccceeeeccccccccccchhhhhccccc
Confidence 456788764333344443 233457999999996543321 1 1122222 33566666666655432
Q ss_pred ChHHHHHHHHHHHHHHh--hcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCC
Q 012190 220 PFEGLVKFVEETVRREH--ASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (468)
Q Consensus 220 s~~~~~~dl~~~i~~~~--~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~ 278 (468)
......++......... .......+.++|+|.||..+...+...++.+.+++...+...
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gg~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (280)
T d1qfma2 92 NKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMD 152 (280)
T ss_dssp GTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCC
T ss_pred ccccccchhhhhhhhhhhhcccccccccccccccccchhhhhhhcccchhhheeeeccccc
Confidence 12222223222222211 122355788999999999999999999998888888877553
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=99.08 E-value=3.7e-10 Score=108.83 Aligned_cols=124 Identities=19% Similarity=0.032 Sum_probs=83.3
Q ss_pred CccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCC---ch--hhHHHhHhhh-cCCeEEEEecCCCC----CCCChHHH
Q 012190 155 EIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDG---LG--LGLILHHKPL-GKAFEVRCLHIPVY----DRTPFEGL 224 (468)
Q Consensus 155 ~~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~---s~--~~~~~~~~~L-~~~~~V~~~D~~G~----G~Ss~~~~ 224 (468)
.+...||...+...|.+.+. ....|+||++||.|. +. ..+...+..+ ..++.|+.+|+|.. .+..+...
T Consensus 83 ~i~~~dg~~i~~~iy~P~~~-~~~~Pviv~~HGGG~~~gs~~~~~~~~~~~~la~~g~~VvsvdYRla~~~~pe~~~p~~ 161 (358)
T d1jkma_ 83 TILGVDGNEITLHVFRPAGV-EGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAEGHHPFPSG 161 (358)
T ss_dssp EEECTTSCEEEEEEEEETTC-CSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETTEECCTTHH
T ss_pred EEeCCCCCEEEEEEEecCCC-CCCCCeEEEecCCeeeeccccccccchHHHHHHhhhheeeeeeecccccccccCCCchh
Confidence 34456776655555555543 124579999999743 22 2455666666 67899999999987 33456666
Q ss_pred HHHHHHHHHHHhh---cCCCCcEEEEEeChhHHHHHHHHHh-----CCCCceEEEEeCCCCCC
Q 012190 225 VKFVEETVRREHA---SSPEKPIYLVGDSFGGCLALAVAAR-----NPTIDLILILSNPATSF 279 (468)
Q Consensus 225 ~~dl~~~i~~~~~---~~~~~~i~LvGhS~GG~ia~~~a~~-----~P~~v~~lVli~p~~~~ 279 (468)
.+|+.+.++.+.. ..+..+|+|+|+|.||.+|+.++.. .+..+.++++..|....
T Consensus 162 l~D~~~a~~wl~~~~~~~~~~ri~i~G~SAGG~La~~~a~~~~~~~~~~~~~~~~~~~p~~~~ 224 (358)
T d1jkma_ 162 VEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISG 224 (358)
T ss_dssp HHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCC
T ss_pred hHHHHHHHHHHHHhccccCCccceeecccCchHHHHHHHHHHhhcCCCccccccccccceecc
Confidence 6666666655432 2334689999999999998877644 23467889998886643
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Probab=99.08 E-value=1.3e-09 Score=99.49 Aligned_cols=118 Identities=14% Similarity=0.039 Sum_probs=69.9
Q ss_pred CCCCceeeeecCCC-CCCCCCCeEEEeCCCCCchhhHHH-------hHhhh-----cCCeEEEEecCCCCCCC--C----
Q 012190 160 DGGPPRWFCPVDCG-RPLKGSPTLLFLPGIDGLGLGLIL-------HHKPL-----GKAFEVRCLHIPVYDRT--P---- 220 (468)
Q Consensus 160 dg~~~~~~~y~~~g-~~~~~~p~lV~lHG~~~s~~~~~~-------~~~~L-----~~~~~V~~~D~~G~G~S--s---- 220 (468)
+|......-|.+.+ ++.+.-|+|+++||.+++...|.. ....+ ...+.+...+....... .
T Consensus 32 ~g~~~~~~v~lP~~y~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (255)
T d1jjfa_ 32 TNSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAAGPGIADGYEN 111 (255)
T ss_dssp TTEEEEEEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCCCCTTCSCHHHH
T ss_pred CCCEEEEEEEeCCCCCCCCCCcEEEEEecCCCChHHhhhhhHHHHHHHHHHHhhccCCcceeeecccccccccccccccc
Confidence 34444444455544 333456899999999887764421 11111 11233333332221111 1
Q ss_pred -hHHHHHHHHHHHHHHhhc-CCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 221 -FEGLVKFVEETVRREHAS-SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 221 -~~~~~~dl~~~i~~~~~~-~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
.+.+++++...++..... ....+++++|+|+||..++.+|.++|+++.+++.+++..
T Consensus 112 ~~~~~~~~li~~i~~~~~~~~d~~~i~i~G~S~GG~~a~~~a~~~Pd~F~~v~~~sg~~ 170 (255)
T d1jjfa_ 112 FTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAP 170 (255)
T ss_dssp HHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCT
T ss_pred hHHHHHHHHHHHHHHhhccccccceeEeeeccchhHHHHHHHHhCCCcccEEEEEccCc
Confidence 334455555555443221 224579999999999999999999999999999988754
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=99.01 E-value=1.1e-09 Score=106.28 Aligned_cols=123 Identities=12% Similarity=0.053 Sum_probs=89.2
Q ss_pred CccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchh-----------hHHHhHhhh-cCCeEEEEecCCCCCCCC--
Q 012190 155 EIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGL-----------GLILHHKPL-GKAFEVRCLHIPVYDRTP-- 220 (468)
Q Consensus 155 ~~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~-----------~~~~~~~~L-~~~~~V~~~D~~G~G~Ss-- 220 (468)
.+...||..+...-|.+.+. ..-|+||+.|+++.+.. .+....+.| .+||.|+.+|.||+|.|+
T Consensus 28 ~i~~rDG~~L~~~v~~P~~~--~~~P~il~~~pYg~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~g~S~G~ 105 (381)
T d1mpxa2 28 MIPMRDGVKLHTVIVLPKGA--KNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEGD 105 (381)
T ss_dssp EEECTTSCEEEEEEEEETTC--CSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCSC
T ss_pred EEECCCCCEEEEEEEEeCCC--CCccEEEEEccCCCCCcccccccccccccchhHHHHHHhCCCEEEEEecCccCCCCCc
Confidence 45677888766555555554 24688999998865433 112234556 789999999999999983
Q ss_pred h--------------HHHHHHHHHHHHHHhhcC--CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCC
Q 012190 221 F--------------EGLVKFVEETVRREHASS--PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSF 279 (468)
Q Consensus 221 ~--------------~~~~~dl~~~i~~~~~~~--~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~ 279 (468)
+ .+.++|..++++.+.... ...+|.++|+|+||.+++.+|+..|+.++++|..++....
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~D~~~~i~w~~~~~~~~~~~vg~~G~SygG~~~~~~a~~~~~~l~a~v~~~~~~d~ 180 (381)
T d1mpxa2 106 YVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMIDG 180 (381)
T ss_dssp CCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESCCCCT
T ss_pred eeccchhhhhcccchhHHHHHHHHHHHHHhhcCCcCccceeeecccHHHHHHHHHHhccccccceeeeecccccc
Confidence 1 234567777776654332 3458999999999999999999999999999999887643
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.97 E-value=1.8e-09 Score=98.85 Aligned_cols=95 Identities=22% Similarity=0.181 Sum_probs=70.7
Q ss_pred eEEEeCCCCCch---hhHHHhHhhhc---CCeEEEEecCCCCCCC--------ChHHHHHHHHHHHHHHhhcCCCCcEEE
Q 012190 181 TLLFLPGIDGLG---LGLILHHKPLG---KAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSPEKPIYL 246 (468)
Q Consensus 181 ~lV~lHG~~~s~---~~~~~~~~~L~---~~~~V~~~D~~G~G~S--------s~~~~~~dl~~~i~~~~~~~~~~~i~L 246 (468)
|||++||++++. ..|..+.+.|. .++.|+++++.....+ .+++.++.+.+.++... ...+++.+
T Consensus 7 PVVLvHGlg~s~~~~~~m~~l~~~l~~~~pG~~V~~l~~g~~~~~~~~~~~~~~~~~~~e~v~~~I~~~~--~~~~~v~l 84 (279)
T d1ei9a_ 7 PLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEIGKTLREDVENSFFLNVNSQVTTVCQILAKDP--KLQQGYNA 84 (279)
T ss_dssp CEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCCSSSHHHHHHHHHHSCHHHHHHHHHHHHHSCG--GGTTCEEE
T ss_pred cEEEECCCCCCCCChHHHHHHHHHHHHHCCCeEEEEEEcCCCcccccccchhhhHHHHHHHHHHHHHhcc--ccccceeE
Confidence 799999998753 35666666663 3789999998665433 35566666666665422 12458999
Q ss_pred EEeChhHHHHHHHHHhCCC-CceEEEEeCCCC
Q 012190 247 VGDSFGGCLALAVAARNPT-IDLILILSNPAT 277 (468)
Q Consensus 247 vGhS~GG~ia~~~a~~~P~-~v~~lVli~p~~ 277 (468)
|||||||.++-.++.+.+. .|..+|.++++.
