Citrus Sinensis ID: 012210
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
No hits with e-value below 0.001 by BLAST
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 468 | ||||||
| 224108405 | 597 | predicted protein [Populus trichocarpa] | 0.974 | 0.763 | 0.780 | 0.0 | |
| 359472659 | 584 | PREDICTED: uncharacterized protein LOC10 | 0.970 | 0.777 | 0.777 | 0.0 | |
| 255570661 | 595 | catalytic, putative [Ricinus communis] g | 0.972 | 0.764 | 0.781 | 0.0 | |
| 224101773 | 599 | predicted protein [Populus trichocarpa] | 0.974 | 0.761 | 0.761 | 0.0 | |
| 356534346 | 581 | PREDICTED: uncharacterized protein LOC10 | 0.978 | 0.788 | 0.735 | 0.0 | |
| 449458767 | 588 | PREDICTED: uncharacterized protein LOC10 | 0.982 | 0.782 | 0.735 | 0.0 | |
| 449503403 | 562 | PREDICTED: uncharacterized protein LOC10 | 0.982 | 0.818 | 0.735 | 0.0 | |
| 356574234 | 566 | PREDICTED: uncharacterized protein LOC10 | 0.957 | 0.791 | 0.728 | 0.0 | |
| 42562070 | 578 | PhaC and hydrolase domain-containing pro | 0.970 | 0.785 | 0.678 | 0.0 | |
| 297849934 | 575 | hypothetical protein ARALYDRAFT_888899 [ | 0.959 | 0.780 | 0.680 | 0.0 |
| >gi|224108405|ref|XP_002314836.1| predicted protein [Populus trichocarpa] gi|222863876|gb|EEF01007.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 740 bits (1910), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/465 (78%), Positives = 402/465 (86%), Gaps = 9/465 (1%)
Query: 1 MAGQGFDTWILEVRGAGLSVRGSNLKEAQQSAHGVSEQMEAVANSTTSEAFAKSATNGVY 60
M+GQGF+TWILEVRGAGLSV+GS K QQ+AH VSEQMEAV KS NG
Sbjct: 140 MSGQGFETWILEVRGAGLSVQGSTPKVVQQAAHEVSEQMEAVT---------KSMANGSL 190
Query: 61 SADPQLTDFPGALSDSKISPVKKEDDLTRLATVWDESKLVTKLTETFMSLSERLSGFLSE 120
S D Q + P +SDS++S V+++ L + TVWDESKLVTKLTE FM LSERLSGFLSE
Sbjct: 191 STDQQPSKVPSPVSDSRVSFVEEDPHLAGIVTVWDESKLVTKLTEVFMRLSERLSGFLSE 250
Query: 121 NQSKIMSAKLFDQISKLLEDSQLSEGFNEIRGKLSSLLERRQSSAIAIQIRDLSQNLVNM 180
+QSKIM AKL DQI+K+LEDSQLSE NEIRGKL SLLE RQ+SAIA Q RDLSQ LVN+
Sbjct: 251 SQSKIMFAKLVDQIAKILEDSQLSERMNEIRGKLLSLLEARQNSAIAGQFRDLSQGLVNV 310
Query: 181 IEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSK 240
IEEGQ SVSPQLFDLQERL STI+DFQKQLDLIV+YDWDFD+YLEEDVPAAMEYIRAQ+K
Sbjct: 311 IEEGQKSVSPQLFDLQERLSSTIEDFQKQLDLIVKYDWDFDNYLEEDVPAAMEYIRAQTK 370
Query: 241 PKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLA 300
PKDGKLLAIGHSMGGILLYAMLSRC +EGR+S LAAI TLASSL+YT SKS LKLLLPLA
Sbjct: 371 PKDGKLLAIGHSMGGILLYAMLSRCSYEGRDSGLAAIGTLASSLNYTPSKSRLKLLLPLA 430
Query: 301 DPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTI 360
DPAQALNVPVVPLGA+L+AAYPLS+ PPYV SWLN+LISA+DMMHPELL+KLVLNNFCTI
Sbjct: 431 DPAQALNVPVVPLGAMLSAAYPLSTRPPYVLSWLNDLISAQDMMHPELLEKLVLNNFCTI 490
Query: 361 PAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLL 420
PAKLILQL TAFR GGL DR GKFFY+DH+HK +P+LAIAGD+DLICPP AVEETVKL+
Sbjct: 491 PAKLILQLATAFRNGGLCDRSGKFFYQDHLHKNKVPVLAIAGDRDLICPPVAVEETVKLI 550
Query: 421 PEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465
PE L TYKVFGEP GPHYAHYDLVGGR+AVEQVYPCI++FL RYD
Sbjct: 551 PEHLATYKVFGEPGGPHYAHYDLVGGRLAVEQVYPCIIEFLSRYD 595
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359472659|ref|XP_002279891.2| PREDICTED: uncharacterized protein LOC100247521 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 734 bits (1896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/467 (77%), Positives = 400/467 (85%), Gaps = 13/467 (2%)
Query: 1 MAGQGFDTWILEVRGAGLSVRGSNLKEAQQSAHGVSEQMEAVANSTTSEAFAKSATNGVY 60
MAGQGFDTWILE RGAGLS++G N K+ +QSA+ +S+Q++A A SATNG
Sbjct: 129 MAGQGFDTWILEFRGAGLSMQGLNSKQIKQSANAISQQIKAAA----------SATNGTA 178
Query: 61 SADPQLTDF-PGALSDSKISPVKKEDDLTRLATVWDESKLVTKLTETFMSLSERLSGFLS 119
+ Q ++ PGAL +SKIS VK +D R+ATVWDESKLV KLTETFM LSERLSGFLS
Sbjct: 179 AKSAQQSNIVPGALEESKISAVK--EDTMRIATVWDESKLVMKLTETFMLLSERLSGFLS 236
Query: 120 ENQSKIMSAKLFDQISKLLEDSQLSEGFNEIRGKLSSLLERRQSSAIAIQIRDLSQNLVN 179
E Q KIMSAKLFDQISKL+EDSQLSE FNE+RG LS LLE RQ+S I QIRDLSQ LVN
Sbjct: 237 EGQLKIMSAKLFDQISKLIEDSQLSERFNEVRGNLSRLLETRQNSGITSQIRDLSQRLVN 296
Query: 180 MIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQS 239
+IEEGQ SVSPQLFDLQER STI+DFQKQLDLIV+YDWDFD YLEEDVPAAMEYI AQ+
Sbjct: 297 IIEEGQRSVSPQLFDLQERFSSTIEDFQKQLDLIVKYDWDFDQYLEEDVPAAMEYIMAQT 356
Query: 240 KPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPL 299
KPKDGKLLAIGHSMGGILLYA LS+ GFEGR+ RLAAIVTLASSLDYTSS S+LK+LLPL
Sbjct: 357 KPKDGKLLAIGHSMGGILLYARLSKYGFEGRDPRLAAIVTLASSLDYTSSNSSLKMLLPL 416
Query: 300 ADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCT 359
ADPAQALNVPVVPLGALL AAYPLSS PPYV SWLN LISAEDMMHP+LLKKLVLNNFCT
Sbjct: 417 ADPAQALNVPVVPLGALLAAAYPLSSGPPYVLSWLNYLISAEDMMHPKLLKKLVLNNFCT 476
Query: 360 IPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKL 419
IPAKL+LQLTTAFREGGL DR GKFFYKDH+HK N+P+LA+AGDQDLICPPEAV ET KL
Sbjct: 477 IPAKLLLQLTTAFREGGLCDRSGKFFYKDHLHKTNVPVLALAGDQDLICPPEAVYETAKL 536
Query: 420 LPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 466
+PE LVTY+VFG P GPHYAHYDLVGGR+AVEQVYP I++FL DS
Sbjct: 537 IPEHLVTYRVFGAPEGPHYAHYDLVGGRLAVEQVYPSIIEFLSSNDS 583
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255570661|ref|XP_002526285.1| catalytic, putative [Ricinus communis] gi|223534366|gb|EEF36074.1| catalytic, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 734 bits (1895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/466 (78%), Positives = 404/466 (86%), Gaps = 11/466 (2%)
Query: 1 MAGQGFDTWILEVRGAGLSVRGSNLKEAQQSAHGVSEQMEAVANSTTSEAFAKSATNGVY 60
M+GQGF+TW+LEVRGAGLSV+ +N KE QQSAH VS +MEA A + T+EA
Sbjct: 140 MSGQGFETWVLEVRGAGLSVQETNPKEIQQSAHAVSLEMEAAAKNVTNEALP-------- 191
Query: 61 SADPQLTDFPGALSDS-KISPVKKEDDLTRLATVWDESKLVTKLTETFMSLSERLSGFLS 119
S D + P + SDS KI VK +D T +ATVWDESKLVTKLTETFM LSERLSGFLS
Sbjct: 192 SIDQPTNNVPSSFSDSNKILTVK--EDPTGIATVWDESKLVTKLTETFMRLSERLSGFLS 249
Query: 120 ENQSKIMSAKLFDQISKLLEDSQLSEGFNEIRGKLSSLLERRQSSAIAIQIRDLSQNLVN 179
E Q KI+S KLFDQI+KLL DSQLSE FNEIRGKL SL+E RQ+S I QIRDLSQ LVN
Sbjct: 250 EGQLKIISDKLFDQIAKLLGDSQLSERFNEIRGKLLSLMETRQNSVITSQIRDLSQRLVN 309
Query: 180 MIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQS 239
+ EEGQ SVSPQLFDLQERL +TI+DFQKQLDLIV+YDWDFD+YLEEDVPAAMEYIRA+S
Sbjct: 310 IFEEGQKSVSPQLFDLQERLSATIEDFQKQLDLIVKYDWDFDNYLEEDVPAAMEYIRAKS 369
Query: 240 KPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPL 299
KPKDGKLLAIGHSMGGILLYAMLSRCG EGR+S LAA+VTLASS+DYTSS S LKLLLPL
Sbjct: 370 KPKDGKLLAIGHSMGGILLYAMLSRCGCEGRDSGLAAVVTLASSVDYTSSNSRLKLLLPL 429
Query: 300 ADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCT 359
ADPAQALNVPVVPLGALL+AAYPLSS PPYV SWLN +ISAEDMMHPELL+KLVLNNFCT
Sbjct: 430 ADPAQALNVPVVPLGALLSAAYPLSSRPPYVLSWLNYMISAEDMMHPELLEKLVLNNFCT 489
Query: 360 IPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKL 419
IPAKLILQLTTAFR+GGL DR GK+FYKDH+HK N+P+LA+AGD+DLICPPEAVEETV+L
Sbjct: 490 IPAKLILQLTTAFRDGGLCDRSGKYFYKDHLHKSNVPVLALAGDEDLICPPEAVEETVRL 549
Query: 420 LPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465
+PE LVTYKVFGEP GPHYAHYDLVGGR+AVEQVYPCI+QFL +D
Sbjct: 550 IPEHLVTYKVFGEPGGPHYAHYDLVGGRLAVEQVYPCIIQFLSHHD 595
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224101773|ref|XP_002312415.1| predicted protein [Populus trichocarpa] gi|222852235|gb|EEE89782.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/465 (76%), Positives = 396/465 (85%), Gaps = 9/465 (1%)
Query: 1 MAGQGFDTWILEVRGAGLSVRGSNLKEAQQSAHGVSEQMEAVANSTTSEAFAKSATNGVY 60
M+ QGF+TWILEVRGAGLS++GS K+ QSAH VSE+MEAVA KS TNG
Sbjct: 142 MSDQGFETWILEVRGAGLSIQGSTPKDVHQSAHEVSEEMEAVA---------KSVTNGTL 192
Query: 61 SADPQLTDFPGALSDSKISPVKKEDDLTRLATVWDESKLVTKLTETFMSLSERLSGFLSE 120
S D Q ++ P SDS++S V+++ L + +VWDESKLVTKLTE FM LSERLSGFLSE
Sbjct: 193 SVDQQPSNVPSPPSDSRVSLVEEDSHLAGIVSVWDESKLVTKLTEIFMRLSERLSGFLSE 252
Query: 121 NQSKIMSAKLFDQISKLLEDSQLSEGFNEIRGKLSSLLERRQSSAIAIQIRDLSQNLVNM 180
++ KIM A+L DQISKLL DSQLSE NEIRGKL SLLE RQ+SAIA Q RDLSQ LVN+
Sbjct: 253 SELKIMFAELVDQISKLLVDSQLSERMNEIRGKLLSLLEARQNSAIAGQFRDLSQGLVNV 312
Query: 181 IEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSK 240
IEEGQ SVSPQLFDLQERL S I+DFQKQLDLIV+YDWDFD+YLEEDVPAAMEYIRA +K
Sbjct: 313 IEEGQKSVSPQLFDLQERLSSIIEDFQKQLDLIVKYDWDFDNYLEEDVPAAMEYIRALTK 372
Query: 241 PKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLA 300
PKDGKLLAIGHSMGGILLYAMLSRCG++GR+S LAA VTLASSLDYT S S LKLLLPLA
Sbjct: 373 PKDGKLLAIGHSMGGILLYAMLSRCGWDGRDSGLAATVTLASSLDYTPSNSRLKLLLPLA 432
Query: 301 DPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTI 360
DPAQALNVPVVPLGA+L+AAYPLS+ PPYV SWLN+ ISA DMMHPELL+KLVLNNFCTI
Sbjct: 433 DPAQALNVPVVPLGAMLSAAYPLSTRPPYVLSWLNDFISARDMMHPELLEKLVLNNFCTI 492
Query: 361 PAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLL 420
PAKL+LQLTTAF+ GL DR GKFFYK+H+HK N+P+LAIAGDQDLICPPEAVEETV+L
Sbjct: 493 PAKLLLQLTTAFQNRGLCDRSGKFFYKEHLHKSNVPVLAIAGDQDLICPPEAVEETVRLF 552
Query: 421 PEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465
PE L +YKVFGEP GPHYAHYDLVGGR AVEQVYPCI++FL R D
Sbjct: 553 PEHLASYKVFGEPGGPHYAHYDLVGGRKAVEQVYPCIIEFLSRCD 597
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356534346|ref|XP_003535717.1| PREDICTED: uncharacterized protein LOC100776497 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/473 (73%), Positives = 398/473 (84%), Gaps = 15/473 (3%)
Query: 1 MAGQGFDTWILEVRGAGLSVRGSNLKEAQQSAHGVSEQMEAVANSTTSEAFAKSATNGVY 60
M+ QGF+TWILEVRGAGLSV+GSN K+ +QSA+ +SE+MEA + S T ATNG
Sbjct: 115 MSSQGFETWILEVRGAGLSVQGSNSKDIEQSANAMSEKMEAASESAT-------ATNGAV 167
Query: 61 SADPQLTDFPGALSDSKISP--------VKKEDDLTRLATVWDESKLVTKLTETFMSLSE 112
+++ +L + A+S+ +IS V + DLTRL TVWDESKLV +LTET M LSE
Sbjct: 168 ASNKELNNIYCAVSEPEISTPNGVETENVAIKGDLTRLGTVWDESKLVARLTETLMFLSE 227
Query: 113 RLSGFLSENQSKIMSAKLFDQISKLLEDSQLSEGFNEIRGKLSSLLERRQSSAIAIQIRD 172
R+SGFLSE+QS++M AK DQISKLL DS L E +NE+R KLS+L E +Q++ I QI D
Sbjct: 228 RVSGFLSESQSRVMFAKFLDQISKLLVDSPLYEQYNEVREKLSTLFETKQNAGITSQITD 287
Query: 173 LSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAM 232
LSQ LVN+IEEGQLSVSPQLFDLQ R STI+DFQKQLDL+V+YDWDFDHY+EEDVPAA+
Sbjct: 288 LSQKLVNIIEEGQLSVSPQLFDLQARFTSTIEDFQKQLDLMVKYDWDFDHYMEEDVPAAI 347
Query: 233 EYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKST 292
EYI QS PKDGKLLAIGHSMGGILLY+MLSR GFEG++S LAA+VTLASSLDYTSSKST
Sbjct: 348 EYIMKQSMPKDGKLLAIGHSMGGILLYSMLSRFGFEGKDSNLAAVVTLASSLDYTSSKST 407
Query: 293 LKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKL 352
LKLLLPLADPAQALNVPVVPLGA+L AAYPLSS PPYVFSWLN LISAEDMM P+LLK+L
Sbjct: 408 LKLLLPLADPAQALNVPVVPLGAMLAAAYPLSSRPPYVFSWLNTLISAEDMMDPDLLKRL 467
Query: 353 VLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEA 412
VLNNFCTIPAKL+LQLTTAFRE GL +R G FFYKDH+HK NIPILAIAGDQDLICPPEA
Sbjct: 468 VLNNFCTIPAKLVLQLTTAFRERGLCNRNGTFFYKDHLHKNNIPILAIAGDQDLICPPEA 527
Query: 413 VEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465
VEETVKL+PE LVTYKVFGEP G HYAHYDLVGGR+AVEQVYPCI++FL +D
Sbjct: 528 VEETVKLIPEHLVTYKVFGEPEGSHYAHYDLVGGRLAVEQVYPCIIEFLSCHD 580
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449458767|ref|XP_004147118.1| PREDICTED: uncharacterized protein LOC101217845 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 702 bits (1813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/473 (73%), Positives = 395/473 (83%), Gaps = 13/473 (2%)
Query: 1 MAGQGFDTWILEVRGAGLSVRGSNLKEAQQSAHGVSEQMEAVANSTTSEAFAKSATNGVY 60
M+GQGFDTWILEVRGAGLS++ NLKE + SA S++MEA SE + V
Sbjct: 123 MSGQGFDTWILEVRGAGLSLQEPNLKEIEHSAKVKSDKMEA-----ASEIKINGTSKEVK 177
Query: 61 SADPQLTDFPGALSDSKI------SPVKKEDDLTRLATVWDESKLVTKLTETFMSLSERL 114
+ L+D A SDS I S + +E+D + T+WDES LV++LTETFM LSERL
Sbjct: 178 ESTKILSDL--AKSDSCINGKESASSMVEEEDFIGITTIWDESSLVSELTETFMRLSERL 235
Query: 115 SGFLSENQSKIMSAKLFDQISKLLEDSQLSEGFNEIRGKLSSLLERRQSSAIAIQIRDLS 174
SGFLSE QS+IMSAKLFDQISKLL DSQLSE FNE+RG+LS+LLE Q+S IA QIRDLS
Sbjct: 236 SGFLSEGQSRIMSAKLFDQISKLLVDSQLSERFNEVRGRLSNLLETGQTSVIAGQIRDLS 295
Query: 175 QNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEY 234
Q LV +I++GQ SVSP LF+LQ+R STIDDFQKQLDLIV+YDWDFDHYL EDVPAA++Y
Sbjct: 296 QRLVEIIDDGQRSVSPPLFNLQDRFSSTIDDFQKQLDLIVKYDWDFDHYLLEDVPAAIDY 355
Query: 235 IRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLK 294
IR SKP+DGKLLAIGHSMGGILLYA LSRCG EGR+ R AAIVTLASSLDYT SKS LK
Sbjct: 356 IRDVSKPRDGKLLAIGHSMGGILLYAELSRCGCEGRDPRFAAIVTLASSLDYTPSKSALK 415
Query: 295 LLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVL 354
LLLPLADPAQALNVPVVPLGALL+A+YPLSS PYVFSWLNNLISAEDMMHPE+LKKLVL
Sbjct: 416 LLLPLADPAQALNVPVVPLGALLSASYPLSSRSPYVFSWLNNLISAEDMMHPEMLKKLVL 475
Query: 355 NNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVE 414
NNFCTIPAKL+LQLTTAFREGGLRDR FFYKDHIHKCN+P+LAIAGDQDLICPP AVE
Sbjct: 476 NNFCTIPAKLVLQLTTAFREGGLRDRSNTFFYKDHIHKCNVPVLAIAGDQDLICPPVAVE 535
Query: 415 ETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDSV 467
ET KL+P+ LVTYK FGEP GPHYAHYDLVGGR+AVEQVYPCI++F+ ++D++
Sbjct: 536 ETAKLIPQHLVTYKCFGEPEGPHYAHYDLVGGRLAVEQVYPCIIEFISQHDAI 588
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449503403|ref|XP_004161985.1| PREDICTED: uncharacterized protein LOC101228788 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/473 (73%), Positives = 395/473 (83%), Gaps = 13/473 (2%)
Query: 1 MAGQGFDTWILEVRGAGLSVRGSNLKEAQQSAHGVSEQMEAVANSTTSEAFAKSATNGVY 60
M+GQGFDTWILEVRGAGLS++ NLKE + SA S++MEA SE + V
Sbjct: 97 MSGQGFDTWILEVRGAGLSLQEPNLKEIEHSAKVKSDKMEA-----ASEIKINGTSKEVK 151
Query: 61 SADPQLTDFPGALSDSKI------SPVKKEDDLTRLATVWDESKLVTKLTETFMSLSERL 114
+ L+D A SDS I S + +E+D + T+WDES LV++LTETFM LSERL
Sbjct: 152 ESTKILSDL--AKSDSCINGKESASSMVEEEDFIGITTIWDESSLVSELTETFMRLSERL 209
Query: 115 SGFLSENQSKIMSAKLFDQISKLLEDSQLSEGFNEIRGKLSSLLERRQSSAIAIQIRDLS 174
SGFLSE QS+IMSAKLFDQISKLL DSQLSE FNE+RG+LS+LLE Q+S IA QIRDLS
Sbjct: 210 SGFLSEGQSRIMSAKLFDQISKLLVDSQLSERFNEVRGRLSNLLETGQTSVIAGQIRDLS 269
Query: 175 QNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEY 234
Q LV +I++GQ SVSP LF+LQ+R STIDDFQKQLDLIV+YDWDFDHYL EDVPAA++Y
Sbjct: 270 QRLVEIIDDGQRSVSPPLFNLQDRFSSTIDDFQKQLDLIVKYDWDFDHYLLEDVPAAIDY 329
Query: 235 IRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLK 294
IR SKP+DGKLLAIGHSMGGILLYA LSRCG EGR+ R AAIVTLASSLDYT SKS LK
Sbjct: 330 IRDVSKPRDGKLLAIGHSMGGILLYAELSRCGCEGRDPRFAAIVTLASSLDYTPSKSALK 389
Query: 295 LLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVL 354
LLLPLADPAQALNVPVVPLGALL+A+YPLSS PYVFSWLNNLISAEDMMHPE+LKKLVL
Sbjct: 390 LLLPLADPAQALNVPVVPLGALLSASYPLSSRSPYVFSWLNNLISAEDMMHPEMLKKLVL 449
Query: 355 NNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVE 414
NNFCTIPAKL+LQLTTAFREGGLRDR FFYKDHIHKCN+P+LAIAGDQDLICPP AVE
Sbjct: 450 NNFCTIPAKLVLQLTTAFREGGLRDRSNTFFYKDHIHKCNVPVLAIAGDQDLICPPVAVE 509
Query: 415 ETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDSV 467
ET KL+P+ LVTYK FGEP GPHYAHYDLVGGR+AVEQVYPCI++F+ ++D++
Sbjct: 510 ETAKLIPQHLVTYKCFGEPEGPHYAHYDLVGGRLAVEQVYPCIIEFISQHDAI 562
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356574234|ref|XP_003555255.1| PREDICTED: uncharacterized protein LOC100793924 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 697 bits (1798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/471 (72%), Positives = 388/471 (82%), Gaps = 23/471 (4%)
Query: 1 MAGQGFDTWILEVRGAGLSVRGSNLKEAQQSAHGVSEQMEAVANSTTSEAFAK------S 54
M+GQGF+TWILEVRGAGLS++GSN K+ +QSA+ +SE+M+A + + +F S
Sbjct: 112 MSGQGFETWILEVRGAGLSIQGSNSKDIEQSANAMSEKMKAASEKLNNVSFCAVSEPEIS 171
Query: 55 ATNGVYSADPQLTDFPGALSDSKISPVKKEDDLTRLATVWDESKLVTKLTETFMSLSERL 114
A NGV + + V + DLTRL TVWDESKLV +LTET M LSER+
Sbjct: 172 APNGVETEN-----------------VAIQGDLTRLGTVWDESKLVARLTETLMFLSERV 214
Query: 115 SGFLSENQSKIMSAKLFDQISKLLEDSQLSEGFNEIRGKLSSLLERRQSSAIAIQIRDLS 174
SGFLSE+QS++M K DQISKLL DS L E FNE+RGKLS+L E +Q++ I QI DLS
Sbjct: 215 SGFLSESQSRVMFTKFLDQISKLLVDSPLYEQFNEVRGKLSTLFETKQNTGITSQITDLS 274
Query: 175 QNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEY 234
Q LVN+IEEGQLSVSP LFDLQ R STI+DFQKQLDL+V+YDWDFDHYLEEDVPAA+EY
Sbjct: 275 QKLVNIIEEGQLSVSPPLFDLQARFTSTIEDFQKQLDLMVKYDWDFDHYLEEDVPAAIEY 334
Query: 235 IRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLK 294
I QS PKDGKLLAIGHSMGGILLY+MLSR GFEG+ES LAA+VTLASSLDYTSSKSTLK
Sbjct: 335 IMKQSMPKDGKLLAIGHSMGGILLYSMLSRFGFEGKESNLAAVVTLASSLDYTSSKSTLK 394
Query: 295 LLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVL 354
LLLPLADPAQALNVPVVPLGA+L AAYPLSS PPYVFSWLN LISAEDMM P+LLK+LVL
Sbjct: 395 LLLPLADPAQALNVPVVPLGAMLAAAYPLSSRPPYVFSWLNTLISAEDMMDPDLLKRLVL 454
Query: 355 NNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVE 414
NNFCTIPAKL+LQLTTAFRE GL +R G FFYKDH+HK N PILAIAGDQDLICPPEAVE
Sbjct: 455 NNFCTIPAKLVLQLTTAFRERGLCNRNGTFFYKDHLHKSNTPILAIAGDQDLICPPEAVE 514
Query: 415 ETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465
ETVKL+PE LVTYKVFGEP G HYAHYDLVGGR+AVEQVYPCI++FL +D
Sbjct: 515 ETVKLIPEHLVTYKVFGEPGGSHYAHYDLVGGRLAVEQVYPCIIEFLSCHD 565
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Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|42562070|ref|NP_172960.2| PhaC and hydrolase domain-containing protein [Arabidopsis thaliana] gi|19699290|gb|AAL91256.1| At1g15070/F9L1_1 [Arabidopsis thaliana] gi|24111379|gb|AAN46813.1| At1g15070/F9L1_1 [Arabidopsis thaliana] gi|51970192|dbj|BAD43788.1| unknown protein [Arabidopsis thaliana] gi|332191141|gb|AEE29262.1| PhaC and hydrolase domain-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 664 bits (1712), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/466 (67%), Positives = 384/466 (82%), Gaps = 12/466 (2%)
Query: 1 MAGQGFDTWILEVRGAGLSVRGSNLKEAQQSAHGVSEQMEAVANSTTSEAFAKSATNGVY 60
M+GQGF+TWILEVRGAGLS R S+LK+ ++SAH +S Q+E+ A + +A
Sbjct: 124 MSGQGFETWILEVRGAGLSTRVSDLKDVEESAHELSNQIESTARA--------AAGKETC 175
Query: 61 SADPQLTDFPGALSDSKISPVKKEDDLTRLATVWDESKLVTKLTETFMSLSERLSGFLSE 120
S + Q TD + DS + + A+ WDES+LV +LT TFMSLSERLSGFLSE
Sbjct: 176 SDEKQTTD----IMDSSAPAPASDVSVVGEASAWDESQLVARLTSTFMSLSERLSGFLSE 231
Query: 121 NQSKIMSAKLFDQISKLLEDSQLSEGFNEIRGKLSSLLERRQSSAIAIQIRDLSQNLVNM 180
QS MSAKLFD+I+ L++D+QL E FN+IR KL SL+E +Q+S + Q+RDL+Q LVN+
Sbjct: 232 GQSVFMSAKLFDKIAMLVDDTQLYERFNDIRSKLLSLIESKQNSGLVNQVRDLAQRLVNL 291
Query: 181 IEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSK 240
++GQ SVSP L DLQERL +TI+DFQKQLDLIV+YDWDFDHYLEEDVPAA+EY+RAQSK
Sbjct: 292 FDDGQRSVSPPLIDLQERLTATIEDFQKQLDLIVKYDWDFDHYLEEDVPAAIEYVRAQSK 351
Query: 241 PKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLA 300
PKDGKL AIGHSMGGILLYAMLSRC FEGRE +AA+ TLASS+DYT+S S LKLL+PLA
Sbjct: 352 PKDGKLFAIGHSMGGILLYAMLSRCAFEGREPSVAAVATLASSVDYTTSNSALKLLIPLA 411
Query: 301 DPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTI 360
+PA+AL+VPVVPLGALL AA+PLS+ PPYV SWLN+LIS+ DMMHPE+L+KLVLNNFCTI
Sbjct: 412 NPAEALSVPVVPLGALLAAAFPLSTRPPYVLSWLNDLISSTDMMHPEMLEKLVLNNFCTI 471
Query: 361 PAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLL 420
PAKL++QLTTAFREGGLRDR GKF+YKDH+ + ++P+LA+AGD+DLICPP AVE+TVKL
Sbjct: 472 PAKLLIQLTTAFREGGLRDRSGKFYYKDHLPRTSVPVLALAGDRDLICPPAAVEDTVKLF 531
Query: 421 PEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 466
PE+LVTYK+ GEP GPHYAHYDLVGGR+AVEQVYPCI +FL +DS
Sbjct: 532 PENLVTYKLLGEPDGPHYAHYDLVGGRLAVEQVYPCITEFLSHHDS 577
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297849934|ref|XP_002892848.1| hypothetical protein ARALYDRAFT_888899 [Arabidopsis lyrata subsp. lyrata] gi|297338690|gb|EFH69107.1| hypothetical protein ARALYDRAFT_888899 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 659 bits (1699), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/469 (68%), Positives = 383/469 (81%), Gaps = 20/469 (4%)
Query: 1 MAGQGFDTWILEVRGAGLSVRGSNLKEAQQSAHGVSEQMEAVANSTTSEAFA---KSATN 57
M+GQGF+TWILEVRGAGLS R S+LK+ ++SAH +S ++E+ A + + AT+
Sbjct: 123 MSGQGFETWILEVRGAGLSTRVSDLKDVEESAHELSNRIESTARAAAGKESCSDENKATD 182
Query: 58 GVYSADPQLTDFPGALSDSKISPVKKEDDLTRLATVWDESKLVTKLTETFMSLSERLSGF 117
V S+ P S +S V + A+ WDES+LV +LT TFM LSERLSGF
Sbjct: 183 IVDSSAPA----------SDVSVVGE-------ASAWDESQLVARLTSTFMRLSERLSGF 225
Query: 118 LSENQSKIMSAKLFDQISKLLEDSQLSEGFNEIRGKLSSLLERRQSSAIAIQIRDLSQNL 177
LSE QS MSAKLFD+I+ L++D+QL E FNEIR KL SL+E RQ+S + QIRDL+Q L
Sbjct: 226 LSEGQSVFMSAKLFDKIAMLVDDTQLYERFNEIRSKLLSLIESRQNSGLVNQIRDLAQRL 285
Query: 178 VNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRA 237
VN+ ++GQ SVSP L DLQERL +TI+DFQKQLDLIV+YDWDFDHYLEEDVPAA+EY+RA
Sbjct: 286 VNLFDDGQRSVSPPLIDLQERLTATIEDFQKQLDLIVKYDWDFDHYLEEDVPAAIEYVRA 345
Query: 238 QSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLL 297
QSKPKDGKL AIGHSMGGILLYAMLSRC FEGRE +AA+ TLASS+DYT+S S LKLL+
Sbjct: 346 QSKPKDGKLFAIGHSMGGILLYAMLSRCAFEGREPSVAAVATLASSVDYTTSDSALKLLI 405
Query: 298 PLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNF 357
PLA+PA+AL+VPVVPLGALL AA+PLS+ PPYV SWLN+LIS+ DMMHPELL+KLVLNNF
Sbjct: 406 PLANPAEALSVPVVPLGALLAAAFPLSTRPPYVLSWLNDLISSTDMMHPELLEKLVLNNF 465
Query: 358 CTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETV 417
CTIPAKL++QLTTAFREGGLRDR GKF YKDH+ + ++P+LA+AGD+DLICPP AVE+TV
Sbjct: 466 CTIPAKLLIQLTTAFREGGLRDRSGKFSYKDHLPRTSVPVLALAGDRDLICPPAAVEDTV 525
Query: 418 KLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 466
KL PE+LVTYK+ GEP GPHYAHYDLVGGR+AVEQVYPCI +FL +DS
Sbjct: 526 KLFPENLVTYKLLGEPEGPHYAHYDLVGGRLAVEQVYPCITEFLSHHDS 574
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 468 | ||||||
| TAIR|locus:2196179 | 578 | AT1G15060 [Arabidopsis thalian | 0.967 | 0.783 | 0.642 | 7e-157 | |
| TAIR|locus:2027784 | 452 | AT1G73750 "AT1G73750" [Arabido | 0.677 | 0.701 | 0.496 | 1.7e-90 | |
| DICTYBASE|DDB_G0268966 | 414 | lip1 "lipase family member 1" | 0.188 | 0.212 | 0.329 | 2e-05 |
| TAIR|locus:2196179 AT1G15060 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1529 (543.3 bits), Expect = 7.0e-157, P = 7.0e-157
Identities = 300/467 (64%), Positives = 362/467 (77%)
Query: 1 MAGQGFDTWILEVRGAGLSVRGSNLKEAQQSAHGVSEQMEAVANSTTSEAFAKSATNGVY 60
M+GQGF+TWILEVRGAGLS R S+LK+ ++SAH +S Q+E+ T+ A A T
Sbjct: 124 MSGQGFETWILEVRGAGLSTRVSDLKDVEESAHELSNQIES-----TARAAAGKET---C 175
Query: 61 SADPQLTDFPGALSDSKISPVKKED-DLTRLATVWDESKLVTKLTETFMSLSERLSGFLS 119
S + Q TD + DS +P D + A+ WDES+LV +LT TFMSLSERLSGFLS
Sbjct: 176 SDEKQTTD----IMDSS-APAPASDVSVVGEASAWDESQLVARLTSTFMSLSERLSGFLS 230
Query: 120 ENQSKIMSAKLFDQISKLLEDSQLSEGFNEIRGKLSSLLERRQSSAIAIQIRDLSQNLVN 179
E QS MSAKLFD+I+ L++D+QL E FN+IR KL SL+E +Q+S + Q+RDL+Q LVN
Sbjct: 231 EGQSVFMSAKLFDKIAMLVDDTQLYERFNDIRSKLLSLIESKQNSGLVNQVRDLAQRLVN 290
Query: 180 MIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQS 239
+ ++GQ SVSP L DLQERL +TI+DFQKQLDLIV+YDWDFDHYLEEDVPAA+EY+RAQS
Sbjct: 291 LFDDGQRSVSPPLIDLQERLTATIEDFQKQLDLIVKYDWDFDHYLEEDVPAAIEYVRAQS 350
Query: 240 KPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTXXXXXXXXXXXXXXXXXXXX 299
KPKDGKL AIGHSMGGILLYAMLSRC FEGRE +AA+ T
Sbjct: 351 KPKDGKLFAIGHSMGGILLYAMLSRCAFEGREPSVAAVATLASSVDYTTSNSALKLLIPL 410
Query: 300 XXXXXXXNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCT 359
+VPVVPLGALL AA+PLS+ PPYV SWLN+LIS+ DMMHPE+L+KLVLNNFCT
Sbjct: 411 ANPAEALSVPVVPLGALLAAAFPLSTRPPYVLSWLNDLISSTDMMHPEMLEKLVLNNFCT 470
Query: 360 IPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKL 419
IPAKL++QLTTAFREGGLRDR GKF+YKDH+ + ++P+LA+AGD+DLICPP AVE+TVKL
Sbjct: 471 IPAKLLIQLTTAFREGGLRDRSGKFYYKDHLPRTSVPVLALAGDRDLICPPAAVEDTVKL 530
Query: 420 LPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 466
PE+LVTYK+ GEP GPHYAHYDLVGGR+AVEQVYPCI +FL +DS
Sbjct: 531 FPENLVTYKLLGEPDGPHYAHYDLVGGRLAVEQVYPCITEFLSHHDS 577
|
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| TAIR|locus:2027784 AT1G73750 "AT1G73750" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 830 (297.2 bits), Expect = 1.7e-90, Sum P(2) = 1.7e-90
Identities = 165/332 (49%), Positives = 219/332 (65%)
Query: 134 ISKLLEDSQLSEGFNEIRGKLSSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLF 193
+S L D+ L +G N+ R +S+LLE + I++ S+ L N+++ G ++
Sbjct: 134 LSSLSVDTNLGKGNNQQR-IVSNLLE----NFISV-----SERLENVLDGGS-----KIL 178
Query: 194 DLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSM 253
+Q+RL DF+++ +LI Y+WDFD+YLEEDVP+AM+Y+R Q+K KDGKLLA+GHSM
Sbjct: 179 GMQDRLSKRAGDFKQRFELIPHYNWDFDNYLEEDVPSAMDYVRTQTKSKDGKLLAVGHSM 238
Query: 254 GGILLYAMLSRCGFEGRESRLAAIVTXXXXXXXXXXXXXXXXXXXXXXXXXXXNVPVVPL 313
GGILLYA+LSRCGF+G +S LA + T N+P++P+
Sbjct: 239 GGILLYALLSRCGFKGMDSGLAGVTTLASTFDYSSSGTLLKYLLPMKEPAQAINLPIMPI 298
Query: 314 GALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFR 373
+L A+PL PPY SWL ISA MM PE+++KLVLN+ CT+P KL+LQLTTA
Sbjct: 299 DTMLAMAHPLMCRPPYSLSWLTANISAPQMMDPEVIEKLVLNSLCTVPVKLLLQLTTAVD 358
Query: 374 EGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEP 433
GGLRDR G F YKDHI K N+PILA+AGD D+ICPP+AV +TVKL+PE L TYKV G P
Sbjct: 359 HGGLRDRTGTFCYKDHISKTNVPILALAGDWDIICPPDAVYDTVKLIPEHLATYKVVGSP 418
Query: 434 SGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465
GPHY H DL+ GR A +VYP I +FL + D
Sbjct: 419 GGPHYGHQDLISGRTARNEVYPLITRFLQQQD 450
|
|
| DICTYBASE|DDB_G0268966 lip1 "lipase family member 1" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 110 (43.8 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 31/94 (32%), Positives = 46/94 (48%)
Query: 375 GGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPS 434
G L+ G K I + N P++A +G QD + P+ V + L + LV YK
Sbjct: 327 GNLQHYGQSTPPKYDITQFNTPVIAFSGGQDFLADPDDVAWLIPQL-KSLVYYKNL---- 381
Query: 435 GPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDSVS 468
P Y+H D V G A VY +V +L +Y +V+
Sbjct: 382 -PTYSHLDFVWGETAYIDVYADVVTYLTKYSTVN 414
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.3.1 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | AT1G15060 | unknown protein; LOCATED IN- chloroplast; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 14 growth stages; CONTAINS InterPro DOMAIN/s- Uncharacterised conserved protein UCP031088, alpha/beta hydrolase, At1g15070 (InterPro-IPR016969); BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT1G73750.1); Has 120 Blast hits to 104 proteins in 29 species- Archae - 0; Bacteria - 61; Metazoa - 1; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 11 (source- NCBI BLink). (578 aa) | |||||||||
(Arabidopsis thaliana) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 468 | |||
| COG3243 | 445 | COG3243, PhaC, Poly(3-hydroxyalkanoate) synthetase | 2e-07 | |
| pfam00561 | 226 | pfam00561, Abhydrolase_1, alpha/beta hydrolase fol | 5e-06 | |
| pfam12697 | 187 | pfam12697, Abhydrolase_6, Alpha/beta hydrolase fam | 1e-05 | |
| COG0596 | 282 | COG0596, MhpC, Predicted hydrolases or acyltransfe | 2e-05 | |
| TIGR01836 | 350 | TIGR01836, PHA_synth_III_C, poly(R)-hydroxyalkanoi | 0.001 | |
| pfam01738 | 215 | pfam01738, DLH, Dienelactone hydrolase family | 0.001 | |
| pfam12695 | 145 | pfam12695, Abhydrolase_5, Alpha/beta hydrolase fam | 0.002 | |
| TIGR02427 | 251 | TIGR02427, protocat_pcaD, 3-oxoadipate enol-lacton | 0.003 |
| >gnl|CDD|225783 COG3243, PhaC, Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 52.4 bits (126), Expect = 2e-07
Identities = 47/258 (18%), Positives = 85/258 (32%), Gaps = 63/258 (24%)
Query: 218 WDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAI 277
+ + Y+ E + A++ ++ + KD + IG+ +GG LL A L+ R+ ++
Sbjct: 157 KNLEDYILEGLSEAIDTVKDITGQKD--INLIGYCVGGTLLAAALAL----MAAKRIKSL 210
Query: 278 VTLASSLDYTSSKSTLKLLLPL---------ADPAQALNVPVVPLGALLTAAYPLSSSPP 328
L S +D++ L + AD Q +P + + P
Sbjct: 211 TLLTSPVDFS---HAGDLGIFANEATIEALDADIVQKGILPGWYMAIVFFLLRPNDLIWN 267
Query: 329 YVFS---------------WLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFR 373
Y + W + H E L+ L N +LI
Sbjct: 268 YFVNNYLDGEQPLPFDLLYWNADSTRLPGAAHSEYLRNFYLEN------RLI---RGGLE 318
Query: 374 EGGLR-DRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTY----- 427
G D + P+ +A ++D I P +V +LL + VT+
Sbjct: 319 VSGTMVD----------LGDITCPVYNLAAEEDHIAPWSSVYLGARLLGGE-VTFVLSRS 367
Query: 428 ----KVFGEPSGPHYAHY 441
V P Y ++
Sbjct: 368 GHIAGVVNPPGNAKYQYW 385
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Length = 445 |
| >gnl|CDD|201306 pfam00561, Abhydrolase_1, alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Score = 47.1 bits (112), Expect = 5e-06
Identities = 43/235 (18%), Positives = 73/235 (31%), Gaps = 51/235 (21%)
Query: 218 WDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAI 277
DF Y +D+ +E + K+ +GHSMGG++ A ++ R+ A+
Sbjct: 18 KDFADYRFDDLAEDLEALLDALG--LDKVNLVGHSMGGLIALAYAAK-----YPDRVKAL 70
Query: 278 VTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNL 337
V + + S P+ P G LL F+ L +
Sbjct: 71 VLVGTVHPAGLSS------------------PLTPRGNLLGLL------LDNFFNRLYDS 106
Query: 338 ISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKC---- 393
+ A + + + F + K Q + +
Sbjct: 107 VEALLGRAIKQFQ-ALGRPFVSDFLK---QFELSSLIRFGETLALDGLLGYALGYDLVWD 162
Query: 394 --------NIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAH 440
++P L I GD D + PP+A E+ L P V + H A
Sbjct: 163 RSAALKDIDVPTLIIWGDDDPLVPPDASEKLAALFPN--AQLVVIDDAG--HLAQ 213
|
This catalytic domain is found in a very wide range of enzymes. Length = 226 |
| >gnl|CDD|221720 pfam12697, Abhydrolase_6, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 1e-05
Identities = 24/99 (24%), Positives = 38/99 (38%), Gaps = 6/99 (6%)
Query: 345 HPELLKKLVLNN-FCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGD 403
PE + LVL + +L+ A LR ++ + + +P+L I G+
Sbjct: 86 RPERVAGLVLISPPLRDLEELLAADAAALLAL-LRAALLDADLREALARLTVPVLVIHGE 144
Query: 404 QDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYD 442
D + PPEA + LP V P H H +
Sbjct: 145 DDPLVPPEAARRLAEALPG--AELVVL--PGAGHLPHLE 179
|
This family contains alpha/beta hydrolase enzymes of diverse specificity. Length = 187 |
| >gnl|CDD|223669 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 46.2 bits (108), Expect = 2e-05
Identities = 38/224 (16%), Positives = 69/224 (30%), Gaps = 22/224 (9%)
Query: 219 DFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIV 278
D Y + + + K++ +GHSMGG + A+ R R+ +V
Sbjct: 65 DPAGYSLSAYADDLAALLDALGLE--KVVLVGHSMGGAVALALALR-----HPDRVRGLV 117
Query: 279 TLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLI 338
+ + ++ L A A + + LG A L ++ + +
Sbjct: 118 LIGPAPPPGLLEAAL---RQPAGAAPLAALADLLLGLDAAAFAALLAALGLLAALAAAAR 174
Query: 339 SAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPIL 398
+ L F + A + LR + + +P L
Sbjct: 175 AGLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAA---------LARITVPTL 225
Query: 399 AIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYD 442
I G+ D + P E LP D + P H+ H +
Sbjct: 226 IIHGEDDPVVPAELARRLAAALPNDARLVVI---PGAGHFPHLE 266
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Length = 282 |
| >gnl|CDD|130895 TIGR01836, PHA_synth_III_C, poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.001
Identities = 68/309 (22%), Positives = 113/309 (36%), Gaps = 73/309 (23%)
Query: 190 PQLFDLQERLFSTIDDFQKQLDLIVQYDWDF----------DHYLEEDVPAAMEYIRAQS 239
P + DLQE S + ++ + DW + D Y+ + ++YI S
Sbjct: 75 PYMLDLQEDR-SLVRGLLERGQDVYLIDWGYPDRADRYLTLDDYINGYIDKCVDYICRTS 133
Query: 240 KPKDGKLLAIGHSMGGI--LLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLL 297
K LL G GG L YA L ++ +VT+ + +D+ + + L
Sbjct: 134 KLDQISLL--GICQGGTFSLCYAALY-------PDKIKNLVTMVTPVDFETPGNMLSNWA 184
Query: 298 PLADPAQAL----NVPVVPLGALLTAAYPLSSSP------PYV--FSWLNNLISAEDMMH 345
D A+ N+P G LL + L P YV L + E+ +
Sbjct: 185 RHVDIDLAVDTMGNIP----GELLNLTF-LMLKPFSLGYQKYVNLVDILEDERKVENFL- 238
Query: 346 PELLKKLVLNNFCTIPAKLILQLTTAFRE-------------GGLRDRGGKFFYKDHIHK 392
++K + F + Q AFR+ G + G K +
Sbjct: 239 --RMEKWI---FDSPD-----QAGEAFRQFVKDFYQQNGLINGEVEIGGRKV----DLKN 284
Query: 393 CNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQ 452
+PIL I ++D + PP+A + L+ + T F P G H + A ++
Sbjct: 285 IKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSF--PGG----HIGIYVSGKAQKE 338
Query: 453 VYPCIVQFL 461
V P I ++L
Sbjct: 339 VPPAIGKWL 347
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 350 |
| >gnl|CDD|216672 pfam01738, DLH, Dienelactone hydrolase family | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 0.001
Identities = 22/96 (22%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Query: 169 QIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDV 228
IRD++ L EEG +++ P L+ Q + + + + ++ + +D+
Sbjct: 29 FIRDIAARLA---EEGYVALCPDLYARQGLDPTDPREAARAMRGLL---SKRMEAVVDDL 82
Query: 229 PAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSR 264
AA+ Y+R Q K+ +G +GG L + + +R
Sbjct: 83 LAAINYLRGQPYVDTKKVGVVGFCLGGRLAFLLAAR 118
|
Length = 215 |
| >gnl|CDD|221718 pfam12695, Abhydrolase_5, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 38.5 bits (90), Expect = 0.002
Identities = 14/49 (28%), Positives = 20/49 (40%)
Query: 381 GGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKV 429
G D + K +P+L I G +D + PPE E LP +
Sbjct: 91 GDPPDALDDLAKLTVPVLIIHGTRDGVVPPEEAEALAAALPGPAELVVI 139
|
This family contains a diverse range of alpha/beta hydrolase enzymes. Length = 145 |
| >gnl|CDD|131480 TIGR02427, protocat_pcaD, 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Score = 38.9 bits (91), Expect = 0.003
Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 9/52 (17%)
Query: 370 TAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLP 421
A R+ RDR G +P L IAGDQD PPE V E L+P
Sbjct: 178 AAIRDADFRDRLGAI---------AVPTLCIAGDQDGSTPPELVREIADLVP 220
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate [Energy metabolism, Other]. Length = 251 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 468 | |||
| TIGR01838 | 532 | PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, | 99.89 | |
| PLN02824 | 294 | hydrolase, alpha/beta fold family protein | 99.85 | |
| TIGR01839 | 560 | PHA_synth_II poly(R)-hydroxyalkanoic acid synthase | 99.84 | |
| PLN02872 | 395 | triacylglycerol lipase | 99.83 | |
| PLN02965 | 255 | Probable pheophorbidase | 99.82 | |
| COG1647 | 243 | Esterase/lipase [General function prediction only] | 99.82 | |
| PLN02385 | 349 | hydrolase; alpha/beta fold family protein | 99.81 | |
| PLN02679 | 360 | hydrolase, alpha/beta fold family protein | 99.81 | |
| PHA02857 | 276 | monoglyceride lipase; Provisional | 99.81 | |
| KOG1455 | 313 | consensus Lysophospholipase [Lipid transport and m | 99.8 | |
| TIGR01836 | 350 | PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth | 99.8 | |
| TIGR02240 | 276 | PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer | 99.79 | |
| PRK00870 | 302 | haloalkane dehalogenase; Provisional | 99.79 | |
| TIGR03343 | 282 | biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die | 99.79 | |
| PLN02298 | 330 | hydrolase, alpha/beta fold family protein | 99.78 | |
| PLN02578 | 354 | hydrolase | 99.78 | |
| PRK03592 | 295 | haloalkane dehalogenase; Provisional | 99.77 | |
| COG0412 | 236 | Dienelactone hydrolase and related enzymes [Second | 99.77 | |
| PRK10749 | 330 | lysophospholipase L2; Provisional | 99.77 | |
| COG2267 | 298 | PldB Lysophospholipase [Lipid metabolism] | 99.77 | |
| PLN02652 | 395 | hydrolase; alpha/beta fold family protein | 99.76 | |
| PRK10673 | 255 | acyl-CoA esterase; Provisional | 99.74 | |
| TIGR03611 | 257 | RutD pyrimidine utilization protein D. This protei | 99.74 | |
| TIGR02427 | 251 | protocat_pcaD 3-oxoadipate enol-lactonase. Members | 99.74 | |
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 99.73 | |
| KOG2624 | 403 | consensus Triglyceride lipase-cholesterol esterase | 99.73 | |
| PRK07581 | 339 | hypothetical protein; Validated | 99.73 | |
| PRK06489 | 360 | hypothetical protein; Provisional | 99.72 | |
| PF01738 | 218 | DLH: Dienelactone hydrolase family; InterPro: IPR0 | 99.72 | |
| KOG4178 | 322 | consensus Soluble epoxide hydrolase [Lipid transpo | 99.72 | |
| PLN03087 | 481 | BODYGUARD 1 domain containing hydrolase; Provision | 99.72 | |
| TIGR03695 | 251 | menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene | 99.71 | |
| TIGR01738 | 245 | bioH putative pimeloyl-BioC--CoA transferase BioH. | 99.71 | |
| PF12697 | 228 | Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3 | 99.71 | |
| TIGR03056 | 278 | bchO_mg_che_rel putative magnesium chelatase acces | 99.71 | |
| PRK11126 | 242 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl | 99.7 | |
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 99.7 | |
| TIGR01607 | 332 | PST-A Plasmodium subtelomeric family (PST-A). Thes | 99.7 | |
| PRK03204 | 286 | haloalkane dehalogenase; Provisional | 99.69 | |
| TIGR01250 | 288 | pro_imino_pep_2 proline-specific peptidases, Bacil | 99.69 | |
| PLN03084 | 383 | alpha/beta hydrolase fold protein; Provisional | 99.68 | |
| TIGR01392 | 351 | homoserO_Ac_trn homoserine O-acetyltransferase. Th | 99.66 | |
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 99.66 | |
| KOG4409 | 365 | consensus Predicted hydrolase/acyltransferase (alp | 99.65 | |
| TIGR01849 | 406 | PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, | 99.64 | |
| PRK13604 | 307 | luxD acyl transferase; Provisional | 99.64 | |
| PLN02511 | 388 | hydrolase | 99.64 | |
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 99.64 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 99.63 | |
| PRK00175 | 379 | metX homoserine O-acetyltransferase; Provisional | 99.62 | |
| PF00326 | 213 | Peptidase_S9: Prolyl oligopeptidase family This fa | 99.62 | |
| COG3243 | 445 | PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me | 99.61 | |
| PF00561 | 230 | Abhydrolase_1: alpha/beta hydrolase fold A web pag | 99.61 | |
| PRK05077 | 414 | frsA fermentation/respiration switch protein; Revi | 99.61 | |
| PLN02894 | 402 | hydrolase, alpha/beta fold family protein | 99.61 | |
| PRK06765 | 389 | homoserine O-acetyltransferase; Provisional | 99.6 | |
| KOG1454 | 326 | consensus Predicted hydrolase/acyltransferase (alp | 99.6 | |
| PRK10985 | 324 | putative hydrolase; Provisional | 99.6 | |
| TIGR03100 | 274 | hydr1_PEP hydrolase, ortholog 1, exosortase system | 99.6 | |
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 99.58 | |
| TIGR01249 | 306 | pro_imino_pep_1 proline iminopeptidase, Neisseria- | 99.56 | |
| PRK10566 | 249 | esterase; Provisional | 99.55 | |
| KOG3043 | 242 | consensus Predicted hydrolase related to dienelact | 99.45 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.44 | |
| KOG2382 | 315 | consensus Predicted alpha/beta hydrolase [General | 99.42 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 99.39 | |
| KOG2984 | 277 | consensus Predicted hydrolase [General function pr | 99.35 | |
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 99.34 | |
| COG0429 | 345 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.34 | |
| COG4757 | 281 | Predicted alpha/beta hydrolase [General function p | 99.32 | |
| KOG1838 | 409 | consensus Alpha/beta hydrolase [General function p | 99.32 | |
| PRK11071 | 190 | esterase YqiA; Provisional | 99.26 | |
| PF05448 | 320 | AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR0 | 99.24 | |
| KOG1552 | 258 | consensus Predicted alpha/beta hydrolase [General | 99.18 | |
| PRK11460 | 232 | putative hydrolase; Provisional | 99.17 | |
| COG2021 | 368 | MET2 Homoserine acetyltransferase [Amino acid tran | 99.15 | |
| PF08840 | 213 | BAAT_C: BAAT / Acyl-CoA thioester hydrolase C term | 99.1 | |
| COG3208 | 244 | GrsT Predicted thioesterase involved in non-riboso | 99.09 | |
| PLN02442 | 283 | S-formylglutathione hydrolase | 99.08 | |
| KOG4667 | 269 | consensus Predicted esterase [Lipid transport and | 99.06 | |
| TIGR02821 | 275 | fghA_ester_D S-formylglutathione hydrolase. This m | 99.04 | |
| COG2945 | 210 | Predicted hydrolase of the alpha/beta superfamily | 99.03 | |
| TIGR01840 | 212 | esterase_phb esterase, PHB depolymerase family. Th | 99.02 | |
| COG0596 | 282 | MhpC Predicted hydrolases or acyltransferases (alp | 99.02 | |
| COG3458 | 321 | Acetyl esterase (deacetylase) [Secondary metabolit | 99.0 | |
| PLN00021 | 313 | chlorophyllase | 99.0 | |
| PF08538 | 303 | DUF1749: Protein of unknown function (DUF1749); In | 98.99 | |
| KOG4391 | 300 | consensus Predicted alpha/beta hydrolase BEM46 [Ge | 98.98 | |
| PF11339 | 581 | DUF3141: Protein of unknown function (DUF3141); In | 98.87 | |
| PF02230 | 216 | Abhydrolase_2: Phospholipase/Carboxylesterase; Int | 98.87 | |
| KOG2564 | 343 | consensus Predicted acetyltransferases and hydrola | 98.86 | |
| PRK05371 | 767 | x-prolyl-dipeptidyl aminopeptidase; Provisional | 98.84 | |
| TIGR03101 | 266 | hydr2_PEP hydrolase, ortholog 2, exosortase system | 98.84 | |
| PF03096 | 283 | Ndr: Ndr family; InterPro: IPR004142 This family c | 98.83 | |
| PRK10115 | 686 | protease 2; Provisional | 98.81 | |
| PF10230 | 266 | DUF2305: Uncharacterised conserved protein (DUF230 | 98.79 | |
| PF06500 | 411 | DUF1100: Alpha/beta hydrolase of unknown function | 98.79 | |
| TIGR00976 | 550 | /NonD putative hydrolase, CocE/NonD family. This m | 98.76 | |
| PRK10162 | 318 | acetyl esterase; Provisional | 98.74 | |
| PF06028 | 255 | DUF915: Alpha/beta hydrolase of unknown function ( | 98.65 | |
| PF07859 | 211 | Abhydrolase_3: alpha/beta hydrolase fold A web pag | 98.61 | |
| KOG2931 | 326 | consensus Differentiation-related gene 1 protein ( | 98.56 | |
| COG0400 | 207 | Predicted esterase [General function prediction on | 98.55 | |
| PF03583 | 290 | LIP: Secretory lipase ; InterPro: IPR005152 This e | 98.47 | |
| PF06821 | 171 | Ser_hydrolase: Serine hydrolase; InterPro: IPR0106 | 98.42 | |
| PF02129 | 272 | Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 fam | 98.42 | |
| PF02273 | 294 | Acyl_transf_2: Acyl transferase; InterPro: IPR0031 | 98.41 | |
| PF03403 | 379 | PAF-AH_p_II: Platelet-activating factor acetylhydr | 98.39 | |
| PF12715 | 390 | Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8 | 98.38 | |
| PF06342 | 297 | DUF1057: Alpha/beta hydrolase of unknown function | 98.34 | |
| PF12740 | 259 | Chlorophyllase2: Chlorophyllase enzyme; InterPro: | 98.32 | |
| COG3545 | 181 | Predicted esterase of the alpha/beta hydrolase fol | 98.31 | |
| PF05728 | 187 | UPF0227: Uncharacterised protein family (UPF0227); | 98.29 | |
| cd00707 | 275 | Pancreat_lipase_like Pancreatic lipase-like enzyme | 98.28 | |
| PF06057 | 192 | VirJ: Bacterial virulence protein (VirJ); InterPro | 98.27 | |
| PF10503 | 220 | Esterase_phd: Esterase PHB depolymerase | 98.27 | |
| TIGR03230 | 442 | lipo_lipase lipoprotein lipase. Members of this pr | 98.26 | |
| PF07224 | 307 | Chlorophyllase: Chlorophyllase; InterPro: IPR01082 | 98.22 | |
| KOG2100 | 755 | consensus Dipeptidyl aminopeptidase [Posttranslati | 98.21 | |
| PF00975 | 229 | Thioesterase: Thioesterase domain; InterPro: IPR00 | 98.19 | |
| PLN02733 | 440 | phosphatidylcholine-sterol O-acyltransferase | 98.18 | |
| PF03959 | 212 | FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 | 98.1 | |
| COG4188 | 365 | Predicted dienelactone hydrolase [General function | 98.1 | |
| KOG3975 | 301 | consensus Uncharacterized conserved protein [Funct | 98.01 | |
| COG4814 | 288 | Uncharacterized protein with an alpha/beta hydrola | 97.95 | |
| TIGR03502 | 792 | lipase_Pla1_cef extracellular lipase, Pla-1/cef fa | 97.91 | |
| COG0657 | 312 | Aes Esterase/lipase [Lipid metabolism] | 97.89 | |
| KOG1515 | 336 | consensus Arylacetamide deacetylase [Defense mecha | 97.87 | |
| COG3571 | 213 | Predicted hydrolase of the alpha/beta-hydrolase fo | 97.86 | |
| KOG2551 | 230 | consensus Phospholipase/carboxyhydrolase [Amino ac | 97.74 | |
| PF09752 | 348 | DUF2048: Uncharacterized conserved protein (DUF204 | 97.71 | |
| COG4553 | 415 | DepA Poly-beta-hydroxyalkanoate depolymerase [Lipi | 97.68 | |
| KOG4627 | 270 | consensus Kynurenine formamidase [Amino acid trans | 97.67 | |
| KOG2281 | 867 | consensus Dipeptidyl aminopeptidases/acylaminoacyl | 97.65 | |
| PF07819 | 225 | PGAP1: PGAP1-like protein; InterPro: IPR012908 The | 97.62 | |
| PF10142 | 367 | PhoPQ_related: PhoPQ-activated pathogenicity-relat | 97.47 | |
| KOG3847 | 399 | consensus Phospholipase A2 (platelet-activating fa | 97.45 | |
| PF05705 | 240 | DUF829: Eukaryotic protein of unknown function (DU | 97.32 | |
| COG4099 | 387 | Predicted peptidase [General function prediction o | 97.26 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 97.22 | |
| PF02450 | 389 | LCAT: Lecithin:cholesterol acyltransferase; InterP | 97.21 | |
| COG4782 | 377 | Uncharacterized protein conserved in bacteria [Fun | 97.19 | |
| KOG2112 | 206 | consensus Lysophospholipase [Lipid transport and m | 97.16 | |
| COG2936 | 563 | Predicted acyl esterases [General function predict | 97.11 | |
| KOG3253 | 784 | consensus Predicted alpha/beta hydrolase [General | 97.09 | |
| KOG3101 | 283 | consensus Esterase D [General function prediction | 97.03 | |
| PF05990 | 233 | DUF900: Alpha/beta hydrolase of unknown function ( | 96.94 | |
| PRK04940 | 180 | hypothetical protein; Provisional | 96.92 | |
| PF01674 | 219 | Lipase_2: Lipase (class 2); InterPro: IPR002918 Li | 96.9 | |
| PF08386 | 103 | Abhydrolase_4: TAP-like protein; InterPro: IPR0135 | 96.87 | |
| KOG3724 | 973 | consensus Negative regulator of COPII vesicle form | 96.77 | |
| KOG4840 | 299 | consensus Predicted hydrolases or acyltransferases | 96.76 | |
| COG3319 | 257 | Thioesterase domains of type I polyketide synthase | 96.58 | |
| cd00741 | 153 | Lipase Lipase. Lipases are esterases that can hydr | 96.55 | |
| smart00824 | 212 | PKS_TE Thioesterase. Peptide synthetases are invol | 96.53 | |
| PF00151 | 331 | Lipase: Lipase; InterPro: IPR013818 Triglyceride l | 96.47 | |
| PF07167 | 172 | PhaC_N: Poly-beta-hydroxybutyrate polymerase (PhaC | 96.46 | |
| COG1505 | 648 | Serine proteases of the peptidase family S9A [Amin | 96.38 | |
| PTZ00472 | 462 | serine carboxypeptidase (CBP1); Provisional | 96.28 | |
| KOG2369 | 473 | consensus Lecithin:cholesterol acyltransferase (LC | 96.22 | |
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 96.21 | |
| PLN02517 | 642 | phosphatidylcholine-sterol O-acyltransferase | 96.17 | |
| COG3509 | 312 | LpqC Poly(3-hydroxybutyrate) depolymerase [Seconda | 96.07 | |
| PF12048 | 310 | DUF3530: Protein of unknown function (DUF3530); In | 95.87 | |
| PF00756 | 251 | Esterase: Putative esterase; InterPro: IPR000801 T | 95.83 | |
| PF07082 | 250 | DUF1350: Protein of unknown function (DUF1350); In | 95.78 | |
| PF01764 | 140 | Lipase_3: Lipase (class 3); InterPro: IPR002921 Tr | 95.75 | |
| PLN02633 | 314 | palmitoyl protein thioesterase family protein | 95.68 | |
| PF04301 | 213 | DUF452: Protein of unknown function (DUF452); Inte | 95.59 | |
| KOG1551 | 371 | consensus Uncharacterized conserved protein [Funct | 95.55 | |
| PF05677 | 365 | DUF818: Chlamydia CHLPS protein (DUF818); InterPro | 95.45 | |
| PRK10439 | 411 | enterobactin/ferric enterobactin esterase; Provisi | 95.42 | |
| KOG2565 | 469 | consensus Predicted hydrolases or acyltransferases | 95.39 | |
| cd00519 | 229 | Lipase_3 Lipase (class 3). Lipases are esterases t | 95.1 | |
| PF11187 | 224 | DUF2974: Protein of unknown function (DUF2974); In | 95.09 | |
| KOG1553 | 517 | consensus Predicted alpha/beta hydrolase BAT5 [Gen | 95.05 | |
| PF06850 | 202 | PHB_depo_C: PHB de-polymerase C-terminus; InterPro | 94.95 | |
| PLN02606 | 306 | palmitoyl-protein thioesterase | 94.89 | |
| COG1075 | 336 | LipA Predicted acetyltransferases and hydrolases w | 94.67 | |
| COG1073 | 299 | Hydrolases of the alpha/beta superfamily [General | 94.62 | |
| COG0627 | 316 | Predicted esterase [General function prediction on | 94.59 | |
| KOG2237 | 712 | consensus Predicted serine protease [Posttranslati | 94.38 | |
| PF12146 | 79 | Hydrolase_4: Putative lysophospholipase; InterPro: | 93.96 | |
| PF05057 | 217 | DUF676: Putative serine esterase (DUF676); InterPr | 93.82 | |
| COG2819 | 264 | Predicted hydrolase of the alpha/beta superfamily | 93.73 | |
| PF06259 | 177 | Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR | 93.45 | |
| PF11288 | 207 | DUF3089: Protein of unknown function (DUF3089); In | 93.32 | |
| PLN02408 | 365 | phospholipase A1 | 93.3 | |
| PF01083 | 179 | Cutinase: Cutinase; InterPro: IPR000675 Aerial pla | 93.09 | |
| PLN02162 | 475 | triacylglycerol lipase | 92.95 | |
| PLN02454 | 414 | triacylglycerol lipase | 92.84 | |
| PLN00413 | 479 | triacylglycerol lipase | 92.25 | |
| KOG2183 | 492 | consensus Prolylcarboxypeptidase (angiotensinase C | 91.59 | |
| PLN02571 | 413 | triacylglycerol lipase | 91.48 | |
| PLN02802 | 509 | triacylglycerol lipase | 91.11 | |
| PLN02310 | 405 | triacylglycerol lipase | 91.02 | |
| PF05577 | 434 | Peptidase_S28: Serine carboxypeptidase S28; InterP | 90.61 | |
| COG3946 | 456 | VirJ Type IV secretory pathway, VirJ component [In | 90.09 | |
| PLN02324 | 415 | triacylglycerol lipase | 89.84 | |
| PLN02847 | 633 | triacylglycerol lipase | 89.6 | |
| KOG2541 | 296 | consensus Palmitoyl protein thioesterase [Lipid tr | 89.56 | |
| COG4287 | 507 | PqaA PhoPQ-activated pathogenicity-related protein | 89.47 | |
| KOG2521 | 350 | consensus Uncharacterized conserved protein [Funct | 89.35 | |
| PLN03037 | 525 | lipase class 3 family protein; Provisional | 88.97 | |
| PLN02934 | 515 | triacylglycerol lipase | 88.76 | |
| PF05277 | 345 | DUF726: Protein of unknown function (DUF726); Inte | 88.6 | |
| PLN02761 | 527 | lipase class 3 family protein | 88.35 | |
| PF11144 | 403 | DUF2920: Protein of unknown function (DUF2920); In | 88.29 | |
| cd00312 | 493 | Esterase_lipase Esterases and lipases (includes fu | 88.14 | |
| PLN02753 | 531 | triacylglycerol lipase | 87.09 | |
| PF02089 | 279 | Palm_thioest: Palmitoyl protein thioesterase; Inte | 86.89 | |
| PF10340 | 374 | DUF2424: Protein of unknown function (DUF2424); In | 86.25 | |
| PLN02719 | 518 | triacylglycerol lipase | 86.1 | |
| COG2272 | 491 | PnbA Carboxylesterase type B [Lipid metabolism] | 83.02 | |
| PF00135 | 535 | COesterase: Carboxylesterase family The prints ent | 82.46 | |
| KOG4569 | 336 | consensus Predicted lipase [Lipid transport and me | 81.77 |
| >TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.3e-21 Score=201.67 Aligned_cols=328 Identities=18% Similarity=0.247 Sum_probs=219.6
Q ss_pred cCCCcccccccccccccchhhHHHHH-------HHHHHHHHhhhhcchhhhhhhhhh--hhhHhhhhcc---ccCchhhh
Q 012210 78 ISPVKKEDDLTRLATVWDESKLVTKL-------TETFMSLSERLSGFLSENQSKIMS--AKLFDQISKL---LEDSQLSE 145 (468)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~---~~~~~~~~ 145 (468)
+.|.++||||.+. .|.+++++..+ ++.++++.+.++|.....+.+..| +++.|+++++ .+||.+..
T Consensus 39 ~~p~~~d~RF~~~--~W~~~~~~~~~~q~yl~~~~~~~~~~~~~~g~~~~~~~~~~f~~~q~~~a~sPsNf~~tNP~~~~ 116 (532)
T TIGR01838 39 ADPEPGDRRFASP--AWSSHPFFDFLKQSYLLNSSWLLELVDAVEGLDPKTRRRLEFFTRQLINAMAPSNFLATNPEALR 116 (532)
T ss_pred CCCCCCCCCCCCc--hhccChHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHhCCcccccCCHHHHH
Confidence 4578899999998 89999999987 667789999999999999999988 9999999999 88999988
Q ss_pred hhHHh-----hhcccccccc--------------------cccccc----------------------------------
Q 012210 146 GFNEI-----RGKLSSLLER--------------------RQSSAI---------------------------------- 166 (468)
Q Consensus 146 ~~~~~-----~~~~~~ll~~--------------------~~~~G~---------------------------------- 166 (468)
++.+- ...+..+++. ..+.+.
T Consensus 117 ~~~~t~g~~l~~G~~~~~~D~~~~~~~~~i~~~~~~~f~vg~~~a~Tpg~VV~~~~~~eLi~Y~P~t~~~~~~PlLiVp~ 196 (532)
T TIGR01838 117 LTVETQGESLVRGMENLAEDLERGGGDLKIRQTDSSAFEVGRNLATTPGAVVFENELFQLIQYEPTTETVHKTPLLIVPP 196 (532)
T ss_pred HHHHcCChhHHHHHHHHHHHHHhcCCCCCCCCCCccceeeCCCCCCCCCeEEEECCcEEEEEeCCCCCcCCCCcEEEECc
Confidence 88543 2222222221 011111
Q ss_pred ---ccch------hhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHh
Q 012210 167 ---AIQI------RDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRA 237 (468)
Q Consensus 167 ---~~~i------~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~ 237 (468)
..+| +.+++.|+ .+||+|+++|+.+++.. ..++++++|+.+++.++++++..
T Consensus 197 ~i~k~yilDL~p~~Slv~~L~---~qGf~V~~iDwrgpg~s----------------~~~~~~ddY~~~~i~~al~~v~~ 257 (532)
T TIGR01838 197 WINKYYILDLRPQNSLVRWLV---EQGHTVFVISWRNPDAS----------------QADKTFDDYIRDGVIAALEVVEA 257 (532)
T ss_pred ccccceeeecccchHHHHHHH---HCCcEEEEEECCCCCcc----------------cccCChhhhHHHHHHHHHHHHHH
Confidence 1222 35667777 78888888888776431 11234668876789999999998
Q ss_pred hcCCCCCcEEEEEEehhHHHHHH----HHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCch---hhhcCCCC
Q 012210 238 QSKPKDGKLLAIGHSMGGILLYA----MLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADP---AQALNVPV 310 (468)
Q Consensus 238 ~~~~~~~~v~lvGhS~GG~ia~~----~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 310 (468)
..+.. +++++||||||.++.. +++.+ .+++|+++|+++++.++... ..+..+...... .......+
T Consensus 258 ~~g~~--kv~lvG~cmGGtl~a~ala~~aa~~----~~~rv~slvll~t~~Df~~~-G~l~~f~~~~~~~~~e~~~~~~G 330 (532)
T TIGR01838 258 ITGEK--QVNCVGYCIGGTLLSTALAYLAARG----DDKRIKSATFFTTLLDFSDP-GELGVFVDEEIVAGIERQNGGGG 330 (532)
T ss_pred hcCCC--CeEEEEECcCcHHHHHHHHHHHHhC----CCCccceEEEEecCcCCCCc-chhhhhcCchhHHHHHHHHHhcC
Confidence 87776 9999999999998633 33331 15689999999999998754 333333211111 11111222
Q ss_pred cchHhHHHHhcCCCCCchh-HHHHHHHhhhccccCCHHHHHHHHhh-ccCCCcHHHHHHHHHH-HhcCcccccCCcc---
Q 012210 311 VPLGALLTAAYPLSSSPPY-VFSWLNNLISAEDMMHPELLKKLVLN-NFCTIPAKLILQLTTA-FREGGLRDRGGKF--- 384 (468)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--- 384 (468)
..-+..+...|.+...... ...++..++...... .+.-++.+ .....|.....++.+. +..+.+.. +.+
T Consensus 331 ~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~---~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~--G~~~v~ 405 (532)
T TIGR01838 331 YLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPV---PFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTT--GGLEVC 405 (532)
T ss_pred CCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCcc---chhHHHHhccCccchHHHHHHHHHHHHhcCCCcC--CeeEEC
Confidence 2334455555655544333 223343333332211 23333333 2457788888887744 55555542 332
Q ss_pred ccccccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCccc
Q 012210 385 FYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYD 442 (468)
Q Consensus 385 ~~~~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e 442 (468)
+....+.+|++|+|+|+|++|.++|++.++.+.+.+++. +..++ +++||..|++
T Consensus 406 g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~~~--~~~vL--~~sGHi~~ie 459 (532)
T TIGR01838 406 GVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALLGGP--KTFVL--GESGHIAGVV 459 (532)
T ss_pred CEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCCCC--EEEEE--CCCCCchHhh
Confidence 234589999999999999999999999999999999975 55566 8899998876
|
This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >PLN02824 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.3e-20 Score=182.76 Aligned_cols=255 Identities=15% Similarity=0.140 Sum_probs=144.8
Q ss_pred cccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCC
Q 012210 162 QSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKP 241 (468)
Q Consensus 162 ~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~ 241 (468)
++.+-...++.+...|+ . .|+|++||+.|++..-..... . ......|++++++ +|+.++++.+..
T Consensus 37 G~~~~~~~w~~~~~~L~---~-~~~vi~~DlpG~G~S~~~~~~-----~-~~~~~~~~~~~~a-~~l~~~l~~l~~---- 101 (294)
T PLN02824 37 GFGGNADHWRKNTPVLA---K-SHRVYAIDLLGYGYSDKPNPR-----S-APPNSFYTFETWG-EQLNDFCSDVVG---- 101 (294)
T ss_pred CCCCChhHHHHHHHHHH---h-CCeEEEEcCCCCCCCCCCccc-----c-ccccccCCHHHHH-HHHHHHHHHhcC----
Confidence 33333344455555555 4 579999999999763111000 0 0011246788887 999999988754
Q ss_pred CCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCch---hhHHhhcccCchhhhcCCCCcchHhHHH
Q 012210 242 KDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSK---STLKLLLPLADPAQALNVPVVPLGALLT 318 (468)
Q Consensus 242 ~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (468)
++++++||||||++++.+|.++ |++|+++|+++++....... .....+.. ......... ... .
T Consensus 102 --~~~~lvGhS~Gg~va~~~a~~~-----p~~v~~lili~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~---~ 167 (294)
T PLN02824 102 --DPAFVICNSVGGVVGLQAAVDA-----PELVRGVMLINISLRGLHIKKQPWLGRPFIK--AFQNLLRET--AVG---K 167 (294)
T ss_pred --CCeEEEEeCHHHHHHHHHHHhC-----hhheeEEEEECCCcccccccccchhhhHHHH--HHHHHHhch--hHH---H
Confidence 2999999999999999999998 89999999998754221100 00000000 000000000 000 0
Q ss_pred HhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEE
Q 012210 319 AAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPIL 398 (468)
Q Consensus 319 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvL 398 (468)
.++........+...+...+........+.+..+...... + .....+...+.. .........+.+|++|+|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~------~~~~~~~~~l~~i~~P~l 238 (294)
T PLN02824 168 AFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLE--P-GAVDVFLDFISY------SGGPLPEELLPAVKCPVL 238 (294)
T ss_pred HHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCC--c-hHHHHHHHHhcc------ccccchHHHHhhcCCCeE
Confidence 0000000011111111111111112233333322211111 1 111111111110 011112345788999999
Q ss_pred EEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 399 AIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 399 iI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
+|+|++|.++|.+.++.+.+.+++. +++++ +++||+.|.+ .|++|.+.|.+||+++
T Consensus 239 vi~G~~D~~~~~~~~~~~~~~~~~~--~~~~i--~~~gH~~~~e------~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 239 IAWGEKDPWEPVELGRAYANFDAVE--DFIVL--PGVGHCPQDE------APELVNPLIESFVARH 294 (294)
T ss_pred EEEecCCCCCChHHHHHHHhcCCcc--ceEEe--CCCCCChhhh------CHHHHHHHHHHHHhcC
Confidence 9999999999999999988888766 77887 8999999998 9999999999999865
|
|
| >TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.5e-19 Score=184.58 Aligned_cols=340 Identities=16% Similarity=0.225 Sum_probs=214.7
Q ss_pred cCCCcccccccccccccchhhHHHHH-------HHHHHHHHhhhhcchhhhhhhhhh--hhhHhhhhcc--ccCchhhhh
Q 012210 78 ISPVKKEDDLTRLATVWDESKLVTKL-------TETFMSLSERLSGFLSENQSKIMS--AKLFDQISKL--LEDSQLSEG 146 (468)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~ 146 (468)
+.|.+.|+||.+. .|++++++..+ ++.++++.+.. |.....+.+..| .++.|+++++ +.||.+..+
T Consensus 70 ~~p~~~D~RF~d~--~W~~~p~~~~~~q~yl~~~~~~~~~~~~~-~l~~~~~~~~~f~~~q~~da~sPsN~~tNP~~~~~ 146 (560)
T TIGR01839 70 LQPNPDDRRFNDP--AWSNNPFYRRYLQAYLAWQKQLQDWIGES-DLDPDDRARAQFLINLMTDAMAPSNSLSNPLAVKE 146 (560)
T ss_pred CCCCCCCCCCCCc--hhhhhHHHHHHHHHHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHhhCCcCcccCHHHHHH
Confidence 5577899999998 89999999987 44556666654 677777777777 8999999998 889999888
Q ss_pred hHHh-----hhccccccccc-cccccccchhhHHHHHHhh--hhcCceEeccCc--------------------------
Q 012210 147 FNEI-----RGKLSSLLERR-QSSAIAIQIRDLSQNLVNM--IEEGQLSVSPQL-------------------------- 192 (468)
Q Consensus 147 ~~~~-----~~~~~~ll~~~-~~~G~~~~i~~~a~~la~~--l~~Gy~viapdl-------------------------- 192 (468)
+.+- ...+..|++.- .+.|...+...-+..+-.- ...|-.|+.-++
T Consensus 147 ~~~t~G~sl~~G~~~~~~Dl~~~~g~~~~~d~~aF~vG~~~a~TPg~VV~~n~l~eLiqY~P~te~v~~~PLLIVPp~IN 226 (560)
T TIGR01839 147 LFNTGGKSLLDGVSHLLKDLVHNGGMPSQVNMDAFEVGKNLATTEGAVVFRNEVLELIQYKPITEQQHARPLLVVPPQIN 226 (560)
T ss_pred HHHcCCHHHHHHHHHHHHHHHhcCCCCCCCChhhcccCCCCCCCCCceeEECCceEEEEeCCCCCCcCCCcEEEechhhh
Confidence 8554 33333344322 1222221111111111000 011222222221
Q ss_pred ----cccccCCccchHHHhhcccceEeecC----------ChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHH
Q 012210 193 ----FDLQERLFSTIDDFQKQLDLIVQYDW----------DFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILL 258 (468)
Q Consensus 193 ----~~~~~~~~~~~~~l~~~~~~~~~~D~----------~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia 258 (468)
++. .+..+.++++.++|+.+...|| ++++|+ +.+.++++.++...+.. +++++||||||.++
T Consensus 227 K~YIlDL-~P~~SlVr~lv~qG~~VflIsW~nP~~~~r~~~ldDYv-~~i~~Ald~V~~~tG~~--~vnl~GyC~GGtl~ 302 (560)
T TIGR01839 227 KFYIFDL-SPEKSFVQYCLKNQLQVFIISWRNPDKAHREWGLSTYV-DALKEAVDAVRAITGSR--DLNLLGACAGGLTC 302 (560)
T ss_pred hhheeec-CCcchHHHHHHHcCCeEEEEeCCCCChhhcCCCHHHHH-HHHHHHHHHHHHhcCCC--CeeEEEECcchHHH
Confidence 111 1124556677777777777776 679998 79999999999998886 99999999999999
Q ss_pred HH----HHHhcCCCCCc-ccccceeEEccccccCCchhhHHhhcccCch---hhhcCCCCcchHhHHHHhcCCCCCchhH
Q 012210 259 YA----MLSRCGFEGRE-SRLAAIVTLASSLDYTSSKSTLKLLLPLADP---AQALNVPVVPLGALLTAAYPLSSSPPYV 330 (468)
Q Consensus 259 ~~----~a~~~~~~~~p-~~V~~lVllap~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (468)
.. |++++ + .+|++++++++++++.... .+..+...... .......+..-+..+...|.+......+
T Consensus 303 a~~~a~~aA~~-----~~~~V~sltllatplDf~~~g-~l~~f~~e~~~~~~e~~~~~~G~lpg~~ma~~F~~LrP~dli 376 (560)
T TIGR01839 303 AALVGHLQALG-----QLRKVNSLTYLVSLLDSTMES-PAALFADEQTLEAAKRRSYQAGVLDGSEMAKVFAWMRPNDLI 376 (560)
T ss_pred HHHHHHHHhcC-----CCCceeeEEeeecccccCCCC-cchhccChHHHHHHHHHHHhcCCcCHHHHHHHHHhcCchhhh
Confidence 97 56554 5 4799999999999987532 12222111001 0111222334456666666655544444
Q ss_pred HHHHH-HhhhccccCCHHHHHHHHh-hccCCCcHHHHHHHHHHHhcCcccccCCcc---ccccccCccCccEEEEecCCC
Q 012210 331 FSWLN-NLISAEDMMHPELLKKLVL-NNFCTIPAKLILQLTTAFREGGLRDRGGKF---FYKDHIHKCNIPILAIAGDQD 405 (468)
Q Consensus 331 ~~~l~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~I~vPvLiI~G~~D 405 (468)
..++. .++... .+..++-+.. ....+.|.....++...+..+.+... +.+ .-..++.+|+||++++.|.+|
T Consensus 377 w~y~v~~yllg~---~p~~fdll~Wn~D~t~lPg~~~~e~l~ly~~N~L~~p-G~l~v~G~~idL~~I~~Pvl~va~~~D 452 (560)
T TIGR01839 377 WNYWVNNYLLGN---EPPAFDILYWNNDTTRLPAAFHGDLLDMFKSNPLTRP-DALEVCGTPIDLKKVKCDSFSVAGTND 452 (560)
T ss_pred HHHHHHHhhcCC---CcchhhHHHHhCcCccchHHHHHHHHHHHhcCCCCCC-CCEEECCEEechhcCCCCeEEEecCcC
Confidence 33332 221111 1222222222 23457788888888887777666531 222 124489999999999999999
Q ss_pred CcCCHHHHHHHHHhCCCCceeEEEecCCCCCCC
Q 012210 406 LICPPEAVEETVKLLPEDLVTYKVFGEPSGPHY 438 (468)
Q Consensus 406 ~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~ 438 (468)
.|+|+++++.+.+.+.+ +++++.. .+||.
T Consensus 453 HIvPw~s~~~~~~l~gs-~~~fvl~---~gGHI 481 (560)
T TIGR01839 453 HITPWDAVYRSALLLGG-KRRFVLS---NSGHI 481 (560)
T ss_pred CcCCHHHHHHHHHHcCC-CeEEEec---CCCcc
Confidence 99999999999999987 5777775 45553
|
This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >PLN02872 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.8e-19 Score=182.25 Aligned_cols=283 Identities=16% Similarity=0.167 Sum_probs=180.5
Q ss_pred ccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCC
Q 012210 165 AIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDG 244 (468)
Q Consensus 165 G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~ 244 (468)
.++...+.++..|+ .+||+|+++|++|++..+..... .......|++++++++.+|+.++++++....+ .
T Consensus 91 ~~~~~~~sla~~La---~~GydV~l~n~RG~~~s~gh~~~----~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~---~ 160 (395)
T PLN02872 91 FLNSPEQSLGFILA---DHGFDVWVGNVRGTRWSYGHVTL----SEKDKEFWDWSWQELALYDLAEMIHYVYSITN---S 160 (395)
T ss_pred eecCcccchHHHHH---hCCCCcccccccccccccCCCCC----CccchhccCCcHHHHHHHHHHHHHHHHHhccC---C
Confidence 33444567888898 89999999999987532221110 00111236889999987899999999986533 3
Q ss_pred cEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchh---hhcCCC-CcchHhHHHHh
Q 012210 245 KLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPA---QALNVP-VVPLGALLTAA 320 (468)
Q Consensus 245 ~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~ 320 (468)
++++|||||||.+++.++.+ + ....+|+++++++|..........+.......... ..++.. ..+....+..+
T Consensus 161 ~v~~VGhS~Gg~~~~~~~~~-p--~~~~~v~~~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 237 (395)
T PLN02872 161 KIFIVGHSQGTIMSLAALTQ-P--NVVEMVEAAALLCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKL 237 (395)
T ss_pred ceEEEEECHHHHHHHHHhhC-h--HHHHHHHHHHHhcchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHH
Confidence 99999999999999966643 0 00236899999998776544332222111000000 011111 11111111111
Q ss_pred cC-CCCCchhHHHH-HHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCc-----ccc------c
Q 012210 321 YP-LSSSPPYVFSW-LNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGK-----FFY------K 387 (468)
Q Consensus 321 ~~-~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~------~ 387 (468)
.. .+.. ...+.. +..+.+.....+...+..++......+..+.+.+|.+.++.+.|+.++-. ..| .
T Consensus 238 ~~~~C~~-~~~c~~~~~~~~g~~~~~n~~~~~~~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~ 316 (395)
T PLN02872 238 LDSICEG-HMDCNDLLTSITGTNCCFNASRIDYYLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPA 316 (395)
T ss_pred HHHHccC-chhHHHHHHHHhCCCcccchhhhhHHHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCC
Confidence 11 1111 111222 12222222234555666666666778888999999999999988876521 112 1
Q ss_pred cccCcc--CccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 388 DHIHKC--NIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 388 ~~l~~I--~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
-.+++| ++|+++++|++|.+++++.++++.+.+++. .+++.+ +++.|.+++++.++++.|++.|++||+++.
T Consensus 317 Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~-~~l~~l-----~~~gH~dfi~~~eape~V~~~Il~fL~~~~ 390 (395)
T PLN02872 317 FDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPSK-PELLYL-----ENYGHIDFLLSTSAKEDVYNHMIQFFRSLG 390 (395)
T ss_pred cCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCCc-cEEEEc-----CCCCCHHHHhCcchHHHHHHHHHHHHHHhh
Confidence 157778 589999999999999999999999999973 356665 567777777888899999999999999875
Q ss_pred CC
Q 012210 466 SV 467 (468)
Q Consensus 466 ~~ 467 (468)
..
T Consensus 391 ~~ 392 (395)
T PLN02872 391 KS 392 (395)
T ss_pred hc
Confidence 43
|
|
| >PLN02965 Probable pheophorbidase | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.1e-18 Score=168.54 Aligned_cols=242 Identities=18% Similarity=0.204 Sum_probs=141.1
Q ss_pred ccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcC
Q 012210 161 RQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSK 240 (468)
Q Consensus 161 ~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~ 240 (468)
|++.+-...++.+...|+ ..||+|+++|+.|++..-. . ....+++++++ +|+.++++.+...
T Consensus 10 HG~~~~~~~w~~~~~~L~---~~~~~via~Dl~G~G~S~~----------~--~~~~~~~~~~a-~dl~~~l~~l~~~-- 71 (255)
T PLN02965 10 HGASHGAWCWYKLATLLD---AAGFKSTCVDLTGAGISLT----------D--SNTVSSSDQYN-RPLFALLSDLPPD-- 71 (255)
T ss_pred CCCCCCcCcHHHHHHHHh---hCCceEEEecCCcCCCCCC----------C--ccccCCHHHHH-HHHHHHHHhcCCC--
Confidence 333333344566666776 7899999999999975210 0 01245678887 9999999886421
Q ss_pred CCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCc--hhhHHhhcccCchhhhcCCCCcchHhHHH
Q 012210 241 PKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSS--KSTLKLLLPLADPAQALNVPVVPLGALLT 318 (468)
Q Consensus 241 ~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (468)
.+++++||||||.+++.+|.++ |++|+++|++++....... ............ ..+.
T Consensus 72 ---~~~~lvGhSmGG~ia~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~ 130 (255)
T PLN02965 72 ---HKVILVGHSIGGGSVTEALCKF-----TDKISMAIYVAAAMVKPGSIISPRLKNVMEGTE-------------KIWD 130 (255)
T ss_pred ---CCEEEEecCcchHHHHHHHHhC-----chheeEEEEEccccCCCCCCccHHHHhhhhccc-------------ccee
Confidence 2899999999999999999988 8999999999875321110 000000000000 0000
Q ss_pred Hhc-CCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccE
Q 012210 319 AAY-PLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPI 397 (468)
Q Consensus 319 ~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPv 397 (468)
..+ .....+.. .+ ....+.....+.. ..+..........+............++...+.++++|+
T Consensus 131 ~~~~~~~~~~~~--~~---------~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~ 196 (255)
T PLN02965 131 YTFGEGPDKPPT--GI---------MMKPEFVRHYYYN---QSPLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPR 196 (255)
T ss_pred eeeccCCCCCcc--hh---------hcCHHHHHHHHhc---CCCHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCE
Confidence 000 00000000 00 0000000000000 000000000001111000000000011223456799999
Q ss_pred EEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 398 LAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 398 LiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
|+|+|++|.++|+...+.+.+.++++ +++++ +++||+.|.+ .|++|.+.|.+|++...
T Consensus 197 lvi~g~~D~~~~~~~~~~~~~~~~~a--~~~~i--~~~GH~~~~e------~p~~v~~~l~~~~~~~~ 254 (255)
T PLN02965 197 VYIKTAKDNLFDPVRQDVMVENWPPA--QTYVL--EDSDHSAFFS------VPTTLFQYLLQAVSSLQ 254 (255)
T ss_pred EEEEcCCCCCCCHHHHHHHHHhCCcc--eEEEe--cCCCCchhhc------CHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999987 77777 8999999998 99999999999998654
|
|
| >COG1647 Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.1e-18 Score=156.06 Aligned_cols=228 Identities=19% Similarity=0.255 Sum_probs=171.9
Q ss_pred ccccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHH
Q 012210 155 SSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEY 234 (468)
Q Consensus 155 ~~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~ 234 (468)
..+|-.+.+.|-+..++.+++.|. ++||.|.||.+.||+. ..++|. ..+..+|. +|+.+..++
T Consensus 16 ~AVLllHGFTGt~~Dvr~Lgr~L~---e~GyTv~aP~ypGHG~----~~e~fl---------~t~~~DW~-~~v~d~Y~~ 78 (243)
T COG1647 16 RAVLLLHGFTGTPRDVRMLGRYLN---ENGYTVYAPRYPGHGT----LPEDFL---------KTTPRDWW-EDVEDGYRD 78 (243)
T ss_pred EEEEEEeccCCCcHHHHHHHHHHH---HCCceEecCCCCCCCC----CHHHHh---------cCCHHHHH-HHHHHHHHH
Confidence 667777999999999999999999 9999999999999976 333333 23567886 999999999
Q ss_pred HHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchH
Q 012210 235 IRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLG 314 (468)
Q Consensus 235 l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (468)
|+.. + .+.|.++|.||||.+++.+|.++ | ++++|.++++.........+..++
T Consensus 79 L~~~-g--y~eI~v~GlSmGGv~alkla~~~-----p--~K~iv~m~a~~~~k~~~~iie~~l----------------- 131 (243)
T COG1647 79 LKEA-G--YDEIAVVGLSMGGVFALKLAYHY-----P--PKKIVPMCAPVNVKSWRIIIEGLL----------------- 131 (243)
T ss_pred HHHc-C--CCeEEEEeecchhHHHHHHHhhC-----C--ccceeeecCCcccccchhhhHHHH-----------------
Confidence 9854 2 24899999999999999999986 4 899999999887655443332221
Q ss_pred hHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccC
Q 012210 315 ALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCN 394 (468)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~ 394 (468)
.+...+ ......+.+.+++.+... ...+.....++...+.. .+..+..|.
T Consensus 132 -----------------~y~~~~-kk~e~k~~e~~~~e~~~~-~~~~~~~~~~~~~~i~~-----------~~~~~~~I~ 181 (243)
T COG1647 132 -----------------EYFRNA-KKYEGKDQEQIDKEMKSY-KDTPMTTTAQLKKLIKD-----------ARRSLDKIY 181 (243)
T ss_pred -----------------HHHHHh-hhccCCCHHHHHHHHHHh-hcchHHHHHHHHHHHHH-----------HHhhhhhcc
Confidence 111111 111122455555544333 33345555555544331 346789999
Q ss_pred ccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 395 IPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 395 vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
.|++++.|.+|..+|.+.+..+++.+...++++.++ ++.||..-.| .+++++.+.|..||+.
T Consensus 182 ~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~--e~SgHVIt~D-----~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 182 SPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWL--EGSGHVITLD-----KERDQVEEDVITFLEK 243 (243)
T ss_pred cchhheecccCCCCCHHHHHHHHHhccCCcceeEEE--ccCCceeecc-----hhHHHHHHHHHHHhhC
Confidence 999999999999999999999999998888999999 8888887777 5889999999999974
|
|
| >PLN02385 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.5e-19 Score=179.20 Aligned_cols=236 Identities=12% Similarity=0.140 Sum_probs=141.9
Q ss_pred hhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEE
Q 012210 170 IRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAI 249 (468)
Q Consensus 170 i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lv 249 (468)
++.++..|+ .+||+|+++|+.|++..- +. ..+..++++++ +|+.++++.+.........+++++
T Consensus 104 ~~~~~~~l~---~~g~~v~~~D~~G~G~S~----------~~--~~~~~~~~~~~-~dv~~~l~~l~~~~~~~~~~~~Lv 167 (349)
T PLN02385 104 FEGIARKIA---SSGYGVFAMDYPGFGLSE----------GL--HGYIPSFDDLV-DDVIEHYSKIKGNPEFRGLPSFLF 167 (349)
T ss_pred HHHHHHHHH---hCCCEEEEecCCCCCCCC----------CC--CCCcCCHHHHH-HHHHHHHHHHHhccccCCCCEEEE
Confidence 466777787 789999999999997521 00 01123677876 999999998876432223479999
Q ss_pred EEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCC---CC
Q 012210 250 GHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLS---SS 326 (468)
Q Consensus 250 GhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 326 (468)
||||||++++.++.++ |.+|.++|+++|.............+.. ....+....+.. ..
T Consensus 168 GhSmGG~val~~a~~~-----p~~v~glVLi~p~~~~~~~~~~~~~~~~--------------~~~~~~~~~p~~~~~~~ 228 (349)
T PLN02385 168 GQSMGGAVALKVHLKQ-----PNAWDGAILVAPMCKIADDVVPPPLVLQ--------------ILILLANLLPKAKLVPQ 228 (349)
T ss_pred EeccchHHHHHHHHhC-----cchhhheeEecccccccccccCchHHHH--------------HHHHHHHHCCCceecCC
Confidence 9999999999999987 8899999999986543221000000000 000011111100 00
Q ss_pred chhHHHHHHHhhhccccCCHHHHHHHHhhccC-CCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecCCC
Q 012210 327 PPYVFSWLNNLISAEDMMHPELLKKLVLNNFC-TIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQD 405 (468)
Q Consensus 327 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~D 405 (468)
..+.... +.. ........+...... .........+.... .+....+.+|++|+|+|+|++|
T Consensus 229 ~~~~~~~----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~~~~~~l~~i~~P~Lii~G~~D 290 (349)
T PLN02385 229 KDLAELA----FRD---LKKRKMAEYNVIAYKDKPRLRTAVELLRTT-----------QEIEMQLEEVSLPLLILHGEAD 290 (349)
T ss_pred Ccccccc----ccC---HHHHHHhhcCcceeCCCcchHHHHHHHHHH-----------HHHHHhcccCCCCEEEEEeCCC
Confidence 0000000 000 000000000000000 00111111111110 1123467889999999999999
Q ss_pred CcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhh----HHHHHHHHHhhccC
Q 012210 406 LICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQ----VYPCIVQFLGRYDS 466 (468)
Q Consensus 406 ~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~----v~~~I~~FL~~~~~ 466 (468)
.++|++.++.+++.++..+++++++ |+++|+.+.+ +|++ |...|.+||+++..
T Consensus 291 ~vv~~~~~~~l~~~~~~~~~~l~~i--~~~gH~l~~e------~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 291 KVTDPSVSKFLYEKASSSDKKLKLY--EDAYHSILEG------EPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred CccChHHHHHHHHHcCCCCceEEEe--CCCeeecccC------CChhhHHHHHHHHHHHHHHhcc
Confidence 9999999999999986545688888 9999999987 5554 88999999998864
|
|
| >PLN02679 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.7e-19 Score=178.23 Aligned_cols=256 Identities=17% Similarity=0.159 Sum_probs=140.9
Q ss_pred cccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHh
Q 012210 158 LERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRA 237 (468)
Q Consensus 158 l~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~ 237 (468)
+-.|.+.+-...++.+...|+ .+|+|++||+.|++..-.. ...+|++++++ +|+.++++.+..
T Consensus 92 vllHG~~~~~~~w~~~~~~L~----~~~~via~Dl~G~G~S~~~------------~~~~~~~~~~a-~~l~~~l~~l~~ 154 (360)
T PLN02679 92 LLVHGFGASIPHWRRNIGVLA----KNYTVYAIDLLGFGASDKP------------PGFSYTMETWA-ELILDFLEEVVQ 154 (360)
T ss_pred EEECCCCCCHHHHHHHHHHHh----cCCEEEEECCCCCCCCCCC------------CCccccHHHHH-HHHHHHHHHhcC
Confidence 333333333334444544444 6899999999999763110 01245677876 888888887643
Q ss_pred hcCCCCCcEEEEEEehhHHHHHHHHHh-cCCCCCcccccceeEEccccccCCchh----hHHhhcccCchh-hhcCCCCc
Q 012210 238 QSKPKDGKLLAIGHSMGGILLYAMLSR-CGFEGRESRLAAIVTLASSLDYTSSKS----TLKLLLPLADPA-QALNVPVV 311 (468)
Q Consensus 238 ~~~~~~~~v~lvGhS~GG~ia~~~a~~-~~~~~~p~~V~~lVllap~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~ 311 (468)
. +++++||||||.+++.++.. + |++|+++|+++++........ ......+..... .....
T Consensus 155 ~------~~~lvGhS~Gg~ia~~~a~~~~-----P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 220 (360)
T PLN02679 155 K------PTVLIGNSVGSLACVIAASEST-----RDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQ--- 220 (360)
T ss_pred C------CeEEEEECHHHHHHHHHHHhcC-----hhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhc---
Confidence 2 99999999999999988874 4 889999999987643221100 000000000000 00000
Q ss_pred chHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccC
Q 012210 312 PLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIH 391 (468)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 391 (468)
......++........+..++...+......+.+....+. ..... + .....+...... . ...+....+.
T Consensus 221 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~-~~~~~~~~~~~~-~-----~~~~~~~~l~ 289 (360)
T PLN02679 221 --RGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIR-GPADD-E-GALDAFVSIVTG-P-----PGPNPIKLIP 289 (360)
T ss_pred --hhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHH-hhccC-C-ChHHHHHHHHhc-C-----CCCCHHHHhh
Confidence 0000000000000111112222211111122333322221 11111 1 111112211110 0 0112234678
Q ss_pred ccCccEEEEecCCCCcCCHHH-----HHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 392 KCNIPILAIAGDQDLICPPEA-----VEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 392 ~I~vPvLiI~G~~D~ivp~~~-----~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
+|++|+|+|+|++|.++|++. ...+.+.+++. +++++ +++||+.|.| .|+++.+.|.+||++..
T Consensus 290 ~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~--~l~~i--~~aGH~~~~E------~Pe~~~~~I~~FL~~~~ 358 (360)
T PLN02679 290 RISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNV--TLYVL--EGVGHCPHDD------RPDLVHEKLLPWLAQLP 358 (360)
T ss_pred hcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCce--EEEEc--CCCCCCcccc------CHHHHHHHHHHHHHhcC
Confidence 899999999999999999863 24566778876 78888 9999999998 99999999999998754
|
|
| >PHA02857 monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.9e-18 Score=168.45 Aligned_cols=245 Identities=17% Similarity=0.153 Sum_probs=146.5
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|++.+-...++.+++.|+ .+||.|+++|+.|++..-. .... ..++..+. +|+...+++++
T Consensus 28 v~llHG~~~~~~~~~~~~~~l~---~~g~~via~D~~G~G~S~~--------~~~~----~~~~~~~~-~d~~~~l~~~~ 91 (276)
T PHA02857 28 VFISHGAGEHSGRYEELAENIS---SLGILVFSHDHIGHGRSNG--------EKMM----IDDFGVYV-RDVVQHVVTIK 91 (276)
T ss_pred EEEeCCCccccchHHHHHHHHH---hCCCEEEEccCCCCCCCCC--------ccCC----cCCHHHHH-HHHHHHHHHHH
Confidence 3443444444455666777777 8899999999999976311 0000 11556666 89999998887
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhH
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAL 316 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
...+.. +++++||||||++++.+|.++ |+.++++|+++|........ ....+. ...
T Consensus 92 ~~~~~~--~~~lvG~S~GG~ia~~~a~~~-----p~~i~~lil~~p~~~~~~~~-~~~~~~----------------~~~ 147 (276)
T PHA02857 92 STYPGV--PVFLLGHSMGATISILAAYKN-----PNLFTAMILMSPLVNAEAVP-RLNLLA----------------AKL 147 (276)
T ss_pred hhCCCC--CEEEEEcCchHHHHHHHHHhC-----ccccceEEEecccccccccc-HHHHHH----------------HHH
Confidence 665443 899999999999999999886 88899999999865421110 000000 000
Q ss_pred HHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccC---CCcHHHHHHHHHHHhcCcccccCCccccccccCcc
Q 012210 317 LTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFC---TIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKC 393 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I 393 (468)
....++..........++ . .+......+..+... .............. .+....+.+|
T Consensus 148 ~~~~~~~~~~~~~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~i 208 (276)
T PHA02857 148 MGIFYPNKIVGKLCPESV----S----RDMDEVYKYQYDPLVNHEKIKAGFASQVLKAT-----------NKVRKIIPKI 208 (276)
T ss_pred HHHhCCCCccCCCCHhhc----c----CCHHHHHHHhcCCCccCCCccHHHHHHHHHHH-----------HHHHHhcccC
Confidence 000011000000000000 0 000111111111100 01111111111110 0123467889
Q ss_pred CccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccC
Q 012210 394 NIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 466 (468)
Q Consensus 394 ~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~ 466 (468)
++|+|+++|++|.++|++.++++.+.++. .++++++ ++++|..|.|. ++.++++++.|.+||+++.+
T Consensus 209 ~~Pvliv~G~~D~i~~~~~~~~l~~~~~~-~~~~~~~--~~~gH~~~~e~---~~~~~~~~~~~~~~l~~~~~ 275 (276)
T PHA02857 209 KTPILILQGTNNEISDVSGAYYFMQHANC-NREIKIY--EGAKHHLHKET---DEVKKSVMKEIETWIFNRVK 275 (276)
T ss_pred CCCEEEEecCCCCcCChHHHHHHHHHccC-CceEEEe--CCCcccccCCc---hhHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999998854 4588888 99999999871 12367899999999998754
|
|
| >KOG1455 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.7e-19 Score=166.94 Aligned_cols=249 Identities=17% Similarity=0.184 Sum_probs=166.7
Q ss_pred ccccccc----hhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhh
Q 012210 163 SSAIAIQ----IRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQ 238 (468)
Q Consensus 163 ~~G~~~~----i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~ 238 (468)
-||.+.+ ..+++.+|+ ..||.|++.|..||+.. .|... +--+++..+ +|+.+.++.++.+
T Consensus 60 ~HG~g~~~s~~~~~~a~~l~---~~g~~v~a~D~~GhG~S----------dGl~~--yi~~~d~~v-~D~~~~~~~i~~~ 123 (313)
T KOG1455|consen 60 CHGYGEHSSWRYQSTAKRLA---KSGFAVYAIDYEGHGRS----------DGLHA--YVPSFDLVV-DDVISFFDSIKER 123 (313)
T ss_pred EcCCcccchhhHHHHHHHHH---hCCCeEEEeeccCCCcC----------CCCcc--cCCcHHHHH-HHHHHHHHHHhhc
Confidence 5666655 477899999 99999999999999773 12211 122566665 9999999998887
Q ss_pred cCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHH
Q 012210 239 SKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLT 318 (468)
Q Consensus 239 ~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (468)
.....-+.+++||||||.|++.++.+. |....++|+++|.....+...+-.. ...+..++.
T Consensus 124 ~e~~~lp~FL~GeSMGGAV~Ll~~~k~-----p~~w~G~ilvaPmc~i~~~~kp~p~--------------v~~~l~~l~ 184 (313)
T KOG1455|consen 124 EENKGLPRFLFGESMGGAVALLIALKD-----PNFWDGAILVAPMCKISEDTKPHPP--------------VISILTLLS 184 (313)
T ss_pred cccCCCCeeeeecCcchHHHHHHHhhC-----CcccccceeeecccccCCccCCCcH--------------HHHHHHHHH
Confidence 766666899999999999999999875 8899999999997665443110000 000111222
Q ss_pred HhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEE
Q 012210 319 AAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPIL 398 (468)
Q Consensus 319 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvL 398 (468)
.+.|....-+ ..-.......+++..+....+.++-.....+......++. ..++...+.++++|++
T Consensus 185 ~liP~wk~vp------~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~--------~~~le~~l~~vtvPfl 250 (313)
T KOG1455|consen 185 KLIPTWKIVP------TKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRV--------TADLEKNLNEVTVPFL 250 (313)
T ss_pred HhCCceeecC------CccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHH--------HHHHHHhcccccccEE
Confidence 2222111000 0000001112455555544444443332233333333321 1124567899999999
Q ss_pred EEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 399 AIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 399 iI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
|+||+.|.++.+..++++++..+..+++++++ |++-|..+.. --+++.+.|...|.+||+++
T Consensus 251 ilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlY--pGm~H~Ll~g--E~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 251 ILHGTDDKVTDPKVSKELYEKASSSDKTLKLY--PGMWHSLLSG--EPDENVEIVFGDIISWLDER 312 (313)
T ss_pred EEecCCCcccCcHHHHHHHHhccCCCCceecc--ccHHHHhhcC--CCchhHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999998 9999988862 12346788999999999876
|
|
| >TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Probab=99.80 E-value=7.1e-18 Score=170.57 Aligned_cols=256 Identities=20% Similarity=0.287 Sum_probs=157.2
Q ss_pred hhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEE
Q 012210 171 RDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIG 250 (468)
Q Consensus 171 ~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvG 250 (468)
+.+++.|+ .+||.|+++|+.+++.. ...++++++..+|+.+++++++.+.+.. +++++|
T Consensus 84 ~~~~~~L~---~~G~~V~~~D~~g~g~s----------------~~~~~~~d~~~~~~~~~v~~l~~~~~~~--~i~lvG 142 (350)
T TIGR01836 84 RSLVRGLL---ERGQDVYLIDWGYPDRA----------------DRYLTLDDYINGYIDKCVDYICRTSKLD--QISLLG 142 (350)
T ss_pred chHHHHHH---HCCCeEEEEeCCCCCHH----------------HhcCCHHHHHHHHHHHHHHHHHHHhCCC--cccEEE
Confidence 67888888 99999999998665320 0133677887677999999999987765 999999
Q ss_pred EehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcC-CCCcchHhHHHHhcCCCCC-ch
Q 012210 251 HSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALN-VPVVPLGALLTAAYPLSSS-PP 328 (468)
Q Consensus 251 hS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~ 328 (468)
|||||++++.+++.+ +++|+++|+++++.++.........+........... ....+ +.++...+.+... ..
T Consensus 143 hS~GG~i~~~~~~~~-----~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~f~~l~p~~~ 216 (350)
T TIGR01836 143 ICQGGTFSLCYAALY-----PDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTMGNIP-GELLNLTFLMLKPFSL 216 (350)
T ss_pred ECHHHHHHHHHHHhC-----chheeeEEEeccccccCCCCchhhhhccccCHHHHHHhcCCCC-HHHHHHHHHhcCcchh
Confidence 999999999999887 7889999999999887654322222211111111111 00111 1111111111111 01
Q ss_pred hHHHHHHHhhhccccCCHHHHHHHH-----hhccCCCcHHHHHHHHHHH-hcCcccccCCcc---ccccccCccCccEEE
Q 012210 329 YVFSWLNNLISAEDMMHPELLKKLV-----LNNFCTIPAKLILQLTTAF-REGGLRDRGGKF---FYKDHIHKCNIPILA 399 (468)
Q Consensus 329 ~~~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~l~~I~vPvLi 399 (468)
.+..+..... ...+++.+..+. .......+...+.++...+ ....+.. +.. .....+.+|+||+|+
T Consensus 217 ~~~~~~~~~~---~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~--g~~~~~~~~~~l~~i~~Pvli 291 (350)
T TIGR01836 217 GYQKYVNLVD---ILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLIN--GEVEIGGRKVDLKNIKMPILN 291 (350)
T ss_pred hhHHHHHHHH---hcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccC--CeeEECCEEccHHhCCCCeEE
Confidence 1111111110 011333333321 1112244555555555432 2222211 111 113357889999999
Q ss_pred EecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 400 IAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 400 I~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
++|++|.++|++.++.+.+.+++..++++++ + .+|.+++.++++++++++.|.+||.++
T Consensus 292 v~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~--~----~gH~~~~~~~~~~~~v~~~i~~wl~~~ 350 (350)
T TIGR01836 292 IYAERDHLVPPDASKALNDLVSSEDYTELSF--P----GGHIGIYVSGKAQKEVPPAIGKWLQAR 350 (350)
T ss_pred EecCCCCcCCHHHHHHHHHHcCCCCeEEEEc--C----CCCEEEEECchhHhhhhHHHHHHHHhC
Confidence 9999999999999999999998766677775 2 355555566667899999999999864
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. |
| >TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.2e-18 Score=168.19 Aligned_cols=228 Identities=17% Similarity=0.189 Sum_probs=136.4
Q ss_pred hhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEE
Q 012210 170 IRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAI 249 (468)
Q Consensus 170 i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lv 249 (468)
++.+.+.| ..+|+|+++|+.|++.... + ..+++++++. +|+.++++++... +++++
T Consensus 41 w~~~~~~L----~~~~~vi~~Dl~G~G~S~~---~----------~~~~~~~~~~-~~~~~~i~~l~~~------~~~Lv 96 (276)
T TIGR02240 41 VFPFIEAL----DPDLEVIAFDVPGVGGSST---P----------RHPYRFPGLA-KLAARMLDYLDYG------QVNAI 96 (276)
T ss_pred HHHHHHHh----ccCceEEEECCCCCCCCCC---C----------CCcCcHHHHH-HHHHHHHHHhCcC------ceEEE
Confidence 34444444 4689999999999976311 0 1245677886 8999988887432 89999
Q ss_pred EEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCchh
Q 012210 250 GHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPY 329 (468)
Q Consensus 250 GhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (468)
||||||.+++.+|.++ |++|+++|+++++..................... +....... ..
T Consensus 97 G~S~GG~va~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~----~~ 156 (276)
T TIGR02240 97 GVSWGGALAQQFAHDY-----PERCKKLILAATAAGAVMVPGKPKVLMMMASPRR-----------YIQPSHGI----HI 156 (276)
T ss_pred EECHHHHHHHHHHHHC-----HHHhhheEEeccCCccccCCCchhHHHHhcCchh-----------hhcccccc----ch
Confidence 9999999999999997 8999999999987543211110000000000000 00000000 00
Q ss_pred HHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecCCCCcCC
Q 012210 330 VFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICP 409 (468)
Q Consensus 330 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~D~ivp 409 (468)
...++... ...+++....................+.... .......+.+|+||+|+|+|++|.++|
T Consensus 157 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~i~~P~lii~G~~D~~v~ 222 (276)
T TIGR02240 157 APDIYGGA----FRRDPELAMAHASKVRSGGKLGYYWQLFAGL----------GWTSIHWLHKIQQPTLVLAGDDDPIIP 222 (276)
T ss_pred hhhhccce----eeccchhhhhhhhhcccCCCchHHHHHHHHc----------CCchhhHhhcCCCCEEEEEeCCCCcCC
Confidence 00010000 0011111111111110011101111111100 011124578899999999999999999
Q ss_pred HHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccC
Q 012210 410 PEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 466 (468)
Q Consensus 410 ~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~ 466 (468)
++.++++.+.++++ +++++ ++ ||+.|.+ .|+++.+.|.+|+++...
T Consensus 223 ~~~~~~l~~~~~~~--~~~~i--~~-gH~~~~e------~p~~~~~~i~~fl~~~~~ 268 (276)
T TIGR02240 223 LINMRLLAWRIPNA--ELHII--DD-GHLFLIT------RAEAVAPIIMKFLAEERQ 268 (276)
T ss_pred HHHHHHHHHhCCCC--EEEEE--cC-CCchhhc------cHHHHHHHHHHHHHHhhh
Confidence 99999999999987 77777 54 9999998 999999999999997653
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. |
| >PRK00870 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.6e-18 Score=170.05 Aligned_cols=238 Identities=13% Similarity=0.153 Sum_probs=135.6
Q ss_pred ccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcE
Q 012210 167 AIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKL 246 (468)
Q Consensus 167 ~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v 246 (468)
...+..++..|+ ..||+|+++|+.|++..-. . . ...+|++++++ +|+.++++.+.. + ++
T Consensus 59 ~~~w~~~~~~L~---~~gy~vi~~Dl~G~G~S~~---~------~--~~~~~~~~~~a-~~l~~~l~~l~~----~--~v 117 (302)
T PRK00870 59 SYLYRKMIPILA---AAGHRVIAPDLIGFGRSDK---P------T--RREDYTYARHV-EWMRSWFEQLDL----T--DV 117 (302)
T ss_pred hhhHHHHHHHHH---hCCCEEEEECCCCCCCCCC---C------C--CcccCCHHHHH-HHHHHHHHHcCC----C--CE
Confidence 344555666666 6899999999999976310 0 0 01245777886 888888877643 2 89
Q ss_pred EEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCc--hhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCC
Q 012210 247 LAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSS--KSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLS 324 (468)
Q Consensus 247 ~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (468)
+++||||||.+++.+|.++ |++|.++|++++....... ............ ..+........
T Consensus 118 ~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~------- 180 (302)
T PRK00870 118 TLVCQDWGGLIGLRLAAEH-----PDRFARLVVANTGLPTGDGPMPDAFWAWRAFSQ-----YSPVLPVGRLV------- 180 (302)
T ss_pred EEEEEChHHHHHHHHHHhC-----hhheeEEEEeCCCCCCccccchHHHhhhhcccc-----cCchhhHHHHh-------
Confidence 9999999999999999987 8999999999875432211 000000000000 00000000000
Q ss_pred CCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCC-cHHHHHHHHHHHhcCccc-ccCCccccccccCccCccEEEEec
Q 012210 325 SSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTI-PAKLILQLTTAFREGGLR-DRGGKFFYKDHIHKCNIPILAIAG 402 (468)
Q Consensus 325 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~I~vPvLiI~G 402 (468)
... .......+....+. ...... .......+.......... ...........+.+|+||+|+|+|
T Consensus 181 ----------~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G 247 (302)
T PRK00870 181 ----------NGG--TVRDLSDAVRAAYD-APFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFS 247 (302)
T ss_pred ----------hcc--ccccCCHHHHHHhh-cccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEec
Confidence 000 00001111111110 000000 000000000000000000 000000112457889999999999
Q ss_pred CCCCcCCHHHHHHHHHhCCCCc-eeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 403 DQDLICPPEAVEETVKLLPEDL-VTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 403 ~~D~ivp~~~~~~l~~~ip~~~-~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
++|.++|... +.+.+.+++.. +.++++ ++++|+.|.+ .|+.+.+.|.+||+++
T Consensus 248 ~~D~~~~~~~-~~~~~~~~~~~~~~~~~i--~~~gH~~~~e------~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 248 DSDPITGGGD-AILQKRIPGAAGQPHPTI--KGAGHFLQED------SGEELAEAVLEFIRAT 301 (302)
T ss_pred CCCCcccCch-HHHHhhcccccccceeee--cCCCccchhh------ChHHHHHHHHHHHhcC
Confidence 9999999876 88999999762 236677 8999999998 9999999999999876
|
|
| >TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Probab=99.79 E-value=8.6e-18 Score=163.94 Aligned_cols=229 Identities=15% Similarity=0.219 Sum_probs=130.3
Q ss_pred HHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHH
Q 012210 177 LVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGI 256 (468)
Q Consensus 177 la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ 256 (468)
+..++.+||+|+++|+.|++..-... ....... .++ +|+.++++.+... +++++||||||+
T Consensus 53 ~~~l~~~~~~vi~~D~~G~G~S~~~~-----------~~~~~~~-~~~-~~l~~~l~~l~~~------~~~lvG~S~Gg~ 113 (282)
T TIGR03343 53 IGPFVDAGYRVILKDSPGFNKSDAVV-----------MDEQRGL-VNA-RAVKGLMDALDIE------KAHLVGNSMGGA 113 (282)
T ss_pred HHHHHhCCCEEEEECCCCCCCCCCCc-----------Ccccccc-hhH-HHHHHHHHHcCCC------CeeEEEECchHH
Confidence 33334789999999999997631100 0000011 233 7777777776432 999999999999
Q ss_pred HHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCchhHHHHHHH
Q 012210 257 LLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNN 336 (468)
Q Consensus 257 ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 336 (468)
+++.+|.++ |++|+++|+++++....... ... + ......+... +. .........++..
T Consensus 114 ia~~~a~~~-----p~~v~~lvl~~~~~~~~~~~------~~~--~-------~~~~~~~~~~-~~-~~~~~~~~~~~~~ 171 (282)
T TIGR03343 114 TALNFALEY-----PDRIGKLILMGPGGLGPSLF------APM--P-------MEGIKLLFKL-YA-EPSYETLKQMLNV 171 (282)
T ss_pred HHHHHHHhC-----hHhhceEEEECCCCCCcccc------ccC--c-------hHHHHHHHHH-hc-CCCHHHHHHHHhh
Confidence 999999997 89999999998753211000 000 0 0000000000 00 0000000111111
Q ss_pred hhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecCCCCcCCHHHHHHH
Q 012210 337 LISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEET 416 (468)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~D~ivp~~~~~~l 416 (468)
........+.+..+.... .....+.. ...+........+ ...+....+++|+||+|+|+|++|.++|++.++++
T Consensus 172 ~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~ 245 (282)
T TIGR03343 172 FLFDQSLITEELLQGRWE-NIQRQPEH-LKNFLISSQKAPL----STWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKL 245 (282)
T ss_pred CccCcccCcHHHHHhHHH-HhhcCHHH-HHHHHHhcccccc----ccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHH
Confidence 000011111111111111 01111111 1111111110000 11223456789999999999999999999999999
Q ss_pred HHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 012210 417 VKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 462 (468)
Q Consensus 417 ~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~ 462 (468)
.+.+|+. +++++ +++||+.+.+ .|+.|.+.|.+||.
T Consensus 246 ~~~~~~~--~~~~i--~~agH~~~~e------~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 246 LWNMPDA--QLHVF--SRCGHWAQWE------HADAFNRLVIDFLR 281 (282)
T ss_pred HHhCCCC--EEEEe--CCCCcCCccc------CHHHHHHHHHHHhh
Confidence 9999987 88888 9999999998 99999999999996
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. |
| >PLN02298 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.78 E-value=9.4e-18 Score=168.15 Aligned_cols=240 Identities=13% Similarity=0.132 Sum_probs=141.1
Q ss_pred chhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEE
Q 012210 169 QIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLA 248 (468)
Q Consensus 169 ~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~l 248 (468)
....++.+|+ .+||+|+++|++|+|..-. . ..+..+++.++ +|+.+++++++........++++
T Consensus 75 ~~~~~~~~L~---~~Gy~V~~~D~rGhG~S~~----------~--~~~~~~~~~~~-~D~~~~i~~l~~~~~~~~~~i~l 138 (330)
T PLN02298 75 TFQSTAIFLA---QMGFACFALDLEGHGRSEG----------L--RAYVPNVDLVV-EDCLSFFNSVKQREEFQGLPRFL 138 (330)
T ss_pred ehhHHHHHHH---hCCCEEEEecCCCCCCCCC----------c--cccCCCHHHHH-HHHHHHHHHHHhcccCCCCCEEE
Confidence 3455677787 8999999999999976310 0 01223567776 99999999998753322347999
Q ss_pred EEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCch
Q 012210 249 IGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPP 328 (468)
Q Consensus 249 vGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (468)
+||||||.+++.++.++ |++|+++|+++|............. ......++....+......
T Consensus 139 ~GhSmGG~ia~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~ 199 (330)
T PLN02298 139 YGESMGGAICLLIHLAN-----PEGFDGAVLVAPMCKISDKIRPPWP--------------IPQILTFVARFLPTLAIVP 199 (330)
T ss_pred EEecchhHHHHHHHhcC-----cccceeEEEecccccCCcccCCchH--------------HHHHHHHHHHHCCCCcccc
Confidence 99999999999999886 7889999999886543321000000 0000011111111100000
Q ss_pred hHHHHHHHhhhccccCCHHHHHHHHhh-c--cC-CCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecCC
Q 012210 329 YVFSWLNNLISAEDMMHPELLKKLVLN-N--FC-TIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQ 404 (468)
Q Consensus 329 ~~~~~l~~~~~~~~~~~~~~~~~~~~~-~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~ 404 (468)
. ...+.. ...... ...+... . +. .........+.... ......+.+|++|+|+|+|++
T Consensus 200 ~-~~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~i~~PvLii~G~~ 261 (330)
T PLN02298 200 T-ADLLEK-----SVKVPA-KKIIAKRNPMRYNGKPRLGTVVELLRVT-----------DYLGKKLKDVSIPFIVLHGSA 261 (330)
T ss_pred C-CCcccc-----cccCHH-HHHHHHhCccccCCCccHHHHHHHHHHH-----------HHHHHhhhhcCCCEEEEecCC
Confidence 0 000000 000000 0000000 0 00 00111111111110 012346788999999999999
Q ss_pred CCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 405 DLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 405 D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
|.++|++.++++++.++...++++++ ++++|..+.+-. ....+++.+.|.+||.++.
T Consensus 262 D~ivp~~~~~~l~~~i~~~~~~l~~~--~~a~H~~~~e~p--d~~~~~~~~~i~~fl~~~~ 318 (330)
T PLN02298 262 DVVTDPDVSRALYEEAKSEDKTIKIY--DGMMHSLLFGEP--DENIEIVRRDILSWLNERC 318 (330)
T ss_pred CCCCCHHHHHHHHHHhccCCceEEEc--CCcEeeeecCCC--HHHHHHHHHHHHHHHHHhc
Confidence 99999999999999987545688888 899999887510 0122568889999999874
|
|
| >PLN02578 hydrolase | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.2e-17 Score=169.24 Aligned_cols=259 Identities=15% Similarity=0.191 Sum_probs=144.1
Q ss_pred cccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHh
Q 012210 158 LERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRA 237 (468)
Q Consensus 158 l~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~ 237 (468)
+-.|++.+-...++.+...|+ .+|.|+++|+.|++..-. . ..+|+...+. +|+.++++.+..
T Consensus 90 vliHG~~~~~~~w~~~~~~l~----~~~~v~~~D~~G~G~S~~----------~---~~~~~~~~~a-~~l~~~i~~~~~ 151 (354)
T PLN02578 90 VLIHGFGASAFHWRYNIPELA----KKYKVYALDLLGFGWSDK----------A---LIEYDAMVWR-DQVADFVKEVVK 151 (354)
T ss_pred EEECCCCCCHHHHHHHHHHHh----cCCEEEEECCCCCCCCCC----------c---ccccCHHHHH-HHHHHHHHHhcc
Confidence 333444333344455555554 689999999999865211 0 1245677776 888888887754
Q ss_pred hcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHH
Q 012210 238 QSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALL 317 (468)
Q Consensus 238 ~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (468)
. +++++||||||.+++.+|.++ |++|+++|+++++..+................. .......+....+
T Consensus 152 ~------~~~lvG~S~Gg~ia~~~A~~~-----p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 219 (354)
T PLN02578 152 E------PAVLVGNSLGGFTALSTAVGY-----PELVAGVALLNSAGQFGSESREKEEAIVVEETV-LTRFVVKPLKEWF 219 (354)
T ss_pred C------CeEEEEECHHHHHHHHHHHhC-----hHhcceEEEECCCccccccccccccccccccch-hhHHHhHHHHHHH
Confidence 2 899999999999999999998 899999999987654332111000000000000 0000000000000
Q ss_pred HHh-----cCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCc
Q 012210 318 TAA-----YPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHK 392 (468)
Q Consensus 318 ~~~-----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 392 (468)
... +.....+..+...+...+......+...................+......+... ....+....+.+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~ 294 (354)
T PLN02578 220 QRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFN-----QSRYTLDSLLSK 294 (354)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcC-----CCCCCHHHHhhc
Confidence 000 0000111111111111111111112222222111111111112222222211100 011223456789
Q ss_pred cCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 012210 393 CNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 462 (468)
Q Consensus 393 I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~ 462 (468)
|++|+|+|+|++|.++|.+.++++.+.+|+. +++++ ++||+.|.| .|+++.+.|.+|++
T Consensus 295 i~~PvLiI~G~~D~~v~~~~~~~l~~~~p~a--~l~~i---~~GH~~~~e------~p~~~~~~I~~fl~ 353 (354)
T PLN02578 295 LSCPLLLLWGDLDPWVGPAKAEKIKAFYPDT--TLVNL---QAGHCPHDE------VPEQVNKALLEWLS 353 (354)
T ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHhCCCC--EEEEe---CCCCCcccc------CHHHHHHHHHHHHh
Confidence 9999999999999999999999999999987 77776 489999998 99999999999986
|
|
| >PRK03592 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1e-17 Score=165.00 Aligned_cols=259 Identities=16% Similarity=0.164 Sum_probs=142.3
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|.+.+-...++.++..|+ ..+ +|++||+.|++..-.. ..+|++.+++ +|+.++++.+.
T Consensus 30 vvllHG~~~~~~~w~~~~~~L~---~~~-~via~D~~G~G~S~~~-------------~~~~~~~~~a-~dl~~ll~~l~ 91 (295)
T PRK03592 30 IVFLHGNPTSSYLWRNIIPHLA---GLG-RCLAPDLIGMGASDKP-------------DIDYTFADHA-RYLDAWFDALG 91 (295)
T ss_pred EEEECCCCCCHHHHHHHHHHHh---hCC-EEEEEcCCCCCCCCCC-------------CCCCCHHHHH-HHHHHHHHHhC
Confidence 4443555555566677777777 654 9999999999763110 1135677886 89999988875
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhH
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAL 316 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
.. +++++||||||.+++.+|.++ |++|+++|++++................. ...+..+... ...
T Consensus 92 ~~------~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lil~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~ 156 (295)
T PRK03592 92 LD------DVVLVGHDWGSALGFDWAARH-----PDRVRGIAFMEAIVRPMTWDDFPPAVREL---FQALRSPGEG-EEM 156 (295)
T ss_pred CC------CeEEEEECHHHHHHHHHHHhC-----hhheeEEEEECCCCCCcchhhcchhHHHH---HHHHhCcccc-ccc
Confidence 42 999999999999999999998 99999999999743221100000000000 0000000000 000
Q ss_pred HHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccc-cC-CccccccccCccC
Q 012210 317 LTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRD-RG-GKFFYKDHIHKCN 394 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~l~~I~ 394 (468)
. .....++..++..... ....++.+..+...............+........... .. ...++...+.+|+
T Consensus 157 ~------~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 228 (295)
T PRK03592 157 V------LEENVFIERVLPGSIL--RPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSD 228 (295)
T ss_pred c------cchhhHHhhcccCccc--ccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCC
Confidence 0 0000000000000000 01122222222111100000011111111110000000 00 0011234578899
Q ss_pred ccEEEEecCCCCcCCHHHHHHH-HHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccC
Q 012210 395 IPILAIAGDQDLICPPEAVEET-VKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 466 (468)
Q Consensus 395 vPvLiI~G~~D~ivp~~~~~~l-~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~ 466 (468)
||+|+|+|++|.++++....++ .+.+++. +++++ +++||+.|.+ .|+++.+.|.+|+++...
T Consensus 229 ~P~lii~G~~D~~~~~~~~~~~~~~~~~~~--~~~~i--~~~gH~~~~e------~p~~v~~~i~~fl~~~~~ 291 (295)
T PRK03592 229 VPKLLINAEPGAILTTGAIRDWCRSWPNQL--EITVF--GAGLHFAQED------SPEEIGAAIAAWLRRLRL 291 (295)
T ss_pred CCeEEEeccCCcccCcHHHHHHHHHhhhhc--ceeec--cCcchhhhhc------CHHHHHHHHHHHHHHhcc
Confidence 9999999999999955555454 4567766 77887 8999999998 899999999999998764
|
|
| >COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.77 E-value=7e-18 Score=160.55 Aligned_cols=199 Identities=20% Similarity=0.291 Sum_probs=150.3
Q ss_pred ccccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccch--HHHhhcccceEeecCChhhHHhhhHHHHH
Q 012210 155 SSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTI--DDFQKQLDLIVQYDWDFDHYLEEDVPAAM 232 (468)
Q Consensus 155 ~~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~--~~l~~~~~~~~~~D~~~~~~~~~D~~a~i 232 (468)
++++..+|..|++++|++++++|| .+||.|++||++.+.+...... ......+ ..... +..+.. .|+.+++
T Consensus 28 P~VIv~hei~Gl~~~i~~~a~rlA---~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~-~d~~a~~ 100 (236)
T COG0412 28 PGVIVLHEIFGLNPHIRDVARRLA---KAGYVVLAPDLYGRQGDPTDIEDEPAELETG-LVERV--DPAEVL-ADIDAAL 100 (236)
T ss_pred CEEEEEecccCCchHHHHHHHHHH---hCCcEEEechhhccCCCCCcccccHHHHhhh-hhccC--CHHHHH-HHHHHHH
Confidence 567888999999999999999999 9999999999999876644333 2111122 11112 234554 9999999
Q ss_pred HHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcc
Q 012210 233 EYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVP 312 (468)
Q Consensus 233 ~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (468)
++|..+......+|.++|+||||.+++.++.. .++|++.|...+......
T Consensus 101 ~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~------~~~v~a~v~fyg~~~~~~------------------------ 150 (236)
T COG0412 101 DYLARQPQVDPKRIGVVGFCMGGGLALLAATR------APEVKAAVAFYGGLIADD------------------------ 150 (236)
T ss_pred HHHHhCCCCCCceEEEEEEcccHHHHHHhhcc------cCCccEEEEecCCCCCCc------------------------
Confidence 99998875555689999999999999999987 447898888655322100
Q ss_pred hHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCc
Q 012210 313 LGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHK 392 (468)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 392 (468)
.....+
T Consensus 151 --------------------------------------------------------------------------~~~~~~ 156 (236)
T COG0412 151 --------------------------------------------------------------------------TADAPK 156 (236)
T ss_pred --------------------------------------------------------------------------cccccc
Confidence 012357
Q ss_pred cCccEEEEecCCCCcCCHHHHHHHHHhCCCC--ceeEEEecCCCCCCCCccc-----ccccccchhhHHHHHHHHHhhcc
Q 012210 393 CNIPILAIAGDQDLICPPEAVEETVKLLPED--LVTYKVFGEPSGPHYAHYD-----LVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 393 I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~--~~~~~v~~~~~agH~~H~e-----~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
+++|+|+++|+.|..+|......+.+.+... ..++.++ +++.|..+.+ ........+..|+.+.+||+++.
T Consensus 157 ~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y--~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~ 234 (236)
T COG0412 157 IKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIY--PGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLL 234 (236)
T ss_pred ccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEe--CCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhc
Confidence 8999999999999999999999888888766 4667777 7777866643 24455677889999999999875
Q ss_pred C
Q 012210 466 S 466 (468)
Q Consensus 466 ~ 466 (468)
.
T Consensus 235 ~ 235 (236)
T COG0412 235 G 235 (236)
T ss_pred c
Confidence 4
|
|
| >PRK10749 lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.3e-17 Score=167.28 Aligned_cols=256 Identities=13% Similarity=0.087 Sum_probs=143.2
Q ss_pred ccccccch---hhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhc
Q 012210 163 SSAIAIQI---RDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQS 239 (468)
Q Consensus 163 ~~G~~~~i---~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~ 239 (468)
.||+..+. ++++..++ .+||+|+++|+.|++..-.... .+.. ....++++++ +|+.++++.+....
T Consensus 60 ~HG~~~~~~~y~~~~~~l~---~~g~~v~~~D~~G~G~S~~~~~-----~~~~--~~~~~~~~~~-~d~~~~~~~~~~~~ 128 (330)
T PRK10749 60 CPGRIESYVKYAELAYDLF---HLGYDVLIIDHRGQGRSGRLLD-----DPHR--GHVERFNDYV-DDLAAFWQQEIQPG 128 (330)
T ss_pred ECCccchHHHHHHHHHHHH---HCCCeEEEEcCCCCCCCCCCCC-----CCCc--CccccHHHHH-HHHHHHHHHHHhcC
Confidence 45666554 45666666 8999999999999976421100 0000 1123678887 99999999876554
Q ss_pred CCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchh--hHHhhcccCchhhhcCCCCcchHhHH
Q 012210 240 KPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKS--TLKLLLPLADPAQALNVPVVPLGALL 317 (468)
Q Consensus 240 ~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (468)
+.. +++++||||||.+++.+|.++ |+.++++|+++|......... ....+............ .. ....
T Consensus 129 ~~~--~~~l~GhSmGG~ia~~~a~~~-----p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~ 198 (330)
T PRK10749 129 PYR--KRYALAHSMGGAILTLFLQRH-----PGVFDAIALCAPMFGIVLPLPSWMARRILNWAEGHPRIRD-GY--AIGT 198 (330)
T ss_pred CCC--CeEEEEEcHHHHHHHHHHHhC-----CCCcceEEEECchhccCCCCCcHHHHHHHHHHHHhcCCCC-cC--CCCC
Confidence 443 899999999999999999987 889999999988654321110 00000000000000000 00 0000
Q ss_pred HHhcCCCCCchhHHHHHHHhhhccccCCHHHHH---HHHhhcc-CCCcHHHHHHHHHHHhcCcccccCCccccccccCcc
Q 012210 318 TAAYPLSSSPPYVFSWLNNLISAEDMMHPELLK---KLVLNNF-CTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKC 393 (468)
Q Consensus 318 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I 393 (468)
....+. ++...+ + ...++... +.+.... .......+..+...+.. .......+.++
T Consensus 199 ~~~~~~----~~~~~~----l----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~i 258 (330)
T PRK10749 199 GRWRPL----PFAINV----L----THSRERYRRNLRFYADDPELRVGGPTYHWVRESILA--------GEQVLAGAGDI 258 (330)
T ss_pred CCCCCC----CcCCCC----C----CCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHH--------HHHHHhhccCC
Confidence 000000 000000 0 00111111 1111110 10000011111111100 00112456789
Q ss_pred CccEEEEecCCCCcCCHHHHHHHHHhCCC-----CceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 394 NIPILAIAGDQDLICPPEAVEETVKLLPE-----DLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 394 ~vPvLiI~G~~D~ivp~~~~~~l~~~ip~-----~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
++|+|+|+|++|.+++++.++.+++.+++ ..++++++ |+++|..+.|- +...+++++.|.+||+++
T Consensus 259 ~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~--~gagH~~~~E~---~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 259 TTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVI--KGAYHEILFEK---DAMRSVALNAIVDFFNRH 329 (330)
T ss_pred CCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEe--CCCcchhhhCC---cHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999888753 23477887 99999999871 112578999999999876
|
|
| >COG2267 PldB Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.9e-17 Score=163.04 Aligned_cols=250 Identities=18% Similarity=0.197 Sum_probs=161.1
Q ss_pred ccccccchhh---HHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhc
Q 012210 163 SSAIAIQIRD---LSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQS 239 (468)
Q Consensus 163 ~~G~~~~i~~---~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~ 239 (468)
.||.++|... +++.|. ..||.|++.|+.|++..-. ...|+. + +|.+|. .|+.++++.+....
T Consensus 40 ~HG~~Eh~~ry~~la~~l~---~~G~~V~~~D~RGhG~S~r------~~rg~~----~-~f~~~~-~dl~~~~~~~~~~~ 104 (298)
T COG2267 40 VHGLGEHSGRYEELADDLA---ARGFDVYALDLRGHGRSPR------GQRGHV----D-SFADYV-DDLDAFVETIAEPD 104 (298)
T ss_pred ecCchHHHHHHHHHHHHHH---hCCCEEEEecCCCCCCCCC------CCcCCc----h-hHHHHH-HHHHHHHHHHhccC
Confidence 6888888765 455565 9999999999999977321 111221 1 378887 99999999998753
Q ss_pred CCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCC--chhhHHhhcccCchhhhcCCCCcchHhHH
Q 012210 240 KPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTS--SKSTLKLLLPLADPAQALNVPVVPLGALL 317 (468)
Q Consensus 240 ~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (468)
.. .+++++||||||.|++.++.++ +++|.++|+.+|.+.... .......+. ...+
T Consensus 105 ~~--~p~~l~gHSmGg~Ia~~~~~~~-----~~~i~~~vLssP~~~l~~~~~~~~~~~~~----------------~~~~ 161 (298)
T COG2267 105 PG--LPVFLLGHSMGGLIALLYLARY-----PPRIDGLVLSSPALGLGGAILRLILARLA----------------LKLL 161 (298)
T ss_pred CC--CCeEEEEeCcHHHHHHHHHHhC-----CccccEEEEECccccCChhHHHHHHHHHh----------------cccc
Confidence 32 3999999999999999999998 789999999999887663 111110000 0001
Q ss_pred HHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccE
Q 012210 318 TAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPI 397 (468)
Q Consensus 318 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPv 397 (468)
..+.+...... - . ...........+++..+.+..+..+.........+........ .........+++|+
T Consensus 162 ~~~~p~~~~~~-~-~-~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~-------~~~~~~~~~~~~Pv 231 (298)
T COG2267 162 GRIRPKLPVDS-N-L-LEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGR-------VPALRDAPAIALPV 231 (298)
T ss_pred cccccccccCc-c-c-ccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhc-------ccchhccccccCCE
Confidence 11111100000 0 0 0000000011245556655555443333333332222222111 01123467889999
Q ss_pred EEEecCCCCcCC-HHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccch--hhHHHHHHHHHhhccCC
Q 012210 398 LAIAGDQDLICP-PEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAV--EQVYPCIVQFLGRYDSV 467 (468)
Q Consensus 398 LiI~G~~D~ivp-~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~p--e~v~~~I~~FL~~~~~~ 467 (468)
|+++|++|.+++ .+...++.+.....+++++++ +++.|..+.| ..+ +++++.+.+|+.++...
T Consensus 232 Lll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~--~g~~He~~~E-----~~~~r~~~~~~~~~~l~~~~~~ 297 (298)
T COG2267 232 LLLQGGDDRVVDNVEGLARFFERAGSPDKELKVI--PGAYHELLNE-----PDRAREEVLKDILAWLAEALPS 297 (298)
T ss_pred EEEecCCCccccCcHHHHHHHHhcCCCCceEEec--CCcchhhhcC-----cchHHHHHHHHHHHHHHhhccC
Confidence 999999999999 788888888888776788888 9999999998 355 89999999999988654
|
|
| >PLN02652 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.1e-17 Score=166.87 Aligned_cols=247 Identities=15% Similarity=0.144 Sum_probs=147.1
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|++.+-...+..+++.|+ .+||.|+++|+.|++..- +. ..+..+++.+. +|+.++++++.
T Consensus 139 Vl~lHG~~~~~~~~~~~a~~L~---~~Gy~V~~~D~rGhG~S~----------~~--~~~~~~~~~~~-~Dl~~~l~~l~ 202 (395)
T PLN02652 139 LIIIHGLNEHSGRYLHFAKQLT---SCGFGVYAMDWIGHGGSD----------GL--HGYVPSLDYVV-EDTEAFLEKIR 202 (395)
T ss_pred EEEECCchHHHHHHHHHHHHHH---HCCCEEEEeCCCCCCCCC----------CC--CCCCcCHHHHH-HHHHHHHHHHH
Confidence 4443333332334566777777 899999999999997631 10 01223566776 99999999998
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhH
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAL 316 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
...+.. +++++||||||.+++.++.+ ...++++.++|+.+|.............+ ..+
T Consensus 203 ~~~~~~--~i~lvGhSmGG~ial~~a~~---p~~~~~v~glVL~sP~l~~~~~~~~~~~~-----------------~~l 260 (395)
T PLN02652 203 SENPGV--PCFLFGHSTGGAVVLKAASY---PSIEDKLEGIVLTSPALRVKPAHPIVGAV-----------------API 260 (395)
T ss_pred HhCCCC--CEEEEEECHHHHHHHHHHhc---cCcccccceEEEECcccccccchHHHHHH-----------------HHH
Confidence 764433 89999999999999987753 11134799999998876543321111110 011
Q ss_pred HHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccC---CCcHHHHHHHHHHHhcCcccccCCccccccccCcc
Q 012210 317 LTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFC---TIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKC 393 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I 393 (468)
+..+.+...... ... .......++......+.+... .............. ......+.+|
T Consensus 261 ~~~~~p~~~~~~-----~~~-~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~-----------~~l~~~L~~I 323 (395)
T PLN02652 261 FSLVAPRFQFKG-----ANK-RGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRIS-----------SYLTRNFKSV 323 (395)
T ss_pred HHHhCCCCcccC-----ccc-ccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHH-----------HHHHhhcccC
Confidence 111111000000 000 000000012221111111111 01111111111110 0123467889
Q ss_pred CccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 394 NIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 394 ~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
++|+|+++|++|.++|++.++++++.+++..++++++ |+++|..+.+ ..++++++.|.+||+.+.
T Consensus 324 ~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~--~ga~H~l~~e-----~~~e~v~~~I~~FL~~~~ 388 (395)
T PLN02652 324 TVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLY--DGFLHDLLFE-----PEREEVGRDIIDWMEKRL 388 (395)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEE--CCCeEEeccC-----CCHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999988766788888 9999998776 478999999999999774
|
|
| >PRK10673 acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.3e-16 Score=153.13 Aligned_cols=232 Identities=13% Similarity=0.175 Sum_probs=138.1
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.+++.|-......++..|+ .+|.|+++|+.|++..-. ...+++.+++ +|+.++++++.
T Consensus 19 iv~lhG~~~~~~~~~~~~~~l~----~~~~vi~~D~~G~G~s~~--------------~~~~~~~~~~-~d~~~~l~~l~ 79 (255)
T PRK10673 19 IVLVHGLFGSLDNLGVLARDLV----NDHDIIQVDMRNHGLSPR--------------DPVMNYPAMA-QDLLDTLDALQ 79 (255)
T ss_pred EEEECCCCCchhHHHHHHHHHh----hCCeEEEECCCCCCCCCC--------------CCCCCHHHHH-HHHHHHHHHcC
Confidence 3443444444444455555555 689999999999865211 0135678886 99999998873
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhH
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAL 316 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
. ++++++||||||.+++.+|.++ +++|+++|+++++............. . .
T Consensus 80 ~------~~~~lvGhS~Gg~va~~~a~~~-----~~~v~~lvli~~~~~~~~~~~~~~~~-----------------~-~ 130 (255)
T PRK10673 80 I------EKATFIGHSMGGKAVMALTALA-----PDRIDKLVAIDIAPVDYHVRRHDEIF-----------------A-A 130 (255)
T ss_pred C------CceEEEEECHHHHHHHHHHHhC-----HhhcceEEEEecCCCCccchhhHHHH-----------------H-H
Confidence 3 2899999999999999999987 88999999997532111100000000 0 0
Q ss_pred HHHhcCC-CCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCC----cHHHHHHHHHHHhcCcccccCCccccccccC
Q 012210 317 LTAAYPL-SSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTI----PAKLILQLTTAFREGGLRDRGGKFFYKDHIH 391 (468)
Q Consensus 317 ~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 391 (468)
+...... ..........+.... ..+....+....+... ............ .....+.
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~ 192 (255)
T PRK10673 131 INAVSEAGATTRQQAAAIMRQHL------NEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHI------------VGWEKIP 192 (255)
T ss_pred HHHhhhcccccHHHHHHHHHHhc------CCHHHHHHHHhcCCcceeEeeHHHHHHhHHHH------------hCCcccC
Confidence 0000000 000000000110000 0111111111111000 000000000000 0123467
Q ss_pred ccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 392 KCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 392 ~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
++++|+|+|+|++|..++++..+.+.+.+++. +++++ ++++|+.+.+ .|+++.+.|.+||.++
T Consensus 193 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~--~~~~~--~~~gH~~~~~------~p~~~~~~l~~fl~~~ 255 (255)
T PRK10673 193 AWPHPALFIRGGNSPYVTEAYRDDLLAQFPQA--RAHVI--AGAGHWVHAE------KPDAVLRAIRRYLNDK 255 (255)
T ss_pred CCCCCeEEEECCCCCCCCHHHHHHHHHhCCCc--EEEEe--CCCCCeeecc------CHHHHHHHHHHHHhcC
Confidence 78999999999999999999999999999987 77777 8999999998 8999999999999863
|
|
| >TIGR03611 RutD pyrimidine utilization protein D | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.2e-16 Score=152.18 Aligned_cols=242 Identities=15% Similarity=0.170 Sum_probs=139.0
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|++.|-...+..+...| .+||+|+++|+.|++..... ....+++++++ +|+.++++++.
T Consensus 16 iv~lhG~~~~~~~~~~~~~~l----~~~~~vi~~D~~G~G~S~~~------------~~~~~~~~~~~-~~~~~~i~~~~ 78 (257)
T TIGR03611 16 VVLSSGLGGSGSYWAPQLDVL----TQRFHVVTYDHRGTGRSPGE------------LPPGYSIAHMA-DDVLQLLDALN 78 (257)
T ss_pred EEEEcCCCcchhHHHHHHHHH----HhccEEEEEcCCCCCCCCCC------------CcccCCHHHHH-HHHHHHHHHhC
Confidence 444444444444455555444 46899999999998763111 01234677776 88888887764
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhH
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAL 316 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
. .+++++||||||++++.++.++ +++|+++|++++......... ..... ........ ....+
T Consensus 79 ~------~~~~l~G~S~Gg~~a~~~a~~~-----~~~v~~~i~~~~~~~~~~~~~--~~~~~---~~~~~~~~--~~~~~ 140 (257)
T TIGR03611 79 I------ERFHFVGHALGGLIGLQLALRY-----PERLLSLVLINAWSRPDPHTR--RCFDV---RIALLQHA--GPEAY 140 (257)
T ss_pred C------CcEEEEEechhHHHHHHHHHHC-----hHHhHHheeecCCCCCChhHH--HHHHH---HHHHHhcc--Ccchh
Confidence 3 2899999999999999999987 789999999987544321110 00000 00000000 00000
Q ss_pred HHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCcc
Q 012210 317 LTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIP 396 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP 396 (468)
.......... ..|+... ....................+........ ..++...+.++++|
T Consensus 141 ~~~~~~~~~~----~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~i~~P 200 (257)
T TIGR03611 141 VHAQALFLYP----ADWISEN-------AARLAADEAHALAHFPGKANVLRRINALE---------AFDVSARLDRIQHP 200 (257)
T ss_pred hhhhhhhhcc----ccHhhcc-------chhhhhhhhhcccccCccHHHHHHHHHHH---------cCCcHHHhcccCcc
Confidence 0000000000 0011000 00000000000000001111111111111 11234567889999
Q ss_pred EEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 397 ILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 397 vLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
+|+++|++|.++|++.++++.+.+++. +++.+ +++||..+.+ .|+++.+.|.+||+.
T Consensus 201 ~l~i~g~~D~~~~~~~~~~~~~~~~~~--~~~~~--~~~gH~~~~~------~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 201 VLLIANRDDMLVPYTQSLRLAAALPNA--QLKLL--PYGGHASNVT------DPETFNRALLDFLKT 257 (257)
T ss_pred EEEEecCcCcccCHHHHHHHHHhcCCc--eEEEE--CCCCCCcccc------CHHHHHHHHHHHhcC
Confidence 999999999999999999999999987 77777 8999999987 999999999999963
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. |
| >TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Probab=99.74 E-value=6e-17 Score=153.01 Aligned_cols=216 Identities=20% Similarity=0.240 Sum_probs=129.4
Q ss_pred hhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHH
Q 012210 180 MIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLY 259 (468)
Q Consensus 180 ~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~ 259 (468)
.+.+||+|+++|+.|++.... ...++++.+++ +|+.++++.+.. .+++++||||||++++
T Consensus 35 ~l~~~~~v~~~d~~G~G~s~~-------------~~~~~~~~~~~-~~~~~~i~~~~~------~~v~liG~S~Gg~~a~ 94 (251)
T TIGR02427 35 ALTPDFRVLRYDKRGHGLSDA-------------PEGPYSIEDLA-DDVLALLDHLGI------ERAVFCGLSLGGLIAQ 94 (251)
T ss_pred HhhcccEEEEecCCCCCCCCC-------------CCCCCCHHHHH-HHHHHHHHHhCC------CceEEEEeCchHHHHH
Confidence 335799999999999865210 01244677776 888888877643 2899999999999999
Q ss_pred HHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCchhHHHHHHHhhh
Q 012210 260 AMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLIS 339 (468)
Q Consensus 260 ~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 339 (468)
.+|.++ |++|+++|+++++............+.... . ...... ....+..++.
T Consensus 95 ~~a~~~-----p~~v~~li~~~~~~~~~~~~~~~~~~~~~~-------~--~~~~~~-------------~~~~~~~~~~ 147 (251)
T TIGR02427 95 GLAARR-----PDRVRALVLSNTAAKIGTPESWNARIAAVR-------A--EGLAAL-------------ADAVLERWFT 147 (251)
T ss_pred HHHHHC-----HHHhHHHhhccCccccCchhhHHHHHhhhh-------h--ccHHHH-------------HHHHHHHHcc
Confidence 999886 889999999987543322111100000000 0 000000 0000000000
Q ss_pred cccc-CCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecCCCCcCCHHHHHHHHH
Q 012210 340 AEDM-MHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVK 418 (468)
Q Consensus 340 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~ 418 (468)
.... ........+. ......+...+......+. ..+....+.++++|+++++|++|.++|++..+.+.+
T Consensus 148 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~ 217 (251)
T TIGR02427 148 PGFREAHPARLDLYR-NMLVRQPPDGYAGCCAAIR---------DADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIAD 217 (251)
T ss_pred cccccCChHHHHHHH-HHHHhcCHHHHHHHHHHHh---------cccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHH
Confidence 0000 0111111111 0001111111111111111 112334577899999999999999999999999999
Q ss_pred hCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 012210 419 LLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 462 (468)
Q Consensus 419 ~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~ 462 (468)
.+++. +++.+ ++++|..+.+ .|+++.+.|.+||+
T Consensus 218 ~~~~~--~~~~~--~~~gH~~~~~------~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 218 LVPGA--RFAEI--RGAGHIPCVE------QPEAFNAALRDFLR 251 (251)
T ss_pred hCCCc--eEEEE--CCCCCccccc------ChHHHHHHHHHHhC
Confidence 99976 77877 8999999987 89999999999984
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. |
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.1e-16 Score=154.25 Aligned_cols=238 Identities=16% Similarity=0.146 Sum_probs=133.8
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|++.+-...++.+...|. ..|+|+++|+.|++..- .. -.+++++++ +++.+ +
T Consensus 16 ivllHG~~~~~~~w~~~~~~L~----~~~~vi~~Dl~G~G~S~----------~~----~~~~~~~~~-~~l~~----~- 71 (256)
T PRK10349 16 LVLLHGWGLNAEVWRCIDEELS----SHFTLHLVDLPGFGRSR----------GF----GALSLADMA-EAVLQ----Q- 71 (256)
T ss_pred EEEECCCCCChhHHHHHHHHHh----cCCEEEEecCCCCCCCC----------CC----CCCCHHHHH-HHHHh----c-
Confidence 4443444444455555666665 56999999999997521 11 013444443 33332 1
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhH
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAL 316 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
.. +++++|||||||.+++.+|.++ |++|+++|+++++......... ... . . .....+
T Consensus 72 ---~~--~~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lili~~~~~~~~~~~~-~~~---~-~--------~~~~~~ 128 (256)
T PRK10349 72 ---AP--DKAIWLGWSLGGLVASQIALTH-----PERVQALVTVASSPCFSARDEW-PGI---K-P--------DVLAGF 128 (256)
T ss_pred ---CC--CCeEEEEECHHHHHHHHHHHhC-----hHhhheEEEecCccceecCCCC-Ccc---c-H--------HHHHHH
Confidence 22 3899999999999999999987 8999999999874332111000 000 0 0 000000
Q ss_pred HHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhcc-CCCc-HHHHHHHHHHHhcCcccccCCccccccccCccC
Q 012210 317 LTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNF-CTIP-AKLILQLTTAFREGGLRDRGGKFFYKDHIHKCN 394 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~ 394 (468)
...+. ......+..++.......... ......+..... ...+ ..........+. ..++...+.+|+
T Consensus 129 ~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~l~~i~ 196 (256)
T PRK10349 129 QQQLS--DDFQRTVERFLALQTMGTETA-RQDARALKKTVLALPMPEVDVLNGGLEILK---------TVDLRQPLQNVS 196 (256)
T ss_pred HHHHH--hchHHHHHHHHHHHHccCchH-HHHHHHHHHHhhccCCCcHHHHHHHHHHHH---------hCccHHHHhhcC
Confidence 00000 000001111111110000000 011111100000 0111 111111111111 123446788999
Q ss_pred ccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 395 IPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 395 vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
+|+|+|+|++|.++|.+.++.+.+.++++ +++++ |++||+.+.+ +|+.|.+.|.+|-.+
T Consensus 197 ~P~lii~G~~D~~~~~~~~~~~~~~i~~~--~~~~i--~~~gH~~~~e------~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 197 MPFLRLYGYLDGLVPRKVVPMLDKLWPHS--ESYIF--AKAAHAPFIS------HPAEFCHLLVALKQR 255 (256)
T ss_pred CCeEEEecCCCccCCHHHHHHHHHhCCCC--eEEEe--CCCCCCcccc------CHHHHHHHHHHHhcc
Confidence 99999999999999999999999999988 88888 9999999998 999999999998543
|
|
| >KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.3e-16 Score=160.86 Aligned_cols=296 Identities=20% Similarity=0.234 Sum_probs=191.3
Q ss_pred cccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHH
Q 012210 156 SLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYI 235 (468)
Q Consensus 156 ~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l 235 (468)
||+.....+-+|..-+.++..|+ .+||.|+--..+| .+|...-..+.. ......|||++++++..|+++.|+++
T Consensus 81 GLl~sS~~Wv~n~p~~sLaf~La---daGYDVWLgN~RG--n~ySr~h~~l~~-~~~~~FW~FS~~Em~~yDLPA~IdyI 154 (403)
T KOG2624|consen 81 GLLASSSSWVLNGPEQSLAFLLA---DAGYDVWLGNNRG--NTYSRKHKKLSP-SSDKEFWDFSWHEMGTYDLPAMIDYI 154 (403)
T ss_pred ccccccccceecCccccHHHHHH---HcCCceeeecCcC--cccchhhcccCC-cCCcceeecchhhhhhcCHHHHHHHH
Confidence 34444455666777788999999 9999998655555 233322222221 12444699999999999999999999
Q ss_pred HhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccC----chh-hhcCC-C
Q 012210 236 RAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLA----DPA-QALNV-P 309 (468)
Q Consensus 236 ~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~----~~~-~~~~~-~ 309 (468)
....+.. +++.||||+|+.+.+.+++..+.. ..+|+.+++++|.............+.... ... ...+. .
T Consensus 155 L~~T~~~--kl~yvGHSQGtt~~fv~lS~~p~~--~~kI~~~~aLAP~~~~k~~~~~~~~~~~~~~~~~~~~~~~fg~~~ 230 (403)
T KOG2624|consen 155 LEKTGQE--KLHYVGHSQGTTTFFVMLSERPEY--NKKIKSFIALAPAAFPKHIKSLLNKFLDPFLGAFSLLPLLFGRKE 230 (403)
T ss_pred HHhcccc--ceEEEEEEccchhheehhcccchh--hhhhheeeeecchhhhcccccHHHHhhhhhhhhhhHHHHhcCCcc
Confidence 9998776 999999999999999999874111 247999999999885443222222111100 000 01111 1
Q ss_pred CcchHhHHHHhcC-CCC---CchhHHHHHHHhhhcccc--CCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCc
Q 012210 310 VVPLGALLTAAYP-LSS---SPPYVFSWLNNLISAEDM--MHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGK 383 (468)
Q Consensus 310 ~~~~~~~~~~~~~-~~~---~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (468)
..+...++..+.. .+. ....++..+-......+. .+......++......+..+.+.+|.+..+.+.|+.++-.
T Consensus 231 f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~~n~~~~~~~~~h~pagtSvk~~~H~~Q~~~s~~f~~yD~G 310 (403)
T KOG2624|consen 231 FLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSNNWNTTLLPVYLAHLPAGTSVKNIVHWAQIVRSGKFRKYDYG 310 (403)
T ss_pred ccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHhhhhcccchhhccCCCCccHHHHHHHHHHhcCCCccccCCC
Confidence 2222222221111 111 112233332222222111 1111111234444566777899999999999999887532
Q ss_pred c-----cc------ccccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhh
Q 012210 384 F-----FY------KDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQ 452 (468)
Q Consensus 384 ~-----~~------~~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~ 452 (468)
. .| .-.+.+|++|+.+.+|+.|.++.++.+..+....+++.....+ ...+|.|+||+||.+++++
T Consensus 311 ~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~DV~~~~~~~~~~~~~~~~----~~~~ynHlDFi~g~da~~~ 386 (403)
T KOG2624|consen 311 SKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPEDVLILLLVLPNSVIKYIV----PIPEYNHLDFIWGLDAKEE 386 (403)
T ss_pred ccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHHHHHHHHHhcccccccccc----cCCCccceeeeeccCcHHH
Confidence 2 11 1267889999999999999999999999999998887442222 2489999999999999999
Q ss_pred HHHHHHHHHhhcc
Q 012210 453 VYPCIVQFLGRYD 465 (468)
Q Consensus 453 v~~~I~~FL~~~~ 465 (468)
+++.|++.++...
T Consensus 387 vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 387 VYDPVIERLRLFE 399 (403)
T ss_pred HHHHHHHHHHhhh
Confidence 9999999998654
|
|
| >PRK07581 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.6e-16 Score=159.85 Aligned_cols=260 Identities=16% Similarity=0.141 Sum_probs=135.4
Q ss_pred hcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCc-EEEEEEehhHHHHHH
Q 012210 182 EEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGK-LLAIGHSMGGILLYA 260 (468)
Q Consensus 182 ~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~-v~lvGhS~GG~ia~~ 260 (468)
.++|+||+||+.|++..-.... .......-+|....+. +|+.+....+....+.. + +++|||||||++++.
T Consensus 69 ~~~~~vi~~D~~G~G~S~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~lgi~--~~~~lvG~S~GG~va~~ 140 (339)
T PRK07581 69 PEKYFIIIPNMFGNGLSSSPSN-----TPAPFNAARFPHVTIY-DNVRAQHRLLTEKFGIE--RLALVVGWSMGAQQTYH 140 (339)
T ss_pred cCceEEEEecCCCCCCCCCCCC-----CCCCCCCCCCCceeHH-HHHHHHHHHHHHHhCCC--ceEEEEEeCHHHHHHHH
Confidence 5799999999999976311100 0000000011122233 67766555565555655 8 579999999999999
Q ss_pred HHHhcCCCCCcccccceeEEccccccCCchhhH-Hhhc-cc-Cchhhhc-CCCCcchHhHHHHhcCCCCCchhHHHHHHH
Q 012210 261 MLSRCGFEGRESRLAAIVTLASSLDYTSSKSTL-KLLL-PL-ADPAQAL-NVPVVPLGALLTAAYPLSSSPPYVFSWLNN 336 (468)
Q Consensus 261 ~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~-~~~~-~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 336 (468)
+|.+| |++|+++|++++........... .... .+ .++.... .....+... +...........+...++..
T Consensus 141 ~a~~~-----P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 214 (339)
T PRK07581 141 WAVRY-----PDMVERAAPIAGTAKTTPHNFVFLEGLKAALTADPAFNGGWYAEPPERG-LRAHARVYAGWGFSQAFYRQ 214 (339)
T ss_pred HHHHC-----HHHHhhheeeecCCCCCHHHHHHHHHHHHHHHhCCCCCCCCCCCcHHHH-HHHHHHHHHHHHhHHHHHHh
Confidence 99998 99999999998755422111000 0000 00 0000000 000000000 00000000000000011110
Q ss_pred h-hhccccCC-HHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCC-ccccccccCccCccEEEEecCCCCcCCHHHH
Q 012210 337 L-ISAEDMMH-PELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGG-KFFYKDHIHKCNIPILAIAGDQDLICPPEAV 413 (468)
Q Consensus 337 ~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~I~vPvLiI~G~~D~ivp~~~~ 413 (468)
. ........ .+.+...............+......+....+..... ..++...+.+|+||+|+|+|++|.++|++.+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~ 294 (339)
T PRK07581 215 ELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDC 294 (339)
T ss_pred hhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHH
Confidence 0 00000000 1222222211111111112222221111111100000 1234567889999999999999999999999
Q ss_pred HHHHHhCCCCceeEEEecCCC-CCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 414 EETVKLLPEDLVTYKVFGEPS-GPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 414 ~~l~~~ip~~~~~~~v~~~~~-agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
+.+.+.++++ +++++ ++ +||..+.+ +++++...|.+||++..
T Consensus 295 ~~l~~~ip~a--~l~~i--~~~~GH~~~~~------~~~~~~~~~~~~~~~~~ 337 (339)
T PRK07581 295 EAEAALIPNA--ELRPI--ESIWGHLAGFG------QNPADIAFIDAALKELL 337 (339)
T ss_pred HHHHHhCCCC--eEEEe--CCCCCcccccc------CcHHHHHHHHHHHHHHH
Confidence 9999999987 88888 88 89999998 89999999999998763
|
|
| >PRK06489 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.5e-16 Score=161.46 Aligned_cols=71 Identities=21% Similarity=0.311 Sum_probs=62.3
Q ss_pred cccccCccCccEEEEecCCCCcCCHHHH--HHHHHhCCCCceeEEEecCCCC----CCCCcccccccccchhhHHHHHHH
Q 012210 386 YKDHIHKCNIPILAIAGDQDLICPPEAV--EETVKLLPEDLVTYKVFGEPSG----PHYAHYDLVGGRMAVEQVYPCIVQ 459 (468)
Q Consensus 386 ~~~~l~~I~vPvLiI~G~~D~ivp~~~~--~~l~~~ip~~~~~~~v~~~~~a----gH~~H~e~~~~~~~pe~v~~~I~~ 459 (468)
....+.+|++|+|+|+|++|.++|++.+ +.+.+.+|++ +++++ |++ ||..| + +|+++.+.|.+
T Consensus 284 ~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a--~l~~i--~~a~~~~GH~~~-e------~P~~~~~~i~~ 352 (360)
T PRK06489 284 PSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKHG--RLVLI--PASPETRGHGTT-G------SAKFWKAYLAE 352 (360)
T ss_pred hHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcCC--eEEEE--CCCCCCCCcccc-c------CHHHHHHHHHH
Confidence 4567899999999999999999999875 7899999987 88888 775 89887 6 89999999999
Q ss_pred HHhhccCC
Q 012210 460 FLGRYDSV 467 (468)
Q Consensus 460 FL~~~~~~ 467 (468)
||+++.++
T Consensus 353 FL~~~~~~ 360 (360)
T PRK06489 353 FLAQVPKR 360 (360)
T ss_pred HHHhcccC
Confidence 99987653
|
|
| >PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.4e-17 Score=153.64 Aligned_cols=201 Identities=24% Similarity=0.327 Sum_probs=130.6
Q ss_pred cccccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHH
Q 012210 154 LSSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAME 233 (468)
Q Consensus 154 ~~~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~ 233 (468)
.+.++..++..|++++++.++++|+ .+||.|++||+|+...........-....... ..+ ..+.. ..|+.++++
T Consensus 14 ~~~Vvv~~d~~G~~~~~~~~ad~lA---~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~-~~~~~aa~~ 87 (218)
T PF01738_consen 14 RPAVVVIHDIFGLNPNIRDLADRLA---EEGYVVLAPDLFGGRGAPPSDPEEAFAAMREL-FAP-RPEQV-AADLQAAVD 87 (218)
T ss_dssp EEEEEEE-BTTBS-HHHHHHHHHHH---HTT-EEEEE-CCCCTS--CCCHHCHHHHHHHC-HHH-SHHHH-HHHHHHHHH
T ss_pred CCEEEEEcCCCCCchHHHHHHHHHH---hcCCCEEecccccCCCCCccchhhHHHHHHHH-Hhh-hHHHH-HHHHHHHHH
Confidence 4667888999999999999999999 99999999999997661111111100000000 001 12344 489999999
Q ss_pred HHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcch
Q 012210 234 YIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPL 313 (468)
Q Consensus 234 ~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (468)
+|+.+.....++|.++|+||||.+++.++.. .+.+++.|...|.....
T Consensus 88 ~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~------~~~~~a~v~~yg~~~~~-------------------------- 135 (218)
T PF01738_consen 88 YLRAQPEVDPGKIGVVGFCWGGKLALLLAAR------DPRVDAAVSFYGGSPPP-------------------------- 135 (218)
T ss_dssp HHHCTTTCEEEEEEEEEETHHHHHHHHHHCC------TTTSSEEEEES-SSSGG--------------------------
T ss_pred HHHhccccCCCcEEEEEEecchHHhhhhhhh------ccccceEEEEcCCCCCC--------------------------
Confidence 9999875555699999999999999999976 56788888876510000
Q ss_pred HhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCcc
Q 012210 314 GALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKC 393 (468)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I 393 (468)
. ......++
T Consensus 136 --------------------------------~---------------------------------------~~~~~~~~ 144 (218)
T PF01738_consen 136 --------------------------------P---------------------------------------PLEDAPKI 144 (218)
T ss_dssp --------------------------------G---------------------------------------HHHHGGG-
T ss_pred --------------------------------c---------------------------------------chhhhccc
Confidence 0 00224568
Q ss_pred CccEEEEecCCCCcCCHHHHHHHHHhCC--CCceeEEEecCCCCCCCCccccc--ccccchhhHHHHHHHHHhhcc
Q 012210 394 NIPILAIAGDQDLICPPEAVEETVKLLP--EDLVTYKVFGEPSGPHYAHYDLV--GGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 394 ~vPvLiI~G~~D~ivp~~~~~~l~~~ip--~~~~~~~v~~~~~agH~~H~e~~--~~~~~pe~v~~~I~~FL~~~~ 465 (468)
++|+|+++|++|..+|.+..+.+.+.+. +...+++++ |+++|.....-- ..+.+.++.++.+.+||+++.
T Consensus 145 ~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y--~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 145 KAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVY--PGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp -S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEE--TT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC--
T ss_pred CCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEEC--CCCcccccCCCCcccCHHHHHHHHHHHHHHHHhcC
Confidence 8999999999999999998888887772 335577777 889995554322 234466788999999999874
|
Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A. |
| >KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.7e-16 Score=152.95 Aligned_cols=257 Identities=17% Similarity=0.191 Sum_probs=145.2
Q ss_pred ccccccch---hhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhc
Q 012210 163 SSAIAIQI---RDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQS 239 (468)
Q Consensus 163 ~~G~~~~i---~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~ 239 (468)
-||...-. +.....|+ ..||+|+|||+.|.+.. .......+|+...++ .|+.++++.|..+
T Consensus 50 lHGfPe~wyswr~q~~~la---~~~~rviA~DlrGyG~S-----------d~P~~~~~Yt~~~l~-~di~~lld~Lg~~- 113 (322)
T KOG4178|consen 50 LHGFPESWYSWRHQIPGLA---SRGYRVIAPDLRGYGFS-----------DAPPHISEYTIDELV-GDIVALLDHLGLK- 113 (322)
T ss_pred EccCCccchhhhhhhhhhh---hcceEEEecCCCCCCCC-----------CCCCCcceeeHHHHH-HHHHHHHHHhccc-
Confidence 45555444 44445555 89999999999998652 111122466888886 9999999999744
Q ss_pred CCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhccc-Cchhhh--cCCCCcchHhH
Q 012210 240 KPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPL-ADPAQA--LNVPVVPLGAL 316 (468)
Q Consensus 240 ~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~ 316 (468)
+++++||+||+++++.+|..+ |++|+++|+++.+....... ........ .+.... ...+..+..
T Consensus 114 -----k~~lvgHDwGaivaw~la~~~-----Perv~~lv~~nv~~~~p~~~-~~~~~~~~f~~~~y~~~fQ~~~~~E~-- 180 (322)
T KOG4178|consen 114 -----KAFLVGHDWGAIVAWRLALFY-----PERVDGLVTLNVPFPNPKLK-PLDSSKAIFGKSYYICLFQEPGKPET-- 180 (322)
T ss_pred -----eeEEEeccchhHHHHHHHHhC-----hhhcceEEEecCCCCCcccc-hhhhhccccCccceeEeccccCcchh--
Confidence 999999999999999999998 99999999998766521111 11100000 000000 000000000
Q ss_pred HHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCcc-----cc---cc
Q 012210 317 LTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKF-----FY---KD 388 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---~~ 388 (468)
.+.... .......++.. ....+...........+-....-+..+...+..+.|....|.. .+ ..
T Consensus 181 ---~~s~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~ 252 (322)
T KOG4178|consen 181 ---ELSKDD----TEMLVKTFRTR-KTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPW 252 (322)
T ss_pred ---hhccch----hHHhHHhhhcc-ccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchhccc
Confidence 000000 00000000000 0000000000000000001112222333333333333332221 11 23
Q ss_pred ccCccCccEEEEecCCCCcCCHH-HHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 389 HIHKCNIPILAIAGDQDLICPPE-AVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 389 ~l~~I~vPvLiI~G~~D~ivp~~-~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
.+.+|++|+++|+|+.|.+.+.. ....+.+.+++.. +.+++ +++||+.+.| .|++|.+.|.+||++..
T Consensus 253 ~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~-~~vv~--~~~gH~vqqe------~p~~v~~~i~~f~~~~~ 321 (322)
T KOG4178|consen 253 ALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLT-ERVVI--EGIGHFVQQE------KPQEVNQAILGFINSFS 321 (322)
T ss_pred cccccccceEEEEecCcccccchhHHHHHHHhhcccc-ceEEe--cCCccccccc------CHHHHHHHHHHHHHhhc
Confidence 57789999999999999998866 5677778888753 34444 8999999998 99999999999999764
|
|
| >PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.2e-16 Score=163.97 Aligned_cols=246 Identities=15% Similarity=0.196 Sum_probs=129.8
Q ss_pred HHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHH-HHHHHHHhhcCCCCCcEEEEEEeh
Q 012210 175 QNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVP-AAMEYIRAQSKPKDGKLLAIGHSM 253 (468)
Q Consensus 175 ~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~-a~i~~l~~~~~~~~~~v~lvGhS~ 253 (468)
..++.....||+|+++|+.|++..-.. . ...|++++++ +|+. ++++.+ +.. +++++||||
T Consensus 223 ~~L~~~~~~~yrVia~Dl~G~G~S~~p--------~----~~~ytl~~~a-~~l~~~ll~~l----g~~--k~~LVGhSm 283 (481)
T PLN03087 223 PNFSDAAKSTYRLFAVDLLGFGRSPKP--------A----DSLYTLREHL-EMIERSVLERY----KVK--SFHIVAHSL 283 (481)
T ss_pred HHHHHHhhCCCEEEEECCCCCCCCcCC--------C----CCcCCHHHHH-HHHHHHHHHHc----CCC--CEEEEEECH
Confidence 344433357999999999999763110 0 1235677775 6663 555544 333 999999999
Q ss_pred hHHHHHHHHHhcCCCCCcccccceeEEccccccCCchh-hHHhhcccCchhhhcCCCCcchHhHHHHhcC----C----C
Q 012210 254 GGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKS-TLKLLLPLADPAQALNVPVVPLGALLTAAYP----L----S 324 (468)
Q Consensus 254 GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~----~ 324 (468)
||++++.+|.+| |++|+++|+++++........ .............. .+....+.....++. . .
T Consensus 284 GG~iAl~~A~~~-----Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~w~~~~~~~~~~~~ 356 (481)
T PLN03087 284 GCILALALAVKH-----PGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRV--WPPIAFGASVACWYEHISRTICLVI 356 (481)
T ss_pred HHHHHHHHHHhC-----hHhccEEEEECCCccccccchhHHHHHHHHhccccc--CCccccchhHHHHHHHHHhhhhccc
Confidence 999999999998 899999999987654322110 00000000000000 000000111100000 0 0
Q ss_pred CCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecCC
Q 012210 325 SSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQ 404 (468)
Q Consensus 325 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~ 404 (468)
........++........ ........+. ..........+.......... ........+.+|++|+|+|+|++
T Consensus 357 ~~~~~~~~~~~~l~~~~~-~~~~l~~~~~----~~~~~~~~~~l~~~i~~~~~~---l~~~l~~l~~~I~vPtLII~Ge~ 428 (481)
T PLN03087 357 CKNHRLWEFLTRLLTRNR-MRTFLIEGFF----CHTHNAAWHTLHNIICGSGSK---LDGYLDHVRDQLKCDVAIFHGGD 428 (481)
T ss_pred ccchHHHHHHHHHhhhhh-hhHHHHHHHH----hccchhhHHHHHHHHhchhhh---hhhHHHHHHHhCCCCEEEEEECC
Confidence 000000011000000000 0000000000 000000000000001000000 00001122346999999999999
Q ss_pred CCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcc-cccccccchhhHHHHHHHHHhhc
Q 012210 405 DLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHY-DLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 405 D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~-e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
|.++|++.++.+.+.+|++ +++++ +++||+.+. + .|+++++.|.+|.+.-
T Consensus 429 D~ivP~~~~~~la~~iP~a--~l~vI--~~aGH~~~v~e------~p~~fa~~L~~F~~~~ 479 (481)
T PLN03087 429 DELIPVECSYAVKAKVPRA--RVKVI--DDKDHITIVVG------RQKEFARELEEIWRRS 479 (481)
T ss_pred CCCCCHHHHHHHHHhCCCC--EEEEe--CCCCCcchhhc------CHHHHHHHHHHHhhcc
Confidence 9999999999999999987 88888 999999886 6 8999999999998653
|
|
| >TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.4e-16 Score=146.67 Aligned_cols=245 Identities=16% Similarity=0.183 Sum_probs=132.6
Q ss_pred cccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhh-HHHHHHHHH
Q 012210 158 LERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEED-VPAAMEYIR 236 (468)
Q Consensus 158 l~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D-~~a~i~~l~ 236 (468)
+-.|.+.|-...++.+++.|+ +||.|+++|+.|++..-.. .....+++++++ +| +..+++.+
T Consensus 5 v~~hG~~~~~~~~~~~~~~L~----~~~~v~~~d~~g~G~s~~~-----------~~~~~~~~~~~~-~~~~~~~~~~~- 67 (251)
T TIGR03695 5 VFLHGFLGSGADWQALIELLG----PHFRCLAIDLPGHGSSQSP-----------DEIERYDFEEAA-QDILATLLDQL- 67 (251)
T ss_pred EEEcCCCCchhhHHHHHHHhc----ccCeEEEEcCCCCCCCCCC-----------CccChhhHHHHH-HHHHHHHHHHc-
Confidence 333444445555566666554 7999999999998653110 001123455554 44 33333333
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhH
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAL 316 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
+. ++++++||||||.+++.+|.++ |..|++++++++.................. .
T Consensus 68 ---~~--~~~~l~G~S~Gg~ia~~~a~~~-----~~~v~~lil~~~~~~~~~~~~~~~~~~~~~---------------~ 122 (251)
T TIGR03695 68 ---GI--EPFFLVGYSMGGRIALYYALQY-----PERVQGLILESGSPGLATEEERAARRQNDE---------------Q 122 (251)
T ss_pred ---CC--CeEEEEEeccHHHHHHHHHHhC-----chheeeeEEecCCCCcCchHhhhhhhhcch---------------h
Confidence 33 3899999999999999999997 888999999987544322111000000000 0
Q ss_pred HHHhcCCCCCchhHHHHHHH-hhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCc
Q 012210 317 LTAAYPLSSSPPYVFSWLNN-LISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNI 395 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~v 395 (468)
+...+.......+...+... .+.............+........+......+.. ... . ...++...+.++++
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~---~~~~~~~~~~~~~~ 195 (251)
T TIGR03695 123 LAQRFEQEGLEAFLDDWYQQPLFASQKNLPPEQRQALRAKRLANNPEGLAKMLRA-TGL---G---KQPSLWPKLQALTI 195 (251)
T ss_pred hhhHHHhcCccHHHHHHhcCceeeecccCChHHhHHHHHhcccccchHHHHHHHH-hhh---h---cccchHHHhhCCCC
Confidence 00000000000011111100 0000000122222222222111222111111111 100 0 11122345678999
Q ss_pred cEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 012210 396 PILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 462 (468)
Q Consensus 396 PvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~ 462 (468)
|+|+++|++|..++ +..+.+.+.+++. +++.+ |+++|+.+.+ .|+++.+.|.+||+
T Consensus 196 P~l~i~g~~D~~~~-~~~~~~~~~~~~~--~~~~~--~~~gH~~~~e------~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 196 PVLYLCGEKDEKFV-QIAKEMQKLLPNL--TLVII--ANAGHNIHLE------NPEAFAKILLAFLE 251 (251)
T ss_pred ceEEEeeCcchHHH-HHHHHHHhcCCCC--cEEEE--cCCCCCcCcc------ChHHHHHHHHHHhC
Confidence 99999999998774 5677788888876 77777 8999999998 89999999999984
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. |
| >TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.5e-16 Score=146.63 Aligned_cols=237 Identities=16% Similarity=0.127 Sum_probs=130.9
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|++.+-...++.+++.|+ ++|+|+++|+.|++.... . .++++++++ +++.+
T Consensus 7 iv~~HG~~~~~~~~~~~~~~l~----~~~~vi~~d~~G~G~s~~----------~----~~~~~~~~~-~~~~~------ 61 (245)
T TIGR01738 7 LVLIHGWGMNAEVFRCLDEELS----AHFTLHLVDLPGHGRSRG----------F----GPLSLADAA-EAIAA------ 61 (245)
T ss_pred EEEEcCCCCchhhHHHHHHhhc----cCeEEEEecCCcCccCCC----------C----CCcCHHHHH-HHHHH------
Confidence 3443444444444555555554 689999999999866211 0 112344443 33332
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhH
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAL 316 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
... ++++++||||||.+++.+|.++ |+++.++|++++...+......... ........+
T Consensus 62 -~~~---~~~~lvG~S~Gg~~a~~~a~~~-----p~~v~~~il~~~~~~~~~~~~~~~~------------~~~~~~~~~ 120 (245)
T TIGR01738 62 -QAP---DPAIWLGWSLGGLVALHIAATH-----PDRVRALVTVASSPCFSAREDWPEG------------IKPDVLTGF 120 (245)
T ss_pred -hCC---CCeEEEEEcHHHHHHHHHHHHC-----HHhhheeeEecCCcccccCCccccc------------CCHHHHHHH
Confidence 211 3899999999999999999987 8889999999775433211100000 000000000
Q ss_pred HHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhc-cCCCc-HHHHHHHHHHHhcCcccccCCccccccccCccC
Q 012210 317 LTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNN-FCTIP-AKLILQLTTAFREGGLRDRGGKFFYKDHIHKCN 394 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~ 394 (468)
...+. ......+..++........ ........+.... ....+ ...+......+. ..+....+.+|+
T Consensus 121 ~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~l~~i~ 188 (245)
T TIGR01738 121 QQQLS--DDYQRTIERFLALQTLGTP-TARQDARALKQTLLARPTPNVQVLQAGLEILA---------TVDLRQPLQNIS 188 (245)
T ss_pred HHHhh--hhHHHHHHHHHHHHHhcCC-ccchHHHHHHHHhhccCCCCHHHHHHHHHHhh---------cccHHHHHhcCC
Confidence 00000 0000001111110000000 0011111111000 00111 111111111111 112345678899
Q ss_pred ccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHH
Q 012210 395 IPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFL 461 (468)
Q Consensus 395 vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL 461 (468)
+|+|+++|++|.++|++..+.+.+.+++. +++++ +++||+.+++ +|+++.+.|.+|+
T Consensus 189 ~Pvlii~g~~D~~~~~~~~~~~~~~~~~~--~~~~~--~~~gH~~~~e------~p~~~~~~i~~fi 245 (245)
T TIGR01738 189 VPFLRLYGYLDGLVPAKVVPYLDKLAPHS--ELYIF--AKAAHAPFLS------HAEAFCALLVAFK 245 (245)
T ss_pred CCEEEEeecCCcccCHHHHHHHHHhCCCC--eEEEe--CCCCCCcccc------CHHHHHHHHHhhC
Confidence 99999999999999999999999999976 78887 8999999998 9999999999996
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria. |
| >PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.5e-17 Score=152.85 Aligned_cols=217 Identities=18% Similarity=0.276 Sum_probs=130.0
Q ss_pred ccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCC
Q 012210 165 AIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDG 244 (468)
Q Consensus 165 G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~ 244 (468)
+-...+..+++.|+ +||.|+++|++|++...... . ...+++++++ +|+.++++.+.. +
T Consensus 9 ~~~~~~~~~~~~l~----~~~~v~~~d~~G~G~s~~~~-------~----~~~~~~~~~~-~~l~~~l~~~~~------~ 66 (228)
T PF12697_consen 9 GSSESWDPLAEALA----RGYRVIAFDLPGHGRSDPPP-------D----YSPYSIEDYA-EDLAELLDALGI------K 66 (228)
T ss_dssp TTGGGGHHHHHHHH----TTSEEEEEECTTSTTSSSHS-------S----GSGGSHHHHH-HHHHHHHHHTTT------S
T ss_pred CCHHHHHHHHHHHh----CCCEEEEEecCCcccccccc-------c----cCCcchhhhh-hhhhhccccccc------c
Confidence 33345555666554 79999999999987632111 0 1133566776 788887777655 2
Q ss_pred cEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCch--hhHHhhcccCchhhhcCCCCcchHhHHHHhcC
Q 012210 245 KLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSK--STLKLLLPLADPAQALNVPVVPLGALLTAAYP 322 (468)
Q Consensus 245 ~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (468)
+++++|||+||.+++.++.++ |++|+++|+++++....... .... .++..+..
T Consensus 67 ~~~lvG~S~Gg~~a~~~a~~~-----p~~v~~~vl~~~~~~~~~~~~~~~~~--------------------~~~~~~~~ 121 (228)
T PF12697_consen 67 KVILVGHSMGGMIALRLAARY-----PDRVKGLVLLSPPPPLPDSPSRSFGP--------------------SFIRRLLA 121 (228)
T ss_dssp SEEEEEETHHHHHHHHHHHHS-----GGGEEEEEEESESSSHHHHHCHHHHH--------------------HHHHHHHH
T ss_pred ccccccccccccccccccccc-----ccccccceeecccccccccccccccc--------------------hhhhhhhh
Confidence 999999999999999999987 88999999999877543211 0000 00100000
Q ss_pred CCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEec
Q 012210 323 LSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAG 402 (468)
Q Consensus 323 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G 402 (468)
.. ......+....+.. ....+........ ....+..+.... ....++...+.++++|+++++|
T Consensus 122 ~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~-----~~~~~~~~~~~~--------~~~~~~~~~~~~~~~pvl~i~g 184 (228)
T PF12697_consen 122 WR--SRSLRRLASRFFYR--WFDGDEPEDLIRS-----SRRALAEYLRSN--------LWQADLSEALPRIKVPVLVIHG 184 (228)
T ss_dssp HH--HHHHHHHHHHHHHH--HHTHHHHHHHHHH-----HHHHHHHHHHHH--------HHHHHHHHHHHGSSSEEEEEEE
T ss_pred cc--cccccccccccccc--ccccccccccccc-----cccccccccccc--------cccccccccccccCCCeEEeec
Confidence 00 00000000000000 0011111111111 111111111110 0011233567888999999999
Q ss_pred CCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHH
Q 012210 403 DQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYP 455 (468)
Q Consensus 403 ~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~ 455 (468)
++|.+++.+..+.+.+.+++. +++++ ++++|+.+.+ +|++|.+
T Consensus 185 ~~D~~~~~~~~~~~~~~~~~~--~~~~~--~~~gH~~~~~------~p~~~~~ 227 (228)
T PF12697_consen 185 EDDPIVPPESAEELADKLPNA--ELVVI--PGAGHFLFLE------QPDEVAE 227 (228)
T ss_dssp TTSSSSHHHHHHHHHHHSTTE--EEEEE--TTSSSTHHHH------SHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHCCCC--EEEEE--CCCCCccHHH------CHHHHhc
Confidence 999999999999999999975 88888 8999999998 8888765
|
... |
| >TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.2e-16 Score=151.05 Aligned_cols=248 Identities=17% Similarity=0.190 Sum_probs=136.7
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|.+.|-...++.+...|+ ++|+|+++|+.|++..-.. ....++++.++ +|+.++++.+.
T Consensus 31 vv~~hG~~~~~~~~~~~~~~l~----~~~~vi~~D~~G~G~S~~~------------~~~~~~~~~~~-~~l~~~i~~~~ 93 (278)
T TIGR03056 31 LLLLHGTGASTHSWRDLMPPLA----RSFRVVAPDLPGHGFTRAP------------FRFRFTLPSMA-EDLSALCAAEG 93 (278)
T ss_pred EEEEcCCCCCHHHHHHHHHHHh----hCcEEEeecCCCCCCCCCc------------cccCCCHHHHH-HHHHHHHHHcC
Confidence 4443444444444455555554 6899999999998652110 01234677776 88888777653
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhH
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAL 316 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
.+ +++++||||||++++.+|.++ |.+++++|++++......... ....+..... ....+. ...+
T Consensus 94 ----~~--~~~lvG~S~Gg~~a~~~a~~~-----p~~v~~~v~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~--~~~~ 157 (278)
T TIGR03056 94 ----LS--PDGVIGHSAGAAIALRLALDG-----PVTPRMVVGINAALMPFEGMA--GTLFPYMARV-LACNPF--TPPM 157 (278)
T ss_pred ----CC--CceEEEECccHHHHHHHHHhC-----CcccceEEEEcCccccccccc--ccccchhhHh-hhhccc--chHH
Confidence 22 899999999999999999987 788999999987543211100 0000000000 000000 0000
Q ss_pred HHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCcc
Q 012210 317 LTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIP 396 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP 396 (468)
...... ....+..++.. .....+..... .+..... .+ .........+.... .......+++|++|
T Consensus 158 ~~~~~~---~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~-~~-~~~~~~~~~~~~~~------~~~~~~~~~~i~~P 222 (278)
T TIGR03056 158 MSRGAA---DQQRVERLIRD---TGSLLDKAGMT-YYGRLIR-SP-AHVDGALSMMAQWD------LAPLNRDLPRITIP 222 (278)
T ss_pred HHhhcc---cCcchhHHhhc---cccccccchhh-HHHHhhc-Cc-hhhhHHHHHhhccc------ccchhhhcccCCCC
Confidence 000000 00000001000 00000111000 0000000 00 00000011110000 00123457889999
Q ss_pred EEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 012210 397 ILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 462 (468)
Q Consensus 397 vLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~ 462 (468)
+|+|+|++|.++|++.++.+.+.+++. +++.+ +++||+.+.+ .|+++.+.|.+|++
T Consensus 223 ~lii~g~~D~~vp~~~~~~~~~~~~~~--~~~~~--~~~gH~~~~e------~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 223 LHLIAGEEDKAVPPDESKRAATRVPTA--TLHVV--PGGGHLVHEE------QADGVVGLILQAAE 278 (278)
T ss_pred EEEEEeCCCcccCHHHHHHHHHhccCC--eEEEE--CCCCCccccc------CHHHHHHHHHHHhC
Confidence 999999999999999999999999987 77877 8999999998 89999999999985
|
Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity. |
| >PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=8.4e-16 Score=146.46 Aligned_cols=214 Identities=11% Similarity=0.110 Sum_probs=119.1
Q ss_pred cCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHH
Q 012210 183 EGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAML 262 (468)
Q Consensus 183 ~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a 262 (468)
.+|+|+++|++|++..-.. . ..++++++ +|+.++++.+.. ++++++||||||.+++.+|
T Consensus 26 ~~~~vi~~D~~G~G~S~~~----------~----~~~~~~~~-~~l~~~l~~~~~------~~~~lvG~S~Gg~va~~~a 84 (242)
T PRK11126 26 PDYPRLYIDLPGHGGSAAI----------S----VDGFADVS-RLLSQTLQSYNI------LPYWLVGYSLGGRIAMYYA 84 (242)
T ss_pred CCCCEEEecCCCCCCCCCc----------c----ccCHHHHH-HHHHHHHHHcCC------CCeEEEEECHHHHHHHHHH
Confidence 4799999999999763110 0 11566776 888888876532 3999999999999999999
Q ss_pred HhcCCCCCccc-ccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCchhHHHHHHH-hhhc
Q 012210 263 SRCGFEGRESR-LAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNN-LISA 340 (468)
Q Consensus 263 ~~~~~~~~p~~-V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~ 340 (468)
.++ +++ |+++|++++............... ... .+...+...........++.. .+..
T Consensus 85 ~~~-----~~~~v~~lvl~~~~~~~~~~~~~~~~~~--~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (242)
T PRK11126 85 CQG-----LAGGLCGLIVEGGNPGLQNAEERQARWQ--NDR-------------QWAQRFRQEPLEQVLADWYQQPVFAS 144 (242)
T ss_pred HhC-----CcccccEEEEeCCCCCCCCHHHHHHHHh--hhH-------------HHHHHhccCcHHHHHHHHHhcchhhc
Confidence 987 554 999999876544332211100000 000 000000000000111111110 0000
Q ss_pred cccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecCCCCcCCHHHHHHHHHhC
Q 012210 341 EDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLL 420 (468)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~i 420 (468)
........+....... .......+..... +. ...++...+.+|+||+|+|+|++|.++. .+.+.
T Consensus 145 ---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~---~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~- 208 (242)
T PRK11126 145 ---LNAEQRQQLVAKRSNN-NGAAVAAMLEATS---LA---KQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQ- 208 (242)
T ss_pred ---cCccHHHHHHHhcccC-CHHHHHHHHHhcC---cc---cCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHH-
Confidence 1111111111111111 1111111111110 00 1123445788999999999999998653 23333
Q ss_pred CCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 421 PEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 421 p~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
.+. +++++ +++||+.|.+ .|+++.+.|.+||++
T Consensus 209 ~~~--~~~~i--~~~gH~~~~e------~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 209 LAL--PLHVI--PNAGHNAHRE------NPAAFAASLAQILRL 241 (242)
T ss_pred hcC--eEEEe--CCCCCchhhh------ChHHHHHHHHHHHhh
Confidence 244 78887 9999999998 999999999999975
|
|
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.4e-16 Score=158.91 Aligned_cols=231 Identities=15% Similarity=0.179 Sum_probs=128.6
Q ss_pred hcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCc-EEEEEEehhHHHHHH
Q 012210 182 EEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGK-LLAIGHSMGGILLYA 260 (468)
Q Consensus 182 ~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~-v~lvGhS~GG~ia~~ 260 (468)
..+|+|+++|+.|++... . ..++..+++ +|+.++++.+... + ++++||||||++++.
T Consensus 97 ~~~~~Vi~~Dl~G~g~s~----~-----------~~~~~~~~a-~dl~~ll~~l~l~------~~~~lvG~SmGG~vA~~ 154 (343)
T PRK08775 97 PARFRLLAFDFIGADGSL----D-----------VPIDTADQA-DAIALLLDALGIA------RLHAFVGYSYGALVGLQ 154 (343)
T ss_pred ccccEEEEEeCCCCCCCC----C-----------CCCCHHHHH-HHHHHHHHHcCCC------cceEEEEECHHHHHHHH
Confidence 468999999999985420 0 124566775 8888888877432 5 579999999999999
Q ss_pred HHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCC-Ccc-hH-hHHHHh-cCCCCCchhHHHHHHH
Q 012210 261 MLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVP-VVP-LG-ALLTAA-YPLSSSPPYVFSWLNN 336 (468)
Q Consensus 261 ~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~-~~~~~~-~~~~~~~~~~~~~l~~ 336 (468)
+|.+| |++|+++|++++................ ........ ... .+ ...... +....... .+...
T Consensus 155 ~A~~~-----P~~V~~LvLi~s~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 223 (343)
T PRK08775 155 FASRH-----PARVRTLVVVSGAHRAHPYAAAWRALQR---RAVALGQLQCAEKHGLALARQLAMLSYRTPE---EFEER 223 (343)
T ss_pred HHHHC-----hHhhheEEEECccccCCHHHHHHHHHHH---HHHHcCCCCCCchhHHHHHHHHHHHHcCCHH---HHHHH
Confidence 99998 9999999999886442211000000000 00000000 000 00 000000 00000000 00000
Q ss_pred hhhccc----cCC---HHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecCCCCcCC
Q 012210 337 LISAED----MMH---PELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICP 409 (468)
Q Consensus 337 ~~~~~~----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~D~ivp 409 (468)
+..... ... ...+...............+..+...... ....+.+|++|+|+|+|++|.++|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~l~~I~~PtLvi~G~~D~~~p 292 (343)
T PRK08775 224 FDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESIDL-----------HRVDPEAIRVPTVVVAVEGDRLVP 292 (343)
T ss_pred hCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHHhh-----------cCCChhcCCCCeEEEEeCCCEeeC
Confidence 000000 000 00000000000011111111111111100 012468899999999999999999
Q ss_pred HHHHHHHHHhC-CCCceeEEEecCCC-CCCCCcccccccccchhhHHHHHHHHHhhccC
Q 012210 410 PEAVEETVKLL-PEDLVTYKVFGEPS-GPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 466 (468)
Q Consensus 410 ~~~~~~l~~~i-p~~~~~~~v~~~~~-agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~ 466 (468)
++.+.++.+.+ +++ +++++ ++ +||..++| +|++|.+.|.+||++...
T Consensus 293 ~~~~~~~~~~i~p~a--~l~~i--~~~aGH~~~lE------~Pe~~~~~l~~FL~~~~~ 341 (343)
T PRK08775 293 LADLVELAEGLGPRG--SLRVL--RSPYGHDAFLK------ETDRIDAILTTALRSTGE 341 (343)
T ss_pred HHHHHHHHHHcCCCC--eEEEE--eCCccHHHHhc------CHHHHHHHHHHHHHhccc
Confidence 99999999988 566 77877 74 89999998 999999999999987643
|
|
| >TIGR01607 PST-A Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Probab=99.70 E-value=8.5e-16 Score=154.18 Aligned_cols=236 Identities=19% Similarity=0.189 Sum_probs=139.7
Q ss_pred hHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhh-------------
Q 012210 172 DLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQ------------- 238 (468)
Q Consensus 172 ~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~------------- 238 (468)
.+++.|. .+||.|+++|+.||+..-.... ..++ -.++++++ +|+..+++.++..
T Consensus 65 ~~~~~l~---~~G~~V~~~D~rGHG~S~~~~~----~~g~-----~~~~~~~v-~Dl~~~i~~~~~~~~~~~~~~~~~~~ 131 (332)
T TIGR01607 65 SWIENFN---KNGYSVYGLDLQGHGESDGLQN----LRGH-----INCFDDLV-YDVIQYMNRINDSIILENETKSDDES 131 (332)
T ss_pred HHHHHHH---HCCCcEEEecccccCCCccccc----cccc-----hhhHHHHH-HHHHHHHHHhhhhhcccccccccccc
Confidence 4577777 8999999999999976311100 0111 02678887 9999999988652
Q ss_pred ------cCCCCCcEEEEEEehhHHHHHHHHHhcCCCC---CcccccceeEEccccccCCchh----hHHhhcccCchhhh
Q 012210 239 ------SKPKDGKLLAIGHSMGGILLYAMLSRCGFEG---RESRLAAIVTLASSLDYTSSKS----TLKLLLPLADPAQA 305 (468)
Q Consensus 239 ------~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~---~p~~V~~lVllap~~~~~~~~~----~~~~~~~~~~~~~~ 305 (468)
.+. ..+++++||||||.+++.++..++... +...++++|+++|++....... .+...
T Consensus 132 ~~~~~~~~~-~~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~--------- 201 (332)
T TIGR01607 132 YDIVNTKEN-RLPMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYF--------- 201 (332)
T ss_pred ccccccccC-CCceeEeeccCccHHHHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhh---------
Confidence 110 238999999999999999987652110 0126899998888764321100 00000
Q ss_pred cCCCCcchHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccC---CCcHHHHHHHHHHHhcCcccccCC
Q 012210 306 LNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFC---TIPAKLILQLTTAFREGGLRDRGG 382 (468)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 382 (468)
..++...+..+.|....... .+ ...++...+.+..+... ..+......+......
T Consensus 202 ----~~~l~~~~~~~~p~~~~~~~--~~--------~~~~~~~~~~~~~Dp~~~~~~~s~~~~~~l~~~~~~-------- 259 (332)
T TIGR01607 202 ----YLPVMNFMSRVFPTFRISKK--IR--------YEKSPYVNDIIKFDKFRYDGGITFNLASELIKATDT-------- 259 (332)
T ss_pred ----HHHHHHHHHHHCCcccccCc--cc--------cccChhhhhHHhcCccccCCcccHHHHHHHHHHHHH--------
Confidence 00011111222221110000 00 00122222222222221 1223333333332211
Q ss_pred ccccccccCcc--CccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHH
Q 012210 383 KFFYKDHIHKC--NIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQF 460 (468)
Q Consensus 383 ~~~~~~~l~~I--~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~F 460 (468)
....+.++ ++|+|+|+|++|.+++++.++.+++.+...+++++++ ++++|..+.| ..++++.+.|.+|
T Consensus 260 ---~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~--~g~~H~i~~E-----~~~~~v~~~i~~w 329 (332)
T TIGR01607 260 ---LDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTL--EDMDHVITIE-----PGNEEVLKKIIEW 329 (332)
T ss_pred ---HHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEE--CCCCCCCccC-----CCHHHHHHHHHHH
Confidence 11234455 7999999999999999999999998876555688888 8999999987 2578999999999
Q ss_pred Hh
Q 012210 461 LG 462 (468)
Q Consensus 461 L~ 462 (468)
|+
T Consensus 330 L~ 331 (332)
T TIGR01607 330 IS 331 (332)
T ss_pred hh
Confidence 86
|
These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. |
| >PRK03204 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=6.2e-16 Score=151.98 Aligned_cols=231 Identities=14% Similarity=0.181 Sum_probs=124.0
Q ss_pred hhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEE
Q 012210 170 IRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAI 249 (468)
Q Consensus 170 i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lv 249 (468)
++.+...| ..+|+|+++|+.|++..-.. ...+++++++. +++.++++++ +.. +++++
T Consensus 50 ~~~~~~~l----~~~~~vi~~D~~G~G~S~~~------------~~~~~~~~~~~-~~~~~~~~~~----~~~--~~~lv 106 (286)
T PRK03204 50 YRDIIVAL----RDRFRCVAPDYLGFGLSERP------------SGFGYQIDEHA-RVIGEFVDHL----GLD--RYLSM 106 (286)
T ss_pred HHHHHHHH----hCCcEEEEECCCCCCCCCCC------------CccccCHHHHH-HHHHHHHHHh----CCC--CEEEE
Confidence 34444444 46799999999999752110 01234555664 6666666655 333 89999
Q ss_pred EEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCchh
Q 012210 250 GHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPY 329 (468)
Q Consensus 250 GhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (468)
||||||.+++.++..+ |++|+++|++++....... .....+.... ...+. ...++. ...+
T Consensus 107 G~S~Gg~va~~~a~~~-----p~~v~~lvl~~~~~~~~~~-~~~~~~~~~~-----~~~~~--~~~~~~-------~~~~ 166 (286)
T PRK03204 107 GQDWGGPISMAVAVER-----ADRVRGVVLGNTWFWPADT-LAMKAFSRVM-----SSPPV--QYAILR-------RNFF 166 (286)
T ss_pred EECccHHHHHHHHHhC-----hhheeEEEEECccccCCCc-hhHHHHHHHh-----ccccc--hhhhhh-------hhHH
Confidence 9999999999999987 8999999998765321110 0000000000 00000 000000 0000
Q ss_pred HHHHHHHhhhccccCCHHHHHHHHhhccCCCcHH--HHHHHHHHHhcCcccccCCccccccccCc--cCccEEEEecCCC
Q 012210 330 VFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAK--LILQLTTAFREGGLRDRGGKFFYKDHIHK--CNIPILAIAGDQD 405 (468)
Q Consensus 330 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--I~vPvLiI~G~~D 405 (468)
...++.... ....+.+.+..+. .. ...+.. ....+...+.. ... ........+.+ +++|+|+|+|++|
T Consensus 167 ~~~~~~~~~--~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~PtliI~G~~D 238 (286)
T PRK03204 167 VERLIPAGT--EHRPSSAVMAHYR-AV-QPNAAARRGVAEMPKQILA--ARP--LLARLAREVPATLGTKPTLLVWGMKD 238 (286)
T ss_pred HHHhccccc--cCCCCHHHHHHhc-CC-CCCHHHHHHHHHHHHhcch--hhH--HHHHhhhhhhhhcCCCCeEEEecCCC
Confidence 001110000 0011222222211 11 111110 00000000000 000 00001111121 3899999999999
Q ss_pred CcCCHH-HHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHH
Q 012210 406 LICPPE-AVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFL 461 (468)
Q Consensus 406 ~ivp~~-~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL 461 (468)
.++++. ..+.+.+.+|+. +++++ +++||+.|.| +|+++.+.|.+||
T Consensus 239 ~~~~~~~~~~~~~~~ip~~--~~~~i--~~aGH~~~~e------~Pe~~~~~i~~~~ 285 (286)
T PRK03204 239 VAFRPKTILPRLRATFPDH--VLVEL--PNAKHFIQED------APDRIAAAIIERF 285 (286)
T ss_pred cccCcHHHHHHHHHhcCCC--eEEEc--CCCccccccc------CHHHHHHHHHHhc
Confidence 988655 578899999987 88888 9999999998 9999999999997
|
|
| >TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.5e-15 Score=145.25 Aligned_cols=254 Identities=18% Similarity=0.243 Sum_probs=132.4
Q ss_pred ccccccccccccc-hhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHH
Q 012210 157 LLERRQSSAIAIQ-IRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYI 235 (468)
Q Consensus 157 ll~~~~~~G~~~~-i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l 235 (468)
++-.+++.|-+.. ...+...+. .+||.|+++|++|++..-... .....++.++++ +|+.++++.+
T Consensus 28 vl~~hG~~g~~~~~~~~~~~~l~---~~g~~vi~~d~~G~G~s~~~~----------~~~~~~~~~~~~-~~~~~~~~~~ 93 (288)
T TIGR01250 28 LLLLHGGPGMSHEYLENLRELLK---EEGREVIMYDQLGCGYSDQPD----------DSDELWTIDYFV-DELEEVREKL 93 (288)
T ss_pred EEEEcCCCCccHHHHHHHHHHHH---hcCCEEEEEcCCCCCCCCCCC----------cccccccHHHHH-HHHHHHHHHc
Confidence 3443444343333 333444444 459999999999986531100 000014566775 7777776665
Q ss_pred HhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHh
Q 012210 236 RAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGA 315 (468)
Q Consensus 236 ~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (468)
.. . +++++||||||.+++.+|..+ |++++++|++++................. .+.. ...
T Consensus 94 ~~----~--~~~liG~S~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~~~--------~~~~-~~~ 153 (288)
T TIGR01250 94 GL----D--KFYLLGHSWGGMLAQEYALKY-----GQHLKGLIISSMLDSAPEYVKELNRLRKE--------LPPE-VRA 153 (288)
T ss_pred CC----C--cEEEEEeehHHHHHHHHHHhC-----ccccceeeEecccccchHHHHHHHHHHhh--------cChh-HHH
Confidence 33 2 799999999999999999987 88999999987644221110000000000 0000 000
Q ss_pred HHHHhcCCCC-CchhHHHHHHHhhh---ccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCccc--ccCCccccccc
Q 012210 316 LLTAAYPLSS-SPPYVFSWLNNLIS---AEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLR--DRGGKFFYKDH 389 (468)
Q Consensus 316 ~~~~~~~~~~-~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 389 (468)
.+........ ........+..+.. ......+........ ......+. .......+. ......+....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 226 (288)
T TIGR01250 154 AIKRCEASGDYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKS----GMNTNVYN---IMQGPNEFTITGNLKDWDITDK 226 (288)
T ss_pred HHHHHHhccCcchHHHHHHHHHHHHHhhcccccchHHHHHHhh----ccCHHHHh---cccCCccccccccccccCHHHH
Confidence 0000000000 00000000000000 000001111111000 00000000 000000000 00011223456
Q ss_pred cCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 012210 390 IHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 462 (468)
Q Consensus 390 l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~ 462 (468)
+.+|+||+|+++|++|.+ +++..+.+.+.+++. +++++ ++++|+.+.+ .|+++.+.|.+||+
T Consensus 227 l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~~~~--~~~~~--~~~gH~~~~e------~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 227 LSEIKVPTLLTVGEFDTM-TPEAAREMQELIAGS--RLVVF--PDGSHMTMIE------DPEVYFKLLSDFIR 288 (288)
T ss_pred hhccCCCEEEEecCCCcc-CHHHHHHHHHhccCC--eEEEe--CCCCCCcccC------CHHHHHHHHHHHhC
Confidence 788999999999999985 668888899999876 77777 8999999998 89999999999984
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase |
| >PLN03084 alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.3e-15 Score=152.00 Aligned_cols=245 Identities=11% Similarity=0.097 Sum_probs=136.1
Q ss_pred cccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCC
Q 012210 164 SAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKD 243 (468)
Q Consensus 164 ~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~ 243 (468)
||.......+.. ++..+.++|+|+++|+.|++..-... .....++++++++ +|+.++++.+...
