Citrus Sinensis ID: 012311
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 466 | 2.2.26 [Sep-21-2011] | |||||||
| Q949Y3 | 475 | Bifunctional purple acid | yes | no | 0.989 | 0.970 | 0.771 | 0.0 | |
| Q93WP4 | 481 | Phosphoenolpyruvate phosp | N/A | no | 0.931 | 0.902 | 0.715 | 0.0 | |
| Q9SDZ9 | 465 | Purple acid phosphatase 2 | N/A | no | 0.918 | 0.920 | 0.567 | 1e-147 | |
| Q38924 | 469 | Fe(3+)-Zn(2+) purple acid | no | no | 0.935 | 0.929 | 0.573 | 1e-147 | |
| Q9SE00 | 473 | Purple acid phosphatase 1 | N/A | no | 0.944 | 0.930 | 0.557 | 1e-146 | |
| Q09131 | 464 | Purple acid phosphatase O | no | no | 0.896 | 0.900 | 0.578 | 1e-143 | |
| Q9SIV9 | 468 | Purple acid phosphatase 1 | no | no | 0.924 | 0.920 | 0.545 | 1e-140 | |
| Q9C510 | 466 | Purple acid phosphatase 6 | no | no | 0.912 | 0.912 | 0.542 | 1e-136 | |
| O23244 | 466 | Purple acid phosphatase 2 | no | no | 0.927 | 0.927 | 0.545 | 1e-135 | |
| P80366 | 432 | Fe(3+)-Zn(2+) purple acid | N/A | no | 0.879 | 0.949 | 0.544 | 1e-132 |
| >sp|Q949Y3|PPA26_ARATH Bifunctional purple acid phosphatase 26 OS=Arabidopsis thaliana GN=PAP26 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 767 bits (1980), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/476 (77%), Positives = 408/476 (85%), Gaps = 15/476 (3%)
Query: 4 MRLLLHLALTTAIVLLSDVNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVH 63
M L+ +++ + VLL + G +GITS FIR+EWP++DIPLD+ F VPKG+N+PQQVH
Sbjct: 1 MNHLVIISVFLSSVLL--LYRGESGITSSFIRSEWPAVDIPLDHHVFKVPKGYNAPQQVH 58
Query: 64 ITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCL 123
ITQGDYDGKAVIISWVTP EPG S V YG K++F A+GT +NYTFYKYKSG+IH CL
Sbjct: 59 ITQGDYDGKAVIISWVTPDEPGSSQVHYGAVQGKYEFVAQGTYHNYTFYKYKSGFIHHCL 118
Query: 124 VDGLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYME 183
V LE+DTKYYYKI SG+SSREFWF TPP + PDASYKFGIIGD+GQT+NSLSTLEHYME
Sbjct: 119 VSDLEHDTKYYYKIESGESSREFWFVTPPHVHPDASYKFGIIGDMGQTFNSLSTLEHYME 178
Query: 184 SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGE 243
SGAQ VLFLGDLSYADRYQ+ DVGVRWDSWGRFVERS AYQPW+WSAGNHE++YM YMGE
Sbjct: 179 SGAQAVLFLGDLSYADRYQYNDVGVRWDSWGRFVERSTAYQPWLWSAGNHEVDYMPYMGE 238
Query: 244 VVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKK 303
V PF++YL RY TP+LASKSSSPLWYA+RRASAHIIVLSSYSPFVKYTPQW WL EEL +
Sbjct: 239 VTPFRNYLQRYTTPYLASKSSSPLWYAVRRASAHIIVLSSYSPFVKYTPQWHWLSEELTR 298
Query: 304 VDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVD-------------YR 350
VDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFE WFV++KVD YR
Sbjct: 299 VDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFEEWFVQHKVDVIFAGHVHAYERSYR 358
Query: 351 ISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTL 410
ISN+ YN+SSGD +PVPDKSAPVYITVGDGGNQEGLAG+F PQPDYSAFREASYGHSTL
Sbjct: 359 ISNVRYNVSSGDRYPVPDKSAPVYITVGDGGNQEGLAGRFTEPQPDYSAFREASYGHSTL 418
Query: 411 EIKNRTHAFYHWNRNDDGKKVATDSFILHNQYWASNRRRRKLNKHYLRSVVGGLFA 466
+IKNRTHA YHWNRNDDGKKVATD F+LHNQYW N RRRKL KHY+RSVVGG A
Sbjct: 419 DIKNRTHAIYHWNRNDDGKKVATDEFVLHNQYWGKNIRRRKLKKHYIRSVVGGWIA 474
|
Metallo-phosphoesterase involved in phosphate metabolism. Acid phosphatase activity with phosphoenolpyruvate, inorganic pyrophosphate, phenyl-phosphate and p-nitrophenyl-phosphate as the most effective substrates. No activity with phytic acid, phosphocholine or bis-p-nitrophenyl-phosphate. Has a peroxidase activity at alkaline pH. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 7 |
| >sp|Q93WP4|PEPP_ALLCE Phosphoenolpyruvate phosphatase OS=Allium cepa GN=ACPEPP PE=1 SV=1 | Back alignment and function description |
|---|
Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/454 (71%), Positives = 369/454 (81%), Gaps = 20/454 (4%)
Query: 6 LLLHLALTTAIVLLSDVNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVHIT 65
LL H I+LL V+ TS F+R+E+P++DIP+D++ FAVPK SPQQVHIT
Sbjct: 13 LLFH------IILLCSVDKTLCRQTSSFVRSEFPAVDIPIDSKEFAVPKNQFSPQQVHIT 66
Query: 66 QGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVD 125
QGDYDGKAVI+SWVT +PG S V YGTS + +D +A+G NYT+Y Y SGYIH CL+D
Sbjct: 67 QGDYDGKAVIVSWVTFIDPGKSEVVYGTSPNSYDHSAQGKTTNYTYYDYTSGYIHHCLLD 126
Query: 126 GLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYMESG 185
LEYDTKYYYKIG GD++REFWF TPP+I PDASY FGIIGDLGQTYNSLSTLEHYM+S
Sbjct: 127 KLEYDTKYYYKIGKGDAAREFWFHTPPQIHPDASYTFGIIGDLGQTYNSLSTLEHYMKSK 186
Query: 186 AQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVV 245
QTVLF+GDLSYADRY + G RWDSWGRFVERS AYQPWIW+ GNHEIEY +GEV
Sbjct: 187 GQTVLFVGDLSYADRYS-CNNGTRWDSWGRFVERSVAYQPWIWTVGNHEIEYRPDLGEVF 245
Query: 246 PFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVD 305
PF++YL+RYPTPHLAS SSSPLWY+IRRASAHIIVLSSYSPFVKYTPQW WL EEL +VD
Sbjct: 246 PFRAYLNRYPTPHLASASSSPLWYSIRRASAHIIVLSSYSPFVKYTPQWLWLSEELTRVD 305
Query: 306 REKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVD-------------YRIS 352
REKTPWLIVLMH P+YNSNEAH+MEGESMR AFESWFV+YKVD YRIS
Sbjct: 306 REKTPWLIVLMHAPLYNSNEAHYMEGESMRVAFESWFVQYKVDLVFAGHVHAYERSYRIS 365
Query: 353 NLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEI 412
N+ YNI+SG+ +P+PDKSAPVYITVGDGGNQEGLA +F QPDYSAFRE+SYGHSTLE+
Sbjct: 366 NIVYNITSGNRYPIPDKSAPVYITVGDGGNQEGLAERFSESQPDYSAFRESSYGHSTLEL 425
Query: 413 KNRTHAFYHWNRNDDGKKVATDSFILHNQYWASN 446
+NRTHAFY WNRNDDGK + D I NQYWASN
Sbjct: 426 RNRTHAFYQWNRNDDGKHIPVDRIIFRNQYWASN 459
|
Phosphoenolpyruvate phosphatase that probably operates in the vacuole to release phosphate from phosphoenolpyruvate (PEP) under phosphorus starvation. Allium cepa (taxid: 4679) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 6 EC: 0 |
| >sp|Q9SDZ9|PPAF2_IPOBA Purple acid phosphatase 2 OS=Ipomoea batatas GN=PAP2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 521 bits (1343), Expect = e-147, Method: Compositional matrix adjust.
Identities = 252/444 (56%), Positives = 320/444 (72%), Gaps = 16/444 (3%)
Query: 15 AIVLLSDVNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVHITQGDYDGKAV 74
A+VL + +N AGITS FIR ++D+PLD++ F VP G+N+PQQVHITQGD+ GKA+
Sbjct: 12 AVVLAAVMNAAIAGITSSFIRKVEKTVDMPLDSDVFRVPPGYNAPQQVHITQGDHVGKAM 71
Query: 75 IISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYY 134
I+SWVT EPG S V Y + + A G + YT++ Y SGYIH C + LEY+TKYY
Sbjct: 72 IVSWVTVDEPGSSKVVYWSENSQHKKVARGNIRTYTYFNYTSGYIHHCTIRNLEYNTKYY 131
Query: 135 YKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYMES--GAQTVLFL 192
Y++G G+++R FWF TPP++ PD Y FG+IGDLGQ+++S TL HY + Q VLF+
Sbjct: 132 YEVGIGNTTRSFWFTTPPEVGPDVPYTFGLIGDLGQSFDSNRTLTHYERNPIKGQAVLFV 191
Query: 193 GDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLH 252
GDLSYAD Y D VRWD+WGRFVERS AYQPWIW+AGNHEI++ +GE PFK +
Sbjct: 192 GDLSYADNYPNHD-NVRWDTWGRFVERSTAYQPWIWTAGNHEIDFAPEIGETKPFKPFTK 250
Query: 253 RYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWL 312
RY P+ AS S+ WY I+RASA+IIVLSSYS + KYTPQ++WL EEL KV+R +TPWL
Sbjct: 251 RYHVPYKASGSTETFWYPIKRASAYIIVLSSYSAYGKYTPQYKWLEEELPKVNRTETPWL 310
Query: 313 IVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDY-------------RISNLHYNIS 359
IVLMH P YNS H+MEGE+MR +E WFV++KVD R+SN+ Y+I
Sbjct: 311 IVLMHSPWYNSYNYHYMEGETMRVMYEPWFVQHKVDLVFAGHVHAYERSERVSNVAYDIV 370
Query: 360 SGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAF 419
+G C PV D+SAPVYIT+GDGGN EGLA PQP+YSAFREAS+GH+TL+IKNRTHA+
Sbjct: 371 NGKCTPVRDQSAPVYITIGDGGNLEGLATNMTDPQPEYSAFREASFGHATLDIKNRTHAY 430
Query: 420 YHWNRNDDGKKVATDSFILHNQYW 443
Y W+RN DG V DS + N++W
Sbjct: 431 YSWHRNQDGYAVEADSMWVSNRFW 454
|
Ipomoea batatas (taxid: 4120) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q38924|PPA12_ARATH Fe(3+)-Zn(2+) purple acid phosphatase 12 OS=Arabidopsis thaliana GN=PAP12 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 521 bits (1343), Expect = e-147, Method: Compositional matrix adjust.
Identities = 260/453 (57%), Positives = 324/453 (71%), Gaps = 17/453 (3%)
Query: 12 LTTAIVLLSD-VNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVHITQGDYD 70
++ I LLS V G TS+++R D+PLD++ F VP G NSPQQVH+TQG+++
Sbjct: 12 VSLIIFLLSVLVEFCYGGFTSEYVRGSDLPDDMPLDSDVFEVPPGPNSPQQVHVTQGNHE 71
Query: 71 GKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYD 130
G VIISWVTP +PG TV Y +K AE TVN Y F+ Y SGYIH CL+D LE+D
Sbjct: 72 GNGVIISWVTPVKPGSKTVQYWCENEKSRKQAEATVNTYRFFNYTSGYIHHCLIDDLEFD 131
Query: 131 TKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHY-MESG-AQT 188
TKYYY+IGSG SR FWF PPK PD Y FG+IGDLGQTY+S STL HY M G Q
Sbjct: 132 TKYYYEIGSGKWSRRFWFFIPPKSGPDVPYTFGLIGDLGQTYDSNSTLSHYEMNPGKGQA 191
Query: 189 VLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFK 248
VLF+GDLSYADRY D RWD+WGRFVERS AYQPWIW+AGNHEI+++ +GE+ PFK
Sbjct: 192 VLFVGDLSYADRYPNHDNN-RWDTWGRFVERSVAYQPWIWTAGNHEIDFVPDIGEIEPFK 250
Query: 249 SYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREK 308
+++RY TPH AS S SPLWY+I+RASA+IIV+S YS + YTPQ++WL +EL+ V+R +
Sbjct: 251 PFMNRYHTPHKASGSISPLWYSIKRASAYIIVMSCYSSYGIYTPQYKWLEKELQGVNRTE 310
Query: 309 TPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDY-------------RISNLH 355
TPWLIVL+H P Y+S H+MEGE++R +E WFV+YKVD R+SN+
Sbjct: 311 TPWLIVLVHSPFYSSYVHHYMEGETLRVMYEQWFVKYKVDVVFAGHVHAYERSERVSNIA 370
Query: 356 YNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNR 415
YNI +G C P+ D+SAP+YIT+GDGGN EGL PQP YSAFREAS+GH LEIKNR
Sbjct: 371 YNIVNGLCEPISDESAPIYITIGDGGNSEGLLTDMMQPQPKYSAFREASFGHGLLEIKNR 430
Query: 416 THAFYHWNRNDDGKKVATDSFILHNQYWASNRR 448
THA++ WNRN DG VA DS L N++W + ++
Sbjct: 431 THAYFSWNRNQDGNAVAADSVWLLNRFWRAQKK 463
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9SE00|PPAF1_IPOBA Purple acid phosphatase 1 OS=Ipomoea batatas GN=PAP1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 518 bits (1333), Expect = e-146, Method: Compositional matrix adjust.
Identities = 260/466 (55%), Positives = 329/466 (70%), Gaps = 26/466 (5%)
Query: 4 MRLLLHLALTTAIV--LLSDVNGGSAGITSKFIRTEWPS------IDIPLDNEAFAVPKG 55
MRL++ + L I+ +L+ AG+TS ++R + +D+P D++ FAVP G
Sbjct: 1 MRLVV-VGLWCLILGLILNPTKFCDAGVTSSYVRKSLSALPNAEDVDMPWDSDVFAVPSG 59
Query: 56 HNSPQQVHITQGDYDGKAVIISWVTPHE-PGPSTVSYGTSADKFDFTAEGTVNNYTFYKY 114
+N+PQQVHITQGDY+G+ VIISW TP++ G + V Y + K A GTV Y +Y Y
Sbjct: 60 YNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVVYWSENSKSQKRAMGTVVTYKYYNY 119
Query: 115 KSGYIHQCLVDGLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNS 174
S +IH C + LEYDTKYYY++G GD+ R+FWF TPPK PD Y FG+IGD+GQT++S
Sbjct: 120 TSAFIHHCTIKDLEYDTKYYYRLGFGDAKRQFWFVTPPKPGPDVPYVFGLIGDIGQTHDS 179
Query: 175 LSTLEHYMESGA--QTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGN 232
+TL HY ++ A Q VLF+GDLSY++R+ D RWD+WGRF ERS AYQPWIW+AGN
Sbjct: 180 NTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNN-RWDTWGRFSERSVAYQPWIWTAGN 238
Query: 233 HEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTP 292
HEI+Y +GE PF + +RYPTPH AS S PLWYAI+RASAHIIVLSSYS FVKY+P
Sbjct: 239 HEIDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYSP 298
Query: 293 QWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDY--- 349
Q++W EL+KV+R +TPWLIVL+H P+YNS EAH+MEGE+MRA FE +FV YKVD
Sbjct: 299 QYKWFTSELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFS 358
Query: 350 ----------RISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSA 399
R+SN+ YNI + C PV D+SAPVYIT+GDGGN EGLA + PQP YSA
Sbjct: 359 GHVHSYERSERVSNVAYNIVNAKCTPVSDESAPVYITIGDGGNSEGLASEMTQPQPSYSA 418
Query: 400 FREASYGHSTLEIKNRTHAFYHWNRNDDGKKVATDSFILHNQYWAS 445
FREAS+GH +IKNRTHA + W+RN DG V DS L N+YWAS
Sbjct: 419 FREASFGHGIFDIKNRTHAHFSWHRNQDGASVEADSLWLLNRYWAS 464
|
Ipomoea batatas (taxid: 4120) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q09131|PPAF_SOYBN Purple acid phosphatase OS=Glycine max GN=PAP PE=1 SV=2 | Back alignment and function description |
|---|
Score = 507 bits (1306), Expect = e-143, Method: Compositional matrix adjust.
Identities = 253/437 (57%), Positives = 309/437 (70%), Gaps = 19/437 (4%)
Query: 22 VNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVHITQGDYDGKAVIISWVTP 81
NGGS +S FIR ++D+PLD++ FAVP G+N+PQQVHITQGD GKAVI+SWVT
Sbjct: 20 CNGGS---SSPFIRKVEKTVDMPLDSDVFAVPPGYNAPQQVHITQGDLVGKAVIVSWVTV 76
Query: 82 HEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGSGD 141
EPG S V Y + AEG + Y F+ Y SG+IH + LEY TKYYY++G G+
Sbjct: 77 DEPGSSEVHYWSENSDKKKIAEGKLVTYRFFNYSSGFIHHTTIRNLEYKTKYYYEVGLGN 136
Query: 142 SSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYMES--GAQTVLFLGDLSYAD 199
++R+FWF TPP+I PD Y FG+IGDLGQ+++S TL HY + QTVLF+GDLSYAD
Sbjct: 137 TTRQFWFVTPPEIGPDVPYTFGLIGDLGQSFDSNKTLSHYELNPRKGQTVLFVGDLSYAD 196
Query: 200 RYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHL 259
Y D +RWDSWGRF ERS AYQPWIW+AGNHE + +GE VPFK Y HRY P+
Sbjct: 197 NYPNHD-NIRWDSWGRFTERSVAYQPWIWTAGNHENHFAPEIGETVPFKPYTHRYHVPYK 255
Query: 260 ASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLMHVP 319
AS+S+SP WY+I+RASAHIIVL+SYS + KYTPQ++WL +EL KV+R +TPWLIVLMH P
Sbjct: 256 ASQSTSPFWYSIKRASAHIIVLASYSAYGKYTPQYKWLEKELPKVNRTETPWLIVLMHSP 315
Query: 320 IYNSNEAHFMEGESMRAAFESWFVRYKVDY-------------RISNLHYNISSGDCFPV 366
YNS H+MEGE+MR +E WFV+YKVD R+SN+ YNI +G C PV
Sbjct: 316 WYNSYNYHYMEGETMRVMYEPWFVQYKVDVVFAGHVHAYERSERVSNVAYNIVNGLCAPV 375
Query: 367 PDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRND 426
DKSAPVYIT+GDGG EGLA PQP YSAFREAS+GH+ +I NRTHA Y W+RN
Sbjct: 376 NDKSAPVYITIGDGGTLEGLATNMTEPQPKYSAFREASFGHAIFDITNRTHAHYSWHRNQ 435
Query: 427 DGKKVATDSFILHNQYW 443
DG V DS N+YW
Sbjct: 436 DGVAVEADSLWSFNRYW 452
|
Glycine max (taxid: 3847) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9SIV9|PPA10_ARATH Purple acid phosphatase 10 OS=Arabidopsis thaliana GN=PAP10 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 498 bits (1281), Expect = e-140, Method: Compositional matrix adjust.
Identities = 245/449 (54%), Positives = 308/449 (68%), Gaps = 18/449 (4%)
Query: 10 LALTTAIVLLSDVNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVHITQGDY 69
+ L VL S + G GITS+++R ++D+PLD++ F VP G+N+PQQVHITQGD
Sbjct: 12 IVLVLCCVLNSLLCNG--GITSRYVRKLEATVDMPLDSDVFRVPCGYNAPQQVHITQGDV 69
Query: 70 DGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEY 129
+GKAVI+SWVT G + V Y A G N Y FY Y SG+IH C + LEY
Sbjct: 70 EGKAVIVSWVTQEAKGSNKVIYWKENSTKKHKAHGKTNTYKFYNYTSGFIHHCPIRNLEY 129
Query: 130 DTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYME--SGAQ 187
DTKYYY +G G + R+FWF TPP+I PD Y FG+IGDLGQ+Y+S TL HY + Q
Sbjct: 130 DTKYYYVLGVGQTERKFWFFTPPEIGPDVPYTFGLIGDLGQSYDSNITLTHYENNPTKGQ 189
Query: 188 TVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPF 247
VLF+GD+SYAD Y D RWDSWGRF ERS AYQPWIW+ GNHE+++ +GE PF
Sbjct: 190 AVLFVGDISYADTYPDHD-NRRWDSWGRFAERSTAYQPWIWTTGNHELDFAPEIGENRPF 248
Query: 248 KSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDRE 307
K + HRY TP+ +S S+ P WY+I+R A+IIVL+SYS + KYTPQ++WL EE KV+R
Sbjct: 249 KPFTHRYRTPYRSSGSTEPFWYSIKRGPAYIIVLASYSAYGKYTPQYQWLEEEFPKVNRT 308
Query: 308 KTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDY-------------RISNL 354
+TPWLIVLMH P YNS + H+MEGE+MR +E+WFV+YKVD R+SN+
Sbjct: 309 ETPWLIVLMHSPWYNSYDYHYMEGETMRVMYEAWFVKYKVDVVFAGHVHAYERSERVSNI 368
Query: 355 HYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKN 414
YN+ +G C PV D+SAPVYIT+GDGGN EGLA K PQP YSAFREAS+GH+ IKN
Sbjct: 369 AYNVVNGICTPVKDQSAPVYITIGDGGNIEGLATKMTEPQPKYSAFREASFGHAIFSIKN 428
Query: 415 RTHAFYHWNRNDDGKKVATDSFILHNQYW 443
RTHA Y W+RN DG V D +N++W
Sbjct: 429 RTHAHYGWHRNHDGYAVEGDRMWFYNRFW 457
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9C510|PPA6_ARATH Purple acid phosphatase 6 OS=Arabidopsis thaliana GN=PAP6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 484 bits (1245), Expect = e-136, Method: Compositional matrix adjust.
Identities = 248/457 (54%), Positives = 317/457 (69%), Gaps = 32/457 (7%)
Query: 7 LLHLALTTAIVLLSDVNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVHITQ 66
L L++TT I + GITSKF+R PSI++ LD F P G+N+P+QVH+TQ
Sbjct: 9 FLFLSITTVI---------NGGITSKFVRQALPSIEMSLD--TFPSPGGYNTPEQVHLTQ 57
Query: 67 GDYDGKAVIISWVTP-HEPGPSTVSYGTSADKFDFT-----AEGTVNNYTFYKYKSGYIH 120
GD+DG+ +I+SWVTP + G + V+Y + + D A + +Y FY Y SG++H
Sbjct: 58 GDHDGRGMIVSWVTPLNLAGSNVVTYWIATNGSDVKPAKKRAHASTKSYRFYDYSSGFLH 117
Query: 121 QCLVDGLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEH 180
+ GLEYDTKY Y++G+ S R+F F TPPKI PD Y FGIIGDLGQTY S TL H
Sbjct: 118 HATIKGLEYDTKYIYEVGTDKSVRQFSFTTPPKIGPDVPYTFGIIGDLGQTYASNETLYH 177
Query: 181 YMES-GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMT 239
YM + Q VLF GDLSYAD + D +WD+WGRF+E AAYQP+I++AGNHEI+++
Sbjct: 178 YMSNPKGQAVLFAGDLSYADDHPNHD-QRKWDTWGRFMEPCAAYQPFIFAAGNHEIDFVP 236
Query: 240 YMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLRE 299
+GE FK Y HRYP + AS+S+SPLWY++RRASAHIIVLSSYS + KYTPQ+ WL +
Sbjct: 237 NIGEPHAFKPYTHRYPNAYKASQSTSPLWYSVRRASAHIIVLSSYSAYGKYTPQYIWLEQ 296
Query: 300 ELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDY---------- 349
ELK V+RE+TPWLIV++H P YNSN H+MEGESMR FESW V KVD
Sbjct: 297 ELKNVNREETPWLIVIVHSPWYNSNNYHYMEGESMRVMFESWLVNSKVDLVLSGHVHAYE 356
Query: 350 ---RISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYG 406
RISN+ YNI++G PV D +AP+YIT+GDGGN EG+A F PQP YSA+REAS+G
Sbjct: 357 RSERISNIKYNITNGLSSPVKDPNAPIYITIGDGGNIEGIANSFVDPQPSYSAYREASFG 416
Query: 407 HSTLEIKNRTHAFYHWNRNDDGKKVATDSFILHNQYW 443
H+ LEI NRTHA Y W+RN D + VA DS +LHN+++
Sbjct: 417 HAVLEIMNRTHAQYTWHRNQDNEPVAADSIMLHNRHF 453
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|O23244|PPA25_ARATH Purple acid phosphatase 25 OS=Arabidopsis thaliana GN=PAP25 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 483 bits (1244), Expect = e-135, Method: Compositional matrix adjust.
Identities = 252/462 (54%), Positives = 321/462 (69%), Gaps = 30/462 (6%)
Query: 1 MEKMRLLLHLALTTAIVLLSDVNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQ 60
M K+ LL+ + L+ A V+ ++G TS F+RT PS ++ L E F P GHN+P+
Sbjct: 3 MNKI-LLVFVFLSIATVI-------NSGTTSNFVRTAQPSTEMSL--ETFPSPAGHNAPE 52
Query: 61 QVHITQGDYDGKAVIISWVTP-HEPGPSTVSYGTSAD----KFDFTAEGTVNNYTFYKYK 115
QVHI QGDY+G+ +IISWVTP + G + V+Y + D + ++Y FY Y
Sbjct: 53 QVHIVQGDYNGRGIIISWVTPLNLAGSNVVTYWKAVDGDVKPKKKRGHASTSSYRFYDYT 112
Query: 116 SGYIHQCLVDGLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSL 175
SG++H + GLEYDTKY Y++G+ S R+F F +PPK+ PD Y FGIIGDLGQT S
Sbjct: 113 SGFLHHATIKGLEYDTKYIYEVGTDGSVRQFSFTSPPKVGPDVPYTFGIIGDLGQTLASN 172
Query: 176 STLEHYMES-GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHE 234
TL HYM + Q VLF GDLSYAD + D +WDSWGRFVE AAYQ +I++AGNHE
Sbjct: 173 ETLYHYMSNPKGQAVLFPGDLSYADDHPNHD-QRKWDSWGRFVEPCAAYQTFIYAAGNHE 231
Query: 235 IEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQW 294
I+++ +GE FK Y+HRY + ASKS SPLWY+IRRASAHIIVLSSYS + KYTPQ+
Sbjct: 232 IDFVPNIGEPHAFKPYIHRYHNAYKASKSISPLWYSIRRASAHIIVLSSYSAYGKYTPQY 291
Query: 295 EWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDY----- 349
WL +ELKKV+RE+TPWLIV++H P YNSN H+MEGESMRA FESWFV KVD
Sbjct: 292 VWLEQELKKVNREETPWLIVMVHSPWYNSNNYHYMEGESMRAMFESWFVNSKVDLVLSGH 351
Query: 350 --------RISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFR 401
R+SN+ YNI++G +PV D SAP+YIT+GDGGN EG+A F PQP YSA+R
Sbjct: 352 VHSYERSERVSNIKYNITNGLSYPVKDPSAPIYITIGDGGNIEGIANSFTDPQPSYSAYR 411
Query: 402 EASYGHSTLEIKNRTHAFYHWNRNDDGKKVATDSFILHNQYW 443
EAS+GH+ LEI NRTHA+Y W+RN D + VA DS +LHN+Y+
Sbjct: 412 EASFGHAVLEIYNRTHAYYTWHRNQDNEPVAADSIMLHNRYF 453
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|P80366|PPAF_PHAVU Fe(3+)-Zn(2+) purple acid phosphatase OS=Phaseolus vulgaris PE=1 SV=2 | Back alignment and function description |
|---|
Score = 473 bits (1216), Expect = e-132, Method: Compositional matrix adjust.
Identities = 232/426 (54%), Positives = 298/426 (69%), Gaps = 16/426 (3%)
Query: 33 FIRTEWPSIDIPLDNEAFAVPKGHNSPQQVHITQGDYDGKAVIISWVTPHEPGPSTVSYG 92
F+R + D+PLD++ F VP G+N+PQQVHITQGD G+A+IISWVT EPG S V Y
Sbjct: 1 FVRKTNKNRDMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYW 60
Query: 93 TSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGSGDSSREFWFQTPP 152
+ + A+G ++ Y F+ Y SG+IH + L+Y+TKYYY++G +++R F F TPP
Sbjct: 61 SEKNGRKRIAKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRNTTRRFSFITPP 120
Query: 153 KIDPDASYKFGIIGDLGQTYNSLSTLEHYMES--GAQTVLFLGDLSYADRYQFIDVGVRW 210
+ D Y FG+IGDLGQ+++S +TL HY S QTVLF+GDLSYADRY D VRW
Sbjct: 121 QTGLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHD-NVRW 179
Query: 211 DSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYA 270
D+WGRF ERS AYQPWIW+AGNHEIE+ + E PFK + +RY P+ AS+S+SP WY+
Sbjct: 180 DTWGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYS 239
Query: 271 IRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFME 330
I+RASAHIIVLSS+ + + TPQ+ WL++EL+KV R +TPWLIVLMH P+YNS HFME
Sbjct: 240 IKRASAHIIVLSSHIAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFME 299
Query: 331 GESMRAAFESWFVRYKVDY-------------RISNLHYNISSGDCFPVPDKSAPVYITV 377
GE+MR FE+WFV+YKVD R+SN+ Y I+ G C PV D+SAPVYIT+
Sbjct: 300 GEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITDGLCTPVKDQSAPVYITI 359
Query: 378 GDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGKKVATDSFI 437
GD GN + PQP+YSAFREAS+GH +IKNRTHA + WNRN DG V DS
Sbjct: 360 GDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVW 419
Query: 438 LHNQYW 443
N++W
Sbjct: 420 FFNRHW 425
|
Phaseolus vulgaris (taxid: 3885) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 466 | ||||||
| 224120334 | 483 | predicted protein [Populus trichocarpa] | 0.989 | 0.954 | 0.808 | 0.0 | |
| 255579857 | 488 | Iron(III)-zinc(II) purple acid phosphata | 0.982 | 0.938 | 0.787 | 0.0 | |
| 224142549 | 475 | predicted protein [Populus trichocarpa] | 0.980 | 0.962 | 0.797 | 0.0 | |
| 297805048 | 475 | ATPAP26/PAP26 [Arabidopsis lyrata subsp. | 0.976 | 0.957 | 0.775 | 0.0 | |
| 15242870 | 475 | purple acid phosphatase 26 [Arabidopsis | 0.989 | 0.970 | 0.771 | 0.0 | |
| 225446227 | 487 | PREDICTED: bifunctional purple acid phos | 0.963 | 0.921 | 0.790 | 0.0 | |
| 56788343 | 475 | putative purple acid phosphatase [Arabid | 0.989 | 0.970 | 0.768 | 0.0 | |
| 357601492 | 476 | PAP26 [Gossypium hirsutum] | 0.980 | 0.960 | 0.768 | 0.0 | |
| 296084523 | 462 | unnamed protein product [Vitis vinifera] | 0.952 | 0.961 | 0.794 | 0.0 | |
| 224143192 | 478 | predicted protein [Populus trichocarpa] | 0.961 | 0.937 | 0.776 | 0.0 |
| >gi|224120334|ref|XP_002331022.1| predicted protein [Populus trichocarpa] gi|222872952|gb|EEF10083.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 810 bits (2092), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/475 (80%), Positives = 419/475 (88%), Gaps = 14/475 (2%)
Query: 1 MEKMRLLLHLALTTAIVLLSDVNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQ 60
+E +LL L L ++ L V G+AGITS FIR+EWPSIDIPLDNE FAVPKG+N+PQ
Sbjct: 5 VETQSMLLQLILVF-VIFLGFVKNGNAGITSAFIRSEWPSIDIPLDNEVFAVPKGYNAPQ 63
Query: 61 QVHITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIH 120
QVHITQGDY+GKAVIISWVTP EPG + V YG S K+DFTAEGTV NYTFY YKSGYIH
Sbjct: 64 QVHITQGDYNGKAVIISWVTPDEPGTNKVQYGVSKKKYDFTAEGTVKNYTFYNYKSGYIH 123
Query: 121 QCLVDGLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEH 180
QCLVDGLEY+TKYYYKIGSGDSSREFWFQTPPKI+PD YKFGIIGDLGQTYNSLSTLEH
Sbjct: 124 QCLVDGLEYETKYYYKIGSGDSSREFWFQTPPKINPDTPYKFGIIGDLGQTYNSLSTLEH 183
Query: 181 YMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTY 240
YM+SGAQ VLF+GDL+YADRY++ DVG+RWDSWGRFVERSAAYQPW+WSAGNHEIEYM Y
Sbjct: 184 YMQSGAQAVLFVGDLAYADRYKYNDVGIRWDSWGRFVERSAAYQPWMWSAGNHEIEYMPY 243
Query: 241 MGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREE 300
MGEV+PFKSYL+RYPTPHLASKSSSP WYAIRRASAHIIVLSSYS FVKYTPQWEWLREE
Sbjct: 244 MGEVIPFKSYLNRYPTPHLASKSSSPFWYAIRRASAHIIVLSSYSSFVKYTPQWEWLREE 303
Query: 301 LKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVD------------ 348
LK+VDREKTPWLIVLMH+PIYNSNEAHFMEGESMRA FE WFVRYKVD
Sbjct: 304 LKRVDREKTPWLIVLMHIPIYNSNEAHFMEGESMRAVFEKWFVRYKVDVVFAGHVHAYER 363
Query: 349 -YRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGH 407
YR+SN+HYN+SSGD FP D+SAPVYITVGDGGNQEGLAG+FR PQPDYSAFREASYGH
Sbjct: 364 SYRVSNIHYNVSSGDRFPAADESAPVYITVGDGGNQEGLAGRFRDPQPDYSAFREASYGH 423
Query: 408 STLEIKNRTHAFYHWNRNDDGKKVATDSFILHNQYWASNRRRRKLNKHYLRSVVG 462
STLEIKNRTHA YHWNRNDDGKKV TD+F+LHNQYW N RR+KL +H+LR+VVG
Sbjct: 424 STLEIKNRTHAIYHWNRNDDGKKVPTDAFVLHNQYWGRNLRRKKLKQHHLRTVVG 478
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255579857|ref|XP_002530765.1| Iron(III)-zinc(II) purple acid phosphatase precursor, putative [Ricinus communis] gi|223529681|gb|EEF31625.1| Iron(III)-zinc(II) purple acid phosphatase precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 789 bits (2037), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/471 (78%), Positives = 411/471 (87%), Gaps = 13/471 (2%)
Query: 5 RLLLHLALTTAIVLLSDVNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVHI 64
+++ ++ + VLL VN +AGITS FIR+EWPSIDIPLDNE FAVPKG+N+PQQVHI
Sbjct: 6 KMMQYMLILAFFVLLDFVNNANAGITSSFIRSEWPSIDIPLDNEVFAVPKGYNAPQQVHI 65
Query: 65 TQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLV 124
TQGDY+GKAVIISWVTP EPG S V YG S +K+DF AEGT NYTFY+YKSGYIHQCL+
Sbjct: 66 TQGDYNGKAVIISWVTPDEPGSSKVQYGVSENKYDFIAEGTARNYTFYQYKSGYIHQCLI 125
Query: 125 DGLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYMES 184
D LEYDTKYYYKIG GDSSREF+FQTPP I+PD YKFGIIGDLGQTYNSLSTLEH+++S
Sbjct: 126 DDLEYDTKYYYKIGDGDSSREFYFQTPPIINPDTPYKFGIIGDLGQTYNSLSTLEHFIQS 185
Query: 185 GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEV 244
AQ VLF+GDLSYADRYQ+ DVG+RWDSWGRFVE+S AY PW+WSAGNHEIEYM YMGEV
Sbjct: 186 KAQAVLFVGDLSYADRYQYNDVGIRWDSWGRFVEKSTAYLPWLWSAGNHEIEYMPYMGEV 245
Query: 245 VPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKV 304
PFKSYLHRYPTPHLASKSSSPLWYAIR ASAHIIVLSSYSPFVKYTPQWEWL +ELK V
Sbjct: 246 TPFKSYLHRYPTPHLASKSSSPLWYAIRCASAHIIVLSSYSPFVKYTPQWEWLHQELKNV 305
Query: 305 DREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVD-------------YRI 351
+RE+TPWLIVLMHVP+YNSNEAHFMEGESMRA FE WF+RYKVD YRI
Sbjct: 306 NREQTPWLIVLMHVPLYNSNEAHFMEGESMRAVFEKWFIRYKVDIIFAGHVHAYERSYRI 365
Query: 352 SNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLE 411
SN+ YN+SSG+ +P+ DKSAPVYITVGDGGNQEGLA +FR PQPDYSAFREAS+GHSTLE
Sbjct: 366 SNIQYNVSSGERYPIADKSAPVYITVGDGGNQEGLAARFRDPQPDYSAFREASFGHSTLE 425
Query: 412 IKNRTHAFYHWNRNDDGKKVATDSFILHNQYWASNRRRRKLNKHYLRSVVG 462
IKNRTHAFY WNRNDDG KVATD+F+LHNQYWASN RRRKL KH+LRSVVG
Sbjct: 426 IKNRTHAFYQWNRNDDGNKVATDAFVLHNQYWASNPRRRKLKKHHLRSVVG 476
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224142549|ref|XP_002324618.1| predicted protein [Populus trichocarpa] gi|222866052|gb|EEF03183.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 775 bits (2000), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/470 (79%), Positives = 410/470 (87%), Gaps = 13/470 (2%)
Query: 6 LLLHLALTTAIVLLSDVNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVHIT 65
+LL + + L + V G+AGITS FIR+EWPS DIPLD+E FAVPKGHN+PQQVHIT
Sbjct: 1 MLLQVLILVFFFLSASVKNGNAGITSTFIRSEWPSNDIPLDHEVFAVPKGHNAPQQVHIT 60
Query: 66 QGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVD 125
QGDY+GKAVIISWVTP EPG S V YG S +DFTAEG V NYTFY Y SGYIHQCLVD
Sbjct: 61 QGDYNGKAVIISWVTPDEPGTSKVQYGVSKKNYDFTAEGAVRNYTFYNYTSGYIHQCLVD 120
Query: 126 GLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYMESG 185
GLEYDTKYYYKIG+GDS REFWFQTPPKI+PD YKFGIIGDLGQTYNSL+TLEHYM+SG
Sbjct: 121 GLEYDTKYYYKIGNGDSYREFWFQTPPKINPDTPYKFGIIGDLGQTYNSLATLEHYMQSG 180
Query: 186 AQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVV 245
AQ VLF+GDL+YADRY + DVG+RWD+WGRFVERSAAYQPW+WS GNHEIEYM Y+GEV+
Sbjct: 181 AQAVLFVGDLAYADRYMYNDVGIRWDTWGRFVERSAAYQPWMWSVGNHEIEYMPYLGEVI 240
Query: 246 PFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVD 305
PFKSYL+RYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTP+WEWL+EEL++VD
Sbjct: 241 PFKSYLNRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPEWEWLQEELERVD 300
Query: 306 REKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVD-------------YRIS 352
REKTPWLIVLMHVPIYNSNEAHFMEGESMRA FE WFV YKVD YRIS
Sbjct: 301 REKTPWLIVLMHVPIYNSNEAHFMEGESMRAVFEEWFVHYKVDVIFAGHVHAYERSYRIS 360
Query: 353 NLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEI 412
N+HYN+S GDC+P D+SAPVYITVGDGGNQEGLA +FR PQPDYSAFREASYGHSTLEI
Sbjct: 361 NIHYNVSGGDCYPAADESAPVYITVGDGGNQEGLAERFRDPQPDYSAFREASYGHSTLEI 420
Query: 413 KNRTHAFYHWNRNDDGKKVATDSFILHNQYWASNRRRRKLNKHYLRSVVG 462
KNRTHA YHWNRNDDGKKV TD+F+LHNQYW SN RRRKL KH+LRSVVG
Sbjct: 421 KNRTHALYHWNRNDDGKKVPTDAFVLHNQYWGSNLRRRKLKKHHLRSVVG 470
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297805048|ref|XP_002870408.1| ATPAP26/PAP26 [Arabidopsis lyrata subsp. lyrata] gi|297316244|gb|EFH46667.1| ATPAP26/PAP26 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 767 bits (1980), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/468 (77%), Positives = 402/468 (85%), Gaps = 13/468 (2%)
Query: 9 HLALTTAIVLLSDVNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVHITQGD 68
HL + + + V G AG+TS FIR+EWP++DIPLD+ F +PKG+N+PQQVHITQGD
Sbjct: 3 HLVIFSVFLSSVLVYRGDAGVTSSFIRSEWPAVDIPLDHHVFKIPKGYNAPQQVHITQGD 62
Query: 69 YDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLE 128
YDGKAVIISWVTP EPG S V YG K++F AEGT +NYTFYKYKSG+IH CLV GLE
Sbjct: 63 YDGKAVIISWVTPDEPGSSKVYYGAVQGKYEFVAEGTYHNYTFYKYKSGFIHHCLVSGLE 122
Query: 129 YDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYMESGAQT 188
+DTKYYYKI SGDSSREFWF TPP++ PDASYKFGIIGD+GQT+NSLSTLEHYM+SGAQ
Sbjct: 123 HDTKYYYKIESGDSSREFWFVTPPEVHPDASYKFGIIGDMGQTFNSLSTLEHYMQSGAQA 182
Query: 189 VLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFK 248
VLFLGDLSYADRY++ DVGVRWDSWGRFVE S AYQPW+WSAGNHE++YM YMGEV PF+
Sbjct: 183 VLFLGDLSYADRYEYNDVGVRWDSWGRFVEPSTAYQPWLWSAGNHEVDYMPYMGEVTPFR 242
Query: 249 SYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREK 308
+YL RY TP+LASKSSSPLWYA+RRASAHIIVLSSYSPFVKYTPQW WL EELK+VDREK
Sbjct: 243 NYLQRYTTPYLASKSSSPLWYAVRRASAHIIVLSSYSPFVKYTPQWHWLSEELKRVDREK 302
Query: 309 TPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVD-------------YRISNLH 355
TPWLIVLMHVPIYNSNEAHFMEGESMRA FE WFV +KVD YRISN+
Sbjct: 303 TPWLIVLMHVPIYNSNEAHFMEGESMRAVFEEWFVEHKVDVIFAGHVHAYERSYRISNVR 362
Query: 356 YNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNR 415
YN+SSGD FPVPDKSAPVYITVGDGGNQEGLAG+FR PQPDYSAFREASYGHSTL+IKNR
Sbjct: 363 YNVSSGDRFPVPDKSAPVYITVGDGGNQEGLAGRFREPQPDYSAFREASYGHSTLDIKNR 422
Query: 416 THAFYHWNRNDDGKKVATDSFILHNQYWASNRRRRKLNKHYLRSVVGG 463
THA YHWNRNDDGKKVATD F+LHNQYW N RRRKL KHY++SVV G
Sbjct: 423 THAIYHWNRNDDGKKVATDEFVLHNQYWGKNIRRRKLKKHYIKSVVAG 470
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15242870|ref|NP_198334.1| purple acid phosphatase 26 [Arabidopsis thaliana] gi|75249765|sp|Q949Y3.1|PPA26_ARATH RecName: Full=Bifunctional purple acid phosphatase 26; Includes: RecName: Full=Acid phosphatase; Includes: RecName: Full=Peroxidase; Flags: Precursor gi|15292757|gb|AAK92747.1| putative acid phosphatase [Arabidopsis thaliana] gi|20259673|gb|AAM14354.1| putative acid phosphatase [Arabidopsis thaliana] gi|332006529|gb|AED93912.1| purple acid phosphatase 26 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 767 bits (1980), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/476 (77%), Positives = 408/476 (85%), Gaps = 15/476 (3%)
Query: 4 MRLLLHLALTTAIVLLSDVNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVH 63
M L+ +++ + VLL + G +GITS FIR+EWP++DIPLD+ F VPKG+N+PQQVH
Sbjct: 1 MNHLVIISVFLSSVLL--LYRGESGITSSFIRSEWPAVDIPLDHHVFKVPKGYNAPQQVH 58
Query: 64 ITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCL 123
ITQGDYDGKAVIISWVTP EPG S V YG K++F A+GT +NYTFYKYKSG+IH CL
Sbjct: 59 ITQGDYDGKAVIISWVTPDEPGSSQVHYGAVQGKYEFVAQGTYHNYTFYKYKSGFIHHCL 118
Query: 124 VDGLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYME 183
V LE+DTKYYYKI SG+SSREFWF TPP + PDASYKFGIIGD+GQT+NSLSTLEHYME
Sbjct: 119 VSDLEHDTKYYYKIESGESSREFWFVTPPHVHPDASYKFGIIGDMGQTFNSLSTLEHYME 178
Query: 184 SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGE 243
SGAQ VLFLGDLSYADRYQ+ DVGVRWDSWGRFVERS AYQPW+WSAGNHE++YM YMGE
Sbjct: 179 SGAQAVLFLGDLSYADRYQYNDVGVRWDSWGRFVERSTAYQPWLWSAGNHEVDYMPYMGE 238
Query: 244 VVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKK 303
V PF++YL RY TP+LASKSSSPLWYA+RRASAHIIVLSSYSPFVKYTPQW WL EEL +
Sbjct: 239 VTPFRNYLQRYTTPYLASKSSSPLWYAVRRASAHIIVLSSYSPFVKYTPQWHWLSEELTR 298
Query: 304 VDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVD-------------YR 350
VDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFE WFV++KVD YR
Sbjct: 299 VDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFEEWFVQHKVDVIFAGHVHAYERSYR 358
Query: 351 ISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTL 410
ISN+ YN+SSGD +PVPDKSAPVYITVGDGGNQEGLAG+F PQPDYSAFREASYGHSTL
Sbjct: 359 ISNVRYNVSSGDRYPVPDKSAPVYITVGDGGNQEGLAGRFTEPQPDYSAFREASYGHSTL 418
Query: 411 EIKNRTHAFYHWNRNDDGKKVATDSFILHNQYWASNRRRRKLNKHYLRSVVGGLFA 466
+IKNRTHA YHWNRNDDGKKVATD F+LHNQYW N RRRKL KHY+RSVVGG A
Sbjct: 419 DIKNRTHAIYHWNRNDDGKKVATDEFVLHNQYWGKNIRRRKLKKHYIRSVVGGWIA 474
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225446227|ref|XP_002264680.1| PREDICTED: bifunctional purple acid phosphatase 26-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/462 (79%), Positives = 403/462 (87%), Gaps = 13/462 (2%)
Query: 14 TAIVLLSDVNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVHITQGDYDGKA 73
T V + V G+A ITS F+R+E+PS+DIPLDN+ FAVPKG+N+PQQVHITQGDYDGKA
Sbjct: 21 TFFVFMCCVGNGNARITSAFVRSEFPSVDIPLDNKVFAVPKGYNAPQQVHITQGDYDGKA 80
Query: 74 VIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133
VI+SWVT EPGPS V YGTS +D+TAEGT NYTFYKY+SGYIH CLVDGLE+DTKY
Sbjct: 81 VIVSWVTTDEPGPSKVQYGTSEKTYDYTAEGTTTNYTFYKYQSGYIHHCLVDGLEFDTKY 140
Query: 134 YYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYMESGAQTVLFLG 193
YYKIGSG+SS+EFWFQTPP+IDPDA Y FGIIGDLGQTYNSLSTLEHYM S QTVLFLG
Sbjct: 141 YYKIGSGNSSQEFWFQTPPEIDPDAPYIFGIIGDLGQTYNSLSTLEHYMHSEGQTVLFLG 200
Query: 194 DLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHR 253
DLSYADRYQ+ DVGVRWD+WGRFVE+SAAYQPWIWSAGNHEIEYM YMGEV+PFKSYL+R
Sbjct: 201 DLSYADRYQYNDVGVRWDTWGRFVEQSAAYQPWIWSAGNHEIEYMPYMGEVLPFKSYLYR 260
Query: 254 YPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLI 313
+PTP+ ASKSSSPLWYAIRRASAHIIVLSSYSPFV YTPQW WL EE K+V+REKTPWLI
Sbjct: 261 FPTPYAASKSSSPLWYAIRRASAHIIVLSSYSPFVTYTPQWLWLAEEFKRVNREKTPWLI 320
Query: 314 VLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVD-------------YRISNLHYNISS 360
VLMHVPIYNSNEAHFMEGESMRAAFESWF+ KVD YRISN+HY++SS
Sbjct: 321 VLMHVPIYNSNEAHFMEGESMRAAFESWFILNKVDIVFAGHVHAYERSYRISNIHYSVSS 380
Query: 361 GDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFY 420
GD +PVPD+SAPVYITVGDGGNQEGLAG+FR PQPDYSAFREASYGHSTLEIKNRTHAFY
Sbjct: 381 GDPYPVPDESAPVYITVGDGGNQEGLAGRFRDPQPDYSAFREASYGHSTLEIKNRTHAFY 440
Query: 421 HWNRNDDGKKVATDSFILHNQYWASNRRRRKLNKHYLRSVVG 462
WNRN DGK+V+TDSF+LHNQYWAS RKL KH L ++G
Sbjct: 441 RWNRNSDGKQVSTDSFVLHNQYWASKLGSRKLKKHRLGDLIG 482
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|56788343|gb|AAW29950.1| putative purple acid phosphatase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 762 bits (1968), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/476 (76%), Positives = 406/476 (85%), Gaps = 15/476 (3%)
Query: 4 MRLLLHLALTTAIVLLSDVNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVH 63
M L+ +++ + VLL + G +GITS FIR+EWP++DIPLD+ F VPKG+N+PQQVH
Sbjct: 1 MNHLVIISVFLSSVLL--LYRGESGITSSFIRSEWPAVDIPLDHHVFKVPKGYNAPQQVH 58
Query: 64 ITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCL 123
ITQGDYDGKAVIISWVTP EPG S V YG K++F A+GT +NYTFYKYKSG+IH CL
Sbjct: 59 ITQGDYDGKAVIISWVTPDEPGSSQVHYGAVQGKYEFVAQGTYHNYTFYKYKSGFIHHCL 118
Query: 124 VDGLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYME 183
V LE+DTKYYYKI SG+SSREFWF TPP + PDASYKFGIIGD+GQT+NSLSTLEHYME
Sbjct: 119 VSDLEHDTKYYYKIESGESSREFWFVTPPHVHPDASYKFGIIGDMGQTFNSLSTLEHYME 178
Query: 184 SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGE 243
SGAQ VLFLGDLSYADRYQ+ DVGVRWDSWGRFVERS AYQPW+WSAGNHE++YM YMGE
Sbjct: 179 SGAQAVLFLGDLSYADRYQYNDVGVRWDSWGRFVERSTAYQPWLWSAGNHEVDYMPYMGE 238
Query: 244 VVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKK 303
V PF++YL RY TP+LASKSSSPLWYA+RRASAHIIVLSSYSPFVKYTPQW WL EEL +
Sbjct: 239 VTPFRNYLQRYTTPYLASKSSSPLWYAVRRASAHIIVLSSYSPFVKYTPQWHWLSEELTR 298
Query: 304 VDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVD-------------YR 350
VD EKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFE WFV++KVD YR
Sbjct: 299 VDGEKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFEEWFVQHKVDVIFAGHVHAYERSYR 358
Query: 351 ISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTL 410
ISN+ YN+SSGD +PVPDKSAPVYITVGDGGNQEGLAG+F PQPDYSAFREASYGHSTL
Sbjct: 359 ISNVRYNVSSGDRYPVPDKSAPVYITVGDGGNQEGLAGRFTEPQPDYSAFREASYGHSTL 418
Query: 411 EIKNRTHAFYHWNRNDDGKKVATDSFILHNQYWASNRRRRKLNKHYLRSVVGGLFA 466
IKNRTHA YHWNRNDDGKKVATD F+LHNQYW N RRRKL KHY+RSVVGG A
Sbjct: 419 GIKNRTHAIYHWNRNDDGKKVATDEFVLHNQYWGKNIRRRKLKKHYIRSVVGGWIA 474
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357601492|gb|AET86956.1| PAP26 [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 761 bits (1965), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/470 (76%), Positives = 402/470 (85%), Gaps = 13/470 (2%)
Query: 4 MRLLLHLALTTAIVLLSDVNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVH 63
M+ LL + V+L+ VN +AGITS+FIR EWPS+DIPLD+E FAVPKG+N+PQQVH
Sbjct: 1 MKSLLFQFILVPFVILNFVNNVNAGITSRFIREEWPSVDIPLDHEVFAVPKGYNAPQQVH 60
Query: 64 ITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCL 123
ITQG+YDG AVIISW+T EPG S V YG S ++F+AEG + NYTFYKY SGYIH L
Sbjct: 61 ITQGNYDGNAVIISWITFDEPGSSKVQYGKSDKNYEFSAEGKMTNYTFYKYNSGYIHHVL 120
Query: 124 VDGLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYME 183
VDGLEYDTKYYYK G GDS+REFWFQTPP I PD YKFGIIGDLGQTYNSLSTLEHYME
Sbjct: 121 VDGLEYDTKYYYKTGDGDSAREFWFQTPPMIGPDVPYKFGIIGDLGQTYNSLSTLEHYME 180
Query: 184 SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGE 243
SGAQ+VLF+GDLSYADRY++ DVG+RWDSWGRFVE+S AYQPWIWSAGNHEIEYM YM E
Sbjct: 181 SGAQSVLFVGDLSYADRYKYNDVGIRWDSWGRFVEKSTAYQPWIWSAGNHEIEYMPYMNE 240
Query: 244 VVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKK 303
V PFKSYLHRYPTP+LASKSSSP+WYAIRRASAHII+LSSYSPFVKYTPQW+WL EEL +
Sbjct: 241 VTPFKSYLHRYPTPYLASKSSSPMWYAIRRASAHIIMLSSYSPFVKYTPQWKWLEEELNR 300
Query: 304 VDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVD-------------YR 350
VDR+KTPWLIVL+HVPIYNSNEAHFMEGESMRA FE WF+ +KVD YR
Sbjct: 301 VDRKKTPWLIVLVHVPIYNSNEAHFMEGESMRAVFEEWFIHHKVDVIFAGHVHAYERSYR 360
Query: 351 ISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTL 410
ISN+ YN+SSG+ FPVPD+SAPVYITVGDGGNQEGLAGKFR PQPDYSAFREASYGHSTL
Sbjct: 361 ISNIRYNVSSGERFPVPDESAPVYITVGDGGNQEGLAGKFRDPQPDYSAFREASYGHSTL 420
Query: 411 EIKNRTHAFYHWNRNDDGKKVATDSFILHNQYWASNRRRRKLNKHYLRSV 460
EI NRTHA YHWNRNDDGKKVA DSF+L+NQYW+SN R RKL +HYL +
Sbjct: 421 EIMNRTHAVYHWNRNDDGKKVAIDSFVLNNQYWSSNVRERKLKRHYLNGM 470
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296084523|emb|CBI25544.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 761 bits (1965), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/457 (79%), Positives = 401/457 (87%), Gaps = 13/457 (2%)
Query: 19 LSDVNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVHITQGDYDGKAVIISW 78
+ V G+A ITS F+R+E+PS+DIPLDN+ FAVPKG+N+PQQVHITQGDYDGKAVI+SW
Sbjct: 1 MCCVGNGNARITSAFVRSEFPSVDIPLDNKVFAVPKGYNAPQQVHITQGDYDGKAVIVSW 60
Query: 79 VTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIG 138
VT EPGPS V YGTS +D+TAEGT NYTFYKY+SGYIH CLVDGLE+DTKYYYKIG
Sbjct: 61 VTTDEPGPSKVQYGTSEKTYDYTAEGTTTNYTFYKYQSGYIHHCLVDGLEFDTKYYYKIG 120
Query: 139 SGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYMESGAQTVLFLGDLSYA 198
SG+SS+EFWFQTPP+IDPDA Y FGIIGDLGQTYNSLSTLEHYM S QTVLFLGDLSYA
Sbjct: 121 SGNSSQEFWFQTPPEIDPDAPYIFGIIGDLGQTYNSLSTLEHYMHSEGQTVLFLGDLSYA 180
Query: 199 DRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPH 258
DRYQ+ DVGVRWD+WGRFVE+SAAYQPWIWSAGNHEIEYM YMGEV+PFKSYL+R+PTP+
Sbjct: 181 DRYQYNDVGVRWDTWGRFVEQSAAYQPWIWSAGNHEIEYMPYMGEVLPFKSYLYRFPTPY 240
Query: 259 LASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLMHV 318
ASKSSSPLWYAIRRASAHIIVLSSYSPFV YTPQW WL EE K+V+REKTPWLIVLMHV
Sbjct: 241 AASKSSSPLWYAIRRASAHIIVLSSYSPFVTYTPQWLWLAEEFKRVNREKTPWLIVLMHV 300
Query: 319 PIYNSNEAHFMEGESMRAAFESWFVRYKVD-------------YRISNLHYNISSGDCFP 365
PIYNSNEAHFMEGESMRAAFESWF+ KVD YRISN+HY++SSGD +P