T Consensus 85 VGhSqGGLiaR~~i~~~~~~~V~~lITLgsPH 116 (279)
T d1ei9a_ 85 MGFSQGGQFLRAVAQRCPSPPMVNLISVGGQH 116 (279)
T ss_dssp EEETTHHHHHHHHHHHCCSSCEEEEEEESCCT
T ss_pred EEEccccHHHHHHHHHcCCCCcceEEEECCCC
Confidence 9999999999999999875 589999998754
|
| >d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=98.96 E-value=2.7e-09 Score=100.15 Aligned_cols=102 Identities=19% Similarity=0.139 Sum_probs=73.4
Q ss_pred CCCeEEEeCCCC---CchhhHHHhHhhh-cC-CeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhcCC-----CCcEEEE
Q 012190 178 GSPTLLFLPGID---GLGLGLILHHKPL-GK-AFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSP-----EKPIYLV 247 (468)
Q Consensus 178 ~~p~lV~lHG~~---~s~~~~~~~~~~L-~~-~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~-----~~~i~Lv 247 (468)
+.|+||++||.+ ++...+..+...+ .+ ++.|+.+|+|......+....+|+...++.+..... ..+|+++
T Consensus 71 ~~Pvvv~iHGGg~~~g~~~~~~~~~~~~a~~~~~~v~~v~Yrl~p~~~~p~~~~D~~~~~~~l~~~~~~~~~d~~ri~~~ 150 (308)
T d1u4na_ 71 PYPALVYYHGGGWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEHKFPAAVEDAYDALQWIAERAADFHLDPARIAVG 150 (308)
T ss_dssp SEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCTTHHHHHHHHHHHHHHTTTGGGTEEEEEEEEE
T ss_pred CCCEEEEEecCeeeeeccccccchhhhhhhcccccccccccccccccccccccchhhhhhhHHHHhHHhcCCCcceEEEe
Confidence 468999999964 4445566666666 33 467889999988888877777777777776654321 3479999
Q ss_pred EeChhHHHHHHHHHhCC----CCceEEEEeCCCCCC
Q 012190 248 GDSFGGCLALAVAARNP----TIDLILILSNPATSF 279 (468)
Q Consensus 248 GhS~GG~ia~~~a~~~P----~~v~~lVli~p~~~~ 279 (468)
|+|.||.+++.++.... ..+.+..++.+....
T Consensus 151 G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (308)
T d1u4na_ 151 GDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGY 186 (308)
T ss_dssp EETHHHHHHHHHHHHHHHHTCCCCCCEEEESCCCCC
T ss_pred eccccchhHHHHHHhhhhccCCCccccccccccccc
Confidence 99999999988776532 345667777776543
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.96 E-value=2.9e-09 Score=100.28 Aligned_cols=102 Identities=21% Similarity=0.173 Sum_probs=73.4
Q ss_pred CCCeEEEeCCCC---CchhhHHHhHhhh-c-CCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhc-----CCCCcEEEE
Q 012190 178 GSPTLLFLPGID---GLGLGLILHHKPL-G-KAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHAS-----SPEKPIYLV 247 (468)
Q Consensus 178 ~~p~lV~lHG~~---~s~~~~~~~~~~L-~-~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~-----~~~~~i~Lv 247 (468)
+.|+||++||.+ ++...+..++..+ . .++.|+.+|+|...+..+....+|....++.+... ....+|+++
T Consensus 78 ~~P~il~iHGGg~~~g~~~~~~~~~~~l~~~~g~~Vv~v~Yrlap~~~~p~~~~d~~~a~~~~~~~~~~~~~d~~ri~v~ 157 (311)
T d1jjia_ 78 DSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPEHKFPAAVYDCYDATKWVAENAEELRIDPSKIFVG 157 (311)
T ss_dssp SEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTSEEEEEECCCTTTSCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEE
T ss_pred CceEEEEEcCCCCccCChhhhhhhhhhhhhcCCcEEEEeccccccccccchhhhhhhhhhhHHHHhHHHhCcChhHEEEE
Confidence 368999999974 4455556666666 3 48999999999887777766666666666554432 113579999
Q ss_pred EeChhHHHHHHHHHh----CCCCceEEEEeCCCCCC
Q 012190 248 GDSFGGCLALAVAAR----NPTIDLILILSNPATSF 279 (468)
Q Consensus 248 GhS~GG~ia~~~a~~----~P~~v~~lVli~p~~~~ 279 (468)
|+|.||.+++.++.. ......+.+++.|....
T Consensus 158 G~SaGG~la~~~~~~~~~~~~~~~~~~~l~~p~~~~ 193 (311)
T d1jjia_ 158 GDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNF 193 (311)
T ss_dssp EETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCS
T ss_pred eeecCCcceeechhhhhhccccccceeeeecceeee
Confidence 999999988776643 33467788899887644
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=98.80 E-value=3.3e-08 Score=96.51 Aligned_cols=79 Identities=9% Similarity=0.018 Sum_probs=63.7
Q ss_pred hhh-cCCeEEEEecCCCCCCCC-----h-HHHHHHHHHHHHHHhhc----------------CCCCcEEEEEeChhHHHH
Q 012190 200 KPL-GKAFEVRCLHIPVYDRTP-----F-EGLVKFVEETVRREHAS----------------SPEKPIYLVGDSFGGCLA 256 (468)
Q Consensus 200 ~~L-~~~~~V~~~D~~G~G~Ss-----~-~~~~~dl~~~i~~~~~~----------------~~~~~i~LvGhS~GG~ia 256 (468)
+.| .+||.|+.+|.||.|.|+ + .+-.+|..++|+.+... -.+.+|.++|+|+||..+
T Consensus 130 ~~~~~~GYavv~~D~RG~g~S~G~~~~~~~~e~~D~~~~IeWl~~~~~~~~~~~~~~~~~q~WsnGkVGm~G~SY~G~~q 209 (405)
T d1lnsa3 130 DYFLTRGFASIYVAGVGTRSSDGFQTSGDYQQIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLGTMA 209 (405)
T ss_dssp HHHHTTTCEEEEECCTTSTTSCSCCCTTSHHHHHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHHHHHH
T ss_pred HHHHhCCCEEEEECCCCCCCCCCccccCChhhhhhHHHHHHHHHhcccccccccccccccccccCCeeEEEecCHHHHHH
Confidence 445 789999999999999994 1 34466777888876532 113479999999999999
Q ss_pred HHHHHhCCCCceEEEEeCCCCC
Q 012190 257 LAVAARNPTIDLILILSNPATS 278 (468)
Q Consensus 257 ~~~a~~~P~~v~~lVli~p~~~ 278 (468)
+.+|+..|..++++|..++...
T Consensus 210 ~~aA~~~pp~LkAivp~~~~~d 231 (405)
T d1lnsa3 210 YGAATTGVEGLELILAEAGISS 231 (405)
T ss_dssp HHHHTTTCTTEEEEEEESCCSB
T ss_pred HHHHhcCCccceEEEecCcccc
Confidence 9999999999999999988764
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Probab=98.80 E-value=2.8e-09 Score=96.76 Aligned_cols=110 Identities=12% Similarity=-0.012 Sum_probs=62.5
Q ss_pred eecCCCCCCCCCCeEEEeCCCCCchh-hHHHhHhhh-cCC----eEEEEecCCCCCC-------C-C-hHHHHHHHHHHH
Q 012190 168 CPVDCGRPLKGSPTLLFLPGIDGLGL-GLILHHKPL-GKA----FEVRCLHIPVYDR-------T-P-FEGLVKFVEETV 232 (468)
Q Consensus 168 ~y~~~g~~~~~~p~lV~lHG~~~s~~-~~~~~~~~L-~~~----~~V~~~D~~G~G~-------S-s-~~~~~~dl~~~i 232 (468)
-|.+.+.+.+.-|+||++||.+.... .....+..+ ..+ +-++.++....+. . . .+.+.+++..++
T Consensus 33 v~~P~~~~~~~~Pvvv~lhG~~~~~~~~~~~~l~~l~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~v 112 (246)
T d3c8da2 33 IFTTGDVTAEERPLAVLLDGEFWAQSMPVWPVLTSLTHRQQLPPAVYVLIDAIDTTHRAHELPCNADFWLAVQQELLPLV 112 (246)
T ss_dssp EEEC-----CCCCEEEESSHHHHHHTSCCHHHHHHHHHTTSSCSCEEEEECCCSHHHHHHHSSSCHHHHHHHHHTHHHHH
T ss_pred EEECCCCCCCCCCEEEEeCCcchhccCcHHHHHHHHHHhCCCCceEEeecccccccccccccCccHHHHHHHHHHhhhHH
Confidence 34444433345789999999432211 112223333 332 3333343221110 0 1 233345555555
Q ss_pred HHHhhc-CCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 233 RREHAS-SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 233 ~~~~~~-~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
+....- ...+++.++|+||||..|+.++.++|+.+.+++.++|..
T Consensus 113 ~~~~~~~~d~~~~~i~G~S~GG~~al~~~~~~P~~F~a~~~~sg~~ 158 (246)
T d3c8da2 113 KVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSY 158 (246)
T ss_dssp HHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCT
T ss_pred HHhcccccCccceEEEecCchhHHHhhhhccCCchhcEEEcCCccc
Confidence 553321 223578999999999999999999999999999999865
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.71 E-value=3e-07 Score=84.95 Aligned_cols=101 Identities=16% Similarity=0.044 Sum_probs=71.5
Q ss_pred CCCeEEEeCCCCCch--hhHHH---hHhhh-cCCeEEEEecCCCCCCC----------------ChH-HHHHHHHHHHHH
Q 012190 178 GSPTLLFLPGIDGLG--LGLIL---HHKPL-GKAFEVRCLHIPVYDRT----------------PFE-GLVKFVEETVRR 234 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~--~~~~~---~~~~L-~~~~~V~~~D~~G~G~S----------------s~~-~~~~dl~~~i~~ 234 (468)
..|+|+++||.+++. ..|.. ..+.+ ..++.+++++..+.+.. .++ .+++++...++.
T Consensus 33 ~~Pvl~llhG~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~i~~ 112 (288)
T d1sfra_ 33 NSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFYSDWYQPACGKAGCQTYKWETFLTSELPGWLQA 112 (288)
T ss_dssp TBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTCTTCBCSSCEEETTEEECCBHHHHHHTHHHHHHHH
T ss_pred CceEEEEcCCCCCCCcchhhhhhccHHHHHHhCCCEEEEeccCCCCCCccccCcccccccccchhHHHHHHHHhHHHHHH
Confidence 489999999988653 34433 23444 45688888887665432 122 345666666655
Q ss_pred HhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCC
Q 012190 235 EHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSF 279 (468)
Q Consensus 235 ~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~ 279 (468)
...- ...++.+.|+||||..|+.+|.++|+++.+++.+++....