T Consensus 134 HG~~~~~~~w~~-~~~~L~~~~~Via~DlpG~G~S~~p~---------~~~~~~ys~~~~a-~~l~~~i~~l~~~----- 197 (383)
T PLN03084 134 HGFPSQAYSYRK-VLPVLSKNYHAIAFDWLGFGFSDKPQ---------PGYGFNYTLDEYV-SSLESLIDELKSD----- 197 (383)
T ss_pred CCCCCCHHHHHH-HHHHHhcCCEEEEECCCCCCCCCCCc---------ccccccCCHHHHH-HHHHHHHHHhCCC-----
Confidence 455444433322 22233468999999999997631110 0011356788887 9999999887543
Q ss_pred CcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCc--hhhHHhhcccCchhhhcCCCCcchHhHHHHhc
Q 012210 244 GKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSS--KSTLKLLLPLADPAQALNVPVVPLGALLTAAY 321 (468)
Q Consensus 244 ~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (468)
+++++|||+||++++.+|.++ |++|+++|+++++...... +..+..+. ..++..++
T Consensus 198 -~~~LvG~s~GG~ia~~~a~~~-----P~~v~~lILi~~~~~~~~~~~p~~l~~~~----------------~~l~~~~~ 255 (383)
T PLN03084 198 -KVSLVVQGYFSPPVVKYASAH-----PDKIKKLILLNPPLTKEHAKLPSTLSEFS----------------NFLLGEIF 255 (383)
T ss_pred -CceEEEECHHHHHHHHHHHhC-----hHhhcEEEEECCCCccccccchHHHHHHH----------------HHHhhhhh
Confidence 899999999999999999998 8999999999987542210 00010000 00000000
Q ss_pred CCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCc-HHHHHHHHHHHhcCcccccCCccccccc--cCccCccEE
Q 012210 322 PLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIP-AKLILQLTTAFREGGLRDRGGKFFYKDH--IHKCNIPIL 398 (468)
Q Consensus 322 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~I~vPvL 398 (468)
..... .....++.. ........+....+......... ...+..+.+.+.. .+... ....... ..+|++|+|
T Consensus 256 ~~~~~-~~~~~~~~~--~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~-~l~~~--~~~l~~~l~~~~i~vPvL 329 (383)
T PLN03084 256 SQDPL-RASDKALTS--CGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKK-ELKKY--IEEMRSILTDKNWKTPIT 329 (383)
T ss_pred hcchH-HHHhhhhcc--cCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhc-ccchh--hHHHHhhhccccCCCCEE
Confidence 00000 000000000 00001112221111111111110 0111111111111 00000 0001111 146899999
Q ss_pred EEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 399 AIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 399 iI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
+|+|++|.+++.+.++.+.+. ++. +++++ ++++|+.|.| .|+++.+.|.+||.+
T Consensus 330 iI~G~~D~~v~~~~~~~~a~~-~~a--~l~vI--p~aGH~~~~E------~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 330 VCWGLRDRWLNYDGVEDFCKS-SQH--KLIEL--PMAGHHVQED------CGEELGGIISGILSK 383 (383)
T ss_pred EEeeCCCCCcCHHHHHHHHHh-cCC--eEEEE--CCCCCCcchh------CHHHHHHHHHHHhhC
Confidence 999999999999988888887 454 77777 9999999998 999999999999863
|
|
| >TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.66 E-value=7.7e-16 Score=155.77 Aligned_cols=69 Identities=23% Similarity=0.313 Sum_probs=59.3
Q ss_pred cccccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeE---EEecCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 012210 386 YKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTY---KVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 462 (468)
Q Consensus 386 ~~~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~---~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~ 462 (468)
+...+.+|++|+|+|+|++|.++|++.++++.+.++++...+ .++ +++||..|++ +|++|.+.|.+||+
T Consensus 280 ~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~--~~~GH~~~le------~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 280 LTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIE--SPYGHDAFLV------ETDQVEELIRGFLR 351 (351)
T ss_pred HHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeC--CCCCcchhhc------CHHHHHHHHHHHhC
Confidence 356788999999999999999999999999999999873222 133 6899999998 99999999999985
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. |
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.7e-15 Score=151.39 Aligned_cols=237 Identities=18% Similarity=0.205 Sum_probs=132.7
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|.+.|-...+..+...|. .+|+|+++|+.|++..... ....++.+++ +++.++++.+
T Consensus 134 vl~~HG~~~~~~~~~~~~~~l~----~~~~v~~~d~~g~G~s~~~-------------~~~~~~~~~~-~~~~~~~~~~- 194 (371)
T PRK14875 134 VVLIHGFGGDLNNWLFNHAALA----AGRPVIALDLPGHGASSKA-------------VGAGSLDELA-AAVLAFLDAL- 194 (371)
T ss_pred EEEECCCCCccchHHHHHHHHh----cCCEEEEEcCCCCCCCCCC-------------CCCCCHHHHH-HHHHHHHHhc-
Confidence 4443444444455555555554 5699999999998652110 0122455554 6666555543
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhh-HHhhcccCchhhhcCCCCcchHh
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKST-LKLLLPLADPAQALNVPVVPLGA 315 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 315 (468)
+.. +++++||||||.+++.+|..+ +.++.++|+++++......... ...+.
T Consensus 195 ---~~~--~~~lvG~S~Gg~~a~~~a~~~-----~~~v~~lv~~~~~~~~~~~~~~~~~~~~------------------ 246 (371)
T PRK14875 195 ---GIE--RAHLVGHSMGGAVALRLAARA-----PQRVASLTLIAPAGLGPEINGDYIDGFV------------------ 246 (371)
T ss_pred ---CCc--cEEEEeechHHHHHHHHHHhC-----chheeEEEEECcCCcCcccchhHHHHhh------------------
Confidence 333 899999999999999999886 8899999999875432211100 00000
Q ss_pred HHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCc
Q 012210 316 LLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNI 395 (468)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~v 395 (468)
.. .....+..++...+..........................+..+...... ......++...+.+++|
T Consensus 247 ------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~i~~ 315 (371)
T PRK14875 247 ------AA-ESRRELKPVLELLFADPALVTRQMVEDLLKYKRLDGVDDALRALADALFA----GGRQRVDLRDRLASLAI 315 (371)
T ss_pred ------cc-cchhHHHHHHHHHhcChhhCCHHHHHHHHHHhccccHHHHHHHHHHHhcc----CcccchhHHHHHhcCCC
Confidence 00 00000112222222111111222222211111101111111111111111 11112234456778999
Q ss_pred cEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 396 PILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 396 PvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
|+|+++|++|.++|++..+.+ .. ..+++++ +++||+.+++ .|+++.+.|.+||+++
T Consensus 316 Pvlii~g~~D~~vp~~~~~~l----~~-~~~~~~~--~~~gH~~~~e------~p~~~~~~i~~fl~~~ 371 (371)
T PRK14875 316 PVLVIWGEQDRIIPAAHAQGL----PD-GVAVHVL--PGAGHMPQME------AAADVNRLLAEFLGKA 371 (371)
T ss_pred CEEEEEECCCCccCHHHHhhc----cC-CCeEEEe--CCCCCChhhh------CHHHHHHHHHHHhccC
Confidence 999999999999998866543 22 2477777 8999999998 8999999999999763
|
|
| >KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.8e-15 Score=142.79 Aligned_cols=263 Identities=17% Similarity=0.214 Sum_probs=144.5
Q ss_pred ccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCC
Q 012210 163 SSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPK 242 (468)
Q Consensus 163 ~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~ 242 (468)
-||......-+.+.+-.+. ..+.|++.|++|.|..- .+. ++.+...- ...+..-|+..+...+..
T Consensus 96 iHGyGAg~g~f~~Nf~~La-~~~~vyaiDllG~G~SS---RP~----------F~~d~~~~-e~~fvesiE~WR~~~~L~ 160 (365)
T KOG4409|consen 96 IHGYGAGLGLFFRNFDDLA-KIRNVYAIDLLGFGRSS---RPK----------FSIDPTTA-EKEFVESIEQWRKKMGLE 160 (365)
T ss_pred EeccchhHHHHHHhhhhhh-hcCceEEecccCCCCCC---CCC----------CCCCcccc-hHHHHHHHHHHHHHcCCc
Confidence 4566666655555443322 48999999999987631 111 11111121 245667777777776665
Q ss_pred CCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcC---CCCcchHhHHHH
Q 012210 243 DGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALN---VPVVPLGALLTA 319 (468)
Q Consensus 243 ~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 319 (468)
|..|+||||||.++..||.+| |++|+++||++|...............+......... ....|+. .++.
T Consensus 161 --KmilvGHSfGGYLaa~YAlKy-----PerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl~-~LR~ 232 (365)
T KOG4409|consen 161 --KMILVGHSFGGYLAAKYALKY-----PERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFNPLA-LLRL 232 (365)
T ss_pred --ceeEeeccchHHHHHHHHHhC-----hHhhceEEEecccccccCCCcchhhcCCChHHHhhhhhhhhcCCHHH-HHHh
Confidence 999999999999999999999 9999999999885443321011100000000000000 0000000 0111
Q ss_pred hcCCCCCchhHHHHHHHhhhc-cccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccC--cc
Q 012210 320 AYPLSSSPPYVFSWLNNLISA-EDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCN--IP 396 (468)
Q Consensus 320 ~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~--vP 396 (468)
.-|+. +..+..+....+.. +.....+.+.+++.......|.... .+...+..+.+.. ......++.++ ||
T Consensus 233 ~Gp~G--p~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~-~fk~l~~~~g~Ar----~Pm~~r~~~l~~~~p 305 (365)
T KOG4409|consen 233 MGPLG--PKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGET-AFKNLFEPGGWAR----RPMIQRLRELKKDVP 305 (365)
T ss_pred ccccc--hHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHH-HHHHHHhccchhh----hhHHHHHHhhccCCC
Confidence 00111 11122222222221 1122333444444433332222211 1111122222211 11123444454 99
Q ss_pred EEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 397 ILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 397 vLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
+++|+|++|.+ +.....++.+.++...++++++ |++||....| +|+.|++.|..++++.
T Consensus 306 v~fiyG~~dWm-D~~~g~~~~~~~~~~~~~~~~v--~~aGHhvylD------np~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 306 VTFIYGDRDWM-DKNAGLEVTKSLMKEYVEIIIV--PGAGHHVYLD------NPEFFNQIVLEECDKV 364 (365)
T ss_pred EEEEecCcccc-cchhHHHHHHHhhcccceEEEe--cCCCceeecC------CHHHHHHHHHHHHhcc
Confidence 99999999966 4667777777666556688888 9999999998 9999999999999864
|
|
| >TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.5e-14 Score=146.36 Aligned_cols=261 Identities=15% Similarity=0.216 Sum_probs=162.6
Q ss_pred hhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEE
Q 012210 171 RDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIG 250 (468)
Q Consensus 171 ~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvG 250 (468)
+++.+.|. . |+.|+..|--..+. .......+++++|+ +-+..+++++ +. +++++|
T Consensus 120 RS~V~~Ll---~-g~dVYl~DW~~p~~-------------vp~~~~~f~ldDYi-~~l~~~i~~~----G~---~v~l~G 174 (406)
T TIGR01849 120 RSTVEALL---P-DHDVYITDWVNARM-------------VPLSAGKFDLEDYI-DYLIEFIRFL----GP---DIHVIA 174 (406)
T ss_pred HHHHHHHh---C-CCcEEEEeCCCCCC-------------CchhcCCCCHHHHH-HHHHHHHHHh----CC---CCcEEE
Confidence 55555555 5 99998855433321 00112456788997 7888888777 22 599999
Q ss_pred EehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhh--------------cCCCCcchHhH
Q 012210 251 HSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQA--------------LNVPVVPLGAL 316 (468)
Q Consensus 251 hS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~ 316 (468)
+|+||.+++.+++.+...+.|.++++++++++|+++...+..+..+......... .+...+|...+
T Consensus 175 vCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~ 254 (406)
T TIGR01849 175 VCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQ 254 (406)
T ss_pred EchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHH
Confidence 9999999999998875555566899999999999998765555544321111110 01112222222
Q ss_pred HHHhcCCCCCch--hHHHHHHHhhhccccCCHHHHHHHHh--hccCCCcHHHHHHHHHH-HhcCcccccCCcccc---cc
Q 012210 317 LTAAYPLSSSPP--YVFSWLNNLISAEDMMHPELLKKLVL--NNFCTIPAKLILQLTTA-FREGGLRDRGGKFFY---KD 388 (468)
Q Consensus 317 ~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~ 388 (468)
...+..+..... ....++..+... +....+....+.. ......|...+.++.+. +..+.+.. |.+.+ .-
T Consensus 255 ~~~F~~mnp~r~~~~~~~~~~~l~~g-d~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~~--G~l~v~G~~V 331 (406)
T TIGR01849 255 LAGFISMNLDRHTKAHSDFFLHLVKG-DGQEADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLPQ--GKFIVEGKRV 331 (406)
T ss_pred HHHHHHcCcchHHHHHHHHHHHHhcC-CcchHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCccC--CcEEECCEEe
Confidence 222222222111 122222222211 1112222222222 23467888888888854 55554443 33322 34
Q ss_pred ccCccC-ccEEEEecCCCCcCCHHHHHHHHHhC---CCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 389 HIHKCN-IPILAIAGDQDLICPPEAVEETVKLL---PEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 389 ~l~~I~-vPvLiI~G~~D~ivp~~~~~~l~~~i---p~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
++++|+ ||+|.+.|++|.|+|+.+++.+.+.+ +..+++.++. +++| |++++.|+..++++++.|.+||.++
T Consensus 332 dl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~--~~~G---H~Gvf~G~r~~~~i~P~i~~wl~~~ 406 (406)
T TIGR01849 332 DPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQ--PGVG---HYGVFSGSRFREEIYPLVREFIRRN 406 (406)
T ss_pred cHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeec--CCCC---eEEEeeChhhhhhhchHHHHHHHhC
Confidence 789999 99999999999999999999999884 7666666665 4445 5666789999999999999999864
|
This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some |
| >PRK13604 luxD acyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=5.6e-15 Score=143.90 Aligned_cols=209 Identities=12% Similarity=0.132 Sum_probs=122.5
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCcccc-ccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDL-QERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYI 235 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~-~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l 235 (468)
++-.+++.+-..++..+|+.|+ .+||.|+.+|++++ +.. . |.. .++++... .+|+.++++|+
T Consensus 40 vIi~HGf~~~~~~~~~~A~~La---~~G~~vLrfD~rg~~GeS-~---------G~~---~~~t~s~g-~~Dl~aaid~l 102 (307)
T PRK13604 40 ILIASGFARRMDHFAGLAEYLS---SNGFHVIRYDSLHHVGLS-S---------GTI---DEFTMSIG-KNSLLTVVDWL 102 (307)
T ss_pred EEEeCCCCCChHHHHHHHHHHH---HCCCEEEEecCCCCCCCC-C---------Ccc---ccCccccc-HHHHHHHHHHH
Confidence 3443444443345788889998 99999999999887 432 1 110 01122222 49999999999
Q ss_pred HhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHh
Q 012210 236 RAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGA 315 (468)
Q Consensus 236 ~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (468)
+.+ .. .+++++||||||.+++..|.. .+++++|+.+|..+.... +....... . .
T Consensus 103 k~~-~~--~~I~LiG~SmGgava~~~A~~-------~~v~~lI~~sp~~~l~d~---l~~~~~~~-------~-----~- 156 (307)
T PRK13604 103 NTR-GI--NNLGLIAASLSARIAYEVINE-------IDLSFLITAVGVVNLRDT---LERALGYD-------Y-----L- 156 (307)
T ss_pred Hhc-CC--CceEEEEECHHHHHHHHHhcC-------CCCCEEEEcCCcccHHHH---HHHhhhcc-------c-----c-
Confidence 886 33 389999999999998776653 348888888886653311 00000000 0 0
Q ss_pred HHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCc
Q 012210 316 LLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNI 395 (468)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~v 395 (468)
.++.... +..++ +....... ..+......-.+. ......+.+.++++
T Consensus 157 ----~~p~~~l-------------------p~~~d------~~g~~l~~-~~f~~~~~~~~~~---~~~s~i~~~~~l~~ 203 (307)
T PRK13604 157 ----SLPIDEL-------------------PEDLD------FEGHNLGS-EVFVTDCFKHGWD---TLDSTINKMKGLDI 203 (307)
T ss_pred ----cCccccc-------------------ccccc------cccccccH-HHHHHHHHhcCcc---ccccHHHHHhhcCC
Confidence 0000000 00000 00000000 0111111000000 00111244677889
Q ss_pred cEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccc
Q 012210 396 PILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDL 443 (468)
Q Consensus 396 PvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~ 443 (468)
|+|+|||++|.+||++.++++++.++..+++++++ |++.|..+..+
T Consensus 204 PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i--~Ga~H~l~~~~ 249 (307)
T PRK13604 204 PFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSL--IGSSHDLGENL 249 (307)
T ss_pred CEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEe--CCCccccCcch
Confidence 99999999999999999999999998666788888 99999888653
|
|
| >PLN02511 hydrolase | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.5e-15 Score=152.79 Aligned_cols=245 Identities=18% Similarity=0.195 Sum_probs=136.4
Q ss_pred ccccccccccc--cchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHH
Q 012210 157 LLERRQSSAIA--IQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEY 234 (468)
Q Consensus 157 ll~~~~~~G~~--~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~ 234 (468)
++-.|+..|-. .+++.++..+. .+||+|+++|+.|+++.-... . .+....+. +|+.+++++
T Consensus 103 vvllHG~~g~s~~~y~~~~~~~~~---~~g~~vv~~d~rG~G~s~~~~------~-------~~~~~~~~-~Dl~~~i~~ 165 (388)
T PLN02511 103 LILLPGLTGGSDDSYVRHMLLRAR---SKGWRVVVFNSRGCADSPVTT------P-------QFYSASFT-GDLRQVVDH 165 (388)
T ss_pred EEEECCCCCCCCCHHHHHHHHHHH---HCCCEEEEEecCCCCCCCCCC------c-------CEEcCCch-HHHHHHHHH
Confidence 44434443332 24566666665 899999999999997631100 0 00112444 899999999
Q ss_pred HHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCccc--ccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcc
Q 012210 235 IRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESR--LAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVP 312 (468)
Q Consensus 235 l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~--V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (468)
++.+.+.. +++++||||||.+++.|+.++ +++ |.++++++++.+.......+... .....
T Consensus 166 l~~~~~~~--~~~lvG~SlGg~i~~~yl~~~-----~~~~~v~~~v~is~p~~l~~~~~~~~~~-----------~~~~y 227 (388)
T PLN02511 166 VAGRYPSA--NLYAAGWSLGANILVNYLGEE-----GENCPLSGAVSLCNPFDLVIADEDFHKG-----------FNNVY 227 (388)
T ss_pred HHHHCCCC--CEEEEEechhHHHHHHHHHhc-----CCCCCceEEEEECCCcCHHHHHHHHhcc-----------HHHHH
Confidence 99876544 899999999999999999987 444 89999988776532111000000 00000
Q ss_pred hHhHHHHhcCCCCCchhHHHHHHHhhhc-cccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCC------ccc
Q 012210 313 LGALLTAAYPLSSSPPYVFSWLNNLISA-EDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGG------KFF 385 (468)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 385 (468)
...+...+. ...... ...+.. ....+...+.. ...+..+...+... ..++.. ..+
T Consensus 228 ~~~~~~~l~------~~~~~~-~~~~~~~~~~~~~~~~~~----------~~~~~~fd~~~t~~-~~gf~~~~~yy~~~s 289 (388)
T PLN02511 228 DKALAKALR------KIFAKH-ALLFEGLGGEYNIPLVAN----------AKTVRDFDDGLTRV-SFGFKSVDAYYSNSS 289 (388)
T ss_pred HHHHHHHHH------HHHHHH-HHHHhhCCCccCHHHHHh----------CCCHHHHHHhhhhh-cCCCCCHHHHHHHcC
Confidence 000000000 000000 000000 00000000000 00111111111110 001111 011
Q ss_pred cccccCccCccEEEEecCCCCcCCHHHH-HHHHHhCCCCceeEEEecCCCCCCCCcccccccccchh------hHHHHHH
Q 012210 386 YKDHIHKCNIPILAIAGDQDLICPPEAV-EETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVE------QVYPCIV 458 (468)
Q Consensus 386 ~~~~l~~I~vPvLiI~G~~D~ivp~~~~-~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe------~v~~~I~ 458 (468)
....+.+|++|+|+|+|++|+++|++.. ....+.+++. +++++ +++||.+++| .|+ ++.+.|.
T Consensus 290 ~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~~--~l~~~--~~gGH~~~~E------~p~~~~~~~w~~~~i~ 359 (388)
T PLN02511 290 SSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKANPNC--LLIVT--PSGGHLGWVA------GPEAPFGAPWTDPVVM 359 (388)
T ss_pred chhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCCCE--EEEEC--CCcceecccc------CCCCCCCCccHHHHHH
Confidence 2357889999999999999999998765 4566777876 88887 8999999987 444 3689999
Q ss_pred HHHhhc
Q 012210 459 QFLGRY 464 (468)
Q Consensus 459 ~FL~~~ 464 (468)
+||+..
T Consensus 360 ~Fl~~~ 365 (388)
T PLN02511 360 EFLEAL 365 (388)
T ss_pred HHHHHH
Confidence 999765
|
|
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=99.64 E-value=6.6e-15 Score=167.72 Aligned_cols=255 Identities=16% Similarity=0.255 Sum_probs=145.6
Q ss_pred HHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEeh
Q 012210 174 SQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSM 253 (468)
Q Consensus 174 a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~ 253 (468)
...|+ .+||+|+++| +|... . . .+. .++++.+++ .++.++++.++...+ ++++++||||
T Consensus 92 v~~L~---~~g~~v~~~d-~G~~~----~-~----~~~----~~~~l~~~i-~~l~~~l~~v~~~~~---~~v~lvG~s~ 150 (994)
T PRK07868 92 VGILH---RAGLDPWVID-FGSPD----K-V----EGG----MERNLADHV-VALSEAIDTVKDVTG---RDVHLVGYSQ 150 (994)
T ss_pred HHHHH---HCCCEEEEEc-CCCCC----h-h----HcC----ccCCHHHHH-HHHHHHHHHHHHhhC---CceEEEEECh
Confidence 56676 8999999999 33211 1 1 011 245777886 678888888776643 3899999999
Q ss_pred hHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhh-HH-hh-ccc--Cch---hhhcCCCCcchHhHHHHhcCCCC
Q 012210 254 GGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKST-LK-LL-LPL--ADP---AQALNVPVVPLGALLTAAYPLSS 325 (468)
Q Consensus 254 GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~-~~-~~-~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~ 325 (468)
||++++.+++.++ +++|+++|+++++.++...... +. .+ ... ... ......|.+ +....+.+..
T Consensus 151 GG~~a~~~aa~~~----~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~----~~~~~~~~l~ 222 (994)
T PRK07868 151 GGMFCYQAAAYRR----SKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGW----MARTGFQMLD 222 (994)
T ss_pred hHHHHHHHHHhcC----CCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHH----HHHHHHHhcC
Confidence 9999999987541 4589999999999876543110 00 00 000 000 001111111 1111111111
Q ss_pred CchhHH---HHHHHhhhccccCCHHHHHHHHhhc-cCCCcHHHHHHHHHHHhc-CcccccCCcccc---ccccCccCccE
Q 012210 326 SPPYVF---SWLNNLISAEDMMHPELLKKLVLNN-FCTIPAKLILQLTTAFRE-GGLRDRGGKFFY---KDHIHKCNIPI 397 (468)
Q Consensus 326 ~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~l~~I~vPv 397 (468)
....+. .++..+.......+.+....+.... +...+.....++.+.+.. +.+. .+.+.. ...+.+|++|+
T Consensus 223 p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~--~g~~~~~~~~~~L~~i~~P~ 300 (994)
T PRK07868 223 PVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMM--TGGFAINGQMVTLADITCPV 300 (994)
T ss_pred hhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCccc--CceEEECCEEcchhhCCCCE
Confidence 100111 1111111111112223333333222 113333344444444321 1111 111222 23589999999
Q ss_pred EEEecCCCCcCCHHHHHHHHHhCCCCceeE-EEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccC
Q 012210 398 LAIAGDQDLICPPEAVEETVKLLPEDLVTY-KVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 466 (468)
Q Consensus 398 LiI~G~~D~ivp~~~~~~l~~~ip~~~~~~-~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~ 466 (468)
|+|+|++|.++|++.++.+.+.+++. ++ .++ +++||+++ +.|..+++++|+.|.+||.+++.
T Consensus 301 L~i~G~~D~ivp~~~~~~l~~~i~~a--~~~~~~--~~~GH~g~---~~g~~a~~~~wp~i~~wl~~~~~ 363 (994)
T PRK07868 301 LAFVGEVDDIGQPASVRGIRRAAPNA--EVYESL--IRAGHFGL---VVGSRAAQQTWPTVADWVKWLEG 363 (994)
T ss_pred EEEEeCCCCCCCHHHHHHHHHhCCCC--eEEEEe--CCCCCEee---eechhhhhhhChHHHHHHHHhcc
Confidence 99999999999999999999999987 44 344 55565555 57889999999999999998864
|
|
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=99.63 E-value=3.3e-14 Score=138.79 Aligned_cols=249 Identities=13% Similarity=0.148 Sum_probs=137.3
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|++.+-...+..++..|+ .+||+|+++|+.+++..... . ...+++++++ +++.++++.+.
T Consensus 21 vvliHG~~~~~~~w~~~~~~L~---~~g~~vi~~dl~g~G~s~~~--------~----~~~~~~~~~~-~~l~~~i~~l~ 84 (273)
T PLN02211 21 FVLIHGISGGSWCWYKIRCLME---NSGYKVTCIDLKSAGIDQSD--------A----DSVTTFDEYN-KPLIDFLSSLP 84 (273)
T ss_pred EEEECCCCCCcCcHHHHHHHHH---hCCCEEEEecccCCCCCCCC--------c----ccCCCHHHHH-HHHHHHHHhcC
Confidence 4444555555556677777777 78999999999998652100 0 0113566665 67666666542
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhH
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAL 316 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
. . +++++|||||||.+++.++.++ +++|+++|++++........ ............... ...
T Consensus 85 ~---~--~~v~lvGhS~GG~v~~~~a~~~-----p~~v~~lv~~~~~~~~~g~~-~~~~~~~~~~~~~~~-------~~~ 146 (273)
T PLN02211 85 E---N--EKVILVGHSAGGLSVTQAIHRF-----PKKICLAVYVAATMLKLGFQ-TDEDMKDGVPDLSEF-------GDV 146 (273)
T ss_pred C---C--CCEEEEEECchHHHHHHHHHhC-----hhheeEEEEeccccCCCCCC-HHHHHhccccchhhh-------ccc
Confidence 1 1 3899999999999999999887 88999999997643211100 000000000000000 000
Q ss_pred HHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCcc-Cc
Q 012210 317 LTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKC-NI 395 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I-~v 395 (468)
+.......... .........+....++.+ ..+......+............ ...+......++ ++
T Consensus 147 ~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v 212 (273)
T PLN02211 147 YELGFGLGPDQ----------PPTSAIIKKEFRRKILYQ---MSPQEDSTLAAMLLRPGPILAL-RSARFEEETGDIDKV 212 (273)
T ss_pred eeeeeccCCCC----------CCceeeeCHHHHHHHHhc---CCCHHHHHHHHHhcCCcCcccc-ccccccccccccCcc
Confidence 00000000000 000000011111111111 1222221111111111000000 011112234456 89
Q ss_pred cEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 396 PILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 396 PvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
|+++|+|++|.++|++..+.+.+.+++. +++.+ + +||..+++ +|+++...|.++....
T Consensus 213 P~l~I~g~~D~~ip~~~~~~m~~~~~~~--~~~~l--~-~gH~p~ls------~P~~~~~~i~~~a~~~ 270 (273)
T PLN02211 213 PRVYIKTLHDHVVKPEQQEAMIKRWPPS--QVYEL--E-SDHSPFFS------TPFLLFGLLIKAAASV 270 (273)
T ss_pred ceEEEEeCCCCCCCHHHHHHHHHhCCcc--EEEEE--C-CCCCcccc------CHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999976 77777 4 89999998 9999999999886543
|
|
| >PRK00175 metX homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=6e-15 Score=150.76 Aligned_cols=74 Identities=19% Similarity=0.193 Sum_probs=62.9
Q ss_pred cccccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCc--eeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 386 YKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDL--VTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 386 ~~~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~--~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
+...+.+|+||+|+|+|++|.++|++.++++.+.++++. .+++++ .+++||+.+++ +|+++.+.|.+||.+
T Consensus 301 ~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i-~~~~GH~~~le------~p~~~~~~L~~FL~~ 373 (379)
T PRK00175 301 LAAALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEI-DSPYGHDAFLL------DDPRYGRLVRAFLER 373 (379)
T ss_pred HHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEe-CCCCCchhHhc------CHHHHHHHHHHHHHh
Confidence 456788999999999999999999999999999999853 245544 13899999998 999999999999988
Q ss_pred ccC
Q 012210 464 YDS 466 (468)
Q Consensus 464 ~~~ 466 (468)
..+
T Consensus 374 ~~~ 376 (379)
T PRK00175 374 AAR 376 (379)
T ss_pred hhh
Confidence 653
|
|
| >PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.3e-14 Score=136.27 Aligned_cols=203 Identities=22% Similarity=0.203 Sum_probs=129.1
Q ss_pred hHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEE
Q 012210 172 DLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGH 251 (468)
Q Consensus 172 ~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGh 251 (468)
...+.|+ .+||.|+.|+..|..+ .-+.+...+. .+ +.....+|+.++++++..+..++.++++++||
T Consensus 5 ~~~~~la---~~Gy~v~~~~~rGs~g----~g~~~~~~~~----~~--~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~ 71 (213)
T PF00326_consen 5 WNAQLLA---SQGYAVLVPNYRGSGG----YGKDFHEAGR----GD--WGQADVDDVVAAIEYLIKQYYIDPDRIGIMGH 71 (213)
T ss_dssp HHHHHHH---TTT-EEEEEE-TTSSS----SHHHHHHTTT----TG--TTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEE
T ss_pred HHHHHHH---hCCEEEEEEcCCCCCc----cchhHHHhhh----cc--ccccchhhHHHHHHHHhccccccceeEEEEcc
Confidence 3455677 9999999999998765 2223322221 12 22222499999999999887666679999999
Q ss_pred ehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCchhHH
Q 012210 252 SMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVF 331 (468)
Q Consensus 252 S~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (468)
|+||.+++.++.++ |+.++++|..++..+......... . +. .
T Consensus 72 S~GG~~a~~~~~~~-----~~~f~a~v~~~g~~d~~~~~~~~~---------------~-----~~-------------~ 113 (213)
T PF00326_consen 72 SYGGYLALLAATQH-----PDRFKAAVAGAGVSDLFSYYGTTD---------------I-----YT-------------K 113 (213)
T ss_dssp THHHHHHHHHHHHT-----CCGSSEEEEESE-SSTTCSBHHTC---------------C-----HH-------------H
T ss_pred cccccccchhhccc-----ceeeeeeeccceecchhccccccc---------------c-----cc-------------c
Confidence 99999999999976 889999999988766443210000 0 00 0
Q ss_pred HHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCc--cCccEEEEecCCCCcCC
Q 012210 332 SWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHK--CNIPILAIAGDQDLICP 409 (468)
Q Consensus 332 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--I~vPvLiI~G~~D~ivp 409 (468)
.+.... .........+..+.. ...+.+ +++|+|++||++|.+||
T Consensus 114 ~~~~~~------------------~~~~~~~~~~~~~s~----------------~~~~~~~~~~~P~li~hG~~D~~Vp 159 (213)
T PF00326_consen 114 AEYLEY------------------GDPWDNPEFYRELSP----------------ISPADNVQIKPPVLIIHGENDPRVP 159 (213)
T ss_dssp GHHHHH------------------SSTTTSHHHHHHHHH----------------GGGGGGCGGGSEEEEEEETTBSSST
T ss_pred cccccc------------------Cccchhhhhhhhhcc----------------ccccccccCCCCEEEEccCCCCccC
Confidence 000000 000001111111111 123344 89999999999999999
Q ss_pred HHHHHHHHHhCCCC--ceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccC
Q 012210 410 PEAVEETVKLLPED--LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 466 (468)
Q Consensus 410 ~~~~~~l~~~ip~~--~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~ 466 (468)
+..+.++++.+... ..+++++ |+++|..-.. +......+.+.+||+++..
T Consensus 160 ~~~s~~~~~~L~~~g~~~~~~~~--p~~gH~~~~~-----~~~~~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 160 PSQSLRLYNALRKAGKPVELLIF--PGEGHGFGNP-----ENRRDWYERILDFFDKYLK 211 (213)
T ss_dssp THHHHHHHHHHHHTTSSEEEEEE--TT-SSSTTSH-----HHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcCCCEEEEEc--CcCCCCCCCc-----hhHHHHHHHHHHHHHHHcC
Confidence 99999998877643 3566666 8999944332 2556889999999998864
|
; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B .... |
| >COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.2e-14 Score=140.66 Aligned_cols=315 Identities=19% Similarity=0.248 Sum_probs=197.4
Q ss_pred hhhHhhhhcc---ccCchhhhhhHHhhh-----cccccccccccccc---ccchhhHHHHHHhhhhcCceEeccCccccc
Q 012210 128 AKLFDQISKL---LEDSQLSEGFNEIRG-----KLSSLLERRQSSAI---AIQIRDLSQNLVNMIEEGQLSVSPQLFDLQ 196 (468)
Q Consensus 128 ~~~~~~~~~~---~~~~~~~~~~~~~~~-----~~~~ll~~~~~~G~---~~~i~~~a~~la~~l~~Gy~viapdl~~~~ 196 (468)
..+.++++++ +.+|++..++.+-.| .+..|++.-+..|- +..--.+.+.+| ...|++|+--|++...
T Consensus 19 ~~~~~A~spsNf~~~np~~~re~~~s~g~~L~~G~~~l~ed~~~~~g~qtd~~~f~iG~nva--~tpg~vV~~ndv~~li 96 (445)
T COG3243 19 RQLTDAMSPSNFLITNPEALRETLESQGKNLVAGLENLAEDLERGGGSQTDESAFEIGQNVA--TTPGKVVFRNDVLELI 96 (445)
T ss_pred HHHHHhhCccchhccCHHHHHHHHHhcChhhhhhHHHHHHHHHhcCCCccCcccccccchhh--cCCceEEEeechhhhh
Confidence 5566777776 788999999877766 55556554433322 222222334444 2456777766665443
Q ss_pred cC-----------------------------CccchHHHhhcccceEeecC----------ChhhHHhhhHHHHHHHHHh
Q 012210 197 ER-----------------------------LFSTIDDFQKQLDLIVQYDW----------DFDHYLEEDVPAAMEYIRA 237 (468)
Q Consensus 197 ~~-----------------------------~~~~~~~l~~~~~~~~~~D~----------~~~~~~~~D~~a~i~~l~~ 237 (468)
.. -.+.+..+.++|..+...+| ++++|+.+++..+++.+++
T Consensus 97 qy~p~~e~v~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~aid~v~~ 176 (445)
T COG3243 97 QYKPLTEKVLKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAAKNLEDYILEGLSEAIDTVKD 176 (445)
T ss_pred ccCCCCCccCCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhhccHHHHHHHHHHHHHHHHHH
Confidence 31 12334466677777777777 6788988999999999999
Q ss_pred hcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCccc-ccceeEEccccccCCchhhHHhhccc---CchhhhcCCCCcch
Q 012210 238 QSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESR-LAAIVTLASSLDYTSSKSTLKLLLPL---ADPAQALNVPVVPL 313 (468)
Q Consensus 238 ~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~-V~~lVllap~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 313 (468)
..+.+ +|.++|||+||+++..+++.+ +.+ |++++++.++.++.... .+..+... .............-
T Consensus 177 itg~~--~InliGyCvGGtl~~~ala~~-----~~k~I~S~T~lts~~DF~~~g-~l~if~n~~~~~~~~~~i~~~g~lp 248 (445)
T COG3243 177 ITGQK--DINLIGYCVGGTLLAAALALM-----AAKRIKSLTLLTSPVDFSHAG-DLGIFANEATIEALDADIVQKGILP 248 (445)
T ss_pred HhCcc--ccceeeEecchHHHHHHHHhh-----hhcccccceeeecchhhcccc-ccccccCHHHHHHHHhhhhhccCCC
Confidence 99877 999999999999999999987 444 99999999999987642 11111111 01111111122333
Q ss_pred HhHHHHhcCCCCCchhHHHH-HHHhhhccccCCHHHHHHHHhhc-cCCCcHHHHHHHHHH-HhcCcccccCCccc---cc
Q 012210 314 GALLTAAYPLSSSPPYVFSW-LNNLISAEDMMHPELLKKLVLNN-FCTIPAKLILQLTTA-FREGGLRDRGGKFF---YK 387 (468)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~ 387 (468)
+..++..|.++....++..+ ...+..... +-.++.++.+. ..+.+...+.++.+. +..+.+.. +.+. ..
T Consensus 249 g~~ma~~F~mLrpndliw~~fV~nyl~ge~---pl~fdllyWn~dst~~~~~~~~~~Lrn~y~~N~l~~--g~~~v~G~~ 323 (445)
T COG3243 249 GWYMAIVFFLLRPNDLIWNYFVNNYLDGEQ---PLPFDLLYWNADSTRLPGAAHSEYLRNFYLENRLIR--GGLEVSGTM 323 (445)
T ss_pred hHHHHHHHHhcCccccchHHHHHHhcCCCC---CCchhHHHhhCCCccCchHHHHHHHHHHHHhChhhc--cceEECCEE
Confidence 45555566655554444433 333333322 22244444433 246778888887754 44444433 2222 23
Q ss_pred cccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCccccccc--ccchhhHHH----HHHHHH
Q 012210 388 DHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGG--RMAVEQVYP----CIVQFL 461 (468)
Q Consensus 388 ~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~--~~~pe~v~~----~I~~FL 461 (468)
-++.+|+||++++.|++|.|+|+.++....+.+++ +++++.. ++||... +.+ .+...+.+. .+.+|+
T Consensus 324 VdL~~It~pvy~~a~~~DhI~P~~Sv~~g~~l~~g-~~~f~l~---~sGHIa~---vVN~p~~~k~~~w~n~~~~~~~Wl 396 (445)
T COG3243 324 VDLGDITCPVYNLAAEEDHIAPWSSVYLGARLLGG-EVTFVLS---RSGHIAG---VVNPPGNAKYQYWTNLPADAEAWL 396 (445)
T ss_pred echhhcccceEEEeecccccCCHHHHHHHHHhcCC-ceEEEEe---cCceEEE---EeCCcchhhhhcCCCCcchHHHHH
Confidence 48999999999999999999999999999999998 6677774 5566443 333 122233444 666777
Q ss_pred hhc
Q 012210 462 GRY 464 (468)
Q Consensus 462 ~~~ 464 (468)
.+.
T Consensus 397 ~~a 399 (445)
T COG3243 397 SGA 399 (445)
T ss_pred Hhh
Confidence 644
|
|
| >PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.61 E-value=6.4e-16 Score=145.02 Aligned_cols=223 Identities=20% Similarity=0.289 Sum_probs=124.1
Q ss_pred ceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHh
Q 012210 185 QLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSR 264 (468)
Q Consensus 185 y~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~ 264 (468)
|.|+++|.+|.+..-+. ++..+.++..+|+.+.+++++++.+.+ +++++||||||.+++.||+.
T Consensus 1 f~vi~~d~rG~g~S~~~--------------~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~vG~S~Gg~~~~~~a~~ 64 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPH--------------WDPDFPDYTTDDLAADLEALREALGIK--KINLVGHSMGGMLALEYAAQ 64 (230)
T ss_dssp EEEEEEECTTSTTSSSC--------------CGSGSCTHCHHHHHHHHHHHHHHHTTS--SEEEEEETHHHHHHHHHHHH
T ss_pred CEEEEEeCCCCCCCCCC--------------ccCCcccccHHHHHHHHHHHHHHhCCC--CeEEEEECCChHHHHHHHHH
Confidence 78999999998663211 223445555688888888888888887 89999999999999999999
Q ss_pred cCCCCCcccccceeEEcccc--ccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcC-CCC-CchhHHHHHHHhhhc
Q 012210 265 CGFEGRESRLAAIVTLASSL--DYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYP-LSS-SPPYVFSWLNNLISA 340 (468)
Q Consensus 265 ~~~~~~p~~V~~lVllap~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~l~~~~~~ 340 (468)
| |++|+++|+++++. ........... ......+...... ... .......+.......
T Consensus 65 ~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (230)
T PF00561_consen 65 Y-----PERVKKLVLISPPPDLPDGLWNRIWPR--------------GNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAY 125 (230)
T ss_dssp S-----GGGEEEEEEESESSHHHHHHHHHCHHH--------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred C-----chhhcCcEEEeeeccchhhhhHHHHhh--------------hhhhhhHHHhhhccccccchhhhhhhhhheeec
Confidence 8 89999999998862 10000000000 0000000000000 000 000000000000000
Q ss_pred cccCCHHHHHHHHhhcc-C-CCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecCCCCcCCHHHHHHHHH
Q 012210 341 EDMMHPELLKKLVLNNF-C-TIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVK 418 (468)
Q Consensus 341 ~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~ 418 (468)
......+.......... . ..+......+.... .+....+....+.+|++|+|+++|+.|.++|++....+.+
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~ 199 (230)
T PF00561_consen 126 DREFVEDFLKQFQSQQYARFAETDAFDNMFWNAL------GYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAK 199 (230)
T ss_dssp HHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHHH------HHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHH
T ss_pred cCccccchhhccchhhhhHHHHHHHHhhhccccc------cccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHH
Confidence 00000000000000000 0 00000000000000 0000112234677899999999999999999999999999
Q ss_pred hCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHH
Q 012210 419 LLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIV 458 (468)
Q Consensus 419 ~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~ 458 (468)
.+|+. +++++ +++||..+.+ .++++.+.|.
T Consensus 200 ~~~~~--~~~~~--~~~GH~~~~~------~~~~~~~~i~ 229 (230)
T PF00561_consen 200 LIPNS--QLVLI--EGSGHFAFLE------GPDEFNEIII 229 (230)
T ss_dssp HSTTE--EEEEE--TTCCSTHHHH------SHHHHHHHHH
T ss_pred hcCCC--EEEEC--CCCChHHHhc------CHHhhhhhhc
Confidence 99986 78888 8889999987 8888888775
|
; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A .... |
| >PRK05077 frsA fermentation/respiration switch protein; Reviewed | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.8e-14 Score=147.03 Aligned_cols=204 Identities=14% Similarity=0.097 Sum_probs=125.4
Q ss_pred cchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEE
Q 012210 168 IQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLL 247 (468)
Q Consensus 168 ~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~ 247 (468)
+.+..+++.|+ ..||.|+++|++|++..-. .. ...+.. ....++++++......+..+++
T Consensus 209 ~~~~~~~~~La---~~Gy~vl~~D~pG~G~s~~----------~~---~~~d~~----~~~~avld~l~~~~~vd~~ri~ 268 (414)
T PRK05077 209 DYYRLFRDYLA---PRGIAMLTIDMPSVGFSSK----------WK---LTQDSS----LLHQAVLNALPNVPWVDHTRVA 268 (414)
T ss_pred hhHHHHHHHHH---hCCCEEEEECCCCCCCCCC----------CC---ccccHH----HHHHHHHHHHHhCcccCcccEE
Confidence 34566677787 8999999999999865211 00 011111 2335778888877655556999
Q ss_pred EEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCc
Q 012210 248 AIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSP 327 (468)
Q Consensus 248 lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (468)
++||||||.+++.+|..+ +++|+++|+++++........ ... ...+
T Consensus 269 l~G~S~GG~~Al~~A~~~-----p~ri~a~V~~~~~~~~~~~~~--~~~---------~~~p------------------ 314 (414)
T PRK05077 269 AFGFRFGANVAVRLAYLE-----PPRLKAVACLGPVVHTLLTDP--KRQ---------QQVP------------------ 314 (414)
T ss_pred EEEEChHHHHHHHHHHhC-----CcCceEEEEECCccchhhcch--hhh---------hhch------------------
Confidence 999999999999999875 779999999988753211000 000 0000
Q ss_pred hhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccc-cCccCccEEEEecCCCC
Q 012210 328 PYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDH-IHKCNIPILAIAGDQDL 406 (468)
Q Consensus 328 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~I~vPvLiI~G~~D~ 406 (468)
......+...+... ..+.+.+ ......+. +. .... ..+|++|+|+|+|++|.
T Consensus 315 ~~~~~~la~~lg~~-~~~~~~l----------------~~~l~~~s---l~-------~~~~l~~~i~~PvLiI~G~~D~ 367 (414)
T PRK05077 315 EMYLDVLASRLGMH-DASDEAL----------------RVELNRYS---LK-------VQGLLGRRCPTPMLSGYWKNDP 367 (414)
T ss_pred HHHHHHHHHHhCCC-CCChHHH----------------HHHhhhcc---ch-------hhhhhccCCCCcEEEEecCCCC
Confidence 00000000000000 0011111 11111100 00 0011 25799999999999999
Q ss_pred cCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 407 ICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 407 ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
++|++.++.+.+.+++. +++++ |++ .+.+ .++++.+.|.+||+++.
T Consensus 368 ivP~~~a~~l~~~~~~~--~l~~i--~~~---~~~e------~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 368 FSPEEDSRLIASSSADG--KLLEI--PFK---PVYR------NFDKALQEISDWLEDRL 413 (414)
T ss_pred CCCHHHHHHHHHhCCCC--eEEEc--cCC---CccC------CHHHHHHHHHHHHHHHh
Confidence 99999999999999987 77877 554 4444 77999999999998764
|
|
| >PLN02894 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.61 E-value=7.3e-14 Score=143.72 Aligned_cols=71 Identities=18% Similarity=0.227 Sum_probs=57.7
Q ss_pred cccccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 386 YKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 386 ~~~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
....+.+|++|+++|+|++|.+++ .....+.+.++. ..+++++ +++||+.|.| +|+.|++.|.+|++.+.
T Consensus 317 ~~~~l~~I~vP~liI~G~~D~i~~-~~~~~~~~~~~~-~~~~~~i--~~aGH~~~~E------~P~~f~~~l~~~~~~~~ 386 (402)
T PLN02894 317 LLESASEWKVPTTFIYGRHDWMNY-EGAVEARKRMKV-PCEIIRV--PQGGHFVFLD------NPSGFHSAVLYACRKYL 386 (402)
T ss_pred HhhhcccCCCCEEEEEeCCCCCCc-HHHHHHHHHcCC-CCcEEEe--CCCCCeeecc------CHHHHHHHHHHHHHHhc
Confidence 345688899999999999998775 556666666643 2377777 9999999998 99999999999998775
Q ss_pred C
Q 012210 466 S 466 (468)
Q Consensus 466 ~ 466 (468)
+
T Consensus 387 ~ 387 (402)
T PLN02894 387 S 387 (402)
T ss_pred c
Confidence 4
|
|
| >PRK06765 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.7e-14 Score=145.67 Aligned_cols=71 Identities=23% Similarity=0.276 Sum_probs=61.5
Q ss_pred ccccccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCC--ceeEEEecCCC-CCCCCcccccccccchhhHHHHHHHHH
Q 012210 385 FYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPED--LVTYKVFGEPS-GPHYAHYDLVGGRMAVEQVYPCIVQFL 461 (468)
Q Consensus 385 ~~~~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~--~~~~~v~~~~~-agH~~H~e~~~~~~~pe~v~~~I~~FL 461 (468)
++...+.+|++|+|+|+|++|.++|++..+++.+.+++. +.+++++ ++ .||..|++ +|+++.+.|.+||
T Consensus 314 dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I--~s~~GH~~~le------~p~~~~~~I~~FL 385 (389)
T PRK06765 314 SLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEI--ESINGHMAGVF------DIHLFEKKIYEFL 385 (389)
T ss_pred CHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEE--CCCCCcchhhc------CHHHHHHHHHHHH
Confidence 345678899999999999999999999999999999741 3477777 75 89999998 9999999999999
Q ss_pred hh
Q 012210 462 GR 463 (468)
Q Consensus 462 ~~ 463 (468)
++
T Consensus 386 ~~ 387 (389)
T PRK06765 386 NR 387 (389)
T ss_pred cc
Confidence 75
|
|
| >KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.60 E-value=6.9e-15 Score=146.52 Aligned_cols=251 Identities=21% Similarity=0.181 Sum_probs=137.1
Q ss_pred ccccccccccccchhhHHHHHHhhhhc-CceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEE-GQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYI 235 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~-Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l 235 (468)
++-.|+|.+-..+++.....|. .+ |+.|+|.|++|++.. . ..+ .+.. |+. .+....+..+
T Consensus 61 vlllHGF~~~~~~w~~~~~~L~---~~~~~~v~aiDl~G~g~~-s-~~~----~~~~-----y~~-----~~~v~~i~~~ 121 (326)
T KOG1454|consen 61 VLLLHGFGASSFSWRRVVPLLS---KAKGLRVLAIDLPGHGYS-S-PLP----RGPL-----YTL-----RELVELIRRF 121 (326)
T ss_pred EEEeccccCCcccHhhhccccc---cccceEEEEEecCCCCcC-C-CCC----CCCc-----eeh-----hHHHHHHHHH
Confidence 3555666665566677666666 33 699999999997521 1 100 1111 222 3334444444
Q ss_pred HhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCccccccee---EEccccccCCchhh--HHhhcccCchhhhcCCCC
Q 012210 236 RAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIV---TLASSLDYTSSKST--LKLLLPLADPAQALNVPV 310 (468)
Q Consensus 236 ~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lV---llap~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 310 (468)
....... +++++|||+||.+++.+|+.| |+.|+++| +++++......... ...+.........
T Consensus 122 ~~~~~~~--~~~lvghS~Gg~va~~~Aa~~-----P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 189 (326)
T KOG1454|consen 122 VKEVFVE--PVSLVGHSLGGIVALKAAAYY-----PETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALEL----- 189 (326)
T ss_pred HHhhcCc--ceEEEEeCcHHHHHHHHHHhC-----cccccceeeecccccccccCCcchhHHHHhhhhhccHhhh-----
Confidence 4444443 799999999999999999998 99999999 66565544332211 0111000000000
Q ss_pred cchHhHHHHhcCCCCCch---hHHHHHHHhhh--ccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCc--
Q 012210 311 VPLGALLTAAYPLSSSPP---YVFSWLNNLIS--AEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGK-- 383 (468)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 383 (468)
..+.....+ +.......... .......+.......... ........+. .+......
T Consensus 190 ---------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~--~~~~~~~~~~ 252 (326)
T KOG1454|consen 190 ---------LIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPV------KEHFHRDARL--SLFLELLGFD 252 (326)
T ss_pred ---------cCccccccchhheeHhhhcceeeeccccccchhhhhhheeccc------ccchhhhhee--eEEEeccCcc
Confidence 000000000 00000000000 000000111111000000 0000000000 00000011
Q ss_pred cccccccCccC-ccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 012210 384 FFYKDHIHKCN-IPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 462 (468)
Q Consensus 384 ~~~~~~l~~I~-vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~ 462 (468)
......+.+|. ||+|+++|++|.++|.+.++.+.+.+|+. +++++ +++||..|.| .|+.+.+.|..|+.
T Consensus 253 ~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~pn~--~~~~I--~~~gH~~h~e------~Pe~~~~~i~~Fi~ 322 (326)
T KOG1454|consen 253 ENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKLPNA--ELVEI--PGAGHLPHLE------RPEEVAALLRSFIA 322 (326)
T ss_pred chHHHhhccccCCceEEEEcCcCCccCHHHHHHHHhhCCCc--eEEEe--CCCCcccccC------CHHHHHHHHHHHHH
Confidence 11123566776 99999999999999999999999999877 88888 9999999998 99999999999998
Q ss_pred hcc
Q 012210 463 RYD 465 (468)
Q Consensus 463 ~~~ 465 (468)
.+.
T Consensus 323 ~~~ 325 (326)
T KOG1454|consen 323 RLR 325 (326)
T ss_pred Hhc
Confidence 753
|
|
| >PRK10985 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.7e-14 Score=142.96 Aligned_cols=253 Identities=15% Similarity=0.118 Sum_probs=138.0
Q ss_pred cccccccccc--ccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHH
Q 012210 157 LLERRQSSAI--AIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEY 234 (468)
Q Consensus 157 ll~~~~~~G~--~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~ 234 (468)
++-.|++.|- ..+++.++..|+ .+||+|+++|+.|+++.-. .....+ .... . +|+..++++
T Consensus 61 vll~HG~~g~~~~~~~~~~~~~l~---~~G~~v~~~d~rG~g~~~~----------~~~~~~--~~~~-~-~D~~~~i~~ 123 (324)
T PRK10985 61 LVLFHGLEGSFNSPYAHGLLEAAQ---KRGWLGVVMHFRGCSGEPN----------RLHRIY--HSGE-T-EDARFFLRW 123 (324)
T ss_pred EEEeCCCCCCCcCHHHHHHHHHHH---HCCCEEEEEeCCCCCCCcc----------CCcceE--CCCc-h-HHHHHHHHH
Confidence 4553444332 234666788888 8999999999999865210 000001 1112 3 899999999
Q ss_pred HHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchH
Q 012210 235 IRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLG 314 (468)
Q Consensus 235 l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (468)
++.+.+.. +++++||||||.++..+++.++ ....+.++|+++++.+.......+.... .. ...
T Consensus 124 l~~~~~~~--~~~~vG~S~GG~i~~~~~~~~~---~~~~~~~~v~i~~p~~~~~~~~~~~~~~------~~------~~~ 186 (324)
T PRK10985 124 LQREFGHV--PTAAVGYSLGGNMLACLLAKEG---DDLPLDAAVIVSAPLMLEACSYRMEQGF------SR------VYQ 186 (324)
T ss_pred HHHhCCCC--CEEEEEecchHHHHHHHHHhhC---CCCCccEEEEEcCCCCHHHHHHHHhhhH------HH------HHH
Confidence 99876654 8999999999999998888751 1124899999998876432211111000 00 000
Q ss_pred hHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCc------ccccc
Q 012210 315 ALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGK------FFYKD 388 (468)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 388 (468)
..+.... ...+.......... ...+.+.+... ..+..+...+... +..+... .....
T Consensus 187 ~~l~~~l-----~~~~~~~~~~~~~~-~~~~~~~~~~~----------~~~~~fd~~~~~~-~~g~~~~~~~y~~~~~~~ 249 (324)
T PRK10985 187 RYLLNLL-----KANAARKLAAYPGT-LPINLAQLKSV----------RRLREFDDLITAR-IHGFADAIDYYRQCSALP 249 (324)
T ss_pred HHHHHHH-----HHHHHHHHHhcccc-ccCCHHHHhcC----------CcHHHHhhhheec-cCCCCCHHHHHHHCChHH
Confidence 0000000 00000000000000 00011111000 0011111111100 0000000 11234
Q ss_pred ccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 389 HIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 389 ~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
.+.+|++|+|+|+|++|.+++++....+.+..++. +++++ +++||+++.+-.+. ....+.-+.+.+|+....
T Consensus 250 ~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~--~~~~~--~~~GH~~~~~g~~~-~~~~w~~~~~~~~~~~~~ 321 (324)
T PRK10985 250 LLNQIRKPTLIIHAKDDPFMTHEVIPKPESLPPNV--EYQLT--EHGGHVGFVGGTLL-KPQMWLEQRIPDWLTTYL 321 (324)
T ss_pred HHhCCCCCEEEEecCCCCCCChhhChHHHHhCCCe--EEEEC--CCCCceeeCCCCCC-CCCccHHHHHHHHHHHhh
Confidence 67899999999999999999999888887777764 77777 88999999873211 122567788899987654
|
|
| >TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.8e-14 Score=139.40 Aligned_cols=221 Identities=17% Similarity=0.124 Sum_probs=129.5
Q ss_pred ccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhc-CCCC
Q 012210 165 AIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQS-KPKD 243 (468)
Q Consensus 165 G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~-~~~~ 243 (468)
|.......+++.|+ .+||.|+++|+.|++... +. ..++.++. +|+.+++++++... +.+
T Consensus 41 g~~~~~~~la~~l~---~~G~~v~~~Dl~G~G~S~----------~~-----~~~~~~~~-~d~~~~~~~l~~~~~g~~- 100 (274)
T TIGR03100 41 GSHRQFVLLARRLA---EAGFPVLRFDYRGMGDSE----------GE-----NLGFEGID-ADIAAAIDAFREAAPHLR- 100 (274)
T ss_pred CchhHHHHHHHHHH---HCCCEEEEeCCCCCCCCC----------CC-----CCCHHHHH-HHHHHHHHHHHhhCCCCC-
Confidence 33344567788888 899999999999997631 11 12355665 99999999998764 333
Q ss_pred CcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHH-HHhcC
Q 012210 244 GKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALL-TAAYP 322 (468)
Q Consensus 244 ~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 322 (468)
+++++||||||.+++.+|.. +++|+++|+++|.......... ..+ ..++ ....
T Consensus 101 -~i~l~G~S~Gg~~a~~~a~~------~~~v~~lil~~p~~~~~~~~~~-~~~-----------------~~~~~~~~~- 154 (274)
T TIGR03100 101 -RIVAWGLCDAASAALLYAPA------DLRVAGLVLLNPWVRTEAAQAA-SRI-----------------RHYYLGQLL- 154 (274)
T ss_pred -cEEEEEECHHHHHHHHHhhh------CCCccEEEEECCccCCcccchH-HHH-----------------HHHHHHHHh-
Confidence 89999999999999999865 5789999999886432211000 000 0000 0000
Q ss_pred CCCCchhHHHHHHHhhhccccCCHH-HHHHHHhh-----ccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCcc
Q 012210 323 LSSSPPYVFSWLNNLISAEDMMHPE-LLKKLVLN-----NFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIP 396 (468)
Q Consensus 323 ~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP 396 (468)
.. ..+..+.... .+.. ....+... .....+.. .... .+....+.++++|
T Consensus 155 ---~~----~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--------------~~~~~~l~~~~~P 209 (274)
T TIGR03100 155 ---SA----DFWRKLLSGE--VNLGSSLRGLGDALLKARQKGDEVAH--GGLA--------------ERMKAGLERFQGP 209 (274)
T ss_pred ---Ch----HHHHHhcCCC--ccHHHHHHHHHHHHHhhhhcCCCccc--chHH--------------HHHHHHHHhcCCc
Confidence 00 0001110000 0100 01111000 00000000 0001 1122456678999
Q ss_pred EEEEecCCCCcCCHHH-----HHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 397 ILAIAGDQDLICPPEA-----VEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 397 vLiI~G~~D~ivp~~~-----~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
+|+++|..|...+.-. ...+.+.+....++++.+ ++++|+.+.+ ..++++.+.|.+||++
T Consensus 210 ~ll~~g~~D~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~--~~~~H~l~~e-----~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 210 VLFILSGNDLTAQEFADSVLGEPAWRGALEDPGIERVEI--DGADHTFSDR-----VWREWVAARTTEWLRR 274 (274)
T ss_pred EEEEEcCcchhHHHHHHHhccChhhHHHhhcCCeEEEec--CCCCcccccH-----HHHHHHHHHHHHHHhC
Confidence 9999999998864221 145556564344578877 9999988776 4779999999999963
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. |
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=99.58 E-value=4.6e-14 Score=166.69 Aligned_cols=253 Identities=14% Similarity=0.215 Sum_probs=138.4
Q ss_pred cccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCC
Q 012210 162 QSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKP 241 (468)
Q Consensus 162 ~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~ 241 (468)
++.|-...++.+...|. .+|+|+++|+.|++........ . .......++++.++ +++.++++.+..
T Consensus 1379 G~~~s~~~w~~~~~~L~----~~~rVi~~Dl~G~G~S~~~~~~----~-~~~~~~~~si~~~a-~~l~~ll~~l~~---- 1444 (1655)
T PLN02980 1379 GFLGTGEDWIPIMKAIS----GSARCISIDLPGHGGSKIQNHA----K-ETQTEPTLSVELVA-DLLYKLIEHITP---- 1444 (1655)
T ss_pred CCCCCHHHHHHHHHHHh----CCCEEEEEcCCCCCCCCCcccc----c-cccccccCCHHHHH-HHHHHHHHHhCC----
Confidence 33333344445555554 6799999999999763110000 0 00011234566765 777777776532
Q ss_pred CCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhc
Q 012210 242 KDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAY 321 (468)
Q Consensus 242 ~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (468)
++++++||||||.+++.++.+| |++|+++|++++........ ...+........ ...+ .
T Consensus 1445 --~~v~LvGhSmGG~iAl~~A~~~-----P~~V~~lVlis~~p~~~~~~--~~~~~~~~~~~~---------~~~l---~ 1503 (1655)
T PLN02980 1445 --GKVTLVGYSMGARIALYMALRF-----SDKIEGAVIISGSPGLKDEV--ARKIRSAKDDSR---------ARML---I 1503 (1655)
T ss_pred --CCEEEEEECHHHHHHHHHHHhC-----hHhhCEEEEECCCCccCchH--HHHHHhhhhhHH---------HHHH---H
Confidence 3999999999999999999998 89999999997643322111 000000000000 0000 0
Q ss_pred CCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEe
Q 012210 322 PLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIA 401 (468)
Q Consensus 322 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~ 401 (468)
. .....+...|+...........+. +...............+......+... ...++...+.+|++|+|+|+
T Consensus 1504 ~-~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~dl~~~L~~I~~PtLlI~ 1575 (1655)
T PLN02980 1504 D-HGLEIFLENWYSGELWKSLRNHPH-FNKIVASRLLHKDVPSLAKLLSDLSIG------RQPSLWEDLKQCDTPLLLVV 1575 (1655)
T ss_pred h-hhHHHHHHHhccHHHhhhhccCHH-HHHHHHHHHhcCCHHHHHHHHHHhhhc------ccchHHHHHhhCCCCEEEEE
Confidence 0 000001111111100000000111 111111111111111111111111100 01223456899999999999
Q ss_pred cCCCCcCCHHHHHHHHHhCCCC----------ceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccC
Q 012210 402 GDQDLICPPEAVEETVKLLPED----------LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 466 (468)
Q Consensus 402 G~~D~ivp~~~~~~l~~~ip~~----------~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~ 466 (468)
|++|.+++ +.+.++.+.+++. ..+++++ |++||+.|+| +|+.+.+.|.+||.+...
T Consensus 1576 Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI--~~aGH~~~lE------~Pe~f~~~I~~FL~~~~~ 1641 (1655)
T PLN02980 1576 GEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEI--PNCGHAVHLE------NPLPVIRALRKFLTRLHN 1641 (1655)
T ss_pred ECCCCccH-HHHHHHHHHccccccccccccccceEEEEE--CCCCCchHHH------CHHHHHHHHHHHHHhccc
Confidence 99999885 6677888888763 1467888 9999999998 999999999999997653
|
|
| >TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Probab=99.56 E-value=9.9e-14 Score=137.64 Aligned_cols=81 Identities=16% Similarity=0.001 Sum_probs=59.1
Q ss_pred hcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHH
Q 012210 182 EEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAM 261 (468)
Q Consensus 182 ~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~ 261 (468)
..+|+|+++|+.|++..-.. ....+++..++. +|+..+++++ +.. +++++||||||.+++.+
T Consensus 51 ~~~~~vi~~D~~G~G~S~~~-----------~~~~~~~~~~~~-~dl~~l~~~l----~~~--~~~lvG~S~GG~ia~~~ 112 (306)
T TIGR01249 51 PETYRIVLFDQRGCGKSTPH-----------ACLEENTTWDLV-ADIEKLREKL----GIK--NWLVFGGSWGSTLALAY 112 (306)
T ss_pred ccCCEEEEECCCCCCCCCCC-----------CCcccCCHHHHH-HHHHHHHHHc----CCC--CEEEEEECHHHHHHHHH
Confidence 57999999999998753110 001123455554 6666666555 333 89999999999999999
Q ss_pred HHhcCCCCCcccccceeEEccccc
Q 012210 262 LSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 262 a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
+.++ |++|+++|++++...
T Consensus 113 a~~~-----p~~v~~lvl~~~~~~ 131 (306)
T TIGR01249 113 AQTH-----PEVVTGLVLRGIFLL 131 (306)
T ss_pred HHHC-----hHhhhhheeeccccC
Confidence 9998 889999999987543
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. |
| >PRK10566 esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.1e-13 Score=132.74 Aligned_cols=216 Identities=16% Similarity=0.185 Sum_probs=125.8
Q ss_pred ccccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHH
Q 012210 155 SSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEY 234 (468)
Q Consensus 155 ~~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~ 234 (468)
+.++..+++.+-...+..+++.|+ ..||.|++||+.+++.+...... .....+ |..-....+|+.+++++
T Consensus 28 p~vv~~HG~~~~~~~~~~~~~~l~---~~G~~v~~~d~~g~G~~~~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~ 97 (249)
T PRK10566 28 PTVFFYHGFTSSKLVYSYFAVALA---QAGFRVIMPDAPMHGARFSGDEA------RRLNHF-WQILLQNMQEFPTLRAA 97 (249)
T ss_pred CEEEEeCCCCcccchHHHHHHHHH---hCCCEEEEecCCcccccCCCccc------cchhhH-HHHHHHHHHHHHHHHHH
Confidence 446665666555566777888888 89999999999988653221100 000000 11111123788888999
Q ss_pred HHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchH
Q 012210 235 IRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLG 314 (468)
Q Consensus 235 l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (468)
+..+...+..+++++||||||.+++.++.++ +.+.+.+.+.++..+..
T Consensus 98 l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~------~~~~~~~~~~~~~~~~~-------------------------- 145 (249)
T PRK10566 98 IREEGWLLDDRLAVGGASMGGMTALGIMARH------PWVKCVASLMGSGYFTS-------------------------- 145 (249)
T ss_pred HHhcCCcCccceeEEeecccHHHHHHHHHhC------CCeeEEEEeeCcHHHHH--------------------------
Confidence 8876444446999999999999999998873 44555554433211100
Q ss_pred hHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCcc-
Q 012210 315 ALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKC- 393 (468)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I- 393 (468)
+....++... . ..+. ...........+. .++....+.++
T Consensus 146 -~~~~~~~~~~-------------~----~~~~-------------~~~~~~~~~~~~~---------~~~~~~~~~~i~ 185 (249)
T PRK10566 146 -LARTLFPPLI-------------P----ETAA-------------QQAEFNNIVAPLA---------EWEVTHQLEQLA 185 (249)
T ss_pred -HHHHhccccc-------------c----cccc-------------cHHHHHHHHHHHh---------hcChhhhhhhcC
Confidence 0000000000 0 0000 0000000001000 01112345566
Q ss_pred CccEEEEecCCCCcCCHHHHHHHHHhCCCCc----eeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 394 NIPILAIAGDQDLICPPEAVEETVKLLPEDL----VTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 394 ~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~----~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
++|+|+++|++|.++|++.++++++.++.+. ++++.+ ++++|..- ....+.+.+||+++
T Consensus 186 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~--~~~~H~~~----------~~~~~~~~~fl~~~ 248 (249)
T PRK10566 186 DRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWE--PGVRHRIT----------PEALDAGVAFFRQH 248 (249)
T ss_pred CCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEec--CCCCCccC----------HHHHHHHHHHHHhh
Confidence 7999999999999999999999999887542 344554 88888632 34679999999875
|
|
| >KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.45 E-value=4.5e-13 Score=121.91 Aligned_cols=187 Identities=17% Similarity=0.298 Sum_probs=134.9
Q ss_pred cccccccccccccc-hhhHHHHHHhhhhcCceEeccCccccccCCccc-----hHHHhhcccceEeecCChhhHHhhhHH
Q 012210 156 SLLERRQSSAIAIQ-IRDLSQNLVNMIEEGQLSVSPQLFDLQERLFST-----IDDFQKQLDLIVQYDWDFDHYLEEDVP 229 (468)
Q Consensus 156 ~ll~~~~~~G~~~~-i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~-----~~~l~~~~~~~~~~D~~~~~~~~~D~~ 229 (468)
.|+..-...|+... ++..|+++| .+||.|+.||+|.. .+|... .+.|.++ .+.... ..|+.
T Consensus 41 ~li~i~DvfG~~~~n~r~~Adk~A---~~Gy~v~vPD~~~G-dp~~~~~~~~~~~~w~~~--------~~~~~~-~~~i~ 107 (242)
T KOG3043|consen 41 VLIVIQDVFGFQFPNTREGADKVA---LNGYTVLVPDFFRG-DPWSPSLQKSERPEWMKG--------HSPPKI-WKDIT 107 (242)
T ss_pred EEEEEEeeeccccHHHHHHHHHHh---cCCcEEEcchhhcC-CCCCCCCChhhhHHHHhc--------CCcccc-hhHHH
Confidence 45666678999877 999999999 99999999999875 445433 1222221 123232 38999
Q ss_pred HHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCC
Q 012210 230 AAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVP 309 (468)
Q Consensus 230 a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (468)
+++++|+.+.... +|+++|+||||.++..+... .+.+.+.|.+-|+..
T Consensus 108 ~v~k~lk~~g~~k--kIGv~GfCwGak~vv~~~~~------~~~f~a~v~~hps~~------------------------ 155 (242)
T KOG3043|consen 108 AVVKWLKNHGDSK--KIGVVGFCWGAKVVVTLSAK------DPEFDAGVSFHPSFV------------------------ 155 (242)
T ss_pred HHHHHHHHcCCcc--eeeEEEEeecceEEEEeecc------chhheeeeEecCCcC------------------------
Confidence 9999999775455 99999999999999888776 347788777655321
Q ss_pred CcchHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccc
Q 012210 310 VVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDH 389 (468)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (468)
+ ..+
T Consensus 156 -----------------------------------d-----------------------------------------~~D 159 (242)
T KOG3043|consen 156 -----------------------------------D-----------------------------------------SAD 159 (242)
T ss_pred -----------------------------------C-----------------------------------------hhH
Confidence 0 123
Q ss_pred cCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCce---eEEEecCCCCCC-CCc--cccc--ccccchhhHHHHHHHHH
Q 012210 390 IHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLV---TYKVFGEPSGPH-YAH--YDLV--GGRMAVEQVYPCIVQFL 461 (468)
Q Consensus 390 l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~---~~~v~~~~~agH-~~H--~e~~--~~~~~pe~v~~~I~~FL 461 (468)
..++++|+|++.|+.|.++|++....+.+.+..... +++++ ++.+| +.+ .+.. -.+.+.++.++.++.||
T Consensus 160 ~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f--~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf 237 (242)
T KOG3043|consen 160 IANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTF--SGVGHGFVARRANISSPEDKKAAEEAYQRFISWF 237 (242)
T ss_pred HhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEc--CCccchhhhhccCCCChhHHHHHHHHHHHHHHHH
Confidence 456789999999999999999999988888876543 46666 88888 333 1211 11235577899999999
Q ss_pred hhcc
Q 012210 462 GRYD 465 (468)
Q Consensus 462 ~~~~ 465 (468)
.++.
T Consensus 238 ~~y~ 241 (242)
T KOG3043|consen 238 KHYL 241 (242)
T ss_pred HHhh
Confidence 8764
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.44 E-value=7.8e-13 Score=142.29 Aligned_cols=65 Identities=11% Similarity=0.224 Sum_probs=57.0
Q ss_pred cCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 390 IHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 390 l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
+..++||+|+|+|++|.++|+...+.+.+.+++. .++++ +++|+.|.+ .|+.+.+.|.+|+.+..
T Consensus 229 ~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~--~~~~~---~~gH~~~~e------~p~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 229 ERYTDVPVQLIVPTGDPYVRPALYDDLSRWVPRL--WRREI---KAGHWLPMS------HPQVLAAAVAEFVDAVE 293 (582)
T ss_pred cCCccCceEEEEeCCCcccCHHHhccccccCCcc--eEEEc---cCCCcchhh------ChhHHHHHHHHHHHhcc
Confidence 5568999999999999999999999999888865 66665 479999998 89999999999998754
|
|
| >KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.42 E-value=5.2e-12 Score=122.10 Aligned_cols=245 Identities=16% Similarity=0.209 Sum_probs=144.8
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.++..|--..+++++..|+.. -|-.+++.|+..|+.. .+ + --++..+++ +|+..+++..+
T Consensus 55 ~i~lHGl~GS~~Nw~sv~k~Ls~~--l~~~v~~vd~RnHG~S-----------p~-~--~~h~~~~ma-~dv~~Fi~~v~ 117 (315)
T KOG2382|consen 55 AIILHGLLGSKENWRSVAKNLSRK--LGRDVYAVDVRNHGSS-----------PK-I--TVHNYEAMA-EDVKLFIDGVG 117 (315)
T ss_pred eEEecccccCCCCHHHHHHHhccc--ccCceEEEecccCCCC-----------cc-c--cccCHHHHH-HHHHHHHHHcc
Confidence 333334444456779999999843 3558889888888652 11 1 122466776 99999999998
Q ss_pred hhcCCCCCcEEEEEEehhH-HHHHHHHHhcCCCCCcccccceeEEcc-ccccCCchh-hHHhhcccCchhhhcCCCCcch
Q 012210 237 AQSKPKDGKLLAIGHSMGG-ILLYAMLSRCGFEGRESRLAAIVTLAS-SLDYTSSKS-TLKLLLPLADPAQALNVPVVPL 313 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG-~ia~~~a~~~~~~~~p~~V~~lVllap-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 313 (468)
..+.+. ++.++|||||| .+++..+..+ |..+..+|++.- |..+..... ....+..+.......+. .
T Consensus 118 ~~~~~~--~~~l~GHsmGG~~~~m~~t~~~-----p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~--~-- 186 (315)
T KOG2382|consen 118 GSTRLD--PVVLLGHSMGGVKVAMAETLKK-----PDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGV--S-- 186 (315)
T ss_pred cccccC--CceecccCcchHHHHHHHHHhc-----CcccceeEEEecCCccCCcccchHHHHHHHHHhccccccc--c--
Confidence 655555 99999999999 5566666554 888888888853 322222211 11111111111100000 0
Q ss_pred HhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccC----------CCcHHHHHHHHHHHhcCcccccCCc
Q 012210 314 GALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFC----------TIPAKLILQLTTAFREGGLRDRGGK 383 (468)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (468)
.....+...+.. ......+..++..++. ..+...+..+...+. .
T Consensus 187 -----------~~rke~~~~l~~------~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~---------~ 240 (315)
T KOG2382|consen 187 -----------RGRKEALKSLIE------VGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYE---------I 240 (315)
T ss_pred -----------ccHHHHHHHHHH------HhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHH---------h
Confidence 000000000000 0011111122111111 112222222222211 0
Q ss_pred ccccccc--CccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHH
Q 012210 384 FFYKDHI--HKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFL 461 (468)
Q Consensus 384 ~~~~~~l--~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL 461 (468)
..|...+ .....|||+++|.++..++.+.-..+.+.+|+. +++.+ +++||+.|.| .|+++...|.+|+
T Consensus 241 ~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp~~--e~~~l--d~aGHwVh~E------~P~~~~~~i~~Fl 310 (315)
T KOG2382|consen 241 LSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPRMEKIFPNV--EVHEL--DEAGHWVHLE------KPEEFIESISEFL 310 (315)
T ss_pred hcccccccccccccceeEEecCCCCCcChhHHHHHHHhccch--heeec--ccCCceeecC------CHHHHHHHHHHHh
Confidence 1122233 667899999999999999999999999999986 88888 8899999998 9999999999999
Q ss_pred hhcc
Q 012210 462 GRYD 465 (468)
Q Consensus 462 ~~~~ 465 (468)
.+++
T Consensus 311 ~~~~ 314 (315)
T KOG2382|consen 311 EEPE 314 (315)
T ss_pred cccC
Confidence 8765
|
|
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=99.39 E-value=6.9e-12 Score=109.46 Aligned_cols=140 Identities=26% Similarity=0.419 Sum_probs=102.0
Q ss_pred ccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcC
Q 012210 161 RQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSK 240 (468)
Q Consensus 161 ~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~ 240 (468)
|.+.+-...+..+++.|+ ++||.|+.+|..+++.. . ...++..+++.+.....
T Consensus 6 HG~~~~~~~~~~~~~~l~---~~G~~v~~~~~~~~~~~-----------------------~-~~~~~~~~~~~~~~~~~ 58 (145)
T PF12695_consen 6 HGWGGSRRDYQPLAEALA---EQGYAVVAFDYPGHGDS-----------------------D-GADAVERVLADIRAGYP 58 (145)
T ss_dssp CTTTTTTHHHHHHHHHHH---HTTEEEEEESCTTSTTS-----------------------H-HSHHHHHHHHHHHHHHC
T ss_pred CCCCCCHHHHHHHHHHHH---HCCCEEEEEecCCCCcc-----------------------c-hhHHHHHHHHHHHhhcC
Confidence 444445566778888888 99999999988776541 0 01344555555433211
Q ss_pred CCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHh
Q 012210 241 PKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAA 320 (468)
Q Consensus 241 ~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (468)
+..+++++|||+||.+++.++.+ .++++++|++++. ..
T Consensus 59 -~~~~i~l~G~S~Gg~~a~~~~~~------~~~v~~~v~~~~~---~~-------------------------------- 96 (145)
T PF12695_consen 59 -DPDRIILIGHSMGGAIAANLAAR------NPRVKAVVLLSPY---PD-------------------------------- 96 (145)
T ss_dssp -TCCEEEEEEETHHHHHHHHHHHH------STTESEEEEESES---SG--------------------------------
T ss_pred -CCCcEEEEEEccCcHHHHHHhhh------ccceeEEEEecCc---cc--------------------------------
Confidence 23599999999999999999987 5789999999871 00
Q ss_pred cCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEE
Q 012210 321 YPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAI 400 (468)
Q Consensus 321 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI 400 (468)
...+.+.++|++++
T Consensus 97 ------------------------------------------------------------------~~~~~~~~~pv~~i 110 (145)
T PF12695_consen 97 ------------------------------------------------------------------SEDLAKIRIPVLFI 110 (145)
T ss_dssp ------------------------------------------------------------------CHHHTTTTSEEEEE
T ss_pred ------------------------------------------------------------------hhhhhccCCcEEEE
Confidence 01123456799999
Q ss_pred ecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCC
Q 012210 401 AGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHY 438 (468)
Q Consensus 401 ~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~ 438 (468)
+|++|.++|++..+++++.++. .++++++ ++++|+
T Consensus 111 ~g~~D~~~~~~~~~~~~~~~~~-~~~~~~i--~g~~H~ 145 (145)
T PF12695_consen 111 HGENDPLVPPEQVRRLYEALPG-PKELYII--PGAGHF 145 (145)
T ss_dssp EETT-SSSHHHHHHHHHHHHCS-SEEEEEE--TTS-TT
T ss_pred EECCCCcCCHHHHHHHHHHcCC-CcEEEEe--CCCcCc
Confidence 9999999999999999999994 5688888 888885
|
... |
| >KOG2984 consensus Predicted hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.1e-12 Score=115.36 Aligned_cols=176 Identities=18% Similarity=0.265 Sum_probs=112.9
Q ss_pred hhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchh-hHHhhcccCchh
Q 012210 225 EEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKS-TLKLLLPLADPA 303 (468)
Q Consensus 225 ~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~-~~~~~~~~~~~~ 303 (468)
.+|...+++..+.. .. .++.++|+|-||..++..|+++ ++.|.++|+.++......... ..+.+ .+
T Consensus 98 ~~Da~~avdLM~aL-k~--~~fsvlGWSdGgiTalivAak~-----~e~v~rmiiwga~ayvn~~~~ma~kgi---Rd-- 164 (277)
T KOG2984|consen 98 MKDAEYAVDLMEAL-KL--EPFSVLGWSDGGITALIVAAKG-----KEKVNRMIIWGAAAYVNHLGAMAFKGI---RD-- 164 (277)
T ss_pred HHhHHHHHHHHHHh-CC--CCeeEeeecCCCeEEEEeeccC-----hhhhhhheeecccceecchhHHHHhch---HH--
Confidence 36666666655443 22 3999999999999999999998 899999999987655443211 11100 00
Q ss_pred hhcCCCCcchHhHHHHhcCCCCCchhHHHHHHHhhhcc-ccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCccccc-C
Q 012210 304 QALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAE-DMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDR-G 381 (468)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 381 (468)
+..|........ ....++.+.. ....|...... |... +
T Consensus 165 --------------------------v~kWs~r~R~P~e~~Yg~e~f~~------------~wa~wvD~v~q--f~~~~d 204 (277)
T KOG2984|consen 165 --------------------------VNKWSARGRQPYEDHYGPETFRT------------QWAAWVDVVDQ--FHSFCD 204 (277)
T ss_pred --------------------------HhhhhhhhcchHHHhcCHHHHHH------------HHHHHHHHHHH--HhhcCC
Confidence 111211100000 0011111111 11111111110 1111 1
Q ss_pred CccccccccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHH
Q 012210 382 GKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFL 461 (468)
Q Consensus 382 ~~~~~~~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL 461 (468)
+.+ .+-.+.+|+||+||++|+.|++|+...+--+..+.+.+ +++++ |.++|..|+. -+++|+..+.+||
T Consensus 205 G~f-Cr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a--~~~~~--peGkHn~hLr------ya~eFnklv~dFl 273 (277)
T KOG2984|consen 205 GRF-CRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLA--KVEIH--PEGKHNFHLR------YAKEFNKLVLDFL 273 (277)
T ss_pred Cch-HhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcccc--eEEEc--cCCCcceeee------chHHHHHHHHHHH
Confidence 222 35678999999999999999999999999999999988 88888 9999999997 6799999999999
Q ss_pred hhc
Q 012210 462 GRY 464 (468)
Q Consensus 462 ~~~ 464 (468)
++.
T Consensus 274 ~~~ 276 (277)
T KOG2984|consen 274 KST 276 (277)
T ss_pred hcc
Confidence 875
|
|
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.34 E-value=8.2e-12 Score=135.31 Aligned_cols=206 Identities=20% Similarity=0.165 Sum_probs=132.4
Q ss_pred chhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEE
Q 012210 169 QIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLA 248 (468)
Q Consensus 169 ~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~l 248 (468)
......+.|+ ..||.|+.|+..|..+. -.+|.+... .+|...++ +|+.++++++......+.+++++
T Consensus 411 ~~~~~~q~~~---~~G~~V~~~n~RGS~Gy----G~~F~~~~~----~~~g~~~~--~D~~~~~~~l~~~~~~d~~ri~i 477 (620)
T COG1506 411 SFNPEIQVLA---SAGYAVLAPNYRGSTGY----GREFADAIR----GDWGGVDL--EDLIAAVDALVKLPLVDPERIGI 477 (620)
T ss_pred ccchhhHHHh---cCCeEEEEeCCCCCCcc----HHHHHHhhh----hccCCccH--HHHHHHHHHHHhCCCcChHHeEE
Confidence 3455566777 99999999999988663 222222111 12233333 89999999887776666679999
Q ss_pred EEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCch
Q 012210 249 IGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPP 328 (468)
Q Consensus 249 vGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (468)
.|||+||.+++..+.+ .+.+++.|...+..+..... . ...
T Consensus 478 ~G~SyGGymtl~~~~~------~~~f~a~~~~~~~~~~~~~~------~--------------------------~~~-- 517 (620)
T COG1506 478 TGGSYGGYMTLLAATK------TPRFKAAVAVAGGVDWLLYF------G--------------------------EST-- 517 (620)
T ss_pred eccChHHHHHHHHHhc------CchhheEEeccCcchhhhhc------c--------------------------ccc--
Confidence 9999999999999988 44788888877644311100 0 000
Q ss_pred hHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecCCCCcC
Q 012210 329 YVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLIC 408 (468)
Q Consensus 329 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~D~iv 408 (468)
..+.. ..+... ..... ....+... .......+|++|+|+|||++|..|
T Consensus 518 --~~~~~---------~~~~~~----~~~~~-~~~~~~~~----------------sp~~~~~~i~~P~LliHG~~D~~v 565 (620)
T COG1506 518 --EGLRF---------DPEENG----GGPPE-DREKYEDR----------------SPIFYADNIKTPLLLIHGEEDDRV 565 (620)
T ss_pred --hhhcC---------CHHHhC----CCccc-ChHHHHhc----------------ChhhhhcccCCCEEEEeecCCccC
Confidence 00000 000000 00000 00000000 012457889999999999999999
Q ss_pred CHHHHHHHHHhCCCC--ceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccC
Q 012210 409 PPEAVEETVKLLPED--LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 466 (468)
Q Consensus 409 p~~~~~~l~~~ip~~--~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~ 466 (468)
|.+++..+.+.+... .++++++ |+.+|..-.. ++...++..+++|++++..
T Consensus 566 ~~~q~~~~~~aL~~~g~~~~~~~~--p~e~H~~~~~-----~~~~~~~~~~~~~~~~~~~ 618 (620)
T COG1506 566 PIEQAEQLVDALKRKGKPVELVVF--PDEGHGFSRP-----ENRVKVLKEILDWFKRHLK 618 (620)
T ss_pred ChHHHHHHHHHHHHcCceEEEEEe--CCCCcCCCCc-----hhHHHHHHHHHHHHHHHhc
Confidence 999999999888643 4566666 8888866552 3678899999999998864
|
|
| >COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.4e-11 Score=118.94 Aligned_cols=236 Identities=22% Similarity=0.304 Sum_probs=135.0
Q ss_pred ccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcE
Q 012210 167 AIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKL 246 (468)
Q Consensus 167 ~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v 246 (468)
+++++.+++.+. +.||.|++.+..|+++.-.. . ... + .. -. .+|+..++++++...... ++
T Consensus 90 s~y~r~L~~~~~---~rg~~~Vv~~~Rgcs~~~n~-~--------p~~-y--h~-G~-t~D~~~~l~~l~~~~~~r--~~ 150 (345)
T COG0429 90 SPYARGLMRALS---RRGWLVVVFHFRGCSGEANT-S--------PRL-Y--HS-GE-TEDIRFFLDWLKARFPPR--PL 150 (345)
T ss_pred CHHHHHHHHHHH---hcCCeEEEEecccccCCccc-C--------cce-e--cc-cc-hhHHHHHHHHHHHhCCCC--ce
Confidence 478888999888 99999999999998762110 0 111 1 11 11 399999999999976665 99
Q ss_pred EEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCC
Q 012210 247 LAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSS 326 (468)
Q Consensus 247 ~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (468)
..||+|+||.+...|..+ ++....+.+.++++.|++.......+. .... ..+...
T Consensus 151 ~avG~SLGgnmLa~ylge---eg~d~~~~aa~~vs~P~Dl~~~~~~l~-------------~~~s--~~ly~r------- 205 (345)
T COG0429 151 YAVGFSLGGNMLANYLGE---EGDDLPLDAAVAVSAPFDLEACAYRLD-------------SGFS--LRLYSR------- 205 (345)
T ss_pred EEEEecccHHHHHHHHHh---hccCcccceeeeeeCHHHHHHHHHHhc-------------Cchh--hhhhHH-------
Confidence 999999999766666665 344667888888888877633211110 0000 001100
Q ss_pred chhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHH---------HHHHHHHHHhcCcccccCCcccc------ccccC
Q 012210 327 PPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAK---------LILQLTTAFREGGLRDRGGKFFY------KDHIH 391 (468)
Q Consensus 327 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~------~~~l~ 391 (468)
++...+...... .+..+ ....+.. .+.++...+. ..+.++.+..+| ...+.
T Consensus 206 --~l~~~L~~~~~~-------kl~~l----~~~~p~~~~~~ik~~~ti~eFD~~~T-ap~~Gf~da~dYYr~aSs~~~L~ 271 (345)
T COG0429 206 --YLLRNLKRNAAR-------KLKEL----EPSLPGTVLAAIKRCRTIREFDDLLT-APLHGFADAEDYYRQASSLPLLP 271 (345)
T ss_pred --HHHHHHHHHHHH-------HHHhc----CcccCcHHHHHHHhhchHHhccceee-ecccCCCcHHHHHHhcccccccc
Confidence 011111111110 00000 0001111 0111111110 111112222222 23789
Q ss_pred ccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchh--hHHHHHHHHHhhccC
Q 012210 392 KCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVE--QVYPCIVQFLGRYDS 466 (468)
Q Consensus 392 ~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe--~v~~~I~~FL~~~~~ 466 (468)
+|.+|+|||++.+|++++++...+.....+ ..+.+.+- .|-+|++|+.++.... +..+.|.+|++...+
T Consensus 272 ~Ir~PtLii~A~DDP~~~~~~iP~~~~~~n-p~v~l~~t-----~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~~ 342 (345)
T COG0429 272 KIRKPTLIINAKDDPFMPPEVIPKLQEMLN-PNVLLQLT-----EHGGHVGFLGGKLLHPQMWLEQRILDWLDPFLE 342 (345)
T ss_pred ccccceEEEecCCCCCCChhhCCcchhcCC-CceEEEee-----cCCceEEeccCccccchhhHHHHHHHHHHHHHh
Confidence 999999999999999999988777766433 24577665 5556666555443223 778899999987654
|
|
| >COG4757 Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.32 E-value=8.3e-12 Score=113.97 Aligned_cols=252 Identities=15% Similarity=0.182 Sum_probs=159.0
Q ss_pred hhccccccccccccccc-cchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHH
Q 012210 151 RGKLSSLLERRQSSAIA-IQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVP 229 (468)
Q Consensus 151 ~~~~~~ll~~~~~~G~~-~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~ 229 (468)
.++.++.+......|+. ...+.+|..++ ..||.|+..|+.|.++. ... ......|++.+++..|+.
T Consensus 26 ~~~~~g~~~va~a~Gv~~~fYRrfA~~a~---~~Gf~Vlt~dyRG~g~S---~p~-------~~~~~~~~~~DwA~~D~~ 92 (281)
T COG4757 26 DGKASGRLVVAGATGVGQYFYRRFAAAAA---KAGFEVLTFDYRGIGQS---RPA-------SLSGSQWRYLDWARLDFP 92 (281)
T ss_pred CCCCCCcEEecccCCcchhHhHHHHHHhh---ccCceEEEEecccccCC---Ccc-------ccccCccchhhhhhcchH
Confidence 34456666666677776 44578899898 99999999888887652 111 111234577888889999
Q ss_pred HHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCC
Q 012210 230 AAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVP 309 (468)
Q Consensus 230 a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (468)
++++.++...+.. +...|||||||.+.-.+..+ + ++.+....+........-.....+.. ....+.
T Consensus 93 aal~~~~~~~~~~--P~y~vgHS~GGqa~gL~~~~------~-k~~a~~vfG~gagwsg~m~~~~~l~~----~~l~~l- 158 (281)
T COG4757 93 AALAALKKALPGH--PLYFVGHSFGGQALGLLGQH------P-KYAAFAVFGSGAGWSGWMGLRERLGA----VLLWNL- 158 (281)
T ss_pred HHHHHHHhhCCCC--ceEEeeccccceeecccccC------c-ccceeeEeccccccccchhhhhcccc----eeeccc-
Confidence 9999999977655 89999999999988777654 3 55555555544332221110000000 000000
Q ss_pred CcchHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCc-ccccc
Q 012210 310 VVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGK-FFYKD 388 (468)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 388 (468)
..+ .+..|.. .+.+-+...-..+|...+++|.++++....-..+.. ..+.+
T Consensus 159 ----------v~p------~lt~w~g------------~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q 210 (281)
T COG4757 159 ----------VGP------PLTFWKG------------YMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQ 210 (281)
T ss_pred ----------ccc------chhhccc------------cCcHhhcCCCccCcchHHHHHHHHhcCccccccChhHhHHHH
Confidence 000 0111111 111112222236788889999998875422111111 12455
Q ss_pred ccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccch-hhHHHHHHHHH
Q 012210 389 HIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAV-EQVYPCIVQFL 461 (468)
Q Consensus 389 ~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~p-e~v~~~I~~FL 461 (468)
....+.+|+..+...+|+.+|+.+...+....+++..+...+. +..+-.+|+.++- ++ |..++.+++|+
T Consensus 211 ~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~nApl~~~~~~-~~~~~lGH~gyfR---~~~Ealwk~~L~w~ 280 (281)
T COG4757 211 VYAAVRTPITFSRALDDPWAPPASRDAFASFYRNAPLEMRDLP-RAEGPLGHMGYFR---EPFEALWKEMLGWF 280 (281)
T ss_pred HHHHhcCceeeeccCCCCcCCHHHHHHHHHhhhcCcccceecC-cccCcccchhhhc---cchHHHHHHHHHhh
Confidence 6788999999999999999999999999999999977666652 2224566666542 43 88999999887
|
|
| >KOG1838 consensus Alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.32 E-value=4.6e-11 Score=119.35 Aligned_cols=101 Identities=23% Similarity=0.292 Sum_probs=76.4
Q ss_pred cccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCC
Q 012210 164 SAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKD 243 (468)
Q Consensus 164 ~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~ 243 (468)
+.-..+|+.++..+. +.||+|+....+|.++.--.+ ... + +. .. .+|+.+++++++.+++..
T Consensus 137 ~S~~~YVr~lv~~a~---~~G~r~VVfN~RG~~g~~LtT------pr~----f--~a-g~-t~Dl~~~v~~i~~~~P~a- 198 (409)
T KOG1838|consen 137 GSHESYVRHLVHEAQ---RKGYRVVVFNHRGLGGSKLTT------PRL----F--TA-GW-TEDLREVVNHIKKRYPQA- 198 (409)
T ss_pred CChhHHHHHHHHHHH---hCCcEEEEECCCCCCCCccCC------Cce----e--ec-CC-HHHHHHHHHHHHHhCCCC-
Confidence 344588999999998 999999997777754421111 000 1 11 12 399999999999999887
Q ss_pred CcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcccccc
Q 012210 244 GKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 286 (468)
Q Consensus 244 ~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~ 286 (468)
++..+|+||||.+...|+++- +....+.+.+.++.+++.
T Consensus 199 -~l~avG~S~Gg~iL~nYLGE~---g~~~~l~~a~~v~~Pwd~ 237 (409)
T KOG1838|consen 199 -PLFAVGFSMGGNILTNYLGEE---GDNTPLIAAVAVCNPWDL 237 (409)
T ss_pred -ceEEEEecchHHHHHHHhhhc---cCCCCceeEEEEeccchh
Confidence 999999999999999999983 334578888888888874
|
|
| >PRK11071 esterase YqiA; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.4e-10 Score=104.39 Aligned_cols=55 Identities=20% Similarity=0.141 Sum_probs=45.0
Q ss_pred cCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 012210 393 CNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 462 (468)
Q Consensus 393 I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~ 462 (468)
..+|+++++|++|.++|++.+.++++.. ..+++ ++++|..- ..+++.+.|.+|+.
T Consensus 135 ~~~~v~iihg~~De~V~~~~a~~~~~~~-----~~~~~--~ggdH~f~--------~~~~~~~~i~~fl~ 189 (190)
T PRK11071 135 SPDLIWLLQQTGDEVLDYRQAVAYYAAC-----RQTVE--EGGNHAFV--------GFERYFNQIVDFLG 189 (190)
T ss_pred ChhhEEEEEeCCCCcCCHHHHHHHHHhc-----ceEEE--CCCCcchh--------hHHHhHHHHHHHhc
Confidence 6789999999999999999999999953 34455 78888662 33889999999985
|
|
| >PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins | Back alignment and domain information |
|---|
Probab=99.24 E-value=5.1e-11 Score=118.40 Aligned_cols=231 Identities=16% Similarity=0.138 Sum_probs=120.8
Q ss_pred hccccccccccccccccchhhHHH--HHHhhhhcCceEeccCccccccCCccchHH--HhhcccceEeec-----CChhh
Q 012210 152 GKLSSLLERRQSSAIAIQIRDLSQ--NLVNMIEEGQLSVSPQLFDLQERLFSTIDD--FQKQLDLIVQYD-----WDFDH 222 (468)
Q Consensus 152 ~~~~~ll~~~~~~G~~~~i~~~a~--~la~~l~~Gy~viapdl~~~~~~~~~~~~~--l~~~~~~~~~~D-----~~~~~ 222 (468)
++.+.++. +||....-....+ .++ .+||.|+++|..|.++.-...... -...++.....+ +-+..
T Consensus 81 ~~~Pavv~---~hGyg~~~~~~~~~~~~a---~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~ 154 (320)
T PF05448_consen 81 GKLPAVVQ---FHGYGGRSGDPFDLLPWA---AAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRR 154 (320)
T ss_dssp SSEEEEEE---E--TT--GGGHHHHHHHH---HTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHH
T ss_pred CCcCEEEE---ecCCCCCCCCcccccccc---cCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHH
Confidence 34445555 4554443333322 355 899999999999876421110000 000111111011 11223
Q ss_pred HHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCch
Q 012210 223 YLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADP 302 (468)
Q Consensus 223 ~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~ 302 (468)
+ ..|...+++++......+..+|++.|.|+||.+++.+|+. .++|++++...|...-...
T Consensus 155 ~-~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaL------d~rv~~~~~~vP~l~d~~~------------- 214 (320)
T PF05448_consen 155 V-YLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAAL------DPRVKAAAADVPFLCDFRR------------- 214 (320)
T ss_dssp H-HHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHH------SST-SEEEEESESSSSHHH-------------
T ss_pred H-HHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHh------CccccEEEecCCCccchhh-------------
Confidence 3 3899999999999887777799999999999999999998 7789999998874431110
Q ss_pred hhhcCCCCcchHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCC
Q 012210 303 AQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGG 382 (468)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (468)
.+......... .-+..++... ... ++ ...+....+ .
T Consensus 215 -------------~~~~~~~~~~y-~~~~~~~~~~-d~~----~~----------------~~~~v~~~L---------~ 250 (320)
T PF05448_consen 215 -------------ALELRADEGPY-PEIRRYFRWR-DPH----HE----------------REPEVFETL---------S 250 (320)
T ss_dssp -------------HHHHT--STTT-HHHHHHHHHH-SCT----HC----------------HHHHHHHHH---------H
T ss_pred -------------hhhcCCccccH-HHHHHHHhcc-CCC----cc----------------cHHHHHHHH---------h
Confidence 00000000000 0001111100 000 00 001111111 1
Q ss_pred ccccccccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 012210 383 KFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 462 (468)
Q Consensus 383 ~~~~~~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~ 462 (468)
.+|...-.++|+||+++-.|-.|.+|||......++.++. .+++.++ |..+|.... +.-.+...+||.
T Consensus 251 Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~-~K~l~vy--p~~~He~~~---------~~~~~~~~~~l~ 318 (320)
T PF05448_consen 251 YFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPG-PKELVVY--PEYGHEYGP---------EFQEDKQLNFLK 318 (320)
T ss_dssp TT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--S-SEEEEEE--TT--SSTTH---------HHHHHHHHHHHH
T ss_pred hhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCC-CeeEEec--cCcCCCchh---------hHHHHHHHHHHh
Confidence 2333456788999999999999999999999999999997 5888888 555554332 333778899988
Q ss_pred hc
Q 012210 463 RY 464 (468)
Q Consensus 463 ~~ 464 (468)
+|
T Consensus 319 ~~ 320 (320)
T PF05448_consen 319 EH 320 (320)
T ss_dssp H-
T ss_pred cC
Confidence 75
|
Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F .... |
| >KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.18 E-value=2e-10 Score=107.50 Aligned_cols=166 Identities=17% Similarity=0.145 Sum_probs=114.0
Q ss_pred CceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHH
Q 012210 184 GQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLS 263 (468)
Q Consensus 184 Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~ 263 (468)
++.+++.|.-|.+.. .|...- ... .+|+.++.++|+...+ +.++++++|+|+|...++.+|+
T Consensus 88 n~nv~~~DYSGyG~S----------~G~psE-----~n~--y~Di~avye~Lr~~~g-~~~~Iil~G~SiGt~~tv~Las 149 (258)
T KOG1552|consen 88 NCNVVSYDYSGYGRS----------SGKPSE-----RNL--YADIKAVYEWLRNRYG-SPERIILYGQSIGTVPTVDLAS 149 (258)
T ss_pred cceEEEEeccccccc----------CCCccc-----ccc--hhhHHHHHHHHHhhcC-CCceEEEEEecCCchhhhhHhh
Confidence 788888787776552 121111 122 3999999999999997 5569999999999999999999
Q ss_pred hcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCchhHHHHHHHhhhcccc
Q 012210 264 RCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDM 343 (468)
Q Consensus 264 ~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 343 (468)
++ | ++++|+.+|..... ..+++....
T Consensus 150 r~-----~--~~alVL~SPf~S~~------------------------------rv~~~~~~~----------------- 175 (258)
T KOG1552|consen 150 RY-----P--LAAVVLHSPFTSGM------------------------------RVAFPDTKT----------------- 175 (258)
T ss_pred cC-----C--cceEEEeccchhhh------------------------------hhhccCcce-----------------
Confidence 85 4 99999988743310 000100000
Q ss_pred CCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCC
Q 012210 344 MHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPED 423 (468)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~ 423 (468)
.+ +. ..+...+..+.|+||+|++||+.|.++|.....++++..++.
T Consensus 176 -------~~---------------~~------------d~f~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~ 221 (258)
T KOG1552|consen 176 -------TY---------------CF------------DAFPNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEK 221 (258)
T ss_pred -------EE---------------ee------------ccccccCcceeccCCEEEEecccCceecccccHHHHHhcccc
Confidence 00 00 001113567889999999999999999999999999999984
Q ss_pred ceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 424 LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 424 ~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
.+-.++ .+++|..-. -..++...+..|+....
T Consensus 222 -~epl~v--~g~gH~~~~-------~~~~yi~~l~~f~~~~~ 253 (258)
T KOG1552|consen 222 -VEPLWV--KGAGHNDIE-------LYPEYIEHLRRFISSVL 253 (258)
T ss_pred -CCCcEE--ecCCCcccc-------cCHHHHHHHHHHHHHhc
Confidence 333333 577776553 33677788888887554
|
|
| >PRK11460 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=4.7e-10 Score=106.83 Aligned_cols=182 Identities=14% Similarity=0.072 Sum_probs=109.7
Q ss_pred ccccccccccccchhhHHHHHHhhhhcC--ceEeccCcccccc-----CCccchHHHhhcccceEeecCChhhHHhhhHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEG--QLSVSPQLFDLQE-----RLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVP 229 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~G--y~viapdl~~~~~-----~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~ 229 (468)
++-.|++.|-...+..++..|+ ..+ +.++.|+-+...+ .|... .+......--+..... +.+.
T Consensus 19 vIlLHG~G~~~~~~~~l~~~l~---~~~~~~~~i~~~g~~~~~~~~g~~W~~~------~~~~~~~~~~~~~~~~-~~l~ 88 (232)
T PRK11460 19 LLLFHGVGDNPVAMGEIGSWFA---PAFPDALVVSVGGPEPSGNGAGRQWFSV------QGITEDNRQARVAAIM-PTFI 88 (232)
T ss_pred EEEEeCCCCChHHHHHHHHHHH---HHCCCCEEECCCCCCCcCCCCCcccccC------CCCCccchHHHHHHHH-HHHH
Confidence 4554555556666778888887 555 4566666432111 11110 0000000000122332 5566
Q ss_pred HHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCC
Q 012210 230 AAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVP 309 (468)
Q Consensus 230 a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (468)
++++++..+.+.+..+++++||||||.+++.++.++ +..+.++|.+++...
T Consensus 89 ~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~-----~~~~~~vv~~sg~~~------------------------ 139 (232)
T PRK11460 89 ETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAE-----PGLAGRVIAFSGRYA------------------------ 139 (232)
T ss_pred HHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhC-----CCcceEEEEeccccc------------------------
Confidence 677777777666556899999999999999998875 555565665543110
Q ss_pred CcchHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccc
Q 012210 310 VVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDH 389 (468)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (468)
..+ .
T Consensus 140 -------------------------------------------------~~~---------------------------~ 143 (232)
T PRK11460 140 -------------------------------------------------SLP---------------------------E 143 (232)
T ss_pred -------------------------------------------------ccc---------------------------c
Confidence 000 0
Q ss_pred cCccCccEEEEecCCCCcCCHHHHHHHHHhCCCC--ceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHH
Q 012210 390 IHKCNIPILAIAGDQDLICPPEAVEETVKLLPED--LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFL 461 (468)
Q Consensus 390 l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~--~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL 461 (468)
....++|+|++||++|.++|.+.++++.+.+... .++++++ ++++|....+ ..+.+.+.+.++|
T Consensus 144 ~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~--~~~gH~i~~~------~~~~~~~~l~~~l 209 (232)
T PRK11460 144 TAPTATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIV--EDLGHAIDPR------LMQFALDRLRYTV 209 (232)
T ss_pred cccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEE--CCCCCCCCHH------HHHHHHHHHHHHc
Confidence 0113689999999999999999999988877643 4466666 8889987754 3344444444444
|
|
| >COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.15 E-value=7.6e-10 Score=108.71 Aligned_cols=256 Identities=18% Similarity=0.153 Sum_probs=144.6
Q ss_pred CceEeccCccccccC--CccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEE-EEEEehhHHHHHH
Q 012210 184 GQLSVSPQLFDLQER--LFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLL-AIGHSMGGILLYA 260 (468)
Q Consensus 184 Gy~viapdl~~~~~~--~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~-lvGhS~GG~ia~~ 260 (468)
-|-|||.+.+|.... .+.... ..|. .|--+|..+..+|+..+-+.|.++++++ ++. +||-||||+.++.
T Consensus 92 r~fvIc~NvlG~c~GStgP~s~~---p~g~---~yg~~FP~~ti~D~V~aq~~ll~~LGI~--~l~avvGgSmGGMqale 163 (368)
T COG2021 92 RFFVICTNVLGGCKGSTGPSSIN---PGGK---PYGSDFPVITIRDMVRAQRLLLDALGIK--KLAAVVGGSMGGMQALE 163 (368)
T ss_pred ceEEEEecCCCCCCCCCCCCCcC---CCCC---ccccCCCcccHHHHHHHHHHHHHhcCcc--eEeeeeccChHHHHHHH
Confidence 389999999987532 111111 1111 1222455555688888888888998987 776 9999999999999
Q ss_pred HHHhcCCCCCcccccceeEEccccccCCchhhHHhhccc---CchhhhcC-----C---CCcchHhHHHHhcCCCCCchh
Q 012210 261 MLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPL---ADPAQALN-----V---PVVPLGALLTAAYPLSSSPPY 329 (468)
Q Consensus 261 ~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~---~~~~~~~~-----~---~~~~~~~~~~~~~~~~~~~~~ 329 (468)
++..| |++|+++|.++++.........+...... .+|...-+ . ......+++..+.-+. ...+
T Consensus 164 Wa~~y-----Pd~V~~~i~ia~~~r~s~~~ia~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS-~~~~ 237 (368)
T COG2021 164 WAIRY-----PDRVRRAIPIATAARLSAQNIAFNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRS-EEEL 237 (368)
T ss_pred HHHhC-----hHHHhhhheecccccCCHHHHHHHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccC-HHHH
Confidence 99999 99999999999977766544333322111 11111000 0 0111111111111110 0000
Q ss_pred HHHHHHHhhhccccC--CHHHHHHHHh----hccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecC
Q 012210 330 VFSWLNNLISAEDMM--HPELLKKLVL----NNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGD 403 (468)
Q Consensus 330 ~~~~l~~~~~~~~~~--~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~ 403 (468)
-.++-......+... ....++.++. ..........+..+.+.+...++.. +.-++...+++|++|+|++.-+
T Consensus 238 ~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~~rfDaNsYL~lt~ald~~D~s~--~~~~l~~al~~i~~~~lv~gi~ 315 (368)
T COG2021 238 DERFGRRLQADPLRGGGVRFAVESYLDYQGDKFVARFDANSYLYLTRALDYHDVSR--GRGDLTAALARIKAPVLVVGIT 315 (368)
T ss_pred HHHhcccccccccCCCchhHHHHHHHHHHHHHHHhccCcchHHHHHHHHHhcCCCC--CcCcHHHHHhcCccCEEEEEec
Confidence 000100000000000 0122222221 1223344445555555544322211 1112344589999999999999
Q ss_pred CCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 404 QDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 404 ~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
.|.+.|++..+++.+.++.+.. ++++. ...||-.++- +.+.+.+.|..||+.
T Consensus 316 sD~lfp~~~~~~~~~~L~~~~~-~~~i~-S~~GHDaFL~------e~~~~~~~i~~fL~~ 367 (368)
T COG2021 316 SDWLFPPELQRALAEALPAAGA-LREID-SPYGHDAFLV------ESEAVGPLIRKFLAL 367 (368)
T ss_pred ccccCCHHHHHHHHHhccccCc-eEEec-CCCCchhhhc------chhhhhHHHHHHhhc
Confidence 9999999999999999998743 66662 2235655553 667788999999874
|
|
| >PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.6e-10 Score=107.03 Aligned_cols=57 Identities=23% Similarity=0.329 Sum_probs=45.8
Q ss_pred hhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCC
Q 012210 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTS 288 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~ 288 (468)
+-+..++++|+.+..++.++|+|+|.|.||-+|+.+|+.+ + .|+++|.++|+.....
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~-----~-~i~avVa~~ps~~~~~ 60 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRF-----P-QISAVVAISPSSVVFQ 60 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHS-----S-SEEEEEEES--SB--S
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcC-----C-CccEEEEeCCceeEec
Confidence 5678999999999888778999999999999999999995 4 8999999988766544
|
Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B. |
| >COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.09 E-value=2.7e-09 Score=99.39 Aligned_cols=226 Identities=19% Similarity=0.233 Sum_probs=131.5
Q ss_pred cccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHH
Q 012210 156 SLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYI 235 (468)
Q Consensus 156 ~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l 235 (468)
.|+.-|-..|-....+.+.++|. .-..+++..+.|++.+.. .. ...|+.++.+.|
T Consensus 9 ~L~cfP~AGGsa~~fr~W~~~lp----~~iel~avqlPGR~~r~~----------ep-----------~~~di~~Lad~l 63 (244)
T COG3208 9 RLFCFPHAGGSASLFRSWSRRLP----ADIELLAVQLPGRGDRFG----------EP-----------LLTDIESLADEL 63 (244)
T ss_pred eEEEecCCCCCHHHHHHHHhhCC----chhheeeecCCCcccccC----------Cc-----------ccccHHHHHHHH
Confidence 56666778888888888888776 346778888888765211 10 114444444444
Q ss_pred HhhcC--CCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcch
Q 012210 236 RAQSK--PKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPL 313 (468)
Q Consensus 236 ~~~~~--~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (468)
..... ..+.++.++||||||++|+..|.++...+.+ ..++.+.+...+.......+. ....
T Consensus 64 a~el~~~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~--p~~lfisg~~aP~~~~~~~i~---------------~~~D 126 (244)
T COG3208 64 ANELLPPLLDAPFALFGHSMGAMLAFEVARRLERAGLP--PRALFISGCRAPHYDRGKQIH---------------HLDD 126 (244)
T ss_pred HHHhccccCCCCeeecccchhHHHHHHHHHHHHHcCCC--cceEEEecCCCCCCcccCCcc---------------CCCH
Confidence 43332 2234899999999999999999987433323 566666665444211110000 0111
Q ss_pred HhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCcc
Q 012210 314 GALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKC 393 (468)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I 393 (468)
..++..+..+...++.+ ..+++.+.-+ .-.++. +++.. +.+.+... ..+
T Consensus 127 ~~~l~~l~~lgG~p~e~------------led~El~~l~----------------LPilRA-D~~~~-e~Y~~~~~-~pl 175 (244)
T COG3208 127 ADFLADLVDLGGTPPEL------------LEDPELMALF----------------LPILRA-DFRAL-ESYRYPPP-APL 175 (244)
T ss_pred HHHHHHHHHhCCCChHH------------hcCHHHHHHH----------------HHHHHH-HHHHh-cccccCCC-CCc
Confidence 12222111111110000 0122222211 111110 00000 11122222 578
Q ss_pred CccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 394 NIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 394 ~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
.||+.++.|++|..+..+....+.+..++ ..++++| +++|+-..+ +.++|...|.+.+..+
T Consensus 176 ~~pi~~~~G~~D~~vs~~~~~~W~~~t~~-~f~l~~f---dGgHFfl~~------~~~~v~~~i~~~l~~~ 236 (244)
T COG3208 176 ACPIHAFGGEKDHEVSRDELGAWREHTKG-DFTLRVF---DGGHFFLNQ------QREEVLARLEQHLAHH 236 (244)
T ss_pred CcceEEeccCcchhccHHHHHHHHHhhcC-CceEEEe---cCcceehhh------hHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999886 5688888 678987776 7889999998888643
|
|
| >PLN02442 S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.08 E-value=3.5e-09 Score=103.93 Aligned_cols=101 Identities=16% Similarity=0.244 Sum_probs=61.3
Q ss_pred HHHHhhhhcCceEeccCccccccCCccchHHHhh----cccceE---e-ecCChhhHHhhhHHHHHHHHHhhcCCCCCcE
Q 012210 175 QNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQK----QLDLIV---Q-YDWDFDHYLEEDVPAAMEYIRAQSKPKDGKL 246 (468)
Q Consensus 175 ~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~----~~~~~~---~-~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v 246 (468)
+.++ ..||.|+.||...++.+.......+.. ..+.-. . ..+.+.++..+++...++......+. +++
T Consensus 71 ~~~~---~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~--~~~ 145 (283)
T PLN02442 71 RAAA---ARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDT--SRA 145 (283)
T ss_pred HHHh---hcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCC--Cce
Confidence 4445 679999999987654211111110000 000000 0 01123344446666666655433333 489
Q ss_pred EEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccc
Q 012210 247 LAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 247 ~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
+++||||||.+++.++.++ |+.+++++.+++..+
T Consensus 146 ~i~G~S~GG~~a~~~a~~~-----p~~~~~~~~~~~~~~ 179 (283)
T PLN02442 146 SIFGHSMGGHGALTIYLKN-----PDKYKSVSAFAPIAN 179 (283)
T ss_pred EEEEEChhHHHHHHHHHhC-----chhEEEEEEECCccC
Confidence 9999999999999999997 889999999887654
|
|
| >KOG4667 consensus Predicted esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.8e-09 Score=97.78 Aligned_cols=206 Identities=16% Similarity=0.229 Sum_probs=120.8
Q ss_pred ccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCC
Q 012210 165 AIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDG 244 (468)
Q Consensus 165 G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~ 244 (468)
--+..+.-+|.+++ +.|+-++..|+.|.+..- + .++|..-.+..+|+..+++++......
T Consensus 46 Kn~~~~~~vA~~~e---~~gis~fRfDF~GnGeS~----------g----sf~~Gn~~~eadDL~sV~q~~s~~nr~--- 105 (269)
T KOG4667|consen 46 KNAIIMKNVAKALE---KEGISAFRFDFSGNGESE----------G----SFYYGNYNTEADDLHSVIQYFSNSNRV--- 105 (269)
T ss_pred cchHHHHHHHHHHH---hcCceEEEEEecCCCCcC----------C----ccccCcccchHHHHHHHHHHhccCceE---
Confidence 33566788999999 999999998888876521 1 122222122239999999999874221
Q ss_pred cEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCC
Q 012210 245 KLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLS 324 (468)
Q Consensus 245 ~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (468)
--+++|||-||-+++.+|.+| . .++.+|-+++..+....-. ..+.
T Consensus 106 v~vi~gHSkGg~Vvl~ya~K~-----~-d~~~viNcsGRydl~~~I~--eRlg--------------------------- 150 (269)
T KOG4667|consen 106 VPVILGHSKGGDVVLLYASKY-----H-DIRNVINCSGRYDLKNGIN--ERLG--------------------------- 150 (269)
T ss_pred EEEEEeecCccHHHHHHHHhh-----c-CchheEEcccccchhcchh--hhhc---------------------------
Confidence 347899999999999999996 3 3777777766554322110 0000
Q ss_pred CCchhHHHHHHH--hhhccccCCHHHHHHHHhhccCC-CcHHHHHHHHHHHhcCcccccCCccccccccC--ccCccEEE
Q 012210 325 SSPPYVFSWLNN--LISAEDMMHPELLKKLVLNNFCT-IPAKLILQLTTAFREGGLRDRGGKFFYKDHIH--KCNIPILA 399 (468)
Q Consensus 325 ~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~I~vPvLi 399 (468)
+. ...|+.. +........ ..... ++......+... ..+... ..+||||-
T Consensus 151 --~~-~l~~ike~Gfid~~~rkG---------~y~~rvt~eSlmdrLntd--------------~h~aclkId~~C~VLT 204 (269)
T KOG4667|consen 151 --ED-YLERIKEQGFIDVGPRKG---------KYGYRVTEESLMDRLNTD--------------IHEACLKIDKQCRVLT 204 (269)
T ss_pred --cc-HHHHHHhCCceecCcccC---------CcCceecHHHHHHHHhch--------------hhhhhcCcCccCceEE
Confidence 00 0011110 000000000 00000 000111111111 111122 24799999
Q ss_pred EecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 012210 400 IAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 462 (468)
Q Consensus 400 I~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~ 462 (468)
+||..|.++|.+.+.++++.+|+. +++++ |++.|.-.. ...+.....+.|..
T Consensus 205 vhGs~D~IVPve~AkefAk~i~nH--~L~iI--EgADHnyt~-------~q~~l~~lgl~f~k 256 (269)
T KOG4667|consen 205 VHGSEDEIVPVEDAKEFAKIIPNH--KLEII--EGADHNYTG-------HQSQLVSLGLEFIK 256 (269)
T ss_pred EeccCCceeechhHHHHHHhccCC--ceEEe--cCCCcCccc-------hhhhHhhhcceeEE
Confidence 999999999999999999999996 88888 899885443 22555555555554
|
|
| >TIGR02821 fghA_ester_D S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.1e-08 Score=100.06 Aligned_cols=52 Identities=23% Similarity=0.325 Sum_probs=39.4
Q ss_pred hhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccc
Q 012210 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
+++..+++ ...+.+.++++++||||||.+++.++.++ |+.+++++++++...
T Consensus 123 ~~l~~~~~---~~~~~~~~~~~~~G~S~GG~~a~~~a~~~-----p~~~~~~~~~~~~~~ 174 (275)
T TIGR02821 123 QELPALVA---AQFPLDGERQGITGHSMGGHGALVIALKN-----PDRFKSVSAFAPIVA 174 (275)
T ss_pred HHHHHHHH---hhCCCCCCceEEEEEChhHHHHHHHHHhC-----cccceEEEEECCccC
Confidence 44444443 33334445899999999999999999987 889999999887644
|
This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. |
| >COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.03 E-value=3.2e-09 Score=94.83 Aligned_cols=159 Identities=19% Similarity=0.299 Sum_probs=118.0
Q ss_pred ccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcE
Q 012210 167 AIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKL 246 (468)
Q Consensus 167 ~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v 246 (468)
|.-+..+++.|. +.||.++.+++.+-++. ...+|....|. +|..++++|++.+.+.. +.
T Consensus 46 nkvv~~la~~l~---~~G~atlRfNfRgVG~S--------------~G~fD~GiGE~--~Da~aaldW~~~~hp~s--~~ 104 (210)
T COG2945 46 NKVVQTLARALV---KRGFATLRFNFRGVGRS--------------QGEFDNGIGEL--EDAAAALDWLQARHPDS--AS 104 (210)
T ss_pred CHHHHHHHHHHH---hCCceEEeecccccccc--------------cCcccCCcchH--HHHHHHHHHHHhhCCCc--hh
Confidence 344567777788 99999999999886552 12356666675 99999999999986654 44
Q ss_pred -EEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCC
Q 012210 247 -LAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSS 325 (468)
Q Consensus 247 -~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (468)
.+.|+|+|++|++.+|.+ .+.....+.+.|+....
T Consensus 105 ~~l~GfSFGa~Ia~~la~r------~~e~~~~is~~p~~~~~-------------------------------------- 140 (210)
T COG2945 105 CWLAGFSFGAYIAMQLAMR------RPEILVFISILPPINAY-------------------------------------- 140 (210)
T ss_pred hhhcccchHHHHHHHHHHh------cccccceeeccCCCCch--------------------------------------
Confidence 689999999999999988 34455555544432200
Q ss_pred CchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecCCC
Q 012210 326 SPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQD 405 (468)
Q Consensus 326 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~D 405 (468)
+ ...+.-..+|.++|+|+.|
T Consensus 141 -------------------d-----------------------------------------fs~l~P~P~~~lvi~g~~D 160 (210)
T COG2945 141 -------------------D-----------------------------------------FSFLAPCPSPGLVIQGDAD 160 (210)
T ss_pred -------------------h-----------------------------------------hhhccCCCCCceeEecChh
Confidence 0 0112335689999999999
Q ss_pred CcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 012210 406 LICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 462 (468)
Q Consensus 406 ~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~ 462 (468)
.++++....++++.++- +++++ +++.|+.|. .-..+.+.|.+|+.
T Consensus 161 dvv~l~~~l~~~~~~~~---~~i~i--~~a~HFF~g-------Kl~~l~~~i~~~l~ 205 (210)
T COG2945 161 DVVDLVAVLKWQESIKI---TVITI--PGADHFFHG-------KLIELRDTIADFLE 205 (210)
T ss_pred hhhcHHHHHHhhcCCCC---ceEEe--cCCCceecc-------cHHHHHHHHHHHhh
Confidence 99999999998888553 55666 899999996 55888999999995
|
|
| >TIGR01840 esterase_phb esterase, PHB depolymerase family | Back alignment and domain information |
|---|
Probab=99.02 E-value=3e-09 Score=99.79 Aligned_cols=90 Identities=14% Similarity=0.079 Sum_probs=62.3
Q ss_pred hcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHH
Q 012210 182 EEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAM 261 (468)
Q Consensus 182 ~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~ 261 (468)
..||.|++||..++..... ....+...... ...... .|+..+++++..+...+.++++++||||||.+++.+
T Consensus 41 ~~g~~Vv~Pd~~g~~~~~~-~~~~~~~~~~~------~~~~~~-~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~ 112 (212)
T TIGR01840 41 RYGFVLVAPEQTSYNSSNN-CWDWFFTHHRA------RGTGEV-ESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVL 112 (212)
T ss_pred hCCeEEEecCCcCccccCC-CCCCCCccccC------CCCccH-HHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHH
Confidence 5799999999988643110 00000000000 011122 778889999988877666799999999999999999
Q ss_pred HHhcCCCCCcccccceeEEcccc
Q 012210 262 LSRCGFEGRESRLAAIVTLASSL 284 (468)
Q Consensus 262 a~~~~~~~~p~~V~~lVllap~~ 284 (468)
+..+ |+.+.+++.+++..
T Consensus 113 a~~~-----p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 113 GCTY-----PDVFAGGASNAGLP 130 (212)
T ss_pred HHhC-----chhheEEEeecCCc
Confidence 9987 88899988887654
|
This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. |
| >COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.02 E-value=7.4e-09 Score=96.89 Aligned_cols=67 Identities=25% Similarity=0.507 Sum_probs=55.0
Q ss_pred ccccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 012210 387 KDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 462 (468)
Q Consensus 387 ~~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~ 462 (468)
...+.++++|+++++|.+|.+.|......+.+.+++ ..+++++ ++++|+.|.+ +|+.+.+.+.+|+.
T Consensus 214 ~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~-~~~~~~~--~~~gH~~~~~------~p~~~~~~i~~~~~ 280 (282)
T COG0596 214 RAALARITVPTLIIHGEDDPVVPAELARRLAAALPN-DARLVVI--PGAGHFPHLE------APEAFAAALLAFLE 280 (282)
T ss_pred chhhccCCCCeEEEecCCCCcCCHHHHHHHHhhCCC-CceEEEe--CCCCCcchhh------cHHHHHHHHHHHHh
Confidence 345778899999999999977777767788888886 3377777 8999999998 88899988888554
|
|
| >COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.00 E-value=7.7e-10 Score=103.56 Aligned_cols=220 Identities=17% Similarity=0.164 Sum_probs=133.9
Q ss_pred cccccccchhhHHHH--HHhhhhcCceEeccCccccccCCccchHHHh---hcccceEee-c----CChhhHHhhhHHHH
Q 012210 162 QSSAIAIQIRDLSQN--LVNMIEEGQLSVSPQLFDLQERLFSTIDDFQ---KQLDLIVQY-D----WDFDHYLEEDVPAA 231 (468)
Q Consensus 162 ~~~G~~~~i~~~a~~--la~~l~~Gy~viapdl~~~~~~~~~~~~~l~---~~~~~~~~~-D----~~~~~~~~~D~~a~ 231 (468)
.+||.+..-.+..+. ++ .+||.|+++|..|.+..|..+...-. ..|+.+... | |=+.... .|+..+
T Consensus 88 ~fhGY~g~~g~~~~~l~wa---~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~-~D~~~a 163 (321)
T COG3458 88 QFHGYGGRGGEWHDMLHWA---VAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVF-LDAVRA 163 (321)
T ss_pred EEeeccCCCCCcccccccc---ccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeeh-HHHHHH
Confidence 377777655444432 45 79999999999998877653322111 123332211 1 1122333 788899
Q ss_pred HHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCc
Q 012210 232 MEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVV 311 (468)
Q Consensus 232 i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (468)
++.+......+.++|.+.|.|+||.|++..++. .+++++++..-|.....+.. +
T Consensus 164 ve~~~sl~~vde~Ri~v~G~SqGGglalaaaal------~~rik~~~~~~Pfl~df~r~--i------------------ 217 (321)
T COG3458 164 VEILASLDEVDEERIGVTGGSQGGGLALAAAAL------DPRIKAVVADYPFLSDFPRA--I------------------ 217 (321)
T ss_pred HHHHhccCccchhheEEeccccCchhhhhhhhc------Chhhhcccccccccccchhh--e------------------
Confidence 999888877777899999999999999999987 88999999987754322110 0
Q ss_pred chHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccC
Q 012210 312 PLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIH 391 (468)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 391 (468)
.+....+ -+.+..++..+-.. ..+.+..+ +.+|......
T Consensus 218 ----------~~~~~~~-----------------ydei~~y~k~h~~~-e~~v~~TL-------------~yfD~~n~A~ 256 (321)
T COG3458 218 ----------ELATEGP-----------------YDEIQTYFKRHDPK-EAEVFETL-------------SYFDIVNLAA 256 (321)
T ss_pred ----------eecccCc-----------------HHHHHHHHHhcCch-HHHHHHHH-------------hhhhhhhHHH
Confidence 0000000 11111111111000 01111111 1233445578
Q ss_pred ccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 392 KCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 392 ~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
+|++|+|+..|--|.+|||...-.+++.++. .+++.++ | -+.|.+ -|.-..+.+..|+...
T Consensus 257 RiK~pvL~svgL~D~vcpPstqFA~yN~l~~-~K~i~iy--~---~~aHe~------~p~~~~~~~~~~l~~l 317 (321)
T COG3458 257 RIKVPVLMSVGLMDPVCPPSTQFAAYNALTT-SKTIEIY--P---YFAHEG------GPGFQSRQQVHFLKIL 317 (321)
T ss_pred hhccceEEeecccCCCCCChhhHHHhhcccC-CceEEEe--e---cccccc------CcchhHHHHHHHHHhh
Confidence 8999999999999999999999999999997 5677776 3 344544 2233445566666543
|
|
| >PLN00021 chlorophyllase | Back alignment and domain information |
|---|
Probab=99.00 E-value=8.3e-09 Score=102.42 Aligned_cols=106 Identities=23% Similarity=0.299 Sum_probs=69.5
Q ss_pred ccccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHH
Q 012210 155 SSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEY 234 (468)
Q Consensus 155 ~~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~ 234 (468)
+.++-.|.+.+.+..+..++++|+ .+||.|++||+++.... .. ..+ . +|..+++++
T Consensus 53 PvVv~lHG~~~~~~~y~~l~~~La---s~G~~VvapD~~g~~~~--~~-----------------~~~-i-~d~~~~~~~ 108 (313)
T PLN00021 53 PVLLFLHGYLLYNSFYSQLLQHIA---SHGFIVVAPQLYTLAGP--DG-----------------TDE-I-KDAAAVINW 108 (313)
T ss_pred CEEEEECCCCCCcccHHHHHHHHH---hCCCEEEEecCCCcCCC--Cc-----------------hhh-H-HHHHHHHHH
Confidence 445665666666777888999999 99999999999875321 00 001 1 334444444
Q ss_pred HHhh--------cCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcccc
Q 012210 235 IRAQ--------SKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSL 284 (468)
Q Consensus 235 l~~~--------~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~ 284 (468)
+... ...+.++++++||||||.+++.+|..++....+.+++++|+++|..
T Consensus 109 l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 109 LSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred HHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 4432 1122358999999999999999998862221224688888887743
|
|
| >PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function | Back alignment and domain information |
|---|
Probab=98.99 E-value=2e-09 Score=104.23 Aligned_cols=102 Identities=21% Similarity=0.218 Sum_probs=66.3
Q ss_pred ccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCC--CCC
Q 012210 167 AIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKP--KDG 244 (468)
Q Consensus 167 ~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~--~~~ 244 (468)
.+++..+++.|. ..||.++-+-+-.....|.. . +.+.=+ +|+.++|+||+...+. ..+
T Consensus 49 vpY~~~La~aL~---~~~wsl~q~~LsSSy~G~G~------------~----SL~~D~-~eI~~~v~ylr~~~~g~~~~~ 108 (303)
T PF08538_consen 49 VPYLPDLAEALE---ETGWSLFQVQLSSSYSGWGT------------S----SLDRDV-EEIAQLVEYLRSEKGGHFGRE 108 (303)
T ss_dssp STCHHHHHHHHT----TT-EEEEE--GGGBTTS-S------------------HHHHH-HHHHHHHHHHHHHS------S
T ss_pred CchHHHHHHHhc---cCCeEEEEEEecCccCCcCc------------c----hhhhHH-HHHHHHHHHHHHhhccccCCc
Confidence 478899999997 78999998777664332221 1 233334 9999999999988421 235
Q ss_pred cEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCC
Q 012210 245 KLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTS 288 (468)
Q Consensus 245 ~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~ 288 (468)
+|+|+|||.|+.-++.|+.........+.|.++|+-+|..+...
T Consensus 109 kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa 152 (303)
T PF08538_consen 109 KIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREA 152 (303)
T ss_dssp -EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTS
T ss_pred cEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhH
Confidence 99999999999999999998532222478999999999877544
|
This family contains many hypothetical proteins. ; PDB: 2Q0X_B. |
| >KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.2e-09 Score=98.95 Aligned_cols=204 Identities=18% Similarity=0.303 Sum_probs=132.6
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
||--+.|-|-..|.-..++-+- ..-+-.|+..+..|.+..- |.. +-+.+ .-|-.++++|+.
T Consensus 81 lLyfh~NAGNmGhr~~i~~~fy--~~l~mnv~ivsYRGYG~S~----------Gsp------sE~GL-~lDs~avldyl~ 141 (300)
T KOG4391|consen 81 LLYFHANAGNMGHRLPIARVFY--VNLKMNVLIVSYRGYGKSE----------GSP------SEEGL-KLDSEAVLDYLM 141 (300)
T ss_pred EEEEccCCCcccchhhHHHHHH--HHcCceEEEEEeeccccCC----------CCc------cccce-eccHHHHHHHHh
Confidence 4544445555444444444332 1346777777777765421 110 11122 378899999999
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhH
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAL 316 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
.+..++..|++++|.|.||.+|..+|+.+ .+++.++++-++........
T Consensus 142 t~~~~dktkivlfGrSlGGAvai~lask~-----~~ri~~~ivENTF~SIp~~~-------------------------- 190 (300)
T KOG4391|consen 142 TRPDLDKTKIVLFGRSLGGAVAIHLASKN-----SDRISAIIVENTFLSIPHMA-------------------------- 190 (300)
T ss_pred cCccCCcceEEEEecccCCeeEEEeeccc-----hhheeeeeeechhccchhhh--------------------------
Confidence 99988888999999999999999999986 77899998876644321110
Q ss_pred HHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCcc
Q 012210 317 LTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIP 396 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP 396 (468)
....+|.. ...+..+ +. . +.+.-...+.+.++|
T Consensus 191 i~~v~p~~------~k~i~~l-----------c~----k--------------------------n~~~S~~ki~~~~~P 223 (300)
T KOG4391|consen 191 IPLVFPFP------MKYIPLL-----------CY----K--------------------------NKWLSYRKIGQCRMP 223 (300)
T ss_pred hheeccch------hhHHHHH-----------HH----H--------------------------hhhcchhhhccccCc
Confidence 00000000 0000000 00 0 000011234567899
Q ss_pred EEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccC
Q 012210 397 ILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 466 (468)
Q Consensus 397 vLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~ 466 (468)
+|+|.|..|.++||...+.+++.+|...+++..| |++.|..-. ..+-.++.|.+||.+...
T Consensus 224 ~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eF--P~gtHNDT~-------i~dGYfq~i~dFlaE~~~ 284 (300)
T KOG4391|consen 224 FLFISGLKDELVPPVMMRQLYELCPSRTKRLAEF--PDGTHNDTW-------ICDGYFQAIEDFLAEVVK 284 (300)
T ss_pred eEEeecCccccCCcHHHHHHHHhCchhhhhheeC--CCCccCceE-------EeccHHHHHHHHHHHhcc
Confidence 9999999999999999999999999988899988 777776554 457789999999987643
|
|
| >PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.9e-07 Score=95.18 Aligned_cols=180 Identities=16% Similarity=0.176 Sum_probs=100.2
Q ss_pred hhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCC---chhhHHhhcccCch
Q 012210 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTS---SKSTLKLLLPLADP 302 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~---~~~~~~~~~~~~~~ 302 (468)
.-..++++.+....+.. +|+++||.|+||+.++++|+.+ |+.+.-+|+-++|+++.. ...+++....+...
T Consensus 123 ~ae~~Fv~~V~~~hp~~-~kp~liGnCQgGWa~~mlAA~~-----Pd~~gplvlaGaPlsywaG~~g~nPmRy~ggl~gg 196 (581)
T PF11339_consen 123 RAEAAFVEEVAERHPDA-PKPNLIGNCQGGWAAMMLAALR-----PDLVGPLVLAGAPLSYWAGERGDNPMRYMGGLLGG 196 (581)
T ss_pred HHHHHHHHHHHHhCCCC-CCceEEeccHHHHHHHHHHhcC-----cCccCceeecCCCcccccCCCCCCcHHHhcCCCcc
Confidence 44455666666554433 3899999999999999999997 888888888888998876 33333333322211
Q ss_pred h------hhcCCCCcchHhHHHHhcCCCCCchhHHHHHHHhhhccccC-CHHHHHHHHhhccCCCcHHHHHHHHHHHh-c
Q 012210 303 A------QALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMM-HPELLKKLVLNNFCTIPAKLILQLTTAFR-E 374 (468)
Q Consensus 303 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 374 (468)
. .-++...+.-..+...+-.+.+...++..++..+....... .-..+++. ...+...+...+.+....+. .
T Consensus 197 sw~~~l~sDlG~G~fdGa~lv~nFe~lnPa~~~w~K~y~Ly~~iD~e~~Rfl~FErW-wgg~~~l~~~ei~~Iv~nLFvg 275 (581)
T PF11339_consen 197 SWLTALVSDLGNGRFDGAWLVQNFENLNPANTYWSKYYDLYANIDTERERFLEFERW-WGGFYDLNGEEILWIVENLFVG 275 (581)
T ss_pred hHHHHHHHHcCCCccCcHHHHhhhhccChhHHHHHHHHHHHhccCCchhhhhHHHHH-hCCccCCCHHHHHHHHHHHhcc
Confidence 1 01111112212222222223333333333333222211100 01112222 23345666777777665543 2
Q ss_pred CcccccCCcc----ccccccCccCccEEEEecCCCCcCCHHHHH
Q 012210 375 GGLRDRGGKF----FYKDHIHKCNIPILAIAGDQDLICPPEAVE 414 (468)
Q Consensus 375 ~~~~~~~~~~----~~~~~l~~I~vPvLiI~G~~D~ivp~~~~~ 414 (468)
+.+.. +.+ ...-+|++|+||+.++.|..|.|+||+++-
T Consensus 276 NrL~~--g~~~~~~G~~~DLr~Ir~Piivfas~gDnITPP~QaL 317 (581)
T PF11339_consen 276 NRLAK--GEFRVSDGRRVDLRNIRSPIIVFASYGDNITPPQQAL 317 (581)
T ss_pred chhcc--CceeccCCcEeehhhCCCCEEEEeccCCCCCChhHhc
Confidence 22221 111 124589999999999999999999999874
|
Their function is unknown. |
| >PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases | Back alignment and domain information |
|---|
Probab=98.87 E-value=2.2e-08 Score=94.20 Aligned_cols=126 Identities=24% Similarity=0.324 Sum_probs=82.3
Q ss_pred hhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhh
Q 012210 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQA 305 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~ 305 (468)
+-+.++|+.... .+.+..+++++|+|+||++++.++.++ |..+.++|.+++........
T Consensus 88 ~~l~~li~~~~~-~~i~~~ri~l~GFSQGa~~al~~~l~~-----p~~~~gvv~lsG~~~~~~~~--------------- 146 (216)
T PF02230_consen 88 ERLDELIDEEVA-YGIDPSRIFLGGFSQGAAMALYLALRY-----PEPLAGVVALSGYLPPESEL--------------- 146 (216)
T ss_dssp HHHHHHHHHHHH-TT--GGGEEEEEETHHHHHHHHHHHCT-----SSTSSEEEEES---TTGCCC---------------
T ss_pred HHHHHHHHHHHH-cCCChhheehhhhhhHHHHHHHHHHHc-----CcCcCEEEEeeccccccccc---------------
Confidence 344445554433 234446999999999999999999987 88999999998744321100
Q ss_pred cCCCCcchHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccc
Q 012210 306 LNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFF 385 (468)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (468)
. .
T Consensus 147 ----------------------------------------~------------~-------------------------- 148 (216)
T PF02230_consen 147 ----------------------------------------E------------D-------------------------- 148 (216)
T ss_dssp ----------------------------------------H------------C--------------------------
T ss_pred ----------------------------------------c------------c--------------------------
Confidence 0 0
Q ss_pred cccccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCC--ceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 386 YKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPED--LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 386 ~~~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~--~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
...... ++|++++||.+|.++|.+.++...+.+... +++++.+ ++++|... .+..+.+.+||++
T Consensus 149 ~~~~~~--~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~--~g~gH~i~----------~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 149 RPEALA--KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEY--PGGGHEIS----------PEELRDLREFLEK 214 (216)
T ss_dssp CHCCCC--TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEE--TT-SSS------------HHHHHHHHHHHHH
T ss_pred cccccC--CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEc--CCCCCCCC----------HHHHHHHHHHHhh
Confidence 001111 799999999999999999888888777654 4577777 77777665 4456788999887
Q ss_pred c
Q 012210 464 Y 464 (468)
Q Consensus 464 ~ 464 (468)
+
T Consensus 215 ~ 215 (216)
T PF02230_consen 215 H 215 (216)
T ss_dssp H
T ss_pred h
Confidence 5
|
; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A. |
| >KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.86 E-value=2.4e-08 Score=94.02 Aligned_cols=107 Identities=21% Similarity=0.253 Sum_probs=72.3
Q ss_pred hccccccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHH
Q 012210 152 GKLSSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAA 231 (468)
Q Consensus 152 ~~~~~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~ 231 (468)
|.+.-|++..+.+|++ +.-++..|.. ..-.+++|+|+.||+..-....+ |++.+.+. .|+.++
T Consensus 74 gpil~l~HG~G~S~LS--fA~~a~el~s--~~~~r~~a~DlRgHGeTk~~~e~------------dlS~eT~~-KD~~~~ 136 (343)
T KOG2564|consen 74 GPILLLLHGGGSSALS--FAIFASELKS--KIRCRCLALDLRGHGETKVENED------------DLSLETMS-KDFGAV 136 (343)
T ss_pred ccEEEEeecCcccchh--HHHHHHHHHh--hcceeEEEeeccccCccccCChh------------hcCHHHHH-HHHHHH
Confidence 4444455544555554 4455665552 23467799999999874322222 45678887 999999
Q ss_pred HHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcc
Q 012210 232 MEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLAS 282 (468)
Q Consensus 232 i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap 282 (468)
++++-... ..+|++|||||||.|+...|..- . -+.+.+++.++-
T Consensus 137 i~~~fge~---~~~iilVGHSmGGaIav~~a~~k---~-lpsl~Gl~viDV 180 (343)
T KOG2564|consen 137 IKELFGEL---PPQIILVGHSMGGAIAVHTAASK---T-LPSLAGLVVIDV 180 (343)
T ss_pred HHHHhccC---CCceEEEeccccchhhhhhhhhh---h-chhhhceEEEEE
Confidence 98886543 34899999999999998877652 1 344888888753
|
|
| >PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=3.4e-08 Score=108.94 Aligned_cols=91 Identities=18% Similarity=0.186 Sum_probs=66.7
Q ss_pred hHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcC-----------
Q 012210 172 DLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSK----------- 240 (468)
Q Consensus 172 ~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~----------- 240 (468)
.+.+.++ .+||.|+..|..|.++. .|... .+...+ .+|..++|+++..+..
T Consensus 270 ~~~~~~~---~rGYaVV~~D~RGtg~S----------eG~~~---~~~~~E--~~D~~~vIeWl~~~~~~~~d~~~~~~~ 331 (767)
T PRK05371 270 SLNDYFL---PRGFAVVYVSGIGTRGS----------DGCPT---TGDYQE--IESMKAVIDWLNGRATAYTDRTRGKEV 331 (767)
T ss_pred hHHHHHH---hCCeEEEEEcCCCCCCC----------CCcCc---cCCHHH--HHHHHHHHHHHhhCCcccccccccccc
Confidence 3456666 89999999999998663 22211 112333 3899999999985321
Q ss_pred ---CCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccc
Q 012210 241 ---PKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 241 ---~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
-..++|+++|.|+||.+++.+|+.. ++.++++|..++..+
T Consensus 332 kq~WsnGkVGm~G~SY~G~~~~~aAa~~-----pp~LkAIVp~a~is~ 374 (767)
T PRK05371 332 KADWSNGKVAMTGKSYLGTLPNAVATTG-----VEGLETIIPEAAISS 374 (767)
T ss_pred ccCCCCCeeEEEEEcHHHHHHHHHHhhC-----CCcceEEEeeCCCCc
Confidence 1137999999999999999998875 889999999876544
|
|
| >TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.4e-08 Score=98.38 Aligned_cols=91 Identities=15% Similarity=0.193 Sum_probs=71.7
Q ss_pred hhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEE
Q 012210 170 IRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAI 249 (468)
Q Consensus 170 i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lv 249 (468)
++.++++|+ .+||.|+++|++|++..- +.. .+.++..+. +|+.+++++++.. +. .+++++
T Consensus 45 ~~~la~~La---~~Gy~Vl~~Dl~G~G~S~----------g~~---~~~~~~~~~-~Dv~~ai~~L~~~-~~--~~v~Lv 104 (266)
T TIGR03101 45 VALQARAFA---AGGFGVLQIDLYGCGDSA----------GDF---AAARWDVWK-EDVAAAYRWLIEQ-GH--PPVTLW 104 (266)
T ss_pred HHHHHHHHH---HCCCEEEEECCCCCCCCC----------Ccc---ccCCHHHHH-HHHHHHHHHHHhc-CC--CCEEEE
Confidence 345678888 899999999999986521 110 123566776 9999999999865 33 399999
Q ss_pred EEehhHHHHHHHHHhcCCCCCcccccceeEEccccc
Q 012210 250 GHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 250 GhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
||||||.+++.+|.++ ++++.++|+++|...
T Consensus 105 G~SmGG~vAl~~A~~~-----p~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 105 GLRLGALLALDAANPL-----AAKCNRLVLWQPVVS 135 (266)
T ss_pred EECHHHHHHHHHHHhC-----ccccceEEEeccccc
Confidence 9999999999999887 789999999987644
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily. |
| >PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3 | Back alignment and domain information |
|---|
Probab=98.83 E-value=4.4e-07 Score=87.26 Aligned_cols=224 Identities=11% Similarity=0.071 Sum_probs=130.7
Q ss_pred hcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHH
Q 012210 182 EEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAM 261 (468)
Q Consensus 182 ~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~ 261 (468)
.+.|.++-.|..|+.. ..+.+. .++... ++++++ +++..++++++.+ .++.+|--.|+.|..++
T Consensus 53 ~~~f~i~Hi~aPGqe~----ga~~~p-~~y~yP----smd~LA-e~l~~Vl~~f~lk------~vIg~GvGAGAnIL~rf 116 (283)
T PF03096_consen 53 LQNFCIYHIDAPGQEE----GAATLP-EGYQYP----SMDQLA-EMLPEVLDHFGLK------SVIGFGVGAGANILARF 116 (283)
T ss_dssp HTTSEEEEEE-TTTST----T------TT---------HHHHH-CTHHHHHHHHT---------EEEEEETHHHHHHHHH
T ss_pred hhceEEEEEeCCCCCC----Cccccc-cccccc----CHHHHH-HHHHHHHHhCCcc------EEEEEeeccchhhhhhc
Confidence 5789999888888755 222222 222222 567886 8899999988765 89999999999999999
Q ss_pred HHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCchhHHH-HHHHhhhc
Q 012210 262 LSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFS-WLNNLISA 340 (468)
Q Consensus 262 a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~ 340 (468)
|..| |++|.++|++++....... ...+. ..+...........+.+.. .+...++.
T Consensus 117 Al~~-----p~~V~GLiLvn~~~~~~gw---~Ew~~----------------~K~~~~~L~~~gmt~~~~d~Ll~h~Fg~ 172 (283)
T PF03096_consen 117 ALKH-----PERVLGLILVNPTCTAAGW---MEWFY----------------QKLSSWLLYSYGMTSSVKDYLLWHYFGK 172 (283)
T ss_dssp HHHS-----GGGEEEEEEES---S---H---HHHHH----------------HHHH-------CTTS-HHHHHHHHHS-H
T ss_pred cccC-----ccceeEEEEEecCCCCccH---HHHHH----------------HHHhcccccccccccchHHhhhhccccc
Confidence 9998 9999999999885543221 21111 1111111111111111112 22333333
Q ss_pred ccc-CCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecCCCCcCCHHHHHHHHHh
Q 012210 341 EDM-MHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKL 419 (468)
Q Consensus 341 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ 419 (468)
... ...+.++.+............+..+.+.+.. ..++........||+|++.|+..+.. +.+.++..+
T Consensus 173 ~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~--------R~DL~~~~~~~~c~vLlvvG~~Sp~~--~~vv~~ns~ 242 (283)
T PF03096_consen 173 EEEENNSDLVQTYRQHLDERINPKNLALFLNSYNS--------RTDLSIERPSLGCPVLLVVGDNSPHV--DDVVEMNSK 242 (283)
T ss_dssp HHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-------------SECTTCCS-EEEEEETTSTTH--HHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhc--------cccchhhcCCCCCCeEEEEecCCcch--hhHHHHHhh
Confidence 222 2456666555444445666777777776643 22334455667799999999998774 677889999
Q ss_pred CCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 420 LPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 420 ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
+...+.++..+ +++|.....| +|..+.+.+.=||+.
T Consensus 243 Ldp~~ttllkv--~dcGglV~eE------qP~klaea~~lFlQG 278 (283)
T PF03096_consen 243 LDPTKTTLLKV--ADCGGLVLEE------QPGKLAEAFKLFLQG 278 (283)
T ss_dssp S-CCCEEEEEE--TT-TT-HHHH-------HHHHHHHHHHHHHH
T ss_pred cCcccceEEEe--cccCCccccc------CcHHHHHHHHHHHcc
Confidence 87777788777 8888888887 999999999999874
|
Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A. |
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=6.8e-08 Score=105.82 Aligned_cols=114 Identities=11% Similarity=0.055 Sum_probs=78.6
Q ss_pred ccccccccccccc--cchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHH
Q 012210 155 SSLLERRQSSAIA--IQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAM 232 (468)
Q Consensus 155 ~~ll~~~~~~G~~--~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i 232 (468)
+.||..++.-|.. +........|+ ..||.|+.+++.|.++.. +.|.+.+.. .+.... .+|+.+++
T Consensus 446 P~ll~~hGg~~~~~~p~f~~~~~~l~---~rG~~v~~~n~RGs~g~G----~~w~~~g~~----~~k~~~--~~D~~a~~ 512 (686)
T PRK10115 446 PLLVYGYGSYGASIDADFSFSRLSLL---DRGFVYAIVHVRGGGELG----QQWYEDGKF----LKKKNT--FNDYLDAC 512 (686)
T ss_pred CEEEEEECCCCCCCCCCccHHHHHHH---HCCcEEEEEEcCCCCccC----HHHHHhhhh----hcCCCc--HHHHHHHH
Confidence 4455544433333 33444444555 899999999999876632 233222221 112223 38999999
Q ss_pred HHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcccccc
Q 012210 233 EYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 286 (468)
Q Consensus 233 ~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~ 286 (468)
++|..+--.+.+++.+.|.|.||.++..++.++ |+.++++|...|..+.
T Consensus 513 ~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~-----Pdlf~A~v~~vp~~D~ 561 (686)
T PRK10115 513 DALLKLGYGSPSLCYGMGGSAGGMLMGVAINQR-----PELFHGVIAQVPFVDV 561 (686)
T ss_pred HHHHHcCCCChHHeEEEEECHHHHHHHHHHhcC-----hhheeEEEecCCchhH
Confidence 999887555567999999999999999999876 8999999998887663
|
|
| >PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.8e-07 Score=89.52 Aligned_cols=122 Identities=12% Similarity=0.132 Sum_probs=84.5
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|+|=|+..+..++...|-+.+...|.|++....|+........ .. ....-|+.++.+ +-..++++.+.
T Consensus 5 i~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~--~~-----~~~~~~sL~~QI-~hk~~~i~~~~ 76 (266)
T PF10230_consen 5 IVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSK--FS-----PNGRLFSLQDQI-EHKIDFIKELI 76 (266)
T ss_pred EEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCccccc--cc-----CCCCccCHHHHH-HHHHHHHHHHh
Confidence 56778999999999999999987666789999988888755322100 00 001223565554 55555555555
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCC
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTS 288 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~ 288 (468)
........+++++|||.|++|++.++.++. ....+|.+++++.|.+....
T Consensus 77 ~~~~~~~~~liLiGHSIGayi~levl~r~~--~~~~~V~~~~lLfPTi~~ia 126 (266)
T PF10230_consen 77 PQKNKPNVKLILIGHSIGAYIALEVLKRLP--DLKFRVKKVILLFPTIEDIA 126 (266)
T ss_pred hhhcCCCCcEEEEeCcHHHHHHHHHHHhcc--ccCCceeEEEEeCCcccccc
Confidence 533112358999999999999999999861 11268999999999765543
|
|
| >PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate [] | Back alignment and domain information |
|---|
Probab=98.79 E-value=7.9e-08 Score=97.00 Aligned_cols=221 Identities=19% Similarity=0.256 Sum_probs=117.2
Q ss_pred hhcccccccccc----------ccccccchhhHHHHHHh-hhhcCceEeccCccccccCCccchHHHhhcccceEeecCC
Q 012210 151 RGKLSSLLERRQ----------SSAIAIQIRDLSQNLVN-MIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWD 219 (468)
Q Consensus 151 ~~~~~~ll~~~~----------~~G~~~~i~~~a~~la~-~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~ 219 (468)
++.+.++|..|. ..|+-..-.++.+.+.+ +...|+.++..|++|-+..- ......|
T Consensus 174 g~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~-----------~~~l~~D-- 240 (411)
T PF06500_consen 174 GKTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESP-----------KWPLTQD-- 240 (411)
T ss_dssp TCEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGT-----------TT-S-S---
T ss_pred CcEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccc-----------cCCCCcC--
Confidence 466677777664 23444444455444332 23799999999999876520 0001112
Q ss_pred hhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhccc
Q 012210 220 FDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPL 299 (468)
Q Consensus 220 ~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~ 299 (468)
.+ .-..+++++|.....++..+|+++|.||||.+|.++|..+ +++++++|.++++....-...
T Consensus 241 ~~----~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le-----~~RlkavV~~Ga~vh~~ft~~-------- 303 (411)
T PF06500_consen 241 SS----RLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALE-----DPRLKAVVALGAPVHHFFTDP-------- 303 (411)
T ss_dssp CC----HHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHT-----TTT-SEEEEES---SCGGH-H--------
T ss_pred HH----HHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhc-----ccceeeEeeeCchHhhhhccH--------
Confidence 11 2345789999888777667999999999999999999764 789999999998754321110
Q ss_pred CchhhhcCCCCcchHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccc
Q 012210 300 ADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRD 379 (468)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (468)
......|.. ....+...++... .+.+.+ ...+.
T Consensus 304 ---~~~~~~P~m------------------y~d~LA~rlG~~~-~~~~~l-------------------~~el~------ 336 (411)
T PF06500_consen 304 ---EWQQRVPDM------------------YLDVLASRLGMAA-VSDESL-------------------RGELN------ 336 (411)
T ss_dssp ---HHHTTS-HH------------------HHHHHHHHCT-SC-E-HHHH-------------------HHHGG------
T ss_pred ---HHHhcCCHH------------------HHHHHHHHhCCcc-CCHHHH-------------------HHHHH------
Confidence 000000000 0000111000000 011111 11111
Q ss_pred cCCcccccc--cc--CccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHH
Q 012210 380 RGGKFFYKD--HI--HKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYP 455 (468)
Q Consensus 380 ~~~~~~~~~--~l--~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~ 455 (468)
.+.++. -+ ++..+|+|.+.|++|.++|.+..+-+...-.+. +...+ +..+ .|.. -+....
T Consensus 337 ---~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~~g--k~~~~--~~~~--~~~g-------y~~al~ 400 (411)
T PF06500_consen 337 ---KFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAESSTDG--KALRI--PSKP--LHMG-------YPQALD 400 (411)
T ss_dssp ---GGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHTBTT---EEEEE---SSS--HHHH-------HHHHHH
T ss_pred ---hcCcchhccccCCCCCcceEEeecCCCCCCCHHHHHHHHhcCCCC--ceeec--CCCc--cccc-------hHHHHH
Confidence 111111 23 678999999999999999999988888876654 55555 3222 3543 256778
Q ss_pred HHHHHHhhc
Q 012210 456 CIVQFLGRY 464 (468)
Q Consensus 456 ~I~~FL~~~ 464 (468)
.+.+||++.
T Consensus 401 ~~~~Wl~~~ 409 (411)
T PF06500_consen 401 EIYKWLEDK 409 (411)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 899999865
|
This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C. |
| >TIGR00976 /NonD putative hydrolase, CocE/NonD family | Back alignment and domain information |
|---|
Probab=98.76 E-value=9.1e-08 Score=102.71 Aligned_cols=90 Identities=14% Similarity=0.009 Sum_probs=69.4
Q ss_pred HHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEe
Q 012210 173 LSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHS 252 (468)
Q Consensus 173 ~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS 252 (468)
.++.++ .+||.|+++|++|++..- +... .+. .... +|+.++++++..+..++ ++|+++|||
T Consensus 45 ~~~~l~---~~Gy~vv~~D~RG~g~S~----------g~~~---~~~-~~~~-~D~~~~i~~l~~q~~~~-~~v~~~G~S 105 (550)
T TIGR00976 45 EPAWFV---AQGYAVVIQDTRGRGASE----------GEFD---LLG-SDEA-ADGYDLVDWIAKQPWCD-GNVGMLGVS 105 (550)
T ss_pred cHHHHH---hCCcEEEEEeccccccCC----------CceE---ecC-cccc-hHHHHHHHHHHhCCCCC-CcEEEEEeC
Confidence 456677 899999999999987631 1111 111 2344 99999999998875544 699999999
Q ss_pred hhHHHHHHHHHhcCCCCCcccccceeEEcccccc
Q 012210 253 MGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 286 (468)
Q Consensus 253 ~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~ 286 (468)
+||.+++.+|..+ +++++++|..++..+.
T Consensus 106 ~GG~~a~~~a~~~-----~~~l~aiv~~~~~~d~ 134 (550)
T TIGR00976 106 YLAVTQLLAAVLQ-----PPALRAIAPQEGVWDL 134 (550)
T ss_pred hHHHHHHHHhccC-----CCceeEEeecCcccch
Confidence 9999999999886 7899999998876554
|
This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. |
| >PRK10162 acetyl esterase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=4e-07 Score=90.93 Aligned_cols=95 Identities=14% Similarity=0.071 Sum_probs=65.3
Q ss_pred cchhhHHHHHHhhhh-cCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhh---cCCCC
Q 012210 168 IQIRDLSQNLVNMIE-EGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQ---SKPKD 243 (468)
Q Consensus 168 ~~i~~~a~~la~~l~-~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~---~~~~~ 243 (468)
.....+++.|+ . .|+.|+++|...... ..+.... +|+.++++++..+ .+.+.
T Consensus 98 ~~~~~~~~~la---~~~g~~Vv~vdYrlape--------------------~~~p~~~-~D~~~a~~~l~~~~~~~~~d~ 153 (318)
T PRK10162 98 DTHDRIMRLLA---SYSGCTVIGIDYTLSPE--------------------ARFPQAI-EEIVAVCCYFHQHAEDYGINM 153 (318)
T ss_pred hhhhHHHHHHH---HHcCCEEEEecCCCCCC--------------------CCCCCcH-HHHHHHHHHHHHhHHHhCCCh
Confidence 44566778887 5 599999988643211 1222333 8888888888653 34444
Q ss_pred CcEEEEEEehhHHHHHHHHHhcCCCCC-cccccceeEEcccccc
Q 012210 244 GKLLAIGHSMGGILLYAMLSRCGFEGR-ESRLAAIVTLASSLDY 286 (468)
Q Consensus 244 ~~v~lvGhS~GG~ia~~~a~~~~~~~~-p~~V~~lVllap~~~~ 286 (468)
.+++++|+|+||.+++.++.+...... +..+.++|++.|..+.
T Consensus 154 ~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 154 SRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGL 197 (318)
T ss_pred hHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCC
Confidence 699999999999999999876411111 3578899999886654
|
|
| >PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.65 E-value=2e-07 Score=89.40 Aligned_cols=162 Identities=23% Similarity=0.251 Sum_probs=99.0
Q ss_pred hHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCc
Q 012210 222 HYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLAD 301 (468)
Q Consensus 222 ~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~ 301 (468)
..+ .-+..++.+|+.+++++ ++.+|||||||..++.|+..++....-|++.++|+|++|+...........
T Consensus 84 ~qa-~wl~~vl~~L~~~Y~~~--~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~------ 154 (255)
T PF06028_consen 84 KQA-KWLKKVLKYLKKKYHFK--KFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQN------ 154 (255)
T ss_dssp HHH-HHHHHHHHHHHHCC--S--EEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TT------
T ss_pred HHH-HHHHHHHHHHHHhcCCC--EEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccch------
Confidence 444 78899999999999997 999999999999999999998655556789999999998764322100000
Q ss_pred hhhhcCCCCcchHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccC
Q 012210 302 PAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRG 381 (468)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (468)
...+..+. ...-...+..+....+
T Consensus 155 -----------------------------------------------~~~~~~~g-p~~~~~~y~~l~~~~~-------- 178 (255)
T PF06028_consen 155 -----------------------------------------------QNDLNKNG-PKSMTPMYQDLLKNRR-------- 178 (255)
T ss_dssp -----------------------------------------------TT-CSTT--BSS--HHHHHHHHTHG--------
T ss_pred -----------------------------------------------hhhhcccC-CcccCHHHHHHHHHHH--------
Confidence 00000000 0001112222222110
Q ss_pred CccccccccCccCccEEEEecC------CCCcCCHHHHHHHHHhCCCCceeEEE--ecCCCCCCCCcccccccccchhhH
Q 012210 382 GKFFYKDHIHKCNIPILAIAGD------QDLICPPEAVEETVKLLPEDLVTYKV--FGEPSGPHYAHYDLVGGRMAVEQV 453 (468)
Q Consensus 382 ~~~~~~~~l~~I~vPvLiI~G~------~D~ivp~~~~~~l~~~ip~~~~~~~v--~~~~~agH~~H~e~~~~~~~pe~v 453 (468)
.. -.-++.||-|.|. .|.+||..++..+...+.+....+.. +..+++.|..-. +-.+|
T Consensus 179 ------~~-~p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~Lh-------eN~~V 244 (255)
T PF06028_consen 179 ------KN-FPKNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLH-------ENPQV 244 (255)
T ss_dssp ------GG-STTT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGG-------CCHHH
T ss_pred ------hh-CCCCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECCCCccccCC-------CCHHH
Confidence 01 1125889999999 89999999999999999874444543 322334554443 33688
Q ss_pred HHHHHHHHh
Q 012210 454 YPCIVQFLG 462 (468)
Q Consensus 454 ~~~I~~FL~ 462 (468)
.+.|.+||=
T Consensus 245 ~~~I~~FLw 253 (255)
T PF06028_consen 245 DKLIIQFLW 253 (255)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhc
Confidence 899999983
|
; PDB: 3LP5_A 3FLE_A 3DS8_A. |
| >PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=98.61 E-value=1e-06 Score=82.19 Aligned_cols=97 Identities=22% Similarity=0.232 Sum_probs=67.8
Q ss_pred ccccchhhHHHHHHhhhh-cCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhh---cC
Q 012210 165 AIAIQIRDLSQNLVNMIE-EGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQ---SK 240 (468)
Q Consensus 165 G~~~~i~~~a~~la~~l~-~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~---~~ 240 (468)
|.......++..++ . .|+.|+.+|..-.. +..+.+.. +|+.++++++..+ .+
T Consensus 12 g~~~~~~~~~~~la---~~~g~~v~~~~Yrl~p--------------------~~~~p~~~-~D~~~a~~~l~~~~~~~~ 67 (211)
T PF07859_consen 12 GSKESHWPFAARLA---AERGFVVVSIDYRLAP--------------------EAPFPAAL-EDVKAAYRWLLKNADKLG 67 (211)
T ss_dssp CGTTTHHHHHHHHH---HHHTSEEEEEE---TT--------------------TSSTTHHH-HHHHHHHHHHHHTHHHHT
T ss_pred CChHHHHHHHHHHH---hhccEEEEEeeccccc--------------------cccccccc-cccccceeeecccccccc
Confidence 44444566777777 5 89999986664321 22455665 9999999999987 23
Q ss_pred CCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcccccc
Q 012210 241 PKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 286 (468)
Q Consensus 241 ~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~ 286 (468)
.+.++|+++|+|-||.+++.++....... ...++++++++|..+.
T Consensus 68 ~d~~~i~l~G~SAGg~la~~~~~~~~~~~-~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 68 IDPERIVLIGDSAGGHLALSLALRARDRG-LPKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHHHHHTT-TCHESEEEEESCHSST
T ss_pred ccccceEEeecccccchhhhhhhhhhhhc-ccchhhhhcccccccc
Confidence 33459999999999999999998652111 2348999999986654
|
; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A .... |
| >KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=98.56 E-value=1e-05 Score=77.22 Aligned_cols=225 Identities=11% Similarity=0.094 Sum_probs=136.2
Q ss_pred HhhhhcCceEeccCccccccCCccchHHHhhcccceEeecC---ChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehh
Q 012210 178 VNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDW---DFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMG 254 (468)
Q Consensus 178 a~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~---~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~G 254 (468)
++++.+ |.++-+|..|+... .....-|| ++++++ +++..+++++.-+ .++-+|--.|
T Consensus 73 ~ei~~~-fcv~HV~~PGqe~g------------Ap~~p~~y~yPsmd~LA-d~l~~VL~~f~lk------~vIg~GvGAG 132 (326)
T KOG2931|consen 73 AEILEH-FCVYHVDAPGQEDG------------APSFPEGYPYPSMDDLA-DMLPEVLDHFGLK------SVIGMGVGAG 132 (326)
T ss_pred HHHHhh-eEEEecCCCccccC------------CccCCCCCCCCCHHHHH-HHHHHHHHhcCcc------eEEEeccccc
Confidence 344456 99999999887542 22222233 456665 7777777777554 8899999999
Q ss_pred HHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhc---CCCCCchhHH
Q 012210 255 GILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAY---PLSSSPPYVF 331 (468)
Q Consensus 255 G~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 331 (468)
+.|..++|..| |++|-++|++++-..-.. ++.+.. ..+...+. .+.. ....
T Consensus 133 AyIL~rFAl~h-----p~rV~GLvLIn~~~~a~g---wiew~~----------------~K~~s~~l~~~Gmt~--~~~d 186 (326)
T KOG2931|consen 133 AYILARFALNH-----PERVLGLVLINCDPCAKG---WIEWAY----------------NKVSSNLLYYYGMTQ--GVKD 186 (326)
T ss_pred HHHHHHHHhcC-----hhheeEEEEEecCCCCch---HHHHHH----------------HHHHHHHHHhhchhh--hHHH
Confidence 99999999998 999999999987433211 111110 11111000 0110 0111
Q ss_pred HHHHHhhhccc-cCCHHHHHHHHhhccCCCcHHHHHHHHHHHhc-CcccccCCccccccccCccCccEEEEecCCCCcCC
Q 012210 332 SWLNNLISAED-MMHPELLKKLVLNNFCTIPAKLILQLTTAFRE-GGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICP 409 (468)
Q Consensus 332 ~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~D~ivp 409 (468)
..+...++... ....+.++.+....-.......+..++..+.. .++.. ........++||+|++.|+..+.+
T Consensus 187 ~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~-----~r~~~~~tlkc~vllvvGd~Sp~~- 260 (326)
T KOG2931|consen 187 YLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSI-----ERPKLGTTLKCPVLLVVGDNSPHV- 260 (326)
T ss_pred HHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccc-----cCCCcCccccccEEEEecCCCchh-
Confidence 22233333322 23556666555444344444566666665532 11110 001112267799999999998775
Q ss_pred HHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 410 PEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 410 ~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
+.+.++...+......+..+ .++|.....+ +|..+.+.+.=|+..
T Consensus 261 -~~vv~~n~~Ldp~~ttllk~--~d~g~l~~e~------qP~kl~ea~~~FlqG 305 (326)
T KOG2931|consen 261 -SAVVECNSKLDPTYTTLLKM--ADCGGLVQEE------QPGKLAEAFKYFLQG 305 (326)
T ss_pred -hhhhhhhcccCcccceEEEE--cccCCccccc------CchHHHHHHHHHHcc
Confidence 56677777776655677666 7888888876 999999999999874
|
|
| >COG0400 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.3e-06 Score=81.12 Aligned_cols=55 Identities=15% Similarity=0.224 Sum_probs=45.9
Q ss_pred hhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccc
Q 012210 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
..+.++++.+...++.+.++++++|||.|+++++.+..++ +..++++|++.+...
T Consensus 81 ~~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~-----~~~~~~ail~~g~~~ 135 (207)
T COG0400 81 EKLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTL-----PGLFAGAILFSGMLP 135 (207)
T ss_pred HHHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhC-----chhhccchhcCCcCC
Confidence 5666777777777888677999999999999999999987 788999999877443
|
|
| >PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.5e-06 Score=85.55 Aligned_cols=62 Identities=23% Similarity=0.359 Sum_probs=43.6
Q ss_pred ccCccEEEEecCCCCcCCHHHHHHHHHhCCC---CceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 392 KCNIPILAIAGDQDLICPPEAVEETVKLLPE---DLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 392 ~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~---~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
..++|++|.+|..|.++|+.....+.+.+-. ..++++.+ +..+|.... -.-.+..+.||.++
T Consensus 217 ~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~--~~~~H~~~~---------~~~~~~a~~Wl~~r 281 (290)
T PF03583_consen 217 TPTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRY--PGGGHLGAA---------FASAPDALAWLDDR 281 (290)
T ss_pred CCCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEec--CCCChhhhh---------hcCcHHHHHHHHHH
Confidence 3479999999999999999998888876532 34666665 666765543 12235566777655
|
Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process |
| >PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.6e-06 Score=78.37 Aligned_cols=47 Identities=21% Similarity=0.322 Sum_probs=36.9
Q ss_pred CccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCccc
Q 012210 391 HKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYD 442 (468)
Q Consensus 391 ~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e 442 (468)
..+.+|.++|.+++|+++|.+.+.++++.+. + +++.+ +++||+.-.+
T Consensus 111 ~~l~~~~~viaS~nDp~vp~~~a~~~A~~l~-a--~~~~~--~~~GHf~~~~ 157 (171)
T PF06821_consen 111 DPLPFPSIVIASDNDPYVPFERAQRLAQRLG-A--ELIIL--GGGGHFNAAS 157 (171)
T ss_dssp CHHHCCEEEEEETTBSSS-HHHHHHHHHHHT----EEEEE--TS-TTSSGGG
T ss_pred cccCCCeEEEEcCCCCccCHHHHHHHHHHcC-C--CeEEC--CCCCCccccc
Confidence 3456777999999999999999999999996 4 77777 7888877654
|
The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A. |
| >PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively [] | Back alignment and domain information |
|---|
Probab=98.42 E-value=7.9e-07 Score=86.72 Aligned_cols=85 Identities=26% Similarity=0.251 Sum_probs=63.5
Q ss_pred hcCceEeccCccccccCCccchHHHhhcccceEeecC-ChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHH
Q 012210 182 EEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDW-DFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYA 260 (468)
Q Consensus 182 ~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~-~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~ 260 (468)
.+||.|+..|.+|.+... |. ++. ...+ . +|..++|+++..+.-++ ++|+++|.|++|...+.
T Consensus 55 ~~GY~vV~~D~RG~g~S~----------G~----~~~~~~~e-~-~D~~d~I~W~~~Qpws~-G~VGm~G~SY~G~~q~~ 117 (272)
T PF02129_consen 55 ERGYAVVVQDVRGTGGSE----------GE----FDPMSPNE-A-QDGYDTIEWIAAQPWSN-GKVGMYGISYGGFTQWA 117 (272)
T ss_dssp HTT-EEEEEE-TTSTTS-----------S-----B-TTSHHH-H-HHHHHHHHHHHHCTTEE-EEEEEEEETHHHHHHHH
T ss_pred hCCCEEEEECCcccccCC----------Cc----cccCChhH-H-HHHHHHHHHHHhCCCCC-CeEEeeccCHHHHHHHH
Confidence 899999999999986631 11 111 2233 3 99999999999985554 89999999999999999
Q ss_pred HHHhcCCCCCcccccceeEEccccccCC
Q 012210 261 MLSRCGFEGRESRLAAIVTLASSLDYTS 288 (468)
Q Consensus 261 ~a~~~~~~~~p~~V~~lVllap~~~~~~ 288 (468)
.|+.. |+.+++++...+..+...
T Consensus 118 ~A~~~-----~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 118 AAARR-----PPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp HHTTT------TTEEEEEEESE-SBTCC
T ss_pred HHhcC-----CCCceEEEecccCCcccc
Confidence 99854 899999999988776654
|
It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A .... |
| >PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases | Back alignment and domain information |
|---|
Probab=98.41 E-value=8.6e-06 Score=75.74 Aligned_cols=205 Identities=14% Similarity=0.177 Sum_probs=99.0
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.+++----++...+|..|+ ..||.|+.+|-..|.+--.+.+ -++++... ..|+..+++|++
T Consensus 33 iliA~Gf~rrmdh~agLA~YL~---~NGFhViRyDsl~HvGlSsG~I------------~eftms~g-~~sL~~V~dwl~ 96 (294)
T PF02273_consen 33 ILIAPGFARRMDHFAGLAEYLS---ANGFHVIRYDSLNHVGLSSGDI------------NEFTMSIG-KASLLTVIDWLA 96 (294)
T ss_dssp EEEE-TT-GGGGGGHHHHHHHH---TTT--EEEE---B-------------------------HHHH-HHHHHHHHHHHH
T ss_pred EEEecchhHHHHHHHHHHHHHh---hCCeEEEeccccccccCCCCCh------------hhcchHHh-HHHHHHHHHHHH
Confidence 3443444444566666777777 9999999999988866322222 24466665 499999999999
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhH
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAL 316 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
.+ +.. ++.++.-|+.|.+|+..|++ . ++.-+|+..+....... +.....+.
T Consensus 97 ~~-g~~--~~GLIAaSLSaRIAy~Va~~------i-~lsfLitaVGVVnlr~T---Le~al~~D---------------- 147 (294)
T PF02273_consen 97 TR-GIR--RIGLIAASLSARIAYEVAAD------I-NLSFLITAVGVVNLRDT---LEKALGYD---------------- 147 (294)
T ss_dssp HT-T-----EEEEEETTHHHHHHHHTTT------S---SEEEEES--S-HHHH---HHHHHSS-----------------
T ss_pred hc-CCC--cchhhhhhhhHHHHHHHhhc------c-CcceEEEEeeeeeHHHH---HHHHhccc----------------
Confidence 44 554 89999999999999999975 3 56666666554443211 11110000
Q ss_pred HHHhcCCCCCchhHHHHHHHhhhc----cccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCc
Q 012210 317 LTAAYPLSSSPPYVFSWLNNLISA----EDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHK 392 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 392 (468)
++..++..+... ....+.+. +.+-+....+... ......+++
T Consensus 148 ------------yl~~~i~~lp~dldfeGh~l~~~v-------------------Fv~dc~e~~w~~l---~ST~~~~k~ 193 (294)
T PF02273_consen 148 ------------YLQLPIEQLPEDLDFEGHNLGAEV-------------------FVTDCFEHGWDDL---DSTINDMKR 193 (294)
T ss_dssp ------------GGGS-GGG--SEEEETTEEEEHHH-------------------HHHHHHHTT-SSH---HHHHHHHTT
T ss_pred ------------hhhcchhhCCCcccccccccchHH-------------------HHHHHHHcCCccc---hhHHHHHhh
Confidence 000000000000 00011111 1111111111100 011346778
Q ss_pred cCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCccc
Q 012210 393 CNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYD 442 (468)
Q Consensus 393 I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e 442 (468)
++||++.+++.+|.++....+.++...+.....++..+ +|+.|-.-.-
T Consensus 194 l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl--~Gs~HdL~en 241 (294)
T PF02273_consen 194 LSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSL--PGSSHDLGEN 241 (294)
T ss_dssp --S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEE--TT-SS-TTSS
T ss_pred CCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEe--cCccchhhhC
Confidence 89999999999999999999999999888775555555 8888876643
|
Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B. |
| >PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A | Back alignment and domain information |
|---|
Probab=98.39 E-value=2.7e-06 Score=86.76 Aligned_cols=130 Identities=12% Similarity=0.099 Sum_probs=69.6
Q ss_pred ccCchhhhhhHHhhhccccccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccc--hHH--Hhhc----
Q 012210 138 LEDSQLSEGFNEIRGKLSSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFST--IDD--FQKQ---- 209 (468)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~--~~~--l~~~---- 209 (468)
..|..+... ++.+.++=+|+..|.......++..|| .+||.|++++..+........ ... ....
T Consensus 89 ~~~a~~~~~-----~~~PvvIFSHGlgg~R~~yS~~~~eLA---S~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~ 160 (379)
T PF03403_consen 89 YWNAPLSPP-----GKFPVVIFSHGLGGSRTSYSAICGELA---SHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVE 160 (379)
T ss_dssp EET--B--S-----S-EEEEEEE--TT--TTTTHHHHHHHH---HTT-EEEEE---SS-SSEEEE-SSHHHHHHT-----
T ss_pred ccCcccccC-----CCCCEEEEeCCCCcchhhHHHHHHHHH---hCCeEEEEeccCCCceeEEEeccCCCcccccccccc
Confidence 555555433 677778887777777788888999999 999999999988865442222 010 0000
Q ss_pred ccceEeecC---------C-----hhhHHhhhHHHHHHHHHhhc--------------------CCCCCcEEEEEEehhH
Q 012210 210 LDLIVQYDW---------D-----FDHYLEEDVPAAMEYIRAQS--------------------KPKDGKLLAIGHSMGG 255 (468)
Q Consensus 210 ~~~~~~~D~---------~-----~~~~~~~D~~a~i~~l~~~~--------------------~~~~~~v~lvGhS~GG 255 (468)
........+ . .+.. ..|+..+++.|.... ..+..+++++|||+||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~R~~QL~~R-~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGG 239 (379)
T PF03403_consen 161 YLEEEWIPLRDFDPEEEFELRNAQLRQR-VAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGG 239 (379)
T ss_dssp ----EEEE-----GGGHHHHHHHHHHHH-HHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHH
T ss_pred ccccceeccccccchhHHHHHHHHHHHH-HHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchH
Confidence 000000001 0 1112 366777777775311 0112479999999999
Q ss_pred HHHHHHHHhcCCCCCcccccceeEEcc
Q 012210 256 ILLYAMLSRCGFEGRESRLAAIVTLAS 282 (468)
Q Consensus 256 ~ia~~~a~~~~~~~~p~~V~~lVllap 282 (468)
..++..+.. ..++++.|++++
T Consensus 240 ATa~~~l~~------d~r~~~~I~LD~ 260 (379)
T PF03403_consen 240 ATALQALRQ------DTRFKAGILLDP 260 (379)
T ss_dssp HHHHHHHHH-------TT--EEEEES-
T ss_pred HHHHHHHhh------ccCcceEEEeCC
Confidence 999998887 788999999876
|
|
| >PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A | Back alignment and domain information |
|---|
Probab=98.38 E-value=2.8e-07 Score=91.64 Aligned_cols=100 Identities=16% Similarity=0.275 Sum_probs=67.1
Q ss_pred hhHHHHHHhhhhcCceEeccCccccccCCccch---------HHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCC
Q 012210 171 RDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTI---------DDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKP 241 (468)
Q Consensus 171 ~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~---------~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~ 241 (468)
.+++..|| ++||.|++||.++.+.+..... ..+.. ......+++..+...|...++++|..+..+
T Consensus 150 ~~~g~~LA---k~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~---~~l~lG~S~~G~~~~ddmr~lDfL~slpeV 223 (390)
T PF12715_consen 150 QDYGDQLA---KRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALAR---NLLMLGRSLAGLMAWDDMRALDFLASLPEV 223 (390)
T ss_dssp T-HHHHHH---TTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHH---HHHHTT--HHHHHHHHHHHHHHHHCT-TTE
T ss_pred ccHHHHHH---hCCCEEEEEccccccccccccccccccchhHHHHHH---HHHHcCcCHHHHHHHHHHHHHHHHhcCccc
Confidence 55788899 9999999999999887532110 01100 001123355555567788899999999888
Q ss_pred CCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcc
Q 012210 242 KDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLAS 282 (468)
Q Consensus 242 ~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap 282 (468)
+.++|+++||||||..++.+|+. .++|++.|..+-
T Consensus 224 D~~RIG~~GfSmGg~~a~~LaAL------DdRIka~v~~~~ 258 (390)
T PF12715_consen 224 DPDRIGCMGFSMGGYRAWWLAAL------DDRIKATVANGY 258 (390)
T ss_dssp EEEEEEEEEEGGGHHHHHHHHHH-------TT--EEEEES-
T ss_pred CccceEEEeecccHHHHHHHHHc------chhhHhHhhhhh
Confidence 87899999999999999999998 899998887654
|
|
| >PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Probab=98.34 E-value=1.9e-05 Score=75.37 Aligned_cols=91 Identities=14% Similarity=0.057 Sum_probs=62.6
Q ss_pred cchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEE
Q 012210 168 IQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLL 247 (468)
Q Consensus 168 ~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~ 247 (468)
..++-+...|. ..|.|+|+..++|.+..- ++. ...|+-.+. ..++..+....+.+ +++.
T Consensus 49 ~DFkYi~~~l~---~~~iR~I~iN~PGf~~t~----------~~~--~~~~~n~er-----~~~~~~ll~~l~i~-~~~i 107 (297)
T PF06342_consen 49 NDFKYIRPPLD---EAGIRFIGINYPGFGFTP----------GYP--DQQYTNEER-----QNFVNALLDELGIK-GKLI 107 (297)
T ss_pred cchhhhhhHHH---HcCeEEEEeCCCCCCCCC----------CCc--ccccChHHH-----HHHHHHHHHHcCCC-CceE
Confidence 45566777788 999999999998875421 111 112233333 34444454454544 6999
Q ss_pred EEEEehhHHHHHHHHHhcCCCCCcccccceeEEcccccc
Q 012210 248 AIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 286 (468)
Q Consensus 248 lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~ 286 (468)
++|||.|+-.|+.+|..+ ++.++++++|+.-.
T Consensus 108 ~~gHSrGcenal~la~~~-------~~~g~~lin~~G~r 139 (297)
T PF06342_consen 108 FLGHSRGCENALQLAVTH-------PLHGLVLINPPGLR 139 (297)
T ss_pred EEEeccchHHHHHHHhcC-------ccceEEEecCCccc
Confidence 999999999999999974 46799999886543
|
|
| >PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.2e-05 Score=76.76 Aligned_cols=106 Identities=21% Similarity=0.285 Sum_probs=71.2
Q ss_pred ccccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHH
Q 012210 155 SSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEY 234 (468)
Q Consensus 155 ~~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~ 234 (468)
+.++-.+.+.-.+....++.+++| .+||.|+++|++..... . . ..+ . +++.+++++
T Consensus 18 PVv~f~~G~~~~~s~Ys~ll~hvA---ShGyIVV~~d~~~~~~~-~-~-----------------~~~-~-~~~~~vi~W 73 (259)
T PF12740_consen 18 PVVLFLHGFLLINSWYSQLLEHVA---SHGYIVVAPDLYSIGGP-D-D-----------------TDE-V-ASAAEVIDW 73 (259)
T ss_pred CEEEEeCCcCCCHHHHHHHHHHHH---hCceEEEEecccccCCC-C-c-----------------chh-H-HHHHHHHHH
Confidence 334554555555677889999999 99999999997764321 0 0 111 1 555555666
Q ss_pred HHhhc--------CCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcccc
Q 012210 235 IRAQS--------KPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSL 284 (468)
Q Consensus 235 l~~~~--------~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~ 284 (468)
+.+.. ..+-.++.+.|||-||-+++.++..+.....+.+++++++++|.-
T Consensus 74 l~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 74 LAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred HHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 54421 123358999999999999999998752222245899999998854
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.31 E-value=1.1e-05 Score=71.59 Aligned_cols=65 Identities=18% Similarity=0.189 Sum_probs=45.8
Q ss_pred CccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 391 HKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 391 ~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
.+.--|.+++.+.+|++++++.++.+.+.+... ++.. .++||..-.. |-..-.+....+.+|+.+
T Consensus 114 ~~lpfps~vvaSrnDp~~~~~~a~~~a~~wgs~---lv~~--g~~GHiN~~s---G~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 114 EPLPFPSVVVASRNDPYVSYEHAEDLANAWGSA---LVDV--GEGGHINAES---GFGPWPEGYALLAQLLSR 178 (181)
T ss_pred ccCCCceeEEEecCCCCCCHHHHHHHHHhccHh---heec--ccccccchhh---cCCCcHHHHHHHHHHhhh
Confidence 345679999999999999999999999999974 5554 4555543332 222445666677776654
|
|
| >PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO | Back alignment and domain information |
|---|
Probab=98.29 E-value=4.7e-05 Score=69.80 Aligned_cols=53 Identities=17% Similarity=0.142 Sum_probs=36.4
Q ss_pred CccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHH
Q 012210 394 NIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFL 461 (468)
Q Consensus 394 ~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL 461 (468)
..++++++++.|.+++.+.+...+ .++ ..++. ++++|-.- .-++..+.|.+|+
T Consensus 134 ~~~~lvll~~~DEvLd~~~a~~~~---~~~-~~~i~---~ggdH~f~--------~f~~~l~~i~~f~ 186 (187)
T PF05728_consen 134 PERYLVLLQTGDEVLDYREAVAKY---RGC-AQIIE---EGGDHSFQ--------DFEEYLPQIIAFL 186 (187)
T ss_pred CccEEEEEecCCcccCHHHHHHHh---cCc-eEEEE---eCCCCCCc--------cHHHHHHHHHHhh
Confidence 579999999999999986554443 443 24444 56777443 2267778888886
|
One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised. |
| >cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes | Back alignment and domain information |
|---|
Probab=98.28 E-value=1.7e-06 Score=84.52 Aligned_cols=115 Identities=10% Similarity=0.000 Sum_probs=74.6
Q ss_pred hccccccccccccccc--cchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHH
Q 012210 152 GKLSSLLERRQSSAIA--IQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVP 229 (468)
Q Consensus 152 ~~~~~ll~~~~~~G~~--~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~ 229 (468)
...+.++-.|.+.+-. .....+++.+. ...+|.|+++|+.+.... .... ...+..... +++.
T Consensus 34 ~~~p~vilIHG~~~~~~~~~~~~l~~~ll--~~~~~nVi~vD~~~~~~~--~y~~-----------a~~~~~~v~-~~la 97 (275)
T cd00707 34 PSRPTRFIIHGWTSSGEESWISDLRKAYL--SRGDYNVIVVDWGRGANP--NYPQ-----------AVNNTRVVG-AELA 97 (275)
T ss_pred CCCCcEEEEcCCCCCCCCcHHHHHHHHHH--hcCCCEEEEEECcccccc--ChHH-----------HHHhHHHHH-HHHH
Confidence 3334455545554432 22344555443 136899999998665221 0000 011233444 7888
Q ss_pred HHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccC
Q 012210 230 AAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYT 287 (468)
Q Consensus 230 a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~ 287 (468)
.+++.|....+...+++++|||||||.++..++.++ +++|.++|+++|..+..
T Consensus 98 ~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~-----~~~v~~iv~LDPa~p~f 150 (275)
T cd00707 98 KFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRL-----NGKLGRITGLDPAGPLF 150 (275)
T ss_pred HHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHh-----cCccceeEEecCCcccc
Confidence 999998876544445899999999999999999987 77999999999876553
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins | Back alignment and domain information |
|---|
Probab=98.27 E-value=9.9e-06 Score=73.35 Aligned_cols=96 Identities=19% Similarity=0.205 Sum_probs=69.7
Q ss_pred ccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCC
Q 012210 163 SSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPK 242 (468)
Q Consensus 163 ~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~ 242 (468)
-.|.++--+.+++.|+ .+|+.|+..|.+.+- |. .-+.++.+ .|+..++++...+.+.+
T Consensus 11 DgGw~~~d~~~a~~l~---~~G~~VvGvdsl~Yf--w~----------------~rtP~~~a-~Dl~~~i~~y~~~w~~~ 68 (192)
T PF06057_consen 11 DGGWRDLDKQIAEALA---KQGVPVVGVDSLRYF--WS----------------ERTPEQTA-ADLARIIRHYRARWGRK 68 (192)
T ss_pred CCCchhhhHHHHHHHH---HCCCeEEEechHHHH--hh----------------hCCHHHHH-HHHHHHHHHHHHHhCCc
Confidence 3466666688999999 999999987665431 00 01344554 99999999999988876
Q ss_pred CCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccc
Q 012210 243 DGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASS 283 (468)
Q Consensus 243 ~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~ 283 (468)
++.|+|+|+|+-+.-....+.+.. ...+|..++++++.
T Consensus 69 --~vvLiGYSFGADvlP~~~nrLp~~-~r~~v~~v~Ll~p~ 106 (192)
T PF06057_consen 69 --RVVLIGYSFGADVLPFIYNRLPAA-LRARVAQVVLLSPS 106 (192)
T ss_pred --eEEEEeecCCchhHHHHHhhCCHH-HHhheeEEEEeccC
Confidence 999999999997776666665211 13468888888764
|
VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium []. |
| >PF10503 Esterase_phd: Esterase PHB depolymerase | Back alignment and domain information |
|---|
Probab=98.27 E-value=2e-05 Score=74.05 Aligned_cols=53 Identities=17% Similarity=0.319 Sum_probs=46.5
Q ss_pred hhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccc
Q 012210 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASS 283 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~ 283 (468)
..+.++++++..++.++..+|++.|+|.||+++..++..| |+.+.++..+++.
T Consensus 79 ~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~-----pd~faa~a~~sG~ 131 (220)
T PF10503_consen 79 AFIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAY-----PDLFAAVAVVSGV 131 (220)
T ss_pred hhHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhC-----CccceEEEeeccc
Confidence 5677889999999988888999999999999999999998 8888887776653
|
|
| >TIGR03230 lipo_lipase lipoprotein lipase | Back alignment and domain information |
|---|
Probab=98.26 E-value=4.6e-06 Score=85.86 Aligned_cols=85 Identities=9% Similarity=-0.014 Sum_probs=62.8
Q ss_pred CceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHH
Q 012210 184 GQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLS 263 (468)
Q Consensus 184 Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~ 263 (468)
.|+|+++|+.+++... +... .. ....++ +++.+++++|....+...+++++|||||||.+|..++.
T Consensus 73 d~nVI~VDw~g~g~s~-----------y~~a-~~-~t~~vg-~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~ 138 (442)
T TIGR03230 73 SANVIVVDWLSRAQQH-----------YPTS-AA-YTKLVG-KDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGS 138 (442)
T ss_pred CCEEEEEECCCcCCCC-----------Cccc-cc-cHHHHH-HHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHH
Confidence 6999999998875421 1100 01 123444 78899999987665544459999999999999999988
Q ss_pred hcCCCCCcccccceeEEccccccC
Q 012210 264 RCGFEGRESRLAAIVTLASSLDYT 287 (468)
Q Consensus 264 ~~~~~~~p~~V~~lVllap~~~~~ 287 (468)
++ +.+|.++++++|..+..
T Consensus 139 ~~-----p~rV~rItgLDPAgP~F 157 (442)
T TIGR03230 139 LT-----KHKVNRITGLDPAGPTF 157 (442)
T ss_pred hC-----CcceeEEEEEcCCCCcc
Confidence 76 78899999999876543
|
Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity. |
| >PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=98.22 E-value=1.7e-05 Score=74.63 Aligned_cols=92 Identities=18% Similarity=0.310 Sum_probs=64.6
Q ss_pred ccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhc-------
Q 012210 167 AIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQS------- 239 (468)
Q Consensus 167 ~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~------- 239 (468)
|....++-++++ .+||.|+||+++.... .. ..++ + ++..++++|+...+
T Consensus 59 ns~Ys~lL~HIA---SHGfIVVAPQl~~~~~--p~-----------------~~~E-i-~~aa~V~~WL~~gL~~~Lp~~ 114 (307)
T PF07224_consen 59 NSFYSQLLAHIA---SHGFIVVAPQLYTLFP--PD-----------------GQDE-I-KSAASVINWLPEGLQHVLPEN 114 (307)
T ss_pred hHHHHHHHHHHh---hcCeEEEechhhcccC--CC-----------------chHH-H-HHHHHHHHHHHhhhhhhCCCC
Confidence 455566666666 9999999999987532 11 1122 2 66677777776542
Q ss_pred -CCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccc
Q 012210 240 -KPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 240 -~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
..+..|+.++|||.||-.|+.+|..|. ..-++.++|.++|...
T Consensus 115 V~~nl~klal~GHSrGGktAFAlALg~a---~~lkfsaLIGiDPV~G 158 (307)
T PF07224_consen 115 VEANLSKLALSGHSRGGKTAFALALGYA---TSLKFSALIGIDPVAG 158 (307)
T ss_pred cccccceEEEeecCCccHHHHHHHhccc---ccCchhheecccccCC
Confidence 123469999999999999999999862 2456888888887544
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.21 E-value=5.5e-06 Score=91.48 Aligned_cols=191 Identities=15% Similarity=0.115 Sum_probs=121.6
Q ss_pred hhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHH
Q 012210 181 IEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYA 260 (468)
Q Consensus 181 l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~ 260 (468)
...|+.|+..|..|.++.+......+.+ ++.-.+ .+|...+++++.+..-.+..++.++|+|.||.+++.
T Consensus 555 s~~g~~v~~vd~RGs~~~G~~~~~~~~~--------~lG~~e--v~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~ 624 (755)
T KOG2100|consen 555 SSRGFAVLQVDGRGSGGYGWDFRSALPR--------NLGDVE--VKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLK 624 (755)
T ss_pred ccCCeEEEEEcCCCcCCcchhHHHHhhh--------hcCCcc--hHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHH
Confidence 3789999999999887754443333321 112223 388889999988887777779999999999999999
Q ss_pred HHHhcCCCCCcccccce-eEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCchhHHHHHHHhhh
Q 012210 261 MLSRCGFEGRESRLAAI-VTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLIS 339 (468)
Q Consensus 261 ~a~~~~~~~~p~~V~~l-Vllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 339 (468)
++... +.++.++ +.++|..+...... . . ..++
T Consensus 625 ~l~~~-----~~~~fkcgvavaPVtd~~~yds-~----------------------~-------------tery------ 657 (755)
T KOG2100|consen 625 LLESD-----PGDVFKCGVAVAPVTDWLYYDS-T----------------------Y-------------TERY------ 657 (755)
T ss_pred HhhhC-----cCceEEEEEEecceeeeeeecc-c----------------------c-------------cHhh------
Confidence 99874 4355554 88888766431100 0 0 0000
Q ss_pred ccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccE-EEEecCCCCcCCHHHHHHHHH
Q 012210 340 AEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPI-LAIAGDQDLICPPEAVEETVK 418 (468)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPv-LiI~G~~D~ivp~~~~~~l~~ 418 (468)
...|......+.. ......+..++.|. |++||+.|..++.+++..+.+
T Consensus 658 ------------------mg~p~~~~~~y~e-------------~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~ 706 (755)
T KOG2100|consen 658 ------------------MGLPSENDKGYEE-------------SSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIK 706 (755)
T ss_pred ------------------cCCCccccchhhh-------------ccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHH
Confidence 0000000000100 01123456666666 999999999999999999998
Q ss_pred hCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 419 LLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 419 ~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
.+....+.+..+-+|+..|..-.- +.-..+...+..|+...
T Consensus 707 aL~~~gv~~~~~vypde~H~is~~-----~~~~~~~~~~~~~~~~~ 747 (755)
T KOG2100|consen 707 ALQNAGVPFRLLVYPDENHGISYV-----EVISHLYEKLDRFLRDC 747 (755)
T ss_pred HHHHCCCceEEEEeCCCCcccccc-----cchHHHHHHHHHHHHHH
Confidence 887665555444448888865542 13356778888888743
|
|
| >PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics [] | Back alignment and domain information |
|---|
Probab=98.19 E-value=4.8e-05 Score=71.68 Aligned_cols=103 Identities=17% Similarity=0.172 Sum_probs=66.5
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
|+--|...|-....+.+++.+. ..++.|++....+.... . ....++++++ +++.+ .++
T Consensus 3 lf~~p~~gG~~~~y~~la~~l~---~~~~~v~~i~~~~~~~~------------~---~~~~si~~la-~~y~~---~I~ 60 (229)
T PF00975_consen 3 LFCFPPAGGSASSYRPLARALP---DDVIGVYGIEYPGRGDD------------E---PPPDSIEELA-SRYAE---AIR 60 (229)
T ss_dssp EEEESSTTCSGGGGHHHHHHHT---TTEEEEEEECSTTSCTT------------S---HEESSHHHHH-HHHHH---HHH
T ss_pred EEEEcCCccCHHHHHHHHHhCC---CCeEEEEEEecCCCCCC------------C---CCCCCHHHHH-HHHHH---Hhh
Confidence 3445666677777788888887 33577777666665310 0 0112566665 44444 444
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccc
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
...+. +++.++|||+||.+|+.+|.+... ....+..+++++++.+
T Consensus 61 ~~~~~--gp~~L~G~S~Gg~lA~E~A~~Le~--~G~~v~~l~liD~~~p 105 (229)
T PF00975_consen 61 ARQPE--GPYVLAGWSFGGILAFEMARQLEE--AGEEVSRLILIDSPPP 105 (229)
T ss_dssp HHTSS--SSEEEEEETHHHHHHHHHHHHHHH--TT-SESEEEEESCSST
T ss_pred hhCCC--CCeeehccCccHHHHHHHHHHHHH--hhhccCceEEecCCCC
Confidence 43332 499999999999999999998621 1346888999986544
|
Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A .... |
| >PLN02733 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=98.18 E-value=5.8e-06 Score=85.52 Aligned_cols=101 Identities=19% Similarity=0.245 Sum_probs=74.2
Q ss_pred ccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCC
Q 012210 165 AIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDG 244 (468)
Q Consensus 165 G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~ 244 (468)
+...++..+.+.|+ ..||.+ ..|+++.+-.|+.. ...+++. +++.+.++.+....+..
T Consensus 105 ~~~~~~~~li~~L~---~~GY~~-~~dL~g~gYDwR~~---------------~~~~~~~-~~Lk~lIe~~~~~~g~~-- 162 (440)
T PLN02733 105 DEVYYFHDMIEQLI---KWGYKE-GKTLFGFGYDFRQS---------------NRLPETM-DGLKKKLETVYKASGGK-- 162 (440)
T ss_pred chHHHHHHHHHHHH---HcCCcc-CCCcccCCCCcccc---------------ccHHHHH-HHHHHHHHHHHHHcCCC--
Confidence 34567788889998 999966 77998886544321 0134555 88899999888876665
Q ss_pred cEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCC
Q 012210 245 KLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTS 288 (468)
Q Consensus 245 ~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~ 288 (468)
+++++||||||.++..++..++... ...|+++|++++++.-..
T Consensus 163 kV~LVGHSMGGlva~~fl~~~p~~~-~k~I~~~I~la~P~~Gs~ 205 (440)
T PLN02733 163 KVNIISHSMGGLLVKCFMSLHSDVF-EKYVNSWIAIAAPFQGAP 205 (440)
T ss_pred CEEEEEECHhHHHHHHHHHHCCHhH-HhHhccEEEECCCCCCCc
Confidence 9999999999999999998762111 235899999998766443
|
|
| >PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family | Back alignment and domain information |
|---|
Probab=98.10 E-value=5.2e-06 Score=77.91 Aligned_cols=48 Identities=27% Similarity=0.428 Sum_probs=32.3
Q ss_pred cCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcc
Q 012210 390 IHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHY 441 (468)
Q Consensus 390 l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~ 441 (468)
-.+|++|+|-|+|.+|.+++++..+.+.+.+.+. .+++.. ++||....
T Consensus 157 ~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~-~~v~~h---~gGH~vP~ 204 (212)
T PF03959_consen 157 EPKISIPTLHVIGENDPVVPPERSEALAEMFDPD-ARVIEH---DGGHHVPR 204 (212)
T ss_dssp -TT---EEEEEEETT-SSS-HHHHHHHHHHHHHH-EEEEEE---SSSSS---
T ss_pred cccCCCCeEEEEeCCCCCcchHHHHHHHHhccCC-cEEEEE---CCCCcCcC
Confidence 3568999999999999999999999999998873 366665 56776654
|
It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A. |
| >COG4188 Predicted dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.10 E-value=1.4e-05 Score=79.13 Aligned_cols=103 Identities=13% Similarity=0.131 Sum_probs=64.5
Q ss_pred ccccccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHH
Q 012210 153 KLSSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAM 232 (468)
Q Consensus 153 ~~~~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i 232 (468)
+++-++-.+...+.-..+..+++.++ +.||.|.+++..+.... .........+. . ....|-+.. .|+..++
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~~A~~lA---s~Gf~Va~~~hpgs~~~--~~~~~~~~~~~-~--~p~~~~erp-~dis~lL 140 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAWLAEHLA---SYGFVVAAPDHPGSNAG--GAPAAYAGPGS-Y--APAEWWERP-LDISALL 140 (365)
T ss_pred cCCeEEecCCCCCCccchhhhHHHHh---hCceEEEeccCCCcccc--cCChhhcCCcc-c--chhhhhccc-ccHHHHH
Confidence 33445554444444555566788999 99999999888874321 11111110000 0 001233444 8999999
Q ss_pred HHHHhh---c----CCCCCcEEEEEEehhHHHHHHHHHh
Q 012210 233 EYIRAQ---S----KPKDGKLLAIGHSMGGILLYAMLSR 264 (468)
Q Consensus 233 ~~l~~~---~----~~~~~~v~lvGhS~GG~ia~~~a~~ 264 (468)
++|.+. . ..+..+|.++|||+||+.++..+..
T Consensus 141 d~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA 179 (365)
T COG4188 141 DALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGA 179 (365)
T ss_pred HHHHHhhcCcccccccCccceEEEecccccHHHHHhccc
Confidence 999877 2 1234689999999999999999875
|
|
| >KOG3975 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.01 E-value=0.00065 Score=63.54 Aligned_cols=119 Identities=11% Similarity=0.118 Sum_probs=74.0
Q ss_pred ccccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHH
Q 012210 155 SSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEY 234 (468)
Q Consensus 155 ~~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~ 234 (468)
..++..|+|=|+.....+++++|-..+..-..++.....+|-.. ...+.+.+.....--++.+ +.+..=+++
T Consensus 30 ~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~----P~sl~~~~s~~~~eifsL~----~QV~HKlaF 101 (301)
T KOG3975|consen 30 PLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALM----PASLREDHSHTNEEIFSLQ----DQVDHKLAF 101 (301)
T ss_pred eEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccC----Ccccccccccccccccchh----hHHHHHHHH
Confidence 44678889999999999999998744443344554344444331 1111111111111112332 445566677
Q ss_pred HHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccc
Q 012210 235 IRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 235 l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
++...+. +.|++++|||.|+++.+.+.-. .+..-+|.+++++-|.+.
T Consensus 102 ik~~~Pk-~~ki~iiGHSiGaYm~Lqil~~---~k~~~~vqKa~~LFPTIe 148 (301)
T KOG3975|consen 102 IKEYVPK-DRKIYIIGHSIGAYMVLQILPS---IKLVFSVQKAVLLFPTIE 148 (301)
T ss_pred HHHhCCC-CCEEEEEecchhHHHHHHHhhh---cccccceEEEEEecchHH
Confidence 7776554 4799999999999999998864 222457888888887553
|
|
| >COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.00012 Score=68.49 Aligned_cols=63 Identities=27% Similarity=0.322 Sum_probs=55.5
Q ss_pred hhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccc
Q 012210 220 FDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 220 ~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
..++. .-+..++.+|..++++. ++.+|||||||.-...|+..|+....-+.+.++|.+++++.
T Consensus 115 ~~~~s-~wlk~~msyL~~~Y~i~--k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 115 GLDQS-KWLKKAMSYLQKHYNIP--KFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred hhhHH-HHHHHHHHHHHHhcCCc--eeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 34554 77899999999999997 99999999999999999999987777788999999998766
|
|
| >TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family | Back alignment and domain information |
|---|
Probab=97.91 E-value=2.6e-05 Score=85.29 Aligned_cols=99 Identities=12% Similarity=0.125 Sum_probs=63.4
Q ss_pred cccccccchhhHHHHHHhhhhcCceEeccCccccccC-CccchHHHhh-cccceEee--------cCChhhHHhhhHHHH
Q 012210 162 QSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQER-LFSTIDDFQK-QLDLIVQY--------DWDFDHYLEEDVPAA 231 (468)
Q Consensus 162 ~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~-~~~~~~~l~~-~~~~~~~~--------D~~~~~~~~~D~~a~ 231 (468)
+..|-...+..++++|+ .+||+|+++|+.+|+.+ |....+.... .......+ ..++.+++ .|+..+
T Consensus 457 G~~g~~~~~~~lA~~La---~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v-~Dll~L 532 (792)
T TIGR03502 457 GITGAKENALAFAGTLA---AAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSI-LDLLGL 532 (792)
T ss_pred CCCCCHHHHHHHHHHHH---hCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHH-HHHHHH
Confidence 33333444566677777 89999999999999876 4321110000 00001011 11677776 999999
Q ss_pred HHHHH------hhc----CCCCCcEEEEEEehhHHHHHHHHHh
Q 012210 232 MEYIR------AQS----KPKDGKLLAIGHSMGGILLYAMLSR 264 (468)
Q Consensus 232 i~~l~------~~~----~~~~~~v~lvGhS~GG~ia~~~a~~ 264 (468)
...++ ... ..+..+++++||||||+++..++..
T Consensus 533 ~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 533 RLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 99887 220 1223599999999999999999986
|
Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae |
| >COG0657 Aes Esterase/lipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00031 Score=69.83 Aligned_cols=93 Identities=27% Similarity=0.239 Sum_probs=63.5
Q ss_pred hhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhc---CCCCCcEE
Q 012210 171 RDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQS---KPKDGKLL 247 (468)
Q Consensus 171 ~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~---~~~~~~v~ 247 (468)
..++..++ ..|+.|+.+|..---+ +.+.... +|+.+++.++..+. +.+.++|.
T Consensus 100 ~~~~~~~~---~~g~~vv~vdYrlaPe--------------------~~~p~~~-~d~~~a~~~l~~~~~~~g~dp~~i~ 155 (312)
T COG0657 100 ALVARLAA---AAGAVVVSVDYRLAPE--------------------HPFPAAL-EDAYAAYRWLRANAAELGIDPSRIA 155 (312)
T ss_pred HHHHHHHH---HcCCEEEecCCCCCCC--------------------CCCCchH-HHHHHHHHHHHhhhHhhCCCccceE
Confidence 33444444 7899999977744311 1333444 88999999998763 44456899
Q ss_pred EEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCC
Q 012210 248 AIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTS 288 (468)
Q Consensus 248 lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~ 288 (468)
++|+|-||.+++.++..-... ..+...+.+++.|..+...
T Consensus 156 v~GdSAGG~La~~~a~~~~~~-~~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 156 VAGDSAGGHLALALALAARDR-GLPLPAAQVLISPLLDLTS 195 (312)
T ss_pred EEecCcccHHHHHHHHHHHhc-CCCCceEEEEEecccCCcc
Confidence 999999999999998873100 1235788888888766543
|
|
| >KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00029 Score=70.32 Aligned_cols=98 Identities=15% Similarity=0.153 Sum_probs=65.2
Q ss_pred cchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhh----cCCCC
Q 012210 168 IQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQ----SKPKD 243 (468)
Q Consensus 168 ~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~----~~~~~ 243 (468)
...-.++.+++. ..+-.|+++|.+--- ++.+..-. +|-.+++.|+..+ .+.+.
T Consensus 109 ~~y~~~~~~~a~--~~~~vvvSVdYRLAP--------------------Eh~~Pa~y-~D~~~Al~w~~~~~~~~~~~D~ 165 (336)
T KOG1515|consen 109 PAYDSFCTRLAA--ELNCVVVSVDYRLAP--------------------EHPFPAAY-DDGWAALKWVLKNSWLKLGADP 165 (336)
T ss_pred chhHHHHHHHHH--HcCeEEEecCcccCC--------------------CCCCCccc-hHHHHHHHHHHHhHHHHhCCCc
Confidence 334456666652 557778886663321 11222222 7777778777664 34445
Q ss_pred CcEEEEEEehhHHHHHHHHHhcCCC-CCcccccceeEEccccccCC
Q 012210 244 GKLLAIGHSMGGILLYAMLSRCGFE-GRESRLAAIVTLASSLDYTS 288 (468)
Q Consensus 244 ~~v~lvGhS~GG~ia~~~a~~~~~~-~~p~~V~~lVllap~~~~~~ 288 (468)
++++|+|-|-||.+|..+|.+.... ..+.++++.|++.|......
T Consensus 166 ~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~ 211 (336)
T KOG1515|consen 166 SRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTD 211 (336)
T ss_pred ccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCC
Confidence 5899999999999999999986333 24678999999998665443
|
|
| >COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00017 Score=62.85 Aligned_cols=72 Identities=17% Similarity=0.214 Sum_probs=44.9
Q ss_pred cccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccc-ccc---ccchhhHHHHHHHHHhh
Q 012210 388 DHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDL-VGG---RMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 388 ~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~-~~~---~~~pe~v~~~I~~FL~~ 463 (468)
.++..|++|+||.+|+.|.+-..+.+... .+. ..++++.+ +++.|-.-.-- +.+ .+.-......|..|+..
T Consensus 136 ~HL~gl~tPtli~qGtrD~fGtr~~Va~y--~ls-~~iev~wl--~~adHDLkp~k~vsgls~~~hL~~~A~~va~~~~~ 210 (213)
T COG3571 136 EHLTGLKTPTLITQGTRDEFGTRDEVAGY--ALS-DPIEVVWL--EDADHDLKPRKLVSGLSTADHLKTLAEQVAGWARR 210 (213)
T ss_pred hhccCCCCCeEEeecccccccCHHHHHhh--hcC-CceEEEEe--ccCccccccccccccccHHHHHHHHHHHHHHHHhh
Confidence 56788999999999999999887765222 222 24577777 77777443221 111 11234456677777765
Q ss_pred c
Q 012210 464 Y 464 (468)
Q Consensus 464 ~ 464 (468)
.
T Consensus 211 l 211 (213)
T COG3571 211 L 211 (213)
T ss_pred c
Confidence 3
|
|
| >KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00036 Score=64.30 Aligned_cols=62 Identities=23% Similarity=0.312 Sum_probs=49.2
Q ss_pred cCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 390 IHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 390 l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
.+.|++|.|-|.|+.|.++|...+..+++.++++ .+.. -.+||+... .....+.|.+||...
T Consensus 159 ~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a--~vl~---HpggH~VP~--------~~~~~~~i~~fi~~~ 220 (230)
T KOG2551|consen 159 KRPLSTPSLHIFGETDTIVPSERSEQLAESFKDA--TVLE---HPGGHIVPN--------KAKYKEKIADFIQSF 220 (230)
T ss_pred ccCCCCCeeEEecccceeecchHHHHHHHhcCCC--eEEe---cCCCccCCC--------chHHHHHHHHHHHHH
Confidence 3568999999999999999999999999999997 3333 356787774 356677778887654
|
|
| >PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.0016 Score=64.64 Aligned_cols=58 Identities=21% Similarity=0.337 Sum_probs=43.8
Q ss_pred ccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 012210 395 IPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 462 (468)
Q Consensus 395 vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~ 462 (468)
-.+.++.+++|..+|...+..+.+..|++ ++..+ + +||..-+= ...+.+.+.|.+=++
T Consensus 290 ~~ii~V~A~~DaYVPr~~v~~Lq~~WPGs--EvR~l--~-gGHVsA~L-----~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 290 SAIIFVAAKNDAYVPRHGVLSLQEIWPGS--EVRYL--P-GGHVSAYL-----LHQEAFRQAIYDAFE 347 (348)
T ss_pred CcEEEEEecCceEechhhcchHHHhCCCC--eEEEe--c-CCcEEEee-----echHHHHHHHHHHhh
Confidence 45789999999999999999999999999 55555 3 47754432 155777788877654
|
|
| >COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00082 Score=64.15 Aligned_cols=231 Identities=17% Similarity=0.255 Sum_probs=124.8
Q ss_pred ChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcc
Q 012210 219 DFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLP 298 (468)
Q Consensus 219 ~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~ 298 (468)
++++|+ +-+.+.+.++.. .+++++.|+-+.-++...+.+.....|..-..++++++|++....+.....+..