Sbjct: 301 PIYNSNEAHFMEGESMRAAFESWFILNKVDIVFAGHVHAYERSYRISNIHYSVSSGDPYP 360
Query: 366 VPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRN 425
VPD+SAPVYITVGDGGNQEGLAG+FR PQPDYSAFREASYGHSTLEIKNRTHAFY WNRN
Sbjct: 361 VPDESAPVYITVGDGGNQEGLAGRFRDPQPDYSAFREASYGHSTLEIKNRTHAFYRWNRN 420
Query: 426 DDGKKVATDSFILHNQYWASNRRRRKLNKHYLRSVVG 462
DGK+V+TDSF+LHNQYWAS RKL KH L ++G
Sbjct: 421 SDGKQVSTDSFVLHNQYWASKLGSRKLKKHRLGDLIG 457
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224143192|ref|XP_002324876.1| predicted protein [Populus trichocarpa] gi|222866310|gb|EEF03441.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 760 bits (1963), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/461 (77%), Positives = 400/461 (86%), Gaps = 13/461 (2%)
Query: 4 MRLLLHLALTTAIVLLSDVNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVH 63
+RL L + +++LS V G+AG+TS F+RT+WP+ DIPLDNE FA+PKG+N+PQQVH
Sbjct: 8 LRLQLFRFVIILVLVLSYVENGNAGLTSTFVRTQWPAADIPLDNEVFAIPKGYNAPQQVH 67
Query: 64 ITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCL 123
ITQGDYDGKAVIISWVTP EPG +V YGTS + +DF+AEGTV NYTFYKYKSGYIH CL
Sbjct: 68 ITQGDYDGKAVIISWVTPDEPGSISVKYGTSENSYDFSAEGTVTNYTFYKYKSGYIHHCL 127
Query: 124 VDGLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYME 183
VDGLEYD+KYYYKIG GDSSR FWFQTPP+IDPDASY FGIIGDLGQTYNSLSTLEHYM+
Sbjct: 128 VDGLEYDSKYYYKIGEGDSSRVFWFQTPPEIDPDASYTFGIIGDLGQTYNSLSTLEHYMK 187
Query: 184 SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGE 243
SG Q+VLF GDLSYADRYQ+ DVG+RWDSWGRFVE+SAAYQPWIWSAGNHEIEYM M E
Sbjct: 188 SGGQSVLFAGDLSYADRYQYDDVGIRWDSWGRFVEQSAAYQPWIWSAGNHEIEYMPEMEE 247
Query: 244 VVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKK 303
V+PFKS+LHR+ TPH ASKS++PLWYAIRRASAHIIVLSSYSPFVKYTPQW WLREELK+
Sbjct: 248 VLPFKSFLHRFATPHTASKSTNPLWYAIRRASAHIIVLSSYSPFVKYTPQWMWLREELKR 307
Query: 304 VDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVD-------------YR 350
V+REKTPWLIV+MHVPIYNSN AH+MEGESMRA FESWFVR KVD YR
Sbjct: 308 VNREKTPWLIVVMHVPIYNSNAAHYMEGESMRAVFESWFVRSKVDFIFAGHVHAYERSYR 367
Query: 351 ISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTL 410
ISN+HYN+++GD +PVPDKSAPVY+TVGDGGNQEGL G+F PQPDYSAFREASYGHSTL
Sbjct: 368 ISNIHYNVTTGDRYPVPDKSAPVYLTVGDGGNQEGLVGRFVDPQPDYSAFREASYGHSTL 427
Query: 411 EIKNRTHAFYHWNRNDDGKKVATDSFILHNQYWASNRRRRK 451
EI+NRTHAFY WNRNDDGK TDS I HNQYWASN RR+
Sbjct: 428 EIRNRTHAFYQWNRNDDGKPETTDSVIFHNQYWASNMHRRR 468
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 466 | ||||||
| TAIR|locus:2184657 | 475 | PAP26 "AT5G34850" [Arabidopsis | 0.978 | 0.96 | 0.776 | 1.2e-207 | |
| TAIR|locus:2005533 | 469 | PAP12 "AT2G27190" [Arabidopsis | 0.899 | 0.893 | 0.588 | 7e-141 | |
| UNIPROTKB|Q09131 | 464 | PAP "Purple acid phosphatase" | 0.922 | 0.926 | 0.576 | 2.2e-137 | |
| TAIR|locus:2042689 | 468 | PAP10 "AT2G16430" [Arabidopsis | 0.924 | 0.920 | 0.547 | 3.8e-133 | |
| TAIR|locus:2115345 | 466 | PAP25 "purple acid phosphatase | 0.907 | 0.907 | 0.559 | 3.2e-129 | |
| TAIR|locus:2010753 | 466 | PAP6 "purple acid phosphatase | 0.914 | 0.914 | 0.550 | 1.4e-128 | |
| TAIR|locus:2011501 | 396 | PAP5 "purple acid phosphatase | 0.791 | 0.931 | 0.520 | 3.1e-106 | |
| TAIR|locus:2053149 | 441 | PAP11 "purple acid phosphatase | 0.626 | 0.662 | 0.570 | 8.6e-88 | |
| TAIR|locus:2075341 | 388 | PAP19 "purple acid phosphatase | 0.442 | 0.530 | 0.519 | 2.5e-81 | |
| TAIR|locus:2085770 | 437 | PAP18 "purple acid phosphatase | 0.819 | 0.874 | 0.409 | 1.9e-74 |
| TAIR|locus:2184657 PAP26 "AT5G34850" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2008 (711.9 bits), Expect = 1.2e-207, P = 1.2e-207
Identities = 368/474 (77%), Positives = 405/474 (85%)
Query: 9 HLALTTAIVLLSDV---NGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVHIT 65
HL + + V LS V G +GITS FIR+EWP++DIPLD+ F VPKG+N+PQQVHIT
Sbjct: 3 HLVIIS--VFLSSVLLLYRGESGITSSFIRSEWPAVDIPLDHHVFKVPKGYNAPQQVHIT 60
Query: 66 QGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVD 125
QGDYDGKAVIISWVTP EPG S V YG K++F A+GT +NYTFYKYKSG+IH CLV
Sbjct: 61 QGDYDGKAVIISWVTPDEPGSSQVHYGAVQGKYEFVAQGTYHNYTFYKYKSGFIHHCLVS 120
Query: 126 GLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYMESG 185
LE+DTKYYYKI SG+SSREFWF TPP + PDASYKFGIIGD+GQT+NSLSTLEHYMESG
Sbjct: 121 DLEHDTKYYYKIESGESSREFWFVTPPHVHPDASYKFGIIGDMGQTFNSLSTLEHYMESG 180
Query: 186 AQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVV 245
AQ VLFLGDLSYADRYQ+ DVGVRWDSWGRFVERS AYQPW+WSAGNHE++YM YMGEV
Sbjct: 181 AQAVLFLGDLSYADRYQYNDVGVRWDSWGRFVERSTAYQPWLWSAGNHEVDYMPYMGEVT 240
Query: 246 PFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVD 305
PF++YL RY TP+LASKSSSPLWYA+RRASAHIIVLSSYSPFVKYTPQW WL EEL +VD
Sbjct: 241 PFRNYLQRYTTPYLASKSSSPLWYAVRRASAHIIVLSSYSPFVKYTPQWHWLSEELTRVD 300
Query: 306 REKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVD-------------YRIS 352
REKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFE WFV++KVD YRIS
Sbjct: 301 REKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFEEWFVQHKVDVIFAGHVHAYERSYRIS 360
Query: 353 NLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEI 412
N+ YN+SSGD +PVPDKSAPVYITVGDGGNQEGLAG+F PQPDYSAFREASYGHSTL+I
Sbjct: 361 NVRYNVSSGDRYPVPDKSAPVYITVGDGGNQEGLAGRFTEPQPDYSAFREASYGHSTLDI 420
Query: 413 KNRTHAFYHWNRNDDGKKVATDSFILHNQYWASNRRRRKLNKHYLRSVVGGLFA 466
KNRTHA YHWNRNDDGKKVATD F+LHNQYW N RRRKL KHY+RSVVGG A
Sbjct: 421 KNRTHAIYHWNRNDDGKKVATDEFVLHNQYWGKNIRRRKLKKHYIRSVVGGWIA 474
|
|
| TAIR|locus:2005533 PAP12 "AT2G27190" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1378 (490.1 bits), Expect = 7.0e-141, P = 7.0e-141
Identities = 257/437 (58%), Positives = 321/437 (73%)
Query: 28 GITSKFIR-TEWPSIDIPLDNEAFAVPKGHNSPQQVHITQGDYDGKAVIISWVTPHEPGP 86
G TS+++R ++ P D+PLD++ F VP G NSPQQVH+TQG+++G VIISWVTP +PG
Sbjct: 29 GFTSEYVRGSDLPD-DMPLDSDVFEVPPGPNSPQQVHVTQGNHEGNGVIISWVTPVKPGS 87
Query: 87 STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGSGDSSREF 146
TV Y +K AE TVN Y F+ Y SGYIH CL+D LE+DTKYYY+IGSG SR F
Sbjct: 88 KTVQYWCENEKSRKQAEATVNTYRFFNYTSGYIHHCLIDDLEFDTKYYYEIGSGKWSRRF 147
Query: 147 WFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHY-MESG-AQTVLFLGDLSYADRYQFI 204
WF PPK PD Y FG+IGDLGQTY+S STL HY M G Q VLF+GDLSYADRY
Sbjct: 148 WFFIPPKSGPDVPYTFGLIGDLGQTYDSNSTLSHYEMNPGKGQAVLFVGDLSYADRYPNH 207
Query: 205 DVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSS 264
D RWD+WGRFVERS AYQPWIW+AGNHEI+++ +GE+ PFK +++RY TPH AS S
Sbjct: 208 DNN-RWDTWGRFVERSVAYQPWIWTAGNHEIDFVPDIGEIEPFKPFMNRYHTPHKASGSI 266
Query: 265 SPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSN 324
SPLWY+I+RASA+IIV+S YS + YTPQ++WL +EL+ V+R +TPWLIVL+H P Y+S
Sbjct: 267 SPLWYSIKRASAYIIVMSCYSSYGIYTPQYKWLEKELQGVNRTETPWLIVLVHSPFYSSY 326
Query: 325 EAHFMEGESMRAAFESWFVRYKVD---------Y----RISNLHYNISSGDCFPVPDKSA 371
H+MEGE++R +E WFV+YKVD Y R+SN+ YNI +G C P+ D+SA
Sbjct: 327 VHHYMEGETLRVMYEQWFVKYKVDVVFAGHVHAYERSERVSNIAYNIVNGLCEPISDESA 386
Query: 372 PVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGKKV 431
P+YIT+GDGGN EGL PQP YSAFREAS+GH LEIKNRTHA++ WNRN DG V
Sbjct: 387 PIYITIGDGGNSEGLLTDMMQPQPKYSAFREASFGHGLLEIKNRTHAYFSWNRNQDGNAV 446
Query: 432 ATDSFILHNQYWASNRR 448
A DS L N++W + ++
Sbjct: 447 AADSVWLLNRFWRAQKK 463
|
|
| UNIPROTKB|Q09131 PAP "Purple acid phosphatase" [Glycine max (taxid:3847)] | Back alignment and assigned GO terms |
|---|
Score = 1345 (478.5 bits), Expect = 2.2e-137, P = 2.2e-137
Identities = 261/453 (57%), Positives = 322/453 (71%)
Query: 7 LLHLALTTAIVLLSDVNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVHITQ 66
LL LAL + ++ NGGS+ S FIR ++D+PLD++ FAVP G+N+PQQVHITQ
Sbjct: 7 LLALALVLSACVMC--NGGSS---SPFIRKVEKTVDMPLDSDVFAVPPGYNAPQQVHITQ 61
Query: 67 GDYDGKAVIISWVTPHEPGPSTVSYGT-SADKFDFTAEGTVNNYTFYKYKSGYIHQCLVD 125
GD GKAVI+SWVT EPG S V Y + ++DK AEG + Y F+ Y SG+IH +
Sbjct: 62 GDLVGKAVIVSWVTVDEPGSSEVHYWSENSDKKKI-AEGKLVTYRFFNYSSGFIHHTTIR 120
Query: 126 GLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYMESG 185
LEY TKYYY++G G+++R+FWF TPP+I PD Y FG+IGDLGQ+++S TL HY +
Sbjct: 121 NLEYKTKYYYEVGLGNTTRQFWFVTPPEIGPDVPYTFGLIGDLGQSFDSNKTLSHYELNP 180
Query: 186 --AQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGE 243
QTVLF+GDLSYAD Y D +RWDSWGRF ERS AYQPWIW+AGNHE + +GE
Sbjct: 181 RKGQTVLFVGDLSYADNYPNHD-NIRWDSWGRFTERSVAYQPWIWTAGNHENHFAPEIGE 239
Query: 244 VVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKK 303
VPFK Y HRY P+ AS+S+SP WY+I+RASAHIIVL+SYS + KYTPQ++WL +EL K
Sbjct: 240 TVPFKPYTHRYHVPYKASQSTSPFWYSIKRASAHIIVLASYSAYGKYTPQYKWLEKELPK 299
Query: 304 VDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVD---------Y----R 350
V+R +TPWLIVLMH P YNS H+MEGE+MR +E WFV+YKVD Y R
Sbjct: 300 VNRTETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEPWFVQYKVDVVFAGHVHAYERSER 359
Query: 351 ISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTL 410
+SN+ YNI +G C PV DKSAPVYIT+GDGG EGLA PQP YSAFREAS+GH+
Sbjct: 360 VSNVAYNIVNGLCAPVNDKSAPVYITIGDGGTLEGLATNMTEPQPKYSAFREASFGHAIF 419
Query: 411 EIKNRTHAFYHWNRNDDGKKVATDSFILHNQYW 443
+I NRTHA Y W+RN DG V DS N+YW
Sbjct: 420 DITNRTHAHYSWHRNQDGVAVEADSLWSFNRYW 452
|
|
| TAIR|locus:2042689 PAP10 "AT2G16430" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1305 (464.4 bits), Expect = 3.8e-133, P = 3.8e-133
Identities = 246/449 (54%), Positives = 309/449 (68%)
Query: 10 LALTTAIVLLSDVNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVHITQGDY 69
+ L VL S + G GITS+++R ++D+PLD++ F VP G+N+PQQVHITQGD
Sbjct: 12 IVLVLCCVLNSLLCNG--GITSRYVRKLEATVDMPLDSDVFRVPCGYNAPQQVHITQGDV 69
Query: 70 DGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEY 129
+GKAVI+SWVT G + V Y A G N Y FY Y SG+IH C + LEY
Sbjct: 70 EGKAVIVSWVTQEAKGSNKVIYWKENSTKKHKAHGKTNTYKFYNYTSGFIHHCPIRNLEY 129
Query: 130 DTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYMESGA--Q 187
DTKYYY +G G + R+FWF TPP+I PD Y FG+IGDLGQ+Y+S TL HY + Q
Sbjct: 130 DTKYYYVLGVGQTERKFWFFTPPEIGPDVPYTFGLIGDLGQSYDSNITLTHYENNPTKGQ 189
Query: 188 TVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPF 247
VLF+GD+SYAD Y D RWDSWGRF ERS AYQPWIW+ GNHE+++ +GE PF
Sbjct: 190 AVLFVGDISYADTYPDHD-NRRWDSWGRFAERSTAYQPWIWTTGNHELDFAPEIGENRPF 248
Query: 248 KSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDRE 307
K + HRY TP+ +S S+ P WY+I+R A+IIVL+SYS + KYTPQ++WL EE KV+R
Sbjct: 249 KPFTHRYRTPYRSSGSTEPFWYSIKRGPAYIIVLASYSAYGKYTPQYQWLEEEFPKVNRT 308
Query: 308 KTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVD---------Y----RISNL 354
+TPWLIVLMH P YNS + H+MEGE+MR +E+WFV+YKVD Y R+SN+
Sbjct: 309 ETPWLIVLMHSPWYNSYDYHYMEGETMRVMYEAWFVKYKVDVVFAGHVHAYERSERVSNI 368
Query: 355 HYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKN 414
YN+ +G C PV D+SAPVYIT+GDGGN EGLA K PQP YSAFREAS+GH+ IKN
Sbjct: 369 AYNVVNGICTPVKDQSAPVYITIGDGGNIEGLATKMTEPQPKYSAFREASFGHAIFSIKN 428
Query: 415 RTHAFYHWNRNDDGKKVATDSFILHNQYW 443
RTHA Y W+RN DG V D +N++W
Sbjct: 429 RTHAHYGWHRNHDGYAVEGDRMWFYNRFW 457
|
|
| TAIR|locus:2115345 PAP25 "purple acid phosphatase 25" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1268 (451.4 bits), Expect = 3.2e-129, P = 3.2e-129
Identities = 250/447 (55%), Positives = 315/447 (70%)
Query: 17 VLLSDVNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVHITQGDYDGKAVII 76
V LS ++G TS F+RT PS ++ L E F P GHN+P+QVHI QGDY+G+ +II
Sbjct: 11 VFLSIATVINSGTTSNFVRTAQPSTEMSL--ETFPSPAGHNAPEQVHIVQGDYNGRGIII 68
Query: 77 SWVTP-HEPGPSTVSYGTSADKFDFTAE-----GTVNNYTFYKYKSGYIHQCLVDGLEYD 130
SWVTP + G + V+Y + D D + + ++Y FY Y SG++H + GLEYD
Sbjct: 69 SWVTPLNLAGSNVVTYWKAVDG-DVKPKKKRGHASTSSYRFYDYTSGFLHHATIKGLEYD 127
Query: 131 TKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYMESG-AQTV 189
TKY Y++G+ S R+F F +PPK+ PD Y FGIIGDLGQT S TL HYM + Q V
Sbjct: 128 TKYIYEVGTDGSVRQFSFTSPPKVGPDVPYTFGIIGDLGQTLASNETLYHYMSNPKGQAV 187
Query: 190 LFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKS 249
LF GDLSYAD + D +WDSWGRFVE AAYQ +I++AGNHEI+++ +GE FK
Sbjct: 188 LFPGDLSYADDHPNHDQR-KWDSWGRFVEPCAAYQTFIYAAGNHEIDFVPNIGEPHAFKP 246
Query: 250 YLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKT 309
Y+HRY + ASKS SPLWY+IRRASAHIIVLSSYS + KYTPQ+ WL +ELKKV+RE+T
Sbjct: 247 YIHRYHNAYKASKSISPLWYSIRRASAHIIVLSSYSAYGKYTPQYVWLEQELKKVNREET 306
Query: 310 PWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVD---------Y----RISNLHY 356
PWLIV++H P YNSN H+MEGESMRA FESWFV KVD Y R+SN+ Y
Sbjct: 307 PWLIVMVHSPWYNSNNYHYMEGESMRAMFESWFVNSKVDLVLSGHVHSYERSERVSNIKY 366
Query: 357 NISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRT 416
NI++G +PV D SAP+YIT+GDGGN EG+A F PQP YSA+REAS+GH+ LEI NRT
Sbjct: 367 NITNGLSYPVKDPSAPIYITIGDGGNIEGIANSFTDPQPSYSAYREASFGHAVLEIYNRT 426
Query: 417 HAFYHWNRNDDGKKVATDSFILHNQYW 443
HA+Y W+RN D + VA DS +LHN+Y+
Sbjct: 427 HAYYTWHRNQDNEPVAADSIMLHNRYF 453
|
|
| TAIR|locus:2010753 PAP6 "purple acid phosphatase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1262 (449.3 bits), Expect = 1.4e-128, P = 1.4e-128
Identities = 247/449 (55%), Positives = 315/449 (70%)
Query: 15 AIVLLSDVNGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVHITQGDYDGKAV 74
A + LS + GITSKF+R PSI++ LD F P G+N+P+QVH+TQGD+DG+ +
Sbjct: 8 AFLFLSITTVINGGITSKFVRQALPSIEMSLDT--FPSPGGYNTPEQVHLTQGDHDGRGM 65
Query: 75 IISWVTP-HEPGPSTVSYGTSADKFDFT-----AEGTVNNYTFYKYKSGYIHQCLVDGLE 128
I+SWVTP + G + V+Y + + D A + +Y FY Y SG++H + GLE
Sbjct: 66 IVSWVTPLNLAGSNVVTYWIATNGSDVKPAKKRAHASTKSYRFYDYSSGFLHHATIKGLE 125
Query: 129 YDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYMESG-AQ 187
YDTKY Y++G+ S R+F F TPPKI PD Y FGIIGDLGQTY S TL HYM + Q
Sbjct: 126 YDTKYIYEVGTDKSVRQFSFTTPPKIGPDVPYTFGIIGDLGQTYASNETLYHYMSNPKGQ 185
Query: 188 TVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPF 247
VLF GDLSYAD + D +WD+WGRF+E AAYQP+I++AGNHEI+++ +GE F
Sbjct: 186 AVLFAGDLSYADDHPNHDQR-KWDTWGRFMEPCAAYQPFIFAAGNHEIDFVPNIGEPHAF 244
Query: 248 KSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDRE 307
K Y HRYP + AS+S+SPLWY++RRASAHIIVLSSYS + KYTPQ+ WL +ELK V+RE
Sbjct: 245 KPYTHRYPNAYKASQSTSPLWYSVRRASAHIIVLSSYSAYGKYTPQYIWLEQELKNVNRE 304
Query: 308 KTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVD---------Y----RISNL 354
+TPWLIV++H P YNSN H+MEGESMR FESW V KVD Y RISN+
Sbjct: 305 ETPWLIVIVHSPWYNSNNYHYMEGESMRVMFESWLVNSKVDLVLSGHVHAYERSERISNI 364
Query: 355 HYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKN 414
YNI++G PV D +AP+YIT+GDGGN EG+A F PQP YSA+REAS+GH+ LEI N
Sbjct: 365 KYNITNGLSSPVKDPNAPIYITIGDGGNIEGIANSFVDPQPSYSAYREASFGHAVLEIMN 424
Query: 415 RTHAFYHWNRNDDGKKVATDSFILHNQYW 443
RTHA Y W+RN D + VA DS +LHN+++
Sbjct: 425 RTHAQYTWHRNQDNEPVAADSIMLHNRHF 453
|
|
| TAIR|locus:2011501 PAP5 "purple acid phosphatase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1051 (375.0 bits), Expect = 3.1e-106, P = 3.1e-106
Identities = 215/413 (52%), Positives = 274/413 (66%)
Query: 48 EAFAVPKGHNSPQQVHITQGDYDGKAVIISWVTP-HEPGPSTVSYG-TSADKFDFTAE-G 104
E F P G+N+P+QVHITQGD++G+ +IISWVT +E G + V+Y S+D D +
Sbjct: 4 ETFPPPAGYNAPEQVHITQGDHNGRGMIISWVTSLNEDGSNVVTYWIASSDGSDNKSVIA 63
Query: 105 TVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGI 164
T ++Y ++ Y SGY+H ++ LEY TKY+Y++G+G S+R+F TPPK+ PD Y FG+
Sbjct: 64 TTSSYRYFDYTSGYLHHAIIKELEYKTKYFYELGTGRSTRQFNL-TPPKVGPDVPYTFGV 122
Query: 165 IGDLGQTYNSLSTLEHYMESG-AQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAY 223
IGDLGQTY S TL +YM + Q VLF GDLSYAD + D +WDS+GRFVE SAAY
Sbjct: 123 IGDLGQTYASNQTLYNYMSNPKGQAVLFAGDLSYADDHPNHDQS-KWDSYGRFVEPSAAY 181
Query: 224 QPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSS 283
QPWIW+AGNHEI+Y +GE PFK Y +RY P+ AS++
Sbjct: 182 QPWIWAAGNHEIDYAQSIGETQPFKPYKNRYHVPYRASQN-------------------- 221
Query: 284 YSPFVKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFV 343
KYTPQ WL++E KKV+R +TPWLIVL+H P YNSN H+MEGESMR FE WFV
Sbjct: 222 -----KYTPQNSWLQDEFKKVNRSETPWLIVLVHAPWYNSNNYHYMEGESMRVTFEPWFV 276
Query: 344 RYKVD---------Y----RISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKF 390
KVD Y R+SN+ YNI+ G PV D++APVYIT+GDGGN EG+A F
Sbjct: 277 ENKVDIVFAGHVHAYERSERVSNIQYNITDGMSTPVKDQNAPVYITIGDGGNIEGIANIF 336
Query: 391 RYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGKKVATDSFILHNQYW 443
PQP YSAFREAS+GH+ LEIKNRTHA Y W+RN + + V DS L N+Y+
Sbjct: 337 TDPQPSYSAFREASFGHALLEIKNRTHAHYTWHRNKEDEAVIADSIWLKNRYY 389
|
|
| TAIR|locus:2053149 PAP11 "purple acid phosphatase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 877 (313.8 bits), Expect = 8.6e-88, P = 8.6e-88
Identities = 175/307 (57%), Positives = 213/307 (69%)
Query: 151 PPKIDPDASYKFGIIGDLGQTYNSLSTLEHYMESG-AQTVLFLGDLSYADRYQFIDVGVR 209
P K S DLGQTY S TL +YM + Q VLF+GDLSYAD + D +
Sbjct: 129 PSKSRSRCSLHIRYYSDLGQTYASNQTLYNYMSNPKGQAVLFVGDLSYADDHPNHDQR-K 187
Query: 210 WDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWY 269
WDS+GRFVE SAAYQPW W+AGN+EI+Y + E PFK Y +RY P+ AS+S+SPLWY
Sbjct: 188 WDSYGRFVEPSAAYQPWSWAAGNYEIDYAQSISETQPFKPYKNRYHVPYKASQSTSPLWY 247
Query: 270 AIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFM 329
+I+RAS +IIVLSSYS + KYTPQ WL++ELKKV+R +T WLIVL+H P YNSN H+M
Sbjct: 248 SIKRASTYIIVLSSYSAYDKYTPQNSWLQDELKKVNRSETSWLIVLVHAPWYNSNNYHYM 307
Query: 330 EGESMRAAFESWFVRYKVD---------Y----RISNLHYNISSGDCFPVPDKSAPVYIT 376
EGESMR FE WFV KVD Y RISN+HYNI+ G PV D++AP+YIT
Sbjct: 308 EGESMRVTFEPWFVENKVDIVFAGHVHAYERSKRISNIHYNITDGMSTPVKDQNAPIYIT 367
Query: 377 VGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGKKVATDSF 436
+GDGGN EG+A F PQP YSAFREAS+GH+ LEIKNRTHA Y W+RN + + V DS
Sbjct: 368 IGDGGNIEGIANSFTDPQPSYSAFREASFGHALLEIKNRTHAHYTWHRNKEDEAVIADSI 427
Query: 437 ILHNQYW 443
L +Y+
Sbjct: 428 WLKKRYY 434
|
|
| TAIR|locus:2075341 PAP19 "purple acid phosphatase 19" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 591 (213.1 bits), Expect = 2.5e-81, Sum P(2) = 2.5e-81
Identities = 131/252 (51%), Positives = 160/252 (63%)
Query: 209 RWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLW 268
+WDS+GRFVE SAAYQPWIW+AGNHEI+Y E +P K +LH +KS+
Sbjct: 159 KWDSYGRFVEPSAAYQPWIWAAGNHEIDY----AESIPHKVHLH------FGTKSNE--- 205
Query: 269 YAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHF 328
+ + SSYSP + L +ELKKV+R +TPWLIVL+H P YNSN H+
Sbjct: 206 ---------LQLTSSYSPLTQ-------LMDELKKVNRSETPWLIVLVHAPWYNSNNYHY 249
Query: 329 MEGESMRAAFESWFVRYKVD---------Y----RISNLHYNISSGDCFPVPDKSAPVYI 375
MEGESMR FE WFV KVD Y RISN+ YNI+ G PV D++APVYI
Sbjct: 250 MEGESMRVTFEPWFVENKVDIVFAGHVHAYERSERISNIQYNITDGMSTPVKDQNAPVYI 309
Query: 376 TVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGK----KV 431
T+GDGGN EG+A F PQP YSAFREAS+GH+ LEIKNRTHA Y W+RN + + V
Sbjct: 310 TIGDGGNIEGIANNFIDPQPSYSAFREASFGHAILEIKNRTHAHYTWHRNKEDEFIPEAV 369
Query: 432 ATDSFILHNQYW 443
DS L N+Y+
Sbjct: 370 IADSIWLKNRYY 381
|
|
| TAIR|locus:2085770 PAP18 "purple acid phosphatase 18" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 751 (269.4 bits), Expect = 1.9e-74, P = 1.9e-74
Identities = 165/403 (40%), Positives = 235/403 (58%)
Query: 44 PLDNEAFAVP---KGHNSPQQVHIT-QGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFD 99
P E P K + P+QVHI+ GD K + ++WVT + PS V YGTS K+
Sbjct: 29 PKPRETLQFPWKQKSSSVPEQVHISLAGD---KHMRVTWVTNDKSSPSFVEYGTSPGKYS 85
Query: 100 FTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDAS 159
+ +G +Y++ Y+SG IH ++ LE DT YYY+ G G+ EF +TPP P
Sbjct: 86 YLGQGESTSYSYIMYRSGKIHHTVIGPLEADTVYYYRCG-GEGP-EFHLKTPPAQFP--- 140
Query: 160 YKFGIIGDLGQTYNSLSTLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVER 219
F + GDLGQT + STL+H + L GDLSYAD Q +WD++G V+
Sbjct: 141 ITFAVAGDLGQTGWTKSTLDHIDQCKYAVHLLPGDLSYADYMQH-----KWDTFGELVQP 195
Query: 220 SAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHII 279
A+ +PW+ + GNHE E + ++ V F S+ R+ P+ S S+S L+Y+ A H I
Sbjct: 196 LASVRPWMVTQGNHEKESIPFI--VDEFVSFNSRWKMPYEESGSNSNLYYSFEVAGVHAI 253
Query: 280 VLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFE 339
+L SY+ + +Y+ Q+ WL+ +L KVDRE+TPWLIVL HVP YNSN AH EG+ M A E
Sbjct: 254 MLGSYTDYDRYSDQYSWLKADLSKVDRERTPWLIVLFHVPWYNSNNAHQHEGDEMMAEME 313
Query: 340 SWFVRYKVDYRIS-NLH-YNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDY 397
VD + ++H Y + D PV+IT+GDGGN+EGLA K++ P P++
Sbjct: 314 PLLYASGVDIVFTGHVHAYERTKRVNNGKSDPCGPVHITIGDGGNREGLARKYKDPSPEW 373
Query: 398 SAFREASYGHSTLEIKNRTHAFYHWNRNDDGKKVATDSFILHN 440
S FREAS+GH L++ N THA + W+RNDD + +D L++
Sbjct: 374 SVFREASFGHGELQMVNSTHALWTWHRNDDDEPTRSDEVWLNS 416
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q93WP4 | PEPP_ALLCE | 3, ., 1, ., 3, ., 6, 0 | 0.7158 | 0.9313 | 0.9022 | N/A | no |
| Q9SDZ9 | PPAF2_IPOBA | 3, ., 1, ., 3, ., 2 | 0.5675 | 0.9184 | 0.9204 | N/A | no |
| Q949Y3 | PPA26_ARATH | 1, ., 1, 1, ., 1, ., 7 | 0.7710 | 0.9892 | 0.9705 | yes | no |
| Q9SE00 | PPAF1_IPOBA | 3, ., 1, ., 3, ., 2 | 0.5579 | 0.9442 | 0.9302 | N/A | no |
| P80366 | PPAF_PHAVU | 3, ., 1, ., 3, ., 2 | 0.5446 | 0.8798 | 0.9490 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 466 | |||
| cd00839 | 294 | cd00839, MPP_PAPs, purple acid phosphatases of the | 6e-92 | |
| PLN02533 | 427 | PLN02533, PLN02533, probable purple acid phosphata | 2e-89 | |
| pfam14008 | 62 | pfam14008, Metallophos_C, Iron/zinc purple acid ph | 5e-21 | |
| pfam00149 | 185 | pfam00149, Metallophos, Calcineurin-like phosphoes | 2e-19 | |
| cd07378 | 277 | cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 | 7e-05 | |
| COG1409 | 301 | COG1409, Icc, Predicted phosphohydrolases [General | 2e-04 |
| >gnl|CDD|163615 cd00839, MPP_PAPs, purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 280 bits (718), Expect = 6e-92
Identities = 119/306 (38%), Positives = 162/306 (52%), Gaps = 33/306 (10%)
Query: 156 PDASYKFGIIGDLGQ-TYNSLSTLEHYMESG--AQTVLFLGDLSYADRYQFIDVGVRWDS 212
D +KF + GD+GQ T NS +TL+H + +L +GDL+YAD Y + G RWD+
Sbjct: 1 DDTPFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYADGY---NNGSRWDT 57
Query: 213 WGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIR 272
+ R +E A+Y P++ + GNHE +Y K++ R+ PH S S+S LWY+
Sbjct: 58 FMRQIEPLASYVPYMVTPGNHEADYN---FSFYKIKAFFPRFRFPHSPSGSTSNLWYSFD 114
Query: 273 RASAHIIVLSSYSPFV---KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFM 329
H + LS+ F +PQ++WL +L KVDR KTPW+IV+ H P+Y SN H
Sbjct: 115 VGPVHFVSLSTEVDFYGDGPGSPQYDWLEADLAKVDRSKTPWIIVMGHRPMYCSNTDHDD 174
Query: 330 --EGESMRAAFESWFVRYKVD-------------YRISNLHYNISSGDCFPVPDKSAPVY 374
EGE MRAA E F +Y VD + N GDC P + PV+
Sbjct: 175 CIEGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVV---GDCNPYSNPKGPVH 231
Query: 375 ITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGKKVATD 434
I +G GGN EGL P P +SAFRE+ YG L + N TH + W RNDDG + D
Sbjct: 232 IVIGAGGNDEGLDPFSAPP-PAWSAFRESDYGFGRLTVHNSTHLHFEWIRNDDGVVI--D 288
Query: 435 SFILHN 440
SF +
Sbjct: 289 SFWIIK 294
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 294 |
| >gnl|CDD|215292 PLN02533, PLN02533, probable purple acid phosphatase | Back alignment and domain information |
|---|
Score = 278 bits (713), Expect = 2e-89
Identities = 156/386 (40%), Positives = 227/386 (58%), Gaps = 17/386 (4%)
Query: 58 SPQQVHITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYK-YKS 116
P QVHI+ D + ISW+T PS V YGT + K++ +A GT ++Y + Y+S
Sbjct: 43 HPDQVHISLVGPD--KMRISWITQDSIPPSVV-YGTVSGKYEGSANGTSSSYHYLLIYRS 99
Query: 117 GYIHQCLVDGLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLS 176
G I+ ++ L+ +T YYYK G S++EF F+TPP P KF + GDLG + + S
Sbjct: 100 GQINDVVIGPLKPNTVYYYKCGGPSSTQEFSFRTPPSKFP---IKFAVSGDLGTSEWTKS 156
Query: 177 TLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIE 236
TLEH + + GDLSYA+ YQ + WD++GR V+ A+ +PW+ + GNHE+E
Sbjct: 157 TLEHVSKWDYDVFILPGDLSYANFYQPL-----WDTFGRLVQPLASQRPWMVTHGNHELE 211
Query: 237 YMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEW 296
+ + F +Y R+ P S S+S L+Y+ HII+L SY+ F + Q++W
Sbjct: 212 KIPIL-HPEKFTAYNARWRMPFEESGSTSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQW 270
Query: 297 LREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGES--MRAAFESWFVRYKVDYRIS-N 353
L LKK+DR+ TPW++ ++H P YNSNEAH E ES M+ + E+ + +VD + +
Sbjct: 271 LENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESVGMKESMETLLYKARVDLVFAGH 330
Query: 354 LH-YNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEI 412
+H Y DK PVYIT+GDGGN+EGLA K+ P+PD S FREAS+GH L +
Sbjct: 331 VHAYERFDRVYQGKTDKCGPVYITIGDGGNREGLATKYIDPKPDISLFREASFGHGQLNV 390
Query: 413 KNRTHAFYHWNRNDDGKKVATDSFIL 438
+ + W+RNDD + VA+DS L
Sbjct: 391 VDANTMEWTWHRNDDDQSVASDSVWL 416
|
Length = 427 |
| >gnl|CDD|206178 pfam14008, Metallophos_C, Iron/zinc purple acid phosphatase-like protein C | Back alignment and domain information |
|---|
Score = 86.0 bits (214), Expect = 5e-21
Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 370 SAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGK 429
APV+I VG GN F PQP +SAFR++ YG+ L + NRTH ++ + R+DDG
Sbjct: 1 KAPVHIVVGAAGNGLD---PFPDPQPPWSAFRDSDYGYGRLTVHNRTHLYWEFVRSDDGT 57
Query: 430 KVATDSF 436
+ DSF
Sbjct: 58 VL--DSF 62
|
This domain is found at the C-terminus of Purple acid phosphatase proteins. Length = 62 |
| >gnl|CDD|215750 pfam00149, Metallophos, Calcineurin-like phosphoesterase | Back alignment and domain information |
|---|
Score = 85.6 bits (211), Expect = 2e-19
Identities = 38/196 (19%), Positives = 55/196 (28%), Gaps = 21/196 (10%)
Query: 161 KFGIIGDLGQTYNSLSTLEHYME----SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRF 216
+ +IGDL + L L +E VLFLGDL F
Sbjct: 1 RILVIGDLHGGLDDLDLLLLLLELLGEPKPDLVLFLGDLVDRGPP------SLEVLALLF 54
Query: 217 VERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASA 276
+ A P GNH+ + + L S +
Sbjct: 55 ALKLKAPGPVYLVRGNHDFDSGNSELGFYLECAGLPYVLGNGDVSN-----------GTV 103
Query: 277 HIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRA 336
II LSS E+L + I+L+H P+ S ++
Sbjct: 104 EIIGLSSLYGKGGGLVWEEFLELLDLLLLAALVDGKILLVHGPLSPSLDSGDDIYLFGEE 163
Query: 337 AFESWFVRYKVDYRIS 352
A E VD +
Sbjct: 164 ALEDLLKDNGVDLVLR 179
|
This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues. Length = 185 |
| >gnl|CDD|163621 cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 7e-05
Identities = 60/312 (19%), Positives = 92/312 (29%), Gaps = 92/312 (29%)
Query: 161 KFGIIGDLG--QTYNSLSTLEHYM-----ESGAQTVLFLGDLSYADRYQFIDVGVRWDSW 213
+F +GD G T + M E G +L LGD F D GV
Sbjct: 2 RFLALGDWGGGGTAGQKAV-AKAMAKVAAELGPDFILSLGD-------NFYDDGVGSVDD 53
Query: 214 GRFVER-------SAAYQPWIWSAGNH--------EIEYMTYMGEVVPFKSYLHRYPTPH 258
RF + PW GNH +I+Y + P
Sbjct: 54 PRFETTFEDVYSAPSLQVPWYLVLGNHDYSGNVSAQIDY-----------TKRPNSPRWT 102
Query: 259 LASKSSSPLWYAIR------RASAHIIVLSSYSPFVKYTP----------------QWEW 296
+ + +Y + + I++ + P + Q W
Sbjct: 103 MPAY-----YYRVSFPFPSSDTTVEFIMIDT-VPLCGNSDDIASPYGPPNGKLAEEQLAW 156
Query: 297 LREELKKVDREKTPWLIVLMHVPIYNS--NEAHFMEGESMRAAFESWFVRYKVDYRIS-- 352
L + L W IV+ H PIY+S + + + + YKVD +S
Sbjct: 157 LEKTLAAS---TADWKIVVGHHPIYSSGEHGPTSCLVDRLLPLLKK----YKVDAYLSGH 209
Query: 353 --NLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTL 410
NL + D S ++ G G +S F + G + L
Sbjct: 210 DHNLQHI--------KDDGSGTSFVVSGAGSKARPSVKHIDKVPQFFSGFTSSGGGFAYL 261
Query: 411 EIKNR--THAFY 420
E+ T FY
Sbjct: 262 ELTKEELTVRFY 273
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 277 |
| >gnl|CDD|224327 COG1409, Icc, Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Score = 42.6 bits (100), Expect = 2e-04
Identities = 38/205 (18%), Positives = 58/205 (28%), Gaps = 36/205 (17%)
Query: 160 YKFGIIGDL------GQTYNSL-STLEHYMESGAQTVLFLGDLS---YADRYQFIDVGVR 209
+ I DL + L + L + ++ GDL+ + Y+ +
Sbjct: 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGEPEEYRRLK---- 56
Query: 210 WDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWY 269
+ R P I GNH+ GE S L SS W
Sbjct: 57 -----ELLARLELPAPVIVVPGNHDA--RVVNGE---AFSDQFFNRYAVLVGACSSGGW- 105
Query: 270 AIRRASAHIIVLSSYSPFVKYT----PQWEWLREELKKVDREKTPWLIVLMHVPIYNSNE 325
+I L S P V Q +WL E L ++VL H P+ +
Sbjct: 106 -------RVIGLDSSVPGVPLGRLGAEQLDWLEEALAAAPERAKDTVVVLHHHPLPSPGT 158
Query: 326 AHFMEGESMRAAFESWFVRYKVDYR 350
+ + D R
Sbjct: 159 GVDRVALRDAGELLDVLIAHGNDVR 183
|
Length = 301 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 466 | |||
| KOG1378 | 452 | consensus Purple acid phosphatase [Carbohydrate tr | 100.0 | |
| PLN02533 | 427 | probable purple acid phosphatase | 100.0 | |
| cd00839 | 294 | MPP_PAPs purple acid phosphatases of the metalloph | 100.0 | |
| PTZ00422 | 394 | glideosome-associated protein 50; Provisional | 100.0 | |
| cd07378 | 277 | MPP_ACP5 Homo sapiens acid phosphatase 5 and relat | 100.0 | |
| KOG2679 | 336 | consensus Purple (tartrate-resistant) acid phospha | 99.95 | |
| PF09423 | 453 | PhoD: PhoD-like phosphatase; InterPro: IPR018946 T | 99.95 | |
| cd07395 | 262 | MPP_CSTP1 Homo sapiens CSTP1 and related proteins, | 99.95 | |
| COG3540 | 522 | PhoD Phosphodiesterase/alkaline phosphatase D [Ino | 99.93 | |
| cd07402 | 240 | MPP_GpdQ Enterobacter aerogenes GpdQ and related p | 99.9 | |
| cd07396 | 267 | MPP_Nbla03831 Homo sapiens Nbla03831 and related p | 99.88 | |
| PRK11148 | 275 | cyclic 3',5'-adenosine monophosphate phosphodieste | 99.84 | |
| cd07401 | 256 | MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal | 99.8 | |
| cd07399 | 214 | MPP_YvnB Bacillus subtilis YvnB and related protei | 99.79 | |
| cd00842 | 296 | MPP_ASMase acid sphingomyelinase and related prote | 99.7 | |
| PF00149 | 200 | Metallophos: Calcineurin-like phosphoesterase; Int | 99.65 | |
| cd08163 | 257 | MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related | 99.6 | |
| TIGR03767 | 496 | P_acnes_RR metallophosphoesterase, PPA1498 family. | 99.55 | |
| PF14008 | 62 | Metallophos_C: Iron/zinc purple acid phosphatase-l | 99.53 | |
| cd07383 | 199 | MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase | 99.53 | |
| cd07392 | 188 | MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel | 99.46 | |
| cd07393 | 232 | MPP_DR1119 Deinococcus radiodurans DR1119 and rela | 99.43 | |
| COG1409 | 301 | Icc Predicted phosphohydrolases [General function | 99.4 | |
| cd07400 | 144 | MPP_YydB Bacillus subtilis YydB and related protei | 99.38 | |
| TIGR03729 | 239 | acc_ester putative phosphoesterase. Members of thi | 99.38 | |
| TIGR03768 | 492 | RPA4764 metallophosphoesterase, RPA4764 family. Th | 99.23 | |
| cd07404 | 166 | MPP_MS158 Microscilla MS158 and related proteins, | 99.23 | |
| cd00840 | 223 | MPP_Mre11_N Mre11 nuclease, N-terminal metallophos | 99.19 | |
| cd07388 | 224 | MPP_Tt1561 Thermus thermophilus Tt1561 and related | 99.14 | |
| cd07385 | 223 | MPP_YkuE_C Bacillus subtilis YkuE and related prot | 99.09 | |
| KOG1432 | 379 | consensus Predicted DNA repair exonuclease SIA1 [G | 99.08 | |
| cd00838 | 131 | MPP_superfamily metallophosphatase superfamily, me | 99.06 | |
| cd07389 | 228 | MPP_PhoD Bacillus subtilis PhoD and related protei | 98.97 | |
| PRK11340 | 271 | phosphodiesterase YaeI; Provisional | 98.8 | |
| cd07379 | 135 | MPP_239FB Homo sapiens 239FB and related proteins, | 98.74 | |
| PF12850 | 156 | Metallophos_2: Calcineurin-like phosphoesterase su | 98.72 | |
| PRK05340 | 241 | UDP-2,3-diacylglucosamine hydrolase; Provisional | 98.71 | |
| cd07397 | 238 | MPP_DevT Myxococcus xanthus DevT and related prote | 98.66 | |
| cd08166 | 195 | MPP_Cdc1_like_1 uncharacterized subgroup related t | 98.53 | |
| cd07384 | 171 | MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re | 98.5 | |
| cd08165 | 156 | MPP_MPPE1 human MPPE1 and related proteins, metall | 98.45 | |
| cd00841 | 155 | MPP_YfcE Escherichia coli YfcE and related protein | 98.4 | |
| TIGR00040 | 158 | yfcE phosphoesterase, MJ0936 family. Members of th | 98.37 | |
| cd07403 | 129 | MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel | 98.33 | |
| TIGR01854 | 231 | lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. | 98.3 | |
| cd07394 | 178 | MPP_Vps29 Homo sapiens Vps29 and related proteins, | 98.26 | |
| cd00845 | 252 | MPP_UshA_N_like Escherichia coli UshA-like family, | 98.23 | |
| COG1408 | 284 | Predicted phosphohydrolases [General function pred | 98.21 | |
| TIGR00583 | 405 | mre11 DNA repair protein (mre11). All proteins in | 98.2 | |
| PF14582 | 255 | Metallophos_3: Metallophosphoesterase, calcineurin | 98.17 | |
| cd08164 | 193 | MPP_Ted1 Saccharomyces cerevisiae Ted1 and related | 98.16 | |
| COG2129 | 226 | Predicted phosphoesterases, related to the Icc pro | 98.15 | |
| COG1768 | 230 | Predicted phosphohydrolase [General function predi | 98.13 | |
| KOG3770 | 577 | consensus Acid sphingomyelinase and PHM5 phosphate | 98.12 | |
| KOG3662 | 410 | consensus Cell division control protein/predicted | 98.11 | |
| cd07410 | 277 | MPP_CpdB_N Escherichia coli CpdB and related prote | 98.02 | |
| cd07398 | 217 | MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat | 98.0 | |
| cd07406 | 257 | MPP_CG11883_N Drosophila melanogaster CG11883 and | 97.96 | |
| cd07412 | 288 | MPP_YhcR_N Bacillus subtilis YhcR endonuclease and | 97.9 | |
| cd07382 | 255 | MPP_DR1281 Deinococcus radiodurans DR1281 and rela | 97.85 | |
| cd07411 | 264 | MPP_SoxB_N Thermus thermophilus SoxB and related p | 97.84 | |
| TIGR00619 | 253 | sbcd exonuclease SbcD. This family is based on the | 97.81 | |
| COG0420 | 390 | SbcD DNA repair exonuclease [DNA replication, reco | 97.72 | |
| cd07408 | 257 | MPP_SA0022_N Staphylococcus aureus SA0022 and rela | 97.72 | |
| TIGR00282 | 266 | metallophosphoesterase, MG_246/BB_0505 family. A m | 97.64 | |
| PRK10966 | 407 | exonuclease subunit SbcD; Provisional | 97.54 | |
| PRK09453 | 182 | phosphodiesterase; Provisional | 97.49 | |
| PHA02546 | 340 | 47 endonuclease subunit; Provisional | 97.47 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.44 | |
| COG0737 | 517 | UshA 5'-nucleotidase/2',3'-cyclic phosphodiesteras | 97.4 | |
| cd07407 | 282 | MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and | 97.34 | |
| cd07391 | 172 | MPP_PF1019 Pyrococcus furiosus PF1019 and related | 97.3 | |
| cd07409 | 281 | MPP_CD73_N CD73 ecto-5'-nucleotidase and related p | 97.2 | |
| cd07405 | 285 | MPP_UshA_N Escherichia coli UshA and related prote | 97.07 | |
| TIGR00024 | 225 | SbcD_rel_arch putative phosphoesterase, SbcD/Mre11 | 96.9 | |
| PRK09558 | 551 | ushA bifunctional UDP-sugar hydrolase/5'-nucleotid | 96.81 | |
| PF00041 | 85 | fn3: Fibronectin type III domain; InterPro: IPR003 | 96.78 | |
| COG2908 | 237 | Uncharacterized protein conserved in bacteria [Fun | 96.78 | |
| PHA02239 | 235 | putative protein phosphatase | 96.75 | |
| COG0622 | 172 | Predicted phosphoesterase [General function predic | 96.47 | |
| PRK04036 | 504 | DNA polymerase II small subunit; Validated | 96.46 | |
| cd07424 | 207 | MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do | 96.42 | |
| cd07423 | 234 | MPP_PrpE Bacillus subtilis PrpE and related protei | 96.29 | |
| PRK00166 | 275 | apaH diadenosine tetraphosphatase; Reviewed | 96.22 | |
| PRK13625 | 245 | bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision | 96.22 | |
| TIGR01530 | 550 | nadN NAD pyrophosphatase/5'-nucleotidase NadN. Thi | 96.2 | |
| cd07386 | 243 | MPP_DNA_pol_II_small_archeal_C archeal DNA polymer | 96.12 | |
| cd08162 | 313 | MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA | 96.1 | |
| cd00844 | 262 | MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t | 96.09 | |
| cd07390 | 168 | MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro | 95.97 | |
| COG1407 | 235 | Predicted ICC-like phosphoesterases [General funct | 95.95 | |
| PRK11907 | 814 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 95.86 | |
| PRK09968 | 218 | serine/threonine-specific protein phosphatase 2; P | 95.77 | |
| cd07425 | 208 | MPP_Shelphs Shewanella-like phosphatases, metallop | 95.5 | |
| cd07413 | 222 | MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat | 95.36 | |
| cd07387 | 257 | MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2 | 95.25 | |
| PRK11439 | 218 | pphA serine/threonine protein phosphatase 1; Provi | 95.25 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 95.03 | |
| cd07421 | 304 | MPP_Rhilphs Rhilph phosphatases, metallophosphatas | 94.92 | |
| cd00144 | 225 | MPP_PPP_family phosphoprotein phosphatases of the | 94.92 | |
| COG1692 | 266 | Calcineurin-like phosphoesterase [General function | 94.91 | |
| cd07422 | 257 | MPP_ApaH Escherichia coli ApaH and related protein | 94.82 | |
| KOG2863 | 456 | consensus RNA lariat debranching enzyme [RNA proce | 94.74 | |
| PRK09418 | 780 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 94.55 | |
| KOG2310 | 646 | consensus DNA repair exonuclease MRE11 [Replicatio | 94.43 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 94.42 | |
| cd07381 | 239 | MPP_CapA CapA and related proteins, metallophospha | 93.7 | |
| KOG4221 | 1381 | consensus Receptor mediating netrin-dependent axon | 93.54 | |
| TIGR00668 | 279 | apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric | 93.54 | |
| COG5555 | 392 | Cytolysin, a secreted calcineurin-like phosphatase | 93.51 | |
| cd00063 | 93 | FN3 Fibronectin type 3 domain; One of three types | 93.43 | |
| TIGR01390 | 626 | CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphod | 93.26 | |
| PF09587 | 250 | PGA_cap: Bacterial capsule synthesis protein PGA_c | 93.07 | |
| smart00060 | 83 | FN3 Fibronectin type 3 domain. One of three types | 92.63 | |
| PF13277 | 253 | YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C. | 92.05 | |
| PRK09420 | 649 | cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosp | 91.82 | |
| COG4186 | 186 | Predicted phosphoesterase or phosphohydrolase [Gen | 91.36 | |
| cd07416 | 305 | MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca | 91.36 | |
| cd07420 | 321 | MPP_RdgC Drosophila melanogaster RdgC and related | 91.13 | |
| smart00156 | 271 | PP2Ac Protein phosphatase 2A homologues, catalytic | 90.61 | |
| smart00854 | 239 | PGA_cap Bacterial capsule synthesis protein PGA_ca | 89.81 | |
| cd07415 | 285 | MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein | 89.57 | |
| cd07414 | 293 | MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme | 89.08 | |
| PTZ00239 | 303 | serine/threonine protein phosphatase 2A; Provision | 88.18 | |
| cd07418 | 377 | MPP_PP7 PP7, metallophosphatase domain. PP7 is a p | 88.18 | |
| cd07380 | 150 | MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re | 87.82 | |
| PTZ00480 | 320 | serine/threonine-protein phosphatase; Provisional | 87.02 | |
| cd07417 | 316 | MPP_PP5_C PP5, C-terminal metallophosphatase domai | 86.38 | |
| PTZ00244 | 294 | serine/threonine-protein phosphatase PP1; Provisio | 85.98 | |
| cd07419 | 311 | MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a | 85.91 | |
| KOG3513 | 1051 | consensus Neural cell adhesion molecule L1 [Signal | 85.79 | |
| COG1311 | 481 | HYS2 Archaeal DNA polymerase II, small subunit/DNA | 83.69 | |
| PRK10301 | 124 | hypothetical protein; Provisional | 82.17 | |
| KOG4221 | 1381 | consensus Receptor mediating netrin-dependent axon | 80.49 |
| >KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-89 Score=687.04 Aligned_cols=414 Identities=39% Similarity=0.611 Sum_probs=367.8
Q ss_pred ccCCCCCcccccCCCCCccCcCCCCcccccCCCCCCCceEEEeeecCCCCcEEEEEEcCCCCCCcEEEEeecCCCC----
Q 012311 23 NGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVHITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKF---- 98 (466)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~P~qv~lt~~~~~~~~~~V~W~t~~~~~~~~V~yg~~~~~~---- 98 (466)
..|++|.++++.|...++..|+.++.++..|.+.+.|+||||++++.. ++|+|+|+|.+.. .+.|+||+..+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~peQvhlS~~~~~-~~m~VswvT~~~~-~~~V~Yg~~~~~~~~~~ 86 (452)
T KOG1378|consen 9 SEINPKHTLHDINPLPGTLHLLSESEQLTFPSVVNSPEQVHLSFTDNL-NEMRVSWVTGDGE-ENVVRYGEVKDKLDNSA 86 (452)
T ss_pred eeccCCCccccccccCcccccccccccccCcccCCCCCeEEEeccCCC-CcEEEEEeCCCCC-CceEEEeecCCCccccc
Confidence 568999999999999999999999988999999999999999999875 4999999999753 4999999876652
Q ss_pred -ceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEEEeccC-CccceEEEECCCCCCCCCCeEEEEEccCCCCCCcHH
Q 012311 99 -DFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGSG-DSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLS 176 (466)
Q Consensus 99 -~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Yrv~~~-~~s~~~~F~T~p~~g~~~~~~f~v~GD~g~~~~~~~ 176 (466)
...+++.+..|...+++++++|+|+|++|+|+|+||||||++ .||++++|+|+| +++.+.+|+++||+|.++....