T Consensus 113 ~~~~-d~~r~~i~G~S~GG~~A~~~a~~~pd~f~av~~~Sg~~~~ 156 (288)
T d1sfra_ 113 NRHV-KPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDP 156 (288)
T ss_dssp HHCB-CSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCT
T ss_pred hcCC-CCCceEEEEEccHHHHHHHHHHhccccccEEEEecCcccc
Confidence 4422 3457899999999999999999999999999999986643
|
| >d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Dog (Canis familiaris) [TaxId: 9615]
Probab=98.67 E-value=3.8e-08 Score=92.13 Aligned_cols=100 Identities=15% Similarity=0.117 Sum_probs=70.4
Q ss_pred CCCeEEEeCCCCCchhh--HHHhHhhh--cCCeEEEEecCCCCCCCC-------hHHHHHHHHHHHHHHhhc--CCCCcE
Q 012190 178 GSPTLLFLPGIDGLGLG--LILHHKPL--GKAFEVRCLHIPVYDRTP-------FEGLVKFVEETVRREHAS--SPEKPI 244 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~--~~~~~~~L--~~~~~V~~~D~~G~G~Ss-------~~~~~~dl~~~i~~~~~~--~~~~~i 244 (468)
++|++|++||+.++... +..+..++ ..+++|+++|+....... .....+.+..+|+.+... ...+++
T Consensus 69 ~~pt~iiiHGw~~~~~~~~~~~~~~a~l~~~d~NVI~VDW~~~a~~~Y~~a~~n~~~Vg~~ia~~i~~l~~~~g~~~~~v 148 (337)
T d1rp1a2 69 DKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKGSQTSYTQAANNVRVVGAQVAQMLSMLSANYSYSPSQV 148 (337)
T ss_dssp TSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGGE
T ss_pred CCCEEEEeCCCcCCCCcchHHHHHHHHHhcCCceEEEEeeccccCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhe
Confidence 58899999999877663 33444444 445999999996533222 344455666666544322 345799
Q ss_pred EEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCC
Q 012190 245 YLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (468)
Q Consensus 245 ~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~ 278 (468)
+|||||+||.+|-.+ .++..++.+++.++|+..
T Consensus 149 hlIGhSLGAhvAG~a-G~~~~~l~rItgLDPA~P 181 (337)
T d1rp1a2 149 QLIGHSLGAHVAGEA-GSRTPGLGRITGLDPVEA 181 (337)
T ss_dssp EEEEETHHHHHHHHH-HHTSTTCCEEEEESCCCT
T ss_pred EEEeecHHHhhhHHH-HHhhccccceeccCCCcc
Confidence 999999999999754 455568999999999774
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=98.65 E-value=1.8e-07 Score=90.43 Aligned_cols=123 Identities=11% Similarity=0.009 Sum_probs=88.1
Q ss_pred CccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchh------------hHHHhHhhh-cCCeEEEEecCCCCCCCC-
Q 012190 155 EIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGL------------GLILHHKPL-GKAFEVRCLHIPVYDRTP- 220 (468)
Q Consensus 155 ~~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~------------~~~~~~~~L-~~~~~V~~~D~~G~G~Ss- 220 (468)
.+...||..+..-.|.+.+. ..-|+||+.|+++..+. ........| .+||.|+.+|.||+|.|+
T Consensus 32 ~ipmrDG~~L~~~v~~P~~~--~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~g~S~G 109 (385)
T d2b9va2 32 MVPMRDGVKLYTVIVIPKNA--RNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKYGSQG 109 (385)
T ss_dssp EEECTTSCEEEEEEEEETTC--CSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCS
T ss_pred EEECCCCCEEEEEEEEcCCC--CceeEEEEEccCCCCCccccCCcccccccccchHHHHHHhCCcEEEEEcCCcccCCCC
Confidence 35677888866555665543 24678888887753221 122334556 789999999999999984
Q ss_pred -h--------------HHHHHHHHHHHHHHhhcC--CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCC
Q 012190 221 -F--------------EGLVKFVEETVRREHASS--PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSF 279 (468)
Q Consensus 221 -~--------------~~~~~dl~~~i~~~~~~~--~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~ 279 (468)
+ .+.++|..++++.+..+. ...+|.++|+|+||.+++.+|+..|+.+++++..++....
T Consensus 110 ~~~~~~~~~~~~~~~~~~e~~D~~~~i~w~~~q~~~~~g~vg~~G~SygG~~~~~~a~~~~~~l~a~~~~~~~~d~ 185 (385)
T d2b9va2 110 DYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMVDG 185 (385)
T ss_dssp CCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEECCCT
T ss_pred ceeeccccccccccchhhHHHHHHHHHHHHHhccCccccceeeccccHHHHHHHHHHhccCCcceEEEEecccccc
Confidence 1 124677777777765442 3458999999999999999999999999999988776543
|
| >d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.62 E-value=5.5e-08 Score=90.85 Aligned_cols=101 Identities=16% Similarity=0.095 Sum_probs=75.0
Q ss_pred CCCeEEEeCCCCCchhh--HHHhHhhh--cCCeEEEEecCCCCCCCC-------hHHHHHHHHHHHHHHhh--cCCCCcE
Q 012190 178 GSPTLLFLPGIDGLGLG--LILHHKPL--GKAFEVRCLHIPVYDRTP-------FEGLVKFVEETVRREHA--SSPEKPI 244 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~--~~~~~~~L--~~~~~V~~~D~~G~G~Ss-------~~~~~~dl~~~i~~~~~--~~~~~~i 244 (468)
+.|++|++||+.++... +..+..++ ...++|+++|+....... .....+.+..+|+.+.. ....+++
T Consensus 69 ~~pt~iiiHG~~~~~~~~~~~~~~~a~l~~~d~NVi~VDW~~~a~~~Y~~a~~n~~~Vg~~ia~~i~~l~~~~g~~~~~v 148 (338)
T d1bu8a2 69 DRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRGSRTEYTQASYNTRVVGAEIAFLVQVLSTEMGYSPENV 148 (338)
T ss_dssp TSEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGGE
T ss_pred CCceEEEeCcccCCCCcccHHHHHHHHHhcCCceEEEEechhhcccchHHHHHhHHHHHHHHHHHHHHHHHhcCCCccee
Confidence 58899999999877663 33444444 445999999996543332 45555666666665432 2446799
Q ss_pred EEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCC
Q 012190 245 YLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (468)
Q Consensus 245 ~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~ 278 (468)
+|||||+||.+|-.++.+.+.++.+++.++|+..
T Consensus 149 hlIGhSLGAhiaG~ag~~l~~kigrItgLDPA~P 182 (338)
T d1bu8a2 149 HLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAEP 182 (338)
T ss_dssp EEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred EEEeccHHHHHHHHHHHhhccccccccccccCcC
Confidence 9999999999999999888889999999999763
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Probab=98.53 E-value=2.8e-06 Score=77.12 Aligned_cols=110 Identities=11% Similarity=-0.031 Sum_probs=68.4
Q ss_pred eecCCC-CCCCCCCeEEEeCCCCCchhhHH-------HhHhh----h-cCCeEEEEecCCCCCCCC---hHHHHHHHHHH
Q 012190 168 CPVDCG-RPLKGSPTLLFLPGIDGLGLGLI-------LHHKP----L-GKAFEVRCLHIPVYDRTP---FEGLVKFVEET 231 (468)
Q Consensus 168 ~y~~~g-~~~~~~p~lV~lHG~~~s~~~~~-------~~~~~----L-~~~~~V~~~D~~G~G~Ss---~~~~~~dl~~~ 231 (468)
-|.+.+ ++.+.-|+|+++||.+++...+. ..... . ...+.|+.++..+.+... .....+.+...
T Consensus 43 vylP~~y~~~k~yPvl~~lhG~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (273)
T d1wb4a1 43 VYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGNCTAQNFYQEFRQNVIPF 122 (273)
T ss_dssp EEECTTCCTTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHHTSSCCEEEEECCSCSTTCCTTTHHHHHHHTHHHH
T ss_pred EEeCCCCCCCCCceEEEEEeCCCCCcchhhhhccchhHHHHhhhhhhccCCceeeccccCCCCCccccchhcccccccch
Confidence 344443 22334689999999987654321 11111 1 346888888876543332 22223333222
Q ss_pred HHHHh-----------hcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 232 VRREH-----------ASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 232 i~~~~-----------~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
++... ......++.+.|+||||..++.+|.++|+++.+++.+++..
T Consensus 123 ~~~~~~~~~~~~~~~~~~~d~~~~~i~G~S~GG~~a~~~a~~~pd~f~a~~~~sg~~ 179 (273)
T d1wb4a1 123 VESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDY 179 (273)
T ss_dssp HHHHSCCSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCC
T ss_pred hhhhhhhhhhhhhhhcccCCccceEEEeeCCcchhhhhhhhcCCCcceEEEEeCccc
Confidence 22211 01234579999999999999999999999999999998754
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.40 E-value=1.5e-06 Score=79.87 Aligned_cols=101 Identities=16% Similarity=0.026 Sum_probs=71.5
Q ss_pred CCCeEEEeCCCCCc--hhhHHH---hHhhh-cCCeEEEEecCCCCCC----------------CChH-HHHHHHHHHHHH
Q 012190 178 GSPTLLFLPGIDGL--GLGLIL---HHKPL-GKAFEVRCLHIPVYDR----------------TPFE-GLVKFVEETVRR 234 (468)
Q Consensus 178 ~~p~lV~lHG~~~s--~~~~~~---~~~~L-~~~~~V~~~D~~G~G~----------------Ss~~-~~~~dl~~~i~~ 234 (468)
+.|+|+|+||.++. ...|.. ..+.+ ..++-|+.+|-...+. -.++ .+++++...|+.
T Consensus 28 ~~p~lyllhG~~g~~d~~~W~~~~~~~~~~~~~~~ivV~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~i~~ 107 (280)
T d1dqza_ 28 GPHAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSSFYTDWYQPSQSNGQNYTYKWETFLTREMPAWLQA 107 (280)
T ss_dssp SSSEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTTCTTSBCSSSCTTTTCCSCCBHHHHHHTHHHHHHHH
T ss_pred CCCEEEECCCCCCCCccchhhhcchHHHHHHhCCcEEEEECCCCCCcCccccCCcccccCCcchhHHHHHHHHHHHHHHH
Confidence 36899999998763 345654 23344 5578899998422111 0233 346777777766
Q ss_pred HhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCC
Q 012190 235 EHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSF 279 (468)
Q Consensus 235 ~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~ 279 (468)
.... ..+++++.|+||||..|+.+|.++|+++.+++.+++....