T Consensus 152 dldDYI-dyvie~~~~~Gp-------~~hv~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDaR~nPTavN~lA~ 223 (415)
T COG4553 152 DLDDYI-DYVIEMINFLGP-------DAHVMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDARKNPTAVNELAT 223 (415)
T ss_pred cHHHHH-HHHHHHHHHhCC-------CCcEEEEecCCchHHHHHHHHHhcCCCCCCceeeeecCccccccCcHHHhHhhh
Confidence 556665 555666555532 689999999998877777766545556677889999999988766554443322
Q ss_pred cCch------------hh--hcCCCCcchHhHHHHhcCCCCCch--hHHHHHHHhhhccccCCHHHHHHHHhhcc--CCC
Q 012210 299 LADP------------AQ--ALNVPVVPLGALLTAAYPLSSSPP--YVFSWLNNLISAEDMMHPELLKKLVLNNF--CTI 360 (468)
Q Consensus 299 ~~~~------------~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~ 360 (468)
.... +. ..+...+|.-..++.+..+...+. .-..++..+... +..+.+...+++...+ ...
T Consensus 224 ~k~~~WF~~n~vm~vP~~ypg~gR~VYPGFlQlagFmsmNldrH~~aH~~~~~~Lv~~-D~~~Ae~h~~FYdEYlavmdl 302 (415)
T COG4553 224 EKSIEWFRDNVVMQVPPPYPGFGRRVYPGFLQLAGFMSMNLDRHIDAHKDFFLSLVKN-DGDSAEKHREFYDEYLAVMDL 302 (415)
T ss_pred ccchHHHHhCeeeecCCCCCCccccccccHHHhhhHhhcChhhhHHHHHHHHHHHHcc-cchhHHHHHHHHHHHHHHccc
Confidence 1111 00 011111111111222222221111 011112222222 2223333333333332 355
Q ss_pred cHHHHHHHHHHH-h-----cCcccccCCccccccccCcc-CccEEEEecCCCCcCCHHHH---HHHHHhCCCCceeEEEe
Q 012210 361 PAKLILQLTTAF-R-----EGGLRDRGGKFFYKDHIHKC-NIPILAIAGDQDLICPPEAV---EETVKLLPEDLVTYKVF 430 (468)
Q Consensus 361 ~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~l~~I-~vPvLiI~G~~D~ivp~~~~---~~l~~~ip~~~~~~~v~ 430 (468)
+++.+.+..... . +|.+..+.. .-+...| +|-.+-|-|+.|.+.-..+. ..+-..||...+.++.-
T Consensus 303 ~aEfYLqTid~VFqq~~LpkG~~vhrg~----~vdp~~I~~~aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~mk~hy~q 378 (415)
T COG4553 303 TAEFYLQTIDEVFQQHALPKGEMVHRGK----PVDPTAITNVALFTVEGENDDISGVGQTKAAHDLCSNIPEDMKQHYMQ 378 (415)
T ss_pred hHHHHHHHHHHHHHHhcccCCceeecCC----cCChhheeceeEEEeecccccccccchhHHHHHHHhcChHHHHHHhcC
Confidence 666666655442 1 122211100 1133445 47889999999999766554 44555566554555543
Q ss_pred cCCCCCCCCcccccccccchhhHHHHHHHHHhhccCC
Q 012210 431 GEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDSV 467 (468)
Q Consensus 431 ~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~~ 467 (468)
|++||++ .+.|+.-++.+.+.|.+|+.++++.
T Consensus 379 --p~vGHYG---VFnGsrfr~eIvPri~dFI~~~d~~ 410 (415)
T COG4553 379 --PDVGHYG---VFNGSRFREEIVPRIRDFIRRYDRS 410 (415)
T ss_pred --CCCCccc---eeccchHHHHHHHHHHHHHHHhCcc
Confidence 5555554 4568888999999999999998764
|
|
| >KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00017 Score=65.46 Aligned_cols=139 Identities=15% Similarity=0.166 Sum_probs=88.7
Q ss_pred ChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcc
Q 012210 219 DFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLP 298 (468)
Q Consensus 219 ~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~ 298 (468)
...+.+ .++...++++.+..... .++.+-|||.|+.+++....+. +.++|.+++++++..+...-
T Consensus 113 tL~qt~-~~~~~gv~filk~~~n~-k~l~~gGHSaGAHLa~qav~R~----r~prI~gl~l~~GvY~l~EL--------- 177 (270)
T KOG4627|consen 113 TLEQTM-TQFTHGVNFILKYTENT-KVLTFGGHSAGAHLAAQAVMRQ----RSPRIWGLILLCGVYDLREL--------- 177 (270)
T ss_pred cHHHHH-HHHHHHHHHHHHhcccc-eeEEEcccchHHHHHHHHHHHh----cCchHHHHHHHhhHhhHHHH---------
Confidence 344554 88888999988876553 4688899999999999988874 37899999998775432110
Q ss_pred cCchhhhcCCCCcchHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCccc
Q 012210 299 LADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLR 378 (468)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (468)
.+.-....-....+..+. .
T Consensus 178 -----------------------------------~~te~g~dlgLt~~~ae~--------------------~------ 196 (270)
T KOG4627|consen 178 -----------------------------------SNTESGNDLGLTERNAES--------------------V------ 196 (270)
T ss_pred -----------------------------------hCCccccccCcccchhhh--------------------c------
Confidence 000000000000000000 0
Q ss_pred ccCCccccccccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCccc
Q 012210 379 DRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYD 442 (468)
Q Consensus 379 ~~~~~~~~~~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e 442 (468)
.-+ ...+..+++|+|++.|.+|.---.+..+.+...+..+ .+..| ++.+|+.-.+
T Consensus 197 ----Scd-l~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~~a--~~~~f--~n~~hy~I~~ 251 (270)
T KOG4627|consen 197 ----SCD-LWEYTDVTVWILVVAAEHESPKLIEQNRDFADQLRKA--SFTLF--KNYDHYDIIE 251 (270)
T ss_pred ----Ccc-HHHhcCceeeeeEeeecccCcHHHHhhhhHHHHhhhc--ceeec--CCcchhhHHH
Confidence 000 1234667899999999999877778888999988877 77887 6656655443
|
|
| >KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00031 Score=73.45 Aligned_cols=90 Identities=16% Similarity=0.147 Sum_probs=62.3
Q ss_pred HHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCC-CCCcEEEEEEeh
Q 012210 175 QNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKP-KDGKLLAIGHSM 253 (468)
Q Consensus 175 ~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~-~~~~v~lvGhS~ 253 (468)
.+|| ..||.|++.|-.|...+.......+....-.+ + .+|-...+++|..+.+. +-++|.+-|+|+
T Consensus 670 ~~La---slGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqV--------E--~eDQVeglq~Laeq~gfidmdrV~vhGWSY 736 (867)
T KOG2281|consen 670 CRLA---SLGYVVVFIDNRGSAHRGLKFESHIKKKMGQV--------E--VEDQVEGLQMLAEQTGFIDMDRVGVHGWSY 736 (867)
T ss_pred hhhh---hcceEEEEEcCCCccccchhhHHHHhhccCee--------e--ehhhHHHHHHHHHhcCcccchheeEecccc
Confidence 4577 89999999888887665444433333221111 2 27888889999888753 446999999999
Q ss_pred hHHHHHHHHHhcCCCCCcccccceeEEccc
Q 012210 254 GGILLYAMLSRCGFEGRESRLAAIVTLASS 283 (468)
Q Consensus 254 GG~ia~~~a~~~~~~~~p~~V~~lVllap~ 283 (468)
||.++++++.+| |. |-++.+.+++
T Consensus 737 GGYLSlm~L~~~-----P~-IfrvAIAGap 760 (867)
T KOG2281|consen 737 GGYLSLMGLAQY-----PN-IFRVAIAGAP 760 (867)
T ss_pred ccHHHHHHhhcC-----cc-eeeEEeccCc
Confidence 999999999996 44 4444444433
|
|
| >PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00025 Score=67.14 Aligned_cols=60 Identities=27% Similarity=0.406 Sum_probs=41.8
Q ss_pred hhHHHHHHHHHhhc---CCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccC
Q 012210 226 EDVPAAMEYIRAQS---KPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYT 287 (468)
Q Consensus 226 ~D~~a~i~~l~~~~---~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~ 287 (468)
+-+..+++++.... .....++++|||||||.++-.++... ...+..|+.+|++++|....
T Consensus 64 ~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~--~~~~~~v~~iitl~tPh~g~ 126 (225)
T PF07819_consen 64 EFLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLP--NYDPDSVKTIITLGTPHRGS 126 (225)
T ss_pred HHHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhcc--ccccccEEEEEEEcCCCCCc
Confidence 44555666665544 22235999999999999999888763 11245799999999876543
|
This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane |
| >PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.0014 Score=66.12 Aligned_cols=163 Identities=15% Similarity=0.138 Sum_probs=97.9
Q ss_pred HHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcC
Q 012210 228 VPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALN 307 (468)
Q Consensus 228 ~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (468)
+.++-+++++..+....++++.|.|==|+.++..|+. ++||++++-+.-..- .....++
T Consensus 156 MD~vq~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa~------D~RV~aivP~Vid~L--N~~~~l~------------- 214 (367)
T PF10142_consen 156 MDAVQEFLKKKFGVNIEKFVVTGASKRGWTTWLTAAV------DPRVKAIVPIVIDVL--NMKANLE------------- 214 (367)
T ss_pred HHHHHHHHHhhcCCCccEEEEeCCchHhHHHHHhhcc------CcceeEEeeEEEccC--CcHHHHH-------------
Confidence 3333344444455556799999999999999999985 889999887754221 1110110
Q ss_pred CCCcchHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhcc-CCCcHHHHHHHHHHHhcCcccccCCcccc
Q 012210 308 VPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNF-CTIPAKLILQLTTAFREGGLRDRGGKFFY 386 (468)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (468)
..+..+ + ...+..+..++...+ ..........+.+.. |.
T Consensus 215 ------------------------h~y~~y-G---~~ws~a~~dY~~~gi~~~l~tp~f~~L~~iv------------DP 254 (367)
T PF10142_consen 215 ------------------------HQYRSY-G---GNWSFAFQDYYNEGITQQLDTPEFDKLMQIV------------DP 254 (367)
T ss_pred ------------------------HHHHHh-C---CCCccchhhhhHhCchhhcCCHHHHHHHHhc------------CH
Confidence 011110 0 001222222222211 112222233333322 12
Q ss_pred ccccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 387 KDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 387 ~~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
.....++++|-++|.|..|.+..++....+...+|+ .+.+..+ |+++|.+-. ..+.+.+..|+..
T Consensus 255 ~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G-~K~lr~v--PN~~H~~~~---------~~~~~~l~~f~~~ 319 (367)
T PF10142_consen 255 YSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPG-EKYLRYV--PNAGHSLIG---------SDVVQSLRAFYNR 319 (367)
T ss_pred HHHHHhcCccEEEEecCCCceeccCchHHHHhhCCC-CeeEEeC--CCCCcccch---------HHHHHHHHHHHHH
Confidence 233466799999999999999999999999999998 5566666 777776653 5566777777765
|
Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily. |
| >KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00038 Score=67.11 Aligned_cols=123 Identities=13% Similarity=0.138 Sum_probs=72.3
Q ss_pred hhccccccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecC------------
Q 012210 151 RGKLSSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDW------------ 218 (468)
Q Consensus 151 ~~~~~~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~------------ 218 (468)
.++.+.++=+++-.|...-...++--|| .+||.|.|+...++...|.+..+.....+..+..|-.
T Consensus 115 ~~k~PvvvFSHGLggsRt~YSa~c~~LA---ShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~ 191 (399)
T KOG3847|consen 115 NDKYPVVVFSHGLGGSRTLYSAYCTSLA---SHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFH 191 (399)
T ss_pred CCCccEEEEecccccchhhHHHHhhhHh---hCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEE
Confidence 4444555554444444555677888888 9999999999999888777665544222222211110
Q ss_pred -ChhhHH--hhhHHHHHHHHHhhc---------------------CCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccc
Q 012210 219 -DFDHYL--EEDVPAAMEYIRAQS---------------------KPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRL 274 (468)
Q Consensus 219 -~~~~~~--~~D~~a~i~~l~~~~---------------------~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V 274 (468)
+-++.. ......+++-|++.. ..+..++.++|||+||..+....+. ..++
T Consensus 192 irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~------~t~F 265 (399)
T KOG3847|consen 192 IRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSS------HTDF 265 (399)
T ss_pred eeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcc------ccce
Confidence 001110 122333333322210 0112368899999999999988876 5678
Q ss_pred cceeEEcc
Q 012210 275 AAIVTLAS 282 (468)
Q Consensus 275 ~~lVllap 282 (468)
++.|+++.
T Consensus 266 rcaI~lD~ 273 (399)
T KOG3847|consen 266 RCAIALDA 273 (399)
T ss_pred eeeeeeee
Confidence 88888764
|
|
| >PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0047 Score=58.89 Aligned_cols=64 Identities=22% Similarity=0.267 Sum_probs=51.7
Q ss_pred CccCccEEEEecCCCCcCCHHHHHHHHHhCCC--CceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHH
Q 012210 391 HKCNIPILAIAGDQDLICPPEAVEETVKLLPE--DLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFL 461 (468)
Q Consensus 391 ~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~--~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL 461 (468)
....+|-|+|+++.|.+++.+.++++.+.... ..+..+.+ ++.+|..|+. ..|++.++.+.+|+
T Consensus 175 ~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f--~~S~HV~H~r-----~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 175 SPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKF--EDSPHVAHLR-----KHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecC--CCCchhhhcc-----cCHHHHHHHHHhhC
Confidence 34569999999999999999988888765543 33455555 8999999986 58999999999885
|
|
| >COG4099 Predicted peptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.00073 Score=64.75 Aligned_cols=52 Identities=23% Similarity=0.315 Sum_probs=44.2
Q ss_pred HHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccc
Q 012210 229 PAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 229 ~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
..+.+.|..+++++..+|+++|.|+||+.++.++.++ |+.+.+.+++++..+
T Consensus 254 dli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kf-----PdfFAaa~~iaG~~d 305 (387)
T COG4099 254 DLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKF-----PDFFAAAVPIAGGGD 305 (387)
T ss_pred HHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhC-----chhhheeeeecCCCc
Confidence 3344477788888888999999999999999999998 999999999987543
|
|
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0017 Score=76.92 Aligned_cols=100 Identities=22% Similarity=0.134 Sum_probs=66.2
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.+...|....++.+++.|. .++.|+++++.+++.. ....+++++++ +++.+.++.+.
T Consensus 1071 l~~lh~~~g~~~~~~~l~~~l~----~~~~v~~~~~~g~~~~---------------~~~~~~l~~la-~~~~~~i~~~~ 1130 (1296)
T PRK10252 1071 LFCFHPASGFAWQFSVLSRYLD----PQWSIYGIQSPRPDGP---------------MQTATSLDEVC-EAHLATLLEQQ 1130 (1296)
T ss_pred eEEecCCCCchHHHHHHHHhcC----CCCcEEEEECCCCCCC---------------CCCCCCHHHHH-HHHHHHHHhhC
Confidence 4444445555445555655554 6799999888776431 01124677776 77777666542
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccc
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASS 283 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~ 283 (468)
. .++++++||||||.+++.+|.++. ..+.++..++++++.
T Consensus 1131 ~-----~~p~~l~G~S~Gg~vA~e~A~~l~--~~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1131 P-----HGPYHLLGYSLGGTLAQGIAARLR--ARGEEVAFLGLLDTW 1170 (1296)
T ss_pred C-----CCCEEEEEechhhHHHHHHHHHHH--HcCCceeEEEEecCC
Confidence 1 138999999999999999998641 125688888888763
|
|
| >PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2 | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.00069 Score=69.55 Aligned_cols=62 Identities=18% Similarity=0.326 Sum_probs=47.3
Q ss_pred hHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCC-CCcccccceeEEccccccC
Q 012210 222 HYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFE-GRESRLAAIVTLASSLDYT 287 (468)
Q Consensus 222 ~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~-~~p~~V~~lVllap~~~~~ 287 (468)
++. ..+...|+...... . .||+||||||||.++..+...+... -....|+++|.+++|+.-.
T Consensus 101 ~~~-~~lk~~ie~~~~~~-~--~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~Gs 163 (389)
T PF02450_consen 101 EYF-TKLKQLIEEAYKKN-G--KKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFGGS 163 (389)
T ss_pred HHH-HHHHHHHHHHHHhc-C--CcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCCCC
Confidence 554 77788888776654 2 4999999999999999999886322 1345799999999877543
|
3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process |
| >COG4782 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0012 Score=65.12 Aligned_cols=109 Identities=17% Similarity=0.304 Sum_probs=73.6
Q ss_pred ccccccchhhHHHHHHhhhh-cCceEeccCccccccCCccchHHHhhcccceEeecCCh--hhHHhhhHHHHHHHHHhhc
Q 012210 163 SSAIAIQIRDLSQNLVNMIE-EGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDF--DHYLEEDVPAAMEYIRAQS 239 (468)
Q Consensus 163 ~~G~~~~i~~~a~~la~~l~-~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~--~~~~~~D~~a~i~~l~~~~ 239 (468)
.||.|....+-..|+++++. .|+.....-+- |++. -.+..|.|+. .+|...++..+|++|....
T Consensus 122 vHGfNntf~dav~R~aqI~~d~g~~~~pVvFS-----WPS~--------g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~ 188 (377)
T COG4782 122 VHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFS-----WPSR--------GSLLGYNYDRESTNYSRPALERLLRYLATDK 188 (377)
T ss_pred EcccCCchhHHHHHHHHHHhhcCCCcceEEEE-----cCCC--------CeeeecccchhhhhhhHHHHHHHHHHHHhCC
Confidence 57777777777777765544 45544432222 2221 1133344433 4577789999999999887
Q ss_pred CCCCCcEEEEEEehhHHHHHHHHHhcCCCC---CcccccceeEEcccccc
Q 012210 240 KPKDGKLLAIGHSMGGILLYAMLSRCGFEG---RESRLAAIVTLASSLDY 286 (468)
Q Consensus 240 ~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~---~p~~V~~lVllap~~~~ 286 (468)
+.. +|+|++||||.++++.++.++.... .+.+++-+|+.+|-++.
T Consensus 189 ~~~--~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~ 236 (377)
T COG4782 189 PVK--RIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDV 236 (377)
T ss_pred CCc--eEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCCh
Confidence 665 9999999999999999887763222 35678889998886654
|
|
| >KOG2112 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0082 Score=55.02 Aligned_cols=58 Identities=22% Similarity=0.299 Sum_probs=40.3
Q ss_pred CccEEEEecCCCCcCCHHHHHHHHHhCCCCc--eeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 394 NIPILAIAGDQDLICPPEAVEETVKLLPEDL--VTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 394 ~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~--~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
..|++..||+.|.++|..-.+...+.+.... ++++.+ ++.+|+.-.+ + ...+..|+.+
T Consensus 144 ~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y--~g~~h~~~~~---------e-~~~~~~~~~~ 203 (206)
T KOG2112|consen 144 YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPY--PGLGHSTSPQ---------E-LDDLKSWIKT 203 (206)
T ss_pred cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeec--CCccccccHH---------H-HHHHHHHHHH
Confidence 7999999999999999987776666655433 344444 7777766543 2 3566777765
|
|
| >COG2936 Predicted acyl esterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0042 Score=65.49 Aligned_cols=85 Identities=18% Similarity=0.116 Sum_probs=67.7
Q ss_pred hcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHH
Q 012210 182 EEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAM 261 (468)
Q Consensus 182 ~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~ 261 (468)
.+||.|+..|+.|.+.. .|.....+ + .+ + +|-...|++|..+.-++ ++|..+|.|++|...+.+
T Consensus 78 a~GYavV~qDvRG~~~S----------eG~~~~~~--~-~E-~-~Dg~D~I~Wia~QpWsN-G~Vgm~G~SY~g~tq~~~ 141 (563)
T COG2936 78 AQGYAVVNQDVRGRGGS----------EGVFDPES--S-RE-A-EDGYDTIEWLAKQPWSN-GNVGMLGLSYLGFTQLAA 141 (563)
T ss_pred cCceEEEEecccccccC----------Ccccceec--c-cc-c-cchhHHHHHHHhCCccC-CeeeeecccHHHHHHHHH
Confidence 89999999999998663 12222111 2 23 2 88889999999988776 899999999999999999
Q ss_pred HHhcCCCCCcccccceeEEccccccC
Q 012210 262 LSRCGFEGRESRLAAIVTLASSLDYT 287 (468)
Q Consensus 262 a~~~~~~~~p~~V~~lVllap~~~~~ 287 (468)
|+.. |+.+++++...+..+..
T Consensus 142 Aa~~-----pPaLkai~p~~~~~D~y 162 (563)
T COG2936 142 AALQ-----PPALKAIAPTEGLVDRY 162 (563)
T ss_pred HhcC-----Cchheeecccccccccc
Confidence 9886 89999999988877743
|
|
| >KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0045 Score=64.58 Aligned_cols=72 Identities=19% Similarity=0.317 Sum_probs=50.6
Q ss_pred ccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCccccc---ccccchhhHHHHHHHHHhh
Q 012210 389 HIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLV---GGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 389 ~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~---~~~~~pe~v~~~I~~FL~~ 463 (468)
.+-.++.|+|++.|..|..|+++..+++.+++.. ..+++++ .+++|..-..-- .-....+.|...+.+||.+
T Consensus 299 ~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA-~~elhVI--~~adhsmaipk~k~esegltqseVd~~i~~aI~e 373 (784)
T KOG3253|consen 299 ALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQA-EVELHVI--GGADHSMAIPKRKVESEGLTQSEVDSAIAQAIKE 373 (784)
T ss_pred hhHhcCCceEEEecCCcccCCHHHHHHHHHHhhc-cceEEEe--cCCCccccCCccccccccccHHHHHHHHHHHHHH
Confidence 4556799999999999999999999999999885 5678888 677776543210 0011345565666666554
|
|
| >KOG3101 consensus Esterase D [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0013 Score=60.07 Aligned_cols=97 Identities=15% Similarity=0.194 Sum_probs=58.9
Q ss_pred hcCceEeccCccccccCCccchHHHhh---cccceEe------ecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEe
Q 012210 182 EEGQLSVSPQLFDLQERLFSTIDDFQK---QLDLIVQ------YDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHS 252 (468)
Q Consensus 182 ~~Gy~viapdl~~~~~~~~~~~~~l~~---~~~~~~~------~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS 252 (468)
++|..|++||---++-.-.+..+.+.- .|+-+.. -.|.+-+|+.+.+...+.- ...+.+..++.+.|||
T Consensus 72 ~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdYv~kELp~~l~~--~~~pld~~k~~IfGHS 149 (283)
T KOG3101|consen 72 KHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDYVVKELPQLLNS--ANVPLDPLKVGIFGHS 149 (283)
T ss_pred hcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHHHHHHHHHHhcc--ccccccchhcceeccc
Confidence 799999999986655433333332211 1221111 1134555665666655553 2223334589999999
Q ss_pred hhHHHHHHHHHhcCCCCCcccccceeEEccccc
Q 012210 253 MGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 253 ~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
|||.=|+..+.+. +.+.+++-.++|...
T Consensus 150 MGGhGAl~~~Lkn-----~~kykSvSAFAPI~N 177 (283)
T KOG3101|consen 150 MGGHGALTIYLKN-----PSKYKSVSAFAPICN 177 (283)
T ss_pred cCCCceEEEEEcC-----cccccceeccccccC
Confidence 9999988877765 778888777776443
|
|
| >PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0021 Score=61.10 Aligned_cols=109 Identities=17% Similarity=0.220 Sum_probs=65.3
Q ss_pred ccccccchhhHHHHHHhhhhc-Cce--EeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhc
Q 012210 163 SSAIAIQIRDLSQNLVNMIEE-GQL--SVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQS 239 (468)
Q Consensus 163 ~~G~~~~i~~~a~~la~~l~~-Gy~--viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~ 239 (468)
.||.|....+-..+++++... ||. ++. |. |+....-+ +| ..|-.-......++..+++.|....
T Consensus 24 VHGyn~~f~~a~~r~aql~~~~~~~~~~i~---Fs----WPS~g~~~---~Y---~~d~~~a~~s~~~l~~~L~~L~~~~ 90 (233)
T PF05990_consen 24 VHGYNNSFEDALRRAAQLAHDLGFPGVVIL---FS----WPSDGSLL---GY---FYDRESARFSGPALARFLRDLARAP 90 (233)
T ss_pred EeCCCCCHHHHHHHHHHHHHHhCCCceEEE---EE----cCCCCChh---hh---hhhhhhHHHHHHHHHHHHHHHHhcc
Confidence 688888887777776654443 332 232 11 22111100 01 0111122334577888888888775
Q ss_pred CCCCCcEEEEEEehhHHHHHHHHHhcCCCCC----cccccceeEEcccccc
Q 012210 240 KPKDGKLLAIGHSMGGILLYAMLSRCGFEGR----ESRLAAIVTLASSLDY 286 (468)
Q Consensus 240 ~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~----p~~V~~lVllap~~~~ 286 (468)
+.. +|++++||||+.+.+........... ..++..+|+++|-++.
T Consensus 91 ~~~--~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 91 GIK--RIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred CCc--eEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 555 99999999999999988776422221 2367888898886553
|
|
| >PRK04940 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.032 Score=50.55 Aligned_cols=33 Identities=21% Similarity=0.272 Sum_probs=27.7
Q ss_pred cEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccc
Q 012210 245 KLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 245 ~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
++.+||.|+||..|..+|.+| .+ ..|+++|...
T Consensus 61 ~~~liGSSLGGyyA~~La~~~-------g~-~aVLiNPAv~ 93 (180)
T PRK04940 61 RPLICGVGLGGYWAERIGFLC-------GI-RQVIFNPNLF 93 (180)
T ss_pred CcEEEEeChHHHHHHHHHHHH-------CC-CEEEECCCCC
Confidence 789999999999999999987 34 4678888665
|
|
| >PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids [] | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0045 Score=58.15 Aligned_cols=84 Identities=15% Similarity=0.099 Sum_probs=49.2
Q ss_pred ccccc-cccchhhHHHHHHhhhhcCce---EeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 161 RQSSA-IAIQIRDLSQNLVNMIEEGQL---SVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 161 ~~~~G-~~~~i~~~a~~la~~l~~Gy~---viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
|.+.+ -...+..++..|. .+||. +++.+.-.... ..... ... ...+.+ ..+.++|+.++
T Consensus 8 HG~~~~~~~~w~~~~~~l~---~~GY~~~~vya~tyg~~~~-----~~~~~-~~~-------~~~~~~-~~l~~fI~~Vl 70 (219)
T PF01674_consen 8 HGTGGNAYSNWSTLAPYLK---AAGYCDSEVYALTYGSGNG-----SPSVQ-NAH-------MSCESA-KQLRAFIDAVL 70 (219)
T ss_dssp --TTTTTCGGCCHHHHHHH---HTT--CCCEEEE--S-CCH-----HTHHH-HHH-------B-HHHH-HHHHHHHHHHH
T ss_pred CCCCcchhhCHHHHHHHHH---HcCCCcceeEeccCCCCCC-----CCccc-ccc-------cchhhH-HHHHHHHHHHH
Confidence 33444 4456677888888 89998 57744322211 01111 000 112444 78999999999
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHh
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSR 264 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~ 264 (468)
...+. ||-||||||||.++-.+...
T Consensus 71 ~~TGa---kVDIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 71 AYTGA---KVDIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp HHHT-----EEEEEETCHHHHHHHHHHH
T ss_pred HhhCC---EEEEEEcCCcCHHHHHHHHH
Confidence 88775 99999999999999888764
|
This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A .... |
| >PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0037 Score=51.47 Aligned_cols=62 Identities=19% Similarity=0.203 Sum_probs=50.7
Q ss_pred cCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 393 CNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 393 I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
-..|+|++.++.|+++|.+.++.+.+.++++ .++.+ ++.+|..+.. .-.-+.+.+.+||..-
T Consensus 33 ~~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s--~lvt~--~g~gHg~~~~------~s~C~~~~v~~yl~~G 94 (103)
T PF08386_consen 33 GAPPILVLGGTHDPVTPYEGARAMAARLPGS--RLVTV--DGAGHGVYAG------GSPCVDKAVDDYLLDG 94 (103)
T ss_pred CCCCEEEEecCcCCCCcHHHHHHHHHHCCCc--eEEEE--eccCcceecC------CChHHHHHHHHHHHcC
Confidence 3699999999999999999999999999987 77777 7778877742 2255677888888743
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity |
| >KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0033 Score=67.44 Aligned_cols=110 Identities=23% Similarity=0.231 Sum_probs=60.9
Q ss_pred cccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecC----------ChhhHHhhhHH
Q 012210 160 RRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDW----------DFDHYLEEDVP 229 (468)
Q Consensus 160 ~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~----------~~~~~~~~D~~ 229 (468)
.|+|-|---++|.+|-........|+. ....+......+.....|+ ...+.+ +-+.
T Consensus 95 IPGNAGSyKQvRSiAS~a~n~y~~~~~-------------e~t~~~d~~~~~DFFaVDFnEe~tAm~G~~l~dQt-EYV~ 160 (973)
T KOG3724|consen 95 IPGNAGSYKQVRSIASVAQNAYQGGPF-------------EKTEDRDNPFSFDFFAVDFNEEFTAMHGHILLDQT-EYVN 160 (973)
T ss_pred ecCCCCchHHHHHHHHHHhhhhcCCch-------------hhhhcccCccccceEEEcccchhhhhccHhHHHHH-HHHH
Confidence 367888889999988766532223321 0111111111111222222 233333 5566
Q ss_pred HHHHHHHhhcCC-C------CCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccc
Q 012210 230 AAMEYIRAQSKP-K------DGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 230 a~i~~l~~~~~~-~------~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
.+|.++...+.. . ...|++|||||||++|..++..- ...+..|.-++++++|-.
T Consensus 161 dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlk--n~~~~sVntIITlssPH~ 221 (973)
T KOG3724|consen 161 DAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLK--NEVQGSVNTIITLSSPHA 221 (973)
T ss_pred HHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhh--hhccchhhhhhhhcCccc
Confidence 666676554432 1 12499999999999999988761 122456777777776543
|
|
| >KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.015 Score=53.65 Aligned_cols=95 Identities=20% Similarity=0.227 Sum_probs=69.1
Q ss_pred ccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcE
Q 012210 167 AIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKL 246 (468)
Q Consensus 167 ~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v 246 (468)
.++...+++.|- +.+|..+-|.+..+...|. . .+..+-. +|+..+++++...-... +|
T Consensus 52 ~~y~~~L~~~ld---e~~wslVq~q~~Ssy~G~G------------t----~slk~D~-edl~~l~~Hi~~~~fSt--~v 109 (299)
T KOG4840|consen 52 CLYTTMLNRYLD---ENSWSLVQPQLRSSYNGYG------------T----FSLKDDV-EDLKCLLEHIQLCGFST--DV 109 (299)
T ss_pred cccHHHHHHHHh---hccceeeeeeccccccccc------------c----ccccccH-HHHHHHHHHhhccCccc--ce
Confidence 467788888777 8999988877766533222 1 1233334 89999999887654443 89
Q ss_pred EEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcccccc
Q 012210 247 LAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 286 (468)
Q Consensus 247 ~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~ 286 (468)
+++|||.|+.=.+.|... ...+..|++.|+.+|..+.
T Consensus 110 VL~GhSTGcQdi~yYlTn---t~~~r~iraaIlqApVSDr 146 (299)
T KOG4840|consen 110 VLVGHSTGCQDIMYYLTN---TTKDRKIRAAILQAPVSDR 146 (299)
T ss_pred EEEecCccchHHHHHHHh---ccchHHHHHHHHhCccchh
Confidence 999999999999988843 2237789999999987764
|
|
| >COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.0051 Score=59.11 Aligned_cols=59 Identities=17% Similarity=0.287 Sum_probs=42.3
Q ss_pred ChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccc
Q 012210 219 DFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 219 ~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
++++++ +. .++.|+..-+. ++++++|||+||.+|+.+|.+.. .....|..+++++++..
T Consensus 46 ~l~~~a-~~---yv~~Ir~~QP~--GPy~L~G~S~GG~vA~evA~qL~--~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 46 SLDDMA-AA---YVAAIRRVQPE--GPYVLLGWSLGGAVAFEVAAQLE--AQGEEVAFLGLLDAVPP 104 (257)
T ss_pred CHHHHH-HH---HHHHHHHhCCC--CCEEEEeeccccHHHHHHHHHHH--hCCCeEEEEEEeccCCC
Confidence 455555 44 44444444333 59999999999999999999862 22457999999988766
|
|
| >cd00741 Lipase Lipase | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.0055 Score=54.10 Aligned_cols=57 Identities=25% Similarity=0.163 Sum_probs=39.1
Q ss_pred hhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccc
Q 012210 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
..+...++......+.. +++++|||+||.+|..++..+.... +..+..++.++++..
T Consensus 12 ~~i~~~~~~~~~~~p~~--~i~v~GHSlGg~lA~l~a~~~~~~~-~~~~~~~~~fg~p~~ 68 (153)
T cd00741 12 NLVLPLLKSALAQYPDY--KIHVTGHSLGGALAGLAGLDLRGRG-LGRLVRVYTFGPPRV 68 (153)
T ss_pred HHHHHHHHHHHHHCCCC--eEEEEEcCHHHHHHHHHHHHHHhcc-CCCceEEEEeCCCcc
Confidence 55566666655544444 9999999999999999998862110 135667788777654
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >smart00824 PKS_TE Thioesterase | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.051 Score=49.48 Aligned_cols=87 Identities=22% Similarity=0.203 Sum_probs=51.6
Q ss_pred hhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEE
Q 012210 170 IRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAI 249 (468)
Q Consensus 170 i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lv 249 (468)
...++..+. ..+.+++.++.+++.. .. ...+.+.+. .+ .++.+....+. .+++++
T Consensus 15 ~~~~~~~l~----~~~~v~~~~~~g~~~~------------~~---~~~~~~~~~-~~---~~~~l~~~~~~--~~~~l~ 69 (212)
T smart00824 15 YARLAAALR----GRRDVSALPLPGFGPG------------EP---LPASADALV-EA---QAEAVLRAAGG--RPFVLV 69 (212)
T ss_pred HHHHHHhcC----CCccEEEecCCCCCCC------------CC---CCCCHHHHH-HH---HHHHHHHhcCC--CCeEEE
Confidence 445555554 5788898888776331 00 001233333 22 23333333322 389999
Q ss_pred EEehhHHHHHHHHHhcCCCCCcccccceeEEccc
Q 012210 250 GHSMGGILLYAMLSRCGFEGRESRLAAIVTLASS 283 (468)
Q Consensus 250 GhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~ 283 (468)
|||+||.++..++..+. .....+.+++++.+.
T Consensus 70 g~s~Gg~~a~~~a~~l~--~~~~~~~~l~~~~~~ 101 (212)
T smart00824 70 GHSSGGLLAHAVAARLE--ARGIPPAAVVLLDTY 101 (212)
T ss_pred EECHHHHHHHHHHHHHH--hCCCCCcEEEEEccC
Confidence 99999999999998752 113468888887653
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. |
| >PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3 | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.0061 Score=61.08 Aligned_cols=61 Identities=13% Similarity=0.151 Sum_probs=42.7
Q ss_pred hhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCc
Q 012210 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSS 289 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~ 289 (468)
..+..+|..|....+...+++++||||+|+.||-..+..+. . ..+|..++.++|+.+....
T Consensus 132 ~~la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~--~-~~ki~rItgLDPAgP~F~~ 192 (331)
T PF00151_consen 132 RQLAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLK--G-GGKIGRITGLDPAGPLFEN 192 (331)
T ss_dssp HHHHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTT--T----SSEEEEES-B-TTTTT
T ss_pred HHHHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhcc--C-cceeeEEEecCcccccccC
Confidence 66777788887666666679999999999999999888761 1 2489999999997766443
|
1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A .... |
| >PF07167 PhaC_N: Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus; InterPro: IPR010941 This entry represents the central domain of the bacterial poly-beta-hydroxybutyrate polymerase (PhaC) | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.0038 Score=55.58 Aligned_cols=67 Identities=16% Similarity=0.313 Sum_probs=58.9
Q ss_pred cccccccccccccchhhHHHHH-------HHHHHHHHhhhhcchhhhhhhhhh--hhhHhhhhcc---ccCchhhhhhHH
Q 012210 82 KKEDDLTRLATVWDESKLVTKL-------TETFMSLSERLSGFLSENQSKIMS--AKLFDQISKL---LEDSQLSEGFNE 149 (468)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~---~~~~~~~~~~~~ 149 (468)
|.|+||.+. .|.+++++..+ ++.++++.+.+.|.....+.+..| .++.|+++++ +.+|.+..+..+
T Consensus 1 ~~D~RF~~~--~W~~~P~f~~~~q~yL~~~~~~~~~~~~~~gld~~~~~r~~F~~rq~~da~sPsNf~~tNP~~l~~~~e 78 (172)
T PF07167_consen 1 KKDRRFADP--AWQENPFFRFLKQSYLLNSRWWHDLVDEVEGLDPHHRRRLRFFTRQWLDALSPSNFLLTNPEVLRRTIE 78 (172)
T ss_pred CCCCCCCch--hhhhCHHHHHHHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHcCCccccccCHHHHHHHHh
Confidence 689999998 89999999888 677889999999999999999877 9999999999 889998666644
Q ss_pred h
Q 012210 150 I 150 (468)
Q Consensus 150 ~ 150 (468)
-
T Consensus 79 t 79 (172)
T PF07167_consen 79 T 79 (172)
T ss_pred C
Confidence 4
|
Polyhydroxyalkanoic acids (PHAs) are carbon and energy reserve polymers produced in some bacteria when carbon sources are plentiful and another nutrient, such as nitrogen, phosphate, oxygen, or sulphur, becomes limiting. PHAs composed of monomeric units ranging from 3 to 14 carbons exist in nature. When the carbon source is exhausted, PHA is utilised by the bacterium. PhaC links D-(-)-3-hydroxybutyrl-CoA to an existing PHA molecule by the formation of an ester bond [].; GO: 0016746 transferase activity, transferring acyl groups, 0042619 poly-hydroxybutyrate biosynthetic process |
| >COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.0074 Score=63.27 Aligned_cols=197 Identities=20% Similarity=0.149 Sum_probs=113.3
Q ss_pred hhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHH
Q 012210 181 IEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYA 260 (468)
Q Consensus 181 l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~ 260 (468)
|+.|..-+...+.|.+. .-+.|-+++.... .... .+|+.++.+.|..+--...+++.+-|-|-||.++-.
T Consensus 447 LerGg~~v~ANIRGGGE----fGp~WH~Aa~k~n-----rq~v-fdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~ 516 (648)
T COG1505 447 LERGGVFVLANIRGGGE----FGPEWHQAGMKEN-----KQNV-FDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGA 516 (648)
T ss_pred HhcCCeEEEEecccCCc----cCHHHHHHHhhhc-----chhh-hHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEe
Confidence 47887777668888655 2233332322211 2233 399999999998874434468999999999999887
Q ss_pred HHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCchhHHHHHHHhhhc
Q 012210 261 MLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISA 340 (468)
Q Consensus 261 ~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 340 (468)
...+. |+.+.++|.-.|..++..- ..+..+. +|+..+-..
T Consensus 517 alTQr-----PelfgA~v~evPllDMlRY-------------------h~l~aG~----------------sW~~EYG~P 556 (648)
T COG1505 517 ALTQR-----PELFGAAVCEVPLLDMLRY-------------------HLLTAGS----------------SWIAEYGNP 556 (648)
T ss_pred eeccC-----hhhhCceeeccchhhhhhh-------------------cccccch----------------hhHhhcCCC
Confidence 77664 7777777765565543221 1111121 333332111
Q ss_pred cccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccC--ccCccEEEEecCCCCcCCHHHHHHHHH
Q 012210 341 EDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIH--KCNIPILAIAGDQDLICPPEAVEETVK 418 (468)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~I~vPvLiI~G~~D~ivp~~~~~~l~~ 418 (468)
.+|+....+. .+. ....++ +.=.|+||-.+..|.-|.|..+.+++.
T Consensus 557 ---d~P~d~~~l~-----------------~YS------------Py~nl~~g~kYP~~LITTs~~DDRVHPaHarKfaa 604 (648)
T COG1505 557 ---DDPEDRAFLL-----------------AYS------------PYHNLKPGQKYPPTLITTSLHDDRVHPAHARKFAA 604 (648)
T ss_pred ---CCHHHHHHHH-----------------hcC------------chhcCCccccCCCeEEEcccccccccchHHHHHHH
Confidence 1233222111 000 001111 122699999999999999999999988
Q ss_pred hCCCCceeEEEecCCCCCCCCcccccccccch-hhHHHHHHHHHhhc
Q 012210 419 LLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAV-EQVYPCIVQFLGRY 464 (468)
Q Consensus 419 ~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~p-e~v~~~I~~FL~~~ 464 (468)
.+.........+..-++||.+--+ .++ ..-...+..||.+.
T Consensus 605 ~L~e~~~pv~~~e~t~gGH~g~~~-----~~~~A~~~a~~~afl~r~ 646 (648)
T COG1505 605 KLQEVGAPVLLREETKGGHGGAAP-----TAEIARELADLLAFLLRT 646 (648)
T ss_pred HHHhcCCceEEEeecCCcccCCCC-----hHHHHHHHHHHHHHHHHh
Confidence 876554333333335678877765 111 23345566677654
|
|
| >PTZ00472 serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.11 Score=54.61 Aligned_cols=63 Identities=19% Similarity=0.205 Sum_probs=49.2
Q ss_pred CccEEEEecCCCCcCCHHHHHHHHHhCCC------------------C---------------ceeEEEecCCCCCCCCc
Q 012210 394 NIPILAIAGDQDLICPPEAVEETVKLLPE------------------D---------------LVTYKVFGEPSGPHYAH 440 (468)
Q Consensus 394 ~vPvLiI~G~~D~ivp~~~~~~l~~~ip~------------------~---------------~~~~~v~~~~~agH~~H 440 (468)
.++||+..|+.|.+|+.-..+++.+.++- . ...++.+ .++||+.+
T Consensus 364 gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V--~~AGH~vp 441 (462)
T PTZ00472 364 GVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQV--YNAGHMVP 441 (462)
T ss_pred CceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEE--CCCCccCh
Confidence 48999999999999999887777766541 0 1122233 68999999
Q ss_pred ccccccccchhhHHHHHHHHHhhc
Q 012210 441 YDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 441 ~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
.+ +|+.+.+.|..|+...
T Consensus 442 ~d------~P~~~~~~i~~fl~~~ 459 (462)
T PTZ00472 442 MD------QPAVALTMINRFLRNR 459 (462)
T ss_pred hh------HHHHHHHHHHHHHcCC
Confidence 98 9999999999999753
|
|
| >KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.0034 Score=64.10 Aligned_cols=63 Identities=22% Similarity=0.327 Sum_probs=47.6
Q ss_pred hhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCC---CCCcccccceeEEcccccc
Q 012210 221 DHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGF---EGRESRLAAIVTLASSLDY 286 (468)
Q Consensus 221 ~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~---~~~p~~V~~lVllap~~~~ 286 (468)
++|. ..+...|+..-...+.+ |++||+|||||.+.+.+...++. ...+..|++++.+++++--
T Consensus 162 d~yl-~kLK~~iE~~~~~~G~k--kVvlisHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~p~lG 227 (473)
T KOG2369|consen 162 DQYL-SKLKKKIETMYKLNGGK--KVVLISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGAPWLG 227 (473)
T ss_pred HHHH-HHHHHHHHHHHHHcCCC--ceEEEecCCccHHHHHHHhcccccchhHHHHHHHHHHccCchhcC
Confidence 4565 77888888877776654 99999999999999999988733 1224568888888776653
|
|
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.061 Score=57.29 Aligned_cols=121 Identities=18% Similarity=0.202 Sum_probs=73.7
Q ss_pred hhhccccccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHH
Q 012210 150 IRGKLSSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVP 229 (468)
Q Consensus 150 ~~~~~~~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~ 229 (468)
+.+..+-||-.-+.=|++..-.--..+| +++..||.--...+.|.+. .-..|-+.|....+. .. ..|++
T Consensus 444 ~~g~~p~lLygYGaYG~s~~p~Fs~~~l-SLlDRGfiyAIAHVRGGge----lG~~WYe~GK~l~K~----NT--f~DFI 512 (682)
T COG1770 444 LDGSAPLLLYGYGAYGISMDPSFSIARL-SLLDRGFVYAIAHVRGGGE----LGRAWYEDGKLLNKK----NT--FTDFI 512 (682)
T ss_pred CCCCCcEEEEEeccccccCCcCccccee-eeecCceEEEEEEeecccc----cChHHHHhhhhhhcc----cc--HHHHH
Confidence 3444444554444555542222112223 4568888654434444332 222222233322222 12 38999
Q ss_pred HHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcccccc
Q 012210 230 AAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 286 (468)
Q Consensus 230 a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~ 286 (468)
++.++|...--...+.++++|-|.||+++...+..- |+.++++|+-.|..+.
T Consensus 513 a~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~-----P~lf~~iiA~VPFVDv 564 (682)
T COG1770 513 AAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMA-----PDLFAGIIAQVPFVDV 564 (682)
T ss_pred HHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhC-----hhhhhheeecCCccch
Confidence 999999887555556899999999999999988763 8889999988887664
|
|
| >PLN02517 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.0085 Score=63.25 Aligned_cols=88 Identities=20% Similarity=0.326 Sum_probs=60.0
Q ss_pred hhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCC--------hhhHHhhhHHHHHHHHHhhcCCC
Q 012210 171 RDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWD--------FDHYLEEDVPAAMEYIRAQSKPK 242 (468)
Q Consensus 171 ~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~--------~~~~~~~D~~a~i~~l~~~~~~~ 242 (468)
..+.+.|+ ..||. .-++++- .|||+ .++|. ..+...|+.+....+.+
T Consensus 159 ~kLIe~L~---~iGY~--~~nL~gA-------------------PYDWRls~~~le~rd~YF-~rLK~lIE~ay~~nggk 213 (642)
T PLN02517 159 AVLIANLA---RIGYE--EKNMYMA-------------------AYDWRLSFQNTEVRDQTL-SRLKSNIELMVATNGGK 213 (642)
T ss_pred HHHHHHHH---HcCCC--CCceeec-------------------ccccccCccchhhhhHHH-HHHHHHHHHHHHHcCCC
Confidence 67777787 88885 3455443 23332 24565 77888888876664433
Q ss_pred CCcEEEEEEehhHHHHHHHHHhcC----------CCCCcccccceeEEccccc
Q 012210 243 DGKLLAIGHSMGGILLYAMLSRCG----------FEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 243 ~~~v~lvGhS~GG~ia~~~a~~~~----------~~~~p~~V~~lVllap~~~ 285 (468)
||+|+||||||.+++.+..... ..-....|++.|.+++++.
T Consensus 214 --KVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~l 264 (642)
T PLN02517 214 --KVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFL 264 (642)
T ss_pred --eEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheecccccC
Confidence 9999999999999999876421 0012456899999988654
|
|
| >COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.023 Score=54.84 Aligned_cols=114 Identities=16% Similarity=0.076 Sum_probs=73.9
Q ss_pred ccccccccccccchhhHH--HHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLS--QNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEY 234 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a--~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~ 234 (468)
++.-|.-.|-....+... ++||+ .+||.|+.||-++. .|....... -+.....--..++. ..+.+++..
T Consensus 64 vv~LHG~~~sgag~~~~sg~d~lAd--~~gFlV~yPdg~~~--~wn~~~~~~---~~~p~~~~~g~ddV--gflr~lva~ 134 (312)
T COG3509 64 VVVLHGSGGSGAGQLHGTGWDALAD--REGFLVAYPDGYDR--AWNANGCGN---WFGPADRRRGVDDV--GFLRALVAK 134 (312)
T ss_pred EEEEecCCCChHHhhcccchhhhhc--ccCcEEECcCcccc--ccCCCcccc---cCCcccccCCccHH--HHHHHHHHH
Confidence 444333334444444444 55652 68999999966553 221111000 00000000023343 788999999
Q ss_pred HHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcccc
Q 012210 235 IRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSL 284 (468)
Q Consensus 235 l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~ 284 (468)
|..+++++..+|++.|.|-||.++..++..+ |+.+.++.++++..
T Consensus 135 l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~-----p~~faa~A~VAg~~ 179 (312)
T COG3509 135 LVNEYGIDPARVYVTGLSNGGRMANRLACEY-----PDIFAAIAPVAGLL 179 (312)
T ss_pred HHHhcCcCcceEEEEeeCcHHHHHHHHHhcC-----cccccceeeeeccc
Confidence 9999999888999999999999999999987 88888888887755
|
|
| >PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.2 Score=49.76 Aligned_cols=54 Identities=19% Similarity=0.220 Sum_probs=42.2
Q ss_pred hhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccc
Q 012210 225 EEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 225 ~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
..-+.+++.++..+.+. +++||||..|+.++..|.+..+ .+.+.++|+|++..+
T Consensus 177 ~ari~Aa~~~~~~~~~~---~ivlIg~G~gA~~~~~~la~~~----~~~~daLV~I~a~~p 230 (310)
T PF12048_consen 177 FARIEAAIAFAQQQGGK---NIVLIGHGTGAGWAARYLAEKP----PPMPDALVLINAYWP 230 (310)
T ss_pred HHHHHHHHHHHHhcCCc---eEEEEEeChhHHHHHHHHhcCC----CcccCeEEEEeCCCC
Confidence 36777788877776432 5999999999999999998741 456899999988543
|
This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes. |
| >PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.011 Score=56.56 Aligned_cols=53 Identities=25% Similarity=0.382 Sum_probs=42.2
Q ss_pred HHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcccccc
Q 012210 229 PAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 286 (468)
Q Consensus 229 ~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~ 286 (468)
.+++.+|..+.+....+..++|+||||..|+.++.+| |+.+.+++.++|....
T Consensus 100 ~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~-----Pd~F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 100 EELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRH-----PDLFGAVIAFSGALDP 152 (251)
T ss_dssp THHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHS-----TTTESEEEEESEESET
T ss_pred ccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhC-----ccccccccccCccccc
Confidence 3555666666665433479999999999999999998 9999999999986553
|
; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D .... |
| >PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.047 Score=51.73 Aligned_cols=93 Identities=18% Similarity=0.186 Sum_probs=57.1
Q ss_pred cccccccch--hhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhc
Q 012210 162 QSSAIAIQI--RDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQS 239 (468)
Q Consensus 162 ~~~G~~~~i--~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~ 239 (468)
.+.|-.+++ +.+-++|+ .+||.|+|--+ ..+.+++. ...-+...+..+++.+....
T Consensus 26 af~ga~P~itYr~lLe~La---~~Gy~ViAtPy-------~~tfDH~~------------~A~~~~~~f~~~~~~L~~~~ 83 (250)
T PF07082_consen 26 AFVGAAPQITYRYLLERLA---DRGYAVIATPY-------VVTFDHQA------------IAREVWERFERCLRALQKRG 83 (250)
T ss_pred ceeccCcHHHHHHHHHHHH---hCCcEEEEEec-------CCCCcHHH------------HHHHHHHHHHHHHHHHHHhc
Confidence 456667776 67888888 99999997222 11111111 11111245566667776654
Q ss_pred CCC--CCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEc
Q 012210 240 KPK--DGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLA 281 (468)
Q Consensus 240 ~~~--~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVlla 281 (468)
+.. .-+++-+|||+|+-+-+.+.+.+ +..-++-|+++
T Consensus 84 ~~~~~~lP~~~vGHSlGcklhlLi~s~~-----~~~r~gniliS 122 (250)
T PF07082_consen 84 GLDPAYLPVYGVGHSLGCKLHLLIGSLF-----DVERAGNILIS 122 (250)
T ss_pred CCCcccCCeeeeecccchHHHHHHhhhc-----cCcccceEEEe
Confidence 322 13678899999999999988876 33445666654
|
Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis. |
| >PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides [] | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.022 Score=49.06 Aligned_cols=38 Identities=18% Similarity=0.294 Sum_probs=29.3
Q ss_pred hhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhc
Q 012210 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRC 265 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~ 265 (468)
+.+...++.+....+. .++.+.|||+||.+|..++..+
T Consensus 48 ~~~~~~l~~~~~~~~~--~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 48 DQILDALKELVEKYPD--YSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHHSTT--SEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccC--ccchhhccchHHHHHHHHHHhh
Confidence 5555666666666553 3899999999999999998875
|
Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A .... |
| >PLN02633 palmitoyl protein thioesterase family protein | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.15 Score=49.96 Aligned_cols=36 Identities=17% Similarity=0.345 Sum_probs=31.0
Q ss_pred cEEEEEEehhHHHHHHHHHhcCCCCCc-ccccceeEEcccc
Q 012210 245 KLLAIGHSMGGILLYAMLSRCGFEGRE-SRLAAIVTLASSL 284 (468)
Q Consensus 245 ~v~lvGhS~GG~ia~~~a~~~~~~~~p-~~V~~lVllap~~ 284 (468)
=+++||||+||.++-.++.+|+ . +.|+.+|.++++-
T Consensus 95 G~naIGfSQGGlflRa~ierc~----~~p~V~nlISlggph 131 (314)
T PLN02633 95 GYNIVGRSQGNLVARGLIEFCD----GGPPVYNYISLAGPH 131 (314)
T ss_pred cEEEEEEccchHHHHHHHHHCC----CCCCcceEEEecCCC
Confidence 4899999999999999999982 2 4799999998754
|
|
| >PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.31 Score=45.48 Aligned_cols=38 Identities=32% Similarity=0.469 Sum_probs=27.9
Q ss_pred EEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCccc
Q 012210 398 LAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYD 442 (468)
Q Consensus 398 LiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e 442 (468)
.++.|++|.|.|++..+..-+.. . .+..+ +++|+....
T Consensus 169 ~aiIg~~D~IFpp~nQ~~~W~~~--~--~~~~~---~~~Hy~F~~ 206 (213)
T PF04301_consen 169 KAIIGKKDRIFPPENQKRAWQGR--C--TIVEI---DAPHYPFFH 206 (213)
T ss_pred EEEEcCCCEEeCHHHHHHHHhCc--C--cEEEe---cCCCcCchh
Confidence 48899999999999888777643 2 34444 578887653
|
|
| >KOG1551 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.089 Score=49.95 Aligned_cols=61 Identities=25% Similarity=0.337 Sum_probs=46.7
Q ss_pred EEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccCC
Q 012210 397 ILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDSV 467 (468)
Q Consensus 397 vLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~~ 467 (468)
+.++.+++|..+|...+..+++..|++.+++.. +||..-+-+ ..+.+-+.|.+-|++.+..
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg~eVr~~e-----gGHVsayl~-----k~dlfRR~I~d~L~R~~ke 369 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPGCEVRYLE-----GGHVSAYLF-----KQDLFRRAIVDGLDRLDKE 369 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCCCEEEEee-----cCceeeeeh-----hchHHHHHHHHHHHhhhhc
Confidence 567889999999999999999999999554443 577554421 4577888999999887654
|
|
| >PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.46 Score=47.16 Aligned_cols=45 Identities=27% Similarity=0.516 Sum_probs=36.1
Q ss_pred ChhhHHhhhHHHHHHHHHhhc-CCCCCcEEEEEEehhHHHHHHHHHh
Q 012210 219 DFDHYLEEDVPAAMEYIRAQS-KPKDGKLLAIGHSMGGILLYAMLSR 264 (468)
Q Consensus 219 ~~~~~~~~D~~a~i~~l~~~~-~~~~~~v~lvGhS~GG~ia~~~a~~ 264 (468)
+.++++ .|..+.++||+++. +.+...+.+.|||+||.++...+..
T Consensus 190 s~~dLv-~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~ 235 (365)
T PF05677_consen 190 SRKDLV-KDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKK 235 (365)
T ss_pred CHHHHH-HHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHh
Confidence 346776 99999999998754 4444589999999999999886655
|
|
| >PRK10439 enterobactin/ferric enterobactin esterase; Provisional | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.066 Score=55.38 Aligned_cols=50 Identities=16% Similarity=0.272 Sum_probs=38.6
Q ss_pred HHHHHHHhhcCC--CCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcccc
Q 012210 230 AAMEYIRAQSKP--KDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSL 284 (468)
Q Consensus 230 a~i~~l~~~~~~--~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~ 284 (468)
+++-++..+++. +..+.+|+|+||||..++.++.+| |+.+.+++.+++.+
T Consensus 272 eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~-----Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 272 ELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHW-----PERFGCVLSQSGSF 323 (411)
T ss_pred HHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhC-----cccccEEEEeccce
Confidence 344445444433 234789999999999999999998 99999999998864
|
|
| >KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.63 Score=46.52 Aligned_cols=94 Identities=12% Similarity=0.056 Sum_probs=67.0
Q ss_pred ccccccchhhHHHHHHhhhhc---C------ceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHH
Q 012210 163 SSAIAIQIRDLSQNLVNMIEE---G------QLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAME 233 (468)
Q Consensus 163 ~~G~~~~i~~~a~~la~~l~~---G------y~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~ 233 (468)
.||....++++-+.+.-+... | |-||||.+.|.+ |..... +.|+. ......+++
T Consensus 158 ~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGyg--wSd~~s---k~GFn------------~~a~Arvmr 220 (469)
T KOG2565|consen 158 LHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYG--WSDAPS---KTGFN------------AAATARVMR 220 (469)
T ss_pred ecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcc--cCcCCc---cCCcc------------HHHHHHHHH
Confidence 788888888876654311122 3 789999998874 221111 22222 134566788
Q ss_pred HHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEE
Q 012210 234 YIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTL 280 (468)
Q Consensus 234 ~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVll 280 (468)
.|..+.+.+ +..+-|-.||..|+..+|..| |++|.++-+-
T Consensus 221 kLMlRLg~n--kffiqGgDwGSiI~snlasLy-----PenV~GlHln 260 (469)
T KOG2565|consen 221 KLMLRLGYN--KFFIQGGDWGSIIGSNLASLY-----PENVLGLHLN 260 (469)
T ss_pred HHHHHhCcc--eeEeecCchHHHHHHHHHhhc-----chhhhHhhhc
Confidence 888888887 999999999999999999999 9999887654
|
|
| >cd00519 Lipase_3 Lipase (class 3) | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.038 Score=52.23 Aligned_cols=38 Identities=24% Similarity=0.308 Sum_probs=28.4
Q ss_pred hhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhc
Q 012210 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRC 265 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~ 265 (468)
.++...+..++.+.+.. ++.+.|||+||.+|..++...
T Consensus 112 ~~~~~~~~~~~~~~p~~--~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 112 NQVLPELKSALKQYPDY--KIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred HHHHHHHHHHHhhCCCc--eEEEEccCHHHHHHHHHHHHH
Confidence 55556666555554433 899999999999999988865
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.035 Score=52.44 Aligned_cols=56 Identities=23% Similarity=0.421 Sum_probs=37.8
Q ss_pred HHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccc
Q 012210 229 PAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 229 ~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
..+++|++.......+++.+.|||.||.+|...+..+. ....++|.+++..++|.-
T Consensus 69 ~~A~~yl~~~~~~~~~~i~v~GHSkGGnLA~yaa~~~~-~~~~~rI~~vy~fDgPGf 124 (224)
T PF11187_consen 69 KSALAYLKKIAKKYPGKIYVTGHSKGGNLAQYAAANCD-DEIQDRISKVYSFDGPGF 124 (224)
T ss_pred HHHHHHHHHHHHhCCCCEEEEEechhhHHHHHHHHHcc-HHHhhheeEEEEeeCCCC
Confidence 34555555443323347999999999999999988741 111357888888877643
|
|
| >KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.039 Score=54.13 Aligned_cols=51 Identities=18% Similarity=0.221 Sum_probs=42.0
Q ss_pred hhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcc
Q 012210 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLAS 282 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap 282 (468)
.-+.+++++....++...+.|++.|+|.||.-+...|..| +.|+++|+-++
T Consensus 293 nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~Y------PdVkavvLDAt 343 (517)
T KOG1553|consen 293 NAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNY------PDVKAVVLDAT 343 (517)
T ss_pred HHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcC------CCceEEEeecc
Confidence 4556777887777777777999999999999999999885 56999998655
|
|
| >PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase | Back alignment and domain information |
|---|
Probab=94.95 E-value=0.027 Score=51.19 Aligned_cols=101 Identities=25% Similarity=0.406 Sum_probs=66.9
Q ss_pred cCCCcHHHHHHHHHHH-hcCcccccCCcccc---ccccCccC-ccEEEEecCCCCcCCHHHHHHHHHh---CCCCceeEE
Q 012210 357 FCTIPAKLILQLTTAF-REGGLRDRGGKFFY---KDHIHKCN-IPILAIAGDQDLICPPEAVEETVKL---LPEDLVTYK 428 (468)
Q Consensus 357 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~l~~I~-vPvLiI~G~~D~ivp~~~~~~l~~~---ip~~~~~~~ 428 (468)
....++..+++.++.+ .+..+. .+.+.+ .-+...|+ +++|-|-|+.|.|+.+.+....... +|...+..+
T Consensus 94 vmDl~AefyL~Ti~~VFq~~~L~--~G~~~~~Gr~Vdp~aI~~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~ 171 (202)
T PF06850_consen 94 VMDLPAEFYLDTIRRVFQEHLLP--RGTWTVRGRPVDPAAIRRTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHH 171 (202)
T ss_pred HccCcHHHHHHHHHHHHHhCccc--CCceEECCEEcchHHcccceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhc
Confidence 3577888887777653 222221 122222 12455664 7788899999999999876666555 454445555
Q ss_pred EecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 429 VFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 429 v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
+. +++ +|++++.|+.-.+++++.|.+|+.+|
T Consensus 172 ~~--~g~---GHYGlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 172 LQ--PGV---GHYGLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred cc--CCC---CeeecccchhhhhhhhHHHHHHHHhC
Confidence 54 444 55555678888999999999999875
|
This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid. |
| >PLN02606 palmitoyl-protein thioesterase | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.18 Score=49.40 Aligned_cols=54 Identities=15% Similarity=0.257 Sum_probs=38.1
Q ss_pred hhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCc-ccccceeEEcccc
Q 012210 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRE-SRLAAIVTLASSL 284 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p-~~V~~lVllap~~ 284 (468)
+.+..+.+.|+...... .=+++||||+||.++-.++.+|+ . +.|+.+|.++++-
T Consensus 78 ~Qv~~vce~l~~~~~L~-~G~naIGfSQGglflRa~ierc~----~~p~V~nlISlggph 132 (306)
T PLN02606 78 QQASIACEKIKQMKELS-EGYNIVAESQGNLVARGLIEFCD----NAPPVINYVSLGGPH 132 (306)
T ss_pred HHHHHHHHHHhcchhhc-CceEEEEEcchhHHHHHHHHHCC----CCCCcceEEEecCCc
Confidence 34444444444422222 24899999999999999999982 2 4699999998754
|
|
| >COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.67 E-value=0.063 Score=54.02 Aligned_cols=57 Identities=35% Similarity=0.424 Sum_probs=41.9
Q ss_pred hhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccC
Q 012210 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYT 287 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~ 287 (468)
+-+.+.++.+....+.. ++.++||||||.++..++..+ +.+.+|+.++.++++-.-.
T Consensus 111 ~ql~~~V~~~l~~~ga~--~v~LigHS~GG~~~ry~~~~~---~~~~~V~~~~tl~tp~~Gt 167 (336)
T COG1075 111 EQLFAYVDEVLAKTGAK--KVNLIGHSMGGLDSRYYLGVL---GGANRVASVVTLGTPHHGT 167 (336)
T ss_pred HHHHHHHHHHHhhcCCC--ceEEEeecccchhhHHHHhhc---CccceEEEEEEeccCCCCc
Confidence 44455555555555554 999999999999999888875 1137899999998865443
|
|
| >COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.62 E-value=0.074 Score=51.26 Aligned_cols=73 Identities=29% Similarity=0.409 Sum_probs=52.7
Q ss_pred cccCccC-ccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 388 DHIHKCN-IPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 388 ~~l~~I~-vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
..+.++. +|+|+++|..|.++|...+..+++......+....+ ++++|..-.. .....++.+..+.+|+.++.
T Consensus 225 ~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~--~~~~H~~~~~---~~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 225 DDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFV--PGGGHIDLYD---NPPAVEQALDKLAEFLERHL 298 (299)
T ss_pred hhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEe--cCCccccccC---ccHHHHHHHHHHHHHHHHhc
Confidence 4455666 899999999999999999999999888743344444 6777654432 11122378899999998764
|
|
| >COG0627 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.59 E-value=0.073 Score=52.89 Aligned_cols=64 Identities=19% Similarity=0.331 Sum_probs=47.0
Q ss_pred CChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccC
Q 012210 218 WDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYT 287 (468)
Q Consensus 218 ~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~ 287 (468)
|.+++++..++++.++.-...... .++..++||||||.=|+.+|+++ |+++..+..+++.....
T Consensus 127 ~q~~tfl~~ELP~~~~~~f~~~~~-~~~~aI~G~SMGG~GAl~lA~~~-----pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 127 YQWETFLTQELPALWEAAFPADGT-GDGRAIAGHSMGGYGALKLALKH-----PDRFKSASSFSGILSPS 190 (316)
T ss_pred cchhHHHHhhhhHHHHHhcCcccc-cCCceeEEEeccchhhhhhhhhC-----cchhceecccccccccc
Confidence 467777777777655543221110 02679999999999999999997 89999999988876654
|
|
| >KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=94.38 E-value=0.022 Score=60.22 Aligned_cols=127 Identities=18% Similarity=0.191 Sum_probs=87.4
Q ss_pred hhhHHhhhccccccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHH
Q 012210 145 EGFNEIRGKLSSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYL 224 (468)
Q Consensus 145 ~~~~~~~~~~~~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~ 224 (468)
.+=++..|..+.||...+..|+.-...--+.|+. ++..|+...-++++|.++. -+.|-+.|....+. . .
T Consensus 461 kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~-lld~G~Vla~a~VRGGGe~----G~~WHk~G~lakKq-----N-~ 529 (712)
T KOG2237|consen 461 KKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLS-LLDRGWVLAYANVRGGGEY----GEQWHKDGRLAKKQ-----N-S 529 (712)
T ss_pred echhhhcCCCceEEEEecccceeeccccccceeE-EEecceEEEEEeeccCccc----ccchhhccchhhhc-----c-c
Confidence 3445667788888887776666544444444543 4578887777788886552 22333344443322 1 2
Q ss_pred hhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccC
Q 012210 225 EEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYT 287 (468)
Q Consensus 225 ~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~ 287 (468)
.+|+++..+||...--....++.+.|.|-||.++......+ |+-+.++|+=.|..++.
T Consensus 530 f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~r-----PdLF~avia~VpfmDvL 587 (712)
T KOG2237|consen 530 FDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQR-----PDLFGAVIAKVPFMDVL 587 (712)
T ss_pred HHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccC-----chHhhhhhhcCcceehh
Confidence 38999999999887555557999999999999999988775 88888888877766643
|
|
| >PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=93.96 E-value=0.076 Score=41.36 Aligned_cols=55 Identities=15% Similarity=0.071 Sum_probs=38.4
Q ss_pred ccccccchh---hHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHH
Q 012210 163 SSAIAIQIR---DLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAME 233 (468)
Q Consensus 163 ~~G~~~~i~---~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~ 233 (468)
.||+.++.. .+++.|+ .+||.|++.|+.|++..- +... +--++++++ +|+..+++
T Consensus 22 ~HG~~eh~~ry~~~a~~L~---~~G~~V~~~D~rGhG~S~----------g~rg--~~~~~~~~v-~D~~~~~~ 79 (79)
T PF12146_consen 22 VHGFGEHSGRYAHLAEFLA---EQGYAVFAYDHRGHGRSE----------GKRG--HIDSFDDYV-DDLHQFIQ 79 (79)
T ss_pred eCCcHHHHHHHHHHHHHHH---hCCCEEEEECCCcCCCCC----------Cccc--ccCCHHHHH-HHHHHHhC
Confidence 677877764 4666777 999999999999997731 1111 111577886 88887764
|
Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. |
| >PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases | Back alignment and domain information |
|---|
Probab=93.82 E-value=0.11 Score=48.93 Aligned_cols=21 Identities=38% Similarity=0.593 Sum_probs=17.3
Q ss_pred CcEEEEEEehhHHHHHHHHHh
Q 012210 244 GKLLAIGHSMGGILLYAMLSR 264 (468)
Q Consensus 244 ~~v~lvGhS~GG~ia~~~a~~ 264 (468)
.++.+|||||||.++-.+...
T Consensus 78 ~~IsfIgHSLGGli~r~al~~ 98 (217)
T PF05057_consen 78 RKISFIGHSLGGLIARYALGL 98 (217)
T ss_pred ccceEEEecccHHHHHHHHHH
Confidence 489999999999998655553
|
|
| >COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.73 E-value=0.12 Score=49.54 Aligned_cols=50 Identities=22% Similarity=0.389 Sum_probs=39.1
Q ss_pred HHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCC
Q 012210 234 YIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTS 288 (468)
Q Consensus 234 ~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~ 288 (468)
++...+..+.++..++|||+||.+++.....+ |+.+.+.++++|+.-...
T Consensus 127 ~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~-----p~~F~~y~~~SPSlWw~n 176 (264)
T COG2819 127 FIEARYRTNSERTAIIGHSLGGLFVLFALLTY-----PDCFGRYGLISPSLWWHN 176 (264)
T ss_pred HHhcccccCcccceeeeecchhHHHHHHHhcC-----cchhceeeeecchhhhCC
Confidence 34444555556789999999999999999886 888999999988765443
|
|
| >PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria | Back alignment and domain information |
|---|
Probab=93.45 E-value=0.18 Score=45.73 Aligned_cols=57 Identities=19% Similarity=0.198 Sum_probs=44.3
Q ss_pred HhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcccccc
Q 012210 224 LEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 286 (468)
Q Consensus 224 ~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~ 286 (468)
...++..+++-|+... ....++.++|||+|+.++-..+... ...+..+|++++|...
T Consensus 90 ga~~L~~f~~gl~a~~-~~~~~~tv~GHSYGS~v~G~A~~~~-----~~~vddvv~~GSPG~g 146 (177)
T PF06259_consen 90 GAPRLARFLDGLRATH-GPDAHLTVVGHSYGSTVVGLAAQQG-----GLRVDDVVLVGSPGMG 146 (177)
T ss_pred HHHHHHHHHHHhhhhc-CCCCCEEEEEecchhHHHHHHhhhC-----CCCcccEEEECCCCCC
Confidence 3478888888887765 2235899999999999998888763 5689999999876543
|
Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates. |
| >PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=93.32 E-value=0.16 Score=47.03 Aligned_cols=42 Identities=29% Similarity=0.390 Sum_probs=34.6
Q ss_pred HHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhc
Q 012210 223 YLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRC 265 (468)
Q Consensus 223 ~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~ 265 (468)
.+..|+.++.++...+.+. ..+++|+|||+|+.++..++..+
T Consensus 75 ~ay~DV~~AF~~yL~~~n~-GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 75 LAYSDVRAAFDYYLANYNN-GRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhHHHHHHHHHHHHHhcCC-CCCEEEEEeChHHHHHHHHHHHH
Confidence 4458999999988777644 25899999999999999998874
|
|
| >PLN02408 phospholipase A1 | Back alignment and domain information |
|---|
Probab=93.30 E-value=0.14 Score=51.70 Aligned_cols=40 Identities=20% Similarity=0.141 Sum_probs=28.5
Q ss_pred hhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhc
Q 012210 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRC 265 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~ 265 (468)
+.+.+.|..+...++....+|++.|||+||.+|...|...
T Consensus 182 ~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 182 EMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 4555556655555443223699999999999999988764
|
|
| >PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids [] | Back alignment and domain information |
|---|
Probab=93.09 E-value=0.2 Score=45.64 Aligned_cols=58 Identities=21% Similarity=0.240 Sum_probs=41.5
Q ss_pred hhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHh--cCCCCCcccccceeEEccccc
Q 012210 225 EEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSR--CGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 225 ~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~--~~~~~~p~~V~~lVllap~~~ 285 (468)
..++...|+....+.+.. |++|+|+|+|+.++..++.. .. .....+|.++|+++-|..
T Consensus 64 ~~~~~~~i~~~~~~CP~~--kivl~GYSQGA~V~~~~~~~~~l~-~~~~~~I~avvlfGdP~~ 123 (179)
T PF01083_consen 64 VANLVRLIEEYAARCPNT--KIVLAGYSQGAMVVGDALSGDGLP-PDVADRIAAVVLFGDPRR 123 (179)
T ss_dssp HHHHHHHHHHHHHHSTTS--EEEEEEETHHHHHHHHHHHHTTSS-HHHHHHEEEEEEES-TTT
T ss_pred HHHHHHHHHHHHHhCCCC--CEEEEecccccHHHHHHHHhccCC-hhhhhhEEEEEEecCCcc
Confidence 366677777666665544 99999999999999998865 10 001468999999987655
|
Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A .... |
| >PLN02162 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=92.95 E-value=0.21 Score=51.56 Aligned_cols=56 Identities=23% Similarity=0.301 Sum_probs=32.5
Q ss_pred hHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCC---cccccceeEEcccc
Q 012210 227 DVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGR---ESRLAAIVTLASSL 284 (468)
Q Consensus 227 D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~---p~~V~~lVllap~~ 284 (468)
.+.+.++.+..+.+. .++++.|||+||.+|..+|+....... ..++.++++++.|-
T Consensus 263 ~I~~~L~~lL~k~p~--~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqPR 321 (475)
T PLN02162 263 TIRQMLRDKLARNKN--LKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQPR 321 (475)
T ss_pred HHHHHHHHHHHhCCC--ceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCCC
Confidence 344444444444333 389999999999999987663210110 12345666766543
|
|
| >PLN02454 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=92.84 E-value=0.18 Score=51.51 Aligned_cols=41 Identities=17% Similarity=0.192 Sum_probs=31.3
Q ss_pred hhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhc
Q 012210 225 EEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRC 265 (468)
Q Consensus 225 ~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~ 265 (468)
.+++.+.|+.+...++...-+|++.|||+||.+|...|...
T Consensus 209 r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di 249 (414)
T PLN02454 209 RSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFDI 249 (414)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHH
Confidence 46777778877776654322599999999999999998653
|
|
| >PLN00413 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=92.25 E-value=0.29 Score=50.71 Aligned_cols=56 Identities=21% Similarity=0.271 Sum_probs=33.9
Q ss_pred hHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCC---CCcccccceeEEcccc
Q 012210 227 DVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFE---GRESRLAAIVTLASSL 284 (468)
Q Consensus 227 D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~---~~p~~V~~lVllap~~ 284 (468)
.+...++.+....+.. ++.+.|||+||.+|..+|...... ....++.++.++++|-
T Consensus 269 ~i~~~Lk~ll~~~p~~--kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PR 327 (479)
T PLN00413 269 TILRHLKEIFDQNPTS--KFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPR 327 (479)
T ss_pred HHHHHHHHHHHHCCCC--eEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCC
Confidence 4455555555554433 899999999999999888632000 0122455566666543
|
|
| >KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=91.59 E-value=0.14 Score=51.78 Aligned_cols=55 Identities=13% Similarity=0.250 Sum_probs=45.2
Q ss_pred HhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccc
Q 012210 224 LEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASS 283 (468)
Q Consensus 224 ~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~ 283 (468)
+..|+..+|..|+..+.....+|+++|-|+|||++..+=.+| |.-|.+.+.-+.|
T Consensus 147 ALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKY-----PHiv~GAlAaSAP 201 (492)
T KOG2183|consen 147 ALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKY-----PHIVLGALAASAP 201 (492)
T ss_pred HHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcC-----hhhhhhhhhccCc
Confidence 349999999999998777667999999999999999998888 7666666554433
|
|
| >PLN02571 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=91.48 E-value=0.26 Score=50.42 Aligned_cols=40 Identities=18% Similarity=0.195 Sum_probs=27.9
Q ss_pred hhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhc
Q 012210 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRC 265 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~ 265 (468)
+++.+.++.+...+....-++++.|||+||.+|...|...
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~dl 247 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVDI 247 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHHH
Confidence 4555555555554432223799999999999999988753
|
|
| >PLN02802 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=91.11 E-value=0.34 Score=50.65 Aligned_cols=40 Identities=20% Similarity=0.290 Sum_probs=27.8
Q ss_pred hhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhc
Q 012210 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRC 265 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~ 265 (468)
+++.+.+..+...+....-+|++.|||+||.+|...|...
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 3455555555555433223799999999999999988754
|
|
| >PLN02310 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=91.02 E-value=0.33 Score=49.62 Aligned_cols=21 Identities=33% Similarity=0.409 Sum_probs=18.6
Q ss_pred CcEEEEEEehhHHHHHHHHHh
Q 012210 244 GKLLAIGHSMGGILLYAMLSR 264 (468)
Q Consensus 244 ~~v~lvGhS~GG~ia~~~a~~ 264 (468)
-+|++.|||+||.+|...|..
T Consensus 209 ~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred ceEEEEcccHHHHHHHHHHHH
Confidence 379999999999999988865
|
|
| >PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=90.61 E-value=0.62 Score=48.54 Aligned_cols=62 Identities=13% Similarity=0.218 Sum_probs=46.3
Q ss_pred ChhhHHhhhHHHHHHHHHhhcC-CCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcccccc
Q 012210 219 DFDHYLEEDVPAAMEYIRAQSK-PKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 286 (468)
Q Consensus 219 ~~~~~~~~D~~a~i~~l~~~~~-~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~ 286 (468)
+.++.+ .|+..++++++.+.. ....|++++|-|+||+++..+-.+| |+-|.+.+..+++...
T Consensus 88 t~~QAL-aD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~ky-----P~~~~ga~ASSapv~a 150 (434)
T PF05577_consen 88 TSEQAL-ADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKY-----PHLFDGAWASSAPVQA 150 (434)
T ss_dssp SHHHHH-HHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH------TTT-SEEEEET--CCH
T ss_pred CHHHHH-HHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhC-----CCeeEEEEeccceeee
Confidence 556655 999999999997653 2335899999999999999999999 8889988888766543
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C. |
| >COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=90.09 E-value=0.55 Score=47.46 Aligned_cols=75 Identities=16% Similarity=0.179 Sum_probs=53.5
Q ss_pred cccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCc
Q 012210 166 IAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGK 245 (468)
Q Consensus 166 ~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~ 245 (468)
..+--++++..|+ .+|+.|+..|-+.+. |... +.++.+ .|+..++++...+.+.+ +
T Consensus 272 Wr~lDk~v~~~l~---~~gvpVvGvdsLRYf--W~~r----------------tPe~~a-~Dl~r~i~~y~~~w~~~--~ 327 (456)
T COG3946 272 WRDLDKEVAEALQ---KQGVPVVGVDSLRYF--WSER----------------TPEQIA-ADLSRLIRFYARRWGAK--R 327 (456)
T ss_pred hhhhhHHHHHHHH---HCCCceeeeehhhhh--hccC----------------CHHHHH-HHHHHHHHHHHHhhCcc--e
Confidence 3333467788888 899999986654430 1110 344555 99999999999988887 9
Q ss_pred EEEEEEehhHHHHHHHHHh
Q 012210 246 LLAIGHSMGGILLYAMLSR 264 (468)
Q Consensus 246 v~lvGhS~GG~ia~~~a~~ 264 (468)
+.++|+|+|+=+.-..-.+
T Consensus 328 ~~liGySfGADvlP~~~n~ 346 (456)
T COG3946 328 VLLIGYSFGADVLPFAYNR 346 (456)
T ss_pred EEEEeecccchhhHHHHHh
Confidence 9999999999776544444
|
|
| >PLN02324 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=89.84 E-value=0.45 Score=48.71 Aligned_cols=39 Identities=18% Similarity=0.278 Sum_probs=28.1
Q ss_pred hhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHh
Q 012210 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSR 264 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~ 264 (468)
+.+.+.|..+...++...-+|++.|||+||.+|...|..
T Consensus 197 eqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 197 EQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 455555666665544322379999999999999998865
|
|
| >PLN02847 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=89.60 E-value=0.75 Score=48.98 Aligned_cols=38 Identities=16% Similarity=0.066 Sum_probs=25.8
Q ss_pred hhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhc
Q 012210 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRC 265 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~ 265 (468)
..+...+..+....+. -++.++|||+||.+|..++...
T Consensus 235 ~~i~~~L~kal~~~Pd--YkLVITGHSLGGGVAALLAilL 272 (633)
T PLN02847 235 KLSTPCLLKALDEYPD--FKIKIVGHSLGGGTAALLTYIL 272 (633)
T ss_pred HHHHHHHHHHHHHCCC--CeEEEeccChHHHHHHHHHHHH
Confidence 4444444444444333 3899999999999998887753
|
|
| >KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=89.56 E-value=2.5 Score=40.59 Aligned_cols=95 Identities=18% Similarity=0.194 Sum_probs=59.1
Q ss_pred ccccccchh-----hHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHh
Q 012210 163 SSAIAIQIR-----DLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRA 237 (468)
Q Consensus 163 ~~G~~~~i~-----~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~ 237 (468)
+||+.+.+. .+.+.+.+ -.|..|++.++.+... ... +.-. .+.+..+.++++.
T Consensus 29 ~HGigd~c~~~~~~~~~q~l~~--~~g~~v~~leig~g~~-----------~s~--------l~pl-~~Qv~~~ce~v~~ 86 (296)
T KOG2541|consen 29 WHGIGDSCSSLSMANLTQLLEE--LPGSPVYCLEIGDGIK-----------DSS--------LMPL-WEQVDVACEKVKQ 86 (296)
T ss_pred EeccCcccccchHHHHHHHHHh--CCCCeeEEEEecCCcc-----------hhh--------hccH-HHHHHHHHHHHhc
Confidence 788866554 45566664 3588888866654311 000 1111 1344445555553
Q ss_pred hcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcccc
Q 012210 238 QSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSL 284 (468)
Q Consensus 238 ~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~ 284 (468)
-.... .=++++|.|+||.++-.++..+. .+.|+..|.+++|-
T Consensus 87 m~~ls-qGynivg~SQGglv~Raliq~cd----~ppV~n~ISL~gPh 128 (296)
T KOG2541|consen 87 MPELS-QGYNIVGYSQGGLVARALIQFCD----NPPVKNFISLGGPH 128 (296)
T ss_pred chhcc-CceEEEEEccccHHHHHHHHhCC----CCCcceeEeccCCc
Confidence 32221 35899999999999999999872 46799999998754
|
|
| >COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.47 E-value=0.69 Score=46.11 Aligned_cols=51 Identities=16% Similarity=0.270 Sum_probs=41.0
Q ss_pred ccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCccc
Q 012210 389 HIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYD 442 (468)
Q Consensus 389 ~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e 442 (468)
...++.+|-.++.|..|.+.+++++...+..+|+. +.+.++ |+..|..-..
T Consensus 324 y~~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~-kaLrmv--PN~~H~~~n~ 374 (507)
T COG4287 324 YQLRLALPKYIVNASGDDFFVPDSANLYYDDLPGE-KALRMV--PNDPHNLINQ 374 (507)
T ss_pred hhhhccccceeecccCCcccCCCccceeeccCCCc-eeeeeC--CCCcchhhHH
Confidence 34678899999999999999999999999999984 455555 7777765543
|
|
| >KOG2521 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=89.35 E-value=5.2 Score=40.22 Aligned_cols=67 Identities=21% Similarity=0.192 Sum_probs=52.2
Q ss_pred CccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 394 NIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 394 ~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
-.+.+.+.+..|.++|.+..+++.+........+..+...++.|..|+. ..|....+...+|++...
T Consensus 225 ~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r-----~~p~~y~~~~~~Fl~~~~ 291 (350)
T KOG2521|consen 225 PWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFR-----SFPKTYLKKCSEFLRSVI 291 (350)
T ss_pred cccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeec-----cCcHHHHHHHHHHHHhcc
Confidence 5778888899999999999998866554433344444447889999986 478999999999998764
|
|
| >PLN03037 lipase class 3 family protein; Provisional | Back alignment and domain information |
|---|
Probab=88.97 E-value=0.53 Score=49.32 Aligned_cols=21 Identities=33% Similarity=0.395 Sum_probs=18.6
Q ss_pred CcEEEEEEehhHHHHHHHHHh
Q 012210 244 GKLLAIGHSMGGILLYAMLSR 264 (468)
Q Consensus 244 ~~v~lvGhS~GG~ia~~~a~~ 264 (468)
.++.+.|||+||.+|...|..
T Consensus 318 ~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHH
Confidence 379999999999999988864
|
|
| >PLN02934 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=88.76 E-value=0.54 Score=49.15 Aligned_cols=37 Identities=24% Similarity=0.380 Sum_probs=27.8
Q ss_pred hhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHh
Q 012210 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSR 264 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~ 264 (468)
+.+...++.+....+.. ++++.|||+||.+|..+|..
T Consensus 305 ~~v~~~lk~ll~~~p~~--kIvVTGHSLGGALAtLaA~~ 341 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNA--KFVVTGHSLGGALAILFPTV 341 (515)
T ss_pred HHHHHHHHHHHHHCCCC--eEEEeccccHHHHHHHHHHH
Confidence 34566666666655444 89999999999999998754
|
|
| >PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins | Back alignment and domain information |
|---|
Probab=88.60 E-value=0.95 Score=45.46 Aligned_cols=44 Identities=16% Similarity=0.255 Sum_probs=33.5
Q ss_pred CcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccC
Q 012210 244 GKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYT 287 (468)
Q Consensus 244 ~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~ 287 (468)
.+|.+||||+|+.+.+..+..........-|..+++++.|.+..
T Consensus 220 RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~ 263 (345)
T PF05277_consen 220 RPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSD 263 (345)
T ss_pred CceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCC
Confidence 38999999999999988877653232234589999998877643
|
|
| >PLN02761 lipase class 3 family protein | Back alignment and domain information |
|---|
Probab=88.35 E-value=0.66 Score=48.69 Aligned_cols=39 Identities=21% Similarity=0.210 Sum_probs=28.4
Q ss_pred hhHHHHHHHHHhhcC----CCCCcEEEEEEehhHHHHHHHHHh
Q 012210 226 EDVPAAMEYIRAQSK----PKDGKLLAIGHSMGGILLYAMLSR 264 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~----~~~~~v~lvGhS~GG~ia~~~a~~ 264 (468)
+++.+.|..+...++ ...-+|++.|||+||.+|...|..
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 556666666666552 122379999999999999988864
|
|
| >PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
Probab=88.29 E-value=0.92 Score=46.20 Aligned_cols=55 Identities=18% Similarity=0.191 Sum_probs=41.7
Q ss_pred hhhHHhhhHHHHHHHHHhhcCCCCC--cEEEEEEehhHHHHHHHHHhcCCCCCcccccceeE
Q 012210 220 FDHYLEEDVPAAMEYIRAQSKPKDG--KLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVT 279 (468)
Q Consensus 220 ~~~~~~~D~~a~i~~l~~~~~~~~~--~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVl 279 (468)
+.-|.+-|+..++.++..+.+...+ +++++|+|.||.++...|--- |-.+.+++=
T Consensus 158 ~GIMqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~a-----P~~~~~~iD 214 (403)
T PF11144_consen 158 FGIMQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIA-----PWLFDGVID 214 (403)
T ss_pred hHHHHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhC-----ccceeEEEe
Confidence 4455668999999999888765545 899999999999999988652 555555543
|
|
| >cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc | Back alignment and domain information |
|---|
Probab=88.14 E-value=0.5 Score=49.98 Aligned_cols=59 Identities=14% Similarity=0.151 Sum_probs=45.0
Q ss_pred HhhhHHHHHHHHHhhc---CCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccc
Q 012210 224 LEEDVPAAMEYIRAQS---KPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 224 ~~~D~~a~i~~l~~~~---~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
...|..+++++++... +.+..+|+++|+|.||.++..++... ..+..++++|++++...
T Consensus 153 g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~---~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 153 GLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSP---DSKGLFHRAISQSGSAL 214 (493)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCc---chhHHHHHHhhhcCCcc
Confidence 3489999999998763 55567999999999999998888762 11446888888876443
|
) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| >PLN02753 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=87.09 E-value=0.85 Score=47.92 Aligned_cols=39 Identities=21% Similarity=0.301 Sum_probs=28.0
Q ss_pred hhHHHHHHHHHhhcCC---CCCcEEEEEEehhHHHHHHHHHh
Q 012210 226 EDVPAAMEYIRAQSKP---KDGKLLAIGHSMGGILLYAMLSR 264 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~~---~~~~v~lvGhS~GG~ia~~~a~~ 264 (468)
+.+.+.|+.+...++. ..-+|.+.|||+||.+|...|..
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 4556666666555432 12489999999999999998864
|
|
| >PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children | Back alignment and domain information |
|---|
Probab=86.89 E-value=1.4 Score=42.88 Aligned_cols=54 Identities=24% Similarity=0.471 Sum_probs=35.1
Q ss_pred hhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcccc
Q 012210 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSL 284 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~ 284 (468)
+.+..+.+.++...... +=+++||||+||.++-.++.+|+ .+.|+.+|.++++-
T Consensus 63 ~Qv~~vc~~l~~~p~L~-~G~~~IGfSQGgl~lRa~vq~c~----~~~V~nlISlggph 116 (279)
T PF02089_consen 63 DQVEQVCEQLANDPELA-NGFNAIGFSQGGLFLRAYVQRCN----DPPVHNLISLGGPH 116 (279)
T ss_dssp HHHHHHHHHHHH-GGGT-T-EEEEEETCHHHHHHHHHHH-T----SS-EEEEEEES--T
T ss_pred HHHHHHHHHHhhChhhh-cceeeeeeccccHHHHHHHHHCC----CCCceeEEEecCcc
Confidence 34444445555433222 35899999999999999999983 45799999998754
|
Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A. |
| >PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters | Back alignment and domain information |
|---|
Probab=86.25 E-value=1.6 Score=44.18 Aligned_cols=64 Identities=16% Similarity=0.260 Sum_probs=46.8
Q ss_pred hhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccC
Q 012210 221 DHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYT 287 (468)
Q Consensus 221 ~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~ 287 (468)
.... .++.+..++|.+..+.+ +|+++|-|.||.+++.++..........--+++|+++|-....
T Consensus 175 PtQL-~qlv~~Y~~Lv~~~G~~--nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 175 PTQL-RQLVATYDYLVESEGNK--NIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred chHH-HHHHHHHHHHHhccCCC--eEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 3444 88889999998666776 9999999999999998887652212223357889988855543
|
In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved []. |
| >PLN02719 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=86.10 E-value=1 Score=47.22 Aligned_cols=40 Identities=20% Similarity=0.269 Sum_probs=28.5
Q ss_pred hhHHHHHHHHHhhcCC---CCCcEEEEEEehhHHHHHHHHHhc
Q 012210 226 EDVPAAMEYIRAQSKP---KDGKLLAIGHSMGGILLYAMLSRC 265 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~~---~~~~v~lvGhS~GG~ia~~~a~~~ 265 (468)
+++.+.|..+...++. ...+|.+.|||+||.+|...|...
T Consensus 277 eQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl 319 (518)
T PLN02719 277 EQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDV 319 (518)
T ss_pred HHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHH
Confidence 5566666666655431 123799999999999999988653
|
|
| >COG2272 PnbA Carboxylesterase type B [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=83.02 E-value=2.7 Score=43.85 Aligned_cols=60 Identities=13% Similarity=0.159 Sum_probs=45.9
Q ss_pred HhhhHHHHHHHHHhh---cCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcccccc
Q 012210 224 LEEDVPAAMEYIRAQ---SKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 286 (468)
Q Consensus 224 ~~~D~~a~i~~l~~~---~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~ 286 (468)
...|...+++++++. .+.+.++|.|+|+|-|++.++.+.+.- ....-++++|+.+++...
T Consensus 157 Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P---~AkGLF~rAi~~Sg~~~~ 219 (491)
T COG2272 157 GLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVP---SAKGLFHRAIALSGAASR 219 (491)
T ss_pred cHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCc---cchHHHHHHHHhCCCCCc
Confidence 348999999999875 456667999999999999998877651 113457888888877653
|
|
| >PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases | Back alignment and domain information |
|---|
Probab=82.46 E-value=1.8 Score=46.03 Aligned_cols=59 Identities=14% Similarity=0.166 Sum_probs=44.4
Q ss_pred hHHhhhHHHHHHHHHhhc---CCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccc
Q 012210 222 HYLEEDVPAAMEYIRAQS---KPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASS 283 (468)
Q Consensus 222 ~~~~~D~~a~i~~l~~~~---~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~ 283 (468)
.+...|...+++++++.. +.+.++|.|+|||-||..+..++..- ....-++++|+.+++
T Consensus 183 N~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp---~~~~LF~raI~~SGs 244 (535)
T PF00135_consen 183 NYGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSP---SSKGLFHRAILQSGS 244 (535)
T ss_dssp THHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGG---GGTTSBSEEEEES--
T ss_pred hhhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeecc---ccccccccccccccc
Confidence 455689999999999864 44556899999999999998777651 113468899998773
|
Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A .... |
| >KOG4569 consensus Predicted lipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=81.77 E-value=1.8 Score=43.52 Aligned_cols=38 Identities=18% Similarity=0.213 Sum_probs=28.1
Q ss_pred hhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhc
Q 012210 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRC 265 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~ 265 (468)
..+.+.++.|....+.- ++.+-|||+||.+|...|...
T Consensus 155 ~~~~~~~~~L~~~~~~~--~i~vTGHSLGgAlA~laa~~i 192 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNY--SIWVTGHSLGGALASLAALDL 192 (336)
T ss_pred HHHHHHHHHHHHhcCCc--EEEEecCChHHHHHHHHHHHH
Confidence 34555555555555543 999999999999999988764
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A* Length = 377 | Back alignment and structure |
|---|
Score = 73.1 bits (179), Expect = 3e-14
Identities = 48/268 (17%), Positives = 93/268 (34%), Gaps = 34/268 (12%)
Query: 216 YDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLA 275
+ + FD + D+PA +++I ++ KL +GHS G + + S + +
Sbjct: 119 WAFSFDEMAKYDLPATIDFILKKTGQD--KLHYVGHSQGTTIGFIAFSTNPKLAKRIKTF 176
Query: 276 AIVTLASSLDYTSSKSTLKLLLPLADPAQALNV----PVVPLGALLTAAYPLSSSPPYVF 331
+ +++ YT + +L+P P L + +
Sbjct: 177 YALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLC 236
Query: 332 SWLNNLISAEDMMH--PELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKD- 388
S +I D M+ L + +N + +L + A + G + F +
Sbjct: 237 SNALFIICGFDTMNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQ----AFDWGSP 292
Query: 389 ---------------HIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEP 433
++ ++PI G DL+ P V+ + LP + K+
Sbjct: 293 VQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLLSKLPNLIYHRKI---- 348
Query: 434 SGPHYAHYDLVGGRMAVEQVYPCIVQFL 461
P Y H D + A + VY IV +
Sbjct: 349 --PPYNHLDFIWAMDAPQAVYNEIVSMM 374
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} Length = 354 | Back alignment and structure |
|---|
Score = 72.3 bits (176), Expect = 4e-14
Identities = 43/266 (16%), Positives = 91/266 (34%), Gaps = 34/266 (12%)
Query: 208 KQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGI--LLYAMLSRC 265
K L +W + ++ D+ + +I+ S + ++ G S GGI L Y+ L
Sbjct: 111 KDRQLSFTANWGWSTWIS-DIKEVVSFIKRDSGQE--RIYLAGESFGGIAALNYSSLYW- 166
Query: 266 GFEGRESRLAAIVTLASS-LDYTSSKSTLKLLLPLADPAQALNVPVVPLGA-LLTAAYPL 323
++ + ++ L + + + +A + V+P +
Sbjct: 167 -----KNDIKGLILLDGGPTKHGIRPKFYTPEVNSIEEMEAKGIYVIPSRGGPNNPIWSY 221
Query: 324 SSSPPYVFSWLNNLISAEDMMHPELLKKLVLN---NFCTIPAKLILQLTTAFREGGLR-- 378
+ + P + S S D + L N + + L + R
Sbjct: 222 ALANPDMPSPDPKYKSISDFLMDSLYVTGSANPYDYPYSKKEDMFPILASFDPYWPYRLS 281
Query: 379 -DRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPH 437
+R KF Y+ +P +A ++ I K+LP + + G
Sbjct: 282 LERDLKFDYEG----ILVPTIAFVSERFGIQIF-----DSKILPSNSEIILLKG------ 326
Query: 438 YAHYDLVGGRMAVEQVYPCIVQFLGR 463
Y H D+ G + + V ++++L +
Sbjct: 327 YGHLDVYTGENSEKDVNSVVLKWLSQ 352
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 67.2 bits (163), Expect = 6e-12
Identities = 76/515 (14%), Positives = 155/515 (30%), Gaps = 144/515 (27%)
Query: 8 TWILEVR-GAGLSVRG------SNL-KEAQQSAHGVSEQME------AVANSTTSEAFAK 53
+LE+R + + G + + + S + V +M+ + N + E +
Sbjct: 142 QALLELRPAKNVLIDGVLGSGKTWVALDVCLS-YKVQCKMDFKIFWLNLKNCNSPETVLE 200
Query: 54 SATNGVYSADPQLTDFPGALSDSKISPVKKEDDLTRLAT-------------VWDESKLV 100
+Y DP T S+ K+ + +L RL V +
Sbjct: 201 MLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQN----- 255
Query: 101 TKLTETFMSLSERLSGFLSENQSKIM----SAKLFDQIS----KLLEDSQLSEGFN--EI 150
K F KI+ ++ D +S + S E+
Sbjct: 256 AKAWNAF------------NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEV 303
Query: 151 RGKLSSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFD-----LQERLFSTIDD 205
+ L L+ R + ++ + +++I E + +D ++L + I+
Sbjct: 304 KSLLLKYLDCRPQD-LPREVLTTNPRRLSIIAE-SIRDGLATWDNWKHVNCDKLTTIIES 361
Query: 206 FQKQLD--LIVQYDWDFDHYLEEDV--PAA-MEYIRAQSKPKDGKLLAIGHSMGGILLYA 260
L+ + P + I D + + + Y+
Sbjct: 362 SLNVLEPAEYRKMFDRLS-VFPPSAHIPTILLSLIWFDVIKSD-----VMVVVNKLHKYS 415
Query: 261 MLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAA 320
++ + E + +I L+L + L + L +
Sbjct: 416 LVEKQPKEST-ISIPSI--------------YLELKVKLENEYA--------LHRSIVDH 452
Query: 321 YPLSS-------SPP----YVFSWLN-NLISAEDMMHPELLKKLVLN-NFCTIPAKLILQ 367
Y + PP Y +S + +L + E L + + L+ F + K+
Sbjct: 453 YNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRF--LEQKIRHD 510
Query: 368 LTTAFREGGLRDRGGKF-FYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLP---ED 423
T G + + + FYK +I N P V + LP E+
Sbjct: 511 STAWNASGSILNTLQQLKFYKPYICD-NDPK-----------YERLVNAILDFLPKIEEN 558
Query: 424 LVTYKVFGEPSGPHYAHYDLVGGRMAV----EQVY 454
L+ K + DL+ R+A+ E ++
Sbjct: 559 LICSK-----------YTDLL--RIALMAEDEAIF 580
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 59.1 bits (142), Expect = 2e-09
Identities = 70/413 (16%), Positives = 129/413 (31%), Gaps = 126/413 (30%)
Query: 139 EDSQLSEGFNEIRGKLSSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQER 198
E + + +I LS + + ++D+ +++++ E + +S R
Sbjct: 10 ETGEHQYQYKDI---LSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLR 66
Query: 199 LFSTIDDFQKQLDLIVQ----------YDWDFDHYLEEDV-PAAM--EYIRAQSKP-KDG 244
LF T+ Q++ +VQ Y + E P+ M YI + + D
Sbjct: 67 LFWTLLSKQEE---MVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDN 123
Query: 245 KLLAIGH------------------SMGGILLYAMLSRCGFEGRESRLAAIVTLASS--- 283
++ A + +L+ +L G G+ + +A V L+
Sbjct: 124 QVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVL---GS-GK-TWVALDVCLSYKVQC 178
Query: 284 --------LDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSW-- 333
L+ + S +L L Q L + P T+ SS+
Sbjct: 179 KMDFKIFWLNLKNCNSPETVLEML----QKLLYQIDP---NWTSRSDHSSNIKLRIHSIQ 231
Query: 334 --LNNLISAEDMMHPELLKKLVLNN---------F---CTIPAKLILQLTTAFREGGLRD 379
L L+ ++ + L LVL N F C I L+ TT R + D
Sbjct: 232 AELRRLLKSKP--YENCL--LVLLNVQNAKAWNAFNLSCKI---LL---TT--RFKQVTD 279
Query: 380 RGGKFFYK----DHIHKCNIP-----ILA-IAG--DQDLICPPEAVEETVKLLPEDLVTY 427
DH P +L QDL P E + P
Sbjct: 280 FLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDL--PREV----LTTNP--RRL- 330
Query: 428 KVFGE--PSGP----HYAHYD------LVGGRMAVEQVYPCIVQFLGRYDSVS 468
+ E G ++ H + ++ ++ + P + +D +S
Sbjct: 331 SIIAESIRDGLATWDNWKHVNCDKLTTII--ESSLNVLEPAEYR--KMFDRLS 379
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.8 bits (110), Expect = 2e-05
Identities = 59/414 (14%), Positives = 120/414 (28%), Gaps = 121/414 (29%)
Query: 125 IMSAKLFDQISKLLE-----DSQLSEGFNEIRGKLSSLLERRQSSAIAIQIRDL-SQNLV 178
M KL QI S + + I+ +L LL+ + + + ++ +
Sbjct: 200 EMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAW 259
Query: 179 NMIEEGQLSVSPQLFDLQER-LFSTID----DF-----QKQLDLIVQYDWDFDHYLEEDV 228
N F+L + L +T DF + L + + +
Sbjct: 260 NA------------FNLSCKILLTTRFKQVTDFLSAATTTHISL-DHHSMTLTPDEVKSL 306
Query: 229 PAAMEYIRAQSKP---KDGKLLAIGHSMGGILLYAMLSRCGFEG----RESRLAAIVTLA 281
R Q P + S+ + L+ ++ +L I +
Sbjct: 307 LLKYLDCRPQDLPREVLTTNPRRL--SIIAESIRDGLAT--WDNWKHVNCDKLTTI--IE 360
Query: 282 SSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFS--WLNNL-I 338
SSL+ K+ L+ V P A + P + S W + +
Sbjct: 361 SSLNVLEPAEYRKMFDRLS---------VFPPSAHI---------PTILLSLIWFDVIKS 402
Query: 339 SAEDMMHPELLKKLVLN-----NFCTIP-----------------AKLI--LQLTTAFRE 374
+++ +L K ++ + +IP ++ + F
Sbjct: 403 DVMVVVN-KLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDS 461
Query: 375 GGL-RDRGGKFFYKDHI--HKCNI---------PIL---------AIAGDQDLICPPEAV 413
L ++FY HI H NI ++ I D ++
Sbjct: 462 DDLIPPYLDQYFYS-HIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSI 520
Query: 414 EETVKLLPEDLVTYKVFGEPSGPHYAHY--DLVGGRMAVEQV-----YPCIVQF 460
T+ + L YK + + P Y ++ +E+ Y +++
Sbjct: 521 LNTL----QQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRI 570
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} Length = 282 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 3e-09
Identities = 36/219 (16%), Positives = 63/219 (28%), Gaps = 52/219 (23%)
Query: 249 IGHSMGG-ILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALN 307
IGHS+ I A R++ I + S + + D
Sbjct: 103 IGHSVSSIIAGIASTHV------GDRISDITMICPSPCF---------MNFPPDYVGGFE 147
Query: 308 VPVV-PLGALLTAAYPLSSSPPYVFSWLNNLISAEDMM----HPELLKKLVLNNFCTIPA 362
+ L L+ Y W N L A +M EL+ +L +FCT
Sbjct: 148 RDDLEELINLMDKNYI---------GWANYL--APLVMGASHSSELIGEL-SGSFCTTDP 195
Query: 363 KLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPE 422
+ A R + + P L +D + PE + + +P
Sbjct: 196 IVAKTFAKATFFSDYRSL---------LEDISTPALIFQSAKDSLASPEVGQYMAENIPN 246
Query: 423 DLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFL 461
++ + H H + P ++ F+
Sbjct: 247 --SQLELI--QAEGHCLHMT------DAGLITPLLIHFI 275
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* Length = 303 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 1e-08
Identities = 42/246 (17%), Positives = 78/246 (31%), Gaps = 50/246 (20%)
Query: 219 DFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIV 278
DF ++ DV ++ ++ + +GHSMGG + + R A +V
Sbjct: 92 DFHVFVR-DVLQHVDSMQKDYP--GLPVFLLGHSMGGAIAILTAAE-----RPGHFAGMV 143
Query: 279 TLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLI 338
++ L+L + A V +L + P SS P S L+
Sbjct: 144 LISP------------LVLANPESATTF---KVLAAKVLNSVLPNLSSGPIDSSVLSR-- 186
Query: 339 SAEDMMHPELLKKLV---LNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNI 395
+ + L + +QL A + + K +
Sbjct: 187 ---N---KTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRV-----------ERALPKLTV 229
Query: 396 PILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYP 455
P L + G D +C + ++L T K++ H H +L V+
Sbjct: 230 PFLLLQGSADRLCDSKGAYLLMELAKSQDKTLKIY--EGAYHVLHKELPEVT---NSVFH 284
Query: 456 CIVQFL 461
I ++
Sbjct: 285 EINMWV 290
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} Length = 342 | Back alignment and structure |
|---|
Score = 55.1 bits (133), Expect = 2e-08
Identities = 42/245 (17%), Positives = 83/245 (33%), Gaps = 44/245 (17%)
Query: 219 DFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIV 278
DF ++ DV ++ ++ + +GHSMGG + + R A +V
Sbjct: 110 DFHVFVR-DVLQHVDSMQKD--YPGLPVFLLGHSMGGAIAILTAAE-----RPGHFAGMV 161
Query: 279 TLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLI 338
L S L + +S + A + +P + LG + ++ LS + V + ++
Sbjct: 162 -LISPLVLANPESATTFKVLAAKVLNLV-LPNLSLGPIDSSV--LSRNKTEVDIYNSD-- 215
Query: 339 SAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPIL 398
L+ +QL A + + K +P L
Sbjct: 216 ------------PLICRAGLK--VCFGIQLLNAVSRV-----------ERALPKLTVPFL 250
Query: 399 AIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIV 458
+ G D +C + ++L T K++ H H +L V+ I
Sbjct: 251 LLQGSADRLCDSKGAYLLMELAKSQDKTLKIY--EGAYHVLHKELPEVT---NSVFHEIN 305
Query: 459 QFLGR 463
++ +
Sbjct: 306 MWVSQ 310
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} Length = 314 | Back alignment and structure |
|---|
Score = 53.2 bits (128), Expect = 7e-08
Identities = 28/213 (13%), Positives = 59/213 (27%), Gaps = 39/213 (18%)
Query: 249 IGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNV 308
+GHS+G ++ + ++V + + + A ++
Sbjct: 139 VGHSLGARNSVTAAAKYP-----DLVRSVVAIDFTPYIETEALDALEARVNAGSQLFEDI 193
Query: 309 PVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQL 368
V A L YP + + + + P + + +
Sbjct: 194 KAVE--AYLAGRYPNIPADAIRIRAESGYQPVDGGLRP-------------LASSAAMAQ 238
Query: 369 TTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYK 428
T L P+L + G+ + A+ +T +L P+ +
Sbjct: 239 TARGLRSDLVPAYRDV---------TKPVLIVRGESSKLVSAAALAKTSRLRPD--LPVV 287
Query: 429 VFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFL 461
V P HY + + E I F+
Sbjct: 288 VV--PGADHYVNEV------SPEITLKAITNFI 312
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* Length = 271 | Back alignment and structure |
|---|
Score = 51.8 bits (125), Expect = 1e-07
Identities = 35/218 (16%), Positives = 65/218 (29%), Gaps = 50/218 (22%)
Query: 249 IGHSMGG-ILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALN 307
+GHS+G I + A + R + +V + S Y +
Sbjct: 95 VGHSVGALIGMLASIRR------PELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLG--- 145
Query: 308 VPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMM----HPELLKKLVLNNFCTIPAK 363
L ++ Y W A ++ PE+ ++L + FC+
Sbjct: 146 -----LLEMMEKNYI---------GWATVF--AATVLNQPDRPEIKEELE-SRFCSTDPV 188
Query: 364 LILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPED 423
+ Q A R+ + K +P L + D+I P + + LP
Sbjct: 189 IARQFAKAAFFSDHRED---------LSKVTVPSLILQCADDIIAPATVGKYMHQHLPY- 238
Query: 424 LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFL 461
+ K + H H ++ I +L
Sbjct: 239 -SSLKQM--EARGHCPHMS------HPDETIQLIGDYL 267
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} PDB: 1va4_A 3hi4_A 3hea_A Length = 271 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 7e-07
Identities = 44/222 (19%), Positives = 72/222 (32%), Gaps = 48/222 (21%)
Query: 249 IGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNV 308
+G SMGG + ++R G +R+A +V L + P V
Sbjct: 91 VGFSMGGGDVARYIARHG----SARVAGLVLLGAVTPL-----------FGQKPDYPQGV 135
Query: 309 PVVPLGALLT------AAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPA 362
P+ T A + + P+ ++S ++ L
Sbjct: 136 PLDVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQG-------VQTQTLQIALLASL 188
Query: 363 KLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEE-TVKLLP 421
K + TAF E R + K ++P L I GD D I P E + +L+
Sbjct: 189 KATVDCVTAFAETDFRPD---------MAKIDVPTLVIHGDGDQIVPFETTGKVAAELIK 239
Query: 422 EDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463
KV+ PH +Q+ ++ FL R
Sbjct: 240 G--AELKVY--KDAPHGFAVT------HAQQLNEDLLAFLKR 271
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 Length = 274 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 7e-07
Identities = 28/194 (14%), Positives = 61/194 (31%), Gaps = 29/194 (14%)
Query: 249 IGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNV 308
+ HSMGG L + R G GR + + + + P P + +
Sbjct: 91 VAHSMGGGELARYVGRHG-TGRLRSAVLLSAIPPVMIKSDKN-------PDGVPDEVFDA 142
Query: 309 PVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQL 368
+ + + ++ + + N ++ + + ++
Sbjct: 143 LKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNK-------DAFWYMAMAQTIEGGVRC 195
Query: 369 TTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAV-EETVKLLPEDLVTY 427
AF + + K +IP L + GD D + P +A ++ +++P
Sbjct: 196 VDAFGYTDFTED---------LKKFDIPTLVVHGDDDQVVPIDATGRKSAQIIPN--AEL 244
Query: 428 KVFGEPSGPHYAHY 441
KV+ H
Sbjct: 245 KVY--EGSSHGIAM 256
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A Length = 247 | Back alignment and structure |
|---|
Score = 49.0 bits (117), Expect = 8e-07
Identities = 37/254 (14%), Positives = 69/254 (27%), Gaps = 71/254 (27%)
Query: 214 VQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESR 273
V D +DV E+++ + K + G S+GG+
Sbjct: 62 VHTGPDDWW---QDVMNGYEFLKNKGYEK---IAVAGLSLGGVF---------------- 99
Query: 274 LAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPY--VF 331
+LKL VP+ + + Y S Y V
Sbjct: 100 ------------------SLKL---------GYTVPIEGIVTMCAPMYIKSEETMYEGVL 132
Query: 332 SWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIH 391
+ E ++ +++ F P K + L + +DH+
Sbjct: 133 EYAREYKKREGKSEEQIEQEME--KFKQTPMKTLKALQELIAD-----------VRDHLD 179
Query: 392 KCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVE 451
P + D + P++ + + K + H D +
Sbjct: 180 LIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWY--EQSGHVITLDQ-----EKD 232
Query: 452 QVYPCIVQFLGRYD 465
Q++ I FL D
Sbjct: 233 QLHEDIYAFLESLD 246
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* Length = 279 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 1e-06
Identities = 37/217 (17%), Positives = 65/217 (29%), Gaps = 34/217 (15%)
Query: 249 IGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNV 308
+G SMG L ++R G R+A + LAS + + P P + +
Sbjct: 95 VGFSMGTGELARYVARYG----HERVAKLAFLASLEPFLVQRDDN----PEGVPQEVFDG 146
Query: 309 PVVPLGALLTAAYP-LSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQ 367
A + + + L + IS + + N
Sbjct: 147 IEAAAKGDRFAWFTDFYKNFYNLDENLGSRISEQAVTG-------SWNVAIGSAPVAAYA 199
Query: 368 LTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAV-EETVKLLPEDLVT 426
+ A+ E R + P L + G +D I P +A + +PE
Sbjct: 200 VVPAWIED-FRSDVEA------VRAAGKPTLILHGTKDNILPIDATARRFHQAVPE--AD 250
Query: 427 YKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463
Y PH + ++V + FL +
Sbjct: 251 YVEV--EGAPHGLLWT------HADEVNAALKTFLAK 279
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} Length = 330 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 2e-06
Identities = 42/224 (18%), Positives = 74/224 (33%), Gaps = 32/224 (14%)
Query: 249 IGHSMGGIL--LYAML--SRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQ 304
+G S GG+L A+ S LA + AS ++ + L+ LP +
Sbjct: 131 LGQSWGGMLGAEIAVRQPSGL------VSLAICNSPASMRLWSEAAGDLRAQLPAET--R 182
Query: 305 ALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKL 364
A G + Y L ++ + + ++ P+ V
Sbjct: 183 AALDRHEAAGTITHPDY-LQAAAEFYRRHVCRVVP-----TPQDFADSVAQMEAEPTVYH 236
Query: 365 ILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDL 424
+ F G + D + P+L IAG+ D P + V +P+
Sbjct: 237 TMNGPNEFHVVGTLGD---WSVIDRLPDVTAPVLVIAGEHDEATPKTW-QPFVDHIPD-- 290
Query: 425 VTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDSVS 468
V VF + H H + E+ + QFL ++D +
Sbjct: 291 VRSHVFPG-TS-HCTHLE------KPEEFRAVVAQFLHQHDLAA 326
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} Length = 278 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 2e-06
Identities = 32/213 (15%), Positives = 59/213 (27%), Gaps = 30/213 (14%)
Query: 249 IGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNV 308
GHS GG+L + L I+ ++ + + +
Sbjct: 96 AGHSAGGMLALVYATEAQ-----ESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRI-- 148
Query: 309 PVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQL 368
+ A S+ L+ + E L++ + L
Sbjct: 149 ------VSIMNALNDDSTVQEERKALSREWALMSFYSEEKLEEALKLPNSGKTVGNRL-- 200
Query: 369 TTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYK 428
FR+ +D + + + IP G D+ CP E L+P T
Sbjct: 201 -NYFRQVEYKD----YDVRQKLKFVKIPSFIYCGKHDVQCPYIFSCEIANLIPN--ATLT 253
Query: 429 VFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFL 461
F E S H + +++ + L
Sbjct: 254 KFEE-SN-HNPFVE------EIDKFNQFVNDTL 278
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* Length = 398 | Back alignment and structure |
|---|
Score = 48.6 bits (115), Expect = 2e-06
Identities = 34/246 (13%), Positives = 69/246 (28%), Gaps = 27/246 (10%)
Query: 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285
DV + IGHSMGG A + + ++ + +
Sbjct: 119 RDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVL-----QPNLFHLLILIEPVVI 173
Query: 286 YTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMH 345
+ + LP P N+ +L ++ ++ N S H
Sbjct: 174 TRKAIGAGRPGLPPDSPQIPENLYN----SLRLKTCDHFANESEYVKYMRNG-SFFTNAH 228
Query: 346 PELLKKLVLNNFCTIPAKLI----LQLTTAFRE---GGLRDRGGKFFYKDHIHKCNIPIL 398
++L+ ++ ++ + + + F ++ +
Sbjct: 229 SQILQNIIDFERTKASGDDEDGGPVRTKMEQAQNLLCYMNMQTFAPFLISNVKFVRKRTI 288
Query: 399 AIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIV 458
I G + CPP+ K L V P G H + + A + V I
Sbjct: 289 HIVGARSNWCPPQNQLFLQKTLQN--YHLDVI--PGGSHLVNVE------APDLVIERIN 338
Query: 459 QFLGRY 464
+ +
Sbjct: 339 HHIHEF 344
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 Length = 273 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 3e-06
Identities = 36/195 (18%), Positives = 59/195 (30%), Gaps = 28/195 (14%)
Query: 249 IGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNV 308
G S GG + + R G R ++ I + + T + P P + +
Sbjct: 91 FGFSTGGGEVARYIGRHG-TARVAKAGLISAVPPLMLKTEAN-------PGGLPMEVFDG 142
Query: 309 PVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQL 368
A + Y +S P F N + ++ L K
Sbjct: 143 IRQASLADRSQLYKDLASGP--FFGFNQPGAKS---SAGMVDWFWLQGM-AAGHKNAYDC 196
Query: 369 TTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEE-TVKLLPEDLVTY 427
AF E + K ++P L + GD D + P EA + L+ T
Sbjct: 197 IKAFSETDFTEDLKKI---------DVPTLVVHGDADQVVPIEASGIASAALVKG--STL 245
Query: 428 KVFGEPSGPHYAHYD 442
K++ PH
Sbjct: 246 KIY--SGAPHGLTDT 258
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A Length = 276 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 4e-06
Identities = 33/219 (15%), Positives = 62/219 (28%), Gaps = 44/219 (20%)
Query: 249 IGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNV 308
+GHS GG + ++R E + ++ I + L + P +
Sbjct: 94 VGHSTGGGEVVRYMARHP-EDKVAKAVLIAAVPP--------------LMVQTPGNPGGL 138
Query: 309 PVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNF-----CTIPAK 363
P S+ + + E + ++ N + + A
Sbjct: 139 PKSVFDGFQAQV--ASNRAQFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGMIGSAKA- 195
Query: 364 LILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEE-TVKLLPE 422
AF + + P+L + GD D I P E + KLLP
Sbjct: 196 -HYDGIVAFSQTDFTEDLKGI---------QQPVLVMHGDDDQIVPYENSGVLSAKLLPN 245
Query: 423 DLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFL 461
K + PH + + ++ F+
Sbjct: 246 --GALKTY--KGYPHGMPTT------HADVINADLLAFI 274
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} Length = 245 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 5e-06
Identities = 43/287 (14%), Positives = 78/287 (27%), Gaps = 91/287 (31%)
Query: 193 FDLQERLFSTIDDFQKQLDLIVQYD------------WDFDHYLEEDVPAAMEYIRAQSK 240
F E+ D+ + D Y++ +V +
Sbjct: 32 FGELEKYLE---DYN-----CILLDLKGHGESKGQCPSTVYGYID-NVANFITNSEVTKH 82
Query: 241 PKDGKLLAIGHSMGG-ILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPL 299
K+ L IG+SMGG I+L L + + +V+L+
Sbjct: 83 QKNITL--IGYSMGGAIVLGVALKK------LPNVRKVVSLS------------------ 116
Query: 300 ADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMH-----PELLKKLVL 354
A ++ +N + ++ L +
Sbjct: 117 ------------------GGARFDKLDKDFMEKIYHNQLDNNYLLECIGGIDNPLSEKYF 158
Query: 355 NNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVE 414
P +I L A + L D + +IP+ AI +L+ E E
Sbjct: 159 ETLEKDPDIMINDLI-ACKLIDLVDN---------LKNIDIPVKAIVAKDELLTLVEYSE 208
Query: 415 ETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFL 461
K + K+F +G H+ + V I F+
Sbjct: 209 IIKKEVEN--SELKIF--ETGKHFLLVV------NAKGVAEEIKNFI 245
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A Length = 415 | Back alignment and structure |
|---|
Score = 47.7 bits (113), Expect = 5e-06
Identities = 28/234 (11%), Positives = 55/234 (23%), Gaps = 63/234 (26%)
Query: 216 YDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLA 275
+ A + + + ++ IG GG AM+ E ++
Sbjct: 236 SKYPLTEDYSRLHQAVLNELFSIPYVDHHRVGLIGFRFGG---NAMVRLSFLEQE--KIK 290
Query: 276 AIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLN 335
A V L + P+ + + L P L
Sbjct: 291 ACVILGA-----------------------------PIHDIFASPQKLQQMPKMYLDVLA 321
Query: 336 NLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNI 395
+ + + L ++ L+ +G K +
Sbjct: 322 SRLGKSVVDIYSLSGQM--------------------AAWSLKVQG-----FLSSRKTKV 356
Query: 396 PILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMA 449
PILA++ + D + P + K S Y+
Sbjct: 357 PILAMSLEGDPVSPYSDNQMVAFFSTY--GKAKKI--SSKTITQGYEQSLDLAI 406
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 Length = 275 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 5e-06
Identities = 38/215 (17%), Positives = 70/215 (32%), Gaps = 36/215 (16%)
Query: 249 IGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNV 308
IGHS GG + ++R R ++ + + + + + P P + +
Sbjct: 93 IGHSTGGGEVARYVARAEPG-RVAKAVLVSAVPPVMVKSDTN-------PDGLPLEVFDE 144
Query: 309 PVVPLGALLTAAYP-LSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQ 367
L A Y + S P Y F+ +S + ++ A +
Sbjct: 145 FRAALAANRAQFYIDVPSGPFYGFNREGATVS-QGLID------HWWLQGMMGAANAHYE 197
Query: 368 LTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPE-AVEETVKLLPEDLVT 426
AF E D + ++P+L G D + P A ++ +LL T
Sbjct: 198 CIAAFSETDFTDDLKRI---------DVPVLVAHGTDDQVVPYADAAPKSAELLAN--AT 246
Query: 427 YKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFL 461
K + PH E + P ++ F+
Sbjct: 247 LKSY--EGLPHGMLST------HPEVLNPDLLAFV 273
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} Length = 281 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 6e-06
Identities = 37/195 (18%), Positives = 61/195 (31%), Gaps = 28/195 (14%)
Query: 249 IGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNV 308
+G SMGG + +S G R ++ + L + L + ++
Sbjct: 99 VGFSMGGGEVARYISTYG-TDRIEKVVFAGAVPPYLYKSEDHPEGALDDATIETFKSG-- 155
Query: 309 PVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQL 368
+ A + + +L+S E + + K L
Sbjct: 156 ----VINDRLAFLDEFTKGFFAAGDRTDLVS-------ESFRLYNWDIAAGASPKGTLDC 204
Query: 369 TTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPE-AVEETVKLLPEDLVTY 427
TAF + R KF NIP L I GD D P E + + T + +P
Sbjct: 205 ITAFSKTDFRKDLEKF---------NIPTLIIHGDSDATVPFEYSGKLTHEAIPN--SKV 253
Query: 428 KVFGEPSGPHYAHYD 442
+ GPH +
Sbjct: 254 ALI--KGGPHGLNAT 266
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* Length = 298 | Back alignment and structure |
|---|
Score = 46.8 bits (111), Expect = 7e-06
Identities = 27/223 (12%), Positives = 55/223 (24%), Gaps = 33/223 (14%)
Query: 249 IGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNV 308
+G SMG + + RL+++ L + ++ ++ L
Sbjct: 99 VGLSMGATITQVIALD-----HHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPG 153
Query: 309 PVVPLGALLTAAYPLSSSPP-----YVFSWLNNLISAEDMMHPELLKKL--VLNNFCTIP 361
P P L + V W + E + +++ +
Sbjct: 154 PQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVL 213
Query: 362 AKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLP 421
A+ + + + +P L I + D I P + L+P
Sbjct: 214 AEPYAHYSLTLPPPSRAAE---------LREVTVPTLVIQAEHDPIAPAPHGKHLAGLIP 264
Query: 422 E-DLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463
L P H + I+
Sbjct: 265 TARLAEI-----PGMGHALPSS------VHGPLAEVILAHTRS 296
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A Length = 286 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 3e-05
Identities = 22/175 (12%), Positives = 47/175 (26%), Gaps = 32/175 (18%)
Query: 249 IGHSMGGI--LLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQAL 306
+G++MGG L +A+ R+ ++ + L +
Sbjct: 109 VGNAMGGATALNFALE-------YPDRIGKLILMGPG--------------GLGPS---M 144
Query: 307 NVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLIL 366
P+ G L S + L + + ++ ELL+ P L
Sbjct: 145 FAPMPMEGIKLLFKLYAEPSYETLKQMLQVFLYDQSLITEELLQ-GRWEAIQRQPEHL-- 201
Query: 367 QLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLP 421
F + + + + G D P + + + +
Sbjct: 202 ---KNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNID 253
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} Length = 262 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 4e-05
Identities = 29/217 (13%), Positives = 47/217 (21%), Gaps = 48/217 (22%)
Query: 249 IGHSMGGI--LLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQAL 306
G S G LL A + + Y S + AL
Sbjct: 92 FGMSSGAGLSLLAAA--------SGLPITRLAVFEPP--YAVDDSRPPVPPDYQTRLDAL 141
Query: 307 NVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLIL 366
A+ PP + + + M + L
Sbjct: 142 LAEGRRGDAVTYFMTEGVGVPPDLVAQMQQAPMWPGME--------------AVAHTLPY 187
Query: 367 QLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVT 426
R +IP L + G +E +P
Sbjct: 188 DHAVMGDNTIPTARFASI---------SIPTLVMDGGASPAWIRHTAQELADTIPN--AR 236
Query: 427 YKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463
Y + H +A + + P +V+F R
Sbjct: 237 YVTL-----ENQTHT------VAPDAIAPVLVEFFTR 262
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 Length = 258 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 5e-05
Identities = 34/217 (15%), Positives = 62/217 (28%), Gaps = 42/217 (19%)
Query: 249 IGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNV 308
+G S+GG++ + R+ A+VT+ASS +++ + + Q
Sbjct: 79 LGWSLGGLVASQIALT-----HPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLS 133
Query: 309 PVVP--LGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLIL 366
+ L + + L + A M + VLN
Sbjct: 134 DDQQRTVERFLALQTMGTETARQDARALKKTVLALPMPEVD-----VLNGGLE------- 181
Query: 367 QLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVT 426
+ LR + ++P L + G D + P + V KL P
Sbjct: 182 ----ILKTVDLRQP---------LQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPH--SE 226
Query: 427 YKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463
+F H + +V R
Sbjct: 227 SYIF--AKAAHAPFIS------HPAEFCHLLVALKQR 255
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} Length = 289 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 6e-05
Identities = 27/217 (12%), Positives = 60/217 (27%), Gaps = 42/217 (19%)
Query: 249 IGHSMGGI--LLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQAL 306
+G+SMGG + + + R+ +V + S L
Sbjct: 112 LGNSMGGHSSVAFTLK-------WPERVGKLVLMGGGTGGMS-----------------L 147
Query: 307 NVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLIL 366
P+ G + + ++ + + L + LNN + L
Sbjct: 148 FTPMPTEGIKRLNQLYRQPTIENLKLMMDIFVFDTSDLTDALFE-ARLNNMLSRRDHLEN 206
Query: 367 QLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVT 426
+ + + + + L + G D P +A + +
Sbjct: 207 FVKSLEANPKQFPD-----FGPRLAEIKAQTLIVWGRNDRFVPMDAGLRLLSGIAG--SE 259
Query: 427 YKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463
+F H+A ++ + ++ FL R
Sbjct: 260 LHIF--RDCGHWAQWE------HADAFNQLVLNFLAR 288
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A Length = 277 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 7e-05
Identities = 38/217 (17%), Positives = 61/217 (28%), Gaps = 36/217 (16%)
Query: 249 IGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNV 308
+G S G + +S G R +++A + +L L T D A
Sbjct: 95 VGFSTGTGEVARYVSSYG-TARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVA--- 150
Query: 309 PVVPLGALLTAAYPLSSSPPYVFS-WLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQ 367
+ A A Y + Y L IS E + + +
Sbjct: 151 ---AVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAA-------SGGFFAAAA 200
Query: 368 LTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPE-AVEETVKLLPEDLVT 426
T + R + ++P L + G D P E K LP
Sbjct: 201 APTTWYTD-FRADIPRI---------DVPALILHGTGDRTLPIENTARVFHKALPS--AE 248
Query: 427 YKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463
Y PH + E+V ++ FL +
Sbjct: 249 YVEV--EGAPHGLLWT------HAEEVNTALLAFLAK 277
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 Length = 305 | Back alignment and structure |
|---|
Score = 43.5 bits (102), Expect = 8e-05
Identities = 26/228 (11%), Positives = 60/228 (26%), Gaps = 61/228 (26%)
Query: 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285
+ +++ + + I S+ + Y ++S + L+ ++T
Sbjct: 91 NSLCTVYHWLQTK---GTQNIGLIAASLSARVAYEVIS-------DLELSFLITAV---- 136
Query: 286 YTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMH 345
VV L L A Y+ ++ L + D
Sbjct: 137 -----------------------GVVNLRDTLEKAL----GFDYLSLPIDELPNDLDFEG 169
Query: 346 PELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQD 405
+L + F + + + + ++P++A + D
Sbjct: 170 HKLGSE----VFVRDCFEHHWDTLDSTLD--------------KVANTSVPLIAFTANND 211
Query: 406 LICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQV 453
E V + + + H +LV R + V
Sbjct: 212 DWVKQEEVYDMLAHIRTGHCKLYSL--LGSSHDLGENLVVLRNFYQSV 257
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} Length = 270 | Back alignment and structure |
|---|
Score = 42.9 bits (101), Expect = 1e-04
Identities = 31/246 (12%), Positives = 69/246 (28%), Gaps = 66/246 (26%)
Query: 219 DFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIV 278
F ++ V +++ + + + G SMGG L + + IV
Sbjct: 89 TFHDWVA-SVEEGYGWLKQRCQT----IFVTGLSMGGTLTLYLAEH------HPDICGIV 137
Query: 279 TLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLI 338
+ +++D + + + L P Y+ S ++L
Sbjct: 138 PINAAVDIPAIAAGMTGGGEL---------------------------PRYLDSIGSDLK 170
Query: 339 SAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPIL 398
+ + + P +LQL + K + + P L
Sbjct: 171 NPDVKEL----------AYEKTPTASLLQLARLMAQT-----------KAKLDRIVCPAL 209
Query: 399 AIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIV 458
D+D + PP + + + + H A D + +
Sbjct: 210 IFVSDEDHVVPPGNADIIFQGISSTEKEIVRL--RNSYHVATLDY-----DQPMIIERSL 262
Query: 459 QFLGRY 464
+F ++
Sbjct: 263 EFFAKH 268
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A Length = 293 | Back alignment and structure |
|---|
Score = 42.9 bits (102), Expect = 1e-04
Identities = 48/255 (18%), Positives = 89/255 (34%), Gaps = 45/255 (17%)
Query: 217 DWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAA 276
+ D+ +EE E +R++ + K+ +G S GG L A + L
Sbjct: 76 KFTIDYGVEE-----AEALRSKLFGNE-KVFLMGSSYGGALALAYAVKYQ-----DHLKG 124
Query: 277 IVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAY--PLSSSPPY----V 330
++ ++ L +S T+K + L D A + +P Y
Sbjct: 125 LI-VSGGL--SSVPLTVKEMNRLIDELPA------KYRDAIKKYGSSGSYENPEYQEAVN 175
Query: 331 FSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGG-LRDRGGKFFYKDH 389
+ + +L+ +ED PE+LK L + I+ F G ++D + D
Sbjct: 176 YFYHQHLLRSEDW-PPEVLKSLEYAERRNVYR--IMNGPNEFTITGTIKD----WDITDK 228
Query: 390 IHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMA 449
I IP L G+ D + P A + + VF + H ++
Sbjct: 229 ISAIKIPTLITVGEYDEVTPNVA-RVIHEKIAG--SELHVFRD-CS-HLTMWE------D 277
Query: 450 VEQVYPCIVQFLGRY 464
E + F+ ++
Sbjct: 278 REGYNKLLSDFILKH 292
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A Length = 456 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 1e-04
Identities = 40/217 (18%), Positives = 62/217 (28%), Gaps = 36/217 (16%)
Query: 249 IGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNV 308
+G SMG + +S G R + +A + +L L T D A
Sbjct: 96 VGFSMGTGEVARYVSSYG-TARIAAVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAA-- 152
Query: 309 PVVPLGALLTAAYPLSSSPPYVFSW-LNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQ 367
+ A A Y + Y L IS E + + N +
Sbjct: 153 ----VKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNS-------WNTAASGGFFAAAA 201
Query: 368 LTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAV-EETVKLLPEDLVT 426
T + R + ++P L + G D P E K LP
Sbjct: 202 APTTWYTD-FRADIPRI---------DVPALILHGTGDRTLPIENTARVFHKALPS--AE 249
Query: 427 YKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463
Y PH + E+V ++ FL +
Sbjct: 250 YVEV--EGAPHGLLWT------HAEEVNTALLAFLAK 278
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* Length = 273 | Back alignment and structure |
|---|
Score = 42.6 bits (100), Expect = 2e-04
Identities = 32/203 (15%), Positives = 62/203 (30%), Gaps = 26/203 (12%)
Query: 224 LEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASS 283
L + ME + + D K++ +GHS+GG+ L+ + + +
Sbjct: 55 LYDYTLPLMELMESL--SADEKVILVGHSLGGMN--LGLAMEKYPQKIYAAVFLAAFMPD 110
Query: 284 LDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDM 343
+ SS L+ L+ +P G+ + P ++ L L S ED
Sbjct: 111 SVHNSS-FVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGPKFLAHKLYQLCSPED- 168
Query: 344 MHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGD 403
L LV P+ L ++ + + + + I
Sbjct: 169 --LALASSLV------RPSSLFMEDLS------KAKYFTDERFGS------VKRVYIVCT 208
Query: 404 QDLICPPEAVEETVKLLPEDLVT 426
+D P E + +
Sbjct: 209 EDKGIPEEFQRWQIDNIGVTEAI 231
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} Length = 405 | Back alignment and structure |
|---|
Score = 42.8 bits (100), Expect = 2e-04
Identities = 25/240 (10%), Positives = 68/240 (28%), Gaps = 55/240 (22%)
Query: 216 YDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLA 275
F+ + A +++ +A ++ K+ G S GG + ++ R+
Sbjct: 204 QGLHFEVDARAAISAILDWYQAPTE----KIAIAGFSGGGYFTAQAV------EKDKRIK 253
Query: 276 AIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLN 335
A + D + + +A + L+T+ ++ ++W
Sbjct: 254 AWIASTPIYDVAEV-----FRISFSTALKAPKTILKWGSKLVTSVNKVAEVNLNKYAW-- 306
Query: 336 NLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNI 395
+ + +++ + +K ++
Sbjct: 307 ---QFGQVDFITSVNEVL-----------------------------EQAQIVDYNKIDV 334
Query: 396 PILAIAGDQDLICPPEAVEETVKLLPE--DLVTYKVFGEPSG----PHYAHYDLVGGRMA 449
P L + G + + + VT + F SG ++ L+ ++
Sbjct: 335 PSLFLVGAGEDSELMRQSQVLYDNFKQRGIDVTLRKFSSESGADAHCQVNNFRLMHYQVF 394
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* Length = 251 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 2e-04
Identities = 19/98 (19%), Positives = 35/98 (35%), Gaps = 11/98 (11%)
Query: 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGI--LLYAMLSRCGFEGRESRLAAIVTLASS 283
++ A ++Y + + GHS GG+ +L A + + A++ L+ +
Sbjct: 84 TNILAVVDYAKKL--DFVTDIYMAGHSQGGLSVMLAAAM-------ERDIIKALIPLSPA 134
Query: 284 LDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAY 321
T +LL DP + G L Y
Sbjct: 135 AMIPEIARTGELLGLKFDPENIPDELDAWDGRKLKGNY 172
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} Length = 269 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 2e-04
Identities = 27/175 (15%), Positives = 59/175 (33%), Gaps = 31/175 (17%)
Query: 249 IGHSMGGI--LLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQAL 306
G+SMGG L YA+ ++ ++ ++S + +L L D A+A
Sbjct: 88 FGYSMGGRVALYYAINGH-------IPISNLILESTSPGIKEEAN--QLERRLVDDARAK 138
Query: 307 NVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLIL 366
+ + + + W + + P ++ + + +
Sbjct: 139 VLDIAGIELFVND-------------WEKLPLFQSQLELPVEIQHQIRQQRLSQSPHKMA 185
Query: 367 QLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLP 421
+ A R+ G + + +P L +AG+ D A ++ L+P
Sbjct: 186 K---ALRDYGTGQM---PNLWPRLKEIKVPTLILAGEYDEKFVQIA-KKMANLIP 233
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A Length = 293 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 3e-04
Identities = 29/217 (13%), Positives = 56/217 (25%), Gaps = 43/217 (19%)
Query: 249 IGHSMGG-ILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALN 307
+G SMG I M+ +++ V +A+ L Q N
Sbjct: 115 VGVSMGAFIAQELMVVA------PELVSSAVLMATRG-------------RLDRARQFFN 155
Query: 308 VPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQ 367
L P + + + +D+ + + + + P +
Sbjct: 156 KAEAELYDSGVQLPPTYDARARLLENFSRKTLNDDVAVGDWIAMFSMWPIKSTPG--LRC 213
Query: 368 LTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPE-DLVT 426
+ P+L I D++ PP E LP +
Sbjct: 214 QLDCAPQTNRLPA---------YRNIAAPVLVIGFADDVVTPPYLGREVADALPNGRYLQ 264
Query: 427 YKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463
P H ++ E V +++F
Sbjct: 265 I-----PDAGHLGFFE------RPEAVNTAMLKFFAS 290
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} Length = 286 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 3e-04
Identities = 44/258 (17%), Positives = 70/258 (27%), Gaps = 68/258 (26%)
Query: 217 DWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAI------GHSMGGILLYAMLSRCGFEGR 270
+ D +E+ + L + H G ++ +L R
Sbjct: 75 LFTVDALVED-----TLLLAEA--------LGVERFGLLAHGFGAVVALEVLRR-----F 116
Query: 271 ESRLAAIVTLASSLDYTSSKSTLKL---LLPLADPAQAL--NVPVVPLGALLTAAYPLSS 325
AI+ LA +++ + L L PL DP + L + AL +
Sbjct: 117 PQAEGAIL-LAPWVNFPWLAARLAEAAGLAPLPDPEENLKEALKREEPKALFDRLMFPTP 175
Query: 326 SPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFF 385
+ WL P L AF GL
Sbjct: 176 RGRMAYEWLAEGAGILGSDAPGL----------------------AFLRNGLWR----LD 209
Query: 386 YKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVG 445
Y ++ P+ + G++D P A E L + V +G HY D
Sbjct: 210 YTPYLTPERRPLYVLVGERDGTSYPYAEEV-ASRLRAPIR---VL-PEAG-HYLWID--- 260
Query: 446 GRMAVEQVYPCIVQFLGR 463
A E + L
Sbjct: 261 ---APEAFEEAFKEALAA 275
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A Length = 291 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 4e-04
Identities = 24/173 (13%), Positives = 59/173 (34%), Gaps = 26/173 (15%)
Query: 249 IGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNV 308
+G+++GG +R +V + + L
Sbjct: 111 VGNALGGGTAVRFALD-----YPARAGRLVLMGPGGLSIN-----------------LFA 148
Query: 309 PVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQL 368
P G + + ++ + + ++L ++ ++++ PEL+ + + P L
Sbjct: 149 PDPTEGVKRLSKFSVAPTRENLEAFLRVMVYDKNLITPELVDQRF--ALASTPESLTATR 206
Query: 369 TTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLP 421
G G + +++ P+L I G +D + P + +K +P
Sbjct: 207 AMGKSFAGADFEAGMMW--REVYRLRQPVLLIWGREDRVNPLDGALVALKTIP 257
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} Length = 367 | Back alignment and structure |
|---|
Score = 40.8 bits (95), Expect = 7e-04
Identities = 37/243 (15%), Positives = 60/243 (24%), Gaps = 33/243 (13%)
Query: 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSM-GGILLYAMLSRCGFEGRESRLAAIVTLASSL 284
ED AA+++I + ++ IG GG+ L A+ + R+ A+VT
Sbjct: 153 EDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAV-------AVDKRVKAVVTSTMYD 205
Query: 285 DYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAE--D 342
+ L + L + P P + D
Sbjct: 206 MTRVMSKGYNDSVTLEQRTRTLEQLGQQRWKDAESGTPAYQPPYNELKGGEAQFLVDYHD 265
Query: 343 MMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHK-CNIPILAIA 401
N +I + PIL I
Sbjct: 266 YYMTPRGYHPRAVNSGNAWTMTTPLSFMNMPIL------------TYIKEISPRPILLIH 313
Query: 402 GDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFL 461
G++ E E V P H YD R+ ++ I F
Sbjct: 314 GERA--HSRYFSETAYAAAAEPKELLIV---PGASHVDLYD-RLDRIPFDR----IAGFF 363
Query: 462 GRY 464
+
Sbjct: 364 DEH 366
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 468 | |||
| 4fbl_A | 281 | LIPS lipolytic enzyme; thermostable, structural ge | 99.9 | |
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 99.87 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 99.85 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 99.84 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 99.84 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 99.84 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 99.84 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 99.83 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 99.83 | |
| 1k8q_A | 377 | Triacylglycerol lipase, gastric; APHA beta hydrola | 99.83 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 99.83 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 99.83 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 99.83 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 99.83 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 99.83 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 99.82 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 99.82 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 99.82 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 99.82 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 99.82 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 99.82 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 99.82 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 99.82 | |
| 4dnp_A | 269 | DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu | 99.82 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 99.82 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 99.81 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 99.81 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 99.81 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 99.81 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 99.81 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 99.81 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 99.81 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 99.81 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 99.8 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 99.8 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 99.8 | |
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 99.8 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 99.8 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 99.8 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 99.8 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 99.8 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 99.8 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 99.8 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 99.8 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 99.8 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 99.8 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 99.8 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 99.79 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 99.79 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 99.79 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 99.78 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 99.78 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 99.78 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 99.78 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 99.78 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 99.78 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 99.78 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 99.77 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 99.77 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 99.77 | |
| 4g9e_A | 279 | AHL-lactonase, alpha/beta hydrolase fold protein; | 99.77 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.76 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 99.76 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 99.76 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 99.75 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 99.75 | |
| 3i1i_A | 377 | Homoserine O-acetyltransferase; structural genomic | 99.74 | |
| 2pl5_A | 366 | Homoserine O-acetyltransferase; alpha/beta hydrola | 99.73 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 99.73 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 99.73 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 99.73 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 99.73 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 99.72 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 99.72 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 99.72 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 99.72 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 99.72 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 99.71 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 99.71 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 99.71 | |
| 1jfr_A | 262 | Lipase; serine hydrolase; 1.90A {Streptomyces exfo | 99.7 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 99.7 | |
| 2vat_A | 444 | Acetyl-COA--deacetylcephalosporin C acetyltransfer | 99.7 | |
| 2b61_A | 377 | Homoserine O-acetyltransferase; acyl-enzyme, aspar | 99.7 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 99.7 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 99.69 | |
| 1zi8_A | 236 | Carboxymethylenebutenolidase; alpha and beta prote | 99.69 | |
| 3f67_A | 241 | Putative dienelactone hydrolase; alpha-beta-alpha | 99.69 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 99.52 | |
| 1pja_A | 302 | Palmitoyl-protein thioesterase 2 precursor; hydrol | 99.68 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 99.67 | |
| 2i3d_A | 249 | AGR_C_3351P, hypothetical protein ATU1826; structu | 99.67 | |
| 3trd_A | 208 | Alpha/beta hydrolase; cellular processes; 1.50A {C | 99.67 | |
| 3fla_A | 267 | RIFR; alpha-beta hydrolase thioesterase, hydrolase | 99.66 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 99.66 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 99.65 | |
| 3vis_A | 306 | Esterase; alpha/beta-hydrolase fold, polyethylene | 99.65 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 99.65 | |
| 2qs9_A | 194 | Retinoblastoma-binding protein 9; B5T overexpresse | 99.65 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 99.64 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 99.64 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 99.63 | |
| 2fuk_A | 220 | XC6422 protein; A/B hydrolase, structural genomics | 99.63 | |
| 1uxo_A | 192 | YDEN protein; hydrolase, A/B hydrolase, esterase, | 99.62 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 99.62 | |
| 3h04_A | 275 | Uncharacterized protein; protein with unknown func | 99.62 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 99.62 | |
| 4ao6_A | 259 | Esterase; hydrolase, thermo label; 1.60A {Unidenti | 99.61 | |
| 3qmv_A | 280 | Thioesterase, REDJ; alpha/beta hydrolase fold, hyd | 99.61 | |
| 1auo_A | 218 | Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl | 99.61 | |
| 2hdw_A | 367 | Hypothetical protein PA2218; alpha/beta hydrolase | 99.6 | |
| 3hxk_A | 276 | Sugar hydrolase; alpha-beta protein., structural g | 99.6 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 99.6 | |
| 1fj2_A | 232 | Protein (acyl protein thioesterase 1); alpha/beta | 99.6 | |
| 2fx5_A | 258 | Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pse | 99.59 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 99.59 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.58 | |
| 2pbl_A | 262 | Putative esterase/lipase/thioesterase; alpha/beta- | 99.58 | |
| 2r8b_A | 251 | AGR_C_4453P, uncharacterized protein ATU2452; APC6 | 99.57 | |
| 4i19_A | 388 | Epoxide hydrolase; structural genomics, PSI-biolog | 99.57 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 99.57 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.57 | |
| 3lp5_A | 250 | Putative cell surface hydrolase; structural genom | 99.57 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 99.56 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.56 | |
| 3bxp_A | 277 | Putative lipase/esterase; putative carboxylesteras | 99.56 | |
| 2q0x_A | 335 | Protein DUF1749, uncharacterized protein; alpha/be | 99.56 | |
| 3bjr_A | 283 | Putative carboxylesterase; structural genomics, jo | 99.56 | |
| 3cn9_A | 226 | Carboxylesterase; alpha/beta hydrolase fold super- | 99.55 | |
| 3bdv_A | 191 | Uncharacterized protein DUF1234; DUF1234 family pr | 99.55 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 99.54 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 99.54 | |
| 2h1i_A | 226 | Carboxylesterase; structural genomics, PSI-2, prot | 99.53 | |
| 4fle_A | 202 | Esterase; structural genomics, PSI-biology, northe | 99.53 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 99.52 | |
| 3og9_A | 209 | Protein YAHD A copper inducible hydrolase; alpha/b | 99.52 | |
| 1qlw_A | 328 | Esterase; anisotropic refinement, atomic resolutio | 99.51 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.51 | |
| 2zsh_A | 351 | Probable gibberellin receptor GID1L1; plant hormon | 99.51 | |
| 3d7r_A | 326 | Esterase; alpha/beta fold, hydrolase; 2.01A {Staph | 99.51 | |
| 2c7b_A | 311 | Carboxylesterase, ESTE1; carboxyesterase, thermoph | 99.49 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 99.48 | |
| 2k2q_B | 242 | Surfactin synthetase thioesterase subunit; A/B-hyd | 99.47 | |
| 3b5e_A | 223 | MLL8374 protein; NP_108484.1, carboxylesterase, st | 99.47 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.47 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.46 | |
| 3fle_A | 249 | SE_1780 protein; structural genomics, APC61035.1, | 99.46 | |
| 3ils_A | 265 | PKS, aflatoxin biosynthesis polyketide synthase; A | 99.44 | |
| 2o7r_A | 338 | CXE carboxylesterase; alpha/beta hydrolase; 1.40A | 99.44 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.42 | |
| 3k6k_A | 322 | Esterase/lipase; alpha/beta hydrolase fold; 2.20A | 99.42 | |
| 2hm7_A | 310 | Carboxylesterase; alpha/beta hydrolase fold, hydro | 99.42 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.42 | |
| 4e15_A | 303 | Kynurenine formamidase; alpha/beta hydrolase fold, | 99.42 | |
| 3u0v_A | 239 | Lysophospholipase-like protein 1; alpha, beta hydr | 99.42 | |
| 1jkm_A | 361 | Brefeldin A esterase; serine hydrolase, degradatio | 99.41 | |
| 3g02_A | 408 | Epoxide hydrolase; alpha/beta hydrolase fold, enan | 99.41 | |
| 3ga7_A | 326 | Acetyl esterase; phosphoserine, IDP00896, hydrolas | 99.41 | |
| 3ds8_A | 254 | LIN2722 protein; unkonwn function, structural geno | 99.4 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.4 | |
| 1kez_A | 300 | Erythronolide synthase; polyketide synthase, modul | 99.4 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.39 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.38 | |
| 3ain_A | 323 | 303AA long hypothetical esterase; carboxylesterase | 99.38 | |
| 1lzl_A | 323 | Heroin esterase; alpha/beta hydrolase; 1.30A {Rhod | 99.38 | |
| 3d59_A | 383 | Platelet-activating factor acetylhydrolase; secret | 99.38 | |
| 1lns_A | 763 | X-prolyl dipeptidyl aminopetidase; alpha beta hydr | 99.37 | |
| 3fak_A | 322 | Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Unc | 99.37 | |
| 4h0c_A | 210 | Phospholipase/carboxylesterase; PSI-biology, midwe | 99.36 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 99.36 | |
| 3lcr_A | 319 | Tautomycetin biosynthetic PKS; alpha-beta hydrolas | 99.35 | |
| 1ycd_A | 243 | Hypothetical 27.3 kDa protein in AAP1-SMF2 interge | 99.34 | |
| 2wir_A | 313 | Pesta, alpha/beta hydrolase fold-3 domain protein; | 99.34 | |
| 3ebl_A | 365 | Gibberellin receptor GID1; alpha/beta hydrolase, l | 99.34 | |
| 3fcx_A | 282 | FGH, esterase D, S-formylglutathione hydrolase; re | 99.33 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 99.32 | |
| 1jji_A | 311 | Carboxylesterase; alpha-beta hydrolase fold, hydro | 99.29 | |
| 3qh4_A | 317 | Esterase LIPW; structural genomics, ssgcid, seattl | 99.29 | |
| 3e4d_A | 278 | Esterase D; S-formylglutathione hydrolase, hydrola | 99.28 | |
| 2qru_A | 274 | Uncharacterized protein; alpha/beta-hydrolase, str | 99.27 | |
| 4fhz_A | 285 | Phospholipase/carboxylesterase; alpha/beta hydrola | 99.26 | |
| 3i6y_A | 280 | Esterase APC40077; lipase, structural genomics, PS | 99.26 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 99.18 | |
| 2hfk_A | 319 | Pikromycin, type I polyketide synthase pikaiv; alp | 99.18 | |
| 2uz0_A | 263 | Esterase, tributyrin esterase; alpha/beta hydrolas | 99.17 | |
| 3ls2_A | 280 | S-formylglutathione hydrolase; psychrophilic organ | 99.15 | |
| 4ezi_A | 377 | Uncharacterized protein; alpha-beta hydrolases fol | 99.14 | |
| 1ei9_A | 279 | Palmitoyl protein thioesterase 1; alpha/beta hydro | 99.14 | |
| 1jmk_C | 230 | SRFTE, surfactin synthetase; thioesterase, non-rib | 99.12 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 99.12 | |
| 1tca_A | 317 | Lipase; hydrolase(carboxylic esterase); HET: NAG; | 99.09 | |
| 3tjm_A | 283 | Fatty acid synthase; thioesterase domain, fatty ac | 99.09 | |
| 4b6g_A | 283 | Putative esterase; hydrolase, formaldehyde detoxif | 99.08 | |
| 1jjf_A | 268 | Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-x | 99.05 | |
| 3h2g_A | 397 | Esterase; xanthomonas oryzae PV. oryzae, cell WALL | 99.05 | |
| 2cb9_A | 244 | Fengycin synthetase; thioesterase, non-ribosomal p | 99.02 | |
| 3i2k_A | 587 | Cocaine esterase; alpha/beta hydrolase, hydrolase; | 98.97 | |
| 3guu_A | 462 | Lipase A; protein structure, hydrolase; HET: 1PE; | 98.95 | |
| 4f21_A | 246 | Carboxylesterase/phospholipase family protein; str | 98.94 | |
| 1mpx_A | 615 | Alpha-amino acid ester hydrolase; alpha/beta hydro | 98.93 | |
| 3d0k_A | 304 | Putative poly(3-hydroxybutyrate) depolymerase LPQ; | 98.91 | |
| 3iii_A | 560 | COCE/NOND family hydrolase; structural genomics, c | 98.84 | |
| 2b9v_A | 652 | Alpha-amino acid ester hydrolase; catalytic triad, | 98.82 | |
| 1dqz_A | 280 | 85C, protein (antigen 85-C); fibronectin, structur | 98.69 | |
| 1sfr_A | 304 | Antigen 85-A; alpha/beta hydrolase, structural gen | 98.68 | |
| 3icv_A | 316 | Lipase B, CALB; circular permutation, cleavage on | 98.63 | |
| 1r88_A | 280 | MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBP | 98.58 | |
| 1ex9_A | 285 | Lactonizing lipase; alpha-beta hydrolase fold, pho | 98.55 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 98.54 | |
| 1ys1_X | 320 | Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h | 98.54 | |
| 1bu8_A | 452 | Protein (pancreatic lipase related protein 2); hyd | 98.51 | |
| 1w52_X | 452 | Pancreatic lipase related protein 2; detergent, cl | 98.51 | |
| 1gpl_A | 432 | RP2 lipase; serine esterase, hydrolase, lipid degr | 98.5 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 98.42 | |
| 1gkl_A | 297 | Endo-1,4-beta-xylanase Y; hydrolase, esterase fami | 98.39 | |
| 2x5x_A | 342 | PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE | 98.37 | |
| 1hpl_A | 449 | Lipase; hydrolase(carboxylic esterase); 2.30A {Equ | 98.37 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 98.36 | |
| 2qm0_A | 275 | BES; alpha-beta structure, structural genomics, PS | 98.36 | |
| 2zyr_A | 484 | Lipase, putative; fatty acid, hydrolase; HET: 1PE; | 98.35 | |
| 1rp1_A | 450 | Pancreatic lipase related protein 1; hydrolase, li | 98.31 | |
| 3c8d_A | 403 | Enterochelin esterase; alpha-beta-alpha sandwich, | 98.2 | |
| 3n2z_B | 446 | Lysosomal Pro-X carboxypeptidase; alpha/beta hydro | 98.19 | |
| 2px6_A | 316 | Thioesterase domain; thioesaterse domain, orlistat | 98.1 | |
| 2hih_A | 431 | Lipase 46 kDa form; A1 phospholipase, phospholipid | 98.05 | |
| 2dsn_A | 387 | Thermostable lipase; T1 lipase, hydrolase; 1.50A { | 97.92 | |
| 2dst_A | 131 | Hypothetical protein TTHA1544; conserved hypotheti | 97.87 | |
| 3gff_A | 331 | IROE-like serine hydrolase; NP_718593.1, structura | 97.75 | |
| 3pic_A | 375 | CIP2; alpha/beta hydrolase fold, glucuronoyl ester | 97.73 | |
| 2gzs_A | 278 | IROE protein; enterobactin, salmochelin, DFP, hydr | 97.62 | |
| 4g4g_A | 433 | 4-O-methyl-glucuronoyl methylesterase; alpha/beta | 97.61 | |
| 1tib_A | 269 | Lipase; hydrolase(carboxylic esterase); 1.84A {The | 96.44 | |
| 4fol_A | 299 | FGH, S-formylglutathione hydrolase; D-type esteras | 96.41 | |
| 1tgl_A | 269 | Triacyl-glycerol acylhydrolase; carboxylic esteras | 95.99 | |
| 1uwc_A | 261 | Feruloyl esterase A; hydrolase, serine esterase, x | 95.87 | |
| 1tia_A | 279 | Lipase; hydrolase(carboxylic esterase); 2.10A {Pen | 95.85 | |
| 2ogt_A | 498 | Thermostable carboxylesterase EST50; alpha/beta hy | 95.74 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 95.37 | |
| 1lgy_A | 269 | Lipase, triacylglycerol lipase; hydrolase (carboxy | 95.34 | |
| 1whs_B | 153 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 95.16 | |
| 1qe3_A | 489 | PNB esterase, para-nitrobenzyl esterase; alpha-bet | 94.89 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 94.72 | |
| 2fj0_A | 551 | JuvenIle hormone esterase; manduca sexta, alpha-be | 94.47 | |
| 3uue_A | 279 | LIP1, secretory lipase (family 3); LID-domain, hyd | 94.37 | |
| 3g7n_A | 258 | Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A | 94.11 | |
| 3ngm_A | 319 | Extracellular lipase; secret lipase, hydrolase; 2. | 93.8 | |
| 3qpa_A | 197 | Cutinase; alpha-beta hydrolase fold, esterase, hyd | 92.7 | |
| 1p0i_A | 529 | Cholinesterase; serine hydrolase, butyrate, hydrol | 92.63 | |
| 3o0d_A | 301 | YALI0A20350P, triacylglycerol lipase; alpha/beta-h | 92.52 | |
| 2ha2_A | 543 | ACHE, acetylcholinesterase; hydrolase fold, serine | 92.37 | |
| 2h7c_A | 542 | Liver carboxylesterase 1; enzyme, cholesteryl este | 92.23 | |
| 4ebb_A | 472 | Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2 | 92.2 | |
| 1ea5_A | 537 | ACHE, acetylcholinesterase; hydrolase, serine hydr | 92.0 | |
| 4az3_B | 155 | Lysosomal protective protein 20 kDa chain; hydrola | 91.87 | |
| 3dcn_A | 201 | Cutinase, cutin hydrolase; catalytic triad, secret | 91.34 | |
| 1g66_A | 207 | Acetyl xylan esterase II; serine hydrolase, acetyl | 91.24 | |
| 1thg_A | 544 | Lipase; hydrolase(carboxylic esterase); HET: NAG N | 91.1 | |
| 1qoz_A | 207 | AXE, acetyl xylan esterase; hydrolase, xylan degra | 90.62 | |
| 1llf_A | 534 | Lipase 3; candida cylindracea cholesterol esterase | 90.45 | |
| 1dx4_A | 585 | ACHE, acetylcholinesterase; hydrolase, serine este | 90.12 | |
| 3qpd_A | 187 | Cutinase 1; alpha-beta hydrolase fold, esterase, h | 90.05 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 89.1 | |
| 3hc7_A | 254 | Gene 12 protein, GP12; alpha/beta sandwich, cell a | 89.03 | |
| 1ukc_A | 522 | ESTA, esterase; fungi, A/B hydrolase fold, acetylc | 88.92 | |
| 1gxs_B | 158 | P-(S)-hydroxymandelonitrIle lyase chain B; inhibit | 88.24 | |
| 2czq_A | 205 | Cutinase-like protein; alpha/beta hydrolase fold, | 88.22 | |
| 3bix_A | 574 | Neuroligin-1, neuroligin I; esterase domain, alpha | 88.16 | |
| 2ory_A | 346 | Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Ph | 87.96 | |
| 3aja_A | 302 | Putative uncharacterized protein; alpha-beta hydro | 87.6 | |
| 2bce_A | 579 | Cholesterol esterase; hydrolase, serine esterase, | 86.91 |
| >4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2.4e-23 Score=201.97 Aligned_cols=230 Identities=18% Similarity=0.202 Sum_probs=154.8
Q ss_pred ccccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHH
Q 012210 155 SSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEY 234 (468)
Q Consensus 155 ~~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~ 234 (468)
.++|-.|++.|-...++.+++.|+ .+||+|+++|+.||+.. ...+ ..+++.++. +|+.+++++
T Consensus 52 ~~VlllHG~~~s~~~~~~la~~La---~~Gy~Via~Dl~GhG~S----~~~~---------~~~~~~~~~-~d~~~~~~~ 114 (281)
T 4fbl_A 52 IGVLVSHGFTGSPQSMRFLAEGFA---RAGYTVATPRLTGHGTT----PAEM---------AASTASDWT-ADIVAAMRW 114 (281)
T ss_dssp EEEEEECCTTCCGGGGHHHHHHHH---HTTCEEEECCCTTSSSC----HHHH---------HTCCHHHHH-HHHHHHHHH
T ss_pred ceEEEECCCCCCHHHHHHHHHHHH---HCCCEEEEECCCCCCCC----Cccc---------cCCCHHHHH-HHHHHHHHH
Confidence 344555666666677889999999 99999999999999763 1111 133567776 999999999
Q ss_pred HHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchH
Q 012210 235 IRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLG 314 (468)
Q Consensus 235 l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (468)
++... ++++++||||||.+++.+|.++ |++|+++|+++++............+...... ......
T Consensus 115 l~~~~----~~v~lvG~S~GG~ia~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----- 179 (281)
T 4fbl_A 115 LEERC----DVLFMTGLSMGGALTVWAAGQF-----PERFAGIMPINAALRMESPDLAALAFNPDAPA-ELPGIG----- 179 (281)
T ss_dssp HHHHC----SEEEEEEETHHHHHHHHHHHHS-----TTTCSEEEEESCCSCCCCHHHHHHHTCTTCCS-EEECCC-----
T ss_pred HHhCC----CeEEEEEECcchHHHHHHHHhC-----chhhhhhhcccchhcccchhhHHHHHhHhhHH-hhhcch-----
Confidence 97653 3899999999999999999998 89999999999876654322111111100000 000000
Q ss_pred hHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccC
Q 012210 315 ALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCN 394 (468)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~ 394 (468)
... ..+.... ......+...+.++..... .....+.+|+
T Consensus 180 -------~~~--------------------~~~~~~~---~~~~~~~~~~~~~~~~~~~-----------~~~~~l~~i~ 218 (281)
T 4fbl_A 180 -------SDI--------------------KAEGVKE---LAYPVTPVPAIKHLITIGA-----------VAEMLLPRVK 218 (281)
T ss_dssp -------CCC--------------------SSTTCCC---CCCSEEEGGGHHHHHHHHH-----------HHHHHGGGCC
T ss_pred -------hhh--------------------hhHHHHH---hhhccCchHHHHHHHHhhh-----------hccccccccC
Confidence 000 0000000 0000001111111111110 0124578899
Q ss_pred ccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 395 IPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 395 vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
+|+|+|+|++|.++|++.++.+++.+++..++++++ |+++|..+.+ .+++++.+.|.+||++|
T Consensus 219 ~P~Lii~G~~D~~v~~~~~~~l~~~l~~~~~~l~~~--~~~gH~~~~e-----~~~e~v~~~i~~FL~~H 281 (281)
T 4fbl_A 219 CPALIIQSREDHVVPPHNGELIYNGIGSTEKELLWL--ENSYHVATLD-----NDKELILERSLAFIRKH 281 (281)
T ss_dssp SCEEEEEESSCSSSCTHHHHHHHHHCCCSSEEEEEE--SSCCSCGGGS-----TTHHHHHHHHHHHHHTC
T ss_pred CCEEEEEeCCCCCcCHHHHHHHHHhCCCCCcEEEEE--CCCCCcCccc-----cCHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999887888888 9999998886 35899999999999987
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.87 E-value=3.9e-21 Score=184.59 Aligned_cols=225 Identities=12% Similarity=0.124 Sum_probs=143.1
Q ss_pred cchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEE
Q 012210 168 IQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLL 247 (468)
Q Consensus 168 ~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~ 247 (468)
..++.+...|+ .+|+|+++|+.|++..-. ...+|++++++ +|+.++++.+... +++
T Consensus 41 ~~w~~~~~~L~----~~~~vi~~D~rG~G~S~~-------------~~~~~~~~~~a-~dl~~~l~~l~~~------~~~ 96 (266)
T 3om8_A 41 HMWDAQLPALT----RHFRVLRYDARGHGASSV-------------PPGPYTLARLG-EDVLELLDALEVR------RAH 96 (266)
T ss_dssp GGGGGGHHHHH----TTCEEEEECCTTSTTSCC-------------CCSCCCHHHHH-HHHHHHHHHTTCS------CEE
T ss_pred HHHHHHHHHhh----cCcEEEEEcCCCCCCCCC-------------CCCCCCHHHHH-HHHHHHHHHhCCC------ceE
Confidence 44566666666 589999999999976311 01245788887 9999999887543 899
Q ss_pred EEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCc
Q 012210 248 AIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSP 327 (468)
Q Consensus 248 lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (468)
++||||||.+++.+|.++ |++|+++|++++.............+... ...... ......
T Consensus 97 lvGhS~Gg~va~~~A~~~-----P~rv~~lvl~~~~~~~~~~~~~~~~~~~~------~~~~~~--~~~~~~-------- 155 (266)
T 3om8_A 97 FLGLSLGGIVGQWLALHA-----PQRIERLVLANTSAWLGPAAQWDERIAAV------LQAEDM--SETAAG-------- 155 (266)
T ss_dssp EEEETHHHHHHHHHHHHC-----GGGEEEEEEESCCSBCCCSHHHHHHHHHH------HHCSSS--HHHHHH--------
T ss_pred EEEEChHHHHHHHHHHhC-----hHhhheeeEecCcccCCchhHHHHHHHHH------HccccH--HHHHHH--------
Confidence 999999999999999998 99999999998765433221111110000 000000 000000
Q ss_pred hhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecCCCCc
Q 012210 328 PYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLI 407 (468)
Q Consensus 328 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~D~i 407 (468)
.+..|+...... ..++..+.+.... ...+...+......+. ..++...+.+|++|+|+|+|++|.+
T Consensus 156 -~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---------~~d~~~~l~~i~~P~Lvi~G~~D~~ 221 (266)
T 3om8_A 156 -FLGNWFPPALLE---RAEPVVERFRAML-MATNRHGLAGSFAAVR---------DTDLRAQLARIERPTLVIAGAYDTV 221 (266)
T ss_dssp -HHHHHSCHHHHH---SCCHHHHHHHHHH-HTSCHHHHHHHHHHHH---------TCBCTTTGGGCCSCEEEEEETTCSS
T ss_pred -HHHHhcChhhhh---cChHHHHHHHHHH-HhCCHHHHHHHHHHhh---------ccchhhHhcCCCCCEEEEEeCCCCC
Confidence 001111100000 0112222211111 1122222222222222 1234567899999999999999999
Q ss_pred CCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 012210 408 CPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 462 (468)
Q Consensus 408 vp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~ 462 (468)
+|++.++.+.+.+|++ +++++ + +||+.|.| .|++|.+.|.+||.
T Consensus 222 ~~~~~~~~l~~~ip~a--~~~~i--~-~gH~~~~e------~p~~~~~~i~~Fl~ 265 (266)
T 3om8_A 222 TAASHGELIAASIAGA--RLVTL--P-AVHLSNVE------FPQAFEGAVLSFLG 265 (266)
T ss_dssp SCHHHHHHHHHHSTTC--EEEEE--S-CCSCHHHH------CHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHhCCCC--EEEEe--C-CCCCcccc------CHHHHHHHHHHHhc
Confidence 9999999999999998 88888 6 79999998 99999999999996
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A | Back alignment and structure |
|---|
Probab=99.85 E-value=8.2e-20 Score=173.21 Aligned_cols=227 Identities=15% Similarity=0.189 Sum_probs=143.8
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|++.|-...++.+++.|+ .+||+|+++|+.|++.. .... ..+++.++. +|+.++++.+.
T Consensus 19 vvllHG~~~~~~~~~~~~~~L~---~~g~~vi~~D~~GhG~s----~~~~---------~~~~~~~~~-~d~~~~~~~l~ 81 (247)
T 1tqh_A 19 VLLLHGFTGNSADVRMLGRFLE---SKGYTCHAPIYKGHGVP----PEEL---------VHTGPDDWW-QDVMNGYEFLK 81 (247)
T ss_dssp EEEECCTTCCTHHHHHHHHHHH---HTTCEEEECCCTTSSSC----HHHH---------TTCCHHHHH-HHHHHHHHHHH
T ss_pred EEEECCCCCChHHHHHHHHHHH---HCCCEEEecccCCCCCC----HHHh---------cCCCHHHHH-HHHHHHHHHHH
Confidence 4444555555566677777777 88999999999999741 1110 124666775 78888887776
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhH
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAL 316 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
.. +.. +++++||||||.+++.+|.++ | |+++|+++++............+ ...
T Consensus 82 ~~-~~~--~~~lvG~SmGG~ia~~~a~~~-----p--v~~lvl~~~~~~~~~~~~~~~~~-----------------~~~ 134 (247)
T 1tqh_A 82 NK-GYE--KIAVAGLSLGGVFSLKLGYTV-----P--IEGIVTMCAPMYIKSEETMYEGV-----------------LEY 134 (247)
T ss_dssp HH-TCC--CEEEEEETHHHHHHHHHHTTS-----C--CSCEEEESCCSSCCCHHHHHHHH-----------------HHH
T ss_pred Hc-CCC--eEEEEEeCHHHHHHHHHHHhC-----C--CCeEEEEcceeecCcchhhhHHH-----------------HHH
Confidence 54 333 899999999999999999885 5 99999987654321110000000 000
Q ss_pred HHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCcc
Q 012210 317 LTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIP 396 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP 396 (468)
.. .+.. .. ....+......... ...+...+..+.... .+....+.+|++|
T Consensus 135 ~~-------------~~~~-~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----------~~~~~~l~~i~~P 184 (247)
T 1tqh_A 135 AR-------------EYKK-RE----GKSEEQIEQEMEKF-KQTPMKTLKALQELI-----------ADVRDHLDLIYAP 184 (247)
T ss_dssp HH-------------HHHH-HH----TCCHHHHHHHHHHH-TTSCCTTHHHHHHHH-----------HHHHHTGGGCCSC
T ss_pred HH-------------Hhhc-cc----ccchHHHHhhhhcc-cCCCHHHHHHHHHHH-----------HHHHhhcccCCCC
Confidence 00 0000 00 01111111111111 000101111111100 0123567889999
Q ss_pred EEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 397 ILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 397 vLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
+|+|+|++|.++|++.++.+.+.+++...+++++ ++++|+.+.+ +.|+++.+.|.+||++.
T Consensus 185 ~Lii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~--~~~gH~~~~e-----~~~~~~~~~i~~Fl~~~ 245 (247)
T 1tqh_A 185 TFVVQARHDEMINPDSANIIYNEIESPVKQIKWY--EQSGHVITLD-----QEKDQLHEDIYAFLESL 245 (247)
T ss_dssp EEEEEETTCSSSCTTHHHHHHHHCCCSSEEEEEE--TTCCSSGGGS-----TTHHHHHHHHHHHHHHS
T ss_pred EEEEecCCCCCCCcchHHHHHHhcCCCceEEEEe--CCCceeeccC-----ccHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999755688888 9999999986 24799999999999875
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} | Back alignment and structure |
|---|
Probab=99.84 E-value=6.1e-20 Score=176.17 Aligned_cols=241 Identities=13% Similarity=0.150 Sum_probs=144.6
Q ss_pred cccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHh
Q 012210 158 LERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRA 237 (468)
Q Consensus 158 l~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~ 237 (468)
+-.+++.|-...++.+...|+ ++|+|+++|+.|++..-.. ...+|++++++ +|+.++++.+..
T Consensus 19 vllHG~~~~~~~w~~~~~~L~----~~~~vi~~Dl~G~G~S~~~------------~~~~~~~~~~a-~dl~~~l~~l~~ 81 (268)
T 3v48_A 19 VLISGLGGSGSYWLPQLAVLE----QEYQVVCYDQRGTGNNPDT------------LAEDYSIAQMA-AELHQALVAAGI 81 (268)
T ss_dssp EEECCTTCCGGGGHHHHHHHH----TTSEEEECCCTTBTTBCCC------------CCTTCCHHHHH-HHHHHHHHHTTC
T ss_pred EEeCCCCccHHHHHHHHHHHh----hcCeEEEECCCCCCCCCCC------------ccccCCHHHHH-HHHHHHHHHcCC
Confidence 333444444455566666665 6899999999999763110 01245788886 888888887643
Q ss_pred hcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHH
Q 012210 238 QSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALL 317 (468)
Q Consensus 238 ~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (468)
. +++++||||||.+++.+|.++ |++|+++|++++......... ..+.. . ...... .....+.
T Consensus 82 ----~--~~~lvGhS~GG~ia~~~A~~~-----p~~v~~lvl~~~~~~~~~~~~--~~~~~-~--~~~~~~--~~~~~~~ 143 (268)
T 3v48_A 82 ----E--HYAVVGHALGALVGMQLALDY-----PASVTVLISVNGWLRINAHTR--RCFQV-R--ERLLYS--GGAQAWV 143 (268)
T ss_dssp ----C--SEEEEEETHHHHHHHHHHHHC-----TTTEEEEEEESCCSBCCHHHH--HHHHH-H--HHHHHH--HHHHHHH
T ss_pred ----C--CeEEEEecHHHHHHHHHHHhC-----hhhceEEEEeccccccchhhh--HHHHH-H--HHHHhc--cchhhhh
Confidence 2 899999999999999999998 999999999987543221100 00000 0 000000 0000000
Q ss_pred HHhcCCCCCchhHHHHHHHhhhccccCCHHHHHH-HHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCcc
Q 012210 318 TAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKK-LVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIP 396 (468)
Q Consensus 318 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP 396 (468)
........ + ..|+.. ....+.. .............+......+. ..++...+.+|+||
T Consensus 144 ~~~~~~~~-~---~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~d~~~~l~~i~~P 202 (268)
T 3v48_A 144 EAQPLFLY-P---ADWMAA--------RAPRLEAEDALALAHFQGKNNLLRRLNALK---------RADFSHHADRIRCP 202 (268)
T ss_dssp HHHHHHHS-C---HHHHHT--------THHHHHHHHHHHHHTCCCHHHHHHHHHHHH---------HCBCTTTGGGCCSC
T ss_pred hhhhhhcC-c---hhhhhc--------ccccchhhHHHHHhhcCchhHHHHHHHHHh---------ccchhhhhhcCCCC
Confidence 00000000 0 000000 0000000 0000001111111211112221 12345678899999
Q ss_pred EEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 397 ILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 397 vLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
+|+|+|++|.++|++.++.+.+.+|++ +++++ +++||+.|.| +|++|.+.|.+||.+.
T Consensus 203 ~Lii~G~~D~~~p~~~~~~l~~~~p~~--~~~~~--~~~GH~~~~e------~p~~~~~~i~~fl~~~ 260 (268)
T 3v48_A 203 VQIICASDDLLVPTACSSELHAALPDS--QKMVM--PYGGHACNVT------DPETFNALLLNGLASL 260 (268)
T ss_dssp EEEEEETTCSSSCTHHHHHHHHHCSSE--EEEEE--SSCCTTHHHH------CHHHHHHHHHHHHHHH
T ss_pred eEEEEeCCCcccCHHHHHHHHHhCCcC--eEEEe--CCCCcchhhc------CHHHHHHHHHHHHHHh
Confidence 999999999999999999999999987 78888 9999999998 9999999999999864
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A | Back alignment and structure |
|---|
Probab=99.84 E-value=3.2e-20 Score=178.58 Aligned_cols=246 Identities=16% Similarity=0.208 Sum_probs=147.7
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|++.+-...++.++..|+ .+||+|+++|+.|++..-.. ..++++++++ +|+.++++++.
T Consensus 26 vvllHG~~~~~~~~~~~~~~L~---~~g~~vi~~D~~G~G~S~~~-------------~~~~~~~~~a-~dl~~~l~~l~ 88 (277)
T 1brt_A 26 VVLIHGFPLSGHSWERQSAALL---DAGYRVITYDRRGFGQSSQP-------------TTGYDYDTFA-ADLNTVLETLD 88 (277)
T ss_dssp EEEECCTTCCGGGGHHHHHHHH---HTTCEEEEECCTTSTTSCCC-------------SSCCSHHHHH-HHHHHHHHHHT
T ss_pred EEEECCCCCcHHHHHHHHHHHh---hCCCEEEEeCCCCCCCCCCC-------------CCCccHHHHH-HHHHHHHHHhC
Confidence 3443444444455666777777 88999999999999763110 1245788887 99999999874
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcc-cccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHh
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRES-RLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGA 315 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~-~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (468)
. ++++++||||||.+++.+|.++ |+ +|+++|++++..+...... ..+... .+......
T Consensus 89 ~------~~~~lvGhS~Gg~va~~~a~~~-----p~~~v~~lvl~~~~~~~~~~~~--------~~~~~~--~~~~~~~~ 147 (277)
T 1brt_A 89 L------QDAVLVGFSTGTGEVARYVSSY-----GTARIAKVAFLASLEPFLLKTD--------DNPDGA--APQEFFDG 147 (277)
T ss_dssp C------CSEEEEEEGGGHHHHHHHHHHH-----CSTTEEEEEEESCCCSCCBCBT--------TBTTCS--BCHHHHHH
T ss_pred C------CceEEEEECccHHHHHHHHHHc-----CcceEEEEEEecCcCccccccc--------cCcccc--ccHHHHHH
Confidence 3 2899999999999999999998 87 9999999987433211000 000000 00000000
Q ss_pred HHHHhcCCCCCchhHHHHHHHhhhc----cccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccC
Q 012210 316 LLTAAYPLSSSPPYVFSWLNNLISA----EDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIH 391 (468)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 391 (468)
+...... ........+...++.. .....++.+..+........ ... +...+ ... ..++...+.
T Consensus 148 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~-----~~~--~~~~~~~l~ 214 (277)
T 1brt_A 148 IVAAVKA--DRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGG-FFA---AAAAP-----TTW--YTDFRADIP 214 (277)
T ss_dssp HHHHHHH--CHHHHHHHHHHHHTTHHHHBTTTBCHHHHHHHHHHHHHSC-HHH---HHHGG-----GGT--TCCCTTTGG
T ss_pred HHHHHhc--CchhhHHHHHHHHhhccccccccCCHHHHHHHHHHHhccc-hHH---HHHHH-----HHH--hccchhhcc
Confidence 0000000 0000011111111110 01112222222211110000 000 11111 101 123445788
Q ss_pred ccCccEEEEecCCCCcCCHHHH-HHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 392 KCNIPILAIAGDQDLICPPEAV-EETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 392 ~I~vPvLiI~G~~D~ivp~~~~-~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
+|++|+|+|+|++|.++|++.+ +.+.+.+|+. +++++ ++++|+.|.+ .|+++.+.|.+||++
T Consensus 215 ~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~--~~~~i--~~~gH~~~~e------~p~~~~~~i~~fl~~ 277 (277)
T 1brt_A 215 RIDVPALILHGTGDRTLPIENTARVFHKALPSA--EYVEV--EGAPHGLLWT------HAEEVNTALLAFLAK 277 (277)
T ss_dssp GCCSCEEEEEETTCSSSCGGGTHHHHHHHCTTS--EEEEE--TTCCTTHHHH------THHHHHHHHHHHHHC
T ss_pred cCCCCeEEEecCCCccCChHHHHHHHHHHCCCC--cEEEe--CCCCcchhhh------CHHHHHHHHHHHHhC
Confidence 9999999999999999999987 9999999987 88888 9999999998 899999999999963
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.84 E-value=4.7e-20 Score=176.61 Aligned_cols=237 Identities=15% Similarity=0.161 Sum_probs=147.3
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|.+.+-...++.++..|+ .+|+|+++|+.|++..-.. ..++++++++ +|+.++++++.
T Consensus 29 vvllHG~~~~~~~~~~~~~~L~----~~~~vi~~D~~G~G~S~~~-------------~~~~~~~~~~-~dl~~~l~~l~ 90 (266)
T 2xua_A 29 IVLSNSLGTDLSMWAPQVAALS----KHFRVLRYDTRGHGHSEAP-------------KGPYTIEQLT-GDVLGLMDTLK 90 (266)
T ss_dssp EEEECCTTCCGGGGGGGHHHHH----TTSEEEEECCTTSTTSCCC-------------SSCCCHHHHH-HHHHHHHHHTT
T ss_pred EEEecCccCCHHHHHHHHHHHh----cCeEEEEecCCCCCCCCCC-------------CCCCCHHHHH-HHHHHHHHhcC
Confidence 3443444444455667777776 5699999999999763110 0235788887 99999998875
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhH
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAL 316 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
.. +++++||||||.+++.+|.++ |++|+++|+++++............... ..... ...+
T Consensus 91 ~~------~~~lvGhS~Gg~va~~~A~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~~----~~~~~-----~~~~ 150 (266)
T 2xua_A 91 IA------RANFCGLSMGGLTGVALAARH-----ADRIERVALCNTAARIGSPEVWVPRAVK----ARTEG-----MHAL 150 (266)
T ss_dssp CC------SEEEEEETHHHHHHHHHHHHC-----GGGEEEEEEESCCSSCSCHHHHHHHHHH----HHHHC-----HHHH
T ss_pred CC------ceEEEEECHHHHHHHHHHHhC-----hhhhheeEEecCCCCCCchHHHHHHHHH----HHhcC-----hHHH
Confidence 32 899999999999999999998 8999999999886543221100000000 00000 0000
Q ss_pred HHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCcc
Q 012210 317 LTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIP 396 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP 396 (468)
.... ...++..... ..+++....+. ..........+......+.. .+....+.+|++|
T Consensus 151 ~~~~---------~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---------~~~~~~l~~i~~P 208 (266)
T 2xua_A 151 ADAV---------LPRWFTADYM---EREPVVLAMIR-DVFVHTDKEGYASNCEAIDA---------ADLRPEAPGIKVP 208 (266)
T ss_dssp HHHH---------HHHHSCHHHH---HHCHHHHHHHH-HHHHTSCHHHHHHHHHHHHH---------CCCGGGGGGCCSC
T ss_pred HHHH---------HHHHcCcccc---cCCHHHHHHHH-HHHhhCCHHHHHHHHHHHhc---------cCchhhhccCCCC
Confidence 0000 0011000000 00122211111 11111222222222222211 1234568889999
Q ss_pred EEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 397 ILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 397 vLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
+|+|+|++|.++|++.++++.+.++++ +++++ + ++|+.+.+ .|+++.+.|.+||++.
T Consensus 209 ~lvi~G~~D~~~~~~~~~~~~~~~~~~--~~~~~--~-~gH~~~~e------~p~~~~~~i~~fl~~~ 265 (266)
T 2xua_A 209 ALVISGTHDLAATPAQGRELAQAIAGA--RYVEL--D-ASHISNIE------RADAFTKTVVDFLTEQ 265 (266)
T ss_dssp EEEEEETTCSSSCHHHHHHHHHHSTTC--EEEEE--S-CCSSHHHH------THHHHHHHHHHHHTC-
T ss_pred EEEEEcCCCCcCCHHHHHHHHHhCCCC--EEEEe--c-CCCCchhc------CHHHHHHHHHHHHHhc
Confidence 999999999999999999999999987 88888 8 99999998 8999999999999764
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A | Back alignment and structure |
|---|
Probab=99.84 E-value=8.7e-20 Score=176.54 Aligned_cols=221 Identities=16% Similarity=0.234 Sum_probs=135.0
Q ss_pred hcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHH
Q 012210 182 EEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAM 261 (468)
Q Consensus 182 ~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~ 261 (468)
.+||+|+++|+.|++..-... ..+|++++++ +|+.++++.+.. + +++++||||||.+++.+
T Consensus 52 ~~~~~vi~~Dl~G~G~S~~~~------------~~~~~~~~~a-~dl~~~l~~l~~----~--~~~lvGhS~GG~ia~~~ 112 (282)
T 1iup_A 52 SKFYRVIAPDMVGFGFTDRPE------------NYNYSKDSWV-DHIIGIMDALEI----E--KAHIVGNAFGGGLAIAT 112 (282)
T ss_dssp TTTSEEEEECCTTSTTSCCCT------------TCCCCHHHHH-HHHHHHHHHTTC----C--SEEEEEETHHHHHHHHH
T ss_pred ccCCEEEEECCCCCCCCCCCC------------CCCCCHHHHH-HHHHHHHHHhCC----C--ceEEEEECHhHHHHHHH
Confidence 579999999999997631100 0145788886 899988887643 2 99999999999999999
Q ss_pred HHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCchhHHHHHHHhhhcc
Q 012210 262 LSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAE 341 (468)
Q Consensus 262 a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 341 (468)
|.++ |++|+++|++++.............+... .+ ....+..++..+....
T Consensus 113 A~~~-----P~~v~~lvl~~~~~~~~~~~~~~~~~~~~--------~~----------------~~~~~~~~~~~~~~~~ 163 (282)
T 1iup_A 113 ALRY-----SERVDRMVLMGAAGTRFDVTEGLNAVWGY--------TP----------------SIENMRNLLDIFAYDR 163 (282)
T ss_dssp HHHS-----GGGEEEEEEESCCCSCCCCCHHHHHHHTC--------CS----------------CHHHHHHHHHHHCSSG
T ss_pred HHHC-----hHHHHHHHeeCCccCCCCCCHHHHHHhcC--------CC----------------cHHHHHHHHHHhhcCc
Confidence 9998 99999999998865322111111111000 00 0000111111111111
Q ss_pred ccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcC--cccccCCccccccccCccCccEEEEecCCCCcCCHHHHHHHHHh
Q 012210 342 DMMHPELLKKLVLNNFCTIPAKLILQLTTAFREG--GLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKL 419 (468)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ 419 (468)
.....+.....+..... +. ....+...+... .+.. ........+.+|++|+|+|+|++|.++|++.++++.+.
T Consensus 164 ~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~~~~~~ 238 (282)
T 1iup_A 164 SLVTDELARLRYEASIQ--PG-FQESFSSMFPEPRQRWID--ALASSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGEL 238 (282)
T ss_dssp GGCCHHHHHHHHHHHTS--TT-HHHHHHHHSCSSTHHHHH--HHCCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHH
T ss_pred ccCCHHHHHHHHhhccC--hH-HHHHHHHHHhcccccccc--ccccchhhhhhcCCCEEEEecCCCCCCCHHHHHHHHHh
Confidence 11122222211111100 00 001111110000 0000 00001146788999999999999999999999999999
Q ss_pred CCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 420 LPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 420 ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
+|++ +++++ +++||+.|.| .|+++.+.|.+||++..
T Consensus 239 ~~~~--~~~~i--~~~gH~~~~e------~p~~~~~~i~~fl~~~~ 274 (282)
T 1iup_A 239 IDRA--QLHVF--GRCGHWTQIE------QTDRFNRLVVEFFNEAN 274 (282)
T ss_dssp CTTE--EEEEE--SSCCSCHHHH------SHHHHHHHHHHHHHTC-
T ss_pred CCCC--eEEEE--CCCCCCcccc------CHHHHHHHHHHHHhcCC
Confidence 9986 88888 9999999998 89999999999998754
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.83 E-value=4.5e-20 Score=177.86 Aligned_cols=246 Identities=18% Similarity=0.232 Sum_probs=145.0
Q ss_pred cccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHh
Q 012210 158 LERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRA 237 (468)
Q Consensus 158 l~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~ 237 (468)
+-.|++.+-...++.+...|+ .+||+|+++|+.|++..-.. ...+++++++ +|+.++++++..
T Consensus 31 vllHG~~~~~~~w~~~~~~l~---~~g~~vi~~D~~G~G~S~~~-------------~~~~~~~~~a-~dl~~ll~~l~~ 93 (281)
T 3fob_A 31 VLIHGWPLSGRSWEYQVPALV---EAGYRVITYDRRGFGKSSQP-------------WEGYEYDTFT-SDLHQLLEQLEL 93 (281)
T ss_dssp EEECCTTCCGGGGTTTHHHHH---HTTEEEEEECCTTSTTSCCC-------------SSCCSHHHHH-HHHHHHHHHTTC
T ss_pred EEECCCCCcHHHHHHHHHHHH---hCCCEEEEeCCCCCCCCCCC-------------ccccCHHHHH-HHHHHHHHHcCC
Confidence 333444444555666777777 89999999999999763110 1245677886 899888887743
Q ss_pred hcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCC-cchHhH
Q 012210 238 QSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPV-VPLGAL 316 (468)
Q Consensus 238 ~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 316 (468)
. +++++||||||++++.+++.+. |++|+++|++++..+....... .+. .... .....+
T Consensus 94 ~------~~~lvGhS~GG~i~~~~~a~~~----p~~v~~lvl~~~~~~~~~~~~~--------~~~---~~~~~~~~~~~ 152 (281)
T 3fob_A 94 Q------NVTLVGFSMGGGEVARYISTYG----TDRIEKVVFAGAVPPYLYKSED--------HPE---GALDDATIETF 152 (281)
T ss_dssp C------SEEEEEETTHHHHHHHHHHHHC----STTEEEEEEESCCCSCCBCCSS--------STT---CSBCHHHHHHH
T ss_pred C------cEEEEEECccHHHHHHHHHHcc----ccceeEEEEecCCCcchhcccc--------ccc---cccchhHHHHH
Confidence 2 8999999999998888777641 6899999999865332110000 000 0000 000000
Q ss_pred HHHhcCCCCCchhHHHHHHHhhhcc---ccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCcc
Q 012210 317 LTAAYPLSSSPPYVFSWLNNLISAE---DMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKC 393 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I 393 (468)
...... ....++..+...++... .................. ...........+. ..++...+.+|
T Consensus 153 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---------~~d~~~~l~~i 220 (281)
T 3fob_A 153 KSGVIN--DRLAFLDEFTKGFFAAGDRTDLVSESFRLYNWDIAAGA-SPKGTLDCITAFS---------KTDFRKDLEKF 220 (281)
T ss_dssp HHHHHH--HHHHHHHHHHHHHTCBTTBCCSSCHHHHHHHHHHHHTS-CHHHHHHHHHHHH---------HCCCHHHHTTC
T ss_pred HHHhhh--hHHHHHHHHHHHhcccccccccchHHHHHHhhhhhccc-ChHHHHHHHHHcc---------ccchhhhhhhc
Confidence 000000 00001111111111111 111122111111111111 1122222222221 12334678899
Q ss_pred CccEEEEecCCCCcCCHHHH-HHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 394 NIPILAIAGDQDLICPPEAV-EETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 394 ~vPvLiI~G~~D~ivp~~~~-~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
+||+|+|+|++|.++|++.+ +.+.+.+|++ +++++ +++||+.|.+ +|+++.+.|.+||++
T Consensus 221 ~~P~Lii~G~~D~~~p~~~~~~~~~~~~p~~--~~~~i--~~~gH~~~~e------~p~~~~~~i~~Fl~~ 281 (281)
T 3fob_A 221 NIPTLIIHGDSDATVPFEYSGKLTHEAIPNS--KVALI--KGGPHGLNAT------HAKEFNEALLLFLKD 281 (281)
T ss_dssp CSCEEEEEETTCSSSCGGGTHHHHHHHSTTC--EEEEE--TTCCTTHHHH------THHHHHHHHHHHHCC
T ss_pred CCCEEEEecCCCCCcCHHHHHHHHHHhCCCc--eEEEe--CCCCCchhhh------hHHHHHHHHHHHhhC
Confidence 99999999999999999965 7778899987 88888 9999999998 999999999999963
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A | Back alignment and structure |
|---|
Probab=99.83 E-value=6.5e-20 Score=173.76 Aligned_cols=225 Identities=15% Similarity=0.147 Sum_probs=134.7
Q ss_pred cccccccccc-ccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCC---hhhHHhhhHHHHH
Q 012210 157 LLERRQSSAI-AIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWD---FDHYLEEDVPAAM 232 (468)
Q Consensus 157 ll~~~~~~G~-~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~---~~~~~~~D~~a~i 232 (468)
++-.|++.|- ...+..+++.|+ .+||+|+++|+.|++..... ..+++ +.+.+ +|+.+++
T Consensus 26 vvllHG~~~~~~~~~~~~~~~l~---~~g~~vi~~D~~G~G~S~~~-------------~~~~~~~~~~~~~-~~~~~~l 88 (254)
T 2ocg_A 26 VLLLPGMLGSGETDFGPQLKNLN---KKLFTVVAWDPRGYGHSRPP-------------DRDFPADFFERDA-KDAVDLM 88 (254)
T ss_dssp EEEECCTTCCHHHHCHHHHHHSC---TTTEEEEEECCTTSTTCCSS-------------CCCCCTTHHHHHH-HHHHHHH
T ss_pred EEEECCCCCCCccchHHHHHHHh---hCCCeEEEECCCCCCCCCCC-------------CCCCChHHHHHHH-HHHHHHH
Confidence 3443444443 233556667776 88999999999999763110 01223 33333 5555554
Q ss_pred HHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcc
Q 012210 233 EYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVP 312 (468)
Q Consensus 233 ~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (468)
+.+ +. .+++++||||||.+++.+|.++ |++|+++|+++++....... ...........
T Consensus 89 ~~l----~~--~~~~l~GhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~~~~~~--~~~~~~~~~~~--------- 146 (254)
T 2ocg_A 89 KAL----KF--KKVSLLGWSDGGITALIAAAKY-----PSYIHKMVIWGANAYVTDED--SMIYEGIRDVS--------- 146 (254)
T ss_dssp HHT----TC--SSEEEEEETHHHHHHHHHHHHC-----TTTEEEEEEESCCSBCCHHH--HHHHHTTSCGG---------
T ss_pred HHh----CC--CCEEEEEECHhHHHHHHHHHHC-----hHHhhheeEeccccccChhh--HHHHHHHHHHH---------
Confidence 443 33 3899999999999999999998 88999999998754322110 00000000000
Q ss_pred hHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCc
Q 012210 313 LGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHK 392 (468)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 392 (468)
.........+.... ....... ....+...+.. +............+.+
T Consensus 147 ------------~~~~~~~~~~~~~~------~~~~~~~------------~~~~~~~~~~~--~~~~~~~~~~~~~l~~ 194 (254)
T 2ocg_A 147 ------------KWSERTRKPLEALY------GYDYFAR------------TCEKWVDGIRQ--FKHLPDGNICRHLLPR 194 (254)
T ss_dssp ------------GSCHHHHHHHHHHH------CHHHHHH------------HHHHHHHHHHG--GGGSGGGBSSGGGGGG
T ss_pred ------------HHHHHhHHHHHHHh------cchhhHH------------HHHHHHHHHHH--HHhccCCchhhhhhhc
Confidence 00000000000000 0000000 01111111110 0000011123456789
Q ss_pred cCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 012210 393 CNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 462 (468)
Q Consensus 393 I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~ 462 (468)
|++|+|+|+|++|.++|++.++.+.+.+|+. +++++ ++++|+.|.+ .|+++.+.|.+||+
T Consensus 195 i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~--~~~~~--~~~gH~~~~e------~p~~~~~~i~~fl~ 254 (254)
T 2ocg_A 195 VQCPALIVHGEKDPLVPRFHADFIHKHVKGS--RLHLM--PEGKHNLHLR------FADEFNKLAEDFLQ 254 (254)
T ss_dssp CCSCEEEEEETTCSSSCHHHHHHHHHHSTTC--EEEEE--TTCCTTHHHH------THHHHHHHHHHHHC
T ss_pred ccCCEEEEecCCCccCCHHHHHHHHHhCCCC--EEEEc--CCCCCchhhh------CHHHHHHHHHHHhC
Confidence 9999999999999999999999999999987 88888 9999999997 89999999999984
|
| >1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=2.9e-19 Score=177.92 Aligned_cols=274 Identities=17% Similarity=0.189 Sum_probs=159.7
Q ss_pred hhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEE
Q 012210 171 RDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIG 250 (468)
Q Consensus 171 ~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvG 250 (468)
..+++.|+ .+||+|+++|+.|++....... +. ......+++++.+++..|+.++++++....+.. +++++|
T Consensus 81 ~~~a~~l~---~~G~~vi~~D~~G~G~S~~~~~--~~--~~~~~~~~~~~~~~~~~D~~~~i~~~~~~~~~~--~~~lvG 151 (377)
T 1k8q_A 81 NSLAFILA---DAGYDVWLGNSRGNTWARRNLY--YS--PDSVEFWAFSFDEMAKYDLPATIDFILKKTGQD--KLHYVG 151 (377)
T ss_dssp TCHHHHHH---HTTCEEEECCCTTSTTSCEESS--SC--TTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCS--CEEEEE
T ss_pred ccHHHHHH---HCCCCEEEecCCCCCCCCCCCC--CC--CCcccccCccHHHHHhhhHHHHHHHHHHhcCcC--ceEEEE
Confidence 34566888 8999999999999876321100 00 000001256788887339999999998887765 999999
Q ss_pred EehhHHHHHHHHHhcCCCCCcc---cccceeEEccccccCCchhhHHhhcccCch--hhhcC----CCCcchHhHHH-Hh
Q 012210 251 HSMGGILLYAMLSRCGFEGRES---RLAAIVTLASSLDYTSSKSTLKLLLPLADP--AQALN----VPVVPLGALLT-AA 320 (468)
Q Consensus 251 hS~GG~ia~~~a~~~~~~~~p~---~V~~lVllap~~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~-~~ 320 (468)
|||||.+++.+|.++ |+ +|+++|+++|.............+...... ....+ .+.......+. .+
T Consensus 152 ~S~Gg~ia~~~a~~~-----p~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (377)
T 1k8q_A 152 HSQGTTIGFIAFSTN-----PKLAKRIKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEV 226 (377)
T ss_dssp ETHHHHHHHHHHHHC-----HHHHTTEEEEEEESCCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHT
T ss_pred echhhHHHHHHHhcC-----chhhhhhhEEEEeCCchhcccchhHHHHHHhhccHHHHhhcCccccCcHHHHHHHHHHHh
Confidence 999999999999987 77 899999999876543322111111100000 00000 00000000000 00
Q ss_pred cCCCCCchhHHHHHHHhhhc-cccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCC------c------cccc
Q 012210 321 YPLSSSPPYVFSWLNNLISA-EDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGG------K------FFYK 387 (468)
Q Consensus 321 ~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~------~~~~ 387 (468)
............++...... ....+.+.+..+............+..+.+.+..+.+..+.. . ....
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (377)
T 1k8q_A 227 CSRETVDLLCSNALFIICGFDTMNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPY 306 (377)
T ss_dssp TTBTTTHHHHHHHHHHHHCCCGGGSCGGGHHHHHTTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCB
T ss_pred hCCccHHHHHHHHHHHhcCCCcccCCHHHHHHHhccCCCCccHHHHHHHHHHHhcCCeeeccCCcchhhHHHcCCCCCcc
Confidence 00000001111111111111 111233334443333333344455666666555443332210 0 0012
Q ss_pred cccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 388 DHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 388 ~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
..+.+|++|+|+|+|++|.++|++.++.+.+.+++.. +++++ ++++|+.++ ++.+.++++++.|.+||+++
T Consensus 307 ~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~-~~~~~--~~~gH~~~~---~~~~~~~~~~~~i~~fl~~~ 377 (377)
T 1k8q_A 307 YNLTDMHVPIAVWNGGNDLLADPHDVDLLLSKLPNLI-YHRKI--PPYNHLDFI---WAMDAPQAVYNEIVSMMGTD 377 (377)
T ss_dssp CCGGGCCSCEEEEEETTCSSSCHHHHHHHHTTCTTEE-EEEEE--TTCCTTHHH---HCTTHHHHTHHHHHHHHHTC
T ss_pred cCHhhCCCCEEEEEeCCCcccCHHHHHHHHHhCcCcc-cEEec--CCCCceEEE---ecCCcHHHHHHHHHHHhccC
Confidence 3488999999999999999999999999999999862 37777 889998886 12238999999999999864
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.83 E-value=7.1e-20 Score=175.19 Aligned_cols=248 Identities=15% Similarity=0.174 Sum_probs=147.3
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|++.+-...++.++..|+ . +|+|+++|+.|++..-... ...|++++++ +|+.++++++.
T Consensus 19 vvllHG~~~~~~~~~~~~~~L~---~-~~~vi~~Dl~G~G~S~~~~------------~~~~~~~~~~-~dl~~~l~~l~ 81 (269)
T 2xmz_A 19 LVFLHGFLSDSRTYHNHIEKFT---D-NYHVITIDLPGHGEDQSSM------------DETWNFDYIT-TLLDRILDKYK 81 (269)
T ss_dssp EEEECCTTCCGGGGTTTHHHHH---T-TSEEEEECCTTSTTCCCCT------------TSCCCHHHHH-HHHHHHHGGGT
T ss_pred EEEEcCCCCcHHHHHHHHHHHh---h-cCeEEEecCCCCCCCCCCC------------CCccCHHHHH-HHHHHHHHHcC
Confidence 4444555555555666777776 4 5999999999997631100 0135778886 88888888764
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhH
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAL 316 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
. ++++++||||||.+++.+|.++ |++|+++|+++++............... ....
T Consensus 82 ~------~~~~lvGhS~Gg~va~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~~--------------~~~~ 136 (269)
T 2xmz_A 82 D------KSITLFGYSMGGRVALYYAING-----HIPISNLILESTSPGIKEEANQLERRLV--------------DDAR 136 (269)
T ss_dssp T------SEEEEEEETHHHHHHHHHHHHC-----SSCCSEEEEESCCSCCSSHHHHHHHHHH--------------HHHH
T ss_pred C------CcEEEEEECchHHHHHHHHHhC-----chheeeeEEEcCCcccCCchhHHHHhhh--------------hhHH
Confidence 3 2999999999999999999998 8899999999975543221111000000 0000
Q ss_pred HHHhcCCCCCchhHHHHHHH-hhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCc
Q 012210 317 LTAAYPLSSSPPYVFSWLNN-LISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNI 395 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~v 395 (468)
...+.. .....++..|... .+......+.+....+........+.. +......+... ...++...+.+|+|
T Consensus 137 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~------~~~~~~~~l~~i~~ 208 (269)
T 2xmz_A 137 AKVLDI-AGIELFVNDWEKLPLFQSQLELPVEIQHQIRQQRLSQSPHK-MAKALRDYGTG------QMPNLWPRLKEIKV 208 (269)
T ss_dssp HHHHHH-HCHHHHHHHHTTSGGGGGGGGSCHHHHHHHHHHHHTSCHHH-HHHHHHHHSTT------TSCCCGGGGGGCCS
T ss_pred HHhhcc-ccHHHHHHHHHhCccccccccCCHHHHHHHHHHHhccCcHH-HHHHHHHHHhc------cCccHHHHHHhcCC
Confidence 000000 0000000111100 011000012222222221111122222 11121111110 11233457889999
Q ss_pred cEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 396 PILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 396 PvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
|+|+|+|++|.++|++..+ +.+.+|+. +++++ +++||+.+.+ .|+++.+.|.+||++..
T Consensus 209 P~lii~G~~D~~~~~~~~~-~~~~~~~~--~~~~i--~~~gH~~~~e------~p~~~~~~i~~fl~~~~ 267 (269)
T 2xmz_A 209 PTLILAGEYDEKFVQIAKK-MANLIPNS--KCKLI--SATGHTIHVE------DSDEFDTMILGFLKEEQ 267 (269)
T ss_dssp CEEEEEETTCHHHHHHHHH-HHHHSTTE--EEEEE--TTCCSCHHHH------SHHHHHHHHHHHHHHHC
T ss_pred CEEEEEeCCCcccCHHHHH-HHhhCCCc--EEEEe--CCCCCChhhc------CHHHHHHHHHHHHHHhc
Confidence 9999999999999888755 88999876 88888 9999999998 89999999999998653
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A | Back alignment and structure |
|---|
Probab=99.83 E-value=1.4e-19 Score=175.20 Aligned_cols=233 Identities=11% Similarity=0.098 Sum_probs=139.8
Q ss_pred hhhHH-HHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEE
Q 012210 170 IRDLS-QNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLA 248 (468)
Q Consensus 170 i~~~a-~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~l 248 (468)
+..+. ..|+ ++|+|+++|+.|++..-.. ....+++++++ +|+.++++.+.. + ++++
T Consensus 52 w~~~~~~~L~----~~~~vi~~D~~G~G~S~~~------------~~~~~~~~~~a-~dl~~~l~~l~~----~--~~~l 108 (286)
T 2puj_A 52 YYRNVGPFVD----AGYRVILKDSPGFNKSDAV------------VMDEQRGLVNA-RAVKGLMDALDI----D--RAHL 108 (286)
T ss_dssp HTTTHHHHHH----TTCEEEEECCTTSTTSCCC------------CCSSCHHHHHH-HHHHHHHHHTTC----C--CEEE
T ss_pred HHHHHHHHHh----ccCEEEEECCCCCCCCCCC------------CCcCcCHHHHH-HHHHHHHHHhCC----C--ceEE
Confidence 34455 5565 4599999999999763110 00135677776 888888877643 3 9999
Q ss_pred EEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCch
Q 012210 249 IGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPP 328 (468)
Q Consensus 249 vGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (468)
+||||||.+++.+|.++ |++|+++|++++......... +.. ......+...... ....
T Consensus 109 vGhS~GG~va~~~A~~~-----p~~v~~lvl~~~~~~~~~~~~------~~~---------~~~~~~~~~~~~~--~~~~ 166 (286)
T 2puj_A 109 VGNAMGGATALNFALEY-----PDRIGKLILMGPGGLGPSMFA------PMP---------MEGIKLLFKLYAE--PSYE 166 (286)
T ss_dssp EEETHHHHHHHHHHHHC-----GGGEEEEEEESCSCCCCCSSS------CSS---------CHHHHHHHHHHHS--CCHH
T ss_pred EEECHHHHHHHHHHHhC-----hHhhheEEEECccccCCCccc------ccc---------hhhHHHHHHHhhC--CcHH
Confidence 99999999999999998 999999999988643211000 000 0000000000000 0001
Q ss_pred hHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecCCCCcC
Q 012210 329 YVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLIC 408 (468)
Q Consensus 329 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~D~iv 408 (468)
.+..++..+.........+.....+... ... ......+...+..... ...+....+.+|++|+|+|+|++|.++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~----~~~~~~~~l~~i~~P~Lii~G~~D~~~ 240 (286)
T 2puj_A 167 TLKQMLQVFLYDQSLITEELLQGRWEAI-QRQ-PEHLKNFLISAQKAPL----STWDVTARLGEIKAKTFITWGRDDRFV 240 (286)
T ss_dssp HHHHHHHHHCSCGGGCCHHHHHHHHHHH-HHC-HHHHHHHHHHHHHSCG----GGGCCGGGGGGCCSCEEEEEETTCSSS
T ss_pred HHHHHHHHHhcCCccCCHHHHHHHHHHh-hcC-HHHHHHHHHHHhhhhc----cccchhhHHhhcCCCEEEEEECCCCcc
Confidence 1112222111111111222222211100 001 1112222221111000 112234678899999999999999999
Q ss_pred CHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 409 PPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 409 p~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
|++.++.+.+.+|++ +++++ +++||+.|.| .|+++.+.|.+||++
T Consensus 241 p~~~~~~~~~~~~~~--~~~~i--~~~gH~~~~e------~p~~~~~~i~~fl~~ 285 (286)
T 2puj_A 241 PLDHGLKLLWNIDDA--RLHVF--SKCGAWAQWE------HADEFNRLVIDFLRH 285 (286)
T ss_dssp CTHHHHHHHHHSSSE--EEEEE--SSCCSCHHHH------THHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCCC--eEEEe--CCCCCCcccc------CHHHHHHHHHHHHhc
Confidence 999999999999976 88888 9999999998 899999999999974
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.3e-19 Score=179.62 Aligned_cols=249 Identities=17% Similarity=0.227 Sum_probs=144.2
Q ss_pred cccccccccccchhhHHHHHHhhhh-cCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 158 LERRQSSAIAIQIRDLSQNLVNMIE-EGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 158 l~~~~~~G~~~~i~~~a~~la~~l~-~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
+-.+++.|....+......|+ . .||+|+++|+.|++..-.... .....|+++.++ +|+.++++.+.
T Consensus 58 vllHG~~~~~~~w~~~~~~l~---~~~~~~Via~D~rG~G~S~~~~~---------~~~~~~~~~~~a-~dl~~ll~~lg 124 (330)
T 3nwo_A 58 IVLHGGPGMAHNYVANIAALA---DETGRTVIHYDQVGCGNSTHLPD---------APADFWTPQLFV-DEFHAVCTALG 124 (330)
T ss_dssp EEECCTTTCCSGGGGGGGGHH---HHHTCCEEEECCTTSTTSCCCTT---------SCGGGCCHHHHH-HHHHHHHHHHT
T ss_pred EEECCCCCCchhHHHHHHHhc---cccCcEEEEECCCCCCCCCCCCC---------CccccccHHHHH-HHHHHHHHHcC
Confidence 333445555545555544454 5 699999999999976311000 001124677776 99999998885
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhH
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAL 316 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
.. +++++||||||++++.+|.++ |++|.++|+++++............+... .+......+
T Consensus 125 ~~------~~~lvGhSmGG~va~~~A~~~-----P~~v~~lvl~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~ 185 (330)
T 3nwo_A 125 IE------RYHVLGQSWGGMLGAEIAVRQ-----PSGLVSLAICNSPASMRLWSEAAGDLRAQ--------LPAETRAAL 185 (330)
T ss_dssp CC------SEEEEEETHHHHHHHHHHHTC-----CTTEEEEEEESCCSBHHHHHHHHHHHHHH--------SCHHHHHHH
T ss_pred CC------ceEEEecCHHHHHHHHHHHhC-----CccceEEEEecCCcchHHHHHHHHHHHHh--------cCHHHHHHH
Confidence 43 899999999999999999998 89999999998765421100000000000 000000000
Q ss_pred HHH-hcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhcc---CCCcHHHHHHHHH----------HHhcCcccc--c
Q 012210 317 LTA-AYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNF---CTIPAKLILQLTT----------AFREGGLRD--R 380 (468)
Q Consensus 317 ~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~----------~~~~~~~~~--~ 380 (468)
... .......+.+. .....++.... ...+......+.. ......+.. .