T Consensus 87 ~~~~~~~~~~~y~~~~~~sg~ih~~~~~~L~~~t~YyY~~Gs~~~wS~~f~F~t~p--~~~~~~~~~i~GDlG~~~~~~s 164 (452)
T KOG1378|consen 87 ARGMTEAWTDGYANGWRDSGYIHDAVMKNLEPNTRYYYQVGSDLKWSEIFSFKTPP--GQDSPTRAAIFGDMGCTEPYTS 164 (452)
T ss_pred cccceEEEecccccccceeeeEeeeeecCCCCCceEEEEeCCCCCcccceEeECCC--CccCceeEEEEccccccccccc
Confidence 234445555555556899999999999999999999999997 589999999999 3458999999999999998888
Q ss_pred HHHHHHHh-CCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCceeeccCcCCccccccccccccc
Q 012311 177 TLEHYMES-GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYP 255 (466)
Q Consensus 177 tl~~~~~~-~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~~~~~~~~~~~~f~~y~~rf~ 255 (466)
++.++.++ ++|+|||+||++|++++.+ .+||+|++++||+++.+|||++.||||+++.+.. +|.+|.+||.
T Consensus 165 ~~~~~~~~~k~d~vlhiGDlsYa~~~~n----~~wD~f~r~vEp~As~vPymv~~GNHE~d~~~~~----~F~~y~~Rf~ 236 (452)
T KOG1378|consen 165 TLRNQEENLKPDAVLHIGDLSYAMGYSN----WQWDEFGRQVEPIASYVPYMVCSGNHEIDWPPQP----CFVPYSARFN 236 (452)
T ss_pred hHhHHhcccCCcEEEEecchhhcCCCCc----cchHHHHhhhhhhhccCceEEecccccccCCCcc----cccccceeec
Confidence 88888887 5999999999999998742 6999999999999999999999999999976543 6999999999
Q ss_pred CCCCCCCCCCCceEEEeeCCEEEEEEcCCCCCC--CChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCc-ccccCH
Q 012311 256 TPHLASKSSSPLWYAIRRASAHIIVLSSYSPFV--KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEA-HFMEGE 332 (466)
Q Consensus 256 ~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~~~--~~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~-h~~~~~ 332 (466)
||.+++++..++|||||+|+||||+|+|+.+++ ++.+|++||++||++++|+++||+||++|+|||+++.. |+++++
T Consensus 237 mP~~~s~s~~~l~YSfd~G~vhfv~lsse~~~~~~~~~~QY~WL~~dL~~v~r~~tPWlIv~~HrP~Y~S~~~~~~reG~ 316 (452)
T KOG1378|consen 237 MPGNSSESDSNLYYSFDVGGVHFVVLSTETYYNFLKGTAQYQWLERDLASVDRKKTPWLIVQGHRPMYCSSNDAHYREGE 316 (452)
T ss_pred cCCCcCCCCCceeEEEeeccEEEEEEeccccccccccchHHHHHHHHHHHhcccCCCeEEEEecccceecCCchhhccCc
Confidence 999998888899999999999999999998864 57899999999999999877999999999999998875 788887
Q ss_pred --HHHHHHHHHHHHcCCcEEEeccccee------cCCcc------cccCCCCCcEEEEeCCCCCCCCCCCCCCCCCCCcc
Q 012311 333 --SMRAAFESWFVRYKVDYRISNLHYNI------SSGDC------FPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYS 398 (466)
Q Consensus 333 --~~r~~l~~ll~~y~Vd~~~~gh~~~~------~~~~~------~~~~~~~g~vyiv~G~gG~~~~~~~~~~~~~p~~s 398 (466)
.||..||+||.+||||++++||.|.+ .|.+| .++.+++|||||++|+||+.++++..+ .+||+||
T Consensus 317 ~~~~~~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~~~~~~~~~~~d~~aPvyI~~G~~G~~e~~~~~~-~~~p~~S 395 (452)
T KOG1378|consen 317 FESMREGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTCGTGWGPVHLVDGMAPIYITVGDGGNHEHLDPFS-SPQPEWS 395 (452)
T ss_pred chhhHHHHHHHHHHhceeEEEeccceehhccchhhcceeeccCCcccccCCCCCEEEEEccCCcccccCccc-CCCCccc
Confidence 89999999999999999999998753 34443 456799999999999999999987654 4899999
Q ss_pred ceeeCcccEEEEEEecCCeEEEEEEEcCCCceeeeeeEEEEecccCChhhh
Q 012311 399 AFREASYGHSTLEIKNRTHAFYHWNRNDDGKKVATDSFILHNQYWASNRRR 449 (466)
Q Consensus 399 a~~~~~~G~~~l~v~n~t~l~~~~~~~~dg~~~~~D~~~i~k~~~~~~~~~ 449 (466)
+||+++|||++|+|+|+||+.|+|++|.|++.++.|+|||.|+++.+....
T Consensus 396 a~R~~dfG~~~L~v~N~TH~~~~~~~~~d~~g~~~D~fwl~k~~~~~~~~~ 446 (452)
T KOG1378|consen 396 AFREGDFGYTRLTAKNGTHAHVHWVRNSDASGVVIDSFWLIKDYRDMVVGV 446 (452)
T ss_pred ccccccCCeEEEEEecCceEEEEEEeccCCCceEeeeEEEEcccCcccccc
Confidence 999999999999999999999999999888777899999999999877653
|
|
| >PLN02533 probable purple acid phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-82 Score=657.16 Aligned_cols=405 Identities=38% Similarity=0.640 Sum_probs=349.4
Q ss_pred ccCCCCCcccccCCCCCccCcCCCCcccccCCCCCCCceEEEeeecCCCCcEEEEEEcCCCCCCcEEEEeecCCCCceEE
Q 012311 23 NGGSAGITSKFIRTEWPSIDIPLDNEAFAVPKGHNSPQQVHITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTA 102 (466)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~P~qv~lt~~~~~~~~~~V~W~t~~~~~~~~V~yg~~~~~~~~~a 102 (466)
..|.+|.+.+|+|++...+.+++... ++....|+||||++++ .++|+|+|.|.+. ..+.|+||++++.+..++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~P~qvhls~~~--~~~m~V~W~T~~~-~~~~V~yG~~~~~l~~~a 84 (427)
T PLN02533 12 LIVLAGNVLSYDRPGTRKNLVIHPDN----EDDPTHPDQVHISLVG--PDKMRISWITQDS-IPPSVVYGTVSGKYEGSA 84 (427)
T ss_pred HhhhccCcccccCCCccccccccccC----CCCCCCCceEEEEEcC--CCeEEEEEECCCC-CCCEEEEecCCCCCcceE
Confidence 34667799999999766655544321 2345789999999996 4799999999964 568999999999999999
Q ss_pred EeEEEEeee-eccccceEEEEEecCCCCCCEEEEEeccCCccceEEEECCCCCCCCCCeEEEEEccCCCCCCcHHHHHHH
Q 012311 103 EGTVNNYTF-YKYKSGYIHQCLVDGLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHY 181 (466)
Q Consensus 103 ~g~~~~y~~-~~~~~~~~h~v~l~gL~P~T~Y~Yrv~~~~~s~~~~F~T~p~~g~~~~~~f~v~GD~g~~~~~~~tl~~~ 181 (466)
.|++++|++ ..+.++++|+|+|+||+|+|+|+||||...+|++++|+|+|. ..++||+++||+|.+.....+++++
T Consensus 85 ~g~~~~~~~~~~~~~g~iH~v~l~~L~p~T~Y~Yrvg~~~~s~~~~F~T~p~---~~~~~f~v~GDlG~~~~~~~tl~~i 161 (427)
T PLN02533 85 NGTSSSYHYLLIYRSGQINDVVIGPLKPNTVYYYKCGGPSSTQEFSFRTPPS---KFPIKFAVSGDLGTSEWTKSTLEHV 161 (427)
T ss_pred EEEEEEEeccccccCCeEEEEEeCCCCCCCEEEEEECCCCCccceEEECCCC---CCCeEEEEEEeCCCCcccHHHHHHH
Confidence 999988875 346789999999999999999999999877789999999986 3689999999999877777788898
Q ss_pred HHhCCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCceeeccCcCCcccccccccccccCCCCCC
Q 012311 182 MESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLAS 261 (466)
Q Consensus 182 ~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~~~~ 261 (466)
.+.+|||||++||++|+++. +.+||.|++.++++++.+|+|+++||||.+..+.. ....|..|.+||.||.+++
T Consensus 162 ~~~~pD~vl~~GDl~y~~~~-----~~~wd~f~~~i~~l~s~~P~m~~~GNHE~~~~~~~-~~~~f~~y~~rf~mP~~~~ 235 (427)
T PLN02533 162 SKWDYDVFILPGDLSYANFY-----QPLWDTFGRLVQPLASQRPWMVTHGNHELEKIPIL-HPEKFTAYNARWRMPFEES 235 (427)
T ss_pred HhcCCCEEEEcCccccccch-----HHHHHHHHHHhhhHhhcCceEEeCccccccccccc-cCcCccchhhcccCCcccc
Confidence 88899999999999998654 68999999999999999999999999998754321 1235788999999998877
Q ss_pred CCCCCceEEEeeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCccccc--CHHHHHHHH
Q 012311 262 KSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFME--GESMRAAFE 339 (466)
Q Consensus 262 ~~~~~~yYsf~~g~v~fI~Lds~~~~~~~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~~--~~~~r~~l~ 339 (466)
+...+.||||++|++|||+||++.++....+|++||+++|++++|+++||+||++|+|+|+++..|..+ ...+|+.|+
T Consensus 236 g~~~~~yYSfd~g~vhfI~Lds~~~~~~~~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P~y~s~~~~~~~~~~~~~r~~le 315 (427)
T PLN02533 236 GSTSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESVGMKESME 315 (427)
T ss_pred CCCCCceEEEEECCEEEEEEeCCccccCchHHHHHHHHHHHhhcccCCCEEEEEeCCCeeecccccCCcchhHHHHHHHH
Confidence 777889999999999999999998887789999999999999988889999999999999987655433 245899999
Q ss_pred HHHHHcCCcEEEecccceec------CCcccccCCCCCcEEEEeCCCCCCCCCCCCCCCCCCCccceeeCcccEEEEEEe
Q 012311 340 SWFVRYKVDYRISNLHYNIS------SGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIK 413 (466)
Q Consensus 340 ~ll~~y~Vd~~~~gh~~~~~------~~~~~~~~~~~g~vyiv~G~gG~~~~~~~~~~~~~p~~sa~~~~~~G~~~l~v~ 413 (466)
+||++|+||++++||.|.+. ++. .+++||+|||+|+||+.+++...+.+++|+||+||+.+|||++|+|.
T Consensus 316 ~Ll~~~~VdlvlsGH~H~YeR~~p~~~~~----~~~~gpvyiv~G~gG~~e~~~~~~~~~~~~~s~~r~~~~G~~~l~v~ 391 (427)
T PLN02533 316 TLLYKARVDLVFAGHVHAYERFDRVYQGK----TDKCGPVYITIGDGGNREGLATKYIDPKPDISLFREASFGHGQLNVV 391 (427)
T ss_pred HHHHHhCCcEEEecceecccccccccCCc----cCCCCCEEEEeCCCccccccccccCCCCCCceeEEeccCCEEEEEEE
Confidence 99999999999999998653 343 36789999999999999988767778899999999999999999999
Q ss_pred cCCeEEEEEEEcCCCceeeeeeEEEEecccCChh
Q 012311 414 NRTHAFYHWNRNDDGKKVATDSFILHNQYWASNR 447 (466)
Q Consensus 414 n~t~l~~~~~~~~dg~~~~~D~~~i~k~~~~~~~ 447 (466)
|.|||+|+|++|+||+.++.|+|||.|-...|.+
T Consensus 392 n~t~l~~~~~~~~~~~~~~~D~~~i~~~~~~~~~ 425 (427)
T PLN02533 392 DANTMEWTWHRNDDDQSVASDSVWLKSLLTEPGC 425 (427)
T ss_pred cCCeEEEEEEecCCCCceeeeEEEEEeccCCCcc
Confidence 9999999999999997667999999998766554
|
|
| >cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-46 Score=370.57 Aligned_cols=275 Identities=43% Similarity=0.769 Sum_probs=218.2
Q ss_pred CCCeEEEEEccCCCC-CCcHHHHHHHHH--hCCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCc
Q 012311 157 DASYKFGIIGDLGQT-YNSLSTLEHYME--SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNH 233 (466)
Q Consensus 157 ~~~~~f~v~GD~g~~-~~~~~tl~~~~~--~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNH 233 (466)
+.++||+++||+|.. ..+..+++++.+ .+|||||++||++|+++... ..+|+.|++.++++.+.+|+++++|||
T Consensus 2 ~~~~~f~v~gD~~~~~~~~~~~~~~l~~~~~~~d~vl~~GDl~~~~~~~~---~~~~~~~~~~~~~~~~~~P~~~~~GNH 78 (294)
T cd00839 2 DTPFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYADGYNN---GSRWDTFMRQIEPLASYVPYMVTPGNH 78 (294)
T ss_pred CCcEEEEEEEECCCCCCCcHHHHHHHHhccCCccEEEEcCchhhhcCCcc---chhHHHHHHHHHHHHhcCCcEEcCccc
Confidence 468999999999973 456788888887 59999999999999876532 368999999999999999999999999
Q ss_pred eeeccCcCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCCCC---CCChHHHHHHHHHHhhccCCCCC
Q 012311 234 EIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPF---VKYTPQWEWLREELKKVDREKTP 310 (466)
Q Consensus 234 E~~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~~---~~~~~Q~~WL~~~L~~~~r~~~~ 310 (466)
|........ ....+..++.++........+.||+|++|++|||+|||+... ....+|++||+++|+++++.+++
T Consensus 79 D~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~~~~q~~WL~~~L~~~~~~~~~ 155 (294)
T cd00839 79 EADYNFSFY---KIKAFFPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDWLEADLAKVDRSKTP 155 (294)
T ss_pred ccccCCCCc---ccccccccccccCCCCCCCCCceEEEeeCCEEEEEEecccccccCCCCcHHHHHHHHHHHHhcccCCC
Confidence 987532110 011111233444444445668899999999999999998654 45789999999999998766789
Q ss_pred eEEEEeccccccCCCcccc--cCHHHHHHHHHHHHHcCCcEEEecccceec------CCc----ccccCCCCCcEEEEeC
Q 012311 311 WLIVLMHVPIYNSNEAHFM--EGESMRAAFESWFVRYKVDYRISNLHYNIS------SGD----CFPVPDKSAPVYITVG 378 (466)
Q Consensus 311 w~IV~~H~P~y~s~~~h~~--~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~~------~~~----~~~~~~~~g~vyiv~G 378 (466)
|+||++|+|+|++...+.. .....++.|++||.+|+|+++++||.|.+. ++. +..+.+++|++||++|
T Consensus 156 ~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~~~~~~~~~~~~~g~~yiv~G 235 (294)
T cd00839 156 WIIVMGHRPMYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVVGDCNPYSNPKGPVHIVIG 235 (294)
T ss_pred eEEEEeccCcEecCccccccchhHHHHHHHHHHHHHhCCCEEEEccceeeEeechhhCCEeccccccccCCCccEEEEEC
Confidence 9999999999987654322 246789999999999999999999998643 222 1234578999999999
Q ss_pred CCCCCCCCCCCCCCCCCCccceeeCcccEEEEEEecCCeEEEEEEEcCCCceeeeeeEEEEe
Q 012311 379 DGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGKKVATDSFILHN 440 (466)
Q Consensus 379 ~gG~~~~~~~~~~~~~p~~sa~~~~~~G~~~l~v~n~t~l~~~~~~~~dg~~~~~D~~~i~k 440 (466)
+||+.++..... .+.|+|++++...+||++|+|.|+|+|+++|+++.+|++ .|+|+|.|
T Consensus 236 ~~G~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~t~l~~~~~~~~~g~v--~D~f~i~k 294 (294)
T cd00839 236 AGGNDEGLDPFS-APPPAWSAFRESDYGFGRLTVHNSTHLHFEWIRNDDGVV--IDSFWIIK 294 (294)
T ss_pred CCccccCcCccc-CCCCCceEEEeccCCEEEEEEEecCeEEEEEEECCCCeE--EEEEEEeC
Confidence 999987643221 223689999999999999999998899999999899975 89999986
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver |
| >PTZ00422 glideosome-associated protein 50; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=296.92 Aligned_cols=265 Identities=16% Similarity=0.262 Sum_probs=194.0
Q ss_pred EECCCCCCCCCCeEEEEEccCCCCCCcHHHHHH----HHHh-CCCEEEEcccccccccccccccchhHHH-HHHHHHHHh
Q 012311 148 FQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEH----YMES-GAQTVLFLGDLSYADRYQFIDVGVRWDS-WGRFVERSA 221 (466)
Q Consensus 148 F~T~p~~g~~~~~~f~v~GD~g~~~~~~~tl~~----~~~~-~~dfvl~~GDl~Y~~~~~~~d~~~~wd~-~~~~~~~l~ 221 (466)
|-+.+.. +..++|+++||+|.+...+..+++ +.++ ++||||.+||++ .+|..+.+ +++|.+ |.+.+....
T Consensus 17 ~~~~~~~--~~~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF-~~Gv~sv~-Dp~f~~~FE~vY~~~s 92 (394)
T PTZ00422 17 FISSYSV--KAQLRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNF-PGGVDGLN-DPKWKHCFENVYSEES 92 (394)
T ss_pred EEeeccc--CCeEEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccc-cCCCCCcc-chhHHhhHhhhccCcc
Confidence 4444433 468999999999976555554443 3334 899999999998 56665555 678877 444444433
Q ss_pred --hcCCeEEcCCCceeeccCcCCccccc------------------ccccccccCCCCCCCCCCCceEEE----ee----
Q 012311 222 --AYQPWIWSAGNHEIEYMTYMGEVVPF------------------KSYLHRYPTPHLASKSSSPLWYAI----RR---- 273 (466)
Q Consensus 222 --~~~P~~~~~GNHE~~~~~~~~~~~~f------------------~~y~~rf~~P~~~~~~~~~~yYsf----~~---- 273 (466)
..+||++++||||+..+... ....+ .....||.|| +.||++ ..
T Consensus 93 ~~L~~Pwy~vLGNHDy~Gn~~A-Qi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP--------~~yY~~~~~f~~~~~~ 163 (394)
T PTZ00422 93 GDMQIPFFTVLGQADWDGNYNA-ELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMP--------NYWYHYFTHFTDTSGP 163 (394)
T ss_pred hhhCCCeEEeCCcccccCCchh-hhccccccccccccccccccccccccCCCccCC--------chhheeeeeeeccccc
Confidence 57999999999998644211 00001 0123689999 468854 22
Q ss_pred ---------CCEEEEEEcCCC-----CCC-CChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCcccccCHHHHHHH
Q 012311 274 ---------ASAHIIVLSSYS-----PFV-KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAF 338 (466)
Q Consensus 274 ---------g~v~fI~Lds~~-----~~~-~~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l 338 (466)
..|.||+|||.. ++. ....|++||+++|+.+ ++.++|+||++|||+|+++. | .+..+++..|
T Consensus 164 ~~~~~~~~~~~v~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a-~k~a~WkIVvGHhPIySsG~-h-g~~~~L~~~L 240 (394)
T PTZ00422 164 SLLKSGHKDMSVAFIFIDTWILSSSFPYKKVSERAWQDLKATLEYA-PKIADYIIVVGDKPIYSSGS-S-KGDSYLSYYL 240 (394)
T ss_pred ccccccCCCCEEEEEEEECchhcccCCccccCHHHHHHHHHHHHhh-ccCCCeEEEEecCceeecCC-C-CCCHHHHHHH
Confidence 238999999953 122 2468999999999754 35788999999999999886 4 2456799999
Q ss_pred HHHHHHcCCcEEEecccceecCCcccccCCCCCcEEEEeCCCCCCCCCCCCCCCCCCCccceeeCcccEEEEEEecCCeE
Q 012311 339 ESWFVRYKVDYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHA 418 (466)
Q Consensus 339 ~~ll~~y~Vd~~~~gh~~~~~~~~~~~~~~~~g~vyiv~G~gG~~~~~~~~~~~~~p~~sa~~~~~~G~~~l~v~n~t~l 418 (466)
+|||++|+||++++||+|+++. ...+++.||++|+||+..+.. . ..++++.|....+||+.+++ +.+.+
T Consensus 241 ~PLL~ky~VdlYisGHDH~lq~------i~~~gt~yIvSGaGs~~~~~~---~-~~~~~s~F~~~~~GF~~~~l-~~~~l 309 (394)
T PTZ00422 241 LPLLKDAQVDLYISGYDRNMEV------LTDEGTAHINCGSGGNSGRKS---I-MKNSKSLFYSEDIGFCIHEL-NAEGM 309 (394)
T ss_pred HHHHHHcCcCEEEEccccceEE------ecCCCceEEEeCccccccCCC---C-CCCCCcceecCCCCEEEEEE-ecCEE
Confidence 9999999999999999998753 134689999999999865421 1 23457889888999999998 67789
Q ss_pred EEEEEEcCCCceeeeeeEEEEec
Q 012311 419 FYHWNRNDDGKKVATDSFILHNQ 441 (466)
Q Consensus 419 ~~~~~~~~dg~~~~~D~~~i~k~ 441 (466)
+++++++.+|++ ++++++.++
T Consensus 310 ~~~fid~~~Gkv--L~~~~~~~~ 330 (394)
T PTZ00422 310 VTKFVSGNTGEV--LYTHKQPLK 330 (394)
T ss_pred EEEEEeCCCCcE--EEEeeeccc
Confidence 999997679996 799888664
|
|
| >cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-33 Score=273.52 Aligned_cols=247 Identities=21% Similarity=0.362 Sum_probs=176.8
Q ss_pred eEEEEEccCCCC-CCcHH----HHHHHHH-hCCCEEEEcccccccccccccccchhH-HHHHHHHHHHhhcCCeEEcCCC
Q 012311 160 YKFGIIGDLGQT-YNSLS----TLEHYME-SGAQTVLFLGDLSYADRYQFIDVGVRW-DSWGRFVERSAAYQPWIWSAGN 232 (466)
Q Consensus 160 ~~f~v~GD~g~~-~~~~~----tl~~~~~-~~~dfvl~~GDl~Y~~~~~~~d~~~~w-d~~~~~~~~l~~~~P~~~~~GN 232 (466)
+||+++||+|.. ..... .+.++.+ .+|||||++||++|+++....+ +.+| +.|.+.++.+...+|+++++||
T Consensus 1 ~~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~-~~~~~~~~~~~~~~~~~~~P~~~v~GN 79 (277)
T cd07378 1 LRFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVD-DPRFETTFEDVYSAPSLQVPWYLVLGN 79 (277)
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCc-chHHHHHHHHHccchhhcCCeEEecCC
Confidence 489999999986 23222 2333444 4999999999999988754332 3444 3455555555468999999999
Q ss_pred ceeeccCcCCccccccc--ccccccCCCCCCCCCCCceEEEeeC------CEEEEEEcCCCCC---------------CC
Q 012311 233 HEIEYMTYMGEVVPFKS--YLHRYPTPHLASKSSSPLWYAIRRA------SAHIIVLSSYSPF---------------VK 289 (466)
Q Consensus 233 HE~~~~~~~~~~~~f~~--y~~rf~~P~~~~~~~~~~yYsf~~g------~v~fI~Lds~~~~---------------~~ 289 (466)
||...+. .....+.. +..+|.+| ..||+|+++ +++||+|||.... ..
T Consensus 80 HD~~~~~--~~~~~~~~~~~~~~~~~~--------~~~y~~~~~~~~~~~~~~~i~LDt~~~~~~~~~~~~~~~~~~~~~ 149 (277)
T cd07378 80 HDYSGNV--SAQIDYTKRPNSPRWTMP--------AYYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIASPYGPPNGKL 149 (277)
T ss_pred cccCCCc--hheeehhccCCCCCccCc--------chheEEEeecCCCCCEEEEEEEeChhHcCccccccccccCcchhh
Confidence 9986421 11111111 23445555 479999998 7999999996421 13
Q ss_pred ChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccceecCCcccccCCC
Q 012311 290 YTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYNISSGDCFPVPDK 369 (466)
Q Consensus 290 ~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~~~~~~~~~~~~ 369 (466)
..+|++||+++|+++ ..+|+||++|+|+++... +. ....+++.|+++|.+|+|+++++||.|...... .+.
T Consensus 150 ~~~Q~~wL~~~L~~~---~~~~~iv~~H~P~~~~~~-~~-~~~~~~~~l~~l~~~~~v~~vl~GH~H~~~~~~----~~~ 220 (277)
T cd07378 150 AEEQLAWLEKTLAAS---TADWKIVVGHHPIYSSGE-HG-PTSCLVDRLLPLLKKYKVDAYLSGHDHNLQHIK----DDG 220 (277)
T ss_pred HHHHHHHHHHHHHhc---CCCeEEEEeCccceeCCC-CC-CcHHHHHHHHHHHHHcCCCEEEeCCcccceeee----cCC
Confidence 579999999999985 348999999999998654 22 235678999999999999999999998643221 233
Q ss_pred CCcEEEEeCCCCCCCCCCCCCCCCCCCccceeeCcccEEEEEEecCCeEEEEEEEcCCC
Q 012311 370 SAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRNDDG 428 (466)
Q Consensus 370 ~g~vyiv~G~gG~~~~~~~~~~~~~p~~sa~~~~~~G~~~l~v~n~t~l~~~~~~~~dg 428 (466)
.++.||++|+||...+........+|.|+.++...+||++|+|.+ .++.++|+. .||
T Consensus 221 ~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~Gy~~i~v~~-~~l~~~~~~-~~g 277 (277)
T cd07378 221 SGTSFVVSGAGSKARPSVKHIDKVPQFFSGFTSSGGGFAYLELTK-EELTVRFYD-ADG 277 (277)
T ss_pred CCcEEEEeCCCcccCCCCCccCcccccccccccCCCCEEEEEEec-CEEEEEEEC-CCC
Confidence 689999999999876543322233445788888999999999965 579999984 665
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma |
| >KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.2e-27 Score=220.66 Aligned_cols=260 Identities=19% Similarity=0.257 Sum_probs=170.0
Q ss_pred EEECCCCCCCCCCeEEEEEccCCCCCCcHH-----HHHHHHHh-CCCEEEEcccccccccccccccchhHHH-HHHHHHH
Q 012311 147 WFQTPPKIDPDASYKFGIIGDLGQTYNSLS-----TLEHYMES-GAQTVLFLGDLSYADRYQFIDVGVRWDS-WGRFVER 219 (466)
Q Consensus 147 ~F~T~p~~g~~~~~~f~v~GD~g~~~~~~~-----tl~~~~~~-~~dfvl~~GDl~Y~~~~~~~d~~~~wd~-~~~~~~~ 219 (466)
+|.-|+. ++..++|+++||+|......+ .+..+.+. +.||||.+||++|.+|..+.. +++++. |.+....
T Consensus 33 ~l~~p~~--~dgslsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~-Dp~Fq~sF~nIYT~ 109 (336)
T KOG2679|consen 33 RLYDPAK--SDGSLSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSEN-DPRFQDSFENIYTA 109 (336)
T ss_pred hhcCCCC--CCCceEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCC-ChhHHhhhhhcccC
Confidence 4555554 367999999999997653222 12234444 999999999999998876443 455543 3333322
Q ss_pred HhhcCCeEEcCCCceeeccCcCCcccccccccccccCCCCCCCCCCCceEE--E----eeCCEEEEEEcCCC-------C
Q 012311 220 SAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYA--I----RRASAHIIVLSSYS-------P 286 (466)
Q Consensus 220 l~~~~P~~~~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYs--f----~~g~v~fI~Lds~~-------~ 286 (466)
-..+.||+.+.||||+..+....-..-++.-..||..|. .||- + ..-++.++|+|+.. +
T Consensus 110 pSLQkpWy~vlGNHDyrGnV~AQls~~l~~~d~RW~c~r--------sf~~~ae~ve~f~v~~~~f~~d~~~~~~~~~yd 181 (336)
T KOG2679|consen 110 PSLQKPWYSVLGNHDYRGNVEAQLSPVLRKIDKRWICPR--------SFYVDAEIVEMFFVDTTPFMDDTFTLCTDDVYD 181 (336)
T ss_pred cccccchhhhccCccccCchhhhhhHHHHhhccceeccc--------HHhhcceeeeeeccccccchhhheecccccccc
Confidence 223569999999999975432100011344456776663 2331 0 11134455555532 1
Q ss_pred C-C------CChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccceec
Q 012311 287 F-V------KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYNIS 359 (466)
Q Consensus 287 ~-~------~~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~~ 359 (466)
+ + ....|+.||+..|++ +.++|+||++|||+.+.+. | +...+++++|.|||++++||++++||+|.+.
T Consensus 182 w~~v~PR~~~~~~~l~~le~~L~~---S~a~wkiVvGHh~i~S~~~-H-G~T~eL~~~LlPiL~~n~VdlY~nGHDHcLQ 256 (336)
T KOG2679|consen 182 WRGVLPRVKYLRALLSWLEVALKA---SRAKWKIVVGHHPIKSAGH-H-GPTKELEKQLLPILEANGVDLYINGHDHCLQ 256 (336)
T ss_pred cccCChHHHHHHHHHHHHHHHHHH---hhcceEEEecccceehhhc-c-CChHHHHHHHHHHHHhcCCcEEEecchhhhh
Confidence 1 1 135789999999999 7899999999999998764 5 4578899999999999999999999998764
Q ss_pred CCcccccCC-CCCcEEEEeCCCCCCCCCCCCCC-CCCCCccceeeCcccEEEEEEecCCeEEEEEEEcCCCce
Q 012311 360 SGDCFPVPD-KSAPVYITVGDGGNQEGLAGKFR-YPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGKK 430 (466)
Q Consensus 360 ~~~~~~~~~-~~g~vyiv~G~gG~~~~~~~~~~-~~~p~~sa~~~~~~G~~~l~v~n~t~l~~~~~~~~dg~~ 430 (466)
.- .+ .+++-|+++| ||++....+... .-.|+...|....-||+.++| ....+++.|++ ..|++
T Consensus 257 hi-----s~~e~~iqf~tSG-agSkaw~g~~~~~~~~p~~lkF~YdgqGfmsv~i-s~~e~~vvfyD-~~G~~ 321 (336)
T KOG2679|consen 257 HI-----SSPESGIQFVTSG-AGSKAWRGTDHNPEVNPKELKFYYDGQGFMSVEI-SHSEARVVFYD-VSGKV 321 (336)
T ss_pred hc-----cCCCCCeeEEeeC-CcccccCCCccCCccChhheEEeeCCCceEEEEE-ecceeEEEEEe-ccCce
Confidence 32 23 4556666666 455443221111 123444456666779999999 56679999986 78886
|
|
| >PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: |
Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-26 Score=243.08 Aligned_cols=284 Identities=20% Similarity=0.314 Sum_probs=150.3
Q ss_pred EeeecCCCCcEEEEEEcCCC--------CCCcEEEEeec--CCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEE
Q 012311 64 ITQGDYDGKAVIISWVTPHE--------PGPSTVSYGTS--ADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (466)
Q Consensus 64 lt~~~~~~~~~~V~W~t~~~--------~~~~~V~yg~~--~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y 133 (466)
|+.|+ +..+..|.|..-.. ..+..|++..+ +........++..+ +....++++++|+||+|+|+|
T Consensus 3 vasGd-p~~~svilWtR~~~~~~~~~~~~~~~~V~~~va~d~~~~~~~~~~~~~~----~~~~d~t~~v~v~gL~p~t~Y 77 (453)
T PF09423_consen 3 VASGD-PTPDSVILWTRVTPPAAAGGMPKAPVPVRWEVATDPEFSNVVRSGTVTT----TAERDFTVKVDVTGLQPGTRY 77 (453)
T ss_dssp EEEE----SS-EEEEEE--SBGGTB---SS-EEEEEEEESSTTSSSEEEEEEEEE-----GGGTTEEEEEE-S--TT-EE
T ss_pred ccccC-CCCCEEEEEEEecCcccCCCCCCCcEEEEEEEECCCCccceEEecceec----ccCCCeEeecccCCCCCCceE
Confidence 46665 56677888987654 11345555544 43333334444433 346789999999999999999
Q ss_pred EEEeccC---CccceEEEECCCCCCCCCCeEEEEEccCCCCCCcHHHHHHHHH-hCCCEEEEcccccccccc---c----
Q 012311 134 YYKIGSG---DSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYME-SGAQTVLFLGDLSYADRY---Q---- 202 (466)
Q Consensus 134 ~Yrv~~~---~~s~~~~F~T~p~~g~~~~~~f~v~GD~g~~~~~~~tl~~~~~-~~~dfvl~~GDl~Y~~~~---~---- 202 (466)
+||+... ..+++++|||+|... ..++||++++|.+........+.++.+ .+|||+||+||.+|++.. .
T Consensus 78 ~Y~~~~~~~~~~s~~g~~rT~p~~~-~~~~r~a~~SC~~~~~~~~~~~~~~a~~~~~D~~l~lGD~IY~d~~~~~~~~~~ 156 (453)
T PF09423_consen 78 YYRFVVDGGGQTSPVGRFRTAPDGD-PDPFRFAFGSCQNYEDGYFPAYRRIAERDDPDFVLHLGDQIYEDGGGGYGNLSR 156 (453)
T ss_dssp EEEEEE--TTEE---EEEE--TT------EEEEEE----CCC---HHHHHHTT-S--SEEEE-S-SS----TTSS--TT-
T ss_pred EEEEEEecCCCCCCceEEEcCCCCC-CCceEEEEECCCCcccChHHHHHhhhccCCCcEEEEeCCeeeccCCcccccccc
Confidence 9999873 468899999997543 357999999999876656788889988 499999999999999863 0
Q ss_pred ---------------ccccchhHHHH--HHHHHHHhhcCCeEEcCCCceeeccCcC-Ccc------ccc-----cccccc
Q 012311 203 ---------------FIDVGVRWDSW--GRFVERSAAYQPWIWSAGNHEIEYMTYM-GEV------VPF-----KSYLHR 253 (466)
Q Consensus 203 ---------------~~d~~~~wd~~--~~~~~~l~~~~P~~~~~GNHE~~~~~~~-~~~------~~f-----~~y~~r 253 (466)
..++..+|..+ ...++.+.+.+|++.++.+||+.++... ++. ..+ .+++.+
T Consensus 157 ~~~~r~~~p~~~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwDDHdi~nn~~~~~~~~~~~~~~~~~~~~~~a~~ay 236 (453)
T PF09423_consen 157 RPIGRAPEPAHEAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWDDHDIGNNWWGDGAENHQDTSGDFQDRRRAAYQAY 236 (453)
T ss_dssp --S-----SSSS--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---STTTSTT-BTTB-STT---HHHHHHHHHHHHHHH
T ss_pred cccccccccccccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEccCceecccccCCccccccccccchHHHHHHHHHHH
Confidence 00123334433 2456677889999999999999754321 110 011 112222
Q ss_pred cc-CCCCC---CCCCCCceEEEeeCC-EEEEEEcCCCC-----C----------------CCChHHHHHHHHHHhhccCC
Q 012311 254 YP-TPHLA---SKSSSPLWYAIRRAS-AHIIVLSSYSP-----F----------------VKYTPQWEWLREELKKVDRE 307 (466)
Q Consensus 254 f~-~P~~~---~~~~~~~yYsf~~g~-v~fI~Lds~~~-----~----------------~~~~~Q~~WL~~~L~~~~r~ 307 (466)
|. +|... .+.....|++|++|+ +.|++||++.. . -.+.+|++||++.|++ +
T Consensus 237 ~e~~p~r~~~~~~~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~~~~~~~~~~~~~~~~~mLG~~Q~~wL~~~L~~---s 313 (453)
T PF09423_consen 237 FEYQPVRNPDPPGDQGRIYRSFRYGDLVEFFMLDTRSYRSPPPCDGPGDTCPAADDPSRTMLGEEQWDWLEDWLAS---S 313 (453)
T ss_dssp HHHS---GGG-BTTB----EEEEETTTEEEEE--SSSS----CCCSSEE--HHHH-TT--SS-HHHHHHHHHHHHH----
T ss_pred HhhcCccCCCccCCCCceEEEEecCCceeEEEEechhccccccccccccccccccCCccCcCCHHHHHHHHHHHhc---C
Confidence 21 33321 122456899999999 99999999641 1 1368999999999998 5
Q ss_pred CCCeEEEEeccccccCCC-----------cccccCHHHHHHHHHHHHHcCCc--EEEecccc
Q 012311 308 KTPWLIVLMHVPIYNSNE-----------AHFMEGESMRAAFESWFVRYKVD--YRISNLHY 356 (466)
Q Consensus 308 ~~~w~IV~~H~P~y~s~~-----------~h~~~~~~~r~~l~~ll~~y~Vd--~~~~gh~~ 356 (466)
.++|+|+..-.|+..... .++..-...|+.|..+|.+.++. .+++|-.|
T Consensus 314 ~a~~kvi~s~v~~~~~~~~~~~~~~~~~~d~W~g~~~er~~Ll~~l~~~~~~~vV~LSGDvH 375 (453)
T PF09423_consen 314 QATWKVIGSSVPFSPLNFPDAAEGLPFNMDSWDGYPAERQRLLDFLRESGIRNVVFLSGDVH 375 (453)
T ss_dssp -SSEEEEE-SS--S---SS-SS-S--EETTSGGGSHHHHHHHHHHHHHTT---EEEEE-SSS
T ss_pred CCcEEEEEeCCceecccccccccccccCCCchhhCHHHHHHHHHHHHhhCCCCEEEEecCcc
Confidence 699999998887754321 12333467899999999999997 67788665
|
|
| >cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.1e-26 Score=223.80 Aligned_cols=229 Identities=16% Similarity=0.162 Sum_probs=160.0
Q ss_pred CCeEEEEEccCCCCCC--c---------------HHHHHHHHHh--CCCEEEEcccccccccccccccchhHHHHHHHHH
Q 012311 158 ASYKFGIIGDLGQTYN--S---------------LSTLEHYMES--GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVE 218 (466)
Q Consensus 158 ~~~~f~v~GD~g~~~~--~---------------~~tl~~~~~~--~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~ 218 (466)
.+++|++++|+|.+.. . ...++.+.+. +||||+++||++........ ...+|+.+.+.++
T Consensus 3 ~~~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~-~~~~~~~~~~~~~ 81 (262)
T cd07395 3 GPFYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDEL-RERQVSDLKDVLS 81 (262)
T ss_pred CCEEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhh-HHHHHHHHHHHHh
Confidence 5899999999998731 1 1223344455 89999999999975443211 1245666777777
Q ss_pred HHhhcCCeEEcCCCceeeccCcCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCCCC------CCChH
Q 012311 219 RSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPF------VKYTP 292 (466)
Q Consensus 219 ~l~~~~P~~~~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~~------~~~~~ 292 (466)
.+...+|+++++||||+...+. ...+..|...| ++.||+|++|+++||+|||.... ....+
T Consensus 82 ~~~~~vp~~~i~GNHD~~~~~~---~~~~~~f~~~~----------g~~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~ 148 (262)
T cd07395 82 LLDPDIPLVCVCGNHDVGNTPT---EESIKDYRDVF----------GDDYFSFWVGGVFFIVLNSQLFFDPSEVPELAQA 148 (262)
T ss_pred hccCCCcEEEeCCCCCCCCCCC---hhHHHHHHHHh----------CCcceEEEECCEEEEEeccccccCccccccchHH
Confidence 6666799999999999853321 11122333333 24689999999999999995421 13578
Q ss_pred HHHHHHHHHhhccCCCCCeEEEEeccccccCCCccc----ccCHHHHHHHHHHHHHcCCcEEEecccceecCCcccccCC
Q 012311 293 QWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHF----MEGESMRAAFESWFVRYKVDYRISNLHYNISSGDCFPVPD 368 (466)
Q Consensus 293 Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~----~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~~~~~~~~~~~ 368 (466)
|++||+++|+++.+.+.+|+||++|+|++....... ......+++|.++|++++|+.++|||.|..... .
T Consensus 149 ql~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~v~~GH~H~~~~~------~ 222 (262)
T cd07395 149 QDVWLEEQLEIAKESDCKHVIVFQHIPWFLEDPDEEDSYFNIPKSVRKPLLDKFKKAGVKAVFSGHYHRNAGG------R 222 (262)
T ss_pred HHHHHHHHHHHHHhccCCcEEEEECcCCccCCCCCCcccCCcCHHHHHHHHHHHHhcCceEEEECccccCCce------E
Confidence 999999999997545678999999999986443211 123467889999999999999999999853321 2
Q ss_pred CCCcEEEEeCCCCCCCCCCCCCCCCCCCccceeeCcccEEEEEEecCCeEEEEEE
Q 012311 369 KSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWN 423 (466)
Q Consensus 369 ~~g~vyiv~G~gG~~~~~~~~~~~~~p~~sa~~~~~~G~~~l~v~n~t~l~~~~~ 423 (466)
..|+.|++++++|...+ ....||..++|..+ .++++++
T Consensus 223 ~~g~~~~~~~~~~~~~~----------------~~~~g~~~~~v~~~-~~~~~~~ 260 (262)
T cd07395 223 YGGLEMVVTSAIGAQLG----------------NDKSGLRIVKVTED-KIVHEYY 260 (262)
T ss_pred ECCEEEEEcCceecccC----------------CCCCCcEEEEECCC-ceeeeee
Confidence 34788888888775421 12378999999544 4788876
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th |
| >COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-24 Score=217.91 Aligned_cols=286 Identities=19% Similarity=0.250 Sum_probs=201.5
Q ss_pred ceEEEeeecCCCCcEEEEEEcCCC-------CCCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCE
Q 012311 60 QQVHITQGDYDGKAVIISWVTPHE-------PGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (466)
Q Consensus 60 ~qv~lt~~~~~~~~~~V~W~t~~~-------~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~ 132 (466)
.+.-++.|+ +.....|.|..-+. +....+|+.++++.-+.+..|+..+ .....+.+|+.++||+|++.
T Consensus 39 F~~GVaSGD-p~~~svviWTRl~P~p~~~g~~v~V~wEvs~~~~f~~ivr~gt~~a----~p~~dhtv~v~~~gL~P~~~ 113 (522)
T COG3540 39 FTHGVASGD-PTATSVVIWTRLDPEPLNGGRPVPVIWEVSTDENFSNIVRKGTVIA----SPELDHTVHVDLRGLSPDQD 113 (522)
T ss_pred cccccccCC-CCCCeEEEEEccCCccccCCCCcceEEEecCCccHHHHHhcCCccC----CcccCceEEEeccCCCCCce
Confidence 455567675 56788889987541 2345777888776544444555443 23577999999999999999
Q ss_pred EEEEeccC-CccceEEEECCCCCCCCCCeEEEEEccC---CCCCCcHHHHHHHHHhCCCEEEEccccccccccc------
Q 012311 133 YYYKIGSG-DSSREFWFQTPPKIDPDASYKFGIIGDL---GQTYNSLSTLEHYMESGAQTVLFLGDLSYADRYQ------ 202 (466)
Q Consensus 133 Y~Yrv~~~-~~s~~~~F~T~p~~g~~~~~~f~v~GD~---g~~~~~~~tl~~~~~~~~dfvl~~GDl~Y~~~~~------ 202 (466)
|+||+..+ ..|.+++|||+|+++ ..++|+.+||. +...+...+.++|.+.+||||||+||.+|+++..
T Consensus 114 yfYRf~~~~~~spvGrtrTapa~~--~~i~~~~fa~ascQ~~~~gy~~aY~~ma~~~~D~viH~GDyIYeyg~~~~~~~~ 191 (522)
T COG3540 114 YFYRFKAGDERSPVGRTRTAPAPG--RAIRFVWFADASCQGWEIGYMTAYKTMAKEEPDFVIHLGDYIYEYGPIPDEVSL 191 (522)
T ss_pred EEEEEeeCCccccccccccCCCCC--CcchhhhhhhccccccccchhHHHHHHHhcCCCEEEEcCCeeeccCCccccccc
Confidence 99999887 467999999999975 45555555554 4455567788889999999999999999998753
Q ss_pred ----c--------------cccchhHHHH--HHHHHHHhhcCCeEEcCCCceeeccCcCC--c----c--ccc-----cc
Q 012311 203 ----F--------------IDVGVRWDSW--GRFVERSAAYQPWIWSAGNHEIEYMTYMG--E----V--VPF-----KS 249 (466)
Q Consensus 203 ----~--------------~d~~~~wd~~--~~~~~~l~~~~P~~~~~GNHE~~~~~~~~--~----~--~~f-----~~ 249 (466)
+ .||+.+|..+ ...++...+..||++++.+||..++...+ + + +.| .+
T Consensus 192 ~~~~~~~~~~~~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~WDDHEv~NN~~~~~~~nD~~~~~k~~~~r~a~A 271 (522)
T COG3540 192 NSWKNVVVTQHKSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQWDDHEVANNWSNSIDENDSRYDEKDFVLRAAAA 271 (522)
T ss_pred ccccccccCCCCCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEEeccccccccccccccccCCCCChHHHHHHHHHH
Confidence 1 1245555554 35677788899999999999998663211 1 0 011 22
Q ss_pred ccccc-cCCCCCCCC--CCCceEEEeeCC-EEEEEEcCCCCC----------------------CCChHHHHHHHHHHhh
Q 012311 250 YLHRY-PTPHLASKS--SSPLWYAIRRAS-AHIIVLSSYSPF----------------------VKYTPQWEWLREELKK 303 (466)
Q Consensus 250 y~~rf-~~P~~~~~~--~~~~yYsf~~g~-v~fI~Lds~~~~----------------------~~~~~Q~~WL~~~L~~ 303 (466)
++.++ .||...+.. ....|.+|.||+ +.|.+||+++.- -.+..|.+||++.|.+
T Consensus 272 ~qAyyE~mPiR~~~~p~~~~lYR~~tyG~La~~~~LDtR~YR~dqp~~dg~~~~~q~~~~~~~~mlG~~QeqWLk~~L~~ 351 (522)
T COG3540 272 RQAYYEHMPIRYSSLPTDGRLYRSFTYGPLADLFVLDTRSYRTDQPCGDGNPPNCQAVAGSAATMLGEQQEQWLKRGLGA 351 (522)
T ss_pred HHHHHHhCccccccCCccceeeeeeccccccceeeeehhhhccccccCCCCcchhhhhhCccccchhhHHHHHHHhhhhh
Confidence 33332 377664332 257999999998 789999996411 1368999999999999
Q ss_pred ccCCCCCeEEEEeccccccCC--Cc----------ccccC-HHHHHHHHHHHHHcCCc--EEEeccc
Q 012311 304 VDREKTPWLIVLMHVPIYNSN--EA----------HFMEG-ESMRAAFESWFVRYKVD--YRISNLH 355 (466)
Q Consensus 304 ~~r~~~~w~IV~~H~P~y~s~--~~----------h~~~~-~~~r~~l~~ll~~y~Vd--~~~~gh~ 355 (466)
+++.|+|+..-.|+=... .. +..+| ..-|+.|...+.+.++. +++.|-.
T Consensus 352 ---SkatWnVia~q~~~~~~~~d~~~a~~~~~a~~D~wdGy~~~RerLl~fi~~~~~~N~V~LtgDv 415 (522)
T COG3540 352 ---SKATWNVIAQQMPLGLVVFDGSPATEGQEANADGWDGYPAGRERLLRFIADRKIRNTVVLTGDV 415 (522)
T ss_pred ---cchhhhhhhhhcceeEeecCCCccccCccccccCcCCCcccHHHHHHHHHhcCCCCcEEEechh
Confidence 899999998888762111 00 01122 34588999999999998 6777743
|
|
| >cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.7e-22 Score=194.46 Aligned_cols=216 Identities=18% Similarity=0.180 Sum_probs=148.9
Q ss_pred EEEEEccCCCCCCc---------H----HHHHHHHHh--CCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCC
Q 012311 161 KFGIIGDLGQTYNS---------L----STLEHYMES--GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQP 225 (466)
Q Consensus 161 ~f~v~GD~g~~~~~---------~----~tl~~~~~~--~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P 225 (466)
||++++|+|.+... . ..++.+.+. +||+||++||++.... ...|..+.+.++.+ .+|
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~------~~~~~~~~~~l~~~--~~p 72 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGS------PESYERLRELLAAL--PIP 72 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCC------HHHHHHHHHHHhhc--CCC
Confidence 69999999987531 2 234445555 8999999999996422 34556666666665 789
Q ss_pred eEEcCCCceeeccCcCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCCCC---C-CChHHHHHHHHHH
Q 012311 226 WIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPF---V-KYTPQWEWLREEL 301 (466)
Q Consensus 226 ~~~~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~~---~-~~~~Q~~WL~~~L 301 (466)
++.++||||.... +...|..... .....+|+|+.++++||+||+.... + ...+|++||+++|
T Consensus 73 ~~~v~GNHD~~~~-----------~~~~~~~~~~---~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~ql~wL~~~L 138 (240)
T cd07402 73 VYLLPGNHDDRAA-----------MRAVFPELPP---APGFVQYVVDLGGWRLILLDSSVPGQHGGELCAAQLDWLEAAL 138 (240)
T ss_pred EEEeCCCCCCHHH-----------HHHhhccccc---cccccceeEecCCEEEEEEeCCCCCCcCCEECHHHHHHHHHHH
Confidence 9999999997421 1122211100 1335789999999999999996532 1 3578999999999
Q ss_pred hhccCCCCCeEEEEeccccccCCCccc-ccCHHHHHHHHHHHHHc-CCcEEEecccceecCCcccccCCCCCcEEEEeCC
Q 012311 302 KKVDREKTPWLIVLMHVPIYNSNEAHF-MEGESMRAAFESWFVRY-KVDYRISNLHYNISSGDCFPVPDKSAPVYITVGD 379 (466)
Q Consensus 302 ~~~~r~~~~w~IV~~H~P~y~s~~~h~-~~~~~~r~~l~~ll~~y-~Vd~~~~gh~~~~~~~~~~~~~~~~g~vyiv~G~ 379 (466)
++.. ..++|+++|+|++....... ......++.+.++|.++ +|+++++||.|.... ...+|+.|+++|+
T Consensus 139 ~~~~---~~~~il~~H~pp~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~------~~~~g~~~~~~gs 209 (240)
T cd07402 139 AEAP---DKPTLVFLHHPPFPVGIAWMDAIGLRNAEALAAVLARHPNVRAILCGHVHRPID------GSWGGIPLLTAPS 209 (240)
T ss_pred HhCC---CCCEEEEECCCCccCCchhhhhhhCCCHHHHHHHHhcCCCeeEEEECCcCchHH------eEECCEEEEEcCc
Confidence 9853 45678999999987543111 11122377899999999 999999999985322 1346888999998
Q ss_pred CCCCCCCCCCCCCCCCCccceeeCcccEEEEEEec
Q 012311 380 GGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKN 414 (466)
Q Consensus 380 gG~~~~~~~~~~~~~p~~sa~~~~~~G~~~l~v~n 414 (466)
.|.... +.|+..++.+..+||..+.+..