T Consensus 108 ~~~~-d~~r~~i~G~SmGG~~Al~lA~~~Pd~F~av~s~SG~~~~ 151 (280)
T d1dqza_ 108 NKGV-SPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNP 151 (280)
T ss_dssp HHCC-CSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCT
T ss_pred hcCC-CCCceEEEEechHHHHHHHHHHhCcCceeEEEEecCccCc
Confidence 5432 3456889999999999999999999999999999986643
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.37 E-value=1.6e-06 Score=79.14 Aligned_cols=99 Identities=16% Similarity=0.071 Sum_probs=70.0
Q ss_pred CCeEEEeCCCCCc--hhhHHHh---Hhhh-cCCeEEEEecCCCC---------CCCChH-HHHHHHHHHHHHHhhcCCCC
Q 012190 179 SPTLLFLPGIDGL--GLGLILH---HKPL-GKAFEVRCLHIPVY---------DRTPFE-GLVKFVEETVRREHASSPEK 242 (468)
Q Consensus 179 ~p~lV~lHG~~~s--~~~~~~~---~~~L-~~~~~V~~~D~~G~---------G~Ss~~-~~~~dl~~~i~~~~~~~~~~ 242 (468)
.|+|+++||.++. ...|... .+.. ..++-|+.+|--.. |...++ .+.+++...|+.... ...+
T Consensus 27 ~pvlylLhG~~g~~~~~~w~~~~~~~~~~~~~~~iVV~p~g~~~~~y~~~~~~~~~~~~tfl~~eL~~~i~~~~~-~d~~ 105 (267)
T d1r88a_ 27 PHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMYTNWEQDGSKQWDTFLSAELPDWLAANRG-LAPG 105 (267)
T ss_dssp SSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTTSTTSBCSSCTTCBHHHHHHTHHHHHHHHHSC-CCSS
T ss_pred CCEEEEcCCCCCCCCcchhhhccHHHHHHhhCCeEEEEECCCCCcCCccccccccccHHHHHHHHHHHHHHHhcC-CCCC
Confidence 5899999998664 3366653 2333 45688888874211 111244 345567777766432 2345
Q ss_pred cEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCC
Q 012190 243 PIYLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (468)
Q Consensus 243 ~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~ 278 (468)
++.+.|+||||..|+.+|.++|+++.+++.+++...
T Consensus 106 r~~i~G~SmGG~~Al~la~~~Pd~F~av~~~SG~~~ 141 (267)
T d1r88a_ 106 GHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLY 141 (267)
T ss_dssp CEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCC
T ss_pred ceEEEEEcchHHHHHHHHHhCcccccEEEEeCCccC
Confidence 789999999999999999999999999999998653
|
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.33 E-value=2.6e-05 Score=76.35 Aligned_cols=113 Identities=19% Similarity=0.131 Sum_probs=77.1
Q ss_pred eeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhh-----------h-------cCCeEEEEecCC-CCCCC-------
Q 012190 166 WFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKP-----------L-------GKAFEVRCLHIP-VYDRT------- 219 (468)
Q Consensus 166 ~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~-----------L-------~~~~~V~~~D~~-G~G~S------- 219 (468)
++.+.+......+.|+++.+.|.+|++..+..+.+. + .+..+++-+|.| |.|.|
T Consensus 35 ffw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~~~e~GP~~v~~~~~~~~~N~~SW~~~anllfIDqPvGtGfS~~~~~~~ 114 (452)
T d1ivya_ 35 HYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAGVGFSYSDDKFY 114 (452)
T ss_dssp EEEEECCSSCGGGSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCGGGSSEEEEECCSTTSTTCEESSCCC
T ss_pred EEEEEEcCCCCCCCCEEEEECCCCcHHHHHHHHHccCCcEEcCCCCeeccCCcchhcccCEEEEecCCCcccccCCCCCC
Confidence 333444433234689999999999998877543311 1 134688999986 89987
Q ss_pred --ChHHHHHHHHHHHHHHhhcC---CCCcEEEEEeChhHHHHHHHHHh----CCCCceEEEEeCCCCC
Q 012190 220 --PFEGLVKFVEETVRREHASS---PEKPIYLVGDSFGGCLALAVAAR----NPTIDLILILSNPATS 278 (468)
Q Consensus 220 --s~~~~~~dl~~~i~~~~~~~---~~~~i~LvGhS~GG~ia~~~a~~----~P~~v~~lVli~p~~~ 278 (468)
+.++.++|+.++++...... ..++++|.|.|+||..+-.+|.. .+-.++|+++.++...
T Consensus 115 ~~~~~~~a~d~~~~l~~f~~~fp~~~~~~~yi~GESYgG~y~P~ia~~i~~~~~i~l~Gi~igng~~d 182 (452)
T d1ivya_ 115 ATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGLSS 182 (452)
T ss_dssp CCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCCSB
T ss_pred CCCcHHHHHHHHHHHHHHHHhchhhcCCceEEeeccccchhhHHHHHHHHhcCcccccceEcCCCccC
Confidence 24455656555554444333 35699999999999998888754 3345899999998764
|
| >d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical esterase YJL068C domain: Hypothetical esterase YJL068C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.32 E-value=2.1e-06 Score=79.55 Aligned_cols=101 Identities=13% Similarity=0.105 Sum_probs=67.2
Q ss_pred CCCeEEEeCCCCCchhhHHHh--Hhhh--cCCeEEEEecCC----------------CCCCC--------------Ch-H
Q 012190 178 GSPTLLFLPGIDGLGLGLILH--HKPL--GKAFEVRCLHIP----------------VYDRT--------------PF-E 222 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~--~~~L--~~~~~V~~~D~~----------------G~G~S--------------s~-~ 222 (468)
.-|+|+++||++++...|... +..+ ..+..|+..+.. |.+.+ .+ +
T Consensus 48 ~yPVLYlLhG~~~~~~~w~~~~~~~~~~~~~~~~vv~~~~~p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~ 127 (299)
T d1pv1a_ 48 RIPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYD 127 (299)
T ss_dssp TBCEEEEECCTTCCHHHHHHHSCHHHHHHHHTCEEEECCSSCCSTTSCCCTTCCSSSSSSCCTTCBCCSHHHHTTCBHHH
T ss_pred CCCEEEEcCCCCCCHHHHHHhhhHHHHHHHcCCceecCCCcccccccCCcccccccccCCCccccccccCCcccccchHH
Confidence 468999999999999888653 2222 235667766532 22222 12 2
Q ss_pred HHHHHHHHHHHHHhhcCCC------CcEEEEEeChhHHHHHHHHHh--CCCCceEEEEeCCCCC
Q 012190 223 GLVKFVEETVRREHASSPE------KPIYLVGDSFGGCLALAVAAR--NPTIDLILILSNPATS 278 (468)
Q Consensus 223 ~~~~dl~~~i~~~~~~~~~------~~i~LvGhS~GG~ia~~~a~~--~P~~v~~lVli~p~~~ 278 (468)
.+.+++...|+..-..... ....|.||||||.-|+.+|.+ +|++..+++..++...
T Consensus 128 ~i~~EL~p~i~~~~~~~~~r~~~~~~~~~I~G~SmGG~gAl~~al~~~~p~~f~~~~s~s~~~~ 191 (299)
T d1pv1a_ 128 YIHKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAICGYLKGYSGKRYKSCSAFAPIVN 191 (299)
T ss_dssp HHHTHHHHHHHHHHCC-----BCSSSSEEEEEETHHHHHHHHHHHHTGGGTCCSEEEEESCCCC
T ss_pred HHHHHHHHHHHHhCCcccccccccccceEEEeecccHHHHHHHHHHhcCCCceEEEeeccCcCC
Confidence 3456666666665422221 368899999999999999986 4899999999887653
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.32 E-value=2.6e-07 Score=88.34 Aligned_cols=98 Identities=11% Similarity=0.030 Sum_probs=72.3
Q ss_pred CCCeEEEeCCCCCchh-------hHHH----hHhhh-cCCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhcCC-----
Q 012190 178 GSPTLLFLPGIDGLGL-------GLIL----HHKPL-GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSP----- 240 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~-------~~~~----~~~~L-~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~----- 240 (468)
++-||||+||+.|-.. +|.. +.+.| ..+++|++...+.. ++.++-++.+...|+......+
T Consensus 6 ~~yPIVLvHGl~Gf~~~~l~~~~YW~G~~~~I~~~L~~~G~~V~~~~V~p~--~S~~~RA~eL~~~I~~~~~d~G~~hs~ 83 (388)
T d1ku0a_ 6 NDAPIVLLHGFTGWGREEMLGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPL--SSNWDRACEAYAQLVGGTVDYGAAHAA 83 (388)
T ss_dssp CCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEECCCCSS--BCHHHHHHHHHHHHHCEEEECCHHHHH
T ss_pred CCCCEEEeCCcccCCccccCcccccCCchhhhHHHHHhCCCEEEEeccCCc--cCHHHHHHHHHHHHhhhhhhhhHhHHh
Confidence 4567999999866532 4543 55667 77899999998754 4678888888888875433222
Q ss_pred --------------------CCcEEEEEeChhHHHHHHHHHhCC-------------------------CCceEEEEeCC
Q 012190 241 --------------------EKPIYLVGDSFGGCLALAVAARNP-------------------------TIDLILILSNP 275 (468)
Q Consensus 241 --------------------~~~i~LvGhS~GG~ia~~~a~~~P-------------------------~~v~~lVli~p 275 (468)
..||+||||||||..+-.+++..| ..|.+++-++.
T Consensus 84 ~~~~~~~~r~y~g~~~~~~~~~kVnLIgHS~GGld~Ryl~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~V~SvTTIsT 163 (388)
T d1ku0a_ 84 KHGHARFGRTYPGLLPELKRGGRVHIIAHSQGGQTARMLVSLLENGSQEEREYAKEHNVSLSPLFEGGHRFVLSVTTIAT 163 (388)
T ss_dssp HHTSCSEEEEECCSCGGGGGTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCEEEEEEESC
T ss_pred hhcccccCccCcccccccccCCceeEeecccccHHHHHHHHHhccccccccccccccccccccccccCCcceEEEEeccC
Confidence 259999999999999987776543 36999999987
Q ss_pred CC
Q 012190 276 AT 277 (468)
Q Consensus 276 ~~ 277 (468)
+.
