Citrus Sinensis ID: 012274

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------
MQLLEPHLMKAKLAIQSITKFNSLSISSREQMAIEDCKELLDFSVSELAWSLDEMKRIRAGDKNVHYEGNLKAWLSAALSNQDTCLEGFEGTDRRLENFINGSLQQVTQLITNVLSLYTQLHSLPFKPPRINDTQSESPKFPKWMTEGDKGLMDMKPTRMHADAVVALDGTGHYRTITEAINAAPSYSKRRYVIYVKKGVYRENVDMKKKKTNIMLVGDGIGATVVTGNRNFMQGWTTFRTATVAVSGKGFIARDMTFRNTAGPQNHQAVALRVDSDQSAFFRCSVEGYQDTLYAHSLRQFYRECNIYGTIDFIFGNGAAVLQNCKIYSRVPLPLQKVTITAQGRKNPNQNTGFSIQDSYVVATQPTYLGRPWKQYSRTVYMNTYMSGLVQPRGWLEWYGNFALNTLWYGEYRNYGPGASLNGRVKWPGYHIIRDASAARYFTAGRFIDGMAWLPGTGIRFTAGLGT
cccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccHHHHHHHcccccccCEEEEEEccEEEEEEEEccccccEEEEEccccccEEEEccccccccccccEEEEEEECccCEEEccEEEEccccccccEEEEEEcccCEEEEccEEEccccccccccccEEEEccEEEEcccEEEcccEEEEEccEEEECccccccccEEEcccccccccccEEEEEccEEEEccccccccccccccEEEEEEcccccccccccccccccccccccCEEEEEcccccccccccccccccccccccHHHHHccccccccccccccccccccccccccc
*Q*LEPHLMKAKLAIQSITKFNSLSIS*REQMAIEDCKELLDFSVSELAWSLDEMKRIRAGDKNVHYEGNLKAWLSAALSNQDTCLEGFEGTDRRLENFINGSLQQVTQLITNVLSLYTQLHSLP*******************MTE*********PTRMHADAVVALDGTGHYRTITEAINAAPSYSKRRYVIYVKKGVYRENVDMKKKKTNIMLVGDGIGATVVTGNRNFMQGWTTFRTATVAVSGKGFIARDMTFRNTAGPQNHQAVALRVDSDQSAFFRCSVEGYQDTLYAHSLRQFYRECNIYGTIDFIFGNGAAVLQNCKIYSRVPLPLQKVTITAQGRKNPNQNTGFSIQDSYVVATQPTYLGRPWKQYSRTVYMNTYMSGLVQPRGWLEWYGNFALNTLWYGEYRNYGPGASLNGRVKWPGYHIIRDASAARYFTAGRFIDGMAWLPGTGIRFTAGLG*
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MQLLEPHLMKAKLAIQSITKFNSLSISSREQMAIEDCKELLDFSVSELAWSLDEMKRIRAGDKNVHYEGNLKAWLSAALSNQDTCLEGFEGTDRRLENFINGSLQQVTQLITNVLSLYTQLHSLPFKPPRINDTQSESPKFPKWMTEGDKGLMDMKPTRMHADAVVALDGTGHYRTITEAINAAPSYSKRRYVIYVKKGVYRENVDMKKKKTNIMLVGDGIGATVVTGNRNFMQGWTTFRTATVAVSGKGFIARDMTFRNTAGPQNHQAVALRVDSDQSAFFRCSVEGYQDTLYAHSLRQFYRECNIYGTIDFIFGNGAAVLQNCKIYSRVPLPLQKVTITAQGRKNPNQNTGFSIQDSYVVATQPTYLGRPWKQYSRTVYMNTYMSGLVQPRGWLEWYGNFALNTLWYGEYRNYGPGASLNGRVKWPGYHIIRDASAARYFTAGRFIDGMAWLPGTGIRFTAGLGT

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Putative pectinesterase/pectinesterase inhibitor 22 Acts in the modification of cell walls via demethylesterification of cell wall pectin.confidentQ9M9W7
Pectinesterase/pectinesterase inhibitor PPE8B May have roles in the deposition of pectin in developing tissues and in the wall loosening and cell separation that occurs in cell expansion, fruit ripening and abscission.probableQ43062

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
3.-.-.-Hydrolases.probable
3.1.-.-Acting on ester bonds.probable
3.1.1.-Carboxylic ester hydrolases.probable
3.1.1.11Pectinesterase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1GQ8, chain A
Confidence level:very confident
Coverage over the Query: 160-465
View the alignment between query and template
View the model in PyMOL
Template: 1X91, chain A
Confidence level:confident
Coverage over the Query: 2-122
View the alignment between query and template
View the model in PyMOL