T Consensus 210 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 237 (240)
T cd07402 210 TCHQFA-------PDLDDFALDALAPGYRALSLHE 237 (240)
T ss_pred ceeeec-------CCCCcccccccCCCCcEEEEec
Confidence 887632 2333455556778998888743
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa |
| >cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.3e-21 Score=191.75 Aligned_cols=198 Identities=21% Similarity=0.256 Sum_probs=131.7
Q ss_pred eEEEEEccCCCCCC----------cHHH----HHHHHHhCCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCC
Q 012311 160 YKFGIIGDLGQTYN----------SLST----LEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQP 225 (466)
Q Consensus 160 ~~f~v~GD~g~~~~----------~~~t----l~~~~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P 225 (466)
|||++++|+|.... +... ++++.+.+||||+++||++...... . ...|+.+.+.+..+ .+|
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~--~-~~~~~~~~~~l~~l--~~p 75 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNAR--A-EEALDAVLAILDRL--KGP 75 (267)
T ss_pred CeEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCch--H-HHHHHHHHHHHHhc--CCC
Confidence 69999999995432 1222 3344445899999999999643211 0 24455555555544 589
Q ss_pred eEEcCCCceeeccCcCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCCC-------------------
Q 012311 226 WIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSP------------------- 286 (466)
Q Consensus 226 ~~~~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~------------------- 286 (466)
+++++||||..... . ..+...+. ...+..||+|++|+++||+||+...
T Consensus 76 ~~~v~GNHD~~~~~---~----~~~~~~~~------~~~~~~yysf~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~ 142 (267)
T cd07396 76 VHHVLGNHDLYNPS---R----EYLLLYTL------LGLGAPYYSFSPGGIRFIVLDGYDISALGRPEDTPKAENADDNS 142 (267)
T ss_pred EEEecCcccccccc---H----hhhhcccc------cCCCCceEEEecCCcEEEEEeCCccccccCCCCChhhhhHHHhc
Confidence 99999999986321 0 00100110 1134579999999999999999531
Q ss_pred -------------C--CCChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHHc-CCcEE
Q 012311 287 -------------F--VKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRY-KVDYR 350 (466)
Q Consensus 287 -------------~--~~~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y-~Vd~~ 350 (466)
+ ....+|++||+++|+++.. +..++||++|+|++...... ......++.+.++|.+| +|+.+
T Consensus 143 ~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~-~~~~viV~~Hhp~~~~~~~~-~~~~~~~~~~~~ll~~~~~V~~v 220 (267)
T cd07396 143 NLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADA-NGEKVIIFSHFPLHPESTSP-HGLLWNHEEVLSILRAYGCVKAC 220 (267)
T ss_pred hhhhhccCccceeccCcCCHHHHHHHHHHHHHHHh-cCCeEEEEEeccCCCCCCCc-cccccCHHHHHHHHHhCCCEEEE
Confidence 0 1247999999999998642 33568999999998654311 11112357889999996 89999
Q ss_pred EecccceecCCcccccCCCCCcEEEEeCCCCCC
Q 012311 351 ISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQ 383 (466)
Q Consensus 351 ~~gh~~~~~~~~~~~~~~~~g~vyiv~G~gG~~ 383 (466)
++||.|.... ...+|+.|+++|+-...
T Consensus 221 ~~GH~H~~~~------~~~~gi~~~~~~a~~~~ 247 (267)
T cd07396 221 ISGHDHEGGY------AQRHGIHFLTLEGMVET 247 (267)
T ss_pred EcCCcCCCCc------cccCCeeEEEechhhcC
Confidence 9999985422 13468999998876543
|
Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.1e-19 Score=175.78 Aligned_cols=239 Identities=15% Similarity=0.129 Sum_probs=145.8
Q ss_pred EEECCCCCCCCCCeEEEEEccCCCCCC---------cHH----HHHHHHHh--CCCEEEEcccccccccccccccchhHH
Q 012311 147 WFQTPPKIDPDASYKFGIIGDLGQTYN---------SLS----TLEHYMES--GAQTVLFLGDLSYADRYQFIDVGVRWD 211 (466)
Q Consensus 147 ~F~T~p~~g~~~~~~f~v~GD~g~~~~---------~~~----tl~~~~~~--~~dfvl~~GDl~Y~~~~~~~d~~~~wd 211 (466)
..+|+++. ..+++|+.++|+|.... ... .++++.+. +|||||++||++.... ...+.
T Consensus 4 ~~~~~~~~--~~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~------~~~~~ 75 (275)
T PRK11148 4 LLTLPLAG--EARVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS------SEAYQ 75 (275)
T ss_pred ccccccCC--CCCEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC------HHHHH
Confidence 34666553 46899999999996321 122 23444343 6999999999996321 23455
Q ss_pred HHHHHHHHHhhcCCeEEcCCCceeeccCcCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCCC---CC
Q 012311 212 SWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSP---FV 288 (466)
Q Consensus 212 ~~~~~~~~l~~~~P~~~~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~---~~ 288 (466)
.+.+.++.+ .+|+++++||||.... +..+.....+ ...++.+..++++||+|||... .|
T Consensus 76 ~~~~~l~~l--~~Pv~~v~GNHD~~~~--------~~~~~~~~~~--------~~~~~~~~~~~~~~i~Lds~~~g~~~G 137 (275)
T PRK11148 76 HFAEGIAPL--RKPCVWLPGNHDFQPA--------MYSALQDAGI--------SPAKHVLIGEHWQILLLDSQVFGVPHG 137 (275)
T ss_pred HHHHHHhhc--CCcEEEeCCCCCChHH--------HHHHHhhcCC--------CccceEEecCCEEEEEecCCCCCCcCC
Confidence 555555554 6899999999997421 1111111111 1223444455699999999642 22
Q ss_pred -CChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCC-cccccCHHHHHHHHHHHHHc-CCcEEEecccceecCCcccc
Q 012311 289 -KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNE-AHFMEGESMRAAFESWFVRY-KVDYRISNLHYNISSGDCFP 365 (466)
Q Consensus 289 -~~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~-~h~~~~~~~r~~l~~ll~~y-~Vd~~~~gh~~~~~~~~~~~ 365 (466)
...+|++||+++|++. +....||++|||+...+. +.......-.++|..+|++| +|+.+++||.|.-..
T Consensus 138 ~l~~~ql~wL~~~L~~~---~~~~~vv~~hH~P~~~~~~~~d~~~l~n~~~l~~ll~~~~~v~~vl~GH~H~~~~----- 209 (275)
T PRK11148 138 ELSEYQLEWLERKLADA---PERHTLVLLHHHPLPAGCAWLDQHSLRNAHELAEVLAKFPNVKAILCGHIHQELD----- 209 (275)
T ss_pred EeCHHHHHHHHHHHhhC---CCCCeEEEEcCCCCCCCcchhhccCCCCHHHHHHHHhcCCCceEEEecccChHHh-----
Confidence 3589999999999985 223456666665544332 11111112346899999998 899999999985321
Q ss_pred cCCCCCcEEEEeCCCCCCCCCCCCCCCCCCCccceeeCcccEEEEEEecCCeEEEEEEEcCC
Q 012311 366 VPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRNDD 427 (466)
Q Consensus 366 ~~~~~g~vyiv~G~gG~~~~~~~~~~~~~p~~sa~~~~~~G~~~l~v~n~t~l~~~~~~~~d 427 (466)
...+|+.++++++.+..... ..+++ ++.....||..+++.++..+..++++-.+
T Consensus 210 -~~~~gi~~~~~ps~~~q~~~------~~~~~-~~~~~~~g~~~~~l~~~g~~~~~~~~~~~ 263 (275)
T PRK11148 210 -LDWNGRRLLATPSTCVQFKP------HCTNF-TLDTVAPGWRELELHADGSLETEVHRLAD 263 (275)
T ss_pred -ceECCEEEEEcCCCcCCcCC------CCCcc-ccccCCCcEEEEEEcCCCcEEEEEEEcCC
Confidence 13467888887776654211 11111 22234579999999655556666666443
|
|
| >cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.80 E-value=2e-18 Score=168.14 Aligned_cols=183 Identities=16% Similarity=0.170 Sum_probs=117.2
Q ss_pred EEEEccCCCCCCcH-H-------HHHHHHHhCCCEEEEccccccccccc---ccccchhHHHHHHHHHHHhh--cCCeEE
Q 012311 162 FGIIGDLGQTYNSL-S-------TLEHYMESGAQTVLFLGDLSYADRYQ---FIDVGVRWDSWGRFVERSAA--YQPWIW 228 (466)
Q Consensus 162 f~v~GD~g~~~~~~-~-------tl~~~~~~~~dfvl~~GDl~Y~~~~~---~~d~~~~wd~~~~~~~~l~~--~~P~~~ 228 (466)
|+.++|+|.+.... . .++.+.+.+||+++++||++...... ..+.+.+|+.|.+.+..... ..|++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 68899998764311 1 12334444999999999999432211 11125678888887765433 589999
Q ss_pred cCCCceeeccCcCC-cccccccccccccCCCCCCCCCCCceEE--EeeCCEEEEEEcCCCCC---------C-CChHHHH
Q 012311 229 SAGNHEIEYMTYMG-EVVPFKSYLHRYPTPHLASKSSSPLWYA--IRRASAHIIVLSSYSPF---------V-KYTPQWE 295 (466)
Q Consensus 229 ~~GNHE~~~~~~~~-~~~~f~~y~~rf~~P~~~~~~~~~~yYs--f~~g~v~fI~Lds~~~~---------~-~~~~Q~~ 295 (466)
++||||........ ....|..|...+ ++ ...+|. ++.|+++||+|||.... + ...+|++
T Consensus 82 v~GNHD~~~~~~~~~~~~~~~~y~~~~-~~-------~~~~~~~~~~~~~~~~I~Ldt~~~~~~~~~~~~~g~l~~~ql~ 153 (256)
T cd07401 82 IRGNHDLFNIPSLDSENNYYRKYSATG-RD-------GSFSFSHTTRFGNYSFIGVDPTLFPGPKRPFNFFGSLDKKLLD 153 (256)
T ss_pred eCCCCCcCCCCCccchhhHHHHhheec-CC-------CccceEEEecCCCEEEEEEcCccCCCCCCCCceeccCCHHHHH
Confidence 99999985322111 011111222111 11 122333 34599999999996321 1 3589999
Q ss_pred HHHHHHhhccCCCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEeccccee
Q 012311 296 WLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYNI 358 (466)
Q Consensus 296 WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~ 358 (466)
||+++|++. .+.+++||++|+|++..... .....+ .+.++|.+++|++++|||.|..
T Consensus 154 wL~~~L~~~--~~~~~~IV~~HhP~~~~~~~---~~~~~~-~~~~ll~~~~v~~vl~GH~H~~ 210 (256)
T cd07401 154 RLEKELEKS--TNSNYTIWFGHYPTSTIISP---SAKSSS-KFKDLLKKYNVTAYLCGHLHPL 210 (256)
T ss_pred HHHHHHHhc--ccCCeEEEEEcccchhccCC---CcchhH-HHHHHHHhcCCcEEEeCCccCC
Confidence 999999985 34578999999999753321 111223 3999999999999999999853
|
TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.1e-18 Score=163.63 Aligned_cols=145 Identities=17% Similarity=0.184 Sum_probs=105.2
Q ss_pred eEEEEEccCCCCCCc-H----HHHHHH----HHhCCCEEEEcccccccccccccccchhHHHHHHHHHHHh-hcCCeEEc
Q 012311 160 YKFGIIGDLGQTYNS-L----STLEHY----MESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSA-AYQPWIWS 229 (466)
Q Consensus 160 ~~f~v~GD~g~~~~~-~----~tl~~~----~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~-~~~P~~~~ 229 (466)
|||++++|+|..... . ..++.+ .+.++|+|+++||++..... ..+|+.+.+.++.+. ..+|++++
T Consensus 1 f~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~-----~~~~~~~~~~~~~l~~~~~p~~~~ 75 (214)
T cd07399 1 FTLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDN-----DAEWEAADKAFARLDKAGIPYSVL 75 (214)
T ss_pred CEEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCC-----HHHHHHHHHHHHHHHHcCCcEEEE
Confidence 699999999975431 1 122333 33489999999999964321 357888888888886 67999999
Q ss_pred CCCceeeccCcCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCC
Q 012311 230 AGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKT 309 (466)
Q Consensus 230 ~GNHE~~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~~~~~~~Q~~WL~~~L~~~~r~~~ 309 (466)
+||||. ++.+|+. ...+|++||+++|++. +.
T Consensus 76 ~GNHD~------------------------------------------~~~ld~~----~~~~ql~WL~~~L~~~---~~ 106 (214)
T cd07399 76 AGNHDL------------------------------------------VLALEFG----PRDEVLQWANEVLKKH---PD 106 (214)
T ss_pred CCCCcc------------------------------------------hhhCCCC----CCHHHHHHHHHHHHHC---CC
Confidence 999992 2223322 2479999999999984 34
Q ss_pred CeEEEEeccccccCCCccccc-----CHHHHHHHHHHHHHc-CCcEEEeccccee
Q 012311 310 PWLIVLMHVPIYNSNEAHFME-----GESMRAAFESWFVRY-KVDYRISNLHYNI 358 (466)
Q Consensus 310 ~w~IV~~H~P~y~s~~~h~~~-----~~~~r~~l~~ll~~y-~Vd~~~~gh~~~~ 358 (466)
.++||++|+|++..+...... .+..++.|++||++| +|+.+++||.|..
T Consensus 107 ~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~ 161 (214)
T cd07399 107 RPAILTTHAYLNCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGA 161 (214)
T ss_pred CCEEEEecccccCCCCcCcccccccccccHHHHHHHHHhCCCCEEEEEccccCCC
Confidence 568999999998755432111 134456799999999 7999999998853
|
YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for |
| >cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.5e-16 Score=158.28 Aligned_cols=189 Identities=16% Similarity=0.213 Sum_probs=122.4
Q ss_pred EccCCCCCC---cHHHHHHHHHh--CCCEEEEcccccccccccccc-cch--hHHHHHHHHHHHhhcCCeEEcCCCceee
Q 012311 165 IGDLGQTYN---SLSTLEHYMES--GAQTVLFLGDLSYADRYQFID-VGV--RWDSWGRFVERSAAYQPWIWSAGNHEIE 236 (466)
Q Consensus 165 ~GD~g~~~~---~~~tl~~~~~~--~~dfvl~~GDl~Y~~~~~~~d-~~~--~wd~~~~~~~~l~~~~P~~~~~GNHE~~ 236 (466)
+|+.+.... -..+++.+.+. +|||||++||++..+...... ... .+..+.+.++.....+|+++++||||..
T Consensus 43 ~G~~~CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~~ 122 (296)
T cd00842 43 WGDYGCDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDSY 122 (296)
T ss_pred CcCcCCCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCCC
Confidence 666664332 13455666666 899999999999866542211 011 2455666677777789999999999985
Q ss_pred ccCcC----Cccccccccccccc--CCCCCC-CCCCCceEEEe-eCCEEEEEEcCCCCC-----------CCChHHHHHH
Q 012311 237 YMTYM----GEVVPFKSYLHRYP--TPHLAS-KSSSPLWYAIR-RASAHIIVLSSYSPF-----------VKYTPQWEWL 297 (466)
Q Consensus 237 ~~~~~----~~~~~f~~y~~rf~--~P~~~~-~~~~~~yYsf~-~g~v~fI~Lds~~~~-----------~~~~~Q~~WL 297 (466)
..... +....+..+...|. +|.++. ....+.||++. .++++||+|||.... .....|++||
T Consensus 123 p~~~~~~~~~~~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql~WL 202 (296)
T cd00842 123 PVNQFPPNNSPSWLYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKNFWLLGSNETDPAGQLQWL 202 (296)
T ss_pred cccccCCcccccHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccChhhhccCCCCHHHHHHHH
Confidence 32111 01111122222232 332211 11246799998 889999999996321 1237899999
Q ss_pred HHHHhhccCCCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHHcC--CcEEEecccce
Q 012311 298 REELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYK--VDYRISNLHYN 357 (466)
Q Consensus 298 ~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~--Vd~~~~gh~~~ 357 (466)
+++|+++... ...++|++|+|++..... .....++.|.+|+.+|. |...++||.|.
T Consensus 203 ~~~L~~a~~~-~~~v~I~~HiPp~~~~~~---~~~~~~~~~~~ii~~y~~~i~~~~~GH~H~ 260 (296)
T cd00842 203 EDELQEAEQA-GEKVWIIGHIPPGVNSYD---TLENWSERYLQIINRYSDTIAGQFFGHTHR 260 (296)
T ss_pred HHHHHHHHHC-CCeEEEEeccCCCCcccc---cchHHHHHHHHHHHHHHHhhheeeeccccc
Confidence 9999997532 345788899999874321 11356789999999998 77899999874
|
Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but |
| >PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 | Back alignment and domain information |
|---|
Probab=99.65 E-value=2e-16 Score=140.90 Aligned_cols=191 Identities=19% Similarity=0.148 Sum_probs=100.4
Q ss_pred eEEEEEccCCCCCCcH----HHHH-HHHHhCCCEEEEcccccccccccccccchhHHHHH-HHHHHHhhcCCeEEcCCCc
Q 012311 160 YKFGIIGDLGQTYNSL----STLE-HYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWG-RFVERSAAYQPWIWSAGNH 233 (466)
Q Consensus 160 ~~f~v~GD~g~~~~~~----~tl~-~~~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~-~~~~~l~~~~P~~~~~GNH 233 (466)
+||+++||+|...... ..+. ...+.++|+||++||+++..... ..+.... .........+|+++++|||
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~GNH 75 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPS-----EEWRAQFWFFIRLLNPKIPVYFILGNH 75 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHH-----HHHHHHHHHHHHHHHTTTTEEEEE-TT
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeecccccccccc-----ccchhhhccchhhhhcccccccccccc
Confidence 6999999999876533 2222 23344999999999999865431 1222111 2334456789999999999
Q ss_pred eeeccCcCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCCCeEE
Q 012311 234 EIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLI 313 (466)
Q Consensus 234 E~~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~~~~~~~Q~~WL~~~L~~~~r~~~~w~I 313 (466)
|........................... ..+...........+..............|..|+...+....+...+|+|
T Consensus 76 D~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 153 (200)
T PF00149_consen 76 DYYSGNSFYGFYDYQFEDYYGNYNYYYS--YFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVI 153 (200)
T ss_dssp SSHHHHHHHHHHHHHHSSEEECSSEEEC--TESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEE
T ss_pred ccceeccccccccccccccccccccccc--cCcceeeecccccccccccccccccccccchhccccccccccccccccee
Confidence 9864311000000000000000000000 00000111222222222222111111222223333222222235678999
Q ss_pred EEeccccccCCCcccc--cCHHHHHHHHHHHHHcCCcEEEecccce
Q 012311 314 VLMHVPIYNSNEAHFM--EGESMRAAFESWFVRYKVDYRISNLHYN 357 (466)
Q Consensus 314 V~~H~P~y~s~~~h~~--~~~~~r~~l~~ll~~y~Vd~~~~gh~~~ 357 (466)
|++|+|+++....... .....++.++.++.+++|+++++||.|.
T Consensus 154 v~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~GH~H~ 199 (200)
T PF00149_consen 154 VFTHHPPYSSSSDSSSYGNESKGREALEELLKKYNVDLVLSGHTHR 199 (200)
T ss_dssp EEESSSSSTTSSSTHHHSSEEEHHHHHHHHHHHTTCSEEEEESSSS
T ss_pred EEEecCCCCccccccccchhhccHHHHHHHHhhCCCCEEEeCceec
Confidence 9999999987653211 1235788999999999999999999874
|
The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C .... |
| >cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.1e-14 Score=138.48 Aligned_cols=163 Identities=20% Similarity=0.225 Sum_probs=103.9
Q ss_pred HHHHh-CCCEEEEcccccccccccccccchhHHH-HHHHHHHH---hhcCCeEEcCCCceeeccCcCCcccccccccccc
Q 012311 180 HYMES-GAQTVLFLGDLSYADRYQFIDVGVRWDS-WGRFVERS---AAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRY 254 (466)
Q Consensus 180 ~~~~~-~~dfvl~~GDl~Y~~~~~~~d~~~~wd~-~~~~~~~l---~~~~P~~~~~GNHE~~~~~~~~~~~~f~~y~~rf 254 (466)
.+.+. +||+|+++||++..... .. ..+|.+ +.++.+-+ ...+|++.++||||+...... .......|..+|
T Consensus 39 ~~~~~l~PD~vv~lGDL~d~G~~--~~-~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig~~~~~-~~~~~~rf~~~F 114 (257)
T cd08163 39 YMQKQLKPDSTIFLGDLFDGGRD--WA-DEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIGFGNGV-VLPVRQRFEKYF 114 (257)
T ss_pred HHHHhcCCCEEEEecccccCCee--Cc-HHHHHHHHHHHHHHhcCCCccceEEEeCCCcccCCCCCC-CHHHHHHHHHHh
Confidence 34443 89999999999864221 11 345654 33333332 224799999999998643211 011224455555
Q ss_pred cCCCCCCCCCCCceEEEeeCCEEEEEEcCCCCC-----CCChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCcccc
Q 012311 255 PTPHLASKSSSPLWYAIRRASAHIIVLSSYSPF-----VKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFM 329 (466)
Q Consensus 255 ~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~~-----~~~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~ 329 (466)
. ..+|+|++|+++||+|||..-. ....+|.+||++.|+... ....+||++|+|+|......++
T Consensus 115 g----------~~~~~~~~~~~~fV~Lds~~l~~~~~~~~~~~~~~~l~~~l~~~~--~~~p~ILl~H~Plyr~~~~~cg 182 (257)
T cd08163 115 G----------PTSRVIDVGNHTFVILDTISLSNKDDPDVYQPPREFLHSFSAMKV--KSKPRILLTHVPLYRPPNTSCG 182 (257)
T ss_pred C----------CCceEEEECCEEEEEEccccccCCcccccchhHHHHHHhhhhccC--CCCcEEEEeccccccCCCCCCC
Confidence 3 2468999999999999996421 134679999999998742 3344899999999965321110
Q ss_pred ---c---------CHH----H-HHHHHHHHHHcCCcEEEeccccee
Q 012311 330 ---E---------GES----M-RAAFESWFVRYKVDYRISNLHYNI 358 (466)
Q Consensus 330 ---~---------~~~----~-r~~l~~ll~~y~Vd~~~~gh~~~~ 358 (466)
+ +.. + .+.-..||++.+..++++||+|.+
T Consensus 183 ~~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~ 228 (257)
T cd08163 183 PLRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDY 228 (257)
T ss_pred CccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCcc
Confidence 0 111 1 234447888889999999999854
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site |
| >TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family | Back alignment and domain information |
|---|
Probab=99.55 E-value=4e-14 Score=145.41 Aligned_cols=90 Identities=10% Similarity=0.165 Sum_probs=69.8
Q ss_pred CCceEEEe-eCCEEEEEEcCCCCC----C-CChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCc----cc-ccCHH
Q 012311 265 SPLWYAIR-RASAHIIVLSSYSPF----V-KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEA----HF-MEGES 333 (466)
Q Consensus 265 ~~~yYsf~-~g~v~fI~Lds~~~~----~-~~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~----h~-~~~~~ 333 (466)
+..||||+ .+++|||+|||.... + ...+|++||+++|++ .+.+++||++|||++..+.. +. .....
T Consensus 290 G~~YYSFd~~ggvrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~---a~~k~VVVf~HHPp~s~g~~~~Dp~~pg~~~~ 366 (496)
T TIGR03767 290 GTGYYTFDIAGGVRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRA---SSDTLFVLFSHHTSWSMVNELTDPVDPGEKRH 366 (496)
T ss_pred CCceEEEEeECCEEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhc---CCCCCEEEEECCCCcccccccccccccccccc
Confidence 56799999 899999999996432 2 368999999999997 34568999999999875431 10 01112
Q ss_pred HHHHHHHHHHHc-CCcEEEecccce
Q 012311 334 MRAAFESWFVRY-KVDYRISNLHYN 357 (466)
Q Consensus 334 ~r~~l~~ll~~y-~Vd~~~~gh~~~ 357 (466)
..++|.++|.+| +|..+++||.|.
T Consensus 367 n~~eLldLL~~ypnV~aVfsGHvH~ 391 (496)
T TIGR03767 367 LGTELVSLLLEHPNVLAWVNGHTHS 391 (496)
T ss_pred CHHHHHHHHhcCCCceEEEECCcCC
Confidence 346899999999 899999999873
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202. |
| >PF14008 Metallophos_C: Iron/zinc purple acid phosphatase-like protein C; PDB: 3KBP_B 1KBP_B 4KBP_C 2QFP_B 2QFR_A 1XZW_B | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.7e-14 Score=109.13 Aligned_cols=62 Identities=45% Similarity=0.820 Sum_probs=41.4
Q ss_pred CCcEEEEeCCCCCCCCCCCCCCCCCCCccceeeCcccEEEEEEecCCeEEEEEEEcCCCceeeeeeE
Q 012311 370 SAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGKKVATDSF 436 (466)
Q Consensus 370 ~g~vyiv~G~gG~~~~~~~~~~~~~p~~sa~~~~~~G~~~l~v~n~t~l~~~~~~~~dg~~~~~D~~ 436 (466)
++|||||+|+||+.+ . .+..++|+|+++|...|||++|+|.|+|||+|+|+++.||++ .|+|
T Consensus 1 kapVhiv~G~aG~~l--~-~~~~~~~~wsa~r~~~~Gy~~l~v~N~T~l~~e~i~~~~g~v--~D~f 62 (62)
T PF14008_consen 1 KAPVHIVVGAAGNGL--D-PFPYPPPEWSAFRDSEYGYGRLTVANATHLHWEFIRSDDGSV--LDEF 62 (62)
T ss_dssp TS-EEEEE--S-T-------B-SS--TTEEEEE---EEEEEEE-SSSEEEEEEEETTS-T---CEE-
T ss_pred CCCEEEEECcCCCCc--c-cccCCCCCeeeeeccccCEEEEEEEcCCeEEEEEEECCCCcE--ecCC
Confidence 489999999999943 2 366778999999999999999999999999999999999985 8987
|
|
| >cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.5e-13 Score=127.24 Aligned_cols=145 Identities=19% Similarity=0.235 Sum_probs=95.6
Q ss_pred CeEEEEEccCCCCCCc---------HHH---HHHHHH-hCCCEEEEcccccccccccccccchhHHHHHHHHHHHhh-cC
Q 012311 159 SYKFGIIGDLGQTYNS---------LST---LEHYME-SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAA-YQ 224 (466)
Q Consensus 159 ~~~f~v~GD~g~~~~~---------~~t---l~~~~~-~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~-~~ 224 (466)
.+||++++|+|..... ..+ +.++.+ .+||+||++||+++..... ...+..+.++++++.. .+
T Consensus 2 ~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~----~~~~~~~~~~~~~l~~~~~ 77 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTN----DNSTSALDKAVSPMIDRKI 77 (199)
T ss_pred ceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCc----hHHHHHHHHHHHHHHHcCC
Confidence 5899999999986532 122 333333 3899999999999854431 1124455555565543 69
Q ss_pred CeEEcCCCceeeccCcCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhc
Q 012311 225 PWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKV 304 (466)
Q Consensus 225 P~~~~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~~~~~~~Q~~WL~~~L~~~ 304 (466)
|+++++||||.. . -....|++||+++|++.
T Consensus 78 p~~~~~GNHD~~-------------------------------------------------g-~l~~~ql~wL~~~l~~~ 107 (199)
T cd07383 78 PWAATFGNHDGY-------------------------------------------------D-WIRPSQIEWFKETSAAL 107 (199)
T ss_pred CEEEECccCCCC-------------------------------------------------C-CCCHHHHHHHHHHHHHH
Confidence 999999999910 0 12368999999999986
Q ss_pred c--CCCCCeEEEEeccccccCCCc---------cccc---CHHHH-HHHHHHHHHcCCcEEEecccce
Q 012311 305 D--REKTPWLIVLMHVPIYNSNEA---------HFME---GESMR-AAFESWFVRYKVDYRISNLHYN 357 (466)
Q Consensus 305 ~--r~~~~w~IV~~H~P~y~s~~~---------h~~~---~~~~r-~~l~~ll~~y~Vd~~~~gh~~~ 357 (466)
. +....+.++++|+|+...... +..+ ..... ..+..+....+|+.+++||+|.
T Consensus 108 ~~~~~~~~~~l~f~H~P~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~v~~GH~H~ 175 (199)
T cd07383 108 KKKYGKPIPSLAFFHIPLPEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKGVFCGHDHG 175 (199)
T ss_pred hhccCCCCcceEEEecChHHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEEEEeCCCCC
Confidence 3 234568999999998764320 0111 01112 2344455778999999999984
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP |
| >cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.2e-12 Score=120.73 Aligned_cols=165 Identities=12% Similarity=0.012 Sum_probs=99.8
Q ss_pred EEEEccCCCCCCcHHHHHHHHHhCCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCceeeccCcC
Q 012311 162 FGIIGDLGQTYNSLSTLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYM 241 (466)
Q Consensus 162 f~v~GD~g~~~~~~~tl~~~~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~~~~~~~ 241 (466)
++++||++........ ..+.+.++|+||++||++..... ..... .+.+.. ..+|+++++||||.....
T Consensus 1 i~~~sD~H~~~~~~~~-~~~~~~~~D~vv~~GDl~~~~~~------~~~~~-~~~l~~--~~~p~~~v~GNHD~~~~~-- 68 (188)
T cd07392 1 ILAISDIHGDVEKLEA-IILKAEEADAVIVAGDITNFGGK------EAAVE-INLLLA--IGVPVLAVPGNCDTPEIL-- 68 (188)
T ss_pred CEEEEecCCCHHHHHH-HHhhccCCCEEEECCCccCcCCH------HHHHH-HHHHHh--cCCCEEEEcCCCCCHHHH--
Confidence 4789999986543322 23444589999999999963221 11111 133332 368999999999964210
Q ss_pred CcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCCC--C----CCChHHHHHHHHHHhhccCCCCCeEEEE
Q 012311 242 GEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSP--F----VKYTPQWEWLREELKKVDREKTPWLIVL 315 (466)
Q Consensus 242 ~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~--~----~~~~~Q~~WL~~~L~~~~r~~~~w~IV~ 315 (466)
.......... .-..+.++++.|+.+++..+ + ....+|++|+ +.|+. ...+.+|++
T Consensus 69 ------~~~~~~~~~~---------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~l~~---~~~~~~ilv 129 (188)
T cd07392 69 ------GLLTSAGLNL---------HGKVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSD-GRLNN---LLAKNLILV 129 (188)
T ss_pred ------HhhhcCcEec---------CCCEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHh-hhhhc---cCCCCeEEE
Confidence 0000000000 11345678899999997421 1 2356899998 45544 334568999
Q ss_pred eccccccCC-CcccccCHHHHHHHHHHHHHcCCcEEEecccce
Q 012311 316 MHVPIYNSN-EAHFMEGESMRAAFESWFVRYKVDYRISNLHYN 357 (466)
Q Consensus 316 ~H~P~y~s~-~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~ 357 (466)
+|+|++... .........-.+.+..+++++++++++|||.|.
T Consensus 130 ~H~pp~~~~~d~~~~~~~~g~~~l~~li~~~~~~~~l~GH~H~ 172 (188)
T cd07392 130 THAPPYGTAVDRVSGGFHVGSKAIRKFIEERQPLLCICGHIHE 172 (188)
T ss_pred ECCCCcCCcccccCCCCccCCHHHHHHHHHhCCcEEEEecccc
Confidence 999998631 111111011235788899999999999999874
|
PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina |
| >cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.6e-12 Score=123.37 Aligned_cols=189 Identities=17% Similarity=0.167 Sum_probs=110.7
Q ss_pred EEEccCCCCC--------C---cHHHHHHHHHh------CCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCC
Q 012311 163 GIIGDLGQTY--------N---SLSTLEHYMES------GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQP 225 (466)
Q Consensus 163 ~v~GD~g~~~--------~---~~~tl~~~~~~------~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P 225 (466)
.+++|+|... . ..+.++.+.+. +||+||++||++.... ........+.++.+ ..|
T Consensus 2 ~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~------~~~~~~~l~~l~~l--~~~ 73 (232)
T cd07393 2 FAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMK------LEEAKLDLAWIDAL--PGT 73 (232)
T ss_pred eEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCC------hHHHHHHHHHHHhC--CCC
Confidence 4688888662 1 13455555554 8999999999984221 11222223333332 347
Q ss_pred eEEcCCCceeeccCcCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCC----CC---------C----
Q 012311 226 WIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYS----PF---------V---- 288 (466)
Q Consensus 226 ~~~~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~----~~---------~---- 288 (466)
+++++||||+... .. ..+...+. .. +.......++.++++.|+.++... .+ .
T Consensus 74 v~~V~GNHD~~~~----~~---~~~~~~l~--~~--~~~~~~n~~~~~~~i~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (232)
T cd07393 74 KVLLKGNHDYWWG----SA---SKLRKALE--ES--RLALLFNNAYIDDDVAICGTRGWDNPGNPWPPINETLKVEEDEK 142 (232)
T ss_pred eEEEeCCccccCC----CH---HHHHHHHH--hc--CeEEeccCcEEECCEEEEEEEeeCCCCCccccccccccchhHHH
Confidence 8999999997311 00 11111111 00 000001245567889999886321 11 0
Q ss_pred CChHHHHHHHHHHhhccCC-CCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccceecCCccccc-
Q 012311 289 KYTPQWEWLREELKKVDRE-KTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYNISSGDCFPV- 366 (466)
Q Consensus 289 ~~~~Q~~WL~~~L~~~~r~-~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~~~~~~~~~- 366 (466)
....|++||++.|+++... ...++|+++|+|++.... + .+.+..++.+++||++++||.|....-. +.
T Consensus 143 ~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~~----~----~~~~~~~~~~~~v~~vl~GH~H~~~~~~--~~~ 212 (232)
T cd07393 143 IFERELERLELSLKAAKKREKEKIKIVMLHYPPANENG----D----DSPISKLIEEYGVDICVYGHLHGVGRDR--AIN 212 (232)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCcCCCC----C----HHHHHHHHHHcCCCEEEECCCCCCcccc--ccc
Confidence 1356999999999986432 225799999999987432 1 1366789999999999999988532100 00
Q ss_pred CCCCCcEEEEeCCC
Q 012311 367 PDKSAPVYITVGDG 380 (466)
Q Consensus 367 ~~~~g~vyiv~G~g 380 (466)
...+|+.|.++.++
T Consensus 213 ~~~~gi~~~~~~~~ 226 (232)
T cd07393 213 GERGGIRYQLVSAD 226 (232)
T ss_pred ceECCEEEEEEcch
Confidence 12467778776654
|
DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat |
| >COG1409 Icc Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.40 E-value=5.8e-12 Score=124.23 Aligned_cols=178 Identities=16% Similarity=0.131 Sum_probs=113.2
Q ss_pred eEEEEEccCCCC--CC-cHHHH----HHHHHhCCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCC
Q 012311 160 YKFGIIGDLGQT--YN-SLSTL----EHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGN 232 (466)
Q Consensus 160 ~~f~v~GD~g~~--~~-~~~tl----~~~~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GN 232 (466)
++|+.++|.|.. .. +...+ +++...+||+++++||++.. +. ........++++......|++++|||
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~-~~-----~~~~~~~~~~l~~~~~~~~~~~vpGN 74 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTND-GE-----PEEYRRLKELLARLELPAPVIVVPGN 74 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCC-CC-----HHHHHHHHHHHhhccCCCceEeeCCC
Confidence 489999999988 22 23333 34444589999999999975 22 23334445555544457789999999
Q ss_pred ceeeccCcCCcccccccccccccCCCCCCCCCCCceEEEee-CCEEEEEEcCCCCC---C-CChHHHHHHHHHHhhccCC
Q 012311 233 HEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRR-ASAHIIVLSSYSPF---V-KYTPQWEWLREELKKVDRE 307 (466)
Q Consensus 233 HE~~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~-g~v~fI~Lds~~~~---~-~~~~Q~~WL~~~L~~~~r~ 307 (466)
||..... ...+...+.... ..+-.... +++++|.+|+.... | .+..|++||++.|++....
T Consensus 75 HD~~~~~-------~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~d~~~~~~~~G~~~~~q~~~l~~~l~~~~~~ 140 (301)
T COG1409 75 HDARVVN-------GEAFSDQFFNRY-------AVLVGACSSGGWRVIGLDSSVPGVPLGRLGAEQLDWLEEALAAAPER 140 (301)
T ss_pred CcCCchH-------HHHhhhhhcccC-------cceEeeccCCceEEEEecCCCCCCCCCEECHHHHHHHHHHHHhCccc
Confidence 9975321 112222221110 11111222 67899999997532 2 4789999999999985322
Q ss_pred CCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHHcC--CcEEEecccce
Q 012311 308 KTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYK--VDYRISNLHYN 357 (466)
Q Consensus 308 ~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~--Vd~~~~gh~~~ 357 (466)
....+|+++|+|+.................+..++..++ |+.+++||.|.
T Consensus 141 ~~~~~v~~~hh~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vl~GH~H~ 192 (301)
T COG1409 141 AKDTVVVLHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLSGHIHL 192 (301)
T ss_pred cCceEEEecCCCCCCCCCccceeeeecchhHHHHHHhcCCceEEEEeCcccc
Confidence 123567777877776544332222233457778899999 99999999874
|
|
| >cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.38 E-value=5.5e-12 Score=111.68 Aligned_cols=132 Identities=18% Similarity=0.177 Sum_probs=89.8
Q ss_pred EEEEccCCCCCCcHH-----------HHHHHHHhCCCEEEEcccccccccccccccchhHHHHHHHHHHHhhc-CCeEEc
Q 012311 162 FGIIGDLGQTYNSLS-----------TLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAY-QPWIWS 229 (466)
Q Consensus 162 f~v~GD~g~~~~~~~-----------tl~~~~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~-~P~~~~ 229 (466)
|+.++|++.+..... .++.+.+.++|+|+++||+++... ...|+.+.++++.+... +|++.+
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~------~~~~~~~~~~~~~l~~~~~~~~~v 74 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGL------PEEFEEAREFLDALPAPLEPVLVV 74 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCC------HHHHHHHHHHHHHccccCCcEEEe
Confidence 468899987654211 122233449999999999997432 34566777777776543 699999
Q ss_pred CCCceeeccCcCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCC
Q 012311 230 AGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKT 309 (466)
Q Consensus 230 ~GNHE~~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~~~~~~~Q~~WL~~~L~~~~r~~~ 309 (466)
+||||.
T Consensus 75 ~GNHD~-------------------------------------------------------------------------- 80 (144)
T cd07400 75 PGNHDV-------------------------------------------------------------------------- 80 (144)
T ss_pred CCCCeE--------------------------------------------------------------------------
Confidence 999995
Q ss_pred CeEEEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccceecCCcccccCCCCCcEEEEeCC
Q 012311 310 PWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYNISSGDCFPVPDKSAPVYITVGD 379 (466)
Q Consensus 310 ~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~~~~~~~~~~~~~g~vyiv~G~ 379 (466)
|+++|+|++...... ......++.+.++|.+++|+++++||.|......+. ...++++++..|+
T Consensus 81 ---iv~~Hhp~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~l~GH~H~~~~~~~~--~~~~~~~~~~aGs 144 (144)
T cd07400 81 ---IVVLHHPLVPPPGSG-RERLLDAGDALKLLAEAGVDLVLHGHKHVPYVGNIS--NAGGGLVVIGAGT 144 (144)
T ss_pred ---EEEecCCCCCCCccc-cccCCCHHHHHHHHHHcCCCEEEECCCCCcCeeecc--CCCCCEEEEecCC
Confidence 889999998754321 111114668999999999999999999854322221 2345666666653
|
YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv |
| >TIGR03729 acc_ester putative phosphoesterase | Back alignment and domain information |
|---|
Probab=99.38 E-value=5.6e-12 Score=121.59 Aligned_cols=174 Identities=15% Similarity=0.098 Sum_probs=102.2
Q ss_pred EEEEEccCCCCCCc---HH----HHHHHHHhCCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCc
Q 012311 161 KFGIIGDLGQTYNS---LS----TLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNH 233 (466)
Q Consensus 161 ~f~v~GD~g~~~~~---~~----tl~~~~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNH 233 (466)
||++++|+|..... .. .++.+.+.++|+|+++||++.. . .+-..+.+.+..+ ..+|++.++|||
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~--~------~~~~~~~~~l~~~-~~~pv~~v~GNH 71 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISND--F------QRSLPFIEKLQEL-KGIKVTFNAGNH 71 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccc--h------hhHHHHHHHHHHh-cCCcEEEECCCC
Confidence 58999999964322 22 2333445589999999999942 1 1112333333332 458999999999
Q ss_pred eeeccCcCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCCC--------------------------C
Q 012311 234 EIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSP--------------------------F 287 (466)
Q Consensus 234 E~~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~--------------------------~ 287 (466)
|...... +..+...+. + ..-.+.++.+..++++||.++...+ .
T Consensus 72 D~~~~~~------~~~~~~~~~-~----~~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~~~~~~~~d~~~~~~~~~ 140 (239)
T TIGR03729 72 DMLKDLT------YEEIESNDS-P----LYLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKTSKEILRWKKSFWFDRRIKR 140 (239)
T ss_pred CCCCCCC------HHHHHhccc-h----hhhcccccccCCCceEEEeeccceecccccccCHHHHHHhhhcEEeecccCC
Confidence 9741110 111111110 0 0011223334446788888884211 1
Q ss_pred C-----CChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCC----c--ccccC--HHHHHHHHHHHHHcCCcEEEecc
Q 012311 288 V-----KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNE----A--HFMEG--ESMRAAFESWFVRYKVDYRISNL 354 (466)
Q Consensus 288 ~-----~~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~----~--h~~~~--~~~r~~l~~ll~~y~Vd~~~~gh 354 (466)
. ....|++||++.|++.. ...+||++|+|+..... . .+... ..-...|+.++++++|+.+++||
T Consensus 141 ~~~~~~~~~~~l~~l~~~l~~~~---~~~~ivvtH~pP~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~~v~~~i~GH 217 (239)
T TIGR03729 141 PMSDPERTAIVLKQLKKQLNQLD---NKQVIFVTHFVPHRDFIYVPMDHRRFDMFNAFLGSQHFGQLLVKYEIKDVIFGH 217 (239)
T ss_pred CCChHHHHHHHHHHHHHHHHhcC---CCCEEEEEcccchHHHhcCCCCCcchhhhhhccChHHHHHHHHHhCCCEEEECC
Confidence 1 13678999999998852 23488999998855211 0 11110 11136888999999999999999
Q ss_pred cce
Q 012311 355 HYN 357 (466)
Q Consensus 355 ~~~ 357 (466)
.|.
T Consensus 218 ~H~ 220 (239)
T TIGR03729 218 LHR 220 (239)
T ss_pred ccC
Confidence 884
|
Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system. |
| >TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.1e-10 Score=119.21 Aligned_cols=91 Identities=18% Similarity=0.320 Sum_probs=65.5
Q ss_pred CCceEEEe-eCCE--EEEEEcCCCC---------C-C-CChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCC-cc--
Q 012311 265 SPLWYAIR-RASA--HIIVLSSYSP---------F-V-KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNE-AH-- 327 (466)
Q Consensus 265 ~~~yYsf~-~g~v--~fI~Lds~~~---------~-~-~~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~-~h-- 327 (466)
+..||+|+ .|++ |||+||+... + | ...+|++||+++|+.+. .+.+++||++|+|+.+... .+
T Consensus 291 G~~yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~-a~~p~VVV~hHpPi~t~gi~~md~ 369 (492)
T TIGR03768 291 DFACYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQ-ADGQLMIIAAHIPIAVSPIGSEME 369 (492)
T ss_pred CcceeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCc-CCCceEEEEeCCCcccCCccchhh
Confidence 34699999 5855 9999998641 1 1 35899999999999874 2668899999988876322 11
Q ss_pred cc----------cCHHHHHHHHHHHHHc-CCcEEEecccc
Q 012311 328 FM----------EGESMRAAFESWFVRY-KVDYRISNLHY 356 (466)
Q Consensus 328 ~~----------~~~~~r~~l~~ll~~y-~Vd~~~~gh~~ 356 (466)
+. ++...-.+|..+|.+| +|-.++|||.|
T Consensus 370 w~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvH 409 (492)
T TIGR03768 370 WWLGAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRH 409 (492)
T ss_pred hccccccccccccccccHHHHHHHHhcCCCeEEEEcCCcc
Confidence 00 0011123789999999 79999999987
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes. |
| >cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.23 E-value=4.6e-11 Score=108.50 Aligned_cols=142 Identities=14% Similarity=0.194 Sum_probs=87.1
Q ss_pred EEEEccCCCCCCcHHHH--HHHHHhCCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCceeeccC
Q 012311 162 FGIIGDLGQTYNSLSTL--EHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMT 239 (466)
Q Consensus 162 f~v~GD~g~~~~~~~tl--~~~~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~~~~~ 239 (466)
|++++|++......... +.+.+.++|+++++||++.... . ..+...........|++.++||||....
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~------~---~~~~~~~~~~~~~~~v~~v~GNHD~~~~- 70 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTD------A---PRFAPLLLALKGFEPVIYVPGNHEFYVR- 70 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcc------h---HHHHHHHHhhcCCccEEEeCCCcceEEE-
Confidence 57899999865433221 1223348999999999996322 1 1222223333457899999999997410
Q ss_pred cCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEEeccc
Q 012311 240 YMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLMHVP 319 (466)
Q Consensus 240 ~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~~~~~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P 319 (466)
+. . ...||.+... ..++.+|+.++++ +.+||++|+|
T Consensus 71 ----------~~---G---------~~~w~~~~~~---------------~~~~~~~~~~d~~-------~~~vv~~Hhp 106 (166)
T cd07404 71 ----------II---G---------TTLWSDISLF---------------GEAAARMRMNDFR-------GKTVVVTHHA 106 (166)
T ss_pred ----------EE---e---------eecccccCcc---------------chHHHHhCCCCCC-------CCEEEEeCCC
Confidence 00 0 0123333221 1346667666665 3479999999
Q ss_pred cccCCCcc--c-c-cCHHHHHHHHHHHHHcCCcEEEecccce
Q 012311 320 IYNSNEAH--F-M-EGESMRAAFESWFVRYKVDYRISNLHYN 357 (466)
Q Consensus 320 ~y~s~~~h--~-~-~~~~~r~~l~~ll~~y~Vd~~~~gh~~~ 357 (466)
++...... . . .....++.+..++++++|+.+++||.|.
T Consensus 107 P~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~i~GH~H~ 148 (166)
T cd07404 107 PSPLSLAPQYGDSLVNAAFAVDLDDLILADPIDLWIHGHTHF 148 (166)
T ss_pred CCccccCccccCCCcchhhhhccHhHHhhcCCCEEEECCccc
Confidence 98765321 1 1 1123456677888999999999999874
|
MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t |
| >cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.2e-10 Score=110.46 Aligned_cols=183 Identities=15% Similarity=0.078 Sum_probs=104.1
Q ss_pred EEEEEccCCCCCCc------------HHHHHHH----HHhCCCEEEEcccccccccccccccchhHHHHHHHHHHHh-hc
Q 012311 161 KFGIIGDLGQTYNS------------LSTLEHY----MESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSA-AY 223 (466)
Q Consensus 161 ~f~v~GD~g~~~~~------------~~tl~~~----~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~-~~ 223 (466)
||+.++|+|.+... ..+++++ .+.++|+||++||++...... ...+..+.+.++.+. ..
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~----~~~~~~~~~~~~~~~~~~ 76 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPS----PEALELLIEALRRLKEAG 76 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCC----HHHHHHHHHHHHHHHHCC
Confidence 68999999976421 1233333 344999999999998643311 234556666666664 47
Q ss_pred CCeEEcCCCceeeccCcCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCCCCCCChHHHHHHHHHHhh
Q 012311 224 QPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKK 303 (466)
Q Consensus 224 ~P~~~~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~~~~~~~Q~~WL~~~L~~ 303 (466)
+|+++++||||....... ......+......- ............++.+++.|+.++..... ....+.++++..+.+
T Consensus 77 ~~v~~~~GNHD~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~i~g~~~~~~~-~~~~~~~~~~~~~~~ 152 (223)
T cd00840 77 IPVFIIAGNHDSPSRLGA--LSPLLALSGLHLVG-VEEDVLTPLLLPKGGTGVAIYGLPYLRRS-RLRDLLADAELRPRP 152 (223)
T ss_pred CCEEEecCCCCCcccccc--ccchHhhCcEEEEc-ccCcceeEEEeccCCeEEEEEECCCCCHH-HHHHHHHHHHHHhhc
Confidence 899999999998643110 00001111100000 00000112233445556888888764321 123344555555555
Q ss_pred ccCCCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccce
Q 012311 304 VDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYN 357 (466)
Q Consensus 304 ~~r~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~ 357 (466)
. ......|++.|.|+........ . . .......+...++|++++||.|.
T Consensus 153 ~--~~~~~~Il~~H~~~~~~~~~~~-~--~-~~~~~~~~~~~~~d~v~~GH~H~ 200 (223)
T cd00840 153 L--DPDDFNILLLHGGVAGAGPSDS-E--R-APFVPEALLPAGFDYVALGHIHR 200 (223)
T ss_pred c--CCCCcEEEEEeeeeecCCCCcc-c--c-cccCcHhhcCcCCCEEECCCccc
Confidence 4 3456789999999875443211 1 1 12334556788999999999874
|
Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi |
| >cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.5e-09 Score=103.20 Aligned_cols=178 Identities=12% Similarity=0.120 Sum_probs=102.6
Q ss_pred CCeEEEEEccCCCCCCcHHHHHHH-HHhCCCEEEEcccccccccccccccchhHHHHHHHHHHHhh-cCCeEEcCCCcee
Q 012311 158 ASYKFGIIGDLGQTYNSLSTLEHY-MESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAA-YQPWIWSAGNHEI 235 (466)
Q Consensus 158 ~~~~f~v~GD~g~~~~~~~tl~~~-~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~-~~P~~~~~GNHE~ 235 (466)
.+-|+++++|+|......+.+... .+.++|+|+++||++.... ..+.+.++++.+.. ..|+++++||||.
T Consensus 3 ~~~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~--------~~~~~~~~l~~l~~l~~pv~~V~GNhD~ 74 (224)
T cd07388 3 TVRYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAA--------KSEDYAAFFRILGEAHLPTFYVPGPQDA 74 (224)
T ss_pred ceeEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCC--------CHHHHHHHHHHHHhcCCceEEEcCCCCh
Confidence 356899999999754333333222 2348999999999996421 11334444444432 5799999999996
Q ss_pred eccCcCCcccccccccccccCCCCCCCCCCCceEEEee-CCEEEEEEcCCCCC--CCChHHH----HHHHHH-HhhccCC
Q 012311 236 EYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRR-ASAHIIVLSSYSPF--VKYTPQW----EWLREE-LKKVDRE 307 (466)
Q Consensus 236 ~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~-g~v~fI~Lds~~~~--~~~~~Q~----~WL~~~-L~~~~r~ 307 (466)
.....+. ..|...-..|..- . ..+. ...+ |++.|+.|+....+ ....+|. +||.+. |+...+.
T Consensus 75 ~v~~~l~-----~~~~~~~~~p~~~-~-lh~~--~~~~~g~~~~~GlGGs~~~~~e~sE~e~~~~~~~~~~~~l~~~~~~ 145 (224)
T cd07388 75 PLWEYLR-----EAYNAELVHPEIR-N-VHET--FAFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWEL 145 (224)
T ss_pred HHHHHHH-----HHhcccccCccce-e-cCCC--eEEecCCeEEEEecCCcCCCCCcCHHHHhhhhhhHHHHHHHHHHhC
Confidence 3100000 0111111112100 0 0112 2334 56999999975433 2344542 665442 2222112
Q ss_pred CCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccce
Q 012311 308 KTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYN 357 (466)
Q Consensus 308 ~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~ 357 (466)
..+..|+++|+|+|..+..|. ... .+..++++++=.+.+|||.|+
T Consensus 146 ~~~~~VLv~H~PP~g~g~~h~-GS~----alr~~I~~~~P~l~i~GHih~ 190 (224)
T cd07388 146 KDYRKVFLFHTPPYHKGLNEQ-GSH----EVAHLIKTHNPLVVLVGGKGQ 190 (224)
T ss_pred CCCCeEEEECCCCCCCCCCcc-CHH----HHHHHHHHhCCCEEEEcCCce
Confidence 345689999999998743342 223 555689999999999999874
|
This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets, |
| >cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.09 E-value=5.2e-10 Score=106.34 Aligned_cols=160 Identities=16% Similarity=0.031 Sum_probs=94.8
Q ss_pred CeEEEEEccCCCCCCc-H----HHHHHHHHhCCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCc
Q 012311 159 SYKFGIIGDLGQTYNS-L----STLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNH 233 (466)
Q Consensus 159 ~~~f~v~GD~g~~~~~-~----~tl~~~~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNH 233 (466)
++||++++|+|..... . ..++.+.+.+||+|+++||++..... .. +.+.+.++.+....|++.++|||
T Consensus 1 ~~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~-----~~--~~~~~~l~~l~~~~~v~~v~GNH 73 (223)
T cd07385 1 GLRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVD-----VL--ELLLELLKKLKAPLGVYAVLGNH 73 (223)
T ss_pred CCEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcch-----hh--HHHHHHHhccCCCCCEEEECCCc
Confidence 4799999999987542 1 22334444589999999999964322 11 34556666666678999999999
Q ss_pred eeeccCcCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCCCeEE
Q 012311 234 EIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLI 313 (466)
Q Consensus 234 E~~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~~~~~~~Q~~WL~~~L~~~~r~~~~w~I 313 (466)
|...... ..+........+. -..+.+..++.++..+.++.... .....+++.+.+++. .+....|
T Consensus 74 D~~~~~~----~~~~~~l~~~~v~-----~L~~~~~~~~~~~~~i~i~G~~~----~~~~~~~~~~~~~~~--~~~~~~I 138 (223)
T cd07385 74 DYYSGDE----ENWIEALESAGIT-----VLRNESVEISVGGATIGIAGVDD----GLGRRPDLEKALKGL--DEDDPNI 138 (223)
T ss_pred ccccCch----HHHHHHHHHcCCE-----EeecCcEEeccCCeEEEEEeccC----ccccCCCHHHHHhCC--CCCCCEE
Confidence 9864311 0000011000000 01123455666664444433111 122345677777764 3456789
Q ss_pred EEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccce
Q 012311 314 VLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYN 357 (466)
Q Consensus 314 V~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~ 357 (466)
++.|.|.+-. .+.+.++|+.++||.|.