T Consensus 164 PH 165 (388)
T d1ku0a_ 164 PH 165 (388)
T ss_dssp CT
T ss_pred CC
Confidence 54
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Probab=98.32 E-value=1.5e-06 Score=81.01 Aligned_cols=46 Identities=13% Similarity=0.156 Sum_probs=38.6
Q ss_pred CCceEEEEEeCCCCCCCcHHHHHHHHHhCC------CcEEEEeCCCCcccccc
Q 012190 378 VKAEVLVLASGKDNMLPSEDEAKRLNNSLQ------NCIVRNFKDNGHTLLLE 424 (468)
Q Consensus 378 i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~------~~~~~~i~~aGH~~~~e 424 (468)
.+.|++++||++|..|++. ..+.+.+.+. +.+++..+++||....+
T Consensus 89 ~~~pvll~hG~~D~~Vpp~-~s~~l~~~l~~~~~~~~v~yv~~~gagH~fpT~ 140 (318)
T d2d81a1 89 GQRKIYMWTGSSDTTVGPN-VMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTD 140 (318)
T ss_dssp GGCEEEEEEETTCCSSCHH-HHHHHHHHHTTTSCGGGEEEEEETTCCSSEEES
T ss_pred CCCCEEEEecCCCCCcCHH-HHHHHHHHHHcCcCCCceEEEEeCCCCCCCCCC
Confidence 4579999999999999999 7888888764 35778889999998765
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Probab=98.29 E-value=9e-07 Score=80.34 Aligned_cols=55 Identities=11% Similarity=0.119 Sum_probs=35.6
Q ss_pred cCCceEEEEEeCC--------CCCCCcHHHHHHHHHhC----CCcEEEEeCCCCccccccCcHHHHHHHH
Q 012190 377 AVKAEVLVLASGK--------DNMLPSEDEAKRLNNSL----QNCIVRNFKDNGHTLLLEEGISLLTIIK 434 (468)
Q Consensus 377 ~i~~PvLlI~G~~--------D~~v~~~~~~~~l~~~l----~~~~~~~i~~aGH~~~~e~p~~~~~~I~ 434 (468)
..+.|+++.+|+. |..++.. ..+.+.+.+ .++++.++||++|... -+..+.+.|+
T Consensus 194 ~~~~~~~~~~g~~~~~~~~~~d~~~~~~-~~~~l~~~L~~~g~~~~~~~~pG~~Hg~~--~~~s~~~~l~ 260 (265)
T d2gzsa1 194 FCTKHLAIMEGSATQGDNRETHAVGVLS-KIHTTLTILKDKGVNAVFWDFPNLGHGPM--FNASFRQALL 260 (265)
T ss_dssp TTTCEEEEEECCC-----------CHHH-HHHHHHHHHHHTTCCEEEEECTTCCHHHH--HHHHHHHHHH
T ss_pred cCCCcEEEEcCCcccccccccccchhHH-HHHHHHHHHHHCCCCEEEEEcCCCCcchH--HHHHHHHHHH
Confidence 4456778887766 5555565 566666655 3679999999999653 2555666665
|
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.14 E-value=0.0002 Score=69.15 Aligned_cols=102 Identities=18% Similarity=0.112 Sum_probs=73.2
Q ss_pred CCCCeEEEeCCCCCchhhHHHhHh-----------------hhcCCeEEEEecCC-CCCCC--------ChHHHHHHHHH
Q 012190 177 KGSPTLLFLPGIDGLGLGLILHHK-----------------PLGKAFEVRCLHIP-VYDRT--------PFEGLVKFVEE 230 (468)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~~~~~~-----------------~L~~~~~V~~~D~~-G~G~S--------s~~~~~~dl~~ 230 (468)
.+.|++|.+-|.+|++..+..+.+ .+.+..+++-+|.| |.|.| +-.+.++++.+
T Consensus 42 ~~~Pl~~WlnGGPG~SS~~g~~~e~GP~~i~~~~~~~~N~~sW~~~anllfiD~PvGtGfSy~~~~~~~~~~~~a~d~~~ 121 (421)
T d1wpxa1 42 AKDPVILWLNGGPGCSSLTGLFFELGPSSIGPDLKPIGNPYSWNSNATVIFLDQPVNVGFSYSGSSGVSNTVAAGKDVYN 121 (421)
T ss_dssp TTSCEEEEECCTTTBCTHHHHHHTTSSEEECTTSCEEECTTCGGGSSEEEEECCSTTSTTCBCSSCCCCSHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHhcCCcEECCCCccccCCcccccccCEEEEecCCCCCceecCCccccchHHHHHHHHH
Confidence 567999999999999887755442 11235789999965 88877 24555666666
Q ss_pred HHHHHhhcCC-----CCcEEEEEeChhHHHHHHHHHhC------CCCceEEEEeCCCCC
Q 012190 231 TVRREHASSP-----EKPIYLVGDSFGGCLALAVAARN------PTIDLILILSNPATS 278 (468)
Q Consensus 231 ~i~~~~~~~~-----~~~i~LvGhS~GG~ia~~~a~~~------P~~v~~lVli~p~~~ 278 (468)
+++......+ ..+++|.|.|+||..+-.+|.+- +-.++|+++.+|...
T Consensus 122 fl~~f~~~fp~~~~k~~~~yi~GESYgG~yvP~la~~i~~~~~~~inlkGi~iGng~~d 180 (421)
T d1wpxa1 122 FLELFFDQFPEYVNKGQDFHIAGESYAGHYIPVFASEILSHKDRNFNLTSVLIGNGLTD 180 (421)
T ss_dssp HHHHHHHHCTHHHHTCCCEEEEEETTHHHHHHHHHHHHHHCSSCSSCCCEEEEESCCCC
T ss_pred HHHHHHHhChhhhccCCCcEEeeecccccccHHHHHHHHHccCCCcceeeeEecCCccc
Confidence 6665554443 35899999999999988777541 235779999998764
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=97.93 E-value=0.00017 Score=71.07 Aligned_cols=101 Identities=17% Similarity=0.104 Sum_probs=71.1
Q ss_pred CCCeEEEeCCCCCchhhHHHhHh---h-------h-------cCCeEEEEecCC-CCCCC-----------------ChH
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHK---P-------L-------GKAFEVRCLHIP-VYDRT-----------------PFE 222 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~---~-------L-------~~~~~V~~~D~~-G~G~S-----------------s~~ 222 (468)
+.|++|.+.|.+|++..+..+.+ . | .+..+++-+|.| |-|.| +.+
T Consensus 66 ~~Pl~lWlnGGPGcSS~~g~f~E~GP~~v~~~~~l~~Np~SWn~~an~lfIDqPvGvGfSy~~~~~~~~~~~~~~~~~~~ 145 (483)
T d1ac5a_ 66 DRPLIIWLNGGPGCSSMDGALVESGPFRVNSDGKLYLNEGSWISKGDLLFIDQPTGTGFSVEQNKDEGKIDKNKFDEDLE 145 (483)
T ss_dssp SCCEEEEECCTTTBCTHHHHHHSSSSEEECTTSCEEECTTCGGGTSEEEEECCSTTSTTCSSCCSSGGGSCTTSSCCSHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHccCCeEECCCCceeeCCCcccccCCEEEEeCCCCcCeeecCCCCccccccccccCCHH
Confidence 45999999999999886644331 0 1 135789999976 78877 235
Q ss_pred HHHHHHHHHHHHHhhcCC---CCcEEEEEeChhHHHHHHHHHhC------------CCCceEEEEeCCCCC
Q 012190 223 GLVKFVEETVRREHASSP---EKPIYLVGDSFGGCLALAVAARN------------PTIDLILILSNPATS 278 (468)
Q Consensus 223 ~~~~dl~~~i~~~~~~~~---~~~i~LvGhS~GG~ia~~~a~~~------------P~~v~~lVli~p~~~ 278 (468)
+.++++..+++......+ ..+++|.|.|+||..+-.+|..- +-.++++++.++...
T Consensus 146 ~~a~~~~~fl~~f~~~fp~~~~~~~yI~GESYgG~YvP~la~~i~~~n~~~~~~~~~inLkGi~IGNg~~d 216 (483)
T d1ac5a_ 146 DVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDLKALLIGNGWID 216 (483)
T ss_dssp HHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHhCcccccCCeEEeecccccchHHHHHHHHHHhccccccCCCcccceeeeecCCccC
Confidence 567777777665543333 56899999999999888777542 125889998888763
|
| >d1uwca_ c.69.1.17 (A:) Feruloyl esterase A {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Feruloyl esterase A species: Aspergillus niger [TaxId: 5061]
Probab=96.16 E-value=0.0062 Score=54.11 Aligned_cols=42 Identities=24% Similarity=0.414 Sum_probs=32.6
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHh
Q 012190 221 FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR 262 (468)
Q Consensus 221 ~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~ 262 (468)
+..+.+.+...++.+....+..++++.|||+||++|..+|..
T Consensus 104 ~~~i~~~i~~~i~~~~~~~~~~~i~vTGHSLGGAlA~L~a~~ 145 (261)
T d1uwca_ 104 WISVQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQ 145 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCcceEEeccchhHHHHHHHHHH
Confidence 445556666667666666788899999999999999987754
|
| >d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus [TaxId: 4844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizopus niveus [TaxId: 4844]
Probab=96.05 E-value=0.0038 Score=55.70 Aligned_cols=42 Identities=24% Similarity=0.377 Sum_probs=32.0
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHh
Q 012190 221 FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR 262 (468)
Q Consensus 221 ~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~ 262 (468)
+..+.+.+...++.+....+..++++.|||+||++|..+|..
T Consensus 112 ~~~~~~~i~~~v~~~~~~~~~~~i~vtGHSLGGAlA~L~a~~ 153 (265)
T d1lgya_ 112 YEQVVNDYFPVVQEQLTAHPTYKVIVTGHSLGGAQALLAGMD 153 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCceEEEEecccchHHHHHHHHH
Confidence 455556666666666556778899999999999999887754
|
| >d3tgla_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizomucor miehei [TaxId: 4839]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizomucor miehei [TaxId: 4839]
Probab=95.93 E-value=0.0046 Score=55.21 Aligned_cols=42 Identities=21% Similarity=0.309 Sum_probs=31.5
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHh
Q 012190 221 FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR 262 (468)
Q Consensus 221 ~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~ 262 (468)
+..+.+.+...++....+.+..++++.|||+||++|..+|..
T Consensus 111 ~~~v~~~i~~~i~~~~~~~~~~~i~vtGHSLGGAlA~L~a~~ 152 (265)
T d3tgla_ 111 YGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGATVLLCALD 152 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCceEEEecccchHHHHHHHHHH
Confidence 455555556666655556778899999999999999987754
|
| >d1tiaa_ c.69.1.17 (A:) Triacylglycerol lipase {Penicillium camembertii [TaxId: 5075]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Penicillium camembertii [TaxId: 5075]
Probab=95.90 E-value=0.0039 Score=55.80 Aligned_cols=42 Identities=19% Similarity=0.305 Sum_probs=32.4
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHh
Q 012190 221 FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR 262 (468)
Q Consensus 221 ~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~ 262 (468)
+..+.+++...++.+....+..++++.|||+||++|..+|..