T Consensus 186 ~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (330)
T 3nwo_A 186 DRHEAAGTITHPDYL----------------QAAAEFYRRHVCRVVPTPQDFADSVAQMEAEPTVYHTMNGPNEFHVVGT 249 (330)
T ss_dssp HHHHHHTCTTSHHHH----------------HHHHHHHHHHTCCSSSCCHHHHHHHHHHHHSCHHHHHHTCSCSSSCCSG
T ss_pred HHHHhccCCCCHHHH----------------HHHHHHHHHhhccccCCCHHHHHHHHhhccchhhhhcccCchhhhhhcc
Confidence 000 00000000000 00001111110 1112111111111 000001100 0
Q ss_pred CCccccccccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHH
Q 012210 381 GGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQF 460 (468)
Q Consensus 381 ~~~~~~~~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~F 460 (468)
....+....+.+|++|+|+|+|++|.++| ...+++.+.+|++ +++++ |++||+.|.| +|++|.+.|.+|
T Consensus 250 ~~~~~~~~~l~~i~~P~Lvi~G~~D~~~p-~~~~~~~~~ip~~--~~~~i--~~~gH~~~~e------~p~~~~~~i~~F 318 (330)
T 3nwo_A 250 LGDWSVIDRLPDVTAPVLVIAGEHDEATP-KTWQPFVDHIPDV--RSHVF--PGTSHCTHLE------KPEEFRAVVAQF 318 (330)
T ss_dssp GGGCBCGGGGGGCCSCEEEEEETTCSSCH-HHHHHHHHHCSSE--EEEEE--TTCCTTHHHH------SHHHHHHHHHHH
T ss_pred ccCCchhhhcccCCCCeEEEeeCCCccCh-HHHHHHHHhCCCC--cEEEe--CCCCCchhhc------CHHHHHHHHHHH
Confidence 11223456788999999999999999875 5678899999976 88888 9999999998 999999999999
Q ss_pred Hhhcc
Q 012210 461 LGRYD 465 (468)
Q Consensus 461 L~~~~ 465 (468)
|++++
T Consensus 319 L~~~~ 323 (330)
T 3nwo_A 319 LHQHD 323 (330)
T ss_dssp HHHHH
T ss_pred HHhcc
Confidence 98864
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A | Back alignment and structure |
|---|
Probab=99.83 E-value=1.1e-19 Score=173.50 Aligned_cols=247 Identities=19% Similarity=0.243 Sum_probs=142.6
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|++.+-...++.++..|+ .+||+|+++|+.|++..-.. ...+++++++ +|+.++++++.
T Consensus 22 vvllHG~~~~~~~w~~~~~~l~---~~g~~vi~~D~~G~G~S~~~-------------~~~~~~~~~a-~d~~~~l~~l~ 84 (271)
T 3ia2_A 22 VLFSHGWLLDADMWEYQMEYLS---SRGYRTIAFDRRGFGRSDQP-------------WTGNDYDTFA-DDIAQLIEHLD 84 (271)
T ss_dssp EEEECCTTCCGGGGHHHHHHHH---TTTCEEEEECCTTSTTSCCC-------------SSCCSHHHHH-HHHHHHHHHHT
T ss_pred EEEECCCCCcHHHHHHHHHHHH---hCCceEEEecCCCCccCCCC-------------CCCCCHHHHH-HHHHHHHHHhC
Confidence 3443555555556666777777 88999999999999763110 1134677886 99999998875
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhH
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAL 316 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
.. +++++||||||.+++.+++.+. |++|+++|++++..+......... ...+......+
T Consensus 85 ~~------~~~lvGhS~GG~~~~~~~a~~~----p~~v~~lvl~~~~~~~~~~~~~~~-----------~~~~~~~~~~~ 143 (271)
T 3ia2_A 85 LK------EVTLVGFSMGGGDVARYIARHG----SARVAGLVLLGAVTPLFGQKPDYP-----------QGVPLDVFARF 143 (271)
T ss_dssp CC------SEEEEEETTHHHHHHHHHHHHC----STTEEEEEEESCCCSBCBCBTTBT-----------TSBCHHHHHHH
T ss_pred CC------CceEEEEcccHHHHHHHHHHhC----CcccceEEEEccCCccccCCCCCc-----------ccccHHHHHHH
Confidence 42 8999999999998777776641 678999999987543221100000 00000000000
Q ss_pred HHHhcCCCCCchhHHHHHHHhhhcc--ccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccC
Q 012210 317 LTAAYPLSSSPPYVFSWLNNLISAE--DMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCN 394 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~ 394 (468)
...... ....+...+...+.... .................... .........+. ..++...+.+|+
T Consensus 144 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---------~~~~~~~l~~i~ 211 (271)
T 3ia2_A 144 KTELLK--DRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASL-KATVDCVTAFA---------ETDFRPDMAKID 211 (271)
T ss_dssp HHHHHH--HHHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSCH-HHHHHHHHHHH---------HCBCHHHHTTCC
T ss_pred HHHHHh--hHHHHHHHhhHhhhccccccccCHHHHHHHHhhhhhccH-HHHHHHHHHhh---------ccCCcccccCCC
Confidence 000000 00000001111111100 01112111111111101111 11111111111 112345688999
Q ss_pred ccEEEEecCCCCcCCHHH-HHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 395 IPILAIAGDQDLICPPEA-VEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 395 vPvLiI~G~~D~ivp~~~-~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
||+|+|+|++|.++|++. .+.+.+.++++ +++++ ++++|+.+.+ .|+++.+.|.+||++
T Consensus 212 ~P~Lvi~G~~D~~~p~~~~~~~~~~~~~~~--~~~~~--~~~gH~~~~e------~p~~~~~~i~~Fl~~ 271 (271)
T 3ia2_A 212 VPTLVIHGDGDQIVPFETTGKVAAELIKGA--ELKVY--KDAPHGFAVT------HAQQLNEDLLAFLKR 271 (271)
T ss_dssp SCEEEEEETTCSSSCGGGTHHHHHHHSTTC--EEEEE--TTCCTTHHHH------THHHHHHHHHHHHTC
T ss_pred CCEEEEEeCCCCcCChHHHHHHHHHhCCCc--eEEEE--cCCCCccccc------CHHHHHHHHHHHhhC
Confidence 999999999999999987 56667788877 88888 9999999998 999999999999964
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A | Back alignment and structure |
|---|
Probab=99.83 E-value=3.4e-19 Score=172.10 Aligned_cols=223 Identities=16% Similarity=0.216 Sum_probs=133.7
Q ss_pred hhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHH-HhhcCCCCCcEEEEEEehhHHHHH
Q 012210 181 IEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYI-RAQSKPKDGKLLAIGHSMGGILLY 259 (468)
Q Consensus 181 l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l-~~~~~~~~~~v~lvGhS~GG~ia~ 259 (468)
+.+||+|+++|+.|++...... ...+++++++ +|+.++++++ .. + +++++||||||.+++
T Consensus 52 ~~~g~~vi~~D~~G~G~S~~~~------------~~~~~~~~~~-~dl~~~~~~l~~~----~--~~~lvGhS~Gg~va~ 112 (293)
T 1mtz_A 52 TKEGITVLFYDQFGCGRSEEPD------------QSKFTIDYGV-EEAEALRSKLFGN----E--KVFLMGSSYGGALAL 112 (293)
T ss_dssp GGGTEEEEEECCTTSTTSCCCC------------GGGCSHHHHH-HHHHHHHHHHHTT----C--CEEEEEETHHHHHHH
T ss_pred HhcCcEEEEecCCCCccCCCCC------------CCcccHHHHH-HHHHHHHHHhcCC----C--cEEEEEecHHHHHHH
Confidence 3789999999999997632110 1135777886 8999999888 43 2 899999999999999
Q ss_pred HHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCchhHHHHHHHhhh
Q 012210 260 AMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLIS 339 (468)
Q Consensus 260 ~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 339 (468)
.+|.++ |++|+++|+++++............+... .+. ... ..+.....
T Consensus 113 ~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~~~--------~~~----~~~--------------~~~~~~~~ 161 (293)
T 1mtz_A 113 AYAVKY-----QDHLKGLIVSGGLSSVPLTVKEMNRLIDE--------LPA----KYR--------------DAIKKYGS 161 (293)
T ss_dssp HHHHHH-----GGGEEEEEEESCCSBHHHHHHHHHHHHHT--------SCH----HHH--------------HHHHHHHH
T ss_pred HHHHhC-----chhhheEEecCCccChHHHHHHHHHHHHh--------cCH----HHH--------------HHHHHhhc
Confidence 999998 89999999998865421100000000000 000 000 00000000
Q ss_pred ccccCCHH---HHHHHHhhcc---CCCcHHHHHHHH--------HHH-hcCccc--ccCCccccccccCccCccEEEEec
Q 012210 340 AEDMMHPE---LLKKLVLNNF---CTIPAKLILQLT--------TAF-REGGLR--DRGGKFFYKDHIHKCNIPILAIAG 402 (468)
Q Consensus 340 ~~~~~~~~---~~~~~~~~~~---~~~~~~~~~~~~--------~~~-~~~~~~--~~~~~~~~~~~l~~I~vPvLiI~G 402 (468)
......+. ....++.... ...+......+. ... ....+. ......+....+.+|++|+|+|+|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G 241 (293)
T 1mtz_A 162 SGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISAIKIPTLITVG 241 (293)
T ss_dssp HTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTTTCBCTTTGGGCCSCEEEEEE
T ss_pred cCCcChHHHHHHHHHHHHhhcccccCchHHHHHhHhhhccchhhhhccCcceecccccccCCChhhhhccCCCCEEEEee
Confidence 00000000 0011111110 111221111110 000 000000 001122345578899999999999
Q ss_pred CCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 403 DQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 403 ~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
++| .+++..++.+.+.+|+. +++++ +++||+.+.+ .|+++.+.|.+||.++
T Consensus 242 ~~D-~~~~~~~~~~~~~~~~~--~~~~~--~~~gH~~~~e------~p~~~~~~i~~fl~~~ 292 (293)
T 1mtz_A 242 EYD-EVTPNVARVIHEKIAGS--ELHVF--RDCSHLTMWE------DREGYNKLLSDFILKH 292 (293)
T ss_dssp TTC-SSCHHHHHHHHHHSTTC--EEEEE--TTCCSCHHHH------SHHHHHHHHHHHHHTC
T ss_pred CCC-CCCHHHHHHHHHhCCCc--eEEEe--CCCCCCcccc------CHHHHHHHHHHHHHhc
Confidence 999 77888999999999986 88888 9999999998 8999999999999865
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 | Back alignment and structure |
|---|
Probab=99.82 E-value=4.5e-19 Score=172.44 Aligned_cols=257 Identities=14% Similarity=0.120 Sum_probs=144.3
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|++.+-...++.+...|+ . .|+|+++|+.|++..-.. . . . ...+|++++++ +|+.++++.+.
T Consensus 32 lvllHG~~~~~~~w~~~~~~L~---~-~~~via~Dl~G~G~S~~~--~-~----~--~~~~~~~~~~a-~dl~~ll~~l~ 97 (294)
T 1ehy_A 32 LLLLHGWPGFWWEWSKVIGPLA---E-HYDVIVPDLRGFGDSEKP--D-L----N--DLSKYSLDKAA-DDQAALLDALG 97 (294)
T ss_dssp EEEECCSSCCGGGGHHHHHHHH---T-TSEEEEECCTTSTTSCCC--C-T----T--CGGGGCHHHHH-HHHHHHHHHTT
T ss_pred EEEECCCCcchhhHHHHHHHHh---h-cCEEEecCCCCCCCCCCC--c-c----c--cccCcCHHHHH-HHHHHHHHHcC
Confidence 4443455454555666666666 4 599999999999763110 0 0 0 00135677886 89999888775
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhh-hcCCCCcchHh
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQ-ALNVPVVPLGA 315 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 315 (468)
.. ++++|||||||.+++.+|.++ |++|+++|+++++....... ...... ...... ....+ .
T Consensus 98 ~~------~~~lvGhS~Gg~va~~~A~~~-----P~~v~~lvl~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~-----~ 159 (294)
T 1ehy_A 98 IE------KAYVVGHDFAAIVLHKFIRKY-----SDRVIKAAIFDPIQPDFGPV-YFGLGH-VHESWYSQFHQL-----D 159 (294)
T ss_dssp CC------CEEEEEETHHHHHHHHHHHHT-----GGGEEEEEEECCSCTTC-------------CCHHHHHTTC-----H
T ss_pred CC------CEEEEEeChhHHHHHHHHHhC-----hhheeEEEEecCCCCCcchh-hccchh-ccCceEEEecCc-----c
Confidence 32 899999999999999999998 99999999999743211110 000000 000000 00000 0
Q ss_pred HHHHhcCCCCC---chhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCcccc-ccccC
Q 012210 316 LLTAAYPLSSS---PPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFY-KDHIH 391 (468)
Q Consensus 316 ~~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~ 391 (468)
+...+.. ... ..++..++............+.+..+...............+...+.. . ..... ...+.
T Consensus 160 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~l~ 232 (294)
T 1ehy_A 160 MAVEVVG-SSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIR-P-----DAALWTDLDHT 232 (294)
T ss_dssp HHHHHHT-SCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSS-S-----SCCCCCTGGGS
T ss_pred hhHHHhc-cchhHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHhcCCcccchHHHHHHHHHh-h-----hhhhcCCcccC
Confidence 0000000 000 001111111111111223333333332222111111111122222110 0 00001 12456
Q ss_pred ccCccEEEEecCCCCcCC-HHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 012210 392 KCNIPILAIAGDQDLICP-PEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 462 (468)
Q Consensus 392 ~I~vPvLiI~G~~D~ivp-~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~ 462 (468)
+|+||+|+|+|++|.++| .+..+.+.+.+|++ +++++ +++||+.|.| +|+++.+.|.+||+
T Consensus 233 ~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~~~~~--~~~~i--~~~gH~~~~e------~p~~~~~~i~~fl~ 294 (294)
T 1ehy_A 233 MSDLPVTMIWGLGDTCVPYAPLIEFVPKYYSNY--TMETI--EDCGHFLMVE------KPEIAIDRIKTAFR 294 (294)
T ss_dssp CBCSCEEEEEECCSSCCTTHHHHHHHHHHBSSE--EEEEE--TTCCSCHHHH------CHHHHHHHHHHHCC
T ss_pred cCCCCEEEEEeCCCCCcchHHHHHHHHHHcCCC--ceEEe--CCCCCChhhh------CHHHHHHHHHHHhC
Confidence 899999999999999998 46788888999976 88888 9999999998 99999999999973
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=99.82 E-value=1.1e-19 Score=176.99 Aligned_cols=229 Identities=17% Similarity=0.234 Sum_probs=137.2
Q ss_pred hhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEE
Q 012210 170 IRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAI 249 (468)
Q Consensus 170 i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lv 249 (468)
++.+...|+ ++|+|+++|+.|++..- . ...++++++++ +|+.++++.+.. .++++++
T Consensus 55 ~~~~~~~L~----~~~~vi~~Dl~G~G~S~-~------------~~~~~~~~~~~-~dl~~~l~~l~~-----~~~~~lv 111 (296)
T 1j1i_A 55 WRNVIPILA----RHYRVIAMDMLGFGKTA-K------------PDIEYTQDRRI-RHLHDFIKAMNF-----DGKVSIV 111 (296)
T ss_dssp HTTTHHHHT----TTSEEEEECCTTSTTSC-C------------CSSCCCHHHHH-HHHHHHHHHSCC-----SSCEEEE
T ss_pred HHHHHHHHh----hcCEEEEECCCCCCCCC-C------------CCCCCCHHHHH-HHHHHHHHhcCC-----CCCeEEE
Confidence 344555554 55999999999997631 0 01245677876 888888876632 0389999
Q ss_pred EEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCchh
Q 012210 250 GHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPY 329 (468)
Q Consensus 250 GhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (468)
||||||.+++.+|.++ |++|+++|++++.............+. .. ......
T Consensus 112 GhS~Gg~ia~~~A~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~---------~~---------------~~~~~~ 162 (296)
T 1j1i_A 112 GNSMGGATGLGVSVLH-----SELVNALVLMGSAGLVVEIHEDLRPII---------NY---------------DFTREG 162 (296)
T ss_dssp EEHHHHHHHHHHHHHC-----GGGEEEEEEESCCBCCCC-------------------C---------------CSCHHH
T ss_pred EEChhHHHHHHHHHhC-----hHhhhEEEEECCCCCCCCCCchHHHHh---------cc---------------cCCchH
Confidence 9999999999999998 899999999988653221110000000 00 000000
Q ss_pred HHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecCCCCcCC
Q 012210 330 VFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICP 409 (468)
Q Consensus 330 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~D~ivp 409 (468)
....+..+.........+.....+...........+..+....... ....+....+.+|++|+|+|+|++|.++|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~i~~P~Lii~G~~D~~~~ 237 (296)
T 1j1i_A 163 MVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQ-----GGLFYDPEFIRKVQVPTLVVQGKDDKVVP 237 (296)
T ss_dssp HHHHHHHHSCTTCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHH-----TSSBCCHHHHTTCCSCEEEEEETTCSSSC
T ss_pred HHHHHHHhccCcccccHHHHHHHHHHhhCcchhhHHHHHHHHHHhc-----ccccccHHHhhcCCCCEEEEEECCCcccC
Confidence 1111111111111112222221111100000011111111111100 00111234678899999999999999999
Q ss_pred HHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 410 PEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 410 ~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
++.++++.+.+++. +++++ +++||+.|.+ .|+++.+.|.+||.++.
T Consensus 238 ~~~~~~~~~~~~~~--~~~~i--~~~gH~~~~e------~p~~~~~~i~~fl~~~~ 283 (296)
T 1j1i_A 238 VETAYKFLDLIDDS--WGYII--PHCGHWAMIE------HPEDFANATLSFLSLRV 283 (296)
T ss_dssp HHHHHHHHHHCTTE--EEEEE--SSCCSCHHHH------SHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHCCCC--EEEEE--CCCCCCchhc------CHHHHHHHHHHHHhccC
Confidence 99999999999976 78888 9999999998 89999999999998764
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1.5e-19 Score=171.84 Aligned_cols=230 Identities=14% Similarity=0.211 Sum_probs=141.0
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|++.|-...++.++..|+ . .|+|+++|+.|++..-. . .++++++++ +|+.++++.+.
T Consensus 19 vvllHG~~~~~~~w~~~~~~L~---~-~~~via~Dl~G~G~S~~----------~----~~~~~~~~a-~dl~~~l~~l~ 79 (255)
T 3bf7_A 19 IVLVHGLFGSLDNLGVLARDLV---N-DHNIIQVDVRNHGLSPR----------E----PVMNYPAMA-QDLVDTLDALQ 79 (255)
T ss_dssp EEEECCTTCCTTTTHHHHHHHT---T-TSCEEEECCTTSTTSCC----------C----SCCCHHHHH-HHHHHHHHHHT
T ss_pred EEEEcCCcccHhHHHHHHHHHH---h-hCcEEEecCCCCCCCCC----------C----CCcCHHHHH-HHHHHHHHHcC
Confidence 4444555555555666777666 4 59999999999976311 0 135677886 99999998874
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcccc-ccCCc--hhhHHhhcccCchhhhcCCCCcch
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSL-DYTSS--KSTLKLLLPLADPAQALNVPVVPL 313 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 313 (468)
. ++++++||||||.+++.+|.++ |++|+++|++++.. ..... ......+.
T Consensus 80 ~------~~~~lvGhS~Gg~va~~~a~~~-----p~~v~~lvl~~~~p~~~~~~~~~~~~~~~~---------------- 132 (255)
T 3bf7_A 80 I------DKATFIGHSMGGKAVMALTALA-----PDRIDKLVAIDIAPVDYHVRRHDEIFAAIN---------------- 132 (255)
T ss_dssp C------SCEEEEEETHHHHHHHHHHHHC-----GGGEEEEEEESCCSSCCCSCCCHHHHHHHH----------------
T ss_pred C------CCeeEEeeCccHHHHHHHHHhC-----cHhhccEEEEcCCcccCCcccHHHHHHHHH----------------
Confidence 3 2899999999999999999998 89999999987532 21111 00000000
Q ss_pred HhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhcc----CCCcHHHHHHHHHHHhcCcccccCCccccccc
Q 012210 314 GALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNF----CTIPAKLILQLTTAFREGGLRDRGGKFFYKDH 389 (468)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (468)
................+.. .........++.... .......+......+.. ...
T Consensus 133 ----~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~ 190 (255)
T 3bf7_A 133 ----AVSESDAQTRQQAAAIMRQ------HLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVG------------WEK 190 (255)
T ss_dssp ----HHHHSCCCSHHHHHHHHTT------TCCCHHHHHHHHTTEETTEESSCHHHHHHTHHHHHC------------CCC
T ss_pred ----hccccccccHHHHHHHHhh------hcchhHHHHHHHHhccCCceeecHHHHHhhhhhccc------------ccc
Confidence 0000000000000000000 000111111111110 00111111111111100 123
Q ss_pred cCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 390 IHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 390 l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
+.+|++|+|+|+|++|.+++++.++.+.+.+|+. +++++ +++||+.|.| .|+.+.+.|.+||++|
T Consensus 191 l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~--~~~~i--~~~gH~~~~e------~p~~~~~~i~~fl~~~ 255 (255)
T 3bf7_A 191 IPAWDHPALFIPGGNSPYVSEQYRDDLLAQFPQA--RAHVI--AGAGHWVHAE------KPDAVLRAIRRYLNDH 255 (255)
T ss_dssp CCCCCSCEEEECBTTCSTTCGGGHHHHHHHCTTE--EECCB--TTCCSCHHHH------CHHHHHHHHHHHHHTC
T ss_pred ccccCCCeEEEECCCCCCCCHHHHHHHHHHCCCC--eEEEe--CCCCCccccC------CHHHHHHHHHHHHhcC
Confidence 6789999999999999999999999999999976 88887 9999999998 8999999999999875
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A | Back alignment and structure |
|---|
Probab=99.82 E-value=2.1e-19 Score=174.83 Aligned_cols=229 Identities=12% Similarity=0.144 Sum_probs=139.7
Q ss_pred hhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEE
Q 012210 170 IRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAI 249 (468)
Q Consensus 170 i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lv 249 (468)
+..+...|+ ++|+|+++|+.|++..-.. . ..+|++++++ +|+.++++.+.. ++++++
T Consensus 55 w~~~~~~L~----~~~~via~Dl~G~G~S~~~----------~--~~~~~~~~~a-~dl~~~l~~l~~------~~~~lv 111 (291)
T 2wue_A 55 FSRNIAVLA----RHFHVLAVDQPGYGHSDKR----------A--EHGQFNRYAA-MALKGLFDQLGL------GRVPLV 111 (291)
T ss_dssp TTTTHHHHT----TTSEEEEECCTTSTTSCCC----------S--CCSSHHHHHH-HHHHHHHHHHTC------CSEEEE
T ss_pred HHHHHHHHH----hcCEEEEECCCCCCCCCCC----------C--CCCcCHHHHH-HHHHHHHHHhCC------CCeEEE
Confidence 444555565 4599999999999763110 0 1145677886 899888887743 289999
Q ss_pred EEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCc-----hhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCC
Q 012210 250 GHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSS-----KSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLS 324 (468)
Q Consensus 250 GhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (468)
||||||.+++.+|.++ |++|+++|++++....... ...... +..... .
T Consensus 112 GhS~Gg~ia~~~A~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~--~ 164 (291)
T 2wue_A 112 GNALGGGTAVRFALDY-----PARAGRLVLMGPGGLSINLFAPDPTEGVKR--------------------LSKFSV--A 164 (291)
T ss_dssp EETHHHHHHHHHHHHS-----TTTEEEEEEESCSSSCCCSSSCSSCHHHHH--------------------HHHHHH--S
T ss_pred EEChhHHHHHHHHHhC-----hHhhcEEEEECCCCCCccccccccchhhHH--------------------HHHHhc--c
Confidence 9999999999999998 8999999999986532110 000000 000000 0
Q ss_pred CCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccc-cCCccccccccCccCccEEEEecC
Q 012210 325 SSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRD-RGGKFFYKDHIHKCNIPILAIAGD 403 (468)
Q Consensus 325 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~I~vPvLiI~G~ 403 (468)
........++..+........++.....+... ..+ ..+..+...... +.. ..........+.+|++|+|+|+|+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~i~~P~lvi~G~ 239 (291)
T 2wue_A 165 PTRENLEAFLRVMVYDKNLITPELVDQRFALA--STP-ESLTATRAMGKS--FAGADFEAGMMWREVYRLRQPVLLIWGR 239 (291)
T ss_dssp CCHHHHHHHHHTSCSSGGGSCHHHHHHHHHHH--TSH-HHHHHHHHHHHH--HTSTTGGGGCGGGTGGGCCSCEEEEEET
T ss_pred CCHHHHHHHHHHhccCcccCCHHHHHHHHHHh--cCc-hHHHHHHHHHhh--ccccccccchhHHHHhhCCCCeEEEecC
Confidence 00001111111111111111223222222111 111 111112111100 000 000011225688999999999999
Q ss_pred CCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 404 QDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 404 ~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
+|.++|++.++.+.+.+|++ +++++ +++||+.|.+ .|+++.+.|.+||++
T Consensus 240 ~D~~~~~~~~~~~~~~~p~~--~~~~i--~~~gH~~~~e------~p~~~~~~i~~fl~~ 289 (291)
T 2wue_A 240 EDRVNPLDGALVALKTIPRA--QLHVF--GQCGHWVQVE------KFDEFNKLTIEFLGG 289 (291)
T ss_dssp TCSSSCGGGGHHHHHHSTTE--EEEEE--SSCCSCHHHH------THHHHHHHHHHHTTC
T ss_pred CCCCCCHHHHHHHHHHCCCC--eEEEe--CCCCCChhhh------CHHHHHHHHHHHHhc
Confidence 99999999999999999976 88888 9999999998 899999999999975
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.82 E-value=3.3e-20 Score=179.88 Aligned_cols=248 Identities=18% Similarity=0.136 Sum_probs=140.9
Q ss_pred cccccccccccc-chhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHH
Q 012210 157 LLERRQSSAIAI-QIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYI 235 (468)
Q Consensus 157 ll~~~~~~G~~~-~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l 235 (468)
++-.|++.|-.. .++.++..| .+||+|+++|+.|++..-.. .....++++++++ +|+.++++++
T Consensus 28 vvllHG~~~~~~~~w~~~~~~L----~~~~~vi~~Dl~G~G~S~~~----------~~~~~~~~~~~~a-~dl~~ll~~l 92 (286)
T 2yys_A 28 LFVLHGGPGGNAYVLREGLQDY----LEGFRVVYFDQRGSGRSLEL----------PQDPRLFTVDALV-EDTLLLAEAL 92 (286)
T ss_dssp EEEECCTTTCCSHHHHHHHGGG----CTTSEEEEECCTTSTTSCCC----------CSCGGGCCHHHHH-HHHHHHHHHT
T ss_pred EEEECCCCCcchhHHHHHHHHh----cCCCEEEEECCCCCCCCCCC----------ccCcccCcHHHHH-HHHHHHHHHh
Confidence 344334333333 344444433 57999999999999763210 0000145788887 9999999887
Q ss_pred HhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHh
Q 012210 236 RAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGA 315 (468)
Q Consensus 236 ~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (468)
.. ++++++||||||.+++.+|.++ |+ |+++|++++..... .....+..... .... ......
T Consensus 93 ~~------~~~~lvGhS~Gg~ia~~~a~~~-----p~-v~~lvl~~~~~~~~---~~~~~~~~~~~---~~~~-~~~~~~ 153 (286)
T 2yys_A 93 GV------ERFGLLAHGFGAVVALEVLRRF-----PQ-AEGAILLAPWVNFP---WLAARLAEAAG---LAPL-PDPEEN 153 (286)
T ss_dssp TC------CSEEEEEETTHHHHHHHHHHHC-----TT-EEEEEEESCCCBHH---HHHHHHHHHTT---CCCC-SCHHHH
T ss_pred CC------CcEEEEEeCHHHHHHHHHHHhC-----cc-hheEEEeCCccCcH---HHHHHHHHHhc---cccc-hhHHHH
Confidence 43 2899999999999999999998 88 99999999865211 00000000000 0000 000000
Q ss_pred HHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCc
Q 012210 316 LLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNI 395 (468)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~v 395 (468)
+ ...+........+..+. ++........+.....+.. . ..+.. ...+ .+. .+ ...+....+.+|++
T Consensus 154 ~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~-~~~~~-~~~~--~~~--~~----~~~~~~~~l~~i~~ 219 (286)
T 2yys_A 154 L-KEALKREEPKALFDRLM--FPTPRGRMAYEWLAEGAGI-L-GSDAP-GLAF--LRN--GL----WRLDYTPYLTPERR 219 (286)
T ss_dssp H-HHHHHHSCHHHHHHHHH--CSSHHHHHHHHHHHHHTTC-C-CCSHH-HHHH--HHT--TG----GGCBCGGGCCCCSS
T ss_pred H-HHHhccCChHHHHHhhh--ccCCccccChHHHHHHHhh-c-ccccc-chhh--ccc--cc----ccCChhhhhhhcCC
Confidence 0 00000000000011111 0000000011111111111 1 01111 1111 111 01 11234567889999
Q ss_pred cEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 396 PILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 396 PvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
|+|+|+|++|.++|++ ++.+.+ +|++ +++++ +++||+.|.| .|+++.+.|.+||.+.
T Consensus 220 P~lvi~G~~D~~~~~~-~~~~~~-~~~~--~~~~i--~~~gH~~~~e------~p~~~~~~i~~fl~~~ 276 (286)
T 2yys_A 220 PLYVLVGERDGTSYPY-AEEVAS-RLRA--PIRVL--PEAGHYLWID------APEAFEEAFKEALAAL 276 (286)
T ss_dssp CEEEEEETTCTTTTTT-HHHHHH-HHTC--CEEEE--TTCCSSHHHH------CHHHHHHHHHHHHHTT
T ss_pred CEEEEEeCCCCcCCHh-HHHHHh-CCCC--CEEEe--CCCCCCcChh------hHHHHHHHHHHHHHhh
Confidence 9999999999999999 999999 9987 78888 9999999998 8999999999999874
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.82 E-value=4e-19 Score=171.78 Aligned_cols=225 Identities=13% Similarity=0.144 Sum_probs=132.8
Q ss_pred hcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHH
Q 012210 182 EEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAM 261 (468)
Q Consensus 182 ~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~ 261 (468)
.++|+|+++|+.|++..-.. ...++++++++ +|+.++++.+. .. +++++||||||.+++.+
T Consensus 64 ~~~~~vi~~D~~G~G~S~~~------------~~~~~~~~~~~-~~l~~~l~~l~----~~--~~~lvGhS~GG~ia~~~ 124 (289)
T 1u2e_A 64 EAGYRVILLDCPGWGKSDSV------------VNSGSRSDLNA-RILKSVVDQLD----IA--KIHLLGNSMGGHSSVAF 124 (289)
T ss_dssp HTTCEEEEECCTTSTTSCCC------------CCSSCHHHHHH-HHHHHHHHHTT----CC--CEEEEEETHHHHHHHHH
T ss_pred hcCCeEEEEcCCCCCCCCCC------------CccccCHHHHH-HHHHHHHHHhC----CC--ceEEEEECHhHHHHHHH
Confidence 35699999999999763110 00134566665 77777777653 33 89999999999999999
Q ss_pred HHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCchhHHHHHHHhhhcc
Q 012210 262 LSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAE 341 (468)
Q Consensus 262 a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 341 (468)
|.++ |++|+++|++++.......... . +......+... +. ......+..++.......
T Consensus 125 a~~~-----p~~v~~lvl~~~~~~~~~~~~~------~---------~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~ 182 (289)
T 1u2e_A 125 TLKW-----PERVGKLVLMGGGTGGMSLFTP------M---------PTEGIKRLNQL-YR-QPTIENLKLMMDIFVFDT 182 (289)
T ss_dssp HHHC-----GGGEEEEEEESCSCCCCCSSSC------S---------SCHHHHHHHHH-HH-SCCHHHHHHHHHTTSSCT
T ss_pred HHHC-----HHhhhEEEEECCCccccccccc------c---------chhhHHHHHHH-Hh-cchHHHHHHHHHHhhcCc
Confidence 9998 8999999999875431110000 0 00000000000 00 000000111111111111
Q ss_pred ccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecCCCCcCCHHHHHHHHHhCC
Q 012210 342 DMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLP 421 (468)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip 421 (468)
.....+......... ... ...+..+...+..... ...+....+.+|++|+|+|+|++|.++|++.++.+.+.++
T Consensus 183 ~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~----~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~ 256 (289)
T 1u2e_A 183 SDLTDALFEARLNNM-LSR-RDHLENFVKSLEANPK----QFPDFGPRLAEIKAQTLIVWGRNDRFVPMDAGLRLLSGIA 256 (289)
T ss_dssp TSCCHHHHHHHHHHH-HHT-HHHHHHHHHHHHHCSC----CSCCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHST
T ss_pred ccCCHHHHHHHHHHh-hcC-hhHHHHHHHHHHhccc----cccchhhHHhhcCCCeEEEeeCCCCccCHHHHHHHHhhCC
Confidence 111122222111100 001 1122222222211100 1122445788999999999999999999999999999999
Q ss_pred CCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 422 EDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 422 ~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
+. +++++ +++||+.|.+ .|+++.+.|.+||++
T Consensus 257 ~~--~~~~i--~~~gH~~~~e------~p~~~~~~i~~fl~~ 288 (289)
T 1u2e_A 257 GS--ELHIF--RDCGHWAQWE------HADAFNQLVLNFLAR 288 (289)
T ss_dssp TC--EEEEE--SSCCSCHHHH------THHHHHHHHHHHHTC
T ss_pred Cc--EEEEe--CCCCCchhhc------CHHHHHHHHHHHhcC
Confidence 87 88888 9999999998 899999999999974
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=2.1e-19 Score=172.43 Aligned_cols=245 Identities=16% Similarity=0.242 Sum_probs=145.9
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|++.+-...+..++..|+ .+||+|+++|+.|++..-.. ...+++++++ +|+.++++++.
T Consensus 26 vvllHG~~~~~~~~~~~~~~L~---~~g~~vi~~D~~G~G~S~~~-------------~~~~~~~~~~-~dl~~~l~~l~ 88 (279)
T 1hkh_A 26 VVLIHGYPLDGHSWERQTRELL---AQGYRVITYDRRGFGGSSKV-------------NTGYDYDTFA-ADLHTVLETLD 88 (279)
T ss_dssp EEEECCTTCCGGGGHHHHHHHH---HTTEEEEEECCTTSTTSCCC-------------SSCCSHHHHH-HHHHHHHHHHT
T ss_pred EEEEcCCCchhhHHhhhHHHHH---hCCcEEEEeCCCCCCCCCCC-------------CCCCCHHHHH-HHHHHHHHhcC
Confidence 3443444444555666777777 88999999999999763110 1245788887 99999999875
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcc-cccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHh
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRES-RLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGA 315 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~-~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (468)
. .+++++||||||.+++.+|.++ |+ +|+++|++++..+....... .+ ...+......
T Consensus 89 ~------~~~~lvGhS~Gg~va~~~a~~~-----p~~~v~~lvl~~~~~~~~~~~~~--------~~---~~~~~~~~~~ 146 (279)
T 1hkh_A 89 L------RDVVLVGFSMGTGELARYVARY-----GHERVAKLAFLASLEPFLVQRDD--------NP---EGVPQEVFDG 146 (279)
T ss_dssp C------CSEEEEEETHHHHHHHHHHHHH-----CSTTEEEEEEESCCCSBCBCBTT--------BT---TSBCHHHHHH
T ss_pred C------CceEEEEeChhHHHHHHHHHHc-----CccceeeEEEEccCCcccccCcC--------Cc---CCCcHHHHHH
Confidence 3 2899999999999999999998 77 99999999874332110000 00 0000000000
Q ss_pred HHHHhcCCCCCchhHHHHHHHhhhc----cccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccC
Q 012210 316 LLTAAYPLSSSPPYVFSWLNNLISA----EDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIH 391 (468)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 391 (468)
+...... ........+...++.. ......+....+............ ......+ ..++...+.
T Consensus 147 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----------~~~~~~~l~ 213 (279)
T 1hkh_A 147 IEAAAKG--DRFAWFTDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAA-YAVVPAW----------IEDFRSDVE 213 (279)
T ss_dssp HHHHHHH--CHHHHHHHHHHHHHTHHHHBTTTBCHHHHHHHHHHHHTSCTTHH-HHTHHHH----------TCBCHHHHH
T ss_pred HHHHhhh--hhhhhHHHHHhhhhhcccCCcccccHHHHHhhhhhhccCcHHHH-HHHHHHH----------hhchhhhHH
Confidence 0000000 0000011111111110 011122222222111111111111 1111111 012234567
Q ss_pred cc---CccEEEEecCCCCcCCHHHH-HHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 392 KC---NIPILAIAGDQDLICPPEAV-EETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 392 ~I---~vPvLiI~G~~D~ivp~~~~-~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
+| ++|+|+|+|++|.++|++.+ +.+.+.+++. +++++ ++++|+.+.+ .|+++.+.|.+||++
T Consensus 214 ~i~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~--~~~~i--~~~gH~~~~e------~p~~~~~~i~~fl~~ 279 (279)
T 1hkh_A 214 AVRAAGKPTLILHGTKDNILPIDATARRFHQAVPEA--DYVEV--EGAPHGLLWT------HADEVNAALKTFLAK 279 (279)
T ss_dssp HHHHHCCCEEEEEETTCSSSCTTTTHHHHHHHCTTS--EEEEE--TTCCTTHHHH------THHHHHHHHHHHHHC
T ss_pred HhccCCCCEEEEEcCCCccCChHHHHHHHHHhCCCe--eEEEe--CCCCccchhc------CHHHHHHHHHHHhhC
Confidence 78 99999999999999999877 8999999987 88888 9999999998 899999999999963
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.8e-19 Score=170.63 Aligned_cols=252 Identities=14% Similarity=0.124 Sum_probs=148.1
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|.+.+-...+..+++.|+ +||.|+++|+.|++..-... ...++++++++ +|+.++++++.
T Consensus 26 vv~~HG~~~~~~~~~~~~~~L~----~~~~vi~~d~~G~G~s~~~~-----------~~~~~~~~~~~-~~~~~~~~~l~ 89 (278)
T 3oos_A 26 LCVTHLYSEYNDNGNTFANPFT----DHYSVYLVNLKGCGNSDSAK-----------NDSEYSMTETI-KDLEAIREALY 89 (278)
T ss_dssp EEECCSSEECCTTCCTTTGGGG----GTSEEEEECCTTSTTSCCCS-----------SGGGGSHHHHH-HHHHHHHHHTT
T ss_pred EEEEcCCCcchHHHHHHHHHhh----cCceEEEEcCCCCCCCCCCC-----------CcccCcHHHHH-HHHHHHHHHhC
Confidence 4443444444445566666665 49999999999997632110 01234667776 78877777763
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhH
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAL 316 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
.+ +++++||||||.+++.+|.++ |++|+++|+++++......... ..... ............
T Consensus 90 ----~~--~~~lvG~S~Gg~~a~~~a~~~-----p~~v~~~vl~~~~~~~~~~~~~-~~~~~------~~~~~~~~~~~~ 151 (278)
T 3oos_A 90 ----IN--KWGFAGHSAGGMLALVYATEA-----QESLTKIIVGGAAASKEYASHK-DSIYC------SKNVKFNRIVSI 151 (278)
T ss_dssp ----CS--CEEEEEETHHHHHHHHHHHHH-----GGGEEEEEEESCCSBGGGGGST-TSTTS------TTSTTHHHHHHH
T ss_pred ----CC--eEEEEeecccHHHHHHHHHhC-----chhhCeEEEecCcccccccccc-chhhh------hhchhHHHHHHH
Confidence 23 999999999999999999998 8899999999987662111000 00000 000000000111
Q ss_pred HHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCc-HHHHHHHHHHHhcCcccccCCccccccccCccCc
Q 012210 317 LTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIP-AKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNI 395 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~v 395 (468)
+..+..... .......+..........+++.+..++........ ...+..+.. ..+ ...++...+.++++
T Consensus 152 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~----~~~~~~~~~~~i~~ 222 (278)
T 3oos_A 152 MNALNDDST-VQEERKALSREWALMSFYSEEKLEEALKLPNSGKTVGNRLNYFRQ----VEY----KDYDVRQKLKFVKI 222 (278)
T ss_dssp HHHHTCTTS-CHHHHHHHHHHHHHHHCSCHHHHHHHTTSCCCCEECHHHHHHHHH----TTG----GGCBCHHHHTTCCS
T ss_pred HHhhccccc-CchHHHHHHHHHhhcccCCcHHHHHHhhccccchhHHHHHHHhhh----ccc----ccccHHHHHhCCCC
Confidence 111111100 01111111111111112234444443332221111 122222211 001 12234457788999
Q ss_pred cEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHH
Q 012210 396 PILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFL 461 (468)
Q Consensus 396 PvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL 461 (468)
|+|+|+|++|.++|++.++.+.+.+++. +++++ ++++|+.+.+ .|+++.+.|.+||
T Consensus 223 P~l~i~g~~D~~~~~~~~~~~~~~~~~~--~~~~~--~~~gH~~~~~------~p~~~~~~i~~fl 278 (278)
T 3oos_A 223 PSFIYCGKHDVQCPYIFSCEIANLIPNA--TLTKF--EESNHNPFVE------EIDKFNQFVNDTL 278 (278)
T ss_dssp CEEEEEETTCSSSCHHHHHHHHHHSTTE--EEEEE--TTCSSCHHHH------SHHHHHHHHHHTC
T ss_pred CEEEEEeccCCCCCHHHHHHHHhhCCCc--EEEEc--CCcCCCcccc------cHHHHHHHHHhhC
Confidence 9999999999999999999999999875 88888 8999999998 9999999999986
|
| >4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A | Back alignment and structure |
|---|
Probab=99.82 E-value=9.8e-20 Score=171.91 Aligned_cols=247 Identities=11% Similarity=0.078 Sum_probs=149.0
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|.+.+-...+..+++.|+ . ||.|+++|+.|++..-. ..+.. ...+++++++ +|+.++++.+.
T Consensus 23 vv~~HG~~~~~~~~~~~~~~l~---~-g~~v~~~D~~G~G~S~~---~~~~~------~~~~~~~~~~-~~~~~~~~~~~ 88 (269)
T 4dnp_A 23 LVLAHGFGTDQSAWNRILPFFL---R-DYRVVLYDLVCAGSVNP---DFFDF------RRYTTLDPYV-DDLLHILDALG 88 (269)
T ss_dssp EEEECCTTCCGGGGTTTGGGGT---T-TCEEEEECCTTSTTSCG---GGCCT------TTCSSSHHHH-HHHHHHHHHTT
T ss_pred EEEEeCCCCcHHHHHHHHHHHh---C-CcEEEEEcCCCCCCCCC---CCCCc------cccCcHHHHH-HHHHHHHHhcC
Confidence 4554555555555666666666 5 99999999999876311 00000 0112566776 88888887763
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhH
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAL 316 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
. ++++++||||||.+++.+|.++ |++|+++|+++++........... .........+
T Consensus 89 ~------~~~~l~GhS~Gg~~a~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~------------~~~~~~~~~~ 145 (269)
T 4dnp_A 89 I------DCCAYVGHSVSAMIGILASIRR-----PELFSKLILIGASPRFLNDEDYHG------------GFEQGEIEKV 145 (269)
T ss_dssp C------CSEEEEEETHHHHHHHHHHHHC-----TTTEEEEEEESCCSCCBCBTTBCC------------SBCHHHHHHH
T ss_pred C------CeEEEEccCHHHHHHHHHHHhC-----cHhhceeEEeCCCCCCCChHHhcc------------ccchHHHHHH
Confidence 2 2999999999999999999997 889999999998654432210000 0000000111
Q ss_pred HHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCcc
Q 012210 317 LTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIP 396 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP 396 (468)
...... ....+...+...... ...++....+..... .........+...+.. .+....+.++++|
T Consensus 146 ~~~~~~--~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---------~~~~~~~~~i~~P 210 (269)
T 4dnp_A 146 FSAMEA--NYEAWVNGFAPLAVG---ADVPAAVREFSRTLF-NMRPDITLFVSRTVFN---------SDMRGVLGLVKVP 210 (269)
T ss_dssp HHHHHH--CHHHHHHHHHHHHHC---SSCHHHHHHHHHHHH-HSCHHHHHHHHHHHHT---------CCCGGGGGGCCSC
T ss_pred HHhccc--cHHHHHHHhhhhhcc---CCChhHHHHHHHHHH-ccCcchhhhHhhhhcc---------hhhHhhhccccCC
Confidence 110000 000001111111111 112233333222221 1222333333333221 2234678889999
Q ss_pred EEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 397 ILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 397 vLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
+|+|+|++|.++|++.++.+.+.+++. .+++++ ++++|+.+.+ .|+++.+.|.+||+++
T Consensus 211 ~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~--~~~gH~~~~~------~p~~~~~~i~~fl~~~ 269 (269)
T 4dnp_A 211 CHIFQTARDHSVPASVATYLKNHLGGK-NTVHWL--NIEGHLPHLS------APTLLAQELRRALSHR 269 (269)
T ss_dssp EEEEEEESBTTBCHHHHHHHHHHSSSC-EEEEEE--EEESSCHHHH------CHHHHHHHHHHHHC--
T ss_pred EEEEecCCCcccCHHHHHHHHHhCCCC-ceEEEe--CCCCCCcccc------CHHHHHHHHHHHHhhC
Confidence 999999999999999999999999973 578887 8899999997 8999999999999864
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1e-19 Score=178.88 Aligned_cols=258 Identities=12% Similarity=0.055 Sum_probs=143.8
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|++.+-...++.+...|+ .+||+||++|++|++..-.. ....+|++++++ +|+.++++.+.
T Consensus 50 vvllHG~~~~~~~w~~~~~~L~---~~g~rvia~Dl~G~G~S~~~-----------~~~~~y~~~~~a-~dl~~ll~~l~ 114 (310)
T 1b6g_A 50 FLCLHGEPTWSYLYRKMIPVFA---ESGARVIAPDFFGFGKSDKP-----------VDEEDYTFEFHR-NFLLALIERLD 114 (310)
T ss_dssp EEECCCTTCCGGGGTTTHHHHH---HTTCEEEEECCTTSTTSCEE-----------SCGGGCCHHHHH-HHHHHHHHHHT
T ss_pred EEEECCCCCchhhHHHHHHHHH---hCCCeEEEeCCCCCCCCCCC-----------CCcCCcCHHHHH-HHHHHHHHHcC
Confidence 3443444444455667778888 88999999999999763110 001246788887 99999999885
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCch-hhHHhhcccCchhhhcCCCCcchHh
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSK-STLKLLLPLADPAQALNVPVVPLGA 315 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (468)
.. ++++|||||||.+++.+|.++ |++|+++|++++........ .......... + .....
T Consensus 115 ~~------~~~lvGhS~Gg~va~~~A~~~-----P~rv~~Lvl~~~~~~~~~~~~~~~~~~~~~~-~--------~~~~~ 174 (310)
T 1b6g_A 115 LR------NITLVVQDWGGFLGLTLPMAD-----PSRFKRLIIMNAXLMTDPVTQPAFSAFVTQP-A--------DGFTA 174 (310)
T ss_dssp CC------SEEEEECTHHHHHHTTSGGGS-----GGGEEEEEEESCCCCCCTTTCTHHHHTTTSS-T--------TTHHH
T ss_pred CC------CEEEEEcChHHHHHHHHHHhC-----hHhheEEEEeccccccCCccccchhhhhhcc-c--------hHHHH
Confidence 43 999999999999999999998 99999999998854210100 0000000000 0 00000
Q ss_pred HHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccC-ccC
Q 012210 316 LLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIH-KCN 394 (468)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~I~ 394 (468)
............. ...+... . .....+....+...............+...+............+....+. +|+
T Consensus 175 ~~~~~~~~~~~~~--~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ 249 (310)
T 1b6g_A 175 WKYDLVTPSDLRL--DQFMKRW--A-PTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQAXIDISTEAISFWQNDWN 249 (310)
T ss_dssp HHHHHHSCSSCCH--HHHHHHH--S-TTCCHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHhccCchhhh--hhHHhhc--C-CCCCHHHHHHHhcccCCccchHHHHHHHHHhcccccchhhhhhhHhhhhhcccc
Confidence 0000000000000 0000000 0 11122222222111100000001111111110000000000001234567 899
Q ss_pred ccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 395 IPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 395 vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
||+|+|+|++|.++| +.++.+.+.+|++.....++ +++||+.|. +|++|.+.|.+||.+.
T Consensus 250 ~P~Lvi~G~~D~~~~-~~~~~~~~~ip~~~~~~i~~--~~~GH~~~~-------~p~~~~~~i~~Fl~~~ 309 (310)
T 1b6g_A 250 GQTFMAIGMKDKLLG-PDVMYPMKALINGCPEPLEI--ADAGHFVQE-------FGEQVAREALKHFAET 309 (310)
T ss_dssp SEEEEEEETTCSSSS-HHHHHHHHHHSTTCCCCEEE--TTCCSCGGG-------GHHHHHHHHHHHHHHT
T ss_pred CceEEEeccCcchhh-hHHHHHHHhcccccceeeec--CCcccchhh-------ChHHHHHHHHHHHhcc
Confidence 999999999999999 88999999999884444444 899999886 6799999999999864
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=99.81 E-value=4e-19 Score=171.43 Aligned_cols=229 Identities=16% Similarity=0.214 Sum_probs=136.9
Q ss_pred chhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhH----HhhhHHHHHHHHHhhcCCCCC
Q 012210 169 QIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHY----LEEDVPAAMEYIRAQSKPKDG 244 (468)
Q Consensus 169 ~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~----~~~D~~a~i~~l~~~~~~~~~ 244 (468)
.+..+...|+ ++|+|+++|+.|++..-.. . ...++++++ + +|+.++++.+.. +
T Consensus 47 ~~~~~~~~L~----~~~~vi~~D~~G~G~S~~~----------~--~~~~~~~~~~~~~~-~dl~~~l~~l~~------~ 103 (285)
T 1c4x_A 47 NWRPIIPDLA----ENFFVVAPDLIGFGQSEYP----------E--TYPGHIMSWVGMRV-EQILGLMNHFGI------E 103 (285)
T ss_dssp HHGGGHHHHH----TTSEEEEECCTTSTTSCCC----------S--SCCSSHHHHHHHHH-HHHHHHHHHHTC------S
T ss_pred hHHHHHHHHh----hCcEEEEecCCCCCCCCCC----------C--CcccchhhhhhhHH-HHHHHHHHHhCC------C
Confidence 3445555665 4699999999999763110 0 013467777 6 888888877643 2
Q ss_pred cEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCc-hhhHHhhcccCchhhhcCCCCcchHhHHHHhcCC
Q 012210 245 KLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSS-KSTLKLLLPLADPAQALNVPVVPLGALLTAAYPL 323 (468)
Q Consensus 245 ~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (468)
+++++||||||.+++.+|.++ |++|+++|++++....... ......+... ...+.
T Consensus 104 ~~~lvGhS~Gg~va~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~------~~~~~------------- 159 (285)
T 1c4x_A 104 KSHIVGNSMGGAVTLQLVVEA-----PERFDKVALMGSVGAPMNARPPELARLLAF------YADPR------------- 159 (285)
T ss_dssp SEEEEEETHHHHHHHHHHHHC-----GGGEEEEEEESCCSSCCSSCCHHHHHHHTG------GGSCC-------------
T ss_pred ccEEEEEChHHHHHHHHHHhC-----hHHhheEEEeccCCCCCCccchhHHHHHHH------hcccc-------------
Confidence 899999999999999999998 8999999999886532111 0001111000 00000
Q ss_pred CCCchhHHHHHHHhhhccccC--CHHHHHHHHhhccCCCcHHHHHHHHHHH--hcCcccccCCccccccccCccCccEEE
Q 012210 324 SSSPPYVFSWLNNLISAEDMM--HPELLKKLVLNNFCTIPAKLILQLTTAF--REGGLRDRGGKFFYKDHIHKCNIPILA 399 (468)
Q Consensus 324 ~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~I~vPvLi 399 (468)
......++..+....... ..+.+...+... . .......+...+ ... +.. ........+.+|++|+|+
T Consensus 160 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~l~~i~~P~li 230 (285)
T 1c4x_A 160 ---LTPYRELIHSFVYDPENFPGMEEIVKSRFEVA--N-DPEVRRIQEVMFESMKA-GME--SLVIPPATLGRLPHDVLV 230 (285)
T ss_dssp ---HHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHH--H-CHHHHHHHHHHHHHHSS-CCG--GGCCCHHHHTTCCSCEEE
T ss_pred ---HHHHHHHHHHhhcCcccccCcHHHHHHHHHhc--c-CHHHHHHHHHHhccccc-ccc--ccccchhhhccCCCCEEE
Confidence 000111111110000001 111111111100 0 011111121111 100 000 011123467889999999
Q ss_pred EecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 400 IAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 400 I~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
|+|++|.++|++.++.+.+.+++. +++++ +++||+.|.+ .|+++.+.|.+||.+
T Consensus 231 i~G~~D~~~p~~~~~~~~~~~~~~--~~~~i--~~~gH~~~~e------~p~~~~~~i~~fl~~ 284 (285)
T 1c4x_A 231 FHGRQDRIVPLDTSLYLTKHLKHA--ELVVL--DRCGHWAQLE------RWDAMGPMLMEHFRA 284 (285)
T ss_dssp EEETTCSSSCTHHHHHHHHHCSSE--EEEEE--SSCCSCHHHH------SHHHHHHHHHHHHHC
T ss_pred EEeCCCeeeCHHHHHHHHHhCCCc--eEEEe--CCCCcchhhc------CHHHHHHHHHHHHhc
Confidence 999999999999999999999976 88888 9999999998 899999999999975
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} | Back alignment and structure |
|---|
Probab=99.81 E-value=3.7e-19 Score=168.23 Aligned_cols=243 Identities=14% Similarity=0.075 Sum_probs=143.2
Q ss_pred ccccccccccccchhhHHHHHHhhhh-cCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIE-EGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYI 235 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~-~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l 235 (468)
++-.|++.|-...+..+...|+ . .||.|+++|+.|++..... .. +++++++ +|+.++++++
T Consensus 24 vv~lhG~~~~~~~~~~~~~~l~---~~~g~~v~~~d~~G~G~s~~~----------~~----~~~~~~~-~~~~~~l~~~ 85 (272)
T 3fsg_A 24 IIFLHGLSLDKQSTCLFFEPLS---NVGQYQRIYLDLPGMGNSDPI----------SP----STSDNVL-ETLIEAIEEI 85 (272)
T ss_dssp EEEECCTTCCHHHHHHHHTTST---TSTTSEEEEECCTTSTTCCCC----------SS----CSHHHHH-HHHHHHHHHH
T ss_pred EEEEeCCCCcHHHHHHHHHHHh---ccCceEEEEecCCCCCCCCCC----------CC----CCHHHHH-HHHHHHHHHH
Confidence 3443333333333344444444 5 6999999999998763111 00 5677886 8998888884
Q ss_pred HhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHh
Q 012210 236 RAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGA 315 (468)
Q Consensus 236 ~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (468)
.. . ++++++||||||.+++.+|.++ |++|+++|+++|................... ..
T Consensus 86 ~~---~--~~~~l~G~S~Gg~~a~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~----~~-------- 143 (272)
T 3fsg_A 86 IG---A--RRFILYGHSYGGYLAQAIAFHL-----KDQTLGVFLTCPVITADHSKRLTGKHINILE----ED-------- 143 (272)
T ss_dssp HT---T--CCEEEEEEEHHHHHHHHHHHHS-----GGGEEEEEEEEECSSCCGGGCCCCCCCCEEC----SC--------
T ss_pred hC---C--CcEEEEEeCchHHHHHHHHHhC-----hHhhheeEEECcccccCccccccccchhhhh----hh--------
Confidence 32 2 3999999999999999999997 8899999999987643322110000000000 00
Q ss_pred HHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhc---cCCCcHHHHHHHHHHHhcCcccccCCccccccccCc
Q 012210 316 LLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNN---FCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHK 392 (468)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 392 (468)
+.... .......+...... ..+.....+.... ...... .+...+... .....+....+.+
T Consensus 144 ----~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~----~~~~~~~~~~~~~ 206 (272)
T 3fsg_A 144 ----INPVE-NKEYFADFLSMNVI----INNQAWHDYQNLIIPGLQKEDK----TFIDQLQNN----YSFTFEEKLKNIN 206 (272)
T ss_dssp ----CCCCT-TGGGHHHHHHHCSE----ESHHHHHHHHHHTHHHHHHCCH----HHHHHHTTS----CSCTTHHHHTTCC
T ss_pred ----hhccc-CHHHHHHHHHHhcc----CCCchhHHHHHHhhhhhhhccH----HHHHHHhhh----cCCChhhhhhhcc
Confidence 00000 00001111111111 1122211111100 000111 111111110 0001111225688
Q ss_pred cCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccC
Q 012210 393 CNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 466 (468)
Q Consensus 393 I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~ 466 (468)
+++|+|+|+|++|.++|++.++.+.+.+++. +++++ ++++|+.+.+ .|+++.+.|.+||++...
T Consensus 207 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~--~~~~~--~~~gH~~~~~------~~~~~~~~i~~fl~~~~~ 270 (272)
T 3fsg_A 207 YQFPFKIMVGRNDQVVGYQEQLKLINHNENG--EIVLL--NRTGHNLMID------QREAVGFHFDLFLDELNS 270 (272)
T ss_dssp CSSCEEEEEETTCTTTCSHHHHHHHTTCTTE--EEEEE--SSCCSSHHHH------THHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEEeCCCCcCCHHHHHHHHHhcCCC--eEEEe--cCCCCCchhc------CHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999875 88888 8999999997 899999999999987653
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A | Back alignment and structure |
|---|
Probab=99.81 E-value=3.6e-19 Score=170.70 Aligned_cols=247 Identities=17% Similarity=0.196 Sum_probs=142.9
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|++.+-...+..++..|+ .+||+|+++|+.|++..-. . ..++++++++ +|+.++++++.
T Consensus 25 vvllHG~~~~~~~w~~~~~~L~---~~g~~vi~~D~~G~G~S~~-----------~--~~~~~~~~~~-~d~~~~l~~l~ 87 (276)
T 1zoi_A 25 IHFHHGWPLSADDWDAQLLFFL---AHGYRVVAHDRRGHGRSSQ-----------V--WDGHDMDHYA-DDVAAVVAHLG 87 (276)
T ss_dssp EEEECCTTCCGGGGHHHHHHHH---HTTCEEEEECCTTSTTSCC-----------C--SSCCSHHHHH-HHHHHHHHHHT
T ss_pred EEEECCCCcchhHHHHHHHHHH---hCCCEEEEecCCCCCCCCC-----------C--CCCCCHHHHH-HHHHHHHHHhC
Confidence 3443444444455666777777 8899999999999976311 0 1245788887 99999999885
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhH
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAL 316 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
.. +++++||||||.+++.+|+++. |++|+++|++++..+....... .+ ...+......+
T Consensus 88 ~~------~~~lvGhS~Gg~ia~~~a~~~~----p~~v~~lvl~~~~~~~~~~~~~--------~~---~~~~~~~~~~~ 146 (276)
T 1zoi_A 88 IQ------GAVHVGHSTGGGEVVRYMARHP----EDKVAKAVLIAAVPPLMVQTPG--------NP---GGLPKSVFDGF 146 (276)
T ss_dssp CT------TCEEEEETHHHHHHHHHHHHCT----TSCCCCEEEESCCCSCCBCCSS--------CT---TSBCHHHHHHH
T ss_pred CC------ceEEEEECccHHHHHHHHHHhC----HHheeeeEEecCCCcccccccc--------cc---ccccHHHHHHH
Confidence 33 8999999999999999887641 6799999999874322110000 00 00000000000
Q ss_pred HHHhcCCCCCchhHHHHHH-Hhhhc---cccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCc
Q 012210 317 LTAAYPLSSSPPYVFSWLN-NLISA---EDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHK 392 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 392 (468)
...... ....+...+.. .+... ......+....+........ ..........+.. .++...+.+
T Consensus 147 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---------~~~~~~l~~ 214 (276)
T 1zoi_A 147 QAQVAS--NRAQFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGMIGS-AKAHYDGIVAFSQ---------TDFTEDLKG 214 (276)
T ss_dssp HHHHHH--CHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSC-HHHHHHHHHHHHS---------CCCHHHHHH
T ss_pred HHHHHH--hHHHHHHHhhhccccccccccccccHHHHHHHHhhhhhhh-HHHHHHHHHHhcc---------cchhhhccc
Confidence 000000 00000000000 00000 00011222222111110011 1111111111111 123456788
Q ss_pred cCccEEEEecCCCCcCCHH-HHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 393 CNIPILAIAGDQDLICPPE-AVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 393 I~vPvLiI~G~~D~ivp~~-~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
|++|+|+|+|++|.++|++ ..+.+.+.+++. +++++ ++++|+.|.+ .|+++.+.|.+||++
T Consensus 215 i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~--~~~~i--~~~gH~~~~e------~p~~~~~~i~~fl~~ 276 (276)
T 1zoi_A 215 IQQPVLVMHGDDDQIVPYENSGVLSAKLLPNG--ALKTY--KGYPHGMPTT------HADVINADLLAFIRS 276 (276)
T ss_dssp CCSCEEEEEETTCSSSCSTTTHHHHHHHSTTE--EEEEE--TTCCTTHHHH------THHHHHHHHHHHHTC
T ss_pred cCCCEEEEEcCCCcccChHHHHHHHHhhCCCc--eEEEc--CCCCCchhhh------CHHHHHHHHHHHhcC
Confidence 9999999999999999988 566777888875 88888 9999999987 899999999999963
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-19 Score=174.70 Aligned_cols=264 Identities=13% Similarity=0.144 Sum_probs=154.7
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|++.+-...+..++..|. .+||.|+++|+.|++..-.. ..++++.+++ +|+.++++.+.
T Consensus 32 vv~~HG~~~~~~~~~~~~~~l~---~~g~~v~~~d~~G~G~S~~~-------------~~~~~~~~~~-~~~~~~~~~~~ 94 (309)
T 3u1t_A 32 VLFLHGNPTSSYLWRNIIPYVV---AAGYRAVAPDLIGMGDSAKP-------------DIEYRLQDHV-AYMDGFIDALG 94 (309)
T ss_dssp EEEECCTTCCGGGGTTTHHHHH---HTTCEEEEECCTTSTTSCCC-------------SSCCCHHHHH-HHHHHHHHHHT
T ss_pred EEEECCCcchhhhHHHHHHHHH---hCCCEEEEEccCCCCCCCCC-------------CcccCHHHHH-HHHHHHHHHcC
Confidence 4444555555556677777755 78999999999998763110 1145777886 88888888874
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcc-cCchhhhcCCCCcchHh
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLP-LADPAQALNVPVVPLGA 315 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 315 (468)
. ++++++||||||.+++.+|.++ |++|+++|+++++............+.. ..........+.
T Consensus 95 ~------~~~~lvGhS~Gg~~a~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 158 (309)
T 3u1t_A 95 L------DDMVLVIHDWGSVIGMRHARLN-----PDRVAAVAFMEALVPPALPMPSYEAMGPQLGPLFRDLRTAD----- 158 (309)
T ss_dssp C------CSEEEEEEEHHHHHHHHHHHHC-----TTTEEEEEEEEESCTTTCSBSCSGGGHHHHHHHHHHHTSTT-----
T ss_pred C------CceEEEEeCcHHHHHHHHHHhC-----hHhheEEEEeccCCCCccccccccccchhhhHHHHHHhccc-----
Confidence 3 2999999999999999999997 8899999999986654311000000000 000000000000
Q ss_pred HHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccC--CccccccccCcc
Q 012210 316 LLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRG--GKFFYKDHIHKC 393 (468)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~I 393 (468)
...... .....++..++... ........+....+...............+............. ...++...+.+|
T Consensus 159 ~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 235 (309)
T 3u1t_A 159 VGEKMV--LDGNFFVETILPEM-GVVRSLSEAEMAAYRAPFPTRQSRLPTLQWPREVPIGGEPAFAEAEVLKNGEWLMAS 235 (309)
T ss_dssp HHHHHH--TTTCHHHHTHHHHT-SCSSCCCHHHHHHHHTTCCSTGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHC
T ss_pred hhhhhc--cccceehhhhcccc-cccccCCHHHHHHHHHhcCCccccchHHHHHHHhccccccchhhhhhhhhhhhcccC
Confidence 000000 00011111111111 0111233444443333222222222222222221110000000 000223457789
Q ss_pred CccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccC
Q 012210 394 NIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 466 (468)
Q Consensus 394 ~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~ 466 (468)
++|+|+|+|++|.++|++.++.+.+.+++. +++++ ++++|+.+.+ .|+++.+.|.+||+++..
T Consensus 236 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~--~~~~~--~~~gH~~~~~------~p~~~~~~i~~fl~~~~~ 298 (309)
T 3u1t_A 236 PIPKLLFHAEPGALAPKPVVDYLSENVPNL--EVRFV--GAGTHFLQED------HPHLIGQGIADWLRRNKP 298 (309)
T ss_dssp CSCEEEEEEEECSSSCHHHHHHHHHHSTTE--EEEEE--EEESSCHHHH------CHHHHHHHHHHHHHHHCC
T ss_pred CCCEEEEecCCCCCCCHHHHHHHHhhCCCC--EEEEe--cCCcccchhh------CHHHHHHHHHHHHHhcch
Confidence 999999999999999999999999999986 67776 8899999997 899999999999998754
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A | Back alignment and structure |
|---|
Probab=99.81 E-value=1.7e-19 Score=173.79 Aligned_cols=259 Identities=11% Similarity=0.075 Sum_probs=153.5
Q ss_pred cccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHH
Q 012210 156 SLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYI 235 (468)
Q Consensus 156 ~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l 235 (468)
.++-.|++.|-...++.++..|+ .+ |+|+++|+.|++..... ..++++++++ +|+.++++++
T Consensus 32 ~vv~lHG~~~~~~~~~~~~~~L~---~~-~~vi~~D~~G~G~S~~~-------------~~~~~~~~~~-~~l~~~l~~l 93 (301)
T 3kda_A 32 LVMLVHGFGQTWYEWHQLMPELA---KR-FTVIAPDLPGLGQSEPP-------------KTGYSGEQVA-VYLHKLARQF 93 (301)
T ss_dssp EEEEECCTTCCGGGGTTTHHHHT---TT-SEEEEECCTTSTTCCCC-------------SSCSSHHHHH-HHHHHHHHHH
T ss_pred EEEEECCCCcchhHHHHHHHHHH---hc-CeEEEEcCCCCCCCCCC-------------CCCccHHHHH-HHHHHHHHHc
Confidence 34554555566666777888887 66 99999999999763111 2355788887 9999999887
Q ss_pred HhhcCCCCCc-EEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcch-
Q 012210 236 RAQSKPKDGK-LLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPL- 313 (468)
Q Consensus 236 ~~~~~~~~~~-v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 313 (468)
... + ++++||||||.+++.+|.++ |++|+++|+++++........... .. . ......+..
T Consensus 94 ~~~------~p~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~-~~----~--~~~~~~~~~~ 155 (301)
T 3kda_A 94 SPD------RPFDLVAHDIGIWNTYPMVVKN-----QADIARLVYMEAPIPDARIYRFPA-FT----A--QGESLVWHFS 155 (301)
T ss_dssp CSS------SCEEEEEETHHHHTTHHHHHHC-----GGGEEEEEEESSCCSSGGGGGSBS-EE----T--TEECSSTHHH
T ss_pred CCC------ccEEEEEeCccHHHHHHHHHhC-----hhhccEEEEEccCCCCCCccchhh-hc----c--hhhhhhhhHH
Confidence 432 6 99999999999999999998 889999999998653222110000 00 0 000000000
Q ss_pred -----HhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCcccccc
Q 012210 314 -----GALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKD 388 (468)
Q Consensus 314 -----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (468)
..+...+. ......++..++............+....+...............+...+... ......+..
T Consensus 156 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 230 (301)
T 3kda_A 156 FFAADDRLAETLI-AGKERFFLEHFIKSHASNTEVFSERLLDLYARSYAKPHSLNASFEYYRALNES----VRQNAELAK 230 (301)
T ss_dssp HHHCSTTHHHHHH-TTCHHHHHHHHHHHTCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHTHHHH----HHHHHHHTT
T ss_pred HhhcCcchHHHHh-ccchHHHHHHHHHhccCCcccCCHHHHHHHHHHhccccccchHHHHHHhhccc----hhhcccchh
Confidence 00000000 00001112222222222222334444443332221110001111111111000 000111223
Q ss_pred ccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccCC
Q 012210 389 HIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDSV 467 (468)
Q Consensus 389 ~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~~ 467 (468)
.+.+|++|+|+|+|++| +++...+.+.+.+++. +++++ +++||+.|.+ .|+++.+.|.+|+++....
T Consensus 231 ~l~~i~~P~l~i~G~~D--~~~~~~~~~~~~~~~~--~~~~i--~~~gH~~~~e------~p~~~~~~i~~~l~~~~~~ 297 (301)
T 3kda_A 231 TRLQMPTMTLAGGGAGG--MGTFQLEQMKAYAEDV--EGHVL--PGCGHWLPEE------CAAPMNRLVIDFLSRGRHH 297 (301)
T ss_dssp SCBCSCEEEEEECSTTS--CTTHHHHHHHTTBSSE--EEEEE--TTCCSCHHHH------THHHHHHHHHHHHTTSCCC
T ss_pred hccccCcceEEEecCCC--CChhHHHHHHhhcccC--eEEEc--CCCCcCchhh------CHHHHHHHHHHHHhhCchh
Confidence 45589999999999999 7788888999999976 88888 9999999998 9999999999999987643
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.7e-19 Score=174.73 Aligned_cols=246 Identities=12% Similarity=0.105 Sum_probs=141.0
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|++.+-...++.++..|+ .+||+|+++|+.|++..-... ...+|++++++ +|+.++++.+.
T Consensus 49 vvllHG~~~~~~~w~~~~~~L~---~~g~rvia~Dl~G~G~S~~~~-----------~~~~~~~~~~a-~dl~~ll~~l~ 113 (297)
T 2xt0_A 49 FLCLHGEPSWSFLYRKMLPVFT---AAGGRVVAPDLFGFGRSDKPT-----------DDAVYTFGFHR-RSLLAFLDALQ 113 (297)
T ss_dssp EEEECCTTCCGGGGTTTHHHHH---HTTCEEEEECCTTSTTSCEES-----------CGGGCCHHHHH-HHHHHHHHHHT
T ss_pred EEEECCCCCcceeHHHHHHHHH---hCCcEEEEeCCCCCCCCCCCC-----------CcccCCHHHHH-HHHHHHHHHhC
Confidence 3443444444455677788888 889999999999997631100 01256788887 99999998885
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCc-hhhHHhhcccCchhhhcCCCCcchHh
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSS-KSTLKLLLPLADPAQALNVPVVPLGA 315 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (468)
.. ++++|||||||.+++.+|.++ |++|+++|++++....... ......+... . ...+......
T Consensus 114 ~~------~~~lvGhS~Gg~va~~~A~~~-----P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~ 177 (297)
T 2xt0_A 114 LE------RVTLVCQDWGGILGLTLPVDR-----PQLVDRLIVMNTALAVGLSPGKGFESWRDF---V--ANSPDLDVGK 177 (297)
T ss_dssp CC------SEEEEECHHHHHHHTTHHHHC-----TTSEEEEEEESCCCCSSSCSCHHHHHHHHH---H--HTCTTCCHHH
T ss_pred CC------CEEEEEECchHHHHHHHHHhC-----hHHhcEEEEECCCCCcccCCchhHHHHHHH---h--hcccccchhH
Confidence 42 999999999999999999998 9999999999885421110 0000000000 0 0000000000
Q ss_pred HHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcC-cccccCCccccccccC-cc
Q 012210 316 LLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREG-GLRDRGGKFFYKDHIH-KC 393 (468)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~-~I 393 (468)
++.... .....+....+...............+....... .........+....+. +|
T Consensus 178 ~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i 237 (297)
T 2xt0_A 178 LMQRAI--------------------PGITDAEVAAYDAPFPGPEFKAGVRRFPAIVPITPDMEGAEIGRQAMSFWSTQW 237 (297)
T ss_dssp HHHHHS--------------------TTCCHHHHHHHHTTCSSGGGCHHHHHGGGGSCCSTTSTTHHHHHHHHHHHHHTC
T ss_pred HHhccC--------------------ccCCHHHHHHHhccccCcchhHHHHHHHHhCccccccchhhHHHHHHHHhhhcc
Confidence 000000 0111222221111100000000000000000000 0000000011224567 89
Q ss_pred CccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 394 NIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 394 ~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
+||+|+|+|++|.++| +..+++.+.+|++......+ +++||+.|. +|++|.+.|.+||++
T Consensus 238 ~~P~Lvi~G~~D~~~~-~~~~~~~~~~p~~~~~~~~~--~~~GH~~~~-------~p~~~~~~i~~fl~~ 297 (297)
T 2xt0_A 238 SGPTFMAVGAQDPVLG-PEVMGMLRQAIRGCPEPMIV--EAGGHFVQE-------HGEPIARAALAAFGQ 297 (297)
T ss_dssp CSCEEEEEETTCSSSS-HHHHHHHHHHSTTCCCCEEE--TTCCSSGGG-------GCHHHHHHHHHHTTC
T ss_pred CCCeEEEEeCCCcccC-hHHHHHHHhCCCCeeEEecc--CCCCcCccc-------CHHHHHHHHHHHHhC
Confidence 9999999999999999 88899999999874433335 889999885 579999999999863
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.2e-19 Score=170.52 Aligned_cols=250 Identities=14% Similarity=0.149 Sum_probs=152.3
Q ss_pred cccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeec-CChhhHHhhhHHHHHHH
Q 012210 156 SLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYD-WDFDHYLEEDVPAAMEY 234 (468)
Q Consensus 156 ~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D-~~~~~~~~~D~~a~i~~ 234 (468)
.++-.|.+.|-...++.+++.|+ . ||.|+++|+.|++..-.... .... +++++++ +|+.+++++
T Consensus 30 ~vv~lHG~~~~~~~~~~~~~~l~---~-g~~v~~~d~~G~G~s~~~~~----------~~~~~~~~~~~~-~~~~~~~~~ 94 (282)
T 3qvm_A 30 TVLLAHGFGCDQNMWRFMLPELE---K-QFTVIVFDYVGSGQSDLESF----------STKRYSSLEGYA-KDVEEILVA 94 (282)
T ss_dssp EEEEECCTTCCGGGGTTTHHHHH---T-TSEEEECCCTTSTTSCGGGC----------CTTGGGSHHHHH-HHHHHHHHH
T ss_pred eEEEECCCCCCcchHHHHHHHHh---c-CceEEEEecCCCCCCCCCCC----------CccccccHHHHH-HHHHHHHHH
Confidence 35555666666667778888887 5 99999999999876321100 0001 1566665 787777777
Q ss_pred HHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchH
Q 012210 235 IRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLG 314 (468)
Q Consensus 235 l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (468)
+. . ++++++||||||.+++.+|.++ |++|+++|++++............ ..+. .....
T Consensus 95 ~~----~--~~~~lvG~S~Gg~~a~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~--~~~~---------~~~~~ 152 (282)
T 3qvm_A 95 LD----L--VNVSIIGHSVSSIIAGIASTHV-----GDRISDITMICPSPCFMNFPPDYV--GGFE---------RDDLE 152 (282)
T ss_dssp TT----C--CSEEEEEETHHHHHHHHHHHHH-----GGGEEEEEEESCCSBSBEETTTEE--CSBC---------HHHHH
T ss_pred cC----C--CceEEEEecccHHHHHHHHHhC-----chhhheEEEecCcchhccCchhhh--chhc---------cccHH
Confidence 63 2 3999999999999999999987 889999999998665433210000 0000 00000
Q ss_pred hHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccC
Q 012210 315 ALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCN 394 (468)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~ 394 (468)
.+...... ........+...... ....+.....+.... ..........+...... .++...+.+++
T Consensus 153 ~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---------~~~~~~~~~i~ 218 (282)
T 3qvm_A 153 ELINLMDK---NYIGWANYLAPLVMG-ASHSSELIGELSGSF-CTTDPIVAKTFAKATFF---------SDYRSLLEDIS 218 (282)
T ss_dssp HHHHHHHH---CHHHHHHHHHHHHHC-TTSCHHHHHHHHHHH-HHSCHHHHHHHHHHHHS---------CBCGGGGGGCC
T ss_pred HHHHHHhc---chhhHHHHHHhhccC-CccchhhHHHHHHHH-hcCCcHHHHHHHHHHhc---------ccHHHHHhcCC
Confidence 00000000 000000111111100 111222222221111 11222333333333221 22346788899
Q ss_pred ccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccC
Q 012210 395 IPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 466 (468)
Q Consensus 395 vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~ 466 (468)
+|+|+|+|++|.++|++.++.+.+.+++. +++++ ++++|+.+.+ .++++.+.|.+||+++..
T Consensus 219 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~--~~~~~--~~~gH~~~~~------~~~~~~~~i~~fl~~~~~ 280 (282)
T 3qvm_A 219 TPALIFQSAKDSLASPEVGQYMAENIPNS--QLELI--QAEGHCLHMT------DAGLITPLLIHFIQNNQT 280 (282)
T ss_dssp SCEEEEEEEECTTCCHHHHHHHHHHSSSE--EEEEE--EEESSCHHHH------CHHHHHHHHHHHHHHC--
T ss_pred CCeEEEEeCCCCcCCHHHHHHHHHhCCCC--cEEEe--cCCCCccccc------CHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999976 88888 8899999987 899999999999998754
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.1e-18 Score=167.12 Aligned_cols=244 Identities=16% Similarity=0.186 Sum_probs=154.2
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|++.+-...+..+++.|+ .+||.|+++|+.|++..... . ...+++.+++ +|+.++++++.
T Consensus 45 vv~~hG~~~~~~~~~~~~~~l~---~~g~~v~~~d~~G~G~s~~~----------~--~~~~~~~~~~-~d~~~~l~~l~ 108 (303)
T 3pe6_A 45 IFVSHGAGEHSGRYEELARMLM---GLDLLVFAHDHVGHGQSEGE----------R--MVVSDFHVFV-RDVLQHVDSMQ 108 (303)
T ss_dssp EEEECCTTCCGGGGHHHHHHHH---HTTEEEEEECCTTSTTSCSS----------T--TCCSSTHHHH-HHHHHHHHHHH
T ss_pred EEEECCCCchhhHHHHHHHHHH---hCCCcEEEeCCCCCCCCCCC----------C--CCCCCHHHHH-HHHHHHHHHHh
Confidence 4554555555567778888888 88999999999998763210 0 0123567776 99999999999
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhH
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAL 316 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
...+.. +++++||||||.+++.+|.++ |++|+++|++++.......... ..... ...+
T Consensus 109 ~~~~~~--~~~l~G~S~Gg~~a~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~--~~~~~-------------~~~~ 166 (303)
T 3pe6_A 109 KDYPGL--PVFLLGHSMGGAIAILTAAER-----PGHFAGMVLISPLVLANPESAT--TFKVL-------------AAKV 166 (303)
T ss_dssp HHSTTC--CEEEEEETHHHHHHHHHHHHS-----TTTCSEEEEESCSSSBCHHHHH--HHHHH-------------HHHH
T ss_pred hccCCc--eEEEEEeCHHHHHHHHHHHhC-----cccccEEEEECccccCchhccH--HHHHH-------------HHHH
Confidence 886544 999999999999999999997 8899999999987654322110 00000 0011
Q ss_pred HHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhcc---CCCcHHHHHHHHHHHhcCcccccCCccccccccCcc
Q 012210 317 LTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNF---CTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKC 393 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I 393 (468)
.....+..........+ ..........+..... ............... .++...+.+|
T Consensus 167 ~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~i 227 (303)
T 3pe6_A 167 LNSVLPNLSSGPIDSSV--------LSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAV-----------SRVERALPKL 227 (303)
T ss_dssp HHTTCCSCCCCCCCGGG--------TCSCHHHHHHHHTCTTSCCSCCCHHHHHHHHHHH-----------HHHHHHGGGC
T ss_pred HHHhcccccCCccchhh--------hhcchhHHHHhccCccccccchhhhhHHHHHHHH-----------HHHHHHhhcC
Confidence 11111100000000000 0012222222222111 111122222221111 1123467889
Q ss_pred CccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchh---hHHHHHHHHHhhcc
Q 012210 394 NIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVE---QVYPCIVQFLGRYD 465 (468)
Q Consensus 394 ~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe---~v~~~I~~FL~~~~ 465 (468)
++|+|+|+|++|.+++++.++.+.+.+++...+++++ ++++|+.+.+ .++ ++...+.+||+++.
T Consensus 228 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~--~~~gH~~~~~------~p~~~~~~~~~~~~~l~~~~ 294 (303)
T 3pe6_A 228 TVPFLLLQGSADRLCDSKGAYLLMELAKSQDKTLKIY--EGAYHVLHKE------LPEVTNSVFHEINMWVSQRT 294 (303)
T ss_dssp CSCEEEEEETTCSSBCHHHHHHHHHHCCCSSEEEEEE--TTCCSCGGGS------CHHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeeCCCCCCChHHHHHHHHhcccCCceEEEe--CCCccceecc------chHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999999999655688888 8999999987 554 56677899998875
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.80 E-value=4.5e-19 Score=171.37 Aligned_cols=250 Identities=14% Similarity=0.141 Sum_probs=149.2
Q ss_pred cccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHH
Q 012210 156 SLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYI 235 (468)
Q Consensus 156 ~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l 235 (468)
.++-.|.+.|-...+..+++.|+ .+||.|+++|+.|++..-.. ...++++++++ +|+.++++.+
T Consensus 48 ~vv~~hG~~~~~~~~~~~~~~l~---~~g~~v~~~d~~G~G~s~~~------------~~~~~~~~~~~-~~~~~~~~~~ 111 (315)
T 4f0j_A 48 TILLMHGKNFCAGTWERTIDVLA---DAGYRVIAVDQVGFCKSSKP------------AHYQYSFQQLA-ANTHALLERL 111 (315)
T ss_dssp EEEEECCTTCCGGGGHHHHHHHH---HTTCEEEEECCTTSTTSCCC------------SSCCCCHHHHH-HHHHHHHHHT
T ss_pred eEEEEcCCCCcchHHHHHHHHHH---HCCCeEEEeecCCCCCCCCC------------CccccCHHHHH-HHHHHHHHHh
Confidence 35555666666667788888888 88999999999998763111 01244666775 7777777665
Q ss_pred HhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHh
Q 012210 236 RAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGA 315 (468)
Q Consensus 236 ~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (468)
. .+ +++++||||||.+++.+|.++ |++|+++|+++++...... .. ..+......
T Consensus 112 ~----~~--~~~l~G~S~Gg~~a~~~a~~~-----p~~v~~lvl~~~~~~~~~~----~~-----------~~~~~~~~~ 165 (315)
T 4f0j_A 112 G----VA--RASVIGHSMGGMLATRYALLY-----PRQVERLVLVNPIGLEDWK----AL-----------GVPWRSVDD 165 (315)
T ss_dssp T----CS--CEEEEEETHHHHHHHHHHHHC-----GGGEEEEEEESCSCSSCHH----HH-----------TCCCCCHHH
T ss_pred C----CC--ceEEEEecHHHHHHHHHHHhC-----cHhhheeEEecCcccCCcc----cc-----------cchhhhhHH
Confidence 3 33 999999999999999999997 8899999999985422110 00 000000111
Q ss_pred HHHHhcCCCCCchhHHHHHHHhhhccc-cCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccC
Q 012210 316 LLTAAYPLSSSPPYVFSWLNNLISAED-MMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCN 394 (468)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~ 394 (468)
+...... ........+......... ........................ +........+ ...+....+.+++
T Consensus 166 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~l~~~~ 238 (315)
T 4f0j_A 166 WYRRDLQ--TSAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRESVA-WNSALTYDMI----FTQPVVYELDRLQ 238 (315)
T ss_dssp HHHHHTT--CCHHHHHHHHHHHTSTTCCCGGGHHHHHHHHHHTTSTTHHHHH-HHHHHHHHHH----HHCCCGGGGGGCC
T ss_pred HHhhccc--CChHHHHHHHHHHHhccccCCchHHHHHHHHHHhhccCcchhh-HHHHHhcCcc----ccchhhhhcccCC
Confidence 1111100 001111111111111110 001111111111111111111111 1100000000 0112345788999
Q ss_pred ccEEEEecCCCCcCC----------------HHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHH
Q 012210 395 IPILAIAGDQDLICP----------------PEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIV 458 (468)
Q Consensus 395 vPvLiI~G~~D~ivp----------------~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~ 458 (468)
+|+|+|+|++|.++| .+.++.+.+.+++. +++++ ++++|+.+.+ .|+++.+.|.
T Consensus 239 ~P~lii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~gH~~~~~------~p~~~~~~i~ 308 (315)
T 4f0j_A 239 MPTLLLIGEKDNTAIGKDAAPAELKARLGNYAQLGKDAARRIPQA--TLVEF--PDLGHTPQIQ------APERFHQALL 308 (315)
T ss_dssp SCEEEEEETTCCCCTTGGGSCHHHHTTSCCHHHHHHHHHHHSTTE--EEEEE--TTCCSCHHHH------SHHHHHHHHH
T ss_pred CCeEEEEecCCCcCccccccccccccccccchhhhhHHHhhcCCc--eEEEe--CCCCcchhhh------CHHHHHHHHH
Confidence 999999999999999 88889999999875 88888 9999999997 8999999999
Q ss_pred HHHhhc
Q 012210 459 QFLGRY 464 (468)
Q Consensus 459 ~FL~~~ 464 (468)
+||+++
T Consensus 309 ~fl~~~ 314 (315)
T 4f0j_A 309 EGLQTQ 314 (315)
T ss_dssp HHHCC-
T ss_pred HHhccC
Confidence 999875
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.4e-18 Score=165.30 Aligned_cols=228 Identities=16% Similarity=0.230 Sum_probs=150.3
Q ss_pred ccccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHH
Q 012210 155 SSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEY 234 (468)
Q Consensus 155 ~~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~ 234 (468)
+.++-.+.+.|-...+..+++.|+ .+||.|+++|+.|++.. ... ...+++.+++ +|+.+++++
T Consensus 41 ~~vv~~HG~~~~~~~~~~~~~~l~---~~G~~v~~~d~~G~G~s----~~~---------~~~~~~~~~~-~d~~~~i~~ 103 (270)
T 3rm3_A 41 VGVLLVHGFTGTPHSMRPLAEAYA---KAGYTVCLPRLKGHGTH----YED---------MERTTFHDWV-ASVEEGYGW 103 (270)
T ss_dssp EEEEEECCTTCCGGGTHHHHHHHH---HTTCEEEECCCTTCSSC----HHH---------HHTCCHHHHH-HHHHHHHHH
T ss_pred eEEEEECCCCCChhHHHHHHHHHH---HCCCEEEEeCCCCCCCC----ccc---------cccCCHHHHH-HHHHHHHHH
Confidence 344454455555566777888888 88999999999998652 111 1134677876 999999999
Q ss_pred HHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchH
Q 012210 235 IRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLG 314 (468)
Q Consensus 235 l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (468)
+... . .+++++||||||.+++.+|..+ |+ |+++|+++++....... ..+........
T Consensus 104 l~~~--~--~~i~l~G~S~Gg~~a~~~a~~~-----p~-v~~~v~~~~~~~~~~~~---~~~~~~~~~~~---------- 160 (270)
T 3rm3_A 104 LKQR--C--QTIFVTGLSMGGTLTLYLAEHH-----PD-ICGIVPINAAVDIPAIA---AGMTGGGELPR---------- 160 (270)
T ss_dssp HHTT--C--SEEEEEEETHHHHHHHHHHHHC-----TT-CCEEEEESCCSCCHHHH---HHSCC---CCS----------
T ss_pred HHhh--C--CcEEEEEEcHhHHHHHHHHHhC-----CC-ccEEEEEcceecccccc---cchhcchhHHH----------
Confidence 9865 2 3999999999999999999996 66 99999999876542211 11100000000
Q ss_pred hHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccC
Q 012210 315 ALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCN 394 (468)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~ 394 (468)
++....+..... .. . .......+......+..... ++...+.+++
T Consensus 161 -~~~~~~~~~~~~--------------~~-~--------~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~ 205 (270)
T 3rm3_A 161 -YLDSIGSDLKNP--------------DV-K--------ELAYEKTPTASLLQLARLMA-----------QTKAKLDRIV 205 (270)
T ss_dssp -EEECCCCCCSCT--------------TC-C--------CCCCSEEEHHHHHHHHHHHH-----------HHHHTGGGCC
T ss_pred -HHHHhCcccccc--------------ch-H--------hhcccccChhHHHHHHHHHH-----------HHHhhhhhcC
Confidence 000000000000 00 0 00011122222222222211 1234577889
Q ss_pred ccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccch-hhHHHHHHHHHhhcc
Q 012210 395 IPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAV-EQVYPCIVQFLGRYD 465 (468)
Q Consensus 395 vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~p-e~v~~~I~~FL~~~~ 465 (468)
+|+|+++|++|.++|++.++.+.+.+++..++++++ ++++|..+.+ .+ +++.+.|.+||+++.
T Consensus 206 ~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~--~~~gH~~~~~------~~~~~~~~~i~~fl~~~~ 269 (270)
T 3rm3_A 206 CPALIFVSDEDHVVPPGNADIIFQGISSTEKEIVRL--RNSYHVATLD------YDQPMIIERSLEFFAKHA 269 (270)
T ss_dssp SCEEEEEETTCSSSCTTHHHHHHHHSCCSSEEEEEE--SSCCSCGGGS------TTHHHHHHHHHHHHHHHC
T ss_pred CCEEEEECCCCcccCHHHHHHHHHhcCCCcceEEEe--CCCCcccccC------ccHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999877788888 8999999987 44 889999999999764
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.3e-18 Score=164.65 Aligned_cols=249 Identities=12% Similarity=0.082 Sum_probs=147.1
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|.+.|-...+..+++.|+ .+||.|+++|+.|++...... ...+++.+++ +|+.++++.+.
T Consensus 15 vvllHG~~~~~~~~~~~~~~l~---~~g~~v~~~D~~G~G~S~~~~------------~~~~~~~~~~-~~~~~~l~~l~ 78 (267)
T 3sty_A 15 FVLVHAAFHGAWCWYKIVALMR---SSGHNVTALDLGASGINPKQA------------LQIPNFSDYL-SPLMEFMASLP 78 (267)
T ss_dssp EEEECCTTCCGGGGHHHHHHHH---HTTCEEEEECCTTSTTCSCCG------------GGCCSHHHHH-HHHHHHHHTSC
T ss_pred EEEECCCCCCcchHHHHHHHHH---hcCCeEEEeccccCCCCCCcC------------CccCCHHHHH-HHHHHHHHhcC
Confidence 4555666666677788888888 889999999999997642210 0124677776 88888887762
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhH
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAL 316 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
.. ++++++||||||.+++.+|.++ |++|+++|+++++........ ......................
T Consensus 79 ---~~--~~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-- 145 (267)
T 3sty_A 79 ---AN--EKIILVGHALGGLAISKAMETF-----PEKISVAVFLSGLMPGPNIDA-TTVCTKAGSAVLGQLDNCVTYE-- 145 (267)
T ss_dssp ---TT--SCEEEEEETTHHHHHHHHHHHS-----GGGEEEEEEESCCCCBTTBCH-HHHHHHHHHTTTTCTTCEEECT--
T ss_pred ---CC--CCEEEEEEcHHHHHHHHHHHhC-----hhhcceEEEecCCCCCCcchH-HHHHHHhcccchhhhhhhhhhh--
Confidence 12 3999999999999999999998 899999999998665433211 0000000000000000000000
Q ss_pred HHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccc---cCCccccccccCcc
Q 012210 317 LTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRD---RGGKFFYKDHIHKC 393 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~I 393 (468)
...... ..........+...+. ...+......+........... ... ..........
T Consensus 146 --~~~~~~--------------~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 205 (267)
T 3sty_A 146 --NGPTNP--------------PTTLIAGPKFLATNVY---HLSPIEDLALATALVRPLYLYLAEDISK-EVVLSSKRYG 205 (267)
T ss_dssp --TCTTSC--------------CCEEECCHHHHHHHTS---TTSCHHHHHHHHHHCCCEECCCHHHHHH-HCCCCTTTGG
T ss_pred --hhhhcc--------------cchhhhhHHHHHHhhc---ccCCHHHHHHHHHhhccchhHHHHHhhc-chhccccccc
Confidence 000000 0000011221111111 1111221211111111100000 000 0001112223
Q ss_pred CccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 394 NIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 394 ~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
++|+|+|+|++|.++|++..+.+.+.+++. +++++ +++||+.+.+ .|+++.+.|.+|++++
T Consensus 206 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~--~~~~i--~~~gH~~~~e------~p~~~~~~i~~fl~~~ 266 (267)
T 3sty_A 206 SVKRVFIVATENDALKKEFLKLMIEKNPPD--EVKEI--EGSDHVTMMS------KPQQLFTTLLSIANKY 266 (267)
T ss_dssp GSCEEEEECCCSCHHHHHHHHHHHHHSCCS--EEEEC--TTCCSCHHHH------SHHHHHHHHHHHHHHC
T ss_pred CCCEEEEEeCCCCccCHHHHHHHHHhCCCc--eEEEe--CCCCcccccc------ChHHHHHHHHHHHHhc
Confidence 799999999999999999999999999986 88888 9999999998 9999999999999876
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.4e-18 Score=171.36 Aligned_cols=243 Identities=16% Similarity=0.198 Sum_probs=156.0
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.+.+.+-...+..+++.|+ .+||.|+++|+.|++..... . ...+++.+++ +|+.++++++.
T Consensus 63 vv~~HG~~~~~~~~~~~~~~l~---~~g~~vi~~D~~G~G~S~~~----------~--~~~~~~~~~~-~d~~~~l~~l~ 126 (342)
T 3hju_A 63 IFVSHGAGEHSGRYEELARMLM---GLDLLVFAHDHVGHGQSEGE----------R--MVVSDFHVFV-RDVLQHVDSMQ 126 (342)
T ss_dssp EEEECCTTCCGGGGHHHHHHHH---TTTEEEEEECCTTSTTSCSS----------T--TCCSCTHHHH-HHHHHHHHHHH
T ss_pred EEEECCCCcccchHHHHHHHHH---hCCCeEEEEcCCCCcCCCCc----------C--CCcCcHHHHH-HHHHHHHHHHH
Confidence 4555666666667788888888 88999999999998763210 0 1123567776 99999999999
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhh-HHhhcccCchhhhcCCCCcchHh
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKST-LKLLLPLADPAQALNVPVVPLGA 315 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 315 (468)
...+.. +++++||||||.+++.+|.++ |++|+++|++++.......... .... ...
T Consensus 127 ~~~~~~--~v~l~G~S~Gg~~a~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~----------------~~~ 183 (342)
T 3hju_A 127 KDYPGL--PVFLLGHSMGGAIAILTAAER-----PGHFAGMVLISPLVLANPESATTFKVL----------------AAK 183 (342)
T ss_dssp HHSTTC--CEEEEEETHHHHHHHHHHHHS-----TTTCSEEEEESCCCSCCTTTTSHHHHH----------------HHH
T ss_pred HhCCCC--cEEEEEeChHHHHHHHHHHhC-----ccccceEEEECcccccchhhhhHHHHH----------------HHH
Confidence 886544 999999999999999999997 8899999999987665432110 0000 011
Q ss_pred HHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhcc---CCCcHHHHHHHHHHHhcCcccccCCccccccccCc
Q 012210 316 LLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNF---CTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHK 392 (468)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 392 (468)
++..+.+........ .............+..... ..........+.... .++...+.+
T Consensus 184 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~ 244 (342)
T 3hju_A 184 VLNLVLPNLSLGPID--------SSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAV-----------SRVERALPK 244 (342)
T ss_dssp HHHHHCTTCBCCCCC--------GGGSCSCHHHHHHHHTCTTCCCSCCBHHHHHHHHHHH-----------HHHHHHGGG
T ss_pred HHHHhccccccCccc--------ccccccchHHHHHHhcCcccccccccHHHHHHHHHHH-----------HHHHHHHHh
Confidence 111111110000000 0000012222222222211 112222222222111 112356788
Q ss_pred cCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchh---hHHHHHHHHHhhcc
Q 012210 393 CNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVE---QVYPCIVQFLGRYD 465 (468)
Q Consensus 393 I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe---~v~~~I~~FL~~~~ 465 (468)
|++|+|+|+|++|.++|++.++.+.+.+++...+++++ ++++|+.+.+ .++ ++...+.+||+++.
T Consensus 245 i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~--~~~gH~~~~~------~~~~~~~~~~~~~~~l~~~~ 312 (342)
T 3hju_A 245 LTVPFLLLQGSADRLCDSKGAYLLMELAKSQDKTLKIY--EGAYHVLHKE------LPEVTNSVFHEINMWVSQRT 312 (342)
T ss_dssp CCSCEEEEEETTCSSSCHHHHHHHHHHCCCSSEEEEEE--TTCCSCGGGS------CHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCEEEEEeCCCcccChHHHHHHHHHcCCCCceEEEE--CCCCchhhcC------ChHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999999999999655688888 8999999987 544 56677889988763
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-19 Score=172.37 Aligned_cols=219 Identities=16% Similarity=0.163 Sum_probs=143.9
Q ss_pred ccccccccccc--ccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHH
Q 012210 156 SLLERRQSSAI--AIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAME 233 (468)
Q Consensus 156 ~ll~~~~~~G~--~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~ 233 (468)
.++-.|.+.|- ...+..+++.|+ .+||+|+++|+.|++..-. . ..++++.++. +|+.++++
T Consensus 29 ~vvl~HG~~~~~~~~~~~~~~~~l~---~~g~~vi~~D~~G~G~S~~----------~---~~~~~~~~~~-~d~~~~~~ 91 (251)
T 2wtm_A 29 LCIIIHGFTGHSEERHIVAVQETLN---EIGVATLRADMYGHGKSDG----------K---FEDHTLFKWL-TNILAVVD 91 (251)
T ss_dssp EEEEECCTTCCTTSHHHHHHHHHHH---HTTCEEEEECCTTSTTSSS----------C---GGGCCHHHHH-HHHHHHHH
T ss_pred EEEEEcCCCcccccccHHHHHHHHH---HCCCEEEEecCCCCCCCCC----------c---cccCCHHHHH-HHHHHHHH
Confidence 34554555555 555777888888 8999999999999975311 0 1134667776 99999999
Q ss_pred HHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcch
Q 012210 234 YIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPL 313 (468)
Q Consensus 234 ~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (468)
++......+ +++++||||||.+++.+|.++ |++|+++|+++|....... ..... ...
T Consensus 92 ~l~~~~~~~--~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~~~~~---~~~~~-~~~------------ 148 (251)
T 2wtm_A 92 YAKKLDFVT--DIYMAGHSQGGLSVMLAAAME-----RDIIKALIPLSPAAMIPEI---ARTGE-LLG------------ 148 (251)
T ss_dssp HHTTCTTEE--EEEEEEETHHHHHHHHHHHHT-----TTTEEEEEEESCCTTHHHH---HHHTE-ETT------------
T ss_pred HHHcCcccc--eEEEEEECcchHHHHHHHHhC-----cccceEEEEECcHHHhHHH---Hhhhh-hcc------------
Confidence 997654333 899999999999999999987 8899999999876432110 00000 000
Q ss_pred HhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCcc
Q 012210 314 GALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKC 393 (468)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I 393 (468)
..+.....+..+. ..... .... . +..... ..+....+.+|
T Consensus 149 -----~~~~~~~~~~~~~----~~~~~--~~~~----------------~----~~~~~~---------~~~~~~~~~~i 188 (251)
T 2wtm_A 149 -----LKFDPENIPDELD----AWDGR--KLKG----------------N----YVRVAQ---------TIRVEDFVDKY 188 (251)
T ss_dssp -----EECBTTBCCSEEE----ETTTE--EEET----------------H----HHHHHT---------TCCHHHHHHHC
T ss_pred -----ccCCchhcchHHh----hhhcc--ccch----------------H----HHHHHH---------ccCHHHHHHhc
Confidence 0000000000000 00000 0000 0 000110 01122446778
Q ss_pred CccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 394 NIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 394 ~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
++|+|+|+|++|.++|++.++++.+.+++. +++++ ++++|+. .+ .|+++.+.|.+||+++.
T Consensus 189 ~~P~lii~G~~D~~v~~~~~~~~~~~~~~~--~~~~~--~~~gH~~-~~------~~~~~~~~i~~fl~~~~ 249 (251)
T 2wtm_A 189 TKPVLIVHGDQDEAVPYEASVAFSKQYKNC--KLVTI--PGDTHCY-DH------HLELVTEAVKEFMLEQI 249 (251)
T ss_dssp CSCEEEEEETTCSSSCHHHHHHHHHHSSSE--EEEEE--TTCCTTC-TT------THHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCcChHHHHHHHHhCCCc--EEEEE--CCCCccc-ch------hHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999865 88888 8999998 65 89999999999998764
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-18 Score=167.57 Aligned_cols=260 Identities=14% Similarity=0.174 Sum_probs=151.5
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|++.|-...++.++..|+ +||.|+++|+.|++..-. . ..++++++++ +|+.++++++.
T Consensus 35 vl~lHG~~~~~~~~~~~~~~l~----~~~~v~~~d~~G~G~s~~----------~---~~~~~~~~~~-~~~~~~~~~~~ 96 (299)
T 3g9x_A 35 VLFLHGNPTSSYLWRNIIPHVA----PSHRCIAPDLIGMGKSDK----------P---DLDYFFDDHV-RYLDAFIEALG 96 (299)
T ss_dssp EEEECCTTCCGGGGTTTHHHHT----TTSCEEEECCTTSTTSCC----------C---CCCCCHHHHH-HHHHHHHHHTT
T ss_pred EEEECCCCccHHHHHHHHHHHc----cCCEEEeeCCCCCCCCCC----------C---CCcccHHHHH-HHHHHHHHHhC
Confidence 4444444454555666666665 699999999999876311 0 1145777886 88888888763
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhH
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAL 316 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
. ++++++||||||.+++.+|.++ |++|+++|++++................ .......+.. ...
T Consensus 97 ~------~~~~lvG~S~Gg~~a~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~ 160 (299)
T 3g9x_A 97 L------EEVVLVIHDWGSALGFHWAKRN-----PERVKGIACMEFIRPFPTWDEWPEFARE---TFQAFRTADV--GRE 160 (299)
T ss_dssp C------CSEEEEEEHHHHHHHHHHHHHS-----GGGEEEEEEEEECCCBSSGGGSCGGGHH---HHHHHTSSSH--HHH
T ss_pred C------CcEEEEEeCccHHHHHHHHHhc-----chheeEEEEecCCcchhhhhhcchHHHH---HHHHHcCCCc--chh
Confidence 3 2899999999999999999998 8899999999965444321100000000 0000000000 000
Q ss_pred HHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCccccc-C-CccccccccCccC
Q 012210 317 LTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDR-G-GKFFYKDHIHKCN 394 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~l~~I~ 394 (468)
+ . .....+...++.... ......+....+...............+............ . ...++...+.+|+
T Consensus 161 ~---~--~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 233 (299)
T 3g9x_A 161 L---I--IDQNAFIEGALPKCV--VRPLTEVEMDHYREPFLKPVDREPLWRFPNELPIAGEPANIVALVEAYMNWLHQSP 233 (299)
T ss_dssp H---H--TTSCHHHHTHHHHTC--SSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCC
T ss_pred h---h--ccchhhHHHhhhhhh--ccCCCHHHHHHHHHHhccccccchhhhhhhhhhhccccchhhhhhhhhhhhcccCC
Confidence 0 0 000011111111110 1112333333333222211111222222221110000000 0 0001234568899
Q ss_pred ccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccCC
Q 012210 395 IPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDSV 467 (468)
Q Consensus 395 vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~~ 467 (468)
+|+|+|+|++|.++|++.++.+.+.+++. +++++ +++||+.+.+ .|+++.+.|.+|+.+....
T Consensus 234 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~--~~~~~--~~~gH~~~~e------~p~~~~~~i~~~~~~~~~~ 296 (299)
T 3g9x_A 234 VPKLLFWGTPGVLIPPAEAARLAESLPNC--KTVDI--GPGLHYLQED------NPDLIGSEIARWLPALHHH 296 (299)
T ss_dssp SCEEEEEEEECSSSCHHHHHHHHHHSTTE--EEEEE--EEESSCHHHH------CHHHHHHHHHHHSGGGCCC
T ss_pred CCeEEEecCCCCCCCHHHHHHHHhhCCCC--eEEEe--CCCCCcchhc------CHHHHHHHHHHHHhhhhhc
Confidence 99999999999999999999999999976 77877 8899999998 9999999999999887643
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... | Back alignment and structure |
|---|
Probab=99.80 E-value=1.6e-18 Score=165.49 Aligned_cols=242 Identities=17% Similarity=0.114 Sum_probs=138.0
Q ss_pred ccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcC
Q 012210 161 RQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSK 240 (468)
Q Consensus 161 ~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~ 240 (468)
|++.+-...++.++..|+ .+||+|+++|+.|++..-.. . ...+++++++ +|+.++++.+..
T Consensus 10 HG~~~~~~~w~~~~~~L~---~~g~~via~Dl~G~G~S~~~----------~--~~~~~~~~~a-~dl~~~l~~l~~--- 70 (257)
T 3c6x_A 10 HTICHGAWIWHKLKPLLE---ALGHKVTALDLAASGVDPRQ----------I--EEIGSFDEYS-EPLLTFLEALPP--- 70 (257)
T ss_dssp CCTTCCGGGGTTHHHHHH---HTTCEEEEECCTTSTTCSCC----------G--GGCCSHHHHT-HHHHHHHHTSCT---
T ss_pred cCCccCcCCHHHHHHHHH---hCCCEEEEeCCCCCCCCCCC----------c--ccccCHHHHH-HHHHHHHHhccc---
Confidence 333333344677888887 78999999999999763110 0 1135788887 898888877631
Q ss_pred CCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCC-chhh-HHhhcccCchhhhcCCCCcchHhHHH
Q 012210 241 PKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTS-SKST-LKLLLPLADPAQALNVPVVPLGALLT 318 (468)
Q Consensus 241 ~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (468)
. +++++|||||||.+++.+|.++ |++|+++|++++...... .... ...+...... ... .. .
T Consensus 71 ~--~~~~lvGhSmGG~va~~~a~~~-----p~~v~~lVl~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~-~----- 133 (257)
T 3c6x_A 71 G--EKVILVGESCGGLNIAIAADKY-----CEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPD--WKD--TT-Y----- 133 (257)
T ss_dssp T--CCEEEEEEETHHHHHHHHHHHH-----GGGEEEEEEEEECCCCSSSCTTHHHHHHHHHSCC--CTT--CE-E-----
T ss_pred c--CCeEEEEECcchHHHHHHHHhC-----chhhheEEEEecccCCCCCcchhHHHHHhhcCcc--hhh--hh-h-----
Confidence 1 3899999999999999999998 999999999987532111 1100 0000000000 000 00 0
Q ss_pred HhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcC-cccccC--CccccccccCccCc
Q 012210 319 AAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREG-GLRDRG--GKFFYKDHIHKCNI 395 (468)
Q Consensus 319 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~l~~I~v 395 (468)
..+...... .......++.+...+. ...+..... +....... ...... ....+ ......++
T Consensus 134 ~~~~~~~~~-----------~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 197 (257)
T 3c6x_A 134 FTYTKDGKE-----------ITGLKLGFTLLRENLY---TLCGPEEYE-LAKMLTRKGSLFQNILAKRPFF-TKEGYGSI 197 (257)
T ss_dssp EEEEETTEE-----------EEEEECCHHHHHHHTS---TTSCHHHHH-HHHHHCCCBCCCHHHHHHSCCC-CTTTGGGS
T ss_pred hhccCCCCc-----------cccccccHHHHHHHHh---cCCCHHHHH-HHHHhcCCCccchhhhcccccc-ChhhcCcc
Confidence 000000000 0000011111111100 001111000 00000000 000000 00000 00111378
Q ss_pred cEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 396 PILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 396 PvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
|+|+|+|++|.++|++.++.+.+.+|++ +++++ |++||+.|.| .|+++++.|.+|+++.
T Consensus 198 P~l~i~G~~D~~~p~~~~~~~~~~~~~~--~~~~i--~~~gH~~~~e------~P~~~~~~l~~f~~~~ 256 (257)
T 3c6x_A 198 KKIYVWTDQDEIFLPEFQLWQIENYKPD--KVYKV--EGGDHKLQLT------KTKEIAEILQEVADTY 256 (257)
T ss_dssp CEEEEECTTCSSSCHHHHHHHHHHSCCS--EEEEC--CSCCSCHHHH------SHHHHHHHHHHHHHHC
T ss_pred cEEEEEeCCCcccCHHHHHHHHHHCCCC--eEEEe--CCCCCCcccC------CHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999987 88888 9999999998 9999999999999864
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.80 E-value=3.6e-19 Score=170.08 Aligned_cols=247 Identities=16% Similarity=0.195 Sum_probs=141.3
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|++.+-...+..++..|+ .+||+|+++|+.|++..-. . ...+++++++ +|+.++++++.
T Consensus 22 vvllHG~~~~~~~~~~~~~~L~---~~g~~vi~~D~~G~G~S~~-----------~--~~~~~~~~~~-~dl~~~l~~l~ 84 (273)
T 1a8s_A 22 IVFSHGWPLNADSWESQMIFLA---AQGYRVIAHDRRGHGRSSQ-----------P--WSGNDMDTYA-DDLAQLIEHLD 84 (273)
T ss_dssp EEEECCTTCCGGGGHHHHHHHH---HTTCEEEEECCTTSTTSCC-----------C--SSCCSHHHHH-HHHHHHHHHTT
T ss_pred EEEECCCCCcHHHHhhHHhhHh---hCCcEEEEECCCCCCCCCC-----------C--CCCCCHHHHH-HHHHHHHHHhC
Confidence 3443444444455666777777 8999999999999976311 0 1135778886 99999988874
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhH
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAL 316 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
. ++++++||||||.+++.+++++. |++|+++|++++..+....... .+ ...+......+
T Consensus 85 ~------~~~~lvGhS~Gg~ia~~~a~~~~----p~~v~~lvl~~~~~~~~~~~~~--------~~---~~~~~~~~~~~ 143 (273)
T 1a8s_A 85 L------RDAVLFGFSTGGGEVARYIGRHG----TARVAKAGLISAVPPLMLKTEA--------NP---GGLPMEVFDGI 143 (273)
T ss_dssp C------CSEEEEEETHHHHHHHHHHHHHC----STTEEEEEEESCCCSCCBCCSS--------CT---TSBCHHHHHHH
T ss_pred C------CCeEEEEeChHHHHHHHHHHhcC----chheeEEEEEcccCcccccCcc--------cc---ccCcHHHHHHH
Confidence 3 28999999999999999877641 6789999999874322110000 00 00000000000
Q ss_pred HHHhcCCCCCchhHHHHHH-Hhhhc---cccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCc
Q 012210 317 LTAAYPLSSSPPYVFSWLN-NLISA---EDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHK 392 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 392 (468)
...... ....+...+.. .+... ......+....+......... .........+.. .+....+.+
T Consensus 144 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---------~~~~~~l~~ 211 (273)
T 1a8s_A 144 RQASLA--DRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGH-KNAYDCIKAFSE---------TDFTEDLKK 211 (273)
T ss_dssp HHHHHH--HHHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCH-HHHHHHHHHHHH---------CCCHHHHHT
T ss_pred HHHhHh--hHHHHHHHhhcccccCcCCcccccCHHHHHHHHHhccccch-hHHHHHHHHHhc---------cChhhhhhc
Confidence 000000 00000000000 00000 000112222221111111111 111111111111 123346788
Q ss_pred cCccEEEEecCCCCcCCHH-HHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 393 CNIPILAIAGDQDLICPPE-AVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 393 I~vPvLiI~G~~D~ivp~~-~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
|++|+|+|+|++|.++|++ ..+.+.+.+++. +++++ ++++|+.|.+ .|+++.+.|.+||++
T Consensus 212 i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~--~~~~~--~~~gH~~~~e------~p~~~~~~i~~fl~~ 273 (273)
T 1a8s_A 212 IDVPTLVVHGDADQVVPIEASGIASAALVKGS--TLKIY--SGAPHGLTDT------HKDQLNADLLAFIKG 273 (273)
T ss_dssp CCSCEEEEEETTCSSSCSTTTHHHHHHHSTTC--EEEEE--TTCCSCHHHH------THHHHHHHHHHHHHC
T ss_pred CCCCEEEEECCCCccCChHHHHHHHHHhCCCc--EEEEe--CCCCCcchhh------CHHHHHHHHHHHHhC
Confidence 9999999999999999988 566777888876 88888 9999999987 899999999999963
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.80 E-value=3.8e-19 Score=167.46 Aligned_cols=248 Identities=13% Similarity=0.106 Sum_probs=146.7
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|++.|-...+..+++.|+ .+||+|+++|+.|++..-... ...+++.+++ +|+.++++.+.
T Consensus 7 vv~lHG~~~~~~~~~~~~~~l~---~~g~~vi~~D~~G~G~S~~~~------------~~~~~~~~~~-~~l~~~l~~l~ 70 (258)
T 3dqz_A 7 FVLVHNAYHGAWIWYKLKPLLE---SAGHRVTAVELAASGIDPRPI------------QAVETVDEYS-KPLIETLKSLP 70 (258)
T ss_dssp EEEECCTTCCGGGGTTHHHHHH---HTTCEEEEECCTTSTTCSSCG------------GGCCSHHHHH-HHHHHHHHTSC
T ss_pred EEEECCCCCccccHHHHHHHHH---hCCCEEEEecCCCCcCCCCCC------------CccccHHHhH-HHHHHHHHHhc
Confidence 4444566666677788888888 889999999999997632110 0124677776 88888877763
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchh--hHHhhcccCchhhhcCCCCcchH
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKS--TLKLLLPLADPAQALNVPVVPLG 314 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 314 (468)
. .++++++||||||.+++.+|.++ |++|+++|++++......... ....+... ....... .....
T Consensus 71 ~-----~~~~~lvGhS~Gg~~a~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~ 137 (258)
T 3dqz_A 71 E-----NEEVILVGFSFGGINIALAADIF-----PAKIKVLVFLNAFLPDTTHVPSHVLDKYMEM--PGGLGDC-EFSSH 137 (258)
T ss_dssp T-----TCCEEEEEETTHHHHHHHHHTTC-----GGGEEEEEEESCCCCCSSSCTTHHHHHHHTS--TTCCTTC-EEEEE
T ss_pred c-----cCceEEEEeChhHHHHHHHHHhC-----hHhhcEEEEecCCCCCCCCcchHHHHHhccc--chhhhhc-ccchh
Confidence 2 13999999999999999999987 899999999998654332211 11111000 0000000 00000
Q ss_pred hHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcc-cccCCccccccccCcc
Q 012210 315 ALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGL-RDRGGKFFYKDHIHKC 393 (468)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~I 393 (468)
..... ...........+...+. ...+......+......... ................
T Consensus 138 -------~~~~~-----------~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (258)
T 3dqz_A 138 -------ETRNG-----------TMSLLKMGPKFMKARLY---QNCPIEDYELAKMLHRQGSFFTEDLSKKEKFSEEGYG 196 (258)
T ss_dssp -------EETTE-----------EEEEEECCHHHHHHHTS---TTSCHHHHHHHHHHCCCEECCHHHHHTSCCCCTTTGG
T ss_pred -------hhhcc-----------ChhhhhhhHHHHHHHhh---ccCCHHHHHHHHHhccCCchhhhhhhccccccccccc
Confidence 00000 00000011111111111 11111111111111111000 0000000011222334
Q ss_pred CccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 394 NIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 394 ~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
++|+|+|+|++|.++|++..+.+.+.+++. +++++ ++++|+.+.+ .|+++.+.|.+|++++
T Consensus 197 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~--~~~~~--~~~gH~~~~~------~p~~~~~~i~~fl~~~ 257 (258)
T 3dqz_A 197 SVQRVYVMSSEDKAIPCDFIRWMIDNFNVS--KVYEI--DGGDHMVMLS------KPQKLFDSLSAIATDY 257 (258)
T ss_dssp GSCEEEEEETTCSSSCHHHHHHHHHHSCCS--CEEEE--TTCCSCHHHH------SHHHHHHHHHHHHHHT
T ss_pred cCCEEEEECCCCeeeCHHHHHHHHHhCCcc--cEEEc--CCCCCchhhc------ChHHHHHHHHHHHHHh
Confidence 799999999999999999999999999987 78888 8999999998 9999999999999876
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=3.5e-18 Score=165.97 Aligned_cols=259 Identities=14% Similarity=0.127 Sum_probs=141.2
Q ss_pred ccccccccccccchhh-HHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRD-LSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYI 235 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~-~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l 235 (468)
++-.|++.+-...++. ++..|+ .+||+|+++|+.|++..-.... ...+|++++++ +|+.++++++
T Consensus 26 vvllHG~~~~~~~w~~~~~~~L~---~~G~~vi~~D~rG~G~S~~~~~----------~~~~~~~~~~a-~dl~~~l~~l 91 (298)
T 1q0r_A 26 LLLVMGGNLSALGWPDEFARRLA---DGGLHVIRYDHRDTGRSTTRDF----------AAHPYGFGELA-ADAVAVLDGW 91 (298)
T ss_dssp EEEECCTTCCGGGSCHHHHHHHH---TTTCEEEEECCTTSTTSCCCCT----------TTSCCCHHHHH-HHHHHHHHHT
T ss_pred EEEEcCCCCCccchHHHHHHHHH---hCCCEEEeeCCCCCCCCCCCCC----------CcCCcCHHHHH-HHHHHHHHHh
Confidence 3333443333334443 557777 8899999999999976311000 01245788887 9999999887
Q ss_pred HhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCc-chH
Q 012210 236 RAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVV-PLG 314 (468)
Q Consensus 236 ~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 314 (468)
.. ++++++||||||.+++.+|.++ |++|+++|++++............................. ...
T Consensus 92 ~~------~~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (298)
T 1q0r_A 92 GV------DRAHVVGLSMGATITQVIALDH-----HDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFLD 160 (298)
T ss_dssp TC------SSEEEEEETHHHHHHHHHHHHC-----GGGEEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSCCCCHHHHH
T ss_pred CC------CceEEEEeCcHHHHHHHHHHhC-----chhhheeEEecccCCCcccccchhhhhhhhhhhcccccccHHHHH
Confidence 43 2899999999999999999998 99999999998754110000000000000000000000000 000
Q ss_pred hHHHHhcCCCCCchhHHHHHHH--hhhccc-cCCHHHHHHHHhhccCCCcHHHHHHHHHHHhc-Cc-ccc--cCCccccc
Q 012210 315 ALLTAAYPLSSSPPYVFSWLNN--LISAED-MMHPELLKKLVLNNFCTIPAKLILQLTTAFRE-GG-LRD--RGGKFFYK 387 (468)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~l~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~--~~~~~~~~ 387 (468)
.+.....+.......+..+... ...... ..+.+....+... .+...... +. +.. .....+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (298)
T 1q0r_A 161 ALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEER-----------AIDHAGGVLAEPYAHYSLTLPPPSR 229 (298)
T ss_dssp HHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHH-----------HHHHTTTCCSCCCGGGGCCCCCGGG
T ss_pred HHhccCcccccHHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHH-----------HhhccCCccchhhhhhhhhcCcccc
Confidence 0111000000000001110000 000000 0111111111100 00000000 00 010 00112344
Q ss_pred cc-cCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 388 DH-IHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 388 ~~-l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
.. +.+|++|+|+|+|++|.++|++.++.+.+.+|++ +++++ |++|| + .|+++++.|.+||.++.
T Consensus 230 ~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~--~~~~i--~~~gH----e------~p~~~~~~i~~fl~~~~ 294 (298)
T 1q0r_A 230 AAELREVTVPTLVIQAEHDPIAPAPHGKHLAGLIPTA--RLAEI--PGMGH----A------LPSSVHGPLAEVILAHT 294 (298)
T ss_dssp GGGGGGCCSCEEEEEETTCSSSCTTHHHHHHHTSTTE--EEEEE--TTCCS----S------CCGGGHHHHHHHHHHHH
T ss_pred cccccccCCCEEEEEeCCCccCCHHHHHHHHHhCCCC--EEEEc--CCCCC----C------CcHHHHHHHHHHHHHHh
Confidence 56 8899999999999999999999999999999986 88888 88888 4 67899999999998764
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-18 Score=162.98 Aligned_cols=227 Identities=13% Similarity=0.105 Sum_probs=152.3
Q ss_pred ccccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHH
Q 012210 155 SSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEY 234 (468)
Q Consensus 155 ~~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~ 234 (468)
+.++-.|.+.|-...+..+++.|+ .+||.|+++|+.|++.... .... ..++++++. +|+.+++++
T Consensus 23 ~~vv~~HG~~~~~~~~~~~~~~l~---~~G~~v~~~d~~g~g~s~~---~~~~--------~~~~~~~~~-~d~~~~i~~ 87 (251)
T 3dkr_A 23 TGVVLLHAYTGSPNDMNFMARALQ---RSGYGVYVPLFSGHGTVEP---LDIL--------TKGNPDIWW-AESSAAVAH 87 (251)
T ss_dssp EEEEEECCTTCCGGGGHHHHHHHH---HTTCEEEECCCTTCSSSCT---HHHH--------HHCCHHHHH-HHHHHHHHH
T ss_pred ceEEEeCCCCCCHHHHHHHHHHHH---HCCCEEEecCCCCCCCCCh---hhhc--------CcccHHHHH-HHHHHHHHH
Confidence 344555666666777788888888 8999999999999866311 1110 012566776 999999999
Q ss_pred HHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchH
Q 012210 235 IRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLG 314 (468)
Q Consensus 235 l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (468)
+... . ++++++||||||.+++.+|.++ |+.++++++++|............ .
T Consensus 88 l~~~--~--~~~~l~G~S~Gg~~a~~~a~~~-----p~~~~~~i~~~p~~~~~~~~~~~~--~----------------- 139 (251)
T 3dkr_A 88 MTAK--Y--AKVFVFGLSLGGIFAMKALETL-----PGITAGGVFSSPILPGKHHLVPGF--L----------------- 139 (251)
T ss_dssp HHTT--C--SEEEEEESHHHHHHHHHHHHHC-----SSCCEEEESSCCCCTTCBCHHHHH--H-----------------
T ss_pred HHHh--c--CCeEEEEechHHHHHHHHHHhC-----ccceeeEEEecchhhccchhhHHH--H-----------------
Confidence 9887 2 4999999999999999999997 788999998887665432210000 0
Q ss_pred hHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccC
Q 012210 315 ALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCN 394 (468)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~ 394 (468)
.+. ..+........ ....+.... ...+..+..... .....+.+++
T Consensus 140 ~~~--------------~~~~~~~~~~~--~~~~~~~~~--------~~~~~~~~~~~~-----------~~~~~~~~~~ 184 (251)
T 3dkr_A 140 KYA--------------EYMNRLAGKSD--ESTQILAYL--------PGQLAAIDQFAT-----------TVAADLNLVK 184 (251)
T ss_dssp HHH--------------HHHHHHHTCCC--CHHHHHHHH--------HHHHHHHHHHHH-----------HHHHTGGGCC
T ss_pred HHH--------------HHHHhhcccCc--chhhHHhhh--------HHHHHHHHHHHH-----------HHhccccccC
Confidence 000 00000000000 011111110 011111111110 1234577889
Q ss_pred ccEEEEecCCCCcCCHHHHHHHHHhCCC-CceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccC
Q 012210 395 IPILAIAGDQDLICPPEAVEETVKLLPE-DLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 466 (468)
Q Consensus 395 vPvLiI~G~~D~ivp~~~~~~l~~~ip~-~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~ 466 (468)
+|+|+++|++|.++|++.++.+.+.+++ ..++++++ ++++|..+.+ ..++++.+.|.+||++...
T Consensus 185 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~gH~~~~~-----~~~~~~~~~i~~fl~~~~~ 250 (251)
T 3dkr_A 185 QPTFIGQAGQDELVDGRLAYQLRDALINAARVDFHWY--DDAKHVITVN-----SAHHALEEDVIAFMQQENE 250 (251)
T ss_dssp SCEEEEEETTCSSBCTTHHHHHHHHCTTCSCEEEEEE--TTCCSCTTTS-----TTHHHHHHHHHHHHHTTCC
T ss_pred CCEEEEecCCCcccChHHHHHHHHHhcCCCCceEEEe--CCCCcccccc-----cchhHHHHHHHHHHHhhcC
Confidence 9999999999999999999999999998 66788888 9999999987 2489999999999998753
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.80 E-value=1.2e-18 Score=166.62 Aligned_cols=249 Identities=17% Similarity=0.227 Sum_probs=142.4
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|++.+-...+..++..|+ .+||+|+++|+.|++..-.. ...+++++++ +|+.++++++.
T Consensus 22 vvllHG~~~~~~~w~~~~~~l~---~~g~~vi~~D~~G~G~S~~~-------------~~~~~~~~~~-~dl~~~l~~l~ 84 (274)
T 1a8q_A 22 VVFIHGWPLNGDAWQDQLKAVV---DAGYRGIAHDRRGHGHSTPV-------------WDGYDFDTFA-DDLNDLLTDLD 84 (274)
T ss_dssp EEEECCTTCCGGGGHHHHHHHH---HTTCEEEEECCTTSTTSCCC-------------SSCCSHHHHH-HHHHHHHHHTT
T ss_pred EEEECCCcchHHHHHHHHHHHH---hCCCeEEEEcCCCCCCCCCC-------------CCCCcHHHHH-HHHHHHHHHcC
Confidence 3443444444455566777777 88999999999999763110 1135788887 99999998874
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhH
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAL 316 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
. ++++++||||||.+++.+|+++. |++|+++|++++......... ..+ ...+......+
T Consensus 85 ~------~~~~lvGhS~Gg~ia~~~a~~~~----p~~v~~lvl~~~~~~~~~~~~--------~~~---~~~~~~~~~~~ 143 (274)
T 1a8q_A 85 L------RDVTLVAHSMGGGELARYVGRHG----TGRLRSAVLLSAIPPVMIKSD--------KNP---DGVPDEVFDAL 143 (274)
T ss_dssp C------CSEEEEEETTHHHHHHHHHHHHC----STTEEEEEEESCCCSCCBCCS--------SCT---TSBCHHHHHHH
T ss_pred C------CceEEEEeCccHHHHHHHHHHhh----hHheeeeeEecCCCccccccc--------cCc---ccchHHHHHHH
Confidence 3 28999999999999999887641 678999999987432211000 000 00000000000
Q ss_pred HHHhcCCCCCchhHHHHHHHhhhcc---ccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCcc
Q 012210 317 LTAAYPLSSSPPYVFSWLNNLISAE---DMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKC 393 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I 393 (468)
...... ....+...+...+.... .....+....+........ ..........+.. .+....+.+|
T Consensus 144 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---------~~~~~~l~~i 211 (274)
T 1a8q_A 144 KNGVLT--ERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQT-IEGGVRCVDAFGY---------TDFTEDLKKF 211 (274)
T ss_dssp HHHHHH--HHHHHHHHHHHHHTTTTSTTCCCCHHHHHHHHHHHTTSC-HHHHHHHHHHHHH---------CCCHHHHTTC
T ss_pred HHHhhc--cHHHHHHHhcccccccccccccccHHHHHHHHHHhhhcC-hHHHHHHHhhhhc---------CcHHHHhhcC
Confidence 000000 00000001111111100 0112222222221111111 1111111111111 1233567889
Q ss_pred CccEEEEecCCCCcCCHH-HHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 394 NIPILAIAGDQDLICPPE-AVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 394 ~vPvLiI~G~~D~ivp~~-~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
++|+|+|+|++|.++|++ ..+.+.+.+++. +++++ ++++|+.+.+ ++.|+++.+.|.+||++
T Consensus 212 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~--~~~~~--~~~gH~~~~e----~~~p~~~~~~i~~fl~~ 274 (274)
T 1a8q_A 212 DIPTLVVHGDDDQVVPIDATGRKSAQIIPNA--ELKVY--EGSSHGIAMV----PGDKEKFNRDLLEFLNK 274 (274)
T ss_dssp CSCEEEEEETTCSSSCGGGTHHHHHHHSTTC--EEEEE--TTCCTTTTTS----TTHHHHHHHHHHHHHTC
T ss_pred CCCEEEEecCcCCCCCcHHHHHHHHhhCCCc--eEEEE--CCCCCceecc----cCCHHHHHHHHHHHhcC
Confidence 999999999999999988 456677888876 88888 9999999974 12689999999999963
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=3.2e-19 Score=171.09 Aligned_cols=248 Identities=15% Similarity=0.151 Sum_probs=142.9
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|++.+-...++.++..|+ ++|+|+++|+.|++..-... ... ...+++++++ +|+.++++.+.
T Consensus 23 vvllHG~~~~~~~w~~~~~~L~----~~~~vi~~Dl~G~G~S~~~~---~~~------~~~~~~~~~a-~dl~~~l~~l~ 88 (271)
T 1wom_A 23 IMFAPGFGCDQSVWNAVAPAFE----EDHRVILFDYVGSGHSDLRA---YDL------NRYQTLDGYA-QDVLDVCEALD 88 (271)
T ss_dssp EEEECCTTCCGGGGTTTGGGGT----TTSEEEECCCSCCSSSCCTT---CCT------TGGGSHHHHH-HHHHHHHHHTT
T ss_pred EEEEcCCCCchhhHHHHHHHHH----hcCeEEEECCCCCCCCCCCc---ccc------cccccHHHHH-HHHHHHHHHcC
Confidence 3443444444444555555554 58999999999997631100 000 0113677786 88888888764
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhH
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAL 316 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
. ++++++||||||.+++.+|.++ |++|+++|++++......... .....+. . .....+
T Consensus 89 ~------~~~~lvGhS~GG~va~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~--~~~~~~~-~--------~~~~~~ 146 (271)
T 1wom_A 89 L------KETVFVGHSVGALIGMLASIRR-----PELFSHLVMVGPSPCYLNDPP--EYYGGFE-E--------EQLLGL 146 (271)
T ss_dssp C------SCEEEEEETHHHHHHHHHHHHC-----GGGEEEEEEESCCSCCBEETT--TEECSBC-H--------HHHHHH
T ss_pred C------CCeEEEEeCHHHHHHHHHHHhC-----HHhhcceEEEcCCCcCCCCCc--hhccCCC-H--------HHHHHH
Confidence 3 2899999999999999999998 899999999987532111100 0000000 0 000000
Q ss_pred HHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCcc
Q 012210 317 LTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIP 396 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP 396 (468)
+..+... ...+...+....... ...++..+.+.... ..........+...... .+....+.+|++|
T Consensus 147 ~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---------~~~~~~l~~i~~P 212 (271)
T 1wom_A 147 LEMMEKN--YIGWATVFAATVLNQ--PDRPEIKEELESRF-CSTDPVIARQFAKAAFF---------SDHREDLSKVTVP 212 (271)
T ss_dssp HHHHHHC--HHHHHHHHHHHHHCC--TTCHHHHHHHHHHH-HHSCHHHHHHHHHHHHS---------CCCHHHHTTCCSC
T ss_pred HHHHhhh--HHHHHHHHHHHHhcC--CCchHHHHHHHHHH-hcCCcHHHHHHHHHHhC---------cchHHhccccCCC
Confidence 0000000 000000000000000 01122222211111 11111111111111111 1234567889999
Q ss_pred EEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 397 ILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 397 vLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
+|+|+|++|.++|++.++.+.+.+++. +++++ +++||+.|.+ .|+++.+.|.+||+++
T Consensus 213 ~lvi~G~~D~~~~~~~~~~~~~~~~~~--~~~~i--~~~gH~~~~e------~p~~~~~~i~~fl~~~ 270 (271)
T 1wom_A 213 SLILQCADDIIAPATVGKYMHQHLPYS--SLKQM--EARGHCPHMS------HPDETIQLIGDYLKAH 270 (271)
T ss_dssp EEEEEEETCSSSCHHHHHHHHHHSSSE--EEEEE--EEESSCHHHH------CHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCcCCHHHHHHHHHHCCCC--EEEEe--CCCCcCcccc------CHHHHHHHHHHHHHhc
Confidence 999999999999999999999999976 88888 8899999998 8999999999999875
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.80 E-value=1.5e-18 Score=166.03 Aligned_cols=246 Identities=18% Similarity=0.230 Sum_probs=140.5
Q ss_pred cccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHh
Q 012210 158 LERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRA 237 (468)
Q Consensus 158 l~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~ 237 (468)
+-.|++.+-...+..++..|+ .+||+|+++|+.|++..-.. ..++++++++ +|+.++++++..
T Consensus 25 vllHG~~~~~~~w~~~~~~l~---~~g~~vi~~D~~G~G~S~~~-------------~~~~~~~~~~-~dl~~~l~~l~~ 87 (275)
T 1a88_A 25 VFHHGWPLSADDWDNQMLFFL---SHGYRVIAHDRRGHGRSDQP-------------STGHDMDTYA-ADVAALTEALDL 87 (275)
T ss_dssp EEECCTTCCGGGGHHHHHHHH---HTTCEEEEECCTTSTTSCCC-------------SSCCSHHHHH-HHHHHHHHHHTC
T ss_pred EEECCCCCchhhHHHHHHHHH---HCCceEEEEcCCcCCCCCCC-------------CCCCCHHHHH-HHHHHHHHHcCC
Confidence 333444333445566677777 88999999999999763110 1245788887 999999998753
Q ss_pred hcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHH
Q 012210 238 QSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALL 317 (468)
Q Consensus 238 ~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (468)
. +++++||||||.+++.+++++. |++|+++|++++..+....... .+ ...+......+.
T Consensus 88 ~------~~~lvGhS~Gg~ia~~~a~~~~----p~~v~~lvl~~~~~~~~~~~~~--------~~---~~~~~~~~~~~~ 146 (275)
T 1a88_A 88 R------GAVHIGHSTGGGEVARYVARAE----PGRVAKAVLVSAVPPVMVKSDT--------NP---DGLPLEVFDEFR 146 (275)
T ss_dssp C------SEEEEEETHHHHHHHHHHHHSC----TTSEEEEEEESCCCSCCBCBTT--------BT---TSBCHHHHHHHH
T ss_pred C------ceEEEEeccchHHHHHHHHHhC----chheEEEEEecCCCcccccCcc--------Cc---ccCCHHHHHHHH
Confidence 2 8999999999999999887641 6789999999874332110000 00 000000000000
Q ss_pred HHhcCCCCCchhHHHHHH-Hhhhc---cccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCcc
Q 012210 318 TAAYPLSSSPPYVFSWLN-NLISA---EDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKC 393 (468)
Q Consensus 318 ~~~~~~~~~~~~~~~~l~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I 393 (468)
..... ....+...+.. .+... ......+....+......... .........+.. .+....+.+|
T Consensus 147 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---------~~~~~~l~~i 214 (275)
T 1a88_A 147 AALAA--NRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAA-NAHYECIAAFSE---------TDFTDDLKRI 214 (275)
T ss_dssp HHHHH--CHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCH-HHHHHHHHHHHH---------CCCHHHHHHC
T ss_pred HHHhh--hHHHHHHhhhccccccccCcccccCHHHHHHHHHHhhhcch-HhHHHHHhhhhh---------cccccccccC
Confidence 00000 00000000000 00000 000112222221111110111 111111111111 1233467789
Q ss_pred CccEEEEecCCCCcCCHH-HHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 394 NIPILAIAGDQDLICPPE-AVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 394 ~vPvLiI~G~~D~ivp~~-~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
++|+|+|+|++|.++|++ ..+.+.+.+++. +++++ ++++|+.|.+ .|+++.+.|.+||++
T Consensus 215 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~--~~~~~--~~~gH~~~~e------~p~~~~~~i~~fl~~ 275 (275)
T 1a88_A 215 DVPVLVAHGTDDQVVPYADAAPKSAELLANA--TLKSY--EGLPHGMLST------HPEVLNPDLLAFVKS 275 (275)
T ss_dssp CSCEEEEEETTCSSSCSTTTHHHHHHHSTTE--EEEEE--TTCCTTHHHH------CHHHHHHHHHHHHHC
T ss_pred CCCEEEEecCCCccCCcHHHHHHHHhhCCCc--EEEEc--CCCCccHHHh------CHHHHHHHHHHHhhC
Confidence 999999999999999988 456677888865 88888 9999999987 899999999999963
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1.4e-18 Score=166.93 Aligned_cols=241 Identities=12% Similarity=0.128 Sum_probs=148.1
Q ss_pred ccccccccccccchh-hHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIR-DLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYI 235 (468)
Q Consensus 157 ll~~~~~~G~~~~i~-~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l 235 (468)
++-.+++.|-...+. .+...++ ..||.|+++|+.|++.... ..++++++++ +|+.++++++
T Consensus 46 vv~lHG~~~~~~~~~~~~~~~l~---~~g~~vi~~D~~G~G~s~~--------------~~~~~~~~~~-~~~~~~l~~l 107 (293)
T 3hss_A 46 VVFIAGRGGAGRTWHPHQVPAFL---AAGYRCITFDNRGIGATEN--------------AEGFTTQTMV-ADTAALIETL 107 (293)
T ss_dssp EEEECCTTCCGGGGTTTTHHHHH---HTTEEEEEECCTTSGGGTT--------------CCSCCHHHHH-HHHHHHHHHH
T ss_pred EEEECCCCCchhhcchhhhhhHh---hcCCeEEEEccCCCCCCCC--------------cccCCHHHHH-HHHHHHHHhc
Confidence 455455545445555 5666676 8999999999999854210 0135777886 8999888887
Q ss_pred HhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHh
Q 012210 236 RAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGA 315 (468)
Q Consensus 236 ~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (468)
.. ++++++||||||.+++.+|.++ |++|+++|+++++.............. ..
T Consensus 108 ~~------~~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~----------------~~ 160 (293)
T 3hss_A 108 DI------APARVVGVSMGAFIAQELMVVA-----PELVSSAVLMATRGRLDRARQFFNKAE----------------AE 160 (293)
T ss_dssp TC------CSEEEEEETHHHHHHHHHHHHC-----GGGEEEEEEESCCSSCCHHHHHHHHHH----------------HH
T ss_pred CC------CcEEEEeeCccHHHHHHHHHHC-----hHHHHhhheecccccCChhhhHHHHHH----------------HH
Confidence 43 2999999999999999999997 889999999998765432211111000 00
Q ss_pred HHHHhcCCCCCchhHHHHHHH--hhhccccCCHHHHHHH---HhhccCCCcHHHHHHHHHHHhcCcccccCCcccccccc
Q 012210 316 LLTAAYPLSSSPPYVFSWLNN--LISAEDMMHPELLKKL---VLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHI 390 (468)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 390 (468)
+... .............. .+.............. ............. ..+. .....+....+
T Consensus 161 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~------~~~~~~~~~~l 227 (293)
T 3hss_A 161 LYDS---GVQLPPTYDARARLLENFSRKTLNDDVAVGDWIAMFSMWPIKSTPGLR----CQLD------CAPQTNRLPAY 227 (293)
T ss_dssp HHHH---TCCCCHHHHHHHHHHHHSCHHHHTCHHHHHHHHHHHHHSCCCCCHHHH----HHHT------SSCSSCCHHHH
T ss_pred HHhh---cccchhhHHHHHHHhhhcccccccccccHHHHHHHHhhccccccHHHH----hHhh------hccccchHHHH
Confidence 0000 00000000000000 0000000011111111 1111111111111 1110 01122334567
Q ss_pred CccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 391 HKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 391 ~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
.+|++|+|+|+|++|.++|++.++.+.+.+++. +++++ ++++|+.+.+ .|+++.+.|.+||++..
T Consensus 228 ~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~--~~~~~--~~~gH~~~~~------~p~~~~~~i~~fl~~~~ 292 (293)
T 3hss_A 228 RNIAAPVLVIGFADDVVTPPYLGREVADALPNG--RYLQI--PDAGHLGFFE------RPEAVNTAMLKFFASVK 292 (293)
T ss_dssp TTCCSCEEEEEETTCSSSCHHHHHHHHHHSTTE--EEEEE--TTCCTTHHHH------SHHHHHHHHHHHHHTCC
T ss_pred hhCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCc--eEEEe--CCCcchHhhh------CHHHHHHHHHHHHHhcC
Confidence 889999999999999999999999999999976 88888 9999999987 89999999999998764
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=4.1e-19 Score=174.90 Aligned_cols=250 Identities=10% Similarity=0.115 Sum_probs=145.3
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.+++.+-...++.+...|+ .+|+|+++|+.|++..-. ...+|++++++ +|+.++++.+.
T Consensus 32 vvllHG~~~~~~~w~~~~~~L~----~~~~via~Dl~G~G~S~~-------------~~~~~~~~~~a-~dl~~ll~~l~ 93 (316)
T 3afi_E 32 VLFLHGNPTSSHIWRNILPLVS----PVAHCIAPDLIGFGQSGK-------------PDIAYRFFDHV-RYLDAFIEQRG 93 (316)
T ss_dssp EEEECCTTCCGGGGTTTHHHHT----TTSEEEEECCTTSTTSCC-------------CSSCCCHHHHH-HHHHHHHHHTT
T ss_pred EEEECCCCCchHHHHHHHHHHh----hCCEEEEECCCCCCCCCC-------------CCCCCCHHHHH-HHHHHHHHHcC
Confidence 3443444444455666666666 569999999999976311 01246788887 99999998874
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCc---h-----------hhHHhhcccCch
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSS---K-----------STLKLLLPLADP 302 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~---~-----------~~~~~~~~~~~~ 302 (468)
. +++++|||||||.+++.+|.++ |++|+++|++++....... . .......
T Consensus 94 ~------~~~~lvGhS~Gg~va~~~A~~~-----P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 157 (316)
T 3afi_E 94 V------TSAYLVAQDWGTALAFHLAARR-----PDFVRGLAFMEFIRPMPTWQDFHHTEVAEEQDHAEAARAVF----- 157 (316)
T ss_dssp C------CSEEEEEEEHHHHHHHHHHHHC-----TTTEEEEEEEEECCCBSSGGGTTCCCCGGGHHHHHHHHHHH-----
T ss_pred C------CCEEEEEeCccHHHHHHHHHHC-----HHhhhheeeeccCCCcchhhhccchhhccccccchhHHHHH-----
Confidence 3 2999999999999999999998 9999999999873321100 0 0000000
Q ss_pred hhhcCCCCcchHhHHHHhcCCCCCchhHHHHHHHhhh--ccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCccccc
Q 012210 303 AQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLIS--AEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDR 380 (468)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (468)
.....+.. ...+ ... .. .+...... .......+.+..+............. ...+........
T Consensus 158 -~~~~~~~~--~~~~---~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 222 (316)
T 3afi_E 158 -RKFRTPGE--GEAM---ILE--AN----AFVERVLPGGIVRKLGDEEMAPYRTPFPTPESRRPV---LAFPRELPIAGE 222 (316)
T ss_dssp -HHHTSTTH--HHHH---HTT--SC----HHHHTTTGGGCSSCCCHHHHHHHHTTCCSTGGGHHH---HHTGGGSCBTTB
T ss_pred -HHhcCCch--hhHH---Hhc--cc----hHHHHhcccccCCCCCHHHHHHHHhhcCCccchhHH---HHHHHhcccccc
Confidence 00000000 0000 000 00 00000000 00111222222222111000000011 111100000000
Q ss_pred -----CCccccccccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHH
Q 012210 381 -----GGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYP 455 (468)
Q Consensus 381 -----~~~~~~~~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~ 455 (468)
....++...+.+|+||+|+|+|++|.++|++.++.+.+.+|++ +++++ +++||+.|.| +|++|.+
T Consensus 223 ~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~~--~~~~i--~~~GH~~~~e------~p~~~~~ 292 (316)
T 3afi_E 223 PADVYEALQSAHAALAASSYPKLLFTGEPGALVSPEFAERFAASLTRC--ALIRL--GAGLHYLQED------HADAIGR 292 (316)
T ss_dssp SHHHHHHHHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHSSSE--EEEEE--EEECSCHHHH------HHHHHHH
T ss_pred chhhhhHHHHHHHhhhccCCCeEEEecCCCCccCHHHHHHHHHhCCCC--eEEEc--CCCCCCchhh------CHHHHHH
Confidence 0000122346679999999999999999999999999999986 88888 8999999998 9999999
Q ss_pred HHHHHHhhcc
Q 012210 456 CIVQFLGRYD 465 (468)
Q Consensus 456 ~I~~FL~~~~ 465 (468)
.|.+||++..
T Consensus 293 ~i~~fl~~~~ 302 (316)
T 3afi_E 293 SVAGWIAGIE 302 (316)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHhhcC
Confidence 9999998764
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.7e-18 Score=164.17 Aligned_cols=248 Identities=18% Similarity=0.226 Sum_probs=142.3
Q ss_pred cccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHH
Q 012210 156 SLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYI 235 (468)
Q Consensus 156 ~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l 235 (468)
.++-.|.+.|-...++.+++.|+ .+||.|+++|+.|++..-... ...++++.+++ +|+.++++++
T Consensus 28 ~vv~~hG~~~~~~~~~~~~~~l~---~~G~~v~~~d~~G~G~s~~~~-----------~~~~~~~~~~~-~~~~~~~~~~ 92 (286)
T 3qit_A 28 VVLCIHGILEQGLAWQEVALPLA---AQGYRVVAPDLFGHGRSSHLE-----------MVTSYSSLTFL-AQIDRVIQEL 92 (286)
T ss_dssp EEEEECCTTCCGGGGHHHHHHHH---HTTCEEEEECCTTSTTSCCCS-----------SGGGCSHHHHH-HHHHHHHHHS
T ss_pred EEEEECCCCcccchHHHHHHHhh---hcCeEEEEECCCCCCCCCCCC-----------CCCCcCHHHHH-HHHHHHHHhc
Confidence 35555566666677778888888 899999999999987632111 01234566765 7777777765
Q ss_pred HhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCch--hhHHhhcccCchhhhcCCCCcch
Q 012210 236 RAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSK--STLKLLLPLADPAQALNVPVVPL 313 (468)
Q Consensus 236 ~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 313 (468)
. . ++++++||||||.+++.+|.++ |++|+++|+++++....... .....+
T Consensus 93 ~----~--~~~~l~G~S~Gg~~a~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~~----------------- 144 (286)
T 3qit_A 93 P----D--QPLLLVGHSMGAMLATAIASVR-----PKKIKELILVELPLPAEESKKESAVNQL----------------- 144 (286)
T ss_dssp C----S--SCEEEEEETHHHHHHHHHHHHC-----GGGEEEEEEESCCCCCCC---CCHHHHH-----------------
T ss_pred C----C--CCEEEEEeCHHHHHHHHHHHhC-----hhhccEEEEecCCCCCccccchhhhHHH-----------------
Confidence 3 2 3999999999999999999997 88999999999877654332 000000
Q ss_pred HhHHHHhcCCCC--CchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHH------HHHHHHHHHhcCcccccCCccc
Q 012210 314 GALLTAAYPLSS--SPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAK------LILQLTTAFREGGLRDRGGKFF 385 (468)
Q Consensus 314 ~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 385 (468)
...+........ .....................+....+........... .............+ .....+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 222 (286)
T 3qit_A 145 TTCLDYLSSTPQHPIFPDVATAASRLRQAIPSLSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILGLNNL--PGGRSQ 222 (286)
T ss_dssp HHHHHHHTCCCCCCCBSSHHHHHHHHHHHSTTSCHHHHHHHHHHTEEEETTEEEECSCGGGGGHHHHTTTSC--TTHHHH
T ss_pred HHHHHHHhccccccccccHHHHHHHhhcCCcccCHHHHHHHhhccccccccceeeeechhhhcccccccccc--ccchhH
Confidence 000000000000 00000000000000011112222222211110000000 00000000000000 001112
Q ss_pred cccccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHH
Q 012210 386 YKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQ 459 (468)
Q Consensus 386 ~~~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~ 459 (468)
+...+.+|++|+|+|+|++|.++|++..+.+.+.+++. +++++ ++ +|+.+.+ .|+++.+.|.+
T Consensus 223 ~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~--~~~~~--~g-gH~~~~e------~p~~~~~~i~~ 285 (286)
T 3qit_A 223 YLEMLKSIQVPTTLVYGDSSKLNRPEDLQQQKMTMTQA--KRVFL--SG-GHNLHID------AAAALASLILT 285 (286)
T ss_dssp HHHHHHHCCSCEEEEEETTCCSSCHHHHHHHHHHSTTS--EEEEE--SS-SSCHHHH------THHHHHHHHHC
T ss_pred HHHHHhccCCCeEEEEeCCCcccCHHHHHHHHHHCCCC--eEEEe--eC-CchHhhh------ChHHHHHHhhc
Confidence 23456789999999999999999999999999999987 78888 88 9999998 88998887753
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=3.4e-18 Score=163.65 Aligned_cols=246 Identities=14% Similarity=0.136 Sum_probs=138.4
Q ss_pred cccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHh
Q 012210 158 LERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRA 237 (468)
Q Consensus 158 l~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~ 237 (468)
+-.|++.+-...++.++..|+ .+||+|+++|+.|++..-.. . ...+++++++ +|+.++++.+..
T Consensus 14 vllHG~~~~~~~w~~~~~~L~---~~g~~via~Dl~G~G~S~~~--~----------~~~~~~~~~a-~dl~~~l~~l~~ 77 (264)
T 2wfl_A 14 VLVHGGCLGAWIWYKLKPLLE---SAGHKVTAVDLSAAGINPRR--L----------DEIHTFRDYS-EPLMEVMASIPP 77 (264)
T ss_dssp EEECCTTCCGGGGTTHHHHHH---HTTCEEEEECCTTSTTCSCC--G----------GGCCSHHHHH-HHHHHHHHHSCT
T ss_pred EEECCCccccchHHHHHHHHH---hCCCEEEEeecCCCCCCCCC--c----------ccccCHHHHH-HHHHHHHHHhCC
Confidence 333444444445677888887 78999999999999763110 0 0135788887 899888887731
Q ss_pred hcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCc-h-hhHHhhcccCchhhhcCCCCcchHh
Q 012210 238 QSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSS-K-STLKLLLPLADPAQALNVPVVPLGA 315 (468)
Q Consensus 238 ~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (468)
. ++++||||||||++++.+|.++ |++|+++|++++....... . .....+............ .
T Consensus 78 ---~--~~~~lvGhSmGG~va~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---- 141 (264)
T 2wfl_A 78 ---D--EKVVLLGHSFGGMSLGLAMETY-----PEKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPADMMLDS--Q---- 141 (264)
T ss_dssp ---T--CCEEEEEETTHHHHHHHHHHHC-----GGGEEEEEEESSCCCCTTSCTTHHHHHHHHHSCTTTTTTC--E----
T ss_pred ---C--CCeEEEEeChHHHHHHHHHHhC-----hhhhceeEEEeeccCCCCcchhhHHHHhhhcCcchhhhhh--h----
Confidence 1 3899999999999999999998 9999999999874322111 0 000000000000000000 0
Q ss_pred HHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCccc---ccCCccccccccCc
Q 012210 316 LLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLR---DRGGKFFYKDHIHK 392 (468)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~ 392 (468)
. ..+....... ......++.+..... ...+.... .+.......... .......+ .....
T Consensus 142 -~-~~~~~~~~~~-----------~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 203 (264)
T 2wfl_A 142 -F-STYGNPENPG-----------MSMILGPQFMALKMF---QNCSVEDL-ELAKMLTRPGSLFFQDLAKAKKF-STERY 203 (264)
T ss_dssp -E-EEESCTTSCE-----------EEEECCHHHHHHHTS---TTSCHHHH-HHHHHHCCCEECCHHHHTTSCCC-CTTTG
T ss_pred -h-hhccCCCCCc-----------chhhhhHHHHHHHHh---cCCCHHHH-HHHHhccCCCccccccccccccc-ChHHh
Confidence 0 0000000000 000001111111000 00011000 011110000000 00000001 00112
Q ss_pred cCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 393 CNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 393 I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
.++|+|+|+|++|.++|++..+.+.+.+|++ +++++ +++||+.|.| +|+++.+.|.+|+++
T Consensus 204 ~~~P~l~i~G~~D~~~~~~~~~~~~~~~p~~--~~~~i--~~~gH~~~~e------~P~~~~~~l~~f~~~ 264 (264)
T 2wfl_A 204 GSVKRAYIFCNEDKSFPVEFQKWFVESVGAD--KVKEI--KEADHMGMLS------QPREVCKCLLDISDS 264 (264)
T ss_dssp GGSCEEEEEETTCSSSCHHHHHHHHHHHCCS--EEEEE--TTCCSCHHHH------SHHHHHHHHHHHHC-
T ss_pred CCCCeEEEEeCCcCCCCHHHHHHHHHhCCCc--eEEEe--CCCCCchhhc------CHHHHHHHHHHHhhC
Confidence 4799999999999999999999999999987 88888 9999999998 999999999999863
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=5.1e-18 Score=163.48 Aligned_cols=245 Identities=14% Similarity=0.127 Sum_probs=138.3
Q ss_pred ccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcC
Q 012210 161 RQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSK 240 (468)
Q Consensus 161 ~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~ 240 (468)
+++.+-...++.++..|+ .+||+|+++|+.|++..-.. . ...+++++++ +|+.++++.+..
T Consensus 11 HG~~~~~~~w~~~~~~L~---~~g~rVia~Dl~G~G~S~~~--~----------~~~~~~~~~a-~dl~~~l~~l~~--- 71 (273)
T 1xkl_A 11 HGACHGGWSWYKLKPLLE---AAGHKVTALDLAASGTDLRK--I----------EELRTLYDYT-LPLMELMESLSA--- 71 (273)
T ss_dssp CCTTCCGGGGTTHHHHHH---HTTCEEEECCCTTSTTCCCC--G----------GGCCSHHHHH-HHHHHHHHTSCS---
T ss_pred CCCCCCcchHHHHHHHHH---hCCCEEEEecCCCCCCCccC--c----------ccccCHHHHH-HHHHHHHHHhcc---
Confidence 444443445677888887 78999999999999763110 0 1135777886 888888876631
Q ss_pred CCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCch--hhHHhhcccCchhhhcCCCCcchHhHHH
Q 012210 241 PKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSK--STLKLLLPLADPAQALNVPVVPLGALLT 318 (468)
Q Consensus 241 ~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (468)
. ++++||||||||++++.+|.++ |++|+++|++++........ .....+............ . .
T Consensus 72 ~--~~~~lvGhSmGG~va~~~a~~~-----P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~------~ 136 (273)
T 1xkl_A 72 D--EKVILVGHSLGGMNLGLAMEKY-----PQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDT--Q------F 136 (273)
T ss_dssp S--SCEEEEEETTHHHHHHHHHHHC-----GGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTC--E------E
T ss_pred C--CCEEEEecCHHHHHHHHHHHhC-----hHhheEEEEEeccCCCCCCcHHHHHHHhhccCChhhHHHH--H------H
Confidence 1 3899999999999999999998 99999999998753221111 001111000000000000 0 0
Q ss_pred HhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCc-ccccC--CccccccccCccCc
Q 012210 319 AAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGG-LRDRG--GKFFYKDHIHKCNI 395 (468)
Q Consensus 319 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~l~~I~v 395 (468)
..+....... ......+..+...+. ...+.... .+........ ..... ....+ .....+++
T Consensus 137 ~~~~~~~~~~-----------~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 200 (273)
T 1xkl_A 137 LPYGSPEEPL-----------TSMFFGPKFLAHKLY---QLCSPEDL-ALASSLVRPSSLFMEDLSKAKYF-TDERFGSV 200 (273)
T ss_dssp EECSCTTSCC-----------EEEECCHHHHHHHTS---TTSCHHHH-HHHHHHCCCBCCCHHHHHHCCCC-CTTTGGGS
T ss_pred hhccCCCCCc-----------cccccCHHHHHHHhh---ccCCHHHH-HHHHHhcCCCchhhhhhhccccc-chhhhCCC
Confidence 0000000000 000001111111000 00010000 0000000000 00000 00000 00112479
Q ss_pred cEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 396 PILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 396 PvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
|+|+|+|++|.++|++.++.+.+.+|++ +++++ |++||+.|.| .|+++.+.|.+|+++..
T Consensus 201 P~l~i~G~~D~~~p~~~~~~~~~~~p~~--~~~~i--~~aGH~~~~e------~P~~~~~~i~~fl~~~~ 260 (273)
T 1xkl_A 201 KRVYIVCTEDKGIPEEFQRWQIDNIGVT--EAIEI--KGADHMAMLC------EPQKLCASLLEIAHKYN 260 (273)
T ss_dssp CEEEEEETTCTTTTHHHHHHHHHHHCCS--EEEEE--TTCCSCHHHH------SHHHHHHHHHHHHHHCC
T ss_pred CeEEEEeCCccCCCHHHHHHHHHhCCCC--eEEEe--CCCCCCchhc------CHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999987 88888 9999999998 99999999999998764
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=99.78 E-value=4.6e-18 Score=163.79 Aligned_cols=246 Identities=14% Similarity=0.133 Sum_probs=133.7
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|.+.+-...++.++..|+ +||+|+++|+.|++..-... ...+|++++++ +|+.++++.+.
T Consensus 32 vvllHG~~~~~~~~~~~~~~L~----~~~~vi~~Dl~G~G~S~~~~-----------~~~~~~~~~~a-~dl~~~l~~l~ 95 (285)
T 3bwx_A 32 VLCLPGLTRNARDFEDLATRLA----GDWRVLCPEMRGRGDSDYAK-----------DPMTYQPMQYL-QDLEALLAQEG 95 (285)
T ss_dssp EEEECCTTCCGGGGHHHHHHHB----BTBCEEEECCTTBTTSCCCS-----------SGGGCSHHHHH-HHHHHHHHHHT
T ss_pred EEEECCCCcchhhHHHHHHHhh----cCCEEEeecCCCCCCCCCCC-----------CccccCHHHHH-HHHHHHHHhcC
Confidence 3443444444445566666665 59999999999997631100 01245777886 99999998874
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCc-chHh
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVV-PLGA 315 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 315 (468)
. ++++++||||||.+++.+|.++ |++|+++|++++...... .....+..... ..... ....
T Consensus 96 ~------~~~~lvGhS~Gg~va~~~a~~~-----p~~v~~lvl~~~~~~~~~--~~~~~~~~~~~-----~~~~~~~~~~ 157 (285)
T 3bwx_A 96 I------ERFVAIGTSLGGLLTMLLAAAN-----PARIAAAVLNDVGPEVSP--EGLERIRGYVG-----QGRNFETWMH 157 (285)
T ss_dssp C------CSEEEEEETHHHHHHHHHHHHC-----GGGEEEEEEESCCSSCCH--HHHHHHHHHTT-----CCCEESSHHH
T ss_pred C------CceEEEEeCHHHHHHHHHHHhC-----chheeEEEEecCCcccCc--chhHHHHHHhc-----CCcccccHHH
Confidence 3 2899999999999999999998 999999999865322111 00110000000 00000 0000
Q ss_pred HHHHhcCCCCCchhHHHHHHHhhhcc-ccCCHHHHHHHHhhccCCCcHH-HHHHHHHHHhcCccccc---CCcccccccc
Q 012210 316 LLTAAYPLSSSPPYVFSWLNNLISAE-DMMHPELLKKLVLNNFCTIPAK-LILQLTTAFREGGLRDR---GGKFFYKDHI 390 (468)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~l 390 (468)
. ...+....... ...................+.. ....+...+. ..+... ....+....+
T Consensus 158 ~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 222 (285)
T 3bwx_A 158 A--------------ARALQESSGDVYPDWDITQWLRYAKRIMVLGSSGRIAFDYDMKIA-EPFEAPVGATPQVDMWPLF 222 (285)
T ss_dssp H--------------HHHHHHHHTTTSTTCCHHHHHHHHHHHEEECTTSCEEESBCGGGG-CCTTSCTTCCCSSCCHHHH
T ss_pred H--------------HHHHHHhhhhcccccChHHHHHHHHhhheeCCCCceeeccCHHHH-HHHhhhhhccccchhhHHH
Confidence 0 00000000000 0001111110000000000000 0000000000 000000 0001112233
Q ss_pred Ccc-CccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 391 HKC-NIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 391 ~~I-~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
.++ ++|+|+|+|++|.++|++.++++.+. ++. +++++ +++||+.|.+ .|+.+ ..|.+||++
T Consensus 223 ~~~~~~P~lii~G~~D~~~~~~~~~~~~~~-~~~--~~~~i--~~~gH~~~~e------~p~~~-~~i~~fl~~ 284 (285)
T 3bwx_A 223 DALATRPLLVLRGETSDILSAQTAAKMASR-PGV--ELVTL--PRIGHAPTLD------EPESI-AAIGRLLER 284 (285)
T ss_dssp HHHTTSCEEEEEETTCSSSCHHHHHHHHTS-TTE--EEEEE--TTCCSCCCSC------SHHHH-HHHHHHHTT
T ss_pred HHccCCCeEEEEeCCCCccCHHHHHHHHhC-CCc--EEEEe--CCCCccchhh------CchHH-HHHHHHHHh
Confidence 455 89999999999999999999999988 765 88888 9999999997 78876 689999974
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A | Back alignment and structure |
|---|
Probab=99.78 E-value=9.9e-19 Score=168.22 Aligned_cols=267 Identities=14% Similarity=0.109 Sum_probs=142.0
Q ss_pred cccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHH
Q 012210 156 SLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYI 235 (468)
Q Consensus 156 ~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l 235 (468)
.++-.|.+.|-...++.++..|+ . ||.|+++|+.|++..-..... . ...++++++++ +|+.++++.+
T Consensus 35 ~vv~lHG~~~~~~~~~~~~~~l~---~-~~~v~~~D~~G~G~S~~~~~~------~--~~~~~~~~~~~-~~~~~~l~~l 101 (306)
T 3r40_A 35 PLLLLHGFPQTHVMWHRVAPKLA---E-RFKVIVADLPGYGWSDMPESD------E--QHTPYTKRAMA-KQLIEAMEQL 101 (306)
T ss_dssp EEEEECCTTCCGGGGGGTHHHHH---T-TSEEEEECCTTSTTSCCCCCC------T--TCGGGSHHHHH-HHHHHHHHHT
T ss_pred eEEEECCCCCCHHHHHHHHHHhc---c-CCeEEEeCCCCCCCCCCCCCC------c--ccCCCCHHHHH-HHHHHHHHHh
Confidence 34554555555666777777777 5 999999999999763211100 0 00134677776 8888888776
Q ss_pred HhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHh
Q 012210 236 RAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGA 315 (468)
Q Consensus 236 ~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (468)
.. ++++++||||||.+++.+|.++ |++|+++|++++............................ ...
T Consensus 102 ~~------~~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~- 168 (306)
T 3r40_A 102 GH------VHFALAGHNRGARVSYRLALDS-----PGRLSKLAVLDILPTYEYWQRMNRAYALKIYHWSFLAQPA-PLP- 168 (306)
T ss_dssp TC------SSEEEEEETHHHHHHHHHHHHC-----GGGEEEEEEESCCCHHHHHHHCSHHHHHHSTHHHHHTSCT-THH-
T ss_pred CC------CCEEEEEecchHHHHHHHHHhC-----hhhccEEEEecCCCCccchhhhhhhhhhhhHHHHHhhccc-chH-
Confidence 33 2899999999999999999997 8899999999974332111000000000000000000000 000
Q ss_pred HHHHhcCCCCCchhHHHHHHHhhhc--cccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCcc
Q 012210 316 LLTAAYPLSSSPPYVFSWLNNLISA--EDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKC 393 (468)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I 393 (468)
..+.. .....++..++...... .....++.+..+...............+.......... ........+.+|
T Consensus 169 --~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~i 242 (306)
T 3r40_A 169 --ENLLG-GDPDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAFADPMRRHVMCEDYRAGAYADFE---HDKIDVEAGNKI 242 (306)
T ss_dssp --HHHHT-SCHHHHHHHHHHHTSSSSSSTTSCHHHHHHHHHHHTSHHHHHHHHHHHHHHHTHHHH---HHHHHHHHTCCB
T ss_pred --HHHHc-CCHHHHHHHHhhcccCCCccccCCHHHHHHHHHHHccCCCcchhhHHHHhcccccch---hhhhhhhhccCC
Confidence 00000 00011122222222111 22234444443332211101111111111111100000 000001146889
Q ss_pred CccEEEEecCCCCcCC-HHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 394 NIPILAIAGDQDLICP-PEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 394 ~vPvLiI~G~~D~ivp-~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
++|+|+|+|++|.++| ....+.+.+.+++. +++++ +++|+.|.+ .|+++.+.|.+||+++.
T Consensus 243 ~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~--~~~~~---~~gH~~~~e------~p~~~~~~i~~fl~~~~ 304 (306)
T 3r40_A 243 PVPMLALWGASGIAQSAATPLDVWRKWASDV--QGAPI---ESGHFLPEE------APDQTAEALVRFFSAAP 304 (306)
T ss_dssp CSCEEEEEETTCC------CHHHHHHHBSSE--EEEEE---SSCSCHHHH------SHHHHHHHHHHHHHC--
T ss_pred CcceEEEEecCCcccCchhHHHHHHhhcCCC--eEEEe---cCCcCchhh------ChHHHHHHHHHHHHhcc
Confidence 9999999999999999 55677777778865 77777 579999998 99999999999999864
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.78 E-value=3.4e-19 Score=175.75 Aligned_cols=243 Identities=13% Similarity=0.111 Sum_probs=139.1
Q ss_pred ccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCC
Q 012210 163 SSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPK 242 (468)
Q Consensus 163 ~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~ 242 (468)
.||.......+...+. .-||+|+++|+.|++..-. . ...++++++++ +|+.++++++..
T Consensus 87 ~hG~~~~~~~~~~~~~---~lg~~Vi~~D~~G~G~S~~----------~--~~~~~~~~~~a-~dl~~~l~~l~~----- 145 (330)
T 3p2m_A 87 LHGGGQNAHTWDTVIV---GLGEPALAVDLPGHGHSAW----------R--EDGNYSPQLNS-ETLAPVLRELAP----- 145 (330)
T ss_dssp ECCTTCCGGGGHHHHH---HSCCCEEEECCTTSTTSCC----------C--SSCBCCHHHHH-HHHHHHHHHSST-----
T ss_pred ECCCCCccchHHHHHH---HcCCeEEEEcCCCCCCCCC----------C--CCCCCCHHHHH-HHHHHHHHHhCC-----
Confidence 3455544555555555 3399999999999865311 0 01245677776 888888887643
Q ss_pred CCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcC
Q 012210 243 DGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYP 322 (468)
Q Consensus 243 ~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (468)
++++++||||||.+++.+|.++ |++|+++|++++........ ..+...... ....+..
T Consensus 146 -~~v~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~~~~~~---~~~~~~~~~----------~~~~~~~--- 203 (330)
T 3p2m_A 146 -GAEFVVGMSLGGLTAIRLAAMA-----PDLVGELVLVDVTPSALQRH---AELTAEQRG----------TVALMHG--- 203 (330)
T ss_dssp -TCCEEEEETHHHHHHHHHHHHC-----TTTCSEEEEESCCHHHHHHH---HHHTCC-----------------------
T ss_pred -CCcEEEEECHhHHHHHHHHHhC-----hhhcceEEEEcCCCccchhh---hhhhhhhhh----------hhhhhcC---
Confidence 2899999999999999999997 88999999998754321110 000000000 0000000
Q ss_pred CCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEec
Q 012210 323 LSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAG 402 (468)
Q Consensus 323 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G 402 (468)
..........+..............+...+...........+ ......+.......++...+.+|++|+|+|+|
T Consensus 204 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G 277 (330)
T 3p2m_A 204 -EREFPSFQAMLDLTIAAAPHRDVKSLRRGVFHNSRRLDNGNW-----VWRYDAIRTFGDFAGLWDDVDALSAPITLVRG 277 (330)
T ss_dssp --CCBSCHHHHHHHHHHHCTTSCHHHHHHHHHTTEEECSSSCE-----EESSCCCSBCCCHHHHHHHHHHCCSCEEEEEE
T ss_pred -CccccCHHHHHHHHHhcCCCCCHHHHHHHHHhcccccCCCce-----EEeechhhCccccHHHHHHHhhCCCCEEEEEe
Confidence 000000111111111111111122222111111000000000 00000000000111122357789999999999
Q ss_pred CCCCcCCHHHHHHHHHhCCCCcee-EEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 403 DQDLICPPEAVEETVKLLPEDLVT-YKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 403 ~~D~ivp~~~~~~l~~~ip~~~~~-~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
++|.++|++.++.+.+.+++. + ++++ ++++|+.+.+ .|+++.+.|.+||+++
T Consensus 278 ~~D~~v~~~~~~~l~~~~~~~--~~~~~i--~~~gH~~~~e------~p~~~~~~i~~fl~~~ 330 (330)
T 3p2m_A 278 GSSGFVTDQDTAELHRRATHF--RGVHIV--EKSGHSVQSD------QPRALIEIVRGVLDTR 330 (330)
T ss_dssp TTCCSSCHHHHHHHHHHCSSE--EEEEEE--TTCCSCHHHH------CHHHHHHHHHHHTTC-
T ss_pred CCCCCCCHHHHHHHHHhCCCC--eeEEEe--CCCCCCcchh------CHHHHHHHHHHHHhcC
Confidence 999999999999999999986 6 8888 9999999997 9999999999999864
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=6.5e-19 Score=167.46 Aligned_cols=219 Identities=15% Similarity=0.225 Sum_probs=145.0
Q ss_pred cccccccccc--ccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHH
Q 012210 157 LLERRQSSAI--AIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEY 234 (468)
Q Consensus 157 ll~~~~~~G~--~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~ 234 (468)
++-.+++.|- ...+..+++.|+ .+||.|+++|+.|++..... ...+++.+++ +|+.+++++
T Consensus 49 vv~~HG~~~~~~~~~~~~~~~~l~---~~G~~v~~~d~~G~G~s~~~-------------~~~~~~~~~~-~d~~~~i~~ 111 (270)
T 3pfb_A 49 AIIFHGFTANRNTSLLREIANSLR---DENIASVRFDFNGHGDSDGK-------------FENMTVLNEI-EDANAILNY 111 (270)
T ss_dssp EEEECCTTCCTTCHHHHHHHHHHH---HTTCEEEEECCTTSTTSSSC-------------GGGCCHHHHH-HHHHHHHHH
T ss_pred EEEEcCCCCCccccHHHHHHHHHH---hCCcEEEEEccccccCCCCC-------------CCccCHHHHH-HhHHHHHHH
Confidence 4444444444 444778888888 89999999999998663210 1234667776 999999999
Q ss_pred HHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchH
Q 012210 235 IRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLG 314 (468)
Q Consensus 235 l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (468)
++.+.+.+ +++++||||||.+++.+|..+ |++|+++|+++|........ ..... .. .
T Consensus 112 l~~~~~~~--~i~l~G~S~Gg~~a~~~a~~~-----p~~v~~~v~~~~~~~~~~~~--~~~~~--~~----~-------- 168 (270)
T 3pfb_A 112 VKTDPHVR--NIYLVGHAQGGVVASMLAGLY-----PDLIKKVVLLAPAATLKGDA--LEGNT--QG----V-------- 168 (270)
T ss_dssp HHTCTTEE--EEEEEEETHHHHHHHHHHHHC-----TTTEEEEEEESCCTHHHHHH--HHTEE--TT----E--------
T ss_pred HHhCcCCC--eEEEEEeCchhHHHHHHHHhC-----chhhcEEEEeccccccchhh--hhhhh--hc----c--------
Confidence 98876654 999999999999999999987 88999999999875432210 00000 00 0
Q ss_pred hHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccC
Q 012210 315 ALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCN 394 (468)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~ 394 (468)
.+...... ....... ..... .+..... ..+....+.+++
T Consensus 169 -----~~~~~~~~--------~~~~~~~---------------~~~~~-~~~~~~~------------~~~~~~~~~~~~ 207 (270)
T 3pfb_A 169 -----TYNPDHIP--------DRLPFKD---------------LTLGG-FYLRIAQ------------QLPIYEVSAQFT 207 (270)
T ss_dssp -----ECCTTSCC--------SEEEETT---------------EEEEH-HHHHHHH------------HCCHHHHHTTCC
T ss_pred -----ccCccccc--------ccccccc---------------cccch-hHhhccc------------ccCHHHHHhhCC
Confidence 00000000 0000000 00000 0000000 011234567889
Q ss_pred ccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccC
Q 012210 395 IPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 466 (468)
Q Consensus 395 vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~ 466 (468)
+|+|+++|++|.++|++.++.+.+.+++. +++++ ++++|..+.+ .++++.+.|.+||+++..
T Consensus 208 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~--~~~~~--~~~gH~~~~~------~~~~~~~~i~~fl~~~~~ 269 (270)
T 3pfb_A 208 KPVCLIHGTDDTVVSPNASKKYDQIYQNS--TLHLI--EGADHCFSDS------YQKNAVNLTTDFLQNNNA 269 (270)
T ss_dssp SCEEEEEETTCSSSCTHHHHHHHHHCSSE--EEEEE--TTCCTTCCTH------HHHHHHHHHHHHHC----
T ss_pred ccEEEEEcCCCCCCCHHHHHHHHHhCCCC--eEEEc--CCCCcccCcc------chHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999875 88888 8999999876 899999999999998753
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=99.78 E-value=4.5e-18 Score=165.82 Aligned_cols=237 Identities=14% Similarity=0.178 Sum_probs=146.0
Q ss_pred cccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHH
Q 012210 156 SLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYI 235 (468)
Q Consensus 156 ~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l 235 (468)
.++-.+++.|-...++.+++.|+ .||.|+++|+.|++... .....+++++++ +|+.++++++
T Consensus 70 ~vv~lhG~~~~~~~~~~~~~~L~----~~~~v~~~D~~G~G~S~-------------~~~~~~~~~~~~-~dl~~~l~~l 131 (314)
T 3kxp_A 70 LMLFFHGITSNSAVFEPLMIRLS----DRFTTIAVDQRGHGLSD-------------KPETGYEANDYA-DDIAGLIRTL 131 (314)
T ss_dssp EEEEECCTTCCGGGGHHHHHTTT----TTSEEEEECCTTSTTSC-------------CCSSCCSHHHHH-HHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH----cCCeEEEEeCCCcCCCC-------------CCCCCCCHHHHH-HHHHHHHHHh
Confidence 34554555555556666666665 48999999999986631 011245677876 8888888887
Q ss_pred HhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHh
Q 012210 236 RAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGA 315 (468)
Q Consensus 236 ~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (468)
.. ++++++||||||.+++.+|.++ |++|+++|++++........ ...+......
T Consensus 132 ~~------~~v~lvG~S~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~~~~~~--~~~~~~~~~~------------- 185 (314)
T 3kxp_A 132 AR------GHAILVGHSLGARNSVTAAAKY-----PDLVRSVVAIDFTPYIETEA--LDALEARVNA------------- 185 (314)
T ss_dssp TS------SCEEEEEETHHHHHHHHHHHHC-----GGGEEEEEEESCCTTCCHHH--HHHHHHHTTT-------------
T ss_pred CC------CCcEEEEECchHHHHHHHHHhC-----hhheeEEEEeCCCCCCCcch--hhHHHHHhhh-------------
Confidence 54 2999999999999999999997 88999999998865432211 1110000000
Q ss_pred HHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccC--------CCcHHHHHHHHHHHhcCcccccCCccccc
Q 012210 316 LLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFC--------TIPAKLILQLTTAFREGGLRDRGGKFFYK 387 (468)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (468)
.............++.. ................... .........+..... .++.
T Consensus 186 ----~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~ 248 (314)
T 3kxp_A 186 ----GSQLFEDIKAVEAYLAG---RYPNIPADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLR----------SDLV 248 (314)
T ss_dssp ----TCSCBSSHHHHHHHHHH---HSTTSCHHHHHHHHHHSEEEETTEEEESSCHHHHHHHHHHTT----------SCCH
T ss_pred ----chhhhcCHHHHHHHHHh---hcccCchHHHHHHhhhhhcccccccccccChhhhhhhccccC----------cchh
Confidence 00000000000111111 0111122222222211110 011111111111110 0234
Q ss_pred cccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 388 DHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 388 ~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
..+.+|++|+|+|+|++|.++|++.++.+.+.+++. +++++ ++++|+.+.+ .++++.+.|.+||++
T Consensus 249 ~~~~~i~~P~Lii~G~~D~~~~~~~~~~~~~~~~~~--~~~~~--~g~gH~~~~e------~~~~~~~~i~~fl~~ 314 (314)
T 3kxp_A 249 PAYRDVTKPVLIVRGESSKLVSAAALAKTSRLRPDL--PVVVV--PGADHYVNEV------SPEITLKAITNFIDA 314 (314)
T ss_dssp HHHHHCCSCEEEEEETTCSSSCHHHHHHHHHHCTTS--CEEEE--TTCCSCHHHH------CHHHHHHHHHHHHHC
T ss_pred hHhhcCCCCEEEEecCCCccCCHHHHHHHHHhCCCc--eEEEc--CCCCCcchhh------CHHHHHHHHHHHHhC
Confidence 567789999999999999999999999999999986 78888 9999999987 899999999999974
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.9e-18 Score=164.00 Aligned_cols=238 Identities=16% Similarity=0.118 Sum_probs=135.9
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|++.+-...++.++..|+ .+|+|+++|+.|++..... .++++++++ +++ .
T Consensus 16 vvllHG~~~~~~~w~~~~~~L~----~~~~vi~~Dl~G~G~S~~~--------------~~~~~~~~~-~~l-------~ 69 (258)
T 1m33_A 16 LVLLHGWGLNAEVWRCIDEELS----SHFTLHLVDLPGFGRSRGF--------------GALSLADMA-EAV-------L 69 (258)
T ss_dssp EEEECCTTCCGGGGGGTHHHHH----TTSEEEEECCTTSTTCCSC--------------CCCCHHHHH-HHH-------H
T ss_pred EEEECCCCCChHHHHHHHHHhh----cCcEEEEeeCCCCCCCCCC--------------CCcCHHHHH-HHH-------H
Confidence 3443444444555666777665 6899999999999763110 133555544 333 3
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhH
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAL 316 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
...+ ++++++||||||.+++.+|.++ |++|+++|++++...+...... . .........+
T Consensus 70 ~~l~---~~~~lvGhS~Gg~va~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~-~------------~~~~~~~~~~ 128 (258)
T 1m33_A 70 QQAP---DKAIWLGWSLGGLVASQIALTH-----PERVRALVTVASSPCFSARDEW-P------------GIKPDVLAGF 128 (258)
T ss_dssp TTSC---SSEEEEEETHHHHHHHHHHHHC-----GGGEEEEEEESCCSCCBCBTTB-C------------SBCHHHHHHH
T ss_pred HHhC---CCeEEEEECHHHHHHHHHHHHh-----hHhhceEEEECCCCCccccccc-c------------CCCHHHHHHH
Confidence 3333 3899999999999999999998 9999999999875332211100 0 0000000000
Q ss_pred HHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHH---HhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCcc
Q 012210 317 LTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKL---VLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKC 393 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I 393 (468)
...+.. .....+..++..... ...........+ +.... ......+......+.. .+....+.+|
T Consensus 129 ~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---------~~~~~~l~~i 195 (258)
T 1m33_A 129 QQQLSD--DQQRTVERFLALQTM-GTETARQDARALKKTVLALP-MPEVDVLNGGLEILKT---------VDLRQPLQNV 195 (258)
T ss_dssp HHHHHH--HHHHHHHHHHHTTST-TSTTHHHHHHHHHHHHHTSC-CCCHHHHHHHHHHHHH---------CCCTTGGGGC
T ss_pred HHHHhc--cHHHHHHHHHHHHhc-CCccchhhHHHHHHHHHhcc-CCcHHHHHHHHHHHHh---------CCHHHHHhhC
Confidence 000000 000000011100000 000011111111 11111 1111122222222211 1234567889
Q ss_pred CccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 394 NIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 394 ~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
++|+|+|+|++|.++|++.++.+.+.+++. +++++ +++||+.|.+ .|+++.+.|.+||.+.
T Consensus 196 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~--~~~~i--~~~gH~~~~e------~p~~~~~~i~~fl~~~ 256 (258)
T 1m33_A 196 SMPFLRLYGYLDGLVPRKVVPMLDKLWPHS--ESYIF--AKAAHAPFIS------HPAEFCHLLVALKQRV 256 (258)
T ss_dssp CSCEEEEEETTCSSSCGGGCC-CTTTCTTC--EEEEE--TTCCSCHHHH------SHHHHHHHHHHHHTTS
T ss_pred CCCEEEEeecCCCCCCHHHHHHHHHhCccc--eEEEe--CCCCCCcccc------CHHHHHHHHHHHHHhc
Confidence 999999999999999999989999999987 88888 9999999998 8999999999999865
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=8.3e-18 Score=165.48 Aligned_cols=106 Identities=19% Similarity=0.263 Sum_probs=76.8
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.+++.+-...++.++..|+ .+||+|+++|+.|++..-..... ...+|++++++ +|+.++++.+.
T Consensus 34 vvllHG~~~~~~~w~~~~~~L~---~~g~~via~Dl~G~G~S~~~~~~---------~~~~~~~~~~a-~dl~~~l~~l~ 100 (328)
T 2cjp_A 34 ILFIHGFPELWYSWRHQMVYLA---ERGYRAVAPDLRGYGDTTGAPLN---------DPSKFSILHLV-GDVVALLEAIA 100 (328)
T ss_dssp EEEECCTTCCGGGGHHHHHHHH---TTTCEEEEECCTTSTTCBCCCTT---------CGGGGSHHHHH-HHHHHHHHHHC
T ss_pred EEEECCCCCchHHHHHHHHHHH---HCCcEEEEECCCCCCCCCCcCcC---------CcccccHHHHH-HHHHHHHHHhc
Confidence 3443444444444566666666 78999999999999763111000 01245788887 99999999885
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcccc
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSL 284 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~ 284 (468)
. .. ++++++||||||.+++.+|.++ |++|+++|+++++.
T Consensus 101 ~--~~--~~~~lvGhS~Gg~ia~~~A~~~-----p~~v~~lvl~~~~~ 139 (328)
T 2cjp_A 101 P--NE--EKVFVVAHDWGALIAWHLCLFR-----PDKVKALVNLSVHF 139 (328)
T ss_dssp T--TC--SSEEEEEETHHHHHHHHHHHHC-----GGGEEEEEEESCCC
T ss_pred C--CC--CCeEEEEECHHHHHHHHHHHhC-----hhheeEEEEEccCC
Confidence 1 02 3999999999999999999998 99999999998754
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=99.77 E-value=3.7e-18 Score=160.85 Aligned_cols=235 Identities=14% Similarity=0.152 Sum_probs=139.3
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|++.|-...+..+++.|+ +||.|+++|+.|++..-. . ..+++++++ +|+.++++++.
T Consensus 26 vv~lHG~~~~~~~~~~~~~~l~----~~~~vi~~d~~G~G~S~~----------~----~~~~~~~~~-~~~~~~~~~l~ 86 (262)
T 3r0v_A 26 VVLVGGALSTRAGGAPLAERLA----PHFTVICYDRRGRGDSGD----------T----PPYAVEREI-EDLAAIIDAAG 86 (262)
T ss_dssp EEEECCTTCCGGGGHHHHHHHT----TTSEEEEECCTTSTTCCC----------C----SSCCHHHHH-HHHHHHHHHTT
T ss_pred EEEECCCCcChHHHHHHHHHHh----cCcEEEEEecCCCcCCCC----------C----CCCCHHHHH-HHHHHHHHhcC
Confidence 3443444444455555555554 899999999999876311 1 145778886 88888888764
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhH
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAL 316 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
.+++++||||||.+++.+|.++ | +|+++|+++++.......... .. .....
T Consensus 87 -------~~~~l~G~S~Gg~ia~~~a~~~-----p-~v~~lvl~~~~~~~~~~~~~~---------------~~-~~~~~ 137 (262)
T 3r0v_A 87 -------GAAFVFGMSSGAGLSLLAAASG-----L-PITRLAVFEPPYAVDDSRPPV---------------PP-DYQTR 137 (262)
T ss_dssp -------SCEEEEEETHHHHHHHHHHHTT-----C-CEEEEEEECCCCCCSTTSCCC---------------CT-THHHH
T ss_pred -------CCeEEEEEcHHHHHHHHHHHhC-----C-CcceEEEEcCCcccccccchh---------------hh-HHHHH
Confidence 2999999999999999999997 7 999999999876543321000 00 00000
Q ss_pred HHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHH--HHHHHHHHhcCcccccCCccccccccCccC
Q 012210 317 LTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKL--ILQLTTAFREGGLRDRGGKFFYKDHIHKCN 394 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~ 394 (468)
+...............++.. .....++....+............ ...+...... ........+.+|+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~i~ 206 (262)
T 3r0v_A 138 LDALLAEGRRGDAVTYFMTE----GVGVPPDLVAQMQQAPMWPGMEAVAHTLPYDHAVMG-------DNTIPTARFASIS 206 (262)
T ss_dssp HHHHHHTTCHHHHHHHHHHH----TSCCCHHHHHHHHTSTTHHHHHHTGGGHHHHHHHHT-------TSCCCHHHHTTCC
T ss_pred HHHHhhccchhhHHHHHhhc----ccCCCHHHHHHHHhhhcccchHHHHhhhhhhhhhhh-------cCCCCHHHcCcCC
Confidence 11110000001111111111 111223333332211100000000 0000000000 0111235678899
Q ss_pred ccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 395 IPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 395 vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
+|+|+|+|++|.++|++.++++.+.+++. +++++ ++++| ++ .|+++.+.|.+||++
T Consensus 207 ~P~lii~G~~D~~~~~~~~~~~~~~~~~~--~~~~~--~~~gH---~~------~p~~~~~~i~~fl~~ 262 (262)
T 3r0v_A 207 IPTLVMDGGASPAWIRHTAQELADTIPNA--RYVTL--ENQTH---TV------APDAIAPVLVEFFTR 262 (262)
T ss_dssp SCEEEEECTTCCHHHHHHHHHHHHHSTTE--EEEEC--CCSSS---SC------CHHHHHHHHHHHHC-
T ss_pred CCEEEEeecCCCCCCHHHHHHHHHhCCCC--eEEEe--cCCCc---cc------CHHHHHHHHHHHHhC
Confidence 99999999999999999999999999976 88888 77888 34 789999999999964
|
| >4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A | Back alignment and structure |
|---|
Probab=99.77 E-value=4.2e-19 Score=168.46 Aligned_cols=245 Identities=14% Similarity=0.154 Sum_probs=147.7
Q ss_pred cccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHH
Q 012210 156 SLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYI 235 (468)
Q Consensus 156 ~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l 235 (468)
.++-.|++.|-...+..++..+. .+||.|+++|+.|++........ ...+++.+++ +|+.++++.+
T Consensus 26 ~vv~lHG~~~~~~~~~~~~~~l~---~~g~~v~~~d~~G~G~s~~~~~~----------~~~~~~~~~~-~~~~~~~~~~ 91 (279)
T 4g9e_A 26 PLLMIHGNSSSGAIFAPQLEGEI---GKKWRVIAPDLPGHGKSTDAIDP----------DRSYSMEGYA-DAMTEVMQQL 91 (279)
T ss_dssp EEEEECCTTCCGGGGHHHHHSHH---HHHEEEEEECCTTSTTSCCCSCH----------HHHSSHHHHH-HHHHHHHHHH
T ss_pred eEEEECCCCCchhHHHHHHhHHH---hcCCeEEeecCCCCCCCCCCCCc----------ccCCCHHHHH-HHHHHHHHHh
Confidence 34554555555555555665544 78999999999999764221101 1234677776 8888888876
Q ss_pred HhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHh
Q 012210 236 RAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGA 315 (468)
Q Consensus 236 ~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (468)
.. .+++++||||||.+++.+|.++ |+ +.++|+++++........ ..+......... ....
T Consensus 92 ~~------~~~~lvG~S~Gg~~a~~~a~~~-----p~-~~~~vl~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~----- 151 (279)
T 4g9e_A 92 GI------ADAVVFGWSLGGHIGIEMIARY-----PE-MRGLMITGTPPVAREEVG--QGFKSGPDMALA-GQEI----- 151 (279)
T ss_dssp TC------CCCEEEEETHHHHHHHHHTTTC-----TT-CCEEEEESCCCCCGGGHH--HHBCCSTTGGGG-GCSC-----
T ss_pred CC------CceEEEEECchHHHHHHHHhhC-----Cc-ceeEEEecCCCCCCCccc--hhhccchhhhhc-Cccc-----
Confidence 43 2899999999999999999986 55 999999987655433211 111110000000 0000
Q ss_pred HHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCc
Q 012210 316 LLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNI 395 (468)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~v 395 (468)
........+........ ........+. . ........+...+... ...+....+.++++
T Consensus 152 ---------~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~----~~~~~~~~~~~~~~~~------~~~~~~~~~~~i~~ 209 (279)
T 4g9e_A 152 ---------FSERDVESYARSTCGEP--FEASLLDIVA-R----TDGRARRIMFEKFGSG------TGGNQRDIVAEAQL 209 (279)
T ss_dssp ---------CCHHHHHHHHHHHHCSS--CCHHHHHHHH-H----SCHHHHHHHHHHHHHT------CBCCHHHHHHHCCS
T ss_pred ---------ccHHHHHHHHHhhccCc--ccHHHHHHHH-h----hhccchHHHHHHhhcc------CCchHHHHHHhcCC
Confidence 00111112222221111 1222221111 1 1111222222222111 11233456788999
Q ss_pred cEEEEecCCCCcCCHHHHHHHH-HhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccC
Q 012210 396 PILAIAGDQDLICPPEAVEETV-KLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 466 (468)
Q Consensus 396 PvLiI~G~~D~ivp~~~~~~l~-~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~ 466 (468)
|+|+|+|++|.++|++.++.+. +.+++. +++++ ++++|+.+.+ .|+++.+.|.+||++...
T Consensus 210 P~l~i~g~~D~~~~~~~~~~~~~~~~~~~--~~~~~--~~~gH~~~~~------~p~~~~~~i~~fl~~~~~ 271 (279)
T 4g9e_A 210 PIAVVNGRDEPFVELDFVSKVKFGNLWEG--KTHVI--DNAGHAPFRE------APAEFDAYLARFIRDCTQ 271 (279)
T ss_dssp CEEEEEETTCSSBCHHHHTTCCCSSBGGG--SCEEE--TTCCSCHHHH------SHHHHHHHHHHHHHHHHS
T ss_pred CEEEEEcCCCcccchHHHHHHhhccCCCC--eEEEE--CCCCcchHHh------CHHHHHHHHHHHHHHhhh
Confidence 9999999999999999988887 777765 77888 8999999997 999999999999997743
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=7.1e-18 Score=176.71 Aligned_cols=264 Identities=16% Similarity=0.172 Sum_probs=151.4
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|++.|-...+..+++.|+ .+||.|+++|+.|++...... ...++++++++ +|+.++++++.
T Consensus 261 vv~~HG~~~~~~~~~~~~~~l~---~~G~~v~~~D~~G~G~S~~~~-----------~~~~~~~~~~~-~d~~~~~~~l~ 325 (555)
T 3i28_A 261 VCLCHGFPESWYSWRYQIPALA---QAGYRVLAMDMKGYGESSAPP-----------EIEEYCMEVLC-KEMVTFLDKLG 325 (555)
T ss_dssp EEEECCTTCCGGGGTTHHHHHH---HTTCEEEEECCTTSTTSCCCS-----------CGGGGSHHHHH-HHHHHHHHHHT
T ss_pred EEEEeCCCCchhHHHHHHHHHH---hCCCEEEEecCCCCCCCCCCC-----------CcccccHHHHH-HHHHHHHHHcC
Confidence 3443445455566677888888 889999999999987632110 01244677776 88888888874
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchh-hHHhhcc--cCchhhhcCCCCcch
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKS-TLKLLLP--LADPAQALNVPVVPL 313 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~ 313 (468)
. ++++++||||||.+++.+|.++ |++|+++|+++++........ ....+.. ..........+....
T Consensus 326 ~------~~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (555)
T 3i28_A 326 L------SQAVFIGHDWGGMLVWYMALFY-----PERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLYFQEPGVAE 394 (555)
T ss_dssp C------SCEEEEEETHHHHHHHHHHHHC-----GGGEEEEEEESCCCCCCCTTSCHHHHHHTCGGGHHHHHHHSTTHHH
T ss_pred C------CcEEEEEecHHHHHHHHHHHhC-----hHheeEEEEEccCCCCCCcccchHHHHhcCCccchhHHhhCCCchH
Confidence 3 2999999999999999999997 889999999988665433211 1110000 000000000000000
Q ss_pred HhHHHHhcCCCCCchhHHHHHHHhhhccccC----C-HHHHHHHHh------hccCCCcHHHHHHHHHHHhcCcccccC-
Q 012210 314 GALLTAAYPLSSSPPYVFSWLNNLISAEDMM----H-PELLKKLVL------NNFCTIPAKLILQLTTAFREGGLRDRG- 381 (468)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----~-~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~- 381 (468)
..... ....++..++...... . .......+. .............+...+....+....
T Consensus 395 ~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (555)
T 3i28_A 395 AELEQ----------NLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLN 464 (555)
T ss_dssp HHHHH----------CHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHTTTTTHHHHH
T ss_pred HHHhh----------hHHHHHHHHhccccccccccccccccccccccCccccccccccCHHHHHHHHHHHhcccchhHHH
Confidence 00000 0001111111100000 0 000000000 000011112222222222111110000
Q ss_pred --------CccccccccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhH
Q 012210 382 --------GKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQV 453 (468)
Q Consensus 382 --------~~~~~~~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v 453 (468)
...+....+.+|++|+|+|+|++|.++|++.++.+.+.+++. +++++ +++||+.+.+ .|+++
T Consensus 465 ~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~--~~~~~--~~~gH~~~~e------~p~~~ 534 (555)
T 3i28_A 465 WYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPHL--KRGHI--EDCGHWTQMD------KPTEV 534 (555)
T ss_dssp TTSCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTCTTC--EEEEE--TTCCSCHHHH------SHHHH
T ss_pred HHHhccccchhhccccccccccCEEEEEeCCCCCcCHHHHHHHHhhCCCc--eEEEe--CCCCCCcchh------CHHHH
Confidence 001234467789999999999999999999999999999987 88888 9999999997 89999
Q ss_pred HHHHHHHHhhccC
Q 012210 454 YPCIVQFLGRYDS 466 (468)
Q Consensus 454 ~~~I~~FL~~~~~ 466 (468)
.+.|.+||+++..
T Consensus 535 ~~~i~~fl~~~~~ 547 (555)
T 3i28_A 535 NQILIKWLDSDAR 547 (555)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHhccC
Confidence 9999999998753
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.3e-17 Score=160.67 Aligned_cols=230 Identities=14% Similarity=0.207 Sum_probs=139.3
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.+++.|-...+..++..|+ . ||+|+++|+.|+++.-. . ....+++.+++ +|+.++++++.
T Consensus 70 vv~lHG~~~~~~~~~~~~~~L~---~-g~~vi~~D~~G~gG~s~---------~---~~~~~~~~~~~-~~l~~~l~~l~ 132 (306)
T 2r11_A 70 LVLLHGALFSSTMWYPNIADWS---S-KYRTYAVDIIGDKNKSI---------P---ENVSGTRTDYA-NWLLDVFDNLG 132 (306)
T ss_dssp EEEECCTTTCGGGGTTTHHHHH---H-HSEEEEECCTTSSSSCE---------E---CSCCCCHHHHH-HHHHHHHHHTT
T ss_pred EEEECCCCCCHHHHHHHHHHHh---c-CCEEEEecCCCCCCCCC---------C---CCCCCCHHHHH-HHHHHHHHhcC
Confidence 4444555555556677777777 5 99999999999833100 0 01234677776 88888887764
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhH
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAL 316 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
. ++++++||||||.+++.+|.++ |++|+++|++++............
T Consensus 133 ~------~~~~lvG~S~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~---------------------- 179 (306)
T 2r11_A 133 I------EKSHMIGLSLGGLHTMNFLLRM-----PERVKSAAILSPAETFLPFHHDFY---------------------- 179 (306)
T ss_dssp C------SSEEEEEETHHHHHHHHHHHHC-----GGGEEEEEEESCSSBTSCCCHHHH----------------------
T ss_pred C------CceeEEEECHHHHHHHHHHHhC-----ccceeeEEEEcCccccCcccHHHH----------------------
Confidence 3 3899999999999999999997 889999999998766532211100
Q ss_pred HHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccC------Ccccccccc
Q 012210 317 LTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRG------GKFFYKDHI 390 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l 390 (468)
....+... ......+...+.... ......+.. .......+.. .+..+. ........+
T Consensus 180 -~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~-------------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l 242 (306)
T 2r11_A 180 -KYALGLTA-SNGVETFLNWMMNDQ-NVLHPIFVK-------------QFKAGVMWQD-GSRNPNPNADGFPYVFTDEEL 242 (306)
T ss_dssp -HHHHTTTS-TTHHHHHHHHHTTTC-CCSCHHHHH-------------HHHHHHHCCS-SSCCCCCCTTSSSCBCCHHHH
T ss_pred -HHHhHHHH-HHHHHHHHHHhhCCc-ccccccccc-------------ccHHHHHHHH-hhhhhhhhccCCCCCCCHHHH
Confidence 00000000 000000000000000 000000000 0000001000 011110 011223457
Q ss_pred CccCccEEEEecCCCCcCCHHHHHHHH-HhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 391 HKCNIPILAIAGDQDLICPPEAVEETV-KLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 391 ~~I~vPvLiI~G~~D~ivp~~~~~~l~-~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
.+|++|+|+|+|++|.++|++.+.++. +.+++. +++++ ++++|+.+.+ .|+++.+.|.+||++
T Consensus 243 ~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~--~~~~~--~~~gH~~~~e------~p~~~~~~i~~fl~~ 306 (306)
T 2r11_A 243 RSARVPILLLLGEHEVIYDPHSALHRASSFVPDI--EAEVI--KNAGHVLSME------QPTYVNERVMRFFNA 306 (306)
T ss_dssp HTCCSCEEEEEETTCCSSCHHHHHHHHHHHSTTC--EEEEE--TTCCTTHHHH------SHHHHHHHHHHHHC-
T ss_pred hcCCCCEEEEEeCCCcccCHHHHHHHHHHHCCCC--EEEEe--CCCCCCCccc------CHHHHHHHHHHHHhC
Confidence 789999999999999999999887555 468876 88888 9999999987 899999999999964
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A | Back alignment and structure |
|---|
Probab=99.76 E-value=1.1e-17 Score=160.76 Aligned_cols=225 Identities=15% Similarity=0.126 Sum_probs=133.4
Q ss_pred HHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeec-CChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEE
Q 012210 173 LSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYD-WDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGH 251 (468)
Q Consensus 173 ~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D-~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGh 251 (468)
+++.|+ ++|+|+++|+.|++........ .+. +++++++ +|+.++++++.. ++++++||
T Consensus 60 ~~~~L~----~~~~vi~~D~~G~G~s~~~~~~----------~~~~~~~~~~~-~~l~~~l~~l~~------~~~~lvG~ 118 (286)
T 2qmq_A 60 DMQEII----QNFVRVHVDAPGMEEGAPVFPL----------GYQYPSLDQLA-DMIPCILQYLNF------STIIGVGV 118 (286)
T ss_dssp HHHHHH----TTSCEEEEECTTTSTTCCCCCT----------TCCCCCHHHHH-HTHHHHHHHHTC------CCEEEEEE
T ss_pred hhHHHh----cCCCEEEecCCCCCCCCCCCCC----------CCCccCHHHHH-HHHHHHHHHhCC------CcEEEEEE
Confidence 455555 5799999999998653111100 111 3677886 999999988743 28999999
Q ss_pred ehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCchhHH
Q 012210 252 SMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVF 331 (468)
Q Consensus 252 S~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (468)
||||.+++.+|.++ |++|+++|+++++............. ..... .....
T Consensus 119 S~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~--------------------~~~~~-----~~~~~ 168 (286)
T 2qmq_A 119 GAGAYILSRYALNH-----PDTVEGLVLINIDPNAKGWMDWAAHK--------------------LTGLT-----SSIPD 168 (286)
T ss_dssp THHHHHHHHHHHHC-----GGGEEEEEEESCCCCCCCHHHHHHHH--------------------HHHTT-----SCHHH
T ss_pred ChHHHHHHHHHHhC-----hhheeeEEEECCCCcccchhhhhhhh--------------------hcccc-----ccchH
Confidence 99999999999987 88999999999865432211110000 00000 00000
Q ss_pred HHHHHhhhccc-cCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecCCCCcCCH
Q 012210 332 SWLNNLISAED-MMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPP 410 (468)
Q Consensus 332 ~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~D~ivp~ 410 (468)
..+...+.... ...++..+.+...............+...+.... ........+.+|++|+|+|+|++|.++|
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~i~~P~lii~G~~D~~~~- 242 (286)
T 2qmq_A 169 MILGHLFSQEELSGNSELIQKYRGIIQHAPNLENIELYWNSYNNRR-----DLNFERGGETTLKCPVMLVVGDQAPHED- 242 (286)
T ss_dssp HHHHHHSCHHHHHTTCHHHHHHHHHHHTCTTHHHHHHHHHHHHTCC-----CCCSEETTEECCCSCEEEEEETTSTTHH-
T ss_pred HHHHHHhcCCCCCcchHHHHHHHHHHHhcCCcchHHHHHHHHhhhh-----hhhhhhchhccCCCCEEEEecCCCcccc-
Confidence 11111111000 0011222222211111222222333333332110 0111235678899999999999999997
Q ss_pred HHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 411 EAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 411 ~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
...+.+.+.++. ..+++++ ++++|+.+.+ .|+++.+.|.+||++
T Consensus 243 ~~~~~~~~~~~~-~~~~~~~--~~~gH~~~~e------~p~~~~~~i~~fl~~ 286 (286)
T 2qmq_A 243 AVVECNSKLDPT-QTSFLKM--ADSGGQPQLT------QPGKLTEAFKYFLQG 286 (286)
T ss_dssp HHHHHHHHSCGG-GEEEEEE--TTCTTCHHHH------CHHHHHHHHHHHHCC
T ss_pred HHHHHHHHhcCC-CceEEEe--CCCCCccccc------ChHHHHHHHHHHhcC
Confidence 455666666662 3488888 9999999997 899999999999963
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.2e-17 Score=157.84 Aligned_cols=239 Identities=11% Similarity=0.008 Sum_probs=145.2
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|++.+-...+..++..|+ ++|+|+++|+.|++..-.. ..++++++++ +|+.++++.+.
T Consensus 24 vv~lHG~~~~~~~~~~~~~~L~----~~~~v~~~D~~G~G~S~~~-------------~~~~~~~~~~-~~~~~~l~~l~ 85 (264)
T 3ibt_A 24 LFLLSGWCQDHRLFKNLAPLLA----RDFHVICPDWRGHDAKQTD-------------SGDFDSQTLA-QDLLAFIDAKG 85 (264)
T ss_dssp EEEECCTTCCGGGGTTHHHHHT----TTSEEEEECCTTCSTTCCC-------------CSCCCHHHHH-HHHHHHHHHTT
T ss_pred EEEEcCCCCcHhHHHHHHHHHH----hcCcEEEEccccCCCCCCC-------------ccccCHHHHH-HHHHHHHHhcC
Confidence 4554555566666777777776 5699999999999763110 2345778886 88888888764
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhH
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAL 316 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
. ++++++||||||.+++.+|.+++ |++|+++|++++.. .........+....... ...
T Consensus 86 ~------~~~~lvGhS~Gg~ia~~~a~~~~----p~~v~~lvl~~~~~--~~~~~~~~~~~~~~~~~--------~~~-- 143 (264)
T 3ibt_A 86 I------RDFQMVSTSHGCWVNIDVCEQLG----AARLPKTIIIDWLL--QPHPGFWQQLAEGQHPT--------EYV-- 143 (264)
T ss_dssp C------CSEEEEEETTHHHHHHHHHHHSC----TTTSCEEEEESCCS--SCCHHHHHHHHHTTCTT--------THH--
T ss_pred C------CceEEEecchhHHHHHHHHHhhC----hhhhheEEEecCCC--CcChhhcchhhcccChh--------hHH--
Confidence 3 28999999999999999999841 56899999999876 22221221111110000 000
Q ss_pred HHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCcc
Q 012210 317 LTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIP 396 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP 396 (468)
......+..++... .++.....+.... ...+...+......+...... .......+.+|++|
T Consensus 144 -----------~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~i~~P 205 (264)
T 3ibt_A 144 -----------AGRQSFFDEWAETT--DNADVLNHLRNEM-PWFHGEMWQRACREIEANYRT----WGSPLDRMDSLPQK 205 (264)
T ss_dssp -----------HHHHHHHHHHHTTC--CCHHHHHHHHHTG-GGSCHHHHHHHHHHHHHHHHH----HSSHHHHHHTCSSC
T ss_pred -----------HHHHHHHHHhcccC--CcHHHHHHHHHhh-hhccchhHHHHHHHhccchhh----ccchhhcccccCCC
Confidence 00111111111111 2333333322222 222222222222221110000 00123567889999
Q ss_pred EEEEec--CCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 397 ILAIAG--DQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 397 vLiI~G--~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
+|+|+| +.|..++++..+.+.+.+++. +++++ +++||+.|.+ .|+++.+.|.+||++
T Consensus 206 ~lii~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~i--~~~gH~~~~e------~p~~~~~~i~~fl~~ 264 (264)
T 3ibt_A 206 PEICHIYSQPLSQDYRQLQLEFAAGHSWF--HPRHI--PGRTHFPSLE------NPVAVAQAIREFLQA 264 (264)
T ss_dssp CEEEEEECCSCCHHHHHHHHHHHHHCTTE--EEEEC--CCSSSCHHHH------CHHHHHHHHHHHTC-
T ss_pred eEEEEecCCccchhhHHHHHHHHHhCCCc--eEEEc--CCCCCcchhh------CHHHHHHHHHHHHhC
Confidence 999965 555556677889999999976 88888 9999999998 999999999999863
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.75 E-value=2.6e-17 Score=152.95 Aligned_cols=205 Identities=18% Similarity=0.196 Sum_probs=131.8
Q ss_pred hcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHH
Q 012210 182 EEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAM 261 (468)
Q Consensus 182 ~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~ 261 (468)
.+||.|+++|+.|++..- ....+++++++ +|+.+++++........ +++++||||||.+++.+
T Consensus 39 ~~g~~v~~~d~~g~g~s~--------------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~ 101 (245)
T 3e0x_A 39 LEDYNCILLDLKGHGESK--------------GQCPSTVYGYI-DNVANFITNSEVTKHQK--NITLIGYSMGGAIVLGV 101 (245)
T ss_dssp CTTSEEEEECCTTSTTCC--------------SCCCSSHHHHH-HHHHHHHHHCTTTTTCS--CEEEEEETHHHHHHHHH
T ss_pred HhCCEEEEecCCCCCCCC--------------CCCCcCHHHHH-HHHHHHHHhhhhHhhcC--ceEEEEeChhHHHHHHH
Confidence 489999999999986621 01234677776 88888884443322222 89999999999999999
Q ss_pred HHh-cCCCCCcccccceeEEccccccCCch-hhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCchhHHHHHHHhhh
Q 012210 262 LSR-CGFEGRESRLAAIVTLASSLDYTSSK-STLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLIS 339 (468)
Q Consensus 262 a~~-~~~~~~p~~V~~lVllap~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 339 (468)
|.+ + |+ |+++|++++........ .....+. ..... .+.....
T Consensus 102 a~~~~-----p~-v~~lvl~~~~~~~~~~~~~~~~~~~------------------------~~~~~-----~~~~~~~- 145 (245)
T 3e0x_A 102 ALKKL-----PN-VRKVVSLSGGARFDKLDKDFMEKIY------------------------HNQLD-----NNYLLEC- 145 (245)
T ss_dssp HTTTC-----TT-EEEEEEESCCSBCTTSCHHHHHHHH------------------------TTCCC-----HHHHHHH-
T ss_pred HHHhC-----cc-ccEEEEecCCCccccccHHHHHHHH------------------------HHHHH-----hhcCccc-
Confidence 998 7 77 99999999877653221 1111110 00000 0000000
Q ss_pred ccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecCCCCcCCHHHHHHHHHh
Q 012210 340 AEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKL 419 (468)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ 419 (468)
... .........+... ...+......+. ... ..++...+.++++|+|+++|++|.++|++.++.+.+.