T Consensus 139 ~l~H~P~~~~-----------------~~~~~~~dl~l~GHtHg 165 (223)
T cd07385 139 LLAHQPDTAE-----------------EAAAWGVDLQLSGHTHG 165 (223)
T ss_pred EEecCCChhH-----------------HhcccCccEEEeccCCC
Confidence 9999875321 11677999999999883
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia |
| >KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.1e-08 Score=98.03 Aligned_cols=255 Identities=20% Similarity=0.297 Sum_probs=136.1
Q ss_pred CCCeEEEEEccCCCCCC--------------------cHHHHHHHHHh-CCCEEEEcccccccccccccccchhHHHHHH
Q 012311 157 DASYKFGIIGDLGQTYN--------------------SLSTLEHYMES-GAQTVLFLGDLSYADRYQFIDVGVRWDSWGR 215 (466)
Q Consensus 157 ~~~~~f~v~GD~g~~~~--------------------~~~tl~~~~~~-~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~ 215 (466)
+++||++.++|+|.+.. +...+.++.+. +||||+++||++++... .|.+ ..+..
T Consensus 51 ~g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g~~t--~Da~---~sl~k 125 (379)
T KOG1432|consen 51 DGTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFGHST--QDAA---TSLMK 125 (379)
T ss_pred CCceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCccccccc--HhHH---HHHHH
Confidence 46899999999987653 11234555554 99999999999986332 2212 33455
Q ss_pred HHHHH-hhcCCeEEcCCCceeeccCcCCcccccccccccccCCCCCCC---CCCCce--------EEEeeC---------
Q 012311 216 FVERS-AAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASK---SSSPLW--------YAIRRA--------- 274 (466)
Q Consensus 216 ~~~~l-~~~~P~~~~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~~~~~---~~~~~y--------Ysf~~g--------- 274 (466)
.++|. ...+||.++.||||-+.... ..+ ...|.. .+|..-+. ..+..+ -.--+|
T Consensus 126 AvaP~I~~~IPwA~~lGNHDdes~lt-r~q--l~~~i~--~lP~s~~~v~p~dg~~~~~~g~gnyn~~i~~~~ds~~~~~ 200 (379)
T KOG1432|consen 126 AVAPAIDRKIPWAAVLGNHDDESDLT-RLQ--LMKFIS--KLPYSLSQVNPPDGHMYIIDGFGNYNLQIEGAIDSELENK 200 (379)
T ss_pred HhhhHhhcCCCeEEEecccccccccC-HHH--HHHHHh--cCCCccccCCCcccceeeeecccceEEEeccCCCcccccC
Confidence 66665 46899999999999653210 000 000000 01111000 000001 000011
Q ss_pred -CEEEEEEcCCCC---------CC-CChHHHHHHHHHHhh---ccCCCCC-eEEEEecccc--ccCCCcc------cccC
Q 012311 275 -SAHIIVLSSYSP---------FV-KYTPQWEWLREELKK---VDREKTP-WLIVLMHVPI--YNSNEAH------FMEG 331 (466)
Q Consensus 275 -~v~fI~Lds~~~---------~~-~~~~Q~~WL~~~L~~---~~r~~~~-w~IV~~H~P~--y~s~~~h------~~~~ 331 (466)
--.+++||+..+ |+ ....|..||+..-.+ .+..-.| -=++++|.|+ |..-... ..|+
T Consensus 201 sv~~lyfld~~~~~s~~~~~~~Ydwik~sq~~wl~~~~~~~~~~~~~~~P~p~La~~HIP~~E~~~~~~~tp~~g~~~E~ 280 (379)
T KOG1432|consen 201 SVFNLYFLDSSSYTSVPPLLPGYDWIKESQLEWLSDTSKEFKEPNSKYNPQPGLAFFHIPLPEFLELESKTPLIGVFQEG 280 (379)
T ss_pred ceeeEEEEecCCcccccccccCccchhhhhHHHHhhhhhhhhcccCccCCCCceEEEEcccHHHhhccCCCcccceeecc
Confidence 013455666431 22 246799999988733 1112223 3578889987 3221110 1121
Q ss_pred ---HHHHHHHHHHHH-HcCCcEEEecccceecCCcccccCCCCCcEEEEeCCCCCCCCCCCCCCCCCCCccceeeCcccE
Q 012311 332 ---ESMRAAFESWFV-RYKVDYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGH 407 (466)
Q Consensus 332 ---~~~r~~l~~ll~-~y~Vd~~~~gh~~~~~~~~~~~~~~~~g~vyiv~G~gG~~~~~~~~~~~~~p~~sa~~~~~~G~ 407 (466)
......+...|. .-+|+.+++||+| .|+-|.. -++.+++.=|+|+.. |.+. ++.|-. +-
T Consensus 281 ~~~~~~~sg~~~~L~~r~~Vk~vf~GHdH--vNDfC~~---~k~~~wlCygGgaGy-ggYg-----~~gw~R------r~ 343 (379)
T KOG1432|consen 281 VSASKHNSGFLTTLVNRGNVKGVFCGHDH--VNDFCGE---LKGELWLCYGGGAGY-GGYG-----IGGWER------RA 343 (379)
T ss_pred ccccccccHHHHHHHhccCcceEEecccc--ccceecc---cCCeEEEEecCCCcc-CCcC-----cCCccc------ce
Confidence 112234555666 8899999999998 3566753 344588887766554 2221 223321 12
Q ss_pred EEEEEe-cCCeEEEEEEEcCCCceeeeeeEEEE
Q 012311 408 STLEIK-NRTHAFYHWNRNDDGKKVATDSFILH 439 (466)
Q Consensus 408 ~~l~v~-n~t~l~~~~~~~~dg~~~~~D~~~i~ 439 (466)
-+++++ +...+ -+|.|.+|+...++|.-.+.
T Consensus 344 Rv~e~d~~~~~I-kTWKRl~d~~~~~~D~q~l~ 375 (379)
T KOG1432|consen 344 RVFELDLNKDRI-KTWKRLDDKPLSVIDYQLLY 375 (379)
T ss_pred EEEEcccccccc-ceeeecCCCCcceeeeEEEe
Confidence 345553 33434 37999888776566765543
|
|
| >cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.06 E-value=2.2e-09 Score=91.56 Aligned_cols=112 Identities=21% Similarity=0.178 Sum_probs=79.5
Q ss_pred EEEccCCCCCCcHHHHH---HHHHhCCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCceeeccC
Q 012311 163 GIIGDLGQTYNSLSTLE---HYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMT 239 (466)
Q Consensus 163 ~v~GD~g~~~~~~~tl~---~~~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~~~~~ 239 (466)
+++||++.+........ ...+.++++|+++||+++.... ..+..+...........|++.++||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~GNHD----- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPD------PEEVLAAALALLLLLGIPVYVVPGNHD----- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCC------chHHHHHHHHHhhcCCCCEEEeCCCce-----
Confidence 36899998765443332 3334499999999999985432 223333323444456899999999999
Q ss_pred cCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEEeccc
Q 012311 240 YMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLMHVP 319 (466)
Q Consensus 240 ~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~~~~~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P 319 (466)
|+++|.|
T Consensus 70 -------------------------------------------------------------------------i~~~H~~ 76 (131)
T cd00838 70 -------------------------------------------------------------------------ILLTHGP 76 (131)
T ss_pred -------------------------------------------------------------------------EEEeccC
Confidence 9999999
Q ss_pred cccCCCcccccCHHHHHHHHHHHHHcCCcEEEeccccee
Q 012311 320 IYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYNI 358 (466)
Q Consensus 320 ~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~ 358 (466)
++.............+..+..++.+++++.+++||.|..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GH~H~~ 115 (131)
T cd00838 77 PYDPLDELSPDEDPGSEALLELLEKYGVDLVLSGHTHVY 115 (131)
T ss_pred CCCCchhhcccchhhHHHHHHHHHHhCCCEEEeCCeecc
Confidence 987654321112225789999999999999999998854
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me |
| >cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.97 E-value=5.5e-09 Score=99.83 Aligned_cols=143 Identities=20% Similarity=0.222 Sum_probs=92.9
Q ss_pred EEEEEccCCCCCCcHHHHHHHH----HhCCCEEEEcccccccccccc-----------------c---ccchhHHHH--H
Q 012311 161 KFGIIGDLGQTYNSLSTLEHYM----ESGAQTVLFLGDLSYADRYQF-----------------I---DVGVRWDSW--G 214 (466)
Q Consensus 161 ~f~v~GD~g~~~~~~~tl~~~~----~~~~dfvl~~GDl~Y~~~~~~-----------------~---d~~~~wd~~--~ 214 (466)
||++.++.+...........+. +.+|||+|++||.+|++.... . ++..++..+ .
T Consensus 1 r~a~~SC~~~~~~~~~~~~~~~~~~~~~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~~ 80 (228)
T cd07389 1 RFAFGSCNKYESGYFNAYRALAYDHSEEDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRSD 80 (228)
T ss_pred CEEEEECCCCCCCCcHHHHHHhhhccccCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcCC
Confidence 5788888877665555555554 569999999999999986321 1 112222222 2
Q ss_pred HHHHHHhhcCCeEEcCCCceeeccCcCCc-------c------cccccccccccCCCCCCC--CCCCceEEEeeCCE-EE
Q 012311 215 RFVERSAAYQPWIWSAGNHEIEYMTYMGE-------V------VPFKSYLHRYPTPHLASK--SSSPLWYAIRRASA-HI 278 (466)
Q Consensus 215 ~~~~~l~~~~P~~~~~GNHE~~~~~~~~~-------~------~~f~~y~~rf~~P~~~~~--~~~~~yYsf~~g~v-~f 278 (466)
..++.+.+.+|++.++++||+..+..... . ....+|......+..... ...+.|++|.+|.. .|
T Consensus 81 p~~~~~~~~~p~~~iwDDHDi~~n~~~~~~~~~~~~~~~~~~~~a~~ay~e~~~~~~~~~~~~~~~~~y~~~~~G~~~~~ 160 (228)
T cd07389 81 PDLQRLLAQVPTIGIWDDHDIGDNWGGDGAWVQDSPVFYARKAAARQAYLEFQPVRNPSPRRGGRGGIYRSFRFGDLVDL 160 (228)
T ss_pred HHHHHHhhcCCEEEeccccccccccccccccccCcchHHHHHHHHHHHHHHHcCCCCCCccCCCCceEEEEEecCCcceE
Confidence 34567778999999999999975532210 0 012334444333332222 34579999999996 99
Q ss_pred EEEcCCC---CCCCChHHHHHHHHHHhh
Q 012311 279 IVLSSYS---PFVKYTPQWEWLREELKK 303 (466)
Q Consensus 279 I~Lds~~---~~~~~~~Q~~WL~~~L~~ 303 (466)
|+||++. .|+....+.++|.+.|+.
T Consensus 161 ~~lD~R~~Rd~W~~~~~er~~l~~~~~~ 188 (228)
T cd07389 161 ILLDTRTYRDSWDGYPAERERLLDLLAK 188 (228)
T ss_pred EEEecccccccccccHHHHHHHHHHHHH
Confidence 9999975 355567778888887755
|
PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF |
| >PRK11340 phosphodiesterase YaeI; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=9.6e-08 Score=93.92 Aligned_cols=158 Identities=15% Similarity=0.055 Sum_probs=89.7
Q ss_pred CCeEEEEEccCCCCCC-cHHHHH----HHHHhCCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCC
Q 012311 158 ASYKFGIIGDLGQTYN-SLSTLE----HYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGN 232 (466)
Q Consensus 158 ~~~~f~v~GD~g~~~~-~~~tl~----~~~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GN 232 (466)
.++|+++++|+|.... ....++ .+.+.+||+|+++||++..+. ...++.+.+.++.+.+..|++.++||
T Consensus 48 ~~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~------~~~~~~~~~~L~~L~~~~pv~~V~GN 121 (271)
T PRK11340 48 APFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDM------PLNFSAFSDVLSPLAECAPTFACFGN 121 (271)
T ss_pred CCcEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCc------cccHHHHHHHHHHHhhcCCEEEecCC
Confidence 4799999999998632 222233 344459999999999985221 12345666777777767899999999
Q ss_pred ceeeccCcCCcccccccccccccCCCCCCCCCCCceEEEeeCC--EEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCCC
Q 012311 233 HEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRAS--AHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTP 310 (466)
Q Consensus 233 HE~~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~--v~fI~Lds~~~~~~~~~Q~~WL~~~L~~~~r~~~~ 310 (466)
||+...... ...+...+. ..+-.--.+....+..++ +.++.+|.... +... ..+.+++ + .
T Consensus 122 HD~~~~~~~-----~~~~~~~l~--~~gi~lL~n~~~~i~~~~~~i~i~G~~d~~~-~~~~-----~~~~~~~----~-~ 183 (271)
T PRK11340 122 HDRPVGTEK-----NHLIGETLK--SAGITVLFNQATVIATPNRQFELVGTGDLWA-GQCK-----PPPASEA----N-L 183 (271)
T ss_pred CCcccCccc-----hHHHHHHHH--hcCcEEeeCCeEEEeeCCcEEEEEEecchhc-cCCC-----hhHhcCC----C-C
Confidence 997532100 001111110 000000113344555543 56666654211 1111 1112222 2 3
Q ss_pred eEEEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccc
Q 012311 311 WLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHY 356 (466)
Q Consensus 311 w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~ 356 (466)
..|++.|.|-+- +.+.+.++|+.+|||+|
T Consensus 184 ~~IlL~H~P~~~-----------------~~~~~~~~dL~lsGHTH 212 (271)
T PRK11340 184 PRLVLAHNPDSK-----------------EVMRDEPWDLMLCGHTH 212 (271)
T ss_pred CeEEEEcCCChh-----------------HhhccCCCCEEEecccc
Confidence 478899999642 12346799999999998
|
|
| >cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.74 E-value=7e-08 Score=84.59 Aligned_cols=114 Identities=15% Similarity=0.126 Sum_probs=71.2
Q ss_pred EEEEEccCCCCCCcHHHHHHHHHhCCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCC-eEEcCCCceeeccC
Q 012311 161 KFGIIGDLGQTYNSLSTLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQP-WIWSAGNHEIEYMT 239 (466)
Q Consensus 161 ~f~v~GD~g~~~~~~~tl~~~~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P-~~~~~GNHE~~~~~ 239 (466)
||+++||++.... .+...++|+++++||++.... ...++.+.+.++.+ ..| +++++||||...
T Consensus 1 ~i~~isD~H~~~~------~~~~~~~D~vi~~GD~~~~~~------~~~~~~~~~~l~~~--~~~~~~~v~GNHD~~~-- 64 (135)
T cd07379 1 RFVCISDTHSRHR------TISIPDGDVLIHAGDLTERGT------LEELQKFLDWLKSL--PHPHKIVIAGNHDLTL-- 64 (135)
T ss_pred CEEEEeCCCCCCC------cCcCCCCCEEEECCCCCCCCC------HHHHHHHHHHHHhC--CCCeEEEEECCCCCcC--
Confidence 5899999997654 222348999999999985321 22233444444433 233 578999999531
Q ss_pred cCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEEeccc
Q 012311 240 YMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLMHVP 319 (466)
Q Consensus 240 ~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~~~~~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P 319 (466)
. . ..+.|+++|.|
T Consensus 65 --------~-------------------------------------------------------~----~~~~ilv~H~~ 77 (135)
T cd07379 65 --------D-------------------------------------------------------P----EDTDILVTHGP 77 (135)
T ss_pred --------C-------------------------------------------------------C----CCCEEEEECCC
Confidence 0 1 12468889999
Q ss_pred cccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccce
Q 012311 320 IYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYN 357 (466)
Q Consensus 320 ~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~ 357 (466)
++............-.+.+..++.++++++.++||.|.
T Consensus 78 p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~GH~H~ 115 (135)
T cd07379 78 PYGHLDLVSSGQRVGCEELLNRVQRVRPKLHVFGHIHE 115 (135)
T ss_pred CCcCccccccCcccCCHHHHHHHHHHCCcEEEEcCcCC
Confidence 98754321110001113455677899999999999874
|
239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme |
| >PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [] | Back alignment and domain information |
|---|
Probab=98.72 E-value=8.3e-08 Score=85.51 Aligned_cols=153 Identities=20% Similarity=0.211 Sum_probs=86.3
Q ss_pred eEEEEEccCCCCCCcH-HHHHHHHHhCCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCceeecc
Q 012311 160 YKFGIIGDLGQTYNSL-STLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYM 238 (466)
Q Consensus 160 ~~f~v~GD~g~~~~~~-~tl~~~~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~~~~ 238 (466)
+||+++||++...... +.++.+ +++|+|+++||++.. .++.+.++.+ |++++.||||...
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~------------~~~~~~~~~~----~~~~v~GNHD~~~- 61 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP------------EEVLELLRDI----PVYVVRGNHDNWA- 61 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH------------HHHHHHHHHH----EEEEE--CCHSTH-
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH------------HHHHHHHhcC----CEEEEeCCccccc-
Confidence 5899999999864332 223333 479999999998841 3344444443 9999999999532
Q ss_pred CcCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhc-cCCCCCeEEEEec
Q 012311 239 TYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKV-DREKTPWLIVLMH 317 (466)
Q Consensus 239 ~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~~~~~~~Q~~WL~~~L~~~-~r~~~~w~IV~~H 317 (466)
+...... .. +... ...-..+.|++.|
T Consensus 62 -----------~~~~~~~---------~~---------------------------------~~~~~~~~~~~~~i~~~H 88 (156)
T PF12850_consen 62 -----------FPNENDE---------EY---------------------------------LLDALRLTIDGFKILLSH 88 (156)
T ss_dssp -----------HHSEECT---------CS---------------------------------SHSEEEEEETTEEEEEES
T ss_pred -----------chhhhhc---------cc---------------------------------cccceeeeecCCeEEEEC
Confidence 1110000 00 1110 0012245788888
Q ss_pred cccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccceecCCcccccCCCCCcEEEEeCCCCCCCCCCCCCCCCCCCc
Q 012311 318 VPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDY 397 (466)
Q Consensus 318 ~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~~~~~~~~~~~~~g~vyiv~G~gG~~~~~~~~~~~~~p~~ 397 (466)
.+.+.... ..+.+..++...+++++++||.|.-.. ...+++.++..|+-+.... .
T Consensus 89 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~~GH~H~~~~------~~~~~~~~~~~Gs~~~~~~-----~------ 143 (156)
T PF12850_consen 89 GHPYDVQW--------DPAELREILSRENVDLVLHGHTHRPQV------FKIGGIHVINPGSIGGPRH-----G------ 143 (156)
T ss_dssp STSSSSTT--------THHHHHHHHHHTTSSEEEESSSSSEEE------EEETTEEEEEE-GSSS-SS-----S------
T ss_pred CCCccccc--------ChhhhhhhhcccCCCEEEcCCcccceE------EEECCEEEEECCcCCCCCC-----C------
Confidence 87766321 122455778899999999999885321 1245688888887654321 0
Q ss_pred cceeeCcccEEEEEEec
Q 012311 398 SAFREASYGHSTLEIKN 414 (466)
Q Consensus 398 sa~~~~~~G~~~l~v~n 414 (466)
+ .-+|..+++.+
T Consensus 144 ----~-~~~~~i~~~~~ 155 (156)
T PF12850_consen 144 ----D-QSGYAILDIED 155 (156)
T ss_dssp ----S-SEEEEEEEETT
T ss_pred ----C-CCEEEEEEEec
Confidence 1 35788888854
|
; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A .... |
| >PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.7e-07 Score=90.52 Aligned_cols=174 Identities=15% Similarity=0.084 Sum_probs=94.1
Q ss_pred EEEEEccCCCCCCcHHH----HHHHH--HhCCCEEEEcccccccccccccccchhHHHHHHHHHHHhhc-CCeEEcCCCc
Q 012311 161 KFGIIGDLGQTYNSLST----LEHYM--ESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAY-QPWIWSAGNH 233 (466)
Q Consensus 161 ~f~v~GD~g~~~~~~~t----l~~~~--~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~-~P~~~~~GNH 233 (466)
++++++|+|.+...... ++.+. +.++|+|+++||++..-...... ........+.++.+... +|++.++|||
T Consensus 2 ~i~~iSDlHl~~~~~~~~~~~~~~l~~~~~~~d~l~i~GDl~d~~~g~~~~-~~~~~~~~~~l~~l~~~g~~v~~v~GNH 80 (241)
T PRK05340 2 PTLFISDLHLSPERPAITAAFLRFLRGEARQADALYILGDLFEAWIGDDDP-SPFAREIAAALKALSDSGVPCYFMHGNR 80 (241)
T ss_pred cEEEEeecCCCCCChhHHHHHHHHHHhhhccCCEEEEccceeccccccCcC-CHHHHHHHHHHHHHHHcCCeEEEEeCCC
Confidence 78999999987543222 22232 23899999999999531110000 12223445566666544 8999999999
Q ss_pred eeeccCcCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCCCeEE
Q 012311 234 EIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLI 313 (466)
Q Consensus 234 E~~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~~~~~~~Q~~WL~~~L~~~~r~~~~w~I 313 (466)
|.... ..+.....+. .-+....++.++.++++.-... +......++++++.+.. ||.+
T Consensus 81 D~~~~---------~~~~~~~g~~------~l~~~~~~~~~g~~i~l~HGd~-~~~~d~~y~~~r~~~r~------~~~~ 138 (241)
T PRK05340 81 DFLLG---------KRFAKAAGMT------LLPDPSVIDLYGQRVLLLHGDT-LCTDDKAYQRFRRKVRN------PWLQ 138 (241)
T ss_pred chhhh---------HHHHHhCCCE------EeCCcEEEEECCEEEEEECCcc-cccCCHHHHHHHHHHhC------HHHH
Confidence 97421 1111111100 0012345677777777765432 11234556666555544 2333
Q ss_pred EEeccccccCCCc------------cc-ccC---HHHHHHHHHHHHHcCCcEEEecccce
Q 012311 314 VLMHVPIYNSNEA------------HF-MEG---ESMRAAFESWFVRYKVDYRISNLHYN 357 (466)
Q Consensus 314 V~~H~P~y~s~~~------------h~-~~~---~~~r~~l~~ll~~y~Vd~~~~gh~~~ 357 (466)
.++|.+++..... +. ... ......+..++.+++++.+++||.|.
T Consensus 139 ~~~~~~p~~~~~~ia~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~ 198 (241)
T PRK05340 139 WLFLALPLSIRLRIAAKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHR 198 (241)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccC
Confidence 3444444432100 00 000 00124677899999999999999873
|
|
| >cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.66 E-value=4.6e-07 Score=86.67 Aligned_cols=195 Identities=15% Similarity=0.136 Sum_probs=98.0
Q ss_pred eEEEEEccCCCCCCcHHHHHHHHHhCCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCceeeccC
Q 012311 160 YKFGIIGDLGQTYNSLSTLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMT 239 (466)
Q Consensus 160 ~~f~v~GD~g~~~~~~~tl~~~~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~~~~~ 239 (466)
+|++++||+|..... ...+.+.+.+||+|+++||++.. . ..+.+.+..+ ..|++.++||||.....
T Consensus 1 ~rIa~isDiHg~~~~-~~~~~l~~~~pD~Vl~~GDi~~~--------~---~~~~~~l~~l--~~p~~~V~GNHD~~~~~ 66 (238)
T cd07397 1 LRIAIVGDVHGQWDL-EDIKALHLLQPDLVLFVGDFGNE--------S---VQLVRAISSL--PLPKAVILGNHDAWYDA 66 (238)
T ss_pred CEEEEEecCCCCchH-HHHHHHhccCCCEEEECCCCCcC--------h---HHHHHHHHhC--CCCeEEEcCCCcccccc
Confidence 589999999975432 22334444589999999999831 1 1223333332 47999999999985431
Q ss_pred cCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCC----------------CCCC--ChHHHHHHHHHH
Q 012311 240 YMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYS----------------PFVK--YTPQWEWLREEL 301 (466)
Q Consensus 240 ~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~----------------~~~~--~~~Q~~WL~~~L 301 (466)
.. +. ....+......-.+ .-=.|=..++....+.++.++. -|+. ..+-.+.+.+.+
T Consensus 67 ~~-~~-k~~~l~~~L~~lg~----~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~ 140 (238)
T cd07397 67 TF-RK-KGDRVQEQLELLGD----LHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAA 140 (238)
T ss_pred cc-cc-hHHHHHHHHHHhCC----cEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHh
Confidence 10 00 00111111110000 0000111112222233333321 0111 122334444545
Q ss_pred hhccCCCCCeEEEEeccccccCCCc---------cc----ccCHHHHHHHHHHHHHcCCcEEEecccce-ecCCcc---c
Q 012311 302 KKVDREKTPWLIVLMHVPIYNSNEA---------HF----MEGESMRAAFESWFVRYKVDYRISNLHYN-ISSGDC---F 364 (466)
Q Consensus 302 ~~~~r~~~~w~IV~~H~P~y~s~~~---------h~----~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~-~~~~~~---~ 364 (466)
+.++ ...+ .|++.|.++...++. .. -..+++++++..+-..-.++++++||.|+ +..+.- .
T Consensus 141 ~~~~-~~~~-~VliaH~~~~G~g~~~~~~cg~d~~~~~~~~G~~~l~~ai~~~~~~~~~~l~~fGH~H~~l~~~~~~r~~ 218 (238)
T cd07397 141 KKAP-PDLP-LILLAHNGPSGLGSDAEDPCGRDWKPPGGDWGDPDLALAISQIQQGRQVPLVVFGHMHHRLRRGKGLRNM 218 (238)
T ss_pred hhcC-CCCC-eEEEeCcCCcCCCcccccccccccCCcCCCCCCHHHHHHHHHHhccCCCCEEEeCCccCcccccccccce
Confidence 4332 2333 588899999766421 10 12367777776655445578999999775 333321 0
Q ss_pred ccCCCCCcEEEE
Q 012311 365 PVPDKSAPVYIT 376 (466)
Q Consensus 365 ~~~~~~g~vyiv 376 (466)
-..+..|++|+-
T Consensus 219 ~~~~~~gt~y~N 230 (238)
T cd07397 219 IAVDREGTVYLN 230 (238)
T ss_pred eeecCCCeEEEe
Confidence 113567899974
|
DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy |
| >cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.53 E-value=3.7e-07 Score=84.60 Aligned_cols=102 Identities=21% Similarity=0.285 Sum_probs=66.2
Q ss_pred CCCEEEEcccccccccccccccchhHHHHHHHHHHH---hhcCCeEEcCCCceeeccCcCCcccccccccccccCCCCCC
Q 012311 185 GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERS---AAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLAS 261 (466)
Q Consensus 185 ~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l---~~~~P~~~~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~~~~ 261 (466)
+||+|+++||++.+..... ..+|.+..+.+.+. ...+|++.++||||++.... .+...-..||.
T Consensus 42 ~PD~Vi~lGDL~D~G~~~~---~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG~~~~----~~~~~~v~RF~------ 108 (195)
T cd08166 42 QPDIVIFLGDLMDEGSIAN---DDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIGGEEE----DPIESKIRRFE------ 108 (195)
T ss_pred CCCEEEEeccccCCCCCCC---HHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcCCCCC----CcCHHHHHHHH------
Confidence 9999999999997644321 33444433333333 24689999999999974210 11112223442
Q ss_pred CCCCCceEEEeeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCcccccCHHHHHHHHHH
Q 012311 262 KSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESW 341 (466)
Q Consensus 262 ~~~~~~yYsf~~g~v~fI~Lds~~~~~~~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~l 341 (466)
.+| |++.|.|+..... . .+..+
T Consensus 109 -----~~F-------------------------------------------i~lsH~P~~~~~~------~----~~~~~ 130 (195)
T cd08166 109 -----KYF-------------------------------------------IMLSHVPLLAEGG------Q----ALKHV 130 (195)
T ss_pred -----Hhh-------------------------------------------eeeeccccccccc------H----HHHHH
Confidence 111 9999999976332 1 55678
Q ss_pred HHHcCCcEEEecccce
Q 012311 342 FVRYKVDYRISNLHYN 357 (466)
Q Consensus 342 l~~y~Vd~~~~gh~~~ 357 (466)
+.++.++.++++|.|.
T Consensus 131 ~~~~~p~~Ifs~H~H~ 146 (195)
T cd08166 131 VTDLDPDLIFSAHRHK 146 (195)
T ss_pred HHhcCceEEEEcCccc
Confidence 8999999999999874
|
A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R |
| >cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.50 E-value=6.5e-07 Score=81.88 Aligned_cols=56 Identities=29% Similarity=0.534 Sum_probs=36.2
Q ss_pred HHHHHh-CCCEEEEcccccccccccccccchhHHHHHHHHHHHh-------hcCCeEEcCCCceeec
Q 012311 179 EHYMES-GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSA-------AYQPWIWSAGNHEIEY 237 (466)
Q Consensus 179 ~~~~~~-~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~-------~~~P~~~~~GNHE~~~ 237 (466)
..+.+. +||+|+++||++...... + ...|.+..+.+..+. ..+|+++++||||+..
T Consensus 38 ~~~i~~~~pd~vi~lGDl~d~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 38 KTALQRLKPDVVLFLGDLFDGGRIA--D-SEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred HHHHHhcCCCEEEEeccccCCcEeC--C-HHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 334333 999999999999643221 1 234554444443332 2689999999999864
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit |
| >cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.45 E-value=7.1e-07 Score=80.40 Aligned_cols=50 Identities=22% Similarity=0.389 Sum_probs=33.8
Q ss_pred hCCCEEEEcccccccccccccccchhHHHHHHHHHHHh---hcCCeEEcCCCceee
Q 012311 184 SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSA---AYQPWIWSAGNHEIE 236 (466)
Q Consensus 184 ~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~---~~~P~~~~~GNHE~~ 236 (466)
.+||+|+++||++...... . ...|..+...+..+. ..+|+++++||||..
T Consensus 37 ~~pd~vv~~GDl~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 37 LQPDVVFVLGDLFDEGKWS--T-DEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred cCCCEEEECCCCCCCCccC--C-HHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 3999999999999643221 1 345655444443332 258999999999974
|
MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to |
| >cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.9e-06 Score=77.12 Aligned_cols=131 Identities=17% Similarity=0.101 Sum_probs=79.0
Q ss_pred EEEEEccCCCCCCcHHHHHHHHHh--CCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCceeecc
Q 012311 161 KFGIIGDLGQTYNSLSTLEHYMES--GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYM 238 (466)
Q Consensus 161 ~f~v~GD~g~~~~~~~tl~~~~~~--~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~~~~ 238 (466)
|+++++|++... ..++++.+. ++|.|+++||++..... . . +....|++.+.||||...
T Consensus 1 ~i~~isD~H~~~---~~~~~~~~~~~~~d~ii~~GD~~~~~~~-----~-~----------~~~~~~~~~V~GNhD~~~- 60 (155)
T cd00841 1 KIGVISDTHGSL---ELLEKALELFGDVDLIIHAGDVLYPGPL-----N-E----------LELKAPVIAVRGNCDGEV- 60 (155)
T ss_pred CEEEEecCCCCH---HHHHHHHHHhcCCCEEEECCcccccccc-----c-h----------hhcCCcEEEEeCCCCCcC-
Confidence 588999999754 333444332 49999999999853221 1 1 234679999999999631
Q ss_pred CcCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEEecc
Q 012311 239 TYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLMHV 318 (466)
Q Consensus 239 ~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~~~~~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~ 318 (466)
+ ...+| ....++. ..++|++.|.
T Consensus 61 -----------~--~~~~p---------~~~~~~~-----------------------------------~g~~i~v~Hg 83 (155)
T cd00841 61 -----------D--FPILP---------EEAVLEI-----------------------------------GGKRIFLTHG 83 (155)
T ss_pred -----------C--cccCC---------ceEEEEE-----------------------------------CCEEEEEECC
Confidence 0 00011 1111111 1246788888
Q ss_pred ccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccceecCCcccccCCCCCcEEEEeCCCCCC
Q 012311 319 PIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQ 383 (466)
Q Consensus 319 P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~~~~~~~~~~~~~g~vyiv~G~gG~~ 383 (466)
+.+..... .+ . ..++.+.++|++++||.|.... ...+++.+|-.|+.|..
T Consensus 84 ~~~~~~~~-------~~-~-~~~~~~~~~d~vi~GHtH~~~~------~~~~~~~~inpGs~~~~ 133 (155)
T cd00841 84 HLYGVKNG-------LD-R-LYLAKEGGADVVLYGHTHIPVI------EKIGGVLLLNPGSLSLP 133 (155)
T ss_pred cccccccc-------hh-h-hhhhhhcCCCEEEECcccCCcc------EEECCEEEEeCCCccCc
Confidence 77653211 01 1 4567788999999999884321 12357888888887754
|
YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph |
| >TIGR00040 yfcE phosphoesterase, MJ0936 family | Back alignment and domain information |
|---|
Probab=98.37 E-value=8.7e-06 Score=73.26 Aligned_cols=61 Identities=18% Similarity=0.086 Sum_probs=41.2
Q ss_pred eEEEEEccCCCCCCcHHHHHH-HHHh-CCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCcee
Q 012311 160 YKFGIIGDLGQTYNSLSTLEH-YMES-GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEI 235 (466)
Q Consensus 160 ~~f~v~GD~g~~~~~~~tl~~-~~~~-~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~ 235 (466)
+|+++++|+|......+.+.+ +... ++|.|+++||++- . ...+.++.+ ..|++.+.||||.
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~---------~----~~~~~l~~~--~~~~~~V~GN~D~ 63 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLTS---------P----FVLKEFEDL--AAKVIAVRGNNDG 63 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCCC---------H----HHHHHHHHh--CCceEEEccCCCc
Confidence 479999999976544343333 3444 7999999999981 1 122333322 4589999999995
|
Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required. |
| >cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.33 E-value=4.7e-06 Score=72.54 Aligned_cols=46 Identities=17% Similarity=0.138 Sum_probs=30.7
Q ss_pred eEEEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccce
Q 012311 311 WLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYN 357 (466)
Q Consensus 311 w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~ 357 (466)
.+|+++|+|++........ ...-.+.+..++.+++++.+++||.|.
T Consensus 57 ~~Ilv~H~pp~~~~~~~~~-~~~g~~~l~~~l~~~~~~~vl~GH~H~ 102 (129)
T cd07403 57 VDILLTHAPPAGIGDGEDF-AHRGFEAFLDFIDRFRPKLFIHGHTHL 102 (129)
T ss_pred cCEEEECCCCCcCcCcccc-cccCHHHHHHHHHHHCCcEEEEcCcCC
Confidence 3588899998754321100 011245677888999999999999874
|
TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.7e-05 Score=76.17 Aligned_cols=72 Identities=22% Similarity=0.177 Sum_probs=45.6
Q ss_pred EEEccCCCCCCcH----HHHHHHHHh--CCCEEEEcccccccccccccc-cchhHHHHHHHHHHHhh-cCCeEEcCCCce
Q 012311 163 GIIGDLGQTYNSL----STLEHYMES--GAQTVLFLGDLSYADRYQFID-VGVRWDSWGRFVERSAA-YQPWIWSAGNHE 234 (466)
Q Consensus 163 ~v~GD~g~~~~~~----~tl~~~~~~--~~dfvl~~GDl~Y~~~~~~~d-~~~~wd~~~~~~~~l~~-~~P~~~~~GNHE 234 (466)
++++|+|.+.... ..++.+.+. +||+|+++||++.. +...+ .......+.+.++.+.. .+|++.++||||
T Consensus 2 ~~iSDlHl~~~~~~~~~~~l~~l~~~~~~~d~lii~GDi~d~--~~~~~~~~~~~~~~~~~l~~L~~~~~~v~~v~GNHD 79 (231)
T TIGR01854 2 LFISDLHLSPERPDITALFLDFLREEARKADALYILGDLFEA--WIGDDDPSTLARSVAQAIRQVSDQGVPCYFMHGNRD 79 (231)
T ss_pred eEEEecCCCCCChhHHHHHHHHHHhhhccCCEEEEcCceecc--ccCCCCCCHHHHHHHHHHHHHHHCCCeEEEEcCCCc
Confidence 5799999875422 233444432 79999999999952 21100 01222444556666654 589999999999
Q ss_pred ee
Q 012311 235 IE 236 (466)
Q Consensus 235 ~~ 236 (466)
..
T Consensus 80 ~~ 81 (231)
T TIGR01854 80 FL 81 (231)
T ss_pred hh
Confidence 74
|
This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown. |
| >cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.26 E-value=0.00012 Score=67.28 Aligned_cols=167 Identities=15% Similarity=0.122 Sum_probs=93.9
Q ss_pred EEEEEccCCCCCCcH---HHHHHHHH-hCCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCceee
Q 012311 161 KFGIIGDLGQTYNSL---STLEHYME-SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIE 236 (466)
Q Consensus 161 ~f~v~GD~g~~~~~~---~tl~~~~~-~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~~ 236 (466)
++++++|+|...... ..+.++.+ .++|.|+|+||++.. ..+ +.++.+ ..|++.+.||||..
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~~~~d~iih~GDi~~~---------~~~----~~l~~~--~~~~~~V~GN~D~~ 65 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVPGKIQHVLCTGNLCSK---------ETY----DYLKTI--APDVHIVRGDFDEN 65 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhccCCCCEEEECCCCCCH---------HHH----HHHHhh--CCceEEEECCCCcc
Confidence 478999999554322 23344444 379999999999841 112 223332 24799999999953
Q ss_pred ccCcCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEEe
Q 012311 237 YMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLM 316 (466)
Q Consensus 237 ~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~~~~~~~Q~~WL~~~L~~~~r~~~~w~IV~~ 316 (466)
. .+|. ...+++++. +|.+.
T Consensus 66 ~-----------------~lp~---------~~~~~~~g~-----------------------------------~i~l~ 84 (178)
T cd07394 66 L-----------------NYPE---------TKVITVGQF-----------------------------------KIGLI 84 (178)
T ss_pred c-----------------cCCC---------cEEEEECCE-----------------------------------EEEEE
Confidence 1 1231 123444443 44444
Q ss_pred ccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccceecCCcccccCCCCCcEEEEeCCCCCCCCCCCCCCCCCCC
Q 012311 317 HVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPD 396 (466)
Q Consensus 317 H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~~~~~~~~~~~~~g~vyiv~G~gG~~~~~~~~~~~~~p~ 396 (466)
|--.+... .. .+.+..++.+.++|++++||.|.-.. ...++..+|-.|+.|.+.+. +.
T Consensus 85 HG~~~~~~-----~~---~~~~~~~~~~~~~dvii~GHTH~p~~------~~~~g~~viNPGSv~~~~~~--------~~ 142 (178)
T cd07394 85 HGHQVVPW-----GD---PDSLAALQRQLDVDILISGHTHKFEA------FEHEGKFFINPGSATGAFSP--------LD 142 (178)
T ss_pred ECCcCCCC-----CC---HHHHHHHHHhcCCCEEEECCCCcceE------EEECCEEEEECCCCCCCCCC--------CC
Confidence 53222111 01 12344566778999999999984211 12346888888887644210 00
Q ss_pred ccceeeCcccEEEEEEecCCeEEEEEEEcCCCce
Q 012311 397 YSAFREASYGHSTLEIKNRTHAFYHWNRNDDGKK 430 (466)
Q Consensus 397 ~sa~~~~~~G~~~l~v~n~t~l~~~~~~~~dg~~ 430 (466)
......|++|++.++ .+.+++++-.++++
T Consensus 143 ----~~~~~syail~~~~~-~~~~~~~~l~~~~~ 171 (178)
T cd07394 143 ----PNVIPSFVLMDIQGS-KVVTYVYQLIDGEV 171 (178)
T ss_pred ----CCCCCeEEEEEecCC-eEEEEEEEEECCcE
Confidence 011235889998544 46778876545543
|
Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl |
| >cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.23 E-value=1.9e-05 Score=76.55 Aligned_cols=174 Identities=13% Similarity=0.057 Sum_probs=87.3
Q ss_pred eEEEEEccCCCCC------CcHHH----HHHHHHhCCC-EEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEE
Q 012311 160 YKFGIIGDLGQTY------NSLST----LEHYMESGAQ-TVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIW 228 (466)
Q Consensus 160 ~~f~v~GD~g~~~------~~~~t----l~~~~~~~~d-fvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~ 228 (466)
++|+.++|++... ..... ++++.+.++| +++..||++....... +......++.+...-+-+.
T Consensus 1 l~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~------~~~~~~~~~~l~~~g~d~~ 74 (252)
T cd00845 1 LTILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPST------ATKGEANIELMNALGYDAV 74 (252)
T ss_pred CEEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchh------ccCCcHHHHHHHhcCCCEE
Confidence 5899999999553 23333 3444445677 7799999986433211 1111222232222234567
Q ss_pred cCCCceeeccCcCCcccccccccccccCCC-------CC---CCCCCCceEEEeeCCE--EEEEEcCCCC--C---C---
Q 012311 229 SAGNHEIEYMTYMGEVVPFKSYLHRYPTPH-------LA---SKSSSPLWYAIRRASA--HIIVLSSYSP--F---V--- 288 (466)
Q Consensus 229 ~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~-------~~---~~~~~~~yYsf~~g~v--~fI~Lds~~~--~---~--- 288 (466)
++||||++.... .+.........|. .+ .......|--++.+++ -|+.+.+... + +
T Consensus 75 ~~GNHe~d~g~~-----~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG~~~~~~~~~~~~~~~~ 149 (252)
T cd00845 75 TIGNHEFDYGLD-----ALAELYKDANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIGLTTPDTPTYTPLGWII 149 (252)
T ss_pred eeccccccccHH-----HHHHHHHhCCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEEeccccceeecCCCccc
Confidence 889999874321 1111111111110 00 0011234666788875 4555544221 0 0
Q ss_pred --CChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccceec
Q 012311 289 --KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYNIS 359 (466)
Q Consensus 289 --~~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~~ 359 (466)
......+-+++..+. .+.+...+|++.|.|... .. ++...+ .+||++++||.|...
T Consensus 150 ~~~~~~~~~~~~~~~~~-~~~~~D~vIvl~H~g~~~--------~~----~la~~~--~giDlvlggH~H~~~ 207 (252)
T cd00845 150 GLPFEDLAEAVAVAEEL-LAEGADVIILLSHLGLDD--------DE----ELAEEV--PGIDVILGGHTHHLL 207 (252)
T ss_pred CceecCHHHHHHHHHHH-HhCCCCEEEEEeccCccc--------hH----HHHhcC--CCccEEEcCCcCccc
Confidence 011223334332222 125778899999977643 01 111112 699999999998643
|
This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich |
| >COG1408 Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.21 E-value=8.9e-06 Score=80.26 Aligned_cols=75 Identities=19% Similarity=0.119 Sum_probs=57.4
Q ss_pred CCCeEEEEEccCCCCCCc---HHHHHHHHHhCCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCc
Q 012311 157 DASYKFGIIGDLGQTYNS---LSTLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNH 233 (466)
Q Consensus 157 ~~~~~f~v~GD~g~~~~~---~~tl~~~~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNH 233 (466)
..+++++.++|+|..... .+.+..+....||+|+.+||++..+. .+.+..+.+.++++.+..+++++.|||
T Consensus 42 ~~~~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~------~~~~~~~~~~L~~L~~~~gv~av~GNH 115 (284)
T COG1408 42 LQGLKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDR------PPGVAALALFLAKLKAPLGVFAVLGNH 115 (284)
T ss_pred cCCeEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCC------CCCHHHHHHHHHhhhccCCEEEEeccc
Confidence 458899999999987644 22233444458899999999997412 345577788889999999999999999
Q ss_pred eeec
Q 012311 234 EIEY 237 (466)
Q Consensus 234 E~~~ 237 (466)
|+..
T Consensus 116 d~~~ 119 (284)
T COG1408 116 DYGV 119 (284)
T ss_pred cccc
Confidence 9863
|
|
| >TIGR00583 mre11 DNA repair protein (mre11) | Back alignment and domain information |
|---|
Probab=98.20 E-value=0.00011 Score=75.96 Aligned_cols=107 Identities=13% Similarity=0.013 Sum_probs=55.7
Q ss_pred CeEEEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccceecCCcccccCCCCCcEEEEeCCCCCCCCCCCC
Q 012311 310 PWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGK 389 (466)
Q Consensus 310 ~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~~~~~~~~~~~~~g~vyiv~G~gG~~~~~~~~ 389 (466)
.+.|++.|+....... ...+ -+.+| ..++|++..||.|.-. ..+...+....+|+ - .|+.... .
T Consensus 201 ~fnIlv~Hq~~~~~~~-----~~~i---pe~ll-p~~fDYValGHiH~~~---~~p~~~~~~~~~V~-y-pGS~v~t--S 264 (405)
T TIGR00583 201 WFNLLVLHQNHAAHTS-----TSFL---PESFI-PDFFDLVIWGHEHECL---PDPVYNPSDGFYVL-Q-PGSTVAT--S 264 (405)
T ss_pred ceEEEEeCceecCCCC-----cccC---chhhh-hccCcEEEeccccccc---ccccccCCCCceEE-E-CCCcccc--c
Confidence 3579999998743211 1111 13444 4579999999987311 01111122222332 1 2343321 1
Q ss_pred CCCCCCCccceeeCcccEEEEEEecCCeEEEEEEEcCCCceeeeeeEEEEe
Q 012311 390 FRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGKKVATDSFILHN 440 (466)
Q Consensus 390 ~~~~~p~~sa~~~~~~G~~~l~v~n~t~l~~~~~~~~dg~~~~~D~~~i~k 440 (466)
+.+ -....-|+..|+|.+ ..+.++++.-+.-...+..++.+..
T Consensus 265 f~e-------~E~~~Kgv~lVeI~~-~~~~~~~IpL~~vRpf~~~~i~l~~ 307 (405)
T TIGR00583 265 LTP-------GEALPKHVFILNIKG-RKFASKPIPLQTVRPFVMKEILLDK 307 (405)
T ss_pred ccc-------cccCCCEEEEEEEcC-CeeEEEEeeCCCcccEEEEEEEhhh
Confidence 111 001335889999964 4577888875555555566666654
|
All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria. |
| >PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A | Back alignment and domain information |
|---|
Probab=98.17 E-value=1.1e-05 Score=75.32 Aligned_cols=175 Identities=18% Similarity=0.201 Sum_probs=84.1
Q ss_pred CeEEEEEccCCCCCCcHHHHHH-HHHhCCCEEEEcccccccccccccccchhHH--------------------------
Q 012311 159 SYKFGIIGDLGQTYNSLSTLEH-YMESGAQTVLFLGDLSYADRYQFIDVGVRWD-------------------------- 211 (466)
Q Consensus 159 ~~~f~v~GD~g~~~~~~~tl~~-~~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd-------------------------- 211 (466)
+-++++++|..........+-. +.+.++|+++++||+.-+... ...|.
T Consensus 5 ~~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~-----~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~ 79 (255)
T PF14582_consen 5 VRKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEAR-----SDEYERAQEEQREPDKSEINEEECYDSEALD 79 (255)
T ss_dssp --EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHH-----HHHHHHHHHTT----THHHHHHHHHHHHHHH
T ss_pred chhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchh-----hhHHHHHhhhccCcchhhhhhhhhhhHHHHH
Confidence 3478899998765443333333 334499999999999853221 12232
Q ss_pred HHHHHHHHHhhcCCeEEcCCCceeeccCcCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCCC-C---
Q 012311 212 SWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSP-F--- 287 (466)
Q Consensus 212 ~~~~~~~~l~~~~P~~~~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~-~--- 287 (466)
.|++.+.. ..+|.+++|||||....-.+. .+|..-.-.|.-- .-..-+.+--|..-|+.+..+.. .
T Consensus 80 ~ff~~L~~--~~~p~~~vPG~~Dap~~~~lr-----~a~~~e~v~p~~~---~vH~sf~~~~g~y~v~G~GGeI~~~~~~ 149 (255)
T PF14582_consen 80 KFFRILGE--LGVPVFVVPGNMDAPERFFLR-----EAYNAEIVTPHIH---NVHESFFFWKGEYLVAGMGGEITDDQRE 149 (255)
T ss_dssp HHHHHHHC--C-SEEEEE--TTS-SHHHHHH-----HHHHCCCC-TTEE---E-CTCEEEETTTEEEEEE-SEEESSS-B
T ss_pred HHHHHHHh--cCCcEEEecCCCCchHHHHHH-----HHhccceecccee---eeeeeecccCCcEEEEecCccccCCCcc
Confidence 45555543 379999999999973210000 1222111112100 00011233334577777766421 0
Q ss_pred ---CC--ChHHHHHHHHHHhhccCCCCCeEEEEecccc-ccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccc
Q 012311 288 ---VK--YTPQWEWLREELKKVDREKTPWLIVLMHVPI-YNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHY 356 (466)
Q Consensus 288 ---~~--~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~-y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~ 356 (466)
.. ...-.+|..+-|..+ +..-+|+++|.|+ +..+..|.+ + +++..|+++|+=++++|||.|
T Consensus 150 ~~~~LrYP~weaey~lk~l~el---k~~r~IlLfhtpPd~~kg~~h~G-S----~~V~dlIk~~~P~ivl~Ghih 216 (255)
T PF14582_consen 150 EEFKLRYPAWEAEYSLKFLREL---KDYRKILLFHTPPDLHKGLIHVG-S----AAVRDLIKTYNPDIVLCGHIH 216 (255)
T ss_dssp CSSS-EEEHHHHHHHHGGGGGC---TSSEEEEEESS-BTBCTCTBTTS-B----HHHHHHHHHH--SEEEE-SSS
T ss_pred ccccccchHHHHHHHHHHHHhc---ccccEEEEEecCCccCCCccccc-H----HHHHHHHHhcCCcEEEecccc
Confidence 00 122345555666664 3445788899999 554433432 2 356679999999999999976
|
|
| >cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.16 E-value=3.1e-06 Score=78.37 Aligned_cols=49 Identities=29% Similarity=0.446 Sum_probs=32.7
Q ss_pred CCCEEEEcccccccccccccccchhHHHH-HHHHHHHh-------------------hcCCeEEcCCCceeec
Q 012311 185 GAQTVLFLGDLSYADRYQFIDVGVRWDSW-GRFVERSA-------------------AYQPWIWSAGNHEIEY 237 (466)
Q Consensus 185 ~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~-~~~~~~l~-------------------~~~P~~~~~GNHE~~~ 237 (466)
+||.|+++||+.-. ++. . +..|.+. .++.+.+. ..+|++.++||||+..
T Consensus 44 ~Pd~V~fLGDLfd~-~w~-~--D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHDIG~ 112 (193)
T cd08164 44 KPDAVVVLGDLFSS-QWI-D--DEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHDVGY 112 (193)
T ss_pred CCCEEEEeccccCC-Ccc-c--HHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCcccCCC
Confidence 99999999999943 343 2 3445332 33333221 1489999999999975
|
Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the |
| >COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.15 E-value=0.00011 Score=68.92 Aligned_cols=171 Identities=17% Similarity=0.129 Sum_probs=100.7
Q ss_pred CeEEEEEccCCCCCCcHHHHHHHHHh-CCCEEEEcccccccccccccccchhHHHHHHH--HHHHh-hcCCeEEcCCCce
Q 012311 159 SYKFGIIGDLGQTYNSLSTLEHYMES-GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRF--VERSA-AYQPWIWSAGNHE 234 (466)
Q Consensus 159 ~~~f~v~GD~g~~~~~~~tl~~~~~~-~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~--~~~l~-~~~P~~~~~GNHE 234 (466)
.+|++.+.|.+........+..+.+. ++|+++.+||++|..-.+... -.+. ++.+. ..+|+++++||=|
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~-------~~~~~~~e~l~~~~~~v~avpGNcD 75 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEV-------AEELNKLEALKELGIPVLAVPGNCD 75 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchHH-------HHhhhHHHHHHhcCCeEEEEcCCCC
Confidence 67999999999887665555544444 899999999999543322110 0111 44444 5799999999966
Q ss_pred eeccCcCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCC--CCC----CCh-HHHHHHHHHHhhccCC
Q 012311 235 IEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYS--PFV----KYT-PQWEWLREELKKVDRE 307 (466)
Q Consensus 235 ~~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~--~~~----~~~-~Q~~WL~~~L~~~~r~ 307 (466)
...-. ....+ .... - -+ -+.+.|++.|+.+--.. ++. ..+ +-+.-|++-+++.+
T Consensus 76 ~~~v~--------~~l~~-~~~~-----v-~~--~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~-- 136 (226)
T COG2129 76 PPEVI--------DVLKN-AGVN-----V-HG--RVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKAD-- 136 (226)
T ss_pred hHHHH--------HHHHh-cccc-----c-cc--ceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhccc--
Confidence 43210 00000 0000 0 01 56778888888854322 121 122 22444555555532
Q ss_pred CCCeEEEEeccccccCCCcccccC--HHHHHHHHHHHHHcCCcEEEecccce
Q 012311 308 KTPWLIVLMHVPIYNSNEAHFMEG--ESMRAAFESWFVRYKVDYRISNLHYN 357 (466)
Q Consensus 308 ~~~w~IV~~H~P~y~s~~~h~~~~--~~~r~~l~~ll~~y~Vd~~~~gh~~~ 357 (466)
.+-.|+++|+|+|..... ...+ ..-...+..++++.+.-+.+|||.|.