T Consensus 116 ~~~~~~~i~~~i~~~~~~~~~~~i~iTGHSLGGAlA~L~a~~ 157 (271)
T d1tiaa_ 116 WKLVRDDIIKELKEVVAQNPNYELVVVGHSLGAAVATLAATD 157 (271)
T ss_pred HHHHHHHHHHHHHHHHHhCCCceEEEeccchHHHHHHHHHHH
Confidence 455556666666666666778899999999999999988765
|
| >d1tiba_ c.69.1.17 (A:) Triacylglycerol lipase {Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]
Probab=95.90 E-value=0.0048 Score=55.19 Aligned_cols=42 Identities=21% Similarity=0.427 Sum_probs=32.9
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHh
Q 012190 221 FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR 262 (468)
Q Consensus 221 ~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~ 262 (468)
+....+.+...++....+.+..++++.|||+||++|..+|..
T Consensus 117 ~~~~~~~v~~~v~~~~~~~~~~~i~vtGHSLGGalA~l~a~~ 158 (269)
T d1tiba_ 117 WRSVADTLRQKVEDAVREHPDYRVVFTGHSLGGALATVAGAD 158 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCcceeeeccchHHHHHHHHHHH
Confidence 455556666666666666778899999999999999988865
|
| >d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]
Probab=94.93 E-value=0.014 Score=57.78 Aligned_cols=100 Identities=10% Similarity=0.021 Sum_probs=56.6
Q ss_pred CCCCeEEEeCCCCCchh---hH--HHh-Hhhh--cCCeEEEEecCC----CCCCC-----------ChHHHHHHHHHHHH
Q 012190 177 KGSPTLLFLPGIDGLGL---GL--ILH-HKPL--GKAFEVRCLHIP----VYDRT-----------PFEGLVKFVEETVR 233 (468)
Q Consensus 177 ~~~p~lV~lHG~~~s~~---~~--~~~-~~~L--~~~~~V~~~D~~----G~G~S-----------s~~~~~~dl~~~i~ 233 (468)
++-|++|++||.+.... .+ ..+ ...+ ..+.-|+++.+| |+-.+ .+.|+...+.-+-+
T Consensus 120 ~~lPV~V~ihGG~f~~G~~~~~~~~~~~~~~~~~~~~vIvVt~nYRlg~~Gfl~~~~~~~~~~gN~Gl~Dq~~AL~WV~~ 199 (544)
T d1thga_ 120 AKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAEGNTNAGLHDQRKGLEWVSD 199 (544)
T ss_dssp CCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeccCCCccCCCccCCcchhhhhhhhccCCeEEEecccccccccccCCchhhccccccHHHHHhhhhhhhhhh
Confidence 35699999999763321 11 111 2223 456888889988 32221 12333322222222
Q ss_pred HHhhcCC--CCcEEEEEeChhHHHHHHHHHh--------CCCCceEEEEeCCCC
Q 012190 234 REHASSP--EKPIYLVGDSFGGCLALAVAAR--------NPTIDLILILSNPAT 277 (468)
Q Consensus 234 ~~~~~~~--~~~i~LvGhS~GG~ia~~~a~~--------~P~~v~~lVli~p~~ 277 (468)
.+. ..+ ..+|.|+|||.||..+...+.. ....+.++|+.++..
T Consensus 200 nI~-~FGGDp~~VTl~G~SaGa~~v~~~l~sp~~~~~~~s~gLF~raI~qSG~~ 252 (544)
T d1thga_ 200 NIA-NFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp HGG-GGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCC
T ss_pred hhc-ccccCCCceEeeeeccchHHHHHHHhCcCCCcccchhhhhcccccccccc
Confidence 221 222 3689999999998766544432 124789999988754
|
| >d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Candida cylindracea, cholesterol esterase [TaxId: 44322]
Probab=94.66 E-value=0.058 Score=52.86 Aligned_cols=101 Identities=14% Similarity=0.025 Sum_probs=56.4
Q ss_pred CCCCeEEEeCCCCC---chhhH--HHhH-hhh--cCCeEEEEecCC----CCCCC-------ChHHHHHHHHHHHHHHh-
Q 012190 177 KGSPTLLFLPGIDG---LGLGL--ILHH-KPL--GKAFEVRCLHIP----VYDRT-------PFEGLVKFVEETVRREH- 236 (468)
Q Consensus 177 ~~~p~lV~lHG~~~---s~~~~--~~~~-~~L--~~~~~V~~~D~~----G~G~S-------s~~~~~~dl~~~i~~~~- 236 (468)
++.|+||++||.+. ++..| ..+. ..+ .++.-|+++.+| |+-.. +-..-..|...+++.++
T Consensus 112 ~~~PVlv~ihGG~f~~g~~~~~~~~~~~~~~~~~~~~vIvVt~nYRLg~~GFl~~~~~~~~~~gN~Gl~Dq~~AL~WV~~ 191 (534)
T d1llfa_ 112 ANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGSGNAGLKDQRLGMQWVAD 191 (534)
T ss_dssp CCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCccccCCCCCCCchhccchhhhccCCeEEEEeecCCCcccccCCcccccccccccchhHHHHHHHHHHh
Confidence 46799999998763 22222 1222 222 567888899988 22211 10111223333332222
Q ss_pred --hcCC--CCcEEEEEeChhHHHHH-HHHHhC----C---CCceEEEEeCCCC
Q 012190 237 --ASSP--EKPIYLVGDSFGGCLAL-AVAARN----P---TIDLILILSNPAT 277 (468)
Q Consensus 237 --~~~~--~~~i~LvGhS~GG~ia~-~~a~~~----P---~~v~~lVli~p~~ 277 (468)
...+ ..+|.|+|||.||..+. +++... | ..++++|+.++..
T Consensus 192 nI~~FGGDp~~VTl~G~SaGa~~v~~~l~~~~~~~sp~s~gLF~raI~qSGs~ 244 (534)
T d1llfa_ 192 NIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAM 244 (534)
T ss_dssp HGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCCS
T ss_pred hhhhhccCCcceeeeeecchHHHHHHHHhccccccccchhhhhhhhhhccCcc
Confidence 1222 45899999999998554 444321 1 3589999988754
|
| >d1cexa_ c.69.1.30 (A:) Cutinase {Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Cutinase species: Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]
Probab=94.42 E-value=0.23 Score=41.47 Aligned_cols=73 Identities=11% Similarity=0.010 Sum_probs=49.8
Q ss_pred CCeEEEEecCCCC---------CCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCC----CCceEE
Q 012190 204 KAFEVRCLHIPVY---------DRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNP----TIDLIL 270 (468)
Q Consensus 204 ~~~~V~~~D~~G~---------G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P----~~v~~l 270 (468)
....+..++++-- +. +...=+..+...++....+.|+.+++|+|+|.|+.++-.++...+ ++|.++
T Consensus 50 ~~v~~~~v~~~y~a~~~~~~~~~~-s~~~G~~~~~~~i~~~a~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~av 128 (197)
T d1cexa_ 50 DGVWIQGVGGAYRATLGDNALPRG-TSSAAIREMLGLFQQANTKCPDATLIAGGYSQGAALAAASIEDLDSAIRDKIAGT 128 (197)
T ss_dssp TTEEEEECCTTCCCCGGGGGSTTS-SCHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHSCHHHHTTEEEE
T ss_pred CcceEeeecccccccccccccccc-chhHHHHHHHHHHHHHHhhCCCCeEEEeeeccccHhhhcccccCChhhhhhEEEE
Confidence 4566777765432 22 233344455555555555588999999999999999988887653 688999
Q ss_pred EEeCCCC
Q 012190 271 ILSNPAT 277 (468)
Q Consensus 271 Vli~p~~ 277 (468)
++++-+.
T Consensus 129 vlfGDP~ 135 (197)
T d1cexa_ 129 VLFGYTK 135 (197)
T ss_dssp EEESCTT
T ss_pred EEEeCCC
Confidence 9977543
|
| >d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Thermophilic para-nitrobenzyl esterase (PNB esterase) species: Bacillus subtilis [TaxId: 1423]
Probab=94.35 E-value=0.042 Score=53.10 Aligned_cols=100 Identities=14% Similarity=0.115 Sum_probs=58.9
Q ss_pred CCCCeEEEeCCCCCc---hhhHHHhHhhh--cCCeEEEEecCC----CC---CC--C--C----hHHHHHHHHHHHHHHh
Q 012190 177 KGSPTLLFLPGIDGL---GLGLILHHKPL--GKAFEVRCLHIP----VY---DR--T--P----FEGLVKFVEETVRREH 236 (468)
Q Consensus 177 ~~~p~lV~lHG~~~s---~~~~~~~~~~L--~~~~~V~~~D~~----G~---G~--S--s----~~~~~~dl~~~i~~~~ 236 (468)
++-|++|++||.+.. ...+......+ ..+.-|+++.+| |+ +. . + +.|....++-+-+.+.
T Consensus 94 ~~lPV~v~ihGG~~~~g~~~~~~~~~~~~~~~~~vVvV~~nYRlg~~GFl~~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~ 173 (483)
T d1qe3a_ 94 QNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLGLLDQAAALKWVRENIS 173 (483)
T ss_dssp CSEEEEEEECCSTTTSCCTTSGGGCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTCTTSCSCHHHHHHHHHHHHHHHHGG
T ss_pred CCCceEEEEeecccccCCccccccccccccccCceEEEeecccccchhhccccccccccccccccHHHHHHHHHHHHHHH
Confidence 357999999997433 22222222223 335788888887 33 11 1 1 3444333333222222
Q ss_pred hcCC--CCcEEEEEeChhHHHHHHHHHh--CCCCceEEEEeCCCC
Q 012190 237 ASSP--EKPIYLVGDSFGGCLALAVAAR--NPTIDLILILSNPAT 277 (468)
Q Consensus 237 ~~~~--~~~i~LvGhS~GG~ia~~~a~~--~P~~v~~lVli~p~~ 277 (468)
..+ ..+|.|+|||.||..+...+.. ....+.++|+.++..
T Consensus 174 -~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~ 217 (483)
T d1qe3a_ 174 -AFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGAS 217 (483)
T ss_dssp -GGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCC
T ss_pred -HcCCCcccceeeccccccchhhhhhcccccCCcceeeccccCCc
Confidence 222 4589999999999887766543 235899999998764
|
| >d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.31 E-value=0.04 Score=54.07 Aligned_cols=100 Identities=10% Similarity=0.016 Sum_probs=58.2
Q ss_pred CCCCeEEEeCCCCC---chhhHHHhHhhh--cCCeEEEEecCC----CC---C-C--CC----hHHHHHHHHHHHHHHhh
Q 012190 177 KGSPTLLFLPGIDG---LGLGLILHHKPL--GKAFEVRCLHIP----VY---D-R--TP----FEGLVKFVEETVRREHA 237 (468)
Q Consensus 177 ~~~p~lV~lHG~~~---s~~~~~~~~~~L--~~~~~V~~~D~~----G~---G-~--Ss----~~~~~~dl~~~i~~~~~ 237 (468)
++-|++|++||.+. ++.........+ .++.-|+++.+| |+ + . .+ +.|....+.-+-+.+.