T Consensus 146 ~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~---------~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~ 213 (245)
T 3e0x_A 146 IGG-IDNPLSEKYFETL-EKDPDIMINDLI-ACK---------LIDLVDNLKNIDIPVKAIVAKDELLTLVEYSEIIKKE 213 (245)
T ss_dssp HTC-SCSHHHHHHHTTS-CSSHHHHHHHHH-HHH---------HCBCGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHH
T ss_pred ccc-cchHHHHHHHHHH-hcCcHHHHHHHH-Hhc---------cccHHHHHHhCCCCEEEEEeCCCCCCCHHHHHHHHHH
Confidence 000 1112222222111 222222222222 221 1234567888999999999999999999999999999
Q ss_pred CCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHH
Q 012210 420 LPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFL 461 (468)
Q Consensus 420 ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL 461 (468)
+++. +++++ ++++|+.+.+ .++++.+.|.+||
T Consensus 214 ~~~~--~~~~~--~~~gH~~~~~------~~~~~~~~i~~fl 245 (245)
T 3e0x_A 214 VENS--ELKIF--ETGKHFLLVV------NAKGVAEEIKNFI 245 (245)
T ss_dssp SSSE--EEEEE--SSCGGGHHHH------THHHHHHHHHTTC
T ss_pred cCCc--eEEEe--CCCCcceEEe------cHHHHHHHHHhhC
Confidence 9975 88888 8999999987 8899999999885
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.74 E-value=3.9e-18 Score=169.73 Aligned_cols=71 Identities=23% Similarity=0.222 Sum_probs=63.0
Q ss_pred cccccCccCccEEEEecCCCCcCCHHHHHHHHHhC----CCCceeEEEecCCC-CCCCCcccccccccchhhHHHHHHHH
Q 012210 386 YKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLL----PEDLVTYKVFGEPS-GPHYAHYDLVGGRMAVEQVYPCIVQF 460 (468)
Q Consensus 386 ~~~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~i----p~~~~~~~v~~~~~-agH~~H~e~~~~~~~pe~v~~~I~~F 460 (468)
+...+.+|+||+|+|+|++|.++|++.++++.+.+ ++. +++++ ++ +||+.|.+ +|+++.+.|.+|
T Consensus 299 ~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~g~~~--~~~~i--~~~~gH~~~~e------~p~~~~~~i~~f 368 (377)
T 3i1i_A 299 LEEALSNVEANVLMIPCKQDLLQPSRYNYKMVDLLQKQGKYA--EVYEI--ESINGHMAGVF------DIHLFEKKVYEF 368 (377)
T ss_dssp HHHHHHTCCSEEEEECBTTCSSSCTHHHHHHHHHHHHTTCCE--EECCB--CCTTGGGHHHH------CGGGTHHHHHHH
T ss_pred HHHHHhhCCCCEEEEecCCccccCHHHHHHHHHHHHhcCCCc--eEEEc--CCCCCCcchhc------CHHHHHHHHHHH
Confidence 34567889999999999999999999999999999 765 77777 87 89999998 899999999999
Q ss_pred HhhccC
Q 012210 461 LGRYDS 466 (468)
Q Consensus 461 L~~~~~ 466 (468)
|+++..
T Consensus 369 l~~~~~ 374 (377)
T 3i1i_A 369 LNRKVS 374 (377)
T ss_dssp HHSCCS
T ss_pred HHhhhh
Confidence 998754
|
| >2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.73 E-value=2.2e-17 Score=164.19 Aligned_cols=262 Identities=13% Similarity=0.057 Sum_probs=134.7
Q ss_pred hhcCceEeccCccc--cccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcE-EEEEEehhHHH
Q 012210 181 IEEGQLSVSPQLFD--LQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKL-LAIGHSMGGIL 257 (468)
Q Consensus 181 l~~Gy~viapdl~~--~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v-~lvGhS~GG~i 257 (468)
+.+||+|+++|+.| ++.........-....+....-++++++++ +|+.++++.+.. +++ +++||||||.+
T Consensus 86 ~~~g~~vi~~D~~G~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~dl~~~l~~l~~------~~~~~lvGhS~Gg~i 158 (366)
T 2pl5_A 86 DTNQYFIICSNVIGGCKGSSGPLSIHPETSTPYGSRFPFVSIQDMV-KAQKLLVESLGI------EKLFCVAGGSMGGMQ 158 (366)
T ss_dssp ETTTCEEEEECCTTCSSSSSSTTSBCTTTSSBCGGGSCCCCHHHHH-HHHHHHHHHTTC------SSEEEEEEETHHHHH
T ss_pred cccccEEEEecCCCcccCCCCCCCCCCCCCccccCCCCcccHHHHH-HHHHHHHHHcCC------ceEEEEEEeCccHHH
Confidence 37899999999999 544211100000000000000135677776 888888876632 288 89999999999
Q ss_pred HHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhh-cc-c-CchhhhcC-CC-CcchHh-HHHHhcC--CCCCchh
Q 012210 258 LYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLL-LP-L-ADPAQALN-VP-VVPLGA-LLTAAYP--LSSSPPY 329 (468)
Q Consensus 258 a~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~-~~-~-~~~~~~~~-~~-~~~~~~-~~~~~~~--~~~~~~~ 329 (468)
++.+|.++ |++|+++|+++++............. .. + ..+..... .. ..+... .+..... .......
T Consensus 159 a~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (366)
T 2pl5_A 159 ALEWSIAY-----PNSLSNCIVMASTAEHSAMQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDK 233 (366)
T ss_dssp HHHHHHHS-----TTSEEEEEEESCCSBCCHHHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHH
T ss_pred HHHHHHhC-----cHhhhheeEeccCccCCCccchhhHHHHHHHHhCcccccccccccccccchHHHHHhhccccCCHHH
Confidence 99999998 88999999999876543221110000 00 0 00000000 00 000000 0000000 0000000
Q ss_pred HHHHHHHhhhcccc-CCHHHHHHHHh----hccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecCC
Q 012210 330 VFSWLNNLISAEDM-MHPELLKKLVL----NNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQ 404 (468)
Q Consensus 330 ~~~~l~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~ 404 (468)
+..++......... ........+.. ..........+......+...... ...++...+.+|++|+|+|+|++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~i~~P~lii~G~~ 310 (366)
T 2pl5_A 234 MREKFGRNPPRGNILSTDFAVGSYLIYQGESFVDRFDANSYIYVTKALDHYSLG---KGKELTAALSNATCRFLVVSYSS 310 (366)
T ss_dssp HHHHHTTSCCSSCTTTTTTTSCGGGGSTTCCSSSCCCHHHHHHHHHHHHHCBCC---SHHHHHHHHTTCCSEEEEEEETT
T ss_pred HHHHhhhhhhcccccchhhhHHHHHHHHHHhhhcccChhHHHHHHhhhhhhccc---cccchhhhhccCCCCEEEEecCC
Confidence 11111000000000 00000000000 001122233333333332211100 00113346789999999999999
Q ss_pred CCcCCHHHHHHHHHhCCCC--ceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 405 DLICPPEAVEETVKLLPED--LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 405 D~ivp~~~~~~l~~~ip~~--~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
|.++|++.++++.+.+++. ..+++++. ++++|+.+.+ .++++.+.|.+||+++
T Consensus 311 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~gH~~~~e------~p~~~~~~i~~fl~~~ 365 (366)
T 2pl5_A 311 DWLYPPAQSREIVKSLEAADKRVFYVELQ-SGEGHDSFLL------KNPKQIEILKGFLENP 365 (366)
T ss_dssp CCSSCHHHHHHHHHHHHHTTCCEEEEEEC-CCBSSGGGGS------CCHHHHHHHHHHHHCC
T ss_pred CcccCHHHHHHHHHHhhhcccCeEEEEeC-CCCCcchhhc------ChhHHHHHHHHHHccC
Confidence 9999999999999999832 23666651 4899999997 8899999999999865
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=4.3e-17 Score=162.92 Aligned_cols=102 Identities=15% Similarity=0.142 Sum_probs=77.7
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|++.|-...+..++..|+ .+||+|+++|+.|++...... ...++++.+++ +|+.++++++.
T Consensus 30 vv~~hG~~~~~~~~~~~~~~l~---~~g~~vi~~d~~g~g~s~~~~-----------~~~~~~~~~~~-~~~~~~~~~l~ 94 (356)
T 2e3j_A 30 VVLLHGFPESWYSWRHQIPALA---GAGYRVVAIDQRGYGRSSKYR-----------VQKAYRIKELV-GDVVGVLDSYG 94 (356)
T ss_dssp EEEECCTTCCGGGGTTTHHHHH---HTTCEEEEECCTTSTTSCCCC-----------SGGGGSHHHHH-HHHHHHHHHTT
T ss_pred EEEECCCCCcHHHHHHHHHHHH---HcCCEEEEEcCCCCCCCCCCC-----------cccccCHHHHH-HHHHHHHHHcC
Confidence 4555566666666777888888 889999999999986632110 00134666776 88888888763
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcccc
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSL 284 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~ 284 (468)
. ++++++||||||.+++.+|.++ |++|+++|+++++.
T Consensus 95 ~------~~~~l~G~S~Gg~~a~~~a~~~-----p~~v~~lvl~~~~~ 131 (356)
T 2e3j_A 95 A------EQAFVVGHDWGAPVAWTFAWLH-----PDRCAGVVGISVPF 131 (356)
T ss_dssp C------SCEEEEEETTHHHHHHHHHHHC-----GGGEEEEEEESSCC
T ss_pred C------CCeEEEEECHhHHHHHHHHHhC-----cHhhcEEEEECCcc
Confidence 3 3899999999999999999987 88999999998765
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=4.7e-17 Score=158.79 Aligned_cols=232 Identities=15% Similarity=0.115 Sum_probs=128.8
Q ss_pred hcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHH
Q 012210 182 EEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAM 261 (468)
Q Consensus 182 ~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~ 261 (468)
..||+|+++|+.|++..-.. . . ..++++.+++ +|+.++++.+. .. +++++||||||.+++.+
T Consensus 61 ~~~~~vi~~D~~G~G~S~~~--~-----~----~~~~~~~~~~-~dl~~l~~~l~----~~--~~~lvGhS~Gg~ia~~~ 122 (317)
T 1wm1_A 61 PERYKVLLFDQRGCGRSRPH--A-----S----LDNNTTWHLV-ADIERLREMAG----VE--QWLVFGGSWGSTLALAY 122 (317)
T ss_dssp TTTEEEEEECCTTSTTCBST--T-----C----CTTCSHHHHH-HHHHHHHHHTT----CS--SEEEEEETHHHHHHHHH
T ss_pred ccCCeEEEECCCCCCCCCCC--c-----c----cccccHHHHH-HHHHHHHHHcC----CC--cEEEEEeCHHHHHHHHH
Confidence 57999999999999763110 0 0 1234666776 88877777653 33 89999999999999999
Q ss_pred HHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCC---chhHHHHHHHhh
Q 012210 262 LSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSS---PPYVFSWLNNLI 338 (468)
Q Consensus 262 a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~ 338 (468)
|.++ |++|+++|++++...... ........ ... . .. ...+..+...... ......+...+.
T Consensus 123 a~~~-----p~~v~~lvl~~~~~~~~~---~~~~~~~~-~~~---~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (317)
T 1wm1_A 123 AQTH-----PERVSEMVLRGIFTLRKQ---RLHWYYQD-GAS---R--FF--PEKWERVLSILSDDERKDVIAAYRQRLT 186 (317)
T ss_dssp HHHC-----GGGEEEEEEESCCCCCHH---HHHHHHTS-SGG---G--TS--HHHHHHHHTTSCTTGGGCHHHHHHHHHT
T ss_pred HHHC-----ChheeeeeEeccCCCchh---hhhHHhhc-cch---h--hc--HHHHHHHHhhccchhhcchHHHHHhhhc
Confidence 9998 999999999986432211 01000000 000 0 00 0011111110000 011112222221
Q ss_pred hccccCCHHHH----HH---HHhhc--cCCCc-------HHHHHHHHH----HHhcCcccccCCccc-cccccCccC-cc
Q 012210 339 SAEDMMHPELL----KK---LVLNN--FCTIP-------AKLILQLTT----AFREGGLRDRGGKFF-YKDHIHKCN-IP 396 (468)
Q Consensus 339 ~~~~~~~~~~~----~~---~~~~~--~~~~~-------~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~l~~I~-vP 396 (468)
.. +.... .. +.... ....+ ......+.. .+....+.. ... ....+.+|+ +|
T Consensus 187 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~P 259 (317)
T 1wm1_A 187 SA----DPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYFTHLGFLE---SDDQLLRNVPLIRHIP 259 (317)
T ss_dssp CS----CHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHHHHHHHHHHHHHHHHTGGGCS---STTHHHHTGGGGTTSC
T ss_pred CC----CccccccccccccccccchhhccCCcccccccccchhhhHHHhhhhhhhcccccc---cchhhHhhcccccCCC
Confidence 11 11110 00 00000 00001 010001100 011111110 011 234567785 99
Q ss_pred EEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 397 ILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 397 vLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
+|+|+|++|.++|++.++.+.+.+|++ +++++ +++||+.+.+ +.++++.+.|.+|+.+
T Consensus 260 ~lii~G~~D~~~~~~~~~~l~~~~p~~--~~~~i--~~~gH~~~~~-----~~~~~~~~~i~~f~~~ 317 (317)
T 1wm1_A 260 AVIVHGRYDMACQVQNAWDLAKAWPEA--ELHIV--EGAGHSYDEP-----GILHQLMIATDRFAGK 317 (317)
T ss_dssp EEEEEETTCSSSCHHHHHHHHHHCTTS--EEEEE--TTCCSSTTSH-----HHHHHHHHHHHHHTC-
T ss_pred EEEEEecCCCCCCHHHHHHHHhhCCCc--eEEEE--CCCCCCCCCc-----chHHHHHHHHHHHhcC
Confidence 999999999999999999999999987 88888 9999988653 2578899999999864
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A | Back alignment and structure |
|---|
Probab=99.73 E-value=4.2e-17 Score=156.28 Aligned_cols=260 Identities=12% Similarity=0.082 Sum_probs=146.7
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|.+.+-...+..++..|+ ++|.|+++|+.|++..-... . ....++++++++ +|+.++++++.
T Consensus 31 vv~lHG~~~~~~~~~~~~~~l~----~~~~vi~~D~~G~G~S~~~~------~---~~~~~~~~~~~~-~~~~~~l~~~~ 96 (297)
T 2qvb_A 31 IVFQHGNPTSSYLWRNIMPHLE----GLGRLVACDLIGMGASDKLS------P---SGPDRYSYGEQR-DFLFALWDALD 96 (297)
T ss_dssp EEEECCTTCCGGGGTTTGGGGT----TSSEEEEECCTTSTTSCCCS------S---CSTTSSCHHHHH-HHHHHHHHHTT
T ss_pred EEEECCCCchHHHHHHHHHHHh----hcCeEEEEcCCCCCCCCCCC------C---ccccCcCHHHHH-HHHHHHHHHcC
Confidence 4443444444444555555554 56999999999987631110 0 000125777886 88888888764
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhH
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAL 316 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
. .++++++||||||.+++.+|.++ |++|+++|++++.............. .........+. ....
T Consensus 97 ~-----~~~~~lvG~S~Gg~~a~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~~ 161 (297)
T 2qvb_A 97 L-----GDHVVLVLHDWGSALGFDWANQH-----RDRVQGIAFMEAIVTPMTWADWPPAV---RGVFQGFRSPQ--GEPM 161 (297)
T ss_dssp C-----CSCEEEEEEEHHHHHHHHHHHHS-----GGGEEEEEEEEECCSCBCGGGSCGGG---HHHHHHHTSTT--HHHH
T ss_pred C-----CCceEEEEeCchHHHHHHHHHhC-----hHhhheeeEeccccCCccCCCCChHH---HHHHHHHhccc--chhh
Confidence 3 03899999999999999999997 88999999999866422110000000 00000000000 0000
Q ss_pred HHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCC-CcHHHHHHHHHHHhcCcccc-c-CCccccccccCcc
Q 012210 317 LTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCT-IPAKLILQLTTAFREGGLRD-R-GGKFFYKDHIHKC 393 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~l~~I 393 (468)
.. ....++..++... .......+.+..+....... ........+...+....... . ....++...+.+|
T Consensus 162 ~~------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 233 (297)
T 2qvb_A 162 AL------EHNIFVERVLPGA--ILRQLSDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAEVVALVNEYRSWLEET 233 (297)
T ss_dssp HH------TTCHHHHTHHHHT--CSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHC
T ss_pred hc------cccHHHHHHHhcc--ccccCCHHHHHHHHHHhcCcccchhhHHHHHHhccccCCchhhHHHHHHHHhhcccc
Confidence 00 0001111111110 01122344444433222211 12222222222221000000 0 0011234567789
Q ss_pred CccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 394 NIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 394 ~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
++|+|+|+|++|.++|++.++.+.+.+++ +++++ +++|+.+.+ .|+++.+.|.+||+++.
T Consensus 234 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~---~~~~~---~~gH~~~~~------~p~~~~~~i~~fl~~~~ 293 (297)
T 2qvb_A 234 DMPKLFINAEPGAIITGRIRDYVRSWPNQ---TEITV---PGVHFVQED------SPEEIGAAIAQFVRRLR 293 (297)
T ss_dssp CSCEEEEEEEECSSSCHHHHHHHHTSSSE---EEEEE---EESSCGGGT------CHHHHHHHHHHHHHHHH
T ss_pred cccEEEEecCCCCcCCHHHHHHHHHHcCC---eEEEe---cCccchhhh------CHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999986 55554 689999997 89999999999999764
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.73 E-value=8.5e-17 Score=158.06 Aligned_cols=206 Identities=12% Similarity=0.140 Sum_probs=122.9
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCcccc-ccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDL-QERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYI 235 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~-~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l 235 (468)
++-.|++.+-...+..+++.|+ .+||+|+++|++|| +..- +. ..++++++++ +|+.++++++
T Consensus 38 VvllHG~g~~~~~~~~~~~~L~---~~G~~Vi~~D~rGh~G~S~----------~~---~~~~~~~~~~-~D~~~~~~~l 100 (305)
T 1tht_A 38 ILIASGFARRMDHFAGLAEYLS---TNGFHVFRYDSLHHVGLSS----------GS---IDEFTMTTGK-NSLCTVYHWL 100 (305)
T ss_dssp EEEECTTCGGGGGGHHHHHHHH---TTTCCEEEECCCBCC---------------------CCCHHHHH-HHHHHHHHHH
T ss_pred EEEecCCccCchHHHHHHHHHH---HCCCEEEEeeCCCCCCCCC----------Cc---ccceehHHHH-HHHHHHHHHH
Confidence 3443444444556677888887 88999999999998 5420 10 1245677876 9999999999
Q ss_pred HhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHh
Q 012210 236 RAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGA 315 (468)
Q Consensus 236 ~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (468)
+. .+.. +++++||||||.+++.+|.+ + +|+++|++++...... .......... ...+ ..
T Consensus 101 ~~-~~~~--~~~lvGhSmGG~iA~~~A~~------~-~v~~lvl~~~~~~~~~---~~~~~~~~~~----~~~~---~~- 159 (305)
T 1tht_A 101 QT-KGTQ--NIGLIAASLSARVAYEVISD------L-ELSFLITAVGVVNLRD---TLEKALGFDY----LSLP---ID- 159 (305)
T ss_dssp HH-TTCC--CEEEEEETHHHHHHHHHTTT------S-CCSEEEEESCCSCHHH---HHHHHHSSCG----GGSC---GG-
T ss_pred Hh-CCCC--ceEEEEECHHHHHHHHHhCc------c-CcCEEEEecCchhHHH---HHHHHhhhhh----hhcc---hh-
Confidence 83 3444 99999999999999999976 6 8999999876432110 0000000000 0000 00
Q ss_pred HHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCc
Q 012210 316 LLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNI 395 (468)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~v 395 (468)
..+ .. +. ... ....... ....... ..+. ...+....+.+|++
T Consensus 160 ----~~~-----~~----~~-~~~--~~~~~~~---------------~~~~~~~----~~~~---~~~~~~~~l~~i~~ 201 (305)
T 1tht_A 160 ----ELP-----ND----LD-FEG--HKLGSEV---------------FVRDCFE----HHWD---TLDSTLDKVANTSV 201 (305)
T ss_dssp ----GCC-----SE----EE-ETT--EEEEHHH---------------HHHHHHH----TTCS---SHHHHHHHHTTCCS
T ss_pred ----hCc-----cc----cc-ccc--cccCHHH---------------HHHHHHh----cccc---chhhHHHHHhhcCC
Confidence 000 00 00 000 0000000 0000000 0000 00011245788999
Q ss_pred cEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCc
Q 012210 396 PILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAH 440 (468)
Q Consensus 396 PvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H 440 (468)
|+|+|+|++|.++|++.++.+++.++..+.+++++ ++++|..+
T Consensus 202 PvLii~G~~D~~vp~~~~~~l~~~i~~~~~~l~~i--~~agH~~~ 244 (305)
T 1tht_A 202 PLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSL--LGSSHDLG 244 (305)
T ss_dssp CEEEEEETTCTTSCHHHHHHHHTTCTTCCEEEEEE--TTCCSCTT
T ss_pred CEEEEEeCCCCccCHHHHHHHHHhcCCCCcEEEEe--CCCCCchh
Confidence 99999999999999999999999997555688888 99999987
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.72 E-value=4.6e-17 Score=156.78 Aligned_cols=212 Identities=12% Similarity=0.097 Sum_probs=144.5
Q ss_pred ccccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHH
Q 012210 155 SSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEY 234 (468)
Q Consensus 155 ~~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~ 234 (468)
+.++-.|.+.|-...+..++..|+ .+||.|+++|+.+++..... ..++++.++. +|+.+++++
T Consensus 29 p~vv~~HG~~~~~~~~~~~~~~l~---~~g~~v~~~d~~G~g~s~~~-------------~~~~~~~~~~-~d~~~~i~~ 91 (290)
T 3ksr_A 29 PGVLFVHGWGGSQHHSLVRAREAV---GLGCICMTFDLRGHEGYASM-------------RQSVTRAQNL-DDIKAAYDQ 91 (290)
T ss_dssp EEEEEECCTTCCTTTTHHHHHHHH---TTTCEEECCCCTTSGGGGGG-------------TTTCBHHHHH-HHHHHHHHH
T ss_pred cEEEEeCCCCCCcCcHHHHHHHHH---HCCCEEEEeecCCCCCCCCC-------------cccccHHHHH-HHHHHHHHH
Confidence 445665666677777888888888 88999999999998652110 1133566776 999999999
Q ss_pred HHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchH
Q 012210 235 IRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLG 314 (468)
Q Consensus 235 l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (468)
+..+...+.++++++||||||.+++.++.++ + ++++++++|........ . .+..
T Consensus 92 l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~-----~--~~~~~l~~p~~~~~~~~---------~----------~~~~ 145 (290)
T 3ksr_A 92 LASLPYVDAHSIAVVGLSYGGYLSALLTRER-----P--VEWLALRSPALYKDAHW---------D----------QPKV 145 (290)
T ss_dssp HHTSTTEEEEEEEEEEETHHHHHHHHHTTTS-----C--CSEEEEESCCCCCSSCT---------T----------SBHH
T ss_pred HHhcCCCCccceEEEEEchHHHHHHHHHHhC-----C--CCEEEEeCcchhhhhhh---------h----------cccc
Confidence 9877544335899999999999999999875 3 88888888765432210 0 0000
Q ss_pred hHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccC
Q 012210 315 ALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCN 394 (468)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~ 394 (468)
.+ . . ...+..+..... .. ........+.+++
T Consensus 146 ~~---------------~---~---------~~~~~~~~~~~~-~~---------------------~~~~~~~~~~~~~ 176 (290)
T 3ksr_A 146 SL---------------N---A---------DPDLMDYRRRAL-AP---------------------GDNLALAACAQYK 176 (290)
T ss_dssp HH---------------H---H---------STTHHHHTTSCC-CG---------------------GGCHHHHHHHHCC
T ss_pred cc---------------c---C---------Chhhhhhhhhhh-hh---------------------ccccHHHHHHhcC
Confidence 00 0 0 000000000000 00 0011123456788
Q ss_pred ccEEEEecCCCCcCCHHHHHHHHHhCCCCc-eeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 395 IPILAIAGDQDLICPPEAVEETVKLLPEDL-VTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 395 vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~-~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
+|+|+++|++|.++|++.++.+.+.+++.. ++++++ ++++|..+.+ ..++.+++.|.+||+++.
T Consensus 177 ~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~gH~~~~~-----~~~~~~~~~i~~fl~~~~ 241 (290)
T 3ksr_A 177 GDVLLVEAENDVIVPHPVMRNYADAFTNARSLTSRVI--AGADHALSVK-----EHQQEYTRALIDWLTEMV 241 (290)
T ss_dssp SEEEEEEETTCSSSCHHHHHHHHHHTTTSSEEEEEEE--TTCCTTCCSH-----HHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEecCCcccChHHHHHHHHHhccCCCceEEEc--CCCCCCCCcc-----hHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999998763 557777 8899977653 367899999999998763
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A | Back alignment and structure |
|---|
Probab=99.72 E-value=1.1e-16 Score=166.01 Aligned_cols=246 Identities=16% Similarity=0.185 Sum_probs=149.5
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|.+.+-...+..++..|+ .+||.|+++|+.|++..-. . ..++++++++ +|+.++++++.
T Consensus 27 VV~lHG~~~~~~~~~~l~~~La---~~Gy~Vi~~D~rG~G~S~~----------~---~~~~s~~~~a-~dl~~~l~~l~ 89 (456)
T 3vdx_A 27 VVLIHGFPLSGHSWERQSAALL---DAGYRVITYDRRGFGQSSQ----------P---TTGYDYDTFA-ADLNTVLETLD 89 (456)
T ss_dssp EEEECCTTCCGGGGTTHHHHHH---HHTEEEEEECCTTSTTSCC----------C---SSCCSHHHHH-HHHHHHHHHHT
T ss_pred EEEECCCCCcHHHHHHHHHHHH---HCCcEEEEECCCCCCCCCC----------C---CCCCCHHHHH-HHHHHHHHHhC
Confidence 4444555555666777888887 8999999999999876311 0 1245778886 99999999884
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhH
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAL 316 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
. ++++++||||||.+++.+|+.+. |++|+++|++++..+......... ........
T Consensus 90 ~------~~v~LvGhS~GG~ia~~~aa~~~----p~~v~~lVli~~~~~~~~~~~~~~--------------~~~~~~~~ 145 (456)
T 3vdx_A 90 L------QDAVLVGFSMGTGEVARYVSSYG----TARIAAVAFLASLEPFLLKTDDNP--------------DGAAPQEF 145 (456)
T ss_dssp C------CSEEEEEEGGGGHHHHHHHHHHC----SSSEEEEEEESCCCSCCBCCSSCC--------------SCSBCHHH
T ss_pred C------CCeEEEEECHHHHHHHHHHHhcc----hhheeEEEEeCCcccccccccccc--------------cccchHHH
Confidence 3 29999999999999999998752 678999999998665432110000 00000000
Q ss_pred HHHhcCC--CCCchhHHHHHHHhhhcc----ccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCcccccccc
Q 012210 317 LTAAYPL--SSSPPYVFSWLNNLISAE----DMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHI 390 (468)
Q Consensus 317 ~~~~~~~--~~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 390 (468)
+..+... .....+...++..++... .....+................... .. .. ...+....+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-----~~--~~~d~~~~l 214 (456)
T 3vdx_A 146 FDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAA----AP-----TT--WYTDFRADI 214 (456)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHTTTTTSBTTTBCHHHHHHHHHHHHTSCTTHHHH----GG-----GG--TTCCCTTTS
T ss_pred HHHHHHhhhccchHHHHHHHHHHhcccccccccccHHHHHHHhhhccccchhhhhh----hh-----hh--hhhhHHHHh
Confidence 0000000 000001111111111110 0111222221111111111000000 00 00 012344678
Q ss_pred CccCccEEEEecCCCCcCCHH-HHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 391 HKCNIPILAIAGDQDLICPPE-AVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 391 ~~I~vPvLiI~G~~D~ivp~~-~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
.+|++|+|+|+|++|.++|++ ..+.+.+.+++. +++++ ++++|+.+.+ .|+.+.+.|.+||++.
T Consensus 215 ~~i~~PvLiI~G~~D~~vp~~~~~~~l~~~~~~~--~~~~i--~gagH~~~~e------~p~~v~~~I~~FL~~~ 279 (456)
T 3vdx_A 215 PRIDVPALILHGTGDRTLPIENTARVFHKALPSA--EYVEV--EGAPHGLLWT------HAEEVNTALLAFLAKA 279 (456)
T ss_dssp TTCCSCCEEEEETTCSSSCGGGTHHHHHHHCTTS--EEEEE--TTCCSCTTTT------THHHHHHHHHHHHHHH
T ss_pred hhCCCCEEEEEeCCCCCcCHHHHHHHHHHHCCCc--eEEEe--CCCCCcchhh------CHHHHHHHHHHHHHHh
Confidence 899999999999999999998 788888888876 88888 9999999987 8999999999999875
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=4.1e-17 Score=157.55 Aligned_cols=231 Identities=11% Similarity=0.053 Sum_probs=130.6
Q ss_pred ccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcE
Q 012210 167 AIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKL 246 (468)
Q Consensus 167 ~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v 246 (468)
...++.+...|+ .+|+|+++|+.|++..-. . ..+|++++++ +|+.++++.+... ++
T Consensus 40 ~~~w~~~~~~L~----~~~rvia~DlrGhG~S~~-----------~--~~~~~~~~~a-~dl~~ll~~l~~~------~~ 95 (276)
T 2wj6_A 40 HRVYKYLIQELD----ADFRVIVPNWRGHGLSPS-----------E--VPDFGYQEQV-KDALEILDQLGVE------TF 95 (276)
T ss_dssp GGGGHHHHHHHT----TTSCEEEECCTTCSSSCC-----------C--CCCCCHHHHH-HHHHHHHHHHTCC------SE
T ss_pred HHHHHHHHHHHh----cCCEEEEeCCCCCCCCCC-----------C--CCCCCHHHHH-HHHHHHHHHhCCC------ce
Confidence 334444555554 689999999999976311 0 1246788887 9999999988543 99
Q ss_pred EEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCC
Q 012210 247 LAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSS 326 (468)
Q Consensus 247 ~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (468)
++|||||||.+++.+|.+++ |++|+++|++++...... ......+... .....+ ...
T Consensus 96 ~lvGhSmGG~va~~~A~~~~----P~rv~~lvl~~~~~~~~~-~~~~~~~~~~------~~~~~~--~~~---------- 152 (276)
T 2wj6_A 96 LPVSHSHGGWVLVELLEQAG----PERAPRGIIMDWLMWAPK-PDFAKSLTLL------KDPERW--REG---------- 152 (276)
T ss_dssp EEEEEGGGHHHHHHHHHHHH----HHHSCCEEEESCCCSSCC-HHHHHHHHHH------HCTTTH--HHH----------
T ss_pred EEEEECHHHHHHHHHHHHhC----HHhhceEEEecccccCCC-chHHHHhhhc------cCcchH--HHH----------
Confidence 99999999999999998741 678999999986432111 1111100000 000000 000
Q ss_pred chhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecCCCC
Q 012210 327 PPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDL 406 (468)
Q Consensus 327 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~D~ 406 (468)
....+..+... ...+.....+. .................+.. .+.. .......+.+|++|+|+++|..|.
T Consensus 153 ---~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~l~~i~~P~lv~~~~~~~ 222 (276)
T 2wj6_A 153 ---THGLFDVWLDG--HDEKRVRHHLL-EEMADYGYDCWGRSGRVIED-AYGR---NGSPMQMMANLTKTRPIRHIFSQP 222 (276)
T ss_dssp ---HHHHHHHHHTT--BCCHHHHHHHH-TTTTTCCHHHHHHHHHHHHH-HHHH---HCCHHHHHHTCSSCCCEEEEECCS
T ss_pred ---HHHHHHHhhcc--cchHHHHHHHH-HHhhhcchhhhhhccchhHH-HHhh---ccchhhHHhhcCCCceEEEEecCc
Confidence 00011111110 01222222211 11111111111110000000 0000 000123567899999999874333
Q ss_pred cCC--HHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 407 ICP--PEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 407 ivp--~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
..+ ....+.+.+.+|++ +++++ |++||+.|.| +|++|++.|.+||++.
T Consensus 223 ~~~~~~~~~~~~~~~~p~a--~~~~i--~~~gH~~~~e------~P~~~~~~i~~Fl~~~ 272 (276)
T 2wj6_A 223 TEPEYEKINSDFAEQHPWF--SYAKL--GGPTHFPAID------VPDRAAVHIREFATAI 272 (276)
T ss_dssp CSHHHHHHHHHHHHHCTTE--EEEEC--CCSSSCHHHH------SHHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHhhCCCe--EEEEe--CCCCCccccc------CHHHHHHHHHHHHhhc
Confidence 222 34567788899976 88888 9999999998 9999999999999764
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 | Back alignment and structure |
|---|
Probab=99.72 E-value=4.7e-17 Score=155.40 Aligned_cols=242 Identities=10% Similarity=0.080 Sum_probs=130.0
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|++.+-...++.++..|+ ..||+|+++|+.|++..... ..+++++++ +|+.++++.+.
T Consensus 19 vvllHG~~~~~~~w~~~~~~L~---~~~~~vi~~Dl~GhG~S~~~--------------~~~~~~~~a-~~l~~~l~~l~ 80 (264)
T 1r3d_A 19 VVLVHGLLGSGADWQPVLSHLA---RTQCAALTLDLPGHGTNPER--------------HCDNFAEAV-EMIEQTVQAHV 80 (264)
T ss_dssp EEEECCTTCCGGGGHHHHHHHT---TSSCEEEEECCTTCSSCC---------------------CHHH-HHHHHHHHTTC
T ss_pred EEEEcCCCCCHHHHHHHHHHhc---ccCceEEEecCCCCCCCCCC--------------CccCHHHHH-HHHHHHHHHhC
Confidence 4454555555555666666665 68999999999999763110 012456665 77777776653
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHH---HHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcch
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYA---MLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPL 313 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~---~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (468)
. ...+++++||||||.+++. +|.++ |++|+++|++++................ .
T Consensus 81 ~----~~~p~~lvGhSmGG~va~~~~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~~---~----------- 137 (264)
T 1r3d_A 81 T----SEVPVILVGYSLGGRLIMHGLAQGAFS-----RLNLRGAIIEGGHFGLQENEEKAARWQH---D----------- 137 (264)
T ss_dssp C----TTSEEEEEEETHHHHHHHHHHHHTTTT-----TSEEEEEEEESCCCCCCSHHHHHHHHHH---H-----------
T ss_pred c----CCCceEEEEECHhHHHHHHHHHHHhhC-----ccccceEEEecCCCCCCChhhhhhhhcc---c-----------
Confidence 2 2113999999999999999 77776 8899999999875433221110000000 0
Q ss_pred HhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCcc
Q 012210 314 GALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKC 393 (468)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I 393 (468)
......+.. .........|...... ....+.....+....... .......+.... .+. ...+....+.+|
T Consensus 138 ~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~---~~~~~~~~l~~i 207 (264)
T 1r3d_A 138 QQWAQRFSQ-QPIEHVLSDWYQQAVF--SSLNHEQRQTLIAQRSAN-LGSSVAHMLLAT---SLA---KQPYLLPALQAL 207 (264)
T ss_dssp HHHHHHHHH-SCHHHHHHHHTTSGGG--TTCCHHHHHHHHHHHTTS-CHHHHHHHHHHT---CGG---GCCCCHHHHHTC
T ss_pred HHHHHHhcc-ccHHHHHHHHhhhhhh--hccCHHHHHHHHHHHhhc-chHHHHHHHHhh---hhc---cCccHHHHHHhc
Confidence 000000000 0000000011100000 001122222211111111 111111111111 000 011234567889
Q ss_pred CccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 394 NIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 394 ~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
++|+|+|+|++|..++ .+.+.++ . +++++ +++||+.|.| .|+++.+.|.+|++++.
T Consensus 208 ~~P~lii~G~~D~~~~-----~~~~~~~-~--~~~~i--~~~gH~~~~e------~p~~~~~~i~~fl~~~~ 263 (264)
T 1r3d_A 208 KLPIHYVCGEQDSKFQ-----QLAESSG-L--SYSQV--AQAGHNVHHE------QPQAFAKIVQAMIHSII 263 (264)
T ss_dssp SSCEEEEEETTCHHHH-----HHHHHHC-S--EEEEE--TTCCSCHHHH------CHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEEECCCchHH-----HHHHHhC-C--cEEEc--CCCCCchhhc------CHHHHHHHHHHHHHHhc
Confidence 9999999999998652 2333333 3 67777 9999999998 89999999999998763
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} | Back alignment and structure |
|---|
Probab=99.72 E-value=8.1e-17 Score=152.05 Aligned_cols=208 Identities=16% Similarity=0.182 Sum_probs=133.8
Q ss_pred hhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEE
Q 012210 171 RDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIG 250 (468)
Q Consensus 171 ~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvG 250 (468)
..+++.++ ..||.|+++|+.|++..... ..++++++++ +|+.++++++.. ++++++|
T Consensus 56 ~~~~~~l~---~~g~~v~~~d~~G~G~s~~~-------------~~~~~~~~~~-~d~~~~~~~l~~------~~~~l~G 112 (270)
T 3llc_A 56 LEMDDLAA---SLGVGAIRFDYSGHGASGGA-------------FRDGTISRWL-EEALAVLDHFKP------EKAILVG 112 (270)
T ss_dssp HHHHHHHH---HHTCEEEEECCTTSTTCCSC-------------GGGCCHHHHH-HHHHHHHHHHCC------SEEEEEE
T ss_pred HHHHHHHH---hCCCcEEEeccccCCCCCCc-------------cccccHHHHH-HHHHHHHHHhcc------CCeEEEE
Confidence 34667776 78999999999998663110 1234677876 999999998852 3999999
Q ss_pred EehhHHHHHHHHHh---cCCCCCc---ccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCC
Q 012210 251 HSMGGILLYAMLSR---CGFEGRE---SRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLS 324 (468)
Q Consensus 251 hS~GG~ia~~~a~~---~~~~~~p---~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (468)
|||||.+++.+|.+ + | ++|+++|++++........ ... ... ...
T Consensus 113 ~S~Gg~~a~~~a~~~~~~-----p~~~~~v~~~il~~~~~~~~~~~-----~~~--------~~~----~~~-------- 162 (270)
T 3llc_A 113 SSMGGWIALRLIQELKAR-----HDNPTQVSGMVLIAPAPDFTSDL-----IEP--------LLG----DRE-------- 162 (270)
T ss_dssp ETHHHHHHHHHHHHHHTC-----SCCSCEEEEEEEESCCTTHHHHT-----TGG--------GCC----HHH--------
T ss_pred eChHHHHHHHHHHHHHhc-----cccccccceeEEecCcccchhhh-----hhh--------hhh----hhh--------
Confidence 99999999999998 7 7 8999999999865432110 000 000 000
Q ss_pred CCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecCC
Q 012210 325 SSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQ 404 (468)
Q Consensus 325 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~ 404 (468)
...+......... ..+...+......+...... ......+.++++|+|+++|++
T Consensus 163 -----~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~P~l~i~g~~ 216 (270)
T 3llc_A 163 -----RAELAENGYFEEV------------SEYSPEPNIFTRALMEDGRA---------NRVMAGMIDTGCPVHILQGMA 216 (270)
T ss_dssp -----HHHHHHHSEEEEC------------CTTCSSCEEEEHHHHHHHHH---------TCCTTSCCCCCSCEEEEEETT
T ss_pred -----hhhhhccCcccCh------------hhcccchhHHHHHHHhhhhh---------hhhhhhhhcCCCCEEEEecCC
Confidence 0000000000000 00000000000111111111 112356788999999999999
Q ss_pred CCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 405 DLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 405 D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
|.++|++.++++.+.+++...+++++ ++++|..+.+ +.++++.+.|.+||+++
T Consensus 217 D~~v~~~~~~~~~~~~~~~~~~~~~~--~~~gH~~~~~-----~~~~~~~~~i~~fl~~~ 269 (270)
T 3llc_A 217 DPDVPYQHALKLVEHLPADDVVLTLV--RDGDHRLSRP-----QDIDRMRNAIRAMIEPR 269 (270)
T ss_dssp CSSSCHHHHHHHHHTSCSSSEEEEEE--TTCCSSCCSH-----HHHHHHHHHHHHHHC--
T ss_pred CCCCCHHHHHHHHHhcCCCCeeEEEe--CCCccccccc-----ccHHHHHHHHHHHhcCC
Confidence 99999999999999999855688888 8899965432 37899999999999864
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=7.2e-17 Score=162.80 Aligned_cols=268 Identities=14% Similarity=0.138 Sum_probs=146.8
Q ss_pred ccccccccccccchhhHHHHHHhh-hhcCc---eEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNM-IEEGQ---LSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAM 232 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~-l~~Gy---~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i 232 (468)
++-.+++.+-...+..++..|+.- -..|| +|+++|+.|++.... . ..+. ....+++.+++ +|+.+++
T Consensus 55 vvllHG~~~~~~~~~~~~~~L~~~~~~~G~~~~~vi~~D~~G~G~S~~-----~-~~~~--~~~~~~~~~~~-~dl~~~l 125 (398)
T 2y6u_A 55 LVFLHGSGMSKVVWEYYLPRLVAADAEGNYAIDKVLLIDQVNHGDSAV-----R-NRGR--LGTNFNWIDGA-RDVLKIA 125 (398)
T ss_dssp EEEECCTTCCGGGGGGGGGGSCCCBTTTTEEEEEEEEECCTTSHHHHH-----H-TTTT--BCSCCCHHHHH-HHHHHHH
T ss_pred EEEEcCCCCcHHHHHHHHHHHHHhhhhcCcceeEEEEEcCCCCCCCCC-----C-Cccc--cCCCCCcchHH-HHHHHHH
Confidence 455444444444555555544400 02389 999999999865210 0 0010 11245777886 8999998
Q ss_pred HHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcc
Q 012210 233 EYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVP 312 (468)
Q Consensus 233 ~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (468)
+++....+....+++++||||||.+++.+|..+ |++|+++|++++...............+ . ......
T Consensus 126 ~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~~----~---~~~~~~ 193 (398)
T 2y6u_A 126 TCELGSIDSHPALNVVIGHSMGGFQALACDVLQ-----PNLFHLLILIEPVVITRKAIGAGRPGLP----P---DSPQIP 193 (398)
T ss_dssp HHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHC-----TTSCSEEEEESCCCSCCCCCSCCCTTCC----T---TCCCCC
T ss_pred HHhcccccccCCceEEEEEChhHHHHHHHHHhC-----chheeEEEEecccccccccccccccccc----c---cccccc
Confidence 876532222212499999999999999999997 8899999999987654210000000000 0 000000
Q ss_pred hHhHHHHhcCCC----CCchhHHHHHHHhhhccccCCHHHHHHHHhhccCC--------------CcHHHHHHHHHHHhc
Q 012210 313 LGALLTAAYPLS----SSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCT--------------IPAKLILQLTTAFRE 374 (468)
Q Consensus 313 ~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~ 374 (468)
..++..+.... .....+..++.... .....+++....+....... ..... ....+.
T Consensus 194 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~- 267 (398)
T 2y6u_A 194 -ENLYNSLRLKTCDHFANESEYVKYMRNGS-FFTNAHSQILQNIIDFERTKASGDDEDGGPVRTKMEQAQ---NLLCYM- 267 (398)
T ss_dssp -HHHHHHHHHTCCCEESSHHHHHHHHHHTS-TTTTSCHHHHHHHHHHHEEC--------CCEEESSCHHH---HHHTTS-
T ss_pred -hhhHHHhhhhccccCCCHHHHHHHhhcCc-ccccCCHHHHHHHHHhcCccccccccCCCceEecCCchh---hhhhhc-
Confidence 00010000000 00000111111000 00011233332222110000 00000 000000
Q ss_pred CcccccCCccccccccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHH
Q 012210 375 GGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVY 454 (468)
Q Consensus 375 ~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~ 454 (468)
.+ .....+....+.+|++|+|+|+|++|.++|++.++.+.+.+++. +++++ ++++|+.+.+ .|+++.
T Consensus 268 -~~--~~~~~~~~~~l~~i~~PvLii~G~~D~~~~~~~~~~l~~~~~~~--~~~~~--~~~gH~~~~e------~p~~~~ 334 (398)
T 2y6u_A 268 -NM--QTFAPFLISNVKFVRKRTIHIVGARSNWCPPQNQLFLQKTLQNY--HLDVI--PGGSHLVNVE------APDLVI 334 (398)
T ss_dssp -CG--GGTHHHHHHHGGGCCSEEEEEEETTCCSSCHHHHHHHHHHCSSE--EEEEE--TTCCTTHHHH------SHHHHH
T ss_pred -cc--ccchHHHHHhccccCCCEEEEEcCCCCCCCHHHHHHHHHhCCCc--eEEEe--CCCCccchhc------CHHHHH
Confidence 00 00011223567889999999999999999999999999999975 88888 9999999987 899999
Q ss_pred HHHHHHHhhc
Q 012210 455 PCIVQFLGRY 464 (468)
Q Consensus 455 ~~I~~FL~~~ 464 (468)
+.|.+||.++
T Consensus 335 ~~i~~fl~~~ 344 (398)
T 2y6u_A 335 ERINHHIHEF 344 (398)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999865
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A | Back alignment and structure |
|---|
Probab=99.71 E-value=1.7e-16 Score=152.84 Aligned_cols=260 Identities=13% Similarity=0.088 Sum_probs=143.5
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.+++.|-...+..++..|+ ++|.|+++|+.|++...... . .....+++++++ +|+.++++.+.
T Consensus 32 vv~lHG~~~~~~~~~~~~~~L~----~~~~vi~~D~~G~G~S~~~~-------~--~~~~~~~~~~~~-~~~~~~l~~l~ 97 (302)
T 1mj5_A 32 ILFQHGNPTSSYLWRNIMPHCA----GLGRLIACDLIGMGDSDKLD-------P--SGPERYAYAEHR-DYLDALWEALD 97 (302)
T ss_dssp EEEECCTTCCGGGGTTTGGGGT----TSSEEEEECCTTSTTSCCCS-------S--CSTTSSCHHHHH-HHHHHHHHHTT
T ss_pred EEEECCCCCchhhhHHHHHHhc----cCCeEEEEcCCCCCCCCCCC-------C--CCcccccHHHHH-HHHHHHHHHhC
Confidence 4444444444455555555554 56899999999987631110 0 000125677886 88888888764
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhH
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAL 316 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
. .++++++||||||.+++.+|.++ |++|+++|++++............... ........+. ..
T Consensus 98 ~-----~~~~~lvG~S~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~---~~~~~~~~~~---~~- 160 (302)
T 1mj5_A 98 L-----GDRVVLVVHDWGSALGFDWARRH-----RERVQGIAYMEAIAMPIEWADFPEQDR---DLFQAFRSQA---GE- 160 (302)
T ss_dssp C-----TTCEEEEEEHHHHHHHHHHHHHT-----GGGEEEEEEEEECCSCBCGGGSCGGGH---HHHHHHHSTT---HH-
T ss_pred C-----CceEEEEEECCccHHHHHHHHHC-----HHHHhheeeecccCCchhhhhhhHHHH---HHHHHHhccc---hh-
Confidence 3 03899999999999999999997 889999999998664321100000000 0000000000 00
Q ss_pred HHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCC-CcHHHHHHHHHHHhcCccc-cc-CCccccccccCcc
Q 012210 317 LTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCT-IPAKLILQLTTAFREGGLR-DR-GGKFFYKDHIHKC 393 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~l~~I 393 (468)
.... ....++..++... .......+.+..+....... ........+...+...... .. ....++...+.+|
T Consensus 161 --~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 234 (302)
T 1mj5_A 161 --ELVL--QDNVFVEQVLPGL--ILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSES 234 (302)
T ss_dssp --HHHT--TTCHHHHTHHHHT--SSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHTTC
T ss_pred --hhhc--ChHHHHHHHHHhc--CcccCCHHHHHHHHHHhhcccccccchHHHHHhccccccchhhHHHHHHHHhhhhcc
Confidence 0000 0001111111110 01112333333322221111 1111111111110000000 00 0011234567889
Q ss_pred CccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 394 NIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 394 ~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
++|+|+|+|++|.++|++.++.+.+.+++ +++++ +++|+.+.+ .|+++.+.|.+|+++..
T Consensus 235 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~---~~gH~~~~e------~p~~~~~~i~~fl~~~~ 294 (302)
T 1mj5_A 235 PIPKLFINAEPGALTTGRMRDFCRTWPNQ---TEITV---AGAHFIQED------SPDEIGAAIAAFVRRLR 294 (302)
T ss_dssp CSCEEEEEEEECSSSSHHHHHHHTTCSSE---EEEEE---EESSCGGGT------CHHHHHHHHHHHHHHHS
T ss_pred CCCeEEEEeCCCCCCChHHHHHHHHhcCC---ceEEe---cCcCccccc------CHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999886 55554 689999997 89999999999998764
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A | Back alignment and structure |
|---|
Probab=99.71 E-value=7.3e-17 Score=158.96 Aligned_cols=253 Identities=17% Similarity=0.180 Sum_probs=134.8
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.+++.+-...++.++..|+ ..|+|+++|+.|++..-.. ...+|++++++ +|+.++++.+.
T Consensus 46 vvllHG~~~~~~~w~~~~~~L~----~~~~via~Dl~GhG~S~~~------------~~~~~~~~~~a-~dl~~ll~~l~ 108 (318)
T 2psd_A 46 VIFLHGNATSSYLWRHVVPHIE----PVARCIIPDLIGMGKSGKS------------GNGSYRLLDHY-KYLTAWFELLN 108 (318)
T ss_dssp EEEECCTTCCGGGGTTTGGGTT----TTSEEEEECCTTSTTCCCC------------TTSCCSHHHHH-HHHHHHHTTSC
T ss_pred EEEECCCCCcHHHHHHHHHHhh----hcCeEEEEeCCCCCCCCCC------------CCCccCHHHHH-HHHHHHHHhcC
Confidence 3443444333334455555444 5689999999999763111 01135677776 88877777653
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCc----hhhHHhhcccCchhhhcCCCCcc
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSS----KSTLKLLLPLADPAQALNVPVVP 312 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 312 (468)
. ..+++||||||||.+++.+|.++ |++|+++|++++....... ......+.. +..+
T Consensus 109 ----~-~~~~~lvGhSmGg~ia~~~A~~~-----P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~-------~~~~--- 168 (318)
T 2psd_A 109 ----L-PKKIIFVGHDWGAALAFHYAYEH-----QDRIKAIVHMESVVDVIESWDEWPDIEEDIAL-------IKSE--- 168 (318)
T ss_dssp ----C-CSSEEEEEEEHHHHHHHHHHHHC-----TTSEEEEEEEEECCSCBSCCTTSCSCHHHHHH-------HHST---
T ss_pred ----C-CCCeEEEEEChhHHHHHHHHHhC-----hHhhheEEEeccccCCccchhhhhhHHHHHHH-------Hhcc---
Confidence 2 03899999999999999999998 8999999998764321100 000000000 0000
Q ss_pred hHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCC-CcHHHHHHHHHHHhc-C-cccccC-Ccccccc
Q 012210 313 LGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCT-IPAKLILQLTTAFRE-G-GLRDRG-GKFFYKD 388 (468)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~-~~~~~~-~~~~~~~ 388 (468)
....+ .. ....++..++.... ......+.+..+....... ........+...+.. . ...... ...++..
T Consensus 169 ~~~~~--~~---~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (318)
T 2psd_A 169 EGEKM--VL---ENNFFVETVLPSKI--MRKLEPEEFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDVVQIVRNYNA 241 (318)
T ss_dssp HHHHH--HT---TTCHHHHTHHHHTC--SSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHTCCBTTTSCHHHHHHHHHHHH
T ss_pred cchhh--hh---cchHHHHhhccccc--cccCCHHHHHHHHHhhcCccccccchhcccccccccccccchhHHHHHHHHH
Confidence 00000 00 00000001111000 0111222222222111110 000011111100000 0 000000 0001123
Q ss_pred ccCcc-CccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccC
Q 012210 389 HIHKC-NIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 466 (468)
Q Consensus 389 ~l~~I-~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~ 466 (468)
.+.+| ++|+|+|+|++| ++++ .++.+.+.+++. +++++ ++||+.|.| .|++|.+.|.+||++...
T Consensus 242 ~l~~i~~~P~Lvi~G~~D-~~~~-~~~~~~~~~~~~--~~~~i---~~gH~~~~e------~p~~~~~~i~~fl~~~~~ 307 (318)
T 2psd_A 242 YLRASDDLPKLFIESDPG-FFSN-AIVEGAKKFPNT--EFVKV---KGLHFLQED------APDEMGKYIKSFVERVLK 307 (318)
T ss_dssp HHHTCTTSCEEEEEEEEC-SSHH-HHHHHHTTSSSE--EEEEE---EESSSGGGT------CHHHHHHHHHHHHHHHHC
T ss_pred HhccccCCCeEEEEeccc-cCcH-HHHHHHHhCCCc--EEEEe---cCCCCCHhh------CHHHHHHHHHHHHHHhhc
Confidence 45678 999999999999 8888 889999999976 67776 469999998 899999999999987643
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 | Back alignment and structure |
|---|
Probab=99.70 E-value=2.2e-16 Score=150.48 Aligned_cols=171 Identities=18% Similarity=0.220 Sum_probs=132.8
Q ss_pred ccccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHH
Q 012210 155 SSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEY 234 (468)
Q Consensus 155 ~~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~ 234 (468)
..++-.|.+.|-...+..+++.|+ .+||.|+++|+.+++.. ..... .|+.+++++
T Consensus 55 p~vv~~HG~~~~~~~~~~~~~~l~---~~G~~v~~~d~~g~g~~---------------------~~~~~-~d~~~~~~~ 109 (262)
T 1jfr_A 55 GAVVISPGFTAYQSSIAWLGPRLA---SQGFVVFTIDTNTTLDQ---------------------PDSRG-RQLLSALDY 109 (262)
T ss_dssp EEEEEECCTTCCGGGTTTHHHHHH---TTTCEEEEECCSSTTCC---------------------HHHHH-HHHHHHHHH
T ss_pred CEEEEeCCcCCCchhHHHHHHHHH---hCCCEEEEeCCCCCCCC---------------------CchhH-HHHHHHHHH
Confidence 345665666666677788899998 89999999999887431 11222 677888888
Q ss_pred HHh----hcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCC
Q 012210 235 IRA----QSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPV 310 (468)
Q Consensus 235 l~~----~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (468)
+.. ....+..+++++||||||.+++.+|.++ ++ |+++|++++...
T Consensus 110 l~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-----p~-v~~~v~~~p~~~------------------------- 158 (262)
T 1jfr_A 110 LTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSR-----TS-LKAAIPLTGWNT------------------------- 158 (262)
T ss_dssp HHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHC-----TT-CSEEEEESCCCS-------------------------
T ss_pred HHhccccccccCcccEEEEEEChhHHHHHHHHhcC-----cc-ceEEEeecccCc-------------------------
Confidence 876 2222224899999999999999999985 44 999999765210
Q ss_pred cchHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCcccccccc
Q 012210 311 VPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHI 390 (468)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 390 (468)
...+
T Consensus 159 ----------------------------------------------------------------------------~~~~ 162 (262)
T 1jfr_A 159 ----------------------------------------------------------------------------DKTW 162 (262)
T ss_dssp ----------------------------------------------------------------------------CCCC
T ss_pred ----------------------------------------------------------------------------cccc
Confidence 1235
Q ss_pred CccCccEEEEecCCCCcCCHHH-HHHHHHhCCC-CceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 391 HKCNIPILAIAGDQDLICPPEA-VEETVKLLPE-DLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 391 ~~I~vPvLiI~G~~D~ivp~~~-~~~l~~~ip~-~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
.++++|+|+++|++|.+++++. ++++.+.+++ ..++++++ ++++|..+.+ .++++.+.|.+||+++.
T Consensus 163 ~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~H~~~~~------~~~~~~~~i~~fl~~~l 231 (262)
T 1jfr_A 163 PELRTPTLVVGADGDTVAPVATHSKPFYESLPGSLDKAYLEL--RGASHFTPNT------SDTTIAKYSISWLKRFI 231 (262)
T ss_dssp TTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCTTSCEEEEEE--TTCCTTGGGS------CCHHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEecCccccCCchhhHHHHHHHhhcCCCceEEEe--CCCCcCCccc------chHHHHHHHHHHHHHHh
Confidence 6689999999999999999998 9999999986 35677777 8999999987 77899999999998764
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} | Back alignment and structure |
|---|
Probab=99.70 E-value=7.9e-17 Score=156.75 Aligned_cols=262 Identities=15% Similarity=0.123 Sum_probs=135.1
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|++.+-...++.+...|+ .||+|+++|+.|++..-... ......+|+.+.++ +|+.++++.+.
T Consensus 28 ~vllHG~~~~~~~w~~~~~~l~----~~~~vi~~Dl~G~G~s~~~~--------~~~~~~~~~~~~~~-~~~~~~~~~l~ 94 (291)
T 3qyj_A 28 LLLLHGYPQTHVMWHKIAPLLA----NNFTVVATDLRGYGDSSRPA--------SVPHHINYSKRVMA-QDQVEVMSKLG 94 (291)
T ss_dssp EEEECCTTCCGGGGTTTHHHHT----TTSEEEEECCTTSTTSCCCC--------CCGGGGGGSHHHHH-HHHHHHHHHTT
T ss_pred EEEECCCCCCHHHHHHHHHHHh----CCCEEEEEcCCCCCCCCCCC--------CCccccccCHHHHH-HHHHHHHHHcC
Confidence 3333444444444555555554 69999999999997632110 00001235666776 88887777664
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhH
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAL 316 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
. ++++++||||||.+++.+|.++ |++|+++|++++.............+............+......+
T Consensus 95 ~------~~~~l~GhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (291)
T 3qyj_A 95 Y------EQFYVVGHDRGARVAHRLALDH-----PHRVKKLALLDIAPTHKMYRTTDQEFATAYYHWFFLIQPDNLPETL 163 (291)
T ss_dssp C------SSEEEEEETHHHHHHHHHHHHC-----TTTEEEEEEESCCCHHHHHHTCCHHHHHHTTHHHHTTCSTTHHHHH
T ss_pred C------CCEEEEEEChHHHHHHHHHHhC-----chhccEEEEECCCCcchhhhcchhhhhHHHHHHHHhccCCCchHHH
Confidence 3 2899999999999999999998 8999999999763211000000000000000000000000000000
Q ss_pred HHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCcc
Q 012210 317 LTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIP 396 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP 396 (468)
+. . ....++...+...........++.+..+..... .+. ........++.. .......+....+.+|+||
T Consensus 164 ~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~P 233 (291)
T 3qyj_A 164 IG----A-NPEYYLRKCLEKWGKDFSAFHPQALAEYIRCFS--QPA-VIHATCEDYRAA--ATIDLEHDELDMKQKISCP 233 (291)
T ss_dssp HH----T-CHHHHHHHHHHHHCSCGGGSCHHHHHHHHHHHT--SHH-HHHHHHHHHHHH--TTHHHHHHHTTTTCCBCSC
T ss_pred Hc----C-CHHHHHHHHHHhcCCCcccCCHHHHHHHHHHhc--CCC-cchhHHHHHHcc--cccchhhcchhcCCccccc
Confidence 00 0 000011111111111112234444444432221 111 111111111100 0000001112356889999
Q ss_pred EEEEecCCCCcCCH-HHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 397 ILAIAGDQDLICPP-EAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 397 vLiI~G~~D~ivp~-~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
+|+|+|++|.+.+. .....+.+..++. ...++ ++||+.|.| +|+++.+.|.+||.+
T Consensus 234 ~Lvi~G~~D~~~~~~~~~~~~~~~~~~~--~~~~~---~~GH~~~~E------~P~~v~~~i~~fL~~ 290 (291)
T 3qyj_A 234 VLVLWGEKGIIGRKYDVLATWRERAIDV--SGQSL---PCGHFLPEE------APEETYQAIYNFLTH 290 (291)
T ss_dssp EEEEEETTSSHHHHSCHHHHHHTTBSSE--EEEEE---SSSSCHHHH------SHHHHHHHHHHHHHC
T ss_pred eEEEecccccccchhhHHHHHHhhcCCc--ceeec---cCCCCchhh------CHHHHHHHHHHHHhc
Confidence 99999999977543 2345555555543 66776 489999998 999999999999975
|
| >2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=6.5e-17 Score=166.79 Aligned_cols=70 Identities=16% Similarity=0.152 Sum_probs=62.0
Q ss_pred cccccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCC-CCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 386 YKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEP-SGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 386 ~~~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~-~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
+...+.+|++|+|+|+|++|.++|++.++++.+.+++. +++++ + ++||+.+.+ .++++.+.|.+||+++
T Consensus 373 ~~~~l~~i~~PvLvi~G~~D~~~p~~~~~~l~~~~p~~--~~~~i--~~~~GH~~~~e------~p~~~~~~i~~fL~~~ 442 (444)
T 2vat_A 373 IPEALAMITQPALIICARSDGLYSFDEHVEMGRSIPNS--RLCVV--DTNEGHDFFVM------EADKVNDAVRGFLDQS 442 (444)
T ss_dssp HHHHHTTCCSCEEEEECTTCSSSCHHHHHHHHHHSTTE--EEEEC--CCSCGGGHHHH------THHHHHHHHHHHHTC-
T ss_pred HHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHHCCCc--EEEEe--CCCCCcchHHh------CHHHHHHHHHHHHHHh
Confidence 34568899999999999999999999999999999976 88888 8 899999997 8999999999999875
Q ss_pred c
Q 012210 465 D 465 (468)
Q Consensus 465 ~ 465 (468)
.
T Consensus 443 l 443 (444)
T 2vat_A 443 L 443 (444)
T ss_dssp -
T ss_pred c
Confidence 3
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.70 E-value=1.2e-16 Score=159.70 Aligned_cols=253 Identities=14% Similarity=0.043 Sum_probs=134.2
Q ss_pred hcCceEeccCccc-cccCCccchHHHh-hcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEE-EEEEehhHHHH
Q 012210 182 EEGQLSVSPQLFD-LQERLFSTIDDFQ-KQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLL-AIGHSMGGILL 258 (468)
Q Consensus 182 ~~Gy~viapdl~~-~~~~~~~~~~~l~-~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~-lvGhS~GG~ia 258 (468)
..||+|+++|+.| +++.-......-. ...+......+++.+++ +|+.++++.+. .. +++ ++||||||.++
T Consensus 96 ~~g~~vi~~D~~G~~g~s~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~l~~~l~~l~----~~--~~~~lvGhS~Gg~ia 168 (377)
T 2b61_A 96 TDRYFFISSNVLGGCKGTTGPSSINPQTGKPYGSQFPNIVVQDIV-KVQKALLEHLG----IS--HLKAIIGGSFGGMQA 168 (377)
T ss_dssp TTTCEEEEECCTTCSSSSSCTTSBCTTTSSBCGGGCCCCCHHHHH-HHHHHHHHHTT----CC--CEEEEEEETHHHHHH
T ss_pred cCCceEEEecCCCCCCCCCCCcccCccccccccccCCcccHHHHH-HHHHHHHHHcC----Cc--ceeEEEEEChhHHHH
Confidence 7899999999999 4442111000000 00000000035677776 77777776653 33 887 99999999999
Q ss_pred HHHHHhcCCCCCcccccceeEEccccccCCchhhHHhh-cc-c-Cchhhh---cCCCCcchH-----hHHHHhcCCCCCc
Q 012210 259 YAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLL-LP-L-ADPAQA---LNVPVVPLG-----ALLTAAYPLSSSP 327 (468)
Q Consensus 259 ~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~-~~-~-~~~~~~---~~~~~~~~~-----~~~~~~~~~~~~~ 327 (468)
+.+|.++ |++|+++|++++.............. .. + ..+... +.....+.. .++..... ...
T Consensus 169 ~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 241 (377)
T 2b61_A 169 NQWAIDY-----PDFMDNIVNLCSSIYFSAEAIGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTY--RTD 241 (377)
T ss_dssp HHHHHHS-----TTSEEEEEEESCCSSCCHHHHHHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHH--SCH
T ss_pred HHHHHHC-----chhhheeEEeccCccccccchhHHHHHHHHHhcCccccccchhccCCCchhhhHHHHhhhhcc--cCH
Confidence 9999997 88999999999875433211111000 00 0 000000 000000000 00000000 000
Q ss_pred hhHHHHHHHhhhccccC------CHHHHHHHHh----hccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccE
Q 012210 328 PYVFSWLNNLISAEDMM------HPELLKKLVL----NNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPI 397 (468)
Q Consensus 328 ~~~~~~l~~~~~~~~~~------~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPv 397 (468)
..+...+...... .......+.. ..........+......+...... ....++...+.+|++|+
T Consensus 242 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~i~~Pv 315 (377)
T 2b61_A 242 ----LQLAKAFGRATKSDGSFWGDYFQVESYLSYQGKKFLERFDANSYLHLLRALDMYDPS--LGYENVKEALSRIKARY 315 (377)
T ss_dssp ----HHHHHHTTTCBCTTCCTTSCCBHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHCCTT--TTSSCHHHHHTTCCSEE
T ss_pred ----HHHHHHhccccccccccccchHHHHHHHHhhhhhhccccChhHHHHHHHHHhccccc--cccchHHhhhhhcCCCE
Confidence 0000001000000 0001111110 011122222222222222111100 00112345678899999
Q ss_pred EEEecCCCCcCCH----HHHHHHHHhCCCCceeEEEecCC-CCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 398 LAIAGDQDLICPP----EAVEETVKLLPEDLVTYKVFGEP-SGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 398 LiI~G~~D~ivp~----~~~~~l~~~ip~~~~~~~v~~~~-~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
|+|+|++|.++|+ +.++.+.+.+++. +++++ + +++|+.+.+ .++++.+.|.+||+++
T Consensus 316 lii~G~~D~~~~~~~~~~~~~~l~~~~~~~--~~~~i--~~~~gH~~~~e------~p~~~~~~i~~fl~~~ 377 (377)
T 2b61_A 316 TLVSVTTDQLFKPIDLYKSKQLLEQSGVDL--HFYEF--PSDYGHDAFLV------DYDQFEKRIRDGLAGN 377 (377)
T ss_dssp EEEEETTCSSSCHHHHHHHHHHHHHTTCEE--EEEEE--CCTTGGGHHHH------CHHHHHHHHHHHHHTC
T ss_pred EEEecCCcccCCccchHHHHHHHHhcCCCc--eEEEe--CCCCCchhhhc------CHHHHHHHHHHHHhcC
Confidence 9999999999999 8899999999875 88888 8 899999997 8999999999999864
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 | Back alignment and structure |
|---|
Probab=99.70 E-value=1.6e-16 Score=154.79 Aligned_cols=80 Identities=13% Similarity=-0.022 Sum_probs=61.9
Q ss_pred hcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHH
Q 012210 182 EEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAM 261 (468)
Q Consensus 182 ~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~ 261 (468)
.+||+|+++|+.|++..-.. . . ...+++.+++ +|+.++++.+.. . +++++||||||.+++.+
T Consensus 58 ~~~~~vi~~D~~G~G~S~~~--~-----~----~~~~~~~~~~-~dl~~l~~~l~~----~--~~~lvGhSmGg~ia~~~ 119 (313)
T 1azw_A 58 PAKYRIVLFDQRGSGRSTPH--A-----D----LVDNTTWDLV-ADIERLRTHLGV----D--RWQVFGGSWGSTLALAY 119 (313)
T ss_dssp TTTEEEEEECCTTSTTSBST--T-----C----CTTCCHHHHH-HHHHHHHHHTTC----S--SEEEEEETHHHHHHHHH
T ss_pred cCcceEEEECCCCCcCCCCC--c-----c----cccccHHHHH-HHHHHHHHHhCC----C--ceEEEEECHHHHHHHHH
Confidence 57999999999999763110 0 0 1134667776 888887776643 2 89999999999999999
Q ss_pred HHhcCCCCCcccccceeEEcccc
Q 012210 262 LSRCGFEGRESRLAAIVTLASSL 284 (468)
Q Consensus 262 a~~~~~~~~p~~V~~lVllap~~ 284 (468)
|.++ |++|+++|++++..
T Consensus 120 a~~~-----p~~v~~lvl~~~~~ 137 (313)
T 1azw_A 120 AQTH-----PQQVTELVLRGIFL 137 (313)
T ss_dssp HHHC-----GGGEEEEEEESCCC
T ss_pred HHhC-----hhheeEEEEecccc
Confidence 9998 99999999997643
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=99.69 E-value=3.8e-16 Score=142.10 Aligned_cols=176 Identities=18% Similarity=0.188 Sum_probs=131.8
Q ss_pred ccccccccccccccchhh--HHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecC-ChhhHHhhhHHHH
Q 012210 155 SSLLERRQSSAIAIQIRD--LSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDW-DFDHYLEEDVPAA 231 (468)
Q Consensus 155 ~~ll~~~~~~G~~~~i~~--~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~-~~~~~~~~D~~a~ 231 (468)
+.++-.+...+-...+.. +++.|+ .+||.|+++|+.+++..+..... ..++ +..++. +++..+
T Consensus 28 ~~vv~~hG~~~~~~~~~~~~~~~~l~---~~G~~v~~~d~~g~g~s~~~~~~----------~~~~~~~~~~~-~~~~~~ 93 (207)
T 3bdi_A 28 RSIALFHGYSFTSMDWDKADLFNNYS---KIGYNVYAPDYPGFGRSASSEKY----------GIDRGDLKHAA-EFIRDY 93 (207)
T ss_dssp EEEEEECCTTCCGGGGGGGTHHHHHH---TTTEEEEEECCTTSTTSCCCTTT----------CCTTCCHHHHH-HHHHHH
T ss_pred CeEEEECCCCCCccccchHHHHHHHH---hCCCeEEEEcCCcccccCcccCC----------CCCcchHHHHH-HHHHHH
Confidence 345555666666677788 888898 89999999999988664210100 0123 344443 555555
Q ss_pred HHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCc
Q 012210 232 MEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVV 311 (468)
Q Consensus 232 i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (468)
++. .+.+ +++++|||+||.+++.++.++ +++++++|+++|+...
T Consensus 94 ~~~----~~~~--~i~l~G~S~Gg~~a~~~a~~~-----~~~~~~~v~~~~~~~~------------------------- 137 (207)
T 3bdi_A 94 LKA----NGVA--RSVIMGASMGGGMVIMTTLQY-----PDIVDGIIAVAPAWVE------------------------- 137 (207)
T ss_dssp HHH----TTCS--SEEEEEETHHHHHHHHHHHHC-----GGGEEEEEEESCCSCG-------------------------
T ss_pred HHH----cCCC--ceEEEEECccHHHHHHHHHhC-----chhheEEEEeCCcccc-------------------------
Confidence 444 3433 999999999999999999987 7889999999875210
Q ss_pred chHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccC
Q 012210 312 PLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIH 391 (468)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 391 (468)
.+ ...+.
T Consensus 138 --------------------~~-----------------------------------------------------~~~~~ 144 (207)
T 3bdi_A 138 --------------------SL-----------------------------------------------------KGDMK 144 (207)
T ss_dssp --------------------GG-----------------------------------------------------HHHHT
T ss_pred --------------------ch-----------------------------------------------------hHHHh
Confidence 00 01235
Q ss_pred ccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 392 KCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 392 ~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
++++|+++++|++|.+++++.++.+.+.+++. +++++ ++++|..+.+ .++++.+.|.+||++
T Consensus 145 ~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~--~~~~~--~~~~H~~~~~------~~~~~~~~i~~fl~~ 206 (207)
T 3bdi_A 145 KIRQKTLLVWGSKDHVVPIALSKEYASIISGS--RLEIV--EGSGHPVYIE------KPEEFVRITVDFLRN 206 (207)
T ss_dssp TCCSCEEEEEETTCTTTTHHHHHHHHHHSTTC--EEEEE--TTCCSCHHHH------SHHHHHHHHHHHHHT
T ss_pred hccCCEEEEEECCCCccchHHHHHHHHhcCCc--eEEEe--CCCCCCcccc------CHHHHHHHHHHHHhh
Confidence 57899999999999999999999999999876 78888 8899998886 789999999999975
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=6.5e-16 Score=143.71 Aligned_cols=199 Identities=19% Similarity=0.183 Sum_probs=141.1
Q ss_pred ccccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccc----hHHHhhcccceEeecCChhhHHhhhHHH
Q 012210 155 SSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFST----IDDFQKQLDLIVQYDWDFDHYLEEDVPA 230 (468)
Q Consensus 155 ~~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~----~~~l~~~~~~~~~~D~~~~~~~~~D~~a 230 (468)
+.++-.+++.|....+..+++.|+ .+||.|+++|+++++...... .......... ...+++..+. +|+.+
T Consensus 29 p~vv~~hG~~~~~~~~~~~~~~l~---~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~d~~~ 102 (236)
T 1zi8_A 29 PVIVIAQDIFGVNAFMRETVSWLV---DQGYAAVCPDLYARQAPGTALDPQDERQREQAYKL--WQAFDMEAGV-GDLEA 102 (236)
T ss_dssp EEEEEECCTTBSCHHHHHHHHHHH---HTTCEEEEECGGGGTSTTCBCCTTCHHHHHHHHHH--HHHCCHHHHH-HHHHH
T ss_pred CEEEEEcCCCCCCHHHHHHHHHHH---hCCcEEEeccccccCCCcccccccchhhhhhhhhh--hhccCcchhh-HHHHH
Confidence 446666777777888888999998 889999999999987542211 1111000000 0122455665 99999
Q ss_pred HHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCC
Q 012210 231 AMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPV 310 (468)
Q Consensus 231 ~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (468)
+++++..+.... ++++++||||||.+++.++..+ + +++++++.+....
T Consensus 103 ~~~~l~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~-----~--~~~~v~~~~~~~~------------------------ 150 (236)
T 1zi8_A 103 AIRYARHQPYSN-GKVGLVGYSLGGALAFLVASKG-----Y--VDRAVGYYGVGLE------------------------ 150 (236)
T ss_dssp HHHHHTSSTTEE-EEEEEEEETHHHHHHHHHHHHT-----C--SSEEEEESCSSGG------------------------
T ss_pred HHHHHHhccCCC-CCEEEEEECcCHHHHHHHhccC-----C--ccEEEEecCcccc------------------------
Confidence 999998765422 4999999999999999999985 4 8888876652110
Q ss_pred cchHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCcccccccc
Q 012210 311 VPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHI 390 (468)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 390 (468)
+....+
T Consensus 151 --------------------------------------------------------------------------~~~~~~ 156 (236)
T 1zi8_A 151 --------------------------------------------------------------------------KQLNKV 156 (236)
T ss_dssp --------------------------------------------------------------------------GCGGGG
T ss_pred --------------------------------------------------------------------------cchhhh
Confidence 011345
Q ss_pred CccCccEEEEecCCCCcCCHHHHHHHHHhCCC-CceeEEEecCCCCCCCCccccc--ccccchhhHHHHHHHHHhhccCC
Q 012210 391 HKCNIPILAIAGDQDLICPPEAVEETVKLLPE-DLVTYKVFGEPSGPHYAHYDLV--GGRMAVEQVYPCIVQFLGRYDSV 467 (468)
Q Consensus 391 ~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~-~~~~~~v~~~~~agH~~H~e~~--~~~~~pe~v~~~I~~FL~~~~~~ 467 (468)
.++++|+|+++|++|.++|++.++.+.+.+.. ...+++++ ++++|..+.+.- ......+++++.+.+||+++...
T Consensus 157 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~H~~~~~~~~~~~~~~~~~~~~~i~~fl~~~l~~ 234 (236)
T 1zi8_A 157 PEVKHPALFHMGGQDHFVPAPSRQLITEGFGANPLLQVHWY--EEAGHSFARTGSSGYVASAAALANERTLDFLVPLQSR 234 (236)
T ss_dssp GGCCSCEEEEEETTCTTSCHHHHHHHHHHHTTCTTEEEEEE--TTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGGGCC-
T ss_pred hhcCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCceEEEE--CCCCcccccCCCCccCHHHHHHHHHHHHHHHHHhcCC
Confidence 67899999999999999999999999998853 25678887 889997765410 11123467999999999988653
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.69 E-value=2.6e-16 Score=146.91 Aligned_cols=205 Identities=19% Similarity=0.233 Sum_probs=140.6
Q ss_pred ccccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHH
Q 012210 155 SSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEY 234 (468)
Q Consensus 155 ~~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~ 234 (468)
+.++-.+++.|....++.+++.|+ .+||.|+++|++++++.-... ...... .........+.... +|+.+++++
T Consensus 33 p~vv~~HG~~g~~~~~~~~~~~l~---~~G~~v~~~d~~g~g~~~~~~-~~~~~~-~~~~~~~~~~~~~~-~d~~~~~~~ 106 (241)
T 3f67_A 33 PIVIVVQEIFGVHEHIRDLCRRLA---QEGYLAIAPELYFRQGDPNEY-HDIPTL-FKELVSKVPDAQVL-ADLDHVASW 106 (241)
T ss_dssp EEEEEECCTTCSCHHHHHHHHHHH---HTTCEEEEECTTTTTCCGGGC-CSHHHH-HHHTGGGSCHHHHH-HHHHHHHHH
T ss_pred CEEEEEcCcCccCHHHHHHHHHHH---HCCcEEEEecccccCCCCCch-hhHHHH-HHHhhhcCCchhhH-HHHHHHHHH
Confidence 456776778888888999999999 999999999998875531111 100000 00001122455665 999999999
Q ss_pred HHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchH
Q 012210 235 IRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLG 314 (468)
Q Consensus 235 l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (468)
++.+. .+..+++++||||||.+++.++.++ +++.++|++.+........
T Consensus 107 l~~~~-~d~~~i~l~G~S~Gg~~a~~~a~~~------~~~~~~v~~~~~~~~~~~~------------------------ 155 (241)
T 3f67_A 107 AARHG-GDAHRLLITGFCWGGRITWLYAAHN------PQLKAAVAWYGKLVGEKSL------------------------ 155 (241)
T ss_dssp HHTTT-EEEEEEEEEEETHHHHHHHHHHTTC------TTCCEEEEESCCCSCCCCS------------------------
T ss_pred HHhcc-CCCCeEEEEEEcccHHHHHHHHhhC------cCcceEEEEeccccCCCcc------------------------
Confidence 98774 2234899999999999999999884 3488888766542211000
Q ss_pred hHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccC
Q 012210 315 ALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCN 394 (468)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~ 394 (468)
... .+....+.+++
T Consensus 156 ------------------------------------------~~~------------------------~~~~~~~~~~~ 169 (241)
T 3f67_A 156 ------------------------------------------NSP------------------------KHPVDIAVDLN 169 (241)
T ss_dssp ------------------------------------------SSC------------------------CCHHHHGGGCC
T ss_pred ------------------------------------------CCc------------------------cCHHHhhhhcC
Confidence 000 00012346678
Q ss_pred ccEEEEecCCCCcCCHHHHHHHHHhCCC--CceeEEEecCCCCCCCCcccc--cccccchhhHHHHHHHHHhhc
Q 012210 395 IPILAIAGDQDLICPPEAVEETVKLLPE--DLVTYKVFGEPSGPHYAHYDL--VGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 395 vPvLiI~G~~D~ivp~~~~~~l~~~ip~--~~~~~~v~~~~~agH~~H~e~--~~~~~~pe~v~~~I~~FL~~~ 464 (468)
+|+|+++|++|.++|++.++.+.+.+.. ..++++++ ++++|..+.+. .....+.+++++.+.+||++|
T Consensus 170 ~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~H~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 241 (241)
T 3f67_A 170 APVLGLYGAKDASIPQDTVETMRQALRAANATAEIVVY--PEADHAFNADYRASYHEESAKDGWQRMLAWFAQY 241 (241)
T ss_dssp SCEEEEEETTCTTSCHHHHHHHHHHHHHTTCSEEEEEE--TTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHTTC
T ss_pred CCEEEEEecCCCCCCHHHHHHHHHHHHHcCCCcEEEEE--CCCCcceecCCCCCCCHHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999888742 34578887 88999776431 122235678999999999875
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A | Back alignment and structure |
|---|
Probab=99.52 E-value=1.9e-18 Score=166.03 Aligned_cols=264 Identities=13% Similarity=0.014 Sum_probs=138.2
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|++.|-...+..++..|+ +||.|+++|+.|++........ .....+++.+++ +|+.++++++.
T Consensus 28 vv~lHG~~~~~~~~~~~~~~l~----~g~~v~~~D~~G~G~s~~~~~~--------~~~~~~~~~~~~-~~l~~~l~~l~ 94 (304)
T 3b12_A 28 LLLLHGFPQNLHMWARVAPLLA----NEYTVVCADLRGYGGSSKPVGA--------PDHANYSFRAMA-SDQRELMRTLG 94 (304)
Confidence 4443444444444555555554 7999999999998763211000 001234666776 89999888875
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhH
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAL 316 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
.. +++++||||||.+++.+|.++ |++|+++|+++++.........................+. .+
T Consensus 95 ~~------~~~lvG~S~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 159 (304)
T 3b12_A 95 FE------RFHLVGHARGGRTGHRMALDH-----PDSVLSLAVLDIIPTYVMFEEVDRFVARAYWHWYFLQQPA----PY 159 (304)
Confidence 43 899999999999999999987 8899999999986553321110000000000000000000 00
Q ss_pred HHHhcCCCCCchhHHH-HHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCc
Q 012210 317 LTAAYPLSSSPPYVFS-WLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNI 395 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~v 395 (468)
...+.. .....++.. ++..........+++....+...................... ..........+.+|+|
T Consensus 160 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~i~~ 233 (304)
T 3b12_A 160 PEKVIG-ADPDTFYEGCLFGWGATGADGFDPEQLEEYRKQWRDPAAIHGSCCDYRAGGT-----IDFELDHGDLGRQVQC 233 (304)
Confidence 000000 000001111 111111111111111111111100000000000000000000 0000001112788999
Q ss_pred cEEEEecCCCC-cCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 396 PILAIAGDQDL-ICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 396 PvLiI~G~~D~-ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
|+|+|+|++|. +++....+.+.+.+++. +++++ ++||+.|.+ .|+++.+.|.+||+++.
T Consensus 234 P~lii~G~~D~~~~~~~~~~~~~~~~~~~--~~~~i---~~gH~~~~e------~p~~~~~~i~~fl~~~~ 293 (304)
T 3b12_A 234 PALVFSGSAGLMHSLFEMQVVWAPRLANM--RFASL---PGGHFFVDR------FPDDTARILREFLSDAR 293 (304)
Confidence 99999999995 45666777778888865 66665 789999997 89999999999998764
|
| >1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.68 E-value=1.2e-16 Score=155.13 Aligned_cols=235 Identities=17% Similarity=0.158 Sum_probs=133.7
Q ss_pred ccccccccccccchhhHHHHHHhhhhc--CceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEE--GQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEY 234 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~--Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~ 234 (468)
++-.|++.|-...+..+++.|+ .+ ||+|+++|+.|++..... ..++. +|+.+.+..
T Consensus 39 vvllHG~~~~~~~~~~~~~~L~---~~~~g~~vi~~D~~G~G~s~~~--------------~~~~~-----~~~~~~l~~ 96 (302)
T 1pja_A 39 VIVVHGLFDSSYSFRHLLEYIN---ETHPGTVVTVLDLFDGRESLRP--------------LWEQV-----QGFREAVVP 96 (302)
T ss_dssp EEEECCTTCCGGGGHHHHHHHH---HHSTTCCEEECCSSCSGGGGSC--------------HHHHH-----HHHHHHHHH
T ss_pred EEEECCCCCChhHHHHHHHHHH---hcCCCcEEEEeccCCCccchhh--------------HHHHH-----HHHHHHHHH
Confidence 4554666666667788888888 77 999999999998652110 00122 444444444
Q ss_pred HHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcc-cccceeEEccccccCCch-hhHHhhcccCchhhhcCCCCcc
Q 012210 235 IRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRES-RLAAIVTLASSLDYTSSK-STLKLLLPLADPAQALNVPVVP 312 (468)
Q Consensus 235 l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~-~V~~lVllap~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 312 (468)
+.... . ++++++||||||.+++.+|.++ |+ +|+++|+++++....... ....... +...
T Consensus 97 ~~~~~-~--~~~~lvGhS~Gg~ia~~~a~~~-----p~~~v~~lvl~~~~~~~~~~~~~~~~~~~-----------~~~~ 157 (302)
T 1pja_A 97 IMAKA-P--QGVHLICYSQGGLVCRALLSVM-----DDHNVDSFISLSSPQMGQYGDTDYLKWLF-----------PTSM 157 (302)
T ss_dssp HHHHC-T--TCEEEEEETHHHHHHHHHHHHC-----TTCCEEEEEEESCCTTCBCSCCHHHHHHC-----------TTCC
T ss_pred HhhcC-C--CcEEEEEECHHHHHHHHHHHhc-----CccccCEEEEECCCcccccccchhhhhHH-----------HHHH
Confidence 44433 2 3999999999999999999997 77 799999999866432211 0100000 0000
Q ss_pred hHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCc
Q 012210 313 LGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHK 392 (468)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 392 (468)
........+.... ..........++.....+... ..+...+... .......++...+.+
T Consensus 158 ~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~--~~~~~~~~~~~~l~~ 216 (302)
T 1pja_A 158 RSNLYRICYSPWG---------QEFSICNYWHDPHHDDLYLNA----------SSFLALINGE--RDHPNATVWRKNFLR 216 (302)
T ss_dssp HHHHHHHHTSTTG---------GGSTGGGGBCCTTCHHHHHHH----------CSSHHHHTTS--SCCTTHHHHHHHHTT
T ss_pred HHHHhhccchHHH---------HHhhhhhcccChhhhhhhhcc----------chHHHHhhcC--CccccchhHHHHHhc
Confidence 0000000000000 000000000000000000000 0001111100 000011224567888
Q ss_pred cCccEEEEecCCCCcCCHHHHHHHHHhCCC-------------------------CceeEEEecCCCCCCCCcccccccc
Q 012210 393 CNIPILAIAGDQDLICPPEAVEETVKLLPE-------------------------DLVTYKVFGEPSGPHYAHYDLVGGR 447 (468)
Q Consensus 393 I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~-------------------------~~~~~~v~~~~~agH~~H~e~~~~~ 447 (468)
|+ |+|+|+|++|.++|++.++.+.+.+++ ...+++++ +++||+.|.+
T Consensus 217 i~-P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i--~~~gH~~~~e----- 288 (302)
T 1pja_A 217 VG-HLVLIGGPDDGVITPWQSSFFGFYDANETVLEMEEQLVYLRDSFGLKTLLARGAIVRCPM--AGISHTAWHS----- 288 (302)
T ss_dssp CS-EEEEEECTTCSSSSSGGGGGTCEECTTCCEECGGGSHHHHTTTTSHHHHHHTTCEEEEEC--SSCCTTTTTS-----
T ss_pred cC-cEEEEEeCCCCccchhHhhHhhhcCCcccccchhhhhhhhhhhhchhhHhhcCCeEEEEe--cCcccccccc-----
Confidence 99 999999999999999988887666654 11578887 9999999998
Q ss_pred cchhhHHHHHHHHHh
Q 012210 448 MAVEQVYPCIVQFLG 462 (468)
Q Consensus 448 ~~pe~v~~~I~~FL~ 462 (468)
.|+++.+.|.+||+
T Consensus 289 -~p~~~~~~i~~fl~ 302 (302)
T 1pja_A 289 -NRTLYETCIEPWLS 302 (302)
T ss_dssp -CHHHHHHHTGGGCC
T ss_pred -CHHHHHHHHHHhcC
Confidence 89999999999874
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=99.67 E-value=3.6e-16 Score=143.80 Aligned_cols=183 Identities=16% Similarity=0.195 Sum_probs=132.3
Q ss_pred cccccccccccc--chhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHH
Q 012210 157 LLERRQSSAIAI--QIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEY 234 (468)
Q Consensus 157 ll~~~~~~G~~~--~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~ 234 (468)
++-.+.+.|... ....+++.|+ .+||.|+++|+.+++.... . .. .....++++++. +|+.+++++
T Consensus 38 vv~~hG~~~~~~~~~~~~~~~~l~---~~G~~v~~~d~~g~g~s~~---~-~~-----~~~~~~~~~~~~-~d~~~~i~~ 104 (223)
T 2o2g_A 38 VLFAHGSGSSRYSPRNRYVAEVLQ---QAGLATLLIDLLTQEEEEI---D-LR-----TRHLRFDIGLLA-SRLVGATDW 104 (223)
T ss_dssp EEEECCTTCCTTCHHHHHHHHHHH---HHTCEEEEECSSCHHHHHH---H-HH-----HCSSTTCHHHHH-HHHHHHHHH
T ss_pred EEEecCCCCCCCccchHHHHHHHH---HCCCEEEEEcCCCcCCCCc---c-ch-----hhcccCcHHHHH-HHHHHHHHH
Confidence 444344333333 3456788888 8899999999998754210 0 00 001234677776 999999999
Q ss_pred HHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchH
Q 012210 235 IRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLG 314 (468)
Q Consensus 235 l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (468)
+......+..+++++|||+||.+++.++..+ +++++++|++++.....
T Consensus 105 l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-----~~~v~~~v~~~~~~~~~--------------------------- 152 (223)
T 2o2g_A 105 LTHNPDTQHLKVGYFGASTGGGAALVAAAER-----PETVQAVVSRGGRPDLA--------------------------- 152 (223)
T ss_dssp HHHCTTTTTSEEEEEEETHHHHHHHHHHHHC-----TTTEEEEEEESCCGGGC---------------------------
T ss_pred HHhCcCCCCCcEEEEEeCccHHHHHHHHHhC-----CCceEEEEEeCCCCCcC---------------------------
Confidence 9987655556999999999999999999987 77899999988632100
Q ss_pred hHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccC
Q 012210 315 ALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCN 394 (468)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~ 394 (468)
...+.+++
T Consensus 153 ------------------------------------------------------------------------~~~~~~~~ 160 (223)
T 2o2g_A 153 ------------------------------------------------------------------------PSALPHVK 160 (223)
T ss_dssp ------------------------------------------------------------------------TTTGGGCC
T ss_pred ------------------------------------------------------------------------HHHHhcCC
Confidence 02345678
Q ss_pred ccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 395 IPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 395 vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
+|+|+++|++|.++|.+..+.+.+..++ .+++++ ++++|..+.+ +.++++.+.|.+||+++.
T Consensus 161 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~--~~~~H~~~~~-----~~~~~~~~~i~~fl~~~l 222 (223)
T 2o2g_A 161 APTLLIVGGYDLPVIAMNEDALEQLQTS--KRLVII--PRASHLFEEP-----GALTAVAQLASEWFMHYL 222 (223)
T ss_dssp SCEEEEEETTCHHHHHHHHHHHHHCCSS--EEEEEE--TTCCTTCCST-----THHHHHHHHHHHHHHHHC
T ss_pred CCEEEEEccccCCCCHHHHHHHHhhCCC--eEEEEe--CCCCcccCCh-----HHHHHHHHHHHHHHHHhc
Confidence 9999999999999986665555555444 478887 8889986552 367899999999999874
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.67 E-value=2.7e-15 Score=141.85 Aligned_cols=163 Identities=17% Similarity=0.286 Sum_probs=127.6
Q ss_pred hhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEE
Q 012210 170 IRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAI 249 (468)
Q Consensus 170 i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lv 249 (468)
+..+++.|+ .+||.|+++|+.+++.... ..+.....+ +|+.++++++..... +..+++++
T Consensus 68 ~~~~~~~l~---~~G~~v~~~d~~g~G~s~~--------------~~~~~~~~~--~d~~~~i~~l~~~~~-~~~~i~l~ 127 (249)
T 2i3d_A 68 VYQLFYLFQ---KRGFTTLRFNFRSIGRSQG--------------EFDHGAGEL--SDAASALDWVQSLHP-DSKSCWVA 127 (249)
T ss_dssp HHHHHHHHH---HTTCEEEEECCTTSTTCCS--------------CCCSSHHHH--HHHHHHHHHHHHHCT-TCCCEEEE
T ss_pred HHHHHHHHH---HCCCEEEEECCCCCCCCCC--------------CCCCccchH--HHHHHHHHHHHHhCC-CCCeEEEE
Confidence 467888888 8999999999998865211 012233343 899999999988743 33489999
Q ss_pred EEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCchh
Q 012210 250 GHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPY 329 (468)
Q Consensus 250 GhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (468)
||||||.+++.+|.++ |+ ++++|+++++.....
T Consensus 128 G~S~Gg~~a~~~a~~~-----p~-v~~~v~~~~~~~~~~----------------------------------------- 160 (249)
T 2i3d_A 128 GYSFGAWIGMQLLMRR-----PE-IEGFMSIAPQPNTYD----------------------------------------- 160 (249)
T ss_dssp EETHHHHHHHHHHHHC-----TT-EEEEEEESCCTTTSC-----------------------------------------
T ss_pred EECHHHHHHHHHHhcC-----CC-ccEEEEEcCchhhhh-----------------------------------------
Confidence 9999999999999985 55 999999987543100
Q ss_pred HHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecCCCCcCC
Q 012210 330 VFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICP 409 (468)
Q Consensus 330 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~D~ivp 409 (468)
...+.++++|+|+++|++|.++|
T Consensus 161 ---------------------------------------------------------~~~~~~~~~P~lii~G~~D~~~~ 183 (249)
T 2i3d_A 161 ---------------------------------------------------------FSFLAPCPSSGLIINGDADKVAP 183 (249)
T ss_dssp ---------------------------------------------------------CTTCTTCCSCEEEEEETTCSSSC
T ss_pred ---------------------------------------------------------hhhhcccCCCEEEEEcCCCCCCC
Confidence 02345688999999999999999
Q ss_pred HHHHHHHHHhCCCC---ceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 410 PEAVEETVKLLPED---LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 410 ~~~~~~l~~~ip~~---~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
++.++++.+.++.. ..+++++ ++++|..+ + .++++.+.|.+||+++.
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~--~g~~H~~~-~------~~~~~~~~i~~fl~~~l 233 (249)
T 2i3d_A 184 EKDVNGLVEKLKTQKGILITHRTL--PGANHFFN-G------KVDELMGECEDYLDRRL 233 (249)
T ss_dssp HHHHHHHHHHHTTSTTCCEEEEEE--TTCCTTCT-T------CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccCCceeEEEE--CCCCcccc-c------CHHHHHHHHHHHHHHhc
Confidence 99999999998842 4578887 88999887 4 78999999999998764
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.67 E-value=3e-15 Score=136.98 Aligned_cols=160 Identities=20% Similarity=0.288 Sum_probs=124.6
Q ss_pred ccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcE
Q 012210 167 AIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKL 246 (468)
Q Consensus 167 ~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v 246 (468)
+..++.+++.|+ .+||.|+++|+.+++..... .+ ...... +|+.++++++..+.+.. ++
T Consensus 49 ~~~~~~~~~~l~---~~g~~v~~~d~~g~g~s~~~--------------~~-~~~~~~-~d~~~~~~~l~~~~~~~--~i 107 (208)
T 3trd_A 49 NKVVTTLAKALD---ELGLKTVRFNFRGVGKSQGR--------------YD-NGVGEV-EDLKAVLRWVEHHWSQD--DI 107 (208)
T ss_dssp CHHHHHHHHHHH---HTTCEEEEECCTTSTTCCSC--------------CC-TTTHHH-HHHHHHHHHHHHHCTTC--EE
T ss_pred CchHHHHHHHHH---HCCCEEEEEecCCCCCCCCC--------------cc-chHHHH-HHHHHHHHHHHHhCCCC--eE
Confidence 344677888888 89999999999998653111 01 112333 99999999999886554 99
Q ss_pred EEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCC
Q 012210 247 LAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSS 326 (468)
Q Consensus 247 ~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (468)
+++||||||.+++.++ .+ + +++++|+++++....
T Consensus 108 ~l~G~S~Gg~~a~~~a-~~-----~-~v~~~v~~~~~~~~~--------------------------------------- 141 (208)
T 3trd_A 108 WLAGFSFGAYISAKVA-YD-----Q-KVAQLISVAPPVFYE--------------------------------------- 141 (208)
T ss_dssp EEEEETHHHHHHHHHH-HH-----S-CCSEEEEESCCTTSG---------------------------------------
T ss_pred EEEEeCHHHHHHHHHh-cc-----C-CccEEEEeccccccC---------------------------------------
Confidence 9999999999999999 53 4 899999998753100
Q ss_pred chhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecCCCC
Q 012210 327 PPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDL 406 (468)
Q Consensus 327 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~D~ 406 (468)
....+..+++|+|+++|++|.
T Consensus 142 -----------------------------------------------------------~~~~~~~~~~p~l~i~g~~D~ 162 (208)
T 3trd_A 142 -----------------------------------------------------------GFASLTQMASPWLIVQGDQDE 162 (208)
T ss_dssp -----------------------------------------------------------GGTTCCSCCSCEEEEEETTCS
T ss_pred -----------------------------------------------------------CchhhhhcCCCEEEEECCCCC
Confidence 002234568999999999999
Q ss_pred cCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 012210 407 ICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 462 (468)
Q Consensus 407 ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~ 462 (468)
++|++.++++.+.+++. .+++++ ++++|..+.+ .+++.+.|.+||+
T Consensus 163 ~~~~~~~~~~~~~~~~~-~~~~~~--~~~~H~~~~~-------~~~~~~~i~~fl~ 208 (208)
T 3trd_A 163 VVPFEQVKAFVNQISSP-VEFVVM--SGASHFFHGR-------LIELRELLVRNLA 208 (208)
T ss_dssp SSCHHHHHHHHHHSSSC-CEEEEE--TTCCSSCTTC-------HHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHccCc-eEEEEe--CCCCCccccc-------HHHHHHHHHHHhC
Confidence 99999999999999973 588888 8999988864 3888999999974
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=2.5e-16 Score=149.00 Aligned_cols=225 Identities=15% Similarity=0.130 Sum_probs=135.8
Q ss_pred cccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHH
Q 012210 156 SLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYI 235 (468)
Q Consensus 156 ~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l 235 (468)
.++-.|.+.|-...+..++..|+ .+|.|+++|+.|++.... . ...+++.+++ +|+.++++.+
T Consensus 22 ~vv~~HG~~~~~~~~~~~~~~l~----~~~~v~~~d~~G~G~s~~----------~---~~~~~~~~~~-~~~~~~l~~~ 83 (267)
T 3fla_A 22 RLVCLPHAGGSASFFFPLAKALA----PAVEVLAVQYPGRQDRRH----------E---PPVDSIGGLT-NRLLEVLRPF 83 (267)
T ss_dssp EEEEECCTTCCGGGGHHHHHHHT----TTEEEEEECCTTSGGGTT----------S---CCCCSHHHHH-HHHHHHTGGG
T ss_pred eEEEeCCCCCCchhHHHHHHHhc----cCcEEEEecCCCCCCCCC----------C---CCCcCHHHHH-HHHHHHHHhc
Confidence 34554566555566666776665 569999999999865211 0 1134677776 7777777766
Q ss_pred HhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCccc----ccceeEEccccccCCchhhHHhhcccCchhhhcCCCCc
Q 012210 236 RAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESR----LAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVV 311 (468)
Q Consensus 236 ~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~----V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (468)
+. ++++++||||||.+++.+|.++ +++ +.++|++++..+....... ....
T Consensus 84 ----~~--~~~~lvG~S~Gg~ia~~~a~~~-----~~~~~~~v~~lvl~~~~~~~~~~~~~---------------~~~~ 137 (267)
T 3fla_A 84 ----GD--RPLALFGHSMGAIIGYELALRM-----PEAGLPAPVHLFASGRRAPSRYRDDD---------------VRGA 137 (267)
T ss_dssp ----TT--SCEEEEEETHHHHHHHHHHHHT-----TTTTCCCCSEEEEESCCCTTCCCCSC---------------TTCC
T ss_pred ----CC--CceEEEEeChhHHHHHHHHHhh-----hhhccccccEEEECCCCccccccchh---------------hccc
Confidence 22 3899999999999999999997 554 8999998876543221100 0000
Q ss_pred chHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccC
Q 012210 312 PLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIH 391 (468)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 391 (468)
....+...+..... ...... .+++...... ..+......+.. +.. ....
T Consensus 138 ~~~~~~~~~~~~~~-------~~~~~~-----~~~~~~~~~~---------~~~~~~~~~~~~---------~~~-~~~~ 186 (267)
T 3fla_A 138 SDERLVAELRKLGG-------SDAAML-----ADPELLAMVL---------PAIRSDYRAVET---------YRH-EPGR 186 (267)
T ss_dssp CHHHHHHHHHHTCH-------HHHHHH-----HSHHHHHHHH---------HHHHHHHHHHHH---------CCC-CTTC
T ss_pred chHHHHHHHHHhcC-------cchhhc-----cCHHHHHHHH---------HHHHHHHHhhhc---------ccc-cccC
Confidence 00111111000000 000000 0111111100 000000111110 011 1226
Q ss_pred ccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 392 KCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 392 ~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
++++|+|+|+|++|.++|++.++.+.+.+++ ..+++++ ++ +|+.+.+ .++++.+.|.+||++..
T Consensus 187 ~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~--~g-gH~~~~~------~~~~~~~~i~~fl~~~~ 250 (267)
T 3fla_A 187 RVDCPVTVFTGDHDPRVSVGEARAWEEHTTG-PADLRVL--PG-GHFFLVD------QAAPMIATMTEKLAGPA 250 (267)
T ss_dssp CBSSCEEEEEETTCTTCCHHHHHGGGGGBSS-CEEEEEE--SS-STTHHHH------THHHHHHHHHHHTC---
T ss_pred cCCCCEEEEecCCCCCCCHHHHHHHHHhcCC-CceEEEe--cC-Cceeecc------CHHHHHHHHHHHhcccc
Confidence 8999999999999999999999999999997 4588888 77 9999987 89999999999998764
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.66 E-value=1.6e-16 Score=152.70 Aligned_cols=219 Identities=12% Similarity=0.129 Sum_probs=127.6
Q ss_pred hhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHH
Q 012210 179 NMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILL 258 (468)
Q Consensus 179 ~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia 258 (468)
..+.+||+|+++|+.|++..-. .....+++++++ +|+.++++.+. .+ +++++||||||.++
T Consensus 64 ~~L~~~~~vi~~D~~G~G~S~~------------~~~~~~~~~~~~-~~l~~~l~~~~----~~--~~~lvGhS~Gg~ia 124 (292)
T 3l80_A 64 DKLPDSIGILTIDAPNSGYSPV------------SNQANVGLRDWV-NAILMIFEHFK----FQ--SYLLCVHSIGGFAA 124 (292)
T ss_dssp TTSCTTSEEEEECCTTSTTSCC------------CCCTTCCHHHHH-HHHHHHHHHSC----CS--EEEEEEETTHHHHH
T ss_pred HHHhhcCeEEEEcCCCCCCCCC------------CCcccccHHHHH-HHHHHHHHHhC----CC--CeEEEEEchhHHHH
Confidence 3345799999999999976310 011235677876 88888877663 22 99999999999999
Q ss_pred HHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCC--ch-hHHHHHH
Q 012210 259 YAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSS--PP-YVFSWLN 335 (468)
Q Consensus 259 ~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~l~ 335 (468)
+.+|.++ |++|+++|+++|...... +..... ...+. ........... .. ++...+.
T Consensus 125 ~~~a~~~-----p~~v~~lvl~~~~~~~~~-------~~~~~~-------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 183 (292)
T 3l80_A 125 LQIMNQS-----SKACLGFIGLEPTTVMIY-------RAGFSS-------DLYPQ--LALRRQKLKTAADRLNYLKDLSR 183 (292)
T ss_dssp HHHHHHC-----SSEEEEEEEESCCCHHHH-------HHCTTS-------SSSHH--HHHHHHTCCSHHHHHHHHHHHHH
T ss_pred HHHHHhC-----chheeeEEEECCCCcchh-------hhcccc-------ccchh--HHHHHHHHhccCchhhhHhhccc
Confidence 9999998 889999999996543110 000000 00000 00000000000 00 0000111
Q ss_pred HhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCc----cccc--CCccccccccCccCccEEEEecCCCCcCC
Q 012210 336 NLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGG----LRDR--GGKFFYKDHIHKCNIPILAIAGDQDLICP 409 (468)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~l~~I~vPvLiI~G~~D~ivp 409 (468)
..+ .+...... ..........+.... +..+ ....++...+.+ ++|+|+|+|++|.+++
T Consensus 184 ~~~------~~~~~~~~---------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~-~~P~lii~g~~D~~~~ 247 (292)
T 3l80_A 184 SHF------SSQQFKQL---------WRGYDYCQRQLNDVQSLPDFKIRLALGEEDFKTGISE-KIPSIVFSESFREKEY 247 (292)
T ss_dssp HHS------CHHHHHHH---------HHHHHHHHHHHHTTTTSTTCCSSCCCCGGGGCCCCCT-TSCEEEEECGGGHHHH
T ss_pred ccc------CHHHHHHh---------HHHHHHHHHHHHhhhhccccchhhhhcchhhhhccCC-CCCEEEEEccCccccc
Confidence 100 11110000 000111111111111 1100 011122346667 9999999999999999
Q ss_pred HHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccC
Q 012210 410 PEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 466 (468)
Q Consensus 410 ~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~ 466 (468)
++ + .+.+.+++. + +++ ++++|+.|.+ .|+++.+.|.+||+++.+
T Consensus 248 ~~-~-~~~~~~~~~--~-~~~--~~~gH~~~~e------~p~~~~~~i~~fl~~~~~ 291 (292)
T 3l80_A 248 LE-S-EYLNKHTQT--K-LIL--CGQHHYLHWS------ETNSILEKVEQLLSNHEK 291 (292)
T ss_dssp HT-S-TTCCCCTTC--E-EEE--CCSSSCHHHH------CHHHHHHHHHHHHHTCTT
T ss_pred hH-H-HHhccCCCc--e-eee--CCCCCcchhh------CHHHHHHHHHHHHHhccc
Confidence 98 6 888888886 5 566 8999999998 899999999999998754
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.2e-15 Score=155.53 Aligned_cols=235 Identities=14% Similarity=0.082 Sum_probs=133.3
Q ss_pred ccccccchhhHHHHHH-hhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCC
Q 012210 163 SSAIAIQIRDLSQNLV-NMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKP 241 (468)
Q Consensus 163 ~~G~~~~i~~~a~~la-~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~ 241 (468)
.||.......+...+. .++..||.|+++|+.|++..- . ... .+.. ++. +|+.++++++....
T Consensus 165 ~HG~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~---~-----~~~-----~~~~-~~~-~d~~~~~~~l~~~~-- 227 (405)
T 3fnb_A 165 VGGGDTSREDLFYMLGYSGWEHDYNVLMVDLPGQGKNP---N-----QGL-----HFEV-DAR-AAISAILDWYQAPT-- 227 (405)
T ss_dssp ECCSSCCHHHHHHHTHHHHHHTTCEEEEECCTTSTTGG---G-----GTC-----CCCS-CTH-HHHHHHHHHCCCSS--
T ss_pred ECCCCCCHHHHHHHHHHHHHhCCcEEEEEcCCCCcCCC---C-----CCC-----CCCc-cHH-HHHHHHHHHHHhcC--
Confidence 4555444444422222 233799999999999986520 0 000 1112 333 88999999997753
Q ss_pred CCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhc
Q 012210 242 KDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAY 321 (468)
Q Consensus 242 ~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (468)
.+++++||||||.+++.+|..+ | +|+++|+++|..+.... ....... ....+..
T Consensus 228 --~~v~l~G~S~GG~~a~~~a~~~-----p-~v~~~v~~~p~~~~~~~---~~~~~~~-----~~~~p~~---------- 281 (405)
T 3fnb_A 228 --EKIAIAGFSGGGYFTAQAVEKD-----K-RIKAWIASTPIYDVAEV---FRISFST-----ALKAPKT---------- 281 (405)
T ss_dssp --SCEEEEEETTHHHHHHHHHTTC-----T-TCCEEEEESCCSCHHHH---HHHHCC-----------------------
T ss_pred --CCEEEEEEChhHHHHHHHHhcC-----c-CeEEEEEecCcCCHHHH---HHHhhhh-----hhhCcHH----------
Confidence 3899999999999999999885 5 89999999887654211 1000000 0000000
Q ss_pred CCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEe
Q 012210 322 PLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIA 401 (468)
Q Consensus 322 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~ 401 (468)
....+..............+...........+...+..+.... ....+.+|++|+|+|+
T Consensus 282 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~i~~PvLii~ 340 (405)
T 3fnb_A 282 --------ILKWGSKLVTSVNKVAEVNLNKYAWQFGQVDFITSVNEVLEQA-------------QIVDYNKIDVPSLFLV 340 (405)
T ss_dssp ------------------CCCHHHHHHHHHHHHHHTSSSHHHHHHHHHHHC-------------CCCCGGGCCSCEEEEE
T ss_pred --------HHHHHHHHhhccchhHHHHHHHhhhhcCCCCHHHHHHHHHHhh-------------cccCHhhCCCCEEEEe
Confidence 0000000000000000011111111111122222222222111 1123788999999999
Q ss_pred cCCCCcCCHHHHHHHHHhCCC--CceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccC
Q 012210 402 GDQDLICPPEAVEETVKLLPE--DLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 466 (468)
Q Consensus 402 G~~D~ivp~~~~~~l~~~ip~--~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~ 466 (468)
|++|.++|++.+..+++.+++ ..++++++ ++.+|.+|.- ..++++.+.+.|.+||+++..
T Consensus 341 G~~D~~v~~~~~~~l~~~l~~~~~~~~l~~~--~~~~h~gh~~---~~~~~~~~~~~i~~fL~~~l~ 402 (405)
T 3fnb_A 341 GAGEDSELMRQSQVLYDNFKQRGIDVTLRKF--SSESGADAHC---QVNNFRLMHYQVFEWLNHIFK 402 (405)
T ss_dssp ETTSCHHHHHHHHHHHHHHHHTTCCEEEEEE--CTTTTCCSGG---GGGGHHHHHHHHHHHHHHHHC
T ss_pred cCCCcCCChHHHHHHHHHhccCCCCceEEEE--cCCccchhcc---ccchHHHHHHHHHHHHHHHhC
Confidence 999999999999999999974 34577777 5655554432 124889999999999998753
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.9e-15 Score=148.10 Aligned_cols=171 Identities=18% Similarity=0.225 Sum_probs=133.0
Q ss_pred ccccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHH
Q 012210 155 SSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEY 234 (468)
Q Consensus 155 ~~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~ 234 (468)
..++-.+++.|....+..+++.|+ .+||.|+++|+.+++.. ..... +|+.+++++
T Consensus 97 p~vv~~HG~~~~~~~~~~~~~~la---~~G~~vv~~d~~g~g~s---------------------~~~~~-~d~~~~~~~ 151 (306)
T 3vis_A 97 GAIAISPGYTGTQSSIAWLGERIA---SHGFVVIAIDTNTTLDQ---------------------PDSRA-RQLNAALDY 151 (306)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHHH---TTTEEEEEECCSSTTCC---------------------HHHHH-HHHHHHHHH
T ss_pred CEEEEeCCCcCCHHHHHHHHHHHH---hCCCEEEEecCCCCCCC---------------------cchHH-HHHHHHHHH
Confidence 335555666666677788888888 89999999999887541 11222 677788888
Q ss_pred HHhh------cCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCC
Q 012210 235 IRAQ------SKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNV 308 (468)
Q Consensus 235 l~~~------~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (468)
+... ...+.++++++||||||.+++.++..+ | +++++|++++...
T Consensus 152 l~~~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~-----p-~v~~~v~~~~~~~----------------------- 202 (306)
T 3vis_A 152 MLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQR-----P-DLKAAIPLTPWHL----------------------- 202 (306)
T ss_dssp HHHTSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHC-----T-TCSEEEEESCCCS-----------------------
T ss_pred HHhhcchhhhccCCcccEEEEEEChhHHHHHHHHhhC-----C-CeeEEEEeccccC-----------------------
Confidence 8775 333335899999999999999999884 4 4999999876211
Q ss_pred CCcchHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCcccccc
Q 012210 309 PVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKD 388 (468)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (468)
..
T Consensus 203 ------------------------------------------------------------------------------~~ 204 (306)
T 3vis_A 203 ------------------------------------------------------------------------------NK 204 (306)
T ss_dssp ------------------------------------------------------------------------------CC
T ss_pred ------------------------------------------------------------------------------cc
Confidence 02
Q ss_pred ccCccCccEEEEecCCCCcCCHH-HHHHHHHhCCCC-ceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 389 HIHKCNIPILAIAGDQDLICPPE-AVEETVKLLPED-LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 389 ~l~~I~vPvLiI~G~~D~ivp~~-~~~~l~~~ip~~-~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
.+.++++|+|+++|++|.++|++ ..+.+++.+++. .++++++ ++++|..+.+ .++++.+.+.+||+++.
T Consensus 205 ~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~l~~~~~~~~~~~--~g~gH~~~~~------~~~~~~~~i~~fl~~~l 275 (306)
T 3vis_A 205 SWRDITVPTLIIGAEYDTIASVTLHSKPFYNSIPSPTDKAYLEL--DGASHFAPNI------TNKTIGMYSVAWLKRFV 275 (306)
T ss_dssp CCTTCCSCEEEEEETTCSSSCTTTTHHHHHHTCCTTSCEEEEEE--TTCCTTGGGS------CCHHHHHHHHHHHHHHH
T ss_pred ccccCCCCEEEEecCCCcccCcchhHHHHHHHhccCCCceEEEE--CCCCccchhh------chhHHHHHHHHHHHHHc
Confidence 34668899999999999999998 699999999875 4667777 8999999887 77999999999999864
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.65 E-value=9.6e-16 Score=152.17 Aligned_cols=96 Identities=15% Similarity=0.255 Sum_probs=73.0
Q ss_pred hHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEE
Q 012210 172 DLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGH 251 (468)
Q Consensus 172 ~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGh 251 (468)
.+++.|+ .+||.|+++|+.|++.........+ +. ..++++.+++ +|+.++++++..+.+.. +++++||
T Consensus 84 ~~~~~l~---~~g~~v~~~d~~G~G~s~~~~~~~~---~~---~~~~~~~~~~-~d~~~~~~~l~~~~~~~--~~~l~G~ 151 (354)
T 2rau_A 84 SIVLYLA---RNGFNVYTIDYRTHYVPPFLKDRQL---SF---TANWGWSTWI-SDIKEVVSFIKRDSGQE--RIYLAGE 151 (354)
T ss_dssp CHHHHHH---HTTEEEEEEECGGGGCCTTCCGGGG---GG---GTTCSHHHHH-HHHHHHHHHHHHHHCCS--SEEEEEE
T ss_pred hHHHHHH---hCCCEEEEecCCCCCCCCccccccc---cc---ccCCcHHHHH-HHHHHHHHHHHHhcCCc--eEEEEEE
Confidence 7888888 8899999999999876422111111 00 0145778887 99999999998876654 9999999
Q ss_pred ehhHHHHHHHHHhcCCCCCcccccceeEEccc
Q 012210 252 SMGGILLYAMLSRCGFEGRESRLAAIVTLASS 283 (468)
Q Consensus 252 S~GG~ia~~~a~~~~~~~~p~~V~~lVllap~ 283 (468)
||||.+++.+|.++. |++|+++|++++.
T Consensus 152 S~Gg~~a~~~a~~~~----p~~v~~lvl~~~~ 179 (354)
T 2rau_A 152 SFGGIAALNYSSLYW----KNDIKGLILLDGG 179 (354)
T ss_dssp THHHHHHHHHHHHHH----HHHEEEEEEESCS
T ss_pred CHhHHHHHHHHHhcC----ccccceEEEeccc
Confidence 999999999998731 4579999999654
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.65 E-value=2.8e-15 Score=136.07 Aligned_cols=163 Identities=16% Similarity=0.126 Sum_probs=111.0
Q ss_pred hhh-HHHHHHhhhhc-CceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEE
Q 012210 170 IRD-LSQNLVNMIEE-GQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLL 247 (468)
Q Consensus 170 i~~-~a~~la~~l~~-Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~ 247 (468)
+.. +++.|+ .. ||.|+++|+.|+.. .++. +++..+++.+ +. .++++
T Consensus 23 ~~~~~~~~l~---~~~g~~vi~~d~~g~~~-----------------------~~~~-~~~~~~~~~l----~~-~~~~~ 70 (194)
T 2qs9_A 23 WYGWVKKELE---KIPGFQCLAKNMPDPIT-----------------------ARES-IWLPFMETEL----HC-DEKTI 70 (194)
T ss_dssp THHHHHHHHT---TSTTCCEEECCCSSTTT-----------------------CCHH-HHHHHHHHTS----CC-CTTEE
T ss_pred HHHHHHHHHh---hccCceEEEeeCCCCCc-----------------------ccHH-HHHHHHHHHh----Cc-CCCEE
Confidence 444 677777 66 99999999987421 0122 4444444433 33 14999
Q ss_pred EEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCc
Q 012210 248 AIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSP 327 (468)
Q Consensus 248 lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (468)
++||||||.+++.+|.++ | |+++|+++++........
T Consensus 71 lvG~S~Gg~ia~~~a~~~-----p--v~~lvl~~~~~~~~~~~~------------------------------------ 107 (194)
T 2qs9_A 71 IIGHSSGAIAAMRYAETH-----R--VYAIVLVSAYTSDLGDEN------------------------------------ 107 (194)
T ss_dssp EEEETHHHHHHHHHHHHS-----C--CSEEEEESCCSSCTTCHH------------------------------------
T ss_pred EEEcCcHHHHHHHHHHhC-----C--CCEEEEEcCCccccchhh------------------------------------
Confidence 999999999999999986 5 999999998654211100
Q ss_pred hhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecCCCCc
Q 012210 328 PYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLI 407 (468)
Q Consensus 328 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~D~i 407 (468)
.....++. . .. ....+.++.+|+|+++|++|.+
T Consensus 108 ----~~~~~~~~---------------~---~~-------------------------~~~~~~~~~~p~lii~G~~D~~ 140 (194)
T 2qs9_A 108 ----ERASGYFT---------------R---PW-------------------------QWEKIKANCPYIVQFGSTDDPF 140 (194)
T ss_dssp ----HHHTSTTS---------------S---CC-------------------------CHHHHHHHCSEEEEEEETTCSS
T ss_pred ----hHHHhhhc---------------c---cc-------------------------cHHHHHhhCCCEEEEEeCCCCc
Confidence 00000000 0 00 0012334568999999999999
Q ss_pred CCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccC
Q 012210 408 CPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 466 (468)
Q Consensus 408 vp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~ 466 (468)
+|++.++.+.+.+ +. +++++ ++++|+.+.+ .|+.+.+. ++||+++..
T Consensus 141 vp~~~~~~~~~~~-~~--~~~~~--~~~gH~~~~~------~p~~~~~~-~~fl~~~~~ 187 (194)
T 2qs9_A 141 LPWKEQQEVADRL-ET--KLHKF--TDCGHFQNTE------FHELITVV-KSLLKVPAL 187 (194)
T ss_dssp SCHHHHHHHHHHH-TC--EEEEE--SSCTTSCSSC------CHHHHHHH-HHHHTCCCC
T ss_pred CCHHHHHHHHHhc-CC--eEEEe--CCCCCccchh------CHHHHHHH-HHHHHhhhh
Confidence 9999999999988 65 78888 8999999987 77777655 599998753
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 | Back alignment and structure |
|---|
Probab=99.64 E-value=5.5e-16 Score=141.71 Aligned_cols=172 Identities=18% Similarity=0.177 Sum_probs=124.3
Q ss_pred ccccccccccccchhh--HHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhH-HhhhHHHHHH
Q 012210 157 LLERRQSSAIAIQIRD--LSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHY-LEEDVPAAME 233 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~--~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~-~~~D~~a~i~ 233 (468)
++-.+.+.|-...+.. +++.|+ .+||.|+++|+.+++...... ..+++.++ ..+|+.++++
T Consensus 35 vv~~hG~~~~~~~~~~~~~~~~l~---~~G~~v~~~d~~g~g~s~~~~-------------~~~~~~~~~~~~~~~~~~~ 98 (210)
T 1imj_A 35 VLLLHGIRFSSETWQNLGTLHRLA---QAGYRAVAIDLPGLGHSKEAA-------------APAPIGELAPGSFLAAVVD 98 (210)
T ss_dssp EEECCCTTCCHHHHHHHTHHHHHH---HTTCEEEEECCTTSGGGTTSC-------------CSSCTTSCCCTHHHHHHHH
T ss_pred EEEECCCCCccceeecchhHHHHH---HCCCeEEEecCCCCCCCCCCC-------------CcchhhhcchHHHHHHHHH
Confidence 4443444444455555 467777 899999999999886531110 11122222 0166666666
Q ss_pred HHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcch
Q 012210 234 YIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPL 313 (468)
Q Consensus 234 ~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (468)
.+. . ++++++|||+||.+++.++..+ +++++++|++++......
T Consensus 99 ~~~----~--~~~~l~G~S~Gg~~a~~~a~~~-----~~~v~~~v~~~~~~~~~~------------------------- 142 (210)
T 1imj_A 99 ALE----L--GPPVVISPSLSGMYSLPFLTAP-----GSQLPGFVPVAPICTDKI------------------------- 142 (210)
T ss_dssp HHT----C--CSCEEEEEGGGHHHHHHHHTST-----TCCCSEEEEESCSCGGGS-------------------------
T ss_pred HhC----C--CCeEEEEECchHHHHHHHHHhC-----ccccceEEEeCCCccccc-------------------------
Confidence 653 2 3899999999999999999886 788999999987532000
Q ss_pred HhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCcc
Q 012210 314 GALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKC 393 (468)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I 393 (468)
....+.++
T Consensus 143 ------------------------------------------------------------------------~~~~~~~~ 150 (210)
T 1imj_A 143 ------------------------------------------------------------------------NAANYASV 150 (210)
T ss_dssp ------------------------------------------------------------------------CHHHHHTC
T ss_pred ------------------------------------------------------------------------cchhhhhC
Confidence 00123457
Q ss_pred CccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 394 NIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 394 ~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
++|+++++|++|. ++++..+.+ +.+++. +++++ ++++|..+.+ .++.+.+.|.+||+++
T Consensus 151 ~~p~l~i~g~~D~-~~~~~~~~~-~~~~~~--~~~~~--~~~~H~~~~~------~~~~~~~~i~~fl~~~ 209 (210)
T 1imj_A 151 KTPALIVYGDQDP-MGQTSFEHL-KQLPNH--RVLIM--KGAGHPCYLD------KPEEWHTGLLDFLQGL 209 (210)
T ss_dssp CSCEEEEEETTCH-HHHHHHHHH-TTSSSE--EEEEE--TTCCTTHHHH------CHHHHHHHHHHHHHTC
T ss_pred CCCEEEEEcCccc-CCHHHHHHH-hhCCCC--CEEEe--cCCCcchhhc------CHHHHHHHHHHHHHhc
Confidence 8999999999999 999999999 888865 78887 8999998887 7899999999999875
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} | Back alignment and structure |
|---|
Probab=99.64 E-value=5.9e-15 Score=146.49 Aligned_cols=232 Identities=16% Similarity=0.105 Sum_probs=138.1
Q ss_pred ccccccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHh--hcccce-----EeecCChhhHHh
Q 012210 153 KLSSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQ--KQLDLI-----VQYDWDFDHYLE 225 (468)
Q Consensus 153 ~~~~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~--~~~~~~-----~~~D~~~~~~~~ 225 (468)
..+.++..++..|.......+. .++ ..||.|+++|+.|++..-........ ..++.. ...++.+..+.
T Consensus 107 ~~p~vv~~HG~g~~~~~~~~~~-~~~---~~G~~v~~~D~rG~g~s~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~- 181 (346)
T 3fcy_A 107 KHPALIRFHGYSSNSGDWNDKL-NYV---AAGFTVVAMDVRGQGGQSQDVGGVTGNTLNGHIIRGLDDDADNMLFRHIF- 181 (346)
T ss_dssp CEEEEEEECCTTCCSCCSGGGH-HHH---TTTCEEEEECCTTSSSSCCCCCCCSSCCSBCSSSTTTTSCGGGCHHHHHH-
T ss_pred CcCEEEEECCCCCCCCChhhhh-HHH---hCCcEEEEEcCCCCCCCCCCCcccCCCCcCcceeccccCCHHHHHHHHHH-
Confidence 3444555455545455555554 344 79999999999998753211100000 000000 01122344554
Q ss_pred hhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhh
Q 012210 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQA 305 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~ 305 (468)
+|+.++++++......+.++++++|||+||.+++.+|..+ |+ |+++|+++|....... ...
T Consensus 182 ~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~-----p~-v~~~vl~~p~~~~~~~--~~~----------- 242 (346)
T 3fcy_A 182 LDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALE-----PR-VRKVVSEYPFLSDYKR--VWD----------- 242 (346)
T ss_dssp HHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHS-----TT-CCEEEEESCSSCCHHH--HHH-----------
T ss_pred HHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhC-----cc-ccEEEECCCcccCHHH--Hhh-----------
Confidence 8999999999887544445899999999999999999985 54 9999999875431100 000
Q ss_pred cCCCCcchHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccc
Q 012210 306 LNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFF 385 (468)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (468)
......... .+..++... ........ .....+. ..+
T Consensus 243 ~~~~~~~~~--------------~~~~~~~~~------------------~~~~~~~~---~~~~~~~---------~~d 278 (346)
T 3fcy_A 243 LDLAKNAYQ--------------EITDYFRLF------------------DPRHEREN---EVFTKLG---------YID 278 (346)
T ss_dssp TTCCCGGGH--------------HHHHHHHHH------------------CTTCTTHH---HHHHHHG---------GGC
T ss_pred ccccccchH--------------HHHHHHHhc------------------CCCcchHH---HHHHHhC---------ccc
Confidence 000000000 000111100 00000000 0111110 112
Q ss_pred cccccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 386 YKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 386 ~~~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
....+.++++|+|+++|+.|.++|++.+.++++.++. .++++++ ++++|..+ +++.+.+.+||++..
T Consensus 279 ~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~--~~~gH~~~----------~~~~~~i~~fl~~l~ 345 (346)
T 3fcy_A 279 VKNLAKRIKGDVLMCVGLMDQVCPPSTVFAAYNNIQS-KKDIKVY--PDYGHEPM----------RGFGDLAMQFMLELY 345 (346)
T ss_dssp HHHHGGGCCSEEEEEEETTCSSSCHHHHHHHHTTCCS-SEEEEEE--TTCCSSCC----------TTHHHHHHHHHHTTC
T ss_pred HHHHHHhcCCCEEEEeeCCCCcCCHHHHHHHHHhcCC-CcEEEEe--CCCCCcCH----------HHHHHHHHHHHHHhh
Confidence 3345678999999999999999999999999999986 5688888 88888876 456788999998753
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.63 E-value=7.4e-15 Score=130.57 Aligned_cols=155 Identities=14% Similarity=0.169 Sum_probs=115.7
Q ss_pred chhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEE
Q 012210 169 QIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLA 248 (468)
Q Consensus 169 ~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~l 248 (468)
.+..+++.|+ .+||.|+++|+.+++... + .....++. +++..++++++...+. .++++
T Consensus 21 ~~~~~~~~l~---~~g~~v~~~d~~g~g~s~----------~------~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~l 78 (176)
T 2qjw_A 21 KVTALAEVAE---RLGWTHERPDFTDLDARR----------D------LGQLGDVR-GRLQRLLEIARAATEK--GPVVL 78 (176)
T ss_dssp HHHHHHHHHH---HTTCEEECCCCHHHHTCG----------G------GCTTCCHH-HHHHHHHHHHHHHHTT--SCEEE
T ss_pred HHHHHHHHHH---HCCCEEEEeCCCCCCCCC----------C------CCCCCCHH-HHHHHHHHHHHhcCCC--CCEEE
Confidence 3457888888 899999999999876521 0 00112232 5556666666665433 39999
Q ss_pred EEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCch
Q 012210 249 IGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPP 328 (468)
Q Consensus 249 vGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (468)
+||||||.+++.++.++ + ++++|+++|+......
T Consensus 79 ~G~S~Gg~~a~~~a~~~-----~--~~~~v~~~~~~~~~~~--------------------------------------- 112 (176)
T 2qjw_A 79 AGSSLGSYIAAQVSLQV-----P--TRALFLMVPPTKMGPL--------------------------------------- 112 (176)
T ss_dssp EEETHHHHHHHHHHTTS-----C--CSEEEEESCCSCBTTB---------------------------------------
T ss_pred EEECHHHHHHHHHHHhc-----C--hhheEEECCcCCcccc---------------------------------------
Confidence 99999999999999885 4 9999999876442110
Q ss_pred hHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecCCCCcC
Q 012210 329 YVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLIC 408 (468)
Q Consensus 329 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~D~iv 408 (468)
..+.++++|+|+++|++|.++
T Consensus 113 -----------------------------------------------------------~~~~~~~~P~l~i~g~~D~~~ 133 (176)
T 2qjw_A 113 -----------------------------------------------------------PALDAAAVPISIVHAWHDELI 133 (176)
T ss_dssp -----------------------------------------------------------CCCCCCSSCEEEEEETTCSSS
T ss_pred -----------------------------------------------------------CcccccCCCEEEEEcCCCCcc
Confidence 003567899999999999999
Q ss_pred CHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 409 PPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 409 p~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
|++.++.+.+.+ +. +++++ +++|..+ + .++++.+.|.+||++
T Consensus 134 ~~~~~~~~~~~~-~~--~~~~~---~~~H~~~-~------~~~~~~~~i~~fl~~ 175 (176)
T 2qjw_A 134 PAADVIAWAQAR-SA--RLLLV---DDGHRLG-A------HVQAASRAFAELLQS 175 (176)
T ss_dssp CHHHHHHHHHHH-TC--EEEEE---SSCTTCT-T------CHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHhC-Cc--eEEEe---CCCcccc-c------cHHHHHHHHHHHHHh
Confidence 999999999887 33 77776 5788874 3 789999999999975
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.63 E-value=1.9e-14 Score=132.57 Aligned_cols=162 Identities=20% Similarity=0.242 Sum_probs=124.6
Q ss_pred cchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEE
Q 012210 168 IQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLL 247 (468)
Q Consensus 168 ~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~ 247 (468)
..++.+++.|+ .+||.|+++|+.+++.... . .+ ...... +|+.++++++..+.+.. +++
T Consensus 56 ~~~~~~~~~l~---~~g~~v~~~d~~g~g~s~~----------~----~~-~~~~~~-~d~~~~~~~l~~~~~~~--~i~ 114 (220)
T 2fuk_A 56 KVVTMAARALR---ELGITVVRFNFRSVGTSAG----------S----FD-HGDGEQ-DDLRAVAEWVRAQRPTD--TLW 114 (220)
T ss_dssp HHHHHHHHHHH---TTTCEEEEECCTTSTTCCS----------C----CC-TTTHHH-HHHHHHHHHHHHHCTTS--EEE
T ss_pred hHHHHHHHHHH---HCCCeEEEEecCCCCCCCC----------C----cc-cCchhH-HHHHHHHHHHHhcCCCC--cEE
Confidence 44577888888 8899999999998865211 0 01 123344 99999999999886544 999
Q ss_pred EEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCc
Q 012210 248 AIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSP 327 (468)
Q Consensus 248 lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (468)
++||||||.+++.++.+ . +++++|+++++.....
T Consensus 115 l~G~S~Gg~~a~~~a~~------~-~v~~~v~~~~~~~~~~--------------------------------------- 148 (220)
T 2fuk_A 115 LAGFSFGAYVSLRAAAA------L-EPQVLISIAPPAGRWD--------------------------------------- 148 (220)
T ss_dssp EEEETHHHHHHHHHHHH------H-CCSEEEEESCCBTTBC---------------------------------------
T ss_pred EEEECHHHHHHHHHHhh------c-cccEEEEecccccchh---------------------------------------
Confidence 99999999999999987 4 8999999988643110
Q ss_pred hhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecCCCCc
Q 012210 328 PYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLI 407 (468)
Q Consensus 328 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~D~i 407 (468)
+ ..+. ..+|+|+++|++|.+
T Consensus 149 --------------------------------------------~---------------~~~~-~~~p~l~i~g~~D~~ 168 (220)
T 2fuk_A 149 --------------------------------------------F---------------SDVQ-PPAQWLVIQGDADEI 168 (220)
T ss_dssp --------------------------------------------C---------------TTCC-CCSSEEEEEETTCSS
T ss_pred --------------------------------------------h---------------hhcc-cCCcEEEEECCCCcc
Confidence 0 0011 258999999999999
Q ss_pred CCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccC
Q 012210 408 CPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 466 (468)
Q Consensus 408 vp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~ 466 (468)
+|++.++++.+.++. ..+++++ ++++|..+. .++++.+.+.+||.+...
T Consensus 169 ~~~~~~~~~~~~~~~-~~~~~~~--~~~~H~~~~-------~~~~~~~~i~~~l~~~l~ 217 (220)
T 2fuk_A 169 VDPQAVYDWLETLEQ-QPTLVRM--PDTSHFFHR-------KLIDLRGALQHGVRRWLP 217 (220)
T ss_dssp SCHHHHHHHHTTCSS-CCEEEEE--TTCCTTCTT-------CHHHHHHHHHHHHGGGCS
T ss_pred cCHHHHHHHHHHhCc-CCcEEEe--CCCCceehh-------hHHHHHHHHHHHHHHHhh
Confidence 999999999999942 3488888 889998776 457899999999988753
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 | Back alignment and structure |
|---|
Probab=99.62 E-value=2.6e-15 Score=135.78 Aligned_cols=180 Identities=12% Similarity=0.155 Sum_probs=117.9
Q ss_pred cccccccccccc-chhhHH-HHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHH
Q 012210 157 LLERRQSSAIAI-QIRDLS-QNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEY 234 (468)
Q Consensus 157 ll~~~~~~G~~~-~i~~~a-~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~ 234 (468)
++-.|++.|-.. .+.... +.|+ .+||.|+++|+..... . ++.+++ +|+.++++.
T Consensus 7 vv~~HG~~~~~~~~~~~~~~~~l~---~~g~~v~~~d~~~~~~-----------~---------~~~~~~-~~~~~~~~~ 62 (192)
T 1uxo_A 7 VYIIHGYRASSTNHWFPWLKKRLL---ADGVQADILNMPNPLQ-----------P---------RLEDWL-DTLSLYQHT 62 (192)
T ss_dssp EEEECCTTCCTTSTTHHHHHHHHH---HTTCEEEEECCSCTTS-----------C---------CHHHHH-HHHHTTGGG
T ss_pred EEEEcCCCCCcchhHHHHHHHHHH---hCCcEEEEecCCCCCC-----------C---------CHHHHH-HHHHHHHHh
Confidence 344344444433 333333 4566 7999999999972211 0 344554 666666555
Q ss_pred HHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcc--cccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcc
Q 012210 235 IRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRES--RLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVP 312 (468)
Q Consensus 235 l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~--~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (468)
+ . ++++++||||||.+++.+|.++ ++ +++++|++++........
T Consensus 63 ~-~------~~~~l~G~S~Gg~~a~~~a~~~-----~~~~~v~~~v~~~~~~~~~~~~---------------------- 108 (192)
T 1uxo_A 63 L-H------ENTYLVAHSLGCPAILRFLEHL-----QLRAALGGIILVSGFAKSLPTL---------------------- 108 (192)
T ss_dssp C-C------TTEEEEEETTHHHHHHHHHHTC-----CCSSCEEEEEEETCCSSCCTTC----------------------
T ss_pred c-c------CCEEEEEeCccHHHHHHHHHHh-----cccCCccEEEEeccCCCccccc----------------------
Confidence 4 1 3899999999999999999987 77 899999998865422100
Q ss_pred hHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCc
Q 012210 313 LGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHK 392 (468)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 392 (468)
.. +. .+. ..+ .++ ..+.+
T Consensus 109 -~~-~~-----------------~~~--------------------~~~----------------------~~~-~~~~~ 126 (192)
T 1uxo_A 109 -QM-LD-----------------EFT--------------------QGS----------------------FDH-QKIIE 126 (192)
T ss_dssp -GG-GG-----------------GGT--------------------CSC----------------------CCH-HHHHH
T ss_pred -hh-hh-----------------hhh--------------------hcC----------------------CCH-HHHHh
Confidence 00 00 000 000 001 23456
Q ss_pred cCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 393 CNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 393 I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
+++|+|+++|++|.++|++.++.+.+.+ +. +++++ ++++|+.+.+- .+...++.+.+.+|+++.
T Consensus 127 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~--~~~~~--~~~gH~~~~~~---~~~~~~~~~~l~~~l~~~ 190 (192)
T 1uxo_A 127 SAKHRAVIASKDDQIVPFSFSKDLAQQI-DA--ALYEV--QHGGHFLEDEG---FTSLPIVYDVLTSYFSKE 190 (192)
T ss_dssp HEEEEEEEEETTCSSSCHHHHHHHHHHT-TC--EEEEE--TTCTTSCGGGT---CSCCHHHHHHHHHHHHC-
T ss_pred hcCCEEEEecCCCCcCCHHHHHHHHHhc-Cc--eEEEe--CCCcCcccccc---cccHHHHHHHHHHHHHHh
Confidence 7899999999999999999999999998 65 78888 89999998761 112234577777777654
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 | Back alignment and structure |
|---|
Probab=99.62 E-value=3.8e-15 Score=137.94 Aligned_cols=207 Identities=14% Similarity=0.066 Sum_probs=130.3
Q ss_pred cccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHH
Q 012210 156 SLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYI 235 (468)
Q Consensus 156 ~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l 235 (468)
.++-.+.+.|-...+..+++.|+ .+||.|+++|+.+++........... ..+ ...+..++..+. +|+.++++++
T Consensus 26 ~vv~~hG~~~~~~~~~~~~~~l~---~~G~~v~~~d~~g~g~s~~~~~~~~~-~~~-~~~~~~~~~~~~-~d~~~~~~~l 99 (238)
T 1ufo_A 26 LLLALHGLQGSKEHILALLPGYA---ERGFLLLAFDAPRHGEREGPPPSSKS-PRY-VEEVYRVALGFK-EEARRVAEEA 99 (238)
T ss_dssp EEEEECCTTCCHHHHHHTSTTTG---GGTEEEEECCCTTSTTSSCCCCCTTS-TTH-HHHHHHHHHHHH-HHHHHHHHHH
T ss_pred EEEEECCCcccchHHHHHHHHHH---hCCCEEEEecCCCCccCCCCCCcccc-cch-hhhHHHHHHHHH-HHHHHHHHHH
Confidence 34554444444445555666666 88999999999998653221100000 000 000000244555 8999999999
Q ss_pred HhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHh
Q 012210 236 RAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGA 315 (468)
Q Consensus 236 ~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (468)
..... .+++++||||||.+++.+|..+ ++.+.++++++++........
T Consensus 100 ~~~~~---~~i~l~G~S~Gg~~a~~~a~~~-----~~~~~~~~~~~~~~~~~~~~~------------------------ 147 (238)
T 1ufo_A 100 ERRFG---LPLFLAGGSLGAFVAHLLLAEG-----FRPRGVLAFIGSGFPMKLPQG------------------------ 147 (238)
T ss_dssp HHHHC---CCEEEEEETHHHHHHHHHHHTT-----CCCSCEEEESCCSSCCCCCTT------------------------
T ss_pred HhccC---CcEEEEEEChHHHHHHHHHHhc-----cCcceEEEEecCCccchhhhh------------------------
Confidence 86643 3999999999999999999986 667777777665432211000
Q ss_pred HHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCcc-C
Q 012210 316 LLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKC-N 394 (468)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I-~ 394 (468)
.+ ...++ ..... ..+....+.++ +
T Consensus 148 ----~~---------------------~~~~~------------------~~~~~------------~~~~~~~~~~~~~ 172 (238)
T 1ufo_A 148 ----QV---------------------VEDPG------------------VLALY------------QAPPATRGEAYGG 172 (238)
T ss_dssp ----CC---------------------CCCHH------------------HHHHH------------HSCGGGCGGGGTT
T ss_pred ----hc---------------------cCCcc------------------cchhh------------cCChhhhhhhccC
Confidence 00 00111 00000 01123456677 8
Q ss_pred ccEEEEecCCCCcCCHHHHHHHHHhCC-CC---ceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 395 IPILAIAGDQDLICPPEAVEETVKLLP-ED---LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 395 vPvLiI~G~~D~ivp~~~~~~l~~~ip-~~---~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
+|+|+++|++|.++|++.++.+.+.++ .. ..+++++ ++++|..+.+ .++++.+.+.+|+.+
T Consensus 173 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~H~~~~~------~~~~~~~~l~~~l~~ 237 (238)
T 1ufo_A 173 VPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVE--EGAGHTLTPL------MARVGLAFLEHWLEA 237 (238)
T ss_dssp CCEEEEEETTCTTTTHHHHHHHHHHHGGGCTTCCEEEEEE--TTCCSSCCHH------HHHHHHHHHHHHHHC
T ss_pred CcEEEEECCCCCccCcHHHHHHHHHHhhcCCCCceEEEEe--CCCCcccHHH------HHHHHHHHHHHHHhc
Confidence 999999999999999999999999988 33 3478888 8899998876 566666666666653
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.1e-14 Score=137.28 Aligned_cols=221 Identities=14% Similarity=0.145 Sum_probs=128.1
Q ss_pred hhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEE
Q 012210 171 RDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIG 250 (468)
Q Consensus 171 ~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvG 250 (468)
..+++.++ .. |.|+++|+.+++.. ++.... +|+.++++++....+.. +++++|
T Consensus 50 ~~~~~~l~---~~-~~v~~~d~~~~~~~--------------------~~~~~~-~d~~~~~~~l~~~~~~~--~i~l~G 102 (275)
T 3h04_A 50 PQYIDILT---EH-YDLIQLSYRLLPEV--------------------SLDCII-EDVYASFDAIQSQYSNC--PIFTFG 102 (275)
T ss_dssp HHHHHHHT---TT-EEEEEECCCCTTTS--------------------CHHHHH-HHHHHHHHHHHHTTTTS--CEEEEE
T ss_pred HHHHHHHH---hC-ceEEeeccccCCcc--------------------ccchhH-HHHHHHHHHHHhhCCCC--CEEEEE
Confidence 36666666 55 99999999876331 233444 89999999999886554 999999
Q ss_pred EehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCchhH
Q 012210 251 HSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYV 330 (468)
Q Consensus 251 hS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (468)
|||||.+++.+|.+ ++++++|+++|......... ..... .... .+..........+......
T Consensus 103 ~S~Gg~~a~~~a~~-------~~v~~~v~~~~~~~~~~~~~--~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~---- 164 (275)
T 3h04_A 103 RSSGAYLSLLIARD-------RDIDGVIDFYGYSRINTEPF--KTTNS---YYAK--IAQSINETMIAQLTSPTPV---- 164 (275)
T ss_dssp ETHHHHHHHHHHHH-------SCCSEEEEESCCSCSCSHHH--HSCCH---HHHH--HHTTSCHHHHHTTSCSSCC----
T ss_pred ecHHHHHHHHHhcc-------CCccEEEecccccccccccc--ccccc---hhhc--ccccchHHHHhcccCCCCc----
Confidence 99999999999985 57999999998776532210 00000 0000 0000000000000000000
Q ss_pred HHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccc-cccccCccCccEEEEecCCCCcCC
Q 012210 331 FSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFF-YKDHIHKCNIPILAIAGDQDLICP 409 (468)
Q Consensus 331 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~I~vPvLiI~G~~D~ivp 409 (468)
............... .....+...+.... ....... ....+.++. |+|+++|++|.++|
T Consensus 165 --------~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-P~lii~G~~D~~~~ 224 (275)
T 3h04_A 165 --------VQDQIAQRFLIYVYA---------RGTGKWINMINIAD--YTDSKYNIAPDELKTLP-PVFIAHCNGDYDVP 224 (275)
T ss_dssp --------SSCSSGGGHHHHHHH---------HHHTCHHHHHCCSC--TTSGGGSCCHHHHTTCC-CEEEEEETTCSSSC
T ss_pred --------CCCccccchhhhhhh---------hhcCchHHhhcccc--ccccccccccchhccCC-CEEEEecCCCCCCC
Confidence 000000000000000 00000011111000 0000000 112346777 99999999999999
Q ss_pred HHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccch---hhHHHHHHHHHhhccC
Q 012210 410 PEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAV---EQVYPCIVQFLGRYDS 466 (468)
Q Consensus 410 ~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~p---e~v~~~I~~FL~~~~~ 466 (468)
++.++++.+.+++. +++++ ++++|..+.+ .+ +++++.+.+||+++..
T Consensus 225 ~~~~~~~~~~~~~~--~~~~~--~~~~H~~~~~------~~~~~~~~~~~i~~fl~~~l~ 274 (275)
T 3h04_A 225 VEESEHIMNHVPHS--TFERV--NKNEHDFDRR------PNDEAITIYRKVVDFLNAITM 274 (275)
T ss_dssp THHHHHHHTTCSSE--EEEEE--CSSCSCTTSS------CCHHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHhcCCc--eEEEe--CCCCCCcccC------CchhHHHHHHHHHHHHHHHhc
Confidence 99999999999976 78888 9999999887 44 6999999999998753
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P | Back alignment and structure |
|---|
Probab=99.62 E-value=7.8e-15 Score=143.94 Aligned_cols=104 Identities=19% Similarity=0.158 Sum_probs=72.3
Q ss_pred ccccccccccccchhhHHHHHHhhhh-cCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIE-EGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYI 235 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~-~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l 235 (468)
++-.|++.+-...++.++..|+ . .+|+|+++|+.|++..-.. ....|++++++ +|+.++++.+
T Consensus 41 lvllHG~~~~~~~w~~~~~~L~---~~~~~~via~Dl~GhG~S~~~------------~~~~~~~~~~a-~dl~~~l~~l 104 (316)
T 3c5v_A 41 LLLLHGGGHSALSWAVFTAAII---SRVQCRIVALDLRSHGETKVK------------NPEDLSAETMA-KDVGNVVEAM 104 (316)
T ss_dssp EEEECCTTCCGGGGHHHHHHHH---TTBCCEEEEECCTTSTTCBCS------------CTTCCCHHHHH-HHHHHHHHHH
T ss_pred EEEECCCCcccccHHHHHHHHh---hcCCeEEEEecCCCCCCCCCC------------CccccCHHHHH-HHHHHHHHHH
Confidence 3443444333344566666666 4 2899999999999763110 01235788887 9999999998
Q ss_pred HhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccc
Q 012210 236 RAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASS 283 (468)
Q Consensus 236 ~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~ 283 (468)
..... .+++++||||||.+++.+|.++. .|. |+++|++++.
T Consensus 105 ~~~~~---~~~~lvGhSmGG~ia~~~A~~~~---~p~-v~~lvl~~~~ 145 (316)
T 3c5v_A 105 YGDLP---PPIMLIGHSMGGAIAVHTASSNL---VPS-LLGLCMIDVV 145 (316)
T ss_dssp HTTCC---CCEEEEEETHHHHHHHHHHHTTC---CTT-EEEEEEESCC
T ss_pred hccCC---CCeEEEEECHHHHHHHHHHhhcc---CCC-cceEEEEccc
Confidence 53211 38999999999999999998520 144 9999999764
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A | Back alignment and structure |
|---|
Probab=99.61 E-value=4.2e-15 Score=142.23 Aligned_cols=181 Identities=17% Similarity=0.127 Sum_probs=120.6
Q ss_pred ccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceE--------eecCChhhHHhhhHHHHHHHHHhh
Q 012210 167 AIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIV--------QYDWDFDHYLEEDVPAAMEYIRAQ 238 (468)
Q Consensus 167 ~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~--------~~D~~~~~~~~~D~~a~i~~l~~~ 238 (468)
.+.+..+++.|+ .+||.|+++|+.+++.+........ ...... .......... .|..++++++...
T Consensus 71 ~~~~~~~a~~la---~~Gy~Vl~~D~rG~G~s~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~d~~a~l~~l~~~ 144 (259)
T 4ao6_A 71 VEYIEQVAKLLV---GRGISAMAIDGPGHGERASVQAGRE--PTDVVGLDAFPRMWHEGGGTAAVI-ADWAAALDFIEAE 144 (259)
T ss_dssp -CHHHHHHHHHH---HTTEEEEEECCCC---------------CCGGGSTTHHHHHHHTTHHHHHH-HHHHHHHHHHHHH
T ss_pred chHHHHHHHHHH---HCCCeEEeeccCCCCCCCCcccccc--cchhhhhhhhhhhhhhhhhHHHHH-HHHHHHHHHhhhc
Confidence 456788999999 9999999999999865321110000 000000 0000112233 7888899998877
Q ss_pred cCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHH
Q 012210 239 SKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLT 318 (468)
Q Consensus 239 ~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (468)
.... ++.++|+||||.+++.+++. .+++++.|+..+......
T Consensus 145 ~d~~--rv~~~G~S~GG~~a~~~a~~------~pri~Aav~~~~~~~~~~------------------------------ 186 (259)
T 4ao6_A 145 EGPR--PTGWWGLSMGTMMGLPVTAS------DKRIKVALLGLMGVEGVN------------------------------ 186 (259)
T ss_dssp HCCC--CEEEEECTHHHHHHHHHHHH------CTTEEEEEEESCCTTSTT------------------------------
T ss_pred cCCc--eEEEEeechhHHHHHHHHhc------CCceEEEEEecccccccc------------------------------
Confidence 6655 99999999999999999988 677888776443211000
Q ss_pred HhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEE
Q 012210 319 AAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPIL 398 (468)
Q Consensus 319 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvL 398 (468)
... ....+.+|++|+|
T Consensus 187 ---------------------------~~~-------------------------------------~~~~a~~i~~P~L 202 (259)
T 4ao6_A 187 ---------------------------GED-------------------------------------LVRLAPQVTCPVR 202 (259)
T ss_dssp ---------------------------HHH-------------------------------------HHHHGGGCCSCEE
T ss_pred ---------------------------ccc-------------------------------------hhhhhccCCCCEE
Confidence 000 0123467899999
Q ss_pred EEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccC
Q 012210 399 AIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 466 (468)
Q Consensus 399 iI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~ 466 (468)
+++|++|.++|++.+..+++.+....+.++++ |+ +|... ...++.+.+.+||++|.+
T Consensus 203 i~hG~~D~~vp~~~~~~l~~al~~~~k~l~~~--~G-~H~~~--------p~~e~~~~~~~fl~~hLk 259 (259)
T 4ao6_A 203 YLLQWDDELVSLQSGLELFGKLGTKQKTLHVN--PG-KHSAV--------PTWEMFAGTVDYLDQRLK 259 (259)
T ss_dssp EEEETTCSSSCHHHHHHHHHHCCCSSEEEEEE--SS-CTTCC--------CHHHHTHHHHHHHHHHCC
T ss_pred EEecCCCCCCCHHHHHHHHHHhCCCCeEEEEe--CC-CCCCc--------CHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999998877888887 43 55322 235678899999999864
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=1.6e-15 Score=145.68 Aligned_cols=221 Identities=17% Similarity=0.108 Sum_probs=132.2
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|.+.|-...++.++..|+ . ||.|+++|+.|++.... . ...+++.+++ +|+.++++.+.
T Consensus 54 lvllHG~~~~~~~~~~l~~~L~---~-~~~v~~~D~~G~G~S~~----------~---~~~~~~~~~a-~~~~~~l~~~~ 115 (280)
T 3qmv_A 54 LVCFPYAGGTVSAFRGWQERLG---D-EVAVVPVQLPGRGLRLR----------E---RPYDTMEPLA-EAVADALEEHR 115 (280)
T ss_dssp EEEECCTTCCGGGGTTHHHHHC---T-TEEEEECCCTTSGGGTT----------S---CCCCSHHHHH-HHHHHHHHHTT
T ss_pred EEEECCCCCChHHHHHHHHhcC---C-CceEEEEeCCCCCCCCC----------C---CCCCCHHHHH-HHHHHHHHHhC
Confidence 4555666666777788888887 4 99999999999876211 1 1234677776 88877777663
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCccccc----ceeEEccccccCCchhhHHhhcccCchhhhcCCCCcc
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLA----AIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVP 312 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~----~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (468)
+. ++++|+||||||.+++.+|.++ ++++. .++++++............ ...
T Consensus 116 ---~~--~~~~lvG~S~Gg~va~~~a~~~-----p~~~~~~~~~l~l~~~~~p~~~~~~~~~---------------~~~ 170 (280)
T 3qmv_A 116 ---LT--HDYALFGHSMGALLAYEVACVL-----RRRGAPRPRHLFVSGSRAPHLYGDRADH---------------TLS 170 (280)
T ss_dssp ---CS--SSEEEEEETHHHHHHHHHHHHH-----HHTTCCCCSCEEEESCCCGGGCSCCCGG---------------GSC
T ss_pred ---CC--CCEEEEEeCHhHHHHHHHHHHH-----HHcCCCCceEEEEECCCCCCCcCccccc---------------ccC
Confidence 12 3899999999999999999997 76666 6666655332211100000 000
Q ss_pred hHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCc
Q 012210 313 LGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHK 392 (468)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 392 (468)
...+ ...+..+... ....... ..........+......... +. ...+.+
T Consensus 171 ~~~~--------------~~~~~~~~~~----~~~~~~~---~~~~~~~~~~~~~~~~~~~~---------~~-~~~~~~ 219 (280)
T 3qmv_A 171 DTAL--------------REVIRDLGGL----DDADTLG---AAYFDRRLPVLRADLRACER---------YD-WHPRPP 219 (280)
T ss_dssp HHHH--------------HHHHHHHTCC----C------------CCTTHHHHHHHHHHHHT---------CC-CCCCCC
T ss_pred HHHH--------------HHHHHHhCCC----ChhhhcC---HHHHHHHHHHHHHHHHHHHh---------cc-ccCCCc
Confidence 0000 0111111000 0110000 00001111111111111111 00 123678
Q ss_pred cCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcc--cccccccchhhHHHHHHHHH
Q 012210 393 CNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHY--DLVGGRMAVEQVYPCIVQFL 461 (468)
Q Consensus 393 I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~--e~~~~~~~pe~v~~~I~~FL 461 (468)
|++|+|+|+|++|.++|++.++.+.+.+++. ..++++ +++|+.+. + .++++.+.|.+||
T Consensus 220 i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~-~~~~~~---~ggH~~~~~~~------~~~~~~~~i~~~L 280 (280)
T 3qmv_A 220 LDCPTTAFSAAADPIATPEMVEAWRPYTTGS-FLRRHL---PGNHFFLNGGP------SRDRLLAHLGTEL 280 (280)
T ss_dssp BCSCEEEEEEEECSSSCHHHHHTTGGGBSSC-EEEEEE---EEETTGGGSSH------HHHHHHHHHHTTC
T ss_pred eecCeEEEEecCCCCcChHHHHHHHHhcCCc-eEEEEe---cCCCeEEcCch------hHHHHHHHHHhhC
Confidence 9999999999999999999999999999873 466665 35999888 5 7889999988875
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=7.5e-15 Score=134.75 Aligned_cols=192 Identities=14% Similarity=0.108 Sum_probs=125.7
Q ss_pred ccccccccccccccchhhHHHHHHhhhh--cCceEeccCccccccCCc---cchH--HHhhcccceEeecCChhhHHhhh
Q 012210 155 SSLLERRQSSAIAIQIRDLSQNLVNMIE--EGQLSVSPQLFDLQERLF---STID--DFQKQLDLIVQYDWDFDHYLEED 227 (468)
Q Consensus 155 ~~ll~~~~~~G~~~~i~~~a~~la~~l~--~Gy~viapdl~~~~~~~~---~~~~--~l~~~~~~~~~~D~~~~~~~~~D 227 (468)
..++-.|.+.|-...+..+++.|+ . .||.|++||+.+...... .... ++...+.......+++.++. +|
T Consensus 15 ~~vv~~HG~~~~~~~~~~~~~~l~---~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~~~~~~~~~~-~~ 90 (218)
T 1auo_A 15 ACVIWLHGLGADRYDFMPVAEALQ---ESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELEVSA-KM 90 (218)
T ss_dssp EEEEEECCTTCCTTTTHHHHHHHH---TTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHHHHHHH-HH
T ss_pred cEEEEEecCCCChhhHHHHHHHHh---hcCCceEEEeCCCCCccccCCCCCcccceecCcCCCcccccchHHHHHHH-HH
Confidence 345565666666667788888888 7 999999999864210000 0000 00000000011122355555 88
Q ss_pred HHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHH-hcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhc
Q 012210 228 VPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLS-RCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQAL 306 (468)
Q Consensus 228 ~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~-~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~ 306 (468)
+.++++++.. .+.+..+++++||||||.+++.+|. ++ +++++++|++++......
T Consensus 91 ~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~-----~~~~~~~v~~~~~~~~~~------------------ 146 (218)
T 1auo_A 91 VTDLIEAQKR-TGIDASRIFLAGFSQGGAVVFHTAFINW-----QGPLGGVIALSTYAPTFG------------------ 146 (218)
T ss_dssp HHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHTTC-----CSCCCEEEEESCCCTTCC------------------
T ss_pred HHHHHHHHHH-cCCCcccEEEEEECHHHHHHHHHHHhcC-----CCCccEEEEECCCCCCch------------------
Confidence 8888888865 3443458999999999999999999 86 788999999988543200
Q ss_pred CCCCcchHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCcccc
Q 012210 307 NVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFY 386 (468)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (468)
+. . .
T Consensus 147 ----------------~~--------------------~-------------~--------------------------- 150 (218)
T 1auo_A 147 ----------------DE--------------------L-------------E--------------------------- 150 (218)
T ss_dssp ----------------TT--------------------C-------------C---------------------------
T ss_pred ----------------hh--------------------h-------------h---------------------------
Confidence 00 0 0
Q ss_pred ccccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCC--ceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 387 KDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPED--LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 387 ~~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~--~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
....++++|+|+++|++|.++|++.++.+.+.+++. ..+++++ + ++|..+.+ .+ +.+.+||.++
T Consensus 151 -~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~--~-~gH~~~~~------~~----~~~~~~l~~~ 216 (218)
T 1auo_A 151 -LSASQQRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEY--P-MGHEVLPQ------EI----HDIGAWLAAR 216 (218)
T ss_dssp -CCHHHHTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEE--S-CSSSCCHH------HH----HHHHHHHHHH
T ss_pred -hhhcccCCCEEEEEeCCCceecHHHHHHHHHHHHhCCCceEEEEe--c-CCCccCHH------HH----HHHHHHHHHH
Confidence 001346899999999999999999999999988863 4577887 7 89987765 33 4555665543
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.60 E-value=6.5e-14 Score=139.30 Aligned_cols=105 Identities=18% Similarity=0.116 Sum_probs=77.1
Q ss_pred cccccccccccccchhh-HHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCC-hhhHHhhhHHHHHH
Q 012210 156 SLLERRQSSAIAIQIRD-LSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWD-FDHYLEEDVPAAME 233 (468)
Q Consensus 156 ~ll~~~~~~G~~~~i~~-~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~-~~~~~~~D~~a~i~ 233 (468)
.++-.|.+.|....+.. +++.|+ .+||.|+++|+.|++.... .. .++. ..... +|+.++++
T Consensus 98 ~vv~~hG~~~~~~~~~~~~~~~l~---~~G~~v~~~d~~g~g~s~~----------~~---~~~~~~~~~~-~d~~~~~~ 160 (367)
T 2hdw_A 98 AIVIGGPFGAVKEQSSGLYAQTMA---ERGFVTLAFDPSYTGESGG----------QP---RNVASPDINT-EDFSAAVD 160 (367)
T ss_dssp EEEEECCTTCCTTSHHHHHHHHHH---HTTCEEEEECCTTSTTSCC----------SS---SSCCCHHHHH-HHHHHHHH
T ss_pred EEEEECCCCCcchhhHHHHHHHHH---HCCCEEEEECCCCcCCCCC----------cC---ccccchhhHH-HHHHHHHH
Confidence 35555666666665654 788888 8999999999999865311 00 0111 33444 99999999
Q ss_pred HHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccc
Q 012210 234 YIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASS 283 (468)
Q Consensus 234 ~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~ 283 (468)
++..+...+.++++++|||+||.+++.+|..+ | +|+++|+++|.
T Consensus 161 ~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-----p-~~~~~v~~~p~ 204 (367)
T 2hdw_A 161 FISLLPEVNRERIGVIGICGWGGMALNAVAVD-----K-RVKAVVTSTMY 204 (367)
T ss_dssp HHHHCTTEEEEEEEEEEETHHHHHHHHHHHHC-----T-TCCEEEEESCC
T ss_pred HHHhCcCCCcCcEEEEEECHHHHHHHHHHhcC-----C-CccEEEEeccc
Confidence 99887544345899999999999999999984 4 79999999864
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.60 E-value=1.8e-14 Score=137.71 Aligned_cols=207 Identities=14% Similarity=0.090 Sum_probs=138.6
Q ss_pred cccccccc---ccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHH
Q 012210 155 SSLLERRQ---SSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAA 231 (468)
Q Consensus 155 ~~ll~~~~---~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~ 231 (468)
+.++-.++ ..|-......+++.|+ .+||.|+++|+.+++... + ...+.... +|+.++
T Consensus 44 p~vv~~HGgg~~~~~~~~~~~~~~~l~---~~G~~v~~~d~~g~g~s~----------~------~~~~~~~~-~d~~~~ 103 (276)
T 3hxk_A 44 PAIIICPGGGYQHISQRESDPLALAFL---AQGYQVLLLNYTVMNKGT----------N------YNFLSQNL-EEVQAV 103 (276)
T ss_dssp CEEEEECCSTTTSCCGGGSHHHHHHHH---HTTCEEEEEECCCTTSCC----------C------SCTHHHHH-HHHHHH
T ss_pred CEEEEEcCCccccCCchhhHHHHHHHH---HCCCEEEEecCccCCCcC----------C------CCcCchHH-HHHHHH
Confidence 33454444 3344566677888888 899999999998875411 0 01233444 899999
Q ss_pred HHHHHhhcC---CCCCcEEEEEEehhHHHHHHHHHh-cCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcC
Q 012210 232 MEYIRAQSK---PKDGKLLAIGHSMGGILLYAMLSR-CGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALN 307 (468)
Q Consensus 232 i~~l~~~~~---~~~~~v~lvGhS~GG~ia~~~a~~-~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (468)
++++..... .+..+++++||||||.+++.++.. + +.+++++|+++|..+.......
T Consensus 104 ~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~-----~~~~~~~v~~~p~~~~~~~~~~--------------- 163 (276)
T 3hxk_A 104 FSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQ-----IHRPKGVILCYPVTSFTFGWPS--------------- 163 (276)
T ss_dssp HHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCS-----TTCCSEEEEEEECCBTTSSCSS---------------
T ss_pred HHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhcc-----CCCccEEEEecCcccHHhhCCc---------------
Confidence 999988742 334599999999999999999986 4 7889999999987654321000
Q ss_pred CCCcchHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccc
Q 012210 308 VPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYK 387 (468)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (468)
. .... .+ . ... . ...+..
T Consensus 164 ~---------------~~~~----~~----------~------------~~~-----------------~----~~~~~~ 181 (276)
T 3hxk_A 164 D---------------LSHF----NF----------E------------IEN-----------------I----SEYNIS 181 (276)
T ss_dssp S---------------SSSS----CC----------C------------CSC-----------------C----GGGBTT
T ss_pred c---------------hhhh----hc----------C------------chh-----------------h----hhCChh
Confidence 0 0000 00 0 000 0 011123
Q ss_pred cccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCC--ceeEEEecCCCCCCCCccccccc-------ccchhhHHHHHH
Q 012210 388 DHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPED--LVTYKVFGEPSGPHYAHYDLVGG-------RMAVEQVYPCIV 458 (468)
Q Consensus 388 ~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~--~~~~~v~~~~~agH~~H~e~~~~-------~~~pe~v~~~I~ 458 (468)
..+.++++|+|+++|++|.++|++.+..+.+.++.. .++++++ ++++|.....--.. ....+++.+.+.
T Consensus 182 ~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~--~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (276)
T 3hxk_A 182 EKVTSSTPPTFIWHTADDEGVPIYNSLKYCDRLSKHQVPFEAHFF--ESGPHGVSLANRTTAPSDAYCLPSVHRWVSWAS 259 (276)
T ss_dssp TTCCTTSCCEEEEEETTCSSSCTHHHHHHHHHHHTTTCCEEEEEE--SCCCTTCTTCSTTSCSSSTTCCHHHHTHHHHHH
T ss_pred hccccCCCCEEEEecCCCceeChHHHHHHHHHHHHcCCCeEEEEE--CCCCCCccccCccccccccccCchHHHHHHHHH
Confidence 456778999999999999999999999998887643 3577777 89999665431100 123477889999
Q ss_pred HHHhhcc
Q 012210 459 QFLGRYD 465 (468)
Q Consensus 459 ~FL~~~~ 465 (468)
+||+++.
T Consensus 260 ~wl~~~~ 266 (276)
T 3hxk_A 260 DWLERQI 266 (276)
T ss_dssp HHHHHHH
T ss_pred HHHHhCc
Confidence 9999874
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.60 E-value=6.6e-15 Score=150.99 Aligned_cols=222 Identities=17% Similarity=0.156 Sum_probs=131.9
Q ss_pred ccccccc-hhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCC
Q 012210 163 SSAIAIQ-IRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKP 241 (468)
Q Consensus 163 ~~G~~~~-i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~ 241 (468)
.||.... .+.+++.|+ .+||.|+++|++++++.... ...+..+|+.++++++..+...
T Consensus 164 ~hG~~~~~~~~~a~~La---~~Gy~V~a~D~rG~g~~~~~------------------~~~~~~~d~~~~~~~l~~~~~v 222 (422)
T 3k2i_A 164 IFGIGGGLLEYRASLLA---GHGFATLALAYYNFEDLPNN------------------MDNISLEYFEEAVCYMLQHPQV 222 (422)
T ss_dssp ECCTTCSCCCHHHHHHH---TTTCEEEEEECSSSTTSCSS------------------CSCEETHHHHHHHHHHHTSTTB
T ss_pred EcCCCcchhHHHHHHHH---hCCCEEEEEccCCCCCCCCC------------------cccCCHHHHHHHHHHHHhCcCc
Confidence 4555443 566788888 99999999999997542110 0011138889999999888665
Q ss_pred CCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhc
Q 012210 242 KDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAY 321 (468)
Q Consensus 242 ~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (468)
+.++++++||||||.+++.+|.++ |+ |+++|+++++............ ...+..+.. ... .
T Consensus 223 ~~~~i~l~G~S~GG~lAl~~a~~~-----p~-v~a~V~~~~~~~~~~~~~~~~~----------~~~~~~~~~--~~~-~ 283 (422)
T 3k2i_A 223 KGPGIGLLGISLGADICLSMASFL-----KN-VSATVSINGSGISGNTAINYKH----------SSIPPLGYD--LRR-I 283 (422)
T ss_dssp CCSSEEEEEETHHHHHHHHHHHHC-----SS-EEEEEEESCCSBCCSSCEEETT----------EEECCCCBC--GGG-C
T ss_pred CCCCEEEEEECHHHHHHHHHHhhC-----cC-ccEEEEEcCcccccCCchhhcC----------CcCCCcccc--hhh-c
Confidence 456999999999999999999985 44 9999999886643221100000 000000000 000 0
Q ss_pred CCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEe
Q 012210 322 PLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIA 401 (468)
Q Consensus 322 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~ 401 (468)
. ........ +...+.. +. .. ........+.+|++|+|+|+
T Consensus 284 ~---------------~~~~~~~~-------~~~~~~~-~~---------------~~--~~~~~~~~~~~i~~P~Lii~ 323 (422)
T 3k2i_A 284 K---------------VAFSGLVD-------IVDIRNA-LV---------------GG--YKNPSMIPIEKAQGPILLIV 323 (422)
T ss_dssp E---------------ECTTSCEE-------CTTCBCC-CT---------------TG--GGSTTBCCGGGCCSCEEEEE
T ss_pred c---------------cCcchhHH-------HHHHHhh-hh---------------hc--ccccccccHHHCCCCEEEEE
Confidence 0 00000000 0000000 00 00 00011235678999999999
Q ss_pred cCCCCcCCHHHH-HHHHHhCCCC---ceeEEEecCCCCCCCCccccc----------------------ccccchhhHHH
Q 012210 402 GDQDLICPPEAV-EETVKLLPED---LVTYKVFGEPSGPHYAHYDLV----------------------GGRMAVEQVYP 455 (468)
Q Consensus 402 G~~D~ivp~~~~-~~l~~~ip~~---~~~~~v~~~~~agH~~H~e~~----------------------~~~~~pe~v~~ 455 (468)
|++|.++|.+.. +.+.+.++.. +.+++++ |+++|.....+. ....+++++++
T Consensus 324 G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~~--~gagH~~~~p~~p~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~ 401 (422)
T 3k2i_A 324 GQDDHNWRSELYAQTVSERLQAHGKEKPQIICY--PGTGHYIEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWK 401 (422)
T ss_dssp ETTCSSSCHHHHHHHHHHHHHHTTCCCCEEEEE--TTCCSCCCSTTCCCCCEEEETTTTEEEECCCCHHHHHHHHHHHHH
T ss_pred eCCCCCCCHHHHHHHHHHHHHhcCCCCCEEEEE--CCCCCEECCCCCCcchhhhccccCceEeeCCccHHHHHHHHHHHH
Confidence 999999998854 5666655431 2477887 999998732210 01236788999
Q ss_pred HHHHHHhhccC
Q 012210 456 CIVQFLGRYDS 466 (468)
Q Consensus 456 ~I~~FL~~~~~ 466 (468)
.|.+||+++..
T Consensus 402 ~i~~Fl~~~L~ 412 (422)
T 3k2i_A 402 QILAFFCKHLG 412 (422)
T ss_dssp HHHHHHHHHC-
T ss_pred HHHHHHHHhcC
Confidence 99999998853
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.60 E-value=1.1e-14 Score=134.98 Aligned_cols=197 Identities=16% Similarity=0.097 Sum_probs=125.9
Q ss_pred ccccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccc--hHH-Hhhccc--ceEeecCChhhHHhhhHH
Q 012210 155 SSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFST--IDD-FQKQLD--LIVQYDWDFDHYLEEDVP 229 (468)
Q Consensus 155 ~~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~--~~~-l~~~~~--~~~~~D~~~~~~~~~D~~ 229 (468)
..++-.|...|-...+..+++.|+ ..||.|+++|..+++...... ... +...++ ......+++.++. +|+.
T Consensus 24 ~~vv~lHG~~~~~~~~~~~~~~l~---~~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~~~~~~~~~~~~~~~~-~~~~ 99 (232)
T 1fj2_A 24 AAVIFLHGLGDTGHGWAEAFAGIR---SSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQEDESGIKQAA-ENIK 99 (232)
T ss_dssp EEEEEECCSSSCHHHHHHHHHTTC---CTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTCCBCHHHHHHHH-HHHH
T ss_pred ceEEEEecCCCccchHHHHHHHHh---cCCcEEEecCCCccccccccccccccccccccCCcccccccHHHHHHH-HHHH
Confidence 344554444444444555555555 679999999776532210000 000 000000 0000112355665 8888
Q ss_pred HHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCC
Q 012210 230 AAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVP 309 (468)
Q Consensus 230 a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (468)
++++++.. .+.+..+++++||||||.+++.++.++ +++++++|++++.......
T Consensus 100 ~~i~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~-----~~~v~~~i~~~~~~~~~~~-------------------- 153 (232)
T 1fj2_A 100 ALIDQEVK-NGIPSNRIILGGFSQGGALSLYTALTT-----QQKLAGVTALSCWLPLRAS-------------------- 153 (232)
T ss_dssp HHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHTTC-----SSCCSEEEEESCCCTTGGG--------------------
T ss_pred HHHHHHhc-CCCCcCCEEEEEECHHHHHHHHHHHhC-----CCceeEEEEeecCCCCCcc--------------------
Confidence 88888876 444335999999999999999999986 7889999999885432100
Q ss_pred CcchHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccc
Q 012210 310 VVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDH 389 (468)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (468)
+ . . ....
T Consensus 154 -----------~-----------------------~-------------~--------------------------~~~~ 160 (232)
T 1fj2_A 154 -----------F-----------------------P-------------Q--------------------------GPIG 160 (232)
T ss_dssp -----------S-----------------------C-------------S--------------------------SCCC
T ss_pred -----------c-----------------------c-------------c--------------------------cccc
Confidence 0 0 0 0123
Q ss_pred cCccCccEEEEecCCCCcCCHHHHHHHHHhCCC----CceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 390 IHKCNIPILAIAGDQDLICPPEAVEETVKLLPE----DLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 390 l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~----~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
+.++++|+|+++|++|.++|++.++++.+.+.. .+.+++++ ++++|..+.+ ..+.|.+||+++.
T Consensus 161 ~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~H~~~~~----------~~~~i~~~l~~~l 228 (232)
T 1fj2_A 161 GANRDISILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTY--EGMMHSSCQQ----------EMMDVKQFIDKLL 228 (232)
T ss_dssp STTTTCCEEEEEETTCSSSCHHHHHHHHHHHHHHSCGGGEEEEEE--TTCCSSCCHH----------HHHHHHHHHHHHS
T ss_pred cccCCCCEEEEecCCCccCCHHHHHHHHHHHHHhCCCCceEEEEe--CCCCcccCHH----------HHHHHHHHHHHhc
Confidence 567889999999999999999998888877742 13588888 8889988643 2367788887764
Q ss_pred C
Q 012210 466 S 466 (468)
Q Consensus 466 ~ 466 (468)
.
T Consensus 229 ~ 229 (232)
T 1fj2_A 229 P 229 (232)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} | Back alignment and structure |
|---|
Probab=99.59 E-value=1.4e-14 Score=137.92 Aligned_cols=168 Identities=13% Similarity=0.082 Sum_probs=121.8
Q ss_pred ccccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHH
Q 012210 155 SSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEY 234 (468)
Q Consensus 155 ~~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~ 234 (468)
..++-.|.+.|-...+..+++.|+ .+||.|+++|+.+... . .|+..++++
T Consensus 50 p~vv~~HG~~~~~~~~~~~~~~l~---~~G~~v~~~d~~~s~~--------------------------~-~~~~~~~~~ 99 (258)
T 2fx5_A 50 PVILWGNGTGAGPSTYAGLLSHWA---SHGFVVAAAETSNAGT--------------------------G-REMLACLDY 99 (258)
T ss_dssp EEEEEECCTTCCGGGGHHHHHHHH---HHTCEEEEECCSCCTT--------------------------S-HHHHHHHHH
T ss_pred eEEEEECCCCCCchhHHHHHHHHH---hCCeEEEEecCCCCcc--------------------------H-HHHHHHHHH
Confidence 345665666666677788888898 8999999999874210 1 333344444
Q ss_pred HHhhc---------CCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhh
Q 012210 235 IRAQS---------KPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQA 305 (468)
Q Consensus 235 l~~~~---------~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~ 305 (468)
+.... ..+.++++++||||||.+++.+|. +++++++|++++.....
T Consensus 100 l~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~-------~~~v~~~v~~~~~~~~~------------------ 154 (258)
T 2fx5_A 100 LVRENDTPYGTYSGKLNTGRVGTSGHSQGGGGSIMAGQ-------DTRVRTTAPIQPYTLGL------------------ 154 (258)
T ss_dssp HHHHHHSSSSTTTTTEEEEEEEEEEEEHHHHHHHHHTT-------STTCCEEEEEEECCSST------------------
T ss_pred HHhcccccccccccccCccceEEEEEChHHHHHHHhcc-------CcCeEEEEEecCccccc------------------
Confidence 43321 111248999999999999999882 67899999987632100
Q ss_pred cCCCCcchHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccc
Q 012210 306 LNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFF 385 (468)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (468)
..
T Consensus 155 -----------------------------------------------------~~------------------------- 156 (258)
T 2fx5_A 155 -----------------------------------------------------GH------------------------- 156 (258)
T ss_dssp -----------------------------------------------------TC-------------------------
T ss_pred -----------------------------------------------------cc-------------------------
Confidence 00
Q ss_pred cccccCccCccEEEEecCCCCcCCHHH-HHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 386 YKDHIHKCNIPILAIAGDQDLICPPEA-VEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 386 ~~~~l~~I~vPvLiI~G~~D~ivp~~~-~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
....+.++++|+|+|+|++|.++|++. .+.+.+.. +..++++++ ++++|..+.+ .++.+.+.|.+||+++
T Consensus 157 ~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~--~g~~H~~~~~------~~~~~~~~i~~fl~~~ 227 (258)
T 2fx5_A 157 DSASQRRQQGPMFLMSGGGDTIAFPYLNAQPVYRRA-NVPVFWGER--RYVSHFEPVG------SGGAYRGPSTAWFRFQ 227 (258)
T ss_dssp CGGGGGCCSSCEEEEEETTCSSSCHHHHTHHHHHHC-SSCEEEEEE--SSCCTTSSTT------TCGGGHHHHHHHHHHH
T ss_pred chhhhccCCCCEEEEEcCCCcccCchhhHHHHHhcc-CCCeEEEEE--CCCCCccccc------hHHHHHHHHHHHHHHH
Confidence 012356789999999999999999986 88888884 345688888 8999999987 7789999999999865
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 | Back alignment and structure |
|---|
Probab=99.59 E-value=3.4e-14 Score=143.65 Aligned_cols=198 Identities=14% Similarity=0.128 Sum_probs=127.5
Q ss_pred cchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEE
Q 012210 168 IQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLL 247 (468)
Q Consensus 168 ~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~ 247 (468)
......+..|+ .+||.|+++|+.|++... ... .. ..++. +++.++++++..+...+.++++
T Consensus 166 ~~~~~~~~~l~---~~G~~v~~~d~rG~G~s~----------~~~--~~---~~~~~-~~~~~~~~~l~~~~~~~~~~i~ 226 (386)
T 2jbw_A 166 EESFQMENLVL---DRGMATATFDGPGQGEMF----------EYK--RI---AGDYE-KYTSAVVDLLTKLEAIRNDAIG 226 (386)
T ss_dssp TTTHHHHHHHH---HTTCEEEEECCTTSGGGT----------TTC--CS---CSCHH-HHHHHHHHHHHHCTTEEEEEEE
T ss_pred HHHHHHHHHHH---hCCCEEEEECCCCCCCCC----------CCC--CC---CccHH-HHHHHHHHHHHhCCCcCcccEE
Confidence 33445566666 899999999999986520 000 01 11232 5677788888775333335899
Q ss_pred EEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCc
Q 012210 248 AIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSP 327 (468)
Q Consensus 248 lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (468)
++|||+||.+++.++.+ +++++++|++ +..+...... .. +
T Consensus 227 l~G~S~GG~la~~~a~~------~~~~~a~v~~-~~~~~~~~~~---------------~~------------------~ 266 (386)
T 2jbw_A 227 VLGRSLGGNYALKSAAC------EPRLAACISW-GGFSDLDYWD---------------LE------------------T 266 (386)
T ss_dssp EEEETHHHHHHHHHHHH------CTTCCEEEEE-SCCSCSTTGG---------------GS------------------C
T ss_pred EEEEChHHHHHHHHHcC------CcceeEEEEe-ccCChHHHHH---------------hc------------------c
Confidence 99999999999999987 7799999999 7655432110 00 0
Q ss_pred hhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecCCCCc
Q 012210 328 PYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLI 407 (468)
Q Consensus 328 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~D~i 407 (468)
..+......... ...+.......... ++....+.+|++|+|+++|++|.
T Consensus 267 ~~~~~~~~~~~g------------------~~~~~~~~~~~~~~------------~~~~~~~~~i~~P~Lii~G~~D~- 315 (386)
T 2jbw_A 267 PLTKESWKYVSK------------------VDTLEEARLHVHAA------------LETRDVLSQIACPTYILHGVHDE- 315 (386)
T ss_dssp HHHHHHHHHHTT------------------CSSHHHHHHHHHHH------------TCCTTTGGGCCSCEEEEEETTSS-
T ss_pred HHHHHHHHHHhC------------------CCCHHHHHHHHHHh------------CChhhhhcccCCCEEEEECCCCC-
Confidence 000000000000 00111111011111 11234577899999999999999
Q ss_pred CCHHHHHHHHHhC-CCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 408 CPPEAVEETVKLL-PEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 408 vp~~~~~~l~~~i-p~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
+|++.++++++.+ +. .++++++ ++++|.. .+ .++++++.|.+||+++.
T Consensus 316 v~~~~~~~l~~~l~~~-~~~~~~~--~~~gH~~-~~------~~~~~~~~i~~fl~~~l 364 (386)
T 2jbw_A 316 VPLSFVDTVLELVPAE-HLNLVVE--KDGDHCC-HN------LGIRPRLEMADWLYDVL 364 (386)
T ss_dssp SCTHHHHHHHHHSCGG-GEEEEEE--TTCCGGG-GG------GTTHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhcCC-CcEEEEe--CCCCcCC-cc------chHHHHHHHHHHHHHhc
Confidence 9999999999999 63 4588888 8888854 33 77899999999999874
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.58 E-value=3.1e-14 Score=151.37 Aligned_cols=204 Identities=17% Similarity=0.149 Sum_probs=136.7
Q ss_pred ccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcE
Q 012210 167 AIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKL 246 (468)
Q Consensus 167 ~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v 246 (468)
...+..+++.|+ .+||.|+++|+.+.++.... +...... ++ .... .+|+.++++++..+...+ ++
T Consensus 375 ~~~~~~~~~~l~---~~G~~v~~~d~rG~~~~G~s----~~~~~~~----~~-~~~~-~~d~~~~~~~l~~~~~~d--~i 439 (582)
T 3o4h_A 375 SDSWDTFAASLA---AAGFHVVMPNYRGSTGYGEE----WRLKIIG----DP-CGGE-LEDVSAAARWARESGLAS--EL 439 (582)
T ss_dssp CSSCCHHHHHHH---HTTCEEEEECCTTCSSSCHH----HHHTTTT----CT-TTHH-HHHHHHHHHHHHHTTCEE--EE
T ss_pred ccccCHHHHHHH---hCCCEEEEeccCCCCCCchh----HHhhhhh----hc-cccc-HHHHHHHHHHHHhCCCcc--eE
Confidence 455677888888 89999999999985432111 1111110 11 1222 399999999999875544 99
Q ss_pred EEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCC
Q 012210 247 LAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSS 326 (468)
Q Consensus 247 ~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (468)
+++||||||.+++.+|.++ |++++++|+++|..+.... ... .
T Consensus 440 ~l~G~S~GG~~a~~~a~~~-----p~~~~~~v~~~~~~~~~~~---------------------------~~~------~ 481 (582)
T 3o4h_A 440 YIMGYSYGGYMTLCALTMK-----PGLFKAGVAGASVVDWEEM---------------------------YEL------S 481 (582)
T ss_dssp EEEEETHHHHHHHHHHHHS-----TTTSSCEEEESCCCCHHHH---------------------------HHT------C
T ss_pred EEEEECHHHHHHHHHHhcC-----CCceEEEEEcCCccCHHHH---------------------------hhc------c
Confidence 9999999999999999997 8899999999885442100 000 0
Q ss_pred chhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecCCCC
Q 012210 327 PPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDL 406 (468)
Q Consensus 327 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~D~ 406 (468)
......+....+. .+.+.+. . ......+.++++|+|+++|++|.
T Consensus 482 ~~~~~~~~~~~~~----~~~~~~~--------------------~------------~sp~~~~~~i~~P~lii~G~~D~ 525 (582)
T 3o4h_A 482 DAAFRNFIEQLTG----GSREIMR--------------------S------------RSPINHVDRIKEPLALIHPQNAS 525 (582)
T ss_dssp CHHHHHHHHHHTT----TCHHHHH--------------------H------------TCGGGGGGGCCSCEEEEEETTCS
T ss_pred cchhHHHHHHHcC----cCHHHHH--------------------h------------cCHHHHHhcCCCCEEEEecCCCC
Confidence 0000011111110 0111100 0 01124567889999999999999
Q ss_pred cCCHHHHHHHHHhCCCC--ceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccC
Q 012210 407 ICPPEAVEETVKLLPED--LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 466 (468)
Q Consensus 407 ivp~~~~~~l~~~ip~~--~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~ 466 (468)
++|++.++++++.++.. ..+++++ |+++|..+.. +.++++++.+.+||+++..
T Consensus 526 ~v~~~~~~~~~~~l~~~g~~~~~~~~--~~~gH~~~~~-----~~~~~~~~~i~~fl~~~l~ 580 (582)
T 3o4h_A 526 RTPLKPLLRLMGELLARGKTFEAHII--PDAGHAINTM-----EDAVKILLPAVFFLATQRE 580 (582)
T ss_dssp SSCHHHHHHHHHHHHHTTCCEEEEEE--TTCCSSCCBH-----HHHHHHHHHHHHHHHHHHT
T ss_pred CcCHHHHHHHHHHHHhCCCCEEEEEE--CCCCCCCCCh-----HHHHHHHHHHHHHHHHHcC
Confidence 99999999999888752 3577777 9999988732 3778999999999998754
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.58 E-value=8.2e-15 Score=139.20 Aligned_cols=184 Identities=14% Similarity=0.111 Sum_probs=128.3
Q ss_pred ccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCC
Q 012210 165 AIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDG 244 (468)
Q Consensus 165 G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~ 244 (468)
|-...+..+++.|+ .+||.|+++|+.++.. .++.++. +|+.++++++..+.. .
T Consensus 77 ~~~~~~~~~~~~l~---~~G~~v~~~d~~~~~~--------------------~~~~~~~-~d~~~~~~~l~~~~~---~ 129 (262)
T 2pbl_A 77 FDKSSWSHLAVGAL---SKGWAVAMPSYELCPE--------------------VRISEIT-QQISQAVTAAAKEID---G 129 (262)
T ss_dssp CCGGGCGGGGHHHH---HTTEEEEEECCCCTTT--------------------SCHHHHH-HHHHHHHHHHHHHSC---S
T ss_pred CChHHHHHHHHHHH---hCCCEEEEeCCCCCCC--------------------CChHHHH-HHHHHHHHHHHHhcc---C
Confidence 44456677888888 8999999999866421 2455665 999999999998755 3
Q ss_pred cEEEEEEehhHHHHHHHHHhcCC-CCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCC
Q 012210 245 KLLAIGHSMGGILLYAMLSRCGF-EGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPL 323 (468)
Q Consensus 245 ~v~lvGhS~GG~ia~~~a~~~~~-~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (468)
+++++||||||.+++.+|.++.. ...+++++++|+++|..+..... .
T Consensus 130 ~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~~~~~-----------------------~--------- 177 (262)
T 2pbl_A 130 PIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLL-----------------------R--------- 177 (262)
T ss_dssp CEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGG-----------------------G---------
T ss_pred CEEEEEECHHHHHHHHHhccccccccccccceEEEEecCccCchHHH-----------------------h---------
Confidence 99999999999999999976300 00056799999999865532110 0
Q ss_pred CCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecC
Q 012210 324 SSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGD 403 (468)
Q Consensus 324 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~ 403 (468)
.++...+. ....... .. .....+.++++|+|+++|+
T Consensus 178 --------~~~~~~~~----~~~~~~~--------------------~~------------~~~~~~~~~~~P~lii~G~ 213 (262)
T 2pbl_A 178 --------TSMNEKFK----MDADAAI--------------------AE------------SPVEMQNRYDAKVTVWVGG 213 (262)
T ss_dssp --------STTHHHHC----CCHHHHH--------------------HT------------CGGGCCCCCSCEEEEEEET
T ss_pred --------hhhhhhhC----CCHHHHH--------------------hc------------CcccccCCCCCCEEEEEeC
Confidence 00000000 0111000 00 0113456789999999999
Q ss_pred CCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 012210 404 QDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 462 (468)
Q Consensus 404 ~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~ 462 (468)
+|.+++++.++.+.+.++ . +++++ ++++|+.+.+ .++.+...+.+++.
T Consensus 214 ~D~~~~~~~~~~~~~~~~-~--~~~~~--~~~~H~~~~~------~~~~~~~~l~~~l~ 261 (262)
T 2pbl_A 214 AERPAFLDQAIWLVEAWD-A--DHVIA--FEKHHFNVIE------PLADPESDLVAVIT 261 (262)
T ss_dssp TSCHHHHHHHHHHHHHHT-C--EEEEE--TTCCTTTTTG------GGGCTTCHHHHHHH
T ss_pred CCCcccHHHHHHHHHHhC-C--eEEEe--CCCCcchHHh------hcCCCCcHHHHHHh
Confidence 999999999999999998 4 88888 9999999987 66777777777663
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.57 E-value=1.2e-14 Score=137.18 Aligned_cols=182 Identities=18% Similarity=0.245 Sum_probs=125.9
Q ss_pred ccccccccccccccchhhHHHHHHhhhhcCceEecc--CccccccC-CccchHHHhhcccceEeecC-ChhhHHhhhHHH
Q 012210 155 SSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSP--QLFDLQER-LFSTIDDFQKQLDLIVQYDW-DFDHYLEEDVPA 230 (468)
Q Consensus 155 ~~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viap--dl~~~~~~-~~~~~~~l~~~~~~~~~~D~-~~~~~~~~D~~a 230 (468)
..++-.+++.|....+..+++.|+ .+|.|+++ |+.++++. |..... .+ .++. ++.+.. +|+.+
T Consensus 63 p~vv~~HG~~~~~~~~~~~~~~l~----~~~~v~~~~~d~~g~g~s~~~~~~~----~~----~~~~~~~~~~~-~~~~~ 129 (251)
T 2r8b_A 63 PLFVLLHGTGGDENQFFDFGARLL----PQATILSPVGDVSEHGAARFFRRTG----EG----VYDMVDLERAT-GKMAD 129 (251)
T ss_dssp CEEEEECCTTCCHHHHHHHHHHHS----TTSEEEEECCSEEETTEEESSCBCG----GG----CBCHHHHHHHH-HHHHH
T ss_pred cEEEEEeCCCCCHhHHHHHHHhcC----CCceEEEecCCcCCCCCcccccCCC----CC----cCCHHHHHHHH-HHHHH
Confidence 445666677777777777887777 46999999 67666432 110000 00 0110 123333 88888
Q ss_pred HHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCC
Q 012210 231 AMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPV 310 (468)
Q Consensus 231 ~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (468)
+++++..+.+.. +++++||||||.+++.+|.++ +++++++|++++......
T Consensus 130 ~l~~~~~~~~~~--~i~l~G~S~Gg~~a~~~a~~~-----p~~v~~~v~~~~~~~~~~---------------------- 180 (251)
T 2r8b_A 130 FIKANREHYQAG--PVIGLGFSNGANILANVLIEQ-----PELFDAAVLMHPLIPFEP---------------------- 180 (251)
T ss_dssp HHHHHHHHHTCC--SEEEEEETHHHHHHHHHHHHS-----TTTCSEEEEESCCCCSCC----------------------
T ss_pred HHHHHHhccCCC--cEEEEEECHHHHHHHHHHHhC-----CcccCeEEEEecCCCccc----------------------
Confidence 888887766444 999999999999999999987 788999999987543100
Q ss_pred cchHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCcccccccc
Q 012210 311 VPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHI 390 (468)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 390 (468)
. ...
T Consensus 181 ---------------------------------------------------------------~-------------~~~ 184 (251)
T 2r8b_A 181 ---------------------------------------------------------------K-------------ISP 184 (251)
T ss_dssp ---------------------------------------------------------------C-------------CCC
T ss_pred ---------------------------------------------------------------c-------------ccc
Confidence 0 112
Q ss_pred CccCccEEEEecCCCCcCCHHHHHHHHHhCC--CCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccCC
Q 012210 391 HKCNIPILAIAGDQDLICPPEAVEETVKLLP--EDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDSV 467 (468)
Q Consensus 391 ~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip--~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~~ 467 (468)
..+++|+|+++|++|.++|++.++.+.+.++ +...++ .+ ++++|..+.+ . .+.+.+||+++...
T Consensus 185 ~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~-~~--~~~gH~~~~~------~----~~~~~~~l~~~l~~ 250 (251)
T 2r8b_A 185 AKPTRRVLITAGERDPICPVQLTKALEESLKAQGGTVET-VW--HPGGHEIRSG------E----IDAVRGFLAAYGGG 250 (251)
T ss_dssp CCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSSEEEE-EE--ESSCSSCCHH------H----HHHHHHHHGGGC--
T ss_pred cccCCcEEEeccCCCccCCHHHHHHHHHHHHHcCCeEEE-Ee--cCCCCccCHH------H----HHHHHHHHHHhcCC
Confidence 3468999999999999999999999999998 443333 44 6788888764 2 46788888877543
|
| >4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp} | Back alignment and structure |
|---|
Probab=99.57 E-value=2.4e-14 Score=145.43 Aligned_cols=102 Identities=14% Similarity=0.110 Sum_probs=74.2
Q ss_pred ccccccccccccchhhHHHHHHhhhhc---------CceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhh
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEE---------GQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEED 227 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~---------Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D 227 (468)
++-.|++.|-...+..+...|+ .. ||.|++||+.|++..-... ...+++.+++ +|
T Consensus 95 lll~HG~~~s~~~~~~~~~~L~---~~~~~~~~~~~~~~vi~~dl~G~G~S~~~~------------~~~~~~~~~a-~~ 158 (388)
T 4i19_A 95 MVITHGWPGTPVEFLDIIGPLT---DPRAHGGDPADAFHLVIPSLPGFGLSGPLK------------SAGWELGRIA-MA 158 (388)
T ss_dssp EEEECCTTCCGGGGHHHHHHHH---CGGGGTSCGGGCEEEEEECCTTSGGGCCCS------------SCCCCHHHHH-HH
T ss_pred EEEECCCCCCHHHHHHHHHHHh---CcccccCCCCCCeEEEEEcCCCCCCCCCCC------------CCCCCHHHHH-HH
Confidence 4454555555555666677776 54 9999999999997631110 1144677776 77
Q ss_pred HHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccc
Q 012210 228 VPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 228 ~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
+.++++.+ +.. +++++||||||.+++.+|.++ |++|+++|++++...
T Consensus 159 ~~~l~~~l----g~~--~~~l~G~S~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~ 205 (388)
T 4i19_A 159 WSKLMASL----GYE--RYIAQGGDIGAFTSLLLGAID-----PSHLAGIHVNLLQTN 205 (388)
T ss_dssp HHHHHHHT----TCS--SEEEEESTHHHHHHHHHHHHC-----GGGEEEEEESSCCCC
T ss_pred HHHHHHHc----CCC--cEEEEeccHHHHHHHHHHHhC-----hhhceEEEEecCCCC
Confidence 77777665 333 899999999999999999998 999999999986443
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.57 E-value=2.6e-14 Score=147.80 Aligned_cols=222 Identities=16% Similarity=0.176 Sum_probs=131.1
Q ss_pred cccccc-chhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCC
Q 012210 163 SSAIAI-QIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKP 241 (468)
Q Consensus 163 ~~G~~~-~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~ 241 (468)
.||... ..+..++.|+ .+||.|+++|++++++... ... ....+|+.++++++..+...
T Consensus 180 lhG~~~~~~~~~a~~La---~~Gy~Vla~D~rG~~~~~~-----------~~~-------~~~~~d~~~a~~~l~~~~~v 238 (446)
T 3hlk_A 180 MFGTGGGLLEYRASLLA---GKGFAVMALAYYNYEDLPK-----------TME-------TLHLEYFEEAMNYLLSHPEV 238 (446)
T ss_dssp ECCSSCSCCCHHHHHHH---TTTCEEEEECCSSSTTSCS-----------CCS-------EEEHHHHHHHHHHHHTSTTB
T ss_pred ECCCCcchhhHHHHHHH---hCCCEEEEeccCCCCCCCc-----------chh-------hCCHHHHHHHHHHHHhCCCC
Confidence 455554 4566688888 8999999999999754210 000 01138889999999988766
Q ss_pred CCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhc
Q 012210 242 KDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAY 321 (468)
Q Consensus 242 ~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (468)
+.++++++||||||.+++.+|.++ ++ |+++|+++++............ ...+..+...
T Consensus 239 d~~~i~l~G~S~GG~lAl~~A~~~-----p~-v~a~V~~~~~~~~~~~~~~~~~----------~~~~~~~~~~------ 296 (446)
T 3hlk_A 239 KGPGVGLLGISKGGELCLSMASFL-----KG-ITAAVVINGSVANVGGTLRYKG----------ETLPPVGVNR------ 296 (446)
T ss_dssp CCSSEEEEEETHHHHHHHHHHHHC-----SC-EEEEEEESCCSBCCSSEEEETT----------EEECCCCBCG------
T ss_pred CCCCEEEEEECHHHHHHHHHHHhC-----CC-ceEEEEEcCcccccCCCccccC----------ccCCccccch------
Confidence 556999999999999999999985 44 9999999886543322100000 0000000000
Q ss_pred CCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEe
Q 012210 322 PLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIA 401 (468)
Q Consensus 322 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~ 401 (468)
.. .......... +...+.. + .. .........+.++++|+|+|+
T Consensus 297 ----------~~--~~~~~~~~~~-------~~~~~~~-~---------------~~--~~~~~~~~~~~~i~~PvLii~ 339 (446)
T 3hlk_A 297 ----------NR--IKVTKDGYAD-------IVDVLNS-P---------------LE--GPDQKSFIPVERAESTFLFLV 339 (446)
T ss_dssp ----------GG--CEECSSSCEE-------CTTCBCC-T---------------TS--GGGGGGBCCGGGCCSEEEEEE
T ss_pred ----------hc--cccccchHHH-------HHHHHhc-h---------------hh--ccccccccCHHHCCCCEEEEE
Confidence 00 0000000000 0000000 0 00 000011234778999999999
Q ss_pred cCCCCcCCHHH-HHHHHHhCCCC--c-eeEEEecCCCCCCCCcccc----------------c------ccccchhhHHH
Q 012210 402 GDQDLICPPEA-VEETVKLLPED--L-VTYKVFGEPSGPHYAHYDL----------------V------GGRMAVEQVYP 455 (468)
Q Consensus 402 G~~D~ivp~~~-~~~l~~~ip~~--~-~~~~v~~~~~agH~~H~e~----------------~------~~~~~pe~v~~ 455 (468)
|++|.++|++. ++.+.+.++.. . .+++++ |+++|.....+ . ....+++++++
T Consensus 340 G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~~--pgagH~~~~p~~P~~~~~~~~~~~~~~~~gG~~~~~~~a~~~~~~ 417 (446)
T 3hlk_A 340 GQDDHNWKSEFYANEACKRLQAHGRRKPQIICY--PETGHYIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWK 417 (446)
T ss_dssp ETTCCSSCHHHHHHHHHHHHHHTTCCCCEEEEE--TTBCSCCCSTTCCCCCBC-------CBBCCBCHHHHHHHHHHHHH
T ss_pred eCCCCCcChHHHHHHHHHHHHHcCCCCcEEEEE--CCCCCeECCCCCCCChhhcccccCceEeeCCccHHHHHHHHHHHH
Confidence 99999999943 45666555431 2 477777 99999873211 0 11235788999
Q ss_pred HHHHHHhhccC
Q 012210 456 CIVQFLGRYDS 466 (468)
Q Consensus 456 ~I~~FL~~~~~ 466 (468)
.|.+||+++..
T Consensus 418 ~i~~Fl~~~L~ 428 (446)
T 3hlk_A 418 QLQTFFHKHLG 428 (446)
T ss_dssp HHHHHHHHHC-
T ss_pred HHHHHHHHhhC
Confidence 99999998853
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.57 E-value=2.6e-14 Score=155.95 Aligned_cols=196 Identities=17% Similarity=0.139 Sum_probs=133.7
Q ss_pred hHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEE
Q 012210 172 DLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGH 251 (468)
Q Consensus 172 ~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGh 251 (468)
.+++.|+ .+||.|+++|+.|++.... .+..... . .+.....+|+.++++++..+...+..+++++||
T Consensus 543 ~~~~~l~---~~G~~v~~~d~rG~g~s~~----~~~~~~~----~--~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~ 609 (741)
T 2ecf_A 543 LFNQYLA---QQGYVVFSLDNRGTPRRGR----DFGGALY----G--KQGTVEVADQLRGVAWLKQQPWVDPARIGVQGW 609 (741)
T ss_dssp HHHHHHH---HTTCEEEEECCTTCSSSCH----HHHHTTT----T--CTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEE
T ss_pred HHHHHHH---hCCCEEEEEecCCCCCCCh----hhhHHHh----h--hcccccHHHHHHHHHHHHhcCCCChhhEEEEEE
Confidence 5788888 8999999999999866211 1111110 0 122223499999999998864333358999999
Q ss_pred ehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCchhHH
Q 012210 252 SMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVF 331 (468)
Q Consensus 252 S~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (468)
||||.+++.+|.++ |++++++|+++|..+..... .
T Consensus 610 S~GG~~a~~~a~~~-----p~~~~~~v~~~~~~~~~~~~------------------------~---------------- 644 (741)
T 2ecf_A 610 SNGGYMTLMLLAKA-----SDSYACGVAGAPVTDWGLYD------------------------S---------------- 644 (741)
T ss_dssp THHHHHHHHHHHHC-----TTTCSEEEEESCCCCGGGSB------------------------H----------------
T ss_pred ChHHHHHHHHHHhC-----CCceEEEEEcCCCcchhhhc------------------------c----------------
Confidence 99999999999987 78999999998865421100 0
Q ss_pred HHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecCCCCcCCHH
Q 012210 332 SWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPE 411 (468)
Q Consensus 332 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~D~ivp~~ 411 (468)
.+...+..... ...+. +.. . +....+.+|++|+|+++|++|.++|++
T Consensus 645 ~~~~~~~~~~~-~~~~~-------------------~~~-~------------~~~~~~~~i~~P~lii~G~~D~~v~~~ 691 (741)
T 2ecf_A 645 HYTERYMDLPA-RNDAG-------------------YRE-A------------RVLTHIEGLRSPLLLIHGMADDNVLFT 691 (741)
T ss_dssp HHHHHHHCCTG-GGHHH-------------------HHH-H------------CSGGGGGGCCSCEEEEEETTCSSSCTH
T ss_pred ccchhhcCCcc-cChhh-------------------hhh-c------------CHHHHHhhCCCCEEEEccCCCCCCCHH
Confidence 00000000000 00000 000 0 112356788999999999999999999
Q ss_pred HHHHHHHhCCCC--ceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccC
Q 012210 412 AVEETVKLLPED--LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 466 (468)
Q Consensus 412 ~~~~l~~~ip~~--~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~ 466 (468)
.++.+++.++.. .++++++ ++++|..+.+ .++++++.|.+||+++.+
T Consensus 692 ~~~~~~~~l~~~~~~~~~~~~--~~~~H~~~~~------~~~~~~~~i~~fl~~~l~ 740 (741)
T 2ecf_A 692 NSTSLMSALQKRGQPFELMTY--PGAKHGLSGA------DALHRYRVAEAFLGRCLK 740 (741)
T ss_dssp HHHHHHHHHHHTTCCCEEEEE--TTCCSSCCHH------HHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCceEEEEE--CCCCCCCCCC------chhHHHHHHHHHHHHhcC
Confidence 999999888654 3477777 9999998876 558899999999998764
|
| >3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.57 E-value=3.1e-14 Score=135.65 Aligned_cols=209 Identities=16% Similarity=0.187 Sum_probs=135.1
Q ss_pred ccccccccchhhHHHHHHhhhhcC---ceEeccCccccccC-CccchHHHhhcccceEeecC------ChhhHHhhhHHH
Q 012210 161 RQSSAIAIQIRDLSQNLVNMIEEG---QLSVSPQLFDLQER-LFSTIDDFQKQLDLIVQYDW------DFDHYLEEDVPA 230 (468)
Q Consensus 161 ~~~~G~~~~i~~~a~~la~~l~~G---y~viapdl~~~~~~-~~~~~~~l~~~~~~~~~~D~------~~~~~~~~D~~a 230 (468)
|++.|-...+..+++.|+ .+| ++|+.+|+..++.. +.+....-.........++. ++++++ +++.+
T Consensus 11 HG~~~~~~~~~~~~~~L~---~~~~~~~~vi~~~v~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~a-~~l~~ 86 (250)
T 3lp5_A 11 PGSSASQNRFDSLITELG---KETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANIDKQA-VWLNT 86 (250)
T ss_dssp CCCGGGHHHHHHHHHHHH---HHSSSCCCEEEEEECTTSCEEEEECCCTTCSSCEEEEEESCCCCSHHHHHHHH-HHHHH
T ss_pred CCCCCCHHHHHHHHHHHH---hcCCCCceEEEEEEecCCeEEEeeecCCCCcCCeEEEEeccCCCcccCHHHHH-HHHHH
Confidence 455555566677888887 776 78888877766531 11111100001111111221 355665 99999
Q ss_pred HHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCC
Q 012210 231 AMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPV 310 (468)
Q Consensus 231 ~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (468)
+++++..+++.. ++++|||||||.++..|+..|+....+++|+++|+++++.......
T Consensus 87 ~~~~l~~~~~~~--~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~~-------------------- 144 (250)
T 3lp5_A 87 AFKALVKTYHFN--HFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMESTS-------------------- 144 (250)
T ss_dssp HHHHHHTTSCCS--EEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCCC--------------------
T ss_pred HHHHHHHHcCCC--CeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCccccc--------------------
Confidence 999999988776 9999999999999999999874322356899999999876543210
Q ss_pred cchHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCcccccccc
Q 012210 311 VPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHI 390 (468)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 390 (468)
+.. .. ..+..+... ...+
T Consensus 145 -----------~~~-------------------~~-----------------~~~~~l~~~---------------~~~l 162 (250)
T 3lp5_A 145 -----------TTA-------------------KT-----------------SMFKELYRY---------------RTGL 162 (250)
T ss_dssp -----------SSC-------------------CC-----------------HHHHHHHHT---------------GGGS
T ss_pred -----------ccc-------------------cC-----------------HHHHHHHhc---------------cccC
Confidence 000 00 000111110 1223
Q ss_pred CccCccEEEEecC----CCCcCCHHHHHHHHHhCCCCceeEEEe--cCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 391 HKCNIPILAIAGD----QDLICPPEAVEETVKLLPEDLVTYKVF--GEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 391 ~~I~vPvLiI~G~----~D~ivp~~~~~~l~~~ip~~~~~~~v~--~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
.+ ++|+|+|+|+ .|.++|.+.+..+...+++....+..+ ..++++|..+.+ .+ +|.+.|.+||.+.
T Consensus 163 p~-~vpvl~I~G~~~~~~Dg~Vp~~sa~~l~~l~~~~~~~~~~~~v~g~~a~H~~l~e------~~-~v~~~I~~FL~~~ 234 (250)
T 3lp5_A 163 PE-SLTVYSIAGTENYTSDGTVPYNSVNYGKYIFQDQVKHFTEITVTGANTAHSDLPQ------NK-QIVSLIRQYLLAE 234 (250)
T ss_dssp CT-TCEEEEEECCCCCCTTTBCCHHHHTTHHHHHTTTSSEEEEEECTTTTBSSCCHHH------HH-HHHHHHHHHTSCC
T ss_pred CC-CceEEEEEecCCCCCCceeeHHHHHHHHHHhcccccceEEEEEeCCCCchhcchh------CH-HHHHHHHHHHhcc
Confidence 33 7999999999 999999999999888887643344333 224566888776 55 8999999999865
Q ss_pred c
Q 012210 465 D 465 (468)
Q Consensus 465 ~ 465 (468)
.
T Consensus 235 ~ 235 (250)
T 3lp5_A 235 T 235 (250)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* | Back alignment and structure |
|---|
Probab=99.56 E-value=1.1e-13 Score=134.25 Aligned_cols=228 Identities=16% Similarity=0.103 Sum_probs=131.2
Q ss_pred cccccccccccc-ccchhhHHHHHHhhhhcCceEeccCccccccCCccchHH-HhhcccceE----eecCChhhHHhhhH
Q 012210 155 SSLLERRQSSAI-AIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDD-FQKQLDLIV----QYDWDFDHYLEEDV 228 (468)
Q Consensus 155 ~~ll~~~~~~G~-~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~-l~~~~~~~~----~~D~~~~~~~~~D~ 228 (468)
+.++-.|+..|. ........ .++ .+||.|+++|+.+++......... -...++... .-+|.+.... +|+
T Consensus 83 p~vv~~HG~~~~~~~~~~~~~-~l~---~~g~~v~~~d~rg~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~D~ 157 (318)
T 1l7a_A 83 PAIVKYHGYNASYDGEIHEMV-NWA---LHGYATFGMLVRGQQRSEDTSISPHGHALGWMTKGILDKDTYYYRGVY-LDA 157 (318)
T ss_dssp EEEEEECCTTCCSGGGHHHHH-HHH---HTTCEEEEECCTTTSSSCCCCCCSSCCSSSSTTTTTTCTTTCHHHHHH-HHH
T ss_pred cEEEEEcCCCCCCCCCccccc-chh---hCCcEEEEecCCCCCCCCCcccccCCccccceeccCCCHHHHHHHHHH-HHH
Confidence 345554444444 33333333 555 889999999999986532110000 000000000 0112234555 999
Q ss_pred HHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCC
Q 012210 229 PAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNV 308 (468)
Q Consensus 229 ~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (468)
.++++++..+...+..+++++|||+||.+++.+|..+ +++.++|+++|....... ... ..