T Consensus 137 -~~~~Il~~HaPP~gt~~d-~~~g~~hvGS~~vr~~ieefqP~l~i~GHIHE 186 (226)
T COG2129 137 -NPVNILLTHAPPYGTLLD-TPSGYVHVGSKAVRKLIEEFQPLLGLHGHIHE 186 (226)
T ss_pred -CcceEEEecCCCCCcccc-CCCCccccchHHHHHHHHHhCCceEEEeeecc
Confidence 111299999999986543 1112 11134555688899999999999874
|
|
| >COG1768 Predicted phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.13 E-value=4e-05 Score=68.83 Aligned_cols=184 Identities=17% Similarity=0.192 Sum_probs=93.3
Q ss_pred EEEEccCCCCCCcHHHHHHHHHh--CCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCceeeccC
Q 012311 162 FGIIGDLGQTYNSLSTLEHYMES--GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMT 239 (466)
Q Consensus 162 f~v~GD~g~~~~~~~tl~~~~~~--~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~~~~~ 239 (466)
.-|||+.-.+. ..++-++.... .-|.|+..||++.+...... .+=++++..+-. -=+.+.||||+....
T Consensus 19 M~vFGe~W~gh-~ekI~k~W~~~v~~eDiVllpGDiSWaM~l~ea------~~Dl~~i~~LPG--~K~m~rGNHDYWw~s 89 (230)
T COG1768 19 MEVFGEPWSGH-HEKIKKHWRSKVSPEDIVLLPGDISWAMRLEEA------EEDLRFIGDLPG--TKYMIRGNHDYWWSS 89 (230)
T ss_pred eeecCCcccCc-hHHHHHHHHhcCChhhEEEecccchhheechhh------hhhhhhhhcCCC--cEEEEecCCccccch
Confidence 44566643333 23333444333 45899999999987655322 112445544322 136799999996531
Q ss_pred cCCcccccccccccccCCCCCCCCCCCceE---EEeeCCEEEEEE---cCC-CCCCCChHH--------HHHHHHHHhhc
Q 012311 240 YMGEVVPFKSYLHRYPTPHLASKSSSPLWY---AIRRASAHIIVL---SSY-SPFVKYTPQ--------WEWLREELKKV 304 (466)
Q Consensus 240 ~~~~~~~f~~y~~rf~~P~~~~~~~~~~yY---sf~~g~v~fI~L---ds~-~~~~~~~~Q--------~~WL~~~L~~~ 304 (466)
.. .-.+. +|. -.+| .|.+++.-++.. |+- .++...++| +.-|+.-+.++
T Consensus 90 -~s------kl~n~--lp~-------~l~~~n~~f~l~n~aI~G~RgW~s~~~~~e~~te~Deki~~RE~~RLrlsa~a~ 153 (230)
T COG1768 90 -IS------KLNNA--LPP-------ILFYLNNGFELLNYAIVGVRGWDSPSFDSEPLTEQDEKIFLREIGRLRLSADAA 153 (230)
T ss_pred -HH------HHHhh--cCc-------hHhhhccceeEeeEEEEEeecccCCCCCcCccchhHHHHHHHHHHHHHHHHHHh
Confidence 10 00010 111 0111 244555333332 221 112223333 22233312221
Q ss_pred cCCCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccceecCCcccccCCCCCcEEEEeCC
Q 012311 305 DREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYNISSGDCFPVPDKSAPVYITVGD 379 (466)
Q Consensus 305 ~r~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~~~~~~~~~~~~~g~vyiv~G~ 379 (466)
-++...-.||+.|.|+++.... .+ .+..+|++++|+..++||-|.+..-... ..+-.|+-|+.+.+
T Consensus 154 l~k~~~~fivM~HYPP~s~~~t---~~-----~~sevlee~rv~~~lyGHlHgv~~p~~~-~s~v~Gi~y~Lvaa 219 (230)
T COG1768 154 LPKGVSKFIVMTHYPPFSDDGT---PG-----PFSEVLEEGRVSKCLYGHLHGVPRPNIG-FSNVRGIEYMLVAA 219 (230)
T ss_pred cccCcCeEEEEEecCCCCCCCC---Cc-----chHHHHhhcceeeEEeeeccCCCCCCCC-cccccCceEEEEec
Confidence 1234556799999999985432 12 4556888999999999998754321110 12334777766543
|
|
| >KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.12 E-value=2.7e-05 Score=81.95 Aligned_cols=174 Identities=16% Similarity=0.216 Sum_probs=96.5
Q ss_pred HHHHHHHHh--CCCEEEEcccccccccccccccchhHH---HHHHHHHHHhhcCCeEEcCCCceeeccCcCC--c--cc-
Q 012311 176 STLEHYMES--GAQTVLFLGDLSYADRYQFIDVGVRWD---SWGRFVERSAAYQPWIWSAGNHEIEYMTYMG--E--VV- 245 (466)
Q Consensus 176 ~tl~~~~~~--~~dfvl~~GDl~Y~~~~~~~d~~~~wd---~~~~~~~~l~~~~P~~~~~GNHE~~~~~~~~--~--~~- 245 (466)
.+|++|.++ ++|||++.||++--+.+.... +...+ ...+.+......+|++++.||||.-....+. . ..
T Consensus 199 s~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~-~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~F~~~~~~~~~ 277 (577)
T KOG3770|consen 199 SALDHIKENHKDIDYIIWTGDNVAHDVWAQTE-EENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNLFAPGSVPKRH 277 (577)
T ss_pred HHHHHHHhcCCCCCEEEEeCCCCcccchhhhH-HHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhhcCCCCCcchh
Confidence 346667766 599999999999655442111 11111 2233444556689999999999985321111 0 00
Q ss_pred ----cccccccccc--CCCCC-CCCCCCceEE-EeeCCEEEEEEcCCCCC----------CCChHHHHHHHHHHhhccCC
Q 012311 246 ----PFKSYLHRYP--TPHLA-SKSSSPLWYA-IRRASAHIIVLSSYSPF----------VKYTPQWEWLREELKKVDRE 307 (466)
Q Consensus 246 ----~f~~y~~rf~--~P~~~-~~~~~~~yYs-f~~g~v~fI~Lds~~~~----------~~~~~Q~~WL~~~L~~~~r~ 307 (466)
-+..+...|. .|... .....+-||. .-+++.++|+||+..-+ ..-.+|++||..+|.+++.
T Consensus 278 ~~~wly~~~~~~W~~wlp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~~~lqWf~~~L~~ae~- 356 (577)
T KOG3770|consen 278 SQLWLYKHLAGAWSTWLPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPIDQLQWFVDQLQEAES- 356 (577)
T ss_pred hhhHHHHHHHhhhhccCCHHHHhhhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCchHHhhHHHHHHHHHHh-
Confidence 0011111111 23221 1112345565 44588999999995311 1236789999999998753
Q ss_pred CCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHHcC--CcEEEecccc
Q 012311 308 KTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYK--VDYRISNLHY 356 (466)
Q Consensus 308 ~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~--Vd~~~~gh~~ 356 (466)
+..-+=+++|.|+-.. +.. +.--..+-.++.+|. |-.+++||.|
T Consensus 357 ~GekVhil~HIPpG~~---~c~--~~ws~~f~~iv~r~~~tI~gqf~GH~h 402 (577)
T KOG3770|consen 357 AGEKVHILGHIPPGDG---VCL--EGWSINFYRIVNRFRSTIAGQFYGHTH 402 (577)
T ss_pred cCCEEEEEEeeCCCCc---chh--hhhhHHHHHHHHHHHHhhhhhccccCc
Confidence 3344667789998431 111 111223444555552 3367888864
|
|
| >KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=98.11 E-value=2e-05 Score=80.27 Aligned_cols=115 Identities=18% Similarity=0.224 Sum_probs=73.4
Q ss_pred CCCeEEEEEccCCCCCCc-----HHH---------HHH---HHHh--CCCEEEEcccccccccccccccchhHHHHHHHH
Q 012311 157 DASYKFGIIGDLGQTYNS-----LST---------LEH---YMES--GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFV 217 (466)
Q Consensus 157 ~~~~~f~v~GD~g~~~~~-----~~t---------l~~---~~~~--~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~ 217 (466)
+..+|++.++|.|.-++. ... +.+ +.+. +||.++++||+..+..+.. +++|.+..+-+
T Consensus 46 ~n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~---~eEf~~~~~Rf 122 (410)
T KOG3662|consen 46 ENSTKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAG---DEEFKKRYERF 122 (410)
T ss_pred CCceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccCC---hHHHHHHHHHH
Confidence 468999999999875521 011 222 1222 9999999999996444332 45665543333
Q ss_pred HHHh---hcCCeEEcCCCceeeccCcCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCC
Q 012311 218 ERSA---AYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYS 285 (466)
Q Consensus 218 ~~l~---~~~P~~~~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~ 285 (466)
..+. .++|.+.++||||+++.... -.....||.-- .++...+|+.|+.-|+++|+..
T Consensus 123 kkIf~~k~~~~~~~i~GNhDIGf~~~~-----~~~~i~Rfe~~------fg~~~r~f~v~~~tf~~~d~~~ 182 (410)
T KOG3662|consen 123 KKIFGRKGNIKVIYIAGNHDIGFGNEL-----IPEWIDRFESV------FGPTERRFDVGNLTFVMFDSNA 182 (410)
T ss_pred HHhhCCCCCCeeEEeCCcccccccccc-----chhHHHHHHHh------hcchhhhhccCCceeEEeeehh
Confidence 3332 47999999999999854211 12233444311 1235678999999999999965
|
|
| >cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.02 E-value=0.00016 Score=71.24 Aligned_cols=87 Identities=13% Similarity=0.102 Sum_probs=48.1
Q ss_pred CceEEEeeC-CEEEEEEcCCCC----C-------C----CChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCcccc
Q 012311 266 PLWYAIRRA-SAHIIVLSSYSP----F-------V----KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFM 329 (466)
Q Consensus 266 ~~yYsf~~g-~v~fI~Lds~~~----~-------~----~~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~ 329 (466)
..|.-++.+ ++++-++.-..+ + + ...+..++..++|++ .++.-+|+++|.+........ .
T Consensus 128 ~~~~i~~~~~g~kVgviG~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~---~~~D~IIvl~H~g~~~~~~~~-~ 203 (277)
T cd07410 128 KPYVILERDVGVKVGIIGLTTPQIPNWEKPNLIGGLKFTDPVETAKKYVPKLRA---EGADVVVVLAHGGFERDLEES-L 203 (277)
T ss_pred CCEEEEEecCCCEEEEEecCCcccccccCcccCCCcEEcCHHHHHHHHHHHHHH---cCCCEEEEEecCCcCCCcccc-c
Confidence 356677888 865555443211 0 0 112234555555554 467889999999876432100 1
Q ss_pred cCHHHHHHHHHHHHH-cCCcEEEecccceec
Q 012311 330 EGESMRAAFESWFVR-YKVDYRISNLHYNIS 359 (466)
Q Consensus 330 ~~~~~r~~l~~ll~~-y~Vd~~~~gh~~~~~ 359 (466)
..+.. ...|.++ -+||++++||.|...
T Consensus 204 ~~~~~---~~~la~~~~~vD~IlgGHsH~~~ 231 (277)
T cd07410 204 TGENA---AYELAEEVPGIDAILTGHQHRRF 231 (277)
T ss_pred CCccH---HHHHHhcCCCCcEEEeCCCcccc
Confidence 11111 1233344 599999999998653
|
CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos |
| >cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.00 E-value=2.7e-05 Score=73.47 Aligned_cols=196 Identities=13% Similarity=0.025 Sum_probs=95.7
Q ss_pred EEEccCCCCCCcHH---HHHHHHH----hCCCEEEEcccccccccccccccchhHHH-HHHHHHHHhhcCCeEEcCCCce
Q 012311 163 GIIGDLGQTYNSLS---TLEHYME----SGAQTVLFLGDLSYADRYQFIDVGVRWDS-WGRFVERSAAYQPWIWSAGNHE 234 (466)
Q Consensus 163 ~v~GD~g~~~~~~~---tl~~~~~----~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~-~~~~~~~l~~~~P~~~~~GNHE 234 (466)
++++|+|.+..... .+..+.+ .+++.++++||++..-............. +....+......+++.++||||
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~v~GNHD 80 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLADRGTRVYYVPGNHD 80 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHHHCCCeEEEECCCch
Confidence 36899998764322 2223222 38999999999995321111100111112 2344555566889999999999
Q ss_pred eeccCcCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhcc------CCC
Q 012311 235 IEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVD------REK 308 (466)
Q Consensus 235 ~~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~~~~~~~Q~~WL~~~L~~~~------r~~ 308 (466)
..... .+..+..... .......+.+++.+++++-... +......+.|+...+.... ..-
T Consensus 81 ~~~~~---------~~~~~~~~~~-----~~~~~~~~~~~g~~~~~~HG~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (217)
T cd07398 81 FLLGD---------FFAEELGLIL-----LPDPLVHLELDGKRILLEHGDQ-FDTDDRAYQLLRRLGRNPYDQLLFLNRP 145 (217)
T ss_pred HHHHh---------HHHHHcCCEE-----eccceEEEeeCCeEEEEECCCc-CchhHHHHHHHHHHhCcHHHHHHHhcch
Confidence 75321 1111100000 0011215677888888887643 2233445555554322100 000
Q ss_pred CCeEEEEeccccccC----CCccc--ccCHHHHHHHHHHHHHcCCcEEEecccceecCCcccccCCCCCcEEEEeCC
Q 012311 309 TPWLIVLMHVPIYNS----NEAHF--MEGESMRAAFESWFVRYKVDYRISNLHYNISSGDCFPVPDKSAPVYITVGD 379 (466)
Q Consensus 309 ~~w~IV~~H~P~y~s----~~~h~--~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~~~~~~~~~~~~~g~vyiv~G~ 379 (466)
..|+.-........+ ..... .......+.+..++.+++++.+++||.|.-. .. ..++..|+..|+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~--~~----~~~~~~~~n~G~ 216 (217)
T cd07398 146 LNRRRGIAGGLRWSSRYLKKKVKKAVAIIDVFEEAVARLARRKGVDGVICGHTHRPA--LH----ELDGKLYINLGD 216 (217)
T ss_pred HHHHHHHHHhhhhhhHHHHhCccchHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCC--eE----EECCEEEEECCC
Confidence 000000001111100 00000 0112345566778899999999999987421 11 123678888775
|
YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l |
| >cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.00015 Score=70.78 Aligned_cols=173 Identities=14% Similarity=0.136 Sum_probs=84.6
Q ss_pred eEEEEEccCCCCC-------CcHHHHH----HHHHhCCC-EEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeE
Q 012311 160 YKFGIIGDLGQTY-------NSLSTLE----HYMESGAQ-TVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWI 227 (466)
Q Consensus 160 ~~f~v~GD~g~~~-------~~~~tl~----~~~~~~~d-fvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~ 227 (466)
+|++.+.|++.-. .....+. ++.+.+++ ++|.+||++...... + ..+.....+.++.+ . .-+
T Consensus 1 ~~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~--~-~~~g~~~~~~l~~l--~-~d~ 74 (257)
T cd07406 1 FTILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLS--T-ATKGKQMVPVLNAL--G-VDL 74 (257)
T ss_pred CeEEEEccceeecccCCCCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccch--h-hcCCccHHHHHHhc--C-CcE
Confidence 4677777776211 1223333 33334677 899999998532211 1 00111222333322 1 236
Q ss_pred EcCCCceeeccCcCCcccccccccccccCCC---------C-CCCCCCCceEEEeeCCEE--EEEEcCCCCC--------
Q 012311 228 WSAGNHEIEYMTYMGEVVPFKSYLHRYPTPH---------L-ASKSSSPLWYAIRRASAH--IIVLSSYSPF-------- 287 (466)
Q Consensus 228 ~~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~---------~-~~~~~~~~yYsf~~g~v~--fI~Lds~~~~-------- 287 (466)
.++||||++.... .+.........|. . ..-..-+.|.-++.++++ ||.+.+....
T Consensus 75 ~~~GNHefd~g~~-----~l~~~~~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG~~~~~~~~~~~~~~~ 149 (257)
T cd07406 75 ACFGNHEFDFGED-----QLQKRLGESKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLGLVEEEWLETLTIDPE 149 (257)
T ss_pred EeecccccccCHH-----HHHHHHhhCCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEEEecccccccccCCCC
Confidence 7899999965321 0111111111110 0 000112467888889855 5555443210
Q ss_pred C-CChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHH-cCCcEEEeccccee
Q 012311 288 V-KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVR-YKVDYRISNLHYNI 358 (466)
Q Consensus 288 ~-~~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~-y~Vd~~~~gh~~~~ 358 (466)
+ ....-.+.+++.+++..+.+..-+|++.|.+... ... +.++ .+||++++||.|..
T Consensus 150 ~~~~~d~~~~~~~~v~~~~~~~~D~iVvl~H~g~~~--------d~~-------la~~~~~iD~IlgGH~H~~ 207 (257)
T cd07406 150 YVRYRDYVETARELVDELREQGADLIIALTHMRLPN--------DKR-------LAREVPEIDLILGGHDHEY 207 (257)
T ss_pred cceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh--------hHH-------HHHhCCCCceEEeccccee
Confidence 0 0112233344444333235788899999987521 111 2222 48999999998854
|
CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th |
| >cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.00021 Score=70.90 Aligned_cols=92 Identities=11% Similarity=0.021 Sum_probs=47.6
Q ss_pred ceEEEeeCCEE--EEEEcCCC-CC--------C-CChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCcccccCHHH
Q 012311 267 LWYAIRRASAH--IIVLSSYS-PF--------V-KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESM 334 (466)
Q Consensus 267 ~yYsf~~g~v~--fI~Lds~~-~~--------~-~~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~~~~~~ 334 (466)
.|.-++.++++ ||.|-+.. .. + ....-.+-+++.+++....+..-+|++.|......... . ..+..
T Consensus 138 py~i~~~~G~kIgviGl~~~~~~~~~~~~~~~g~~f~d~~e~~~~~v~~lr~~~~D~IIvL~H~G~~~~~~~-~-~~~~~ 215 (288)
T cd07412 138 PYTIKDVGGVKVGFIGAVTKDTPNLVSPDGVAGLEFTDEVEAINAVAPELKAGGVDAIVVLAHEGGSTKGGD-D-TCSAA 215 (288)
T ss_pred CEEEEEECCEEEEEEeecCCCccceeccccccCceEcCHHHHHHHHHHHHHHCCCCEEEEEeCCCCCCCCCC-c-ccccc
Confidence 45667888854 55553321 00 1 01222334555444443256888999999876542211 0 00111
Q ss_pred HHHHHHHHHH--cCCcEEEecccceecC
Q 012311 335 RAAFESWFVR--YKVDYRISNLHYNISS 360 (466)
Q Consensus 335 r~~l~~ll~~--y~Vd~~~~gh~~~~~~ 360 (466)
......++.+ -+||++++||.|....
T Consensus 216 ~~~~~~l~~~~~~~iD~IlgGHsH~~~~ 243 (288)
T cd07412 216 SGPIADIVNRLDPDVDVVFAGHTHQAYN 243 (288)
T ss_pred ChhHHHHHhhcCCCCCEEEeCccCcccc
Confidence 1122233444 4899999999986543
|
YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi |
| >cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00088 Score=65.13 Aligned_cols=190 Identities=14% Similarity=0.132 Sum_probs=98.8
Q ss_pred EEEEEccCCCCCCc---HHHHHHHHHh-CCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCceee
Q 012311 161 KFGIIGDLGQTYNS---LSTLEHYMES-GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIE 236 (466)
Q Consensus 161 ~f~v~GD~g~~~~~---~~tl~~~~~~-~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~~ 236 (466)
|++++||.=....- ...+.++.+. ++||++..||++-..... . ....+.+..+ .+- ..+.||||++
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl----~---~~~~~~L~~~--G~D-~iTlGNH~fD 70 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGI----T---PKIAKELLSA--GVD-VITMGNHTWD 70 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCC----C---HHHHHHHHhc--CCC-EEEecccccC
Confidence 57889997433321 2234445444 799999999998643111 1 1112222222 333 4566999997
Q ss_pred ccCcCCcccccccccccc---cCCCCCC-CCCCCceEEEeeCCEEEEEEcCCCCCC--CChHHHHHHHHHHhhccCCCCC
Q 012311 237 YMTYMGEVVPFKSYLHRY---PTPHLAS-KSSSPLWYAIRRASAHIIVLSSYSPFV--KYTPQWEWLREELKKVDREKTP 310 (466)
Q Consensus 237 ~~~~~~~~~~f~~y~~rf---~~P~~~~-~~~~~~yYsf~~g~v~fI~Lds~~~~~--~~~~Q~~WL~~~L~~~~r~~~~ 310 (466)
.. +. ..+.... -.|.|-+ ......|.-++.+++.+-+++-..... ....=.+-+++.+++... ++.
T Consensus 71 ~g----el---~~~l~~~~~~l~~aN~~~~~pg~~~~i~~~~G~kIaVigl~g~~~~~~~~~P~~~~~~~v~~lk~-~~D 142 (255)
T cd07382 71 KK----EI---LDFIDEEPRLLRPANYPPGTPGRGYGVVEVNGKKIAVINLMGRVFMPPLDNPFRAADELLEELKE-EAD 142 (255)
T ss_pred cc----hH---HHHHhcCcCceEeeecCCCCCCCCeEEEEECCEEEEEEEEecccCCCcCCCHHHHHHHHHHHHhc-CCC
Confidence 53 11 1111111 0111110 112345777888886665555421111 111113335555555432 678
Q ss_pred eEEEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccceecCCcccccCCCCCcEEEE-eCCCCCC
Q 012311 311 WLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYNISSGDCFPVPDKSAPVYIT-VGDGGNQ 383 (466)
Q Consensus 311 w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~~~~~~~~~~~~~g~vyiv-~G~gG~~ 383 (466)
-+||.+|.-.- ..+.+|.. ...-+||.++.+|.|-...+.. .-++|+.||+ +|.-|..
T Consensus 143 ~IIV~~H~g~t-----------sEk~ala~-~ldg~VdvIvGtHTHv~t~d~~---il~~gTa~itd~Gm~G~~ 201 (255)
T cd07382 143 IIFVDFHAEAT-----------SEKIALGW-YLDGRVSAVVGTHTHVQTADER---ILPGGTAYITDVGMTGPY 201 (255)
T ss_pred EEEEEECCCCC-----------HHHHHHHH-hCCCCceEEEeCCCCccCCccE---EeeCCeEEEecCccccCC
Confidence 89999997321 11223332 2233699999999986544331 1357898987 4445544
|
DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.0003 Score=68.85 Aligned_cols=155 Identities=14% Similarity=0.033 Sum_probs=76.4
Q ss_pred HHHHHHh-CCCEE-EEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCceeeccCcCCccccccccccccc
Q 012311 178 LEHYMES-GAQTV-LFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYP 255 (466)
Q Consensus 178 l~~~~~~-~~dfv-l~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~~~~~~~~~~~~f~~y~~rf~ 255 (466)
++++.+. .++.+ +.+||+....... . ........+. +..+++.++.||||++.... .+......+.
T Consensus 42 v~~~~~~~~~~~l~l~~GD~~~gs~~~--~-~~~g~~~~~~----l~~~g~da~~GNHefd~g~~-----~l~~~~~~~~ 109 (264)
T cd07411 42 IKRIRAERNPNTLLLDGGDTWQGSGEA--L-YTRGQAMVDA----LNALGVDAMVGHWEFTYGPE-----RVRELFGRLN 109 (264)
T ss_pred HHHHHHhcCCCeEEEeCCCccCCChHH--h-hcCChhHHHH----HHhhCCeEEecccccccCHH-----HHHHHHhhCC
Confidence 3444445 78876 6799999543211 0 1111222222 23356555559999875321 1111111111
Q ss_pred CCCC-------CC-CCCCCceEEEeeCC--EEEEEEcCCCCCC----------CChHHHHHHHHHHhhcc-CCCCCeEEE
Q 012311 256 TPHL-------AS-KSSSPLWYAIRRAS--AHIIVLSSYSPFV----------KYTPQWEWLREELKKVD-REKTPWLIV 314 (466)
Q Consensus 256 ~P~~-------~~-~~~~~~yYsf~~g~--v~fI~Lds~~~~~----------~~~~Q~~WL~~~L~~~~-r~~~~w~IV 314 (466)
.|.- +. ......|.-++.++ +-||.+.+..... ......+.+++.+++.. ..+..-+|+
T Consensus 110 ~~~l~aN~~~~~~~~~~~~~~~i~~~~g~kVgviG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iI~ 189 (264)
T cd07411 110 WPFLAANVYDDEAGERVFPPYRIKEVGGVKIGVIGQTFPYVPIANPPRFTPGLTFGIREEELQEVVVKLRREEGVDVVVL 189 (264)
T ss_pred CCEEEEEEEeCCCCCcccCCEEEEEECCEEEEEEEeccCCcccccCcCCCCCcEECCHHHHHHHHHHHHHHhCCCCEEEE
Confidence 1110 00 00112466678887 4556665431100 01234455555543322 246788999
Q ss_pred EeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEeccccee
Q 012311 315 LMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYNI 358 (466)
Q Consensus 315 ~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~ 358 (466)
+.|.+... ...+.+.+ .+||++++||.|..
T Consensus 190 l~H~g~~~--------~~~la~~~------~~iDlilgGH~H~~ 219 (264)
T cd07411 190 LSHNGLPV--------DVELAERV------PGIDVILSGHTHER 219 (264)
T ss_pred EecCCchh--------hHHHHhcC------CCCcEEEeCccccc
Confidence 99987531 11122111 58999999999854
|
SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy |
| >TIGR00619 sbcd exonuclease SbcD | Back alignment and domain information |
|---|
Probab=97.81 E-value=5.4e-05 Score=73.68 Aligned_cols=73 Identities=14% Similarity=0.140 Sum_probs=48.0
Q ss_pred eEEEEEccCCCCCCc---------HHHHHHH----HHhCCCEEEEcccccccccccccccchhHHHHHHHHHHHhh-c-C
Q 012311 160 YKFGIIGDLGQTYNS---------LSTLEHY----MESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAA-Y-Q 224 (466)
Q Consensus 160 ~~f~v~GD~g~~~~~---------~~tl~~~----~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~-~-~ 224 (466)
+||+.++|+|.+... ...++.+ .+.++|+|+++||++...... ......+.++++.+.. . +
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~----~~~~~~~~~~l~~l~~~~~i 76 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPP----AEAQELFNAFFRNLSDANPI 76 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCC----HHHHHHHHHHHHHHHhcCCc
Confidence 489999999976421 1233333 344899999999999533221 1223345556666543 3 8
Q ss_pred CeEEcCCCceee
Q 012311 225 PWIWSAGNHEIE 236 (466)
Q Consensus 225 P~~~~~GNHE~~ 236 (466)
|+++++||||..
T Consensus 77 ~v~~i~GNHD~~ 88 (253)
T TIGR00619 77 PIVVISGNHDSA 88 (253)
T ss_pred eEEEEccCCCCh
Confidence 999999999974
|
This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). |
| >COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=97.72 E-value=4.5e-05 Score=78.97 Aligned_cols=73 Identities=25% Similarity=0.133 Sum_probs=49.4
Q ss_pred eEEEEEccCCCCC---Cc-------H----HHHHHHHHhCCCEEEEcccccccccccccccchhHHHHHHHHHHHh-hcC
Q 012311 160 YKFGIIGDLGQTY---NS-------L----STLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSA-AYQ 224 (466)
Q Consensus 160 ~~f~v~GD~g~~~---~~-------~----~tl~~~~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~-~~~ 224 (466)
+||+.++|+|.+. +. . ..++.+.++++||||++||+......+ ...-..+.+.++.+. ..+
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps----~~a~~~~~~~l~~l~~~~I 76 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPS----PRALKLFLEALRRLKDAGI 76 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCC----HHHHHHHHHHHHHhccCCC
Confidence 4899999999882 11 1 223344556999999999999653322 122234455555553 479
Q ss_pred CeEEcCCCceee
Q 012311 225 PWIWSAGNHEIE 236 (466)
Q Consensus 225 P~~~~~GNHE~~ 236 (466)
|++++.||||..
T Consensus 77 pv~~I~GNHD~~ 88 (390)
T COG0420 77 PVVVIAGNHDSP 88 (390)
T ss_pred cEEEecCCCCch
Confidence 999999999975
|
|
| >cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00041 Score=67.68 Aligned_cols=178 Identities=12% Similarity=0.048 Sum_probs=85.2
Q ss_pred eEEEEEccCCCCC-------CcHHHHHHH----HHhCCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEE
Q 012311 160 YKFGIIGDLGQTY-------NSLSTLEHY----MESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIW 228 (466)
Q Consensus 160 ~~f~v~GD~g~~~-------~~~~tl~~~----~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~ 228 (466)
+|++.++|+|... .....++.+ .+.+.++++.+||++..... .. ........+.+..+ ...+ .
T Consensus 1 i~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~--~~-~~~g~~~~~~ln~~--g~d~-~ 74 (257)
T cd07408 1 ITILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPI--SD-LDKGETIIKIMNAV--GYDA-V 74 (257)
T ss_pred CEEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchh--hh-hcCCcHHHHHHHhc--CCcE-E
Confidence 4788899998642 123333333 22256899999999853211 00 00111112222221 3344 5
Q ss_pred cCCCceeeccCcCCcccccccccccccCCCC-------CCC-CCCCceEEEeeC-C--EEEEEEcCCC-C-----C---C
Q 012311 229 SAGNHEIEYMTYMGEVVPFKSYLHRYPTPHL-------ASK-SSSPLWYAIRRA-S--AHIIVLSSYS-P-----F---V 288 (466)
Q Consensus 229 ~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~~-------~~~-~~~~~yYsf~~g-~--v~fI~Lds~~-~-----~---~ 288 (466)
++||||+++... .+..+...+..|.- ..+ ..-..|--++.+ + +-||.+-+.. . . +
T Consensus 75 ~~GNHefd~G~~-----~l~~~~~~~~~~~l~aNv~~~~~~~~~~~py~i~~~~~G~kIgviG~~~~~~~~~~~~~~~~~ 149 (257)
T cd07408 75 TPGNHEFDYGLD-----RLKELSKEADFPFLSANVYDNDTGKRVFKPYKIKELGNGVKVGVIGLTTPETATKTHPKNVKD 149 (257)
T ss_pred ccccccccCCHH-----HHHHHHhhCCCCEEEEEEEEcCCCCcccCCEEEEEcCCCCEEEEEeecCcCcccccCccccCC
Confidence 789999875321 11112222222211 000 011235556777 6 5566665431 0 0 0
Q ss_pred C-----ChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccceec
Q 012311 289 K-----YTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYNIS 359 (466)
Q Consensus 289 ~-----~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~~ 359 (466)
. ...-.+|+...|++ .++.-+|++.|.+...... +.. ...+.. .-.+||+++.||.|...
T Consensus 150 ~~~~d~~~~~~~~~v~~l~~---~~~D~iIvl~H~G~~~~~~----~~~--~~~la~--~~~giDvIigGH~H~~~ 214 (257)
T cd07408 150 VTFEDPIEEAKKVIVAALKA---KGADVIVALGHLGVDRTSS----PWT--STELAA--NVTGIDLIIDGHSHTTI 214 (257)
T ss_pred cEEecHHHHHHHHHHHHHHh---CCCCEEEEEeCcCcCCCCC----Ccc--HHHHHH--hCCCceEEEeCCCcccc
Confidence 0 11112332333333 5688899999988754321 111 112222 12489999999998654
|
SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet |
| >TIGR00282 metallophosphoesterase, MG_246/BB_0505 family | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.0061 Score=59.56 Aligned_cols=197 Identities=16% Similarity=0.079 Sum_probs=103.4
Q ss_pred eEEEEEccCCCCCCc---HHHHHHHHHh-CCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCcee
Q 012311 160 YKFGIIGDLGQTYNS---LSTLEHYMES-GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEI 235 (466)
Q Consensus 160 ~~f~v~GD~g~~~~~---~~tl~~~~~~-~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~ 235 (466)
.|++++||.=....- ...|..+.+. ++||++..||++-.. ... . ....+.+. ...+-++ +.|||++
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG-~Gi---~---~~~~~~L~--~~GvDvi-T~GNH~~ 70 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHG-KGL---T---LKIYEFLK--QSGVNYI-TMGNHTW 70 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCC-CCC---C---HHHHHHHH--hcCCCEE-Eccchhc
Confidence 378999998432211 1234445444 899999999999532 111 1 11122222 1245554 4599999
Q ss_pred eccCcCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCC-CCC-C--ChHHHHHHHHHHhhccCCCCCe
Q 012311 236 EYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYS-PFV-K--YTPQWEWLREELKKVDREKTPW 311 (466)
Q Consensus 236 ~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~-~~~-~--~~~Q~~WL~~~L~~~~r~~~~w 311 (466)
+..................+.|. ...+..|..++.++..+-+++-.. .+. . ...=.+-+++.+++.. .+++.
T Consensus 71 Dkge~~~~i~~~~~~lrpanyp~---~~pG~g~~i~~~nG~kiaVinl~G~~fm~~~~~~~Pf~~~d~~i~~lk-~~~d~ 146 (266)
T TIGR00282 71 FQKLILDVVINQKDLVRPLNFDT---SFAGKGSLVFEFNGAKIAVTNLQGTSVNLPFKTTNPFKVLKELINMLK-KDCDL 146 (266)
T ss_pred cCcHHHHHHhccccccccCCCCC---CCCCCCcEEEEECCEEEEEEECCCcccCCccccCCHHHHHHHHHHhhh-cCCCE
Confidence 75310000000000111112222 122334667788887766665421 111 1 0111122333444332 24778
Q ss_pred EEEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccceecCCcccccCCCCCcEEEE-eCCCCCCCC
Q 012311 312 LIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYNISSGDCFPVPDKSAPVYIT-VGDGGNQEG 385 (466)
Q Consensus 312 ~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~~~~~~~~~~~~~g~vyiv-~G~gG~~~~ 385 (466)
+||.+|.-. +.. +....++.+-+||.++.-|.|=...+.. .-++|+.||+ +|.-|...+
T Consensus 147 IIVd~Haea-----------tsE-K~a~~~~ldg~vsaVvGtHtHV~TaD~~---il~~gtayitD~Gm~G~~~s 206 (266)
T TIGR00282 147 IFVDFHAET-----------TSE-KNAFGMAFDGYVTAVVGTHTHVPTADLR---ILPKGTAYITDVGMTGPFGS 206 (266)
T ss_pred EEEEeCCCC-----------HHH-HHHHHHHhCCCccEEEeCCCCCCCCcce---eCCCCCEEEecCCcccCccc
Confidence 999999532 122 3446688889999999999874443322 2367999998 566666543
|
A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase. |
| >PRK10966 exonuclease subunit SbcD; Provisional | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00024 Score=73.90 Aligned_cols=73 Identities=19% Similarity=0.178 Sum_probs=45.8
Q ss_pred eEEEEEccCCCCCC----c-----HHHHHH----HHHhCCCEEEEcccccccccccccccchhHHHHHHHHHHHhh-cCC
Q 012311 160 YKFGIIGDLGQTYN----S-----LSTLEH----YMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAA-YQP 225 (466)
Q Consensus 160 ~~f~v~GD~g~~~~----~-----~~tl~~----~~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~-~~P 225 (466)
+||+.++|+|.+.. . ...++. +.+.+||+||++||+....... ......+.+++..+.. .+|
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~----~~a~~~~~~~l~~L~~~~~~ 76 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPP----SYARELYNRFVVNLQQTGCQ 76 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCc----HHHHHHHHHHHHHHHhcCCc
Confidence 48999999998632 1 011232 3345999999999998432211 1112233445444433 589
Q ss_pred eEEcCCCceee
Q 012311 226 WIWSAGNHEIE 236 (466)
Q Consensus 226 ~~~~~GNHE~~ 236 (466)
+++++||||..
T Consensus 77 v~~I~GNHD~~ 87 (407)
T PRK10966 77 LVVLAGNHDSV 87 (407)
T ss_pred EEEEcCCCCCh
Confidence 99999999974
|
|
| >PRK09453 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00026 Score=65.26 Aligned_cols=75 Identities=21% Similarity=0.241 Sum_probs=43.5
Q ss_pred eEEEEEccCCCCCCcHHH-HHHHHHhCCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCceee
Q 012311 160 YKFGIIGDLGQTYNSLST-LEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIE 236 (466)
Q Consensus 160 ~~f~v~GD~g~~~~~~~t-l~~~~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~~ 236 (466)
.|+++++|+|......+. ++.+.+.++|.++++||++..............++..+.++.+ ..|++++.||||..
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~--~~~v~~V~GNhD~~ 76 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY--ADKIIAVRGNCDSE 76 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc--CCceEEEccCCcch
Confidence 379999999965433222 3334445899999999998532110000000122233333322 35899999999964
|
|
| >PHA02546 47 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00034 Score=71.09 Aligned_cols=74 Identities=19% Similarity=0.110 Sum_probs=45.8
Q ss_pred eEEEEEccCCCCCCc---------HHHHHHH----HHhCCCEEEEcccccccccccccccchhHHHHHH-HHHHHh-hcC
Q 012311 160 YKFGIIGDLGQTYNS---------LSTLEHY----MESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGR-FVERSA-AYQ 224 (466)
Q Consensus 160 ~~f~v~GD~g~~~~~---------~~tl~~~----~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~-~~~~l~-~~~ 224 (466)
+||+.++|+|.+... ...++++ .++++|+||++||+.-...... ........+ +++.+. ..+
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~---~~~~~~~~~~l~~~L~~~gi 77 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAIT---QNTMNFVREKIFDLLKEAGI 77 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCC---HHHHHHHHHHHHHHHHHCCC
Confidence 489999999986421 1234433 3459999999999984321111 112222222 233443 369
Q ss_pred CeEEcCCCceee
Q 012311 225 PWIWSAGNHEIE 236 (466)
Q Consensus 225 P~~~~~GNHE~~ 236 (466)
|++.++||||..
T Consensus 78 ~v~~I~GNHD~~ 89 (340)
T PHA02546 78 TLHVLVGNHDMY 89 (340)
T ss_pred eEEEEccCCCcc
Confidence 999999999974
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0023 Score=75.30 Aligned_cols=190 Identities=15% Similarity=0.072 Sum_probs=92.9
Q ss_pred CCCeEEEEEccCCCCCCcHHH----HHHHHHhCCCEEEE-cccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCC
Q 012311 157 DASYKFGIIGDLGQTYNSLST----LEHYMESGAQTVLF-LGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAG 231 (466)
Q Consensus 157 ~~~~~f~v~GD~g~~~~~~~t----l~~~~~~~~dfvl~-~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~G 231 (466)
...++++.++|+|........ ++++.+.+++.++. +||++...... . ...+....+.+.. --.-+.++|
T Consensus 658 ~~~l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~--~-~~~g~~~~~~ln~---lg~d~~~~G 731 (1163)
T PRK09419 658 NWELTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYS--N-LLKGLPVLKMMKE---MGYDASTFG 731 (1163)
T ss_pred ceEEEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchh--h-hcCChHHHHHHhC---cCCCEEEec
Confidence 357999999999965433333 34444457887755 99998532111 0 0111222222222 123366999
Q ss_pred CceeeccCcC-----Cccc-----------ccccccc-cccCCCCCCCCCCCceEEEeeCCE--EEEEEcCCC-C-----
Q 012311 232 NHEIEYMTYM-----GEVV-----------PFKSYLH-RYPTPHLASKSSSPLWYAIRRASA--HIIVLSSYS-P----- 286 (466)
Q Consensus 232 NHE~~~~~~~-----~~~~-----------~f~~y~~-rf~~P~~~~~~~~~~yYsf~~g~v--~fI~Lds~~-~----- 286 (466)
|||++..... .... +|.-..+ .+.............|.-++.+++ -||.|-+.. .
T Consensus 732 NHEfd~g~~~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G~kIgiiGltt~~~~~~~~p 811 (1163)
T PRK09419 732 NHEFDWGPDVLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNGKKVGFIGLTTPETAYKTSP 811 (1163)
T ss_pred ccccccChHHHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECCEEEEEEEecccccccccCC
Confidence 9999754210 0000 0100000 000000000011234666788874 456654421 0
Q ss_pred C---C-CChHHHHHHHHHHhhcc-CCCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHHc-CCcEEEecccceec
Q 012311 287 F---V-KYTPQWEWLREELKKVD-REKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRY-KVDYRISNLHYNIS 359 (466)
Q Consensus 287 ~---~-~~~~Q~~WL~~~L~~~~-r~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y-~Vd~~~~gh~~~~~ 359 (466)
. + ......+.+++..++.. ..+..-+|++.|......... .+++ ...|.++. +||+++.||.|...
T Consensus 812 ~~~~~l~f~d~~e~~~~~v~~Lr~~~~~D~VV~LsH~G~~~d~~~--~~~~-----~~~lA~~v~gIDvIigGHsH~~~ 883 (1163)
T PRK09419 812 GNVKNLEFKDPAEAAKKWVKELKEKEKVDAIIALTHLGSNQDRTT--GEIT-----GLELAKKVKGVDAIISAHTHTLV 883 (1163)
T ss_pred CCcCCcEEcCHHHHHHHHHHHHHhhcCCCEEEEEecCCccccccc--cccH-----HHHHHHhCCCCCEEEeCCCCccc
Confidence 0 0 01222334444444432 246888999999987532111 1121 12333333 89999999998654
|
|
| >COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0032 Score=67.68 Aligned_cols=189 Identities=15% Similarity=0.105 Sum_probs=100.2
Q ss_pred CCCCCCCeEEEEEccCCCCCC------------cHHH----HHHHHHh-CCCEEEEcccccccccccccccchhHHHHHH
Q 012311 153 KIDPDASYKFGIIGDLGQTYN------------SLST----LEHYMES-GAQTVLFLGDLSYADRYQFIDVGVRWDSWGR 215 (466)
Q Consensus 153 ~~g~~~~~~f~v~GD~g~~~~------------~~~t----l~~~~~~-~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~ 215 (466)
+.....+++|+...|+|..-. .... ++++.+. +..++|.+||++...... ++...+..-.+
T Consensus 20 ~~~~~~~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~--~~~~~g~~~~~ 97 (517)
T COG0737 20 AAAETVKLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLS--DYLTKGEPTVD 97 (517)
T ss_pred cccCceeEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCcccc--ccccCCChHHH
Confidence 333456899999999986533 2222 2333333 456789999999643322 11111111222
Q ss_pred HHHHHhhcCCe-EEcCCCceeeccCcCCcccccccccccccCCC---C-----C-CCCCCCceEEEeeCCE--EEEEEcC
Q 012311 216 FVERSAAYQPW-IWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPH---L-----A-SKSSSPLWYAIRRASA--HIIVLSS 283 (466)
Q Consensus 216 ~~~~l~~~~P~-~~~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~---~-----~-~~~~~~~yYsf~~g~v--~fI~Lds 283 (466)
.|. .+++ ..++||||+++..+ .+..+......|. | . ......-|.-++.+++ -+|.+.+
T Consensus 98 ~mN----~m~yDa~tiGNHEFd~g~~-----~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~KIgiIG~~~ 168 (517)
T COG0737 98 LLN----ALGYDAMTLGNHEFDYGLE-----ALARLLDEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGVKIGIIGLTT 168 (517)
T ss_pred HHh----hcCCcEEeecccccccCHH-----HHHHHHhccCCceEEeeeEecCCCCccCcCCeEEEecCCeEEEEEEecC
Confidence 332 3333 68999999986421 0111111111120 0 0 0112356788888874 5566654
Q ss_pred CC--CC---C-----CChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEec
Q 012311 284 YS--PF---V-----KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISN 353 (466)
Q Consensus 284 ~~--~~---~-----~~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~g 353 (466)
-. .+ + ......+++++.+.+.......-+|++.|.+....... ....+....... .++|..+.|
T Consensus 169 ~~~~~~~~~~~~~~~~f~d~~e~~~~~i~elk~~~vD~iI~LsH~G~~~d~~~-~~~~~~~~~~~~-----~~iD~i~~G 242 (517)
T COG0737 169 PTIPTWEKPNAIEGVTFRDPIEAAKKYIPELKGEGVDVIIALSHLGIEDDLEL-ASEVPGDVDVAV-----PGIDLIIGG 242 (517)
T ss_pred CcccccccccccCCcEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCcCccccc-cccccccccccc-----cCcceEecc
Confidence 11 11 1 12345667777777664444788999999998754331 111111111111 459999999
Q ss_pred cccee
Q 012311 354 LHYNI 358 (466)
Q Consensus 354 h~~~~ 358 (466)
|.|..
T Consensus 243 H~H~~ 247 (517)
T COG0737 243 HSHTV 247 (517)
T ss_pred CCccc
Confidence 99864
|
|
| >cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.012 Score=58.10 Aligned_cols=183 Identities=13% Similarity=0.138 Sum_probs=90.9
Q ss_pred CCeEEEEEccCCCCCC----------c----HHHHHHHHH----hCCC-EEEEcccccccccccccccchhHHHHHHHHH
Q 012311 158 ASYKFGIIGDLGQTYN----------S----LSTLEHYME----SGAQ-TVLFLGDLSYADRYQFIDVGVRWDSWGRFVE 218 (466)
Q Consensus 158 ~~~~f~v~GD~g~~~~----------~----~~tl~~~~~----~~~d-fvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~ 218 (466)
.+++|+..+|+|.... . ...++++.+ .+++ ++|..||.+......... ...+. .+-
T Consensus 4 ~~ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~-~~~g~----~~~ 78 (282)
T cd07407 4 GDINFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDAS-PPPGS----YSN 78 (282)
T ss_pred ceEEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeee-cCCCh----HHH
Confidence 4789999999986421 1 111233322 2455 678899999643221100 11222 233
Q ss_pred HHhhcCCe-EEcCCCceeeccCcCCcccccccccccccCCC--------CCCC---CCCCceEEEeeC-CEE--EEEEcC
Q 012311 219 RSAAYQPW-IWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPH--------LASK---SSSPLWYAIRRA-SAH--IIVLSS 283 (466)
Q Consensus 219 ~l~~~~P~-~~~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~--------~~~~---~~~~~yYsf~~g-~v~--fI~Lds 283 (466)
.++..+++ .+++||||++..+. + ...+..+......|. .+++ .....|.-++.+ +++ ||.|-+
T Consensus 79 ~~mN~mgyDa~tlGNHEFd~g~~-~-l~~l~~~~~~~~fp~l~aNi~~~~~~~~~~~~~~~y~i~~~~~G~kIgiiGltt 156 (282)
T cd07407 79 PIFRMMPYDLLTIGNHELYNYEV-A-DDEYEGFVPSWGDRYLTSNVDITDDSGLLVPIGSRYRKFTTKHGLRVLAFGFLF 156 (282)
T ss_pred HHHHhcCCcEEeecccccCcccc-H-HHHHHHHHhhcCCCEEEEEEEEeCCCCcccccccceEEEEcCCCcEEEEEEEec
Confidence 33444555 68999999964211 0 000000111011111 0000 012346666776 654 555543
Q ss_pred CCC--C-C----C--ChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHHc-CCc-EEEe
Q 012311 284 YSP--F-V----K--YTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRY-KVD-YRIS 352 (466)
Q Consensus 284 ~~~--~-~----~--~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y-~Vd-~~~~ 352 (466)
... . + . ...|.+|+.+.|++ .+..-+||+.|...-... + ..+..+.+.++. ++| ..+.
T Consensus 157 ~~~~~~~~~~f~d~~~~~~~~~v~~~l~~---~~~DvIIvlsH~G~~~d~-----~---~~~~~~~la~~~~~id~~Ii~ 225 (282)
T cd07407 157 DFKGAANGVTVQPVADVVQEPWFQDAINN---EDVDLILVLGHMPVRDDA-----E---FKVLHDAIRKIFPDTPIQFLG 225 (282)
T ss_pred ccccCCCCcEEcCHHHHHHHHHHHHHHHh---cCCCEEEEEeCCCCCCCc-----c---HHHHHHHHHHhCCCCCEEEEe
Confidence 211 1 1 1 12344588888875 467889999998764321 1 111112233344 678 6999
Q ss_pred ccccee
Q 012311 353 NLHYNI 358 (466)
Q Consensus 353 gh~~~~ 358 (466)
||.|..
T Consensus 226 GHsH~~ 231 (282)
T cd07407 226 GHSHVR 231 (282)
T ss_pred CCcccc
Confidence 999854
|
YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at |
| >cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.00035 Score=63.81 Aligned_cols=49 Identities=22% Similarity=0.225 Sum_probs=32.1
Q ss_pred hCCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCceee
Q 012311 184 SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIE 236 (466)
Q Consensus 184 ~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~~ 236 (466)
.+||.++++||++....... ...+.... ........+|+++++||||..
T Consensus 40 ~~~d~lii~GDl~~~~~~~~---~~~~~~~~-~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 40 YGPERLIILGDLKHSFGGLS---RQEFEEVA-FLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred cCCCEEEEeCcccccccccC---HHHHHHHH-HHHhccCCCeEEEEcccCccc
Confidence 49999999999996433211 11222221 333344678999999999975
|
This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro |
| >cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0043 Score=61.35 Aligned_cols=80 Identities=14% Similarity=0.044 Sum_probs=46.2
Q ss_pred CceEEEeeCCEE--EEEEcCCCC-------CC-CChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCcccccCHHHH
Q 012311 266 PLWYAIRRASAH--IIVLSSYSP-------FV-KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMR 335 (466)
Q Consensus 266 ~~yYsf~~g~v~--fI~Lds~~~-------~~-~~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~~~~~~r 335 (466)
..|.-++.++++ ||.+-+... .+ ...+-.+.+++.+++....+..-+|++.|...-. . +
T Consensus 130 ~p~~i~~~~G~kIgviG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~~~~D~II~l~H~G~~~--------d---~ 198 (281)
T cd07409 130 KPSTILTVGGEKIGIIGYTTPDTTELSSPGGKVKFLDEIEAAQKEADKLKAQGVNKIIALSHSGYEV--------D---K 198 (281)
T ss_pred CCeEEEEECCEEEEEEEEecCcccccccCCCceEECCHHHHHHHHHHHHHhcCCCEEEEEeccCchh--------H---H
Confidence 346667888854 555544211 01 1123345566666665434688899999976421 0 1
Q ss_pred HHHHHHHHHcCCcEEEecccceec
Q 012311 336 AAFESWFVRYKVDYRISNLHYNIS 359 (466)
Q Consensus 336 ~~l~~ll~~y~Vd~~~~gh~~~~~ 359 (466)
.+..-+ -+||++++||.|...
T Consensus 199 -~la~~~--~giD~IiggH~H~~~ 219 (281)
T cd07409 199 -EIARKV--PGVDVIVGGHSHTFL 219 (281)
T ss_pred -HHHHcC--CCCcEEEeCCcCccc
Confidence 222222 589999999998654
|
CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si |
| >cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0059 Score=60.51 Aligned_cols=51 Identities=16% Similarity=0.135 Sum_probs=30.0
Q ss_pred CCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccceec
Q 012311 307 EKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYNIS 359 (466)
Q Consensus 307 ~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~~ 359 (466)
.+..-+|++.|........ +. ........+...+...+||+++.||.|...
T Consensus 172 ~~~D~VI~lsH~G~~~~~~-~~-~~~~~~~~lA~~~~~~giD~IigGHsH~~~ 222 (285)
T cd07405 172 EKPDIVIAATHMGHYDNGE-HG-SNAPGDVEMARALPAGGLDLIVGGHSQDPV 222 (285)
T ss_pred cCCCEEEEEecccccCCcc-cc-ccCchHHHHHHhcCCCCCCEEEeCCCCccc
Confidence 4678899999998754221 11 110111222233323599999999998654
|
UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs |
| >TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0022 Score=61.24 Aligned_cols=69 Identities=23% Similarity=0.436 Sum_probs=45.7
Q ss_pred eEEEEEccCCCCCCc--------------HHHHHHHHH----hCCCEEEEcccccccccccccccchhHHHHHHHHHHHh
Q 012311 160 YKFGIIGDLGQTYNS--------------LSTLEHYME----SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSA 221 (466)
Q Consensus 160 ~~f~v~GD~g~~~~~--------------~~tl~~~~~----~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~ 221 (466)
-+.++++|+|.+... ..+++++.+ .+||.++++||+...... ...|..+.++++.+
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~-----~~~~~~~~~~l~~~- 88 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKK-----GLEWRFIREFIEVT- 88 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCC-----hHHHHHHHHHHHhc-
Confidence 468899999987521 133444432 389999999999964332 13344444555543
Q ss_pred hcCCeEEcCCCcee
Q 012311 222 AYQPWIWSAGNHEI 235 (466)
Q Consensus 222 ~~~P~~~~~GNHE~ 235 (466)
..++++++||||.