T Consensus 110 ~~lPV~v~ihGG~~~~gs~~~~~~~~~~~~~~~~vvvVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~- 188 (542)
T d2ha2a1 110 SPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGNVGLLDQRLALQWVQENIA- 188 (542)
T ss_dssp SCEEEEEEECCSTTTCCCTTSGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCSSCCSCHHHHHHHHHHHHHHHHGG-
T ss_pred CCCcEEEEEEECccccccCcccccCchhhhhhccceeEeeeeeccceeeecccccccCCCcCCcccHHHHHHHHHHHHH-
Confidence 35699999999743 222211111223 356778888887 22 2 1 11 3343333332222222
Q ss_pred cCC--CCcEEEEEeChhHHHHHHHHHhC--CCCceEEEEeCCCC
Q 012190 238 SSP--EKPIYLVGDSFGGCLALAVAARN--PTIDLILILSNPAT 277 (468)
Q Consensus 238 ~~~--~~~i~LvGhS~GG~ia~~~a~~~--P~~v~~lVli~p~~ 277 (468)
..+ ..+|.|+|||.||..+..++... ...+.++|+.++..
T Consensus 189 ~FGGDP~~VTi~G~SAGa~sv~~ll~sp~~~~LF~~aI~~SG~~ 232 (542)
T d2ha2a1 189 AFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (542)
T ss_dssp GGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred HhhcCccccccccccccccchhhhhhhhhhhHHhhhheeecccc
Confidence 222 35899999999998887655432 25889999988755
|
| >d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Mammalian carboxylesterase (liver carboxylesterase I) species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.93 E-value=0.045 Score=53.51 Aligned_cols=99 Identities=10% Similarity=0.009 Sum_probs=57.0
Q ss_pred CCCeEEEeCCCCCc---hhhHHHhHhhhcCCeEEEEecCC----CC---CC--CC----hHHHHHHHHHHHHHHhhcCC-
Q 012190 178 GSPTLLFLPGIDGL---GLGLILHHKPLGKAFEVRCLHIP----VY---DR--TP----FEGLVKFVEETVRREHASSP- 240 (468)
Q Consensus 178 ~~p~lV~lHG~~~s---~~~~~~~~~~L~~~~~V~~~D~~----G~---G~--Ss----~~~~~~dl~~~i~~~~~~~~- 240 (468)
+-|++|++||.+.. +..+......-.++.-|+++.+| |+ +. .+ +.|....++-+-+.+. ..+
T Consensus 112 ~lPV~v~ihGG~~~~gs~~~~~~~~~~~~~~vIvVt~nYRLg~~GFl~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~-~FGG 190 (532)
T d2h7ca1 112 RLPVMVWIHGGGLMVGAASTYDGLALAAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQVAALRWVQDNIA-SFGG 190 (532)
T ss_dssp CEEEEEEECCSTTTSCCSTTSCCHHHHHHHTCEEEEECCCCHHHHHCCCSSTTCCCCHHHHHHHHHHHHHHHHGG-GGTE
T ss_pred CcEEEEEEeCCcccccccccCCchhhhhcCceEEEEEeeccCCCccccccccccccccccHHHHHHHHHHHHHHH-HhcC
Confidence 46899999997443 22222111112456778888887 22 11 11 3333333322222222 222
Q ss_pred -CCcEEEEEeChhHHHHHHHHHh--CCCCceEEEEeCCCC
Q 012190 241 -EKPIYLVGDSFGGCLALAVAAR--NPTIDLILILSNPAT 277 (468)
Q Consensus 241 -~~~i~LvGhS~GG~ia~~~a~~--~P~~v~~lVli~p~~ 277 (468)
..+|.|+|||.||..+...+.. ....+.++|+.++..
T Consensus 191 Dp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG~~ 230 (532)
T d2h7ca1 191 NPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVA 230 (532)
T ss_dssp EEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCT
T ss_pred CcceeeeeccccccchHHHHHhhhhccCcchhhhhhcccc
Confidence 3589999999998877655543 345889999988754
|
| >d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Esterase EstA species: Aspergillus niger [TaxId: 5061]
Probab=93.88 E-value=0.078 Score=51.61 Aligned_cols=99 Identities=12% Similarity=-0.008 Sum_probs=55.3
Q ss_pred CCCeEEEeCCCCCc---hhhH--HHhHhhhcCCeEEEEecCCC----CCCC-----------ChHHHHHHHHHHHHHHhh
Q 012190 178 GSPTLLFLPGIDGL---GLGL--ILHHKPLGKAFEVRCLHIPV----YDRT-----------PFEGLVKFVEETVRREHA 237 (468)
Q Consensus 178 ~~p~lV~lHG~~~s---~~~~--~~~~~~L~~~~~V~~~D~~G----~G~S-----------s~~~~~~dl~~~i~~~~~ 237 (468)
+-|++|++||.+-. ...+ ......-.++.-|+.+.+|= +=.+ .+.|....+.-+-+.+.
T Consensus 96 ~~PV~v~ihGG~~~~G~~~~~~~~~~~~~~~~~vVvVt~nYRlg~~GFl~~~~~~~~~~~N~Gl~Dq~~AL~WV~~nI~- 174 (517)
T d1ukca_ 96 KLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNGDLNAGLLDQRKALRWVKQYIE- 174 (517)
T ss_dssp CEEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHHSSCTTHHHHHHHHHHHHHHHHGG-
T ss_pred CceEEEEEcCCccccCCCccccchhhhhhhccccceEEEEecccceeecCccccccccccchhHHHHHHHHHHHHHHHH-
Confidence 35899999997422 2222 22222223456778888872 1111 13333333322222222
Q ss_pred cCC--CCcEEEEEeChhHHHHHHHH-Hh---CCCCceEEEEeCCCC
Q 012190 238 SSP--EKPIYLVGDSFGGCLALAVA-AR---NPTIDLILILSNPAT 277 (468)
Q Consensus 238 ~~~--~~~i~LvGhS~GG~ia~~~a-~~---~P~~v~~lVli~p~~ 277 (468)
..+ ..+|.|+|||.||..+...+ +- ....+.++|+.++..
T Consensus 175 ~FGGDp~~VTl~G~SAGa~sv~~~l~s~~~~~~gLF~raI~qSg~~ 220 (517)
T d1ukca_ 175 QFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFW 220 (517)
T ss_dssp GGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCC
T ss_pred hhcCCcccccccccccchhhHHHHHhccccccccccceeeeccccc
Confidence 122 45899999999988765443 32 234899999998754
|
| >d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Pacific electric ray (Torpedo californica) [TaxId: 7787]
Probab=93.64 E-value=0.053 Score=53.02 Aligned_cols=101 Identities=10% Similarity=-0.011 Sum_probs=57.2
Q ss_pred CCCCeEEEeCCCCC---chh--hHHHhHhhhcCCeEEEEecCC----CC---CCC-------ChHHHHHHHHHHHHHHhh
Q 012190 177 KGSPTLLFLPGIDG---LGL--GLILHHKPLGKAFEVRCLHIP----VY---DRT-------PFEGLVKFVEETVRREHA 237 (468)
Q Consensus 177 ~~~p~lV~lHG~~~---s~~--~~~~~~~~L~~~~~V~~~D~~----G~---G~S-------s~~~~~~dl~~~i~~~~~ 237 (468)
++.|++|++||.+. ++. .+....-...++.-|+++.+| |+ +.. .+.|+...+.-+-+.+.
T Consensus 104 ~~lPV~v~ihGG~~~~g~~~~~~~~~~~~~~~~~vvvVt~nYRlg~~GFl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~- 182 (532)
T d1ea5a_ 104 KSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAPGNVGLLDQRMALQWVHDNIQ- 182 (532)
T ss_dssp SSEEEEEEECCSTTTCCCTTCGGGCTHHHHHHHTCEEEECCCCCHHHHHCCCTTCSSSCSCHHHHHHHHHHHHHHHHGG-
T ss_pred CCCcEEEEEEcCCcccccCCccccCcchhhcccCccEEEEeeccccccccccccccCCCCcccchhHHHHHHHHHHHHH-
Confidence 35799999999642 221 121111122456777888876 22 111 13444333333322222
Q ss_pred cCC--CCcEEEEEeChhHHHHHHHHHh--CCCCceEEEEeCCCCC
Q 012190 238 SSP--EKPIYLVGDSFGGCLALAVAAR--NPTIDLILILSNPATS 278 (468)
Q Consensus 238 ~~~--~~~i~LvGhS~GG~ia~~~a~~--~P~~v~~lVli~p~~~ 278 (468)
..+ ..+|.|+|||.||..+...+.. ....+.++|+.++...
T Consensus 183 ~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lF~~aI~~Sg~~~ 227 (532)
T d1ea5a_ 183 FFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPN 227 (532)
T ss_dssp GGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTT
T ss_pred hhcCCccceEeeeecccccchhhhccCccchhhhhhheeeccccc
Confidence 222 3589999999998876655542 1257899999887654
|
| >d1g66a_ c.69.1.30 (A:) Acetylxylan esterase {Penicillium purpurogenum [TaxId: 28575]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Penicillium purpurogenum [TaxId: 28575]
Probab=92.81 E-value=0.38 Score=40.40 Aligned_cols=96 Identities=13% Similarity=0.050 Sum_probs=59.3
Q ss_pred eEEEeCCCCCch------hhHHHhHhhhcCCeEEEEecCCCCCC------CC----hHHHHHHHHHHHHHHhhcCCCCcE
Q 012190 181 TLLFLPGIDGLG------LGLILHHKPLGKAFEVRCLHIPVYDR------TP----FEGLVKFVEETVRREHASSPEKPI 244 (468)
Q Consensus 181 ~lV~lHG~~~s~------~~~~~~~~~L~~~~~V~~~D~~G~G~------Ss----~~~~~~dl~~~i~~~~~~~~~~~i 244 (468)
.||+..|.+.+. .....+.+.+. +..+..+++|.... .+ ..+=+..+...++....+.+..++
T Consensus 6 ~vi~arGT~E~~~~G~~~~~~~~~~~~~~-~~~~~~v~YpA~~~~~~~~~~~y~~Sv~~G~~~~~~~i~~~~~~CP~tk~ 84 (207)
T d1g66a_ 6 HVFGARETTASPGYGSSSTVVNGVLSAYP-GSTAEAINYPACGGQSSCGGASYSSSVAQGIAAVASAVNSFNSQCPSTKI 84 (207)
T ss_dssp EEEEECCTTCCSSCGGGHHHHHHHHHHST-TCEEEECCCCCCSSCGGGTSCCHHHHHHHHHHHHHHHHHHHHHHSTTCEE
T ss_pred EEEEeCCCCCCCCCCccHHHHHHHHHhcC-CCeeEEecccccccccccccccccccHHHHHHHHHHHHHHHHHhCCCCcE
Confidence 355556655321 12333334442 45677889986422 12 333455566666666666888999
Q ss_pred EEEEeChhHHHHHHHHHhC------------------CCCceEEEEeCCCC
Q 012190 245 YLVGDSFGGCLALAVAARN------------------PTIDLILILSNPAT 277 (468)
Q Consensus 245 ~LvGhS~GG~ia~~~a~~~------------------P~~v~~lVli~p~~ 277 (468)
+|+|+|.|+.++-.++... .++|.++++++-+.