T Consensus 158 ~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~------~~~~~~v~~~p~~~~~~~--~~~-~~----------- 217 (318)
T 1l7a_A 158 VRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALS------DIPKAAVADYPYLSNFER--AID-VA----------- 217 (318)
T ss_dssp HHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHC------SCCSEEEEESCCSCCHHH--HHH-HC-----------
T ss_pred HHHHHHHHhCCCcccceeEEEecChHHHHHHHHhccC------CCccEEEecCCcccCHHH--HHh-cC-----------
Confidence 9999999987544335899999999999999999984 458888887764321100 000 00
Q ss_pred CCcchHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCcccccc
Q 012210 309 PVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKD 388 (468)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (468)
...... .+..++... . .+.. ......... .++...
T Consensus 218 -------------~~~~~~-~~~~~~~~~----~--~~~~----------------~~~~~~~~~---------~~~~~~ 252 (318)
T 1l7a_A 218 -------------LEQPYL-EINSFFRRN----G--SPET----------------EVQAMKTLS---------YFDIMN 252 (318)
T ss_dssp -------------CSTTTT-HHHHHHHHS----C--CHHH----------------HHHHHHHHH---------TTCHHH
T ss_pred -------------CcCccH-HHHHHHhcc----C--Cccc----------------HHHHHHhhc---------cccHHH
Confidence 000000 000111100 0 0000 001111110 011223
Q ss_pred ccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 389 HIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 389 ~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
.+.++++|+|+++|+.|.++|++.+..+.+.++. .++++++ ++++|... .++.+.+.+||+++.
T Consensus 253 ~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~-~~~~~~~--~~~~H~~~----------~~~~~~~~~fl~~~l 316 (318)
T 1l7a_A 253 LADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLET-KKELKVY--RYFGHEYI----------PAFQTEKLAFFKQIL 316 (318)
T ss_dssp HGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCS-SEEEEEE--TTCCSSCC----------HHHHHHHHHHHHHHH
T ss_pred HHhhCCCCEEEEeccCCCCCCcccHHHHHhhcCC-CeeEEEc--cCCCCCCc----------chhHHHHHHHHHHHh
Confidence 4677899999999999999999999999999987 3688887 88888822 456788888888764
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=3.2e-14 Score=154.41 Aligned_cols=193 Identities=13% Similarity=0.144 Sum_probs=131.3
Q ss_pred HHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEe
Q 012210 173 LSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHS 252 (468)
Q Consensus 173 ~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS 252 (468)
+++.|+ .+||.|+++|+.|++.... .+..... .+ +.....+|+.++++++......+..+++++|||
T Consensus 511 ~~~~la---~~G~~v~~~d~rG~g~s~~----~~~~~~~----~~--~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S 577 (706)
T 2z3z_A 511 WDIYMA---QKGYAVFTVDSRGSANRGA----AFEQVIH----RR--LGQTEMADQMCGVDFLKSQSWVDADRIGVHGWS 577 (706)
T ss_dssp HHHHHH---HTTCEEEEECCTTCSSSCH----HHHHTTT----TC--TTHHHHHHHHHHHHHHHTSTTEEEEEEEEEEET
T ss_pred HHHHHH---hCCcEEEEEecCCCcccch----hHHHHHh----hc--cCCccHHHHHHHHHHHHhCCCCCchheEEEEEC
Confidence 678888 8999999999999865311 1111111 11 112223899999999976543333589999999
Q ss_pred hhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCchhHHH
Q 012210 253 MGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFS 332 (468)
Q Consensus 253 ~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (468)
|||.+++.+|.++ |++++++|+++|..+..... . .
T Consensus 578 ~GG~~a~~~a~~~-----p~~~~~~v~~~~~~~~~~~~------------------------~----------------~ 612 (706)
T 2z3z_A 578 YGGFMTTNLMLTH-----GDVFKVGVAGGPVIDWNRYA------------------------I----------------M 612 (706)
T ss_dssp HHHHHHHHHHHHS-----TTTEEEEEEESCCCCGGGSB------------------------H----------------H
T ss_pred hHHHHHHHHHHhC-----CCcEEEEEEcCCccchHHHH------------------------h----------------h
Confidence 9999999999987 88999999998865421100 0 0
Q ss_pred HHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecCCCCcCCHHH
Q 012210 333 WLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEA 412 (468)
Q Consensus 333 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~D~ivp~~~ 412 (468)
+...+...+. ..++. +... .....+.++++|+|+++|++|.++|++.
T Consensus 613 ~~~~~~~~~~-~~~~~-------------------~~~~-------------~~~~~~~~i~~P~lii~G~~D~~v~~~~ 659 (706)
T 2z3z_A 613 YGERYFDAPQ-ENPEG-------------------YDAA-------------NLLKRAGDLKGRLMLIHGAIDPVVVWQH 659 (706)
T ss_dssp HHHHHHCCTT-TCHHH-------------------HHHH-------------CGGGGGGGCCSEEEEEEETTCSSSCTHH
T ss_pred hhhhhcCCcc-cChhh-------------------hhhC-------------CHhHhHHhCCCCEEEEeeCCCCCCCHHH
Confidence 0000000000 01111 0000 1124567889999999999999999999
Q ss_pred HHHHHHhCCCC--ceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 413 VEETVKLLPED--LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 413 ~~~l~~~ip~~--~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
++++++.+++. ..+++++ |+++|..+.+ .++.+++.|.+||+++
T Consensus 660 ~~~~~~~l~~~~~~~~~~~~--~~~gH~~~~~------~~~~~~~~i~~fl~~~ 705 (706)
T 2z3z_A 660 SLLFLDACVKARTYPDYYVY--PSHEHNVMGP------DRVHLYETITRYFTDH 705 (706)
T ss_dssp HHHHHHHHHHHTCCCEEEEE--TTCCSSCCTT------HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCeEEEEe--CCCCCCCCcc------cHHHHHHHHHHHHHHh
Confidence 99998887632 3477777 9999998876 7889999999999876
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=4.3e-14 Score=135.24 Aligned_cols=201 Identities=13% Similarity=0.132 Sum_probs=125.8
Q ss_pred ccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhc---
Q 012210 163 SSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQS--- 239 (468)
Q Consensus 163 ~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~--- 239 (468)
..|-......+++.|+ .+||.|+++|+.+++.. .. .+.... +|+.++++++....
T Consensus 47 ~~~~~~~~~~~~~~l~---~~G~~v~~~d~~g~g~~-----------~~-------~~~~~~-~d~~~~~~~l~~~~~~~ 104 (277)
T 3bxp_A 47 TYHSGREEAPIATRMM---AAGMHTVVLNYQLIVGD-----------QS-------VYPWAL-QQLGATIDWITTQASAH 104 (277)
T ss_dssp TSCCCTTHHHHHHHHH---HTTCEEEEEECCCSTTT-----------CC-------CTTHHH-HHHHHHHHHHHHHHHHH
T ss_pred ccCCCccchHHHHHHH---HCCCEEEEEecccCCCC-----------Cc-------cCchHH-HHHHHHHHHHHhhhhhc
Confidence 3344556677888888 89999999999886520 00 122333 78888888887653
Q ss_pred CCCCCcEEEEEEehhHHHHHHHHHhcCCC---------CCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCC
Q 012210 240 KPKDGKLLAIGHSMGGILLYAMLSRCGFE---------GRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPV 310 (468)
Q Consensus 240 ~~~~~~v~lvGhS~GG~ia~~~a~~~~~~---------~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (468)
+.+..+++++||||||.+++.+|.++... ..+.+++++|+++|..+..... .
T Consensus 105 ~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~~~---------~---------- 165 (277)
T 3bxp_A 105 HVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAIILGYPVIDLTAGF---------P---------- 165 (277)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSEEEEESCCCBTTSSS---------S----------
T ss_pred CCChhheEEEEeCHHHHHHHHHHhhccCcccccccCcccccCCcCEEEEeCCcccCCCCC---------C----------
Confidence 22234899999999999999999874110 0156799999998865432110 0
Q ss_pred cchHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHH-HHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccc
Q 012210 311 VPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLK-KLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDH 389 (468)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (468)
....+. .++ . . . ...+....
T Consensus 166 ----------------------------------~~~~~~~~~~----~------------~-----~----~~~~~~~~ 186 (277)
T 3bxp_A 166 ----------------------------------TTSAARNQIT----T------------D-----A----RLWAAQRL 186 (277)
T ss_dssp ----------------------------------SSHHHHHHHC----S------------C-----G----GGSBGGGG
T ss_pred ----------------------------------Cccccchhcc----c------------h-----h----hhcCHhhc
Confidence 000000 000 0 0 0 01112234
Q ss_pred cCccCccEEEEecCCCCcCCHHHHHHHHHhCCCC--ceeEEEecCCCCCCCCccccc-cc--------ccchhhHHHHHH
Q 012210 390 IHKCNIPILAIAGDQDLICPPEAVEETVKLLPED--LVTYKVFGEPSGPHYAHYDLV-GG--------RMAVEQVYPCIV 458 (468)
Q Consensus 390 l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~--~~~~~v~~~~~agH~~H~e~~-~~--------~~~pe~v~~~I~ 458 (468)
+.++.+|+|+++|++|.++|++.++.+.+.++.. .++++++ ++++|......- .. ....+++.+.+.
T Consensus 187 ~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~--~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (277)
T 3bxp_A 187 VTPASKPAFVWQTATDESVPPINSLKYVQAMLQHQVATAYHLF--GSGIHGLALANHVTQKPGKDKYLNDQAAIWPQLAL 264 (277)
T ss_dssp CCTTSCCEEEEECTTCCCSCTHHHHHHHHHHHHTTCCEEEEEC--CCC----------------CHHHHHHHHHHHHHHH
T ss_pred cccCCCCEEEEeeCCCCccChHHHHHHHHHHHHCCCeEEEEEe--CCCCcccccccccccCccccccccchHHHHHHHHH
Confidence 5678899999999999999999999888877543 4577777 889995443210 00 023578899999
Q ss_pred HHHhhcc
Q 012210 459 QFLGRYD 465 (468)
Q Consensus 459 ~FL~~~~ 465 (468)
+||+++.
T Consensus 265 ~fl~~~~ 271 (277)
T 3bxp_A 265 RWLQEQG 271 (277)
T ss_dssp HHHHHTT
T ss_pred HHHHhcc
Confidence 9998774
|
| >2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.56 E-value=3.9e-14 Score=140.87 Aligned_cols=83 Identities=17% Similarity=0.239 Sum_probs=62.6
Q ss_pred hhHHHHHHhhhhcCceEeccCc----cccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcE
Q 012210 171 RDLSQNLVNMIEEGQLSVSPQL----FDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKL 246 (468)
Q Consensus 171 ~~~a~~la~~l~~Gy~viapdl----~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v 246 (468)
..+++.| ..||+|+++|+ .|++.. +..... +|+.++++++....+.. ++
T Consensus 58 ~~l~~~L----~~g~~Vi~~Dl~~D~~G~G~S--------------------~~~~~~-~d~~~~~~~l~~~l~~~--~~ 110 (335)
T 2q0x_A 58 TNLAEEL----QGDWAFVQVEVPSGKIGSGPQ--------------------DHAHDA-EDVDDLIGILLRDHCMN--EV 110 (335)
T ss_dssp HHHHHHH----TTTCEEEEECCGGGBTTSCSC--------------------CHHHHH-HHHHHHHHHHHHHSCCC--CE
T ss_pred HHHHHHH----HCCcEEEEEeccCCCCCCCCc--------------------cccCcH-HHHHHHHHHHHHHcCCC--cE
Confidence 4455444 58999999866 444331 122344 88899999988766655 99
Q ss_pred EEEEEehhHHHHHHHHH--hcCCCCCcccccceeEEccccc
Q 012210 247 LAIGHSMGGILLYAMLS--RCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 247 ~lvGhS~GG~ia~~~a~--~~~~~~~p~~V~~lVllap~~~ 285 (468)
+|+||||||.+++.+|. .+ |++|+++|++++...
T Consensus 111 ~LvGhSmGG~iAl~~A~~~~~-----p~rV~~lVL~~~~~~ 146 (335)
T 2q0x_A 111 ALFATSTGTQLVFELLENSAH-----KSSITRVILHGVVCD 146 (335)
T ss_dssp EEEEEGGGHHHHHHHHHHCTT-----GGGEEEEEEEEECCC
T ss_pred EEEEECHhHHHHHHHHHhccc-----hhceeEEEEECCccc
Confidence 99999999999999998 34 889999999987543
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.56 E-value=1.8e-14 Score=138.62 Aligned_cols=191 Identities=15% Similarity=0.103 Sum_probs=125.6
Q ss_pred cchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhc---CCCCC
Q 012210 168 IQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQS---KPKDG 244 (468)
Q Consensus 168 ~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~---~~~~~ 244 (468)
..+..+++.|+ .+||.|+++|+.+.+... ..+.... .|+.++++++.... +.+..
T Consensus 67 ~~~~~~~~~l~---~~G~~v~~~d~~g~~~~~------------------~~~~~~~-~d~~~~~~~l~~~~~~~~~~~~ 124 (283)
T 3bjr_A 67 AQAESLAMAFA---GHGYQAFYLEYTLLTDQQ------------------PLGLAPV-LDLGRAVNLLRQHAAEWHIDPQ 124 (283)
T ss_dssp HHHHHHHHHHH---TTTCEEEEEECCCTTTCS------------------SCBTHHH-HHHHHHHHHHHHSHHHHTEEEE
T ss_pred cccHHHHHHHH---hCCcEEEEEeccCCCccc------------------cCchhHH-HHHHHHHHHHHHHHHHhCCCcc
Confidence 44677888888 899999999998864410 0122333 78888888887643 23234
Q ss_pred cEEEEEEehhHHHHHHHHHhcCCCCCccc-------------ccceeEEccccccCCchhhHHhhcccCchhhhcCCCCc
Q 012210 245 KLLAIGHSMGGILLYAMLSRCGFEGRESR-------------LAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVV 311 (468)
Q Consensus 245 ~v~lvGhS~GG~ia~~~a~~~~~~~~p~~-------------V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (468)
+++++||||||.+++.+|.++ +++ ++++|+++|..+......
T Consensus 125 ~i~l~G~S~Gg~~a~~~a~~~-----~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~~~~-------------------- 179 (283)
T 3bjr_A 125 QITPAGFSVGGHIVALYNDYW-----ATRVATELNVTPAMLKPNNVVLGYPVISPLLGFP-------------------- 179 (283)
T ss_dssp EEEEEEETHHHHHHHHHHHHT-----TTHHHHHHTCCHHHHCCSSEEEESCCCCTTSBC---------------------
T ss_pred cEEEEEECHHHHHHHHHHhhc-----cccchhhcCCCcCCCCccEEEEcCCccccccccc--------------------
Confidence 899999999999999999986 544 888998887654321100
Q ss_pred chHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccC
Q 012210 312 PLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIH 391 (468)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 391 (468)
.. ...+ ...+. .. ...+....+.
T Consensus 180 -~~-------------------------------~~~~----~~~~~-----------------~~----~~~~~~~~~~ 202 (283)
T 3bjr_A 180 -KD-------------------------------DATL----ATWTP-----------------TP----NELAADQHVN 202 (283)
T ss_dssp -------------------------------------------CCCC-----------------CG----GGGCGGGSCC
T ss_pred -cc-------------------------------cchH----HHHHH-----------------Hh----HhcCHHHhcc
Confidence 00 0000 00000 00 0111234567
Q ss_pred ccCccEEEEecCCCCcCCHHHHHHHHHhCCCC--ceeEEEecCCCCCCCCcccccc-------cccchhhHHHHHHHHHh
Q 012210 392 KCNIPILAIAGDQDLICPPEAVEETVKLLPED--LVTYKVFGEPSGPHYAHYDLVG-------GRMAVEQVYPCIVQFLG 462 (468)
Q Consensus 392 ~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~--~~~~~v~~~~~agH~~H~e~~~-------~~~~pe~v~~~I~~FL~ 462 (468)
++++|+|+++|++|.++|++.+..+.+.+++. .++++++ ++++|..+.+... .....+++.+.+.+||+
T Consensus 203 ~~~~P~lii~G~~D~~~p~~~~~~~~~~l~~~g~~~~~~~~--~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~ 280 (283)
T 3bjr_A 203 SDNQPTFIWTTADDPIVPATNTLAYATALATAKIPYELHVF--KHGPHGLALANAQTAWKPDANQPHVAHWLTLALEWLA 280 (283)
T ss_dssp TTCCCEEEEEESCCTTSCTHHHHHHHHHHHHTTCCEEEEEE--CCCSHHHHHHHHHHSCC-------CCHHHHHHHHHHH
T ss_pred CCCCCEEEEEcCCCCCCChHHHHHHHHHHHHCCCCeEEEEe--CCCCcccccccccccccccccchhHHHHHHHHHHHHh
Confidence 78999999999999999999999998887643 4577777 8888865554100 00123788899999998
Q ss_pred hc
Q 012210 463 RY 464 (468)
Q Consensus 463 ~~ 464 (468)
++
T Consensus 281 ~~ 282 (283)
T 3bjr_A 281 DN 282 (283)
T ss_dssp HT
T ss_pred hc
Confidence 75
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=6.3e-14 Score=129.98 Aligned_cols=191 Identities=15% Similarity=0.135 Sum_probs=125.5
Q ss_pred ccccccccccccccchhhHHHHHHhhhh--cCceEeccCccccccCCc---cchHHHhhccc--ceEeecCChhhHHhhh
Q 012210 155 SSLLERRQSSAIAIQIRDLSQNLVNMIE--EGQLSVSPQLFDLQERLF---STIDDFQKQLD--LIVQYDWDFDHYLEED 227 (468)
Q Consensus 155 ~~ll~~~~~~G~~~~i~~~a~~la~~l~--~Gy~viapdl~~~~~~~~---~~~~~l~~~~~--~~~~~D~~~~~~~~~D 227 (468)
..++-.+.+.+-...+..+++.|+ . .||.|++||+.++..... .....+...++ ......+++.+++ ++
T Consensus 25 ~~vv~lHG~~~~~~~~~~~~~~l~---~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~~~~~~~~~~-~~ 100 (226)
T 3cn9_A 25 ACIIWLHGLGADRTDFKPVAEALQ---MVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPARAIDEDQLNASA-DQ 100 (226)
T ss_dssp EEEEEECCTTCCGGGGHHHHHHHH---HHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSSTTCBCHHHHHHHH-HH
T ss_pred CEEEEEecCCCChHHHHHHHHHHh---hcCCCcEEEeecCCCCccccCCCCccccccccccccccccccchhHHHHH-HH
Confidence 345565555555666777888887 6 999999999875421100 00000000000 0001112345554 77
Q ss_pred HHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHH-hcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhc
Q 012210 228 VPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLS-RCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQAL 306 (468)
Q Consensus 228 ~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~-~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~ 306 (468)
+.++++.+.. .+.+..+++++||||||.+++.+|. ++ +++++++|++++.......
T Consensus 101 ~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~-----~~~~~~~v~~~~~~~~~~~----------------- 157 (226)
T 3cn9_A 101 VIALIDEQRA-KGIAAERIILAGFSQGGAVVLHTAFRRY-----AQPLGGVLALSTYAPTFDD----------------- 157 (226)
T ss_dssp HHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHHTC-----SSCCSEEEEESCCCGGGGG-----------------
T ss_pred HHHHHHHHHH-cCCCcccEEEEEECHHHHHHHHHHHhcC-----ccCcceEEEecCcCCCchh-----------------
Confidence 7788877755 2333358999999999999999999 86 7889999999875431100
Q ss_pred CCCCcchHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCcccc
Q 012210 307 NVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFY 386 (468)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (468)
. .
T Consensus 158 -------------------------------------~--------------~--------------------------- 159 (226)
T 3cn9_A 158 -------------------------------------L--------------A--------------------------- 159 (226)
T ss_dssp -------------------------------------C--------------C---------------------------
T ss_pred -------------------------------------h--------------h---------------------------
Confidence 0 0
Q ss_pred ccccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCC--ceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 387 KDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPED--LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 387 ~~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~--~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
....++++|+|+++|++|.++|++.++.+.+.+++. ..+++++ + ++|..+.+ ..+.+.+||+++
T Consensus 160 -~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~--~-~gH~~~~~----------~~~~i~~~l~~~ 225 (226)
T 3cn9_A 160 -LDERHKRIPVLHLHGSQDDVVDPALGRAAHDALQAQGVEVGWHDY--P-MGHEVSLE----------EIHDIGAWLRKR 225 (226)
T ss_dssp -CCTGGGGCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEE--S-CCSSCCHH----------HHHHHHHHHHHH
T ss_pred -hcccccCCCEEEEecCCCCccCHHHHHHHHHHHHHcCCceeEEEe--c-CCCCcchh----------hHHHHHHHHHhh
Confidence 001457899999999999999999999999888743 3578887 7 88987654 245678888764
|
| >3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=99.55 E-value=5.6e-14 Score=127.05 Aligned_cols=131 Identities=11% Similarity=0.133 Sum_probs=98.6
Q ss_pred ChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcc
Q 012210 219 DFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLP 298 (468)
Q Consensus 219 ~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~ 298 (468)
++++++ +|+.++++++ + ++++++||||||.+++.+|.++ |++|+++|++++.......
T Consensus 57 ~~~~~~-~~~~~~~~~~----~---~~~~l~G~S~Gg~~a~~~a~~~-----p~~v~~lvl~~~~~~~~~~--------- 114 (191)
T 3bdv_A 57 DLDRWV-LAIRRELSVC----T---QPVILIGHSFGALAACHVVQQG-----QEGIAGVMLVAPAEPMRFE--------- 114 (191)
T ss_dssp CHHHHH-HHHHHHHHTC----S---SCEEEEEETHHHHHHHHHHHTT-----CSSEEEEEEESCCCGGGGT---------
T ss_pred CHHHHH-HHHHHHHHhc----C---CCeEEEEEChHHHHHHHHHHhc-----CCCccEEEEECCCcccccc---------
Confidence 455665 7777777654 2 3899999999999999999987 8899999999886432100
Q ss_pred cCchhhhcCCCCcchHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCccc
Q 012210 299 LADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLR 378 (468)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (468)
+ ..
T Consensus 115 ----------------------~-----------------------~~-------------------------------- 117 (191)
T 3bdv_A 115 ----------------------I-----------------------DD-------------------------------- 117 (191)
T ss_dssp ----------------------C-----------------------TT--------------------------------
T ss_pred ----------------------C-----------------------cc--------------------------------
Confidence 0 00
Q ss_pred ccCCccccccccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHH
Q 012210 379 DRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIV 458 (468)
Q Consensus 379 ~~~~~~~~~~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~ 458 (468)
...+.++++|+|+++|++|.++|++.++.+.+.+ +. +++++ ++++|+.+.+-. .+.++ +.+.|.
T Consensus 118 --------~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~-~~--~~~~~--~~~gH~~~~~~~--~~~~~-~~~~i~ 181 (191)
T 3bdv_A 118 --------RIQASPLSVPTLTFASHNDPLMSFTRAQYWAQAW-DS--ELVDV--GEAGHINAEAGF--GPWEY-GLKRLA 181 (191)
T ss_dssp --------TSCSSCCSSCEEEEECSSBTTBCHHHHHHHHHHH-TC--EEEEC--CSCTTSSGGGTC--SSCHH-HHHHHH
T ss_pred --------ccccccCCCCEEEEecCCCCcCCHHHHHHHHHhc-CC--cEEEe--CCCCcccccccc--hhHHH-HHHHHH
Confidence 0235678999999999999999999999999887 44 78887 899999887411 01344 459999
Q ss_pred HHHhhc
Q 012210 459 QFLGRY 464 (468)
Q Consensus 459 ~FL~~~ 464 (468)
+||++.
T Consensus 182 ~fl~~~ 187 (191)
T 3bdv_A 182 EFSEIL 187 (191)
T ss_dssp HHHHTT
T ss_pred HHHHHh
Confidence 999876
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A | Back alignment and structure |
|---|
Probab=99.54 E-value=2.4e-13 Score=121.84 Aligned_cols=169 Identities=17% Similarity=0.128 Sum_probs=117.9
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCc---eEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQ---LSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAME 233 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy---~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~ 233 (468)
++-.|.+.|-...+..+++.|+ .+|| .|+++|+.+++.... .+.+++. +++.++++
T Consensus 6 vv~~HG~~~~~~~~~~~~~~l~---~~G~~~~~v~~~d~~g~g~s~~-----------------~~~~~~~-~~~~~~~~ 64 (181)
T 1isp_A 6 VVMVHGIGGASFNFAGIKSYLV---SQGWSRDKLYAVDFWDKTGTNY-----------------NNGPVLS-RFVQKVLD 64 (181)
T ss_dssp EEEECCTTCCGGGGHHHHHHHH---HTTCCGGGEEECCCSCTTCCHH-----------------HHHHHHH-HHHHHHHH
T ss_pred EEEECCcCCCHhHHHHHHHHHH---HcCCCCccEEEEecCCCCCchh-----------------hhHHHHH-HHHHHHHH
Confidence 3444555566677788888888 8998 699999988754200 1233333 55555555
Q ss_pred HHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcch
Q 012210 234 YIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPL 313 (468)
Q Consensus 234 ~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (468)
.+ +.. +++++||||||.+++.++.++ ..+.+|+++|+++++......
T Consensus 65 ~~----~~~--~~~lvG~S~Gg~~a~~~~~~~---~~~~~v~~~v~~~~~~~~~~~------------------------ 111 (181)
T 1isp_A 65 ET----GAK--KVDIVAHSMGGANTLYYIKNL---DGGNKVANVVTLGGANRLTTG------------------------ 111 (181)
T ss_dssp HH----CCS--CEEEEEETHHHHHHHHHHHHS---SGGGTEEEEEEESCCGGGTCS------------------------
T ss_pred Hc----CCC--eEEEEEECccHHHHHHHHHhc---CCCceEEEEEEEcCccccccc------------------------
Confidence 44 333 899999999999999999874 125789999999886431110
Q ss_pred HhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCcc
Q 012210 314 GALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKC 393 (468)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I 393 (468)
. ..+ ......
T Consensus 112 -----------------------------------------~---~~~--------------------------~~~~~~ 121 (181)
T 1isp_A 112 -----------------------------------------K---ALP--------------------------GTDPNQ 121 (181)
T ss_dssp -----------------------------------------B---CCC--------------------------CSCTTC
T ss_pred -----------------------------------------c---cCC--------------------------CCCCcc
Confidence 0 000 000123
Q ss_pred CccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 394 NIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 394 ~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
++|+|+|+|++|.++|++.. .+++. +++++ ++++|..+.+ .+ ++.+.|.+||.+..
T Consensus 122 ~~p~l~i~G~~D~~v~~~~~-----~~~~~--~~~~~--~~~gH~~~~~------~~-~~~~~i~~fl~~~~ 177 (181)
T 1isp_A 122 KILYTSIYSSADMIVMNYLS-----RLDGA--RNVQI--HGVGHIGLLY------SS-QVNSLIKEGLNGGG 177 (181)
T ss_dssp CCEEEEEEETTCSSSCHHHH-----CCBTS--EEEEE--SSCCTGGGGG------CH-HHHHHHHHHHTTTC
T ss_pred CCcEEEEecCCCcccccccc-----cCCCC--cceee--ccCchHhhcc------CH-HHHHHHHHHHhccC
Confidence 57999999999999998843 36765 77887 8999998886 54 79999999998764
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 | Back alignment and structure |
|---|
Probab=99.54 E-value=5e-14 Score=134.85 Aligned_cols=196 Identities=12% Similarity=0.096 Sum_probs=123.3
Q ss_pred ccchhhHHHHH----HhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCC
Q 012210 167 AIQIRDLSQNL----VNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPK 242 (468)
Q Consensus 167 ~~~i~~~a~~l----a~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~ 242 (468)
...+..+++.| + ..||.|+++|+.+... ..+.... +|+.++++++..+.+..
T Consensus 59 ~~~~~~~~~~L~~~a~---~~g~~vi~~d~r~~~~--------------------~~~~~~~-~d~~~~~~~l~~~~~~~ 114 (273)
T 1vkh_A 59 PNDFNQLANTIKSMDT---ESTVCQYSIEYRLSPE--------------------ITNPRNL-YDAVSNITRLVKEKGLT 114 (273)
T ss_dssp GGGGHHHHHHHHHHCT---TCCEEEEEECCCCTTT--------------------SCTTHHH-HHHHHHHHHHHHHHTCC
T ss_pred hHHHHHHHHHHhhhhc---cCCcEEEEeecccCCC--------------------CCCCcHH-HHHHHHHHHHHHhCCcC
Confidence 34566777777 4 7899999999864321 1223344 88899999998876655
Q ss_pred CCcEEEEEEehhHHHHHHHHHhcCCCC------------CcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCC
Q 012210 243 DGKLLAIGHSMGGILLYAMLSRCGFEG------------RESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPV 310 (468)
Q Consensus 243 ~~~v~lvGhS~GG~ia~~~a~~~~~~~------------~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (468)
+++++||||||.+++.++.++.... .+++|+++|++++..+..... .. .+
T Consensus 115 --~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~~---~~------------~~- 176 (273)
T 1vkh_A 115 --NINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELL---IE------------YP- 176 (273)
T ss_dssp --CEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHH---HH------------CG-
T ss_pred --cEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccHHHhh---hh------------cc-
Confidence 9999999999999999998741100 056789999988754421100 00 00
Q ss_pred cchHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCcccccccc
Q 012210 311 VPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHI 390 (468)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 390 (468)
. ...++...+... . ..+.... .....+. ...+
T Consensus 177 -~-----------------~~~~~~~~~~~~----~--------~~~~~~~-~~~~~~~-----------------~~~~ 208 (273)
T 1vkh_A 177 -E-----------------YDCFTRLAFPDG----I--------QMYEEEP-SRVMPYV-----------------KKAL 208 (273)
T ss_dssp -G-----------------GHHHHHHHCTTC----G--------GGCCCCH-HHHHHHH-----------------HHHH
T ss_pred -c-----------------HHHHHHHHhccc----c--------cchhhcc-cccChhh-----------------hhcc
Confidence 0 001111111000 0 0000000 0000000 0122
Q ss_pred CccCccEEEEecCCCCcCCHHHHHHHHHhCCCC--ceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHH
Q 012210 391 HKCNIPILAIAGDQDLICPPEAVEETVKLLPED--LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFL 461 (468)
Q Consensus 391 ~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~--~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL 461 (468)
.++++|+|+++|++|.++|++.++.+.+.++.. ..+++++ ++++|..+++ . +++.+.|.+||
T Consensus 209 ~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~--~~~gH~~~~~------~-~~~~~~i~~fl 272 (273)
T 1vkh_A 209 SRFSIDMHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLD--DLGLHNDVYK------N-GKVAKYIFDNI 272 (273)
T ss_dssp HHHTCEEEEEEETTCSSCCTHHHHHHHHHHHHTTCCEEEEEE--CCCSGGGGGG------C-HHHHHHHHHTC
T ss_pred cccCCCEEEEecCCcCCCChHHHHHHHHHHHhcCCceEEEEe--CCCccccccc------C-hHHHHHHHHHc
Confidence 347899999999999999999999999888643 4577777 8999998876 4 88999999886
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.53 E-value=2e-13 Score=126.27 Aligned_cols=180 Identities=14% Similarity=0.165 Sum_probs=123.1
Q ss_pred cccccccccccccchhhHHHHHHhhhhcCceEecc--CccccccC-CccchHHHhhcccceEeecCChhhHH--hhhHHH
Q 012210 156 SLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSP--QLFDLQER-LFSTIDDFQKQLDLIVQYDWDFDHYL--EEDVPA 230 (468)
Q Consensus 156 ~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viap--dl~~~~~~-~~~~~~~l~~~~~~~~~~D~~~~~~~--~~D~~a 230 (468)
.++-.+.+.|....+..+++.|+ . ||.|+++ |+.+++.. |... .....++...+. ..++.+
T Consensus 40 ~vv~~HG~~~~~~~~~~~~~~l~---~-g~~v~~~~~d~~g~g~s~~~~~----------~~~~~~~~~~~~~~~~~~~~ 105 (226)
T 2h1i_A 40 VLLLLHGTGGNELDLLPLAEIVD---S-EASVLSVRGNVLENGMPRFFRR----------LAEGIFDEEDLIFRTKELNE 105 (226)
T ss_dssp EEEEECCTTCCTTTTHHHHHHHH---T-TSCEEEECCSEEETTEEESSCE----------EETTEECHHHHHHHHHHHHH
T ss_pred EEEEEecCCCChhHHHHHHHHhc---c-CceEEEecCcccCCcchhhccc----------cCccCcChhhHHHHHHHHHH
Confidence 35555666666667777888887 5 9999999 77766532 0000 000112333332 155666
Q ss_pred HHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCC
Q 012210 231 AMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPV 310 (468)
Q Consensus 231 ~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (468)
+++++....+.+..+++++||||||.+++.+|..+ +++++++|++++......
T Consensus 106 ~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-----~~~~~~~v~~~~~~~~~~---------------------- 158 (226)
T 2h1i_A 106 FLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHY-----ENALKGAVLHHPMVPRRG---------------------- 158 (226)
T ss_dssp HHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHC-----TTSCSEEEEESCCCSCSS----------------------
T ss_pred HHHHHHhhcCCCcccEEEEEEChHHHHHHHHHHhC-----hhhhCEEEEeCCCCCcCc----------------------
Confidence 67666777655445999999999999999999987 778999999988543110
Q ss_pred cchHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCcccccccc
Q 012210 311 VPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHI 390 (468)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 390 (468)
....
T Consensus 159 ----------------------------------------------------------------------------~~~~ 162 (226)
T 2h1i_A 159 ----------------------------------------------------------------------------MQLA 162 (226)
T ss_dssp ----------------------------------------------------------------------------CCCC
T ss_pred ----------------------------------------------------------------------------cccc
Confidence 0012
Q ss_pred CccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEE-EecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 391 HKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYK-VFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 391 ~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~-v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
..+++|+|+++|++|.++|++.++.+.+.+++...... ++ ++++|..+.+ ..+.+.+||.++
T Consensus 163 ~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~gH~~~~~----------~~~~~~~~l~~~ 225 (226)
T 2h1i_A 163 NLAGKSVFIAAGTNDPICSSAESEELKVLLENANANVTMHW--ENRGHQLTMG----------EVEKAKEWYDKA 225 (226)
T ss_dssp CCTTCEEEEEEESSCSSSCHHHHHHHHHHHHTTTCEEEEEE--ESSTTSCCHH----------HHHHHHHHHHHH
T ss_pred cccCCcEEEEeCCCCCcCCHHHHHHHHHHHHhcCCeEEEEe--CCCCCCCCHH----------HHHHHHHHHHHh
Confidence 33589999999999999999999999998875432333 66 8888887643 456777887654
|
| >4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.53 E-value=4.3e-14 Score=129.12 Aligned_cols=61 Identities=15% Similarity=0.064 Sum_probs=49.3
Q ss_pred cccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 388 DHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 388 ~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
....++++|+|+|+|++|.+||++.+.+++ +++ +++++ ++++|.. . ..+++.+.|.+||+-
T Consensus 131 ~~~~~~~~P~LiihG~~D~~Vp~~~s~~l~---~~~--~l~i~--~g~~H~~--~------~~~~~~~~I~~FL~~ 191 (202)
T 4fle_A 131 IEKLESPDLLWLLQQTGDEVLDYRQAVAYY---TPC--RQTVE--SGGNHAF--V------GFDHYFSPIVTFLGL 191 (202)
T ss_dssp CSSCSCGGGEEEEEETTCSSSCHHHHHHHT---TTS--EEEEE--SSCCTTC--T------TGGGGHHHHHHHHTC
T ss_pred hhhhccCceEEEEEeCCCCCCCHHHHHHHh---hCC--EEEEE--CCCCcCC--C------CHHHHHHHHHHHHhh
Confidence 346778999999999999999999887664 555 77777 8999953 2 457789999999973
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=1.9e-13 Score=134.98 Aligned_cols=228 Identities=13% Similarity=0.111 Sum_probs=131.7
Q ss_pred ccccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCcc-chHHHh-------hcccce----EeecCChhh
Q 012210 155 SSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFS-TIDDFQ-------KQLDLI----VQYDWDFDH 222 (468)
Q Consensus 155 ~~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~-~~~~l~-------~~~~~~----~~~D~~~~~ 222 (468)
+.++-.++..+.. ........++ ..||.|+++|+.+++..... ....+. ..++.. ...++.+..
T Consensus 96 p~vv~~HG~g~~~-~~~~~~~~l~---~~G~~v~~~d~rG~g~s~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~ 171 (337)
T 1vlq_A 96 PCVVQYIGYNGGR-GFPHDWLFWP---SMGYICFVMDTRGQGSGWLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRR 171 (337)
T ss_dssp EEEEECCCTTCCC-CCGGGGCHHH---HTTCEEEEECCTTCCCSSSCCCCCBCCSSSBCCCCSSSTTTTTTCTTTCHHHH
T ss_pred cEEEEEcCCCCCC-CCchhhcchh---hCCCEEEEecCCCCCCcccCCCCcccccccCCCCCCcccccCCCCHHHhHHHH
Confidence 3344434333322 2334445566 89999999999998743211 000000 000000 001122335
Q ss_pred HHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCch
Q 012210 223 YLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADP 302 (468)
Q Consensus 223 ~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~ 302 (468)
.. +|+.++++++..+...+.++++++|||+||.+++.+|..+ + +++++|+++|....... ...
T Consensus 172 ~~-~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~-----p-~v~~~vl~~p~~~~~~~--~~~-------- 234 (337)
T 1vlq_A 172 VF-TDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALS-----K-KAKALLCDVPFLCHFRR--AVQ-------- 234 (337)
T ss_dssp HH-HHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHC-----S-SCCEEEEESCCSCCHHH--HHH--------
T ss_pred HH-HHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHhcC-----C-CccEEEECCCcccCHHH--HHh--------
Confidence 54 8999999999887544445899999999999999999984 4 69999988875432110 000
Q ss_pred hhhcCCCCcchHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCC
Q 012210 303 AQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGG 382 (468)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (468)
.... .++ .. +..++... ....... ...+.
T Consensus 235 -----------------~~~~---~~~-~~----------------~~~~~~~~-~~~~~~~----~~~~~--------- 263 (337)
T 1vlq_A 235 -----------------LVDT---HPY-AE----------------ITNFLKTH-RDKEEIV----FRTLS--------- 263 (337)
T ss_dssp -----------------HCCC---TTH-HH----------------HHHHHHHC-TTCHHHH----HHHHH---------
T ss_pred -----------------cCCC---cch-HH----------------HHHHHHhC-chhHHHH----HHhhh---------
Confidence 0000 000 00 00000000 0000000 00110
Q ss_pred ccccccccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 012210 383 KFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 462 (468)
Q Consensus 383 ~~~~~~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~ 462 (468)
.++....+.++++|+|+++|+.|.++|++.+..+++.++. .++++++ ++++|..+. ....+.+.+||.
T Consensus 264 ~~~~~~~~~~i~~P~lii~G~~D~~~p~~~~~~~~~~l~~-~~~~~~~--~~~gH~~~~---------~~~~~~~~~fl~ 331 (337)
T 1vlq_A 264 YFDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNYYAG-PKEIRIY--PYNNHEGGG---------SFQAVEQVKFLK 331 (337)
T ss_dssp TTCHHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCCS-SEEEEEE--TTCCTTTTH---------HHHHHHHHHHHH
T ss_pred hccHHHHHHHcCCCEEEEeeCCCCCCCchhHHHHHHhcCC-CcEEEEc--CCCCCCCcc---------hhhHHHHHHHHH
Confidence 0112234567899999999999999999999999999986 4678888 888888643 345677778877
Q ss_pred hccC
Q 012210 463 RYDS 466 (468)
Q Consensus 463 ~~~~ 466 (468)
++..
T Consensus 332 ~~l~ 335 (337)
T 1vlq_A 332 KLFE 335 (337)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 6643
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.52 E-value=3.2e-13 Score=123.97 Aligned_cols=184 Identities=12% Similarity=0.098 Sum_probs=119.6
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccC---CccchHHHhhcccceEeecC-ChhhHHhhhHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQER---LFSTIDDFQKQLDLIVQYDW-DFDHYLEEDVPAAM 232 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~---~~~~~~~l~~~~~~~~~~D~-~~~~~~~~D~~a~i 232 (468)
++-.|.+.|-...+..+++.|+ .||.|+++|....... |... ......... ..+. .+.... +++.+++
T Consensus 19 vv~lHG~g~~~~~~~~~~~~l~----~~~~v~~~~~~~~~~g~~~~~~~-~g~g~~~~~--~~~~~~~~~~~-~~~~~~~ 90 (209)
T 3og9_A 19 LLLLHSTGGDEHQLVEIAEMIA----PSHPILSIRGRINEQGVNRYFKL-RGLGGFTKE--NFDLESLDEET-DWLTDEV 90 (209)
T ss_dssp EEEECCTTCCTTTTHHHHHHHS----TTCCEEEECCSBCGGGCCBSSCB-CSCTTCSGG--GBCHHHHHHHH-HHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHhcC----CCceEEEecCCcCCCCcccceec-ccccccccC--CCCHHHHHHHH-HHHHHHH
Confidence 5554555555566666766665 7999999996422110 1100 000000000 0010 122333 7777888
Q ss_pred HHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcc
Q 012210 233 EYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVP 312 (468)
Q Consensus 233 ~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (468)
+.+....+.+.++++++||||||.+++.+|.++ |++++++|++++.......
T Consensus 91 ~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~-----~~~~~~~v~~~~~~~~~~~----------------------- 142 (209)
T 3og9_A 91 SLLAEKHDLDVHKMIAIGYSNGANVALNMFLRG-----KINFDKIIAFHGMQLEDFE----------------------- 142 (209)
T ss_dssp HHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTT-----SCCCSEEEEESCCCCCCCC-----------------------
T ss_pred HHHHHhcCCCcceEEEEEECHHHHHHHHHHHhC-----CcccceEEEECCCCCCccc-----------------------
Confidence 888777766445999999999999999999987 8889999998874321000
Q ss_pred hHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCc
Q 012210 313 LGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHK 392 (468)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 392 (468)
.....
T Consensus 143 ---------------------------------------------------------------------------~~~~~ 147 (209)
T 3og9_A 143 ---------------------------------------------------------------------------QTVQL 147 (209)
T ss_dssp ---------------------------------------------------------------------------CCCCC
T ss_pred ---------------------------------------------------------------------------ccccc
Confidence 01234
Q ss_pred cCccEEEEecCCCCcCCHHHHHHHHHhCCCC--ceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 393 CNIPILAIAGDQDLICPPEAVEETVKLLPED--LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 393 I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~--~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
+++|+|+++|++|.++|++.++++.+.++.. .++++++ + ++|... .+..+.+.+||+++
T Consensus 148 ~~~p~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~--~-~gH~~~----------~~~~~~~~~~l~~~ 208 (209)
T 3og9_A 148 DDKHVFLSYAPNDMIVPQKNFGDLKGDLEDSGCQLEIYES--S-LGHQLT----------QEEVLAAKKWLTET 208 (209)
T ss_dssp TTCEEEEEECTTCSSSCHHHHHHHHHHHHHTTCEEEEEEC--S-STTSCC----------HHHHHHHHHHHHHH
T ss_pred cCCCEEEEcCCCCCccCHHHHHHHHHHHHHcCCceEEEEc--C-CCCcCC----------HHHHHHHHHHHHhh
Confidence 6799999999999999999999988887654 3455554 4 677654 33467888999875
|
| >1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=1.1e-13 Score=136.90 Aligned_cols=67 Identities=24% Similarity=0.295 Sum_probs=54.5
Q ss_pred cCccEEEEecCCCCcCCH-----HHHHHHHHhCCC--CceeEEEecCCCCC-----CCCcccccccccchhhHHHHHHHH
Q 012210 393 CNIPILAIAGDQDLICPP-----EAVEETVKLLPE--DLVTYKVFGEPSGP-----HYAHYDLVGGRMAVEQVYPCIVQF 460 (468)
Q Consensus 393 I~vPvLiI~G~~D~ivp~-----~~~~~l~~~ip~--~~~~~~v~~~~~ag-----H~~H~e~~~~~~~pe~v~~~I~~F 460 (468)
+++|+|+++|++|.++|+ +.++.+.+.++. ...+++++ +++| |+.+.+ ..++++.+.|.+|
T Consensus 244 ~~~PvLii~G~~D~~~p~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~~~gi~G~~H~~~~~-----~~~~~~~~~i~~f 316 (328)
T 1qlw_A 244 TSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLMSL--PALGVHGNSHMMMQD-----RNNLQVADLILDW 316 (328)
T ss_dssp TTSCEEEEECSSCTTCTTTHHHHHHHHHHHHHHHHTTCCEEEEEG--GGGTCCCCCTTGGGS-----TTHHHHHHHHHHH
T ss_pred cCCCEEEEeccCCccccchhhHHHHHHHHHHHHHHhCCCceEEEc--CCCCcCCCcccchhc-----cCHHHHHHHHHHH
Confidence 579999999999999996 888888888872 24577777 7555 888887 2389999999999
Q ss_pred HhhccC
Q 012210 461 LGRYDS 466 (468)
Q Consensus 461 L~~~~~ 466 (468)
|+++..
T Consensus 317 l~~~~~ 322 (328)
T 1qlw_A 317 IGRNTA 322 (328)
T ss_dssp HHHTCC
T ss_pred HHhccc
Confidence 998753
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.51 E-value=3.4e-13 Score=145.21 Aligned_cols=206 Identities=15% Similarity=0.110 Sum_probs=133.0
Q ss_pred chhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEE
Q 012210 169 QIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLA 248 (468)
Q Consensus 169 ~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~l 248 (468)
.+..+++.|+ .+||.|+++|+.|..+......+ ... . .+.....+|+.++++++..+...+.+++++
T Consensus 441 ~~~~~~~~l~---~~G~~v~~~d~rG~~~~G~~~~~----~~~----~--~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l 507 (662)
T 3azo_A 441 VLDLDVAYFT---SRGIGVADVNYGGSTGYGRAYRE----RLR----G--RWGVVDVEDCAAVATALAEEGTADRARLAV 507 (662)
T ss_dssp SCCHHHHHHH---TTTCEEEEEECTTCSSSCHHHHH----TTT----T--TTTTHHHHHHHHHHHHHHHTTSSCTTCEEE
T ss_pred cchHHHHHHH---hCCCEEEEECCCCCCCccHHHHH----hhc----c--ccccccHHHHHHHHHHHHHcCCcChhhEEE
Confidence 5566788888 89999999999984331111111 100 1 121222489999999999885444569999
Q ss_pred EEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCch
Q 012210 249 IGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPP 328 (468)
Q Consensus 249 vGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (468)
+||||||.+++.++.+ +++++++|+++|..+.... .... . ..
T Consensus 508 ~G~S~GG~~a~~~~~~------~~~~~~~v~~~~~~~~~~~------~~~~--------~------------------~~ 549 (662)
T 3azo_A 508 RGGSAGGWTAASSLVS------TDVYACGTVLYPVLDLLGW------ADGG--------T------------------HD 549 (662)
T ss_dssp EEETHHHHHHHHHHHH------CCCCSEEEEESCCCCHHHH------HTTC--------S------------------CG
T ss_pred EEECHHHHHHHHHHhC------cCceEEEEecCCccCHHHH------hccc--------c------------------cc
Confidence 9999999999998875 8899999999876542110 0000 0 00
Q ss_pred hHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecCCCCcC
Q 012210 329 YVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLIC 408 (468)
Q Consensus 329 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~D~iv 408 (468)
+...+...++.... ...+. +.. ......+.++++|+|+++|++|.++
T Consensus 550 ~~~~~~~~~~~~~~-~~~~~-------------------~~~-------------~sp~~~~~~~~~P~lii~G~~D~~v 596 (662)
T 3azo_A 550 FESRYLDFLIGSFE-EFPER-------------------YRD-------------RAPLTRADRVRVPFLLLQGLEDPVC 596 (662)
T ss_dssp GGTTHHHHHTCCTT-TCHHH-------------------HHH-------------TCGGGGGGGCCSCEEEEEETTCSSS
T ss_pred hhhHhHHHHhCCCc-cchhH-------------------HHh-------------hChHhHhccCCCCEEEEeeCCCCCC
Confidence 00001111111000 00100 000 0112456788999999999999999
Q ss_pred CHHHHHHHHHhCCCC--ceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 409 PPEAVEETVKLLPED--LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 409 p~~~~~~l~~~ip~~--~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
|++.++++++.++.. .++++++ ++++|..... +.+.++.+.+.+||.++.
T Consensus 597 p~~~~~~~~~~l~~~g~~~~~~~~--~~~gH~~~~~-----~~~~~~~~~~~~fl~~~l 648 (662)
T 3azo_A 597 PPEQCDRFLEAVAGCGVPHAYLSF--EGEGHGFRRK-----ETMVRALEAELSLYAQVF 648 (662)
T ss_dssp CTHHHHHHHHHHTTSCCCEEEEEE--TTCCSSCCSH-----HHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEE--CCCCCCCCCh-----HHHHHHHHHHHHHHHHHh
Confidence 999999999998865 4567777 8999976432 367889999999999875
|
| >2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=1.2e-12 Score=130.60 Aligned_cols=203 Identities=15% Similarity=0.054 Sum_probs=121.9
Q ss_pred hhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhc----CCCCC-
Q 012210 170 IRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQS----KPKDG- 244 (468)
Q Consensus 170 i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~----~~~~~- 244 (468)
+..+++.|+ -..||.|+++|+.+.... .+.... +|+.++++++..+. ..+.+
T Consensus 134 ~~~~~~~la--~~~g~~vv~~d~rg~~~~--------------------~~~~~~-~D~~~~~~~l~~~~~~~~~~d~~~ 190 (351)
T 2zsh_A 134 YDTLCRRLV--GLCKCVVVSVNYRRAPEN--------------------PYPCAY-DDGWIALNWVNSRSWLKSKKDSKV 190 (351)
T ss_dssp HHHHHHHHH--HHHTSEEEEECCCCTTTS--------------------CTTHHH-HHHHHHHHHHHTCGGGCCTTTSSC
T ss_pred HHHHHHHHH--HHcCCEEEEecCCCCCCC--------------------CCchhH-HHHHHHHHHHHhCchhhcCCCCCC
Confidence 556667665 146999999998875321 122333 89999999998753 34456
Q ss_pred cEEEEEEehhHHHHHHHHHhcCCCCCcc---cccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhc
Q 012210 245 KLLAIGHSMGGILLYAMLSRCGFEGRES---RLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAY 321 (468)
Q Consensus 245 ~v~lvGhS~GG~ia~~~a~~~~~~~~p~---~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (468)
+++++||||||.+++.+|.++ ++ +++++|+++|.............. ...+
T Consensus 191 ~i~l~G~S~GG~la~~~a~~~-----~~~~~~v~~~vl~~p~~~~~~~~~~~~~~---------~~~~------------ 244 (351)
T 2zsh_A 191 HIFLAGDSSGGNIAHNVALRA-----GESGIDVLGNILLNPMFGGNERTESEKSL---------DGKY------------ 244 (351)
T ss_dssp EEEEEEETHHHHHHHHHHHHH-----HTTTCCCCEEEEESCCCCCSSCCHHHHHH---------TTTS------------
T ss_pred cEEEEEeCcCHHHHHHHHHHh-----hccCCCeeEEEEECCccCCCcCChhhhhc---------CCCc------------
Confidence 899999999999999999986 55 899999998866543221100000 0000
Q ss_pred CCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCccc-cc--CC-ccccccccCccCc-c
Q 012210 322 PLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLR-DR--GG-KFFYKDHIHKCNI-P 396 (468)
Q Consensus 322 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~-~~~~~~~l~~I~v-P 396 (468)
. ........+ ...+...... .. .. .......+.++++ |
T Consensus 245 -~--------------------~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~pP 287 (351)
T 2zsh_A 245 -F--------------------VTVRDRDWY----------------WKAFLPEGEDREHPACNPFSPRGKSLEGVSFPK 287 (351)
T ss_dssp -S--------------------CCHHHHHHH----------------HHHHSCTTCCTTSTTTCTTSTTSCCCTTCCCCE
T ss_pred -c--------------------cCHHHHHHH----------------HHHhCCCCCCCCCcccCCCCCCccchhhCCCCC
Confidence 0 000000000 0000000000 00 00 0011245677777 9
Q ss_pred EEEEecCCCCcCCHHHHHHHHHhCCC--CceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 397 ILAIAGDQDLICPPEAVEETVKLLPE--DLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 397 vLiI~G~~D~ivp~~~~~~l~~~ip~--~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
+|+++|++|.+++ ....+.+.++. ..++++++ ++++|..+.. ...+.++++.+.|.+||+++
T Consensus 288 ~Lii~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~--~g~gH~~~~~--~~~~~~~~~~~~i~~Fl~~~ 351 (351)
T 2zsh_A 288 SLVVVAGLDLIRD--WQLAYAEGLKKAGQEVKLMHL--EKATVGFYLL--PNNNHFHNVMDEISAFVNAE 351 (351)
T ss_dssp EEEEEETTSTTHH--HHHHHHHHHHHTTCCEEEEEE--TTCCTTTTSS--SCSHHHHHHHHHHHHHHHC-
T ss_pred EEEEEcCCCcchH--HHHHHHHHHHHcCCCEEEEEE--CCCcEEEEec--CCCHHHHHHHHHHHHHhcCC
Confidence 9999999999986 33444444431 24588888 9999988861 11137899999999999864
|
| >3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.51 E-value=6.4e-13 Score=131.13 Aligned_cols=90 Identities=12% Similarity=0.154 Sum_probs=66.5
Q ss_pred cccchhhHHHHHHhhhh-cCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCC
Q 012210 166 IAIQIRDLSQNLVNMIE-EGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDG 244 (468)
Q Consensus 166 ~~~~i~~~a~~la~~l~-~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~ 244 (468)
-......++..|+ . .||+|+++|+.+... ..+.... +|+.++++++....+..
T Consensus 111 ~~~~~~~~~~~la---~~~g~~vi~~D~r~~~~--------------------~~~~~~~-~d~~~~~~~l~~~~~~~-- 164 (326)
T 3d7r_A 111 PSPFHWRLLDKIT---LSTLYEVVLPIYPKTPE--------------------FHIDDTF-QAIQRVYDQLVSEVGHQ-- 164 (326)
T ss_dssp CCHHHHHHHHHHH---HHHCSEEEEECCCCTTT--------------------SCHHHHH-HHHHHHHHHHHHHHCGG--
T ss_pred CCHHHHHHHHHHH---HHhCCEEEEEeCCCCCC--------------------CCchHHH-HHHHHHHHHHHhccCCC--
Confidence 3444555666666 4 499999999765321 1222333 88888888888775554
Q ss_pred cEEEEEEehhHHHHHHHHHhcCCCCCccc----ccceeEEcccccc
Q 012210 245 KLLAIGHSMGGILLYAMLSRCGFEGRESR----LAAIVTLASSLDY 286 (468)
Q Consensus 245 ~v~lvGhS~GG~ia~~~a~~~~~~~~p~~----V~~lVllap~~~~ 286 (468)
+++++||||||.+++.+|.++ +++ ++++|+++|..+.
T Consensus 165 ~i~l~G~S~GG~lAl~~a~~~-----~~~~~~~v~~lvl~~p~~~~ 205 (326)
T 3d7r_A 165 NVVVMGDGSGGALALSFVQSL-----LDNQQPLPNKLYLISPILDA 205 (326)
T ss_dssp GEEEEEETHHHHHHHHHHHHH-----HHTTCCCCSEEEEESCCCCT
T ss_pred cEEEEEECHHHHHHHHHHHHH-----HhcCCCCCCeEEEECccccc
Confidence 999999999999999999986 554 9999999987654
|
| >2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.3e-12 Score=127.58 Aligned_cols=97 Identities=18% Similarity=0.168 Sum_probs=69.2
Q ss_pred ccccchhhHHHHHHhhhhc-CceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhc---C
Q 012210 165 AIAIQIRDLSQNLVNMIEE-GQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQS---K 240 (468)
Q Consensus 165 G~~~~i~~~a~~la~~l~~-Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~---~ 240 (468)
|-......+++.|+ .. ||.|+++|+.+++.. .+.... +|+.++++++.... +
T Consensus 87 g~~~~~~~~~~~la---~~~g~~v~~~d~rg~g~~--------------------~~~~~~-~d~~~~~~~l~~~~~~~~ 142 (311)
T 2c7b_A 87 GSIETHDHICRRLS---RLSDSVVVSVDYRLAPEY--------------------KFPTAV-EDAYAALKWVADRADELG 142 (311)
T ss_dssp CCTGGGHHHHHHHH---HHHTCEEEEECCCCTTTS--------------------CTTHHH-HHHHHHHHHHHHTHHHHT
T ss_pred CChhhhHHHHHHHH---HhcCCEEEEecCCCCCCC--------------------CCCccH-HHHHHHHHHHHhhHHHhC
Confidence 45566677888887 65 999999999887541 122333 78888888887653 3
Q ss_pred CCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcccccc
Q 012210 241 PKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 286 (468)
Q Consensus 241 ~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~ 286 (468)
.+.++++++||||||.+++.++.+++... .+.++++|+++|..+.
T Consensus 143 ~d~~~i~l~G~S~GG~la~~~a~~~~~~~-~~~~~~~vl~~p~~~~ 187 (311)
T 2c7b_A 143 VDPDRIAVAGDSAGGNLAAVVSILDRNSG-EKLVKKQVLIYPVVNM 187 (311)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHHHHHTT-CCCCSEEEEESCCCCC
T ss_pred CCchhEEEEecCccHHHHHHHHHHHHhcC-CCCceeEEEECCccCC
Confidence 32248999999999999999998761110 1259999999987663
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A | Back alignment and structure |
|---|
Probab=99.48 E-value=5.4e-13 Score=136.59 Aligned_cols=203 Identities=13% Similarity=0.104 Sum_probs=120.2
Q ss_pred hHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEE
Q 012210 172 DLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGH 251 (468)
Q Consensus 172 ~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGh 251 (468)
.+++.++ ..||.|+++|+.|++... +. ....+... ...++++++......+..+++++||
T Consensus 212 ~~~~~l~---~~G~~V~~~D~~G~G~s~----------~~---~~~~~~~~----~~~~v~~~l~~~~~vd~~~i~l~G~ 271 (415)
T 3mve_A 212 LFRDHLA---KHDIAMLTVDMPSVGYSS----------KY---PLTEDYSR----LHQAVLNELFSIPYVDHHRVGLIGF 271 (415)
T ss_dssp HHHHTTG---GGTCEEEEECCTTSGGGT----------TS---CCCSCTTH----HHHHHHHHGGGCTTEEEEEEEEEEE
T ss_pred HHHHHHH---hCCCEEEEECCCCCCCCC----------CC---CCCCCHHH----HHHHHHHHHHhCcCCCCCcEEEEEE
Confidence 3455555 899999999999986521 11 01112222 3356667776654333358999999
Q ss_pred ehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCchhHH
Q 012210 252 SMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVF 331 (468)
Q Consensus 252 S~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (468)
||||.+++.+|..+ +++|+++|+++|+........ ... ... +....
T Consensus 272 S~GG~~a~~~a~~~-----~~~v~~~v~~~~~~~~~~~~~--~~~---------~~~------------------~~~~~ 317 (415)
T 3mve_A 272 RFGGNAMVRLSFLE-----QEKIKACVILGAPIHDIFASP--QKL---------QQM------------------PKMYL 317 (415)
T ss_dssp THHHHHHHHHHHHT-----TTTCCEEEEESCCCSHHHHCH--HHH---------TTS------------------CHHHH
T ss_pred CHHHHHHHHHHHhC-----CcceeEEEEECCccccccccH--HHH---------HHh------------------HHHHH
Confidence 99999999999976 789999999988643111000 000 000 00011
Q ss_pred HHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecCCCCcCCHH
Q 012210 332 SWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPE 411 (468)
Q Consensus 332 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~D~ivp~~ 411 (468)
..+...+.... .... .+...+..-.+. ...... ..++++|+|+|+|++|.++|++
T Consensus 318 ~~~~~~~g~~~-~~~~-------------------~~~~~~~~~~~~----~~~~~~-~~~i~~PvLii~G~~D~~vp~~ 372 (415)
T 3mve_A 318 DVLASRLGKSV-VDIY-------------------SLSGQMAAWSLK----VQGFLS-SRKTKVPILAMSLEGDPVSPYS 372 (415)
T ss_dssp HHHHHHTTCSS-BCHH-------------------HHHHHGGGGCTT----TTTTTT-SSCBSSCEEEEEETTCSSSCHH
T ss_pred HHHHHHhCCCc-cCHH-------------------HHHHHHhhcCcc----cccccc-cCCCCCCEEEEEeCCCCCCCHH
Confidence 11111111100 0111 011111100000 000001 4689999999999999999999
Q ss_pred HHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccC
Q 012210 412 AVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 466 (468)
Q Consensus 412 ~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~ 466 (468)
.++.+.+..++. +++++ ++ +..|. .++++.+.+.+||+++..
T Consensus 373 ~~~~l~~~~~~~--~l~~i--~g--~~~h~-------~~~~~~~~i~~fL~~~L~ 414 (415)
T 3mve_A 373 DNQMVAFFSTYG--KAKKI--SS--KTITQ-------GYEQSLDLAIKWLEDELL 414 (415)
T ss_dssp HHHHHHHTBTTC--EEEEE--CC--CSHHH-------HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCCc--eEEEe--cC--CCccc-------chHHHHHHHHHHHHHHhc
Confidence 999999988876 88887 55 23332 568899999999998753
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A | Back alignment and structure |
|---|
Probab=99.47 E-value=7.7e-14 Score=131.06 Aligned_cols=64 Identities=22% Similarity=0.277 Sum_probs=52.9
Q ss_pred cCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 390 IHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 390 l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
+.+|++|+|+|+|++|.+++ .....+.+.+++. .++++ + +||+.|.+ +|+++.+.|.+||+++.
T Consensus 175 l~~i~~P~lvi~G~~D~~~~-~~~~~~~~~~~~~--~~~~~--~-~gH~~~~e------~p~~~~~~i~~fl~~~~ 238 (242)
T 2k2q_B 175 LAQIQSPVHVFNGLDDKKCI-RDAEGWKKWAKDI--TFHQF--D-GGHMFLLS------QTEEVAERIFAILNQHP 238 (242)
T ss_dssp CTTCCCSEEEEEECSSCCHH-HHHHHHHTTCCCS--EEEEE--E-CCCSHHHH------HCHHHHHHHHHHHHTTT
T ss_pred CCccCCCEEEEeeCCCCcCH-HHHHHHHHHhcCC--eEEEE--e-CCceeEcC------CHHHHHHHHHHHhhccC
Confidence 67899999999999999875 4466677777765 57776 5 59999987 89999999999998764
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.47 E-value=3.4e-13 Score=124.76 Aligned_cols=181 Identities=16% Similarity=0.052 Sum_probs=123.1
Q ss_pred ccccccccccccccchhhHHHHHHhhhhcCceEeccCccccccC---CccchHHHhhcccceEeecCChhhHHhhhHHHH
Q 012210 155 SSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQER---LFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAA 231 (468)
Q Consensus 155 ~~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~---~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~ 231 (468)
..++-.|.+.|-...+..+++.|+ .||.|+++|..++... |... ...... ...++.... +|+.++
T Consensus 31 p~vv~lHG~g~~~~~~~~~~~~l~----~~~~vv~~d~~~~~~~g~~~~~~------~~~~~~-~~~~~~~~~-~~~~~~ 98 (223)
T 3b5e_A 31 ECLFLLHGSGVDETTLVPLARRIA----PTATLVAARGRIPQEDGFRWFER------IDPTRF-EQKSILAET-AAFAAF 98 (223)
T ss_dssp CEEEEECCTTBCTTTTHHHHHHHC----TTSEEEEECCSEEETTEEESSCE------EETTEE-CHHHHHHHH-HHHHHH
T ss_pred CEEEEEecCCCCHHHHHHHHHhcC----CCceEEEeCCCCCcCCccccccc------cCCCcc-cHHHHHHHH-HHHHHH
Confidence 335554555555566677777776 4999999997654221 1100 000000 001233444 888888
Q ss_pred HHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCc
Q 012210 232 MEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVV 311 (468)
Q Consensus 232 i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (468)
++++..+.+.+.++++++||||||.+++.++.++ +++++++|++++.....
T Consensus 99 i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-----~~~~~~~v~~~~~~~~~------------------------ 149 (223)
T 3b5e_A 99 TNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLH-----PGIVRLAALLRPMPVLD------------------------ 149 (223)
T ss_dssp HHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHS-----TTSCSEEEEESCCCCCS------------------------
T ss_pred HHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhC-----ccccceEEEecCccCcc------------------------
Confidence 8888877655446999999999999999999987 88899999998743210
Q ss_pred chHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccC
Q 012210 312 PLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIH 391 (468)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 391 (468)
. . ....
T Consensus 150 ---------------------------------~-------------~----------------------------~~~~ 155 (223)
T 3b5e_A 150 ---------------------------------H-------------V----------------------------PATD 155 (223)
T ss_dssp ---------------------------------S-------------C----------------------------CCCC
T ss_pred ---------------------------------c-------------c----------------------------cccc
Confidence 0 0 0113
Q ss_pred ccCccEEEEecCCCCcCCHHHHHHHHHhCCCC--ceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 392 KCNIPILAIAGDQDLICPPEAVEETVKLLPED--LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 392 ~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~--~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
.+++|+|+++|++|.++|++.++ +.+.++.. ..+++++ + ++|..+.+ ..+.+.+||++.
T Consensus 156 ~~~~P~li~~G~~D~~v~~~~~~-~~~~l~~~g~~~~~~~~--~-~gH~~~~~----------~~~~i~~~l~~~ 216 (223)
T 3b5e_A 156 LAGIRTLIIAGAADETYGPFVPA-LVTLLSRHGAEVDARII--P-SGHDIGDP----------DAAIVRQWLAGP 216 (223)
T ss_dssp CTTCEEEEEEETTCTTTGGGHHH-HHHHHHHTTCEEEEEEE--S-CCSCCCHH----------HHHHHHHHHHCC
T ss_pred ccCCCEEEEeCCCCCcCCHHHHH-HHHHHHHCCCceEEEEe--c-CCCCcCHH----------HHHHHHHHHHhh
Confidence 36799999999999999999988 88887643 4577777 7 88887653 235788888765
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.47 E-value=3.2e-13 Score=146.98 Aligned_cols=198 Identities=12% Similarity=0.050 Sum_probs=129.3
Q ss_pred hHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEE
Q 012210 172 DLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGH 251 (468)
Q Consensus 172 ~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGh 251 (468)
.++..++ ..+||.|+++|+.|++... ..+..... . .+.....+|+.++++++..+...+..+++++||
T Consensus 518 ~~~~~l~--~~~G~~v~~~d~rG~g~~~----~~~~~~~~----~--~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~ 585 (719)
T 1z68_A 518 NWISYLA--SKEGMVIALVDGRGTAFQG----DKLLYAVY----R--KLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGW 585 (719)
T ss_dssp CHHHHHH--HTTCCEEEEEECTTBSSSC----HHHHGGGT----T--CTTHHHHHHHHHHHHHHHTTSCEEEEEEEEEEE
T ss_pred hHHHHHH--hcCCeEEEEEcCCCCCCCc----hhhHHHHh----h--ccCcccHHHHHHHHHHHHhcCCCCCceEEEEEE
Confidence 3555443 0689999999999986531 11111110 0 122223489999999998864333358999999
Q ss_pred ehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCchhHH
Q 012210 252 SMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVF 331 (468)
Q Consensus 252 S~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (468)
||||.+++.+|.++ |++++++|+++|..+..... .
T Consensus 586 S~GG~~a~~~a~~~-----p~~~~~~v~~~~~~~~~~~~-----------------------~----------------- 620 (719)
T 1z68_A 586 SYGGYVSSLALASG-----TGLFKCGIAVAPVSSWEYYA-----------------------S----------------- 620 (719)
T ss_dssp THHHHHHHHHHTTS-----SSCCSEEEEESCCCCTTTSB-----------------------H-----------------
T ss_pred CHHHHHHHHHHHhC-----CCceEEEEEcCCccChHHhc-----------------------c-----------------
Confidence 99999999999886 78999999998865432110 0
Q ss_pred HHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCc-cEEEEecCCCCcCCH
Q 012210 332 SWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNI-PILAIAGDQDLICPP 410 (468)
Q Consensus 332 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~v-PvLiI~G~~D~ivp~ 410 (468)
.+...++..+.. ..... .+.. ......+.++++ |+|+++|++|.++|+
T Consensus 621 ~~~~~~~g~~~~---------------~~~~~---~~~~-------------~~~~~~~~~~~~~P~li~~G~~D~~v~~ 669 (719)
T 1z68_A 621 VYTERFMGLPTK---------------DDNLE---HYKN-------------STVMARAEYFRNVDYLLIHGTADDNVHF 669 (719)
T ss_dssp HHHHHHHCCSST---------------TTTHH---HHHH-------------TCSGGGGGGGTTSEEEEEEETTCSSSCT
T ss_pred ccchhhcCCccc---------------ccchh---hhhh-------------CCHhHHHhcCCCCcEEEEEeCCCCCcCH
Confidence 000000000000 00000 0000 011234677888 899999999999999
Q ss_pred HHHHHHHHhCCCC--ceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 411 EAVEETVKLLPED--LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 411 ~~~~~l~~~ip~~--~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
+.+.++++.++.. ..+++++ |+++|..+.+ .++.+++.|.+||+++.
T Consensus 670 ~~~~~~~~~l~~~~~~~~~~~~--~~~gH~~~~~------~~~~~~~~i~~fl~~~l 718 (719)
T 1z68_A 670 QNSAQIAKALVNAQVDFQAMWY--SDQNHGLSGL------STNHLYTHMTHFLKQCF 718 (719)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEE--TTCCTTCCTH------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCceEEEEE--CcCCCCCCcc------cHHHHHHHHHHHHHHhh
Confidence 9999998877643 3467777 8999988554 68999999999998764
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.46 E-value=3.2e-13 Score=148.05 Aligned_cols=199 Identities=12% Similarity=0.077 Sum_probs=128.8
Q ss_pred hHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEE
Q 012210 172 DLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGH 251 (468)
Q Consensus 172 ~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGh 251 (468)
.+...++ ..+||.|+++|..|+++.. ..+..... . .+.....+|+.++++++......+..+++++||
T Consensus 524 ~~~~~l~--~~~G~~Vv~~D~rG~g~~g----~~~~~~~~----~--~~~~~~~~D~~~~i~~l~~~~~~d~~ri~i~G~ 591 (740)
T 4a5s_A 524 NWATYLA--STENIIVASFDGRGSGYQG----DKIMHAIN----R--RLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGW 591 (740)
T ss_dssp SHHHHHH--HTTCCEEEEECCTTCSSSC----HHHHGGGT----T--CTTSHHHHHHHHHHHHHHTSTTEEEEEEEEEEE
T ss_pred CHHHHHH--hcCCeEEEEEcCCCCCcCC----hhHHHHHH----h--hhCcccHHHHHHHHHHHHhcCCcCCccEEEEEE
Confidence 3445555 0489999999999876421 11111111 0 111222489999999998654333358999999
Q ss_pred ehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCchhHH
Q 012210 252 SMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVF 331 (468)
Q Consensus 252 S~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (468)
||||.+++.+|.++ |+.++++|+++|..+..... .
T Consensus 592 S~GG~~a~~~a~~~-----p~~~~~~v~~~p~~~~~~~~------------------------~---------------- 626 (740)
T 4a5s_A 592 SYGGYVTSMVLGSG-----SGVFKCGIAVAPVSRWEYYD------------------------S---------------- 626 (740)
T ss_dssp THHHHHHHHHHTTT-----CSCCSEEEEESCCCCGGGSB------------------------H----------------
T ss_pred CHHHHHHHHHHHhC-----CCceeEEEEcCCccchHHhh------------------------h----------------
Confidence 99999999999987 88999999998865422100 0
Q ss_pred HHHHHhhhccc-cCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCc-cEEEEecCCCCcCC
Q 012210 332 SWLNNLISAED-MMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNI-PILAIAGDQDLICP 409 (468)
Q Consensus 332 ~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~v-PvLiI~G~~D~ivp 409 (468)
.+...++..+. ....+. +.. ......+.++++ |+|++||+.|.++|
T Consensus 627 ~~~~~~~~~p~~~~~~~~-------------------~~~-------------~~~~~~~~~i~~~P~Lii~G~~D~~v~ 674 (740)
T 4a5s_A 627 VYTERYMGLPTPEDNLDH-------------------YRN-------------STVMSRAENFKQVEYLLIHGTADDNVH 674 (740)
T ss_dssp HHHHHHHCCSSTTTTHHH-------------------HHH-------------SCSGGGGGGGGGSEEEEEEETTCSSSC
T ss_pred HHHHHHcCCCCccccHHH-------------------HHh-------------CCHHHHHhcCCCCcEEEEEcCCCCccC
Confidence 00000001000 000100 000 011245677887 99999999999999
Q ss_pred HHHHHHHHHhCCCC--ceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccC
Q 012210 410 PEAVEETVKLLPED--LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 466 (468)
Q Consensus 410 ~~~~~~l~~~ip~~--~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~ 466 (468)
++.+.++++.++.. ..+++++ |+++|..... +.++.+++.+.+||+++..
T Consensus 675 ~~~~~~l~~~l~~~g~~~~~~~~--~~~~H~~~~~-----~~~~~~~~~i~~fl~~~l~ 726 (740)
T 4a5s_A 675 FQQSAQISKALVDVGVDFQAMWY--TDEDHGIASS-----TAHQHIYTHMSHFIKQCFS 726 (740)
T ss_dssp THHHHHHHHHHHHTTCCCEEEEE--TTCCTTCCSH-----HHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHCCCCeEEEEE--CCCCCcCCCC-----ccHHHHHHHHHHHHHHHcC
Confidence 99999988887543 3466777 9999987332 2778999999999998753
|
| >3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.46 E-value=2.8e-13 Score=128.98 Aligned_cols=223 Identities=14% Similarity=0.118 Sum_probs=135.1
Q ss_pred cccccccccccchhhHHHHHHhhhhcCc--eEeccCccccccC-CccchHHHhhcccceEeec----CChhhHHhhhHHH
Q 012210 158 LERRQSSAIAIQIRDLSQNLVNMIEEGQ--LSVSPQLFDLQER-LFSTIDDFQKQLDLIVQYD----WDFDHYLEEDVPA 230 (468)
Q Consensus 158 l~~~~~~G~~~~i~~~a~~la~~l~~Gy--~viapdl~~~~~~-~~~~~~~l~~~~~~~~~~D----~~~~~~~~~D~~a 230 (468)
+-.|++.|-...++.+++.|+ ..|| .|+++|+..++.. +.+....-.........++ .++.+++ +++.+
T Consensus 10 vliHG~~~~~~~~~~l~~~L~---~~g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~-~~l~~ 85 (249)
T 3fle_A 10 LFLHGYGGSERSETFMVKQAL---NKNVTNEVITARVSSEGKVYFDKKLSEDAANPIVKVEFKDNKNGNFKENA-YWIKE 85 (249)
T ss_dssp EEECCTTCCGGGTHHHHHHHH---TTTSCSCEEEEEECSSCCEEESSCCC--CCSCEEEEEESSTTCCCHHHHH-HHHHH
T ss_pred EEECCCCCChhHHHHHHHHHH---HcCCCceEEEEEECCCCCEEEccccccccCCCeEEEEcCCCCCccHHHHH-HHHHH
Confidence 334667777778888999998 8886 6888888776541 2221110000111111121 1344555 89999
Q ss_pred HHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCC
Q 012210 231 AMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPV 310 (468)
Q Consensus 231 ~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (468)
+++++..+.+.. ++.+|||||||.+++.++..++.....++|+++|+++++....... ..+....
T Consensus 86 ~i~~l~~~~~~~--~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~---------~~~~~~~---- 150 (249)
T 3fle_A 86 VLSQLKSQFGIQ--QFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNM---------NENVNEI---- 150 (249)
T ss_dssp HHHHHHHTTCCC--EEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTT---------SSCTTTS----
T ss_pred HHHHHHHHhCCC--ceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCcccc---------cCCcchh----
Confidence 999999888776 9999999999999999999873221225899999999876543210 0000000
Q ss_pred cchHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCcccccccc
Q 012210 311 VPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHI 390 (468)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 390 (468)
.+.. ...+.... ..+..+.+ .+..+
T Consensus 151 --------~~~~---------------~g~p~~~~-----------------~~~~~l~~---------------~~~~~ 175 (249)
T 3fle_A 151 --------IVDK---------------QGKPSRMN-----------------AAYRQLLS---------------LYKIY 175 (249)
T ss_dssp --------CBCT---------------TCCBSSCC-----------------HHHHHTGG---------------GHHHH
T ss_pred --------hhcc---------------cCCCcccC-----------------HHHHHHHH---------------HHhhC
Confidence 0000 00000000 11111100 12345
Q ss_pred CccCccEEEEecC------CCCcCCHHHHHHHHHhCCCCceeEEEecCCC--CCCCCcccccccccchhhHHHHHHHHH
Q 012210 391 HKCNIPILAIAGD------QDLICPPEAVEETVKLLPEDLVTYKVFGEPS--GPHYAHYDLVGGRMAVEQVYPCIVQFL 461 (468)
Q Consensus 391 ~~I~vPvLiI~G~------~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~--agH~~H~e~~~~~~~pe~v~~~I~~FL 461 (468)
++.++|+|.|+|+ .|.+||...++.+...+++....+..+.+.+ +.|....+ . .+|.+.|.+||
T Consensus 176 p~~~~~vl~I~G~~~~~~~sDG~V~~~Sa~~~~~l~~~~~~~y~e~~v~g~~a~Hs~l~~------n-~~V~~~I~~FL 247 (249)
T 3fle_A 176 CGKEIEVLNIYGDLEDGSHSDGRVSNSSSQSLQYLLRGSTKSYQEMKFKGAKAQHSQLHE------N-KDVANEIIQFL 247 (249)
T ss_dssp TTTTCEEEEEEEECCSSSCBSSSSBHHHHHTHHHHSTTCSSEEEEEEEESGGGSTGGGGG------C-HHHHHHHHHHH
T ss_pred CccCCeEEEEeccCCCCCCCCCcccHHHHHHHHHHHhhCCCceEEEEEeCCCCchhcccc------C-HHHHHHHHHHh
Confidence 5578999999998 6999999999988888886544443221133 66755553 3 58999999997
|
| >3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=99.44 E-value=3e-13 Score=129.49 Aligned_cols=225 Identities=10% Similarity=0.099 Sum_probs=126.7
Q ss_pred cccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHH
Q 012210 156 SLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYI 235 (468)
Q Consensus 156 ~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l 235 (468)
.++-.|.+.|-...++.++. | ..||.|+++|+.|++.. + ...+++++++ +|+.+.++.+
T Consensus 23 ~lv~lhg~~~~~~~~~~~~~-l----~~~~~v~~~d~~G~~~~-----~----------~~~~~~~~~~-~~~~~~i~~~ 81 (265)
T 3ils_A 23 TLFMLPDGGGSAFSYASLPR-L----KSDTAVVGLNCPYARDP-----E----------NMNCTHGAMI-ESFCNEIRRR 81 (265)
T ss_dssp EEEEECCTTCCGGGGTTSCC-C----SSSEEEEEEECTTTTCG-----G----------GCCCCHHHHH-HHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHh-c----CCCCEEEEEECCCCCCC-----C----------CCCCCHHHHH-HHHHHHHHHh
Confidence 34554555555555555554 3 58999999999886321 0 0124677776 7777777766
Q ss_pred HhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHh
Q 012210 236 RAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGA 315 (468)
Q Consensus 236 ~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (468)
... ++++++||||||.+++.+|.++. ..+.++.++|+++++......... .....
T Consensus 82 ~~~-----~~~~l~GhS~Gg~ia~~~a~~l~--~~~~~v~~lvl~~~~~~~~~~~~~------------------~~~~~ 136 (265)
T 3ils_A 82 QPR-----GPYHLGGWSSGGAFAYVVAEALV--NQGEEVHSLIIIDAPIPQAMEQLP------------------RAFYE 136 (265)
T ss_dssp CSS-----CCEEEEEETHHHHHHHHHHHHHH--HTTCCEEEEEEESCCSSCCCCCCC------------------HHHHH
T ss_pred CCC-----CCEEEEEECHhHHHHHHHHHHHH--hCCCCceEEEEEcCCCCCcccccC------------------HHHHH
Confidence 321 38999999999999999998431 115679999999875442211000 00001
Q ss_pred HHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCc
Q 012210 316 LLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNI 395 (468)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~v 395 (468)
++..+......+ ......+.+ ........+....+.+.. +. .....+++|
T Consensus 137 ~~~~~~~~~~~~-----------~~~~~~~~~---------~~~~~~~~~~~~~~~~~~---------~~-~~~~~~i~~ 186 (265)
T 3ils_A 137 HCNSIGLFATQP-----------GASPDGSTE---------PPSYLIPHFTAVVDVMLD---------YK-LAPLHARRM 186 (265)
T ss_dssp HHHHTTTTTTSS-----------SSCSSSCSC---------CCTTHHHHHHHHHHHTTT---------CC-CCCCCCSSC
T ss_pred HHHHHHHhCCCc-----------cccccCCHH---------HHHHHHHHHHHHHHHHHh---------cC-CCCCccCCC
Confidence 111110000000 000000000 000000011111111110 00 123457999
Q ss_pred cEE-EEecCC---CCcC--------------CHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHH
Q 012210 396 PIL-AIAGDQ---DLIC--------------PPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCI 457 (468)
Q Consensus 396 PvL-iI~G~~---D~iv--------------p~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I 457 (468)
|++ +++|++ |..+ +......+.+..+..+.+++++ ++++|+.+++ .+.++++.+.|
T Consensus 187 P~~lii~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~i--~gagH~~~~~----~e~~~~v~~~i 260 (265)
T 3ils_A 187 PKVGIVWAADTVMDERDAPKMKGMHFMIQKRTEFGPDGWDTIMPGASFDIVRA--DGANHFTLMQ----KEHVSIISDLI 260 (265)
T ss_dssp CEEEEEEEEECSSCTTTSCCCSSCCTTTSCCCCCSCTTHHHHSTTCCEEEEEE--EEEETTGGGS----TTTTHHHHHHH
T ss_pred CeEEEEEccCCCCccccCccccCcchhhccccccCcchHHHhCCccceeEEEc--CCCCcceeeC----hhhHHHHHHHH
Confidence 988 999999 9988 4445566777777345688888 8889999932 12889999999
Q ss_pred HHHHh
Q 012210 458 VQFLG 462 (468)
Q Consensus 458 ~~FL~ 462 (468)
.+||.
T Consensus 261 ~~fL~ 265 (265)
T 3ils_A 261 DRVMA 265 (265)
T ss_dssp HHHTC
T ss_pred HHHhC
Confidence 99974
|
| >2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A | Back alignment and structure |
|---|
Probab=99.44 E-value=1.7e-12 Score=128.49 Aligned_cols=212 Identities=14% Similarity=0.159 Sum_probs=117.0
Q ss_pred hhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcC------CCC
Q 012210 170 IRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSK------PKD 243 (468)
Q Consensus 170 i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~------~~~ 243 (468)
...++..|+ ...||.|+++|+.+... ..+.... +|+.++++++..+.. .+.
T Consensus 104 ~~~~~~~la--~~~g~~vv~~d~rg~~~--------------------~~~~~~~-~d~~~~~~~l~~~~~~~~~~~~d~ 160 (338)
T 2o7r_A 104 FHDFCCEMA--VHAGVVIASVDYRLAPE--------------------HRLPAAY-DDAMEALQWIKDSRDEWLTNFADF 160 (338)
T ss_dssp HHHHHHHHH--HHHTCEEEEEECCCTTT--------------------TCTTHHH-HHHHHHHHHHHTCCCHHHHHHEEE
T ss_pred HHHHHHHHH--HHCCcEEEEecCCCCCC--------------------CCCchHH-HHHHHHHHHHHhCCcchhhccCCc
Confidence 455666664 14799999999887532 0222333 899999999987521 111
Q ss_pred CcEEEEEEehhHHHHHHHHHhcCCCCCcc--------cccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHh
Q 012210 244 GKLLAIGHSMGGILLYAMLSRCGFEGRES--------RLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGA 315 (468)
Q Consensus 244 ~~v~lvGhS~GG~ia~~~a~~~~~~~~p~--------~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (468)
++++++||||||.+++.+|.++ ++ +|+++|+++|.............. ...+....
T Consensus 161 ~~v~l~G~S~GG~ia~~~a~~~-----~~~~~~~~~~~v~~~vl~~p~~~~~~~~~~~~~~---------~~~~~~~~-- 224 (338)
T 2o7r_A 161 SNCFIMGESAGGNIAYHAGLRA-----AAVADELLPLKIKGLVLDEPGFGGSKRTGSELRL---------ANDSRLPT-- 224 (338)
T ss_dssp EEEEEEEETHHHHHHHHHHHHH-----HTTHHHHTTCCEEEEEEESCCCCCSSCCHHHHHT---------TTCSSSCH--
T ss_pred ceEEEEEeCccHHHHHHHHHHh-----ccccccCCCCceeEEEEECCccCCCcCChhhhcc---------CCCcccCH--
Confidence 3899999999999999999986 55 899999999876543321110000 00000000
Q ss_pred HHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCc
Q 012210 316 LLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNI 395 (468)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~v 395 (468)
.....+....+......+ .... .+ +... ........+.++.+
T Consensus 225 ------------~~~~~~~~~~~~~~~~~~---------~~~~-~~---------------~~~~-~~~~~~~~l~~~~~ 266 (338)
T 2o7r_A 225 ------------FVLDLIWELSLPMGADRD---------HEYC-NP---------------TAES-EPLYSFDKIRSLGW 266 (338)
T ss_dssp ------------HHHHHHHHHHSCTTCCTT---------STTT-CC---------------C-----CCTHHHHHHHHTC
T ss_pred ------------HHHHHHHHHhCCCCCCCC---------Cccc-CC---------------CCCC-cccccHhhhcCCCC
Confidence 000000000000000000 0000 00 0000 00000123345677
Q ss_pred cEEEEecCCCCcCCHH--HHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 396 PILAIAGDQDLICPPE--AVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 396 PvLiI~G~~D~ivp~~--~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
|+|+++|++|.+++.. .++.+.+..+ .++++++ ++++|..+.. ..+..+++.+.|.+||+++.
T Consensus 267 P~Lvi~G~~D~~~~~~~~~~~~l~~~~~--~~~~~~~--~g~gH~~~~~---~~~~~~~~~~~i~~Fl~~~~ 331 (338)
T 2o7r_A 267 RVMVVGCHGDPMIDRQMELAERLEKKGV--DVVAQFD--VGGYHAVKLE---DPEKAKQFFVILKKFVVDSC 331 (338)
T ss_dssp EEEEEEETTSTTHHHHHHHHHHHHHTTC--EEEEEEE--SSCCTTGGGT---CHHHHHHHHHHHHHHHC---
T ss_pred CEEEEECCCCcchHHHHHHHHHHHHCCC--cEEEEEE--CCCceEEecc---ChHHHHHHHHHHHHHHHhhc
Confidence 9999999999998733 1333333323 4578887 8999988764 11244889999999998774
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.42 E-value=3.5e-12 Score=138.84 Aligned_cols=206 Identities=19% Similarity=0.205 Sum_probs=130.9
Q ss_pred chhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEE
Q 012210 169 QIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLA 248 (468)
Q Consensus 169 ~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~l 248 (468)
........|+ .+||.|+++|+.|+++.. ..+...+.. . ..... .+|+.+++++|..+...+.+++++
T Consensus 463 ~~~~~~~~l~---~~G~~v~~~d~rG~g~~g----~~~~~~~~~----~-~~~~~-~~D~~~~~~~l~~~~~~~~~~i~i 529 (695)
T 2bkl_A 463 NFRSSILPWL---DAGGVYAVANLRGGGEYG----KAWHDAGRL----D-KKQNV-FDDFHAAAEYLVQQKYTQPKRLAI 529 (695)
T ss_dssp CCCGGGHHHH---HTTCEEEEECCTTSSTTC----HHHHHTTSG----G-GTHHH-HHHHHHHHHHHHHTTSCCGGGEEE
T ss_pred CcCHHHHHHH---hCCCEEEEEecCCCCCcC----HHHHHhhHh----h-cCCCc-HHHHHHHHHHHHHcCCCCcccEEE
Confidence 3344445566 899999999999976521 122212211 1 11222 399999999998775444468999
Q ss_pred EEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCch
Q 012210 249 IGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPP 328 (468)
Q Consensus 249 vGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (468)
+||||||.+++.++.++ |+.++++|+.+|..+...... . +.+.
T Consensus 530 ~G~S~GG~la~~~~~~~-----p~~~~~~v~~~~~~d~~~~~~----------------~---~~~~------------- 572 (695)
T 2bkl_A 530 YGGSNGGLLVGAAMTQR-----PELYGAVVCAVPLLDMVRYHL----------------F---GSGR------------- 572 (695)
T ss_dssp EEETHHHHHHHHHHHHC-----GGGCSEEEEESCCCCTTTGGG----------------S---TTGG-------------
T ss_pred EEECHHHHHHHHHHHhC-----CcceEEEEEcCCccchhhccc----------------c---CCCc-------------
Confidence 99999999999999986 889999999988765432100 0 0000
Q ss_pred hHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccC--ccEEEEecCCCC
Q 012210 329 YVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCN--IPILAIAGDQDL 406 (468)
Q Consensus 329 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~--vPvLiI~G~~D~ 406 (468)
.+...+ ..+ .+++.+. .+ ..+. ....+.+++ +|+|+++|++|.
T Consensus 573 ---~~~~~~-g~~--~~~~~~~----------------~~-~~~s------------p~~~~~~~~~~~P~Li~~G~~D~ 617 (695)
T 2bkl_A 573 ---TWIPEY-GTA--EKPEDFK----------------TL-HAYS------------PYHHVRPDVRYPALLMMAADHDD 617 (695)
T ss_dssp ---GGHHHH-CCT--TSHHHHH----------------HH-HHHC------------GGGCCCSSCCCCEEEEEEETTCS
T ss_pred ---chHHHh-CCC--CCHHHHH----------------HH-HhcC------------hHhhhhhcCCCCCEEEEeeCCCC
Confidence 000000 000 0111111 11 1110 113445555 699999999999
Q ss_pred cCCHHHHHHHHHhCCC-----CceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 407 ICPPEAVEETVKLLPE-----DLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 407 ivp~~~~~~l~~~ip~-----~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
.+|+..+.++++.++. ..+.++++ ++++|..... ...+.++...+.+||.++.
T Consensus 618 ~v~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~gH~~~~~----~~~~~~~~~~~~~fl~~~l 675 (695)
T 2bkl_A 618 RVDPMHARKFVAAVQNSPGNPATALLRIE--ANAGHGGADQ----VAKAIESSVDLYSFLFQVL 675 (695)
T ss_dssp SSCTHHHHHHHHHHHTSTTCCSCEEEEEE--TTCBTTBCSC----HHHHHHHHHHHHHHHHHHT
T ss_pred CCChHHHHHHHHHHHhhccCCCCEEEEEe--CCCCcCCCCC----HHHHHHHHHHHHHHHHHHc
Confidence 9999999999888754 34677777 8999987431 1256778889999998875
|
| >3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A | Back alignment and structure |
|---|
Probab=99.42 E-value=7.3e-12 Score=123.36 Aligned_cols=209 Identities=17% Similarity=0.109 Sum_probs=122.6
Q ss_pred ccccchhhHHHHHHhhhhc-CceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCC
Q 012210 165 AIAIQIRDLSQNLVNMIEE-GQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKD 243 (468)
Q Consensus 165 G~~~~i~~~a~~la~~l~~-Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~ 243 (468)
|-......++..|+ .. ||.|+++|+.+... ..+.... +|+.++++++..+ +.+.
T Consensus 94 g~~~~~~~~~~~la---~~~g~~v~~~dyr~~~~--------------------~~~~~~~-~d~~~a~~~l~~~-~~~~ 148 (322)
T 3k6k_A 94 GSPSTHLVLTTQLA---KQSSATLWSLDYRLAPE--------------------NPFPAAV-DDCVAAYRALLKT-AGSA 148 (322)
T ss_dssp CCHHHHHHHHHHHH---HHHTCEEEEECCCCTTT--------------------SCTTHHH-HHHHHHHHHHHHH-HSSG
T ss_pred CChHHHHHHHHHHH---HhcCCEEEEeeCCCCCC--------------------CCCchHH-HHHHHHHHHHHHc-CCCC
Confidence 33444566667776 54 99999999875432 1233444 8999999999887 3333
Q ss_pred CcEEEEEEehhHHHHHHHHHhcCCCCCccc----ccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHH
Q 012210 244 GKLLAIGHSMGGILLYAMLSRCGFEGRESR----LAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTA 319 (468)
Q Consensus 244 ~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~----V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (468)
++++++|||+||.+++.+|.++ +++ ++++|+++|..+............
T Consensus 149 ~~i~l~G~S~GG~la~~~a~~~-----~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~---------------------- 201 (322)
T 3k6k_A 149 DRIIIAGDSAGGGLTTASMLKA-----KEDGLPMPAGLVMLSPFVDLTLSRWSNSNLA---------------------- 201 (322)
T ss_dssp GGEEEEEETHHHHHHHHHHHHH-----HHTTCCCCSEEEEESCCCCTTCCSHHHHHTG----------------------
T ss_pred ccEEEEecCccHHHHHHHHHHH-----HhcCCCCceEEEEecCCcCcccCccchhhcc----------------------
Confidence 5999999999999999999986 443 999999998776543321111000
Q ss_pred hcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEE
Q 012210 320 AYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILA 399 (468)
Q Consensus 320 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLi 399 (468)
..........+.. +...+....-............ .+..+|+|+
T Consensus 202 -------------------~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~sp~~~~-~~~~pP~li 245 (322)
T 3k6k_A 202 -------------------DRDFLAEPDTLGE----------------MSELYVGGEDRKNPLISPVYAD-LSGLPEMLI 245 (322)
T ss_dssp -------------------GGCSSSCHHHHHH----------------HHHHHHTTSCTTCTTTCGGGSC-CTTCCCEEE
T ss_pred -------------------CCCCcCCHHHHHH----------------HHHHhcCCCCCCCCcCCccccc-ccCCCcEEE
Confidence 0000001111111 1111100000000000000111 123369999
Q ss_pred EecCCCCcCCHHHHHHHHHhCCC--CceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccC
Q 012210 400 IAGDQDLICPPEAVEETVKLLPE--DLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 466 (468)
Q Consensus 400 I~G~~D~ivp~~~~~~l~~~ip~--~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~ 466 (468)
++|++|.++ ..+..+.+.+.. ..++++++ |+++|..+... .....++++.+.|.+||+++..
T Consensus 246 ~~G~~D~~~--~~~~~~~~~l~~~g~~~~l~~~--~g~~H~~~~~~-~~~~~~~~~~~~i~~fl~~~l~ 309 (322)
T 3k6k_A 246 HVGSEEALL--SDSTTLAERAGAAGVSVELKIW--PDMPHVFQMYG-KFVNAADISIKEICHWISARIS 309 (322)
T ss_dssp EEESSCTTH--HHHHHHHHHHHHTTCCEEEEEE--TTCCTTGGGGT-TTCHHHHHHHHHHHHHHHTTCC
T ss_pred EECCcCccH--HHHHHHHHHHHHCCCCEEEEEE--CCCcccccccc-ccChHHHHHHHHHHHHHHHHHh
Confidence 999999884 455666555543 24578887 99999765421 0012568899999999998753
|
| >2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A | Back alignment and structure |
|---|
Probab=99.42 E-value=2e-12 Score=126.13 Aligned_cols=100 Identities=18% Similarity=0.157 Sum_probs=72.8
Q ss_pred ccccccchhhHHHHHHhhhhc-CceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhc--
Q 012210 163 SSAIAIQIRDLSQNLVNMIEE-GQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQS-- 239 (468)
Q Consensus 163 ~~G~~~~i~~~a~~la~~l~~-Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~-- 239 (468)
..|-......+++.|+ .+ ||.|+++|+.++++. .+.... +|+.++++++....
T Consensus 86 ~~g~~~~~~~~~~~la---~~~g~~v~~~d~rg~~~~--------------------~~~~~~-~d~~~~~~~l~~~~~~ 141 (310)
T 2hm7_A 86 VVGDLETHDPVCRVLA---KDGRAVVFSVDYRLAPEH--------------------KFPAAV-EDAYDALQWIAERAAD 141 (310)
T ss_dssp TSCCTTTTHHHHHHHH---HHHTSEEEEECCCCTTTS--------------------CTTHHH-HHHHHHHHHHHHTTGG
T ss_pred ccCChhHhHHHHHHHH---HhcCCEEEEeCCCCCCCC--------------------CCCccH-HHHHHHHHHHHhhHHH
Confidence 4455566777888888 75 999999999876431 233444 89999999998764
Q ss_pred -CCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccC
Q 012210 240 -KPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYT 287 (468)
Q Consensus 240 -~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~ 287 (468)
+.+..+++++||||||.+++.+|.+++... .+.++++|+++|..+..
T Consensus 142 ~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~-~~~v~~~vl~~p~~~~~ 189 (310)
T 2hm7_A 142 FHLDPARIAVGGDSAGGNLAAVTSILAKERG-GPALAFQLLIYPSTGYD 189 (310)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHHHHHHHTT-CCCCCCEEEESCCCCCC
T ss_pred hCCCcceEEEEEECHHHHHHHHHHHHHHhcC-CCCceEEEEEcCCcCCC
Confidence 222348999999999999999998861100 12699999999876643
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.42 E-value=1.4e-12 Score=141.57 Aligned_cols=200 Identities=12% Similarity=0.106 Sum_probs=127.6
Q ss_pred hHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEE
Q 012210 172 DLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGH 251 (468)
Q Consensus 172 ~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGh 251 (468)
..+..++ .+||.|+++|+.|+++. ...+..... . .+.....+|+.++++++..+...+..+++++||
T Consensus 519 ~~~~~l~---~~G~~vv~~d~rG~g~~----g~~~~~~~~----~--~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~ 585 (723)
T 1xfd_A 519 WETVMVS---SHGAVVVKCDGRGSGFQ----GTKLLHEVR----R--RLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGK 585 (723)
T ss_dssp HHHHHHH---TTCCEEECCCCTTCSSS----HHHHHHTTT----T--CTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEE
T ss_pred HHHHHhh---cCCEEEEEECCCCCccc----cHHHHHHHH----h--ccCcccHHHHHHHHHHHHhCCCcChhhEEEEEE
Confidence 3455566 78999999999987652 111111111 0 111223489999999988764333358999999
Q ss_pred ehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCchhHH
Q 012210 252 SMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVF 331 (468)
Q Consensus 252 S~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (468)
||||.+++.+|.++.. ..|++++++|++++..+..... .
T Consensus 586 S~GG~~a~~~a~~~~~-~~p~~~~~~v~~~~~~~~~~~~-----------------------~----------------- 624 (723)
T 1xfd_A 586 DYGGYLSTYILPAKGE-NQGQTFTCGSALSPITDFKLYA-----------------------S----------------- 624 (723)
T ss_dssp THHHHHHHHCCCCSSS-TTCCCCSEEEEESCCCCTTSSB-----------------------H-----------------
T ss_pred CHHHHHHHHHHHhccc-cCCCeEEEEEEccCCcchHHhh-----------------------h-----------------
Confidence 9999999999876300 0146899999988865432110 0
Q ss_pred HHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccC-ccEEEEecCCCCcCCH
Q 012210 332 SWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCN-IPILAIAGDQDLICPP 410 (468)
Q Consensus 332 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~-vPvLiI~G~~D~ivp~ 410 (468)
.+...++..+. ..+. .+ ........+.+++ +|+|+++|++|.++|+
T Consensus 625 ~~~~~~~~~~~----------------~~~~-------------~~----~~~~~~~~~~~~~~~P~lii~G~~D~~v~~ 671 (723)
T 1xfd_A 625 AFSERYLGLHG----------------LDNR-------------AY----EMTKVAHRVSALEEQQFLIIHPTADEKIHF 671 (723)
T ss_dssp HHHHHHHCCCS----------------SCCS-------------ST----TTTCTHHHHTSCCSCEEEEEEETTCSSSCH
T ss_pred hccHhhcCCcc----------------CChh-------------HH----HhcChhhHHhhcCCCCEEEEEeCCCCCcCH
Confidence 00000000000 0000 00 0001123456788 8999999999999999
Q ss_pred HHHHHHHHhCCC--CceeEEEecCCCCCCCC-cccccccccchhhHHHHHHHHHhhccC
Q 012210 411 EAVEETVKLLPE--DLVTYKVFGEPSGPHYA-HYDLVGGRMAVEQVYPCIVQFLGRYDS 466 (468)
Q Consensus 411 ~~~~~l~~~ip~--~~~~~~v~~~~~agH~~-H~e~~~~~~~pe~v~~~I~~FL~~~~~ 466 (468)
+.++++++.++. ...+++++ |+++|.. +.+ .++.+++.|.+||+++..
T Consensus 672 ~~~~~~~~~l~~~~~~~~~~~~--~~~~H~~~~~~------~~~~~~~~i~~fl~~~l~ 722 (723)
T 1xfd_A 672 QHTAELITQLIRGKANYSLQIY--PDESHYFTSSS------LKQHLYRSIINFFVECFR 722 (723)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEE--TTCCSSCCCHH------HHHHHHHHHHHHHTTTTC
T ss_pred hHHHHHHHHHHHCCCCeEEEEE--CCCCcccccCc------chHHHHHHHHHHHHHHhc
Confidence 999999887743 24477887 9999987 444 789999999999998753
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A | Back alignment and structure |
|---|
Probab=99.42 E-value=2.5e-13 Score=132.29 Aligned_cols=194 Identities=14% Similarity=0.114 Sum_probs=125.6
Q ss_pred ccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHh---hcCC
Q 012210 165 AIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRA---QSKP 241 (468)
Q Consensus 165 G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~---~~~~ 241 (468)
|-......+++.|+ .+||.|+++|+.+... ..+.... +|+.++++++.. ..+.
T Consensus 96 ~~~~~~~~~~~~l~---~~G~~v~~~d~r~~~~--------------------~~~~~~~-~d~~~~~~~l~~~~~~~~~ 151 (303)
T 4e15_A 96 MDMSMSCSIVGPLV---RRGYRVAVMDYNLCPQ--------------------VTLEQLM-TQFTHFLNWIFDYTEMTKV 151 (303)
T ss_dssp CCGGGSCTTHHHHH---HTTCEEEEECCCCTTT--------------------SCHHHHH-HHHHHHHHHHHHHHHHTTC
T ss_pred CChhHHHHHHHHHH---hCCCEEEEecCCCCCC--------------------CChhHHH-HHHHHHHHHHHHHhhhcCC
Confidence 44455667888888 8999999999876533 1234444 889999999876 3443
Q ss_pred CCCcEEEEEEehhHHHHHHHHHhcCCCCCc--ccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHH
Q 012210 242 KDGKLLAIGHSMGGILLYAMLSRCGFEGRE--SRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTA 319 (468)
Q Consensus 242 ~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p--~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (468)
++++++||||||.+++.++.+......| .+++++|++++..+..... . . . .
T Consensus 152 --~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~~~~~---~-~-----------~-----~----- 204 (303)
T 4e15_A 152 --SSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDLRELS---N-L-----------E-----S----- 204 (303)
T ss_dssp --SCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCCHHHH---T-C-----------T-----T-----
T ss_pred --CeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEEeeeeccHhhh---c-c-----------c-----c-----
Confidence 4999999999999999999763110112 3899999998875532100 0 0 0 0
Q ss_pred hcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccC----ccCc
Q 012210 320 AYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIH----KCNI 395 (468)
Q Consensus 320 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~I~v 395 (468)
.+....+.. +++.+ .. .......+. ++++
T Consensus 205 ------------~~~~~~~~~----~~~~~----------------------------~~---~sp~~~~~~~~~~~~~~ 237 (303)
T 4e15_A 205 ------------VNPKNILGL----NERNI----------------------------ES---VSPMLWEYTDVTVWNST 237 (303)
T ss_dssp ------------TSGGGTTCC----CTTTT----------------------------TT---TCGGGCCCCCGGGGTTS
T ss_pred ------------cchhhhhcC----CHHHH----------------------------HH---cCchhhcccccccCCCC
Confidence 000000000 00000 00 000012233 3489
Q ss_pred cEEEEecCCCCcCCHHHHHHHHHhCCCC--ceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 396 PILAIAGDQDLICPPEAVEETVKLLPED--LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 396 PvLiI~G~~D~ivp~~~~~~l~~~ip~~--~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
|+|+++|++|.+++++.++.+++.++.. .++++++ ++++|+...+ ........+.+||.+.
T Consensus 238 P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~--~g~~H~~~~~------~~~~~~~~l~~~l~~~ 300 (303)
T 4e15_A 238 KIYVVAAEHDSTTFIEQSRHYADVLRKKGYKASFTLF--KGYDHFDIIE------ETAIDDSDVSRFLRNI 300 (303)
T ss_dssp EEEEEEEEESCHHHHHHHHHHHHHHHHHTCCEEEEEE--EEEETTHHHH------GGGSTTSHHHHHHHHH
T ss_pred CEEEEEeCCCCCCchHHHHHHHHHHHHCCCceEEEEe--CCCCchHHHH------HHhCCCcHHHHHHHHh
Confidence 9999999999999999999999888632 5678887 8889988877 5566777777777654
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.42 E-value=3e-12 Score=119.38 Aligned_cols=197 Identities=16% Similarity=0.112 Sum_probs=116.9
Q ss_pred cccccccccccccchhhHHHHHHhh--hhcCceEeccCccccccCCc---cchHHHhhcc--cceEeecCChhhHHhhhH
Q 012210 156 SLLERRQSSAIAIQIRDLSQNLVNM--IEEGQLSVSPQLFDLQERLF---STIDDFQKQL--DLIVQYDWDFDHYLEEDV 228 (468)
Q Consensus 156 ~ll~~~~~~G~~~~i~~~a~~la~~--l~~Gy~viapdl~~~~~~~~---~~~~~l~~~~--~~~~~~D~~~~~~~~~D~ 228 (468)
.++-.|.+.|-...+..+++.|+.- ...||.+++|+...+..... .....+...+ ........++.++. +++
T Consensus 25 ~vv~lHG~g~~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~~l 103 (239)
T 3u0v_A 25 SLIFLHGSGDSGQGLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDCPEHLESIDVMC-QVL 103 (239)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSSSSSCCCHHHHHHHH-HHH
T ss_pred EEEEEecCCCchhhHHHHHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCCcccccchhhHHHHH-HHH
Confidence 3455344444444455667776610 12479999998754311000 0000000000 00000011234444 666
Q ss_pred HHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCC
Q 012210 229 PAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNV 308 (468)
Q Consensus 229 ~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (468)
..+++.+.. .+.+..+++++||||||.+++.+|.++ +++++++|++++........
T Consensus 104 ~~~~~~~~~-~~~~~~~~~l~G~S~Gg~~a~~~a~~~-----~~~~~~~v~~~~~~~~~~~~------------------ 159 (239)
T 3u0v_A 104 TDLIDEEVK-SGIKKNRILIGGFSMGGCMAMHLAYRN-----HQDVAGVFALSSFLNKASAV------------------ 159 (239)
T ss_dssp HHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHHH-----CTTSSEEEEESCCCCTTCHH------------------
T ss_pred HHHHHHHHH-hCCCcccEEEEEEChhhHHHHHHHHhC-----ccccceEEEecCCCCchhHH------------------
Confidence 666666543 333345999999999999999999987 88999999998754421100
Q ss_pred CCcchHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCcccccc
Q 012210 309 PVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKD 388 (468)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (468)
... +
T Consensus 160 ----------------------------------------~~~--------------------~---------------- 163 (239)
T 3u0v_A 160 ----------------------------------------YQA--------------------L---------------- 163 (239)
T ss_dssp ----------------------------------------HHH--------------------H----------------
T ss_pred ----------------------------------------HHH--------------------H----------------
Confidence 000 0
Q ss_pred ccCccCcc-EEEEecCCCCcCCHHHHHHHHHhCCC--CceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 389 HIHKCNIP-ILAIAGDQDLICPPEAVEETVKLLPE--DLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 389 ~l~~I~vP-vLiI~G~~D~ivp~~~~~~l~~~ip~--~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
......+| +|+++|++|.++|.+.++.+.+.++. ...+++++ ++++|..+.+ ..+.+.+||+++.
T Consensus 164 ~~~~~~~pp~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~--~g~~H~~~~~----------~~~~~~~~l~~~l 231 (239)
T 3u0v_A 164 QKSNGVLPELFQCHGTADELVLHSWAEETNSMLKSLGVTTKFHSF--PNVYHELSKT----------ELDILKLWILTKL 231 (239)
T ss_dssp HHCCSCCCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEE--TTCCSSCCHH----------HHHHHHHHHHHHC
T ss_pred HhhccCCCCEEEEeeCCCCccCHHHHHHHHHHHHHcCCcEEEEEe--CCCCCcCCHH----------HHHHHHHHHHHhC
Confidence 00223566 99999999999999988888887763 24577887 8889987743 3556667776653
|
| >1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.41 E-value=2.5e-12 Score=128.87 Aligned_cols=223 Identities=15% Similarity=0.067 Sum_probs=127.0
Q ss_pred cccc--chhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhc---
Q 012210 165 AIAI--QIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQS--- 239 (468)
Q Consensus 165 G~~~--~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~--- 239 (468)
|-.. ....+++.|+ .+||.|+++|+.++++. . + +..+.... .|+.++++++....
T Consensus 123 g~~~~~~~~~~~~~la---~~g~~vv~~d~r~~gg~-~---------~------~~~~~~~~-~D~~~~~~~v~~~~~~~ 182 (361)
T 1jkm_A 123 LTTDNRVHRRWCTDLA---AAGSVVVMVDFRNAWTA-E---------G------HHPFPSGV-EDCLAAVLWVDEHRESL 182 (361)
T ss_dssp SCSSSHHHHHHHHHHH---HTTCEEEEEECCCSEET-T---------E------ECCTTHHH-HHHHHHHHHHHHTHHHH
T ss_pred CCCcccchhHHHHHHH---hCCCEEEEEecCCCCCC-C---------C------CCCCCccH-HHHHHHHHHHHhhHHhc
Confidence 4444 5667788888 79999999999887531 0 0 01222333 88888999888653
Q ss_pred CCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHH
Q 012210 240 KPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTA 319 (468)
Q Consensus 240 ~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (468)
+.+ +++++|||+||.+++.++......+.|++++++|++++..+......... ...
T Consensus 183 ~~~--~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~il~~~~~~~~~~~~~~~----------------------~~~ 238 (361)
T 1jkm_A 183 GLS--GVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISGGYAWDHER----------------------RLT 238 (361)
T ss_dssp TEE--EEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCCCTTSCHHH----------------------HHH
T ss_pred CCC--eEEEEEECHHHHHHHHHHHHHHhcCCCcCcceEEEECCcccccccccccc----------------------ccc
Confidence 444 99999999999999999987211111668999999998765421100000 000
Q ss_pred hcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCccccc---CCc-cccccccCccCc
Q 012210 320 AYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDR---GGK-FFYKDHIHKCNI 395 (468)
Q Consensus 320 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~l~~I~v 395 (468)
.. ..+... .........+. .+...+........ ... ......+.++.
T Consensus 239 ~~---------~~~~~~---~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~l~- 289 (361)
T 1jkm_A 239 EL---------PSLVEN---DGYFIENGGMA----------------LLVRAYDPTGEHAEDPIAWPYFASEDELRGLP- 289 (361)
T ss_dssp HC---------THHHHT---TTSSSCHHHHH----------------HHHHHHSSSSTTTTCTTTCGGGCCHHHHTTCC-
T ss_pred cC---------cchhhc---cCcccCHHHHH----------------HHHHHhCCCCCCCCCcccCccccChhhHcCCC-
Confidence 00 000000 00001111111 11111110000000 000 00123456666
Q ss_pred cEEEEecCCCCcCCHHHHHHHHHhCCCC--ceeEEEecCCCCCCCCc-ccccccccch-hhHHHHHHHHHhhcc
Q 012210 396 PILAIAGDQDLICPPEAVEETVKLLPED--LVTYKVFGEPSGPHYAH-YDLVGGRMAV-EQVYPCIVQFLGRYD 465 (468)
Q Consensus 396 PvLiI~G~~D~ivp~~~~~~l~~~ip~~--~~~~~v~~~~~agH~~H-~e~~~~~~~p-e~v~~~I~~FL~~~~ 465 (468)
|+|+++|++|.+++ .++.+++.++++ .++++++ ++++|..+ ... ...... +++.+.|.+||+++.
T Consensus 290 P~Lii~G~~D~~~~--~~~~~~~~l~~~g~~~~l~~~--~g~~H~~~~~~~-~~~~~~~~~~~~~i~~fl~~~~ 358 (361)
T 1jkm_A 290 PFVVAVNELDPLRD--EGIAFARRLARAGVDVAARVN--IGLVHGADVIFR-HWLPAALESTVRDVAGFAADRA 358 (361)
T ss_dssp CEEEEEETTCTTHH--HHHHHHHHHHHTTCCEEEEEE--TTCCTTHHHHSG-GGCHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEcCcCcchh--hHHHHHHHHHHcCCCEEEEEe--CCCccCcccccc-ccccHHHHHHHHHHHHHHHHhh
Confidence 99999999999987 556666665432 5578887 89999877 310 000244 888999999998763
|
| >3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=3.3e-13 Score=137.81 Aligned_cols=65 Identities=15% Similarity=0.157 Sum_probs=52.0
Q ss_pred ccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 389 HIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 389 ~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
.+.+|+||+++++|..|.+.+++. +.+...+ .+.+.++ +++||+.++| +|+.+.+.|.+||++..
T Consensus 333 ~l~~i~vPt~v~~~~~D~~~~p~~---~~~~~~~-~~~~~~~--~~gGHf~~lE------~Pe~~~~~l~~fl~~~~ 397 (408)
T 3g02_A 333 KELYIHKPFGFSFFPKDLVPVPRS---WIATTGN-LVFFRDH--AEGGHFAALE------RPRELKTDLTAFVEQVW 397 (408)
T ss_dssp TTTCEEEEEEEEECTBSSSCCCHH---HHGGGEE-EEEEEEC--SSCBSCHHHH------CHHHHHHHHHHHHHHHC
T ss_pred cCCCcCCCEEEEeCCcccccCcHH---HHHhcCC-eeEEEEC--CCCcCchhhh------CHHHHHHHHHHHHHHHH
Confidence 467899999999999998777663 3333333 3567777 8999999998 99999999999998653
|
| >3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.41 E-value=9.9e-12 Score=122.41 Aligned_cols=209 Identities=14% Similarity=0.090 Sum_probs=125.0
Q ss_pred ccccchhhHHHHHHhhhh-cCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhc---C
Q 012210 165 AIAIQIRDLSQNLVNMIE-EGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQS---K 240 (468)
Q Consensus 165 G~~~~i~~~a~~la~~l~-~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~---~ 240 (468)
|-......+++.|+ . .||.|+++|..+..+ +.+.... +|+.++++++..+. +
T Consensus 101 g~~~~~~~~~~~la---~~~g~~V~~~dyr~~p~--------------------~~~~~~~-~D~~~a~~~l~~~~~~~~ 156 (326)
T 3ga7_A 101 GNLDTHDRIMRLLA---RYTGCTVIGIDYSLSPQ--------------------ARYPQAI-EETVAVCSYFSQHADEYS 156 (326)
T ss_dssp CCTTTTHHHHHHHH---HHHCSEEEEECCCCTTT--------------------SCTTHHH-HHHHHHHHHHHHTTTTTT
T ss_pred CChhhhHHHHHHHH---HHcCCEEEEeeCCCCCC--------------------CCCCcHH-HHHHHHHHHHHHhHHHhC
Confidence 44455667788887 6 799999998865422 1233444 89999999998764 3
Q ss_pred CCCCcEEEEEEehhHHHHHHHHHhcCCCCCcc------cccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchH
Q 012210 241 PKDGKLLAIGHSMGGILLYAMLSRCGFEGRES------RLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLG 314 (468)
Q Consensus 241 ~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~------~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (468)
.+.++++++|||+||.+++.++.++ ++ .++++|++.+..+........ .. ..
T Consensus 157 ~d~~ri~l~G~S~GG~la~~~a~~~-----~~~~~~~~~~~~~vl~~~~~~~~~~~~~~-~~----------~~------ 214 (326)
T 3ga7_A 157 LNVEKIGFAGDSAGAMLALASALWL-----RDKHIRCGNVIAILLWYGLYGLQDSVSRR-LF----------GG------ 214 (326)
T ss_dssp CCCSEEEEEEETHHHHHHHHHHHHH-----HHHTCCSSEEEEEEEESCCCSCSCCHHHH-HC----------CC------
T ss_pred CChhheEEEEeCHHHHHHHHHHHHH-----HhcCCCccCceEEEEeccccccCCChhHh-hh----------cC------
Confidence 4446999999999999999999876 43 388888888765543321100 00 00
Q ss_pred hHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCc-cccccccCcc
Q 012210 315 ALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGK-FFYKDHIHKC 393 (468)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~I 393 (468)
.. .......+..+. ..+........... ......+.+.
T Consensus 215 -----~~--------------------~~l~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (326)
T 3ga7_A 215 -----AW--------------------DGLTREDLDMYE----------------KAYLRNDEDRESPWYCLFNNDLTRD 253 (326)
T ss_dssp -----TT--------------------TTCCHHHHHHHH----------------HHHCSSGGGGGCTTTSGGGSCCSSC
T ss_pred -----CC--------------------CCCCHHHHHHHH----------------HHhCCCCCccCCcccCCCcchhhcC
Confidence 00 000111111111 11100000000000 0012345556
Q ss_pred CccEEEEecCCCCcCCHHHHHHHHHhCCC--CceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 394 NIPILAIAGDQDLICPPEAVEETVKLLPE--DLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 394 ~vPvLiI~G~~D~ivp~~~~~~l~~~ip~--~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
.+|+|+++|+.|.+++ .+..+++.+.. ..++++++ ++++|..+... ...+..+++.+.+.+||+++.
T Consensus 254 ~~P~li~~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~--~g~~H~f~~~~-~~~~~~~~~~~~~~~fl~~~l 322 (326)
T 3ga7_A 254 VPPCFIASAEFDPLID--DSRLLHQTLQAHQQPCEYKMY--PGTLHAFLHYS-RMMTIADDALQDGARFFMARM 322 (326)
T ss_dssp CCCEEEEEETTCTTHH--HHHHHHHHHHHTTCCEEEEEE--TTCCTTGGGGT-TTCHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCcCcCHH--HHHHHHHHHHHCCCcEEEEEe--CCCccchhhhc-CccHHHHHHHHHHHHHHHHHh
Confidence 7899999999999984 45555555543 25688888 89999764320 011256889999999999874
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.40 E-value=3e-12 Score=122.00 Aligned_cols=219 Identities=16% Similarity=0.198 Sum_probs=130.3
Q ss_pred cccccccccchhhHHHHHHhhhhcCce---EeccCccccccC-CccchHHHhhcccceEee-----cCChhhHHhhhHHH
Q 012210 160 RRQSSAIAIQIRDLSQNLVNMIEEGQL---SVSPQLFDLQER-LFSTIDDFQKQLDLIVQY-----DWDFDHYLEEDVPA 230 (468)
Q Consensus 160 ~~~~~G~~~~i~~~a~~la~~l~~Gy~---viapdl~~~~~~-~~~~~~~l~~~~~~~~~~-----D~~~~~~~~~D~~a 230 (468)
.|++.|-...+..+++.|+ .+|+. +++.++...+.. +.+.... .....+... .+++.+++ +|+.+
T Consensus 9 lHG~~~~~~~~~~l~~~L~---~~~~~~~~~~~~~v~~~G~~~~~G~~~~--~~~~~~~~~~~~~~~~~~~~~a-~~l~~ 82 (254)
T 3ds8_A 9 IHGSGGNASSLDKMADQLM---NEYRSSNEALTMTVNSEGKIKFEGKLTK--DAKRPIIKFGFEQNQATPDDWS-KWLKI 82 (254)
T ss_dssp ECCTTCCTTTTHHHHHHHH---HTTCCCCCEEEEEEETTTEEEEESCCCT--TCSSCEEEEEESSTTSCHHHHH-HHHHH
T ss_pred ECCCCCCcchHHHHHHHHH---HhcCCCceEEEEEEcCCCeEEEEEEecc--CCCCCEEEEEecCCCCCHHHHH-HHHHH
Confidence 3555555666778888888 77653 344333322210 0000000 011111111 13567776 99999
Q ss_pred HHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCC
Q 012210 231 AMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPV 310 (468)
Q Consensus 231 ~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (468)
+++.+..+.+.. ++++|||||||.+++.++.+++.....++|+++|+++++......... .
T Consensus 83 ~i~~l~~~~~~~--~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~---~-------------- 143 (254)
T 3ds8_A 83 AMEDLKSRYGFT--QMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPNDN---G-------------- 143 (254)
T ss_dssp HHHHHHHHHCCS--EEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCHHHH---C--------------
T ss_pred HHHHHHHHhCCC--ceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCccccccc---c--------------
Confidence 999999988776 999999999999999999998322122389999999997764432100 0
Q ss_pred cchHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCcccccccc
Q 012210 311 VPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHI 390 (468)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 390 (468)
..+. . ...... ...+..+... ...+
T Consensus 144 ----------~~~~---------------~--------------~~~p~~-~~~~~~~~~~---------------~~~~ 168 (254)
T 3ds8_A 144 ----------MDLS---------------F--------------KKLPNS-TPQMDYFIKN---------------QTEV 168 (254)
T ss_dssp ----------SCTT---------------C--------------SSCSSC-CHHHHHHHHT---------------GGGS
T ss_pred ----------cccc---------------c--------------ccCCcc-hHHHHHHHHH---------------HhhC
Confidence 0000 0 000000 0111111110 1223
Q ss_pred CccCccEEEEecC------CCCcCCHHHHHHHHHhCCCCceeE--EEecCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 012210 391 HKCNIPILAIAGD------QDLICPPEAVEETVKLLPEDLVTY--KVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 462 (468)
Q Consensus 391 ~~I~vPvLiI~G~------~D~ivp~~~~~~l~~~ip~~~~~~--~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~ 462 (468)
.+ ++|+|.|+|+ .|.+||...++.+...+++....+ +.+..+++.|..+.+ .+ ++.+.|..||+
T Consensus 169 ~~-~~~vl~I~G~~~~~~~~Dg~Vp~~ss~~l~~~~~~~~~~~~~~~~~g~~a~Hs~l~~------~~-~v~~~i~~fL~ 240 (254)
T 3ds8_A 169 SP-DLEVLAIAGELSEDNPTDGIVPTISSLATRLFMPGSAKAYIEDIQVGEDAVHQTLHE------TP-KSIEKTYWFLE 240 (254)
T ss_dssp CT-TCEEEEEEEESBTTBCBCSSSBHHHHTGGGGTSBTTBSEEEEEEEESGGGCGGGGGG------SH-HHHHHHHHHHH
T ss_pred CC-CcEEEEEEecCCCCCCCCcEeeHHHHHHHHHHhhccCcceEEEEEeCCCCchhcccC------CH-HHHHHHHHHHH
Confidence 33 7999999999 999999999999999988743333 333223356776665 44 59999999999
Q ss_pred hccC
Q 012210 463 RYDS 466 (468)
Q Consensus 463 ~~~~ 466 (468)
+..+
T Consensus 241 ~~~~ 244 (254)
T 3ds8_A 241 KFKT 244 (254)
T ss_dssp TCCC
T ss_pred HhcC
Confidence 8753
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=8.5e-12 Score=136.06 Aligned_cols=201 Identities=15% Similarity=0.173 Sum_probs=128.1
Q ss_pred HHHHHhhhh-cCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEe
Q 012210 174 SQNLVNMIE-EGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHS 252 (468)
Q Consensus 174 a~~la~~l~-~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS 252 (468)
...|+ . +||.|+++|+.|+++. ...+...+.. .+. ... .+|+.+++++|..+...+.++++++|||
T Consensus 488 ~~~l~---~~~G~~v~~~d~rG~g~~----g~~~~~~~~~----~~~-~~~-~~D~~~~~~~l~~~~~~~~~~i~i~G~S 554 (710)
T 2xdw_A 488 RLIFV---RHMGGVLAVANIRGGGEY----GETWHKGGIL----ANK-QNC-FDDFQCAAEYLIKEGYTSPKRLTINGGS 554 (710)
T ss_dssp HHHHH---HHHCCEEEEECCTTSSTT----HHHHHHTTSG----GGT-HHH-HHHHHHHHHHHHHTTSCCGGGEEEEEET
T ss_pred HHHHH---HhCCcEEEEEccCCCCCC----ChHHHHhhhh----hcC-Cch-HHHHHHHHHHHHHcCCCCcceEEEEEEC
Confidence 34455 7 9999999999987652 1222222111 111 122 3899999999987744444689999999
Q ss_pred hhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCchhHHH
Q 012210 253 MGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFS 332 (468)
Q Consensus 253 ~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (468)
+||.+++.++.++ |++++++|+.+|..+...... . ..+. .
T Consensus 555 ~GG~la~~~a~~~-----p~~~~~~v~~~~~~d~~~~~~----------------~---~~~~----------------~ 594 (710)
T 2xdw_A 555 NGGLLVATCANQR-----PDLFGCVIAQVGVMDMLKFHK----------------Y---TIGH----------------A 594 (710)
T ss_dssp HHHHHHHHHHHHC-----GGGCSEEEEESCCCCTTTGGG----------------S---TTGG----------------G
T ss_pred HHHHHHHHHHHhC-----ccceeEEEEcCCcccHhhccc----------------c---CCCh----------------h
Confidence 9999999999987 889999999988765432100 0 0000 0
Q ss_pred HHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccC-----ccCc-cEEEEecCCCC
Q 012210 333 WLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIH-----KCNI-PILAIAGDQDL 406 (468)
Q Consensus 333 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~I~v-PvLiI~G~~D~ 406 (468)
|...+ ..+ .+++... .+. .+. ....+. ++++ |+|+++|++|.
T Consensus 595 ~~~~~-g~~--~~~~~~~----------------~~~-~~s------------p~~~~~~~~~~~~~~pP~Li~~G~~D~ 642 (710)
T 2xdw_A 595 WTTDY-GCS--DSKQHFE----------------WLI-KYS------------PLHNVKLPEADDIQYPSMLLLTADHDD 642 (710)
T ss_dssp GHHHH-CCT--TSHHHHH----------------HHH-HHC------------GGGCCCCCSSTTCCCCEEEEEEETTCC
T ss_pred HHHhC-CCC--CCHHHHH----------------HHH-HhC------------cHhhhcccccccCCCCcEEEEEeCCCC
Confidence 00000 000 0111111 111 110 112344 6887 99999999999
Q ss_pred cCCHHHHHHHHHhCC---------CCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 407 ICPPEAVEETVKLLP---------EDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 407 ivp~~~~~~l~~~ip---------~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
.+|+..+.++++.++ +..+.++++ ++++|..+.+ ...+.++...+.+||.++.
T Consensus 643 ~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~gH~~~~~----~~~~~~~~~~~~~fl~~~l 704 (710)
T 2xdw_A 643 RVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVD--TKAGHGAGKP----TAKVIEEVSDMFAFIARCL 704 (710)
T ss_dssp SSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEE--SSCCSSTTCC----HHHHHHHHHHHHHHHHHHH
T ss_pred ccChhHHHHHHHHHHhhhccccCCCcCEEEEEe--CCCCcCCCCC----HHHHHHHHHHHHHHHHHHc
Confidence 999999888887765 234577777 8999987753 1145678899999998874
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A | Back alignment and structure |
|---|
Probab=99.40 E-value=6.4e-13 Score=129.59 Aligned_cols=210 Identities=14% Similarity=0.102 Sum_probs=118.9
Q ss_pred ccccccccccc--cchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHH
Q 012210 157 LLERRQSSAIA--IQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEY 234 (468)
Q Consensus 157 ll~~~~~~G~~--~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~ 234 (468)
++-.+.+.|.. ..+..++..|. .+|.|+++|+.|++..- . ..+++++++ +|+.. .
T Consensus 70 lvllhG~~~~~~~~~~~~~~~~l~----~~~~v~~~d~~G~G~s~----------~-----~~~~~~~~a-~~~~~---~ 126 (300)
T 1kez_A 70 VICCAGTAAISGPHEFTRLAGALR----GIAPVRAVPQPGYEEGE----------P-----LPSSMAAVA-AVQAD---A 126 (300)
T ss_dssp EEECCCSSTTCSTTTTHHHHHHTS----SSCCBCCCCCTTSSTTC----------C-----BCSSHHHHH-HHHHH---H
T ss_pred EEEECCCcccCcHHHHHHHHHhcC----CCceEEEecCCCCCCCC----------C-----CCCCHHHHH-HHHHH---H
Confidence 34434444333 44555665554 67999999999986520 0 123566665 66553 3
Q ss_pred HHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchH
Q 012210 235 IRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLG 314 (468)
Q Consensus 235 l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (468)
+....+. ++++++||||||.+++.+|.+++. .+.+|+++|++++....... .+..+. .
T Consensus 127 l~~~~~~--~~~~LvGhS~GG~vA~~~A~~~p~--~g~~v~~lvl~~~~~~~~~~--~~~~~~----------------~ 184 (300)
T 1kez_A 127 VIRTQGD--KPFVVAGHSAGALMAYALATELLD--RGHPPRGVVLIDVYPPGHQD--AMNAWL----------------E 184 (300)
T ss_dssp HHHHCSS--CCEEEECCTHHHHHHHHHHHHTTT--TTCCCSEEECBTCCCTTTCH--HHHHHH----------------H
T ss_pred HHHhcCC--CCEEEEEECHhHHHHHHHHHHHHh--cCCCccEEEEECCCCCcchh--HHHHHH----------------H
Confidence 3333333 389999999999999999998721 12589999999876432210 000000 0
Q ss_pred hHHHHhcCCCCCchhHHHHHHHhhhccc-cCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCcc
Q 012210 315 ALLTAAYPLSSSPPYVFSWLNNLISAED-MMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKC 393 (468)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I 393 (468)
.+... ++.... ......+ ..+..+...+. . ..+.+|
T Consensus 185 ~~~~~-----------------~~~~~~~~~~~~~~-------------~~~~~~~~~~~-----------~--~~~~~i 221 (300)
T 1kez_A 185 ELTAT-----------------LFDRETVRMDDTRL-------------TALGAYDRLTG-----------Q--WRPRET 221 (300)
T ss_dssp HHHGG-----------------GCCCCSSCCCHHHH-------------HHHHHHHHHTT-----------T--CCCCCC
T ss_pred HHHHH-----------------HHhCcCCccchHHH-------------HHHHHHHHHHh-----------c--CCCCCC
Confidence 00000 000000 0000000 00111111110 0 134789
Q ss_pred CccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcc-cccccccchhhHHHHHHHHHhhccC
Q 012210 394 NIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHY-DLVGGRMAVEQVYPCIVQFLGRYDS 466 (468)
Q Consensus 394 ~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~-e~~~~~~~pe~v~~~I~~FL~~~~~ 466 (468)
++|+|+|+|+ |.++++.. ..+.+.+++ ..+++++ ++ +|+.++ + .++.+.+.|.+||.+...
T Consensus 222 ~~P~lii~G~-d~~~~~~~-~~~~~~~~~-~~~~~~i--~g-gH~~~~~e------~~~~~~~~i~~fl~~~~~ 283 (300)
T 1kez_A 222 GLPTLLVSAG-EPMGPWPD-DSWKPTWPF-EHDTVAV--PG-DHFTMVQE------HADAIARHIDAWLGGGNS 283 (300)
T ss_dssp SCCBEEEEES-SCSSCCCS-SCCSCCCSS-CCEEEEE--SS-CTTTSSSS------CSHHHHHHHHHHHTCC--
T ss_pred CCCEEEEEeC-CCCCCCcc-cchhhhcCC-CCeEEEe--cC-CChhhccc------cHHHHHHHHHHHHHhccC
Confidence 9999999995 55555544 344455553 3477777 77 899987 5 889999999999987653
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.39 E-value=6.6e-12 Score=137.68 Aligned_cols=204 Identities=16% Similarity=0.122 Sum_probs=122.3
Q ss_pred hhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEE
Q 012210 171 RDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIG 250 (468)
Q Consensus 171 ~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvG 250 (468)
......|+ .+||.|+++|+.|+++. ...+...+.. .+.. . ..+|+.+++++|..+...+.++++++|
T Consensus 507 ~~~~~~l~---~~G~~v~~~d~rG~g~~----g~~~~~~~~~----~~~~-~-~~~D~~~~~~~l~~~~~~~~~ri~i~G 573 (741)
T 1yr2_A 507 SAGFMTWI---DSGGAFALANLRGGGEY----GDAWHDAGRR----DKKQ-N-VFDDFIAAGEWLIANGVTPRHGLAIEG 573 (741)
T ss_dssp CHHHHHHH---TTTCEEEEECCTTSSTT----HHHHHHTTSG----GGTH-H-HHHHHHHHHHHHHHTTSSCTTCEEEEE
T ss_pred CHHHHHHH---HCCcEEEEEecCCCCCC----CHHHHHhhhh----hcCC-C-cHHHHHHHHHHHHHcCCCChHHEEEEE
Confidence 34445566 89999999999987652 1222222111 1111 2 238999999999887434446999999
Q ss_pred EehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCchhH
Q 012210 251 HSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYV 330 (468)
Q Consensus 251 hS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (468)
||+||.+++.++.++ |+.++++|+.+|..+...... .+.+.
T Consensus 574 ~S~GG~la~~~~~~~-----p~~~~~~v~~~~~~d~~~~~~-------------------~~~~~--------------- 614 (741)
T 1yr2_A 574 GSNGGLLIGAVTNQR-----PDLFAAASPAVGVMDMLRFDQ-------------------FTAGR--------------- 614 (741)
T ss_dssp ETHHHHHHHHHHHHC-----GGGCSEEEEESCCCCTTSGGG-------------------STTGG---------------
T ss_pred ECHHHHHHHHHHHhC-----chhheEEEecCCccccccccC-------------------CCCCc---------------
Confidence 999999999999987 889999999988765432100 00000
Q ss_pred HHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCc-cCc-cEEEEecCCCCcC
Q 012210 331 FSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHK-CNI-PILAIAGDQDLIC 408 (468)
Q Consensus 331 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-I~v-PvLiI~G~~D~iv 408 (468)
.+...+ ..+ .+++....+ ..+ .....+.+ +++ |+|+++|++|..|
T Consensus 615 -~~~~~~-g~~--~~~~~~~~~-----------------~~~------------sp~~~~~~~~~~~P~Li~~G~~D~~v 661 (741)
T 1yr2_A 615 -YWVDDY-GYP--EKEADWRVL-----------------RRY------------SPYHNVRSGVDYPAILVTTADTDDRV 661 (741)
T ss_dssp -GGHHHH-CCT--TSHHHHHHH-----------------HTT------------CGGGCCCTTSCCCEEEEEECSCCSSS
T ss_pred -hhHHHc-CCC--CCHHHHHHH-----------------HHc------------CchhhhhccCCCCCEEEEeeCCCCCC
Confidence 000000 000 011111110 000 01234555 785 9999999999999
Q ss_pred CHHHHHHHHHhCCC-----CceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 409 PPEAVEETVKLLPE-----DLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 409 p~~~~~~l~~~ip~-----~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
|+..+.++++.++. ..+.++++ ++++|..+.+. ..+.++...+.+||.++.
T Consensus 662 ~~~~~~~~~~~l~~~~~~g~~~~l~~~--~~~gH~~~~~~----~~~~~~~~~~~~fl~~~l 717 (741)
T 1yr2_A 662 VPGHSFKYTAALQTAAIGPKPHLIRIE--TRAGHGSGKPI----DKQIEETADVQAFLAHFT 717 (741)
T ss_dssp CTHHHHHHHHHHHHSCCCSSCEEEEEC-----------CH----HHHHHHHHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHhhhhcCCCCEEEEEe--CCCCcCCCCCH----HHHHHHHHHHHHHHHHHc
Confidence 99999998887764 23566776 89999876531 134578899999998774
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=5.1e-12 Score=137.61 Aligned_cols=210 Identities=15% Similarity=0.143 Sum_probs=127.2
Q ss_pred ccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcE
Q 012210 167 AIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKL 246 (468)
Q Consensus 167 ~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v 246 (468)
.......+..|+ ..||.|+++|+.|.++.. ..+...+.. .+.. .. .+|+.+++++|..+...+.+++
T Consensus 469 ~~~~~~~~~~l~---~~G~~v~~~d~RG~g~~g----~~~~~~~~~----~~~~-~~-~~D~~~~~~~l~~~~~~d~~ri 535 (693)
T 3iuj_A 469 TPSFSVSVANWL---DLGGVYAVANLRGGGEYG----QAWHLAGTQ----QNKQ-NV-FDDFIAAAEYLKAEGYTRTDRL 535 (693)
T ss_dssp CCCCCHHHHHHH---HTTCEEEEECCTTSSTTC----HHHHHTTSG----GGTH-HH-HHHHHHHHHHHHHTTSCCGGGE
T ss_pred CCccCHHHHHHH---HCCCEEEEEeCCCCCccC----HHHHHhhhh----hcCC-Cc-HHHHHHHHHHHHHcCCCCcceE
Confidence 344455556677 899999999999876521 222222211 1111 22 3899999999988754444699
Q ss_pred EEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCC
Q 012210 247 LAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSS 326 (468)
Q Consensus 247 ~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (468)
+++|||+||.+++.++.++ |+.++++|+.+|..+...... ...+.
T Consensus 536 ~i~G~S~GG~la~~~~~~~-----p~~~~a~v~~~~~~d~~~~~~-------------------~~~~~----------- 580 (693)
T 3iuj_A 536 AIRGGSNGGLLVGAVMTQR-----PDLMRVALPAVGVLDMLRYHT-------------------FTAGT----------- 580 (693)
T ss_dssp EEEEETHHHHHHHHHHHHC-----TTSCSEEEEESCCCCTTTGGG-------------------SGGGG-----------
T ss_pred EEEEECHHHHHHHHHHhhC-----ccceeEEEecCCcchhhhhcc-------------------CCCch-----------
Confidence 9999999999999999987 889999999988766432110 00000
Q ss_pred chhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCc-cCcc-EEEEecCC
Q 012210 327 PPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHK-CNIP-ILAIAGDQ 404 (468)
Q Consensus 327 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-I~vP-vLiI~G~~ 404 (468)
.|...+ +.+ .+++. .+ .+...+. ....+.+ +++| +|+++|++
T Consensus 581 -----~~~~~~-g~p--~~~~~---------------~~-~~~~~~s------------p~~~~~~~~~~Pp~Li~~G~~ 624 (693)
T 3iuj_A 581 -----GWAYDY-GTS--ADSEA---------------MF-DYLKGYS------------PLHNVRPGVSYPSTMVTTADH 624 (693)
T ss_dssp -----GCHHHH-CCT--TSCHH---------------HH-HHHHHHC------------HHHHCCTTCCCCEEEEEEESS
T ss_pred -----hHHHHc-CCc--cCHHH---------------HH-HHHHhcC------------HHHhhcccCCCCceeEEecCC
Confidence 000000 000 01111 00 0111100 1134566 7898 99999999
Q ss_pred CCcCCHHHHHHHHHhCCC-----CceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccC
Q 012210 405 DLICPPEAVEETVKLLPE-----DLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 466 (468)
Q Consensus 405 D~ivp~~~~~~l~~~ip~-----~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~ 466 (468)
|..||+..+.++++.++. ..+.++++ ++++|....+ ...+.+....+.+||.++..
T Consensus 625 D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~gH~~~~~----~~~~~~~~~~~~~fl~~~l~ 685 (693)
T 3iuj_A 625 DDRVVPAHSFKFAATLQADNAGPHPQLIRIE--TNAGHGAGTP----VAKLIEQSADIYAFTLYEMG 685 (693)
T ss_dssp CSSSCTHHHHHHHHHHHHHCCSSSCEEEEEE--C-------CH----HHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCChhHHHHHHHHHHhhCCCCCCEEEEEe--CCCCCCCccc----HHHHHHHHHHHHHHHHHHcC
Confidence 999999999888877754 24577777 8899987642 12566788899999988753
|
| >3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A | Back alignment and structure |
|---|
Probab=99.38 E-value=2.3e-11 Score=120.00 Aligned_cols=212 Identities=13% Similarity=-0.002 Sum_probs=123.0
Q ss_pred ccccccchhhHHHHHHhhhhc-CceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCC
Q 012210 163 SSAIAIQIRDLSQNLVNMIEE-GQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKP 241 (468)
Q Consensus 163 ~~G~~~~i~~~a~~la~~l~~-Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~ 241 (468)
..|-......+++.|+ .+ ||.|+++|+.+++.. .+.... +|+.++++++......
T Consensus 102 ~~g~~~~~~~~~~~La---~~~g~~Vv~~Dyrg~~~~--------------------~~p~~~-~d~~~~~~~l~~~~~~ 157 (323)
T 3ain_A 102 VLGDIESYDPLCRAIT---NSCQCVTISVDYRLAPEN--------------------KFPAAV-VDSFDALKWVYNNSEK 157 (323)
T ss_dssp TSCCTTTTHHHHHHHH---HHHTSEEEEECCCCTTTS--------------------CTTHHH-HHHHHHHHHHHHTGGG
T ss_pred ccCChHHHHHHHHHHH---HhcCCEEEEecCCCCCCC--------------------CCcchH-HHHHHHHHHHHHhHHH
Confidence 3345566677888887 54 999999999876431 122333 8888999998776411
Q ss_pred --CCCcEEEEEEehhHHHHHHHHHhcCCCCCcccc---cceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhH
Q 012210 242 --KDGKLLAIGHSMGGILLYAMLSRCGFEGRESRL---AAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAL 316 (468)
Q Consensus 242 --~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V---~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
+..+++++||||||.+++.+|.++ ++++ +++|+++|..+............
T Consensus 158 lgd~~~i~l~G~S~GG~lA~~~a~~~-----~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~------------------- 213 (323)
T 3ain_A 158 FNGKYGIAVGGDSAGGNLAAVTAILS-----KKENIKLKYQVLIYPAVSFDLITKSLYDNG------------------- 213 (323)
T ss_dssp GTCTTCEEEEEETHHHHHHHHHHHHH-----HHTTCCCSEEEEESCCCSCCSCCHHHHHHS-------------------
T ss_pred hCCCceEEEEecCchHHHHHHHHHHh-----hhcCCCceeEEEEeccccCCCCCccHHHhc-------------------
Confidence 335899999999999999999986 5554 88899888765432211110000
Q ss_pred HHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCcc
Q 012210 317 LTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIP 396 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP 396 (468)
.........+..+......... . .....+ . .....+..+ .|
T Consensus 214 -----------------------~~~~l~~~~~~~~~~~~~~~~~-~--------~~~~~~----s--p~~~~l~~l-~P 254 (323)
T 3ain_A 214 -----------------------EGFFLTREHIDWFGQQYLRSFA-D--------LLDFRF----S--PILADLNDL-PP 254 (323)
T ss_dssp -----------------------SSSSSCHHHHHHHHHHHCSSGG-G--------GGCTTT----C--GGGSCCTTC-CC
T ss_pred -----------------------cCCCCCHHHHHHHHHHhCCCCc-c--------cCCccc----C--cccCcccCC-CH
Confidence 0000011111111000000000 0 000000 0 001123333 39
Q ss_pred EEEEecCCCCcCCHHHHHHHHHhCCC--CceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccC
Q 012210 397 ILAIAGDQDLICPPEAVEETVKLLPE--DLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 466 (468)
Q Consensus 397 vLiI~G~~D~ivp~~~~~~l~~~ip~--~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~ 466 (468)
+|+++|+.|.+++ .+..+.+.++. ..++++++ ++++|..+...- ..+.++++.+.|.+||+++..
T Consensus 255 ~lii~G~~D~l~~--~~~~~a~~l~~ag~~~~~~~~--~g~~H~~~~~~~-~~~~~~~~~~~i~~fl~~~l~ 321 (323)
T 3ain_A 255 ALIITAEHDPLRD--QGEAYANKLLQSGVQVTSVGF--NNVIHGFVSFFP-FIEQGRDAIGLIGYVLRKVFY 321 (323)
T ss_dssp EEEEEETTCTTHH--HHHHHHHHHHHTTCCEEEEEE--TTCCTTGGGGTT-TCHHHHHHHHHHHHHHHHHHH
T ss_pred HHEEECCCCccHH--HHHHHHHHHHHcCCCEEEEEE--CCCccccccccC-cCHHHHHHHHHHHHHHHHHhc
Confidence 9999999999983 44445554432 24578888 899998765210 012568899999999988654
|
| >1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A | Back alignment and structure |
|---|
Probab=99.38 E-value=1.9e-11 Score=120.15 Aligned_cols=94 Identities=19% Similarity=0.142 Sum_probs=69.0
Q ss_pred ccccchhhHHHHHHhhhh-cCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhh---cC
Q 012210 165 AIAIQIRDLSQNLVNMIE-EGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQ---SK 240 (468)
Q Consensus 165 G~~~~i~~~a~~la~~l~-~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~---~~ 240 (468)
|-......++..|+ . .||.|+++|+.+++.. .+.... +|+.++++++... .+
T Consensus 93 g~~~~~~~~~~~la---~~~G~~Vv~~d~rg~~~~--------------------~~~~~~-~d~~~~~~~l~~~~~~~~ 148 (323)
T 1lzl_A 93 GTAESSDPFCVEVA---RELGFAVANVEYRLAPET--------------------TFPGPV-NDCYAALLYIHAHAEELG 148 (323)
T ss_dssp CCGGGGHHHHHHHH---HHHCCEEEEECCCCTTTS--------------------CTTHHH-HHHHHHHHHHHHTHHHHT
T ss_pred CChhhhHHHHHHHH---HhcCcEEEEecCCCCCCC--------------------CCCchH-HHHHHHHHHHHhhHHHcC
Confidence 44555667777777 6 4999999999887541 122333 7888888888763 23
Q ss_pred CCCCcEEEEEEehhHHHHHHHHHhcCCCCCcc----cccceeEEccccccC
Q 012210 241 PKDGKLLAIGHSMGGILLYAMLSRCGFEGRES----RLAAIVTLASSLDYT 287 (468)
Q Consensus 241 ~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~----~V~~lVllap~~~~~ 287 (468)
.+..+++++||||||.+++.++.++ ++ .++++|+++|..+..
T Consensus 149 ~d~~~i~l~G~S~GG~la~~~a~~~-----~~~~~~~~~~~vl~~p~~~~~ 194 (323)
T 1lzl_A 149 IDPSRIAVGGQSAGGGLAAGTVLKA-----RDEGVVPVAFQFLEIPELDDR 194 (323)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHHH-----HHHCSSCCCEEEEESCCCCTT
T ss_pred CChhheEEEecCchHHHHHHHHHHH-----hhcCCCCeeEEEEECCccCCC
Confidence 3234899999999999999999876 43 499999999876543
|
| >3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=1.3e-12 Score=131.97 Aligned_cols=120 Identities=16% Similarity=0.166 Sum_probs=79.3
Q ss_pred ccccccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHH--Hhh-cccceEe-------ecC----
Q 012210 153 KLSSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDD--FQK-QLDLIVQ-------YDW---- 218 (468)
Q Consensus 153 ~~~~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~--l~~-~~~~~~~-------~D~---- 218 (468)
+.+.++-.|+..|....+..+++.|+ .+||.|+++|.++++.......+. ... .+..... .++
T Consensus 97 ~~P~Vv~~HG~~~~~~~~~~~a~~La---~~Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 173 (383)
T 3d59_A 97 KYPLVVFSHGLGAFRTLYSAIGIDLA---SHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYLRTLKQEEETHIRN 173 (383)
T ss_dssp CEEEEEEECCTTCCTTTTHHHHHHHH---HTTCEEEEECCCSSCSSEEEECSSHHHHHHTCCEEEECCCCCHHHHHHHHH
T ss_pred CCCEEEEcCCCCCCchHHHHHHHHHH---hCceEEEEeccCCCCccceeecCCccccccCCceeeeccccCcccchhhhH
Confidence 44557777777777888899999999 999999999999875532100000 000 0000000 000
Q ss_pred -ChhhHHhhhHHHHHHHHHhh--------------------cCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccce
Q 012210 219 -DFDHYLEEDVPAAMEYIRAQ--------------------SKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAI 277 (468)
Q Consensus 219 -~~~~~~~~D~~a~i~~l~~~--------------------~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~l 277 (468)
.+.... +|+.++++++... ...+.++++++||||||.+++.++.. +++|+++
T Consensus 174 ~~~~~~~-~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~------~~~v~a~ 246 (383)
T 3d59_A 174 EQVRQRA-KECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSE------DQRFRCG 246 (383)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHHHH------CTTCCEE
T ss_pred HHHHHHH-HHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHHhh------CCCccEE
Confidence 122233 7899999998752 11223489999999999999999887 5679999
Q ss_pred eEEcc
Q 012210 278 VTLAS 282 (468)
Q Consensus 278 Vllap 282 (468)
|++++
T Consensus 247 v~~~~ 251 (383)
T 3d59_A 247 IALDA 251 (383)
T ss_dssp EEESC
T ss_pred EEeCC
Confidence 99876
|
| >1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.37 E-value=1.4e-11 Score=135.32 Aligned_cols=232 Identities=16% Similarity=0.125 Sum_probs=128.0
Q ss_pred HHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhc-------------
Q 012210 173 LSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQS------------- 239 (468)
Q Consensus 173 ~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~------------- 239 (468)
+++.++ .+||.|+++|..|+++.- |.. ..+.. ... +|+.++++++..+.
T Consensus 273 ~~~~la---~~GYaVv~~D~RG~G~S~----------G~~---~~~~~-~e~-~D~~a~IdwL~~~~~~~~d~~~~~~v~ 334 (763)
T 1lns_A 273 LNDYFL---TRGFASIYVAGVGTRSSD----------GFQ---TSGDY-QQI-YSMTAVIDWLNGRARAYTSRKKTHEIK 334 (763)
T ss_dssp HHHHHH---TTTCEEEEECCTTSTTSC----------SCC---CTTSH-HHH-HHHHHHHHHHTTSSCEESSTTCCCEEC
T ss_pred hHHHHH---HCCCEEEEECCCcCCCCC----------CcC---CCCCH-HHH-HHHHHHHHHHhhccccccccccccccc
Confidence 457788 999999999999987631 111 01122 333 99999999998531
Q ss_pred -CCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHH
Q 012210 240 -KPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLT 318 (468)
Q Consensus 240 -~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (468)
+...++|+++||||||.+++.+|+.+ |+.++++|..++..+... ............+.+......+..
T Consensus 335 q~~~~grVgl~G~SyGG~ial~~Aa~~-----p~~lkaiV~~~~~~d~~~------~~~~~g~~~~~~g~~~~~~~~l~~ 403 (763)
T 1lns_A 335 ASWANGKVAMTGKSYLGTMAYGAATTG-----VEGLELILAEAGISSWYN------YYRENGLVRSPGGFPGEDLDVLAA 403 (763)
T ss_dssp CTTEEEEEEEEEETHHHHHHHHHHTTT-----CTTEEEEEEESCCSBHHH------HHBSSSSBCCCTTCTTCCHHHHHH
T ss_pred ccCCCCcEEEEEECHHHHHHHHHHHhC-----CcccEEEEEecccccHHH------HhhhcchhhhcccCCchhhhHHhH
Confidence 12235899999999999999999886 788999999987653211 000000000000000000000000
Q ss_pred HhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHH--hcCcccccCCccccccccCccCcc
Q 012210 319 AAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAF--REGGLRDRGGKFFYKDHIHKCNIP 396 (468)
Q Consensus 319 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~I~vP 396 (468)
..+. .. .......... .. ....+..+.... .......+.....+...+.+|++|
T Consensus 404 ~~~~-------------~~------~~~g~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~w~~~s~~~~l~~I~~P 459 (763)
T 1lns_A 404 LTYS-------------RN------LDGADFLKGN-AE----YEKRLAEMTAALDRKSGDYNQFWHDRNYLINTDKVKAD 459 (763)
T ss_dssp HHCG-------------GG------GSHHHHHHHH-HH----HHHHHHHHHHHHCTTTCCCCHHHHTTBGGGGGGGCCSE
T ss_pred HHHh-------------hh------cCcchhhhHH-HH----HHHHHHHHHhhhhhccCchhHHhhccChhhHhhcCCCC
Confidence 0000 00 0000000000 00 000000111000 000000000011234678899999
Q ss_pred EEEEecCCCCcCCHHHHHHHHHhCCC-CceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 397 ILAIAGDQDLICPPEAVEETVKLLPE-DLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 397 vLiI~G~~D~ivp~~~~~~l~~~ip~-~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
+|+|+|..|.++|+..+.++++.+++ ..+.++ + ++++|..+.+. .+..+.+.+.+||+++.
T Consensus 460 vLii~G~~D~~vp~~~a~~l~~al~~~~~~~l~-i--~~~gH~~~~~~-----~~~~~~~~i~~Ffd~~L 521 (763)
T 1lns_A 460 VLIVHGLQDWNVTPEQAYNFWKALPEGHAKHAF-L--HRGAHIYMNSW-----QSIDFSETINAYFVAKL 521 (763)
T ss_dssp EEEEEETTCCSSCTHHHHHHHHHSCTTCCEEEE-E--ESCSSCCCTTB-----SSCCHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCChHHHHHHHHhhccCCCeEEE-E--eCCcccCcccc-----chHHHHHHHHHHHHHHh
Confidence 99999999999999999999999985 233444 3 46778765441 34567888999998774
|
| >3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A | Back alignment and structure |
|---|
Probab=99.37 E-value=1.8e-11 Score=120.70 Aligned_cols=211 Identities=16% Similarity=0.087 Sum_probs=120.9
Q ss_pred cccchhhHHHHHHhhhh-cCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCC
Q 012210 166 IAIQIRDLSQNLVNMIE-EGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDG 244 (468)
Q Consensus 166 ~~~~i~~~a~~la~~l~-~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~ 244 (468)
-......++..|+ . .||.|+++|.....+ ..+.... +|+.++++++..+ +.+..
T Consensus 95 ~~~~~~~~~~~la---~~~g~~vv~~dyr~~p~--------------------~~~~~~~-~D~~~a~~~l~~~-~~d~~ 149 (322)
T 3fak_A 95 SINTHRSMVGEIS---RASQAAALLLDYRLAPE--------------------HPFPAAV-EDGVAAYRWLLDQ-GFKPQ 149 (322)
T ss_dssp CHHHHHHHHHHHH---HHHTSEEEEECCCCTTT--------------------SCTTHHH-HHHHHHHHHHHHH-TCCGG
T ss_pred ChHHHHHHHHHHH---HhcCCEEEEEeCCCCCC--------------------CCCCcHH-HHHHHHHHHHHHc-CCCCc
Confidence 3344455667776 5 599999988865321 1233444 8999999999887 44446
Q ss_pred cEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCC
Q 012210 245 KLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLS 324 (468)
Q Consensus 245 ~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (468)
+++++|||+||.+++.++.+++... .+.++++|+++|..+............. ..+..
T Consensus 150 ri~l~G~S~GG~lA~~~a~~~~~~~-~~~~~~~vl~~p~~~~~~~~~~~~~~~~---------------------~~~~~ 207 (322)
T 3fak_A 150 HLSISGDSAGGGLVLAVLVSARDQG-LPMPASAIPISPWADMTCTNDSFKTRAE---------------------ADPMV 207 (322)
T ss_dssp GEEEEEETHHHHHHHHHHHHHHHTT-CCCCSEEEEESCCCCTTCCCTHHHHTTT---------------------TCCSC
T ss_pred eEEEEEcCcCHHHHHHHHHHHHhcC-CCCceEEEEECCEecCcCCCcCHHHhCc---------------------cCccc
Confidence 9999999999999999998761100 1239999999997765433211111000 00000
Q ss_pred CCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecCC
Q 012210 325 SSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQ 404 (468)
Q Consensus 325 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~ 404 (468)
.. .....+...+... .....+ ........+.. ..|+||++|+.
T Consensus 208 ~~-~~~~~~~~~~~~~---------------~~~~~~--------------------~~sp~~~~~~~-~pP~li~~g~~ 250 (322)
T 3fak_A 208 AP-GGINKMAARYLNG---------------ADAKHP--------------------YASPNFANLKG-LPPLLIHVGRD 250 (322)
T ss_dssp CS-SHHHHHHHHHHTT---------------SCTTCT--------------------TTCGGGSCCTT-CCCEEEEEETT
T ss_pred CH-HHHHHHHHHhcCC---------------CCCCCc--------------------ccCCCcccccC-CChHhEEEcCc
Confidence 00 0000111111000 000000 00000112222 24999999999
Q ss_pred CCcCCHHHHHHHHHhCCCC--ceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 405 DLICPPEAVEETVKLLPED--LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 405 D~ivp~~~~~~l~~~ip~~--~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
|.++ ..+..+++.+... .++++++ |+++|..+... ......+++++.+.+||+++.
T Consensus 251 D~~~--~~~~~~~~~l~~~g~~~~~~~~--~g~~H~~~~~~-~~~~~~~~~~~~i~~fl~~~l 308 (322)
T 3fak_A 251 EVLL--DDSIKLDAKAKADGVKSTLEIW--DDMIHVWHAFH-PMLPEGKQAIVRVGEFMREQW 308 (322)
T ss_dssp STTH--HHHHHHHHHHHHTTCCEEEEEE--TTCCTTGGGGT-TTCHHHHHHHHHHHHHHHHHH
T ss_pred CccH--HHHHHHHHHHHHcCCCEEEEEe--CCceeehhhcc-CCCHHHHHHHHHHHHHHHHHH
Confidence 9885 4555666555432 5577887 99999665310 011356889999999998764
|
| >4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=99.36 E-value=2.9e-12 Score=118.68 Aligned_cols=171 Identities=19% Similarity=0.214 Sum_probs=107.8
Q ss_pred chhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecC-ChhhHHhhhHHHHHHHHHhhcCCCCCcEE
Q 012210 169 QIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDW-DFDHYLEEDVPAAMEYIRAQSKPKDGKLL 247 (468)
Q Consensus 169 ~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~-~~~~~~~~D~~a~i~~l~~~~~~~~~~v~ 247 (468)
.+..+++.|. ..||.|++|+..++. |... .... . ...+. ..++.. +.+..+++.+... +.+.++++
T Consensus 37 ~~~~l~~~l~---~~~~~v~~P~~~g~~--w~~~-~~~~-~----~~~~~~~~~~~~-~~i~~~~~~~~~~-~i~~~ri~ 103 (210)
T 4h0c_A 37 DIISLQKVLK---LDEMAIYAPQATNNS--WYPY-SFMA-P----VQQNQPALDSAL-ALVGEVVAEIEAQ-GIPAEQIY 103 (210)
T ss_dssp HHHGGGGTSS---CTTEEEEEECCGGGC--SSSS-CTTS-C----GGGGTTHHHHHH-HHHHHHHHHHHHT-TCCGGGEE
T ss_pred HHHHHHHHhC---CCCeEEEeecCCCCC--cccc-ccCC-C----cccchHHHHHHH-HHHHHHHHHHHHh-CCChhhEE
Confidence 3444555555 789999999987753 2110 0000 0 00011 122222 4455555555433 44456999
Q ss_pred EEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCc
Q 012210 248 AIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSP 327 (468)
Q Consensus 248 lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (468)
++|||+||.+++.++.++ |+++.++|.+++........
T Consensus 104 l~G~S~Gg~~a~~~a~~~-----p~~~~~vv~~sg~l~~~~~~------------------------------------- 141 (210)
T 4h0c_A 104 FAGFSQGACLTLEYTTRN-----ARKYGGIIAFTGGLIGQELA------------------------------------- 141 (210)
T ss_dssp EEEETHHHHHHHHHHHHT-----BSCCSEEEEETCCCCSSSCC-------------------------------------
T ss_pred EEEcCCCcchHHHHHHhC-----cccCCEEEEecCCCCChhhh-------------------------------------
Confidence 999999999999999987 88999999987643211100
Q ss_pred hhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecCCCCc
Q 012210 328 PYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLI 407 (468)
Q Consensus 328 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~D~i 407 (468)
.. ......-++|+|++||++|.+
T Consensus 142 -----------------~~----------------------------------------~~~~~~~~~Pvl~~hG~~D~~ 164 (210)
T 4h0c_A 142 -----------------IG----------------------------------------NYKGDFKQTPVFISTGNPDPH 164 (210)
T ss_dssp -----------------GG----------------------------------------GCCBCCTTCEEEEEEEESCTT
T ss_pred -----------------hh----------------------------------------hhhhhccCCceEEEecCCCCc
Confidence 00 000011257999999999999
Q ss_pred CCHHHHHHHHHhCCC--CceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 408 CPPEAVEETVKLLPE--DLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 408 vp~~~~~~l~~~ip~--~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
+|.+.++++++.+.. ..++++++ |+.+|.... ++ .+.|.+||.+
T Consensus 165 vp~~~~~~~~~~L~~~g~~v~~~~y--pg~gH~i~~---------~e-l~~i~~wL~k 210 (210)
T 4h0c_A 165 VPVSRVQESVTILEDMNAAVSQVVY--PGRPHTISG---------DE-IQLVNNTILK 210 (210)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEEEE--ETCCSSCCH---------HH-HHHHHHTTTC
T ss_pred cCHHHHHHHHHHHHHCCCCeEEEEE--CCCCCCcCH---------HH-HHHHHHHHcC
Confidence 999998888877653 35677777 888886543 22 4678888864
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=99.36 E-value=1.8e-11 Score=132.96 Aligned_cols=201 Identities=15% Similarity=0.077 Sum_probs=129.1
Q ss_pred HHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehh
Q 012210 175 QNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMG 254 (468)
Q Consensus 175 ~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~G 254 (468)
+.|+ .+||.|+++|+.|.++.. ..+...+.. ++.. . ..+|+.+++++|..+...+.++++++|||+|
T Consensus 502 q~la---~~Gy~Vv~~d~RGsg~~G----~~~~~~~~~----~~~~-~-~~~D~~aav~~L~~~~~~d~~rI~i~G~S~G 568 (711)
T 4hvt_A 502 EVWV---KNAGVSVLANIRGGGEFG----PEWHKSAQG----IKRQ-T-AFNDFFAVSEELIKQNITSPEYLGIKGGSNG 568 (711)
T ss_dssp HHTG---GGTCEEEEECCTTSSTTC----HHHHHTTSG----GGTH-H-HHHHHHHHHHHHHHTTSCCGGGEEEEEETHH
T ss_pred HHHH---HCCCEEEEEeCCCCCCcc----hhHHHhhhh----ccCc-C-cHHHHHHHHHHHHHcCCCCcccEEEEeECHH
Confidence 4566 899999999999876532 122211111 1112 2 2389999999998875555568999999999
Q ss_pred HHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCchhHHHHH
Q 012210 255 GILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWL 334 (468)
Q Consensus 255 G~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 334 (468)
|.+++.++.++ |+.++++|..+|..+...... . ..+. .|.
T Consensus 569 G~la~~~a~~~-----pd~f~a~V~~~pv~D~~~~~~----------------~---~~~~----------------~~~ 608 (711)
T 4hvt_A 569 GLLVSVAMTQR-----PELFGAVACEVPILDMIRYKE----------------F---GAGH----------------SWV 608 (711)
T ss_dssp HHHHHHHHHHC-----GGGCSEEEEESCCCCTTTGGG----------------S---TTGG----------------GGH
T ss_pred HHHHHHHHHhC-----cCceEEEEEeCCccchhhhhc----------------c---ccch----------------HHH
Confidence 99999999886 889999999988766432100 0 0000 010
Q ss_pred HHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCc--cEEEEecCCCCcCCHHH
Q 012210 335 NNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNI--PILAIAGDQDLICPPEA 412 (468)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~v--PvLiI~G~~D~ivp~~~ 412 (468)
..+ +.+ .+++... ....+ .....+.++++ |+|+++|++|..||+..
T Consensus 609 ~~~-G~p--~~~~~~~-----------------~l~~~------------SP~~~v~~i~~~pPvLii~G~~D~~Vp~~~ 656 (711)
T 4hvt_A 609 TEY-GDP--EIPNDLL-----------------HIKKY------------APLENLSLTQKYPTVLITDSVLDQRVHPWH 656 (711)
T ss_dssp HHH-CCT--TSHHHHH-----------------HHHHH------------CGGGSCCTTSCCCEEEEEEETTCCSSCTHH
T ss_pred HHh-CCC--cCHHHHH-----------------HHHHc------------CHHHHHhhcCCCCCEEEEecCCCCcCChHH
Confidence 000 000 0111111 11111 11245667777 99999999999999999
Q ss_pred HHHHHHhC-CCC--ceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccC
Q 012210 413 VEETVKLL-PED--LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 466 (468)
Q Consensus 413 ~~~l~~~i-p~~--~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~ 466 (468)
+.++++.+ ... .+.++++ ++++|..... ..........+.+||.++..
T Consensus 657 s~~~~~aL~~~~g~pv~l~~~--p~~gHg~~~~----~~~~~~~~~~i~~FL~~~Lg 707 (711)
T 4hvt_A 657 GRIFEYVLAQNPNTKTYFLES--KDSGHGSGSD----LKESANYFINLYTFFANALK 707 (711)
T ss_dssp HHHHHHHHTTCTTCCEEEEEE--SSCCSSSCSS----HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCEEEEEE--CCCCCcCcCC----cchHHHHHHHHHHHHHHHhC
Confidence 99999888 433 4566776 8999986542 12445667788999988754
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=99.35 E-value=1.4e-11 Score=121.49 Aligned_cols=208 Identities=14% Similarity=0.120 Sum_probs=120.4
Q ss_pred ccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcE
Q 012210 167 AIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKL 246 (468)
Q Consensus 167 ~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v 246 (468)
...+..++..| ..||.|+++|+.|++..- . ...++.+++ +|+.+.++.+... +++
T Consensus 96 ~~~~~~~~~~L----~~~~~v~~~d~~G~G~~~-----------~----~~~~~~~~~-~~~~~~l~~~~~~-----~~~ 150 (319)
T 3lcr_A 96 PQVYSRLAEEL----DAGRRVSALVPPGFHGGQ-----------A----LPATLTVLV-RSLADVVQAEVAD-----GEF 150 (319)
T ss_dssp GGGGHHHHHHH----CTTSEEEEEECTTSSTTC-----------C----EESSHHHHH-HHHHHHHHHHHTT-----SCE
T ss_pred HHHHHHHHHHh----CCCceEEEeeCCCCCCCC-----------C----CCCCHHHHH-HHHHHHHHHhcCC-----CCE
Confidence 34455555555 589999999999986410 0 112566665 7777776665431 389
Q ss_pred EEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCC
Q 012210 247 LAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSS 326 (468)
Q Consensus 247 ~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (468)
+++||||||.+++.+|.+++. .+.+|+++|++++........ .. ..+...+
T Consensus 151 ~lvGhS~Gg~vA~~~A~~~~~--~~~~v~~lvl~~~~~~~~~~~-~~--------------------~~~~~~~------ 201 (319)
T 3lcr_A 151 ALAGHSSGGVVAYEVARELEA--RGLAPRGVVLIDSYSFDGDGG-RP--------------------EELFRSA------ 201 (319)
T ss_dssp EEEEETHHHHHHHHHHHHHHH--TTCCCSCEEEESCCCCCSSCC-HH--------------------HHHHHHH------
T ss_pred EEEEECHHHHHHHHHHHHHHh--cCCCccEEEEECCCCCCccch-hh--------------------HHHHHHH------
Confidence 999999999999999988621 145799999998765432210 00 0000000
Q ss_pred chhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecCCCC
Q 012210 327 PPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDL 406 (468)
Q Consensus 327 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~D~ 406 (468)
........ .. + ..+. .....+..+...+.. +. .+ ...+|++|+|+|+|++|
T Consensus 202 ---~~~~~~~~------------~~-~-~~~~-~~~~~l~~~~~~~~~--~~------~~--~~~~i~~PvLli~g~~~- 252 (319)
T 3lcr_A 202 ---LNERFVEY------------LR-L-TGGG-NLSQRITAQVWCLEL--LR------GW--RPEGLTAPTLYVRPAQP- 252 (319)
T ss_dssp ---HHHHHHHH------------HH-H-HCCC-CHHHHHHHHHHHHHH--TT------TC--CCCCCSSCEEEEEESSC-
T ss_pred ---HHHHHhhh------------hc-c-cCCC-chhHHHHHHHHHHHH--Hh------cC--CCCCcCCCEEEEEeCCC-
Confidence 00000000 00 0 0000 001111111111110 00 01 23679999999999984
Q ss_pred cCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 407 ICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 407 ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
++++.....+.+.+++ ..+++++ + ++|+.+++ ++.++++.+.|.+||.+..
T Consensus 253 ~~~~~~~~~~~~~~~~-~~~~~~~--~-g~H~~~~~----~~~~~~va~~i~~fL~~~~ 303 (319)
T 3lcr_A 253 LVEQEKPEWRGDVLAA-MGQVVEA--P-GDHFTIIE----GEHVASTAHIVGDWLREAH 303 (319)
T ss_dssp SSSCCCTHHHHHHHHT-CSEEEEE--S-SCTTGGGS----TTTHHHHHHHHHHHHHHHH
T ss_pred CCCcccchhhhhcCCC-CceEEEe--C-CCcHHhhC----cccHHHHHHHHHHHHHhcc
Confidence 5556667778888776 3466666 4 57776663 1378999999999998764
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.34 E-value=3.3e-12 Score=119.93 Aligned_cols=66 Identities=14% Similarity=0.071 Sum_probs=51.8
Q ss_pred ccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCC------ceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 012210 389 HIHKCNIPILAIAGDQDLICPPEAVEETVKLLPED------LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 462 (468)
Q Consensus 389 ~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~------~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~ 462 (468)
.+.++++|+|+++|++|.++|++.++.+++.+++. ...+ ++ ++++|..+.+ +.+.+.|.+||+
T Consensus 167 ~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~g~~~~~~~~-~~--~~~gH~~~~~--------~~~~~~i~~fl~ 235 (243)
T 1ycd_A 167 VKPDMKTKMIFIYGASDQAVPSVRSKYLYDIYLKAQNGNKEKVLA-YE--HPGGHMVPNK--------KDIIRPIVEQIT 235 (243)
T ss_dssp CCTTCCCEEEEEEETTCSSSCHHHHHHHHHHHHHHTTTCTTTEEE-EE--ESSSSSCCCC--------HHHHHHHHHHHH
T ss_pred CcccCCCCEEEEEeCCCCccCHHHHHHHHHHhhhhccccccccEE-Ee--cCCCCcCCch--------HHHHHHHHHHHH
Confidence 35668999999999999999999999998888752 2333 33 5788987653 458999999998
Q ss_pred hcc
Q 012210 463 RYD 465 (468)
Q Consensus 463 ~~~ 465 (468)
++.
T Consensus 236 ~~~ 238 (243)
T 1ycd_A 236 SSL 238 (243)
T ss_dssp HHH
T ss_pred Hhh
Confidence 764
|
| >3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=4.3e-11 Score=120.28 Aligned_cols=207 Identities=16% Similarity=0.101 Sum_probs=121.2
Q ss_pred hhhHHHHHHhhhhc-CceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhc----CCCCC
Q 012210 170 IRDLSQNLVNMIEE-GQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQS----KPKDG 244 (468)
Q Consensus 170 i~~~a~~la~~l~~-Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~----~~~~~ 244 (468)
...++++|+ .+ ||.|+++|.....+ ..+.... +|+.++++++..+. +.+.+
T Consensus 133 ~~~~~~~la---~~~g~~Vv~~dyR~~p~--------------------~~~~~~~-~D~~~a~~~l~~~~~~~~~~d~~ 188 (365)
T 3ebl_A 133 YDSLCRRFV---KLSKGVVVSVNYRRAPE--------------------HRYPCAY-DDGWTALKWVMSQPFMRSGGDAQ 188 (365)
T ss_dssp HHHHHHHHH---HHHTSEEEEECCCCTTT--------------------SCTTHHH-HHHHHHHHHHHHCTTTEETTTTE
T ss_pred HHHHHHHHH---HHCCCEEEEeeCCCCCC--------------------CCCcHHH-HHHHHHHHHHHhCchhhhCCCCC
Confidence 467788888 65 99999988764321 1233444 99999999998543 44555
Q ss_pred -cEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCC
Q 012210 245 -KLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPL 323 (468)
Q Consensus 245 -~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (468)
+++++|||+||.+++.+|.+++.. ..+++++|+++|..+............ ..
T Consensus 189 ~ri~l~G~S~GG~la~~~a~~~~~~--~~~~~g~vl~~p~~~~~~~~~~~~~~~---------~~--------------- 242 (365)
T 3ebl_A 189 ARVFLSGDSSGGNIAHHVAVRAADE--GVKVCGNILLNAMFGGTERTESERRLD---------GK--------------- 242 (365)
T ss_dssp EEEEEEEETHHHHHHHHHHHHHHHT--TCCCCEEEEESCCCCCSSCCHHHHHHT---------TT---------------
T ss_pred CcEEEEeeCccHHHHHHHHHHHHhc--CCceeeEEEEccccCCCcCChhhhhcC---------CC---------------
Confidence 899999999999999999875110 137999999998776543221110000 00
Q ss_pred CCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcc-cccC--Ccc-ccccccCccC-ccEE
Q 012210 324 SSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGL-RDRG--GKF-FYKDHIHKCN-IPIL 398 (468)
Q Consensus 324 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~-~~~~~l~~I~-vPvL 398 (468)
.......... +...+..... .... ... .....+..+. .|+|
T Consensus 243 ------------------~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~pP~L 288 (365)
T 3ebl_A 243 ------------------YFVTLQDRDW----------------YWKAYLPEDADRDHPACNPFGPNGRRLGGLPFAKSL 288 (365)
T ss_dssp ------------------SSCCHHHHHH----------------HHHHHSCTTCCTTSTTTCTTSTTCCCCTTSCCCCEE
T ss_pred ------------------cccCHHHHHH----------------HHHHhCCCCCCCCCcccCCCCCcchhhccCCCCCEE
Confidence 0000111100 0000000000 0000 000 0112333333 4899
Q ss_pred EEecCCCCcCCHHHHHHHHHhCCC--CceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccC
Q 012210 399 AIAGDQDLICPPEAVEETVKLLPE--DLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 466 (468)
Q Consensus 399 iI~G~~D~ivp~~~~~~l~~~ip~--~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~ 466 (468)
+++|+.|.+++. ...+.+.+.. ..++++++ ++++|..+.. ...+..+++++.|.+||+++..
T Consensus 289 i~~G~~D~l~~~--~~~~~~~L~~~g~~v~l~~~--~g~~H~f~~~--~~~~~~~~~~~~i~~Fl~~~~~ 352 (365)
T 3ebl_A 289 IIVSGLDLTCDR--QLAYADALREDGHHVKVVQC--ENATVGFYLL--PNTVHYHEVMEEISDFLNANLY 352 (365)
T ss_dssp EEEETTSTTHHH--HHHHHHHHHHTTCCEEEEEE--TTCCTTGGGS--SCSHHHHHHHHHHHHHHHHHCC
T ss_pred EEEcCcccchhH--HHHHHHHHHHCCCCEEEEEE--CCCcEEEecc--CCCHHHHHHHHHHHHHHHHhhh
Confidence 999999987653 3444444332 25677887 9999987742 1224678999999999998754
|
| >3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.33 E-value=9.8e-12 Score=118.72 Aligned_cols=124 Identities=11% Similarity=0.059 Sum_probs=67.9
Q ss_pred cccccccccccccccchhhH---HHHHHhhhhcCceEeccCccccccCCccchHHHhhc---ccceEeecCChh---hHH
Q 012210 154 LSSLLERRQSSAIAIQIRDL---SQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQ---LDLIVQYDWDFD---HYL 224 (468)
Q Consensus 154 ~~~ll~~~~~~G~~~~i~~~---a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~---~~~~~~~D~~~~---~~~ 224 (468)
.+.++-.++..+........ ++.++ ..||.|++||..+++.........+..+ +.......-.+. .+.
T Consensus 45 ~p~vv~lHG~~~~~~~~~~~~~~~~~~~---~~g~~vv~~d~~~rG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 121 (282)
T 3fcx_A 45 CPALYWLSGLTCTEQNFISKSGYHQSAS---EHGLVVIAPDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMY 121 (282)
T ss_dssp EEEEEEECCTTCCSHHHHHHSCCHHHHH---HHTCEEEEECSCSSCCCC--------CCCCCCTTCBCCSTTHHHHCBHH
T ss_pred CCEEEEEcCCCCCccchhhcchHHHHhh---cCCeEEEEeccccCccccccccccccccCCcccccccCcccccchhhHH
Confidence 34455544444434333333 56666 8899999999833322111111110000 000000000110 111
Q ss_pred hhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccc
Q 012210 225 EEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 225 ~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
..+...+++++....+.+.++++++||||||.+++.+|.++ |+.++++|+++|...
T Consensus 122 ~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~-----p~~~~~~v~~s~~~~ 177 (282)
T 3fcx_A 122 SYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKN-----PGKYKSVSAFAPICN 177 (282)
T ss_dssp HHHHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHHHHTS-----TTTSSCEEEESCCCC
T ss_pred HHHHHHHHHHHHHHcCCCccceEEEEECchHHHHHHHHHhC-----cccceEEEEeCCccC
Confidence 12333555556555554335899999999999999999987 888999999988654
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.32 E-value=3.5e-11 Score=132.28 Aligned_cols=208 Identities=15% Similarity=0.114 Sum_probs=126.5
Q ss_pred hhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhh-cccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEE
Q 012210 170 IRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQK-QLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLA 248 (468)
Q Consensus 170 i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~-~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~l 248 (468)
....+..|+ .+||.|+++|+.|+++.. ..+.. .+. .. ......+|+.+++++|..+...+.+++++
T Consensus 527 ~~~~~~~l~---~~G~~v~~~d~RG~g~~G----~~~~~~~~~----~~--~~~~~~~D~~~~~~~l~~~~~~d~~ri~i 593 (751)
T 2xe4_A 527 FSIQHLPYC---DRGMIFAIAHIRGGSELG----RAWYEIGAK----YL--TKRNTFSDFIAAAEFLVNAKLTTPSQLAC 593 (751)
T ss_dssp CCGGGHHHH---TTTCEEEEECCTTSCTTC----THHHHTTSS----GG--GTHHHHHHHHHHHHHHHHTTSCCGGGEEE
T ss_pred chHHHHHHH---hCCcEEEEEeeCCCCCcC----cchhhcccc----cc--ccCccHHHHHHHHHHHHHCCCCCcccEEE
Confidence 344555677 899999999999876521 11211 111 11 11123489999999998874444569999
Q ss_pred EEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCch
Q 012210 249 IGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPP 328 (468)
Q Consensus 249 vGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (468)
+|+|+||.+++.++.++ |+.++++|+.+|..+.... +. ....+..
T Consensus 594 ~G~S~GG~la~~~a~~~-----p~~~~a~v~~~~~~d~~~~------~~----------~~~~~~~-------------- 638 (751)
T 2xe4_A 594 EGRSAGGLLMGAVLNMR-----PDLFKVALAGVPFVDVMTT------MC----------DPSIPLT-------------- 638 (751)
T ss_dssp EEETHHHHHHHHHHHHC-----GGGCSEEEEESCCCCHHHH------HT----------CTTSTTH--------------
T ss_pred EEECHHHHHHHHHHHhC-----chheeEEEEeCCcchHHhh------hc----------ccCcccc--------------
Confidence 99999999999999987 8899999998886542110 00 0000000
Q ss_pred hHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCcc-EEEEecCCCCc
Q 012210 329 YVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIP-ILAIAGDQDLI 407 (468)
Q Consensus 329 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP-vLiI~G~~D~i 407 (468)
...| . ....+ .+++.+ . ....+ .....+.++++| +|+++|++|..
T Consensus 639 -~~~~-~-~~g~p--~~~~~~----------------~-~~~~~------------sp~~~~~~~~~Pp~Lii~G~~D~~ 684 (751)
T 2xe4_A 639 -TGEW-E-EWGNP--NEYKYY----------------D-YMLSY------------SPMDNVRAQEYPNIMVQCGLHDPR 684 (751)
T ss_dssp -HHHT-T-TTCCT--TSHHHH----------------H-HHHHH------------CTGGGCCSSCCCEEEEEEETTCSS
T ss_pred -hhhH-H-HcCCC--CCHHHH----------------H-HHHhc------------ChhhhhccCCCCceeEEeeCCCCC
Confidence 0000 0 00000 011111 1 11111 012346678997 99999999999
Q ss_pred CCHHHHHHHHHhCCCC-----ceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 408 CPPEAVEETVKLLPED-----LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 408 vp~~~~~~l~~~ip~~-----~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
||+..+.++++.++.. .+.+.++ ++++|....+- .........+.+||.++.
T Consensus 685 vp~~~~~~~~~~L~~~~~~~~~~~~~~~--~~~gH~~~~~~----~~~~~~~~~~~~Fl~~~l 741 (751)
T 2xe4_A 685 VAYWEPAKWVSKLRECKTDNNEILLNID--MESGHFSAKDR----YKFWKESAIQQAFVCKHL 741 (751)
T ss_dssp SCTHHHHHHHHHHHHHCCSCCCEEEEEE--TTCCSSCCSSH----HHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHhcCCCCceEEEEEC--CCCCCCCcCCh----hHHHHHHHHHHHHHHHHh
Confidence 9999998888877532 2234444 88999876530 122345567899998775
|
| >1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.29 E-value=2.4e-11 Score=118.95 Aligned_cols=95 Identities=15% Similarity=0.157 Sum_probs=68.0
Q ss_pred ccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhc---CC
Q 012210 165 AIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQS---KP 241 (468)
Q Consensus 165 G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~---~~ 241 (468)
|-......+++.|+ ...||.|+++|+.+++.. .+.... +|+.++++++.... +.
T Consensus 93 g~~~~~~~~~~~la--~~~g~~Vv~~dyrg~g~~--------------------~~p~~~-~d~~~~~~~l~~~~~~~~~ 149 (311)
T 1jji_A 93 CSIESHDALCRRIA--RLSNSTVVSVDYRLAPEH--------------------KFPAAV-YDCYDATKWVAENAEELRI 149 (311)
T ss_dssp CCTGGGHHHHHHHH--HHHTSEEEEEECCCTTTS--------------------CTTHHH-HHHHHHHHHHHHTHHHHTE
T ss_pred CChhHhHHHHHHHH--HHhCCEEEEecCCCCCCC--------------------CCCCcH-HHHHHHHHHHHhhHHHhCC
Confidence 44456677777776 136999999999887541 111222 67777777776542 33
Q ss_pred CCCcEEEEEEehhHHHHHHHHHhcCCCCCccc----ccceeEEccccccC
Q 012210 242 KDGKLLAIGHSMGGILLYAMLSRCGFEGRESR----LAAIVTLASSLDYT 287 (468)
Q Consensus 242 ~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~----V~~lVllap~~~~~ 287 (468)
+..+++++|||+||.+++.++.++ +++ ++++|+++|..+..
T Consensus 150 d~~~i~l~G~S~GG~la~~~a~~~-----~~~~~~~~~~~vl~~p~~~~~ 194 (311)
T 1jji_A 150 DPSKIFVGGDSAGGNLAAAVSIMA-----RDSGEDFIKHQILIYPVVNFV 194 (311)
T ss_dssp EEEEEEEEEETHHHHHHHHHHHHH-----HHTTCCCEEEEEEESCCCCSS
T ss_pred CchhEEEEEeCHHHHHHHHHHHHH-----HhcCCCCceEEEEeCCccCCC
Confidence 334899999999999999999886 444 99999999877654
|
| >3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.29 E-value=2.6e-11 Score=119.27 Aligned_cols=99 Identities=13% Similarity=0.019 Sum_probs=68.6
Q ss_pred ccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhh---cCC
Q 012210 165 AIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQ---SKP 241 (468)
Q Consensus 165 G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~---~~~ 241 (468)
|-......++..|+ ...||.|+++|.....+ +.+.... +|+.++++++..+ .+.
T Consensus 99 g~~~~~~~~~~~la--~~~g~~vv~~dyr~~p~--------------------~~~p~~~-~D~~~a~~~l~~~~~~~~~ 155 (317)
T 3qh4_A 99 GNLDTDHRQCLELA--RRARCAVVSVDYRLAPE--------------------HPYPAAL-HDAIEVLTWVVGNATRLGF 155 (317)
T ss_dssp CCTTTTHHHHHHHH--HHHTSEEEEECCCCTTT--------------------SCTTHHH-HHHHHHHHHHHHTHHHHTE
T ss_pred CChHHHHHHHHHHH--HHcCCEEEEecCCCCCC--------------------CCCchHH-HHHHHHHHHHHhhHHhhCC
Confidence 34445566777776 13499999988764322 1233434 8889999999875 344
Q ss_pred CCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccC
Q 012210 242 KDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYT 287 (468)
Q Consensus 242 ~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~ 287 (468)
+.++++++|||+||.+++.++.+++... .+.+.++++++|..+..
T Consensus 156 d~~ri~l~G~S~GG~lA~~~a~~~~~~~-~~~~~~~vl~~p~~~~~ 200 (317)
T 3qh4_A 156 DARRLAVAGSSAGATLAAGLAHGAADGS-LPPVIFQLLHQPVLDDR 200 (317)
T ss_dssp EEEEEEEEEETHHHHHHHHHHHHHHHTS-SCCCCEEEEESCCCCSS
T ss_pred CcceEEEEEECHHHHHHHHHHHHHHhcC-CCCeeEEEEECceecCC
Confidence 3458999999999999999998751110 23589999999877654
|
| >3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.28 E-value=1.7e-11 Score=117.08 Aligned_cols=96 Identities=18% Similarity=0.219 Sum_probs=58.6
Q ss_pred hcCceEeccCccccccCCccchHHHhh---cc-cceE-----eecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEe
Q 012210 182 EEGQLSVSPQLFDLQERLFSTIDDFQK---QL-DLIV-----QYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHS 252 (468)
Q Consensus 182 ~~Gy~viapdl~~~~~~~~~~~~~l~~---~~-~~~~-----~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS 252 (468)
..||.|++||..+++.........+.. .+ +.-. ...+.+.++..++ +++++....+.+.++++++|||
T Consensus 72 ~~g~~vv~~d~~g~G~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~d~~~i~l~G~S 148 (278)
T 3e4d_A 72 ELGLVVVCPDTSPRGNDVPDELTNWQMGKGAGFYLDATEEPWSEHYQMYSYVTEE---LPALIGQHFRADMSRQSIFGHS 148 (278)
T ss_dssp HHTCEEEECCSSCCSTTSCCCTTCTTSBTTBCTTSBCCSTTTTTTCBHHHHHHTH---HHHHHHHHSCEEEEEEEEEEET
T ss_pred hCCeEEEecCCcccCcccccccccccccCCccccccCCcCcccchhhHHHHHHHH---HHHHHHhhcCCCcCCeEEEEEC
Confidence 569999999998876542221111100 00 0000 0001122222233 4455555544422489999999
Q ss_pred hhHHHHHHHHHhcCCCCCcccccceeEEccccc
Q 012210 253 MGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 253 ~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
|||.+++.+|.++ |+.++++++++|...
T Consensus 149 ~GG~~a~~~a~~~-----p~~~~~~v~~~~~~~ 176 (278)
T 3e4d_A 149 MGGHGAMTIALKN-----PERFKSCSAFAPIVA 176 (278)
T ss_dssp HHHHHHHHHHHHC-----TTTCSCEEEESCCSC
T ss_pred hHHHHHHHHHHhC-----CcccceEEEeCCccc
Confidence 9999999999987 889999999988665
|
| >2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.27 E-value=1.7e-10 Score=110.73 Aligned_cols=224 Identities=13% Similarity=0.127 Sum_probs=123.2
Q ss_pred hhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEE
Q 012210 171 RDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIG 250 (468)
Q Consensus 171 ~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvG 250 (468)
..++..++ ..||+|+++|+.... +..+.... +|+.++++++..+... .++++++|
T Consensus 48 ~~~~~~l~---~~g~~Vi~vdYrlaP--------------------e~~~p~~~-~D~~~al~~l~~~~~~-~~~i~l~G 102 (274)
T 2qru_A 48 EELKELFT---SNGYTVLALDYLLAP--------------------NTKIDHIL-RTLTETFQLLNEEIIQ-NQSFGLCG 102 (274)
T ss_dssp HHHHHHHH---TTTEEEEEECCCCTT--------------------TSCHHHHH-HHHHHHHHHHHHHTTT-TCCEEEEE
T ss_pred HHHHHHHH---HCCCEEEEeCCCCCC--------------------CCCCcHHH-HHHHHHHHHHHhcccc-CCcEEEEE
Confidence 44556666 789999999987531 12455655 9999999999877541 24999999
Q ss_pred EehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcC--CCCCch
Q 012210 251 HSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYP--LSSSPP 328 (468)
Q Consensus 251 hS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 328 (468)
+|+||.+++.++.+. ...+++++++|++.+..+....... .. ...+..... ....+.. ......
T Consensus 103 ~SaGG~lA~~~a~~~--~~~~~~~~~~vl~~~~~~~~~~~~~-----~~------~~~~~~~~~-~~~~~~~~~~~~~~~ 168 (274)
T 2qru_A 103 RSAGGYLMLQLTKQL--QTLNLTPQFLVNFYGYTDLEFIKEP-----RK------LLKQAISAK-EIAAIDQTKPVWDDP 168 (274)
T ss_dssp ETHHHHHHHHHHHHH--HHTTCCCSCEEEESCCSCSGGGGSC-----CC------SCSSCCCSG-GGTTSCCSSCCSCCT
T ss_pred ECHHHHHHHHHHHHH--hcCCCCceEEEEEcccccccccCCc-----hh------hccccccHH-HHhhhcccCCCCCCc
Confidence 999999999999732 0115678999988765441110000 00 000000000 0000000 000000
Q ss_pred hHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccc-cccCccCccEEEEecCCCCc
Q 012210 329 YVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYK-DHIHKCNIPILAIAGDQDLI 407 (468)
Q Consensus 329 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~I~vPvLiI~G~~D~i 407 (468)
....+.... .... .. .+. .+....-.......... ..+.++ .|+|+++|+.|.+
T Consensus 169 ~~~~~~~~~---------------~~~~--~~------~~~-~~~~~~~~~~~~~~~~~~~~l~~l-pP~li~~G~~D~~ 223 (274)
T 2qru_A 169 FLSRYLLYH---------------YSIQ--QA------LLP-HFYGLPENGDWSAYALSDETLKTF-PPCFSTASSSDEE 223 (274)
T ss_dssp TCTTHHHHH---------------HHHH--TT------CHH-HHHTCCTTSCCGGGCCCHHHHHTS-CCEEEEEETTCSS
T ss_pred cccchhhhh---------------hhhh--hc------chh-hccCcccccccccCCCChhhhcCC-CCEEEEEecCCCC
Confidence 000000000 0000 00 000 00000000000000011 134566 8999999999999
Q ss_pred CCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 408 CPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 408 vp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
++...++++.+.+++. +++++ ++++|..+.+. .....+++.+.+.+||+++
T Consensus 224 ~~~~~~~~l~~~~~~~--~l~~~--~g~~H~~~~~~--~~~~~~~~~~~~~~fl~~~ 274 (274)
T 2qru_A 224 VPFRYSKKIGRTIPES--TFKAV--YYLEHDFLKQT--KDPSVITLFEQLDSWLKER 274 (274)
T ss_dssp SCTHHHHHHHHHSTTC--EEEEE--CSCCSCGGGGT--TSHHHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHhCCCc--EEEEc--CCCCcCCccCc--CCHHHHHHHHHHHHHHhhC
Confidence 9999999999999976 88888 89999876541 1123346788999999864
|
| >4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=8.4e-11 Score=114.14 Aligned_cols=127 Identities=21% Similarity=0.232 Sum_probs=95.6
Q ss_pred hhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhh
Q 012210 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQA 305 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~ 305 (468)
+++.++++.+..+.+.+.++|+++|||+||.+++.++.++ +.++.++|.+++....
T Consensus 139 ~~l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~-----p~~~a~vv~~sG~l~~------------------- 194 (285)
T 4fhz_A 139 RDLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRR-----AEEIAGIVGFSGRLLA------------------- 194 (285)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHS-----SSCCSEEEEESCCCSC-------------------
T ss_pred HHHHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhC-----cccCceEEEeecCccC-------------------
Confidence 6788888888888777777999999999999999999987 8899999988753210
Q ss_pred cCCCCcchHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccc
Q 012210 306 LNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFF 385 (468)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (468)
++...
T Consensus 195 ----------------------------------------~~~~~----------------------------------- 199 (285)
T 4fhz_A 195 ----------------------------------------PERLA----------------------------------- 199 (285)
T ss_dssp ----------------------------------------HHHHH-----------------------------------
T ss_pred ----------------------------------------chhhh-----------------------------------
Confidence 00000
Q ss_pred cccccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCC--ceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 386 YKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPED--LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 386 ~~~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~--~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
...+.++|+|++||++|.++|.+.++++.+.+... .++++++ ++.+|.... +....+.+||++
T Consensus 200 ---~~~~~~~Pvl~~hG~~D~~Vp~~~~~~~~~~L~~~g~~~~~~~y--~g~gH~i~~----------~~l~~~~~fL~~ 264 (285)
T 4fhz_A 200 ---EEARSKPPVLLVHGDADPVVPFADMSLAGEALAEAGFTTYGHVM--KGTGHGIAP----------DGLSVALAFLKE 264 (285)
T ss_dssp ---HHCCCCCCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEE--TTCCSSCCH----------HHHHHHHHHHHH
T ss_pred ---hhhhhcCcccceeeCCCCCcCHHHHHHHHHHHHHCCCCEEEEEE--CCCCCCCCH----------HHHHHHHHHHHH
Confidence 00124689999999999999999988888776533 4577777 888886543 235778999998
Q ss_pred ccC
Q 012210 464 YDS 466 (468)
Q Consensus 464 ~~~ 466 (468)
+.+
T Consensus 265 ~Lp 267 (285)
T 4fhz_A 265 RLP 267 (285)
T ss_dssp HCC
T ss_pred HCc
Confidence 753
|
| >3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A | Back alignment and structure |
|---|
Probab=99.26 E-value=1.1e-11 Score=118.77 Aligned_cols=119 Identities=15% Similarity=0.146 Sum_probs=67.5
Q ss_pred cccccccccccccccchhh---HHHHHHhhhhcCceEeccCccccccCCccchHHHhh---cc-cceE-----eecCChh
Q 012210 154 LSSLLERRQSSAIAIQIRD---LSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQK---QL-DLIV-----QYDWDFD 221 (468)
Q Consensus 154 ~~~ll~~~~~~G~~~~i~~---~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~---~~-~~~~-----~~D~~~~ 221 (468)
.+.++-.++..|....+.. +.+.++ ..||.|++||..+++....... .+.- .+ +.-. ...+.+.
T Consensus 47 ~p~vv~lHG~~~~~~~~~~~~~~~~~~~---~~g~~vv~pd~~~~g~~~~~~~-~~~~G~g~~~~~~~~~~~~~~~~~~~ 122 (280)
T 3i6y_A 47 VPVLYWLSGLTCSDENFMQKAGAQRLAA---ELGIAIVAPDTSPRGEGVADDE-GYDLGQGAGFYVNATQAPWNRHYQMY 122 (280)
T ss_dssp EEEEEEECCTTCCSSHHHHHSCCHHHHH---HHTCEEEEECSSCCSTTCCCCS-STTSSTTCCTTCBCCSTTGGGTCBHH
T ss_pred ccEEEEecCCCCChhHHhhcccHHHHHh---hCCeEEEEeCCcccccccCccc-ccccccCccccccccCCCccchhhHH
Confidence 3445554443333333322 445555 6799999999876654322110 0000 00 0000 0001222
Q ss_pred hHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccc
Q 012210 222 HYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 222 ~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
++..+|+.. ++...... .++++++||||||.+++.+|.++ |+.++++|+++|...
T Consensus 123 ~~~~~~~~~---~~~~~~~~-~~~i~l~G~S~GG~~a~~~a~~~-----p~~~~~~v~~s~~~~ 177 (280)
T 3i6y_A 123 DYVVNELPE---LIESMFPV-SDKRAIAGHSMGGHGALTIALRN-----PERYQSVSAFSPINN 177 (280)
T ss_dssp HHHHTHHHH---HHHHHSSE-EEEEEEEEETHHHHHHHHHHHHC-----TTTCSCEEEESCCCC
T ss_pred HHHHHHHHH---HHHHhCCC-CCCeEEEEECHHHHHHHHHHHhC-----CccccEEEEeCCccc
Confidence 322244444 44444433 24899999999999999999997 889999999998665
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A | Back alignment and structure |
|---|
Probab=99.18 E-value=7.5e-11 Score=118.90 Aligned_cols=164 Identities=18% Similarity=0.209 Sum_probs=109.8
Q ss_pred hcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHH
Q 012210 182 EEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAM 261 (468)
Q Consensus 182 ~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~ 261 (468)
.+|+.+++||..+..+. ... +...+. ........ +|+.++++++..+.+.+.++++++||||||.+++.+
T Consensus 211 ~~~~~vv~pd~~g~~~~-~~~---~~~~~~-----~~~~~~~~-~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~ 280 (380)
T 3doh_A 211 VHPCFVLAPQCPPNSSW-STL---FTDREN-----PFNPEKPL-LAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTA 280 (380)
T ss_dssp TSCCEEEEECCCTTCCS-BTT---TTCSSC-----TTSBCHHH-HHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHH
T ss_pred cCCEEEEEecCCCCCcc-ccc---cccccc-----ccCCcchH-HHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHH
Confidence 57889999998865431 110 100000 01112333 888999999988877654589999999999999999
Q ss_pred HHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCchhHHHHHHHhhhcc
Q 012210 262 LSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAE 341 (468)
Q Consensus 262 a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 341 (468)
+.++ |+.++++|++++...
T Consensus 281 a~~~-----p~~~~~~v~~sg~~~-------------------------------------------------------- 299 (380)
T 3doh_A 281 IMEF-----PELFAAAIPICGGGD-------------------------------------------------------- 299 (380)
T ss_dssp HHHC-----TTTCSEEEEESCCCC--------------------------------------------------------
T ss_pred HHhC-----CccceEEEEecCCCC--------------------------------------------------------
Confidence 9987 888999999887420
Q ss_pred ccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccC-ccEEEEecCCCCcCCHHHHHHHHHhC
Q 012210 342 DMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCN-IPILAIAGDQDLICPPEAVEETVKLL 420 (468)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~-vPvLiI~G~~D~ivp~~~~~~l~~~i 420 (468)
...+.++. +|+|+++|+.|.++|++.++.+.+.+
T Consensus 300 ---------------------------------------------~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l 334 (380)
T 3doh_A 300 ---------------------------------------------VSKVERIKDIPIWVFHAEDDPVVPVENSRVLVKKL 334 (380)
T ss_dssp ---------------------------------------------GGGGGGGTTSCEEEEEETTCSSSCTHHHHHHHHHH
T ss_pred ---------------------------------------------hhhhhhccCCCEEEEecCCCCccCHHHHHHHHHHH
Confidence 01123344 89999999999999999998888877
Q ss_pred CCC--ceeEEEecCCCCCCCCcccccccccchhhHHH--HHHHHHhhcc
Q 012210 421 PED--LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYP--CIVQFLGRYD 465 (468)
Q Consensus 421 p~~--~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~--~I~~FL~~~~ 465 (468)
... ..+++++ |++.|..|. +.+.......+. .+.+||.++.
T Consensus 335 ~~~g~~~~~~~~--~~~~h~~h~--~~~H~~~~~~~~~~~i~~wL~~~~ 379 (380)
T 3doh_A 335 AEIGGKVRYTEY--EKGFMEKHG--WDPHGSWIPTYENQEAIEWLFEQS 379 (380)
T ss_dssp HHTTCCEEEEEE--CTTHHHHTT--CCTTCTHHHHHTCHHHHHHHHTCC
T ss_pred HHCCCceEEEEe--cCCcccCCC--CCCchhHHHhcCCHHHHHHHHhhc
Confidence 642 4577777 888332220 000012233344 8999998764
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A | Back alignment and structure |
|---|
Probab=99.18 E-value=7.8e-11 Score=115.84 Aligned_cols=211 Identities=12% Similarity=0.069 Sum_probs=120.0
Q ss_pred cccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCC
Q 012210 164 SAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKD 243 (468)
Q Consensus 164 ~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~ 243 (468)
.|-...+..++..| ..+|.|+++|+.|++..- +........++++++ +|+.+.++.+...
T Consensus 101 ~~~~~~~~~l~~~L----~~~~~v~~~d~~G~g~~~----------~~~~~~~~~~~~~~a-~~~~~~i~~~~~~----- 160 (319)
T 2hfk_A 101 NGGPHEFLRLSTSF----QEERDFLAVPLPGYGTGT----------GTGTALLPADLDTAL-DAQARAILRAAGD----- 160 (319)
T ss_dssp TCSTTTTHHHHHTT----TTTCCEEEECCTTCCBC-------------CBCCEESSHHHHH-HHHHHHHHHHHTT-----
T ss_pred CCcHHHHHHHHHhc----CCCCceEEecCCCCCCCc----------ccccCCCCCCHHHHH-HHHHHHHHHhcCC-----
Confidence 34444455555554 479999999999886510 000001234677776 7777777665422
Q ss_pred CcEEEEEEehhHHHHHHHHHhcCCCCC-cccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcC
Q 012210 244 GKLLAIGHSMGGILLYAMLSRCGFEGR-ESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYP 322 (468)
Q Consensus 244 ~~v~lvGhS~GG~ia~~~a~~~~~~~~-p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (468)
++++++||||||.+++.+|.+++. . ..+|.++|++++....... .+. .++..+
T Consensus 161 ~p~~l~G~S~GG~vA~~~A~~l~~--~~g~~v~~lvl~d~~~~~~~~--~~~--------------------~~~~~l-- 214 (319)
T 2hfk_A 161 APVVLLGHAGGALLAHELAFRLER--AHGAPPAGIVLVDPYPPGHQE--PIE--------------------VWSRQL-- 214 (319)
T ss_dssp SCEEEEEETHHHHHHHHHHHHHHH--HHSCCCSEEEEESCCCTTSCH--HHH--------------------HTHHHH--
T ss_pred CCEEEEEECHHHHHHHHHHHHHHH--hhCCCceEEEEeCCCCCCchh--HHH--------------------HHHHHh--
Confidence 389999999999999999998610 0 1359999999875432110 000 000000
Q ss_pred CCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEec
Q 012210 323 LSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAG 402 (468)
Q Consensus 323 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G 402 (468)
...++...+ .......+. ....+...+. . .....+++|+++++|
T Consensus 215 -------~~~~~~~~~---~~~~~~~~~-------------~~~~~~~~~~-----------~--~~~~~i~~Pvl~i~g 258 (319)
T 2hfk_A 215 -------GEGLFAGEL---EPMSDARLL-------------AMGRYARFLA-----------G--PRPGRSSAPVLLVRA 258 (319)
T ss_dssp -------HHHHHHTCS---SCCCHHHHH-------------HHHHHHHHHH-----------S--CCCCCCCSCEEEEEE
T ss_pred -------hHHHHHhhc---cccchHHHH-------------HHHHHHHHHH-----------h--CCCCCcCCCEEEEEc
Confidence 000000000 000000000 0111111111 0 124779999999999
Q ss_pred CCCCcCCHHH-HHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccC
Q 012210 403 DQDLICPPEA-VEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 466 (468)
Q Consensus 403 ~~D~ivp~~~-~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~ 466 (468)
+|.++++.. ...+.+.+++ ..+++.+ + ++|+.++. +.++.+.+.|.+||.+...
T Consensus 259 -~D~~~~~~~~~~~~~~~~~~-~~~~~~v--~-g~H~~~~~-----e~~~~~~~~i~~~L~~~~~ 313 (319)
T 2hfk_A 259 -SEPLGDWQEERGDWRAHWDL-PHTVADV--P-GDHFTMMR-----DHAPAVAEAVLSWLDAIEG 313 (319)
T ss_dssp -SSCSSCCCGGGCCCSCCCSS-CSEEEEE--S-SCTTHHHH-----TCHHHHHHHHHHHHHHHHC
T ss_pred -CCCCCCccccccchhhcCCC-CCEEEEe--C-CCcHHHHH-----HhHHHHHHHHHHHHHhcCC
Confidence 999988765 5555555553 3477777 5 68886542 2789999999999987643
|
| >2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.17 E-value=2.6e-10 Score=107.55 Aligned_cols=110 Identities=16% Similarity=0.227 Sum_probs=67.5
Q ss_pred ccccccccccccccchhh--HHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCC-hhhHHhhhHHHH
Q 012210 155 SSLLERRQSSAIAIQIRD--LSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWD-FDHYLEEDVPAA 231 (468)
Q Consensus 155 ~~ll~~~~~~G~~~~i~~--~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~-~~~~~~~D~~a~ 231 (468)
+.++-.++..|-...+.. ....++ -..||.|++||..+.... ... .... .+.+ .+|+..+
T Consensus 42 p~vv~~HG~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~---~~~-----------~~~~~~~~~-~~~~~~~ 104 (263)
T 2uz0_A 42 PVLYLLHGMSGNHNSWLKRTNVERLL--RGTNLIVVMPNTSNGWYT---DTQ-----------YGFDYYTAL-AEELPQV 104 (263)
T ss_dssp CEEEEECCTTCCTTHHHHHSCHHHHT--TTCCCEEEECCCTTSTTS---BCT-----------TSCBHHHHH-HTHHHHH
T ss_pred CEEEEECCCCCCHHHHHhccCHHHHH--hcCCeEEEEECCCCCccc---cCC-----------CcccHHHHH-HHHHHHH
Confidence 445554444444443433 223333 047999999887544221 000 0111 2233 3777777
Q ss_pred HHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccC
Q 012210 232 MEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYT 287 (468)
Q Consensus 232 i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~ 287 (468)
++.+..+...+..+++++|||+||.+++.+|. + |++++++|++++.....
T Consensus 105 i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~-----~~~~~~~v~~~~~~~~~ 154 (263)
T 2uz0_A 105 LKRFFPNMTSKREKTFIAGLSMGGYGCFKLAL-T-----TNRFSHAASFSGALSFQ 154 (263)
T ss_dssp HHHHCTTBCCCGGGEEEEEETHHHHHHHHHHH-H-----HCCCSEEEEESCCCCSS
T ss_pred HHHHhccccCCCCceEEEEEChHHHHHHHHHh-C-----ccccceEEEecCCcchh
Confidence 77654423333358999999999999999998 7 88999999999876543
|
| >3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.15 E-value=4.3e-10 Score=107.43 Aligned_cols=100 Identities=14% Similarity=0.180 Sum_probs=59.2
Q ss_pred HHHHHHhhhhcCceEeccCccccccCCccchHHHh--h-cc-cceE-----eecCChhhHHhhhHHHHHHHHHhhcCCCC
Q 012210 173 LSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQ--K-QL-DLIV-----QYDWDFDHYLEEDVPAAMEYIRAQSKPKD 243 (468)
Q Consensus 173 ~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~--~-~~-~~~~-----~~D~~~~~~~~~D~~a~i~~l~~~~~~~~ 243 (468)
+.+.++ ..||.|++||..+++....... .+. . .+ +... ...+.+.++..+++.. ++...... .