T Consensus 89 -~~~v~~V~GNHD~ 101 (225)
T TIGR00024 89 -FRDLILIRGNHDA 101 (225)
T ss_pred -CCcEEEECCCCCC
Confidence 3599999999995
|
Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal. |
| >PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.018 Score=62.44 Aligned_cols=189 Identities=13% Similarity=0.068 Sum_probs=87.5
Q ss_pred CCCeEEEEEccCCCCCC-------cHHHH----HHHHHh----CC-CEEEEcccccccccccccccchhHHHHHHHHHHH
Q 012311 157 DASYKFGIIGDLGQTYN-------SLSTL----EHYMES----GA-QTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERS 220 (466)
Q Consensus 157 ~~~~~f~v~GD~g~~~~-------~~~tl----~~~~~~----~~-dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l 220 (466)
...++|+.++|+|.... ....+ +++.+. ++ -++|.+||..... ... .+.. .+.+-.+
T Consensus 32 ~~~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs--~~s----~~~~-g~~~i~~ 104 (551)
T PRK09558 32 TYKITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGV--PES----DLQD-AEPDFRG 104 (551)
T ss_pred ceEEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccce--Ehh----hhcC-CchhHHH
Confidence 45899999999987532 22222 233221 23 4688999998532 111 1100 0111122
Q ss_pred hhcCC-eEEcCCCceeeccCcC-C---cccccccccccccCCCCCCCCCCCceEEEeeCCEE--EEEEcCCCC--C----
Q 012311 221 AAYQP-WIWSAGNHEIEYMTYM-G---EVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAH--IIVLSSYSP--F---- 287 (466)
Q Consensus 221 ~~~~P-~~~~~GNHE~~~~~~~-~---~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~--fI~Lds~~~--~---- 287 (466)
+..+. =..++||||+++.... . ....|.-..+-......+. ..-..|.-++.++++ ||.+-+... +
T Consensus 105 mN~~g~Da~tlGNHEFD~G~~~L~~~~~~a~fp~l~aNv~~~~~g~-~~~~py~i~~~~G~kIgiiG~~t~~~~~~~~~~ 183 (551)
T PRK09558 105 MNLIGYDAMAVGNHEFDNPLSVLRKQEKWAKFPFLSANIYQKSTGE-RLFKPYAIFDRQGLKIAVIGLTTEDTAKIGNPE 183 (551)
T ss_pred HhcCCCCEEcccccccCcCHHHHHHhhccCCCCEEEEEEEECCCCC-cccCCeEEEEECCEEEEEEEEeccccccccCCC
Confidence 22222 2567899999864210 0 0001110001000010010 112346667888855 555543211 0
Q ss_pred ---C-CChHHHHHHHHHHhhccC-CCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHHc---CCcEEEeccccee
Q 012311 288 ---V-KYTPQWEWLREELKKVDR-EKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRY---KVDYRISNLHYNI 358 (466)
Q Consensus 288 ---~-~~~~Q~~WL~~~L~~~~r-~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y---~Vd~~~~gh~~~~ 358 (466)
+ ......+-+++..++... .+..-+|++.|......... ....... ..|.++. +||+++.||.|..
T Consensus 184 ~~~~~~f~d~~e~a~~~v~~Lk~~~~~D~IV~LsH~G~~~~~~~-~~~~~~d----~~la~~~~~~~IDvIlgGHsH~~ 257 (551)
T PRK09558 184 YFTDIEFRDPAEEAKKVIPELKQTEKPDVIIALTHMGHYDDGEH-GSNAPGD----VEMARSLPAGGLDMIVGGHSQDP 257 (551)
T ss_pred CcCCceECCHHHHHHHHHHHHHhccCCCEEEEEeccccccCCcc-CCCCccH----HHHHHhCCccCceEEEeCCCCcc
Confidence 0 011122223333333321 46888999999887542211 0000101 2233433 8999999999864
|
|
| >PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes [] | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0069 Score=47.40 Aligned_cols=70 Identities=20% Similarity=0.386 Sum_probs=46.0
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCCC----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~~----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y 133 (466)
+|+.+++.... .+++.|+|..+.... .-.|+|....+... ..... ...-.+.++|+||+|+|+|
T Consensus 2 ~P~~l~v~~~~--~~sv~v~W~~~~~~~~~~~~y~v~~~~~~~~~~------~~~~~----~~~~~~~~~i~~L~p~t~Y 69 (85)
T PF00041_consen 2 APENLSVSNIS--PTSVTVSWKPPSSGNGPITGYRVEYRSVNSTSD------WQEVT----VPGNETSYTITGLQPGTTY 69 (85)
T ss_dssp SSEEEEEEEEC--SSEEEEEEEESSSTSSSESEEEEEEEETTSSSE------EEEEE----EETTSSEEEEESCCTTSEE
T ss_pred cCcCeEEEECC--CCEEEEEEECCCCCCCCeeEEEEEEEeccccee------eeeee----eeeeeeeeeeccCCCCCEE
Confidence 48888888753 589999999984221 24677766654330 11111 1112237889999999999
Q ss_pred EEEecc
Q 012311 134 YYKIGS 139 (466)
Q Consensus 134 ~Yrv~~ 139 (466)
.+||..
T Consensus 70 ~~~v~a 75 (85)
T PF00041_consen 70 EFRVRA 75 (85)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999975
|
They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A .... |
| >COG2908 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0047 Score=58.59 Aligned_cols=185 Identities=18% Similarity=0.194 Sum_probs=92.5
Q ss_pred EEccCCCCCCcHH---HHHHHHHh---CCCEEEEcccccccccccccccchhHHHHHH----HHHHHh-hcCCeEEcCCC
Q 012311 164 IIGDLGQTYNSLS---TLEHYMES---GAQTVLFLGDLSYADRYQFIDVGVRWDSWGR----FVERSA-AYQPWIWSAGN 232 (466)
Q Consensus 164 v~GD~g~~~~~~~---tl~~~~~~---~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~----~~~~l~-~~~P~~~~~GN 232 (466)
.++|.|.+..... .+...++. +.|.+.++||++. ++.. +..|.+..+ .+..++ ...|++.++||
T Consensus 2 FISDlHL~~~~p~~t~~fl~Fl~~~a~~ad~lyilGDifd--~w~g---~~~~~~~~~~V~~~l~~~a~~G~~v~~i~GN 76 (237)
T COG2908 2 FISDLHLGPKRPALTAFFLDFLREEAAQADALYILGDIFD--GWIG---DDEPPQLHRQVAQKLLRLARKGTRVYYIHGN 76 (237)
T ss_pred eeeccccCCCCcHHHHHHHHHHHhccccCcEEEEechhhh--hhhc---CCcccHHHHHHHHHHHHHHhcCCeEEEecCc
Confidence 5899998854322 23333333 4599999999994 4432 223444432 233333 45999999999
Q ss_pred ceeeccCcCCccccccccccccc-CCCCCCCCCCCceEEEeeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCCCe
Q 012311 233 HEIEYMTYMGEVVPFKSYLHRYP-TPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPW 311 (466)
Q Consensus 233 HE~~~~~~~~~~~~f~~y~~rf~-~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~~~~~~~Q~~WL~~~L~~~~r~~~~w 311 (466)
||.--. ..|...+. +- ..+.+=-+++-+-.++++-.- .+-....++.|+...... +|
T Consensus 77 ~Dfll~---------~~f~~~~g~~~------l~~~~~~~~l~g~~~Ll~HGD-~f~t~~~~y~~~r~~~~~------~~ 134 (237)
T COG2908 77 HDFLLG---------KRFAQEAGGMT------LLPDPIVLDLYGKRILLAHGD-TFCTDDRAYQWFRYKVHW------AW 134 (237)
T ss_pred hHHHHH---------HHHHhhcCceE------EcCcceeeeecCcEEEEEeCC-cccchHHHHHHHHHHccc------HH
Confidence 996421 11111111 00 011222233333445544331 122234455555443221 11
Q ss_pred EE-EEeccc----------cccCCCc--c-cccC----HHHHHHHHHHHHHcCCcEEEecccceecCCcccccCCCCCcE
Q 012311 312 LI-VLMHVP----------IYNSNEA--H-FMEG----ESMRAAFESWFVRYKVDYRISNLHYNISSGDCFPVPDKSAPV 373 (466)
Q Consensus 312 ~I-V~~H~P----------~y~s~~~--h-~~~~----~~~r~~l~~ll~~y~Vd~~~~gh~~~~~~~~~~~~~~~~g~v 373 (466)
.. .+.+.| +.+-..+ + .... ..+.+.....+.+++||.+++||.|.-. ..+..++.
T Consensus 135 ~~~lflnl~l~~R~ri~~k~r~~s~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~a------i~~i~~~~ 208 (237)
T COG2908 135 LQLLFLNLPLRVRRRIAYKIRSLSSWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPA------IHNIPGIT 208 (237)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHhhHHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHh------hccCCCce
Confidence 11 111222 1111110 0 0011 1234566778999999999999987421 12344689
Q ss_pred EEEeCCCC
Q 012311 374 YITVGDGG 381 (466)
Q Consensus 374 yiv~G~gG 381 (466)
||+.|+--
T Consensus 209 yi~lGdW~ 216 (237)
T COG2908 209 YINLGDWV 216 (237)
T ss_pred EEecCcch
Confidence 99999876
|
|
| >PHA02239 putative protein phosphatase | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.003 Score=60.72 Aligned_cols=69 Identities=19% Similarity=0.255 Sum_probs=40.5
Q ss_pred EEEEEccCCCCCCcH-HHHHHHHHh--CCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCceee
Q 012311 161 KFGIIGDLGQTYNSL-STLEHYMES--GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIE 236 (466)
Q Consensus 161 ~f~v~GD~g~~~~~~-~tl~~~~~~--~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~~ 236 (466)
+++++||.|...... ..++.+.+. ..|.++++||++... . .. -......++.+....+++.++||||..
T Consensus 2 ~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG-~-----~s-~~v~~~l~~~~~~~~~~~~l~GNHE~~ 73 (235)
T PHA02239 2 AIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRG-K-----RS-KDVVNYIFDLMSNDDNVVTLLGNHDDE 73 (235)
T ss_pred eEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCC-C-----Ch-HHHHHHHHHHhhcCCCeEEEECCcHHH
Confidence 689999999643222 223333322 259999999999532 1 11 122222233223345789999999964
|
|
| >COG0622 Predicted phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.036 Score=50.64 Aligned_cols=87 Identities=16% Similarity=0.106 Sum_probs=55.6
Q ss_pred eEEEEEccCCCCCCc-HHHHHHHHHhCCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCceeecc
Q 012311 160 YKFGIIGDLGQTYNS-LSTLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYM 238 (466)
Q Consensus 160 ~~f~v~GD~g~~~~~-~~tl~~~~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~~~~ 238 (466)
.++++++|+|..... ....+.....++|+|+|+||.+..... +.+... -..+++++.||.|.+..
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~~---------~~l~~~-----~~~~i~~V~GN~D~~~~ 67 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFTL---------DALEGG-----LAAKLIAVRGNCDGEVD 67 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccch---------HHhhcc-----cccceEEEEccCCCccc
Confidence 489999999987642 222233334499999999999964221 111111 24689999999997521
Q ss_pred CcCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcC
Q 012311 239 TYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSS 283 (466)
Q Consensus 239 ~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds 283 (466)
. . ..| .--.+..++++|+++-.
T Consensus 68 ~------------~--~~p---------~~~~~~~~g~ki~l~HG 89 (172)
T COG0622 68 Q------------E--ELP---------EELVLEVGGVKIFLTHG 89 (172)
T ss_pred c------------c--cCC---------hhHeEEECCEEEEEECC
Confidence 0 0 011 22457888899988876
|
|
| >PRK04036 DNA polymerase II small subunit; Validated | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.009 Score=63.95 Aligned_cols=80 Identities=16% Similarity=0.161 Sum_probs=50.9
Q ss_pred CCCeEEEEEccCCCCCCc--HHHH----HHHH---------HhCCCEEEEcccccccccc-ccc-------ccchhHHHH
Q 012311 157 DASYKFGIIGDLGQTYNS--LSTL----EHYM---------ESGAQTVLFLGDLSYADRY-QFI-------DVGVRWDSW 213 (466)
Q Consensus 157 ~~~~~f~v~GD~g~~~~~--~~tl----~~~~---------~~~~dfvl~~GDl~Y~~~~-~~~-------d~~~~wd~~ 213 (466)
..+.++++++|+|.+... ...+ +.+. +.+++.++++||++...+. ... +...+.+.+
T Consensus 241 ~~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l 320 (504)
T PRK04036 241 DEKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAA 320 (504)
T ss_pred CCccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHH
Confidence 357899999999976532 1112 2223 3478999999999953221 100 001122345
Q ss_pred HHHHHHHhhcCCeEEcCCCceee
Q 012311 214 GRFVERSAAYQPWIWSAGNHEIE 236 (466)
Q Consensus 214 ~~~~~~l~~~~P~~~~~GNHE~~ 236 (466)
.++++.+...+|++.++||||..
T Consensus 321 ~~~L~~L~~~i~V~~ipGNHD~~ 343 (504)
T PRK04036 321 AEYLKQIPEDIKIIISPGNHDAV 343 (504)
T ss_pred HHHHHhhhcCCeEEEecCCCcch
Confidence 55666666788999999999974
|
|
| >cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.0041 Score=58.54 Aligned_cols=61 Identities=21% Similarity=0.224 Sum_probs=39.0
Q ss_pred EEEEEccCCCCCCcHHHHHHHHH-----hCCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCcee
Q 012311 161 KFGIIGDLGQTYNSLSTLEHYME-----SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEI 235 (466)
Q Consensus 161 ~f~v~GD~g~~~~~~~tl~~~~~-----~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~ 235 (466)
|++++||.|... ..+..+.+ .++|.++++||++..... . . +.++.+.. .+++.+.||||.
T Consensus 2 ri~~isDiHg~~---~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~------~--~---~~~~~l~~-~~~~~v~GNhe~ 66 (207)
T cd07424 2 RDFVVGDIHGHY---SLLQKALDAVGFDPARDRLISVGDLIDRGPE------S--L---ACLELLLE-PWFHAVRGNHEQ 66 (207)
T ss_pred CEEEEECCCCCH---HHHHHHHHHcCCCCCCCEEEEeCCcccCCCC------H--H---HHHHHHhc-CCEEEeECCChH
Confidence 689999999643 33443332 158999999999953221 1 1 22332222 468899999996
Q ss_pred e
Q 012311 236 E 236 (466)
Q Consensus 236 ~ 236 (466)
.
T Consensus 67 ~ 67 (207)
T cd07424 67 M 67 (207)
T ss_pred H
Confidence 4
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all |
| >cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.0058 Score=58.70 Aligned_cols=68 Identities=28% Similarity=0.371 Sum_probs=40.6
Q ss_pred EEEEEccCCCCCCcHHH-HHHHH---Hh-------CCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEc
Q 012311 161 KFGIIGDLGQTYNSLST-LEHYM---ES-------GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWS 229 (466)
Q Consensus 161 ~f~v~GD~g~~~~~~~t-l~~~~---~~-------~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~ 229 (466)
+++++||.|........ ++.+. +. +.|.++++||++... .. -.+-.+.+..+...-.+..+
T Consensus 2 ~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG-~~-------s~evl~~l~~l~~~~~~~~v 73 (234)
T cd07423 2 PFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRG-PD-------SPEVLRLVMSMVAAGAALCV 73 (234)
T ss_pred CeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCC-CC-------HHHHHHHHHHHhhCCcEEEE
Confidence 68999999985543322 22221 00 258999999999532 11 12233444444333467899
Q ss_pred CCCceee
Q 012311 230 AGNHEIE 236 (466)
Q Consensus 230 ~GNHE~~ 236 (466)
.||||..
T Consensus 74 ~GNHE~~ 80 (234)
T cd07423 74 PGNHDNK 80 (234)
T ss_pred ECCcHHH
Confidence 9999964
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp |
| >PRK00166 apaH diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.0067 Score=59.74 Aligned_cols=66 Identities=26% Similarity=0.313 Sum_probs=40.3
Q ss_pred EEEEEccCCCCCCcHH-HHHHHH-HhCCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCceee
Q 012311 161 KFGIIGDLGQTYNSLS-TLEHYM-ESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIE 236 (466)
Q Consensus 161 ~f~v~GD~g~~~~~~~-tl~~~~-~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~~ 236 (466)
+++++||.|....... .++.+. +.+.|.++++||++..... . .+..+.+..+ ..++.++.||||..
T Consensus 2 ~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~------s--~~vl~~l~~l--~~~~~~VlGNHD~~ 69 (275)
T PRK00166 2 ATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPD------S--LEVLRFVKSL--GDSAVTVLGNHDLH 69 (275)
T ss_pred cEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcC------H--HHHHHHHHhc--CCCeEEEecChhHH
Confidence 5789999997554332 222221 1257999999999953211 1 2223333332 34688999999974
|
|
| >PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.012 Score=57.09 Aligned_cols=65 Identities=23% Similarity=0.309 Sum_probs=39.8
Q ss_pred EEEEEccCCCCCCcHHHHHHHHHh-------------CCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeE
Q 012311 161 KFGIIGDLGQTYNSLSTLEHYMES-------------GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWI 227 (466)
Q Consensus 161 ~f~v~GD~g~~~~~~~tl~~~~~~-------------~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~ 227 (466)
|++|+||.|... ..+.++.+. +-|.++++||++.. |..+ .+-.+.+..+...-.++
T Consensus 2 ~~~vIGDIHG~~---~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDR-Gp~S-------~~vl~~~~~~~~~~~~~ 70 (245)
T PRK13625 2 KYDIIGDIHGCY---QEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDR-GPHS-------LRMIEIVWELVEKKAAY 70 (245)
T ss_pred ceEEEEECccCH---HHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCC-CcCh-------HHHHHHHHHHhhCCCEE
Confidence 689999999744 334443332 23689999999953 2211 12223333333345789
Q ss_pred EcCCCceee
Q 012311 228 WSAGNHEIE 236 (466)
Q Consensus 228 ~~~GNHE~~ 236 (466)
++.||||..
T Consensus 71 ~l~GNHE~~ 79 (245)
T PRK13625 71 YVPGNHCNK 79 (245)
T ss_pred EEeCccHHH
Confidence 999999953
|
|
| >TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.1 Score=56.53 Aligned_cols=76 Identities=17% Similarity=0.055 Sum_probs=42.8
Q ss_pred CceEEEeeCC--EEEEEEcCCCC-C-----CC-----C--hHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCccccc
Q 012311 266 PLWYAIRRAS--AHIIVLSSYSP-F-----VK-----Y--TPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFME 330 (466)
Q Consensus 266 ~~yYsf~~g~--v~fI~Lds~~~-~-----~~-----~--~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~~ 330 (466)
..|.-++.++ |-||.|.+... . +. . ..-.+|. ++|++ .+..-+|++.|.....
T Consensus 129 ~p~~i~~~~g~kIgiiGl~~~~~~~~~~~~~~~~~f~d~~~~~~~~v-~~Lk~---~g~D~II~lsH~g~~~-------- 196 (550)
T TIGR01530 129 KPSAIFERAGEKIAIIGLDTVKKTVESSSPGKDIKFIDEIAAAQIAA-NALKQ---QGINKIILLSHAGFEK-------- 196 (550)
T ss_pred CceEEEEECCeEEEEEEeecCcccccccCCCCceEECCHHHHHHHHH-HHHHh---CCCCEEEEEecCCcHH--------
Confidence 3566678887 56777754211 0 00 0 1111222 33544 4678899999975311
Q ss_pred CHHHHHHHHHHHHH-cCCcEEEecccceecC
Q 012311 331 GESMRAAFESWFVR-YKVDYRISNLHYNISS 360 (466)
Q Consensus 331 ~~~~r~~l~~ll~~-y~Vd~~~~gh~~~~~~ 360 (466)
.. .|.++ -+||+++.||.|.+..
T Consensus 197 d~-------~la~~~~~iD~IigGHsH~~~~ 220 (550)
T TIGR01530 197 NC-------EIAQKINDIDVIVSGDSHYLLG 220 (550)
T ss_pred HH-------HHHhcCCCCCEEEeCCCCcccc
Confidence 11 12222 2899999999997654
|
This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc. |
| >cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.011 Score=56.98 Aligned_cols=74 Identities=15% Similarity=0.183 Sum_probs=45.0
Q ss_pred EEEccCCCCCCc--HHHHHHHH----Hh-----CCCEEEEccccccccccccc--------ccchhHHHHHHHHHHHhhc
Q 012311 163 GIIGDLGQTYNS--LSTLEHYM----ES-----GAQTVLFLGDLSYADRYQFI--------DVGVRWDSWGRFVERSAAY 223 (466)
Q Consensus 163 ~v~GD~g~~~~~--~~tl~~~~----~~-----~~dfvl~~GDl~Y~~~~~~~--------d~~~~wd~~~~~~~~l~~~ 223 (466)
++++|+|.+... ...++.+. .. ++|.++++||++........ +....+..+.+.++.+.+.
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~ 81 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPSH 81 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcccC
Confidence 578999975432 22222222 22 46999999999954211000 0012244455666777778
Q ss_pred CCeEEcCCCceee
Q 012311 224 QPWIWSAGNHEIE 236 (466)
Q Consensus 224 ~P~~~~~GNHE~~ 236 (466)
+|+++++||||..
T Consensus 82 ~~v~~ipGNHD~~ 94 (243)
T cd07386 82 IKIIIIPGNHDAV 94 (243)
T ss_pred CeEEEeCCCCCcc
Confidence 9999999999974
|
The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera |
| >cd08162 MPP_PhoA_N Synechococcus sp | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.082 Score=53.13 Aligned_cols=39 Identities=15% Similarity=0.097 Sum_probs=25.9
Q ss_pred CCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHHc-CCcEEEecccceec
Q 012311 307 EKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRY-KVDYRISNLHYNIS 359 (466)
Q Consensus 307 ~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y-~Vd~~~~gh~~~~~ 359 (466)
.+..-+|++.|.--+. +.. .|..+. +||+++.||.|...
T Consensus 206 ~gvD~II~LsH~g~~~-------~d~-------~lA~~v~gIDvIigGHsH~~l 245 (313)
T cd08162 206 QGINKIILLSHLQQIS-------IEQ-------ALAALLSGVDVIIAGGSNTLL 245 (313)
T ss_pred CCCCEEEEEecccccc-------hHH-------HHHhcCCCCCEEEeCCCCccC
Confidence 4678899999973111 111 234443 89999999999754
|
strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat |
| >cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.0067 Score=59.29 Aligned_cols=176 Identities=16% Similarity=0.091 Sum_probs=91.5
Q ss_pred EEEEccCCCCCCcH-HHHHHHHHh---CCCEEEEcccccccccccccc-c-----chhHHHHHHHHHHHh-hcCCeEEcC
Q 012311 162 FGIIGDLGQTYNSL-STLEHYMES---GAQTVLFLGDLSYADRYQFID-V-----GVRWDSWGRFVERSA-AYQPWIWSA 230 (466)
Q Consensus 162 f~v~GD~g~~~~~~-~tl~~~~~~---~~dfvl~~GDl~Y~~~~~~~d-~-----~~~wd~~~~~~~~l~-~~~P~~~~~ 230 (466)
|+|.||.+...... ..++.+.+. ++|++|.+||+.-.......+ + ...+..|.+.++... ..+|++.+.
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~ 80 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIG 80 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEEC
Confidence 57899998754322 223444332 699999999996321111000 0 012334444433322 466779999
Q ss_pred CCceeeccCcCCcccccccccccccCCCCCCCCCCCce-----EEEeeCCEEEEEEcCCC---CCC-------C-ChHHH
Q 012311 231 GNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLW-----YAIRRASAHIIVLSSYS---PFV-------K-YTPQW 294 (466)
Q Consensus 231 GNHE~~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~y-----Ysf~~g~v~fI~Lds~~---~~~-------~-~~~Q~ 294 (466)
||||.... +.. +|..+ ....+.+ ..|++++++|..|.... ++. . ...++
T Consensus 81 GNHE~~~~-----------l~~---l~~gg-~v~~Ni~~Lg~~~v~~~~GlrIaGLsG~~~~~~~~~~~~~~~~~t~~~~ 145 (262)
T cd00844 81 GNHEASNY-----------LWE---LPYGG-WVAPNIYYLGYAGVVNFGGLRIAGLSGIYKSHDYRKGHFERPPYSEDTK 145 (262)
T ss_pred CCCCCHHH-----------HHh---hcCCC-eecCcEEEecCCCEEEECCeEEEEecccccccccccccccCCCCCHHHH
Confidence 99995311 100 11100 0011233 24667899999988622 111 1 12333
Q ss_pred HHHH-------HHHhhccCCCCCeEEEEeccccccCCCcccccCH-----------------HHHHHHHHHHHHcCCcEE
Q 012311 295 EWLR-------EELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGE-----------------SMRAAFESWFVRYKVDYR 350 (466)
Q Consensus 295 ~WL~-------~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~~~~-----------------~~r~~l~~ll~~y~Vd~~ 350 (466)
..+. ..|... ..+-=|++.|.|+...... .+.. .--..+..|+++.+=.+.
T Consensus 146 rs~y~~r~~~~~kl~~~---~~~vDIlLSHdWP~gI~~~--~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ll~~lkPryh 220 (262)
T cd00844 146 RSAYHVRNIEVFKLKQL---KQPIDIFLSHDWPRGIYKH--GDKKQLLRKKPFFRQDIESGTLGSPAAEELLKHLKPRYW 220 (262)
T ss_pred HHhhhhhHHHHHHHHhc---CCCCcEEEeCCCCcchhhc--cchHHhhhcCccchhcccccCCCCHHHHHHHHHhCCCEE
Confidence 3211 112221 1123599999999875432 1100 012356678999999999
Q ss_pred Eecccce
Q 012311 351 ISNLHYN 357 (466)
Q Consensus 351 ~~gh~~~ 357 (466)
++||.|.
T Consensus 221 f~gH~H~ 227 (262)
T cd00844 221 FSAHLHV 227 (262)
T ss_pred EEecCCc
Confidence 9999764
|
Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s |
| >cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.017 Score=52.49 Aligned_cols=41 Identities=24% Similarity=0.253 Sum_probs=27.6
Q ss_pred CCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCceee
Q 012311 185 GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIE 236 (466)
Q Consensus 185 ~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~~ 236 (466)
++|.|+++||++..... .. +.+.++.+ ..|++.++||||..
T Consensus 42 ~~d~vi~~GDl~~~~~~------~~---~~~~l~~~--~~~~~~v~GNHD~~ 82 (168)
T cd07390 42 PDDTVYHLGDFSFGGKA------GT---ELELLSRL--NGRKHLIKGNHDSS 82 (168)
T ss_pred CCCEEEEeCCCCCCCCh------HH---HHHHHHhC--CCCeEEEeCCCCch
Confidence 68999999999964221 11 12333332 36899999999964
|
This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d |
| >COG1407 Predicted ICC-like phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.019 Score=54.64 Aligned_cols=73 Identities=22% Similarity=0.278 Sum_probs=48.5
Q ss_pred eEEEEEccCCCCCCcH-----------------HHHHHHHHh-CCCEEEEcccccccccccccccchhHHHHHHHHHHHh
Q 012311 160 YKFGIIGDLGQTYNSL-----------------STLEHYMES-GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSA 221 (466)
Q Consensus 160 ~~f~v~GD~g~~~~~~-----------------~tl~~~~~~-~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~ 221 (466)
-+.+|++|+|.+.... ..+.++.+. +|+-++.+||+-.+-+... ...|+....+++.+.
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~---~~e~~~~~~f~~~~~ 96 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSL---RQEKEEVREFLELLD 96 (235)
T ss_pred CcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccc---cccHHHHHHHHHHhc
Confidence 3689999999876311 123333333 9999999999997654321 344555555555444
Q ss_pred hcCCeEEcCCCceee
Q 012311 222 AYQPWIWSAGNHEIE 236 (466)
Q Consensus 222 ~~~P~~~~~GNHE~~ 236 (466)
.. -|+++.||||..
T Consensus 97 ~~-evi~i~GNHD~~ 110 (235)
T COG1407 97 ER-EVIIIRGNHDNG 110 (235)
T ss_pred cC-cEEEEeccCCCc
Confidence 33 599999999965
|
|
| >PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.24 Score=55.77 Aligned_cols=58 Identities=14% Similarity=-0.003 Sum_probs=32.6
Q ss_pred HHHHHhhccCCCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccceec
Q 012311 297 LREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYNIS 359 (466)
Q Consensus 297 L~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~~ 359 (466)
+++...+.....+.-+|++.|.-+-........++. . ..|-.--|||.++.||.|...
T Consensus 298 a~~~v~~Lr~~GaDvIIaLsH~G~~~d~~~~~~En~--~---~~LA~v~GIDaIvgGHsH~~~ 355 (814)
T PRK11907 298 VRDIIPTMRAAGADIVLVLSHSGIGDDQYEVGEENV--G---YQIASLSGVDAVVTGHSHAEF 355 (814)
T ss_pred HHHHHHHHHhcCCCEEEEEeCCCcccccccccccch--h---hHHhcCCCCCEEEECCCCCcc
Confidence 444433333256888999999886432111111111 1 123233589999999998753
|
|
| >PRK09968 serine/threonine-specific protein phosphatase 2; Provisional | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.012 Score=55.88 Aligned_cols=64 Identities=19% Similarity=0.205 Sum_probs=38.6
Q ss_pred EEEEEccCCCCCCcHHH-HHHHH-HhCCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCceee
Q 012311 161 KFGIIGDLGQTYNSLST-LEHYM-ESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIE 236 (466)
Q Consensus 161 ~f~v~GD~g~~~~~~~t-l~~~~-~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~~ 236 (466)
|++++||.|........ ++.+. ..+.|.++++||++.....+ . +.++.+. ...+..+.||||..
T Consensus 16 ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~--------~---~~l~~l~-~~~~~~v~GNHE~~ 81 (218)
T PRK09968 16 HIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPES--------L---NVLRLLN-QPWFISVKGNHEAM 81 (218)
T ss_pred eEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCH--------H---HHHHHHh-hCCcEEEECchHHH
Confidence 89999999875433222 22221 12679999999999532211 1 2222222 23478999999964
|
|
| >cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.019 Score=54.12 Aligned_cols=63 Identities=22% Similarity=0.241 Sum_probs=38.6
Q ss_pred EEEccCCCCCCcHHHHHHHHH------------hCCCEEEEcccccccccccccccchhHHHHHHHHHHH-----hhcCC
Q 012311 163 GIIGDLGQTYNSLSTLEHYME------------SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERS-----AAYQP 225 (466)
Q Consensus 163 ~v~GD~g~~~~~~~tl~~~~~------------~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l-----~~~~P 225 (466)
+++||+|.... .+.++.+ .+.|.++++||++..... . .+..+.+..+ ....+
T Consensus 1 ~vi~DIHG~~~---~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~------~--~~vl~~l~~l~~~~~~~~~~ 69 (208)
T cd07425 1 VAIGDLHGDLD---AFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPD------V--IEILWLLYKLEQEAAKAGGK 69 (208)
T ss_pred CEEeCccCCHH---HHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcC------H--HHHHHHHHHHHHHHHhcCCe
Confidence 37999987543 3333332 257899999999943211 1 1222333222 23468
Q ss_pred eEEcCCCceee
Q 012311 226 WIWSAGNHEIE 236 (466)
Q Consensus 226 ~~~~~GNHE~~ 236 (466)
++++.||||..
T Consensus 70 v~~l~GNHE~~ 80 (208)
T cd07425 70 VHFLLGNHELM 80 (208)
T ss_pred EEEeeCCCcHH
Confidence 99999999975
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal |
| >cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.022 Score=54.26 Aligned_cols=67 Identities=24% Similarity=0.288 Sum_probs=38.2
Q ss_pred EEEEccCCCCCCcHH-HHHHHHHh--------CCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCC
Q 012311 162 FGIIGDLGQTYNSLS-TLEHYMES--------GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGN 232 (466)
Q Consensus 162 f~v~GD~g~~~~~~~-tl~~~~~~--------~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GN 232 (466)
+.+|||.|....... .++++... ..|.++++||++... ..+ .+-.+.+..+...-.++.+.||
T Consensus 1 ~~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRG-p~S-------~~vl~~l~~l~~~~~~~~l~GN 72 (222)
T cd07413 1 YDFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRG-PEI-------RELLEIVKSMVDAGHALAVMGN 72 (222)
T ss_pred CEEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCC-CCH-------HHHHHHHHHhhcCCCEEEEEcc
Confidence 468999997543322 22222111 257899999999432 111 2223333333333368889999
Q ss_pred ceee
Q 012311 233 HEIE 236 (466)
Q Consensus 233 HE~~ 236 (466)
||..
T Consensus 73 HE~~ 76 (222)
T cd07413 73 HEFN 76 (222)
T ss_pred CcHH
Confidence 9964
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of |
| >cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.47 Score=46.19 Aligned_cols=138 Identities=12% Similarity=0.126 Sum_probs=75.7
Q ss_pred EEEEccCCCCCCcH--HHHHHHHH---------------hCCCEEEEccccccccccccc--------------ccchhH
Q 012311 162 FGIIGDLGQTYNSL--STLEHYME---------------SGAQTVLFLGDLSYADRYQFI--------------DVGVRW 210 (466)
Q Consensus 162 f~v~GD~g~~~~~~--~tl~~~~~---------------~~~dfvl~~GDl~Y~~~~~~~--------------d~~~~w 210 (466)
++.++|++.+.... ..++.+.+ .+..-+|.+||.+...+.... +.....
T Consensus 2 i~~vSgL~ig~~~~~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (257)
T cd07387 2 IALVSGLGLGGNAESSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAV 81 (257)
T ss_pred EEEEcccccCCCccchHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhccccccchhhHHHH
Confidence 67888888765432 12222211 133469999999975432110 112345
Q ss_pred HHHHHHHHHHhhcCCeEEcCCCceeeccCcCCcccccccccccccCCCC-CCCCCCCceEEEeeCCEEEEEEcCCC----
Q 012311 211 DSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHL-ASKSSSPLWYAIRRASAHIIVLSSYS---- 285 (466)
Q Consensus 211 d~~~~~~~~l~~~~P~~~~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~~-~~~~~~~~yYsf~~g~v~fI~Lds~~---- 285 (466)
+++..++..+.+.+|+.+.|||||-..... -+.++.. ..|..-.. .+-..-..-|.|++++++|++.....
T Consensus 82 ~~ld~~l~~l~~~i~V~imPG~~Dp~~~~l--PQqplh~--~lfp~s~~~~~~~~vtNP~~~~i~g~~vLgtsGqni~Di 157 (257)
T cd07387 82 KELDNFLSQLASSVPVDLMPGEFDPANHSL--PQQPLHR--CLFPKSSNYSTLNLVTNPYEFSIDGVRVLGTSGQNVDDI 157 (257)
T ss_pred HHHHHHHHhhhcCCeEEECCCCCCcccccC--CCCCCCH--HHhhcccccCCcEEeCCCeEEEECCEEEEEECCCCHHHH
Confidence 566777888888999999999999753210 1122210 11110000 00000112256999999999888753
Q ss_pred -CCCCChHHHHHHHHHHhh
Q 012311 286 -PFVKYTPQWEWLREELKK 303 (466)
Q Consensus 286 -~~~~~~~Q~~WL~~~L~~ 303 (466)
.|.....-.+.|+..|+.
T Consensus 158 ~ky~~~~~~l~~me~~L~w 176 (257)
T cd07387 158 LKYSSLESRLDILERTLKW 176 (257)
T ss_pred HHhCCCCCHHHHHHHHHHh
Confidence 122333446778887775
|
PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily |
| >PRK11439 pphA serine/threonine protein phosphatase 1; Provisional | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.024 Score=53.86 Aligned_cols=64 Identities=20% Similarity=0.173 Sum_probs=38.5
Q ss_pred EEEEEccCCCCCCcHH-HHHHHHHh-CCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCceee
Q 012311 161 KFGIIGDLGQTYNSLS-TLEHYMES-GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIE 236 (466)
Q Consensus 161 ~f~v~GD~g~~~~~~~-tl~~~~~~-~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~~ 236 (466)
|++++||.|....... .++.+... +.|-++++||++.....+ .+.++-+. ...+..+.||||..
T Consensus 18 ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s-----------~~vl~~l~-~~~~~~v~GNHE~~ 83 (218)
T PRK11439 18 HIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQS-----------LRCLQLLE-EHWVRAVRGNHEQM 83 (218)
T ss_pred eEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCH-----------HHHHHHHH-cCCceEeeCchHHH
Confidence 8999999998543322 23333222 568999999999432111 12222222 23467899999964
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=95.03 E-value=0.31 Score=57.65 Aligned_cols=49 Identities=10% Similarity=0.089 Sum_probs=30.9
Q ss_pred CCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHH-cCCcEEEecccceecC
Q 012311 307 EKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVR-YKVDYRISNLHYNISS 360 (466)
Q Consensus 307 ~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~-y~Vd~~~~gh~~~~~~ 360 (466)
.++.-+|++.|...-..... ...+ +....|.++ -+||.++.||.|....
T Consensus 233 ~gaDvII~l~H~G~~~~~~~--~~~e---n~~~~la~~~~gID~Il~GHsH~~~~ 282 (1163)
T PRK09419 233 GGADVIVALAHSGIESEYQS--SGAE---DSVYDLAEKTKGIDAIVAGHQHGLFP 282 (1163)
T ss_pred cCCCEEEEEeccCcCCCCCC--CCcc---hHHHHHHHhCCCCcEEEeCCCccccc
Confidence 56888999999987543211 1111 222334434 4899999999987643
|
|
| >cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.05 Score=53.71 Aligned_cols=68 Identities=18% Similarity=0.220 Sum_probs=40.0
Q ss_pred EEEEEccCCCCCCcHHH-HHHHHHh------CCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcC---CeEEcC
Q 012311 161 KFGIIGDLGQTYNSLST-LEHYMES------GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQ---PWIWSA 230 (466)
Q Consensus 161 ~f~v~GD~g~~~~~~~t-l~~~~~~------~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~---P~~~~~ 230 (466)
++.++||.|........ ++.+.+. ..+.++++||++.. .+. . ....+++..+...- .++.+.
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDR--GPd---S---~eVld~L~~l~~~~~~~~vv~Lr 74 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDR--GPE---T---RKVIDFLISLPEKHPKQRHVFLC 74 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCC--CCC---H---HHHHHHHHHhhhcccccceEEEe
Confidence 68899999986543332 3334322 24689999999943 211 1 22233333332222 478899
Q ss_pred CCceee
Q 012311 231 GNHEIE 236 (466)
Q Consensus 231 GNHE~~ 236 (466)
||||..
T Consensus 75 GNHE~~ 80 (304)
T cd07421 75 GNHDFA 80 (304)
T ss_pred cCChHH
Confidence 999954
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol |
| >cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.041 Score=52.01 Aligned_cols=62 Identities=23% Similarity=0.220 Sum_probs=37.7
Q ss_pred EEccCCCCCCcHHHHHHHHH----hCCCEEEEcccccccccccccccchhHHHHHHHHHHHhh-cCCeEEcCCCceee
Q 012311 164 IIGDLGQTYNSLSTLEHYME----SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAA-YQPWIWSAGNHEIE 236 (466)
Q Consensus 164 v~GD~g~~~~~~~tl~~~~~----~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~-~~P~~~~~GNHE~~ 236 (466)
++||+|... ..+..+.+ ...|.++++||++..... . .+..+.+..+.. ..+++.+.||||..
T Consensus 2 ~igDiHg~~---~~l~~~l~~~~~~~~d~li~lGD~vdrg~~------~--~~~l~~l~~~~~~~~~~~~l~GNHe~~ 68 (225)
T cd00144 2 VIGDIHGCL---DDLLRLLEKIGFPPNDKLIFLGDYVDRGPD------S--VEVIDLLLALKILPDNVILLRGNHEDM 68 (225)
T ss_pred EEeCCCCCH---HHHHHHHHHhCCCCCCEEEEECCEeCCCCC------c--HHHHHHHHHhcCCCCcEEEEccCchhh
Confidence 799999643 33333333 368999999999953211 1 222233322211 34789999999975
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate |
| >COG1692 Calcineurin-like phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.91 E-value=3.2 Score=39.75 Aligned_cols=193 Identities=16% Similarity=0.189 Sum_probs=104.0
Q ss_pred eEEEEEccCCCCCCcH---HHHHHHHHh-CCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCcee
Q 012311 160 YKFGIIGDLGQTYNSL---STLEHYMES-GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEI 235 (466)
Q Consensus 160 ~~f~v~GD~g~~~~~~---~tl~~~~~~-~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~ 235 (466)
+|++++||+=....-. .-|..+.+. ++|||+..|-++-..- .-.|+.+.++++. .+- .++.|||=+
T Consensus 1 mriLfiGDvvGk~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENaa~G~------Git~k~y~~l~~~---G~d-viT~GNH~w 70 (266)
T COG1692 1 MRILFIGDVVGKPGRKAVKEHLPQLKSKYKIDFVIVNGENAAGGF------GITEKIYKELLEA---GAD-VITLGNHTW 70 (266)
T ss_pred CeEEEEecccCcchHHHHHHHhHHHHHhhcCcEEEEcCccccCCc------CCCHHHHHHHHHh---CCC-EEecccccc
Confidence 4899999984433211 223444444 8999999999996432 2345555555543 232 468999988
Q ss_pred eccCcCCcccccccccccccCCCCCCC-CCCCceEEEeeCCEEEEEEcCCCC--CC-CChHHHHHHHHHHhhccCCCCCe
Q 012311 236 EYMTYMGEVVPFKSYLHRYPTPHLASK-SSSPLWYAIRRASAHIIVLSSYSP--FV-KYTPQWEWLREELKKVDREKTPW 311 (466)
Q Consensus 236 ~~~~~~~~~~~f~~y~~rf~~P~~~~~-~~~~~yYsf~~g~v~fI~Lds~~~--~~-~~~~Q~~WL~~~L~~~~r~~~~w 311 (466)
+.. +. ..|-.-..++-.|.|-+. ..+.-|+-|+..+..+.+++-... .. ....=.+=+++.|.+.+ .+++-
T Consensus 71 d~~-ei---~~~i~~~~~ilRP~N~p~~~~G~G~~~f~~ng~ki~V~Nl~Grv~m~~~~d~PF~~~d~l~~~~~-~~~~~ 145 (266)
T COG1692 71 DQK-EI---LDFIDNADRILRPANYPDGTPGKGSRIFKINGKKLAVINLMGRVFMPPALDNPFKAADKLLDEIK-LGTDL 145 (266)
T ss_pred cch-HH---HHHhhcccceeccCCCCCCCCcceEEEEEeCCcEEEEEEeeccccCccccCCHHHHHHHHHHhCc-cCCce
Confidence 632 11 111111123334554322 234567777887777766665321 11 01111233555555543 46688
Q ss_pred EEEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccceecCCcccccCCCCCcEEEE-eCCCCC
Q 012311 312 LIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYNISSGDCFPVPDKSAPVYIT-VGDGGN 382 (466)
Q Consensus 312 ~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~~~~~~~~~~~~~g~vyiv-~G~gG~ 382 (466)
+||-+|.---| ..++| -++-+-+|..++.-|.|-...+.- .-++|+.||+ +|.-|.
T Consensus 146 iiVDFHAEtTS-----------EK~a~-g~yldGrvsavvGTHTHV~TaD~r---IL~~GTayiTDvGMtG~ 202 (266)
T COG1692 146 IIVDFHAETTS-----------EKNAF-GWYLDGRVSAVVGTHTHVPTADER---ILPKGTAYITDVGMTGP 202 (266)
T ss_pred EEEEccccchh-----------hhhhh-heEEcCeEEEEEeccCccccccce---ecCCCcEEEecCccccc
Confidence 99999964322 11122 244445677888778764333221 2467899987 344443
|
|
| >cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.82 E-value=0.041 Score=53.65 Aligned_cols=64 Identities=25% Similarity=0.290 Sum_probs=38.4
Q ss_pred EEEccCCCCCCcHHH-HHHHHHh-CCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCceee
Q 012311 163 GIIGDLGQTYNSLST-LEHYMES-GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIE 236 (466)
Q Consensus 163 ~v~GD~g~~~~~~~t-l~~~~~~-~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~~ 236 (466)
.+|||.|........ ++++... +.|.++++||++..... . .+..+++..+. ..+..+.||||..
T Consensus 2 yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~------s--~evl~~l~~l~--~~v~~VlGNHD~~ 67 (257)
T cd07422 2 YAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPD------S--LETLRFVKSLG--DSAKTVLGNHDLH 67 (257)
T ss_pred EEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcC------H--HHHHHHHHhcC--CCeEEEcCCchHH
Confidence 579999975443322 2233212 57999999999953211 1 22333443332 3678999999975
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa |
| >KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.076 Score=53.04 Aligned_cols=109 Identities=18% Similarity=0.194 Sum_probs=67.0
Q ss_pred eEEEEEccCCCCCC-cHHHHHHHHHh---CCCEEEEcccccccccccc---cccchhHHHHHHHHH----HHhhcCCeEE
Q 012311 160 YKFGIIGDLGQTYN-SLSTLEHYMES---GAQTVLFLGDLSYADRYQF---IDVGVRWDSWGRFVE----RSAAYQPWIW 228 (466)
Q Consensus 160 ~~f~v~GD~g~~~~-~~~tl~~~~~~---~~dfvl~~GDl~Y~~~~~~---~d~~~~wd~~~~~~~----~l~~~~P~~~ 228 (466)
+|++|-|++|..-+ -..++..+.+. +.|++|..||+---.+... -.+.+.+.....++. ...+.+|.+.
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 47899999987543 34577777776 8999999999874322211 012333333333433 3346788999
Q ss_pred cCCCceeeccCcCCcccccccccccccCCCCCCCCCCCceE-----EEeeCCEEEEEEcC
Q 012311 229 SAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWY-----AIRRASAHIIVLSS 283 (466)
Q Consensus 229 ~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yY-----sf~~g~v~fI~Lds 283 (466)
+-||||..+- ...+|+.| -...+.|| ..++|+|++-.|+.
T Consensus 81 IGGNHEAsny--------------L~eLpyGG-wVApNIyYlG~agVv~~~gvRIggiSG 125 (456)
T KOG2863|consen 81 IGGNHEASNY--------------LQELPYGG-WVAPNIYYLGYAGVVNFGGVRIGGISG 125 (456)
T ss_pred ecCchHHHHH--------------HHhcccCc-eeccceEEeeecceEEECCEEEeeccc
Confidence 9999997531 11123221 01124565 36789999998887
|
|
| >PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=94.55 E-value=1.3 Score=50.00 Aligned_cols=49 Identities=18% Similarity=0.098 Sum_probs=29.7
Q ss_pred CCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHHc-CCcEEEecccceecCC
Q 012311 307 EKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRY-KVDYRISNLHYNISSG 361 (466)
Q Consensus 307 ~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y-~Vd~~~~gh~~~~~~~ 361 (466)
..+.-+||+.|..+-.... ..+ +..+-.. +.+. +||+++.||.|....+
T Consensus 243 ~GaDvIIaLsH~G~~~d~~---~~~--~ena~~~-l~~v~gID~IlgGHsH~~~~~ 292 (780)
T PRK09418 243 EGADVIVALAHSGVDKSGY---NVG--MENASYY-LTEVPGVDAVLMGHSHTEVKD 292 (780)
T ss_pred cCCCEEEEEeccCcccccc---ccc--chhhhHH-HhcCCCCCEEEECCCCCcccc
Confidence 4688899999987643211 111 1111112 3443 8999999999976543
|
|
| >KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=94.43 E-value=0.096 Score=54.97 Aligned_cols=45 Identities=20% Similarity=0.296 Sum_probs=34.5
Q ss_pred CCCeEEEEEccCCCCCC---------cHHHHHHH---HH-hCCCEEEEcccccccccc
Q 012311 157 DASYKFGIIGDLGQTYN---------SLSTLEHY---ME-SGAQTVLFLGDLSYADRY 201 (466)
Q Consensus 157 ~~~~~f~v~GD~g~~~~---------~~~tl~~~---~~-~~~dfvl~~GDl~Y~~~~ 201 (466)
+..+|++|..|.|.++. +..+++.+ ++ ++.||||..||++..+..
T Consensus 11 entirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkP 68 (646)
T KOG2310|consen 11 ENTIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENKP 68 (646)
T ss_pred ccceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCCc
Confidence 35799999999998763 45565554 33 499999999999987654
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=94.42 E-value=0.19 Score=55.31 Aligned_cols=86 Identities=23% Similarity=0.414 Sum_probs=53.7
Q ss_pred CCCceE-EEeeecCCCCcEEEEEEcCCCCCCc----EEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCC
Q 012311 57 NSPQQV-HITQGDYDGKAVIISWVTPHEPGPS----TVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (466)
Q Consensus 57 ~~P~qv-~lt~~~~~~~~~~V~W~t~~~~~~~----~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T 131 (466)
.+|.+| +|-+.....++++++|.-++.+... .|+|-+...+ ..+|+. -......|+|+||+|||
T Consensus 441 a~ps~V~~~r~~~~~~~sitlsW~~p~~png~ildYEvky~ek~~~--------e~~~~~---~~t~~~~~ti~gL~p~t 509 (996)
T KOG0196|consen 441 AAPSPVSVLRQVSRTSDSITLSWSEPDQPNGVILDYEVKYYEKDED--------ERSYST---LKTKTTTATITGLKPGT 509 (996)
T ss_pred cCCCccceEEEeeeccCceEEecCCCCCCCCcceeEEEEEeecccc--------ccceeE---EecccceEEeeccCCCc
Confidence 344442 2233333568999999998766433 4555554311 011110 01123458999999999
Q ss_pred EEEEEecc------CCccceEEEECCCC
Q 012311 132 KYYYKIGS------GDSSREFWFQTPPK 153 (466)
Q Consensus 132 ~Y~Yrv~~------~~~s~~~~F~T~p~ 153 (466)
.|.+||.. |..|....|.|.|.
T Consensus 510 ~YvfqVRarT~aG~G~~S~~~~fqT~~~ 537 (996)
T KOG0196|consen 510 VYVFQVRARTAAGYGPYSGKHEFQTLPS 537 (996)
T ss_pred EEEEEEEEecccCCCCCCCceeeeecCc
Confidence 99999964 35688899999986
|
|
| >cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=93.70 E-value=0.27 Score=47.23 Aligned_cols=86 Identities=9% Similarity=0.009 Sum_probs=48.8
Q ss_pred ceEEEeeCC--EEEEEEcCCCCC-----C-----CChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCcccccCHHH
Q 012311 267 LWYAIRRAS--AHIIVLSSYSPF-----V-----KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESM 334 (466)
Q Consensus 267 ~yYsf~~g~--v~fI~Lds~~~~-----~-----~~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~~~~~~ 334 (466)
.+..++.++ +-||.+-+...- . ....-.+-+++.+++++ .+...+||+.|-..-.. ......
T Consensus 122 ~~~i~~~~g~kVg~ig~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~lr-~~~D~vIv~~H~G~e~~-----~~p~~~ 195 (239)
T cd07381 122 RPAILEVNGIKVAFLAYTYGTNGIPLAAGARPGGVNPLDLERIAADIAEAK-KKADIVIVSLHWGVEYS-----YYPTPE 195 (239)
T ss_pred CcEEEEECCEEEEEEEEECCCCCCcCcccCCccccCccCHHHHHHHHHHHh-hcCCEEEEEecCcccCC-----CCCCHH
Confidence 455677777 556665543210 0 01111234555565553 24889999999543111 112223
Q ss_pred HHHHHHHHHHcCCcEEEeccccee
Q 012311 335 RAAFESWFVRYKVDYRISNLHYNI 358 (466)
Q Consensus 335 r~~l~~ll~~y~Vd~~~~gh~~~~ 358 (466)
+..+...+.+.|||+++.+|.|-+
T Consensus 196 ~~~la~~l~~~G~D~IiG~H~Hv~ 219 (239)
T cd07381 196 QRELARALIDAGADLVIGHHPHVL 219 (239)
T ss_pred HHHHHHHHHHCCCCEEEcCCCCcC
Confidence 345555666789999999998854
|
CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal |
| >KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=93.54 E-value=0.15 Score=58.24 Aligned_cols=81 Identities=23% Similarity=0.416 Sum_probs=50.7
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCCC------cEEEEeecCCCCc---eEEEeEEEEeeeeccccceEEEEEecCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPGP------STVSYGTSADKFD---FTAEGTVNNYTFYKYKSGYIHQCLVDGL 127 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~~------~~V~yg~~~~~~~---~~a~g~~~~y~~~~~~~~~~h~v~l~gL 127 (466)
.+|+.|.|-... +++++|+|..+..... -.++|++.+.... ..+.|+.+. -.+.+|
T Consensus 617 aPP~Nl~lev~s--StsVrVsW~pP~~~t~ng~itgYkIRy~~~~~~~~~~~t~v~~n~~~-------------~l~~~L 681 (1381)
T KOG4221|consen 617 APPQNLSLEVVS--STSVRVSWLPPPSETQNGQITGYKIRYRKLSREDEVNETVVKGNTTQ-------------YLFNGL 681 (1381)
T ss_pred CCCcceEEEecC--CCeEEEEccCCCcccccceEEEEEEEecccCcccccceeecccchhh-------------hHhhcC
Confidence 457778877664 7899999999853221 1345554433221 122232221 146789
Q ss_pred CCCCEEEEEecc------CCccceEEEECCC
Q 012311 128 EYDTKYYYKIGS------GDSSREFWFQTPP 152 (466)
Q Consensus 128 ~P~T~Y~Yrv~~------~~~s~~~~F~T~p 152 (466)
+|+|.|..||.. +..|++..|.|+-
T Consensus 682 ep~T~Y~vrIsa~t~nGtGpaS~w~~aeT~~ 712 (1381)
T KOG4221|consen 682 EPNTQYRVRISAMTVNGTGPASEWVSAETPE 712 (1381)
T ss_pred CCCceEEEEEEEeccCCCCCcccceeccCcc
Confidence 999999999954 3457788888864
|
|
| >TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | Back alignment and domain information |
|---|
Probab=93.54 E-value=0.11 Score=51.18 Aligned_cols=66 Identities=27% Similarity=0.331 Sum_probs=38.7
Q ss_pred EEEEEccCCCCCCcHHH-HHHHHHh-CCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCceee
Q 012311 161 KFGIIGDLGQTYNSLST-LEHYMES-GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIE 236 (466)
Q Consensus 161 ~f~v~GD~g~~~~~~~t-l~~~~~~-~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~~ 236 (466)
+..+|||.|........ ++++.-+ ..|-++++||++.....+ .+-.+++..+. -.+..+.||||..