T Consensus 85 vl~GYSQGA~V~~~~l~~~g~~~~~~~~~~~~l~~~~~~~v~avvl~GdP~ 135 (207)
T d1g66a_ 85 VLVGYSQGGEIMDVALCGGGDPNQGYTNTAVQLSSSAVNMVKAAIFMGDPM 135 (207)
T ss_dssp EEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCTT
T ss_pred EEEeeccccHHHHHHHhccCCccccccccccCCCchhhhceeeEEEecCCC
Confidence 9999999999998776421 13577888876543
|
| >d1qoza_ c.69.1.30 (A:) Acetylxylan esterase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Trichoderma reesei [TaxId: 51453]
Probab=92.68 E-value=0.45 Score=39.87 Aligned_cols=72 Identities=14% Similarity=0.118 Sum_probs=50.2
Q ss_pred CeEEEEecCCCCCCC------C----hHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhC-----------
Q 012190 205 AFEVRCLHIPVYDRT------P----FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARN----------- 263 (468)
Q Consensus 205 ~~~V~~~D~~G~G~S------s----~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~----------- 263 (468)
+-.+..+++|..-.. + ..+=+..+...++....+.+..+++|+|+|.|+.++-.++...
T Consensus 35 ~~~~~~v~YPA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~l~~~g~~~~~~~~~~ 114 (207)
T d1qoza_ 35 GTTSEAIVYPACGGQASCGGISYANSVVNGTNAAAAAINNFHNSCPDTQLVLVGYSQGAQIFDNALCGGGDPGEGITNTA 114 (207)
T ss_dssp TEEEEECCSCCCSSCGGGTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHCSCBGGGTBCCCS
T ss_pred CCeEEEeeecccccccccccccchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEeeccchHHHHHHHhccCccccccccCC
Confidence 466788898875321 2 2344555666666666668899999999999999998776421
Q ss_pred -------CCCceEEEEeCCC
Q 012190 264 -------PTIDLILILSNPA 276 (468)
Q Consensus 264 -------P~~v~~lVli~p~ 276 (468)
.++|.++++++-+
T Consensus 115 ~~l~~~~~~~V~avvl~GdP 134 (207)
T d1qoza_ 115 VPLTAGAVSAVKAAIFMGDP 134 (207)
T ss_dssp CCSCHHHHHHEEEEEEESCT
T ss_pred CCCChhhhhcEEEEEEEeCC
Confidence 1367888887643
|
| >d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Butyryl cholinesterase species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.49 E-value=0.096 Score=50.98 Aligned_cols=101 Identities=14% Similarity=0.046 Sum_probs=56.8
Q ss_pred CCCCeEEEeCCCCCc---hhhHHHhHhhh--cCCeEEEEecCC----C---C-CCC--C----hHHHHHHHHHHHHHHhh
Q 012190 177 KGSPTLLFLPGIDGL---GLGLILHHKPL--GKAFEVRCLHIP----V---Y-DRT--P----FEGLVKFVEETVRREHA 237 (468)
Q Consensus 177 ~~~p~lV~lHG~~~s---~~~~~~~~~~L--~~~~~V~~~D~~----G---~-G~S--s----~~~~~~dl~~~i~~~~~ 237 (468)
++.|++|++||.+.. +.....-...+ ..+.-|+++.+| | + +.. + +.|....+.-+-+.+.
T Consensus 102 ~~~PV~v~ihGG~~~~gs~~~~~~~~~~~~~~~~vVvVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~- 180 (526)
T d1p0ia_ 102 KNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPEAPGNMGLFDQQLALQWVQKNIA- 180 (526)
T ss_dssp SSEEEEEEECCSTTTSCCTTCGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCTTSCSCHHHHHHHHHHHHHHHHGG-
T ss_pred CCCceEEEEECCCcccccCcccccCccccccccceeEEecccccccccccCCCCcccccccccccchhhhhhhHHHHHH-
Confidence 356999999987533 22111111222 346777888876 2 1 111 1 3344333333322222
Q ss_pred cCC--CCcEEEEEeChhHHHHHHHHHh--CCCCceEEEEeCCCCC
Q 012190 238 SSP--EKPIYLVGDSFGGCLALAVAAR--NPTIDLILILSNPATS 278 (468)
Q Consensus 238 ~~~--~~~i~LvGhS~GG~ia~~~a~~--~P~~v~~lVli~p~~~ 278 (468)
..+ ..+|.|+|+|.||..+...+.. ....+.++|+.++...
T Consensus 181 ~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lf~~aI~~Sg~~~ 225 (526)
T d1p0ia_ 181 AFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSFN 225 (526)
T ss_dssp GGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCTT
T ss_pred HhhcCchheeehhhccccceeeccccCCcchhhhhhhhccccccc
Confidence 222 3589999999999887544432 2357888898877653
|
| >d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Bile-salt activated lipase (cholesterol esterase) species: Cow (Bos taurus) [TaxId: 9913]
Probab=92.01 E-value=0.24 Score=48.76 Aligned_cols=99 Identities=14% Similarity=0.086 Sum_probs=56.0
Q ss_pred CCCeEEEeCCCCC---chhh--HHH----hHhhh--cCCeEEEEecCC----CC---CCC------ChHHHHHHHHHHHH
Q 012190 178 GSPTLLFLPGIDG---LGLG--LIL----HHKPL--GKAFEVRCLHIP----VY---DRT------PFEGLVKFVEETVR 233 (468)
Q Consensus 178 ~~p~lV~lHG~~~---s~~~--~~~----~~~~L--~~~~~V~~~D~~----G~---G~S------s~~~~~~dl~~~i~ 233 (468)
+-|++|++||.+- ++.. +.. ....| ....-|+++.+| |+ +.. .+.|....+.-+-+
T Consensus 97 ~lPV~V~iHGG~f~~Gs~~~~~~~~~~~~dg~~la~~~~vIvVt~nYRlg~~GFl~~~~~~~~gN~Gl~Dq~~AL~WV~~ 176 (579)
T d2bcea_ 97 DLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDSNLPGNYGLWDQHMAIAWVKR 176 (579)
T ss_dssp SEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCCSSTTCCCCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCcccCCCCCCcccCCccccchhhhhccCCEEEEeecccccccccccccccCCCccchhhHHHHHHHHHhh
Confidence 4689999998743 2211 100 11233 234677888887 22 111 14444444333333
Q ss_pred HHhhcCC--CCcEEEEEeChhHHHHHHHHHh--CCCCceEEEEeCCCC
Q 012190 234 REHASSP--EKPIYLVGDSFGGCLALAVAAR--NPTIDLILILSNPAT 277 (468)
Q Consensus 234 ~~~~~~~--~~~i~LvGhS~GG~ia~~~a~~--~P~~v~~lVli~p~~ 277 (468)
.+.. .+ ..+|.|+|||.||..+...+.. ....++++|+.++..
T Consensus 177 nI~~-FGGDP~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~ 223 (579)
T d2bcea_ 177 NIEA-FGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGVG 223 (579)
T ss_dssp HGGG-GTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCCT
T ss_pred hhhh-hccCcCceEeeecccccchhhhhhhhhcccCccccceeccCCc
Confidence 3222 22 3579999999998877655432 346899999988654
|
| >d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=91.70 E-value=0.18 Score=49.53 Aligned_cols=101 Identities=13% Similarity=0.003 Sum_probs=54.9
Q ss_pred CCCCeEEEeCCCCC---chhhHHHhHhhh--cCCeEEEEecCC----CCC------------CCChHHHHHHHHHHHHHH
Q 012190 177 KGSPTLLFLPGIDG---LGLGLILHHKPL--GKAFEVRCLHIP----VYD------------RTPFEGLVKFVEETVRRE 235 (468)
Q Consensus 177 ~~~p~lV~lHG~~~---s~~~~~~~~~~L--~~~~~V~~~D~~----G~G------------~Ss~~~~~~dl~~~i~~~ 235 (468)
++-|++|++||.+. ++.........| ....-|+++.+| |+= ..+-..-..|...+++.+
T Consensus 137 ~~lPV~V~ihGG~f~~Gs~~~~~~~~~~l~~~~~vVvVtinYRlg~fGFl~~~~~~~~~~~~~~~gN~Gl~Dq~~AL~WV 216 (571)
T d1dx4a_ 137 NGLPILIWIYGGGFMTGSATLDIYNADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIRWL 216 (571)
T ss_dssp SSEEEEEEECCSTTTCCCTTCGGGCCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCCccCCCCcccccchhhhhhcCCeeEEeecceeccccccccccccccccccCCCCcccchHHHHHHHHH
Confidence 35789999999742 222111122233 224666778776 211 011111222333333332
Q ss_pred hh---cCC--CCcEEEEEeChhHHHHHHHHHh--CCCCceEEEEeCCCC
Q 012190 236 HA---SSP--EKPIYLVGDSFGGCLALAVAAR--NPTIDLILILSNPAT 277 (468)
Q Consensus 236 ~~---~~~--~~~i~LvGhS~GG~ia~~~a~~--~P~~v~~lVli~p~~ 277 (468)
+. ..+ ..+|.|+|||.||..+...+.. ....+.++|+.++..
T Consensus 217 ~~nI~~FGGDP~~VTl~G~SAGa~sv~~ll~sp~~~~lf~~aI~~Sg~~ 265 (571)
T d1dx4a_ 217 KDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 265 (571)
T ss_dssp HHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred HHhhhhhccCCCceEeccccCccceeeeeeccccccccccccceecccc
Confidence 22 122 3589999999999887655443 235788889887654
|