T Consensus 67 ~~~~~~---~~g~~vv~~d~~~~g~~~~~~~-~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~i~~~~~~-~ 138 (280)
T 3ls2_A 67 AFKKAA---ELGIAIVAPDTSPRGDNVPNED-SYDFAQGAGFYVNATQAPYNTHFNMYDYVVNELPA---LIEQHFPV-T 138 (280)
T ss_dssp CHHHHH---HHTCEEEECCSSCCSTTSCCCS-CTTSSTTCCTTCBCCSTTTTTTCBHHHHHHTHHHH---HHHHHSSE-E
T ss_pred HHHHHh---hCCeEEEEeCCccccccccccc-ccccccCCccccccccccccccccHHHHHHHHHHH---HHHhhCCC-C
Confidence 344555 6799999999876543211110 000 0 00 0000 0001222333344444 44444333 1
Q ss_pred CcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccc
Q 012210 244 GKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 244 ~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
++++++||||||.+++.+|.++ |+.+++++++++..+
T Consensus 139 ~~~~l~G~S~GG~~a~~~a~~~-----p~~~~~~~~~s~~~~ 175 (280)
T 3ls2_A 139 STKAISGHSMGGHGALMIALKN-----PQDYVSASAFSPIVN 175 (280)
T ss_dssp EEEEEEEBTHHHHHHHHHHHHS-----TTTCSCEEEESCCSC
T ss_pred CCeEEEEECHHHHHHHHHHHhC-----chhheEEEEecCccC
Confidence 4899999999999999999997 889999999988655
|
| >4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.14 E-value=4.8e-10 Score=113.04 Aligned_cols=66 Identities=18% Similarity=0.176 Sum_probs=50.6
Q ss_pred CccCccEEEEecCCCCcCCHHHHHHHHHhCCCCc-eeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 391 HKCNIPILAIAGDQDLICPPEAVEETVKLLPEDL-VTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 391 ~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~-~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
.++++|+|++||..|.++|++.++++++.+.... ++++.+ ++ +|..|.. ......+.+.+||+++.
T Consensus 304 ~~~~~Pvli~hG~~D~~Vp~~~~~~l~~~l~~~G~v~~~~~--~~-~~~~H~~------~~~~~~~~~~~wl~~~~ 370 (377)
T 4ezi_A 304 FKPTAPLLLVGTKGDRDVPYAGAEMAYHSFRKYSDFVWIKS--VS-DALDHVQ------AHPFVLKEQVDFFKQFE 370 (377)
T ss_dssp SCCSSCEEEEECTTCSSSCHHHHHHHHHHHHTTCSCEEEEE--SC-SSCCTTT------THHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhcCCEEEEEc--CC-CCCCccC------hHHHHHHHHHHHHHHhh
Confidence 3689999999999999999999999988775322 677877 65 3455554 33567788899998764
|
| >1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A | Back alignment and structure |
|---|
Probab=99.14 E-value=3.7e-11 Score=116.29 Aligned_cols=93 Identities=17% Similarity=0.287 Sum_probs=61.1
Q ss_pred cchhhHHHHHHhhhhc--CceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCc
Q 012210 168 IQIRDLSQNLVNMIEE--GQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGK 245 (468)
Q Consensus 168 ~~i~~~a~~la~~l~~--Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~ 245 (468)
..++.+++.|+ .+ ||.|+++|+ |++.. .+ .. .++ ..++. +++..+++.+....... .+
T Consensus 22 ~~~~~~~~~L~---~~~~g~~v~~~d~-G~g~s----~~-~~-~~~-----~~~~~----~~~~~~~~~l~~~~~l~-~~ 81 (279)
T 1ei9_A 22 LSMGAIKKMVE---KKIPGIHVLSLEI-GKTLR----ED-VE-NSF-----FLNVN----SQVTTVCQILAKDPKLQ-QG 81 (279)
T ss_dssp TTTHHHHHHHH---HHSTTCCEEECCC-SSSHH----HH-HH-HHH-----HSCHH----HHHHHHHHHHHSCGGGT-TC
T ss_pred ccHHHHHHHHH---HHCCCcEEEEEEe-CCCCc----cc-cc-ccc-----ccCHH----HHHHHHHHHHHhhhhcc-CC
Confidence 35677888887 54 889999997 77541 11 00 011 11233 44445555555421111 38
Q ss_pred EEEEEEehhHHHHHHHHHhcCCCCCcc-cccceeEEccccc
Q 012210 246 LLAIGHSMGGILLYAMLSRCGFEGRES-RLAAIVTLASSLD 285 (468)
Q Consensus 246 v~lvGhS~GG~ia~~~a~~~~~~~~p~-~V~~lVllap~~~ 285 (468)
+++|||||||.++..++.++ |+ +|+++|+++++..
T Consensus 82 ~~lvGhSmGG~ia~~~a~~~-----~~~~v~~lv~~~~p~~ 117 (279)
T 1ei9_A 82 YNAMGFSQGGQFLRAVAQRC-----PSPPMVNLISVGGQHQ 117 (279)
T ss_dssp EEEEEETTHHHHHHHHHHHC-----CSSCEEEEEEESCCTT
T ss_pred EEEEEECHHHHHHHHHHHHc-----CCcccceEEEecCccC
Confidence 99999999999999999998 65 5999999987543
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 | Back alignment and structure |
|---|
Probab=99.12 E-value=7.2e-10 Score=102.96 Aligned_cols=65 Identities=12% Similarity=0.079 Sum_probs=48.1
Q ss_pred ccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCC--CCcccccccccchhhHHHHHHHHHhhc
Q 012210 389 HIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPH--YAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 389 ~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH--~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
...++++|+++++|++|.+++ .....+.+..++ ..+++.+ ++ +| +.+.+ .++.+.+.|.+||.++
T Consensus 163 ~~~~~~~P~l~i~g~~D~~~~-~~~~~w~~~~~~-~~~~~~i--~g-~H~~~~~~~------~~~~~~~~i~~~l~~~ 229 (230)
T 1jmk_C 163 STGQVKADIDLLTSGADFDIP-EWLASWEEATTG-AYRMKRG--FG-THAEMLQGE------TLDRNAGILLEFLNTQ 229 (230)
T ss_dssp CCSCBSSEEEEEECSSCCCCC-TTEECSGGGBSS-CEEEEEC--SS-CGGGTTSHH------HHHHHHHHHHHHHTCB
T ss_pred ccccccccEEEEEeCCCCCCc-cccchHHHhcCC-CeEEEEe--cC-ChHHHcCcH------hHHHHHHHHHHHHhhc
Confidence 457899999999999999987 333344444443 3577777 65 88 66655 7889999999999864
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=99.12 E-value=1.4e-10 Score=114.75 Aligned_cols=223 Identities=15% Similarity=0.081 Sum_probs=123.1
Q ss_pred ccccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHH
Q 012210 155 SSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEY 234 (468)
Q Consensus 155 ~~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~ 234 (468)
..++-.|.+.|....+..++..| ..+|.|+++|+.|++.. .. ...++++++ +++.+.+..
T Consensus 102 ~~l~~lhg~~~~~~~~~~l~~~L----~~~~~v~~~d~~g~~~~-----~~----------~~~~~~~~a-~~~~~~i~~ 161 (329)
T 3tej_A 102 PTLFCFHPASGFAWQFSVLSRYL----DPQWSIIGIQSPRPNGP-----MQ----------TAANLDEVC-EAHLATLLE 161 (329)
T ss_dssp CEEEEECCTTSCCGGGGGGGGTS----CTTCEEEEECCCTTTSH-----HH----------HCSSHHHHH-HHHHHHHHH
T ss_pred CcEEEEeCCcccchHHHHHHHhc----CCCCeEEEeeCCCCCCC-----CC----------CCCCHHHHH-HHHHHHHHH
Confidence 34555555666666666666555 47899999999887541 00 122456665 665555544
Q ss_pred HHhhcCCCCCcEEEEEEehhHHHHHHHHHh---cCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCc
Q 012210 235 IRAQSKPKDGKLLAIGHSMGGILLYAMLSR---CGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVV 311 (468)
Q Consensus 235 l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~---~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (468)
+. +. ++++++||||||.+++.+|.+ + +.+|.++|++++..+.... .. ... ......
T Consensus 162 ~~---~~--~~~~l~G~S~Gg~ia~~~a~~L~~~-----~~~v~~lvl~d~~~~~~~~------~~---~~~-~~~~~~- 220 (329)
T 3tej_A 162 QQ---PH--GPYYLLGYSLGGTLAQGIAARLRAR-----GEQVAFLGLLDTWPPETQN------WQ---EKE-ANGLDP- 220 (329)
T ss_dssp HC---SS--SCEEEEEETHHHHHHHHHHHHHHHT-----TCCEEEEEEESCCCTHHHH------TC---------CCCC-
T ss_pred hC---CC--CCEEEEEEccCHHHHHHHHHHHHhc-----CCcccEEEEeCCCCCCccc------cc---ccc-ccccCh-
Confidence 32 22 389999999999999999998 5 7889999999875442110 00 000 000000
Q ss_pred chHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcC-cccccCCcccccccc
Q 012210 312 PLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREG-GLRDRGGKFFYKDHI 390 (468)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l 390 (468)
..... +......+ ............+..+...+... .+. .....
T Consensus 221 ---~~~~~----------~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 265 (329)
T 3tej_A 221 ---EVLAE----------INREREAF---------------LAAQQGSTSTELFTTIEGNYADAVRLL-------TTAHS 265 (329)
T ss_dssp ---THHHH----------HHHHHHHH---------------HHTTCCCSCCHHHHHHHHHHHHHHHHH-------TTCCC
T ss_pred ---hhHHH----------HHHHHHHH---------------HHhccccccHHHHHHHHHHHHHHHHHH-------hcCCC
Confidence 00000 00000000 00000111111111111111000 000 01124
Q ss_pred CccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 012210 391 HKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 462 (468)
Q Consensus 391 ~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~ 462 (468)
..+.+|++++.|++|...+.+....+.+.+++ .+++.+ + ++|+.+++ ....+.+.+.|.+||.
T Consensus 266 ~~~~~pv~l~~~~~d~~~~~~~~~~w~~~~~~--~~~~~v--~-g~H~~~~~----~~~~~~ia~~l~~~L~ 328 (329)
T 3tej_A 266 VPFDGKATLFVAERTLQEGMSPERAWSPWIAE--LDIYRQ--D-CAHVDIIS----PGTFEKIGPIIRATLN 328 (329)
T ss_dssp CCEEEEEEEEEEGGGCCTTCCHHHHHTTTEEE--EEEEEE--S-SCGGGGGS----TTTHHHHHHHHHHHHC
T ss_pred CCcCCCeEEEEeccCCCCCCCchhhHHHhcCC--cEEEEe--c-CChHHhCC----ChHHHHHHHHHHHHhc
Confidence 57899999999999998877666667666653 477777 4 78888876 1123778888888885
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=7.1e-10 Score=109.21 Aligned_cols=88 Identities=16% Similarity=0.061 Sum_probs=66.0
Q ss_pred hh-hHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEE
Q 012210 170 IR-DLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLA 248 (468)
Q Consensus 170 i~-~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~l 248 (468)
+. .+++.|+ .+||.|+++|+.+++.. +..... +++.++++++....+.. ++++
T Consensus 48 ~~~~l~~~L~---~~G~~v~~~d~~g~g~~--------------------~~~~~~-~~l~~~i~~~~~~~g~~--~v~l 101 (317)
T 1tca_A 48 FDSNWIPLST---QLGYTPCWISPPPFMLN--------------------DTQVNT-EYMVNAITALYAGSGNN--KLPV 101 (317)
T ss_dssp HTTTHHHHHH---TTTCEEEEECCTTTTCS--------------------CHHHHH-HHHHHHHHHHHHHTTSC--CEEE
T ss_pred hHHHHHHHHH---hCCCEEEEECCCCCCCC--------------------cHHHHH-HHHHHHHHHHHHHhCCC--CEEE
Confidence 55 6778887 78999999999876321 112223 77888888888776654 9999
Q ss_pred EEEehhHHHHHHHHHhcCCCCCcccccceeEEccccc
Q 012210 249 IGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 249 vGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
|||||||.++..++..++. .+++|+++|+++++..
T Consensus 102 VGhS~GG~va~~~~~~~~~--~~~~v~~lV~l~~~~~ 136 (317)
T 1tca_A 102 LTWSQGGLVAQWGLTFFPS--IRSKVDRLMAFAPDYK 136 (317)
T ss_dssp EEETHHHHHHHHHHHHCGG--GTTTEEEEEEESCCTT
T ss_pred EEEChhhHHHHHHHHHcCc--cchhhhEEEEECCCCC
Confidence 9999999999998877510 0268999999998754
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A | Back alignment and structure |
|---|
Probab=99.09 E-value=5.8e-10 Score=107.64 Aligned_cols=96 Identities=13% Similarity=0.092 Sum_probs=61.9
Q ss_pred cccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHH
Q 012210 156 SLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYI 235 (468)
Q Consensus 156 ~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l 235 (468)
.++-.|.+.|-...++.++..| . +.|+++|+.+.. ..+++++++ +|+.+.++.+
T Consensus 26 ~l~~~hg~~~~~~~~~~~~~~L----~--~~v~~~d~~~~~-------------------~~~~~~~~a-~~~~~~i~~~ 79 (283)
T 3tjm_A 26 PLFLVHPIEGSTTVFHSLASRL----S--IPTYGLQCTRAA-------------------PLDSIHSLA-AYYIDCIRQV 79 (283)
T ss_dssp CEEEECCTTCCSGGGHHHHHHC----S--SCEEEECCCTTS-------------------CCSCHHHHH-HHHHHHHTTT
T ss_pred eEEEECCCCCCHHHHHHHHHhc----C--ceEEEEecCCCC-------------------CCCCHHHHH-HHHHHHHHHh
Confidence 3455455555555555555544 3 889998884310 123566665 6666666543
Q ss_pred HhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCccccc---ceeEEcccc
Q 012210 236 RAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLA---AIVTLASSL 284 (468)
Q Consensus 236 ~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~---~lVllap~~ 284 (468)
.. .++++++||||||.+++.+|.++. ..+.++. ++|++++..
T Consensus 80 ~~-----~~~~~l~GhS~Gg~va~~~a~~~~--~~~~~v~~~~~lvlid~~~ 124 (283)
T 3tjm_A 80 QP-----EGPYRVAGYSYGACVAFEMCSQLQ--AQQSPAPTHNSLFLFDGSP 124 (283)
T ss_dssp CC-----SSCCEEEEETHHHHHHHHHHHHHH--HHHTTSCCCCEEEEESCCT
T ss_pred CC-----CCCEEEEEECHhHHHHHHHHHHHH--HcCCCCCccceEEEEcCCc
Confidence 21 148999999999999999998641 1145677 999998754
|
| >4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=99.08 E-value=7.2e-10 Score=106.24 Aligned_cols=51 Identities=25% Similarity=0.410 Sum_probs=39.8
Q ss_pred hhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccc
Q 012210 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
+++...++.. ... .++++++||||||.+++.+|.++ |+.++++++++|..+
T Consensus 131 ~~~~~~i~~~---~~~-~~~~~l~G~S~GG~~a~~~a~~~-----p~~~~~~~~~s~~~~ 181 (283)
T 4b6g_A 131 NELPRLIEKH---FPT-NGKRSIMGHSMGGHGALVLALRN-----QERYQSVSAFSPILS 181 (283)
T ss_dssp THHHHHHHHH---SCE-EEEEEEEEETHHHHHHHHHHHHH-----GGGCSCEEEESCCCC
T ss_pred HHHHHHHHHh---CCC-CCCeEEEEEChhHHHHHHHHHhC-----CccceeEEEECCccc
Confidence 5555555443 222 24899999999999999999997 889999999998665
|
| >1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=1e-09 Score=104.52 Aligned_cols=90 Identities=16% Similarity=0.234 Sum_probs=62.0
Q ss_pred hhhHHHHHHhhhhc----CceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCC--CC
Q 012210 170 IRDLSQNLVNMIEE----GQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKP--KD 243 (468)
Q Consensus 170 i~~~a~~la~~l~~----Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~--~~ 243 (468)
+..++++|+ .+ ||.|++||..+....+.. .+..+..+.+.++++++..+.+. +.
T Consensus 85 ~~~~~~~l~---~~g~~~~~~vv~~d~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~l~~~~~~~~d~ 144 (268)
T 1jjf_A 85 ANVIADNLI---AEGKIKPLIIVTPNTNAAGPGIAD-----------------GYENFTKDLLNSLIPYIESNYSVYTDR 144 (268)
T ss_dssp HHHHHHHHH---HTTSSCCCEEEEECCCCCCTTCSC-----------------HHHHHHHHHHHTHHHHHHHHSCBCCSG
T ss_pred HHHHHHHHH---HcCCCCCEEEEEeCCCCCCccccc-----------------cHHHHHHHHHHHHHHHHHhhcCCCCCC
Confidence 445677777 65 599999998775331110 12233212245566677666553 33
Q ss_pred CcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcccc
Q 012210 244 GKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSL 284 (468)
Q Consensus 244 ~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~ 284 (468)
.+++++||||||.+++.++.++ ++.+++++++++..
T Consensus 145 ~~i~l~G~S~GG~~a~~~a~~~-----p~~~~~~v~~s~~~ 180 (268)
T 1jjf_A 145 EHRAIAGLSMGGGQSFNIGLTN-----LDKFAYIGPISAAP 180 (268)
T ss_dssp GGEEEEEETHHHHHHHHHHHTC-----TTTCSEEEEESCCT
T ss_pred CceEEEEECHHHHHHHHHHHhC-----chhhhheEEeCCCC
Confidence 5899999999999999999987 78899999988754
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A | Back alignment and structure |
|---|
Probab=99.05 E-value=2.4e-10 Score=115.86 Aligned_cols=103 Identities=18% Similarity=0.154 Sum_probs=57.3
Q ss_pred hhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCC-CCcEEE
Q 012210 170 IRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPK-DGKLLA 248 (468)
Q Consensus 170 i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~-~~~v~l 248 (468)
...++..|+ .+||.|+++|+.|++..-..... +.. ....... . .|....+..+..+.+.. .+++++
T Consensus 106 ~~~~~~~l~---~~G~~V~~~D~~G~G~s~~~~~~------~~~--~~~~~~~-~-~d~~~~~~~~~~~~~~~~~~~i~l 172 (397)
T 3h2g_A 106 DDPLVTRLA---SQGYVVVGSDYLGLGKSNYAYHP------YLH--SASEASA-T-IDAMRAARSVLQHLKTPLSGKVML 172 (397)
T ss_dssp CSHHHHTTG---GGTCEEEEECCTTSTTCCCSSCC------TTC--HHHHHHH-H-HHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred hHHHHHHHH---HCCCEEEEecCCCCCCCCCCccc------hhh--hhhHHHH-H-HHHHHHHHHHHHhcCCCCCCcEEE
Confidence 445667777 89999999999998763111000 000 0000011 1 44455555555544441 249999
Q ss_pred EEEehhHHHHHHHHHhcCC-CCCcccccceeEEccccc
Q 012210 249 IGHSMGGILLYAMLSRCGF-EGRESRLAAIVTLASSLD 285 (468)
Q Consensus 249 vGhS~GG~ia~~~a~~~~~-~~~p~~V~~lVllap~~~ 285 (468)
+||||||.+++.++..... ......+.+++..+++.+
T Consensus 173 ~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 210 (397)
T 3h2g_A 173 SGYSQGGHTAMATQREIEAHLSKEFHLVASAPISGPYA 210 (397)
T ss_dssp EEETHHHHHHHHHHHHHHHHCTTTSEEEEEEEESCCSS
T ss_pred EEECHHHHHHHHHHHHhhhhcCcCcceEEEeccccccc
Confidence 9999999999988743200 000114566666555544
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=7.6e-10 Score=104.49 Aligned_cols=198 Identities=12% Similarity=0.074 Sum_probs=112.0
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.+.+.|-...+..++..|. .+|.|+++|+.++. +++ +++.+.++.+.
T Consensus 25 l~~~hg~~~~~~~~~~~~~~l~----~~~~v~~~d~~g~~-------------------------~~~-~~~~~~i~~~~ 74 (244)
T 2cb9_A 25 LFCFPPISGFGIYFKDLALQLN----HKAAVYGFHFIEED-------------------------SRI-EQYVSRITEIQ 74 (244)
T ss_dssp EEEECCTTCCGGGGHHHHHHTT----TTSEEEEECCCCST-------------------------THH-HHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHHhC----CCceEEEEcCCCHH-------------------------HHH-HHHHHHHHHhC
Confidence 4454555555555566666554 68999998887641 223 55556655542
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhH
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAL 316 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
. .++++++||||||.+++.+|.+++. .+.++.++|++++....... . .. .....
T Consensus 75 ---~--~~~~~l~GhS~Gg~va~~~a~~~~~--~~~~v~~lvl~~~~~~~~~~----------~------~~---~~~~~ 128 (244)
T 2cb9_A 75 ---P--EGPYVLLGYSAGGNLAFEVVQAMEQ--KGLEVSDFIIVDAYKKDQSI----------T------AD---TENDD 128 (244)
T ss_dssp ---S--SSCEEEEEETHHHHHHHHHHHHHHH--TTCCEEEEEEESCCCCCSCC----------C------CC--------
T ss_pred ---C--CCCEEEEEECHhHHHHHHHHHHHHH--cCCCccEEEEEcCCCCcccc----------c------cc---ccHHH
Confidence 1 1489999999999999999987511 13579999999875431100 0 00 00000
Q ss_pred HHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCcc
Q 012210 317 LTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIP 396 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP 396 (468)
+..+ ..+.....+ .. ....+...... ...+.++++|
T Consensus 129 ~~~~-----------------------~~~~~~~~~-~~--------~~~~~~~~~~~------------~~~~~~i~~P 164 (244)
T 2cb9_A 129 SAAY-----------------------LPEAVRETV-MQ--------KKRCYQEYWAQ------------LINEGRIKSN 164 (244)
T ss_dssp --CC-----------------------SCHHHHHHH-TH--------HHHHHHHHHHH------------CCCCSCBSSE
T ss_pred HHHH-----------------------hHHHHHHHH-HH--------HHHHHHHHHHh------------hccCCCcCCC
Confidence 0000 011100000 00 00000000000 0235679999
Q ss_pred EEEEecC--CCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCC--CCcccccccccchhhHHHHHHHHHhhcc
Q 012210 397 ILAIAGD--QDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPH--YAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 397 vLiI~G~--~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH--~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
+++++|+ +|.+ +++....+.+.+++ ..+++.+ ++ +| +.+.+ .++.+.+.|.+||.+..
T Consensus 165 vl~i~g~~~~D~~-~~~~~~~w~~~~~~-~~~~~~i--~g-gH~~~~~~~------~~~~~~~~i~~~L~~~~ 226 (244)
T 2cb9_A 165 IHFIEAGIQTETS-GAMVLQKWQDAAEE-GYAEYTG--YG-AHKDMLEGE------FAEKNANIILNILDKIN 226 (244)
T ss_dssp EEEEECSBCSCCC-HHHHTTSSGGGBSS-CEEEEEC--SS-BGGGTTSHH------HHHHHHHHHHHHHHTC-
T ss_pred EEEEEccCccccc-cccchhHHHHhcCC-CCEEEEe--cC-ChHHHcChH------HHHHHHHHHHHHHhcCc
Confidence 9999999 8874 44544555555553 4577777 64 77 55444 78999999999998654
|
| >3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A | Back alignment and structure |
|---|
Probab=98.97 E-value=7.1e-10 Score=118.36 Aligned_cols=88 Identities=18% Similarity=0.105 Sum_probs=68.6
Q ss_pred HHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehh
Q 012210 175 QNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMG 254 (468)
Q Consensus 175 ~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~G 254 (468)
+.++ .+||.|+++|..|+++.- +.. . .+.... +|+.++++++..+..++ ++|+++|||||
T Consensus 60 ~~la---~~Gy~vv~~D~RG~G~S~----------g~~----~-~~~~~~-~D~~~~i~~l~~~~~~~-~~v~l~G~S~G 119 (587)
T 3i2k_A 60 LEFV---RDGYAVVIQDTRGLFASE----------GEF----V-PHVDDE-ADAEDTLSWILEQAWCD-GNVGMFGVSYL 119 (587)
T ss_dssp HHHH---HTTCEEEEEECTTSTTCC----------SCC----C-TTTTHH-HHHHHHHHHHHHSTTEE-EEEEECEETHH
T ss_pred HHHH---HCCCEEEEEcCCCCCCCC----------Ccc----c-cccchh-HHHHHHHHHHHhCCCCC-CeEEEEeeCHH
Confidence 6677 999999999999987631 110 0 122334 99999999998764433 69999999999
Q ss_pred HHHHHHHHHhcCCCCCcccccceeEEccc-cccC
Q 012210 255 GILLYAMLSRCGFEGRESRLAAIVTLASS-LDYT 287 (468)
Q Consensus 255 G~ia~~~a~~~~~~~~p~~V~~lVllap~-~~~~ 287 (468)
|.+++.+|+.+ ++.++++|++++. .+..
T Consensus 120 G~~a~~~a~~~-----~~~l~a~v~~~~~~~d~~ 148 (587)
T 3i2k_A 120 GVTQWQAAVSG-----VGGLKAIAPSMASADLYR 148 (587)
T ss_dssp HHHHHHHHTTC-----CTTEEEBCEESCCSCTCC
T ss_pred HHHHHHHHhhC-----CCccEEEEEeCCcccccc
Confidence 99999999876 8899999999887 6543
|
| >3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=4.2e-09 Score=108.33 Aligned_cols=63 Identities=14% Similarity=0.078 Sum_probs=48.9
Q ss_pred CccCccEEEEecCCCCcCCHHHHHHHHHhCC--CCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 391 HKCNIPILAIAGDQDLICPPEAVEETVKLLP--EDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 391 ~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip--~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
.++++|+|++||.+|.++|++.++++++.+. +..++++.+ ++.+|..... .-.+.+.+||+++
T Consensus 341 ~~~~~PvlI~hG~~D~vVP~~~s~~l~~~l~~~G~~V~~~~y--~~~~H~~~~~---------~~~~d~l~WL~~r 405 (462)
T 3guu_A 341 SVPKFPRFIWHAIPDEIVPYQPAATYVKEQCAKGANINFSPY--PIAEHLTAEI---------FGLVPSLWFIKQA 405 (462)
T ss_dssp CCCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEE--SSCCHHHHHH---------HTHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCCcCCHHHHHHHHHHHHHcCCCeEEEEE--CcCCccCchh---------hhHHHHHHHHHHH
Confidence 4678999999999999999999999988774 346788887 6667665542 2267788888765
|
| >4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.94 E-value=5.4e-09 Score=99.07 Aligned_cols=129 Identities=19% Similarity=0.195 Sum_probs=89.0
Q ss_pred hhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhh
Q 012210 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQA 305 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~ 305 (468)
+.+..+++.... .+.+..+++++|+|+||++++.++.++ +..+.++|.+++..+...
T Consensus 115 ~~i~~li~~~~~-~gi~~~ri~l~GfSqGg~~a~~~~~~~-----~~~~a~~i~~sG~lp~~~----------------- 171 (246)
T 4f21_A 115 AKVNKLIDSQVN-QGIASENIILAGFSQGGIIATYTAITS-----QRKLGGIMALSTYLPAWD----------------- 171 (246)
T ss_dssp HHHHHHHHHHHH-C-CCGGGEEEEEETTTTHHHHHHHTTC-----SSCCCEEEEESCCCTTHH-----------------
T ss_pred HHHHHHHHHHHH-cCCChhcEEEEEeCchHHHHHHHHHhC-----ccccccceehhhccCccc-----------------
Confidence 344444444333 355556999999999999999999987 889999999876432100
Q ss_pred cCCCCcchHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccc
Q 012210 306 LNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFF 385 (468)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (468)
.+. ..
T Consensus 172 ------------------------------------------~~~-------~~-------------------------- 176 (246)
T 4f21_A 172 ------------------------------------------NFK-------GK-------------------------- 176 (246)
T ss_dssp ------------------------------------------HHS-------TT--------------------------
T ss_pred ------------------------------------------ccc-------cc--------------------------
Confidence 000 00
Q ss_pred cccccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCC--ceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 386 YKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPED--LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 386 ~~~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~--~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
.....-++|++++||+.|.++|.+.++++.+.+... .++++.+ ++.+|.... + ..+.+.+||++
T Consensus 177 --~~~~~~~~Pvl~~HG~~D~vVp~~~~~~~~~~L~~~g~~v~~~~y--~g~gH~i~~---------~-~l~~~~~fL~k 242 (246)
T 4f21_A 177 --ITSINKGLPILVCHGTDDQVLPEVLGHDLSDKLKVSGFANEYKHY--VGMQHSVCM---------E-EIKDISNFIAK 242 (246)
T ss_dssp --CCGGGTTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEE--SSCCSSCCH---------H-HHHHHHHHHHH
T ss_pred --ccccccCCchhhcccCCCCccCHHHHHHHHHHHHHCCCCeEEEEE--CCCCCccCH---------H-HHHHHHHHHHH
Confidence 000123689999999999999999988888877543 4577777 888886543 2 34679999998
Q ss_pred ccC
Q 012210 464 YDS 466 (468)
Q Consensus 464 ~~~ 466 (468)
+.+
T Consensus 243 ~l~ 245 (246)
T 4f21_A 243 TFK 245 (246)
T ss_dssp HTT
T ss_pred HhC
Confidence 754
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=98.93 E-value=2.4e-09 Score=114.96 Aligned_cols=96 Identities=18% Similarity=0.133 Sum_probs=68.7
Q ss_pred HHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCCh--hhHHhhhHHHHHHHHHhh-cCCCCCcEEEEEE
Q 012210 175 QNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDF--DHYLEEDVPAAMEYIRAQ-SKPKDGKLLAIGH 251 (468)
Q Consensus 175 ~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~--~~~~~~D~~a~i~~l~~~-~~~~~~~v~lvGh 251 (468)
+.|+ .+||.|+++|++|+++.-..... +. ... -+|.. .... +|+.++++++..+ ..+ +++|+++||
T Consensus 83 ~~la---~~Gy~Vv~~D~RG~g~S~g~~~~-~~---~~~--~~~~~~g~~~~-~D~~~~i~~l~~~~~~~-~~rv~l~G~ 151 (615)
T 1mpx_A 83 DVFV---EGGYIRVFQDVRGKYGSEGDYVM-TR---PLR--GPLNPSEVDHA-TDAWDTIDWLVKNVSES-NGKVGMIGS 151 (615)
T ss_dssp HHHH---HTTCEEEEEECTTSTTCCSCCCT-TC---CCS--BTTBCSSCCHH-HHHHHHHHHHHHHCTTE-EEEEEEEEE
T ss_pred HHHH---hCCeEEEEECCCCCCCCCCcccc-cc---ccc--cccccccccHH-HHHHHHHHHHHhcCCCC-CCeEEEEec
Confidence 6777 89999999999998763211100 00 000 01111 0223 9999999999987 333 359999999
Q ss_pred ehhHHHHHHHHHhcCCCCCcccccceeEEcccccc
Q 012210 252 SMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 286 (468)
Q Consensus 252 S~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~ 286 (468)
||||.+++.+|..+ +++++++|.+++..+.
T Consensus 152 S~GG~~al~~a~~~-----~~~l~a~v~~~~~~d~ 181 (615)
T 1mpx_A 152 SYEGFTVVMALTNP-----HPALKVAVPESPMIDG 181 (615)
T ss_dssp THHHHHHHHHHTSC-----CTTEEEEEEESCCCCT
T ss_pred CHHHHHHHHHhhcC-----CCceEEEEecCCcccc
Confidence 99999999999875 8899999999988773
|
| >3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=98.91 E-value=1.8e-08 Score=97.75 Aligned_cols=116 Identities=14% Similarity=0.118 Sum_probs=70.2
Q ss_pred cccccccccccccch-hhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhc---ccceEeecCChhhHHhhhHHHH
Q 012210 156 SLLERRQSSAIAIQI-RDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQ---LDLIVQYDWDFDHYLEEDVPAA 231 (468)
Q Consensus 156 ~ll~~~~~~G~~~~i-~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~---~~~~~~~D~~~~~~~~~D~~a~ 231 (468)
.++-.|+..+....+ ..+++.++ ..||.|++||+.+.. |+ ....+..+ +..-... .......+|+.++
T Consensus 56 ~vv~lHG~~~~~~~~~~~~~~~l~---~~g~~v~~~d~~~~~--~p-~~~~~~~g~~~g~s~~~~--~~~~~~~~~~~~~ 127 (304)
T 3d0k_A 56 VVVVQHGVLRNGADYRDFWIPAAD---RHKLLIVAPTFSDEI--WP-GVESYNNGRAFTAAGNPR--HVDGWTYALVARV 127 (304)
T ss_dssp EEEEECCTTCCHHHHHHHTHHHHH---HHTCEEEEEECCTTT--SC-HHHHTTTTTCBCTTSCBC--CGGGSTTHHHHHH
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHH---HCCcEEEEeCCcccc--CC-CccccccCccccccCCCC--cccchHHHHHHHH
Confidence 344434433333333 44566676 789999999997431 11 00001000 0000000 0111222678889
Q ss_pred HHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCc-ccccceeEEcccc
Q 012210 232 MEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRE-SRLAAIVTLASSL 284 (468)
Q Consensus 232 i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p-~~V~~lVllap~~ 284 (468)
++++..+...+.++++++||||||.+++.++..+ + .+++++|+++++.
T Consensus 128 ~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~-----p~~~~~~~vl~~~~~ 176 (304)
T 3d0k_A 128 LANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQ-----PHAPFHAVTAANPGW 176 (304)
T ss_dssp HHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHS-----CSTTCSEEEEESCSS
T ss_pred HHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHC-----CCCceEEEEEecCcc
Confidence 9999887655556999999999999999999986 5 3788888877543
|
| >3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A* | Back alignment and structure |
|---|
Probab=98.84 E-value=8.6e-09 Score=109.08 Aligned_cols=89 Identities=19% Similarity=0.141 Sum_probs=69.6
Q ss_pred HHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEeh
Q 012210 174 SQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSM 253 (468)
Q Consensus 174 a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~ 253 (468)
++.|+ .+||.|+++|..|+++.. |... .+. .... +|+.++++++..+..++ ++|+++||||
T Consensus 110 ~~~la---~~Gy~vv~~D~RG~G~S~----------G~~~---~~~-~~~~-~D~~~~i~~l~~~~~~~-~~igl~G~S~ 170 (560)
T 3iii_A 110 PGFWV---PNDYVVVKVALRGSDKSK----------GVLS---PWS-KREA-EDYYEVIEWAANQSWSN-GNIGTNGVSY 170 (560)
T ss_dssp HHHHG---GGTCEEEEEECTTSTTCC----------SCBC---TTS-HHHH-HHHHHHHHHHHTSTTEE-EEEEEEEETH
T ss_pred HHHHH---hCCCEEEEEcCCCCCCCC----------Cccc---cCC-hhHH-HHHHHHHHHHHhCCCCC-CcEEEEccCH
Confidence 67788 999999999999987631 1110 111 1333 99999999998875443 6999999999
Q ss_pred hHHHHHHHHHhcCCCCCcccccceeEEcccccc
Q 012210 254 GGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 286 (468)
Q Consensus 254 GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~ 286 (468)
||.+++.+|+.. ++.++++|..++..+.
T Consensus 171 GG~~al~~a~~~-----p~~l~aiv~~~~~~d~ 198 (560)
T 3iii_A 171 LAVTQWWVASLN-----PPHLKAMIPWEGLNDM 198 (560)
T ss_dssp HHHHHHHHHTTC-----CTTEEEEEEESCCCBH
T ss_pred HHHHHHHHHhcC-----CCceEEEEecCCcccc
Confidence 999999999875 8899999999887663
|
| >2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A | Back alignment and structure |
|---|
Probab=98.82 E-value=5.8e-09 Score=112.63 Aligned_cols=97 Identities=12% Similarity=0.040 Sum_probs=69.2
Q ss_pred HHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCCh--hhHHhhhHHHHHHHHHhh-cCCCCCcEEEEEE
Q 012210 175 QNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDF--DHYLEEDVPAAMEYIRAQ-SKPKDGKLLAIGH 251 (468)
Q Consensus 175 ~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~--~~~~~~D~~a~i~~l~~~-~~~~~~~v~lvGh 251 (468)
+.|+ .+||.|+++|++|+++....... . .... -+|.- .... +|+.++++++..+ ..++ ++|+++||
T Consensus 96 ~~la---~~GyaVv~~D~RG~g~S~g~~~~-~---~~~~--~~~~~~g~~~~-~D~~~~i~~l~~~~~~~d-~rvgl~G~ 164 (652)
T 2b9v_A 96 DVFV---EGGYIRVFQDIRGKYGSQGDYVM-T---RPPH--GPLNPTKTDET-TDAWDTVDWLVHNVPESN-GRVGMTGS 164 (652)
T ss_dssp HHHH---HTTCEEEEEECTTSTTCCSCCCT-T---CCCS--BTTBCSSCCHH-HHHHHHHHHHHHSCTTEE-EEEEEEEE
T ss_pred HHHH---hCCCEEEEEecCcCCCCCCcccc-c---cccc--ccccccccchh-hHHHHHHHHHHhcCCCCC-CCEEEEec
Confidence 6777 89999999999998763211100 0 0000 01110 1233 9999999999887 4333 59999999
Q ss_pred ehhHHHHHHHHHhcCCCCCcccccceeEEccccccC
Q 012210 252 SMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYT 287 (468)
Q Consensus 252 S~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~ 287 (468)
|+||.+++.+|+.+ +++++++|.+++..+..
T Consensus 165 SyGG~~al~~a~~~-----~~~lka~v~~~~~~d~~ 195 (652)
T 2b9v_A 165 SYEGFTVVMALLDP-----HPALKVAAPESPMVDGW 195 (652)
T ss_dssp EHHHHHHHHHHTSC-----CTTEEEEEEEEECCCTT
T ss_pred CHHHHHHHHHHhcC-----CCceEEEEecccccccc
Confidence 99999999999865 88999999999887743
|
| >1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A* | Back alignment and structure |
|---|
Probab=98.69 E-value=1.9e-07 Score=89.51 Aligned_cols=93 Identities=15% Similarity=0.161 Sum_probs=58.3
Q ss_pred hcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHH
Q 012210 182 EEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAM 261 (468)
Q Consensus 182 ~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~ 261 (468)
..||.|++||..+... +......-...+. ...+.+.++..+|+..+++. +.+...++++++||||||.+++.+
T Consensus 59 ~~~~~vv~pd~~~~~~-~~~~~~~~~~~g~---~~~~~~~~~~~~~l~~~i~~---~~~~~~~~~~l~G~S~GG~~al~~ 131 (280)
T 1dqz_A 59 QSGLSVIMPVGGQSSF-YTDWYQPSQSNGQ---NYTYKWETFLTREMPAWLQA---NKGVSPTGNAAVGLSMSGGSALIL 131 (280)
T ss_dssp TSSSEEEEECCCTTCT-TSBCSSSCTTTTC---CSCCBHHHHHHTHHHHHHHH---HHCCCSSSCEEEEETHHHHHHHHH
T ss_pred cCCeEEEEECCCCCcc-ccCCCCCCccccc---cccccHHHHHHHHHHHHHHH---HcCCCCCceEEEEECHHHHHHHHH
Confidence 6899999999753211 1100000000000 01223445444666666654 233333489999999999999999
Q ss_pred HHhcCCCCCcccccceeEEcccccc
Q 012210 262 LSRCGFEGRESRLAAIVTLASSLDY 286 (468)
Q Consensus 262 a~~~~~~~~p~~V~~lVllap~~~~ 286 (468)
|.++ |+.+.++|++++....
T Consensus 132 a~~~-----p~~~~~~v~~sg~~~~ 151 (280)
T 1dqz_A 132 AAYY-----PQQFPYAASLSGFLNP 151 (280)
T ss_dssp HHHC-----TTTCSEEEEESCCCCT
T ss_pred HHhC-----CchheEEEEecCcccc
Confidence 9998 8999999999887654
|
| >1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=98.68 E-value=1.2e-07 Score=92.21 Aligned_cols=98 Identities=11% Similarity=0.017 Sum_probs=60.6
Q ss_pred HHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEeh
Q 012210 174 SQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSM 253 (468)
Q Consensus 174 a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~ 253 (468)
.+.++ ..||.|++||..+... |..... - ...... ...+.+.++..+|+...++. +.+...++++|+||||
T Consensus 59 ~~~~~---~~~~~vv~p~~~~~~~-~~~~~~-~-~~~~g~-~~~~~~~~~~~~~l~~~i~~---~~~~~~~~~~l~G~S~ 128 (304)
T 1sfr_A 59 FEWYD---QSGLSVVMPVGGQSSF-YSDWYQ-P-ACGKAG-CQTYKWETFLTSELPGWLQA---NRHVKPTGSAVVGLSM 128 (304)
T ss_dssp HHHHT---TSSCEEEEECCCTTCT-TCBCSS-C-EEETTE-EECCBHHHHHHTHHHHHHHH---HHCBCSSSEEEEEETH
T ss_pred HHHHh---cCCeEEEEECCCCCcc-ccccCC-c-cccccc-cccccHHHHHHHHHHHHHHH---HCCCCCCceEEEEECH
Confidence 34455 6899999999854311 110000 0 000000 01234555544666666554 3333334899999999
Q ss_pred hHHHHHHHHHhcCCCCCcccccceeEEcccccc
Q 012210 254 GGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 286 (468)
Q Consensus 254 GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~ 286 (468)
||.+++.++.++ |++++++|++++....
T Consensus 129 GG~~al~~a~~~-----p~~~~~~v~~sg~~~~ 156 (304)
T 1sfr_A 129 AASSALTLAIYH-----PQQFVYAGAMSGLLDP 156 (304)
T ss_dssp HHHHHHHHHHHC-----TTTEEEEEEESCCSCT
T ss_pred HHHHHHHHHHhC-----ccceeEEEEECCccCc
Confidence 999999999998 8899999999886653
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=8.8e-08 Score=93.61 Aligned_cols=90 Identities=16% Similarity=0.048 Sum_probs=67.1
Q ss_pred chh-hHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEE
Q 012210 169 QIR-DLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLL 247 (468)
Q Consensus 169 ~i~-~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~ 247 (468)
.+. .+++.|+ .+||.|+++|+.+++.. +..... +++.+.++.+....+.. +++
T Consensus 81 ~w~~~l~~~L~---~~Gy~V~a~DlpG~G~~--------------------~~~~~~-~~la~~I~~l~~~~g~~--~v~ 134 (316)
T 3icv_A 81 SFDSNWIPLSA---QLGYTPCWISPPPFMLN--------------------DTQVNT-EYMVNAITTLYAGSGNN--KLP 134 (316)
T ss_dssp HHTTTHHHHHH---HTTCEEEEECCTTTTCS--------------------CHHHHH-HHHHHHHHHHHHHTTSC--CEE
T ss_pred HHHHHHHHHHH---HCCCeEEEecCCCCCCC--------------------cHHHHH-HHHHHHHHHHHHHhCCC--ceE
Confidence 344 6788888 88999999999887431 122233 77788888888777655 999
Q ss_pred EEEEehhHHHHHHHHHhcCCCCCcccccceeEEcccccc
Q 012210 248 AIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 286 (468)
Q Consensus 248 lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~ 286 (468)
||||||||.++..++..++. .+++|+++|+++++..-
T Consensus 135 LVGHSmGGlvA~~al~~~p~--~~~~V~~lV~lapp~~G 171 (316)
T 3icv_A 135 VLTWSQGGLVAQWGLTFFPS--IRSKVDRLMAFAPDYKG 171 (316)
T ss_dssp EEEETHHHHHHHHHHHHCGG--GTTTEEEEEEESCCTTC
T ss_pred EEEECHHHHHHHHHHHhccc--cchhhceEEEECCCCCC
Confidence 99999999999777665410 15789999999987653
|
| >1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=98.58 E-value=6.7e-07 Score=85.94 Aligned_cols=92 Identities=16% Similarity=0.165 Sum_probs=60.1
Q ss_pred HHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEe
Q 012210 173 LSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHS 252 (468)
Q Consensus 173 ~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS 252 (468)
+.+.++ ..||.|++||..+... +. ... .... -.+.++..+|+..+++. +.+.+.++++++|||
T Consensus 58 ~~~~~~---~~~~~vv~pd~~~~~~-~~-~~~---~~~~------~~~~~~~~~~l~~~i~~---~~~~~~~~~~l~G~S 120 (280)
T 1r88_A 58 AMNTLA---GKGISVVAPAGGAYSM-YT-NWE---QDGS------KQWDTFLSAELPDWLAA---NRGLAPGGHAAVGAA 120 (280)
T ss_dssp HHHHHT---TSSSEEEEECCCTTST-TS-BCS---SCTT------CBHHHHHHTHHHHHHHH---HSCCCSSCEEEEEET
T ss_pred HHHHHh---cCCeEEEEECCCCCCc-cC-CCC---CCCC------CcHHHHHHHHHHHHHHH---HCCCCCCceEEEEEC
Confidence 455566 7899999999843211 10 000 0000 02333334666666554 344433589999999
Q ss_pred hhHHHHHHHHHhcCCCCCcccccceeEEcccccc
Q 012210 253 MGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 286 (468)
Q Consensus 253 ~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~ 286 (468)
|||.+++.+|.++ |++++++|++++....
T Consensus 121 ~GG~~al~~a~~~-----p~~~~~~v~~sg~~~~ 149 (280)
T 1r88_A 121 QGGYGAMALAAFH-----PDRFGFAGSMSGFLYP 149 (280)
T ss_dssp HHHHHHHHHHHHC-----TTTEEEEEEESCCCCT
T ss_pred HHHHHHHHHHHhC-----ccceeEEEEECCccCc
Confidence 9999999999998 8899999999887653
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 | Back alignment and structure |
|---|
Probab=98.55 E-value=7.3e-08 Score=93.22 Aligned_cols=85 Identities=15% Similarity=0.166 Sum_probs=65.0
Q ss_pred cchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEE
Q 012210 168 IQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLL 247 (468)
Q Consensus 168 ~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~ 247 (468)
.++..+++.|+ .+||.|+++|+.+++.. + .+.+++. +|+.++++.+ +.. +++
T Consensus 26 ~~~~~~~~~L~---~~G~~v~~~d~~g~g~s-----~-------------~~~~~~~-~~i~~~~~~~----~~~--~v~ 77 (285)
T 1ex9_A 26 DYWFGIPSALR---RDGAQVYVTEVSQLDTS-----E-------------VRGEQLL-QQVEEIVALS----GQP--KVN 77 (285)
T ss_dssp ESSTTHHHHHH---HTTCCEEEECCCSSSCH-----H-------------HHHHHHH-HHHHHHHHHH----CCS--CEE
T ss_pred ccHHHHHHHHH---hCCCEEEEEeCCCCCCc-----h-------------hhHHHHH-HHHHHHHHHh----CCC--CEE
Confidence 37788899998 89999999999887541 0 1233443 5666655554 333 999
Q ss_pred EEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccc
Q 012210 248 AIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 248 lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
+|||||||.++..++..+ +++|+++|+++++..
T Consensus 78 lvGhS~GG~~a~~~a~~~-----p~~v~~lv~i~~p~~ 110 (285)
T 1ex9_A 78 LIGHSHGGPTIRYVAAVR-----PDLIASATSVGAPHK 110 (285)
T ss_dssp EEEETTHHHHHHHHHHHC-----GGGEEEEEEESCCTT
T ss_pred EEEECHhHHHHHHHHHhC-----hhheeEEEEECCCCC
Confidence 999999999999999986 889999999998543
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
Probab=98.54 E-value=6.5e-08 Score=97.82 Aligned_cols=102 Identities=17% Similarity=0.208 Sum_probs=71.6
Q ss_pred hHHHHHHhhhhcCceEeccCccccccCCccch---------HHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCC
Q 012210 172 DLSQNLVNMIEEGQLSVSPQLFDLQERLFSTI---------DDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPK 242 (468)
Q Consensus 172 ~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~---------~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~ 242 (468)
.+++.|+ .+||.|+++|+++++....... ..+... ......++..+...|+.++++++..+...+
T Consensus 150 ~~a~~la---~~G~~Vl~~D~rg~G~s~~~~~~~~~~~~~~~~~~~~---~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd 223 (391)
T 3g8y_A 150 SMALNMV---KEGYVAVAVDNAAAGEASDLECYDKGWNYDYDVVSRF---LLELGWSWLGYTSYLDMQVLNWMKAQSYIR 223 (391)
T ss_dssp CHHHHHH---TTTCEEEECCCTTSGGGCSSGGGTTTTSCCHHHHHHH---HHHTTCCHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred HHHHHHH---HCCCEEEEecCCCccccCCcccccccccchHHHHHHH---HHhcCCCHHHHHHHHHHHHHHHHHhccCCC
Confidence 6888999 9999999999999876432110 000000 000011222223489999999999876555
Q ss_pred CCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccc
Q 012210 243 DGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 243 ~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
.++|+++||||||.+++.+|+. +++|+++|+.++...
T Consensus 224 ~~rI~v~G~S~GG~~al~~a~~------~~~i~a~v~~~~~~~ 260 (391)
T 3g8y_A 224 KDRIVISGFSLGTEPMMVLGVL------DKDIYAFVYNDFLCQ 260 (391)
T ss_dssp EEEEEEEEEGGGHHHHHHHHHH------CTTCCEEEEESCBCC
T ss_pred CCeEEEEEEChhHHHHHHHHHc------CCceeEEEEccCCCC
Confidence 5689999999999999999887 788999998876544
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E | Back alignment and structure |
|---|
Probab=98.54 E-value=1.2e-07 Score=93.20 Aligned_cols=88 Identities=16% Similarity=0.149 Sum_probs=66.6
Q ss_pred cchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEE
Q 012210 168 IQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLL 247 (468)
Q Consensus 168 ~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~ 247 (468)
.+++.+++.|+ .+||.|+++|+.+++..-. ...+.+++. +|+.++++.+ +.. +++
T Consensus 28 ~~w~~l~~~L~---~~G~~V~~~d~~g~g~s~~---------------~~~~~~~l~-~~i~~~l~~~----~~~--~v~ 82 (320)
T 1ys1_X 28 EYWYGIQEDLQ---QRGATVYVANLSGFQSDDG---------------PNGRGEQLL-AYVKTVLAAT----GAT--KVN 82 (320)
T ss_dssp ESSTTHHHHHH---HTTCCEEECCCCSSCCSSS---------------TTSHHHHHH-HHHHHHHHHH----CCS--CEE
T ss_pred HHHHHHHHHHH---hCCCEEEEEcCCCCCCCCC---------------CCCCHHHHH-HHHHHHHHHh----CCC--CEE
Confidence 66788999999 8999999999998755210 011334444 5666555554 333 999
Q ss_pred EEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccc
Q 012210 248 AIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 248 lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
+|||||||.++..++..+ +++|+++|+++++..
T Consensus 83 lvGHS~GG~va~~~a~~~-----p~~V~~lV~i~~p~~ 115 (320)
T 1ys1_X 83 LVGHSQGGLTSRYVAAVA-----PDLVASVTTIGTPHR 115 (320)
T ss_dssp EEEETHHHHHHHHHHHHC-----GGGEEEEEEESCCTT
T ss_pred EEEECHhHHHHHHHHHhC-----hhhceEEEEECCCCC
Confidence 999999999999999987 889999999998544
|
| >1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A* | Back alignment and structure |
|---|
Probab=98.51 E-value=8.8e-08 Score=98.78 Aligned_cols=92 Identities=11% Similarity=0.107 Sum_probs=69.2
Q ss_pred HHHHHHhhhh-cCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEE
Q 012210 173 LSQNLVNMIE-EGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGH 251 (468)
Q Consensus 173 ~a~~la~~l~-~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGh 251 (468)
+++.|. . .||+|+++|+.+++... ... ..++...++ +|+.+++++|....+...++++|+||
T Consensus 91 l~~~l~---~~~~~~Vi~~D~~G~G~S~--~~~-----------~~~~~~~~~-~dl~~li~~L~~~~g~~~~~i~LvGh 153 (452)
T 1bu8_A 91 MCKKMF---QVEKVNCICVDWRRGSRTE--YTQ-----------ASYNTRVVG-AEIAFLVQVLSTEMGYSPENVHLIGH 153 (452)
T ss_dssp HHHHHH---TTCCEEEEEEECHHHHSSC--HHH-----------HHHHHHHHH-HHHHHHHHHHHHHHCCCGGGEEEEEE
T ss_pred HHHHHH---hhCCCEEEEEechhcccCc--hhH-----------hHhhHHHHH-HHHHHHHHHHHHhcCCCccceEEEEE
Confidence 556665 4 39999999999986531 000 011344565 89999999997655543359999999
Q ss_pred ehhHHHHHHHHHhcCCCCCcccccceeEEcccccc
Q 012210 252 SMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 286 (468)
Q Consensus 252 S~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~ 286 (468)
||||.+|+.+|.++ |++|.++|+++|+.+.
T Consensus 154 SlGg~vA~~~a~~~-----p~~v~~iv~ldpa~p~ 183 (452)
T 1bu8_A 154 SLGAHVVGEAGRRL-----EGHVGRITGLDPAEPC 183 (452)
T ss_dssp THHHHHHHHHHHHT-----TTCSSEEEEESCBCTT
T ss_pred ChhHHHHHHHHHhc-----ccccceEEEecCCccc
Confidence 99999999999997 8899999999886553
|
| >1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus} | Back alignment and structure |
|---|
Probab=98.51 E-value=9.7e-08 Score=98.47 Aligned_cols=108 Identities=9% Similarity=0.012 Sum_probs=75.2
Q ss_pred ccccccccccc-cchhh-HHHHHHhhhhc-CceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHH
Q 012210 157 LLERRQSSAIA-IQIRD-LSQNLVNMIEE-GQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAME 233 (468)
Q Consensus 157 ll~~~~~~G~~-~~i~~-~a~~la~~l~~-Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~ 233 (468)
++-.|++.+-. ..+.. +++.|+ .. ||+|+++|+.+++... ... . .++...++ +|+.++++
T Consensus 73 vvliHG~~~~~~~~w~~~~~~~l~---~~~~~~Vi~~D~~g~G~S~--~~~----~-------~~~~~~~~-~dl~~~i~ 135 (452)
T 1w52_X 73 HFVIHGFRDRGEDSWPSDMCKKIL---QVETTNCISVDWSSGAKAE--YTQ----A-------VQNIRIVG-AETAYLIQ 135 (452)
T ss_dssp EEEECCTTCCSSSSHHHHHHHHHH---TTSCCEEEEEECHHHHTSC--HHH----H-------HHHHHHHH-HHHHHHHH
T ss_pred EEEEcCCCCCCCchHHHHHHHHHH---hhCCCEEEEEecccccccc--cHH----H-------HHhHHHHH-HHHHHHHH
Confidence 44434444333 22333 566665 54 9999999999986531 000 0 11345565 89999999
Q ss_pred HHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcccccc
Q 012210 234 YIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 286 (468)
Q Consensus 234 ~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~ 286 (468)
++....+...++++++||||||.+|..+|.++ |++|.++|+++|+.+.
T Consensus 136 ~L~~~~g~~~~~i~LvGhSlGg~vA~~~a~~~-----p~~v~~iv~ldpa~p~ 183 (452)
T 1w52_X 136 QLLTELSYNPENVHIIGHSLGAHTAGEAGRRL-----EGRVGRVTGLDPAEPC 183 (452)
T ss_dssp HHHHHHCCCGGGEEEEEETHHHHHHHHHHHHT-----TTCSSEEEEESCBCTT
T ss_pred HHHHhcCCCcccEEEEEeCHHHHHHHHHHHhc-----ccceeeEEeccccccc
Confidence 99765553334999999999999999999987 8899999999886543
|
| >1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A | Back alignment and structure |
|---|
Probab=98.50 E-value=2.5e-07 Score=94.95 Aligned_cols=109 Identities=11% Similarity=0.036 Sum_probs=76.6
Q ss_pred ccccccccccc-cchhh-HHHHHHhhhh-cCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHH
Q 012210 157 LLERRQSSAIA-IQIRD-LSQNLVNMIE-EGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAME 233 (468)
Q Consensus 157 ll~~~~~~G~~-~~i~~-~a~~la~~l~-~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~ 233 (468)
++-.|++.|-. ..+.. +++.|+ . .||.|+++|+.+++... ... . .++...+. +|+.++++
T Consensus 73 vvllHG~~~s~~~~w~~~~~~~l~---~~~~~~Vi~~D~~g~g~s~--~~~----~-------~~~~~~~~-~dl~~~i~ 135 (432)
T 1gpl_A 73 RFIIHGFTDSGENSWLSDMCKNMF---QVEKVNCICVDWKGGSKAQ--YSQ----A-------SQNIRVVG-AEVAYLVQ 135 (432)
T ss_dssp EEEECCTTCCTTSHHHHHHHHHHH---HHCCEEEEEEECHHHHTSC--HHH----H-------HHHHHHHH-HHHHHHHH
T ss_pred EEEECCCCCCCCchHHHHHHHHHH---hcCCcEEEEEECccccCcc--chh----h-------HhhHHHHH-HHHHHHHH
Confidence 44434444333 23333 666666 5 79999999999886532 100 0 11244555 89999999
Q ss_pred HHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccC
Q 012210 234 YIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYT 287 (468)
Q Consensus 234 ~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~ 287 (468)
++..+.+...++++++||||||.+++.+|.++ |++|.++++++|..++.
T Consensus 136 ~l~~~~g~~~~~i~lvGhSlGg~vA~~~a~~~-----p~~v~~iv~l~pa~p~~ 184 (432)
T 1gpl_A 136 VLSTSLNYAPENVHIIGHSLGAHTAGEAGKRL-----NGLVGRITGLDPAEPYF 184 (432)
T ss_dssp HHHHHHCCCGGGEEEEEETHHHHHHHHHHHTT-----TTCSSEEEEESCBCTTT
T ss_pred HHHHhcCCCcccEEEEEeCHHHHHHHHHHHhc-----ccccceeEEeccccccc
Confidence 99876664345999999999999999999887 78899999998866543
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.42 E-value=2.6e-07 Score=93.69 Aligned_cols=100 Identities=14% Similarity=0.185 Sum_probs=69.8
Q ss_pred hHHHHHHhhhhcCceEeccCccccccCCccchH---------HHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCC
Q 012210 172 DLSQNLVNMIEEGQLSVSPQLFDLQERLFSTID---------DFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPK 242 (468)
Q Consensus 172 ~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~---------~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~ 242 (468)
.+++.|+ .+||.|+++|+++++........ .+... .......+..+...|+.+++++|..+...+
T Consensus 155 ~~a~~la---~~Gy~Vl~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~---~~~~g~~~~~~~~~D~~~ald~l~~~~~vd 228 (398)
T 3nuz_A 155 TQALNFV---KEGYIAVAVDNPAAGEASDLERYTLGSNYDYDVVSRY---LLELGWSYLGYASYLDMQVLNWMKTQKHIR 228 (398)
T ss_dssp CHHHHHH---TTTCEEEEECCTTSGGGCSSGGGTTTTSCCHHHHHHH---HHHTTCCHHHHHHHHHHHHHHHHTTCSSEE
T ss_pred HHHHHHH---HCCCEEEEecCCCCCccccccccccccccchhhhhhH---HhhcCCCHHHHHHHHHHHHHHHHHhCCCCC
Confidence 6888999 99999999999998764321100 00000 000111222333489999999998876554
Q ss_pred CCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccc
Q 012210 243 DGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASS 283 (468)
Q Consensus 243 ~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~ 283 (468)
.++|+++||||||.+++.+++. +++|+++|..++.
T Consensus 229 ~~rI~v~G~S~GG~~a~~~aa~------~~~i~a~v~~~~~ 263 (398)
T 3nuz_A 229 KDRIVVSGFSLGTEPMMVLGTL------DTSIYAFVYNDFL 263 (398)
T ss_dssp EEEEEEEEEGGGHHHHHHHHHH------CTTCCEEEEESCB
T ss_pred CCeEEEEEECHhHHHHHHHHhc------CCcEEEEEEeccc
Confidence 4689999999999999988887 7889999887553
|
| >1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A* | Back alignment and structure |
|---|
Probab=98.39 E-value=5.6e-06 Score=80.26 Aligned_cols=91 Identities=14% Similarity=0.237 Sum_probs=60.2
Q ss_pred cchhhHHHHHHhhhhcC----ceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcC---
Q 012210 168 IQIRDLSQNLVNMIEEG----QLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSK--- 240 (468)
Q Consensus 168 ~~i~~~a~~la~~l~~G----y~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~--- 240 (468)
..+..++++|+ .+| |.|++||.++... . ...+.+...+|+...++.......
T Consensus 90 ~~~~~~~~~l~---~~g~~~~~ivv~pd~~~~~~-----------~-------~~~~~~~~~~~l~~~i~~~~~~~~~~~ 148 (297)
T 1gkl_A 90 VKLQNILDHAI---MNGELEPLIVVTPTFNGGNC-----------T-------AQNFYQEFRQNVIPFVESKYSTYAEST 148 (297)
T ss_dssp TCHHHHHHHHH---HTTSSCCEEEEECCSCSTTC-----------C-------TTTHHHHHHHTHHHHHHHHSCSSCSSC
T ss_pred chHHHHHHHHH---HcCCCCCEEEEEecCcCCcc-----------c-------hHHHHHHHHHHHHHHHHHhCCcccccc
Confidence 34667777777 664 9999999765311 0 011223333666655554321110
Q ss_pred ------CCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcccc
Q 012210 241 ------PKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSL 284 (468)
Q Consensus 241 ------~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~ 284 (468)
.+..+++++||||||.+++.++.++ |+.+++++++++..
T Consensus 149 ~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~-----p~~f~~~v~~sg~~ 193 (297)
T 1gkl_A 149 TPQGIAASRMHRGFGGFAMGGLTTWYVMVNC-----LDYVAYFMPLSGDY 193 (297)
T ss_dssp SHHHHHTTGGGEEEEEETHHHHHHHHHHHHH-----TTTCCEEEEESCCC
T ss_pred ccccccCCccceEEEEECHHHHHHHHHHHhC-----chhhheeeEecccc
Confidence 1224799999999999999999987 88999999998854
|
| >2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A | Back alignment and structure |
|---|
Probab=98.37 E-value=5.3e-07 Score=89.38 Aligned_cols=94 Identities=15% Similarity=0.168 Sum_probs=69.4
Q ss_pred hhHHHHHHhhhhcCce---EeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEE
Q 012210 171 RDLSQNLVNMIEEGQL---SVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLL 247 (468)
Q Consensus 171 ~~~a~~la~~l~~Gy~---viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~ 247 (468)
+.+++.|+ .+||. |+++|+.+++..-. . . ........ .+++.+.++.+....+.. +++
T Consensus 71 ~~l~~~L~---~~Gy~~~~V~~~D~~g~G~S~~---~-----~-----~~~~~~~~-~~~l~~~I~~l~~~~g~~--~v~ 131 (342)
T 2x5x_A 71 RSVYAELK---ARGYNDCEIFGVTYLSSSEQGS---A-----Q-----YNYHSSTK-YAIIKTFIDKVKAYTGKS--QVD 131 (342)
T ss_dssp SCHHHHHH---HTTCCTTSEEEECCSCHHHHTC---G-----G-----GCCBCHHH-HHHHHHHHHHHHHHHTCS--CEE
T ss_pred HHHHHHHH---hCCCCCCeEEEEeCCCCCccCC---c-----c-----ccCCHHHH-HHHHHHHHHHHHHHhCCC--CEE
Confidence 77888888 89998 99999988754100 0 0 00012233 378888888887776655 999
Q ss_pred EEEEehhHHHHHHHHHhcCCCCCcccccceeEEcccccc
Q 012210 248 AIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 286 (468)
Q Consensus 248 lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~ 286 (468)
+|||||||.++..++.++. .+++|+++|+++++...
T Consensus 132 LVGHSmGG~iA~~~a~~~~---~p~~V~~lVlla~p~~G 167 (342)
T 2x5x_A 132 IVAHSMGVSMSLATLQYYN---NWTSVRKFINLAGGIRG 167 (342)
T ss_dssp EEEETHHHHHHHHHHHHHT---CGGGEEEEEEESCCTTC
T ss_pred EEEECHHHHHHHHHHHHcC---chhhhcEEEEECCCccc
Confidence 9999999999999998852 26789999999987654
|
| >1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19 | Back alignment and structure |
|---|
Probab=98.37 E-value=3e-07 Score=94.51 Aligned_cols=93 Identities=13% Similarity=0.069 Sum_probs=67.3
Q ss_pred HHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEe
Q 012210 173 LSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHS 252 (468)
Q Consensus 173 ~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS 252 (468)
++..|. ...+|+|+++|+.+++... ... . .++...+. +++.++++++....+...+++++||||
T Consensus 90 l~~~ll--~~~~~~VI~vD~~g~g~s~--y~~----~-------~~~~~~v~-~~la~ll~~L~~~~g~~~~~v~LIGhS 153 (449)
T 1hpl_A 90 MCQNMF--KVESVNCICVDWKSGSRTA--YSQ----A-------SQNVRIVG-AEVAYLVGVLQSSFDYSPSNVHIIGHS 153 (449)
T ss_dssp HHHHHH--HHCCEEEEEEECHHHHSSC--HHH----H-------HHHHHHHH-HHHHHHHHHHHHHHCCCGGGEEEEEET
T ss_pred HHHHHH--hcCCeEEEEEeCCcccCCc--cHH----H-------HHHHHHHH-HHHHHHHHHHHHhcCCCcccEEEEEEC
Confidence 555542 0468999999999886521 000 0 11344555 888999999975544333599999999
Q ss_pred hhHHHHHHHHHhcCCCCCcccccceeEEcccccc
Q 012210 253 MGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 286 (468)
Q Consensus 253 ~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~ 286 (468)
|||.+|..+|.++ +.+|.++|+++|..+.
T Consensus 154 lGg~vA~~~a~~~-----p~~v~~iv~Ldpa~p~ 182 (449)
T 1hpl_A 154 LGSHAAGEAGRRT-----NGAVGRITGLDPAEPC 182 (449)
T ss_dssp HHHHHHHHHHHHT-----TTCSSEEEEESCBCTT
T ss_pred HhHHHHHHHHHhc-----chhcceeeccCccccc
Confidence 9999999999997 7889999999886643
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=98.36 E-value=1.6e-06 Score=85.12 Aligned_cols=50 Identities=18% Similarity=0.148 Sum_probs=39.3
Q ss_pred Ccc-CccEEEEecCCCCcCCHHHHHHHHHhCCCC----ceeEEEecCCCCCCCCccc
Q 012210 391 HKC-NIPILAIAGDQDLICPPEAVEETVKLLPED----LVTYKVFGEPSGPHYAHYD 442 (468)
Q Consensus 391 ~~I-~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~----~~~~~v~~~~~agH~~H~e 442 (468)
.++ ..|+|++||++|.+||++.++++++.+... .++++.+ ++++|....+
T Consensus 86 ~~l~~~Pvli~HG~~D~vVP~~~s~~~~~~L~~~g~~~~ve~~~~--~g~gH~~~~~ 140 (318)
T 2d81_A 86 ANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTT--TGAVHTFPTD 140 (318)
T ss_dssp GGGGGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEE--TTCCSSEEES
T ss_pred HcCCCCcEEEEeCCCCCCcCHHHHHHHHHHHHhcCCCcceEEEEe--CCCCCCCccC
Confidence 344 369999999999999999999999887643 3577777 8889975443
|
| >2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=98.36 E-value=8.2e-07 Score=85.03 Aligned_cols=50 Identities=18% Similarity=0.264 Sum_probs=39.5
Q ss_pred HHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcccc
Q 012210 230 AAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSL 284 (468)
Q Consensus 230 a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~ 284 (468)
.++.++..+.+.+..+++++||||||.+++.++.++ |+.++++++++|..
T Consensus 138 ~l~~~i~~~~~~~~~~~~~~G~S~GG~~a~~~~~~~-----p~~f~~~~~~s~~~ 187 (275)
T 2qm0_A 138 ELKPQIEKNFEIDKGKQTLFGHXLGGLFALHILFTN-----LNAFQNYFISSPSI 187 (275)
T ss_dssp THHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHC-----GGGCSEEEEESCCT
T ss_pred HHHHHHHhhccCCCCCCEEEEecchhHHHHHHHHhC-----chhhceeEEeCcee
Confidence 345556665554335899999999999999999987 88899999988753
|
| >2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=7.1e-07 Score=91.84 Aligned_cols=118 Identities=14% Similarity=0.146 Sum_probs=77.0
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCc---eEeccCccccccC--------CccchHHHhhc-ccce-------Eeec
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQ---LSVSPQLFDLQER--------LFSTIDDFQKQ-LDLI-------VQYD 217 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy---~viapdl~~~~~~--------~~~~~~~l~~~-~~~~-------~~~D 217 (468)
++-.|.+.+-...+..++..|+ .+|| .|+++|+.+++.. +.+........ ...+ ..+.
T Consensus 25 VVLlHG~g~s~~~w~~la~~La---~~Gy~~~~Via~DlpG~G~S~~~~~Dv~~~G~~~~~G~n~~p~id~~~l~~v~~~ 101 (484)
T 2zyr_A 25 VVFVHGLAGSAGQFESQGMRFA---ANGYPAEYVKTFEYDTISWALVVETDMLFSGLGSEFGLNISQIIDPETLDKILSK 101 (484)
T ss_dssp EEEECCTTCCGGGGHHHHHHHH---HTTCCGGGEEEECCCHHHHHHHTTTSTTTTTGGGHHHHHHGGGSCHHHHHHHHTS
T ss_pred EEEECCCCCCHHHHHHHHHHHH---HcCCCcceEEEEECCCCCccccccccccccccccccccccccccccccccccccc
Confidence 3444555555566777888888 8999 7999999998631 11111000000 0000 0000
Q ss_pred ---CChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCc---ccccceeEEccccc
Q 012210 218 ---WDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRE---SRLAAIVTLASSLD 285 (468)
Q Consensus 218 ---~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p---~~V~~lVllap~~~ 285 (468)
...... .+++.+.++.+....+.. +++++||||||.+++.++.++ | ++|+++|+++++..
T Consensus 102 ~~~~~~~~~-~~dla~~L~~ll~~lg~~--kV~LVGHSmGG~IAl~~A~~~-----Pe~~~~V~~LVlIapp~~ 167 (484)
T 2zyr_A 102 SRERLIDET-FSRLDRVIDEALAESGAD--KVDLVGHSMGTFFLVRYVNSS-----PERAAKVAHLILLDGVWG 167 (484)
T ss_dssp CHHHHHHHH-HHHHHHHHHHHHHHHCCS--CEEEEEETHHHHHHHHHHHTC-----HHHHHTEEEEEEESCCCS
T ss_pred cccCchhhh-HHHHHHHHHHHHHHhCCC--CEEEEEECHHHHHHHHHHHHC-----ccchhhhCEEEEECCccc
Confidence 012223 377777888887776665 999999999999999999986 5 58999999998765
|
| >1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A | Back alignment and structure |
|---|
Probab=98.31 E-value=5.2e-07 Score=92.75 Aligned_cols=84 Identities=15% Similarity=0.066 Sum_probs=62.1
Q ss_pred cCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHH
Q 012210 183 EGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAML 262 (468)
Q Consensus 183 ~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a 262 (468)
.||+|+++|+.+++..- ... ..++...++ +|+.++++++....+...++++||||||||.+|..+|
T Consensus 99 ~~~~VI~vD~~g~g~s~--y~~-----------~~~~~~~~a-~~l~~ll~~L~~~~g~~~~~v~LVGhSlGg~vA~~~a 164 (450)
T 1rp1_A 99 EEVNCICVDWKKGSQTS--YTQ-----------AANNVRVVG-AQVAQMLSMLSANYSYSPSQVQLIGHSLGAHVAGEAG 164 (450)
T ss_dssp CCEEEEEEECHHHHSSC--HHH-----------HHHHHHHHH-HHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHH
T ss_pred CCeEEEEEeCccccCCc--chH-----------HHHHHHHHH-HHHHHHHHHHHHhcCCChhhEEEEEECHhHHHHHHHH
Confidence 48999999998875410 000 011344555 8999999999755443335999999999999999999
Q ss_pred HhcCCCCCcccccceeEEcccccc
Q 012210 263 SRCGFEGRESRLAAIVTLASSLDY 286 (468)
Q Consensus 263 ~~~~~~~~p~~V~~lVllap~~~~ 286 (468)
.++ +. |.++++++|..+.
T Consensus 165 ~~~-----p~-v~~iv~Ldpa~p~ 182 (450)
T 1rp1_A 165 SRT-----PG-LGRITGLDPVEAS 182 (450)
T ss_dssp HTS-----TT-CCEEEEESCCCTT
T ss_pred Hhc-----CC-cccccccCccccc
Confidence 987 66 9999999886654
|
| >3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* | Back alignment and structure |
|---|
Probab=98.20 E-value=9.7e-06 Score=82.21 Aligned_cols=93 Identities=15% Similarity=0.216 Sum_probs=58.8
Q ss_pred hhhHHHHHHhhhhcCce----EeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCC--CC
Q 012210 170 IRDLSQNLVNMIEEGQL----SVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKP--KD 243 (468)
Q Consensus 170 i~~~a~~la~~l~~Gy~----viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~--~~ 243 (468)
+..+++.|+ .+|+. |+++|..+...+ ..++. ..-.+.++..+ +++.++..+.+. +.
T Consensus 214 ~~~~~~~l~---~~g~~~p~iVV~~d~~~~~~r----~~~~~--------~~~~~~~~l~~---el~~~i~~~~~~~~d~ 275 (403)
T 3c8d_A 214 VWPVLTSLT---HRQQLPPAVYVLIDAIDTTHR----AHELP--------CNADFWLAVQQ---ELLPLVKVIAPFSDRA 275 (403)
T ss_dssp CHHHHHHHH---HTTSSCSCEEEEECCCSHHHH----HHHSS--------SCHHHHHHHHH---THHHHHHHHSCCCCCG
T ss_pred HHHHHHHHH---HcCCCCCeEEEEECCCCCccc----cccCC--------ChHHHHHHHHH---HHHHHHHHHCCCCCCC
Confidence 344667777 78875 899887653211 00000 00012222223 345556555432 23
Q ss_pred CcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccc
Q 012210 244 GKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 244 ~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
.+++++||||||.+++.++.++ |+.+.+++++++...
T Consensus 276 ~~~~l~G~S~GG~~al~~a~~~-----p~~f~~~~~~sg~~~ 312 (403)
T 3c8d_A 276 DRTVVAGQSFGGLSALYAGLHW-----PERFGCVLSQSGSYW 312 (403)
T ss_dssp GGCEEEEETHHHHHHHHHHHHC-----TTTCCEEEEESCCTT
T ss_pred CceEEEEECHHHHHHHHHHHhC-----chhhcEEEEeccccc
Confidence 5899999999999999999987 888999999887653
|
| >3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.19 E-value=2.8e-06 Score=87.09 Aligned_cols=95 Identities=14% Similarity=0.115 Sum_probs=67.5
Q ss_pred cCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhc-CCCCCcEEEEEEehhHHHHHHH
Q 012210 183 EGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQS-KPKDGKLLAIGHSMGGILLYAM 261 (468)
Q Consensus 183 ~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~-~~~~~~v~lvGhS~GG~ia~~~ 261 (468)
.|+.|++.|.++++...+........ .... ..++.++++ +|+..++++++... .....+++++||||||++++.+
T Consensus 68 ~~~~Vi~~DhRg~G~S~p~~~~~~~~-~~~l--~~lt~~q~~-~Dl~~~~~~l~~~~~~~~~~p~il~GhS~GG~lA~~~ 143 (446)
T 3n2z_B 68 LKAMLVFAEHRYYGESLPFGDNSFKD-SRHL--NFLTSEQAL-ADFAELIKHLKRTIPGAENQPVIAIGGSYGGMLAAWF 143 (446)
T ss_dssp HTEEEEEECCTTSTTCCTTGGGGGSC-TTTS--TTCSHHHHH-HHHHHHHHHHHHHSTTGGGCCEEEEEETHHHHHHHHH
T ss_pred hCCcEEEEecCCCCCCCCCCcccccc-chhh--ccCCHHHHH-HHHHHHHHHHHHhcccCCCCCEEEEEeCHHHHHHHHH
Confidence 37899999999998753211100000 0000 012567776 99999999999863 2222489999999999999999
Q ss_pred HHhcCCCCCcccccceeEEcccccc
Q 012210 262 LSRCGFEGRESRLAAIVTLASSLDY 286 (468)
Q Consensus 262 a~~~~~~~~p~~V~~lVllap~~~~ 286 (468)
+.+| |+.|.++|+.+++...
T Consensus 144 ~~~y-----P~~v~g~i~ssapv~~ 163 (446)
T 3n2z_B 144 RMKY-----PHMVVGALAASAPIWQ 163 (446)
T ss_dssp HHHC-----TTTCSEEEEETCCTTC
T ss_pred HHhh-----hccccEEEEeccchhc
Confidence 9998 9999999998766543
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.10 E-value=3.1e-05 Score=75.41 Aligned_cols=95 Identities=13% Similarity=0.088 Sum_probs=56.9
Q ss_pred cccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHH
Q 012210 156 SLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYI 235 (468)
Q Consensus 156 ~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l 235 (468)
.++-.|.+.|....++.++..| . +.|++.|+.+ . . ...++++++ +++.+.++.+
T Consensus 48 ~l~~~hg~~g~~~~~~~~~~~l----~--~~v~~~~~~~--~-----------~------~~~~~~~~a-~~~~~~i~~~ 101 (316)
T 2px6_A 48 PLFLVHPIEGSTTVFHSLASRL----S--IPTYGLQCTR--A-----------A------PLDSIHSLA-AYYIDCIRQV 101 (316)
T ss_dssp CEEEECCTTCCSGGGHHHHHHC----S--SCEEEECCCT--T-----------S------CTTCHHHHH-HHHHHHHTTT
T ss_pred eEEEECCCCCCHHHHHHHHHhc----C--CCEEEEECCC--C-----------C------CcCCHHHHH-HHHHHHHHHh
Confidence 3555455555555555555443 2 7888877651 1 0 112455665 5555544332
Q ss_pred HhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCccc---ccceeEEccc
Q 012210 236 RAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESR---LAAIVTLASS 283 (468)
Q Consensus 236 ~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~---V~~lVllap~ 283 (468)
. . .++++++||||||.+++.+|.++... ..+ +.+++++++.
T Consensus 102 ~---~--~~~~~l~G~S~Gg~va~~~a~~l~~~--g~~~p~v~~l~li~~~ 145 (316)
T 2px6_A 102 Q---P--EGPYRVAGYSYGACVAFEMCSQLQAQ--QSPAPTHNSLFLFDGS 145 (316)
T ss_dssp C---S--SCCCEEEEETHHHHHHHHHHHHHHHH--C---CCCCEEEEESCS
T ss_pred C---C--CCCEEEEEECHHHHHHHHHHHHHHHc--CCcccccceEEEEcCC
Confidence 1 1 14899999999999999999875111 134 8889988764
|
| >2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus} | Back alignment and structure |
|---|
Probab=98.05 E-value=4.2e-07 Score=92.78 Aligned_cols=104 Identities=17% Similarity=0.239 Sum_probs=64.4
Q ss_pred hHHHHHHhhhhcCceEeccCccccccCCccchHHHh---hcccceE----eecCChhhHHhhhHHHHHHHHHhhcCCCCC
Q 012210 172 DLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQ---KQLDLIV----QYDWDFDHYLEEDVPAAMEYIRAQSKPKDG 244 (468)
Q Consensus 172 ~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~---~~~~~~~----~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~ 244 (468)
.+++.|+ .+||+|+++|+.+++..... ...+. ..+.... ...+++++++ +|+.++++.+.. ..
T Consensus 82 ~l~~~L~---~~Gy~Via~Dl~G~G~S~~~-~~~l~~~i~~g~g~sg~~~~~~~~~~~~a-~dl~~ll~~l~~-----~~ 151 (431)
T 2hih_A 82 NLRNHLR---KAGYETYEASVSALASNHER-AVELYYYLKGGRVDYGAAHSEKYGHERYG-KTYEGVLKDWKP-----GH 151 (431)
T ss_dssp CHHHHHH---HTTCCEEEECCCSSSCHHHH-HHHHHHHHHCEEEECCHHHHHHHTCCSEE-EEECCSCTTCBT-----TB
T ss_pred HHHHHHH---hCCCEEEEEcCCCCCCCccc-hHHhhhhhhhccccccccccccCCHHHHH-HHHHHHHHHhCC-----CC
Confidence 4888888 89999999999998653211 11111 0111000 0112344554 666665554421 13
Q ss_pred cEEEEEEehhHHHHHHHHHhcCC---------------------CCCcccccceeEEccccc
Q 012210 245 KLLAIGHSMGGILLYAMLSRCGF---------------------EGRESRLAAIVTLASSLD 285 (468)
Q Consensus 245 ~v~lvGhS~GG~ia~~~a~~~~~---------------------~~~p~~V~~lVllap~~~ 285 (468)
+++||||||||.++..+|..... .+.|++|.++|+++++..
T Consensus 152 kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~V~slv~i~tP~~ 213 (431)
T 2hih_A 152 PVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNMVTSITTIATPHN 213 (431)
T ss_dssp CEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSCEEEEEEESCCTT
T ss_pred CEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcccceeEEEEECCCCC
Confidence 89999999999999998875100 002678999999998653
|
| >2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A | Back alignment and structure |
|---|
Probab=97.92 E-value=1.9e-05 Score=79.38 Aligned_cols=103 Identities=18% Similarity=0.179 Sum_probs=56.5
Q ss_pred hHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCCh--------hhHHhhhHHHHHHHHHhhcCCCC
Q 012210 172 DLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDF--------DHYLEEDVPAAMEYIRAQSKPKD 243 (468)
Q Consensus 172 ~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~--------~~~~~~D~~a~i~~l~~~~~~~~ 243 (468)
.+++.|+ .+||+|+++|+.+++.... ....+...-. ....||.. ..+. +++.++++.+ .+.
T Consensus 35 ~la~~L~---~~G~~Via~Dl~g~G~s~~-~a~~l~~~i~-~~~vDy~~~~a~~~~~~~~~-~~l~~ll~~~---~~~-- 103 (387)
T 2dsn_A 35 DIEQWLN---DNGYRTYTLAVGPLSSNWD-RACEAYAQLV-GGTVDYGAAHAAKHGHARFG-RTYPGLLPEL---KRG-- 103 (387)
T ss_dssp CHHHHHH---HTTCCEEEECCCSSBCHHH-HHHHHHHHHH-CEEEECCHHHHHHHTSCSEE-EEECCSCGGG---GTT--
T ss_pred HHHHHHH---HCCCEEEEecCCCCCCccc-cHHHHHHHHH-hhhhhhhhhhhhhccchhhh-hhHHHHHHHh---cCC--
Confidence 5668888 8999999999998754211 0111100000 00001100 0011 1112222221 233
Q ss_pred CcEEEEEEehhHHHHHHHHHhcC--------------CCCCc------ccccceeEEccccc
Q 012210 244 GKLLAIGHSMGGILLYAMLSRCG--------------FEGRE------SRLAAIVTLASSLD 285 (468)
Q Consensus 244 ~~v~lvGhS~GG~ia~~~a~~~~--------------~~~~p------~~V~~lVllap~~~ 285 (468)
.++++|||||||.++..++..+. ....| ++|.++|+++++..
T Consensus 104 ~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~~~V~sLV~i~tP~~ 165 (387)
T 2dsn_A 104 GRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGHHFVLSVTTIATPHD 165 (387)
T ss_dssp CCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCEEEEEEESCCTT
T ss_pred CceEEEEECHHHHHHHHHHHHhccccccccccccccccccCccccccccceeEEEEECCCCC
Confidence 39999999999999999997310 00013 68999999998654
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 | Back alignment and structure |
|---|
Probab=97.87 E-value=6.9e-06 Score=69.02 Aligned_cols=62 Identities=10% Similarity=-0.141 Sum_probs=45.2
Q ss_pred hcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHH
Q 012210 182 EEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAM 261 (468)
Q Consensus 182 ~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~ 261 (468)
.++|.|+++|+.+++..-... . .+++++ +|+.++++.+. .+ +++++||||||.+++.+
T Consensus 40 ~~~~~v~~~d~~G~G~s~~~~--------------~-~~~~~~-~~~~~~~~~~~----~~--~~~lvG~S~Gg~~a~~~ 97 (131)
T 2dst_A 40 PEGYAFYLLDLPGYGRTEGPR--------------M-APEELA-HFVAGFAVMMN----LG--APWVLLRGLGLALGPHL 97 (131)
T ss_dssp CTTSEEEEECCTTSTTCCCCC--------------C-CHHHHH-HHHHHHHHHTT----CC--SCEEEECGGGGGGHHHH
T ss_pred hCCcEEEEECCCCCCCCCCCC--------------C-CHHHHH-HHHHHHHHHcC----CC--ccEEEEEChHHHHHHHH
Confidence 456999999999986521100 0 145555 77777777663 22 89999999999999999
Q ss_pred HHhc
Q 012210 262 LSRC 265 (468)
Q Consensus 262 a~~~ 265 (468)
|.++
T Consensus 98 a~~~ 101 (131)
T 2dst_A 98 EALG 101 (131)
T ss_dssp HHTT
T ss_pred HhcC
Confidence 9885
|
| >3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=97.75 E-value=0.00011 Score=72.52 Aligned_cols=49 Identities=24% Similarity=0.367 Sum_probs=38.3
Q ss_pred HHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcccc
Q 012210 230 AAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSL 284 (468)
Q Consensus 230 a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~ 284 (468)
.++.++..+..... ...++||||||..++.++.++ |+.+.+++.++|..
T Consensus 124 el~p~i~~~~~~~~-~r~i~G~S~GG~~al~~~~~~-----p~~F~~~~~~S~~~ 172 (331)
T 3gff_A 124 ELAPSIESQLRTNG-INVLVGHSFGGLVAMEALRTD-----RPLFSAYLALDTSL 172 (331)
T ss_dssp THHHHHHHHSCEEE-EEEEEEETHHHHHHHHHHHTT-----CSSCSEEEEESCCT
T ss_pred HHHHHHHHHCCCCC-CeEEEEECHHHHHHHHHHHhC-----chhhheeeEeCchh
Confidence 45556666655432 347999999999999999987 88999999998864
|
| >3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00034 Score=69.16 Aligned_cols=53 Identities=15% Similarity=0.082 Sum_probs=47.3
Q ss_pred hhHHHHHHHHHhhc--CCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcccc
Q 012210 226 EDVPAAMEYIRAQS--KPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSL 284 (468)
Q Consensus 226 ~D~~a~i~~l~~~~--~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~ 284 (468)
-|+..+|+||..+. .++..+|.++|||+||..++.+++. .++|+.+|..++..
T Consensus 165 Wg~~raid~L~~~~~~~VD~~RIgv~G~S~gG~~al~~aA~------D~Ri~~~v~~~~g~ 219 (375)
T 3pic_A 165 WGVSRVIDALELVPGARIDTTKIGVTGCSRNGKGAMVAGAF------EKRIVLTLPQESGA 219 (375)
T ss_dssp HHHHHHHHHHHHCGGGCEEEEEEEEEEETHHHHHHHHHHHH------CTTEEEEEEESCCT
T ss_pred HHHHHHHHHHHhCCccCcChhhEEEEEeCCccHHHHHHHhc------CCceEEEEeccCCC
Confidence 68999999999887 7777799999999999999999998 78999999987643
|
| >2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00014 Score=69.50 Aligned_cols=47 Identities=15% Similarity=0.155 Sum_probs=35.9
Q ss_pred HHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccc
Q 012210 231 AMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASS 283 (468)
Q Consensus 231 ~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~ 283 (468)
++.++..+.+.+.+++.++||||||.+++.++.+ |+.+.++++++|.
T Consensus 128 l~~~i~~~~~~~~~r~~i~G~S~GG~~a~~~~~~------p~~f~~~~~~s~~ 174 (278)
T 2gzs_A 128 IAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLS------SSYFRSYYSASPS 174 (278)
T ss_dssp HHHHHTTTSCEEEEEEEEEEETHHHHHHHHHHHH------CSSCSEEEEESGG
T ss_pred HHHHHHHhccCCCCceEEEEECHHHHHHHHHHhC------ccccCeEEEeCcc
Confidence 3444555555443479999999999999999986 6788999888774
|
| >4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00065 Score=68.06 Aligned_cols=54 Identities=17% Similarity=0.086 Sum_probs=47.9
Q ss_pred hhHHHHHHHHHh----hcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccc
Q 012210 226 EDVPAAMEYIRA----QSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 226 ~D~~a~i~~l~~----~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
-++..+++||.. +..++..+|.++|||+||..++.+++. .++|+.+|..++..+
T Consensus 197 Wg~~raiDyL~~~~~~~~~VD~~RIgv~G~S~gG~~Al~aaA~------D~Ri~~vi~~~sg~~ 254 (433)
T 4g4g_A 197 WGVDRLIDGLEQVGAQASGIDTKRLGVTGCSRNGKGAFITGAL------VDRIALTIPQESGAG 254 (433)
T ss_dssp HHHHHHHHHHHHHCHHHHCEEEEEEEEEEETHHHHHHHHHHHH------CTTCSEEEEESCCTT
T ss_pred HhHHHHHHHHHhccccCCCcChhHEEEEEeCCCcHHHHHHHhc------CCceEEEEEecCCCC
Confidence 699999999998 777777799999999999999999998 789999999876443
|
| >1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A* | Back alignment and structure |
|---|
Probab=96.44 E-value=0.0043 Score=58.97 Aligned_cols=43 Identities=16% Similarity=0.230 Sum_probs=35.3
Q ss_pred hhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhc
Q 012210 220 FDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRC 265 (468)
Q Consensus 220 ~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~ 265 (468)
+..+. +|+...++.++.+.+.. ++.++||||||.+|..++..+
T Consensus 117 ~~~~~-~~~~~~~~~~~~~~~~~--~i~l~GHSLGGalA~l~a~~l 159 (269)
T 1tib_A 117 WRSVA-DTLRQKVEDAVREHPDY--RVVFTGHSLGGALATVAGADL 159 (269)
T ss_dssp HHHHH-HHHHHHHHHHHHHCTTS--EEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHH-HHHHHHHHHHHHHCCCc--eEEEecCChHHHHHHHHHHHH
Confidence 34454 88888888888775543 899999999999999999986
|
| >4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A* | Back alignment and structure |
|---|
Probab=96.41 E-value=0.043 Score=52.88 Aligned_cols=63 Identities=14% Similarity=0.165 Sum_probs=40.9
Q ss_pred ChhhHHhhhHHHHHHHHHhh----cCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcccc
Q 012210 219 DFDHYLEEDVPAAMEYIRAQ----SKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSL 284 (468)
Q Consensus 219 ~~~~~~~~D~~a~i~~l~~~----~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~ 284 (468)
.+.+++.++++..|+.--.. .....++..|.||||||.-|+.+|.+++ .|....++...++..
T Consensus 124 ~~~~~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~al~~~---~~~~~~~~~s~s~~~ 190 (299)
T 4fol_A 124 QMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGYLKGY---SGKRYKSCSAFAPIV 190 (299)
T ss_dssp BHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHHHHTG---GGTCCSEEEEESCCC
T ss_pred cHHHHHHHHhHHHHHHhcccccccccccccceEEEecCchHHHHHHHHHhCC---CCCceEEEEeccccc
Confidence 46677778887777653311 0011246899999999999999999851 144566666655543
|
| >1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A | Back alignment and structure |
|---|
Probab=95.99 E-value=0.01 Score=56.35 Aligned_cols=38 Identities=21% Similarity=0.170 Sum_probs=29.2
Q ss_pred hhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhc
Q 012210 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRC 265 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~ 265 (468)
+++...++.+....+.. ++.++||||||.+|..+|...
T Consensus 120 ~~~~~~l~~~~~~~p~~--~i~~~GHSLGgalA~l~a~~l 157 (269)
T 1tgl_A 120 NELVATVLDQFKQYPSY--KVAVTGHSLGGATALLCALDL 157 (269)
T ss_pred HHHHHHHHHHHHHCCCc--eEEEEeeCHHHHHHHHHHHHH
Confidence 66666676666553332 799999999999999998874
|
| >1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A* | Back alignment and structure |
|---|
Probab=95.87 E-value=0.011 Score=55.78 Aligned_cols=54 Identities=15% Similarity=0.175 Sum_probs=38.2
Q ss_pred hhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcccc
Q 012210 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSL 284 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~ 284 (468)
+++...++.+..+.+.. ++.+.|||+||.+|..++..... ...+|. ++.+++|.
T Consensus 109 ~~~~~~l~~~~~~~p~~--~i~vtGHSLGGalA~l~a~~l~~--~~~~v~-~~tFg~Pr 162 (261)
T 1uwc_A 109 DQVESLVKQQASQYPDY--ALTVTGHSLGASMAALTAAQLSA--TYDNVR-LYTFGEPR 162 (261)
T ss_dssp HHHHHHHHHHHHHSTTS--EEEEEEETHHHHHHHHHHHHHHT--TCSSEE-EEEESCCC
T ss_pred HHHHHHHHHHHHHCCCc--eEEEEecCHHHHHHHHHHHHHhc--cCCCeE-EEEecCCC
Confidence 67777777777665543 89999999999999998887521 123455 56666543
|
| >1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=95.85 E-value=0.011 Score=56.42 Aligned_cols=38 Identities=21% Similarity=0.367 Sum_probs=31.3
Q ss_pred hhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhc
Q 012210 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRC 265 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~ 265 (468)
+++...++.+..+.+.. ++++.||||||.+|..++..+
T Consensus 121 ~~~~~~l~~~~~~~p~~--~i~vtGHSLGGalA~l~a~~l 158 (279)
T 1tia_A 121 DDIIKELKEVVAQNPNY--ELVVVGHSLGAAVATLAATDL 158 (279)
T ss_pred HHHHHHHHHHHHHCCCC--eEEEEecCHHHHHHHHHHHHH
Confidence 67777787777665443 899999999999999999875
|
| >2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A | Back alignment and structure |
|---|
Probab=95.74 E-value=0.01 Score=61.58 Aligned_cols=59 Identities=15% Similarity=0.103 Sum_probs=45.4
Q ss_pred HhhhHHHHHHHHHhhc---CCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccc
Q 012210 224 LEEDVPAAMEYIRAQS---KPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 224 ~~~D~~a~i~~l~~~~---~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
...|..+++++++.+. +.+.++|+|+|+|.||.++..++.... ....++++|+++++..
T Consensus 163 gl~D~~~al~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~---~~~lf~~~i~~sg~~~ 224 (498)
T 2ogt_A 163 GILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPE---ASGLFRRAMLQSGSGS 224 (498)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGG---GTTSCSEEEEESCCTT
T ss_pred ccHHHHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhccc---ccchhheeeeccCCcc
Confidence 3489999999998863 334458999999999999988887631 1345899999988654
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=95.37 E-value=0.0064 Score=70.61 Aligned_cols=67 Identities=13% Similarity=0.099 Sum_probs=42.8
Q ss_pred CccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccC
Q 012210 391 HKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 466 (468)
Q Consensus 391 ~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~ 466 (468)
..+++|++++.|++|.. +.+....+.+...+ ..+++.+ + ++|+.+++ ....+.+.+.|.+||.+...
T Consensus 1206 ~~~~~pv~l~~~~~~~~-~~~~~~~W~~~~~~-~~~~~~v--~-G~H~~ml~----~~~~~~~a~~l~~~L~~~~~ 1272 (1304)
T 2vsq_A 1206 GQVKADIDLLTSGADFD-IPEWLASWEEATTG-VYRMKRG--F-GTHAEMLQ----GETLDRNAEILLEFLNTQTV 1272 (1304)
T ss_dssp -CBSSEEEEEECSSCCC-CCSSEECSSTTBSS-CCCEEEC--S-SCTTGGGS----HHHHHHHHHHHHHHHHCCCC
T ss_pred CCcCCCEEEEEecCccc-cccchhhHHHHhCC-CeEEEEe--C-CCHHHHCC----CHHHHHHHHHHHHHHhccch
Confidence 56899999999999873 22322333444433 3456666 4 68877764 12345888999999986543
|
| >1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A {Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A | Back alignment and structure |
|---|
Probab=95.34 E-value=0.019 Score=54.46 Aligned_cols=38 Identities=18% Similarity=0.179 Sum_probs=31.5
Q ss_pred hhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhc
Q 012210 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRC 265 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~ 265 (468)
+++...++.+..+.+.. ++.+.||||||.+|..++..+
T Consensus 121 ~~~~~~l~~~~~~~~~~--~i~vtGHSLGGalA~l~a~~~ 158 (269)
T 1lgy_A 121 NDYFPVVQEQLTAHPTY--KVIVTGHSLGGAQALLAGMDL 158 (269)
T ss_dssp HHHHHHHHHHHHHCTTC--EEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCC--eEEEeccChHHHHHHHHHHHH
Confidence 77778888877765543 899999999999999998875
|
| >1whs_B Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1wht_B* 1bcs_B* 1bcr_B* 3sc2_B* | Back alignment and structure |
|---|
Probab=95.16 E-value=0.046 Score=47.17 Aligned_cols=64 Identities=19% Similarity=0.169 Sum_probs=54.5
Q ss_pred CccEEEEecCCCCcCCHHHHHHHHHhCCCC----------------------ceeEEEecCCCCCCCCcccccccccchh
Q 012210 394 NIPILAIAGDQDLICPPEAVEETVKLLPED----------------------LVTYKVFGEPSGPHYAHYDLVGGRMAVE 451 (468)
Q Consensus 394 ~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~----------------------~~~~~v~~~~~agH~~H~e~~~~~~~pe 451 (468)
.++|||..|+.|.+||.-..+.+.+.+.-. +.+++.+ .++||....+ +|+
T Consensus 64 girvlIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~vaG~~~~~~~Ltf~~V--~~AGHmVP~d------qP~ 135 (153)
T 1whs_B 64 GLRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSV--RGAGHEVPLH------RPR 135 (153)
T ss_dssp TCEEEEEEETTCSSSCHHHHHHHHHTTTCCEEEEEEEEEETTEEEEEEEEETTEEEEEE--TTCCSSHHHH------SHH
T ss_pred CceEEEEecCcCcccccHhHHHHHHhCCCCCcccccceeECCCccEEEEEeCeEEEEEE--CCCcccCccc------CHH
Confidence 589999999999999999999999988621 2466666 8999999987 999
Q ss_pred hHHHHHHHHHhhcc
Q 012210 452 QVYPCIVQFLGRYD 465 (468)
Q Consensus 452 ~v~~~I~~FL~~~~ 465 (468)
.....+..||....
T Consensus 136 ~a~~m~~~fl~~~~ 149 (153)
T 1whs_B 136 QALVLFQYFLQGKP 149 (153)
T ss_dssp HHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHCCCC
Confidence 99999999998653
|
| >1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A | Back alignment and structure |
|---|
Probab=94.89 E-value=0.039 Score=57.04 Aligned_cols=57 Identities=18% Similarity=0.267 Sum_probs=44.0
Q ss_pred hhhHHHHHHHHHhhc---CCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcccc
Q 012210 225 EEDVPAAMEYIRAQS---KPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSL 284 (468)
Q Consensus 225 ~~D~~a~i~~l~~~~---~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~ 284 (468)
..|..+++++++... +.+.++|+|+|||+||.++..++.... .+..++++|+.++..
T Consensus 159 l~D~~~al~wv~~~i~~fggDp~~V~l~G~SaGg~~~~~~~~~~~---~~~lf~~~i~~sg~~ 218 (489)
T 1qe3_A 159 LLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPA---AKGLFQKAIMESGAS 218 (489)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGG---GTTSCSEEEEESCCC
T ss_pred hHHHHHHHHHHHHHHHHhCCCcceeEEEEechHHHHHHHHHhCcc---ccchHHHHHHhCCCC
Confidence 488999999998764 334458999999999999988876521 135689999998865
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=94.72 E-value=0.65 Score=47.25 Aligned_cols=63 Identities=21% Similarity=0.287 Sum_probs=51.2
Q ss_pred CccEEEEecCCCCcCCHHHHHHHHHhCCCC---------------------------ceeEEEecCCCCCCCCccccccc
Q 012210 394 NIPILAIAGDQDLICPPEAVEETVKLLPED---------------------------LVTYKVFGEPSGPHYAHYDLVGG 446 (468)
Q Consensus 394 ~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~---------------------------~~~~~v~~~~~agH~~H~e~~~~ 446 (468)
.++|||..|+.|.+|+.-..+.+.+.+.-. +.+++.+ .++||....+
T Consensus 361 girVlIYsGD~D~icn~~Gt~~wi~~L~~~~~~~~~pw~~~~~~~~~~vaG~~~~y~nLtf~tV--~gAGHmVP~d---- 434 (452)
T 1ivy_A 361 KYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTI--KGAGHMVPTD---- 434 (452)
T ss_dssp CCEEEEEEETTCSSSCHHHHHHHHHHTCCCEEEEEEEEEEECTTSCEEEEEEEEEESSEEEEEE--TTCCSSHHHH----
T ss_pred CceEEEEeCCCCccCCcHHHHHHHHhcCCcccccceeeeeccCCCCcccceEEEEEcceEEEEE--CCCcccCccc----
Confidence 689999999999999999999888877521 1233344 7899999887
Q ss_pred ccchhhHHHHHHHHHhhc
Q 012210 447 RMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 447 ~~~pe~v~~~I~~FL~~~ 464 (468)
+|+.....+..||...
T Consensus 435 --qP~~al~m~~~fl~g~ 450 (452)
T 1ivy_A 435 --KPLAAFTMFSRFLNKQ 450 (452)
T ss_dssp --CHHHHHHHHHHHHTTC
T ss_pred --ChHHHHHHHHHHhcCC
Confidence 9999999999999753
|
| >2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} | Back alignment and structure |
|---|
Probab=94.47 E-value=0.067 Score=56.10 Aligned_cols=93 Identities=8% Similarity=0.039 Sum_probs=59.6
Q ss_pred HHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhc---CCCCCcEEEE
Q 012210 173 LSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQS---KPKDGKLLAI 249 (468)
Q Consensus 173 ~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~---~~~~~~v~lv 249 (468)
.+..|+ .+|+.|+.++.......|.. .... .... .+...|..+++++++... +.+.++|+|+
T Consensus 137 ~~~~l~---~~g~vvv~~nYRl~~~Gf~~-------~~~~----~~~~-n~gl~D~~~al~wv~~~i~~fggDp~~v~l~ 201 (551)
T 2fj0_A 137 GPEYLV---SKDVIVITFNYRLNVYGFLS-------LNST----SVPG-NAGLRDMVTLLKWVQRNAHFFGGRPDDVTLM 201 (551)
T ss_dssp BCTTGG---GGSCEEEEECCCCHHHHHCC-------CSSS----SCCS-CHHHHHHHHHHHHHHHHTGGGTEEEEEEEEE
T ss_pred CHHHHH---hCCeEEEEeCCcCCcccccc-------Cccc----CCCC-chhHHHHHHHHHHHHHHHHHhCCChhhEEEE
Confidence 345566 78999999777532100000 0000 1111 223489999999998763 3344589999
Q ss_pred EEehhHHHHHHHHHhcCCCCCcccccceeEEccc
Q 012210 250 GHSMGGILLYAMLSRCGFEGRESRLAAIVTLASS 283 (468)
Q Consensus 250 GhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~ 283 (468)
|+|.||.++..++.... .+..++++|++++.
T Consensus 202 G~SaGg~~~~~~~~~~~---~~~lf~~~i~~sg~ 232 (551)
T 2fj0_A 202 GQSAGAAATHILSLSKA---ADGLFRRAILMSGT 232 (551)
T ss_dssp EETHHHHHHHHHTTCGG---GTTSCSEEEEESCC
T ss_pred EEChHHhhhhccccCch---hhhhhhheeeecCC
Confidence 99999999998886521 13468889998875
|
| >3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A* | Back alignment and structure |
|---|
Probab=94.37 E-value=0.056 Score=51.53 Aligned_cols=55 Identities=16% Similarity=0.245 Sum_probs=35.9
Q ss_pred hhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccc
Q 012210 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASS 283 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~ 283 (468)
+++...++.+....+.. ++.+.|||+||.+|..+|....... +.....++.+++|
T Consensus 122 ~~~~~~l~~~~~~~p~~--~l~vtGHSLGGalA~l~a~~l~~~~-~~~~~~~~tfg~P 176 (279)
T 3uue_A 122 DDIFTAVKKYKKEKNEK--RVTVIGHSLGAAMGLLCAMDIELRM-DGGLYKTYLFGLP 176 (279)
T ss_dssp HHHHHHHHHHHHHHTCC--CEEEEEETHHHHHHHHHHHHHHHHS-TTCCSEEEEESCC
T ss_pred HHHHHHHHHHHHhCCCc--eEEEcccCHHHHHHHHHHHHHHHhC-CCCceEEEEecCC
Confidence 56666677666655443 8999999999999998887641110 2234445555554
|
| >3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum} | Back alignment and structure |
|---|
Probab=94.11 E-value=0.055 Score=50.94 Aligned_cols=38 Identities=24% Similarity=0.304 Sum_probs=29.5
Q ss_pred hhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhc
Q 012210 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRC 265 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~ 265 (468)
+++...++.+..+.+.. ++.+.|||+||.+|...+...
T Consensus 108 ~~~~~~l~~~~~~~p~~--~i~vtGHSLGGalA~l~a~~l 145 (258)
T 3g7n_A 108 DTIITEVKALIAKYPDY--TLEAVGHSLGGALTSIAHVAL 145 (258)
T ss_dssp HHHHHHHHHHHHHSTTC--EEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCC--eEEEeccCHHHHHHHHHHHHH
Confidence 56666677666665543 999999999999999888764
|
| >3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae} | Back alignment and structure |
|---|
Probab=93.80 E-value=0.067 Score=51.95 Aligned_cols=38 Identities=24% Similarity=0.336 Sum_probs=29.9
Q ss_pred hhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhc
Q 012210 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRC 265 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~ 265 (468)
+++...++.+....+.. ++.+.|||+||.+|..++...
T Consensus 120 ~~l~~~l~~~~~~~p~~--~i~vtGHSLGGAlA~L~a~~l 157 (319)
T 3ngm_A 120 AAATAAVAKARKANPSF--KVVSVGHSLGGAVATLAGANL 157 (319)
T ss_dssp HHHHHHHHHHHHSSTTC--EEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCC--ceEEeecCHHHHHHHHHHHHH
Confidence 56677777776655443 899999999999999988764
|
| >3qpa_A Cutinase; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted; HET: MIR; 0.85A {Nectria haematococca} PDB: 3qpc_A* 1cex_A 1oxm_A* 1cui_A 1cus_A 2cut_A 1cuj_A 1cuy_A 1xzl_A* 1xzk_A* 1xzm_A* 1cuh_A 1cuu_A 3esc_A* 1cua_A* 3esa_A* 3esb_A* 3ef3_A* 3esd_A* 1cux_A ... | Back alignment and structure |
|---|
Probab=92.70 E-value=0.2 Score=44.86 Aligned_cols=58 Identities=14% Similarity=0.157 Sum_probs=43.3
Q ss_pred hhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccc
Q 012210 225 EEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 225 ~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
..|+...|+....+.+.. |++|+|+|+|+.++-..+...+. ...++|.++|+++-+..
T Consensus 80 ~~~~~~~i~~~~~~CP~t--kiVL~GYSQGA~V~~~~~~~l~~-~~~~~V~avvlfGdP~~ 137 (197)
T 3qpa_A 80 IREMLGLFQQANTKCPDA--TLIAGGYXQGAALAAASIEDLDS-AIRDKIAGTVLFGYTKN 137 (197)
T ss_dssp HHHHHHHHHHHHHHCTTC--EEEEEEETHHHHHHHHHHHHSCH-HHHTTEEEEEEESCTTT
T ss_pred HHHHHHHHHHHHHhCCCC--cEEEEecccccHHHHHHHhcCCH-hHHhheEEEEEeeCCcc
Confidence 378888888887776655 99999999999999887765410 00267999999876543
|
| >1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... | Back alignment and structure |
|---|
Probab=92.63 E-value=0.2 Score=52.15 Aligned_cols=57 Identities=16% Similarity=0.169 Sum_probs=44.6
Q ss_pred hhhHHHHHHHHHhhc---CCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcccc
Q 012210 225 EEDVPAAMEYIRAQS---KPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSL 284 (468)
Q Consensus 225 ~~D~~a~i~~l~~~~---~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~ 284 (468)
..|..+++++++... +.+.++|+|+|+|.||.++..++.... ....++++|++++..
T Consensus 168 l~D~~~al~wv~~~i~~fggdp~~vti~G~SaGg~~~~~~~~~~~---~~~lf~~~i~~Sg~~ 227 (529)
T 1p0i_A 168 LFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPG---SHSLFTRAILQSGSF 227 (529)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGG---GGGGCSEEEEESCCT
T ss_pred HHHHHHHHHHHHHHHHHhCCChhheEEeeccccHHHHHHHHhCcc---chHHHHHHHHhcCcc
Confidence 489999999998763 444468999999999999998887631 134688999988754
|
| >3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=92.52 E-value=0.15 Score=49.16 Aligned_cols=38 Identities=16% Similarity=0.232 Sum_probs=28.7
Q ss_pred hhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhc
Q 012210 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRC 265 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~ 265 (468)
.++...++.+....+. .++.+.|||+||.+|..+|...
T Consensus 138 ~~i~~~l~~~~~~~p~--~~i~vtGHSLGGalA~l~a~~l 175 (301)
T 3o0d_A 138 NQIGPKLDSVIEQYPD--YQIAVTGHSLGGAAALLFGINL 175 (301)
T ss_dssp HHHHHHHHHHHHHSTT--SEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCC--ceEEEeccChHHHHHHHHHHHH
Confidence 4555666666555443 3899999999999999988865
|
| >2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... | Back alignment and structure |
|---|
Probab=92.37 E-value=0.23 Score=51.84 Aligned_cols=56 Identities=13% Similarity=0.082 Sum_probs=43.1
Q ss_pred hhhHHHHHHHHHhhc---CCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccc
Q 012210 225 EEDVPAAMEYIRAQS---KPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASS 283 (468)
Q Consensus 225 ~~D~~a~i~~l~~~~---~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~ 283 (468)
..|..+++++++.+. +.+.++|+|+|+|.||.++..++.... .+..++++|+.++.
T Consensus 173 l~D~~~al~wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~~---~~~lf~~~i~~sg~ 231 (543)
T 2ha2_A 173 LLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLP---SRSLFHRAVLQSGT 231 (543)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHH---HHTTCSEEEEESCC
T ss_pred HHHHHHHHHHHHHHHHHhCCChhheEEEeechHHHHHHHHHhCcc---cHHhHhhheeccCC
Confidence 489999999998763 344468999999999999988776520 03468889988874
|
| >2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* | Back alignment and structure |
|---|
Probab=92.23 E-value=0.17 Score=52.83 Aligned_cols=58 Identities=14% Similarity=0.155 Sum_probs=44.6
Q ss_pred HhhhHHHHHHHHHhhc---CCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcccc
Q 012210 224 LEEDVPAAMEYIRAQS---KPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSL 284 (468)
Q Consensus 224 ~~~D~~a~i~~l~~~~---~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~ 284 (468)
...|..+++++++... +.+.++|+|+|||.||.++..++.... .+..++++|++++..
T Consensus 172 gl~D~~~al~wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~---~~~lf~~ai~~Sg~~ 232 (542)
T 2h7c_A 172 GHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPL---AKNLFHRAISESGVA 232 (542)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGG---GTTSCSEEEEESCCT
T ss_pred hHHHHHHHHHHHHHHHHHcCCCccceEEEEechHHHHHHHHHhhhh---hhHHHHHHhhhcCCc
Confidence 3489999999998763 444468999999999999998887621 145688889887654
|
| >4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A* | Back alignment and structure |
|---|
Probab=92.20 E-value=0.56 Score=48.02 Aligned_cols=60 Identities=18% Similarity=0.308 Sum_probs=51.6
Q ss_pred ChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcccc
Q 012210 219 DFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSL 284 (468)
Q Consensus 219 ~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~ 284 (468)
+.++-+ .|+..++++++........|++++|-|.||+++.-+-.+| |+-|.+.+..++++
T Consensus 104 t~eQAL-aD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LaAW~R~kY-----P~lv~ga~ASSApv 163 (472)
T 4ebb_A 104 TVEQAL-ADFAELLRALRRDLGAQDAPAIAFGGSYGGMLSAYLRMKY-----PHLVAGALAASAPV 163 (472)
T ss_dssp SHHHHH-HHHHHHHHHHHHHTTCTTCCEEEEEETHHHHHHHHHHHHC-----TTTCSEEEEETCCT
T ss_pred CHHHHH-HHHHHHHHHHHhhcCCCCCCEEEEccCccchhhHHHHhhC-----CCeEEEEEecccce
Confidence 555654 9999999999998876667999999999999999999998 88899888877654
|
| >1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... | Back alignment and structure |
|---|
Probab=92.00 E-value=0.24 Score=51.65 Aligned_cols=57 Identities=14% Similarity=0.147 Sum_probs=44.1
Q ss_pred hhhHHHHHHHHHhhc---CCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcccc
Q 012210 225 EEDVPAAMEYIRAQS---KPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSL 284 (468)
Q Consensus 225 ~~D~~a~i~~l~~~~---~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~ 284 (468)
..|..+++++++.+. +.+.++|+|+|+|.||.++..++.... ....++++|+.++..
T Consensus 170 l~D~~~al~wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~~---~~~lf~~~i~~Sg~~ 229 (537)
T 1ea5_A 170 LLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPG---SRDLFRRAILQSGSP 229 (537)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHH---HHTTCSEEEEESCCT
T ss_pred cHHHHHHHHHHHHHHHHhCCCccceEEEecccHHHHHHHHHhCcc---chhhhhhheeccCCc
Confidence 489999999998864 444568999999999999988877520 034688999988754
|
| >4az3_B Lysosomal protective protein 20 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_B* | Back alignment and structure |
|---|
Probab=91.87 E-value=0.44 Score=40.90 Aligned_cols=64 Identities=20% Similarity=0.270 Sum_probs=51.5
Q ss_pred cCccEEEEecCCCCcCCHHHHHHHHHhCCCC---------------------------ceeEEEecCCCCCCCCcccccc
Q 012210 393 CNIPILAIAGDQDLICPPEAVEETVKLLPED---------------------------LVTYKVFGEPSGPHYAHYDLVG 445 (468)
Q Consensus 393 I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~---------------------------~~~~~v~~~~~agH~~H~e~~~ 445 (468)
-.++|||..|+.|.+|+.-..+.+.+.+.-. +.+++.+ .++||....+
T Consensus 62 ~girVliy~Gd~D~icn~~G~~~~i~~L~w~~~~~~~~w~~~~~~~~~~vaG~~~~~~nLtf~~V--~~AGHmVP~d--- 136 (155)
T 4az3_B 62 QKYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTI--KGAGHMVPTD--- 136 (155)
T ss_dssp CCCEEEEEEETTCSSSCHHHHHHHHHHTCCSSCCCCEEEEEEETTTEEEEEEEEEEETTEEEEEE--TTCCSCHHHH---
T ss_pred cCceEEEEecccCcccCcHhHHHHHHhcccccccccccceeecccCCCEEEEEEEEeCCEEEEEE--CCCcCcChhh---
Confidence 3589999999999999999888888877421 1223444 7899999987
Q ss_pred cccchhhHHHHHHHHHhhc
Q 012210 446 GRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 446 ~~~~pe~v~~~I~~FL~~~ 464 (468)
+|+...+.+..||...
T Consensus 137 ---qP~~al~m~~~fl~g~ 152 (155)
T 4az3_B 137 ---KPLAAFTMFSRFLNKQ 152 (155)
T ss_dssp ---CHHHHHHHHHHHHTTC
T ss_pred ---CHHHHHHHHHHHHcCC
Confidence 9999999999999753
|
| >3dcn_A Cutinase, cutin hydrolase; catalytic triad, secreted, serine esterase; 1.90A {Glomerella cingulata} SCOP: c.69.1.0 PDB: 3dd5_A 3dea_A* | Back alignment and structure |
|---|
Probab=91.34 E-value=0.3 Score=43.94 Aligned_cols=58 Identities=9% Similarity=0.136 Sum_probs=42.8
Q ss_pred hhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccc
Q 012210 225 EEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 225 ~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
..|+...|+....+.+.. |++|+|+|+|+.++-..+...+. ...++|.++|+++-|..
T Consensus 88 ~~~~~~~i~~~~~~CP~t--kiVL~GYSQGA~V~~~~~~~l~~-~~~~~V~avvlfGdP~~ 145 (201)
T 3dcn_A 88 INEARRLFTLANTKCPNA--AIVSGGYSQGTAVMAGSISGLST-TIKNQIKGVVLFGYTKN 145 (201)
T ss_dssp HHHHHHHHHHHHHHCTTS--EEEEEEETHHHHHHHHHHTTSCH-HHHHHEEEEEEETCTTT
T ss_pred HHHHHHHHHHHHHhCCCC--cEEEEeecchhHHHHHHHhcCCh-hhhhheEEEEEeeCccc
Confidence 378888888887776655 99999999999999887754300 00257899999876543
|
| >1g66_A Acetyl xylan esterase II; serine hydrolase, acetyl xylopyranose, hydrolase; 0.90A {Penicillium purpurogenum} SCOP: c.69.1.30 PDB: 1bs9_A 2axe_A* | Back alignment and structure |
|---|
Probab=91.24 E-value=0.33 Score=43.97 Aligned_cols=59 Identities=17% Similarity=0.207 Sum_probs=40.9
Q ss_pred hhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhc-------C--CCCCc----ccccceeEEccccc
Q 012210 225 EEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRC-------G--FEGRE----SRLAAIVTLASSLD 285 (468)
Q Consensus 225 ~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~-------~--~~~~p----~~V~~lVllap~~~ 285 (468)
..|+...|+....+.+.. |++|+|||+|+.++-..+... . ....+ ++|.++++++.+..
T Consensus 65 ~~~~~~~i~~~~~~CP~t--kivl~GYSQGA~V~~~~~~~~~~~~~~i~~~~~~l~~~~~~~V~avvlfGdP~~ 136 (207)
T 1g66_A 65 IAAVASAVNSFNSQCPST--KIVLVGYSQGGEIMDVALCGGGDPNQGYTNTAVQLSSSAVNMVKAAIFMGDPMF 136 (207)
T ss_dssp HHHHHHHHHHHHHHSTTC--EEEEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCTTC
T ss_pred HHHHHHHHHHHHHhCCCC--cEEEEeeCchHHHHHHHHhcccccccccccCCCCCChhhhccEEEEEEEcCCCc
Confidence 477777777777776555 999999999999998876410 0 00112 57888888876543
|
| >1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=91.10 E-value=0.32 Score=50.79 Aligned_cols=59 Identities=14% Similarity=0.218 Sum_probs=43.5
Q ss_pred hhhHHHHHHHHHhhc---CCCCCcEEEEEEehhHHHHHHHHHhcCCC---CCcccccceeEEccc
Q 012210 225 EEDVPAAMEYIRAQS---KPKDGKLLAIGHSMGGILLYAMLSRCGFE---GRESRLAAIVTLASS 283 (468)
Q Consensus 225 ~~D~~a~i~~l~~~~---~~~~~~v~lvGhS~GG~ia~~~a~~~~~~---~~p~~V~~lVllap~ 283 (468)
..|..+++++++... +.+.++|+|+|+|.||.++..++..+... .....++++|++++.
T Consensus 187 l~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~ 251 (544)
T 1thg_A 187 LHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGG 251 (544)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCC
T ss_pred HHHHHHHHHHHHHHHHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEeccc
Confidence 489999999998763 44446899999999999988777652000 014568899998864
|
| >1qoz_A AXE, acetyl xylan esterase; hydrolase, xylan degradation; HET: NAG; 1.90A {Trichoderma reesei} SCOP: c.69.1.30 | Back alignment and structure |
|---|
Probab=90.62 E-value=0.4 Score=43.39 Aligned_cols=59 Identities=15% Similarity=0.180 Sum_probs=40.7
Q ss_pred hhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHh-------cC--CCCCc----ccccceeEEccccc
Q 012210 225 EEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSR-------CG--FEGRE----SRLAAIVTLASSLD 285 (468)
Q Consensus 225 ~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~-------~~--~~~~p----~~V~~lVllap~~~ 285 (468)
..++...|+....+.+.. |++|+|||+|+.++-..+.. .. ....+ ++|.++++++.+..
T Consensus 65 ~~~~~~~i~~~~~~CP~t--kivl~GYSQGA~V~~~~~~~~~~~~~~i~~~~~~l~~~~~~~V~avvlfGdP~~ 136 (207)
T 1qoz_A 65 TNAAAAAINNFHNSCPDT--QLVLVGYSQGAQIFDNALCGGGDPGEGITNTAVPLTAGAVSAVKAAIFMGDPRN 136 (207)
T ss_dssp HHHHHHHHHHHHHHCTTS--EEEEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCTTC
T ss_pred HHHHHHHHHHHHhhCCCC--cEEEEEeCchHHHHHHHHhccCcccccccCCCCCCChHHhccEEEEEEEcCCcc
Confidence 477777777777766554 99999999999999887741 00 00112 46888888876543
|
| >1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* | Back alignment and structure |
|---|
Probab=90.45 E-value=0.4 Score=49.92 Aligned_cols=59 Identities=14% Similarity=0.149 Sum_probs=42.6
Q ss_pred hhhHHHHHHHHHhhc---CCCCCcEEEEEEehhHHHHHHHHHhcCCC---CCcccccceeEEccc
Q 012210 225 EEDVPAAMEYIRAQS---KPKDGKLLAIGHSMGGILLYAMLSRCGFE---GRESRLAAIVTLASS 283 (468)
Q Consensus 225 ~~D~~a~i~~l~~~~---~~~~~~v~lvGhS~GG~ia~~~a~~~~~~---~~p~~V~~lVllap~ 283 (468)
..|..+++++++++. +.+.++|+|+|+|.||..+..++...... ..+..++++|+.++.
T Consensus 179 l~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~ 243 (534)
T 1llf_A 179 LKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGA 243 (534)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCC
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccC
Confidence 489999999998763 34446899999999998877666542000 114568889998874
|
| >1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* | Back alignment and structure |
|---|
Probab=90.12 E-value=0.51 Score=49.75 Aligned_cols=58 Identities=12% Similarity=0.065 Sum_probs=43.6
Q ss_pred HhhhHHHHHHHHHhhc---CCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcccc
Q 012210 224 LEEDVPAAMEYIRAQS---KPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSL 284 (468)
Q Consensus 224 ~~~D~~a~i~~l~~~~---~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~ 284 (468)
...|..+++++++... +.+.++|+|+|+|.||.++..++... .....++++|+.++..
T Consensus 207 gl~D~~~al~wv~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~---~~~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 207 GLWDQALAIRWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSP---VTRGLVKRGMMQSGTM 267 (585)
T ss_dssp HHHHHHHHHHHHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCT---TTTTSCCEEEEESCCT
T ss_pred cHHHHHHHHHHHHHHHHHhCCCcceeEEeecchHHHHHHHHHhCC---cccchhHhhhhhcccc
Confidence 3489999999998763 33445899999999999988877652 1134688888887643
|
| >3qpd_A Cutinase 1; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted, phosphorylated Ser residue; HET: SEP; 1.57A {Aspergillus oryzae} PDB: 3gbs_A | Back alignment and structure |
|---|
Probab=90.05 E-value=0.47 Score=42.12 Aligned_cols=56 Identities=13% Similarity=0.220 Sum_probs=40.2
Q ss_pred hhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcccc
Q 012210 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSL 284 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~ 284 (468)
+++...++....+.+.. |++|+|+|+|+.++-..+...+. ...++|.++++++-+.
T Consensus 77 ~~~~~~i~~~~~~CP~t--kivl~GYSQGA~V~~~~~~~l~~-~~~~~V~avvlfGdP~ 132 (187)
T 3qpd_A 77 AEAQGLFEQAVSKCPDT--QIVAGGYSQGTAVMNGAIKRLSA-DVQDKIKGVVLFGYTR 132 (187)
T ss_dssp HHHHHHHHHHHHHCTTC--EEEEEEETHHHHHHHHHHTTSCH-HHHHHEEEEEEESCTT
T ss_pred HHHHHHHHHHHHhCCCC--cEEEEeeccccHHHHhhhhcCCH-hhhhhEEEEEEeeCCc
Confidence 66667777666666554 99999999999999887754310 0025799999987654
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=89.10 E-value=0.074 Score=65.38 Aligned_cols=61 Identities=13% Similarity=0.111 Sum_probs=0.0
Q ss_pred ccCccEEEEecCCCCcCCHH--HHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccch--hhHHHHHHHHHh
Q 012210 392 KCNIPILAIAGDQDLICPPE--AVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAV--EQVYPCIVQFLG 462 (468)
Q Consensus 392 ~I~vPvLiI~G~~D~ivp~~--~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~p--e~v~~~I~~FL~ 462 (468)
.+.+|++++.|++|...+.. ....+.+...+ ..+++.+ .++|+..++ .+ +.+.+.|.+.|.
T Consensus 2439 ~l~~pI~lf~a~~d~~~~~~~~~~~~W~~~t~g-~~~v~~v---~G~H~~ml~------~~~v~~la~~L~~~L~ 2503 (2512)
T 2vz8_A 2439 TYHGNVTLLRAKTGGAYGEDLGADYNLSQVCDG-KVSVHVI---EGDHRTLLE------GSGLESILSIIHSCLA 2503 (2512)
T ss_dssp ---------------------------------------------------------------------------
T ss_pred CccCCEEEEEecCCCcccccccccccHHHhcCC-CcEEEEE---CCCchHhhC------CccHHHHHHHHHHHHh
Confidence 58999999999998765443 22234444433 4466665 357776664 33 355566655554
|
| >3hc7_A Gene 12 protein, GP12; alpha/beta sandwich, cell adhesion; 2.00A {Mycobacterium phage D29} | Back alignment and structure |
|---|
Probab=89.03 E-value=0.74 Score=42.95 Aligned_cols=58 Identities=14% Similarity=0.164 Sum_probs=40.4
Q ss_pred hhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhc--C----CCCCcccccceeEEccccc
Q 012210 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRC--G----FEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~--~----~~~~p~~V~~lVllap~~~ 285 (468)
.++...++....+.+.. |++++|+|+|+.++-..+... + .....++|.++|+++-+..
T Consensus 58 ~~~~~~i~~~~~~CP~t--kiVL~GYSQGA~V~~~~l~~~i~~~~g~~~~~~~~V~avvlfGdP~r 121 (254)
T 3hc7_A 58 AELILQIELKLDADPYA--DFAMAGYSQGAIVVGQVLKHHILPPTGRLHRFLHRLKKVIFWGNPMR 121 (254)
T ss_dssp HHHHHHHHHHHHHCTTC--CEEEEEETHHHHHHHHHHHHHTSSTTCTTGGGGGGEEEEEEESCTTC
T ss_pred HHHHHHHHHHHhhCCCC--eEEEEeeCchHHHHHHHHHhhccCCCCCchhhhhhEEEEEEEeCCCC
Confidence 66666666666665544 999999999999998877552 0 0012468999999976544
|
| >1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=88.92 E-value=0.55 Score=48.76 Aligned_cols=60 Identities=17% Similarity=0.099 Sum_probs=43.2
Q ss_pred hhhHHHHHHHHHhhc---CCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccc
Q 012210 225 EEDVPAAMEYIRAQS---KPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 225 ~~D~~a~i~~l~~~~---~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
..|..+++++++... +.+.++|+|+|+|.||..+..++..... ..+..++++|+.++...
T Consensus 164 l~D~~~al~wv~~ni~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~-~~~~lf~~~i~~sg~~~ 226 (522)
T 1ukc_A 164 LLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGG-KDEGLFIGAIVESSFWP 226 (522)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGT-CCCSSCSEEEEESCCCC
T ss_pred HHHHHHHHHHHHHHHHHcCCCchhEEEEEEChHHHHHHHHHhCCCc-cccccchhhhhcCCCcC
Confidence 489999999998764 3344689999999999887766654210 01346888888887543
|
| >1gxs_B P-(S)-hydroxymandelonitrIle lyase chain B; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=88.24 E-value=1.5 Score=37.67 Aligned_cols=64 Identities=19% Similarity=0.261 Sum_probs=51.8
Q ss_pred CccEEEEecCCCCcCCHHHHHHHHHhCCCC-------------------------ceeEEEecCCCCCCCCccccccccc
Q 012210 394 NIPILAIAGDQDLICPPEAVEETVKLLPED-------------------------LVTYKVFGEPSGPHYAHYDLVGGRM 448 (468)
Q Consensus 394 ~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~-------------------------~~~~~v~~~~~agH~~H~e~~~~~~ 448 (468)
.++|||..|+.|.+|+.-..+.+.+.+.-. +.++..+ .++||....+
T Consensus 66 girVliysGd~D~i~~~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~~vaG~~~~~~nLtf~~V--~~AGHmVP~d------ 137 (158)
T 1gxs_B 66 GLRVWVYSGDTDSVVPVSSTRRSLAALELPVKTSWYPWYMAPTEREVGGWSVQYEGLTYVTV--RGAGHLVPVH------ 137 (158)
T ss_dssp TCEEEEEEETTCSSSCHHHHHHHHHTTCCCEEEEEEEEESSTTCCSEEEEEEEETTEEEEEE--TTCCSSHHHH------
T ss_pred CCeEEEEecccCccCCcHHHHHHHHHCCCcccCCccceEECCCCCcccceEEEeCCEEEEEE--CCCcccCccc------
Confidence 589999999999999999888888877421 1234444 7899999887
Q ss_pred chhhHHHHHHHHHhhcc
Q 012210 449 AVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 449 ~pe~v~~~I~~FL~~~~ 465 (468)
+|+.....+..||....
T Consensus 138 qP~~al~m~~~fl~g~~ 154 (158)
T 1gxs_B 138 RPAQAFLLFKQFLKGEP 154 (158)
T ss_dssp CHHHHHHHHHHHHHTCC
T ss_pred CcHHHHHHHHHHHcCCC
Confidence 99999999999998653
|
| >2czq_A Cutinase-like protein; alpha/beta hydrolase fold, hydrolase; HET: CIT; 1.05A {Cryptococcus SP} | Back alignment and structure |
|---|
Probab=88.22 E-value=0.73 Score=41.55 Aligned_cols=60 Identities=12% Similarity=0.051 Sum_probs=43.2
Q ss_pred HhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCC-CCcccccceeEEccccc
Q 012210 224 LEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFE-GRESRLAAIVTLASSLD 285 (468)
Q Consensus 224 ~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~-~~p~~V~~lVllap~~~ 285 (468)
...++...|+....+.+.. |++|+|+|+|+.++-..+...+.. ...++|.++++++-+..
T Consensus 59 G~~~~~~~i~~~~~~CP~t--kivl~GYSQGA~V~~~~~~~lg~~~~~~~~V~avvlfGdP~~ 119 (205)
T 2czq_A 59 GTADIIRRINSGLAANPNV--CYILQGYSQGAAATVVALQQLGTSGAAFNAVKGVFLIGNPDH 119 (205)
T ss_dssp HHHHHHHHHHHHHHHCTTC--EEEEEEETHHHHHHHHHHHHHCSSSHHHHHEEEEEEESCTTC
T ss_pred HHHHHHHHHHHHHhhCCCC--cEEEEeeCchhHHHHHHHHhccCChhhhhhEEEEEEEeCCCc
Confidence 3478888888877776555 999999999999988876543100 01357999999985543
|
| >3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* | Back alignment and structure |
|---|
Probab=88.16 E-value=0.63 Score=48.88 Aligned_cols=57 Identities=9% Similarity=0.059 Sum_probs=42.2
Q ss_pred HhhhHHHHHHHHHhhc---CCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcc
Q 012210 224 LEEDVPAAMEYIRAQS---KPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLAS 282 (468)
Q Consensus 224 ~~~D~~a~i~~l~~~~---~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap 282 (468)
...|..+++++++.+. +.+.++|+|+|+|.||.++..++..... +...+.++|+.++
T Consensus 188 gl~D~~~al~wv~~ni~~fggdp~~vti~G~SaGg~~~~~~~~~~~~--~~glf~~aI~~Sg 247 (574)
T 3bix_A 188 GLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYS--EKGLFQRAIAQSG 247 (574)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTCTTS--CTTSCCEEEEESC
T ss_pred cHHHHHHHHHHHHHHHHHhCCCchhEEEEeecccHHHHHHHhhCCCc--chhHHHHHHHhcC
Confidence 3489999999998863 4445689999999999999988876311 1134677787765
|
| >2ory_A Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Photobacterium SP} | Back alignment and structure |
|---|
Probab=87.96 E-value=0.48 Score=46.45 Aligned_cols=22 Identities=32% Similarity=0.415 Sum_probs=19.7
Q ss_pred CcEEEEEEehhHHHHHHHHHhc
Q 012210 244 GKLLAIGHSMGGILLYAMLSRC 265 (468)
Q Consensus 244 ~~v~lvGhS~GG~ia~~~a~~~ 265 (468)
.++.+.|||+||.+|..+|...
T Consensus 166 ~~i~vtGHSLGGAlA~l~a~~l 187 (346)
T 2ory_A 166 AKICVTGHSKGGALSSTLALWL 187 (346)
T ss_dssp EEEEEEEETHHHHHHHHHHHHH
T ss_pred ceEEEecCChHHHHHHHHHHHH
Confidence 3899999999999999888865
|
| >3aja_A Putative uncharacterized protein; alpha-beta hydrolase, serine esterase, cutinase, lipase, HYD; 2.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=87.60 E-value=0.92 Score=43.45 Aligned_cols=59 Identities=15% Similarity=0.153 Sum_probs=42.3
Q ss_pred hhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCC---CCCcccccceeEEccccc
Q 012210 225 EEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGF---EGRESRLAAIVTLASSLD 285 (468)
Q Consensus 225 ~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~---~~~p~~V~~lVllap~~~ 285 (468)
..++...|+....+.+.. |++|+|+|+|+.++-..+...+. .-.+++|.++|+++-+..
T Consensus 116 ~~~~~~~i~~~~~~CP~T--kiVL~GYSQGA~V~~~~~~~i~~g~~~~~~~~V~aVvLfGdP~r 177 (302)
T 3aja_A 116 MRTTVKAMTDMNDRCPLT--SYVIAGFSQGAVIAGDIASDIGNGRGPVDEDLVLGVTLIADGRR 177 (302)
T ss_dssp HHHHHHHHHHHHHHCTTC--EEEEEEETHHHHHHHHHHHHHHTTCSSSCGGGEEEEEEESCTTC
T ss_pred HHHHHHHHHHHHhhCCCC--cEEEEeeCchHHHHHHHHHhccCCCCCCChHHEEEEEEEeCCCC
Confidence 367777777776666554 99999999999999887754210 012578999999976543
|
| >2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A | Back alignment and structure |
|---|
Probab=86.91 E-value=0.84 Score=47.99 Aligned_cols=56 Identities=11% Similarity=0.086 Sum_probs=42.1
Q ss_pred HhhhHHHHHHHHHhhc---CCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcc
Q 012210 224 LEEDVPAAMEYIRAQS---KPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLAS 282 (468)
Q Consensus 224 ~~~D~~a~i~~l~~~~---~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap 282 (468)
...|..+++++++.+. +.+.++|+|+|+|.||.++..++... .....++++|+.++
T Consensus 163 gl~D~~~Al~wv~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~---~~~~lf~~ai~~Sg 221 (579)
T 2bce_A 163 GLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSP---YNKGLIKRAISQSG 221 (579)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCG---GGTTTCSEEEEESC
T ss_pred chHHHHHHHHHHHHHHHHhCCCcccEEEecccccchheeccccCc---chhhHHHHHHHhcC
Confidence 3489999999998763 34446899999999999998887652 01345788888765
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 468 | ||||
| d1k8qa_ | 377 | c.69.1.6 (A:) Gastric lipase {Dog (Canis familiari | 3e-21 | |
| d1j1ia_ | 268 | c.69.1.10 (A:) Meta cleavage compound hydrolase Ca | 1e-06 | |
| d1bn7a_ | 291 | c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus | 3e-05 | |
| d2rhwa1 | 283 | c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2 | 4e-05 | |
| d1zd3a2 | 322 | c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, | 6e-05 | |
| d1tcaa_ | 317 | c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Cand | 7e-05 | |
| d1q0ra_ | 297 | c.69.1.28 (A:) Aclacinomycin methylesterase RdmC { | 1e-04 | |
| d1hkha_ | 279 | c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. | 2e-04 | |
| d1azwa_ | 313 | c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas | 3e-04 | |
| d1va4a_ | 271 | c.69.1.12 (A:) Arylesterase {Pseudomonas fluoresce | 3e-04 | |
| d1c4xa_ | 281 | c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-di | 3e-04 | |
| d1wm1a_ | 313 | c.69.1.7 (A:) Proline aminopeptidase {Serratia mar | 4e-04 | |
| d1mtza_ | 290 | c.69.1.7 (A:) Tricorn interacting factor F1 {Archa | 5e-04 | |
| d1uk8a_ | 271 | c.69.1.10 (A:) Meta-cleavage product hydrolase Cum | 6e-04 | |
| d1b6ga_ | 310 | c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacte | 0.001 | |
| d1a8sa_ | 273 | c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas flu | 0.001 | |
| d1l7aa_ | 318 | c.69.1.25 (A:) Cephalosporin C deacetylase {Bacill | 0.002 | |
| d2vata1 | 376 | c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalospor | 0.003 | |
| d1vlqa_ | 322 | c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Therm | 0.003 | |
| d1thta_ | 302 | c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase | 0.003 | |
| d2pl5a1 | 362 | c.69.1.40 (A:5-366) Homoserine O-acetyltransferase | 0.003 | |
| d1ei9a_ | 279 | c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {C | 0.003 | |
| d1lnsa3 | 405 | c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopep | 0.004 |
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} Length = 377 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Score = 93.2 bits (230), Expect = 3e-21
Identities = 47/265 (17%), Positives = 95/265 (35%), Gaps = 26/265 (9%)
Query: 216 YDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLA 275
+ + FD + D+PA +++I ++ KL +GHS G + + S + +
Sbjct: 119 WAFSFDEMAKYDLPATIDFILKKTGQD--KLHYVGHSQGTTIGFIAFSTNPKLAKRIKTF 176
Query: 276 AIVTLASSLDYTSSK-STLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWL 334
+ +++ YT + + L L+ N P S V
Sbjct: 177 YALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLC 236
Query: 335 NNLISA-----EDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKD- 388
+N + ++ L + +N + +L + A + G + ++
Sbjct: 237 SNALFIICGFDTMNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNM 296
Query: 389 -----------HIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPH 437
++ ++PI G DL+ P V+ + LP +L+ ++ P
Sbjct: 297 MHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLLSKLP-NLIYHRKI-----PP 350
Query: 438 YAHYDLVGGRMAVEQVYPCIVQFLG 462
Y H D + A + VY IV +G
Sbjct: 351 YNHLDFIWAMDAPQAVYNEIVSMMG 375
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Score = 47.5 bits (111), Expect = 1e-06
Identities = 18/85 (21%), Positives = 33/85 (38%), Gaps = 10/85 (11%)
Query: 379 DRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHY 438
++GG F+ + I K +P L + G D + P E + + L+ + + P H+
Sbjct: 193 EQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLIDD--SWGYII--PHCGHW 248
Query: 439 AHYDLVGGRMAVEQVYPCIVQFLGR 463
A + E + FL
Sbjct: 249 AMIE------HPEDFANATLSFLSL 267
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Score = 43.3 bits (100), Expect = 3e-05
Identities = 15/78 (19%), Positives = 26/78 (33%), Gaps = 10/78 (12%)
Query: 384 FFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDL 443
Y + +H+ +P L G ++ PP + LP G HY D
Sbjct: 220 EAYMNWLHQSPVPKLLFWGTPGVLIPPAEAARLAESLPN--CKTVDI--GPGLHYLQED- 274
Query: 444 VGGRMAVEQVYPCIVQFL 461
+ + I ++L
Sbjct: 275 -----NPDLIGSEIARWL 287
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Score = 42.9 bits (99), Expect = 4e-05
Identities = 9/78 (11%), Positives = 24/78 (30%), Gaps = 10/78 (12%)
Query: 384 FFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDL 443
+ + + G D P + + + + + VF H+A ++
Sbjct: 213 WDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDD--ARLHVF--SKCGHWAQWE- 267
Query: 444 VGGRMAVEQVYPCIVQFL 461
++ ++ FL
Sbjct: 268 -----HADEFNRLVIDFL 280
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.6 bits (98), Expect = 6e-05
Identities = 12/78 (15%), Positives = 27/78 (34%), Gaps = 10/78 (12%)
Query: 384 FFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDL 443
+ K K IP L + ++D + P+ + +P + H+ D
Sbjct: 249 WACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPH--LKRGHI--EDCGHWTQMD- 303
Query: 444 VGGRMAVEQVYPCIVQFL 461
+V ++++L
Sbjct: 304 -----KPTEVNQILIKWL 316
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Score = 42.4 bits (99), Expect = 7e-05
Identities = 19/120 (15%), Positives = 33/120 (27%), Gaps = 11/120 (9%)
Query: 216 YDWDFDHYLEEDVPAAMEYIRAQ-----SKPKDGKLLAIGHSMGGILLYAMLSRCGFEGR 270
++ D EY+ + + KL + S GG++ L+
Sbjct: 64 CWISPPPFMLNDTQVNTEYMVNAITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFP--SI 121
Query: 271 ESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYV 330
S++ ++ A T L L + AL TA V
Sbjct: 122 RSKVDRLMAFAPDYKGT----VLAGPLDALAVSAPSVWQQTTGSALTTALRNAGGLTQIV 177
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Score = 41.8 bits (96), Expect = 1e-04
Identities = 11/80 (13%), Positives = 19/80 (23%), Gaps = 10/80 (12%)
Query: 382 GKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHY 441
+ + +P L I + D I P + L+P P H
Sbjct: 224 PPPSRAAELREVTVPTLVIQAEHDPIAPAPHGKHLAGLIPT--ARLAEI--PGMGHALPS 279
Query: 442 DLVGGRMAVEQVYPCIVQFL 461
+ I+
Sbjct: 280 S------VHGPLAEVILAHT 293
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} Length = 279 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Score = 40.7 bits (93), Expect = 2e-04
Identities = 15/81 (18%), Positives = 27/81 (33%), Gaps = 11/81 (13%)
Query: 384 FFYKDHIHKCNIPILAIAGDQDLICPPEAV-EETVKLLPEDLVTYKVFGEPSGPHYAHYD 442
+ + P L + G +D I P +A + +PE Y PH +
Sbjct: 209 RSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAVPE--ADYVEV--EGAPHGLLWT 264
Query: 443 LVGGRMAVEQVYPCIVQFLGR 463
++V + FL +
Sbjct: 265 ------HADEVNAALKTFLAK 279
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Score = 40.6 bits (93), Expect = 3e-04
Identities = 12/57 (21%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 384 FFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAH 440
+D +IP + + G D++CP ++ + K P+ ++ P+ H A
Sbjct: 245 QLLRDAHRIADIPGVIVHGRYDVVCPLQSAWDLHKAWPK--AQLQIS--PASGHSAF 297
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Score = 39.9 bits (91), Expect = 3e-04
Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 9/80 (11%)
Query: 384 FFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDL 443
++ + K ++P L I GD D I P E + L + KV+ PH
Sbjct: 201 TDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKG-AELKVY--KDAPHGFAVT- 256
Query: 444 VGGRMAVEQVYPCIVQFLGR 463
+Q+ ++ FL R
Sbjct: 257 -----HAQQLNEDLLAFLKR 271
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Score = 39.9 bits (91), Expect = 3e-04
Identities = 12/78 (15%), Positives = 23/78 (29%), Gaps = 10/78 (12%)
Query: 384 FFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDL 443
+ + +L G QD I P + K L V H+A +
Sbjct: 212 VIPPATLGRLPHDVLVFHGRQDRIVPLDTSLYLTKHLKH--AELVVL--DRCGHWAQLE- 266
Query: 444 VGGRMAVEQVYPCIVQFL 461
+ + P +++
Sbjct: 267 -----RWDAMGPMLMEHF 279
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Score = 39.9 bits (91), Expect = 4e-04
Identities = 9/57 (15%), Positives = 18/57 (31%), Gaps = 4/57 (7%)
Query: 384 FFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAH 440
++ +IP + + G D+ C + + K PE + H
Sbjct: 244 QLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAWPE--AELHIV--EGAGHSYD 296
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 290 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 39.5 bits (90), Expect = 5e-04
Identities = 19/134 (14%), Positives = 40/134 (29%), Gaps = 11/134 (8%)
Query: 331 FSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHI 390
+ N + ++ E VL + + + ++ E + + D I
Sbjct: 167 YQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKI 226
Query: 391 HKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAV 450
IP L G+ D + P A + + VF H ++
Sbjct: 227 SAIKIPTLITVGEYDEVTPNVA-RVIHEKIAG--SELHVF--RDCSHLTMWE------DR 275
Query: 451 EQVYPCIVQFLGRY 464
E + F+ ++
Sbjct: 276 EGYNKLLSDFILKH 289
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Score = 39.4 bits (90), Expect = 6e-04
Identities = 13/84 (15%), Positives = 25/84 (29%), Gaps = 10/84 (11%)
Query: 378 RDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPH 437
R + I L I G +D + P + +L+ VF H
Sbjct: 195 RWIDALASSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELIDR--AQLHVF--GRCGH 250
Query: 438 YAHYDLVGGRMAVEQVYPCIVQFL 461
+ + ++ +V+F
Sbjct: 251 WTQIE------QTDRFNRLVVEFF 268
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} Length = 310 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Score = 38.8 bits (88), Expect = 0.001
Identities = 7/78 (8%), Positives = 16/78 (20%), Gaps = 9/78 (11%)
Query: 384 FFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDL 443
+ N G +D + P+ + L+ H+
Sbjct: 239 EAISFWQNDWNGQTFMAIGMKDKLLGPDVMYPMKALIN-GCPEPLEI--ADAGHFVQEF- 294
Query: 444 VGGRMAVEQVYPCIVQFL 461
+ + F
Sbjct: 295 -----GEQVAREALKHFA 307
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Score = 38.0 bits (86), Expect = 0.001
Identities = 16/78 (20%), Positives = 31/78 (39%), Gaps = 9/78 (11%)
Query: 384 FFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDL 443
+ + + K ++P L + GD D + P EA L + T K++ PH
Sbjct: 203 TDFTEDLKKIDVPTLVVHGDADQVVPIEASGIASAALVKG-STLKIY--SGAPHGLTDT- 258
Query: 444 VGGRMAVEQVYPCIVQFL 461
+Q+ ++ F+
Sbjct: 259 -----HKDQLNADLLAFI 271
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Score = 37.8 bits (86), Expect = 0.002
Identities = 13/81 (16%), Positives = 21/81 (25%), Gaps = 13/81 (16%)
Query: 384 FFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDL 443
F + + +P+L G D + PP V L KV+ H
Sbjct: 248 FDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLETK-KELKVY--RYFGHEYI--- 301
Query: 444 VGGRMAVEQVYPCIVQFLGRY 464
+ F +
Sbjct: 302 -------PAFQTEKLAFFKQI 315
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} Length = 376 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Score = 37.5 bits (86), Expect = 0.003
Identities = 16/86 (18%), Positives = 26/86 (30%), Gaps = 11/86 (12%)
Query: 378 RDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPH 437
R R G + + P L I D + + E + +P V G H
Sbjct: 302 RGRAGSI--PEALAMITQPALIICARSDGLYSFDEHVEMGRSIPN--SRLCVVDTNEG-H 356
Query: 438 YAHYDLVGGRMAVEQVYPCIVQFLGR 463
M ++V + FL +
Sbjct: 357 DF------FVMEADKVNDAVRGFLDQ 376
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Score = 37.4 bits (85), Expect = 0.003
Identities = 14/65 (21%), Positives = 21/65 (32%), Gaps = 3/65 (4%)
Query: 373 REGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGE 432
+E + F + + IP L G D ICPP V +++
Sbjct: 241 KEEIVFRTLSYFDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNYYAGP-KEIRIY-- 297
Query: 433 PSGPH 437
P H
Sbjct: 298 PYNNH 302
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Score = 37.2 bits (85), Expect = 0.003
Identities = 7/51 (13%), Positives = 16/51 (31%), Gaps = 2/51 (3%)
Query: 387 KDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPH 437
D + ++P++A + D E V + + + H
Sbjct: 190 LDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSL--LGSSH 238
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Score = 37.0 bits (85), Expect = 0.003
Identities = 14/78 (17%), Positives = 23/78 (29%), Gaps = 9/78 (11%)
Query: 386 YKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLP--EDLVTYKVFGEPSGPHYAHYDL 443
+ L ++ D + PP E VK L + V Y G H +
Sbjct: 288 LTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYVELQSGEG-HDSFL-- 344
Query: 444 VGGRMAVEQVYPCIVQFL 461
+ + + FL
Sbjct: 345 ----LKNPKQIEILKGFL 358
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} Length = 279 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 36.8 bits (85), Expect = 0.003
Identities = 13/64 (20%), Positives = 24/64 (37%), Gaps = 5/64 (7%)
Query: 219 DFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIV 278
F + V + + K + G A+G S GG L A+ RC + ++
Sbjct: 56 SFFLNVNSQVTTVCQILAKDPKLQQG-YNAMGFSQGGQFLRAVAQRCPSP----PMVNLI 110
Query: 279 TLAS 282
++
Sbjct: 111 SVGG 114
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} Length = 405 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Score = 36.8 bits (84), Expect = 0.004
Identities = 32/241 (13%), Positives = 61/241 (25%), Gaps = 51/241 (21%)
Query: 217 DWDFDHYLE-EDVPAAMEYIRAQSKPK--------------DGKLLAIGHSMGGILLYAM 261
Y + + A ++++ +++ +GK+ G S G + Y
Sbjct: 153 FQTSGDYQQIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLGTMAYGA 212
Query: 262 LSRCGFEGRESRLAAIVTLASSLD-YTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAA 320
+ L I+ A Y + + P P + L+V +
Sbjct: 213 ATTG-----VEGLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALTYSRNLDG 267
Query: 321 YPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDR 380
L + +A D + + N+
Sbjct: 268 ADFLKGNAEYEKRLAEMTAALDRKSGDYNQFWHDRNYL---------------------- 305
Query: 381 GGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAH 440
+ K +L + G QD PE K LPE + Y +
Sbjct: 306 -------INTDKVKADVLIVHGLQDWNVTPEQAYNFWKALPEGHAKHAFLH-RGAHIYMN 357
Query: 441 Y 441
Sbjct: 358 S 358
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 468 | |||
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 99.89 | |
| d1j1ia_ | 268 | Meta cleavage compound hydrolase CarC {Janthinobac | 99.87 | |
| d1q0ra_ | 297 | Aclacinomycin methylesterase RdmC {Streptomyces pu | 99.86 | |
| d2rhwa1 | 283 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 99.85 | |
| d1mtza_ | 290 | Tricorn interacting factor F1 {Archaeon Thermoplas | 99.85 | |
| d1uk8a_ | 271 | Meta-cleavage product hydrolase CumD {Pseudomonas | 99.84 | |
| d3c70a1 | 256 | Hydroxynitrile lyase {Rubber tree (Hevea brasilien | 99.84 | |
| d1zd3a2 | 322 | Mammalian epoxide hydrolase, C-terminal domain {Hu | 99.83 | |
| d1c4xa_ | 281 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 99.83 | |
| d1bn7a_ | 291 | Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1 | 99.83 | |
| d1a8qa_ | 274 | Bromoperoxidase A1 {Streptomyces aureofaciens [Tax | 99.82 | |
| d1ehya_ | 293 | Bacterial epoxide hydrolase {Agrobacterium radioba | 99.82 | |
| d1brta_ | 277 | Bromoperoxidase A2 {Streptomyces aureofaciens [Tax | 99.81 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 99.81 | |
| d1hkha_ | 279 | Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] | 99.81 | |
| d1b6ga_ | 310 | Haloalkane dehalogenase {Xanthobacter autotrophicu | 99.8 | |
| d1m33a_ | 256 | Biotin biosynthesis protein BioH {Escherichia coli | 99.8 | |
| d1tqha_ | 242 | Carboxylesterase Est {Bacillus stearothermophilus | 99.79 | |
| d1a88a_ | 275 | Chloroperoxidase L {Streptomyces lividans [TaxId: | 99.77 | |
| d1imja_ | 208 | Ccg1/TafII250-interacting factor B (Cib) {Human (H | 99.77 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 99.77 | |
| d1a8sa_ | 273 | Chloroperoxidase F {Pseudomonas fluorescens [TaxId | 99.76 | |
| d1azwa_ | 313 | Proline iminopeptidase {Xanthomonas campestris, pv | 99.73 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 99.73 | |
| d1thta_ | 302 | Myristoyl-ACP-specific thioesterase {Vibrio harvey | 99.71 | |
| d1mj5a_ | 298 | Haloalkane dehalogenase {Sphingomonas paucimobilis | 99.7 | |
| d2fuka1 | 218 | XC6422 protein {Xanthomonas campestris [TaxId: 339 | 99.69 | |
| d1r3da_ | 264 | Hypothetical protein VC1974 {Vibrio cholerae [TaxI | 99.68 | |
| d1dina_ | 233 | Dienelactone hydrolase {Pseudomonas sp., B13 [TaxI | 99.64 | |
| d1wm1a_ | 313 | Proline aminopeptidase {Serratia marcescens [TaxId | 99.63 | |
| d1uxoa_ | 186 | Hypothetical protein YdeN {Bacillus subtilis [TaxI | 99.63 | |
| d1l7aa_ | 318 | Cephalosporin C deacetylase {Bacillus subtilis [Ta | 99.61 | |
| d2hu7a2 | 260 | Acylamino-acid-releasing enzyme, C-terminal donain | 99.59 | |
| d1jfra_ | 260 | Lipase {Streptomyces exfoliatus [TaxId: 1905]} | 99.57 | |
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 99.54 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 99.51 | |
| d1ufoa_ | 238 | Hypothetical protein TT1662 {Thermus thermophilus | 99.48 | |
| d1vlqa_ | 322 | Acetyl xylan esterase TM0077 {Thermotoga maritima | 99.43 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 99.43 | |
| d1fj2a_ | 229 | Acyl protein thioesterase 1 {Human (Homo sapiens) | 99.4 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 99.4 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 99.39 | |
| d1jmkc_ | 230 | Surfactin synthetase, SrfA {Bacillus subtilis [Tax | 99.39 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 99.39 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 99.38 | |
| d2h1ia1 | 202 | Carboxylesterase {Bacillus cereus [TaxId: 1396]} | 99.36 | |
| d2bgra2 | 258 | Dipeptidyl peptidase IV/CD26, C-terminal domain {P | 99.35 | |
| d1xfda2 | 258 | Dipeptidyl aminopeptidase-like protein 6, DPP6, C- | 99.33 | |
| d2i3da1 | 218 | Hypothetical protein Atu1826 {Agrobacterium tumefa | 99.28 | |
| d1xkta_ | 286 | Fatty acid synthase {Human (Homo sapiens) [TaxId: | 99.27 | |
| d2r8ba1 | 203 | Uncharacterized protein Atu2452 {Agrobacterium tum | 99.22 | |
| d3b5ea1 | 209 | Uncharacterized protein Mll8374 {Mesorhizobium lot | 99.22 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 99.08 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 99.0 | |
| d2pbla1 | 261 | Uncharacterized protein TM1040_2492 {Silicibacter | 98.89 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 98.86 | |
| d1mo2a_ | 255 | Erythromycin polyketide synthase {Saccharopolyspor | 98.83 | |
| d1tcaa_ | 317 | Triacylglycerol lipase {Yeast (Candida antarctica) | 98.81 | |
| d1qlwa_ | 318 | A novel bacterial esterase {Alcaligenes sp. [TaxId | 98.76 | |
| d1cvla_ | 319 | Lipase {Chromobacterium viscosum [TaxId: 42739]} | 98.66 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 98.65 | |
| d1ju3a2 | 347 | Bacterial cocaine esterase N-terminal domain {Rhod | 98.62 | |
| d1ex9a_ | 285 | Lipase {Pseudomonas aeruginosa [TaxId: 287]} | 98.61 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 98.61 | |
| d1jjia_ | 311 | Carboxylesterase {Archaeon Archaeoglobus fulgidus | 98.46 | |
| d1lzla_ | 317 | Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | 98.46 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 98.38 | |
| d1qfma2 | 280 | Prolyl oligopeptidase, C-terminal domain {Pig (Sus | 98.37 | |
| d2dsta1 | 122 | Hypothetical protein TTHA1544 {Thermus thermophilu | 98.37 | |
| d1u4na_ | 308 | Carboxylesterase {Alicyclobacillus acidocaldarius | 98.17 | |
| d1sfra_ | 288 | Antigen 85a {Mycobacterium tuberculosis [TaxId: 17 | 98.16 | |
| d2d81a1 | 318 | Polyhydroxybutyrate depolymerase {Penicillium funi | 98.13 | |
| d1jjfa_ | 255 | Feruloyl esterase domain of the cellulosomal xylan | 98.03 | |
| d1dqza_ | 280 | Antigen 85c {Mycobacterium tuberculosis [TaxId: 17 | 98.01 | |
| d3c8da2 | 246 | Enterochelin esterase, catalytic domain {Shigella | 97.83 | |
| d1ei9a_ | 279 | Palmitoyl protein thioesterase 1 {Cow (Bos taurus) | 97.52 | |
| d2gzsa1 | 265 | Enterobactin and salmochelin hydrolase IroE {Esche | 97.48 | |
| d1r88a_ | 267 | Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta | 97.46 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 97.25 | |
| d1pv1a_ | 299 | Hypothetical esterase YJL068C {Baker's yeast (Sacc | 97.06 | |
| d1rp1a2 | 337 | Pancreatic lipase, N-terminal domain {Dog (Canis f | 97.04 | |
| d1bu8a2 | 338 | Pancreatic lipase, N-terminal domain {Rat (Rattus | 96.94 | |
| d1wb4a1 | 273 | Feruloyl esterase domain of the cellulosomal xylan | 95.87 | |
| d1tiba_ | 269 | Triacylglycerol lipase {Thermomyces lanuginosus, f | 95.39 | |
| d1uwca_ | 261 | Feruloyl esterase A {Aspergillus niger [TaxId: 506 | 95.33 | |
| d1tiaa_ | 271 | Triacylglycerol lipase {Penicillium camembertii [T | 95.18 | |
| d1lgya_ | 265 | Triacylglycerol lipase {Rhizopus niveus [TaxId: 48 | 94.0 | |
| d3tgla_ | 265 | Triacylglycerol lipase {Rhizomucor miehei [TaxId: | 93.66 | |
| d1cexa_ | 197 | Cutinase {Fungus (Fusarium solani), subsp. pisi [T | 90.59 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 90.08 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 87.31 | |
| d1wpxa1 | 421 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 87.3 | |
| d1ivya_ | 452 | Human 'protective protein', HPP {Human (Homo sapie | 86.78 | |
| d1qoza_ | 207 | Acetylxylan esterase {Trichoderma reesei [TaxId: 5 | 86.47 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 85.84 | |
| d1g66a_ | 207 | Acetylxylan esterase {Penicillium purpurogenum [Ta | 85.59 | |
| d1qe3a_ | 483 | Thermophilic para-nitrobenzyl esterase (PNB estera | 85.17 | |
| d1thga_ | 544 | Type-B carboxylesterase/lipase {Fungus (Geotrichum | 82.93 | |
| d2h7ca1 | 532 | Mammalian carboxylesterase (liver carboxylesterase | 80.63 | |
| d1p0ia_ | 526 | Butyryl cholinesterase {Human (Homo sapiens) [TaxI | 80.46 |
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.89 E-value=1.3e-22 Score=199.65 Aligned_cols=273 Identities=17% Similarity=0.186 Sum_probs=170.1
Q ss_pred hhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEE
Q 012210 171 RDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIG 250 (468)
Q Consensus 171 ~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvG 250 (468)
..+++.|+ .+||+|+++|++|++..-..... .......+++++++++.+|+.+++++++...+.+ +++++|
T Consensus 81 ~sla~~L~---~~Gy~V~~~D~rG~G~S~~~~~~----~~~~~~~~~~~~~~~~~~Dl~~~i~~i~~~~g~~--~v~lvG 151 (377)
T d1k8qa_ 81 NSLAFILA---DAGYDVWLGNSRGNTWARRNLYY----SPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQD--KLHYVG 151 (377)
T ss_dssp TCHHHHHH---HTTCEEEECCCTTSTTSCEESSS----CTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCS--CEEEEE
T ss_pred chHHHHHH---HCCCEEEEEcCCCCCCCCCCCCC----CCcchhhccCCHHHHhhhhHHHHHHHHHHHcCCC--CEEEEE
Confidence 56889999 99999999999999764221111 0111122456788888899999999999998876 999999
Q ss_pred EehhHHHHHHHHHhcCCCCCcccccceeEEccccccCC---chhhHHhhcccCchhh-h-----cCCCCcchHhHHHHhc
Q 012210 251 HSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTS---SKSTLKLLLPLADPAQ-A-----LNVPVVPLGALLTAAY 321 (468)
Q Consensus 251 hS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~---~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~ 321 (468)
|||||++++.+|..+ |+.+++++++........ .......+........ . ...+............
T Consensus 152 hS~GG~ia~~~a~~~-----p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (377)
T d1k8qa_ 152 HSQGTTIGFIAFSTN-----PKLAKRIKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEV 226 (377)
T ss_dssp ETHHHHHHHHHHHHC-----HHHHTTEEEEEEESCCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHT
T ss_pred ecchHHHHHHHHHhh-----hhhhhhceeEeeccccccccchhhHHHHHHhcchhhhhhhhhhhhccchhHHHHhhhhhh
Confidence 999999999999998 888888887754333221 1111111111110000 0 0011111111111111
Q ss_pred CC-CCCchhHHHHHHHhhhc-cccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCc------------cccc
Q 012210 322 PL-SSSPPYVFSWLNNLISA-EDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGK------------FFYK 387 (468)
Q Consensus 322 ~~-~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~ 387 (468)
.. .........+....... ....+......+............+.++.+.+..+.+..+... ....
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (377)
T d1k8qa_ 227 CSRETVDLLCSNALFIICGFDTMNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPY 306 (377)
T ss_dssp TTBTTTHHHHHHHHHHHHCCCGGGSCGGGHHHHHTTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCB
T ss_pred cchhhhhHHHHhhhhhhcCCCcccccHHHhhhhhhcccccchHHHHHHHHHHHhcCcchhccchhhhhhhhhhcccCchh
Confidence 11 11111111111111111 1122333444444444555566777777777766665544321 1123
Q ss_pred cccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 388 DHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 388 ~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
..+.+|+||+|+|+|++|.++|++.++++.+.+|+. ++++++ ++++|++++++.+++++|++.|++||++
T Consensus 307 ~~l~~i~vPvL~i~G~~D~~~~~~~~~~l~~~lp~~-~~~~~i-----~~~GH~d~~~~~~a~~~v~~~I~~fl~~ 376 (377)
T d1k8qa_ 307 YNLTDMHVPIAVWNGGNDLLADPHDVDLLLSKLPNL-IYHRKI-----PPYNHLDFIWAMDAPQAVYNEIVSMMGT 376 (377)
T ss_dssp CCGGGCCSCEEEEEETTCSSSCHHHHHHHHTTCTTE-EEEEEE-----TTCCTTHHHHCTTHHHHTHHHHHHHHHT
T ss_pred hhHhhCCCCEEEEEeCCCCccCHHHHHHHHHHCCCC-eEEEEe-----CCCCCcchhhccchHHHHHHHHHHHHhc
Confidence 367899999999999999999999999999999984 456666 4556777788889999999999999986
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Probab=99.87 E-value=7.9e-22 Score=184.76 Aligned_cols=220 Identities=15% Similarity=0.224 Sum_probs=134.7
Q ss_pred hcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHH
Q 012210 182 EEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAM 261 (468)
Q Consensus 182 ~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~ 261 (468)
.+||+|+++|+.|++..-. ...+++.++++ +|+.++++.+... .+++++||||||.+++.+
T Consensus 49 ~~~~~v~~~D~~G~G~S~~-------------~~~~~~~~~~~-~~~~~~i~~l~~~-----~~~~liG~S~Gg~ia~~~ 109 (268)
T d1j1ia_ 49 ARHYRVIAMDMLGFGKTAK-------------PDIEYTQDRRI-RHLHDFIKAMNFD-----GKVSIVGNSMGGATGLGV 109 (268)
T ss_dssp TTTSEEEEECCTTSTTSCC-------------CSSCCCHHHHH-HHHHHHHHHSCCS-----SCEEEEEEHHHHHHHHHH
T ss_pred hcCCEEEEEcccccccccC-------------Ccccccccccc-ccchhhHHHhhhc-----ccceeeeccccccccchh
Confidence 4799999999999976311 11244566776 8888877765321 379999999999999999
Q ss_pred HHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCchhHHHHHHHhhhcc
Q 012210 262 LSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAE 341 (468)
Q Consensus 262 a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 341 (468)
|.++ |++|+++|+++++............... .... . ..............
T Consensus 110 a~~~-----p~~v~~lil~~~~~~~~~~~~~~~~~~~---------~~~~--~-------------~~~~~~~~~~~~~~ 160 (268)
T d1j1ia_ 110 SVLH-----SELVNALVLMGSAGLVVEIHEDLRPIIN---------YDFT--R-------------EGMVHLVKALTNDG 160 (268)
T ss_dssp HHHC-----GGGEEEEEEESCCBCCCC-------------------CCSC--H-------------HHHHHHHHHHSCTT
T ss_pred hccC-----hHhhheeeecCCCccccccchhhhhhhh---------hhhh--h-------------hhhHHHHHHHhhhh
Confidence 9998 9999999999886554332211111100 0000 0 00001111111111
Q ss_pred ccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecCCCCcCCHHHHHHHHHhCC
Q 012210 342 DMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLP 421 (468)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip 421 (468)
..............................+.. ........+.+.+|++|+|+|+|++|.++|++.++.+.+.+|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~ 235 (268)
T d1j1ia_ 161 FKIDDAMINSRYTYATDEATRKAYVATMQWIRE-----QGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLID 235 (268)
T ss_dssp CCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHH-----HTSSBCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCT
T ss_pred hhhhhhhhHHHHHhhhhhhhhhhhhhhhhhhhc-----cccccchhhhHhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCC
Confidence 111222222111111111111111111111111 001112235678899999999999999999999999999999
Q ss_pred CCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 422 EDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 422 ~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
++ +++++ +++||+.|.| +|++|.+.|.+||.++
T Consensus 236 ~~--~~~~~--~~~gH~~~~e------~p~~~~~~i~~FL~~r 268 (268)
T d1j1ia_ 236 DS--WGYII--PHCGHWAMIE------HPEDFANATLSFLSLR 268 (268)
T ss_dssp TE--EEEEE--SSCCSCHHHH------SHHHHHHHHHHHHHHC
T ss_pred CC--EEEEE--CCCCCchHHh------CHHHHHHHHHHHHcCC
Confidence 86 88888 9999999998 8999999999999864
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Probab=99.86 E-value=1.9e-20 Score=178.21 Aligned_cols=245 Identities=13% Similarity=0.155 Sum_probs=143.9
Q ss_pred hHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEE
Q 012210 172 DLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGH 251 (468)
Q Consensus 172 ~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGh 251 (468)
.++..|+ .+||+|+++|++|++..-... ....+|++.+++ +|+.++++.+.. + +++++||
T Consensus 41 ~~~~~l~---~~g~~vi~~D~~G~G~S~~~~----------~~~~~~~~~~~~-~d~~~ll~~l~~----~--~~~lvGh 100 (297)
T d1q0ra_ 41 EFARRLA---DGGLHVIRYDHRDTGRSTTRD----------FAAHPYGFGELA-ADAVAVLDGWGV----D--RAHVVGL 100 (297)
T ss_dssp HHHHHHH---TTTCEEEEECCTTSTTSCCCC----------TTTSCCCHHHHH-HHHHHHHHHTTC----S--SEEEEEE
T ss_pred HHHHHHH---hCCCEEEEEeCCCCccccccc----------ccccccccchhh-hhhccccccccc----c--ceeeccc
Confidence 4566666 899999999999997631110 011245677876 888888877643 3 8999999
Q ss_pred ehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhc-CCCCCchhH
Q 012210 252 SMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAY-PLSSSPPYV 330 (468)
Q Consensus 252 S~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 330 (468)
||||.+++.+|..+ |++|+++|+++++.................................+.... +.......+
T Consensus 101 S~Gg~~a~~~a~~~-----P~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (297)
T d1q0ra_ 101 SMGATITQVIALDH-----HDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFLDALALMNQPAEGRAAEV 175 (297)
T ss_dssp THHHHHHHHHHHHC-----GGGEEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSCCCCHHHHHHHHHHHSCCCSHHHHH
T ss_pred cccchhhhhhhccc-----ccceeeeEEEccccccccchhhhHHHhhhhhhhhhhhhhhHHHHHHHHHhccccchhhHHH
Confidence 99999999999998 999999999988665444322221111000000000000000011111111 010000000
Q ss_pred HHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHH-HHhc-Ccc-cc-------cCCccccccccCccCccEEEE
Q 012210 331 FSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTT-AFRE-GGL-RD-------RGGKFFYKDHIHKCNIPILAI 400 (468)
Q Consensus 331 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~-~~-------~~~~~~~~~~l~~I~vPvLiI 400 (468)
...+.. ..................+.. .... ..+ .. .....+....+.+|++|||+|
T Consensus 176 ~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlvi 242 (297)
T d1q0ra_ 176 AKRVSK-------------WRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAAELREVTVPTLVI 242 (297)
T ss_dssp HHHHHH-------------HHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCCCGGGGCCCCCGGGGGGGGGCCSCEEEE
T ss_pred HHHHHH-------------HhhhccccccchHHHHHHHHHHhhhhccccchhhhhhhhhhhccccchhhhhccCCceEEE
Confidence 000000 000011111111221111111 1110 000 00 011223455788999999999
Q ss_pred ecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 401 AGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 401 ~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
+|++|.++|++.++++.+.+|++ +++++ +++||+.|.+ .|+++.+.|.+||++.
T Consensus 243 ~G~~D~~~~~~~~~~~~~~~p~~--~~~~i--~~~gH~~~~e------~p~~~~~~i~~~l~~~ 296 (297)
T d1q0ra_ 243 QAEHDPIAPAPHGKHLAGLIPTA--RLAEI--PGMGHALPSS------VHGPLAEVILAHTRSA 296 (297)
T ss_dssp EETTCSSSCTTHHHHHHHTSTTE--EEEEE--TTCCSSCCGG------GHHHHHHHHHHHHHHT
T ss_pred EeCCCCCCCHHHHHHHHHhCCCC--EEEEE--CCCCCcchhh------CHHHHHHHHHHHHHhh
Confidence 99999999999999999999987 88888 9999999998 9999999999999864
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Probab=99.85 E-value=9.6e-21 Score=179.17 Aligned_cols=246 Identities=13% Similarity=0.120 Sum_probs=145.4
Q ss_pred ccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcC
Q 012210 161 RQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSK 240 (468)
Q Consensus 161 ~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~ 240 (468)
|++.+-...+..+.+.++.++..||.|+++|+.|++....... ..+....++ +|+.++++++..
T Consensus 37 HG~~~~~~~~~~~~~~l~~~~~~g~~v~~~D~~G~G~S~~~~~------------~~~~~~~~~-~~i~~li~~l~~--- 100 (283)
T d2rhwa1 37 HGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVM------------DEQRGLVNA-RAVKGLMDALDI--- 100 (283)
T ss_dssp CCCSTTCCHHHHHTTTHHHHHHTTCEEEEECCTTSTTSCCCCC------------SSCHHHHHH-HHHHHHHHHHTC---
T ss_pred CCCCCChhHHHHHHHHHHHHHHCCCEEEEEeCCCCcccccccc------------cccccchhh-hhcccccccccc---
Confidence 3333333444444455555558999999999999976321110 011233444 777777777633
Q ss_pred CCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHh
Q 012210 241 PKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAA 320 (468)
Q Consensus 241 ~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (468)
+ +++++||||||.+++.+|.++ |++|+++|+++|........... +......+....
T Consensus 101 -~--~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lil~~~~~~~~~~~~~~---------------~~~~~~~~~~~~ 157 (283)
T d2rhwa1 101 -D--RAHLVGNAMGGATALNFALEY-----PDRIGKLILMGPGGLGPSMFAPM---------------PMEGIKLLFKLY 157 (283)
T ss_dssp -C--CEEEEEETHHHHHHHHHHHHC-----GGGEEEEEEESCSCCCCCSSSCS---------------SCHHHHHHHHHH
T ss_pred -c--ccccccccchHHHHHHHHHHh-----hhhcceEEEeCCCcCCcchhhhh---------------hHHHHHHHHHHh
Confidence 3 999999999999999999998 89999999998754322110000 000000000000
Q ss_pred cCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEE
Q 012210 321 YPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAI 400 (468)
Q Consensus 321 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI 400 (468)
.. . ........+............+......... ...+............. . ....+....+.+|++|+|+|
T Consensus 158 ~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~----~~~~~~~~~l~~i~~P~lii 229 (283)
T d2rhwa1 158 AE-P-SYETLKQMLQVFLYDQSLITEELLQGRWEAI-QRQPEHLKNFLISAQKA-P----LSTWDVTARLGEIKAKTFIT 229 (283)
T ss_dssp HS-C-CHHHHHHHHHHHCSCGGGCCHHHHHHHHHHH-HHCHHHHHHHHHHHHHS-C----GGGGCCGGGGGGCCSCEEEE
T ss_pred hh-h-hhhhHHHHHHHhhcccccCcHHHHHHHHHHh-hhhhhhhhhhhhhhhhh-h----ccccchHHHHhhCCCCEEEE
Confidence 00 0 0011111222222222222333332222111 11111111111111111 1 11233456788999999999
Q ss_pred ecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 401 AGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 401 ~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
+|++|.++|++.++++.+.+++. +++++ +++||+.|.| .|+++.+.|.+||++
T Consensus 230 ~G~~D~~~~~~~~~~~~~~~~~~--~~~~i--~~~gH~~~~e------~p~~~~~~i~~FLk~ 282 (283)
T d2rhwa1 230 WGRDDRFVPLDHGLKLLWNIDDA--RLHVF--SKCGHWAQWE------HADEFNRLVIDFLRH 282 (283)
T ss_dssp EETTCSSSCTHHHHHHHHHSSSE--EEEEE--SSCCSCHHHH------THHHHHHHHHHHHHH
T ss_pred EeCCCCCcCHHHHHHHHHhCCCC--EEEEE--CCCCCchHHh------CHHHHHHHHHHHHhC
Confidence 99999999999999999999976 88888 9999999998 899999999999975
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.85 E-value=4.8e-21 Score=180.24 Aligned_cols=253 Identities=15% Similarity=0.180 Sum_probs=144.4
Q ss_pred cccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHh
Q 012210 158 LERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRA 237 (468)
Q Consensus 158 l~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~ 237 (468)
+-.|++-|-..........++ .+||+|+++|++|++..... ...++++++++ +|+.++++++..
T Consensus 29 v~lHG~~g~~~~~~~~~~~~~---~~~~~vi~~D~~G~G~S~~~------------~~~~~~~~~~~-~~l~~ll~~l~~ 92 (290)
T d1mtza_ 29 MTMHGGPGMSHDYLLSLRDMT---KEGITVLFYDQFGCGRSEEP------------DQSKFTIDYGV-EEAEALRSKLFG 92 (290)
T ss_dssp EEECCTTTCCSGGGGGGGGGG---GGTEEEEEECCTTSTTSCCC------------CGGGCSHHHHH-HHHHHHHHHHHT
T ss_pred EEECCCCCchHHHHHHHHHHH---HCCCEEEEEeCCCCcccccc------------ccccccccchh-hhhhhhhccccc
Confidence 443444444444444444444 89999999999999763211 11245677776 899888888753
Q ss_pred hcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHH
Q 012210 238 QSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALL 317 (468)
Q Consensus 238 ~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (468)
. +++++|||||||.+++.+|.++ |++|+++|++++.............+...... .....+
T Consensus 93 ~-----~~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~ 153 (290)
T d1mtza_ 93 N-----EKVFLMGSSYGGALALAYAVKY-----QDHLKGLIVSGGLSSVPLTVKEMNRLIDELPA---------KYRDAI 153 (290)
T ss_dssp T-----CCEEEEEETHHHHHHHHHHHHH-----GGGEEEEEEESCCSBHHHHHHHHHHHHHTSCH---------HHHHHH
T ss_pred c-----cccceecccccchhhhhhhhcC-----hhhheeeeecccccCcccchhhhhhhhhhhhH---------HHHHHH
Confidence 2 3899999999999999999998 99999999998765432211111111000000 000000
Q ss_pred HHhc-C-CCCCchh---HHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhc-Cc--ccccCCccccccc
Q 012210 318 TAAY-P-LSSSPPY---VFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFRE-GG--LRDRGGKFFYKDH 389 (468)
Q Consensus 318 ~~~~-~-~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~ 389 (468)
.... . ....+.+ ...+............++......... .......... .. ........++...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (290)
T d1mtza_ 154 KKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAE--------RRNVYRIMNGPNEFTITGTIKDWDITDK 225 (290)
T ss_dssp HHHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHH--------HSSHHHHHTCSBTTBCCSTTTTCBCTTT
T ss_pred HHhhhhccccchhHHHHHHHHhhhhhcccccchHHHHHHHHHHh--------hhhhhhhhcchhHHhHhhhhhcccHHHH
Confidence 0000 0 0000000 000000000011111111111110000 0000000000 00 0111112234567
Q ss_pred cCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 390 IHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 390 l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
+.+|++|+|+|+|++|.++| +.++.+.+.+|++ +++++ +++||+.|.| +|+++.+.|.+||.+|
T Consensus 226 ~~~i~~P~l~i~G~~D~~~~-~~~~~~~~~~~~~--~~~~~--~~~gH~~~~e------~p~~~~~~i~~FL~~h 289 (290)
T d1mtza_ 226 ISAIKIPTLITVGEYDEVTP-NVARVIHEKIAGS--ELHVF--RDCSHLTMWE------DREGYNKLLSDFILKH 289 (290)
T ss_dssp GGGCCSCEEEEEETTCSSCH-HHHHHHHHHSTTC--EEEEE--TTCCSCHHHH------SHHHHHHHHHHHHHTC
T ss_pred hhcccceEEEEEeCCCCCCH-HHHHHHHHHCCCC--EEEEE--CCCCCchHHh------CHHHHHHHHHHHHHHh
Confidence 88899999999999998764 6788999999987 88888 9999999998 8999999999999987
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.84 E-value=6.2e-21 Score=178.88 Aligned_cols=221 Identities=15% Similarity=0.188 Sum_probs=129.7
Q ss_pred hcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHH
Q 012210 182 EEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAM 261 (468)
Q Consensus 182 ~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~ 261 (468)
..||+|+++|+.|++..-... ...+..+++. +++..+++.+ +.+ +++++||||||.+++.+
T Consensus 50 ~~~~~vi~~Dl~G~G~S~~~~------------~~~~~~~~~~-~~~~~~~~~l----~~~--~~~lvG~S~Gg~ia~~~ 110 (271)
T d1uk8a_ 50 SKFYRVIAPDMVGFGFTDRPE------------NYNYSKDSWV-DHIIGIMDAL----EIE--KAHIVGNAFGGGLAIAT 110 (271)
T ss_dssp TTTSEEEEECCTTSTTSCCCT------------TCCCCHHHHH-HHHHHHHHHT----TCC--SEEEEEETHHHHHHHHH
T ss_pred hCCCEEEEEeCCCCCCccccc------------cccccccccc-hhhhhhhhhh----cCC--CceEeeccccceeehHH
Confidence 479999999999997631100 1122344443 5555555544 444 99999999999999999
Q ss_pred HHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCchhHHHHHHHhhhcc
Q 012210 262 LSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAE 341 (468)
Q Consensus 262 a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 341 (468)
|.++ |.++.++|+++++.................. ........+.......
T Consensus 111 a~~~-----p~~~~~lil~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~ 161 (271)
T d1uk8a_ 111 ALRY-----SERVDRMVLMGAAGTRFDVTEGLNAVWGYTP------------------------SIENMRNLLDIFAYDR 161 (271)
T ss_dssp HHHC-----GGGEEEEEEESCCCSCCCCCHHHHHHHTCCS------------------------CHHHHHHHHHHHCSCG
T ss_pred HHhh-----hccchheeecccCCCcccchhhhhhhhhccc------------------------hhHHHHHHHHHHhhhc
Confidence 9998 9999999999886554332222211111000 0000001111111111
Q ss_pred ccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecCCCCcCCHHHHHHHHHhCC
Q 012210 342 DMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLP 421 (468)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip 421 (468)
........................ .....................+.++++|+|+|+|++|.++|++..+.+.+.++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~ 238 (271)
T d1uk8a_ 162 SLVTDELARLRYEASIQPGFQESF---SSMFPEPRQRWIDALASSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELID 238 (271)
T ss_dssp GGCCHHHHHHHHHHHTSTTHHHHH---HTTSCSSTHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCT
T ss_pred ccchhHHHHHHHhhhhchhHHHHH---HhhcchhhhhhhhhccccHHHHHhhccceeEEecCCCCCcCHHHHHHHHHhCC
Confidence 111122111111111111000000 00000000000000011234678899999999999999999999999999999
Q ss_pred CCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 422 EDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 422 ~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
++ +++++ +++||+.|.+ .|+++.+.|.+||++
T Consensus 239 ~~--~~~~~--~~~gH~~~~e------~p~~~~~~i~~Fl~e 270 (271)
T d1uk8a_ 239 RA--QLHVF--GRCGHWTQIE------QTDRFNRLVVEFFNE 270 (271)
T ss_dssp TE--EEEEE--SSCCSCHHHH------THHHHHHHHHHHHHT
T ss_pred CC--EEEEE--CCCCCchHHH------CHHHHHHHHHHHHhc
Confidence 86 88888 9999999998 999999999999986
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Probab=99.84 E-value=1.6e-20 Score=172.94 Aligned_cols=245 Identities=16% Similarity=0.107 Sum_probs=142.8
Q ss_pred ccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcC
Q 012210 161 RQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSK 240 (468)
Q Consensus 161 ~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~ 240 (468)
|++.+-...++.++..|+ .+||+|+++|+.|+|..-... ...+++++++ +|+.++++.+..
T Consensus 9 HG~~~~~~~w~~~~~~L~---~~g~~Via~Dl~G~G~S~~~~------------~~~~~~~~~~-~~l~~~~~~~~~--- 69 (256)
T d3c70a1 9 HTICHGAWIWHKLKPLLE---ALGHKVTALDLAASGVDPRQI------------EEIGSFDEYS-EPLLTFLEALPP--- 69 (256)
T ss_dssp CCTTCCGGGGTTHHHHHH---HTTCEEEEECCTTSTTCSCCG------------GGCCSHHHHT-HHHHHHHHHSCT---
T ss_pred CCCCCCHHHHHHHHHHHH---hCCCEEEEEcCCCCCCCCCCC------------CCCCCHHHHH-HHhhhhhhhhcc---
Confidence 344444455688889998 899999999999997631100 1134566775 777777655432
Q ss_pred CCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHh
Q 012210 241 PKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAA 320 (468)
Q Consensus 241 ~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (468)
. ++++++||||||.+++.++..+ |++|+++|+++++............. . ....
T Consensus 70 ~--~~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~------------------~-~~~~ 123 (256)
T d3c70a1 70 G--EKVILVGESCGGLNIAIAADKY-----CEKIAAAVFHNSVLPDTEHCPSYVVD------------------K-LMEV 123 (256)
T ss_dssp T--CCEEEEEETTHHHHHHHHHHHH-----GGGEEEEEEESCCCCCSSSCTTHHHH------------------H-HHHH
T ss_pred c--cceeecccchHHHHHHHHhhcC-----chhhhhhheeccccCCcccchhhHhh------------------h-hhhh
Confidence 2 4899999999999999999998 89999999998765433221100000 0 0000
Q ss_pred cCCCCCchhHHHHHHH-hhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhc--CcccccCCccccccccCccCccE
Q 012210 321 YPLSSSPPYVFSWLNN-LISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFRE--GGLRDRGGKFFYKDHIHKCNIPI 397 (468)
Q Consensus 321 ~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~I~vPv 397 (468)
.......... ..... ................... ... ............ ..+...............+++|+
T Consensus 124 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 198 (256)
T d3c70a1 124 FPDWKDTTYF-TYTKDGKEITGLKLGFTLLRENLYT---LCG-PEEYELAKMLTRKGSLFQNILAKRPFFTKEGYGSIKK 198 (256)
T ss_dssp SCCCTTCEEE-EEEETTEEEEEEECCHHHHHHHTST---TSC-HHHHHHHHHHCCCBCCCHHHHTTSCCCCTTTGGGSCE
T ss_pred hhhhhhhHHH-hhhccccccchhhhhhhhhhhhhhh---hcc-hhhHHHhhhhhhhhhHHHhhhhhcchhhhhhccccce
Confidence 0000000000 00000 0000000111111111100 000 000000011000 00000001111233456678999
Q ss_pred EEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 398 LAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 398 LiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
++|+|++|.++|++..+++.+.+|+. +++++ +++||+.|++ .|+++.+.|.+|+++++
T Consensus 199 l~i~G~~D~~~~~~~~~~~~~~~p~~--~~~~i--~~agH~~~~e------~P~~~~~~l~~~~~~~~ 256 (256)
T d3c70a1 199 IYVWTDQDEIFLPEFQLWQIENYKPD--KVYKV--EGGDHKLQLT------KTKEIAEILQEVADTYN 256 (256)
T ss_dssp EEEECTTCSSSCHHHHHHHHHHSCCS--EEEEC--CSCCSCHHHH------SHHHHHHHHHHHHHHCC
T ss_pred eEEeecCCCCCCHHHHHHHHHHCCCC--EEEEE--CCCCCchHHh------CHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999987 78888 9999999998 99999999999998864
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.83 E-value=9.2e-21 Score=182.30 Aligned_cols=260 Identities=15% Similarity=0.167 Sum_probs=146.2
Q ss_pred ccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcC
Q 012210 161 RQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSK 240 (468)
Q Consensus 161 ~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~ 240 (468)
|++.+-...++.++..|+ .+||+|+++|++|++..... ....++++++++ +|+.++++.+..
T Consensus 39 HG~~~~~~~~~~~~~~L~---~~g~~vi~~D~~G~G~S~~~-----------~~~~~~~~~~~~-~~i~~l~~~l~~--- 100 (322)
T d1zd3a2 39 HGFPESWYSWRYQIPALA---QAGYRVLAMDMKGYGESSAP-----------PEIEEYCMEVLC-KEMVTFLDKLGL--- 100 (322)
T ss_dssp CCTTCCGGGGTTHHHHHH---HTTCEEEEEECTTSTTSCCC-----------SCGGGGSHHHHH-HHHHHHHHHHTC---
T ss_pred CCCCCCHHHHHHHHHHHH---HCCCEEEEeccccccccccc-----------cccccccccccc-hhhhhhhhcccc---
Confidence 344344445577788887 89999999999999753111 011234666776 888888877643
Q ss_pred CCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCch-hhHHhhccc--CchhhhcCCCCcchHhHH
Q 012210 241 PKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSK-STLKLLLPL--ADPAQALNVPVVPLGALL 317 (468)
Q Consensus 241 ~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 317 (468)
+ +++++||||||.+++.+|.++ |++|.++|+++++....... ......... .........+......+.
T Consensus 101 -~--~~~lvGhS~Gg~va~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (322)
T d1zd3a2 101 -S--QAVFIGHDWGGMLVWYMALFY-----PERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLYFQEPGVAEAELE 172 (322)
T ss_dssp -S--CEEEEEETHHHHHHHHHHHHC-----TTTEEEEEEESCCCCCCCSSSCHHHHHHTCGGGHHHHHTTSTTHHHHHHH
T ss_pred -c--ccccccccchHHHHHHHHHhC-----CccccceEEEcccccccccccchhhhhhccchhhhHHhhhccchhhhhhh
Confidence 2 999999999999999999998 89999999998754332211 111111000 000000000000000000
Q ss_pred HHhcCCCCCchhHHHHHHHhhhccc--cCCHHHHHHHHhhc---------cCCCcHHHHHHHHHHHhcCcccc----cC-
Q 012210 318 TAAYPLSSSPPYVFSWLNNLISAED--MMHPELLKKLVLNN---------FCTIPAKLILQLTTAFREGGLRD----RG- 381 (468)
Q Consensus 318 ~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~----~~- 381 (468)
.. ....+..++.... .............. ...........+.+.+....+.. +.
T Consensus 173 ~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (322)
T d1zd3a2 173 QN----------LSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRN 242 (322)
T ss_dssp HT----------HHHHHHHHSCCTTSCCCCTTSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHHHHTTHHHHHTTSC
T ss_pred hh----------HHHHHHHHhhccchhhhhHHHHhhhhccccccccchhhhhhccHHHHHHHHHHHhhcccccccccccc
Confidence 00 0000111000000 00000000000000 00001111111111111000000 00
Q ss_pred ----CccccccccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHH
Q 012210 382 ----GKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCI 457 (468)
Q Consensus 382 ----~~~~~~~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I 457 (468)
..........+|++|||+|+|++|.+++++..+.+.+.+|+. +++++ +++||+.|.| +|++|.+.|
T Consensus 243 ~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~--~~~~i--~~~gH~~~~e------~p~~v~~~i 312 (322)
T d1zd3a2 243 MERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPHL--KRGHI--EDCGHWTQMD------KPTEVNQIL 312 (322)
T ss_dssp HHHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTCTTC--EEEEE--TTCCSCHHHH------SHHHHHHHH
T ss_pred cccccccchhhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCC--EEEEE--CCCCCchHHh------CHHHHHHHH
Confidence 011223456789999999999999999999999999999987 88888 9999999998 999999999
Q ss_pred HHHHhhccC
Q 012210 458 VQFLGRYDS 466 (468)
Q Consensus 458 ~~FL~~~~~ 466 (468)
.+||+++.+
T Consensus 313 ~~FL~~~~~ 321 (322)
T d1zd3a2 313 IKWLDSDAR 321 (322)
T ss_dssp HHHHHHHTC
T ss_pred HHHHhhcCC
Confidence 999998865
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Probab=99.83 E-value=2.4e-20 Score=176.46 Aligned_cols=234 Identities=15% Similarity=0.196 Sum_probs=132.9
Q ss_pred hhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEE
Q 012210 170 IRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAI 249 (468)
Q Consensus 170 i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lv 249 (468)
++.+...|+ +||+|+++|++|++..-..... ..+ ..+..++++ +|+.++++.+. .+ +++++
T Consensus 45 ~~~~~~~L~----~~~~vi~~D~~G~G~S~~~~~~----~~~----~~~~~~~~~-~~i~~~i~~~~----~~--~~~lv 105 (281)
T d1c4xa_ 45 WRPIIPDLA----ENFFVVAPDLIGFGQSEYPETY----PGH----IMSWVGMRV-EQILGLMNHFG----IE--KSHIV 105 (281)
T ss_dssp HGGGHHHHH----TTSEEEEECCTTSTTSCCCSSC----CSS----HHHHHHHHH-HHHHHHHHHHT----CS--SEEEE
T ss_pred HHHHHHHHh----CCCEEEEEeCCCCccccccccc----ccc----chhhHHHhh-hhccccccccc----cc--cceec
Confidence 355566665 6999999999999763111000 000 011233343 56666555553 22 89999
Q ss_pred EEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCc-hhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCch
Q 012210 250 GHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSS-KSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPP 328 (468)
Q Consensus 250 GhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (468)
||||||.+++.+|.++ |++|+++|++++....... ......+..... ..........+.
T Consensus 106 GhS~Gg~ia~~~a~~~-----p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~---------- 165 (281)
T d1c4xa_ 106 GNSMGGAVTLQLVVEA-----PERFDKVALMGSVGAPMNARPPELARLLAFYA-----DPRLTPYRELIH---------- 165 (281)
T ss_dssp EETHHHHHHHHHHHHC-----GGGEEEEEEESCCSSCCSSCCHHHHHHHTGGG-----SCCHHHHHHHHH----------
T ss_pred cccccccccccccccc-----cccccceEEeccccCccccchhHHHHHHHhhh-----hcccchhhhhhh----------
Confidence 9999999999999998 8999999999985443222 111111110000 000000011111
Q ss_pred hHHHHHHHhhhcccc-CC-HHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecCCCC
Q 012210 329 YVFSWLNNLISAEDM-MH-PELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDL 406 (468)
Q Consensus 329 ~~~~~l~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~D~ 406 (468)
.+...+.. .. ..........................+.. .+ .........+.+|++|+|+|+|++|.
T Consensus 166 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~l~~i~~P~lii~G~~D~ 234 (281)
T d1c4xa_ 166 -------SFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKA-GM---ESLVIPPATLGRLPHDVLVFHGRQDR 234 (281)
T ss_dssp -------TTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSS-CC---GGGCCCHHHHTTCCSCEEEEEETTCS
T ss_pred -------hhcccccccchhhhHHHHHhhhcccchhhhhhhhhhhHHhh-hh---hhhccchhhhhhhccceEEEEeCCCC
Confidence 11000000 00 01111110000000000011111111111 01 11122334678899999999999999
Q ss_pred cCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 407 ICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 407 ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
++|++.++.+.+.+|++ +++++ +++||+.|.| +|+++.+.|.+||+.
T Consensus 235 ~~~~~~~~~~~~~~~~~--~~~~i--~~~gH~~~~e------~p~~~~~~i~~Fl~s 281 (281)
T d1c4xa_ 235 IVPLDTSLYLTKHLKHA--ELVVL--DRCGHWAQLE------RWDAMGPMLMEHFRA 281 (281)
T ss_dssp SSCTHHHHHHHHHCSSE--EEEEE--SSCCSCHHHH------SHHHHHHHHHHHHHC
T ss_pred CcCHHHHHHHHHHCCCC--EEEEE--CCCCCchHHh------CHHHHHHHHHHHhCC
Confidence 99999999999999987 88888 8999999998 999999999999973
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.83 E-value=6.1e-20 Score=173.58 Aligned_cols=253 Identities=13% Similarity=0.159 Sum_probs=142.9
Q ss_pred ccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcC
Q 012210 161 RQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSK 240 (468)
Q Consensus 161 ~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~ 240 (468)
|++.+-...++.+++.|+ +||+|+++|++|++.... ...+++.++++ +|+.++++.+..
T Consensus 36 HG~~~~~~~~~~~~~~L~----~~~~vi~~d~~G~G~S~~-------------~~~~~~~~~~~-~~l~~~l~~l~~--- 94 (291)
T d1bn7a_ 36 HGNPTSSYLWRNIIPHVA----PSHRCIAPDLIGMGKSDK-------------PDLDYFFDDHV-RYLDAFIEALGL--- 94 (291)
T ss_dssp CCTTCCGGGGTTTHHHHT----TTSCEEEECCTTSTTSCC-------------CSCCCCHHHHH-HHHHHHHHHTTC---
T ss_pred CCCCCCHHHHHHHHHHHh----cCCEEEEEeCCCCccccc-------------cccccchhHHH-HHHhhhhhhhcc---
Confidence 333333444555666665 699999999999976311 11345677876 888888887643
Q ss_pred CCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHh
Q 012210 241 PKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAA 320 (468)
Q Consensus 241 ~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (468)
. +++++||||||.+++.+|.++ |+++++++++++................ ........ ......
T Consensus 95 -~--~~~lvGhS~Gg~ia~~~a~~~-----p~~~~~li~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-----~~~~~~ 158 (291)
T d1bn7a_ 95 -E--EVVLVIHDWGSALGFHWAKRN-----PERVKGIACMEFIRPIPTWDEWPEFARE---TFQAFRTA-----DVGREL 158 (291)
T ss_dssp -C--SEEEEEEHHHHHHHHHHHHHC-----GGGEEEEEEEEECCCBCSGGGSCHHHHH---HHHHHTST-----THHHHH
T ss_pred -c--cccccccccccchhHHHHHhC-----CcceeeeeeeccccCCccchhhhhhhhh---HHHHHhhh-----hhHHHh
Confidence 2 999999999999999999998 9999999999765543222110000000 00000000 000000
Q ss_pred cCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCc-ccccC-CccccccccCccCccEE
Q 012210 321 YPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGG-LRDRG-GKFFYKDHIHKCNIPIL 398 (468)
Q Consensus 321 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~l~~I~vPvL 398 (468)
.. ....+....+.... ...........+...............+...+.... ..... ....+...+.++++|+|
T Consensus 159 ~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l 234 (291)
T d1bn7a_ 159 II--DQNAFIEGVLPKCV--VRPLTEVEMDHYREPFLKPVDREPLWRFPNEIPIAGEPANIVALVEAYMNWLHQSPVPKL 234 (291)
T ss_dssp HT--TSCHHHHTHHHHTC--SSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEE
T ss_pred hh--hhhhhHHhhhhhhc--cccchHHHHHHHHHHhcchhhhHHHHHHHHHhhhhhhhchhhhhhhhhhhhhhcCCCCEE
Confidence 00 00000000000000 001122222222211111111111111111111000 00000 00011234678999999
Q ss_pred EEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 399 AIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 399 iI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
+|+|++|.++|++.++++.+.+|++ +++++ ++++|+.|.| .|++|.+.|.+||+..
T Consensus 235 ii~G~~D~~~~~~~~~~~~~~~~~~--~~~~i--~~~gH~~~~e------~p~~v~~~i~~fL~~l 290 (291)
T d1bn7a_ 235 LFWGTPGVLIPPAEAARLAESLPNC--KTVDI--GPGLHYLQED------NPDLIGSEIARWLPGL 290 (291)
T ss_dssp EEEEEECSSSCHHHHHHHHHHSTTE--EEEEE--EEESSCGGGT------CHHHHHHHHHHHSGGG
T ss_pred EEEeCCCCCcCHHHHHHHHHHCCCC--EEEEE--CCCCCchHHh------CHHHHHHHHHHHHHhh
Confidence 9999999999999999999999986 77777 8899999998 9999999999999864
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=99.82 E-value=1.2e-19 Score=170.07 Aligned_cols=245 Identities=18% Similarity=0.213 Sum_probs=140.7
Q ss_pred ccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcC
Q 012210 161 RQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSK 240 (468)
Q Consensus 161 ~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~ 240 (468)
|++.+-...++.+++.|+ .+||+|+++|++|++..-. ....++..+++ +|+.++++.+..
T Consensus 26 HG~~~~~~~~~~~~~~l~---~~g~~vi~~D~~G~G~S~~-------------~~~~~~~~~~~-~dl~~~l~~l~~--- 85 (274)
T d1a8qa_ 26 HGWPLNGDAWQDQLKAVV---DAGYRGIAHDRRGHGHSTP-------------VWDGYDFDTFA-DDLNDLLTDLDL--- 85 (274)
T ss_dssp CCTTCCGGGGHHHHHHHH---HTTCEEEEECCTTSTTSCC-------------CSSCCSHHHHH-HHHHHHHHHTTC---
T ss_pred CCCCCCHHHHHHHHHHHH---HCCCEEEEEeCCCCccccc-------------ccccccchhhH-HHHHHHHHHhhh---
Confidence 444343445566666676 8999999999999865211 01234667776 888888877643
Q ss_pred CCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHh
Q 012210 241 PKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAA 320 (468)
Q Consensus 241 ~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (468)
++++++||||||.+++.+++++. |++|++++++++............. .... .....+....
T Consensus 86 ---~~~~lvGhS~Gg~~~~~~~a~~~----p~~v~~~~~~~~~~~~~~~~~~~~~----~~~~-------~~~~~~~~~~ 147 (274)
T d1a8qa_ 86 ---RDVTLVAHSMGGGELARYVGRHG----TGRLRSAVLLSAIPPVMIKSDKNPD----GVPD-------EVFDALKNGV 147 (274)
T ss_dssp ---CSEEEEEETTHHHHHHHHHHHHC----STTEEEEEEESCCCSCCBCCSSCTT----SBCH-------HHHHHHHHHH
T ss_pred ---hhhcccccccccchHHHHHHHhh----hccceeEEEEeccCccchhhhhccc----hhhH-------HHHHHHHhhh
Confidence 28999999999999999877652 6789999999864433221100000 0000 0000000000
Q ss_pred cCCCCCchhHHHHHHHhhhccc---cCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccE
Q 012210 321 YPLSSSPPYVFSWLNNLISAED---MMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPI 397 (468)
Q Consensus 321 ~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPv 397 (468)
.. ....+.......++.... .........+......... .........+. ..++...+.+|++|+
T Consensus 148 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---------~~~~~~~l~~i~~Pv 215 (274)
T d1a8qa_ 148 LT--ERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTI-EGGVRCVDAFG---------YTDFTEDLKKFDIPT 215 (274)
T ss_dssp HH--HHHHHHHHHHHHHTTTTSTTCCCCHHHHHHHHHHHTTSCH-HHHHHHHHHHH---------HCCCHHHHTTCCSCE
T ss_pred hh--hhHHHhhhhhhhhhhccccchhhhhhHHHHHHHhhhccch-hhhhhHHHHhh---------ccchHHHHHhcccee
Confidence 00 000001111111111111 1112122222111112221 11222222221 112345688999999
Q ss_pred EEEecCCCCcCCHHH-HHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 398 LAIAGDQDLICPPEA-VEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 398 LiI~G~~D~ivp~~~-~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
|+|+|++|.++|++. .+.+.+.+|++ +++++ +++||+.|++. +.|++|.+.|.+||++
T Consensus 216 lii~G~~D~~~~~~~~~~~~~~~~~~~--~~~~i--~~~gH~~~~~~----~~p~~~~~~i~~FL~k 274 (274)
T d1a8qa_ 216 LVVHGDDDQVVPIDATGRKSAQIIPNA--ELKVY--EGSSHGIAMVP----GDKEKFNRDLLEFLNK 274 (274)
T ss_dssp EEEEETTCSSSCGGGTHHHHHHHSTTC--EEEEE--TTCCTTTTTST----THHHHHHHHHHHHHTC
T ss_pred eeeccCCCCCcCHHHHHHHHHHhCCCC--EEEEE--CCCCCcccccc----cCHHHHHHHHHHHHCc
Confidence 999999999999875 56788889987 88888 99999988741 2789999999999975
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Probab=99.82 E-value=5.3e-19 Score=166.99 Aligned_cols=258 Identities=13% Similarity=0.067 Sum_probs=142.8
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|++.+-...+..++..|+ +||+|+++|++|++........ ....+++++++ +|+.++++.+
T Consensus 31 vv~lHG~~~~~~~~~~~~~~l~----~~~~vi~~D~~G~G~s~~~~~~---------~~~~~~~~~~a-~~~~~~~~~l- 95 (293)
T d1ehya_ 31 LLLLHGWPGFWWEWSKVIGPLA----EHYDVIVPDLRGFGDSEKPDLN---------DLSKYSLDKAA-DDQAALLDAL- 95 (293)
T ss_dssp EEEECCSSCCGGGGHHHHHHHH----TTSEEEEECCTTSTTSCCCCTT---------CGGGGCHHHHH-HHHHHHHHHT-
T ss_pred EEEECCCCCCHHHHHHHHHHHh----cCCEEEEecCCcccCCcccccc---------ccccccchhhh-hHHHhhhhhc-
Confidence 3443555555555566666665 6999999999999753221110 01123556665 7777776655
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhH
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAL 316 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
+.. +++++||||||.+++.+|.+| |+++.++|++++............ ............. ...
T Consensus 96 ---~~~--~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----~~~- 159 (293)
T d1ehya_ 96 ---GIE--KAYVVGHDFAAIVLHKFIRKY-----SDRVIKAAIFDPIQPDFGPVYFGL-GHVHESWYSQFHQ----LDM- 159 (293)
T ss_dssp ---TCC--CEEEEEETHHHHHHHHHHHHT-----GGGEEEEEEECCSCTTC------------CCHHHHHTT----CHH-
T ss_pred ---Ccc--ccccccccccccchhcccccC-----ccccceeeeeeccCccccchhhhh-hhhhhhhhhhhhc----cch-
Confidence 333 999999999999999999998 999999999987654221110000 0000000000000 000
Q ss_pred HHHhcCCCCCchhHHHHHHHh----hhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCc
Q 012210 317 LTAAYPLSSSPPYVFSWLNNL----ISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHK 392 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 392 (468)
..... .........++..+ .........+.+..................+......... ..........
T Consensus 160 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 232 (293)
T d1ehya_ 160 AVEVV--GSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDA-----ALWTDLDHTM 232 (293)
T ss_dssp HHHHH--TSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSSSSC-----CCCCTGGGSC
T ss_pred hhhhh--ccchhHHHHHHHHhhhhcccccccccHHHHHhhhhccccchhhhhhhhhhhhccccch-----hhhhhhhhhc
Confidence 00000 00111111222111 1122223444444443333222222222222222111110 0001123456
Q ss_pred cCccEEEEecCCCCcCCHHHHH-HHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 012210 393 CNIPILAIAGDQDLICPPEAVE-ETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 462 (468)
Q Consensus 393 I~vPvLiI~G~~D~ivp~~~~~-~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~ 462 (468)
+++|+|+|+|++|.++|.+... .+.+.+++. +++++ +++||+.|.| +|+++.+.|.+||+
T Consensus 233 ~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~--~~~~i--~~~gH~~~~e------~Pe~~~~~I~~Ffr 293 (293)
T d1ehya_ 233 SDLPVTMIWGLGDTCVPYAPLIEFVPKYYSNY--TMETI--EDCGHFLMVE------KPEIAIDRIKTAFR 293 (293)
T ss_dssp BCSCEEEEEECCSSCCTTHHHHHHHHHHBSSE--EEEEE--TTCCSCHHHH------CHHHHHHHHHHHCC
T ss_pred cCCceEEEEeCCCCCcCHHHHHHHHHHhCCCC--EEEEE--CCCCCchHHH------CHHHHHHHHHHhhC
Confidence 8999999999999999987655 456677765 88888 9999999998 99999999999985
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=99.81 E-value=6.4e-20 Score=171.92 Aligned_cols=242 Identities=16% Similarity=0.188 Sum_probs=140.3
Q ss_pred cccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHh
Q 012210 158 LERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRA 237 (468)
Q Consensus 158 l~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~ 237 (468)
+-.|.+.+-...++.++..|+ .+||+|+++|++|++.... ...++++++++ +|+.++++.+..
T Consensus 27 vllHG~~~~~~~~~~~~~~l~---~~g~~vi~~D~~G~G~S~~-------------~~~~~~~~~~~-~dl~~~l~~l~~ 89 (277)
T d1brta_ 27 VLIHGFPLSGHSWERQSAALL---DAGYRVITYDRRGFGQSSQ-------------PTTGYDYDTFA-ADLNTVLETLDL 89 (277)
T ss_dssp EEECCTTCCGGGGHHHHHHHH---HTTCEEEEECCTTSTTSCC-------------CSSCCSHHHHH-HHHHHHHHHHTC
T ss_pred EEECCCCCCHHHHHHHHHHHH---hCCCEEEEEeCCCCCcccc-------------cccccchhhhh-hhhhhhhhccCc
Confidence 333544444555566677776 8999999999999866311 11245788886 899998888744
Q ss_pred hcCCCCCcEEEEEEehhHH-HHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhH
Q 012210 238 QSKPKDGKLLAIGHSMGGI-LLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAL 316 (468)
Q Consensus 238 ~~~~~~~~v~lvGhS~GG~-ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
. +++++||||||. ++..++.++ |++|+++|++++..+......... ....+ ...
T Consensus 90 ~------~~~lvGhS~G~~~~~~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~-------------~~~~~-~~~ 144 (277)
T d1brta_ 90 Q------DAVLVGFSTGTGEVARYVSSYG-----TARIAKVAFLASLEPFLLKTDDNP-------------DGAAP-QEF 144 (277)
T ss_dssp C------SEEEEEEGGGHHHHHHHHHHHC-----STTEEEEEEESCCCSCCBCBTTBT-------------TCSBC-HHH
T ss_pred c------cccccccccchhhhhHHHHHhh-----hcccceEEEecCCCcccccchhhh-------------hhhhh-hhH
Confidence 3 899999999975 555566665 889999999987544322110000 00000 000
Q ss_pred HHHhcCCC--CCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHH-hcCcc----cccCCccccccc
Q 012210 317 LTAAYPLS--SSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAF-REGGL----RDRGGKFFYKDH 389 (468)
Q Consensus 317 ~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~ 389 (468)
...+.... ....+...+........ ................... ....+ .......++...
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (277)
T d1brta_ 145 FDGIVAAVKADRYAFYTGFFNDFYNLD------------ENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRAD 212 (277)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHTTHH------------HHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGGGTTCCCTTT
T ss_pred HHHHHHhhhccchhhhhhccccccccc------------hhhhhhhhHHHhhhhhcccchhhhhhhhhhhhhhhhhHHHH
Confidence 00000000 00000001111110000 0000011111111111100 00000 000012234567
Q ss_pred cCccCccEEEEecCCCCcCCHHH-HHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 390 IHKCNIPILAIAGDQDLICPPEA-VEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 390 l~~I~vPvLiI~G~~D~ivp~~~-~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
+.+|++|+++|+|++|.+++++. .+.+.+.+|+. +++++ +++||+.+.+ +|++|.+.|.+||++
T Consensus 213 l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~--~~~~i--~~~gH~~~~e------~p~~~~~~i~~fL~k 277 (277)
T d1brta_ 213 IPRIDVPALILHGTGDRTLPIENTARVFHKALPSA--EYVEV--EGAPHGLLWT------HAEEVNTALLAFLAK 277 (277)
T ss_dssp GGGCCSCEEEEEETTCSSSCGGGTHHHHHHHCTTS--EEEEE--TTCCTTHHHH------THHHHHHHHHHHHHC
T ss_pred HHhcCccceeEeecCCCCcCHHHHHHHHHHhCCCC--EEEEE--CCCCCchHHh------CHHHHHHHHHHHHCc
Confidence 88999999999999999999875 56677889987 88888 9999999998 999999999999975
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=99.81 E-value=8.4e-20 Score=167.43 Aligned_cols=247 Identities=14% Similarity=0.093 Sum_probs=142.2
Q ss_pred ccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcC
Q 012210 161 RQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSK 240 (468)
Q Consensus 161 ~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~ 240 (468)
|++.|-...++.++..|+ .+||+|+++|++|++...... ...+++.++. .|+...++... .
T Consensus 9 HG~~~~~~~w~~~~~~L~---~~g~~vi~~Dl~G~G~S~~~~------------~~~~~~~~~~-~~~~~~~~~~~---~ 69 (258)
T d1xkla_ 9 HGACHGGWSWYKLKPLLE---AAGHKVTALDLAASGTDLRKI------------EELRTLYDYT-LPLMELMESLS---A 69 (258)
T ss_dssp CCTTCCGGGGTTHHHHHH---HTTCEEEECCCTTSTTCCCCG------------GGCCSHHHHH-HHHHHHHHTSC---S
T ss_pred CCCCCCHHHHHHHHHHHH---hCCCEEEEecCCCCCCCCCCC------------CCCcchHHHH-HHHhhhhhccc---c
Confidence 455454556788899998 899999999999997631110 1123455554 55554444332 2
Q ss_pred CCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchh--hHHhhcccCchhhhcCCCCcchHhHHH
Q 012210 241 PKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKS--TLKLLLPLADPAQALNVPVVPLGALLT 318 (468)
Q Consensus 241 ~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (468)
. .+++++||||||.+++.++.++ |.++.++|++++......... ...................
T Consensus 70 ~--~~~~lvghS~Gg~va~~~a~~~-----p~~~~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 134 (258)
T d1xkla_ 70 D--EKVILVGHSLGGMNLGLAMEKY-----PQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQF-------- 134 (258)
T ss_dssp S--SCEEEEEETTHHHHHHHHHHHC-----GGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEE--------
T ss_pred c--ccccccccchhHHHHHHHhhhh-----ccccceEEEecccCCCcccchHHHHHHHhhhhhhhhhhhhhh--------
Confidence 2 3899999999999999999998 999999999987654332211 1111000000000000000
Q ss_pred HhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhc-CcccccCCccccccccCccCccE
Q 012210 319 AAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFRE-GGLRDRGGKFFYKDHIHKCNIPI 397 (468)
Q Consensus 319 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~I~vPv 397 (468)
....... .........++........ ................ ..+.......+....+..+++|+
T Consensus 135 -~~~~~~~----------~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 200 (258)
T d1xkla_ 135 -LPYGSPE----------EPLTSMFFGPKFLAHKLYQ---LCSPEDLALASSLVRPSSLFMEDLSKAKYFTDERFGSVKR 200 (258)
T ss_dssp -EECSCTT----------SCCEEEECCHHHHHHHTST---TSCHHHHHHHHHHCCCBCCCHHHHHHCCCCCTTTGGGSCE
T ss_pred -hhhhhhh----------hhcccccccHHHHHHHhhh---cccHHHHHHhhhhhhhhhhhhhhhhhhhhcccccccccce
Confidence 0000000 0000000111111111100 0011111111100000 00000000112334677889999
Q ss_pred EEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 398 LAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 398 LiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
++|+|++|.++|++..+.+.+.+|+. +++++ +++||+.|++ +|+++.+.|.+|++++.
T Consensus 201 l~i~g~~D~~~~~~~~~~~~~~~~~~--~~~~i--~~~gH~~~~e------~P~~~~~~l~e~~~k~~ 258 (258)
T d1xkla_ 201 VYIVCTEDKGIPEEFQRWQIDNIGVT--EAIEI--KGADHMAMLC------EPQKLCASLLEIAHKYN 258 (258)
T ss_dssp EEEEETTCTTTTHHHHHHHHHHHCCS--EEEEE--TTCCSCHHHH------SHHHHHHHHHHHHHHCC
T ss_pred eEeeecCCCCCCHHHHHHHHHHCCCC--EEEEE--CCCCCchHHh------CHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999987 78888 9999999998 99999999999999873
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Probab=99.81 E-value=1.1e-19 Score=170.67 Aligned_cols=247 Identities=15% Similarity=0.178 Sum_probs=138.9
Q ss_pred cccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHh
Q 012210 158 LERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRA 237 (468)
Q Consensus 158 l~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~ 237 (468)
+-.|++.+-...++.++..|. .+||+|+++|++|++..-. ...++++++++ +|+.++++.+..
T Consensus 27 lllHG~~~~~~~~~~~~~~l~---~~~~~vi~~D~~G~G~S~~-------------~~~~~~~~~~~-~di~~~i~~l~~ 89 (279)
T d1hkha_ 27 VLIHGYPLDGHSWERQTRELL---AQGYRVITYDRRGFGGSSK-------------VNTGYDYDTFA-ADLHTVLETLDL 89 (279)
T ss_dssp EEECCTTCCGGGGHHHHHHHH---HTTEEEEEECCTTSTTSCC-------------CSSCCSHHHHH-HHHHHHHHHHTC
T ss_pred EEECCCCCCHHHHHHHHHHHH---HCCCEEEEEechhhCCccc-------------cccccchhhhh-hhhhhhhhhcCc
Confidence 333444444444556666665 8999999999999976311 01245788886 999999988743
Q ss_pred hcCCCCCcEEEEEEehhHH-HHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhH
Q 012210 238 QSKPKDGKLLAIGHSMGGI-LLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAL 316 (468)
Q Consensus 238 ~~~~~~~~v~lvGhS~GG~-ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
++++++||||||. ++..+|..+ |++|.++|+++++.+........... ........+
T Consensus 90 ------~~~~lvGhS~Gg~~~a~~~a~~~-----p~~v~~lvli~~~~~~~~~~~~~~~~-----------~~~~~~~~~ 147 (279)
T d1hkha_ 90 ------RDVVLVGFSMGTGELARYVARYG-----HERVAKLAFLASLEPFLVQRDDNPEG-----------VPQEVFDGI 147 (279)
T ss_dssp ------CSEEEEEETHHHHHHHHHHHHHC-----STTEEEEEEESCCCSBCBCBTTBTTS-----------BCHHHHHHH
T ss_pred ------Cccccccccccccchhhhhcccc-----ccccceeEEeeccCCccccchhhhhh-----------hhHHHHHHH
Confidence 2899999999975 555556555 88999999998765443221100000 000000000
Q ss_pred HHHhcCCCCCchhHHHHHHHhh----hccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCc
Q 012210 317 LTAAYPLSSSPPYVFSWLNNLI----SAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHK 392 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 392 (468)
...... .............. ......................+...+........ ........+.+
T Consensus 148 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 217 (279)
T d1hkha_ 148 EAAAKG--DRFAWFTDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWIE--------DFRSDVEAVRA 217 (279)
T ss_dssp HHHHHH--CHHHHHHHHHHHHHTHHHHBTTTBCHHHHHHHHHHHHTSCTTHHHHTHHHHTC--------BCHHHHHHHHH
T ss_pred HHhhhh--hhhhhhhhhhhhhcccchhhhhhhhhhhhhhhhhhhcccchhhhhhhhhhhhc--------ccccchhhhcc
Confidence 000000 00000000000000 00011112222111111111111111111111100 00011234567
Q ss_pred cCccEEEEecCCCCcCCHH-HHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 393 CNIPILAIAGDQDLICPPE-AVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 393 I~vPvLiI~G~~D~ivp~~-~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
+++|+|+|+|++|.++|.+ ..+.+.+.+|+. +++++ +++||+.|.+ +|+++.+.|.+||++
T Consensus 218 ~~~P~l~i~G~~D~~~~~~~~~~~~~~~~p~~--~~~~i--~~~gH~~~~e------~p~~v~~~i~~fl~k 279 (279)
T d1hkha_ 218 AGKPTLILHGTKDNILPIDATARRFHQAVPEA--DYVEV--EGAPHGLLWT------HADEVNAALKTFLAK 279 (279)
T ss_dssp HCCCEEEEEETTCSSSCTTTTHHHHHHHCTTS--EEEEE--TTCCTTHHHH------THHHHHHHHHHHHHC
T ss_pred cCCceEEEEcCCCCccCHHHHHHHHHHhCCCC--EEEEE--CCCCCchHHh------CHHHHHHHHHHHHCc
Confidence 8999999999999999876 568888999987 78888 9999999998 999999999999975
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.80 E-value=5e-19 Score=170.00 Aligned_cols=257 Identities=10% Similarity=0.066 Sum_probs=145.9
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|++.+-......+...|+ .+||+|+++|+.|++..... .....|+++.++ +|+.++++.+.
T Consensus 50 llllHG~~~~~~~~~~~~~~l~---~~~~~vi~~Dl~G~G~S~~~-----------~~~~~~~~~~~~-~~l~~~l~~l~ 114 (310)
T d1b6ga_ 50 FLCLHGEPTWSYLYRKMIPVFA---ESGARVIAPDFFGFGKSDKP-----------VDEEDYTFEFHR-NFLLALIERLD 114 (310)
T ss_dssp EEECCCTTCCGGGGTTTHHHHH---HTTCEEEEECCTTSTTSCEE-----------SCGGGCCHHHHH-HHHHHHHHHHT
T ss_pred EEEECCCCCchHHHHHHHHHhh---ccCceEEEeeecCccccccc-----------cccccccccccc-cchhhhhhhcc
Confidence 4444555555556667777777 89999999999999763211 112345677776 88888888765
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchh-hHHhhcccCchhhhcCCCCcchHh
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKS-TLKLLLPLADPAQALNVPVVPLGA 315 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 315 (468)
.. +++++||||||.+++.+|.++ |++|+++|+++++........ ......... ......
T Consensus 115 ~~------~~~lvGhS~Gg~ia~~~A~~~-----P~~V~~lvl~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~ 174 (310)
T d1b6ga_ 115 LR------NITLVVQDWGGFLGLTLPMAD-----PSRFKRLIIMNACLMTDPVTQPAFSAFVTQP---------ADGFTA 174 (310)
T ss_dssp CC------SEEEEECTHHHHHHTTSGGGS-----GGGEEEEEEESCCCCCCTTTCTHHHHTTTSS---------TTTHHH
T ss_pred cc------ccccccceecccccccchhhh-----ccccceEEEEcCccCCCcccchhHHHHhhcc---------hhhhhh
Confidence 43 999999999999999999998 999999999987654332111 111110000 000000
Q ss_pred H-HHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCc-ccccCCccccccccCcc
Q 012210 316 L-LTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGG-LRDRGGKFFYKDHIHKC 393 (468)
Q Consensus 316 ~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~I 393 (468)
. .....+.... ...+..... ..........+...............+........ ...............++
T Consensus 175 ~~~~~~~~~~~~---~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (310)
T d1b6ga_ 175 WKYDLVTPSDLR---LDQFMKRWA---PTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQACIDISTEAISFWQNDW 248 (310)
T ss_dssp HHHHHHSCSSCC---HHHHHHHHS---TTCCHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTC
T ss_pred hhhhhccchhhh---hhhhhhccC---ccccHHHHHHHHhhcchhhhhhcchhhhhhhhhhhhhhhhhhhhhhHHhhccc
Confidence 0 0000000000 001111100 00111211111111110000111111111110000 00000000011134578
Q ss_pred CccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 394 NIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 394 ~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
++|+|+++|++|.+++++..+.+.+.+++. ++++++ +++||+.|.+ .|+.+.+.|.+||+.
T Consensus 249 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~-~~~~~i--~~~GH~~~~e------~pe~v~~~i~~Fl~~ 309 (310)
T d1b6ga_ 249 NGQTFMAIGMKDKLLGPDVMYPMKALINGC-PEPLEI--ADAGHFVQEF------GEQVAREALKHFAET 309 (310)
T ss_dssp CSEEEEEEETTCSSSSHHHHHHHHHHSTTC-CCCEEE--TTCCSCGGGG------HHHHHHHHHHHHHHT
T ss_pred CCCeEEEEeCCCCCCCHHHHHHHHHhcCCC-ccEEEE--CCCcCchhhh------CHHHHHHHHHHHHhC
Confidence 999999999999999999999999999874 356666 8999999987 899999999999985
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Probab=99.80 E-value=2.2e-19 Score=167.26 Aligned_cols=235 Identities=17% Similarity=0.127 Sum_probs=136.6
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|.+.+-...++.++..|+ +||+|+++|++|++..-. . +...+ .|+.+.+.
T Consensus 14 lvllHG~~~~~~~~~~~~~~L~----~~~~vi~~D~~G~G~S~~----------~-------~~~~~--~d~~~~~~--- 67 (256)
T d1m33a_ 14 LVLLHGWGLNAEVWRCIDEELS----SHFTLHLVDLPGFGRSRG----------F-------GALSL--ADMAEAVL--- 67 (256)
T ss_dssp EEEECCTTCCGGGGGGTHHHHH----TTSEEEEECCTTSTTCCS----------C-------CCCCH--HHHHHHHH---
T ss_pred EEEECCCCCCHHHHHHHHHHHh----CCCEEEEEeCCCCCCccc----------c-------ccccc--cccccccc---
Confidence 3344555444455566776665 689999999999975210 0 11111 33333322
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhH
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAL 316 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
.. . .++++++||||||.+++.+|.++ |+.+++++++++...+....... . ........+
T Consensus 68 ~~-~--~~~~~l~GhS~Gg~ia~~~a~~~-----p~~~~~l~~~~~~~~~~~~~~~~-~------------~~~~~~~~~ 126 (256)
T d1m33a_ 68 QQ-A--PDKAIWLGWSLGGLVASQIALTH-----PERVRALVTVASSPCFSARDEWP-G------------IKPDVLAGF 126 (256)
T ss_dssp TT-S--CSSEEEEEETHHHHHHHHHHHHC-----GGGEEEEEEESCCSCCBCBTTBC-S------------BCHHHHHHH
T ss_pred cc-c--ccceeeeecccchHHHHHHHHhC-----Ccccceeeeeecccccccchhhh-h------------hHHHHHHHH
Confidence 22 1 24899999999999999999998 89999999987654332211000 0 000000000
Q ss_pred HHHhcCCCCCchhHHHHHHHhhhccc--cCC-HH---HHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCcccccccc
Q 012210 317 LTAAYPLSSSPPYVFSWLNNLISAED--MMH-PE---LLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHI 390 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 390 (468)
...+. ......+..+..... ... .. .+...... ........+......+.. .++...+
T Consensus 127 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---------~~~~~~l 190 (256)
T d1m33a_ 127 QQQLS------DDQQRTVERFLALQTMGTETARQDARALKKTVLA-LPMPEVDVLNGGLEILKT---------VDLRQPL 190 (256)
T ss_dssp HHHHH------HHHHHHHHHHHHTTSTTSTTHHHHHHHHHHHHHT-SCCCCHHHHHHHHHHHHH---------CCCTTGG
T ss_pred Hhhhh------hhhHHHHHHHhhhhhccccchhhHHHHHHHhhhh-cchhhHHHHHhhhhhhcc---------cchHHHH
Confidence 00000 000011111111100 001 11 11111111 122223333333333221 2345678
Q ss_pred CccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 391 HKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 391 ~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
++|++|+|+|+|++|.++|++.++.+.+.+|++ +++++ +++||+.+.| +|++|.+.|.+||++.
T Consensus 191 ~~i~~P~lii~G~~D~~~p~~~~~~l~~~~~~~--~~~~i--~~~gH~~~~e------~p~~~~~~l~~fl~~i 254 (256)
T d1m33a_ 191 QNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHS--ESYIF--AKAAHAPFIS------HPAEFCHLLVALKQRV 254 (256)
T ss_dssp GGCCSCEEEEEETTCSSSCGGGCC-CTTTCTTC--EEEEE--TTCCSCHHHH------SHHHHHHHHHHHHTTS
T ss_pred HhccCCccccccccCCCCCHHHHHHHHHHCCCC--EEEEE--CCCCCchHHH------CHHHHHHHHHHHHHHc
Confidence 899999999999999999999999999999987 88888 9999999998 9999999999999874
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.79 E-value=3.7e-18 Score=154.66 Aligned_cols=227 Identities=17% Similarity=0.223 Sum_probs=140.9
Q ss_pred cccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHH
Q 012210 156 SLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYI 235 (468)
Q Consensus 156 ~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l 235 (468)
.++-.|++.|-...++.+++.|+ .+||.|+++|+.|++.. ..... .....+.. .+...++..+
T Consensus 13 ~vvliHG~~~~~~~~~~l~~~L~---~~G~~v~~~D~~G~G~s----~~~~~---------~~~~~~~~-~~~~~~~~~~ 75 (242)
T d1tqha_ 13 AVLLLHGFTGNSADVRMLGRFLE---SKGYTCHAPIYKGHGVP----PEELV---------HTGPDDWW-QDVMNGYEFL 75 (242)
T ss_dssp EEEEECCTTCCTHHHHHHHHHHH---HTTCEEEECCCTTSSSC----HHHHT---------TCCHHHHH-HHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHHHH---HCCCEEEEEeCCCCccc----ccccc---------ccchhHHH-HHHHHHHhhh
Confidence 34445777776777888999998 89999999999999752 11110 11223333 5556666655
Q ss_pred HhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHh
Q 012210 236 RAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGA 315 (468)
Q Consensus 236 ~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (468)
... +. .+++++||||||.+++.++.++ + ...+++++++..............
T Consensus 76 ~~~-~~--~~~~l~G~S~Gg~~~~~~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~~~~------------------ 127 (242)
T d1tqha_ 76 KNK-GY--EKIAVAGLSLGGVFSLKLGYTV-----P--IEGIVTMCAPMYIKSEETMYEGVL------------------ 127 (242)
T ss_dssp HHH-TC--CCEEEEEETHHHHHHHHHHTTS-----C--CSCEEEESCCSSCCCHHHHHHHHH------------------
T ss_pred hhc-cc--CceEEEEcchHHHHhhhhcccC-----c--ccccccccccccccchhHHHHHHH------------------
Confidence 544 23 3899999999999999999875 3 345667766554433221111100
Q ss_pred HHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCC-Cc-HHHHHHHHHHHhcCcccccCCccccccccCcc
Q 012210 316 LLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCT-IP-AKLILQLTTAFREGGLRDRGGKFFYKDHIHKC 393 (468)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I 393 (468)
.+......... ................ .. ......... .....+..+
T Consensus 128 ----------------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~ 176 (242)
T d1tqha_ 128 ----------------EYAREYKKREG-KSEEQIEQEMEKFKQTPMKTLKALQELIA--------------DVRDHLDLI 176 (242)
T ss_dssp ----------------HHHHHHHHHHT-CCHHHHHHHHHHHTTSCCTTHHHHHHHHH--------------HHHHTGGGC
T ss_pred ----------------HHHHHHhhhcc-chhhhHHHHHhhhhhhccchhhccccccc--------------cccccccee
Confidence 00000000000 0111111111111111 11 111111111 113467889
Q ss_pred CccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 394 NIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 394 ~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
++|+|+++|++|.++|++.++.+++.+++..++++++ +++||+.|.+ +.++++.+.|.+||++.+
T Consensus 177 ~~p~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~--~~~gH~~~~~-----~~~~~~~~~i~~Fl~~l~ 241 (242)
T d1tqha_ 177 YAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWY--EQSGHVITLD-----QEKDQLHEDIYAFLESLD 241 (242)
T ss_dssp CSCEEEEEETTCSSSCTTHHHHHHHHCCCSSEEEEEE--TTCCSSGGGS-----TTHHHHHHHHHHHHHHSC
T ss_pred ccccceeecccCCccCHHHHHHHHHHcCCCCcEEEEE--CCCCCcCccc-----cCHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999998777788988 9999999987 368999999999998753
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Probab=99.77 E-value=1e-18 Score=163.35 Aligned_cols=242 Identities=17% Similarity=0.198 Sum_probs=139.3
Q ss_pred ccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcC
Q 012210 161 RQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSK 240 (468)
Q Consensus 161 ~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~ 240 (468)
|...+-...++.++..|+ .+||+|+++|++|++..-. ....+++++++ +|+.++++++...
T Consensus 28 HG~~~~~~~~~~~~~~l~---~~g~~vi~~D~~G~G~s~~-------------~~~~~~~~~~~-~~~~~~l~~l~~~-- 88 (275)
T d1a88a_ 28 HGWPLSADDWDNQMLFFL---SHGYRVIAHDRRGHGRSDQ-------------PSTGHDMDTYA-ADVAALTEALDLR-- 88 (275)
T ss_dssp CCTTCCGGGGHHHHHHHH---HTTCEEEEECCTTSTTSCC-------------CSSCCSHHHHH-HHHHHHHHHHTCC--
T ss_pred CCCCCCHHHHHHHHHHHH---hCCCEEEEEeccccccccc-------------ccccccccccc-ccccccccccccc--
Confidence 444444445566677776 8999999999999865211 01245778886 9999999887432
Q ss_pred CCCCcEEEEEEeh-hHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHH
Q 012210 241 PKDGKLLAIGHSM-GGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTA 319 (468)
Q Consensus 241 ~~~~~v~lvGhS~-GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (468)
+++++|||+ ||.+++.+|.++ |++|.++|++++............. .........+...
T Consensus 89 ----~~~~vg~s~~G~~~~~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~ 148 (275)
T d1a88a_ 89 ----GAVHIGHSTGGGEVARYVARAE-----PGRVAKAVLVSAVPPVMVKSDTNPD-----------GLPLEVFDEFRAA 148 (275)
T ss_dssp ----SEEEEEETHHHHHHHHHHHHSC-----TTSEEEEEEESCCCSCCBCBTTBTT-----------SBCHHHHHHHHHH
T ss_pred ----ccccccccccccchhhcccccC-----cchhhhhhhhcccccccccchhhhh-----------hhhhhhhhhhhhh
Confidence 889999997 555666677776 8999999999865432211100000 0000000000000
Q ss_pred hcCCCCCchhHHHHHHH-hhhc---cccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCc
Q 012210 320 AYPLSSSPPYVFSWLNN-LISA---EDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNI 395 (468)
Q Consensus 320 ~~~~~~~~~~~~~~l~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~v 395 (468)
.... ...+....... .... .................... ......+...+.. .++...+.+|++
T Consensus 149 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---------~~~~~~l~~i~~ 216 (275)
T d1a88a_ 149 LAAN--RAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGA-ANAHYECIAAFSE---------TDFTDDLKRIDV 216 (275)
T ss_dssp HHHC--HHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSC-HHHHHHHHHHHHH---------CCCHHHHHHCCS
T ss_pred hhhh--hHHHHHhhhhhhhhhcccchhhHHHHHHHHHHHhhcccc-hHHHHHHHHHhhh---------hhhhHHHHhhcc
Confidence 0000 00000000000 0000 00112222222211111111 1122222222211 123456788999
Q ss_pred cEEEEecCCCCcCCHHH-HHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 396 PILAIAGDQDLICPPEA-VEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 396 PvLiI~G~~D~ivp~~~-~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
|+|+|+|++|.++|.+. .+.+.+.+|+. +++++ +++||+.|.| +|+++.+.|.+||+.
T Consensus 217 P~l~i~G~~D~~~~~~~~~~~~~~~~~~~--~~~~i--~~~gH~~~~e------~p~~~~~~i~~Fl~s 275 (275)
T d1a88a_ 217 PVLVAHGTDDQVVPYADAAPKSAELLANA--TLKSY--EGLPHGMLST------HPEVLNPDLLAFVKS 275 (275)
T ss_dssp CEEEEEETTCSSSCSTTTHHHHHHHSTTE--EEEEE--TTCCTTHHHH------CHHHHHHHHHHHHHC
T ss_pred ccceeecCCCCCcCHHHHHHHHHHhCCCC--EEEEE--CCCCCchHHh------CHHHHHHHHHHHHcC
Confidence 99999999999998764 56777888876 88888 9999999998 999999999999973
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.77 E-value=3.4e-19 Score=163.25 Aligned_cols=168 Identities=18% Similarity=0.162 Sum_probs=118.8
Q ss_pred ccccccccchhh--HHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhh
Q 012210 161 RQSSAIAIQIRD--LSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQ 238 (468)
Q Consensus 161 ~~~~G~~~~i~~--~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~ 238 (468)
|++.+-...++. ..++|+ .+||+|+++|+.|++..-.. .....+....+. +++.++++.+..
T Consensus 38 HG~~~~~~~w~~~~~~~~la---~~gy~via~D~~G~G~S~~~-----------~~~~~~~~~~~~-~~l~~~~~~l~~- 101 (208)
T d1imja_ 38 HGIRFSSETWQNLGTLHRLA---QAGYRAVAIDLPGLGHSKEA-----------AAPAPIGELAPG-SFLAAVVDALEL- 101 (208)
T ss_dssp CCTTCCHHHHHHHTHHHHHH---HTTCEEEEECCTTSGGGTTS-----------CCSSCTTSCCCT-HHHHHHHHHHTC-
T ss_pred CCCCCChhHHhhhHHHHHHH---HcCCeEEEeecccccCCCCC-----------Ccccccchhhhh-hhhhhccccccc-
Confidence 333333333444 346777 99999999999998653110 001112222332 555666665533
Q ss_pred cCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHH
Q 012210 239 SKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLT 318 (468)
Q Consensus 239 ~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (468)
++++++||||||.+++.+|.++ |++++++|+++|......
T Consensus 102 -----~~~~lvG~S~Gg~~a~~~a~~~-----p~~v~~lV~~~p~~~~~~------------------------------ 141 (208)
T d1imja_ 102 -----GPPVVISPSLSGMYSLPFLTAP-----GSQLPGFVPVAPICTDKI------------------------------ 141 (208)
T ss_dssp -----CSCEEEEEGGGHHHHHHHHTST-----TCCCSEEEEESCSCGGGS------------------------------
T ss_pred -----ccccccccCcHHHHHHHHHHHh-----hhhcceeeecCccccccc------------------------------
Confidence 2899999999999999999987 899999999876321000
Q ss_pred HhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEE
Q 012210 319 AAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPIL 398 (468)
Q Consensus 319 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvL 398 (468)
. ...+.++++|+|
T Consensus 142 --------------------------~-----------------------------------------~~~~~~i~~P~L 154 (208)
T d1imja_ 142 --------------------------N-----------------------------------------AANYASVKTPAL 154 (208)
T ss_dssp --------------------------C-----------------------------------------HHHHHTCCSCEE
T ss_pred --------------------------c-----------------------------------------cccccccccccc
Confidence 0 012356889999
Q ss_pred EEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 399 AIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 399 iI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
+|+|++|.++|.. .+..+.+++. ++.++ ++++|..|.+ .|+++.+.|.+||++
T Consensus 155 ii~G~~D~~~~~~--~~~~~~~~~~--~~~~i--~~~gH~~~~~------~p~~~~~~l~~Fl~~ 207 (208)
T d1imja_ 155 IVYGDQDPMGQTS--FEHLKQLPNH--RVLIM--KGAGHPCYLD------KPEEWHTGLLDFLQG 207 (208)
T ss_dssp EEEETTCHHHHHH--HHHHTTSSSE--EEEEE--TTCCTTHHHH------CHHHHHHHHHHHHHT
T ss_pred cccCCcCcCCcHH--HHHHHhCCCC--eEEEE--CCCCCchhhh------CHHHHHHHHHHHHhc
Confidence 9999999998755 3556778876 77777 9999999987 999999999999985
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.77 E-value=2.6e-18 Score=159.79 Aligned_cols=244 Identities=18% Similarity=0.216 Sum_probs=140.8
Q ss_pred ccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhh
Q 012210 159 ERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQ 238 (468)
Q Consensus 159 ~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~ 238 (468)
-.|++.+-...++.+++.|+ .+||+|+++|++|++..-. ...++++++++ +|+.++++.+..
T Consensus 24 ~lHG~~~~~~~~~~~~~~l~---~~g~~vi~~D~~G~G~S~~-------------~~~~~~~~~~~-~~~~~~~~~~~~- 85 (271)
T d1va4a_ 24 FSHGWLLDADMWEYQMEYLS---SRGYRTIAFDRRGFGRSDQ-------------PWTGNDYDTFA-DDIAQLIEHLDL- 85 (271)
T ss_dssp EECCTTCCGGGGHHHHHHHH---TTTCEEEEECCTTSTTSCC-------------CSSCCSHHHHH-HHHHHHHHHHTC-
T ss_pred EECCCCCCHHHHHHHHHHHH---hCCCEEEEEeccccccccc-------------ccccccccccc-ccceeeeeecCC-
Confidence 34555555556677778887 8999999999999865210 11234677776 888887777643
Q ss_pred cCCCCCcEEEEEEehhHHHHHHHHH-hcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHH
Q 012210 239 SKPKDGKLLAIGHSMGGILLYAMLS-RCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALL 317 (468)
Q Consensus 239 ~~~~~~~v~lvGhS~GG~ia~~~a~-~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (468)
+ +++++|||+||.++..+++ ++ |+++.+++++++.............. ........+.
T Consensus 86 ---~--~~~~vg~s~gG~~~~~~~a~~~-----p~~v~~~v~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~ 144 (271)
T d1va4a_ 86 ---K--EVTLVGFSMGGGDVARYIARHG-----SARVAGLVLLGAVTPLFGQKPDYPQG-----------VPLDVFARFK 144 (271)
T ss_dssp ---C--SEEEEEETTHHHHHHHHHHHHC-----STTEEEEEEESCCCSCCBCBTTBTTS-----------BCHHHHHHHH
T ss_pred ---C--cceeeccccccccccccccccc-----cceeeEEEeecccccccccchhhhhh-----------hhhhHHHHHH
Confidence 2 8999999999987766544 44 78899999998765433221100000 0000000000
Q ss_pred HHhcCCCCCchhHHHHHHHhhhcc--ccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCc
Q 012210 318 TAAYPLSSSPPYVFSWLNNLISAE--DMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNI 395 (468)
Q Consensus 318 ~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~v 395 (468)
...... .......+........ ................... ..........+. ..++...+.+|++
T Consensus 145 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---------~~~~~~~l~~i~~ 212 (271)
T d1va4a_ 145 TELLKD--RAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLAS-LKATVDCVTAFA---------ETDFRPDMAKIDV 212 (271)
T ss_dssp HHHHHH--HHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSC-HHHHHHHHHHHH---------HCCCHHHHHHCCS
T ss_pred HHhhhh--hhhhhhhhcchhhcccchhhhhhhHHHHHHhhhhhhh-hhhhhhcccccc---------hhhhhhhhhhccc
Confidence 000000 0000111111111111 1111111111111111111 111222222211 1123456788999
Q ss_pred cEEEEecCCCCcCCHHHHHHHH-HhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 396 PILAIAGDQDLICPPEAVEETV-KLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 396 PvLiI~G~~D~ivp~~~~~~l~-~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
|+|+|+|++|.++|++...++. +.++++ +++++ |++||+.|.+ +|+++.+.|.+||++
T Consensus 213 Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~--~~~~~--~~~gH~~~~e------~p~~~~~~i~~fL~k 271 (271)
T d1va4a_ 213 PTLVIHGDGDQIVPFETTGKVAAELIKGA--ELKVY--KDAPHGFAVT------HAQQLNEDLLAFLKR 271 (271)
T ss_dssp CEEEEEETTCSSSCGGGTHHHHHHHSTTC--EEEEE--TTCCTTHHHH------THHHHHHHHHHHHTC
T ss_pred ceeecccCCCCCCCHHHHHHHHHHhCCCC--EEEEE--CCCCCchHHh------CHHHHHHHHHHHHCc
Confidence 9999999999999998876664 567876 88888 9999999998 899999999999985
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.76 E-value=1e-18 Score=163.28 Aligned_cols=242 Identities=16% Similarity=0.179 Sum_probs=136.8
Q ss_pred ccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcC
Q 012210 161 RQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSK 240 (468)
Q Consensus 161 ~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~ 240 (468)
|.+.+-...+..++..|. .+||+|+++|++|++..-. ...++++.+++ +|+.++++.+..
T Consensus 26 HG~~~~~~~~~~~~~~l~---~~~~~vi~~D~~G~G~S~~-------------~~~~~~~~~~~-~~~~~~l~~l~~--- 85 (273)
T d1a8sa_ 26 HGWPLNADSWESQMIFLA---AQGYRVIAHDRRGHGRSSQ-------------PWSGNDMDTYA-DDLAQLIEHLDL--- 85 (273)
T ss_dssp CCTTCCGGGGHHHHHHHH---HTTCEEEEECCTTSTTSCC-------------CSSCCSHHHHH-HHHHHHHHHTTC---
T ss_pred CCCCCCHHHHHHHHHHHH---hCCCEEEEEechhcCcccc-------------ccccccccchH-HHHHHHHHhcCc---
Confidence 444444445566666666 8999999999999976211 01235677886 888888887643
Q ss_pred CCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHh
Q 012210 241 PKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAA 320 (468)
Q Consensus 241 ~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (468)
.+.+++|||+||.++..+++.+. |++|.+++++++............. .........+....
T Consensus 86 ---~~~~lvg~s~gG~~~~~~~a~~~----p~~v~~~~l~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~ 147 (273)
T d1a8sa_ 86 ---RDAVLFGFSTGGGEVARYIGRHG----TARVAKAGLISAVPPLMLKTEANPG-----------GLPMEVFDGIRQAS 147 (273)
T ss_dssp ---CSEEEEEETHHHHHHHHHHHHHC----STTEEEEEEESCCCSCCBCCSSCTT-----------SBCHHHHHHHHHHH
T ss_pred ---cceeeeeeccCCccchhhhhhhh----hhccceeEEEecccccccccccccc-----------cchhhhhhhHHHHH
Confidence 28899999999877776665431 7889999999765433221100000 00000000000000
Q ss_pred cCCCCCchhHHHHHHHhhhc---c-ccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCcc
Q 012210 321 YPLSSSPPYVFSWLNNLISA---E-DMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIP 396 (468)
Q Consensus 321 ~~~~~~~~~~~~~l~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP 396 (468)
.. ........+....... . ........+........... .........+.. .++...+++|++|
T Consensus 148 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---------~~~~~~~~~i~~P 215 (273)
T d1a8sa_ 148 LA--DRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGH-KNAYDCIKAFSE---------TDFTEDLKKIDVP 215 (273)
T ss_dssp HH--HHHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCH-HHHHHHHHHHHH---------CCCHHHHHTCCSC
T ss_pred HH--HHHHHHHHHhhhhhhhcccchhhhhHHHHHHHHHhhcccch-hhhhhhHHHhhh---------hhhhHHHHhhccc
Confidence 00 0000000000000000 0 00112222222111111111 112222222211 2234567889999
Q ss_pred EEEEecCCCCcCCHHHHHHHHH-hCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHh
Q 012210 397 ILAIAGDQDLICPPEAVEETVK-LLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLG 462 (468)
Q Consensus 397 vLiI~G~~D~ivp~~~~~~l~~-~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~ 462 (468)
+|+|+|++|.++|.+....+.+ .+++. +++++ |++||+.+.+ +|+++++.|.+||+
T Consensus 216 vlii~g~~D~~~~~~~~~~~~~~~~~~~--~~~~i--~~~gH~~~~e------~p~~~~~~i~~Fl~ 272 (273)
T d1a8sa_ 216 TLVVHGDADQVVPIEASGIASAALVKGS--TLKIY--SGAPHGLTDT------HKDQLNADLLAFIK 272 (273)
T ss_dssp EEEEEETTCSSSCSTTTHHHHHHHSTTC--EEEEE--TTCCSCHHHH------THHHHHHHHHHHHH
T ss_pred eEEEecCCCCCCCHHHHHHHHHHhCCCC--EEEEE--CCCCCchHHh------CHHHHHHHHHHHcC
Confidence 9999999999999887777654 45766 88888 9999999998 99999999999996
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Probab=99.73 E-value=7.8e-18 Score=162.38 Aligned_cols=83 Identities=12% Similarity=-0.063 Sum_probs=64.9
Q ss_pred hhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHH
Q 012210 181 IEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYA 260 (468)
Q Consensus 181 l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~ 260 (468)
+..||+|+++|++|++..-. .....+++..+++ +|+.++++++... +++++||||||.+++.
T Consensus 57 l~~~~~Vi~~D~rG~G~S~~-----------~~~~~~~~~~~~~-~dl~~~~~~l~~~------~~~lvGhS~Gg~ia~~ 118 (313)
T d1azwa_ 57 DPAKYRIVLFDQRGSGRSTP-----------HADLVDNTTWDLV-ADIERLRTHLGVD------RWQVFGGSWGSTLALA 118 (313)
T ss_dssp CTTTEEEEEECCTTSTTSBS-----------TTCCTTCCHHHHH-HHHHHHHHHTTCS------SEEEEEETHHHHHHHH
T ss_pred hhcCCEEEEEeccccCCCCc-----------cccccchhHHHHH-HHHHHHHHhhccc------cceeEEecCCcHHHHH
Confidence 36899999999999976311 0112345677776 8888888876543 8999999999999999
Q ss_pred HHHhcCCCCCcccccceeEEcccccc
Q 012210 261 MLSRCGFEGRESRLAAIVTLASSLDY 286 (468)
Q Consensus 261 ~a~~~~~~~~p~~V~~lVllap~~~~ 286 (468)
+|.++ |++|.++|++++....
T Consensus 119 ~a~~~-----p~~v~~lv~~~~~~~~ 139 (313)
T d1azwa_ 119 YAQTH-----PQQVTELVLRGIFLLR 139 (313)
T ss_dssp HHHHC-----GGGEEEEEEESCCCCC
T ss_pred HHHHh-----hhceeeeeEecccccc
Confidence 99998 9999999999875543
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=99.73 E-value=5.6e-17 Score=160.80 Aligned_cols=213 Identities=14% Similarity=0.135 Sum_probs=137.6
Q ss_pred cccccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHH
Q 012210 154 LSSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAME 233 (468)
Q Consensus 154 ~~~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~ 233 (468)
.+.++..+++.|....+..+++.|+ .+||.|+++|+.|++.... .... ..++. .++.++++
T Consensus 131 ~P~Vi~~hG~~~~~e~~~~~~~~l~---~~G~~vl~~D~~G~G~s~~----------~~~~-----~~~~~-~~~~~v~d 191 (360)
T d2jbwa1 131 HPAVIMLGGLESTKEESFQMENLVL---DRGMATATFDGPGQGEMFE----------YKRI-----AGDYE-KYTSAVVD 191 (360)
T ss_dssp EEEEEEECCSSCCTTTTHHHHHHHH---HTTCEEEEECCTTSGGGTT----------TCCS-----CSCHH-HHHHHHHH
T ss_pred ceEEEEeCCCCccHHHHHHHHHHHH---hcCCEEEEEccccccccCc----------cccc-----cccHH-HHHHHHHH
Confidence 3444544455555556667788888 9999999999999865211 1000 11222 45667888
Q ss_pred HHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcch
Q 012210 234 YIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPL 313 (468)
Q Consensus 234 ~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (468)
++......+.++|+++||||||.+++.+|+. .++|+++|.+++..++......
T Consensus 192 ~l~~~~~vd~~rI~l~G~S~GG~~Al~~A~~------~pri~a~V~~~~~~~~~~~~~~--------------------- 244 (360)
T d2jbwa1 192 LLTKLEAIRNDAIGVLGRSLGGNYALKSAAC------EPRLAACISWGGFSDLDYWDLE--------------------- 244 (360)
T ss_dssp HHHHCTTEEEEEEEEEEETHHHHHHHHHHHH------CTTCCEEEEESCCSCSTTGGGS---------------------
T ss_pred HHHhcccccccceeehhhhcccHHHHHHhhc------CCCcceEEEEcccccHHHHhhh---------------------
Confidence 8887765555689999999999999999987 5689999998876554221000
Q ss_pred HhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCcc
Q 012210 314 GALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKC 393 (468)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I 393 (468)
.+.....+..... .............. ++....+.+|
T Consensus 245 -------------~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~------------~~~~~~~~~i 281 (360)
T d2jbwa1 245 -------------TPLTKESWKYVSK------------------VDTLEEARLHVHAA------------LETRDVLSQI 281 (360)
T ss_dssp -------------CHHHHHHHHHHTT------------------CSSHHHHHHHHHHH------------TCCTTTGGGC
T ss_pred -------------hhhhhHHHHHhcc------------------CCchHHHHHHHHhh------------cchhhhHhhC
Confidence 0000000000000 00000111111111 1123467889
Q ss_pred CccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 394 NIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 394 ~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
+||+|+++|++|. +|++.++.+++.+++.++++.++ ++++|..+. .+.+..+.|.+||.++.
T Consensus 282 ~~P~Lii~G~~D~-vp~~~~~~l~~~~~~~~~~l~~~--~~g~H~~~~-------~~~~~~~~i~dWl~~~L 343 (360)
T d2jbwa1 282 ACPTYILHGVHDE-VPLSFVDTVLELVPAEHLNLVVE--KDGDHCCHN-------LGIRPRLEMADWLYDVL 343 (360)
T ss_dssp CSCEEEEEETTSS-SCTHHHHHHHHHSCGGGEEEEEE--TTCCGGGGG-------GTTHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCC-cCHHHHHHHHHhcCCCCeEEEEE--CCCCcCCCc-------ChHHHHHHHHHHHHHHh
Confidence 9999999999998 58999999999999876677776 888887653 56778889999998864
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Probab=99.71 E-value=8.2e-17 Score=155.62 Aligned_cols=208 Identities=11% Similarity=0.127 Sum_probs=126.7
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.+++.+-..++..+++.|+ .+||.|+++|++||++.-. +. ..++++.++. +|+.+++++++
T Consensus 35 Vvi~HG~~~~~~~~~~~a~~L~---~~G~~Vi~~D~rGh~G~S~---------g~---~~~~~~~~~~-~dl~~vi~~l~ 98 (302)
T d1thta_ 35 ILIASGFARRMDHFAGLAEYLS---TNGFHVFRYDSLHHVGLSS---------GS---IDEFTMTTGK-NSLCTVYHWLQ 98 (302)
T ss_dssp EEEECTTCGGGGGGHHHHHHHH---TTTCCEEEECCCBCC--------------------CCCHHHHH-HHHHHHHHHHH
T ss_pred EEEeCCCcchHHHHHHHHHHHH---HCCCEEEEecCCCCCCCCC---------Cc---ccCCCHHHHH-HHHHHHHHhhh
Confidence 4554555555567788888888 9999999999999844211 11 1345666775 99999999998
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhH
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAL 316 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
.+ +. .+++++||||||.+++.+|. +.+++++|+.+|....... +........+.. ....
T Consensus 99 ~~-~~--~~i~lvG~SmGG~ial~~A~-------~~~v~~li~~~g~~~~~~~---~~~~~~~~~~~~-------~~~~- 157 (302)
T d1thta_ 99 TK-GT--QNIGLIAASLSARVAYEVIS-------DLELSFLITAVGVVNLRDT---LEKALGFDYLSL-------PIDE- 157 (302)
T ss_dssp HT-TC--CCEEEEEETHHHHHHHHHTT-------TSCCSEEEEESCCSCHHHH---HHHHHSSCGGGS-------CGGG-
T ss_pred cc-CC--ceeEEEEEchHHHHHHHHhc-------ccccceeEeecccccHHHH---HHHHHhhccchh-------hhhh-
Confidence 75 33 39999999999999998885 4468999998876543211 111110000000 0000
Q ss_pred HHHhcCCCCCchhHHHHHHHhhhccccCCHHH-HHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCc
Q 012210 317 LTAAYPLSSSPPYVFSWLNNLISAEDMMHPEL-LKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNI 395 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~v 395 (468)
.+. ............. ....+.... . ........+.+|++
T Consensus 158 ----~~~------------~~~~~~~~~~~~~~~~~~~~~~~-~----------------------~~~~~~~~~~~i~~ 198 (302)
T d1thta_ 158 ----LPN------------DLDFEGHKLGSEVFVRDCFEHHW-D----------------------TLDSTLDKVANTSV 198 (302)
T ss_dssp ----CCS------------EEEETTEEEEHHHHHHHHHHTTC-S----------------------SHHHHHHHHTTCCS
T ss_pred ----ccc------------cccccccchhhHHHHHHHHHhHH-H----------------------HHHHHHHHHhhcCC
Confidence 000 0000000000000 000000000 0 00011245678999
Q ss_pred cEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCccc
Q 012210 396 PILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYD 442 (468)
Q Consensus 396 PvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e 442 (468)
|+|+++|++|.++|++.++++++.++..+++++++ ++++|...-+
T Consensus 199 PvLii~G~~D~~V~~~~~~~l~~~i~s~~~kl~~~--~g~~H~l~e~ 243 (302)
T d1thta_ 199 PLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSL--LGSSHDLGEN 243 (302)
T ss_dssp CEEEEEETTCTTSCHHHHHHHHTTCTTCCEEEEEE--TTCCSCTTSS
T ss_pred CEEEEEeCCCCccCHHHHHHHHHhCCCCCceEEEe--cCCCcccccC
Confidence 99999999999999999999999999877899988 8999976543
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Probab=99.70 E-value=1.4e-16 Score=149.14 Aligned_cols=68 Identities=18% Similarity=0.355 Sum_probs=56.9
Q ss_pred cccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccCC
Q 012210 388 DHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDSV 467 (468)
Q Consensus 388 ~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~~ 467 (468)
..+.++++|+|+++|++|.+++ ...+.+.+.+|+. +++++ ++||+.|.| .|++|.+.|.+||++..++
T Consensus 228 ~~~~~~~~P~l~i~g~~d~~~~-~~~~~~~~~~p~~--~~~~~---~~GH~~~~e------~P~~v~~~i~~fl~~~~~a 295 (298)
T d1mj5a_ 228 GWLSESPIPKLFINAEPGALTT-GRMRDFCRTWPNQ--TEITV---AGAHFIQED------SPDEIGAAIAAFVRRLRPA 295 (298)
T ss_dssp HHHTTCCSCEEEEEEEECSSSS-HHHHHHHTTCSSE--EEEEE---EESSCGGGT------CHHHHHHHHHHHHHHHSCC
T ss_pred hhhhhcceeEEEEecCCCCcCh-HHHHHHHHHCCCC--EEEEe---CCCCchHHh------CHHHHHHHHHHHHhhhccc
Confidence 3567899999999999998776 5567888999875 55554 679999998 9999999999999987654
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Probab=99.69 E-value=6e-16 Score=142.19 Aligned_cols=161 Identities=20% Similarity=0.211 Sum_probs=124.5
Q ss_pred hhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEE
Q 012210 170 IRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAI 249 (468)
Q Consensus 170 i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lv 249 (468)
++.+++.|+ +.||.|+++|+.|++... +. ++ ...... +|+.++++++..+.... +++++
T Consensus 56 ~~~la~~l~---~~G~~vlrfd~RG~G~S~----------g~----~~-~~~~~~-~D~~a~~~~~~~~~~~~--~v~l~ 114 (218)
T d2fuka1 56 VTMAARALR---ELGITVVRFNFRSVGTSA----------GS----FD-HGDGEQ-DDLRAVAEWVRAQRPTD--TLWLA 114 (218)
T ss_dssp HHHHHHHHH---TTTCEEEEECCTTSTTCC----------SC----CC-TTTHHH-HHHHHHHHHHHHHCTTS--EEEEE
T ss_pred HHHHHHHHH---HcCCeEEEeecCCCccCC----------Cc----cC-cCcchH-HHHHHHHHHHhhcccCc--eEEEE
Confidence 678899999 999999999999886531 11 11 123444 89999999999987665 99999
Q ss_pred EEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCchh
Q 012210 250 GHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPY 329 (468)
Q Consensus 250 GhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (468)
||||||.+++.+|.+ .+++++|+++|+.....
T Consensus 115 G~S~Gg~va~~~a~~-------~~~~~lil~ap~~~~~~----------------------------------------- 146 (218)
T d2fuka1 115 GFSFGAYVSLRAAAA-------LEPQVLISIAPPAGRWD----------------------------------------- 146 (218)
T ss_dssp EETHHHHHHHHHHHH-------HCCSEEEEESCCBTTBC-----------------------------------------
T ss_pred EEcccchhhhhhhcc-------cccceEEEeCCcccchh-----------------------------------------
Confidence 999999999998875 35789999887432000
Q ss_pred HHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecCCCCcCC
Q 012210 330 VFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICP 409 (468)
Q Consensus 330 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~D~ivp 409 (468)
....++.+|+|+|+|++|.++|
T Consensus 147 ----------------------------------------------------------~~~~~~~~P~Lvi~G~~D~~vp 168 (218)
T d2fuka1 147 ----------------------------------------------------------FSDVQPPAQWLVIQGDADEIVD 168 (218)
T ss_dssp ----------------------------------------------------------CTTCCCCSSEEEEEETTCSSSC
T ss_pred ----------------------------------------------------------hhccccccceeeEecCCCcCcC
Confidence 0012356899999999999999
Q ss_pred HHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccCC
Q 012210 410 PEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDSV 467 (468)
Q Consensus 410 ~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~~ 467 (468)
++.++++++.++. .++++++ |+++|+.+- ..+++.+.+.+|++++.+.
T Consensus 169 ~~~~~~l~~~~~~-~~~l~~i--~ga~H~f~~-------~~~~l~~~~~~~v~~~l~~ 216 (218)
T d2fuka1 169 PQAVYDWLETLEQ-QPTLVRM--PDTSHFFHR-------KLIDLRGALQHGVRRWLPA 216 (218)
T ss_dssp HHHHHHHHTTCSS-CCEEEEE--TTCCTTCTT-------CHHHHHHHHHHHHGGGCSS
T ss_pred HHHHHHHHHHccC-CceEEEe--CCCCCCCCC-------CHHHHHHHHHHHHHHhcCC
Confidence 9999999998886 4578888 999996543 3367899999999988653
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Probab=99.68 E-value=5.7e-16 Score=141.84 Aligned_cols=245 Identities=9% Similarity=0.065 Sum_probs=125.7
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
++-.|++.|-...++.+++.|+ ..||+|+++|+.|++...... +...... ......+.
T Consensus 19 ivllHG~~~~~~~~~~~~~~L~---~~g~~vi~~Dl~G~G~s~~~~--------------~~~~~~~-----~~~~~~~~ 76 (264)
T d1r3da_ 19 VVLVHGLLGSGADWQPVLSHLA---RTQCAALTLDLPGHGTNPERH--------------CDNFAEA-----VEMIEQTV 76 (264)
T ss_dssp EEEECCTTCCGGGGHHHHHHHT---TSSCEEEEECCTTCSSCC---------------------CHH-----HHHHHHHH
T ss_pred EEEeCCCCCCHHHHHHHHHHHH---hCCCEEEEEeccccccccccc--------------ccccchh-----hhhhhhcc
Confidence 4444566666666778888887 889999999999997521100 0011111 11111111
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhH
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGAL 316 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
........+++++||||||.+++.++.++ ++.+.+++.+.+................... ...
T Consensus 77 ~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~ 139 (264)
T d1r3da_ 77 QAHVTSEVPVILVGYSLGGRLIMHGLAQG-----AFSRLNLRGAIIEGGHFGLQENEEKAARWQH------------DQQ 139 (264)
T ss_dssp HTTCCTTSEEEEEEETHHHHHHHHHHHHT-----TTTTSEEEEEEEESCCCCCCSHHHHHHHHHH------------HHH
T ss_pred cccccccCceeeeeecchHHHHHHHHHhC-----chhccccccccccCCCccccchhhhhhhhhh------------hhh
Confidence 11112234899999999999999999997 8888888877554332221111000000000 000
Q ss_pred HHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCcc
Q 012210 317 LTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIP 396 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP 396 (468)
+...............+...... .................... ............ . ........+..+++|
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~---~~~~~~~~l~~~~~p 210 (264)
T d1r3da_ 140 WAQRFSQQPIEHVLSDWYQQAVF--SSLNHEQRQTLIAQRSANLG-SSVAHMLLATSL---A---KQPYLLPALQALKLP 210 (264)
T ss_dssp HHHHHHHSCHHHHHHHHTTSGGG--TTCCHHHHHHHHHHHTTSCH-HHHHHHHHHTCG---G---GCCCCHHHHHTCSSC
T ss_pred hhhhhhhhhhhhhhhhhhhhhhh--cccchHHHHHHHHHHhhhhh-hhhHHhhhhccc---c---ccccchhhhhccCcc
Confidence 00000000000000011100000 01122222222222222221 112222111110 0 111234467789999
Q ss_pred EEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 397 ILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 397 vLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
+++|+|++|..+ ..+.+. ++. +++++ +++||+.|.| +|+++.+.|.+||++..
T Consensus 211 ~l~i~G~~D~~~-----~~~~~~-~~~--~~~~i--~~~gH~~~~e------~P~~~~~~i~~fl~~l~ 263 (264)
T d1r3da_ 211 IHYVCGEQDSKF-----QQLAES-SGL--SYSQV--AQAGHNVHHE------QPQAFAKIVQAMIHSII 263 (264)
T ss_dssp EEEEEETTCHHH-----HHHHHH-HCS--EEEEE--TTCCSCHHHH------CHHHHHHHHHHHHHHHC
T ss_pred eEEEEeCCcHHH-----HHHHhc-CCC--eEEEE--CCCCCchHHH------CHHHHHHHHHHHHHhcc
Confidence 999999999654 223332 454 78888 9999999998 99999999999998753
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Probab=99.64 E-value=1.3e-15 Score=141.24 Aligned_cols=198 Identities=17% Similarity=0.189 Sum_probs=134.8
Q ss_pred cccccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccc----hHHHhhcccceEeecCChhhHHhhhHH
Q 012210 154 LSSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFST----IDDFQKQLDLIVQYDWDFDHYLEEDVP 229 (468)
Q Consensus 154 ~~~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~----~~~l~~~~~~~~~~D~~~~~~~~~D~~ 229 (468)
.+.+|..++..|++.++++++++|+ .+||.|++||+++.+...... ...... ........+..... .|+.
T Consensus 28 ~P~vl~~h~~~G~~~~~~~~a~~lA---~~Gy~vl~pd~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~d~~ 101 (233)
T d1dina_ 28 APVIVIAQEIFGVNAFMRETVSWLV---DQGYAAVCPDLYARQAPGTALDPQDERQREQ--AYKLWQAFDMEAGV-GDLE 101 (233)
T ss_dssp EEEEEEECCTTBSCHHHHHHHHHHH---HTTCEEEEECGGGGTSTTCBCCTTSHHHHHH--HHHHHHTCCHHHHH-HHHH
T ss_pred ceEEEEeCCCCCCCHHHHHHHHHHH---hcCCcceeeeeccCCCcCcccChHHHHHHHH--HHHHhhhhhhHHHH-HHHH
Confidence 3556777788899999999999999 999999999998865532211 111100 00001122344444 8999
Q ss_pred HHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCC
Q 012210 230 AAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVP 309 (468)
Q Consensus 230 a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (468)
++++++...... .++|.++|+|+||.+++.++.. +.+.+.+.+.+...
T Consensus 102 aa~~~l~~~~~~-~~~i~~~G~s~Gg~~a~~~a~~-------~~~~~~~~~~~~~~------------------------ 149 (233)
T d1dina_ 102 AAIRYARHQPYS-NGKVGLVGYCLGGALAFLVAAK-------GYVDRAVGYYGVGL------------------------ 149 (233)
T ss_dssp HHHHHHHTSTTE-EEEEEEEEETHHHHHHHHHHHH-------TCSSEEEEESCSCG------------------------
T ss_pred HHHHHHHhCCCC-CCceEEEEecccccceeecccc-------cccceecccccccc------------------------
Confidence 999999876443 3689999999999999998865 34555444322100
Q ss_pred CcchHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccc
Q 012210 310 VVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDH 389 (468)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (468)
. .....
T Consensus 150 -----------------------------------~---------------------------------------~~~~~ 155 (233)
T d1dina_ 150 -----------------------------------E---------------------------------------KQLNK 155 (233)
T ss_dssp -----------------------------------G---------------------------------------GGGGG
T ss_pred -----------------------------------c---------------------------------------cchhh
Confidence 0 00123
Q ss_pred cCccCccEEEEecCCCCcCCHHHHHHHHHhCCC-CceeEEEecCCCCCCCCcccc--cccccchhhHHHHHHHHHhhcc
Q 012210 390 IHKCNIPILAIAGDQDLICPPEAVEETVKLLPE-DLVTYKVFGEPSGPHYAHYDL--VGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 390 l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~-~~~~~~v~~~~~agH~~H~e~--~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
+.+|++|+|+++|++|.++|++..+.+.+.+.. ...+++++ |+++|..+.+. -+...+.++.++.+++||....
T Consensus 156 ~~~i~~Pvl~~~G~~D~~vp~e~~~~~~~~~~~~~~~~~~~y--~ga~HgF~~~~~~~y~~~aa~~a~~r~~~ffa~~~ 232 (233)
T d1dina_ 156 VPEVKHPALFHMGGQDHFVPAPSRQLITEGFGANPLLQVHWY--EEAGHSFARTSSSGYVASAAALANERTLDFLAPLQ 232 (233)
T ss_dssp GGGCCSCEEEEEETTCTTSCHHHHHHHHHHHTTCTTEEEEEE--TTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGGGC
T ss_pred hhccCCcceeeecccccCCCHHHHHHHHHHHhcCCCEEEEEE--CCCCcCCCCCCCccCCHHHHHHHHHHHHHHHHcCc
Confidence 457889999999999999999998888776543 24567777 99999654331 1233455677999999998754
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Probab=99.63 E-value=9.5e-16 Score=144.26 Aligned_cols=98 Identities=13% Similarity=-0.019 Sum_probs=67.6
Q ss_pred ccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcC
Q 012210 161 RQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSK 240 (468)
Q Consensus 161 ~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~ 240 (468)
|++.|-....+.+.. .+.+||+|+++|++|++..... .....++...+. +|+..+++.+ +
T Consensus 41 HG~~~~~~~w~~~~~----~l~~~~~vi~~D~rG~G~S~~~-----------~~~~~~~~~~~~-~d~~~~~~~~----~ 100 (313)
T d1wm1a_ 41 HGGPGGGISPHHRQL----FDPERYKVLLFDQRGCGRSRPH-----------ASLDNNTTWHLV-ADIERLREMA----G 100 (313)
T ss_dssp CCTTTCCCCGGGGGG----SCTTTEEEEEECCTTSTTCBST-----------TCCTTCSHHHHH-HHHHHHHHHT----T
T ss_pred CCCCCcccchHHHHH----HhhcCCEEEEEeCCCccccccc-----------ccccccchhhHH-HHHHhhhhcc----C
Confidence 555555555555443 3357999999999999763111 111223444554 6666666554 3
Q ss_pred CCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccc
Q 012210 241 PKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 241 ~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
.. +++++|||+||.+++.+|..+ +++|.+++++++...
T Consensus 101 ~~--~~~~vg~s~g~~~~~~~a~~~-----~~~v~~~v~~~~~~~ 138 (313)
T d1wm1a_ 101 VE--QWLVFGGSWGSTLALAYAQTH-----PERVSEMVLRGIFTL 138 (313)
T ss_dssp CS--SEEEEEETHHHHHHHHHHHHC-----GGGEEEEEEESCCCC
T ss_pred CC--cceeEeeecCCchhhHHHHHH-----hhhheeeeecccccc
Confidence 33 999999999999999999997 899999999987554
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Probab=99.63 E-value=4.9e-15 Score=131.57 Aligned_cols=64 Identities=14% Similarity=0.239 Sum_probs=51.8
Q ss_pred ccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 392 KCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 392 ~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
++.+|+|+|+|++|.++|++.++.+++.++ + +++++ ++++|+...+-. ....++.+.|.+||.+
T Consensus 123 ~~~~p~lvi~g~~D~~vp~~~~~~l~~~~~-~--~~~~~--~~~gH~~~~~~~---~~~~~~~~~l~~~~~~ 186 (186)
T d1uxoa_ 123 ESAKHRAVIASKDDQIVPFSFSKDLAQQID-A--ALYEV--QHGGHFLEDEGF---TSLPIVYDVLTSYFSK 186 (186)
T ss_dssp HHEEEEEEEEETTCSSSCHHHHHHHHHHTT-C--EEEEE--TTCTTSCGGGTC---SCCHHHHHHHHHHHHC
T ss_pred cCCCCEEEEecCCCCCCCHHHHHHHHHHcC-C--EEEEe--CCCCCcCccccC---cccHHHHHHHHHHHcC
Confidence 357899999999999999999999999984 4 78888 999998765421 2335788899999864
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Probab=99.61 E-value=2.5e-15 Score=143.83 Aligned_cols=230 Identities=16% Similarity=0.082 Sum_probs=137.8
Q ss_pred ccccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHh-hcccc----eEeecCChhhHHhhhHH
Q 012210 155 SSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQ-KQLDL----IVQYDWDFDHYLEEDVP 229 (468)
Q Consensus 155 ~~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~-~~~~~----~~~~D~~~~~~~~~D~~ 229 (468)
+.++..++..|-.......+..|+ .+||.|+++|+.|++..-........ ..... ..........+. .|..
T Consensus 83 P~vv~~HG~~~~~~~~~~~~~~la---~~Gy~vi~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~ 158 (318)
T d1l7aa_ 83 PAIVKYHGYNASYDGEIHEMVNWA---LHGYATFGMLVRGQQRSEDTSISPHGHALGWMTKGILDKDTYYYRGVY-LDAV 158 (318)
T ss_dssp EEEEEECCTTCCSGGGHHHHHHHH---HTTCEEEEECCTTTSSSCCCCCCSSCCSSSSTTTTTTCTTTCHHHHHH-HHHH
T ss_pred eEEEEecCCCCCccchHHHHHHHH---HCCCEEEEEeeCCCCCCCCCcccchhhhhcchhhchhhhhhhhhHHHH-HHHH
Confidence 345666666677777788888888 99999999999998764211100000 00000 000001122333 7888
Q ss_pred HHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCC
Q 012210 230 AAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVP 309 (468)
Q Consensus 230 a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (468)
.+++++..+...+..++.++|+|+||.+++..+.. .+++.+++...+.......
T Consensus 159 ~~~~~l~~~~~v~~~~i~~~G~s~Gg~~~~~~~~~------~~~~~~~~~~~~~~~~~~~-------------------- 212 (318)
T d1l7aa_ 159 RALEVISSFDEVDETRIGVTGGSQGGGLTIAAAAL------SDIPKAAVADYPYLSNFER-------------------- 212 (318)
T ss_dssp HHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHH------CSCCSEEEEESCCSCCHHH--------------------
T ss_pred HHHHHHHhcccccCcceEEEeeccccHHHHHHhhc------CcccceEEEeccccccHHH--------------------
Confidence 88899988766655679999999999999999988 5677877766654321110
Q ss_pred CcchHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccc
Q 012210 310 VVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDH 389 (468)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (468)
......... . .....+.. .. ..... ......... .......
T Consensus 213 ------~~~~~~~~~-~-~~~~~~~~-------------------~~--~~~~~-~~~~~~~~~---------~~~~~~~ 253 (318)
T d1l7aa_ 213 ------AIDVALEQP-Y-LEINSFFR-------------------RN--GSPET-EVQAMKTLS---------YFDIMNL 253 (318)
T ss_dssp ------HHHHCCSTT-T-THHHHHHH-------------------HS--CCHHH-HHHHHHHHH---------TTCHHHH
T ss_pred ------Hhhcccccc-c-chhhhhhh-------------------cc--ccccc-ccccccccc---------ccccccc
Confidence 000000000 0 00000000 00 00000 000011000 0112235
Q ss_pred cCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccC
Q 012210 390 IHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 466 (468)
Q Consensus 390 l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~ 466 (468)
+.+|++|+|+++|++|.++|++.+..+++.++. .++++++ ++++|... +++.+.+++||+++.+
T Consensus 254 ~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~-~~~l~~~--~~~gH~~~----------~~~~~~~~~fl~~~Lk 317 (318)
T d1l7aa_ 254 ADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLET-KKELKVY--RYFGHEYI----------PAFQTEKLAFFKQILK 317 (318)
T ss_dssp GGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCS-SEEEEEE--TTCCSSCC----------HHHHHHHHHHHHHHHC
T ss_pred cccCCCCEEEEEECCCCCcCHHHHHHHHHHcCC-CcEEEEE--CCCCCCCc----------HHHHHHHHHHHHHhCC
Confidence 678999999999999999999999999999985 5788888 88888543 4566778888888753
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=99.59 E-value=6.4e-15 Score=138.45 Aligned_cols=206 Identities=18% Similarity=0.149 Sum_probs=133.7
Q ss_pred cccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCc
Q 012210 166 IAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGK 245 (468)
Q Consensus 166 ~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~ 245 (468)
....+..+++.|+ .+||.|++||..++.+... .+..... .++...+ .+|+.++++++..+.... +
T Consensus 53 ~~~~~~~~~~~la---~~G~~v~~~d~r~~~~~g~----~~~~~~~----~~~~~~~--~~D~~~~~~~l~~~~~~~--~ 117 (260)
T d2hu7a2 53 DSDSWDTFAASLA---AAGFHVVMPNYRGSTGYGE----EWRLKII----GDPCGGE--LEDVSAAARWARESGLAS--E 117 (260)
T ss_dssp CCSSCCHHHHHHH---HHTCEEEEECCTTCSSSCH----HHHHTTT----TCTTTHH--HHHHHHHHHHHHHTTCEE--E
T ss_pred CCccccHHHHHHH---hhccccccceeeecccccc----ccccccc----cccchhh--hhhhcccccccccccccc--e
Confidence 3455677888888 8999999999887654211 1111111 1112222 389999999999876544 8
Q ss_pred EEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCC
Q 012210 246 LLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSS 325 (468)
Q Consensus 246 v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (468)
+.++|+|+||.+++.++..+ ++.+++++..++..+.... .. .
T Consensus 118 ~~i~g~s~gg~~~~~~~~~~-----~~~~~a~i~~~~~~~~~~~---------------------------~~----~-- 159 (260)
T d2hu7a2 118 LYIMGYSYGGYMTLCALTMK-----PGLFKAGVAGASVVDWEEM---------------------------YE----L-- 159 (260)
T ss_dssp EEEEEETHHHHHHHHHHHHS-----TTSSSEEEEESCCCCHHHH---------------------------HH----T--
T ss_pred eeccccccccccccchhccC-----Ccccccccccccchhhhhh---------------------------hc----c--
Confidence 99999999999999999986 7888888887775442110 00 0
Q ss_pred CchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecCCC
Q 012210 326 SPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQD 405 (468)
Q Consensus 326 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~D 405 (468)
.......+...... ...+.+ .. ......+.++++|+|++||++|
T Consensus 160 ~~~~~~~~~~~~~~----~~~~~~--------------------~~------------~~~~~~~~~~~~P~liihG~~D 203 (260)
T d2hu7a2 160 SDAAFRNFIEQLTG----GSREIM--------------------RS------------RSPINHVDRIKEPLALIHPQND 203 (260)
T ss_dssp CCHHHHHHHHHHHC----SCHHHH--------------------HH------------TCGGGCGGGCCSCEEEEEETTC
T ss_pred cccccccccccccc----cccccc--------------------cc------------cchhhcccccCCCceeeecccC
Confidence 00000011000000 011111 00 0123456789999999999999
Q ss_pred CcCCHHHHHHHHHhCCCC--ceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccCC
Q 012210 406 LICPPEAVEETVKLLPED--LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDSV 467 (468)
Q Consensus 406 ~ivp~~~~~~l~~~ip~~--~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~~ 467 (468)
.++|+..+.++++.+.+. ..+++++ |+++|..... ++..++++.+.+||.+|.++
T Consensus 204 ~~vp~~~~~~~~~~l~~~~~~~~~~~~--~g~~H~~~~~-----e~~~~~~~~~~~fl~~hl~~ 260 (260)
T d2hu7a2 204 SRTPLKPLLRLMGELLARGKTFEAHII--PDAGHAINTM-----EDAVKILLPAVFFLATQRER 260 (260)
T ss_dssp SSSCSHHHHHHHHHHHHTTCCEEEEEE--TTCCSSCCBH-----HHHHHHHHHHHHHHHHHHHC
T ss_pred ceecHHHHHHHHHHHHHCCCCeEEEEE--CcCCCCCCCh-----HhHHHHHHHHHHHHHHHhcC
Confidence 999999999998876533 4466777 8999975542 36678889999999998653
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Probab=99.57 E-value=1.9e-14 Score=135.61 Aligned_cols=174 Identities=18% Similarity=0.241 Sum_probs=131.3
Q ss_pred hccccccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHH
Q 012210 152 GKLSSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAA 231 (468)
Q Consensus 152 ~~~~~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~ 231 (468)
++.+.++..|++.|....++.++++|| .+||.|+++|..+.... ..... .|+.++
T Consensus 50 g~~P~Vv~~HG~~g~~~~~~~~a~~lA---~~Gy~V~~~d~~~~~~~---------------------~~~~~-~d~~~~ 104 (260)
T d1jfra_ 50 GTFGAVVISPGFTAYQSSIAWLGPRLA---SQGFVVFTIDTNTTLDQ---------------------PDSRG-RQLLSA 104 (260)
T ss_dssp CCEEEEEEECCTTCCGGGTTTHHHHHH---TTTCEEEEECCSSTTCC---------------------HHHHH-HHHHHH
T ss_pred CCccEEEEECCCCCCHHHHHHHHHHHH---hCCCEEEEEeeCCCcCC---------------------chhhH-HHHHHH
Confidence 344667888888899999999999999 99999999998765331 11223 777788
Q ss_pred HHHHHhhcC----CCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcC
Q 012210 232 MEYIRAQSK----PKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALN 307 (468)
Q Consensus 232 i~~l~~~~~----~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (468)
++++..... .+..+|.++|||+||.+++.++.. .++++++|.+++...
T Consensus 105 ~~~l~~~~~~~~~vD~~rI~v~G~S~GG~~al~aa~~------~~~~~A~v~~~~~~~---------------------- 156 (260)
T d1jfra_ 105 LDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKS------RTSLKAAIPLTGWNT---------------------- 156 (260)
T ss_dssp HHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHH------CTTCSEEEEESCCCS----------------------
T ss_pred HHHHHhhhhhhccccccceEEEeccccchHHHHHHhh------hccchhheeeecccc----------------------
Confidence 888876422 233589999999999999999987 678888888765211
Q ss_pred CCCcchHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccc
Q 012210 308 VPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYK 387 (468)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (468)
.
T Consensus 157 -------------------------------------------------------------------------------~ 157 (260)
T d1jfra_ 157 -------------------------------------------------------------------------------D 157 (260)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred cccCccCccEEEEecCCCCcCCHHH-HHHHHHhCCCC-ceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 388 DHIHKCNIPILAIAGDQDLICPPEA-VEETVKLLPED-LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 388 ~~l~~I~vPvLiI~G~~D~ivp~~~-~~~l~~~ip~~-~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
..+.++++|+|+++|+.|.++|++. .+.+++.++.. .+.++.+ ++++|..... ....+.+.++.||+.+.
T Consensus 158 ~~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~i--~ga~H~~~~~------~~~~~~~~~~~wl~~~L 229 (260)
T d1jfra_ 158 KTWPELRTPTLVVGADGDTVAPVATHSKPFYESLPGSLDKAYLEL--RGASHFTPNT------SDTTIAKYSISWLKRFI 229 (260)
T ss_dssp CCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCTTSCEEEEEE--TTCCTTGGGS------CCHHHHHHHHHHHHHHH
T ss_pred ccccccccceeEEecCCCCCCCHHHHHHHHHHhcccCCCEEEEEE--CCCccCCCCC------ChHHHHHHHHHHHHHHh
Confidence 1234578999999999999999865 66677777643 5567777 8999976654 44678889999998774
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.54 E-value=2.7e-15 Score=138.18 Aligned_cols=95 Identities=22% Similarity=0.221 Sum_probs=69.5
Q ss_pred ccccccccchhhHHHHHHhhhhc--CceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhh
Q 012210 161 RQSSAIAIQIRDLSQNLVNMIEE--GQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQ 238 (468)
Q Consensus 161 ~~~~G~~~~i~~~a~~la~~l~~--Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~ 238 (468)
|++.+-...++.++..|. .+ ||+|+++|++|++..... .++++++++ +|+.++++.+
T Consensus 9 HG~~~~~~~~~~~~~~l~---~~~~~~~v~~~d~~G~g~S~~~--------------~~~~~~~~~-~~l~~~l~~l--- 67 (268)
T d1pjaa_ 9 HGLFDSSYSFRHLLEYIN---ETHPGTVVTVLDLFDGRESLRP--------------LWEQVQGFR-EAVVPIMAKA--- 67 (268)
T ss_dssp CCTTCCGGGGHHHHHHHH---HHSTTCCEEECCSSCSGGGGSC--------------HHHHHHHHH-HHHHHHHHHC---
T ss_pred CCCCCCHHHHHHHHHHHH---hhCCCeEEEEeCCCCCCCCCCc--------------cccCHHHHH-HHHHHHHhcc---
Confidence 445455566677777776 54 899999999998763211 122455665 7777666654
Q ss_pred cCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcc-cccceeEEccccc
Q 012210 239 SKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRES-RLAAIVTLASSLD 285 (468)
Q Consensus 239 ~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~-~V~~lVllap~~~ 285 (468)
+ ++++++||||||.+++.+|.+| |+ +|+++|+++++..
T Consensus 68 -~---~~~~lvGhS~GG~ia~~~a~~~-----p~~~v~~lvl~~~~~~ 106 (268)
T d1pjaa_ 68 -P---QGVHLICYSQGGLVCRALLSVM-----DDHNVDSFISLSSPQM 106 (268)
T ss_dssp -T---TCEEEEEETHHHHHHHHHHHHC-----TTCCEEEEEEESCCTT
T ss_pred -C---CeEEEEccccHHHHHHHHHHHC-----CccccceEEEECCCCc
Confidence 2 2999999999999999999998 76 6999999987554
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=99.51 E-value=2.2e-14 Score=143.23 Aligned_cols=265 Identities=13% Similarity=0.062 Sum_probs=136.8
Q ss_pred ccccccccccccchhhHHHHHHhhhhcC------ceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEG------QLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPA 230 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~G------y~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a 230 (468)
||-.|++-|.....+.+...|+ ..| |+||+||+.|++..-.. .....|+..+++ .|+..
T Consensus 109 LlLlHG~P~s~~~w~~vi~~La---~~g~~~~~~f~VIaPDLpG~G~S~~P-----------~~~~~y~~~~~a-~~~~~ 173 (394)
T d1qo7a_ 109 IALLHGWPGSFVEFYPILQLFR---EEYTPETLPFHLVVPSLPGYTFSSGP-----------PLDKDFGLMDNA-RVVDQ 173 (394)
T ss_dssp EEEECCSSCCGGGGHHHHHHHH---HHCCTTTCCEEEEEECCTTSTTSCCC-----------CSSSCCCHHHHH-HHHHH
T ss_pred EEEeccccccHHHHHHHHHhhc---cccCCcccceeeecccccccCCCCCC-----------CCCCccCHHHHH-HHHHH
Confidence 4444666666777788888888 887 99999999999763110 011234566665 77777
Q ss_pred HHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCc----hhhhc
Q 012210 231 AMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLAD----PAQAL 306 (468)
Q Consensus 231 ~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~----~~~~~ 306 (468)
+++.+... +.+++|||+||.++..+++.+ ++.+.+++++..+.................. .....
T Consensus 174 l~~~lg~~------~~~~vg~~~Gg~v~~~~a~~~-----p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (394)
T d1qo7a_ 174 LMKDLGFG------SGYIIQGGDIGSFVGRLLGVG-----FDACKAVHLNLCAMRAPPEGPSIESLSAAEKEGIARMEKF 242 (394)
T ss_dssp HHHHTTCT------TCEEEEECTHHHHHHHHHHHH-----CTTEEEEEESCCCCCSCSSSCCGGGSCHHHHHHHHHHHHH
T ss_pred HHhhccCc------ceEEEEecCchhHHHHHHHHh-----hccccceeEeeecccccccccccccchhhhHHHHHHHHHH
Confidence 76666432 889999999999999999987 8888888887654433221100000000000 00000
Q ss_pred CCCCcchHhHHHHhcC------CCCCchhHHHHHHHhhhc--cccCCHHHHHHHHhh-ccCCCcHHHHHHHHHHHhcCcc
Q 012210 307 NVPVVPLGALLTAAYP------LSSSPPYVFSWLNNLISA--EDMMHPELLKKLVLN-NFCTIPAKLILQLTTAFREGGL 377 (468)
Q Consensus 307 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 377 (468)
...... ........+ ....+.....++...+.. ......+.+...... ............+...+....
T Consensus 243 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~- 320 (394)
T d1qo7a_ 243 MTDGLA-YAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVDKPLPSETILEMVSLYWLTESFPRAIHTYRETTPTAS- 320 (394)
T ss_dssp HHHSCH-HHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHSCSSCCCHHHHHHHHHHHHHTTCHHHHGGGHHHHCC----
T ss_pred HHhhhh-hhhhhhhhhhhhhhhcccccchhhhHHHHHhhhcccccCCHHHHHHHHHHHhhccccchhHHHHHHHhhccc-
Confidence 000000 000000000 000000011111110000 000111111111100 001111111111111111000
Q ss_pred cccCCccccccccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHH
Q 012210 378 RDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCI 457 (468)
Q Consensus 378 ~~~~~~~~~~~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I 457 (468)
............+|++|+++++|.+|...+++ .+.+.+++ .+.+.++ +++||+.|.| +|+++.+.|
T Consensus 321 --~~~~~~~~~~~~~i~vPtlv~~g~~D~~~~p~---~~~~~~~~-~~~~~~~--~~~GHf~~~E------~Pe~~a~~I 386 (394)
T d1qo7a_ 321 --APNGATMLQKELYIHKPFGFSFFPKDLCPVPR---SWIATTGN-LVFFRDH--AEGGHFAALE------RPRELKTDL 386 (394)
T ss_dssp --------CTTTTTCEEEEEEEEECTBSSSCCCH---HHHGGGEE-EEEEEEC--SSCBSCHHHH------CHHHHHHHH
T ss_pred --ccchhhhhccCCcccCCeEEEEeCCCccccHH---HHHHhccC-ceEEEEc--CCcCCchHHh------CHHHHHHHH
Confidence 00111123345679999999999999887765 35666665 3456666 8999999998 999999999
Q ss_pred HHHHhh
Q 012210 458 VQFLGR 463 (468)
Q Consensus 458 ~~FL~~ 463 (468)
.+||++
T Consensus 387 ~~Fl~~ 392 (394)
T d1qo7a_ 387 TAFVEQ 392 (394)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999986
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Probab=99.48 E-value=1.4e-13 Score=126.52 Aligned_cols=116 Identities=15% Similarity=0.005 Sum_probs=69.0
Q ss_pred ccccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHH
Q 012210 155 SSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEY 234 (468)
Q Consensus 155 ~~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~ 234 (468)
..++..|++.|....+..+++.|+ .+||.|++||+.+++.+......... .. ......... ..++.++...
T Consensus 25 ~~vl~lHG~~~~~~~~~~~~~~la---~~G~~V~~~D~~g~g~s~~~~~~~~~---~~--~~~~~~~~~-~~~~~~~~~~ 95 (238)
T d1ufoa_ 25 ALLLALHGLQGSKEHILALLPGYA---ERGFLLLAFDAPRHGEREGPPPSSKS---PR--YVEEVYRVA-LGFKEEARRV 95 (238)
T ss_dssp EEEEEECCTTCCHHHHHHTSTTTG---GGTEEEEECCCTTSTTSSCCCCCTTS---TT--HHHHHHHHH-HHHHHHHHHH
T ss_pred eEEEEeCCCCCCHHHHHHHHHHHH---HCCCEEEEecCCCCCCCccccccccc---ch--hhhhhhhhH-HhHHHHHHHH
Confidence 446666666676677777777777 89999999999998764221111000 00 000001111 1333333333
Q ss_pred HHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccc
Q 012210 235 IRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 235 l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
+.........+++++||||||.+++.+++. .+++++++.+.+...
T Consensus 96 ~~~~~~~~~~~v~~~G~S~Gg~~a~~~~~~------~p~~~~~~~~~~~~~ 140 (238)
T d1ufoa_ 96 AEEAERRFGLPLFLAGGSLGAFVAHLLLAE------GFRPRGVLAFIGSGF 140 (238)
T ss_dssp HHHHHHHHCCCEEEEEETHHHHHHHHHHHT------TCCCSCEEEESCCSS
T ss_pred hhhccccCCceEEEEEecccHHHHHHHHhc------Ccchhheeeeeeecc
Confidence 332222222489999999999999999988 456777777655433
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Probab=99.43 E-value=6.1e-13 Score=127.80 Aligned_cols=210 Identities=13% Similarity=0.089 Sum_probs=120.9
Q ss_pred HHHHHHhhhhcCceEeccCccccccCCcc-chHHHhhcccceEeec-----------CChhhHHhhhHHHHHHHHHhhcC
Q 012210 173 LSQNLVNMIEEGQLSVSPQLFDLQERLFS-TIDDFQKQLDLIVQYD-----------WDFDHYLEEDVPAAMEYIRAQSK 240 (468)
Q Consensus 173 ~a~~la~~l~~Gy~viapdl~~~~~~~~~-~~~~l~~~~~~~~~~D-----------~~~~~~~~~D~~a~i~~l~~~~~ 240 (468)
....++ .+||.|+++|+.+++..... ................ +..... ..|..++++++..+..
T Consensus 100 ~~~~~a---~~G~~v~~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~d~~~a~~~~~~~~~ 175 (322)
T d1vlqa_ 100 DWLFWP---SMGYICFVMDTRGQGSGWLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRV-FTDAVRAVEAAASFPQ 175 (322)
T ss_dssp GGCHHH---HTTCEEEEECCTTCCCSSSCCCCCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHH-HHHHHHHHHHHHTSTT
T ss_pred HHHHHH---hCCCEEEEeeccccCCCCCCccccccccccccccccchhhhchhhhhhhhhHHH-HHHHHHHHHHHHhcCC
Confidence 334566 89999999999998764221 0000000000000000 011122 3788899999988776
Q ss_pred CCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHh
Q 012210 241 PKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAA 320 (468)
Q Consensus 241 ~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (468)
.+..+++++|+|+||.+++..+.. .++++++|...+....... ....
T Consensus 176 ~d~~ri~~~G~S~GG~~a~~~~~~------~~~~~a~v~~~~~~~~~~~---------------------------~~~~ 222 (322)
T d1vlqa_ 176 VDQERIVIAGGSQGGGIALAVSAL------SKKAKALLCDVPFLCHFRR---------------------------AVQL 222 (322)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHH------CSSCCEEEEESCCSCCHHH---------------------------HHHH
T ss_pred cCchhccccccccchHHHHHHHhc------CCCccEEEEeCCccccHHH---------------------------HHhh
Confidence 655689999999999999988877 6789888876654321100 0000
Q ss_pred cCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEE
Q 012210 321 YPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAI 400 (468)
Q Consensus 321 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI 400 (468)
.... ............ .... ........ .++....+.+|++|+|++
T Consensus 223 ~~~~--------------------~~~~~~~~~~~~-~~~~-~~~~~~~~------------~~d~~~~a~~i~~P~Lv~ 268 (322)
T d1vlqa_ 223 VDTH--------------------PYAEITNFLKTH-RDKE-EIVFRTLS------------YFDGVNFAARAKIPALFS 268 (322)
T ss_dssp CCCT--------------------THHHHHHHHHHC-TTCH-HHHHHHHH------------TTCHHHHHTTCCSCEEEE
T ss_pred cccc--------------------chhhHHhhhhcC-cchh-hhHHHHhh------------hhhHHHHHhcCCCCEEEE
Confidence 0000 000000000000 0000 00000000 111234567899999999
Q ss_pred ecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 401 AGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 401 ~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
+|.+|.++|++.+.++++.++. .++++++ |+++|....+ .-.+..++||+++.
T Consensus 269 ~G~~D~~vp~~~~~~~~~~~~~-~~~l~~~--p~~~H~~~~~---------~~~~~~~~~l~~~l 321 (322)
T d1vlqa_ 269 VGLMDNICPPSTVFAAYNYYAG-PKEIRIY--PYNNHEGGGS---------FQAVEQVKFLKKLF 321 (322)
T ss_dssp EETTCSSSCHHHHHHHHHHCCS-SEEEEEE--TTCCTTTTHH---------HHHHHHHHHHHHHH
T ss_pred EeCCCCCcCHHHHHHHHHHCCC-CeEEEEE--CCCCCCCccc---------cCHHHHHHHHHHHh
Confidence 9999999999999999999985 5788888 8888854332 22344567887753
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=99.43 E-value=5.9e-13 Score=131.30 Aligned_cols=257 Identities=14% Similarity=0.082 Sum_probs=140.6
Q ss_pred cCceEeccCccccccC--CccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcE-EEEEEehhHHHHH
Q 012210 183 EGQLSVSPQLFDLQER--LFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKL-LAIGHSMGGILLY 259 (468)
Q Consensus 183 ~Gy~viapdl~~~~~~--~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v-~lvGhS~GG~ia~ 259 (468)
.-|-|||++++|.+.. .+....-....+ . .|..+|..+...|+..+...|.++++++ ++ .+||.||||++|+
T Consensus 76 ~kyfVI~~n~lG~~~gst~p~s~~p~~~~~-~--~yg~~FP~~ti~D~v~aq~~ll~~LGI~--~l~aViG~SmGGmqal 150 (376)
T d2vata1 76 SRYFIICLNYLGSPFGSAGPCSPDPDAEGQ-R--PYGAKFPRTTIRDDVRIHRQVLDRLGVR--QIAAVVGASMGGMHTL 150 (376)
T ss_dssp TTCEEEEECCTTCSSSSSSTTSBCTTTC---C--BCGGGCCCCCHHHHHHHHHHHHHHHTCC--CEEEEEEETHHHHHHH
T ss_pred cceEEEEeccCCCCcCCCCCCCCCcccccC-C--cccccCCcchhHHHHHHHHHHHHHhCcc--eEEEeecccHHHHHHH
Confidence 4599999999987532 111111000000 0 1122344445577777777777888886 87 5889999999999
Q ss_pred HHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcc---cCchhhhcC---CCCcchHhH-H-HHhcCC-CCCchhH
Q 012210 260 AMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLP---LADPAQALN---VPVVPLGAL-L-TAAYPL-SSSPPYV 330 (468)
Q Consensus 260 ~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~---~~~~~~~~~---~~~~~~~~~-~-~~~~~~-~~~~~~~ 330 (468)
.+|..| |+.|.++|.|++................ ..++...-+ ....|...+ . +.+..+ -..+
T Consensus 151 ~wa~~~-----Pd~v~~li~Ia~~~~~s~~~~a~~~~~~~ai~~Dp~w~~G~Y~~~~~p~~GL~~Ar~~~~~ty~S~--- 222 (376)
T d2vata1 151 EWAFFG-----PEYVRKIVPIATSCRQSGWCAAWFETQRQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSK--- 222 (376)
T ss_dssp HHGGGC-----TTTBCCEEEESCCSBCCHHHHHHHHHHHHHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCH---
T ss_pred HHHHhc-----hHHHhhhcccccccccchHHHHHHHHHHHHhhccccccCCCccccchhHHHHHHHHHHHHHHhcCH---
Confidence 999999 9999999999887765432221111110 011110000 001111111 0 000000 0000
Q ss_pred HHHHHHhhhccc-c---------------------------CCHHHHHHHH----hhccCCCcHHHHHHHHHHHhcCccc
Q 012210 331 FSWLNNLISAED-M---------------------------MHPELLKKLV----LNNFCTIPAKLILQLTTAFREGGLR 378 (468)
Q Consensus 331 ~~~l~~~~~~~~-~---------------------------~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (468)
.++...+.... . .....++.++ ...........+..+.+.+...++.
T Consensus 223 -~~~~~rf~~~~~~~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~vesyL~~~g~k~~~rfDansyl~l~~a~d~~Di~ 301 (376)
T d2vata1 223 -PAMDERFHMAPGVQAGRNISSQDAKKEINGTDSGNSHRAGQPIEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDIS 301 (376)
T ss_dssp -HHHHHHSCCCCCCC---------------------------CGGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTT
T ss_pred -HHHHHHHhhccccccccccccchhhhcccccccccccccccchhHHHHHHHHHHhhhhcccccccHHHHHHHHHhcccc
Confidence 00110000000 0 0000111111 1112233444555555555543332
Q ss_pred ccCCccccccccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHH
Q 012210 379 DRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIV 458 (468)
Q Consensus 379 ~~~~~~~~~~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~ 458 (468)
... .-++...+++|++|+|+|.++.|.+.|++..+++++.+|++ ++.++ + .-++|..|+. +++++.+.|.
T Consensus 302 ~~~-~g~l~~aL~~I~a~~LvI~~~sD~lFPp~~~~e~a~~l~~a--~~~~I--~--S~~GHDaFL~---e~~~~~~~I~ 371 (376)
T d2vata1 302 RGR-AGSIPEALAMITQPALIICARSDGLYSFDEHVEMGRSIPNS--RLCVV--D--TNEGHDFFVM---EADKVNDAVR 371 (376)
T ss_dssp TTT-CSSHHHHHTTCCSCEEEEECTTCSSSCHHHHHHHHHHSTTE--EEEEC--C--CSCGGGHHHH---THHHHHHHHH
T ss_pred ccc-CCCHHHHHhhCCCCEEEEEeCcccCcCHHHHHHHHHhcCCC--eEEEE--C--CCCCcccccc---CHHHHHHHHH
Confidence 110 11345568999999999999999999999999999999987 88887 3 2345654442 6799999999
Q ss_pred HHHhh
Q 012210 459 QFLGR 463 (468)
Q Consensus 459 ~FL~~ 463 (468)
+||++
T Consensus 372 ~FL~q 376 (376)
T d2vata1 372 GFLDQ 376 (376)
T ss_dssp HHHTC
T ss_pred HHHcC
Confidence 99975
|
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.40 E-value=5.6e-12 Score=115.99 Aligned_cols=191 Identities=17% Similarity=0.105 Sum_probs=115.9
Q ss_pred ccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecC----C---hhhHHhhhHHHHHHHH
Q 012210 163 SSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDW----D---FDHYLEEDVPAAMEYI 235 (468)
Q Consensus 163 ~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~----~---~~~~~~~D~~a~i~~l 235 (468)
.||....-+++.+.+..+...|+.+++|+...+........ .....+.....+. + ..+. .+.+..+++..
T Consensus 27 lHG~G~~~~~~~~~~~~l~~~~~~~v~p~Ap~~~~~~~~~~--~~~~w~~~~~~~~~~~~~~~~i~~~-~~~l~~li~~~ 103 (229)
T d1fj2a_ 27 LHGLGDTGHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNV--AMPSWFDIIGLSPDSQEDESGIKQA-AENIKALIDQE 103 (229)
T ss_dssp ECCSSSCHHHHHHHHHTTCCTTEEEEECCCCEEEEGGGTTE--EEECSSCBCCCSTTCCBCHHHHHHH-HHHHHHHHHHH
T ss_pred EcCCCCCHHHHHHHHHHhcCCCCEEEeCCCCCCccccCCCc--ccccccccccccccchhhhHHHHHH-HHHHHHHhhhh
Confidence 56666666677666665557899999988643311000000 0000000000000 1 1111 23444455544
Q ss_pred HhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHh
Q 012210 236 RAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGA 315 (468)
Q Consensus 236 ~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (468)
... +.+.++++++||||||.+++.++.++ ++++.++|.+++........
T Consensus 104 ~~~-~i~~~ri~l~GfS~Gg~~a~~~~~~~-----~~~~~gvi~~sg~lp~~~~~------------------------- 152 (229)
T d1fj2a_ 104 VKN-GIPSNRIILGGFSQGGALSLYTALTT-----QQKLAGVTALSCWLPLRASF------------------------- 152 (229)
T ss_dssp HHT-TCCGGGEEEEEETHHHHHHHHHHTTC-----SSCCSEEEEESCCCTTGGGS-------------------------
T ss_pred hhc-CCCccceeeeecccchHHHHHHHHhh-----ccccCccccccccccccccc-------------------------
Confidence 432 45556999999999999999999887 88999999887633211000
Q ss_pred HHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCc
Q 012210 316 LLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNI 395 (468)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~v 395 (468)
... .....+.++
T Consensus 153 ------------------------------------------~~~--------------------------~~~~~~~~~ 164 (229)
T d1fj2a_ 153 ------------------------------------------PQG--------------------------PIGGANRDI 164 (229)
T ss_dssp ------------------------------------------CSS--------------------------CCCSTTTTC
T ss_pred ------------------------------------------ccc--------------------------ccccccccC
Confidence 000 011122468
Q ss_pred cEEEEecCCCCcCCHHHHHHHHHhC----CCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccCC
Q 012210 396 PILAIAGDQDLICPPEAVEETVKLL----PEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDSV 467 (468)
Q Consensus 396 PvLiI~G~~D~ivp~~~~~~l~~~i----p~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~~ 467 (468)
|+|++||++|.++|.+.+++.++.+ .+.+++++.+ ++++|.... +..+.+.+||+++.++
T Consensus 165 Pvli~hG~~D~~vp~~~~~~~~~~L~~~~~~~~v~~~~~--~g~gH~i~~----------~~~~~~~~wL~~~Lp~ 228 (229)
T d1fj2a_ 165 SILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTY--EGMMHSSCQ----------QEMMDVKQFIDKLLPP 228 (229)
T ss_dssp CEEEEEETTCSSSCHHHHHHHHHHHHHHSCGGGEEEEEE--TTCCSSCCH----------HHHHHHHHHHHHHSCC
T ss_pred ceeEEEcCCCCeeCHHHHHHHHHHHHhcCCCCceEEEEe--CCCCCccCH----------HHHHHHHHHHHhHCcC
Confidence 9999999999999999887766654 3346688887 888886543 3457799999998754
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.40 E-value=1.1e-12 Score=124.97 Aligned_cols=217 Identities=14% Similarity=0.081 Sum_probs=126.5
Q ss_pred cccccccc--ccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHH
Q 012210 155 SSLLERRQ--SSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAM 232 (468)
Q Consensus 155 ~~ll~~~~--~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i 232 (468)
..|+--|. ..|-....+.+++.|+ .++.|++.|+.|++..-... ......++++++ +++.+
T Consensus 61 ~~l~c~~~~~~~g~~~~y~~la~~L~----~~~~V~al~~pG~~~~~~~~----------~~~~~~s~~~~a-~~~~~-- 123 (283)
T d2h7xa1 61 AVLVGCTGTAANGGPHEFLRLSTSFQ----EERDFLAVPLPGYGTGTGTG----------TALLPADLDTAL-DAQAR-- 123 (283)
T ss_dssp CEEEEECCCCTTCSTTTTHHHHHTTT----TTCCEEEECCTTCCBC---C----------BCCEESSHHHHH-HHHHH--
T ss_pred ceEEEeCCCCCCCCHHHHHHHHHhcC----CCceEEEEeCCCCCCCCCCc----------cccccCCHHHHH-HHHHH--
Confidence 34555443 2345556677877776 68999999999986521100 000112455554 44433
Q ss_pred HHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcc
Q 012210 233 EYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVP 312 (468)
Q Consensus 233 ~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (468)
.+....+. ++++|+||||||.|++.+|.+++.. ...+|.++|++++......... ...
T Consensus 124 -~i~~~~~~--~P~vL~GhS~GG~vA~e~A~~l~~~-~g~~v~~LvL~d~~~~~~~~~~--~~~---------------- 181 (283)
T d2h7xa1 124 -AILRAAGD--APVVLLGHSGGALLAHELAFRLERA-HGAPPAGIVLVDPYPPGHQEPI--EVW---------------- 181 (283)
T ss_dssp -HHHHHHTT--SCEEEEEETHHHHHHHHHHHHHHHH-HSCCCSEEEEESCCCTTCCHHH--HHT----------------
T ss_pred -HHHHhcCC--CceEEEEeccchHHHHHHHHhhHHH-cCCCceEEEEecCCccccccch--hhh----------------
Confidence 34333333 3899999999999999999875100 0346899999987554332110 000
Q ss_pred hHhHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHH---HHHHHHHhcCcccccCCccccccc
Q 012210 313 LGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLI---LQLTTAFREGGLRDRGGKFFYKDH 389 (468)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 389 (468)
...+.. ..............+ ..+.+.+. ...
T Consensus 182 ------------------~~~~~~--------------~~~~~~~~~~~~~~l~a~~~~~~~~~-------------~~~ 216 (283)
T d2h7xa1 182 ------------------SRQLGE--------------GLFAGELEPMSDARLLAMGRYARFLA-------------GPR 216 (283)
T ss_dssp ------------------HHHHHH--------------HHHHTCSSCCCHHHHHHHHHHHHHHH-------------SCC
T ss_pred ------------------hhhhHH--------------HhhcccccccccHHHHHHHHHHHHHh-------------hcc
Confidence 000000 000000111111111 11112211 123
Q ss_pred cCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 390 IHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 390 l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
...+++|+|+|+|++|..++++....+.+.+++ ..+++.+ + ++|+.+++ +.++.+.+.|.+||++.
T Consensus 217 ~~~~~~Pvl~i~g~~d~~~~~~~~~~w~~~~~~-~~~~~~v--~-G~H~~ml~-----e~~~~vA~~i~~~L~~l 282 (283)
T d2h7xa1 217 PGRSSAPVLLVRASEPLGDWQEERGDWRAHWDL-PHTVADV--P-GDHFTMMR-----DHAPAVAEAVLSWLDAI 282 (283)
T ss_dssp CCCCCSCEEEEEESSCSSCCCGGGCCCSCCCSS-CSEEEEE--S-SCTTHHHH-----TTHHHHHHHHHHHHHHH
T ss_pred ccccCCCeEEEEeCCCCCCCHHHHHHHHHhCCC-CcEEEEE--c-CCCccccc-----CCHHHHHHHHHHHHHhc
Confidence 567899999999999999998887777777775 3467776 5 47875543 36899999999999864
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=99.39 E-value=3.5e-12 Score=125.02 Aligned_cols=255 Identities=15% Similarity=0.136 Sum_probs=142.1
Q ss_pred cCceEeccCccccccCCc--cchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEE-EEEEehhHHHHH
Q 012210 183 EGQLSVSPQLFDLQERLF--STIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLL-AIGHSMGGILLY 259 (468)
Q Consensus 183 ~Gy~viapdl~~~~~~~~--~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~-lvGhS~GG~ia~ 259 (468)
.-|-||+++++|.+..-. .... ......|..+|..+...|+.++...|.++++++ ++. ++|.||||++|+
T Consensus 84 ~~yfVI~~n~lG~~~~ss~~~s~~-----p~~~~~yg~~fP~~t~~D~v~~~~~ll~~LGI~--~l~~viG~SmGGmqAl 156 (362)
T d2pl5a1 84 NQYFIICSNVIGGCKGSSGPLSIH-----PETSTPYGSRFPFVSIQDMVKAQKLLVESLGIE--KLFCVAGGSMGGMQAL 156 (362)
T ss_dssp TTCEEEEECCTTCSSSSSSTTSBC-----TTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCS--SEEEEEEETHHHHHHH
T ss_pred cccEEEeeccccCcccccCccccc-----cccccccCcCCccchhHHHHHHHHHHHHHhCcC--eeEEEeehhHHHHHHH
Confidence 449999999999754311 1111 000011122344444578888888888888887 876 789999999999
Q ss_pred HHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcc---cCchhhhcC-C-CCcchHhH-HHHhcCCC--CCchhHH
Q 012210 260 AMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLP---LADPAQALN-V-PVVPLGAL-LTAAYPLS--SSPPYVF 331 (468)
Q Consensus 260 ~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~---~~~~~~~~~-~-~~~~~~~~-~~~~~~~~--~~~~~~~ 331 (468)
.+|..| |+.|+++|.+++................ ..++...-+ . ...|...+ .++.+.+. ..+
T Consensus 157 ~wA~~y-----Pd~v~~~v~ia~sa~~s~~~~~~~~~~~~aI~~Dp~~~~G~Y~~~~P~~GL~~AR~~~~~~y~s~---- 227 (362)
T d2pl5a1 157 EWSIAY-----PNSLSNCIVMASTAEHSAMQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSD---- 227 (362)
T ss_dssp HHHHHS-----TTSEEEEEEESCCSBCCHHHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCH----
T ss_pred HHHHhC-----chHhhhhcccccccccCHHHHHHHHHHHHHHhcCCccccCCcccCChhHHHHHHHHHHHHHHcCc----
Confidence 999999 9999999999987665432221111110 011111110 0 00111111 11111000 000
Q ss_pred HHHHHhhhccc----cC-CHHHHHHHHh----hccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEec
Q 012210 332 SWLNNLISAED----MM-HPELLKKLVL----NNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAG 402 (468)
Q Consensus 332 ~~l~~~~~~~~----~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G 402 (468)
.++...+.... .. ....++.++. ..........+..+.+.+....+.. ..++...+++|++|+|+|..
T Consensus 228 ~~~~~~f~~~~~~~~~~~~~~~ve~yl~~~g~k~~~rfDan~yl~l~~a~~~~Di~~---~~~l~~aL~~I~AkvLvi~~ 304 (362)
T d2pl5a1 228 DKMREKFGRNPPRGNILSTDFAVGSYLIYQGESFVDRFDANSYIYVTKALDHYSLGK---GKELTAALSNATCRFLVVSY 304 (362)
T ss_dssp HHHHHHHTTSCCSSCTTTTTTTSCGGGGSTTCCSSSCCCHHHHHHHHHHHHHCBCCS---HHHHHHHHTTCCSEEEEEEE
T ss_pred hhhhhhhccccccccccchhHHHHHHHHHHHHHHHhcCCHHHHHHHHhhhhcccccc---cccHHHHHhhCCCCEEEEEe
Confidence 11111111100 00 0000111111 1122344555555666555433321 22455679999999999999
Q ss_pred CCCCcCCHHHHHHHHHhCCCCc--eeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 403 DQDLICPPEAVEETVKLLPEDL--VTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 403 ~~D~ivp~~~~~~l~~~ip~~~--~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
+.|.++|++..+++++.+|++. ++++.+. -..||..++. +.+++.+.|.+||+.
T Consensus 305 ~sD~lFpp~~~~~~a~~l~~a~~~v~~~eI~-S~~GHdaFL~------e~~~~~~~I~~FL~~ 360 (362)
T d2pl5a1 305 SSDWLYPPAQSREIVKSLEAADKRVFYVELQ-SGEGHDSFLL------KNPKQIEILKGFLEN 360 (362)
T ss_dssp TTCCSSCHHHHHHHHHHHHHTTCCEEEEEEC-CCBSSGGGGS------CCHHHHHHHHHHHHC
T ss_pred CcccCcCHHHHHHHHHHHHhCCCCeEEEEeC-CCCCcchhcc------CHHHHHHHHHHHHcC
Confidence 9999999999999999998763 4566661 1125554443 678899999999973
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Probab=99.39 E-value=1.2e-12 Score=118.85 Aligned_cols=68 Identities=12% Similarity=0.029 Sum_probs=50.5
Q ss_pred cccCccCccEEEEecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 388 DHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 388 ~~l~~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
....++++|+++|+|++|..++... ..+.+..+. ..+++.+ + ++|+.+++ .+..+++.+.|.+||+++
T Consensus 162 ~~~~~i~~p~l~i~g~~D~~~~~~~-~~w~~~~~~-~~~~~~i--~-g~H~~ml~----~~~~~~va~~I~~~L~~~ 229 (230)
T d1jmkc_ 162 ISTGQVKADIDLLTSGADFDIPEWL-ASWEEATTG-AYRMKRG--F-GTHAEMLQ----GETLDRNAGILLEFLNTQ 229 (230)
T ss_dssp CCCSCBSSEEEEEECSSCCCCCTTE-ECSGGGBSS-CEEEEEC--S-SCGGGTTS----HHHHHHHHHHHHHHHTCB
T ss_pred cccccccCcceeeeecCCcccchhH-HHHHHhccC-CcEEEEE--c-CCChhhcC----CccHHHHHHHHHHHHhhc
Confidence 3567899999999999999998653 344555554 4577776 4 68988876 113388999999999875
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=99.39 E-value=6.3e-12 Score=111.16 Aligned_cols=170 Identities=16% Similarity=0.094 Sum_probs=116.7
Q ss_pred ccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcC
Q 012210 161 RQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSK 240 (468)
Q Consensus 161 ~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~ 240 (468)
|.+.|-...++.+++.|+ .+||.++.++.+++..... ...... +++...++.+..+.+
T Consensus 9 HG~~~~~~~~~~l~~~l~---~~g~~~~~~~~~~~~~~~~------------------~~~~~~-~~l~~~i~~~~~~~~ 66 (179)
T d1ispa_ 9 HGIGGASFNFAGIKSYLV---SQGWSRDKLYAVDFWDKTG------------------TNYNNG-PVLSRFVQKVLDETG 66 (179)
T ss_dssp CCTTCCGGGGHHHHHHHH---HTTCCGGGEEECCCSCTTC------------------CHHHHH-HHHHHHHHHHHHHHC
T ss_pred CCCCCCHHHHHHHHHHHH---HcCCeEEEEecCCcccccc------------------ccchhh-hhHHHHHHHHHHhcC
Confidence 555565667788888888 9999999888777643111 111222 566667777766666
Q ss_pred CCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHh
Q 012210 241 PKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAA 320 (468)
Q Consensus 241 ~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (468)
.+ ++++|||||||.++..++.+++ .+++|+++|+++++.......
T Consensus 67 ~~--~v~lvGHSmGG~va~~~~~~~~---~~~~V~~~V~l~~p~~g~~~~------------------------------ 111 (179)
T d1ispa_ 67 AK--KVDIVAHSMGGANTLYYIKNLD---GGNKVANVVTLGGANRLTTGK------------------------------ 111 (179)
T ss_dssp CS--CEEEEEETHHHHHHHHHHHHSS---GGGTEEEEEEESCCGGGTCSB------------------------------
T ss_pred Cc--eEEEEeecCcCHHHHHHHHHcC---CchhhCEEEEECCCCCCchhh------------------------------
Confidence 55 9999999999999999998752 257899999998864311100
Q ss_pred cCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEE
Q 012210 321 YPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAI 400 (468)
Q Consensus 321 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI 400 (468)
.. ........+|++.|
T Consensus 112 --------------------------------------~l--------------------------~~~~~~~~~~~~~i 127 (179)
T d1ispa_ 112 --------------------------------------AL--------------------------PGTDPNQKILYTSI 127 (179)
T ss_dssp --------------------------------------CC--------------------------CCSCTTCCCEEEEE
T ss_pred --------------------------------------hc--------------------------CCcccccCceEEEE
Confidence 00 00112246899999
Q ss_pred ecCCCCcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccCC
Q 012210 401 AGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDSV 467 (468)
Q Consensus 401 ~G~~D~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~~ 467 (468)
+|..|.++++..+ .++++ +.+.+ ++.+|..... . .++++.|.+||+.-.+.
T Consensus 128 ~~~~D~~v~~~~~-----~l~~~--~~~~~--~~~~H~~l~~------~-~~v~~~i~~~L~~~~~~ 178 (179)
T d1ispa_ 128 YSSADMIVMNYLS-----RLDGA--RNVQI--HGVGHIGLLY------S-SQVNSLIKEGLNGGGQN 178 (179)
T ss_dssp EETTCSSSCHHHH-----CCBTS--EEEEE--SSCCTGGGGG------C-HHHHHHHHHHHTTTCBC
T ss_pred EecCCcccCchhh-----cCCCc--eEEEE--CCCCchhhcc------C-HHHHHHHHHHHhccCCC
Confidence 9999999998753 46766 55555 6777765542 3 47899999999865443
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=99.38 E-value=5.3e-12 Score=123.52 Aligned_cols=259 Identities=15% Similarity=0.119 Sum_probs=142.8
Q ss_pred cCceEeccCccccccCCc-cchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcE-EEEEEehhHHHHHH
Q 012210 183 EGQLSVSPQLFDLQERLF-STIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKL-LAIGHSMGGILLYA 260 (468)
Q Consensus 183 ~Gy~viapdl~~~~~~~~-~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v-~lvGhS~GG~ia~~ 260 (468)
.-|.||+++++|.+..-. ....... .+. .+..+|..+...|+..+...|.++++++ ++ .+||.||||++|+.
T Consensus 77 ~kyfVI~~n~lG~~~gSs~p~s~~p~-tg~---~~g~~FP~iti~D~v~aq~~Ll~~LGI~--~l~~viG~SmGGmqAl~ 150 (357)
T d2b61a1 77 DRYFFISSNVLGGCKGTTGPSSINPQ-TGK---PYGSQFPNIVVQDIVKVQKALLEHLGIS--HLKAIIGGSFGGMQANQ 150 (357)
T ss_dssp TTCEEEEECCTTCSSSSSCTTSBCTT-TSS---BCGGGCCCCCHHHHHHHHHHHHHHTTCC--CEEEEEEETHHHHHHHH
T ss_pred CceEEEEecccCCccccCCcCCCCCC-CCC---CCCcccccchhHHHHHHHHHHHHHhCcc--eEEEEecccHHHHHHHH
Confidence 459999999999754211 1000000 000 1222344555578888888888888887 88 57799999999999
Q ss_pred HHHhcCCCCCcccccceeEEccccccCCchhhHHhhcc---cCchhhhcCC---CCcch-HhHHHHhcCCCCCchhHHHH
Q 012210 261 MLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLP---LADPAQALNV---PVVPL-GALLTAAYPLSSSPPYVFSW 333 (468)
Q Consensus 261 ~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~---~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~ 333 (468)
+|..| |+.|+++|.+++..........+..... ..++...-+. ...|. +...++...+.... ...+
T Consensus 151 wa~~~-----Pd~v~~~i~i~~~a~~s~~~~~~~~~~~~aI~~Dp~~~~G~Y~~~~~p~~GL~~Ar~~a~~ty~--s~~~ 223 (357)
T d2b61a1 151 WAIDY-----PDFMDNIVNLCSSIYFSAEAIGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYR--TDLQ 223 (357)
T ss_dssp HHHHS-----TTSEEEEEEESCCSSCCHHHHHHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHS--CHHH
T ss_pred HHHhh-----hHHHhhhcccccccccchhHHHHHHHHHHHHHcCCCCCCCCcccCCCchhHHHHHHHHHHhhcc--CHHH
Confidence 99999 9999999999887654432221111110 0111111110 00111 11111110000000 0011
Q ss_pred HHHhhhcccc------CCHHHHHHHH----hhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecC
Q 012210 334 LNNLISAEDM------MHPELLKKLV----LNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGD 403 (468)
Q Consensus 334 l~~~~~~~~~------~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~ 403 (468)
+...+..... .....++.++ .+...+.....+..+.+.+....+.. +.-++...+++|++|+|+|..+
T Consensus 224 ~~~~f~r~~~~~~~~~~~~~~vesyL~~~g~kf~~rfDan~yl~l~~a~~~~D~~~--~~~~l~~aL~~I~a~vLvi~~~ 301 (357)
T d2b61a1 224 LAKAFGRATKSDGSFWGDYFQVESYLSYQGKKFLERFDANSYLHLLRALDMYDPSL--GYENVKEALSRIKARYTLVSVT 301 (357)
T ss_dssp HHHHTTTCBCTTCCTTSCCBHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHCCTTT--TSSCHHHHHTTCCSEEEEEEET
T ss_pred HHHHhccccccccccccchhhHHHHHHHHHHHHHhhCCHHHHHHHHHHhhhccccc--ccccHHHHHhhcCCCEEEEEeC
Confidence 1111111000 0000111111 11223344555555555554333221 2234566799999999999999
Q ss_pred CCCcCCHHHHHHHHHhCCCC--ceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 404 QDLICPPEAVEETVKLLPED--LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 404 ~D~ivp~~~~~~l~~~ip~~--~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
.|.+.||+..+++++.+++. .++++++ + +-++|..++. +.+++.+.|.+||+.
T Consensus 302 sD~lFpp~~~~~~a~~l~~~~~~v~~~~I--~--S~~GHdafL~---e~~~~~~~I~~fL~~ 356 (357)
T d2b61a1 302 TDQLFKPIDLYKSKQLLEQSGVDLHFYEF--P--SDYGHDAFLV---DYDQFEKRIRDGLAG 356 (357)
T ss_dssp TCSSSCHHHHHHHHHHHHHTTCEEEEEEE--C--CTTGGGHHHH---CHHHHHHHHHHHHHT
T ss_pred CccccCHHHHHHHHHHHHhcCCCeEEEEE--C--CCCCccccCc---CHHHHHHHHHHHHcc
Confidence 99999999999999988754 3467777 3 3456655442 678999999999975
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Probab=99.36 E-value=3.9e-12 Score=114.08 Aligned_cols=183 Identities=16% Similarity=0.130 Sum_probs=119.6
Q ss_pred cccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecC-ChhhHHhhhHHHHHHH
Q 012210 156 SLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDW-DFDHYLEEDVPAAMEY 234 (468)
Q Consensus 156 ~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~-~~~~~~~~D~~a~i~~ 234 (468)
.++..|+..|-...+..+++.++ .++.|++|+.......+....... .... .+. +.... .+++..+++.
T Consensus 16 ~vi~lHG~g~~~~~~~~~~~~l~----~~~~vv~p~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~-~~~~~~~i~~ 85 (202)
T d2h1ia1 16 VLLLLHGTGGNELDLLPLAEIVD----SEASVLSVRGNVLENGMPRFFRRL---AEGI--FDEEDLIFR-TKELNEFLDE 85 (202)
T ss_dssp EEEEECCTTCCTTTTHHHHHHHH----TTSCEEEECCSEEETTEEESSCEE---ETTE--ECHHHHHHH-HHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHhc----cCCceeeecccccCCCCccccccC---CCCC--CchHHHHHH-HHHHHHHHHH
Confidence 34554444445555666776665 689999987654433211111100 0000 011 11222 3678888888
Q ss_pred HHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchH
Q 012210 235 IRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLG 314 (468)
Q Consensus 235 l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (468)
+......+..+++++|+|+||.+++.++..+ +..+.+++.+++..+...
T Consensus 86 ~~~~~~~d~~~i~~~G~S~Gg~~a~~la~~~-----~~~~~~~~~~~~~~~~~~-------------------------- 134 (202)
T d2h1ia1 86 AAKEYKFDRNNIVAIGYSNGANIAASLLFHY-----ENALKGAVLHHPMVPRRG-------------------------- 134 (202)
T ss_dssp HHHHTTCCTTCEEEEEETHHHHHHHHHHHHC-----TTSCSEEEEESCCCSCSS--------------------------
T ss_pred HHHhccccccceeeecccccchHHHHHHHhc-----cccccceeeecCCCCccc--------------------------
Confidence 8888777777999999999999999999987 788888888766332100
Q ss_pred hHHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccC
Q 012210 315 ALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCN 394 (468)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~ 394 (468)
........
T Consensus 135 ------------------------------------------------------------------------~~~~~~~~ 142 (202)
T d2h1ia1 135 ------------------------------------------------------------------------MQLANLAG 142 (202)
T ss_dssp ------------------------------------------------------------------------CCCCCCTT
T ss_pred ------------------------------------------------------------------------cccccccc
Confidence 01123456
Q ss_pred ccEEEEecCCCCcCCHHHHHHHHHhCCCC--ceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 395 IPILAIAGDQDLICPPEAVEETVKLLPED--LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 395 vPvLiI~G~~D~ivp~~~~~~l~~~ip~~--~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
+|+++++|++|.+||++.++++.+.+... +++++.+ |+ +|... .+..+.+.+||++.
T Consensus 143 ~~~~i~~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~--~g-gH~~~----------~~~~~~~~~wl~k~ 201 (202)
T d2h1ia1 143 KSVFIAAGTNDPICSSAESEELKVLLENANANVTMHWE--NR-GHQLT----------MGEVEKAKEWYDKA 201 (202)
T ss_dssp CEEEEEEESSCSSSCHHHHHHHHHHHHTTTCEEEEEEE--SS-TTSCC----------HHHHHHHHHHHHHH
T ss_pred chhhcccccCCCccCHHHHHHHHHHHHHCCCCEEEEEE--CC-CCcCC----------HHHHHHHHHHHHHh
Confidence 89999999999999999999998887765 3455665 54 66432 34567899999864
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.35 E-value=4.7e-12 Score=118.04 Aligned_cols=198 Identities=12% Similarity=0.055 Sum_probs=119.9
Q ss_pred HHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEe
Q 012210 173 LSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHS 252 (468)
Q Consensus 173 ~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS 252 (468)
....++ .+||.|+++|..+.+... ..+..... .++...+ ..|..++++++..+...+.+++.++|+|
T Consensus 56 ~~~~~a---~~g~~V~~~d~rg~~~~~----~~~~~~~~----~~~~~~~--~~~~~~~~~~~~~~~~id~~~i~i~G~S 122 (258)
T d2bgra2 56 ATYLAS---TENIIVASFDGRGSGYQG----DKIMHAIN----RRLGTFE--VEDQIEAARQFSKMGFVDNKRIAIWGWS 122 (258)
T ss_dssp HHHHHH---TTCCEEEEECCTTCSSSC----HHHHGGGT----TCTTSHH--HHHHHHHHHHHTTSSSEEEEEEEEEEET
T ss_pred HHHHHh---cCCcEEEeecccccCCcc----hHHHHhhh----hhhhhHH--HHHHHHHHHHhhhhcccccccccccCcc
Confidence 344566 899999999998764311 11111111 1122223 3778889999988776665689999999
Q ss_pred hhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCchhHHH
Q 012210 253 MGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFS 332 (468)
Q Consensus 253 ~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (468)
+||.+++.++..+ ++.+...+...+........ . .
T Consensus 123 ~GG~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-----------------------~-----------------~ 157 (258)
T d2bgra2 123 YGGYVTSMVLGSG-----SGVFKCGIAVAPVSRWEYYD-----------------------S-----------------V 157 (258)
T ss_dssp HHHHHHHHHHTTT-----CSCCSEEEEESCCCCGGGSB-----------------------H-----------------H
T ss_pred hhhcccccccccC-----CCcceEEEEeeccccccccc-----------------------c-----------------c
Confidence 9999999999875 55555555444322211100 0 0
Q ss_pred HHHHhhhccc-cCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCcc-CccEEEEecCCCCcCCH
Q 012210 333 WLNNLISAED-MMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKC-NIPILAIAGDQDLICPP 410 (468)
Q Consensus 333 ~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I-~vPvLiI~G~~D~ivp~ 410 (468)
.......... ....+... . ......+.++ ++|+|++||+.|.++|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~--------------------~------------~~~~~~~~~~~~~P~li~hG~~D~~Vp~ 205 (258)
T d2bgra2 158 YTERYMGLPTPEDNLDHYR--------------------N------------STVMSRAENFKQVEYLLIHGTADDNVHF 205 (258)
T ss_dssp HHHHHHCCCSTTTTHHHHH--------------------H------------SCSGGGGGGGGGSEEEEEEETTCSSSCT
T ss_pred ccchhcccccchhhHHHhh--------------------c------------ccccccccccccCChheeeecCCCcccH
Confidence 0000000000 00111000 0 0011233444 38999999999999999
Q ss_pred HHHHHHHHhCCC--CceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccCC
Q 012210 411 EAVEETVKLLPE--DLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDSV 467 (468)
Q Consensus 411 ~~~~~l~~~ip~--~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~~ 467 (468)
..++++++.+.. ..++++++ |+++|..... +....+.+.|.+||+++...
T Consensus 206 ~~s~~~~~~l~~~g~~~~~~~~--~g~~H~~~~~-----~~~~~~~~~i~~fl~~~l~~ 257 (258)
T d2bgra2 206 QQSAQISKALVDVGVDFQAMWY--TDEDHGIASS-----TAHQHIYTHMSHFIKQCFSL 257 (258)
T ss_dssp HHHHHHHHHHHHHTCCCEEEEE--TTCCTTCCSH-----HHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHCCCCEEEEEE--CCCCCCCCCC-----ccHHHHHHHHHHHHHHHhcC
Confidence 999888877643 24578887 8899965443 36678899999999998653
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.33 E-value=2.2e-12 Score=120.46 Aligned_cols=199 Identities=13% Similarity=0.154 Sum_probs=116.8
Q ss_pred HHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEeh
Q 012210 174 SQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSM 253 (468)
Q Consensus 174 a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~ 253 (468)
.+.|| .+||.|+++|..|..+. -..+..... .++...+ ..|+.++++++.++...+.++|+++|||+
T Consensus 56 ~~~la---~~G~~vv~~d~rGs~~~----g~~~~~~~~----~~~g~~~--~~d~~~~i~~l~~~~~id~~ri~v~G~S~ 122 (258)
T d1xfda2 56 TVMVS---SHGAVVVKCDGRGSGFQ----GTKLLHEVR----RRLGLLE--EKDQMEAVRTMLKEQYIDRTRVAVFGKDY 122 (258)
T ss_dssp HHHHH---TTCCEEECCCCTTCSSS----HHHHHHTTT----TCTTTHH--HHHHHHHHHHHHSSSSEEEEEEEEEEETH
T ss_pred HHHHh---cCCcEEEEecccccccc----chhHhhhhh----ccchhHH--HHHHHHhhhhhcccccccccceeccccCc
Confidence 45677 89999999998764321 111211111 1222333 38999999999998776666899999999
Q ss_pred hHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCchhHHHH
Q 012210 254 GGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPYVFSW 333 (468)
Q Consensus 254 GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (468)
||.+++.++...+ ...+..+...+.+.+........ ..... .+
T Consensus 123 GG~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~-------------~~ 165 (258)
T d1xfda2 123 GGYLSTYILPAKG-ENQGQTFTCGSALSPITDFKLYA-----------------------SAFSE-------------RY 165 (258)
T ss_dssp HHHHHHHCCCCSS-STTCCCCSEEEEESCCCCTTSSB-----------------------HHHHH-------------HH
T ss_pred hHHHHHHHHhcCC-cccceeeeeeeccccceeeeccc-----------------------ccccc-------------cc
Confidence 9999998876641 11122344444444322211100 00000 00
Q ss_pred HHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCc-cCccEEEEecCCCCcCCHHH
Q 012210 334 LNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHK-CNIPILAIAGDQDLICPPEA 412 (468)
Q Consensus 334 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-I~vPvLiI~G~~D~ivp~~~ 412 (468)
..... .+++. . ........+.+ .++|+|+++|+.|..+|++.
T Consensus 166 ----~~~~~-~~~~~--------~------------------------~~~s~~~~~~~~~~~p~Li~hG~~D~~vp~~~ 208 (258)
T d1xfda2 166 ----LGLHG-LDNRA--------Y------------------------EMTKVAHRVSALEEQQFLIIHPTADEKIHFQH 208 (258)
T ss_dssp ----HCCCS-SCCSS--------T------------------------TTTCTHHHHTSCCSCEEEEEEETTCSSSCHHH
T ss_pred ----ccccc-cchHH--------h------------------------hccchhhhhhhhhcccccccccCCCCCcCHHH
Confidence 00000 00000 0 00001112223 36899999999999999999
Q ss_pred HHHHHHhCCCC--ceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccC
Q 012210 413 VEETVKLLPED--LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 466 (468)
Q Consensus 413 ~~~l~~~ip~~--~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~ 466 (468)
+.++.+.+... ..+++++ |+++|..... +....+++.+.+||+++.+
T Consensus 209 s~~~~~~l~~~~~~~~~~~~--p~~~H~~~~~-----~~~~~~~~~~~~f~~~~~~ 257 (258)
T d1xfda2 209 TAELITQLIRGKANYSLQIY--PDESHYFTSS-----SLKQHLYRSIINFFVECFR 257 (258)
T ss_dssp HHHHHHHHHHTTCCCEEEEE--TTCCSSCCCH-----HHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHCCCCEEEEEE--CCCCCCCCCC-----cCHHHHHHHHHHHHHHhhC
Confidence 88887765433 4467777 8999965432 3567788999999998753
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.28 E-value=8.5e-11 Score=107.16 Aligned_cols=165 Identities=18% Similarity=0.269 Sum_probs=123.9
Q ss_pred hhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEE
Q 012210 170 IRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAI 249 (468)
Q Consensus 170 i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lv 249 (468)
...+++.++ ..||.++.+|+.|.+.. .| .+|+...+ .+|..++++++..+.... .++.++
T Consensus 45 ~~~~a~~l~---~~G~~~lrfn~RG~g~S----------~G----~~~~~~~e--~~d~~aa~~~~~~~~~~~-~~~~~~ 104 (218)
T d2i3da1 45 VYQLFYLFQ---KRGFTTLRFNFRSIGRS----------QG----EFDHGAGE--LSDAASALDWVQSLHPDS-KSCWVA 104 (218)
T ss_dssp HHHHHHHHH---HTTCEEEEECCTTSTTC----------CS----CCCSSHHH--HHHHHHHHHHHHHHCTTC-CCEEEE
T ss_pred HHHHHHHHH---hcCeeEEEEecCccCCC----------cc----ccccchhH--HHHHHHHHhhhhcccccc-cceeEE
Confidence 566888888 99999999999887652 11 23333333 389999999998876542 479999
Q ss_pred EEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCCCchh
Q 012210 250 GHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSSSPPY 329 (468)
Q Consensus 250 GhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (468)
|+|+||.++..++.+ ...+.+++++.++.....
T Consensus 105 g~S~G~~~a~~~a~~------~~~~~~~~~~~~~~~~~~----------------------------------------- 137 (218)
T d2i3da1 105 GYSFGAWIGMQLLMR------RPEIEGFMSIAPQPNTYD----------------------------------------- 137 (218)
T ss_dssp EETHHHHHHHHHHHH------CTTEEEEEEESCCTTTSC-----------------------------------------
T ss_pred eeehHHHHHHHHHHh------hccccceeeccccccccc-----------------------------------------
Confidence 999999999999987 456677777765432100
Q ss_pred HHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecCCCCcCC
Q 012210 330 VFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICP 409 (468)
Q Consensus 330 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~D~ivp 409 (468)
...+..+.+|+|+++|+.|.+++
T Consensus 138 ---------------------------------------------------------~~~~~~~~~p~l~i~g~~D~~~~ 160 (218)
T d2i3da1 138 ---------------------------------------------------------FSFLAPCPSSGLIINGDADKVAP 160 (218)
T ss_dssp ---------------------------------------------------------CTTCTTCCSCEEEEEETTCSSSC
T ss_pred ---------------------------------------------------------hhhccccCCCceeeecccceecC
Confidence 02234567899999999999999
Q ss_pred HHHHHHHHHhCCC---CceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhccCC
Q 012210 410 PEAVEETVKLLPE---DLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDSV 467 (468)
Q Consensus 410 ~~~~~~l~~~ip~---~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~~~ 467 (468)
...+..+.+.+.. ...+++++ |+++|+.|- ..+++.+.|.+||+++...
T Consensus 161 ~~~~~~l~~~~~~~~~~~~~~~vi--~gAdHfF~g-------~~~~l~~~v~~~l~~~l~~ 212 (218)
T d2i3da1 161 EKDVNGLVEKLKTQKGILITHRTL--PGANHFFNG-------KVDELMGECEDYLDRRLNG 212 (218)
T ss_dssp HHHHHHHHHHHTTSTTCCEEEEEE--TTCCTTCTT-------CHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHhhccCCCccEEEe--CCCCCCCcC-------CHHHHHHHHHHHHHHhcCC
Confidence 9999888877653 24577788 999998773 5589999999999988643
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.27 E-value=2.6e-12 Score=118.69 Aligned_cols=90 Identities=14% Similarity=0.084 Sum_probs=55.4
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIR 236 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~ 236 (468)
|+-.|++.|....++.++..| ++.|+++|+.|++.. .+.++++ .|+.+.+ +
T Consensus 28 l~l~Hg~~gs~~~~~~l~~~L------~~~v~~~d~~g~~~~-------------------~~~~~~a-~~~~~~~---~ 78 (286)
T d1xkta_ 28 LFLVHPIEGSTTVFHSLASRL------SIPTYGLQCTRAAPL-------------------DSIHSLA-AYYIDCI---R 78 (286)
T ss_dssp EEEECCTTCCCGGGHHHHHTC------SSCEEEECCCTTSCC-------------------SCHHHHH-HHHHHHH---H
T ss_pred EEEECCCCccHHHHHHHHHHc------CCeEEEEeCCCCCCC-------------------CCHHHHH-HHHHHHH---H
Confidence 444455555556666555433 688999999887441 0234444 4444433 3
Q ss_pred hhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcc
Q 012210 237 AQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLAS 282 (468)
Q Consensus 237 ~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap 282 (468)
...+. ++++++||||||.+++.+|.++ |+++.+++++..
T Consensus 79 ~~~~~--~~~~lvGhS~Gg~vA~~~A~~~-----p~~~~~v~~l~~ 117 (286)
T d1xkta_ 79 QVQPE--GPYRVAGYSYGACVAFEMCSQL-----QAQQSPAPTHNS 117 (286)
T ss_dssp HHCCS--SCCEEEEETHHHHHHHHHHHHH-----HHC------CCE
T ss_pred HhcCC--CceEEeecCCccHHHHHHHHHH-----HHcCCCceeEEE
Confidence 33333 3999999999999999999998 888888876654
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.22 E-value=4.9e-11 Score=106.90 Aligned_cols=180 Identities=17% Similarity=0.185 Sum_probs=112.3
Q ss_pred ccccccccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecC-ChhhHHhhhHHHHHHHH
Q 012210 157 LLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDW-DFDHYLEEDVPAAMEYI 235 (468)
Q Consensus 157 ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~-~~~~~~~~D~~a~i~~l 235 (468)
++-.|+..|-...+..+++.++ .++.+++|+.......+....... .... .+. +.... ..++...++..
T Consensus 20 vi~lHG~G~~~~~~~~~~~~l~----~~~~v~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~-~~~~~~~l~~~ 89 (203)
T d2r8ba1 20 FVLLHGTGGDENQFFDFGARLL----PQATILSPVGDVSEHGAARFFRRT---GEGV--YDMVDLERA-TGKMADFIKAN 89 (203)
T ss_dssp EEEECCTTCCHHHHHHHHHHHS----TTSEEEEECCSEEETTEEESSCBC---GGGC--BCHHHHHHH-HHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHhc----cCCeEEEecccccccccccccccc---Cccc--cchhHHHHH-HHHHHHHHHHh
Confidence 4554444444455556665554 688888877655433211110000 0000 000 11122 25555555555
Q ss_pred HhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHh
Q 012210 236 RAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGA 315 (468)
Q Consensus 236 ~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (468)
....+.. +++++|||+||.+++.++..+ +..+.+++.+++..+....
T Consensus 90 ~~~~~~~--~v~l~G~S~Gg~~a~~~a~~~-----p~~~~~~~~~~~~~~~~~~-------------------------- 136 (203)
T d2r8ba1 90 REHYQAG--PVIGLGFSNGANILANVLIEQ-----PELFDAAVLMHPLIPFEPK-------------------------- 136 (203)
T ss_dssp HHHHTCC--SEEEEEETHHHHHHHHHHHHS-----TTTCSEEEEESCCCCSCCC--------------------------
T ss_pred hhcCCCc--eEEEEEecCHHHHHHHHHHhh-----hhcccceeeeccccccccc--------------------------
Confidence 5555544 999999999999999999987 7888888888764331100
Q ss_pred HHHHhcCCCCCchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCc
Q 012210 316 LLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNI 395 (468)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~v 395 (468)
........
T Consensus 137 ------------------------------------------------------------------------~~~~~~~~ 144 (203)
T d2r8ba1 137 ------------------------------------------------------------------------ISPAKPTR 144 (203)
T ss_dssp ------------------------------------------------------------------------CCCCCTTC
T ss_pred ------------------------------------------------------------------------cccccccc
Confidence 01123468
Q ss_pred cEEEEecCCCCcCCHHHHHHHHHhCCCC--ceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhc
Q 012210 396 PILAIAGDQDLICPPEAVEETVKLLPED--LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 396 PvLiI~G~~D~ivp~~~~~~l~~~ip~~--~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~ 464 (468)
|++++||++|.++|++.++++.+.+... +++++++ ++ +|.... +..+.+.+||.+|
T Consensus 145 ~~~i~hG~~D~~vp~~~~~~~~~~L~~~g~~v~~~~~--~g-gH~~~~----------~~~~~~~~wl~~~ 202 (203)
T d2r8ba1 145 RVLITAGERDPICPVQLTKALEESLKAQGGTVETVWH--PG-GHEIRS----------GEIDAVRGFLAAY 202 (203)
T ss_dssp EEEEEEETTCTTSCHHHHHHHHHHHHHHSSEEEEEEE--SS-CSSCCH----------HHHHHHHHHHGGG
T ss_pred hhhccccCCCCcccHHHHHHHHHHHHHCCCCEEEEEE--CC-CCcCCH----------HHHHHHHHHHHhc
Confidence 9999999999999999999998887643 4567776 54 676442 2457789999886
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Probab=99.22 E-value=3.5e-11 Score=108.78 Aligned_cols=110 Identities=12% Similarity=0.007 Sum_probs=71.3
Q ss_pred ccccccccccccccchhhHHHHHHhhhhcCceEeccCccccccC---CccchHHHhhcccceEeecCChhhH--HhhhHH
Q 012210 155 SSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQER---LFSTIDDFQKQLDLIVQYDWDFDHY--LEEDVP 229 (468)
Q Consensus 155 ~~ll~~~~~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~---~~~~~~~l~~~~~~~~~~D~~~~~~--~~~D~~ 229 (468)
+.++..|+..|-...+..++++|+ .++.+++|+....... |... ..... . +.... ..+++.
T Consensus 24 p~vv~lHG~g~~~~~~~~l~~~l~----~~~~~l~~~~~~~~~~~~~~~~~------~~~~~--~--~~~~~~~~~~~l~ 89 (209)
T d3b5ea1 24 ECLFLLHGSGVDETTLVPLARRIA----PTATLVAARGRIPQEDGFRWFER------IDPTR--F--EQKSILAETAAFA 89 (209)
T ss_dssp CEEEEECCTTBCTTTTHHHHHHHC----TTSEEEEECCSEEETTEEESSCE------EETTE--E--CHHHHHHHHHHHH
T ss_pred CEEEEEcCCCCCHHHHHHHHHHhc----cCcEEEeeccCcCcccCcccccc------CCccc--c--chhhHHHHHHHHH
Confidence 445554555555556667777776 5788888876432211 1100 00000 1 11221 125666
Q ss_pred HHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccc
Q 012210 230 AAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASS 283 (468)
Q Consensus 230 a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~ 283 (468)
.+|+.+..+.+.+.++++++||||||.+++.++..+ |+.+.++|++++.
T Consensus 90 ~~l~~~~~~~~id~~ri~l~G~S~Gg~~a~~~a~~~-----p~~~~~~v~~~g~ 138 (209)
T d3b5ea1 90 AFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLH-----PGIVRLAALLRPM 138 (209)
T ss_dssp HHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHS-----TTSCSEEEEESCC
T ss_pred HHHHHHHHHhCcccCCEEEEeeCChHHHHHHHHHhC-----CCcceEEEEeCCc
Confidence 777777777777667999999999999999999997 8889999998763
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.08 E-value=4.5e-10 Score=104.11 Aligned_cols=69 Identities=14% Similarity=0.146 Sum_probs=52.0
Q ss_pred hhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEE
Q 012210 171 RDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIG 250 (468)
Q Consensus 171 ~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvG 250 (468)
+.+++.++ ..||.|+++|.....+ ..+.... +|+.++++++.+..... +++++|
T Consensus 57 ~~l~~~~~---~~g~~v~~~dYrl~p~--------------------~~~~~~~-~d~~~~~~~l~~~~~~~--~i~l~G 110 (263)
T d1vkha_ 57 NTIKSMDT---ESTVCQYSIEYRLSPE--------------------ITNPRNL-YDAVSNITRLVKEKGLT--NINMVG 110 (263)
T ss_dssp HHHHHHCT---TCCEEEEEECCCCTTT--------------------SCTTHHH-HHHHHHHHHHHHHHTCC--CEEEEE
T ss_pred HHHHHHHH---hCCeEEEEeccccCcc--------------------hhhhHHH-Hhhhhhhhccccccccc--ceeeec
Confidence 33455555 7899999988643211 1233444 89999999999887765 999999
Q ss_pred EehhHHHHHHHHHhc
Q 012210 251 HSMGGILLYAMLSRC 265 (468)
Q Consensus 251 hS~GG~ia~~~a~~~ 265 (468)
||+||.+++.++...
T Consensus 111 ~S~Gg~lal~~a~~~ 125 (263)
T d1vkha_ 111 HSVGATFIWQILAAL 125 (263)
T ss_dssp ETHHHHHHHHHHTGG
T ss_pred cCcHHHHHHHHHHhc
Confidence 999999999998865
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=99.00 E-value=6.7e-09 Score=103.29 Aligned_cols=97 Identities=14% Similarity=0.178 Sum_probs=70.9
Q ss_pred ccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcC------
Q 012210 167 AIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSK------ 240 (468)
Q Consensus 167 ~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~------ 240 (468)
+..-....+.++ .+||.|+..|.+|.++. .|... -++..+ . +|..++|+++..+..
T Consensus 122 ~~~~~~~~~~~~---~~GYavv~~D~RG~g~S----------~G~~~---~~~~~e-~-~D~~~~IeWl~~~~~~~~~~~ 183 (405)
T d1lnsa3 122 HGWTYSLNDYFL---TRGFASIYVAGVGTRSS----------DGFQT---SGDYQQ-I-YSMTAVIDWLNGRARAYTSRK 183 (405)
T ss_dssp CCCCCHHHHHHH---TTTCEEEEECCTTSTTS----------CSCCC---TTSHHH-H-HHHHHHHHHHTTSSCEESSTT
T ss_pred ccccccchHHHH---hCCCEEEEECCCCCCCC----------CCccc---cCChhh-h-hhHHHHHHHHHhccccccccc
Confidence 333344557788 99999999999998763 22211 123334 3 899999999976421
Q ss_pred --------CCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcccccc
Q 012210 241 --------PKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 286 (468)
Q Consensus 241 --------~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~ 286 (468)
-..++|+++|+|+||++.+..|+.. |+.++++|..++..+.
T Consensus 184 ~~~~~~q~WsnGkVGm~G~SY~G~~q~~aA~~~-----pp~LkAivp~~~~~d~ 232 (405)
T d1lnsa3 184 KTHEIKASWANGKVAMTGKSYLGTMAYGAATTG-----VEGLELILAEAGISSW 232 (405)
T ss_dssp CCCEECCTTEEEEEEEEEETHHHHHHHHHHTTT-----CTTEEEEEEESCCSBH
T ss_pred ccccccccccCCeeEEEecCHHHHHHHHHHhcC-----CccceEEEecCccccH
Confidence 1136899999999999999999875 8899999998887664
|
| >d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Uncharacterized protein TM1040 2492 species: Silicibacter sp. tm1040 [TaxId: 292414]
Probab=98.89 E-value=8.5e-09 Score=96.30 Aligned_cols=170 Identities=12% Similarity=0.118 Sum_probs=108.5
Q ss_pred ccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcE
Q 012210 167 AIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKL 246 (468)
Q Consensus 167 ~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v 246 (468)
..+...+++.|+ .+||.|++++..... ..++.+.. +|+.++++++..+.+ ++|
T Consensus 78 ~~~~~~~a~~l~---~~G~~Vv~~~YRl~p--------------------~~~~p~~~-~d~~~a~~~~~~~~~---~rI 130 (261)
T d2pbla1 78 KSSWSHLAVGAL---SKGWAVAMPSYELCP--------------------EVRISEIT-QQISQAVTAAAKEID---GPI 130 (261)
T ss_dssp GGGCGGGGHHHH---HTTEEEEEECCCCTT--------------------TSCHHHHH-HHHHHHHHHHHHHSC---SCE
T ss_pred hhHhhhHHHHHh---cCCceeecccccccc--------------------cccCchhH-HHHHHHHHHHHhccc---Cce
Confidence 345566788888 899999998875321 12355665 999999999998864 499
Q ss_pred EEEEEehhHHHHHHHHHhcCCC-CCcccccceeEEccccccCCchhhHHhhcccCchhhhcCCCCcchHhHHHHhcCCCC
Q 012210 247 LAIGHSMGGILLYAMLSRCGFE-GRESRLAAIVTLASSLDYTSSKSTLKLLLPLADPAQALNVPVVPLGALLTAAYPLSS 325 (468)
Q Consensus 247 ~lvGhS~GG~ia~~~a~~~~~~-~~p~~V~~lVllap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (468)
+++|||.||.++..++...... .....+++++.+++..+......
T Consensus 131 ~l~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------- 176 (261)
T d2pbla1 131 VLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLR---------------------------------- 176 (261)
T ss_dssp EEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGG----------------------------------
T ss_pred EEEEcchHHHHHHHHhcCcccccchhhchhhhhccccccccchhhh----------------------------------
Confidence 9999999999998776542000 00234677788777655322100
Q ss_pred CchhHHHHHHHhhhccccCCHHHHHHHHhhccCCCcHHHHHHHHHHHhcCcccccCCccccccccCccCccEEEEecCCC
Q 012210 326 SPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQD 405 (468)
Q Consensus 326 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vPvLiI~G~~D 405 (468)
.+....+ ..+++.... .. ......+.++|+|+++|++|
T Consensus 177 ------~~~~~~~----~~~~~~~~~-------~S-------------------------P~~~~~~~~~P~li~~G~~D 214 (261)
T d2pbla1 177 ------TSMNEKF----KMDADAAIA-------ES-------------------------PVEMQNRYDAKVTVWVGGAE 214 (261)
T ss_dssp ------STTHHHH----CCCHHHHHH-------TC-------------------------GGGCCCCCSCEEEEEEETTS
T ss_pred ------hhhcccc----cCCHHHHHH-------hC-------------------------chhhcccCCCeEEEEEecCC
Confidence 0000000 011221110 00 11345667899999999999
Q ss_pred CcCCHHHHHHHHHhCCCCceeEEEecCCCCCCCCccccc
Q 012210 406 LICPPEAVEETVKLLPEDLVTYKVFGEPSGPHYAHYDLV 444 (468)
Q Consensus 406 ~ivp~~~~~~l~~~ip~~~~~~~v~~~~~agH~~H~e~~ 444 (468)
..++.++++.+.+.++. +.+.+ ++..|+.-++-+
T Consensus 215 ~~~~~~qs~~~~~~l~~---~~~~~--~~~~HF~vi~~l 248 (261)
T d2pbla1 215 RPAFLDQAIWLVEAWDA---DHVIA--FEKHHFNVIEPL 248 (261)
T ss_dssp CHHHHHHHHHHHHHHTC---EEEEE--TTCCTTTTTGGG
T ss_pred CchHHHHHHHHHHHhCC---CceEe--CCCCchhHHHhh
Confidence 98888899999998863 55666 788886655433
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=98.86 E-value=1.9e-08 Score=90.91 Aligned_cols=59 Identities=22% Similarity=0.233 Sum_probs=45.4
Q ss_pred CccEEEEecCCCCcCCHHHHHHHHHhCCCC--ceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 394 NIPILAIAGDQDLICPPEAVEETVKLLPED--LVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 394 ~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~--~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
++|+|++||++|.++|.+.++++++.+... .++++.+ + ++|... .+....+.+||.++.
T Consensus 157 ~~pvl~~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~--~-~gH~i~----------~~~~~~i~~wl~~~l 217 (218)
T d1auoa_ 157 RIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEY--P-MGHEVL----------PQEIHDIGAWLAARL 217 (218)
T ss_dssp TCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEE--S-CSSSCC----------HHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCCCccCHHHHHHHHHHHHHCCCCEEEEEE--C-CCCccC----------HHHHHHHHHHHHHhc
Confidence 589999999999999999999988877654 4567766 4 567433 334678999998753
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=98.83 E-value=6.9e-09 Score=96.47 Aligned_cols=104 Identities=11% Similarity=0.035 Sum_probs=68.4
Q ss_pred cccccccc--ccccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHH
Q 012210 155 SSLLERRQ--SSAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAM 232 (468)
Q Consensus 155 ~~ll~~~~--~~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i 232 (468)
..|+--|. ..|-...++.+++.|. ..+.|++.++.|++.. ... ..++++++ +++.+.
T Consensus 43 ~~l~c~~~~~~gg~~~~y~~La~~L~----~~~~V~al~~pG~~~~------------e~~---~~s~~~~a-~~~~~~- 101 (255)
T d1mo2a_ 43 VTVICCAGTAAISGPHEFTRLAGALR----GIAPVRAVPQPGYEEG------------EPL---PSSMAAVA-AVQADA- 101 (255)
T ss_dssp SEEEEECCCSSSCSGGGGHHHHHHHT----TTCCEEEECCTTSSTT------------CCE---ESSHHHHH-HHHHHH-
T ss_pred CeEEEECCCCCCCCHHHHHHHHHhcC----CCceEEEEeCCCcCCC------------CCC---CCCHHHHH-HHHHHH-
Confidence 34555443 3455567788888876 5689999999887541 111 12455665 444443
Q ss_pred HHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccc
Q 012210 233 EYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 233 ~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
|+...+. ++++|+||||||.+++.+|.+++.. ..+|..++++++..+
T Consensus 102 --i~~~~~~--~P~~L~GhS~Gg~vA~e~A~~l~~~--g~~v~~lvlld~~~p 148 (255)
T d1mo2a_ 102 --VIRTQGD--KPFVVAGHSAGALMAYALATELLDR--GHPPRGVVLIDVYPP 148 (255)
T ss_dssp --HHHTTSS--SCEEEEECSTTHHHHHHHHHHHHHH--TCCCSEEEEEECSCS
T ss_pred --HHHhCCC--CCEEEEEeCCcHHHHHHHHHhhHhc--CCCccEEEEECCCCC
Confidence 4333332 4899999999999999999876211 346889999987543
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Probab=98.81 E-value=2.4e-08 Score=95.51 Aligned_cols=88 Identities=16% Similarity=0.043 Sum_probs=68.4
Q ss_pred hhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEE
Q 012210 170 IRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAI 249 (468)
Q Consensus 170 i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lv 249 (468)
...+++.|+ ..||.|+.+|+.+++.. +..... +++.+.|+++....+.+ ||.+|
T Consensus 49 ~~~~~~~L~---~~Gy~v~~~d~~g~g~~--------------------d~~~sa-e~la~~i~~v~~~~g~~--kV~lV 102 (317)
T d1tcaa_ 49 DSNWIPLST---QLGYTPCWISPPPFMLN--------------------DTQVNT-EYMVNAITALYAGSGNN--KLPVL 102 (317)
T ss_dssp TTTHHHHHH---TTTCEEEEECCTTTTCS--------------------CHHHHH-HHHHHHHHHHHHHTTSC--CEEEE
T ss_pred HHHHHHHHH---hCCCeEEEecCCCCCCC--------------------chHhHH-HHHHHHHHHHHHhccCC--ceEEE
Confidence 456888888 99999999888765321 123333 78889999999888765 99999
Q ss_pred EEehhHHHHHHHHHhcCCCCCcccccceeEEccccc
Q 012210 250 GHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 250 GhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
||||||.++..++.+++.. ..+|+.+|.++++..
T Consensus 103 GhS~GG~~a~~~l~~~p~~--~~~V~~~v~i~~~~~ 136 (317)
T d1tcaa_ 103 TWSQGGLVAQWGLTFFPSI--RSKVDRLMAFAPDYK 136 (317)
T ss_dssp EETHHHHHHHHHHHHCGGG--TTTEEEEEEESCCTT
T ss_pred EeCchHHHHHHHHHHCCCc--chheeEEEEeCCCCC
Confidence 9999999999999887211 257999999998754
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Probab=98.76 E-value=1.5e-10 Score=109.45 Aligned_cols=74 Identities=22% Similarity=0.201 Sum_probs=53.2
Q ss_pred ccccCccCccEEEEecCCCCcCCHHH-----HHHHHHhCC--CCceeEEEec---CCCCCCCCcccccccccchhhHHHH
Q 012210 387 KDHIHKCNIPILAIAGDQDLICPPEA-----VEETVKLLP--EDLVTYKVFG---EPSGPHYAHYDLVGGRMAVEQVYPC 456 (468)
Q Consensus 387 ~~~l~~I~vPvLiI~G~~D~ivp~~~-----~~~l~~~ip--~~~~~~~v~~---~~~agH~~H~e~~~~~~~pe~v~~~ 456 (468)
...+..+++|+|+++|++|.++|+.. .+.+.+.+. +.+.+++.+. .++++|+.|.| ...+++.+.
T Consensus 234 ~~~~~~~~~P~Lii~G~~D~~~p~~~~~~~~~~~~~~~l~~~g~~~~~~~lp~~gi~G~gH~~~~e-----~~~~~va~~ 308 (318)
T d1qlwa_ 234 EDVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQD-----RNNLQVADL 308 (318)
T ss_dssp GGCGGGTTSCEEEEECSSCTTCTTTHHHHHHHHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGS-----TTHHHHHHH
T ss_pred hhhhhhccCCEEEEecCcCcccChhhhHHHHHHHHHHHHHHhCCCcEEEEecccccCCCcCccccC-----cCHHHHHHH
Confidence 44677889999999999999998543 223333222 2245777761 24678999987 345899999
Q ss_pred HHHHHhhcc
Q 012210 457 IVQFLGRYD 465 (468)
Q Consensus 457 I~~FL~~~~ 465 (468)
|.+||++|.
T Consensus 309 i~~wL~~~~ 317 (318)
T d1qlwa_ 309 ILDWIGRNT 317 (318)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHhcc
Confidence 999999985
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Probab=98.66 E-value=2.7e-08 Score=95.57 Aligned_cols=88 Identities=18% Similarity=0.142 Sum_probs=66.3
Q ss_pred cchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEE
Q 012210 168 IQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLL 247 (468)
Q Consensus 168 ~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~ 247 (468)
.+.+.+...|+ .+||.|+++|+.+++..-. ..... +++.+.++.+....+.+ +++
T Consensus 28 ~~~~~~~~~L~---~~G~~V~~~~~~g~g~s~~-------------------~~~~~-~~l~~~i~~~~~~~~~~--~v~ 82 (319)
T d1cvla_ 28 DYWYGIQSDLQ---SHGAKVYVANLSGFQSDDG-------------------PNGRG-EQLLAYVKQVLAATGAT--KVN 82 (319)
T ss_dssp ESSTTHHHHHH---HTTCCEEECCCBCSSCTTS-------------------TTSHH-HHHHHHHHHHHHHHCCS--CEE
T ss_pred hhHHHHHHHHH---HCCCEEEEecCCCCCCCCC-------------------CcccH-HHHHHHHHHHHHHhCCC--CEE
Confidence 35678889999 9999999999988754100 01112 44555555555555554 999
Q ss_pred EEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccc
Q 012210 248 AIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 248 lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
+|||||||.++..++..+ |++|+++|+++++..
T Consensus 83 lvGhS~GG~~~~~~~~~~-----p~~v~~vv~i~~p~~ 115 (319)
T d1cvla_ 83 LIGHSQGGLTSRYVAAVA-----PQLVASVTTIGTPHR 115 (319)
T ss_dssp EEEETTHHHHHHHHHHHC-----GGGEEEEEEESCCTT
T ss_pred EEeccccHHHHHHHHHHC-----ccccceEEEECCCCC
Confidence 999999999999999998 999999999998644
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=98.65 E-value=1.3e-07 Score=93.05 Aligned_cols=103 Identities=17% Similarity=0.123 Sum_probs=71.7
Q ss_pred hhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEE
Q 012210 171 RDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIG 250 (468)
Q Consensus 171 ~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvG 250 (468)
...++.|+ .+||.|+.+|.+|.+...... ..+....... ..+...+ + .|..++++++..+.....++|+++|
T Consensus 78 ~~~~~~~a---~~Gy~vv~~d~RG~g~S~G~~-~~~~~~~~~~--~~~~~~~-~-~D~~~~i~w~~~~~~~~~~~vg~~G 149 (381)
T d1mpxa2 78 SAGDDVFV---EGGYIRVFQDVRGKYGSEGDY-VMTRPLRGPL--NPSEVDH-A-TDAWDTIDWLVKNVSESNGKVGMIG 149 (381)
T ss_dssp CGGGHHHH---HTTCEEEEEECTTSTTCCSCC-CTTCCCSBTT--BCSSCCH-H-HHHHHHHHHHHHHCTTEEEEEEEEE
T ss_pred hhHHHHHH---hCCCEEEEEecCccCCCCCce-eccchhhhhc--ccchhHH-H-HHHHHHHHHHhhcCCcCccceeeec
Confidence 44567788 999999999999976631110 0000000000 0111223 3 8999999999888655557999999
Q ss_pred EehhHHHHHHHHHhcCCCCCcccccceeEEcccccc
Q 012210 251 HSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 286 (468)
Q Consensus 251 hS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~ 286 (468)
+|+||.+++.+|... ++.++++|..++..+.
T Consensus 150 ~SygG~~~~~~a~~~-----~~~l~a~v~~~~~~d~ 180 (381)
T d1mpxa2 150 SSYEGFTVVMALTNP-----HPALKVAVPESPMIDG 180 (381)
T ss_dssp ETHHHHHHHHHHTSC-----CTTEEEEEEESCCCCT
T ss_pred ccHHHHHHHHHHhcc-----ccccceeeeecccccc
Confidence 999999999888775 8889999999887654
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Probab=98.62 E-value=2.8e-08 Score=96.05 Aligned_cols=110 Identities=20% Similarity=0.180 Sum_probs=77.2
Q ss_pred hccccccccccccccc----cchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhh
Q 012210 152 GKLSSLLERRQSSAIA----IQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEED 227 (468)
Q Consensus 152 ~~~~~ll~~~~~~G~~----~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D 227 (468)
++.+.+|..+...+.. ......++.++ .+||.|+++|..|.++. .|. ++....+ ..|
T Consensus 29 ~~~P~il~~~pyg~~~~~~~~~~~~~~~~~a---~~GY~vv~~d~RG~g~S----------~G~----~~~~~~~--~~d 89 (347)
T d1ju3a2 29 GPVPVLLVRNPYDKFDVFAWSTQSTNWLEFV---RDGYAVVIQDTRGLFAS----------EGE----FVPHVDD--EAD 89 (347)
T ss_dssp SCEEEEEEEESSCTTCCHHHHTTSCCTHHHH---HTTCEEEEEECTTSTTC----------CSC----CCTTTTH--HHH
T ss_pred CCEEEEEEEcCCCCccccCcCcccHHHHHHH---HCCCEEEEEeeCCcccc----------CCc----cccccch--hhh
Confidence 3445566654333221 11223456677 99999999999988663 121 1212222 278
Q ss_pred HHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcccccc
Q 012210 228 VPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 286 (468)
Q Consensus 228 ~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~ 286 (468)
..++++++..+.-++ ++|+++|+|+||.+++.+|+.. ++.++++|...+..+.
T Consensus 90 ~~d~i~w~~~q~~~~-grVg~~G~SygG~~~~~~A~~~-----~~~l~aiv~~~~~~d~ 142 (347)
T d1ju3a2 90 AEDTLSWILEQAWCD-GNVGMFGVSYLGVTQWQAAVSG-----VGGLKAIAPSMASADL 142 (347)
T ss_dssp HHHHHHHHHHSTTEE-EEEEECEETHHHHHHHHHHTTC-----CTTEEEBCEESCCSCT
T ss_pred HHHHHHHHHhhccCC-cceEeeeccccccchhhhhhcc-----cccceeeeeccccchh
Confidence 888999999887765 7999999999999999999874 7889999999887764
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.61 E-value=3.8e-08 Score=92.97 Aligned_cols=84 Identities=19% Similarity=0.150 Sum_probs=65.0
Q ss_pred cchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEE
Q 012210 168 IQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLL 247 (468)
Q Consensus 168 ~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~ 247 (468)
.+++.+.+.|. .+||+|+++|+.+++. .+..+ +++.+.|+.+....+.+ |++
T Consensus 26 ~yw~~i~~~L~---~~G~~v~~~~~~~~~~----------------------~~~~a-~~l~~~i~~~~~~~g~~--~v~ 77 (285)
T d1ex9a_ 26 DYWFGIPSALR---RDGAQVYVTEVSQLDT----------------------SEVRG-EQLLQQVEEIVALSGQP--KVN 77 (285)
T ss_dssp ESSTTHHHHHH---HTTCCEEEECCCSSSC----------------------HHHHH-HHHHHHHHHHHHHHCCS--CEE
T ss_pred hhHHHHHHHHH---hCCCEEEEeCCCCCCC----------------------cHHHH-HHHHHHHHHHHHHcCCC--eEE
Confidence 34677899999 8999999999977643 11112 44555555555555654 999
Q ss_pred EEEEehhHHHHHHHHHhcCCCCCcccccceeEEcccc
Q 012210 248 AIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSL 284 (468)
Q Consensus 248 lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~ 284 (468)
+|||||||.++..++..+ |++|+++|++++|-
T Consensus 78 ligHS~GG~~~r~~~~~~-----p~~v~~lv~i~tPh 109 (285)
T d1ex9a_ 78 LIGHSHGGPTIRYVAAVR-----PDLIASATSVGAPH 109 (285)
T ss_dssp EEEETTHHHHHHHHHHHC-----GGGEEEEEEESCCT
T ss_pred EEEECccHHHHHHHHHHC-----CccceeEEEECCCC
Confidence 999999999999999987 99999999998764
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=98.61 E-value=1.6e-07 Score=91.41 Aligned_cols=97 Identities=18% Similarity=0.156 Sum_probs=63.7
Q ss_pred hhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhc-CCCCCcEEE
Q 012210 170 IRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQS-KPKDGKLLA 248 (468)
Q Consensus 170 i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~-~~~~~~v~l 248 (468)
.+.+++.++ .+||.|+++|....... ..++.+.... +|+.++++++..+. ..+..++++
T Consensus 127 ~~~~~~~la---~~g~~VvsvdYRla~~~----------------~pe~~~p~~l-~D~~~a~~wl~~~~~~~~~~ri~i 186 (358)
T d1jkma_ 127 HRRWCTDLA---AAGSVVVMVDFRNAWTA----------------EGHHPFPSGV-EDCLAAVLWVDEHRESLGLSGVVV 186 (358)
T ss_dssp HHHHHHHHH---HTTCEEEEEECCCSEET----------------TEECCTTHHH-HHHHHHHHHHHHTHHHHTEEEEEE
T ss_pred cchHHHHHH---hhhheeeeeeecccccc----------------cccCCCchhh-HHHHHHHHHHHHhccccCCcccee
Confidence 356778888 89999999776542110 0122344544 99999999997642 112248999
Q ss_pred EEEehhHHHHHHHHHhcCCCCCcccccceeEEcccccc
Q 012210 249 IGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 286 (468)
Q Consensus 249 vGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~ 286 (468)
+|+|.||.+++.++...........+.+++++.|....
T Consensus 187 ~G~SAGG~La~~~a~~~~~~~~~~~~~~~~~~~p~~~~ 224 (358)
T d1jkma_ 187 QGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISG 224 (358)
T ss_dssp EEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCC
T ss_pred ecccCchHHHHHHHHHHhhcCCCccccccccccceecc
Confidence 99999999998777653112224567777777775553
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.46 E-value=4e-07 Score=86.62 Aligned_cols=100 Identities=15% Similarity=0.137 Sum_probs=65.2
Q ss_pred ccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhc---CC
Q 012210 165 AIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQS---KP 241 (468)
Q Consensus 165 G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~---~~ 241 (468)
|-......++++++. ..|+.|+++|.....+ +.+.... +|...+++++..+. +.
T Consensus 93 g~~~~~~~~~~~l~~--~~g~~Vv~v~Yrlap~--------------------~~~p~~~-~d~~~a~~~~~~~~~~~~~ 149 (311)
T d1jjia_ 93 CSIESHDALCRRIAR--LSNSTVVSVDYRLAPE--------------------HKFPAAV-YDCYDATKWVAENAEELRI 149 (311)
T ss_dssp CCTGGGHHHHHHHHH--HHTSEEEEEECCCTTT--------------------SCTTHHH-HHHHHHHHHHHHTHHHHTE
T ss_pred CChhhhhhhhhhhhh--cCCcEEEEeccccccc--------------------cccchhh-hhhhhhhhHHHHhHHHhCc
Confidence 444555667777761 4599999977653211 1333444 88888888887643 33
Q ss_pred CCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCC
Q 012210 242 KDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTS 288 (468)
Q Consensus 242 ~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~ 288 (468)
+.+++.++|+|.||.+++.++...... ......+.+++.|..+...
T Consensus 150 d~~ri~v~G~SaGG~la~~~~~~~~~~-~~~~~~~~~l~~p~~~~~~ 195 (311)
T d1jjia_ 150 DPSKIFVGGDSAGGNLAAAVSIMARDS-GEDFIKHQILIYPVVNFVA 195 (311)
T ss_dssp EEEEEEEEEETHHHHHHHHHHHHHHHT-TCCCEEEEEEESCCCCSSS
T ss_pred ChhHEEEEeeecCCcceeechhhhhhc-cccccceeeeecceeeecc
Confidence 335899999999999988777653111 1345677788888766543
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Probab=98.46 E-value=1.8e-06 Score=81.93 Aligned_cols=91 Identities=21% Similarity=0.145 Sum_probs=57.4
Q ss_pred hcccccccccc--c-cccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhH
Q 012210 152 GKLSSLLERRQ--S-SAIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDV 228 (468)
Q Consensus 152 ~~~~~ll~~~~--~-~G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~ 228 (468)
+..+.++-.|+ + .|-......++.+++ ...||.|+.+|.....+ ..+.... +|.
T Consensus 76 ~~~Pvvv~iHGGG~~~g~~~~~~~~~~~la--~~~G~~V~~vdYrl~pe--------------------~~~~~~~-~d~ 132 (317)
T d1lzla_ 76 GPVPVLLWIHGGGFAIGTAESSDPFCVEVA--RELGFAVANVEYRLAPE--------------------TTFPGPV-NDC 132 (317)
T ss_dssp SCEEEEEEECCSTTTSCCGGGGHHHHHHHH--HHHCCEEEEECCCCTTT--------------------SCTTHHH-HHH
T ss_pred CCCcEEEEecCcccccccccccchHHHhHH--hhcCCcccccccccccc--------------------ccccccc-ccc
Confidence 34444554332 1 244455556666666 13599999988654311 1233444 778
Q ss_pred HHHHHHHHhh---cCCCCCcEEEEEEehhHHHHHHHHHhc
Q 012210 229 PAAMEYIRAQ---SKPKDGKLLAIGHSMGGILLYAMLSRC 265 (468)
Q Consensus 229 ~a~i~~l~~~---~~~~~~~v~lvGhS~GG~ia~~~a~~~ 265 (468)
.+++.++... .+.+.++|+++|+|.||.+++.++...
T Consensus 133 ~~~~~~~~~~~~~~g~D~~rI~l~G~SaGg~la~~~~~~~ 172 (317)
T d1lzla_ 133 YAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKA 172 (317)
T ss_dssp HHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHhCCCHHHEEEEEeccccHHHHHHHhhh
Confidence 8888877654 334345899999999999999888763
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=98.38 E-value=2.6e-06 Score=83.43 Aligned_cols=103 Identities=13% Similarity=0.034 Sum_probs=70.6
Q ss_pred hhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEE
Q 012210 171 RDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIG 250 (468)
Q Consensus 171 ~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvG 250 (468)
...++.++ .+||.|+.+|.+|.++..... ..+... . ...-.+...+ . +|..++|+++..+.....++|.++|
T Consensus 83 ~~~~~~~a---~~Gy~vv~~d~RG~g~S~G~~-~~~~~~-~-~~~~~~~~~e-~-~D~~~~i~w~~~q~~~~~g~vg~~G 154 (385)
T d2b9va2 83 PQGDDVFV---EGGYIRVFQDIRGKYGSQGDY-VMTRPP-H-GPLNPTKTDE-T-TDAWDTVDWLVHNVPESNGRVGMTG 154 (385)
T ss_dssp CGGGHHHH---HTTCEEEEEECTTSTTCCSCC-CTTCCC-S-BTTBCSSCCH-H-HHHHHHHHHHHHSCTTEEEEEEEEE
T ss_pred chHHHHHH---hCCcEEEEEcCCcccCCCCce-eecccc-c-cccccchhhH-H-HHHHHHHHHHHhccCccccceeecc
Confidence 34566788 999999999999986531110 000000 0 0000112223 3 8999999999888655457999999
Q ss_pred EehhHHHHHHHHHhcCCCCCcccccceeEEcccccc
Q 012210 251 HSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 286 (468)
Q Consensus 251 hS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~ 286 (468)
+|+||.+++.+|... ++.++++|...+..+.
T Consensus 155 ~SygG~~~~~~a~~~-----~~~l~a~~~~~~~~d~ 185 (385)
T d2b9va2 155 SSYEGFTVVMALLDP-----HPALKVAAPESPMVDG 185 (385)
T ss_dssp EEHHHHHHHHHHTSC-----CTTEEEEEEEEECCCT
T ss_pred ccHHHHHHHHHHhcc-----CCcceEEEEecccccc
Confidence 999999999999875 7889999988776554
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.37 E-value=7.5e-06 Score=74.92 Aligned_cols=68 Identities=16% Similarity=0.093 Sum_probs=49.5
Q ss_pred cCccEEEEecCCCCcCCHHHHHHHHHhCC---------CCceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhh
Q 012210 393 CNIPILAIAGDQDLICPPEAVEETVKLLP---------EDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 393 I~vPvLiI~G~~D~ivp~~~~~~l~~~ip---------~~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~ 463 (468)
...|+|++||+.|..||+..+.++++.+. +..++++++ |+++|..... ..+.-+.+..|.+||++
T Consensus 199 ~~pP~LiihG~~D~~Vp~~~s~~l~~aL~~~g~~~~~~~~~~~l~~~--~~~gHgf~~~----~~~~~~~~~~~~~fl~k 272 (280)
T d1qfma2 199 QYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVD--TKAGHGAGKP----TAKVIEEVSDMFAFIAR 272 (280)
T ss_dssp CCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEE--SSCCSSTTCC----HHHHHHHHHHHHHHHHH
T ss_pred CCCceEEeecccCCCCCHHHHHHHHHHHHHhhhhhhcCCCcEEEEEe--CcCCCCCCCc----HHHHHHHHHHHHHHHHH
Confidence 34589999999999999999999888872 335677777 9999954432 11222445678899998
Q ss_pred ccC
Q 012210 464 YDS 466 (468)
Q Consensus 464 ~~~ 466 (468)
+..
T Consensus 273 ~L~ 275 (280)
T d1qfma2 273 CLN 275 (280)
T ss_dssp HHT
T ss_pred hcC
Confidence 853
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Probab=98.37 E-value=2.3e-08 Score=81.89 Aligned_cols=65 Identities=9% Similarity=-0.100 Sum_probs=50.8
Q ss_pred hhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHH
Q 012210 179 NMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILL 258 (468)
Q Consensus 179 ~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia 258 (468)
+.+.++|+|+++|+.|++..- ..+++.++++ +|+.++++.+... +++++||||||.++
T Consensus 36 ~~L~~~yrvi~~DlpG~G~S~---------------~p~~s~~~~a-~~i~~ll~~L~i~------~~~viG~S~Gg~ia 93 (122)
T d2dsta1 36 EALPEGYAFYLLDLPGYGRTE---------------GPRMAPEELA-HFVAGFAVMMNLG------APWVLLRGLGLALG 93 (122)
T ss_dssp SCCCTTSEEEEECCTTSTTCC---------------CCCCCHHHHH-HHHHHHHHHTTCC------SCEEEECGGGGGGH
T ss_pred ccccCCeEEEEEeccccCCCC---------------CcccccchhH-HHHHHHHHHhCCC------CcEEEEeCccHHHH
Confidence 445689999999999996520 0135677776 8888888877543 89999999999999
Q ss_pred HHHHHhc
Q 012210 259 YAMLSRC 265 (468)
Q Consensus 259 ~~~a~~~ 265 (468)
+.+++..
T Consensus 94 ~~laa~~ 100 (122)
T d2dsta1 94 PHLEALG 100 (122)
T ss_dssp HHHHHTT
T ss_pred HHHHhhc
Confidence 9999864
|
| >d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=98.17 E-value=4e-06 Score=78.90 Aligned_cols=66 Identities=12% Similarity=-0.073 Sum_probs=44.6
Q ss_pred ccEEEEecCCCCcCCHHHHHHHHHhCCC--CceeEEEecCCCCCCCCcccccccccchhhHHHHHHHHHhhcc
Q 012210 395 IPILAIAGDQDLICPPEAVEETVKLLPE--DLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 395 vPvLiI~G~~D~ivp~~~~~~l~~~ip~--~~~~~~v~~~~~agH~~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
.|+|+++|+.|.++ ..+..+++.+.. ..++++++ ++.+|..+.- .....+..+..+.+.+||++..
T Consensus 240 Pp~li~~g~~D~l~--~~~~~~~~~L~~~G~~v~~~~~--~g~~Hgf~~~-~~~~~~a~~~~~~~~~fl~~~L 307 (308)
T d1u4na_ 240 PPAYIATAQYDPLR--DVGKLYAEALNKAGVKVEIENF--EDLIHGFAQF-YSLSPGATKALVRIAEKLRDAL 307 (308)
T ss_dssp CCEEEEEEEECTTH--HHHHHHHHHHHHTTCCEEEEEE--EEEETTGGGG-TTTSHHHHHHHHHHHHHHHHHH
T ss_pred CCeeEEecCcCCch--HHHHHHHHHHHHCCCCEEEEEE--CCCCEeCccc-CCCCHHHHHHHHHHHHHHHHhh
Confidence 58999999999765 456667666643 35577776 8888854321 1111244678889999998753
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.16 E-value=2.7e-06 Score=79.41 Aligned_cols=99 Identities=10% Similarity=-0.037 Sum_probs=64.0
Q ss_pred HHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEe
Q 012210 173 LSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHS 252 (468)
Q Consensus 173 ~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS 252 (468)
+.+.++ ..|+.+++|+............. ...........++.+ -+.+++.+|..+.+.+.+++.++|+|
T Consensus 58 ~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~---~~~el~~~i~~~~~~d~~r~~i~G~S 127 (288)
T d1sfra_ 58 AFEWYD---QSGLSVVMPVGGQSSFYSDWYQP----ACGKAGCQTYKWETF---LTSELPGWLQANRHVKPTGSAVVGLS 127 (288)
T ss_dssp HHHHHT---TSSCEEEEECCCTTCTTCBCSSC----EEETTEEECCBHHHH---HHTHHHHHHHHHHCBCSSSEEEEEET
T ss_pred HHHHHH---hCCCEEEEeccCCCCCCccccCc----ccccccccchhHHHH---HHHHhHHHHHHhcCCCCCceEEEEEc
Confidence 344555 78999999887554321110000 001111112233333 34556666677777666789999999
Q ss_pred hhHHHHHHHHHhcCCCCCcccccceeEEcccccc
Q 012210 253 MGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 286 (468)
Q Consensus 253 ~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~ 286 (468)
|||.+|+.++.++ |+.+.+++.+++..+.
T Consensus 128 ~GG~~A~~~a~~~-----pd~f~av~~~Sg~~~~ 156 (288)
T d1sfra_ 128 MAASSALTLAIYH-----PQQFVYAGAMSGLLDP 156 (288)
T ss_dssp HHHHHHHHHHHHC-----TTTEEEEEEESCCSCT
T ss_pred cHHHHHHHHHHhc-----cccccEEEEecCcccc
Confidence 9999999999998 9999999999887654
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Probab=98.13 E-value=3.7e-06 Score=79.98 Aligned_cols=49 Identities=18% Similarity=0.162 Sum_probs=38.5
Q ss_pred ccCccEEEEecCCCCcCCHHHHHHHHHhCCC----CceeEEEecCCCCCCCCccc
Q 012210 392 KCNIPILAIAGDQDLICPPEAVEETVKLLPE----DLVTYKVFGEPSGPHYAHYD 442 (468)
Q Consensus 392 ~I~vPvLiI~G~~D~ivp~~~~~~l~~~ip~----~~~~~~v~~~~~agH~~H~e 442 (468)
..+.|++++||.+|.+||+..++.+++.+.. ..++++.. ++++|....+
T Consensus 88 ~~~~pvll~hG~~D~~Vpp~~s~~l~~~l~~~~~~~~v~yv~~--~gagH~fpT~ 140 (318)
T d2d81a1 88 LGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTT--TGAVHTFPTD 140 (318)
T ss_dssp GGGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEE--TTCCSSEEES
T ss_pred cCCCCEEEEecCCCCCcCHHHHHHHHHHHHcCcCCCceEEEEe--CCCCCCCCCC
Confidence 3568999999999999999999998887754 24566666 8888865543
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Probab=98.03 E-value=3.7e-06 Score=76.83 Aligned_cols=55 Identities=16% Similarity=0.203 Sum_probs=40.8
Q ss_pred hhHHHHHHHHHhhcC--CCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccc
Q 012210 226 EDVPAAMEYIRAQSK--PKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~--~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
..+.+++.++..... .+.++++++|+|+||..++.++.+| |+.+.+++.+++...
T Consensus 115 ~~~~~li~~i~~~~~~~~d~~~i~i~G~S~GG~~a~~~a~~~-----Pd~F~~v~~~sg~~~ 171 (255)
T d1jjfa_ 115 DLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTN-----LDKFAYIGPISAAPN 171 (255)
T ss_dssp HHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTC-----TTTCSEEEEESCCTT
T ss_pred HHHHHHHHHHHHhhccccccceeEeeeccchhHHHHHHHHhC-----CCcccEEEEEccCcC
Confidence 334444555555433 3345799999999999999999998 899999999877543
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.01 E-value=4.3e-05 Score=70.85 Aligned_cols=99 Identities=15% Similarity=0.187 Sum_probs=61.9
Q ss_pred HHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEe
Q 012210 173 LSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHS 252 (468)
Q Consensus 173 ~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS 252 (468)
+.+.++ ..|+.|+.|+--..+ |..... .............+.++..++++..| ..+...+.+++.+.|+|
T Consensus 53 ~~~~~~---~~~~ivV~P~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~el~~~i---~~~~~~d~~r~~i~G~S 122 (280)
T d1dqza_ 53 AFEEYY---QSGLSVIMPVGGQSS--FYTDWY--QPSQSNGQNYTYKWETFLTREMPAWL---QANKGVSPTGNAAVGLS 122 (280)
T ss_dssp HHHHHT---TSSSEEEEECCCTTC--TTSBCS--SSCTTTTCCSCCBHHHHHHTHHHHHH---HHHHCCCSSSCEEEEET
T ss_pred HHHHHH---hCCcEEEEECCCCCC--cCcccc--CCcccccCCcchhHHHHHHHHHHHHH---HHhcCCCCCceEEEEec
Confidence 445555 799999999852211 110000 00000011122245555545555554 45555555689999999
Q ss_pred hhHHHHHHHHHhcCCCCCcccccceeEEcccccc
Q 012210 253 MGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 286 (468)
Q Consensus 253 ~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~ 286 (468)
|||..++.+|.++ |+++.+++.+++....
T Consensus 123 mGG~~Al~lA~~~-----Pd~F~av~s~SG~~~~ 151 (280)
T d1dqza_ 123 MSGGSALILAAYY-----PQQFPYAASLSGFLNP 151 (280)
T ss_dssp HHHHHHHHHHHHC-----TTTCSEEEEESCCCCT
T ss_pred hHHHHHHHHHHhC-----cCceeEEEEecCccCc
Confidence 9999999999998 9999999999987654
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Probab=97.83 E-value=2.7e-05 Score=70.62 Aligned_cols=59 Identities=12% Similarity=0.220 Sum_probs=42.4
Q ss_pred hHHhhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcccccc
Q 012210 222 HYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDY 286 (468)
Q Consensus 222 ~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~ 286 (468)
++..+++...++.... ...+.+++.++|+||||..++.++.++ |+.+.+++.+++....
T Consensus 102 ~~~~~el~~~v~~~~~-~~~d~~~~~i~G~S~GG~~al~~~~~~-----P~~F~a~~~~sg~~~~ 160 (246)
T d3c8da2 102 LAVQQELLPLVKVIAP-FSDRADRTVVAGQSFGGLSALYAGLHW-----PERFGCVLSQSGSYWW 160 (246)
T ss_dssp HHHHHTHHHHHHHHSC-CCCCGGGCEEEEETHHHHHHHHHHHHC-----TTTCCEEEEESCCTTT
T ss_pred HHHHHHhhhHHHHhcc-cccCccceEEEecCchhHHHhhhhccC-----CchhcEEEcCCccccc
Confidence 3333555555544321 122235799999999999999999998 8999999999986543
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=97.52 E-value=5.1e-05 Score=70.33 Aligned_cols=93 Identities=15% Similarity=0.293 Sum_probs=56.7
Q ss_pred chhhHHHHHHhhhhc--CceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcE
Q 012210 169 QIRDLSQNLVNMIEE--GQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKL 246 (468)
Q Consensus 169 ~i~~~a~~la~~l~~--Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v 246 (468)
.++.+.+.+. .+ |+.|++.++..... .... .+ +..... +.+..+.+.|...... .+++
T Consensus 23 ~m~~l~~~l~---~~~pG~~V~~l~~g~~~~------~~~~-~~-----~~~~~~----~~~e~v~~~I~~~~~~-~~~v 82 (279)
T d1ei9a_ 23 SMGAIKKMVE---KKIPGIHVLSLEIGKTLR------EDVE-NS-----FFLNVN----SQVTTVCQILAKDPKL-QQGY 82 (279)
T ss_dssp TTHHHHHHHH---HHSTTCCEEECCCSSSHH------HHHH-HH-----HHSCHH----HHHHHHHHHHHSCGGG-TTCE
T ss_pred HHHHHHHHHH---HHCCCeEEEEEEcCCCcc------cccc-cc-----hhhhHH----HHHHHHHHHHHhcccc-ccce
Confidence 5677777776 44 89999877654321 0000 00 000122 3333444444432211 2489
Q ss_pred EEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccc
Q 012210 247 LAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 247 ~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
++|||||||.++-.++.+++ .++|..+|.+++|-.
T Consensus 83 ~lVGhSqGGLiaR~~i~~~~----~~~V~~lITLgsPH~ 117 (279)
T d1ei9a_ 83 NAMGFSQGGQFLRAVAQRCP----SPPMVNLISVGGQHQ 117 (279)
T ss_dssp EEEEETTHHHHHHHHHHHCC----SSCEEEEEEESCCTT
T ss_pred eEEEEccccHHHHHHHHHcC----CCCcceEEEECCCCC
Confidence 99999999999999999973 346999999988643
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Probab=97.48 E-value=0.00014 Score=66.21 Aligned_cols=51 Identities=14% Similarity=0.102 Sum_probs=38.2
Q ss_pred hHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccc
Q 012210 227 DVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASS 283 (468)
Q Consensus 227 D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~ 283 (468)
....++.++..+...+..++.++||||||.+++.++.+ ++.+.+++.++|.
T Consensus 124 ~~~~~~~~i~~~~~~d~~~~~i~G~S~GG~~a~~~~~~------~~~f~~~~a~s~~ 174 (265)
T d2gzsa1 124 LETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLS------SSYFRSYYSASPS 174 (265)
T ss_dssp HHHTHHHHHTTTSCEEEEEEEEEEETHHHHHHHHHHHH------CSSCSEEEEESGG
T ss_pred HHHHHHHHHHHhcCCCcCceEEEeccHHHHHHHHHHHc------CcccCEEEEECCc
Confidence 44456667766666554578999999999999987765 6778888777664
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.46 E-value=0.00016 Score=66.31 Aligned_cols=93 Identities=17% Similarity=0.275 Sum_probs=62.1
Q ss_pred HHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCCcEEEEEEe
Q 012210 173 LSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHS 252 (468)
Q Consensus 173 ~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~~v~lvGhS 252 (468)
+.+.++ ..++.|+.||--.. .|... +... ....+.+++.+++.. +|..+++.+.+++.+.|+|
T Consensus 51 ~~~~~~---~~~~iVV~p~g~~~--~~y~~---~~~~------~~~~~~tfl~~eL~~---~i~~~~~~d~~r~~i~G~S 113 (267)
T d1r88a_ 51 AMNTLA---GKGISVVAPAGGAY--SMYTN---WEQD------GSKQWDTFLSAELPD---WLAANRGLAPGGHAAVGAA 113 (267)
T ss_dssp HHHHHT---TSSSEEEEECCCTT--STTSB---CSSC------TTCBHHHHHHTHHHH---HHHHHSCCCSSCEEEEEET
T ss_pred HHHHHh---hCCeEEEEECCCCC--cCCcc---cccc------ccccHHHHHHHHHHH---HHHHhcCCCCCceEEEEEc
Confidence 445555 78999999874211 11100 0000 011344555455544 5656666666789999999
Q ss_pred hhHHHHHHHHHhcCCCCCcccccceeEEccccccC
Q 012210 253 MGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYT 287 (468)
Q Consensus 253 ~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~ 287 (468)
|||..++.+|.++ |+.+++++.+++.....
T Consensus 114 mGG~~Al~la~~~-----Pd~F~av~~~SG~~~~~ 143 (267)
T d1r88a_ 114 QGGYGAMALAAFH-----PDRFGFAGSMSGFLYPS 143 (267)
T ss_dssp HHHHHHHHHHHHC-----TTTEEEEEEESCCCCTT
T ss_pred chHHHHHHHHHhC-----cccccEEEEeCCccCCC
Confidence 9999999999998 99999999999876543
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.25 E-value=8.8e-05 Score=71.92 Aligned_cols=44 Identities=30% Similarity=0.361 Sum_probs=31.5
Q ss_pred CcEEEEEEehhHHHHHHHHHhcCC--------------------CCCcccccceeEEccccccC
Q 012210 244 GKLLAIGHSMGGILLYAMLSRCGF--------------------EGRESRLAAIVTLASSLDYT 287 (468)
Q Consensus 244 ~~v~lvGhS~GG~ia~~~a~~~~~--------------------~~~p~~V~~lVllap~~~~~ 287 (468)
.||+||||||||..+-.+++..+. .+....|++++.|++|-.-.
T Consensus 105 ~kVnLIgHS~GGld~Ryl~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~V~SvTTIsTPH~GS 168 (388)
T d1ku0a_ 105 GRVHIIAHSQGGQTARMLVSLLENGSQEEREYAKEHNVSLSPLFEGGHRFVLSVTTIATPHDGT 168 (388)
T ss_dssp CCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCEEEEEEESCCTTCC
T ss_pred CceeEeecccccHHHHHHHHHhccccccccccccccccccccccccCCcceEEEEeccCCCCCc
Confidence 389999999999999888765310 01123699999998765443
|
| >d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical esterase YJL068C domain: Hypothetical esterase YJL068C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.06 E-value=0.0048 Score=57.30 Aligned_cols=64 Identities=16% Similarity=0.226 Sum_probs=41.1
Q ss_pred ChhhHHhhhHHHHHHHHHhhcCC----CCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccc
Q 012210 219 DFDHYLEEDVPAAMEYIRAQSKP----KDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 219 ~~~~~~~~D~~a~i~~l~~~~~~----~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
.+.+++.++++..|+..-..... ..++..|.||||||.-|+.+|.++. .|.++.++..+++...
T Consensus 124 ~~~~~i~~EL~p~i~~~~~~~~~r~~~~~~~~~I~G~SmGG~gAl~~al~~~---~p~~f~~~~s~s~~~~ 191 (299)
T d1pv1a_ 124 QMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAICGYLKGY---SGKRYKSCSAFAPIVN 191 (299)
T ss_dssp BHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEETHHHHHHHHHHHHTG---GGTCCSEEEEESCCCC
T ss_pred chHHHHHHHHHHHHHHhCCcccccccccccceEEEeecccHHHHHHHHHHhc---CCCceEEEeeccCcCC
Confidence 34566656666666654321110 1136899999999999999998631 1677777777776544
|
| >d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Dog (Canis familiaris) [TaxId: 9615]
Probab=97.04 E-value=0.00052 Score=64.95 Aligned_cols=112 Identities=13% Similarity=0.026 Sum_probs=69.1
Q ss_pred cccccccccc--ccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHH
Q 012210 155 SSLLERRQSS--AIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAM 232 (468)
Q Consensus 155 ~~ll~~~~~~--G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i 232 (468)
+.++-.|++. +-...+.++.+.+. ...++.||+.|....... .+.... .+..... +.+..+|
T Consensus 71 pt~iiiHGw~~~~~~~~~~~~~~a~l--~~~d~NVI~VDW~~~a~~-----------~Y~~a~--~n~~~Vg-~~ia~~i 134 (337)
T d1rp1a2 71 KTRFIIHGFIDKGEENWLLDMCKNMF--KVEEVNCICVDWKKGSQT-----------SYTQAA--NNVRVVG-AQVAQML 134 (337)
T ss_dssp EEEEEECCCCCTTCTTHHHHHHHHHT--TTCCEEEEEEECHHHHSS-----------CHHHHH--HHHHHHH-HHHHHHH
T ss_pred CEEEEeCCCcCCCCcchHHHHHHHHH--hcCCceEEEEeeccccCc-----------chHHHH--HHHHHHH-HHHHHHH
Confidence 3344444443 33344555555443 145599999777443210 000000 0122333 7788888
Q ss_pred HHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCC
Q 012210 233 EYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTS 288 (468)
Q Consensus 233 ~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~ 288 (468)
+.|....+...+++++||||+|+.+|-..+.+ ..++.+++.+.|+.+...
T Consensus 135 ~~l~~~~g~~~~~vhlIGhSLGAhvAG~aG~~------~~~l~rItgLDPA~P~F~ 184 (337)
T d1rp1a2 135 SMLSANYSYSPSQVQLIGHSLGAHVAGEAGSR------TPGLGRITGLDPVEASFQ 184 (337)
T ss_dssp HHHHHHHCCCGGGEEEEEETHHHHHHHHHHHT------STTCCEEEEESCCCTTTT
T ss_pred HHHHHhcCCChhheEEEeecHHHhhhHHHHHh------hccccceeccCCCccccC
Confidence 88887777666799999999999999755544 457999999998776543
|
| >d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.94 E-value=0.00077 Score=63.65 Aligned_cols=103 Identities=12% Similarity=0.055 Sum_probs=67.8
Q ss_pred ccccchhhHHHHHHhhhhcCceEeccCccccccCCccchHHHhhcccceEeecCChhhHHhhhHHHHHHHHHhhcCCCCC
Q 012210 165 AIAIQIRDLSQNLVNMIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDG 244 (468)
Q Consensus 165 G~~~~i~~~a~~la~~l~~Gy~viapdl~~~~~~~~~~~~~l~~~~~~~~~~D~~~~~~~~~D~~a~i~~l~~~~~~~~~ 244 (468)
+-...+.++.+.+. ....+.||+.|.-..... . +. .... +..... +.+..+|+.|....+...+
T Consensus 83 ~~~~~~~~~~~a~l--~~~d~NVi~VDW~~~a~~-~----Y~------~a~~--n~~~Vg-~~ia~~i~~l~~~~g~~~~ 146 (338)
T d1bu8a2 83 GEDGWLLDMCKKMF--QVEKVNCICVDWRRGSRT-E----YT------QASY--NTRVVG-AEIAFLVQVLSTEMGYSPE 146 (338)
T ss_dssp TCTTHHHHHHHHHH--TTCCEEEEEEECHHHHSS-C----HH------HHHH--HHHHHH-HHHHHHHHHHHHHHCCCGG
T ss_pred CCcccHHHHHHHHH--hcCCceEEEEechhhccc-c----hH------HHHH--hHHHHH-HHHHHHHHHHHHhcCCCcc
Confidence 33455566655544 135589998776443210 0 00 0000 123333 6777888888777666667
Q ss_pred cEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccCC
Q 012210 245 KLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTS 288 (468)
Q Consensus 245 ~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~~ 288 (468)
++++||||+|+.+|-..+.+. ..+|.+++.+.|+.+...
T Consensus 147 ~vhlIGhSLGAhiaG~ag~~l-----~~kigrItgLDPA~P~F~ 185 (338)
T d1bu8a2 147 NVHLIGHSLGAHVVGEAGRRL-----EGHVGRITGLDPAEPCFQ 185 (338)
T ss_dssp GEEEEEETHHHHHHHHHHHHT-----TTCSSEEEEESCBCTTTT
T ss_pred eeEEEeccHHHHHHHHHHHhh-----ccccccccccccCcCccc
Confidence 999999999999999988775 567999999998776543
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Probab=95.87 E-value=0.0011 Score=60.01 Aligned_cols=39 Identities=21% Similarity=0.294 Sum_probs=34.4
Q ss_pred CcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccccC
Q 012210 244 GKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYT 287 (468)
Q Consensus 244 ~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~~~ 287 (468)
+++++.|+||||.+++.+|.++ |+.+.+++.+++.....
T Consensus 144 ~~~~i~G~S~GG~~a~~~a~~~-----pd~f~a~~~~sg~~~~~ 182 (273)
T d1wb4a1 144 MHRGFGGFAMGGLTTWYVMVNC-----LDYVAYFMPLSGDYWYG 182 (273)
T ss_dssp GGEEEEEETHHHHHHHHHHHHH-----TTTCCEEEEESCCCCBS
T ss_pred cceEEEeeCCcchhhhhhhhcC-----CCcceEEEEeCcccccC
Confidence 4899999999999999999998 99999999998866543
|
| >d1tiba_ c.69.1.17 (A:) Triacylglycerol lipase {Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]
Probab=95.39 E-value=0.012 Score=53.50 Aligned_cols=53 Identities=13% Similarity=0.188 Sum_probs=36.4
Q ss_pred hhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccc
Q 012210 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASS 283 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~ 283 (468)
+++...++.+....+.. ++.+.|||+||.+|..++...... ..++. ++.+++|
T Consensus 122 ~~v~~~v~~~~~~~~~~--~i~vtGHSLGGalA~l~a~~l~~~--~~~i~-~~tFG~P 174 (269)
T d1tiba_ 122 DTLRQKVEDAVREHPDY--RVVFTGHSLGGALATVAGADLRGN--GYDID-VFSYGAP 174 (269)
T ss_dssp HHHHHHHHHHHHHCTTS--EEEEEEETHHHHHHHHHHHHHTTS--SSCEE-EEEESCC
T ss_pred HHHHHHHHHHHHhCCCc--ceeeeccchHHHHHHHHHHHHHhc--cCcce-EEEecCC
Confidence 66677777666665544 999999999999999999865221 23343 4555543
|
| >d1uwca_ c.69.1.17 (A:) Feruloyl esterase A {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Feruloyl esterase A species: Aspergillus niger [TaxId: 5061]
Probab=95.33 E-value=0.011 Score=53.57 Aligned_cols=53 Identities=15% Similarity=0.192 Sum_probs=37.0
Q ss_pred hhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccc
Q 012210 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASS 283 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~ 283 (468)
.++...++.+..+.+.. ++.+.|||+||.+|..++..... ..+.+. ++.+++|
T Consensus 109 ~~i~~~i~~~~~~~~~~--~i~vTGHSLGGAlA~L~a~~l~~--~~~~~~-~~tFG~P 161 (261)
T d1uwca_ 109 DQVESLVKQQASQYPDY--ALTVTGHSLGASMAALTAAQLSA--TYDNVR-LYTFGEP 161 (261)
T ss_dssp HHHHHHHHHHHHHSTTS--EEEEEEETHHHHHHHHHHHHHHT--TCSSEE-EEEESCC
T ss_pred HHHHHHHHHHHhhCCCc--ceEEeccchhHHHHHHHHHHHHh--cCCCcc-eEEecCc
Confidence 66777777777766544 89999999999999988876521 133443 5555543
|
| >d1tiaa_ c.69.1.17 (A:) Triacylglycerol lipase {Penicillium camembertii [TaxId: 5075]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Penicillium camembertii [TaxId: 5075]
Probab=95.18 E-value=0.01 Score=54.13 Aligned_cols=38 Identities=21% Similarity=0.367 Sum_probs=30.0
Q ss_pred hhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhc
Q 012210 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRC 265 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~ 265 (468)
.++...++.+....+.. ++.+.|||+||.+|..++...
T Consensus 121 ~~i~~~i~~~~~~~~~~--~i~iTGHSLGGAlA~L~a~~l 158 (271)
T d1tiaa_ 121 DDIIKELKEVVAQNPNY--ELVVVGHSLGAAVATLAATDL 158 (271)
T ss_pred HHHHHHHHHHHHhCCCc--eEEEeccchHHHHHHHHHHHH
Confidence 66667777666665444 899999999999999888764
|
| >d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus [TaxId: 4844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizopus niveus [TaxId: 4844]
Probab=94.00 E-value=0.031 Score=50.64 Aligned_cols=38 Identities=18% Similarity=0.179 Sum_probs=29.5
Q ss_pred hhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhc
Q 012210 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRC 265 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~ 265 (468)
.++...++.+....+.. ++.+.|||+||.+|..+|...
T Consensus 117 ~~i~~~v~~~~~~~~~~--~i~vtGHSLGGAlA~L~a~~l 154 (265)
T d1lgya_ 117 NDYFPVVQEQLTAHPTY--KVIVTGHSLGGAQALLAGMDL 154 (265)
T ss_dssp HHHHHHHHHHHHHCTTC--EEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCc--eEEEEecccchHHHHHHHHHH
Confidence 66666677666655544 999999999999999888753
|
| >d3tgla_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizomucor miehei [TaxId: 4839]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizomucor miehei [TaxId: 4839]
Probab=93.66 E-value=0.038 Score=50.00 Aligned_cols=37 Identities=22% Similarity=0.215 Sum_probs=28.9
Q ss_pred hhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHh
Q 012210 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSR 264 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~ 264 (468)
.++...+..+..+.+.. ++.+.|||+||.+|..+|..
T Consensus 116 ~~i~~~i~~~~~~~~~~--~i~vtGHSLGGAlA~L~a~~ 152 (265)
T d3tgla_ 116 NELVATVLDQFKQYPSY--KVAVTGHSLGGATVLLCALD 152 (265)
T ss_dssp HHHHHHHHHHHHHCTTS--EEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCc--eEEEecccchHHHHHHHHHH
Confidence 56666666666665544 99999999999999988865
|
| >d1cexa_ c.69.1.30 (A:) Cutinase {Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Cutinase species: Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]
Probab=90.59 E-value=0.21 Score=42.68 Aligned_cols=57 Identities=16% Similarity=0.156 Sum_probs=42.4
Q ss_pred hhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcccc
Q 012210 225 EEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSL 284 (468)
Q Consensus 225 ~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~ 284 (468)
..++...+.....+.+.. |++|+|+|+|+.++-..+...+. ...++|.++|+++-|.
T Consensus 79 ~~~~~~~i~~~a~~CP~t--kiVL~GYSQGA~V~~~~~~~l~~-~~~~~V~avvlfGDP~ 135 (197)
T d1cexa_ 79 IREMLGLFQQANTKCPDA--TLIAGGYSQGAALAAASIEDLDS-AIRDKIAGTVLFGYTK 135 (197)
T ss_dssp HHHHHHHHHHHHHHCTTC--EEEEEEETHHHHHHHHHHHHSCH-HHHTTEEEEEEESCTT
T ss_pred HHHHHHHHHHHHhhCCCC--eEEEeeeccccHhhhcccccCCh-hhhhhEEEEEEEeCCC
Confidence 367777788777776655 99999999999999888875310 0135789999987643
|
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=87.30 E-value=0.52 Score=44.88 Aligned_cols=62 Identities=27% Similarity=0.457 Sum_probs=50.3
Q ss_pred CccEEEEecCCCCcCCHHHHHHHHHhCCC-----------------------------CceeEEEecCCCCCCCCccccc
Q 012210 394 NIPILAIAGDQDLICPPEAVEETVKLLPE-----------------------------DLVTYKVFGEPSGPHYAHYDLV 444 (468)
Q Consensus 394 ~vPvLiI~G~~D~ivp~~~~~~l~~~ip~-----------------------------~~~~~~v~~~~~agH~~H~e~~ 444 (468)
.++|||..|+.|.+||....+.+.+.++- .+.+++.+ .++||....+
T Consensus 327 ~irVLIysGd~D~~~p~~Gte~~i~~L~w~~~~~f~~~~~~~w~~~~~~~~aG~~~~~~nltf~~V--~~AGHmvP~d-- 402 (421)
T d1wpxa1 327 DLPILVYAGDKDFICNWLGNKAWTDVLPWKYDEEFASQKVRNWTASITDEVAGEVKSYKHFTYLRV--FNGGHMVPFD-- 402 (421)
T ss_dssp TCCEEEEEETTCSTTCHHHHHHHHHHCCSTTHHHHHHSCCEEEECTTTCSEEEEEEEETTEEEEEE--TTCCSSHHHH--
T ss_pred CCeEEEEeCCcCccCCchhHHHHHHhCCCCcccchhcCcccceeecCCCeEEEEEEEECCeEEEEE--CCccccCccc--
Confidence 57999999999999999988888777641 01244455 7899999887
Q ss_pred ccccchhhHHHHHHHHHhh
Q 012210 445 GGRMAVEQVYPCIVQFLGR 463 (468)
Q Consensus 445 ~~~~~pe~v~~~I~~FL~~ 463 (468)
+|+...+.+.+||.-
T Consensus 403 ----~P~~a~~m~~~fi~G 417 (421)
T d1wpxa1 403 ----VPENALSMVNEWIHG 417 (421)
T ss_dssp ----CHHHHHHHHHHHHTT
T ss_pred ----CHHHHHHHHHHHhcC
Confidence 999999999999963
|
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.78 E-value=0.6 Score=44.65 Aligned_cols=63 Identities=21% Similarity=0.287 Sum_probs=51.3
Q ss_pred CccEEEEecCCCCcCCHHHHHHHHHhCCCC---------------------------ceeEEEecCCCCCCCCccccccc
Q 012210 394 NIPILAIAGDQDLICPPEAVEETVKLLPED---------------------------LVTYKVFGEPSGPHYAHYDLVGG 446 (468)
Q Consensus 394 ~vPvLiI~G~~D~ivp~~~~~~l~~~ip~~---------------------------~~~~~v~~~~~agH~~H~e~~~~ 446 (468)
.++|||.+|..|.+||.-..+.+.+.+.-. +.+++.+ .++||....+
T Consensus 361 ~~rVliy~Gd~D~~~~~~gte~~i~~l~~~~~~~~~~~~~~~~~~~~~v~G~v~~~~nltf~~V--~~AGHmVP~d---- 434 (452)
T d1ivya_ 361 KYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTI--KGAGHMVPTD---- 434 (452)
T ss_dssp CCEEEEEEETTCSSSCHHHHHHHHHHTCCCEEEEEEEEEEECTTSCEEEEEEEEEESSEEEEEE--TTCCSSHHHH----
T ss_pred CCEEEEEeCCcceeCCCHHHHHHHHhcCCccccccccceecccCCCCEEEEEEEEECCeEEEEE--CCccccCccc----
Confidence 589999999999999999999888887532 1223444 6899999887
Q ss_pred ccchhhHHHHHHHHHhhc
Q 012210 447 RMAVEQVYPCIVQFLGRY 464 (468)
Q Consensus 447 ~~~pe~v~~~I~~FL~~~ 464 (468)
+|+...+.+.+||...
T Consensus 435 --qP~~a~~m~~~fi~g~ 450 (452)
T d1ivya_ 435 --KPLAAFTMFSRFLNKQ 450 (452)
T ss_dssp --CHHHHHHHHHHHHTTC
T ss_pred --CHHHHHHHHHHHHcCC
Confidence 9999999999999753
|
| >d1qoza_ c.69.1.30 (A:) Acetylxylan esterase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Trichoderma reesei [TaxId: 51453]
Probab=86.47 E-value=0.45 Score=40.81 Aligned_cols=58 Identities=17% Similarity=0.195 Sum_probs=39.8
Q ss_pred hhhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCC---------CC----cccccceeEEcccc
Q 012210 225 EEDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFE---------GR----ESRLAAIVTLASSL 284 (468)
Q Consensus 225 ~~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~---------~~----p~~V~~lVllap~~ 284 (468)
..++...|.....+.+.. |++|+|+|+|+.++-..+...+.. .. .++|.++++++-+.
T Consensus 65 ~~~~~~~i~~~~~~CP~t--kivl~GYSQGA~V~~~~l~~~g~~~~~~~~~~~~l~~~~~~~V~avvl~GdP~ 135 (207)
T d1qoza_ 65 TNAAAAAINNFHNSCPDT--QLVLVGYSQGAQIFDNALCGGGDPGEGITNTAVPLTAGAVSAVKAAIFMGDPR 135 (207)
T ss_dssp HHHHHHHHHHHHHHCTTS--EEEEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCTT
T ss_pred HHHHHHHHHHHHHhCCCC--eEEEEeeccchHHHHHHHhccCccccccccCCCCCChhhhhcEEEEEEEeCCC
Confidence 366777777777776554 999999999999998887531000 00 13688888887544
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=85.84 E-value=0.4 Score=46.70 Aligned_cols=64 Identities=23% Similarity=0.348 Sum_probs=52.7
Q ss_pred CccEEEEecCCCCcCCHHHHHHHHHhCC--------CC---------------------------ceeEEEecCCCCCCC
Q 012210 394 NIPILAIAGDQDLICPPEAVEETVKLLP--------ED---------------------------LVTYKVFGEPSGPHY 438 (468)
Q Consensus 394 ~vPvLiI~G~~D~ivp~~~~~~l~~~ip--------~~---------------------------~~~~~v~~~~~agH~ 438 (468)
.++|||..|+.|.+||.-..+.+.+.++ .. +.+++.+ .++||.
T Consensus 372 girVLIy~Gd~D~icn~~Gte~~i~~L~w~g~~~f~~~~~~~~w~~~~~~~~~~~~vaG~~~~~~nltf~~V--~~AGHm 449 (483)
T d1ac5a_ 372 GIEIVLFNGDKDLICNNKGVLDTIDNLKWGGIKGFSDDAVSFDWIHKSKSTDDSEEFSGYVKYDRNLTFVSV--YNASHM 449 (483)
T ss_dssp TCEEEEEEETTCSTTCHHHHHHHHHHCEETTEESSCTTCEEEEEEECSSTTCCCCSCCEEEEEETTEEEEEE--TTCCSS
T ss_pred CCEEEEEECChhhcCCCHHHHHHHHhCCCccccccccCccccccccccccccCCcEEEEEEEEeCCeEEEEE--CCcccc
Confidence 5799999999999999998888887763 10 2355555 799999
Q ss_pred CcccccccccchhhHHHHHHHHHhhcc
Q 012210 439 AHYDLVGGRMAVEQVYPCIVQFLGRYD 465 (468)
Q Consensus 439 ~H~e~~~~~~~pe~v~~~I~~FL~~~~ 465 (468)
...+ +|+...+.|..||.+.+
T Consensus 450 vP~d------qP~~a~~mi~~fl~~~~ 470 (483)
T d1ac5a_ 450 VPFD------KSLVSRGIVDIYSNDVM 470 (483)
T ss_dssp HHHH------CHHHHHHHHHHHTTCCE
T ss_pred Cccc------CHHHHHHHHHHHhCCcc
Confidence 9988 99999999999998754
|
| >d1g66a_ c.69.1.30 (A:) Acetylxylan esterase {Penicillium purpurogenum [TaxId: 28575]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Penicillium purpurogenum [TaxId: 28575]
Probab=85.59 E-value=0.54 Score=40.29 Aligned_cols=57 Identities=19% Similarity=0.293 Sum_probs=39.0
Q ss_pred hhHHHHHHHHHhhcCCCCCcEEEEEEehhHHHHHHHHHhcCCC---------C----CcccccceeEEcccc
Q 012210 226 EDVPAAMEYIRAQSKPKDGKLLAIGHSMGGILLYAMLSRCGFE---------G----RESRLAAIVTLASSL 284 (468)
Q Consensus 226 ~D~~a~i~~l~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~~~~---------~----~p~~V~~lVllap~~ 284 (468)
.++...|.....+.+.. |+.|+|+|+|+.++-.++...+.. . ..++|.++++++.+.
T Consensus 66 ~~~~~~i~~~~~~CP~t--k~vl~GYSQGA~V~~~~l~~~g~~~~~~~~~~~~l~~~~~~~v~avvl~GdP~ 135 (207)
T d1g66a_ 66 AAVASAVNSFNSQCPST--KIVLVGYSQGGEIMDVALCGGGDPNQGYTNTAVQLSSSAVNMVKAAIFMGDPM 135 (207)
T ss_dssp HHHHHHHHHHHHHSTTC--EEEEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCTT
T ss_pred HHHHHHHHHHHHhCCCC--cEEEEeeccccHHHHHHHhccCCccccccccccCCCchhhhceeeEEEecCCC
Confidence 56677777777776655 999999999999998877531100 0 023677888887653
|
| >d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Thermophilic para-nitrobenzyl esterase (PNB esterase) species: Bacillus subtilis [TaxId: 1423]
Probab=85.17 E-value=0.27 Score=47.71 Aligned_cols=61 Identities=16% Similarity=0.231 Sum_probs=46.6
Q ss_pred hHHhhhHHHHHHHHHhhc---CCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccccc
Q 012210 222 HYLEEDVPAAMEYIRAQS---KPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLD 285 (468)
Q Consensus 222 ~~~~~D~~a~i~~l~~~~---~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~~ 285 (468)
.+...|...+++++++.. +.+.++|+|+|||-||..+..++.... ...-+.++|+.+++..
T Consensus 155 N~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~---~~gLF~raI~~SGs~~ 218 (483)
T d1qe3a_ 155 NLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPA---AKGLFQKAIMESGASR 218 (483)
T ss_dssp CHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGG---GTTSCSEEEEESCCCC
T ss_pred ccccHHHHHHHHHHHHHHHHcCCCcccceeeccccccchhhhhhcccc---cCCcceeeccccCCcc
Confidence 455699999999999864 445568999999999999988876521 1346888898887543
|
| >d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]
Probab=82.93 E-value=0.58 Score=46.10 Aligned_cols=62 Identities=13% Similarity=0.179 Sum_probs=44.0
Q ss_pred hHHhhhHHHHHHHHHhhc---CCCCCcEEEEEEehhHHHHHHHHHhcCCCC---CcccccceeEEccc
Q 012210 222 HYLEEDVPAAMEYIRAQS---KPKDGKLLAIGHSMGGILLYAMLSRCGFEG---RESRLAAIVTLASS 283 (468)
Q Consensus 222 ~~~~~D~~a~i~~l~~~~---~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~---~p~~V~~lVllap~ 283 (468)
.+...|...+++++++.. +.+.++|.|+|||-||..+..++....... ...-+.++|+.++.
T Consensus 184 N~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~sp~~~~~~~s~gLF~raI~qSG~ 251 (544)
T d1thga_ 184 NAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGG 251 (544)
T ss_dssp THHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCC
T ss_pred cHHHHHhhhhhhhhhhhhcccccCCCceEeeeeccchHHHHHHHhCcCCCcccchhhhhccccccccc
Confidence 455699999999999864 445568999999999988776665421000 12368888888764
|
| >d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Mammalian carboxylesterase (liver carboxylesterase I) species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.63 E-value=0.66 Score=45.27 Aligned_cols=59 Identities=14% Similarity=0.189 Sum_probs=44.4
Q ss_pred hHHhhhHHHHHHHHHhhc---CCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEccc
Q 012210 222 HYLEEDVPAAMEYIRAQS---KPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASS 283 (468)
Q Consensus 222 ~~~~~D~~a~i~~l~~~~---~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~ 283 (468)
.+...|...+++++++.. +.+.++|.|+|||-||..+..++.... ...-+.++|+.++.
T Consensus 168 N~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~---~~~LF~raI~~SG~ 229 (532)
T d2h7ca1 168 NWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPL---AKNLFHRAISESGV 229 (532)
T ss_dssp CHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGG---GTTSCSEEEEESCC
T ss_pred ccccHHHHHHHHHHHHHHHHhcCCcceeeeeccccccchHHHHHhhhh---ccCcchhhhhhccc
Confidence 345689999999999864 445568999999999999887776521 13457788888754
|
| >d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Butyryl cholinesterase species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.46 E-value=0.72 Score=45.01 Aligned_cols=60 Identities=15% Similarity=0.141 Sum_probs=44.3
Q ss_pred hHHhhhHHHHHHHHHhhc---CCCCCcEEEEEEehhHHHHHHHHHhcCCCCCcccccceeEEcccc
Q 012210 222 HYLEEDVPAAMEYIRAQS---KPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSL 284 (468)
Q Consensus 222 ~~~~~D~~a~i~~l~~~~---~~~~~~v~lvGhS~GG~ia~~~a~~~~~~~~p~~V~~lVllap~~ 284 (468)
.+...|...+++++++.. +.+..+|.|+|+|-||..+..++.... ....+.++|+.+++.
T Consensus 162 N~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~---~~~lf~~aI~~Sg~~ 224 (526)
T d1p0ia_ 162 NMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPG---SHSLFTRAILQSGSF 224 (526)
T ss_dssp CHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGG---GGGGCSEEEEESCCT
T ss_pred cccccchhhhhhhHHHHHHHhhcCchheeehhhccccceeeccccCCc---chhhhhhhhcccccc
Confidence 345589999999998764 445569999999999999876665421 134677888876544
|