T Consensus 2 ~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~s--------levL~~l~~l~--~~~~~VlGNHD~~ 69 (279)
T TIGR00668 2 ATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGS--------LEVLRYVKSLG--DAVRLVLGNHDLH 69 (279)
T ss_pred cEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCH--------HHHHHHHHhcC--CCeEEEEChhHHH
Confidence 46789999986543332 3333212 468999999999532211 22233333331 2356899999964
|
Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. |
| >COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion] | Back alignment and domain information |
|---|
Probab=93.51 E-value=0.092 Score=50.90 Aligned_cols=169 Identities=13% Similarity=0.146 Sum_probs=95.5
Q ss_pred EEEEccccccccccccccc--chhHHHHHHH----HHHHhhcCCeEEcCCCceeeccCcC--Ccc--cccccccc-----
Q 012311 188 TVLFLGDLSYADRYQFIDV--GVRWDSWGRF----VERSAAYQPWIWSAGNHEIEYMTYM--GEV--VPFKSYLH----- 252 (466)
Q Consensus 188 fvl~~GDl~Y~~~~~~~d~--~~~wd~~~~~----~~~l~~~~P~~~~~GNHE~~~~~~~--~~~--~~f~~y~~----- 252 (466)
-++..||++-..+...-++ ..+...|..- +.+....+|+++-.||||.+..... -+. ...+.|..
T Consensus 129 GlV~ggDitddgggq~~qprEg~ql~qf~~RYsq~vG~~h~H~PvYvGlgnhdldq~gpph~~DWyRrElrdyve~~Hr~ 208 (392)
T COG5555 129 GLVEGGDITDDGGGQSFQPREGNQLKQFELRYSQDVGNIHMHYPVYVGLGNHDLDQKGPPHSLDWYRRELRDYVENYHRS 208 (392)
T ss_pred eEEeecceeccCCCcccCccccchhhchHhhhccCCCCceeeeeeEeccCchhhcccCCCCchhHHHHHHHHHHHhhcCc
Confidence 4667789997655543321 1122222111 1133346899999999999743100 000 00122211
Q ss_pred -cccCCCCC--CCCCCCceEEEeeCCEEEEEEcCCCC-CCCC-hHHHHHHHHHHhhccCCCCCeEEEEecccc--ccCCC
Q 012311 253 -RYPTPHLA--SKSSSPLWYAIRRASAHIIVLSSYSP-FVKY-TPQWEWLREELKKVDREKTPWLIVLMHVPI--YNSNE 325 (466)
Q Consensus 253 -rf~~P~~~--~~~~~~~yYsf~~g~v~fI~Lds~~~-~~~~-~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~--y~s~~ 325 (466)
.|.-|... +-.....-||+|+|++|.+-+-.... -+.+ .--+-||+.+|........| ++++.|.-| +++..
T Consensus 209 ~vf~Kppvp~atYd~l~d~ySwdwgglhlvh~hrf~Gd~~~ga~sslpwlk~dl~~~aadgrp-v~LfqhyGwdtfstea 287 (392)
T COG5555 209 DVFWKPPVPPATYDQLKDRYSWDWGGLHLVHYHRFIGDAEPGANSSLPWLKVDLIYSAADGRP-VYLFQHYGWDTFSTEA 287 (392)
T ss_pred CcccCCCCCcccccccchheeccccceeEEEEeeeccccCCCccccCcceeccceeeccCCCc-eeehhhhCccceeccc
Confidence 12112111 12234456999999999987776431 1111 23467999999975434444 788889876 33332
Q ss_pred cc--------ccc------CHHHHHHHHHHHHHcCCcEEEecccce
Q 012311 326 AH--------FME------GESMRAAFESWFVRYKVDYRISNLHYN 357 (466)
Q Consensus 326 ~h--------~~~------~~~~r~~l~~ll~~y~Vd~~~~gh~~~ 357 (466)
+. .++ .+..|.++...++-|+|-..+.||.|.
T Consensus 288 wdpAsrT~Dd~Gsgaphww~a~er~all~~lqGYNvvg~fhGhkhd 333 (392)
T COG5555 288 WDPASRTLDDTGSGAPHWWPAPERGALLFFLQGYNVVGTFHGHKHD 333 (392)
T ss_pred cCchhcccccCCCCCCCCCCCCCcchHHHhhcCceeEEeccccccc
Confidence 21 011 245688999999999999999998763
|
|
| >cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin | Back alignment and domain information |
|---|
Probab=93.43 E-value=0.63 Score=35.58 Aligned_cols=69 Identities=20% Similarity=0.396 Sum_probs=39.6
Q ss_pred CceEEEeeecCCCCcEEEEEEcCCCCC----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEE
Q 012311 59 PQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYY 134 (466)
Q Consensus 59 P~qv~lt~~~~~~~~~~V~W~t~~~~~----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~ 134 (466)
|+.+.+.... ..++.|+|..+.... .-.|+|........ ..+. .......++.|.+|+|+++|.
T Consensus 4 p~~~~~~~~~--~~~~~v~W~~~~~~~~~~~~y~v~~~~~~~~~~-------~~~~---~~~~~~~~~~i~~l~p~~~Y~ 71 (93)
T cd00063 4 PTNLRVTDVT--STSVTLSWTPPEDDGGPITGYVVEYREKGSGDW-------KEVE---VTPGSETSYTLTGLKPGTEYE 71 (93)
T ss_pred CCCcEEEEec--CCEEEEEECCCCCCCCcceeEEEEEeeCCCCCC-------EEee---ccCCcccEEEEccccCCCEEE
Confidence 5555554443 578999998874321 23444444321111 1111 011244678899999999999
Q ss_pred EEecc
Q 012311 135 YKIGS 139 (466)
Q Consensus 135 Yrv~~ 139 (466)
++|..
T Consensus 72 ~~v~a 76 (93)
T cd00063 72 FRVRA 76 (93)
T ss_pred EEEEE
Confidence 99954
|
Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. |
| >TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase | Back alignment and domain information |
|---|
Probab=93.26 E-value=1.4 Score=48.51 Aligned_cols=47 Identities=11% Similarity=0.040 Sum_probs=28.6
Q ss_pred CCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHH-cCCcEEEecccceec
Q 012311 307 EKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVR-YKVDYRISNLHYNIS 359 (466)
Q Consensus 307 ~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~-y~Vd~~~~gh~~~~~ 359 (466)
..+.-+|++.|...-... ... ..+... .. |.+ -+||.++.||.|...
T Consensus 194 ~gaDvII~LsH~G~~~d~-~~~-~~en~~---~~-l~~v~gID~Il~GHsH~~~ 241 (626)
T TIGR01390 194 KGADIIVALAHSGISADP-YQP-GAENSA---YY-LTKVPGIDAVLFGHSHAVF 241 (626)
T ss_pred cCCCEEEEEeccCcCCCc-ccc-ccchHH---HH-HhcCCCCCEEEcCCCCccC
Confidence 468889999998764321 110 111111 11 334 489999999999754
|
2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a |
| >PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria | Back alignment and domain information |
|---|
Probab=93.07 E-value=2.5 Score=40.81 Aligned_cols=61 Identities=20% Similarity=0.224 Sum_probs=42.0
Q ss_pred HHHHHHHHHHhhccCCCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEeccccee
Q 012311 292 PQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYNI 358 (466)
Q Consensus 292 ~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~ 358 (466)
++.+.+++++++++ .+..++||++|.-. .+. ......++++..-|.+.|+|+++.+|.|-+
T Consensus 168 ~~~~~i~~~i~~~r-~~~D~vIv~~HwG~----e~~-~~p~~~q~~~a~~lidaGaDiIiG~HpHv~ 228 (250)
T PF09587_consen 168 PGIERIKEDIREAR-KKADVVIVSLHWGI----EYE-NYPTPEQRELARALIDAGADIIIGHHPHVI 228 (250)
T ss_pred chHHHHHHHHHHHh-cCCCEEEEEeccCC----CCC-CCCCHHHHHHHHHHHHcCCCEEEeCCCCcc
Confidence 34588888888875 67899999999632 111 112234445666666789999999998754
|
Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein []. |
| >smart00060 FN3 Fibronectin type 3 domain | Back alignment and domain information |
|---|
Probab=92.63 E-value=0.94 Score=33.44 Aligned_cols=71 Identities=18% Similarity=0.358 Sum_probs=40.4
Q ss_pred CceEEEeeecCCCCcEEEEEEcCCCCC--CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEEE
Q 012311 59 PQQVHITQGDYDGKAVIISWVTPHEPG--PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (466)
Q Consensus 59 P~qv~lt~~~~~~~~~~V~W~t~~~~~--~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Yr 136 (466)
|..+++.... .+++.|+|..+.... .-.++|........ +...... .....+.+.|.+|+|+++|.++
T Consensus 4 p~~~~~~~~~--~~~~~v~W~~~~~~~~~~y~~~~~~~~~~~~----~~~~~~~----~~~~~~~~~i~~L~~~~~Y~v~ 73 (83)
T smart00060 4 PSNLRVTDVT--STSVTLSWEPPPDDGITGYIVGYRVEYREEG----SSWKEVN----VTPSSTSYTLTGLKPGTEYEFR 73 (83)
T ss_pred CCcEEEEEEe--CCEEEEEECCCCCCCCCccEEEEEEEEecCC----CccEEEE----ecCCccEEEEeCcCCCCEEEEE
Confidence 4446666544 348999998553221 23566655433211 0011110 0111567899999999999999
Q ss_pred ecc
Q 012311 137 IGS 139 (466)
Q Consensus 137 v~~ 139 (466)
|..
T Consensus 74 v~a 76 (83)
T smart00060 74 VRA 76 (83)
T ss_pred EEE
Confidence 864
|
One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. |
| >PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C | Back alignment and domain information |
|---|
Probab=92.05 E-value=2.4 Score=40.91 Aligned_cols=177 Identities=16% Similarity=0.168 Sum_probs=83.8
Q ss_pred HHHHHHh-CCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCceeeccCcCCcccccccccccccC
Q 012311 178 LEHYMES-GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPT 256 (466)
Q Consensus 178 l~~~~~~-~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~~~~~~~~~~~~f~~y~~rf~~ 256 (466)
|..+.+. ++|||+..|.++-....- ....+.++++ ..+- ..+.|||=++... ..++-.-..+.-.
T Consensus 19 Lp~L~~~~~~DfVIaNgENaa~G~Gi------t~~~~~~L~~---~GvD-viT~GNH~wdkke----i~~~i~~~~~ilR 84 (253)
T PF13277_consen 19 LPELKEEYGIDFVIANGENAAGGFGI------TPKIAEELFK---AGVD-VITMGNHIWDKKE----IFDFIDKEPRILR 84 (253)
T ss_dssp HHHHGG--G-SEEEEE-TTTTTTSS--------HHHHHHHHH---HT-S-EEE--TTTTSSTT----HHHHHHH-SSEE-
T ss_pred HHHHHhhcCCCEEEECCcccCCCCCC------CHHHHHHHHh---cCCC-EEecCcccccCcH----HHHHHhcCCCcEE
Confidence 3344444 899999999999543221 1122222222 2343 3689999886421 1111111122223
Q ss_pred CCCCC-CCCCCceEEEeeCCEEEEEEcCCC--CCCCChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCcccccCHH
Q 012311 257 PHLAS-KSSSPLWYAIRRASAHIIVLSSYS--PFVKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGES 333 (466)
Q Consensus 257 P~~~~-~~~~~~yYsf~~g~v~fI~Lds~~--~~~~~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~~~~~ 333 (466)
|.|-+ +..+.-|..|+.++..+-++|-.. ......-=..-+++.|++. +.+++.+||=+|.= ...
T Consensus 85 PaN~p~~~pG~G~~i~~~~g~kv~ViNl~Gr~fm~~~~~PF~~~d~~l~~l-~~~~~~iiVDFHAE-----------aTS 152 (253)
T PF13277_consen 85 PANYPPGTPGRGYRIFEKNGKKVAVINLMGRVFMPPIDCPFRAADRLLEEL-KEETDIIIVDFHAE-----------ATS 152 (253)
T ss_dssp -TTS-TT-SSBSEEEEEETTEEEEEEEEE--TTS---S-HHHHHHHHHHH------SEEEEEEE-S------------HH
T ss_pred CCCCCCCCCcCcEEEEEECCEEEEEEECcccccCCCCCChHHHHHHHHHhc-cccCCEEEEEeecC-----------cHH
Confidence 54432 345567889999998888877632 1111111233344444443 25788999998842 222
Q ss_pred HHHHHHHHHHHcCCcEEEecccceecCCcccccCCCCCcEEEE-eCCCCCCC
Q 012311 334 MRAAFESWFVRYKVDYRISNLHYNISSGDCFPVPDKSAPVYIT-VGDGGNQE 384 (466)
Q Consensus 334 ~r~~l~~ll~~y~Vd~~~~gh~~~~~~~~~~~~~~~~g~vyiv-~G~gG~~~ 384 (466)
...+| -++.+=+|..++.-|+|=.+.+.. .-++|+-||+ +|.-|...
T Consensus 153 EK~A~-g~~lDGrvsaV~GTHTHVqTaDer---ILp~GTaYiTDvGMtG~~d 200 (253)
T PF13277_consen 153 EKQAM-GWYLDGRVSAVVGTHTHVQTADER---ILPGGTAYITDVGMTGPYD 200 (253)
T ss_dssp HHHHH-HHHHBTTBSEEEEESSSS-BS--E---E-TTS-EEES---EBEESS
T ss_pred HHHHH-HHHhCCcEEEEEeCCCCccCchhh---ccCCCCEEEecCccccCcc
Confidence 33333 366677999999999874333321 2467999997 55555544
|
|
| >PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=91.82 E-value=6.8 Score=43.47 Aligned_cols=47 Identities=9% Similarity=0.018 Sum_probs=28.0
Q ss_pred CCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHH-cCCcEEEecccceec
Q 012311 307 EKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVR-YKVDYRISNLHYNIS 359 (466)
Q Consensus 307 ~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~-y~Vd~~~~gh~~~~~ 359 (466)
..+.-+|++.|..+-........++ +-.. +.+ -+||.++.||.|...
T Consensus 217 ~gaDvII~LsH~G~~~d~~~~~aen-----~~~~-l~~v~gID~Il~GHsH~~~ 264 (649)
T PRK09420 217 KGADIVVAIPHSGISADPYKAMAEN-----SVYY-LSEVPGIDAIMFGHSHAVF 264 (649)
T ss_pred cCCCEEEEEecCCcCCCCccccccc-----hhHH-HhcCCCCCEEEeCCCCccC
Confidence 4688899999987633111000111 1112 233 489999999998754
|
|
| >COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.36 E-value=0.5 Score=42.01 Aligned_cols=65 Identities=23% Similarity=0.254 Sum_probs=40.1
Q ss_pred EEEEccCCCCCCc--------------HHHHHHHHHh-C-CCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCC
Q 012311 162 FGIIGDLGQTYNS--------------LSTLEHYMES-G-AQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQP 225 (466)
Q Consensus 162 f~v~GD~g~~~~~--------------~~tl~~~~~~-~-~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P 225 (466)
+..+||++.+... ...+..+.+. . -|.+.|+||++..-+. -....+.++.+-..+
T Consensus 6 myfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~--------~~~a~~IlerLnGrk- 76 (186)
T COG4186 6 MYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANR--------ERAAGLILERLNGRK- 76 (186)
T ss_pred EEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccch--------hhHHHHHHHHcCCcE-
Confidence 5567888765421 1223444443 4 4789999999953221 144566667665444
Q ss_pred eEEcCCCceee
Q 012311 226 WIWSAGNHEIE 236 (466)
Q Consensus 226 ~~~~~GNHE~~ 236 (466)
..++||||-.
T Consensus 77 -hlv~GNhDk~ 86 (186)
T COG4186 77 -HLVPGNHDKC 86 (186)
T ss_pred -EEeeCCCCCC
Confidence 8899999953
|
|
| >cd07416 MPP_PP2B PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=91.36 E-value=0.34 Score=48.50 Aligned_cols=65 Identities=22% Similarity=0.278 Sum_probs=37.9
Q ss_pred EEEEEccCCCCCCcHHHHHHHHHh----CCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCC--eEEcCCCce
Q 012311 161 KFGIIGDLGQTYNSLSTLEHYMES----GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQP--WIWSAGNHE 234 (466)
Q Consensus 161 ~f~v~GD~g~~~~~~~tl~~~~~~----~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P--~~~~~GNHE 234 (466)
+++++||+|.... .+.++.+. ..+-++++||++..... + -+-...+..+....| ++.+.||||
T Consensus 44 ~i~ViGDIHG~~~---dL~~l~~~~g~~~~~~ylFLGDyVDRG~~-s-------~Evi~lL~~lki~~p~~v~lLRGNHE 112 (305)
T cd07416 44 PVTVCGDIHGQFY---DLLKLFEVGGSPANTRYLFLGDYVDRGYF-S-------IECVLYLWALKILYPKTLFLLRGNHE 112 (305)
T ss_pred CEEEEEeCCCCHH---HHHHHHHhcCCCCCceEEEECCccCCCCC-h-------HHHHHHHHHHHhhcCCCEEEEeCCCc
Confidence 5889999997543 23333332 34789999999943211 1 112222223322334 788999999
Q ss_pred ee
Q 012311 235 IE 236 (466)
Q Consensus 235 ~~ 236 (466)
..
T Consensus 113 ~~ 114 (305)
T cd07416 113 CR 114 (305)
T ss_pred HH
Confidence 75
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G |
| >cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=91.13 E-value=0.36 Score=48.58 Aligned_cols=65 Identities=20% Similarity=0.138 Sum_probs=37.3
Q ss_pred EEEEEccCCCCCCcHHHHHHHHHh---C--CCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCC--eEEcCCCc
Q 012311 161 KFGIIGDLGQTYNSLSTLEHYMES---G--AQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQP--WIWSAGNH 233 (466)
Q Consensus 161 ~f~v~GD~g~~~~~~~tl~~~~~~---~--~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P--~~~~~GNH 233 (466)
++.|+||+|.... .+.++.+. . .+-+|++||++..... + -+. ...+-.+....| ++.+.|||
T Consensus 52 ~~~vvGDiHG~~~---dL~~il~~~g~~~~~~~~lFLGDyVDRG~~-s------~Ev-l~ll~~lk~~~p~~v~llRGNH 120 (321)
T cd07420 52 QVTICGDLHGKLD---DLFLIFYKNGLPSPENPYVFNGDFVDRGKR-S------IEI-LIILFAFFLVYPNEVHLNRGNH 120 (321)
T ss_pred CeEEEEeCCCCHH---HHHHHHHHcCCCCccceEEEeccccCCCCC-c------HHH-HHHHHHHhhcCCCcEEEecCch
Confidence 6789999987543 33333332 2 2579999999953221 1 111 222222221223 78899999
Q ss_pred eee
Q 012311 234 EIE 236 (466)
Q Consensus 234 E~~ 236 (466)
|..
T Consensus 121 E~~ 123 (321)
T cd07420 121 EDH 123 (321)
T ss_pred hhh
Confidence 975
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all |
| >smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Probab=90.61 E-value=0.46 Score=46.69 Aligned_cols=65 Identities=17% Similarity=0.167 Sum_probs=37.8
Q ss_pred EEEEEccCCCCCCcHHHHHHHHH----hCCCEEEEcccccccccccccccchhHHHHHHHHHHHhhc--CCeEEcCCCce
Q 012311 161 KFGIIGDLGQTYNSLSTLEHYME----SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAY--QPWIWSAGNHE 234 (466)
Q Consensus 161 ~f~v~GD~g~~~~~~~tl~~~~~----~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~--~P~~~~~GNHE 234 (466)
+++++||.|.... .+.++.+ ...+-++++||++.. |... -+-...+..+.-. --++.+.||||
T Consensus 29 ~i~vvGDiHG~~~---~l~~ll~~~~~~~~~~~vfLGD~VDr-G~~s-------~e~l~~l~~lk~~~p~~v~llrGNHE 97 (271)
T smart00156 29 PVTVCGDIHGQFD---DLLRLFDLNGPPPDTNYVFLGDYVDR-GPFS-------IEVILLLFALKILYPNRVVLLRGNHE 97 (271)
T ss_pred CEEEEEeCcCCHH---HHHHHHHHcCCCCCceEEEeCCccCC-CCCh-------HHHHHHHHHHHhcCCCCEEEEecccc
Confidence 5889999986543 3333332 255789999999943 2211 1112222222222 24789999999
Q ss_pred ee
Q 012311 235 IE 236 (466)
Q Consensus 235 ~~ 236 (466)
..
T Consensus 98 ~~ 99 (271)
T smart00156 98 SR 99 (271)
T ss_pred HH
Confidence 75
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. |
| >smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap | Back alignment and domain information |
|---|
Probab=89.81 E-value=1.8 Score=41.50 Aligned_cols=56 Identities=13% Similarity=0.135 Sum_probs=34.1
Q ss_pred HHHHHhhccCCCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEeccccee
Q 012311 297 LREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYNI 358 (466)
Q Consensus 297 L~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~ 358 (466)
+++++++++ .+...+||+.|--.-.. + .....+..+..-|.+.|||+++.+|.|-+
T Consensus 162 i~~~i~~lr-~~~D~vIv~~H~G~e~~---~--~p~~~~~~~A~~l~~~G~DvIiG~H~H~~ 217 (239)
T smart00854 162 ILADIARAR-KKADVVIVSLHWGVEYQ---Y--EPTDEQRELAHALIDAGADVVIGHHPHVL 217 (239)
T ss_pred HHHHHHHHh-ccCCEEEEEecCccccC---C--CCCHHHHHHHHHHHHcCCCEEEcCCCCcC
Confidence 444444443 35889999999765211 1 11122334555555589999999998854
|
This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein. |
| >cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=89.57 E-value=0.53 Score=46.65 Aligned_cols=21 Identities=5% Similarity=-0.020 Sum_probs=18.8
Q ss_pred HHHHHHHHHHcCCcEEEeccc
Q 012311 335 RAAFESWFVRYKVDYRISNLH 355 (466)
Q Consensus 335 r~~l~~ll~~y~Vd~~~~gh~ 355 (466)
.++.+..|++.+++..+.+|.
T Consensus 214 ~~~~~~Fl~~n~l~~iiR~He 234 (285)
T cd07415 214 QDVVEEFNHNNGLTLICRAHQ 234 (285)
T ss_pred HHHHHHHHHHCCCeEEEEcCc
Confidence 468889999999999999995
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2 |
| >cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=89.08 E-value=0.62 Score=46.35 Aligned_cols=21 Identities=5% Similarity=0.143 Sum_probs=18.6
Q ss_pred HHHHHHHHHHcCCcEEEeccc
Q 012311 335 RAAFESWFVRYKVDYRISNLH 355 (466)
Q Consensus 335 r~~l~~ll~~y~Vd~~~~gh~ 355 (466)
.++++..|++.|++..+-+|.
T Consensus 222 ~~~~~~Fl~~n~l~~iiR~He 242 (293)
T cd07414 222 KDVVAKFLNKHDLDLICRAHQ 242 (293)
T ss_pred HHHHHHHHHHcCCeEEEECCc
Confidence 468889999999999999995
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg |
| >PTZ00239 serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Probab=88.18 E-value=0.78 Score=45.85 Aligned_cols=21 Identities=0% Similarity=-0.107 Sum_probs=18.7
Q ss_pred HHHHHHHHHHcCCcEEEeccc
Q 012311 335 RAAFESWFVRYKVDYRISNLH 355 (466)
Q Consensus 335 r~~l~~ll~~y~Vd~~~~gh~ 355 (466)
.++++..|++.+++..+-+|.
T Consensus 215 ~~~~~~Fl~~n~l~~iiR~He 235 (303)
T PTZ00239 215 AKVTKEFCRLNDLTLICRAHQ 235 (303)
T ss_pred HHHHHHHHHHCCCcEEEEcCh
Confidence 468889999999999999995
|
|
| >cd07418 MPP_PP7 PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=88.18 E-value=0.81 Score=46.99 Aligned_cols=21 Identities=10% Similarity=0.158 Sum_probs=18.8
Q ss_pred HHHHHHHHHHcCCcEEEeccc
Q 012311 335 RAAFESWFVRYKVDYRISNLH 355 (466)
Q Consensus 335 r~~l~~ll~~y~Vd~~~~gh~ 355 (466)
.++++..|+++++++.+-+|.
T Consensus 273 ~~~~~~FL~~n~l~~IIRsHe 293 (377)
T cd07418 273 PDCTEEFLEKNNLKLIIRSHE 293 (377)
T ss_pred HHHHHHHHHHcCCcEEEECCC
Confidence 468889999999999999996
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, |
| >cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=87.82 E-value=0.47 Score=42.35 Aligned_cols=64 Identities=14% Similarity=0.237 Sum_probs=39.1
Q ss_pred EEEccCCCCCCc-HHHHHHHHHh--CCCEEEEcccccccccccccccchhHHHHHHHHHH-HhhcCCeEEcCCCce
Q 012311 163 GIIGDLGQTYNS-LSTLEHYMES--GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVER-SAAYQPWIWSAGNHE 234 (466)
Q Consensus 163 ~v~GD~g~~~~~-~~tl~~~~~~--~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~-l~~~~P~~~~~GNHE 234 (466)
+|+||.+..-.. ...++.+.+. +.|++|.+||+.-.+.. . +.|...+.. ....+|.+.+-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~-----~---~~~~~y~~g~~~~pipTyf~ggn~~ 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDED-----D---EELEAYKDGSKKVPIPTYFLGGNNP 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccc-----h---hhHHHHhcCCccCCCCEEEECCCCC
Confidence 367887654321 2334443332 78999999999954321 1 233333332 235789999999998
|
CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site |
| >PTZ00480 serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=87.02 E-value=0.94 Score=45.59 Aligned_cols=21 Identities=5% Similarity=0.143 Sum_probs=18.8
Q ss_pred HHHHHHHHHHcCCcEEEeccc
Q 012311 335 RAAFESWFVRYKVDYRISNLH 355 (466)
Q Consensus 335 r~~l~~ll~~y~Vd~~~~gh~ 355 (466)
.++++..|+++++++.+-+|.
T Consensus 231 ~~~~~~Fl~~n~l~~IiR~Hq 251 (320)
T PTZ00480 231 QEIVQVFLKKHELDLICRAHQ 251 (320)
T ss_pred HHHHHHHHHhCCCcEEEEcCc
Confidence 568889999999999999995
|
|
| >cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=86.38 E-value=1.1 Score=45.01 Aligned_cols=21 Identities=10% Similarity=0.229 Sum_probs=18.5
Q ss_pred HHHHHHHHHHcCCcEEEeccc
Q 012311 335 RAAFESWFVRYKVDYRISNLH 355 (466)
Q Consensus 335 r~~l~~ll~~y~Vd~~~~gh~ 355 (466)
.++++..|++.+++..+.+|.
T Consensus 233 ~~~~~~Fl~~n~l~~iiR~He 253 (316)
T cd07417 233 PDVTKRFLEENNLEYIIRSHE 253 (316)
T ss_pred HHHHHHHHHHcCCcEEEECCc
Confidence 467889999999999999995
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel |
| >PTZ00244 serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Probab=85.98 E-value=0.86 Score=45.34 Aligned_cols=21 Identities=5% Similarity=0.113 Sum_probs=18.7
Q ss_pred HHHHHHHHHHcCCcEEEeccc
Q 012311 335 RAAFESWFVRYKVDYRISNLH 355 (466)
Q Consensus 335 r~~l~~ll~~y~Vd~~~~gh~ 355 (466)
.++.+..|++.+++..+-+|.
T Consensus 224 ~~~~~~Fl~~n~l~~iiR~Hq 244 (294)
T PTZ00244 224 EDIVNDFLDMVDMDLIVRAHQ 244 (294)
T ss_pred HHHHHHHHHHcCCcEEEEcCc
Confidence 467889999999999999995
|
|
| >cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=85.91 E-value=1.4 Score=44.14 Aligned_cols=21 Identities=5% Similarity=0.063 Sum_probs=18.7
Q ss_pred HHHHHHHHHHcCCcEEEeccc
Q 012311 335 RAAFESWFVRYKVDYRISNLH 355 (466)
Q Consensus 335 r~~l~~ll~~y~Vd~~~~gh~ 355 (466)
.++++..|+++|++..+-||.
T Consensus 242 ~~~~~~Fl~~n~l~~iiRgHe 262 (311)
T cd07419 242 PDRVHRFLEENDLQMIIRAHE 262 (311)
T ss_pred HHHHHHHHHHCCCeEEEEech
Confidence 468889999999999999996
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most |
| >KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=85.79 E-value=3.4 Score=47.41 Aligned_cols=72 Identities=22% Similarity=0.310 Sum_probs=47.8
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCC----CCCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHE----PGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~----~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~ 132 (466)
.+|+.+++...+ .++|.|+|..+.. ...-.|+|+...+.. +...... ..+-.-.++|+||+|+|.
T Consensus 821 ~ap~~~~~~~~s--~s~~~v~W~~~~~~nG~l~gY~v~Y~~~~~~~-----~~~~~~~----i~~~~~~~~ltgL~~~T~ 889 (1051)
T KOG3513|consen 821 VAPTKLSAKPLS--SSEVNLSWKPPLWDNGKLTGYEVKYWKINEKE-----GSLSRVQ----IAGNRTSWRLTGLEPNTK 889 (1051)
T ss_pred CCCccceeeccc--CceEEEEecCcCccCCccceeEEEEEEcCCCc-----cccccee----ecCCcceEeeeCCCCCce
Confidence 468888776554 6899999965532 224589999887653 1111111 123334579999999999
Q ss_pred EEEEecc
Q 012311 133 YYYKIGS 139 (466)
Q Consensus 133 Y~Yrv~~ 139 (466)
|+..|..
T Consensus 890 Y~~~vrA 896 (1051)
T KOG3513|consen 890 YRFYVRA 896 (1051)
T ss_pred EEEEEEE
Confidence 9999865
|
|
| >COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=83.69 E-value=3.1 Score=43.68 Aligned_cols=80 Identities=15% Similarity=0.281 Sum_probs=50.3
Q ss_pred CCCeEEEEEccCCCCCCcH--HHHHHHHH---------hCCCEEEEcccccccccccc--------cccchhHHHHHHHH
Q 012311 157 DASYKFGIIGDLGQTYNSL--STLEHYME---------SGAQTVLFLGDLSYADRYQF--------IDVGVRWDSWGRFV 217 (466)
Q Consensus 157 ~~~~~f~v~GD~g~~~~~~--~tl~~~~~---------~~~dfvl~~GDl~Y~~~~~~--------~d~~~~wd~~~~~~ 217 (466)
...++.++++|.+.+.... .......+ .+...++.+||.+-.-+... .|...+++++.+++
T Consensus 223 ~e~v~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L 302 (481)
T COG1311 223 DERVYVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFL 302 (481)
T ss_pred CcceEEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHH
Confidence 3578899999999864211 11111111 13478999999995332211 12233556666666
Q ss_pred HHHhhcCCeEEcCCCceee
Q 012311 218 ERSAAYQPWIWSAGNHEIE 236 (466)
Q Consensus 218 ~~l~~~~P~~~~~GNHE~~ 236 (466)
...-..+-+++.|||||..
T Consensus 303 ~~vp~~I~v~i~PGnhDa~ 321 (481)
T COG1311 303 DQVPEHIKVFIMPGNHDAV 321 (481)
T ss_pred hhCCCCceEEEecCCCCcc
Confidence 6666778899999999975
|
|
| >PRK10301 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=82.17 E-value=24 Score=30.28 Aligned_cols=32 Identities=13% Similarity=0.069 Sum_probs=18.8
Q ss_pred eEEEEEec-CCCCCC-EEEEEeccC---CccceEEEE
Q 012311 118 YIHQCLVD-GLEYDT-KYYYKIGSG---DSSREFWFQ 149 (466)
Q Consensus 118 ~~h~v~l~-gL~P~T-~Y~Yrv~~~---~~s~~~~F~ 149 (466)
....+.+. +|.||+ +-.||+-+. ..+..++|+
T Consensus 86 ~~~~v~l~~~L~~G~YtV~Wrvvs~DGH~~~G~~~F~ 122 (124)
T PRK10301 86 KQLIVPLADSLKPGTYTVDWHVVSVDGHKTKGHYTFS 122 (124)
T ss_pred cEEEEECCCCCCCccEEEEEEEEecCCCccCCeEEEE
Confidence 44467775 699996 556676543 134455553
|
|
| >KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=80.49 E-value=6.8 Score=45.48 Aligned_cols=95 Identities=15% Similarity=0.255 Sum_probs=52.6
Q ss_pred EeeecCCCCcEEEEEEcCCCCCCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEEEecc----
Q 012311 64 ITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGS---- 139 (466)
Q Consensus 64 lt~~~~~~~~~~V~W~t~~~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Yrv~~---- 139 (466)
|........++.|.|..+.-.+.....|..--... -.|....+ ..--++.+|.||+|.|.|.|||..
T Consensus 527 ~~a~ats~~ti~v~WepP~~~n~~I~~yk~~ys~~---~~~~~~~~------~~n~~e~ti~gL~k~TeY~~~vvA~N~~ 597 (1381)
T KOG4221|consen 527 LQAYATSPTTILVTWEPPPFGNGPITGYKLFYSED---DTGKELRV------ENNATEYTINGLEKYTEYSIRVVAYNSA 597 (1381)
T ss_pred ccccccCcceEEEEecCCCCCCCCceEEEEEEEcC---CCCceEEE------ecCccEEEeecCCCccceEEEEEEecCC
Confidence 44444456899999999864444444443211000 00111111 112345688899999999999954
Q ss_pred --CCccceEEEECCCCC-C-CCCCeEEEEEcc
Q 012311 140 --GDSSREFWFQTPPKI-D-PDASYKFGIIGD 167 (466)
Q Consensus 140 --~~~s~~~~F~T~p~~-g-~~~~~~f~v~GD 167 (466)
+..|...+|+|+-.. + +...++..+..-
T Consensus 598 G~g~sS~~i~V~Tlsd~PsaPP~Nl~lev~sS 629 (1381)
T KOG4221|consen 598 GSGVSSADITVRTLSDVPSAPPQNLSLEVVSS 629 (1381)
T ss_pred CCCCCCCceEEEeccCCCCCCCcceEEEecCC
Confidence 235677788876321 1 123455555543
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 466 | ||||
| 1xzw_A | 426 | Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPL | 1e-144 | ||
| 1kbp_A | 432 | Kidney Bean Purple Acid Phosphatase Length = 432 | 1e-135 | ||
| 2qfp_A | 424 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 1e-134 | ||
| 4dsy_A | 426 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 1e-134 |
| >pdb|1XZW|A Chain A, Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPLEX Length = 426 | Back alignment and structure |
|
| >pdb|1KBP|A Chain A, Kidney Bean Purple Acid Phosphatase Length = 432 | Back alignment and structure |
|
| >pdb|2QFP|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Fluoride Length = 424 | Back alignment and structure |
|
| >pdb|4DSY|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Maybridge Fragment Cc24201 Length = 426 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 466 | |||
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 1e-146 | |
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 1e-145 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 2e-24 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 3e-19 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-04 |
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 Length = 426 | Back alignment and structure |
|---|
Score = 422 bits (1087), Expect = e-146
Identities = 248/424 (58%), Positives = 307/424 (72%), Gaps = 17/424 (4%)
Query: 38 WPSIDIPLDNEAFAVPKGHNSPQQVHITQGDYDGKAVIISWVTPH-EPGPSTVSYGTSAD 96
+D+P D++ FAVP G+N+PQQVHITQGDY+G+ VIISW TP+ + G + V Y +
Sbjct: 4 AEDVDMPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENS 63
Query: 97 KFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGSGDSSREFWFQTPPKIDP 156
K A GTV Y +Y Y S +IH C + LEYDTKYYY++G GD+ R+FWF TPPK P
Sbjct: 64 KSQKRAMGTVVTYKYYNYTSAFIHHCTIKDLEYDTKYYYRLGFGDAKRQFWFVTPPKPGP 123
Query: 157 DASYKFGIIGDLGQTYNSLSTLEHYMESG--AQTVLFLGDLSYADRYQFIDVGVRWDSWG 214
D Y FG+IGD+GQT++S +TL HY ++ Q VLF+GDLSY++R+ D RWD+WG
Sbjct: 124 DVPYVFGLIGDIGQTHDSNTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHD-NNRWDTWG 182
Query: 215 RFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRA 274
RF ERS AYQPWIW+AGNHEI+Y +GE PF + +RYPTPH AS S PLWYAI+RA
Sbjct: 183 RFSERSVAYQPWIWTAGNHEIDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRA 242
Query: 275 SAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESM 334
SAHIIVLSSYS FVKY+PQ++W EL+KV+R +TPWLIVL+H P+YNS EAH+MEGE+M
Sbjct: 243 SAHIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGEAM 302
Query: 335 RAAFESWFVRYKVD-------------YRISNLHYNISSGDCFPVPDKSAPVYITVGDGG 381
RA FE +FV YKVD R+SN+ YNI + C PV D+SAPVYIT+GDGG
Sbjct: 303 RAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNIVNAKCTPVSDESAPVYITIGDGG 362
Query: 382 NQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGKKVATDSFILHNQ 441
N EGLA + PQP YSAFREAS+GH +IKNRTHA + W+RN DG V DS L N+
Sbjct: 363 NSEGLASEMTQPQPSYSAFREASFGHGIFDIKNRTHAHFSWHRNQDGASVEADSLWLLNR 422
Query: 442 YWAS 445
YWAS
Sbjct: 423 YWAS 426
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* Length = 424 | Back alignment and structure |
|---|
Score = 419 bits (1079), Expect = e-145
Identities = 232/417 (55%), Positives = 296/417 (70%), Gaps = 16/417 (3%)
Query: 42 DIPLDNEAFAVPKGHNSPQQVHITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFT 101
D+PLD++ F VP G+N+PQQVHITQGD G+A+IISWVT EPG S V Y + +
Sbjct: 2 DMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRI 61
Query: 102 AEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDASYK 161
A+G ++ Y F+ Y SG+IH + L+Y+TKYYY++G +++R F F TPP+ D Y
Sbjct: 62 AKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRNTTRRFSFITPPQTGLDVPYT 121
Query: 162 FGIIGDLGQTYNSLSTLEHYMESG--AQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVER 219
FG+IGDLGQ+++S +TL HY S QTVLF+GDLSYADRY D VRWD+WGRF ER
Sbjct: 122 FGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHD-NVRWDTWGRFTER 180
Query: 220 SAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHII 279
S AYQPWIW+AGNHEIE+ + E PFK + +RY P+ AS+S+SP WY+I+RASAHII
Sbjct: 181 SVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHII 240
Query: 280 VLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFE 339
VLSSYS + + TPQ+ WL++EL+KV R +TPWLIVLMH P+YNS HFMEGE+MR FE
Sbjct: 241 VLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFE 300
Query: 340 SWFVRYKVD-------------YRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGL 386
+WFV+YKVD R+SN+ Y I++G C PV D+SAPVYIT+GD GN +
Sbjct: 301 AWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYGVI 360
Query: 387 AGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGKKVATDSFILHNQYW 443
PQP+YSAFREAS+GH +IKNRTHA + WNRN DG V DS N++W
Sbjct: 361 DSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRHW 417
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* Length = 313 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 2e-24
Identities = 53/334 (15%), Positives = 96/334 (28%), Gaps = 60/334 (17%)
Query: 156 PDASYKFGIIGDLGQTYNSLSTLEHYM-----------ESGAQTVLFLGDLSYADRYQFI 204
P +F +GD G N+ M GA +L LGD Y
Sbjct: 3 PTPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDA 62
Query: 205 DVGVRWDSW--GRFVERSAAYQPWIWSAGNHEIEY----MTYMGEVVPFKSYLHRYPTPH 258
R+ F + S PW AGNH+ ++ ++ Y
Sbjct: 63 K-DKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFPSPYYRLR 121
Query: 259 LASKSSSPLWYAIRRASAHIIVLSSYSP---------FVKYTPQWEWLREELKKVDREKT 309
S+ + + S Q W++++L K
Sbjct: 122 FKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAA---KE 178
Query: 310 PWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRIS--NLHYNISSGDCFPVP 367
+++V H P+++ E H + +KV + + +
Sbjct: 179 DYVLVAGHYPVWSIAE-HGPTHC-LVKQLLPLLTTHKVTAYLCGHDHNLQYL-------Q 229
Query: 368 DKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAF----REASYGHSTLEIKNR--THAFYH 421
D++ ++ G G + R Y F + G + +EI + + +
Sbjct: 230 DENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEITPKEMSVTYI- 288
Query: 422 WNRNDDGKKVATDSFILHNQYWASNRRRRKLNKH 455
GK + L RR R ++H
Sbjct: 289 ---EASGKSL--FKTKLP-------RRARSEHQH 310
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} Length = 342 | Back alignment and structure |
|---|
Score = 87.7 bits (216), Expect = 3e-19
Identities = 47/312 (15%), Positives = 87/312 (27%), Gaps = 56/312 (17%)
Query: 158 ASYKFGIIGDLG-----QTYNSLSTLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDS 212
+F +GD G Q N+ + ++ G D W +
Sbjct: 2 CQLRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFIDGVKGLNDP--AWKN 59
Query: 213 WGRFV---ERSAAYQPWIWSAGNHEIEYM--------------TYMGEVVPFKSYLHRYP 255
V E+ Y P+ G + + + YP
Sbjct: 60 LYEDVYSEEKGDMYMPFFTVLGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYP 119
Query: 256 ------------TPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTP------QWEWL 297
T S S + + +A I + ++ + W L
Sbjct: 120 KWIMPNYWYHYFTHFTVSSGPSIVKTGHKDLAAAFIFIDTWVLSSNFPYKKIHEKAWNDL 179
Query: 298 REELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYN 357
+ +L + ++IV+ PIY+S + + +VD IS H N
Sbjct: 180 KSQLSVAK-KIADFIIVVGDQPIYSS--GYSRGSSYLAYYLLPLLKDAEVDLYISG-HDN 235
Query: 358 ISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTH 417
V + + +IT G G +G + S F + G E+ +
Sbjct: 236 -----NMEVIEDNDMAHITCGSGSMSQGK----SGMKNSKSLFFSSDIGFCVHEL-SNNG 285
Query: 418 AFYHWNRNDDGK 429
+ + G+
Sbjct: 286 IVTKFVSSKKGE 297
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 41.8 bits (97), Expect = 5e-04
Identities = 40/242 (16%), Positives = 73/242 (30%), Gaps = 64/242 (26%)
Query: 59 PQQVHITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFD--FTAEGTVNNYTFYKY-- 114
P HI + + W + V +K E T
Sbjct: 382 PPSAHIPT-----ILLSLIWFDVIKSDVMVV-----VNKLHKYSLVEKQPKESTISIPSI 431
Query: 115 ---------KSGYIHQCLVDGLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGII 165
+H+ +VD Y+ + + PP +D Y + I
Sbjct: 432 YLELKVKLENEYALHRSIVD--HYNIPKTF---------DSDDLIPPYLD---QYFYSHI 477
Query: 166 GDLGQTYNSLSTLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAA--- 222
G ++ L +EH ++FL D F++ +R DS S
Sbjct: 478 G-----HH-LKNIEHPERMTLFRMVFL-DFR------FLEQKIRHDSTAWNASGSILNTL 524
Query: 223 -----YQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAH 277
Y+P+I +++ +Y + ++ F L + + SK + L A+
Sbjct: 525 QQLKFYKPYI---CDNDPKYERLVNAILDF---LPKIEENLICSKYTDLLRIALMAEDEA 578
Query: 278 II 279
I
Sbjct: 579 IF 580
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 466 | |||
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 100.0 | |
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 100.0 | |
| 2yeq_A | 527 | Apased, PHOD, alkaline phosphatase D; hydrolase, p | 100.0 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 100.0 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 99.97 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 99.87 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 99.85 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 99.84 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 99.74 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 99.3 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 99.28 | |
| 2q8u_A | 336 | Exonuclease, putative; structural genomics, joint | 99.23 | |
| 1z2w_A | 192 | Vacuolar protein sorting 29; VPS29, retromer, phos | 99.02 | |
| 2a22_A | 215 | Vacuolar protein sorting 29; alpha-beta-BETA-alpha | 98.95 | |
| 1nnw_A | 252 | Hypothetical protein; structural genomics, PSI, pr | 98.84 | |
| 3rl5_A | 296 | Metallophosphoesterase mpped2; alpha-beta fold, me | 98.84 | |
| 3av0_A | 386 | DNA double-strand break repair protein MRE11; DNA | 98.83 | |
| 3ck2_A | 176 | Conserved uncharacterized protein (predicted phosp | 98.82 | |
| 3qfm_A | 270 | SAPH, putative uncharacterized protein; sandwich f | 98.8 | |
| 3tho_B | 379 | Exonuclease, putative; adenosine triphosphate, bac | 98.78 | |
| 1xm7_A | 195 | Hypothetical protein AQ_1665; structural genomics, | 98.6 | |
| 3rqz_A | 246 | Metallophosphoesterase; PSI-biology, midwest cente | 98.56 | |
| 2kkn_A | 178 | Uncharacterized protein; protein phosphatase 2A ho | 98.54 | |
| 1s3l_A | 190 | Hypothetical protein MJ0936; phosphodiesterase, nu | 98.38 | |
| 4fbw_A | 417 | DNA repair protein RAD32; DNA double-strand break | 98.37 | |
| 4fbk_A | 472 | DNA repair and telomere maintenance protein NBS1, | 98.35 | |
| 1hp1_A | 516 | 5'-nucleotidase; metallophosphatase, dinuclear, me | 98.1 | |
| 2z1a_A | 552 | 5'-nucleotidase; metal-binding, nucleotide-binding | 98.06 | |
| 1ii7_A | 333 | MRE11 nuclease; RAD50, DNA double-strand break rep | 97.98 | |
| 3qfk_A | 527 | Uncharacterized protein; structural genomics, cent | 97.86 | |
| 2wdc_A | 562 | SOXB, sulfur oxidation protein SOXB; sulfur-sulfur | 97.82 | |
| 3t1i_A | 431 | Double-strand break repair protein MRE11A; DNA rep | 97.8 | |
| 2ede_A | 114 | Netrin receptor DCC; tumor suppressor protein DCC, | 97.79 | |
| 4h2g_A | 546 | 5'-nucleotidase; dimer, hydrolase, phosphatase, ex | 97.78 | |
| 3ztv_A | 579 | NAD nucleotidase, NADN; hydrolase, NAD pyrophospha | 97.75 | |
| 2edd_A | 123 | Netrin receptor DCC; tumor suppressor protein DCC, | 97.7 | |
| 3ive_A | 509 | Nucleotidase; structural genomics, PSI-2, protein | 97.64 | |
| 1t71_A | 281 | Phosphatase, conserved HYPO; crystal, X-RAY crysta | 97.6 | |
| 2dm4_A | 108 | Sortilin-related receptor; beta-sandwich, sorting | 97.57 | |
| 1x5l_A | 111 | Ephrin type-A receptor 8; FN3 domain, structural g | 97.54 | |
| 1x4x_A | 106 | Fibronectin type-III domain containing protein 3A; | 97.51 | |
| 1x4y_A | 114 | Biregional cell adhesion molecule-related/DOWN- re | 97.46 | |
| 1su1_A | 208 | Hypothetical protein YFCE; structural genomics, ph | 97.41 | |
| 2haz_A | 105 | N-CAM 1, neural cell adhesion molecule 1; fibronec | 97.38 | |
| 2edy_A | 103 | Receptor-type tyrosine-protein phosphatase F; LAR | 97.35 | |
| 1x5j_A | 113 | Neogenin; RGM binding, fibronectin type III domain | 97.33 | |
| 1x5f_A | 120 | Neogenin; RGM binding, fibronectin type III domain | 97.31 | |
| 2ed7_A | 119 | Netrin receptor DCC; tumor suppressor protein DCC, | 97.28 | |
| 2djs_A | 108 | Ephrin type-B receptor 1; tyrosine-protein kinase | 97.28 | |
| 1x5a_A | 107 | Ephrin type-A receptor 1; tyrosine-protein kinase | 97.26 | |
| 2z06_A | 252 | Putative uncharacterized protein TTHA0625; metal b | 97.25 | |
| 2e7h_A | 109 | Ephrin type-B receptor 4; FN3 domain, tyrosine- pr | 97.25 | |
| 1x5g_A | 116 | Neogenin; RGM binding, fibronectin type III domain | 97.23 | |
| 2ed8_A | 106 | Netrin receptor DCC; tumor suppressor protein DCC, | 97.19 | |
| 2crz_A | 110 | Fibronectin type-III domain containing protein 3A; | 97.11 | |
| 2ee2_A | 119 | Contactin-1; neural cell surface protein F3, glyco | 97.09 | |
| 2db8_A | 110 | Tripartite motif protein 9, isoform 2; ring finger | 97.06 | |
| 1t70_A | 255 | Phosphatase; crystal, X-RAY crystallography, struc | 97.05 | |
| 2dju_A | 106 | Receptor-type tyrosine-protein phosphatase F; LAR | 97.03 | |
| 3c9f_A | 557 | 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, p | 96.99 | |
| 2dmk_A | 127 | Midline 2 isoform 2; midline defect 2, tripartite | 96.93 | |
| 2e3v_A | 122 | Neural cell adhesion molecule 1, 140 kDa isoform; | 96.92 | |
| 2dkm_A | 104 | Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, | 96.91 | |
| 1x5x_A | 109 | Fibronectin type-III domain containing protein 3A; | 96.91 | |
| 2ed9_A | 124 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.89 | |
| 3gve_A | 341 | YFKN protein; alpha-beta-BETA-alpha sandwich, stru | 96.84 | |
| 1x5z_A | 115 | Receptor-type tyrosine-protein phosphatase delta; | 96.81 | |
| 1x3d_A | 118 | Fibronectin type-III domain containing protein 3A; | 96.81 | |
| 1va9_A | 122 | DOWN syndrome cell adhesion molecule like- protein | 96.8 | |
| 3n1f_C | 102 | Cell adhesion molecule-related/DOWN-regulated BY; | 96.78 | |
| 1wfo_A | 130 | Sidekick 2; FN3, cell adhesion, structural genomic | 96.77 | |
| 1v5j_A | 108 | KIAA1355 protein, RSGI RUH-008; FN3 domain, human | 96.75 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 96.72 | |
| 2rb8_A | 104 | Tenascin; beta sheet,loop design, alternative spli | 96.69 | |
| 2kbg_A | 114 | N-CAM 2, neural cell adhesion molecule 2; fibronec | 96.62 | |
| 1x4z_A | 121 | Biregional cell adhesion molecule-related/DOWN- re | 96.61 | |
| 1wk0_A | 137 | KIAA0970 protein; fibronectin type III domain, str | 96.59 | |
| 2dlh_A | 121 | Receptor-type tyrosine-protein phosphatase delta; | 96.58 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 96.56 | |
| 1x5h_A | 132 | Neogenin; RGM binding, fibronectin type III domain | 96.54 | |
| 1wfu_A | 120 | Unnamed protein product; FN3 domain, similar to 17 | 96.54 | |
| 1k85_A | 88 | Chitinase A1; fibronectin type III domain, chitin | 96.54 | |
| 2crm_A | 120 | Fibronectin type-III domain containing protein 3A; | 96.51 | |
| 2dle_A | 104 | Receptor-type tyrosine-protein phosphatase ETA; pr | 96.48 | |
| 2edx_A | 134 | Protein tyrosine phosphatase, receptor type, F; LA | 96.44 | |
| 1uc6_A | 109 | CNTF receptor, ciliary neurotrophic factor recepto | 96.41 | |
| 1wis_A | 124 | KIAA1514 protein; FNIII domain, sidekick-2, struct | 96.38 | |
| 2cuh_A | 115 | Tenascin-X; fibronectin type III domain, extracell | 96.38 | |
| 1bqu_A | 215 | Protein (GP130); cytokine receptor, glycoprotein 1 | 96.36 | |
| 3b83_A | 100 | Ten-D3; beta sheet, computational redesigned prote | 96.36 | |
| 1uen_A | 125 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 96.34 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 96.33 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 96.31 | |
| 1uem_A | 117 | KIAA1568 protein; immunoglobulin-like beta-sandwic | 96.28 | |
| 2ee3_A | 108 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 96.28 | |
| 2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative d | 96.25 | |
| 1i1r_A | 303 | GP130, interleukin-6 receptor beta chain; cytokine | 96.24 | |
| 2cui_A | 112 | Tenascin-X; fibronectin type III domain, extracell | 96.24 | |
| 2dbj_A | 124 | Proto-oncogene tyrosine-protein kinase MER precurs | 96.23 | |
| 1uey_A | 127 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 96.22 | |
| 3teu_A | 98 | Fibcon; FN3 domain, fibronectin TPYE III domain, c | 96.22 | |
| 2yuw_A | 110 | Myosin binding protein C, SLOW type; fibronectin I | 96.21 | |
| 2cum_A | 105 | Tenascin-X; hexabrachion-like, fibronectin type II | 96.17 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 96.17 | |
| 1wf5_A | 121 | Sidekick 2 protein; FNIII domain, structural genom | 96.14 | |
| 2dn7_A | 107 | Receptor-type tyrosine-protein phosphatase F; LAR | 96.13 | |
| 2ic2_A | 115 | CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin t | 96.11 | |
| 4h1s_A | 530 | 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo | 96.07 | |
| 3jyf_A | 339 | 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- n | 96.04 | |
| 2yrz_A | 118 | Integrin beta-4; GP150, CD104 antigen, structural | 96.0 | |
| 2yux_A | 120 | Myosin-binding protein C, SLOW-type; fibronectin I | 95.98 | |
| 3k2m_C | 101 | Monobody HA4; engineered binding protein, antibody | 95.97 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 95.95 | |
| 3n06_B | 210 | PRL-R, prolactin receptor; PH dependence, hematopo | 95.94 | |
| 2dfj_A | 280 | Diadenosinetetraphosphatase; helices and strands m | 95.93 | |
| 3qht_C | 97 | Monobody YSMB-1; fibronectin type III, yeast small | 95.92 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 95.89 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 95.84 | |
| 3qwq_B | 114 | Adnectin; cell surface receptor, tyrosine kinase, | 95.8 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 95.79 | |
| 1ujt_A | 120 | KIAA1568 protein; fibronectin type III domain, str | 95.79 | |
| 2ocf_D | 121 | Fibronectin; estrogen receptor, LBD, monobody, est | 95.78 | |
| 1j8k_A | 94 | Fibronectin; EDA, TYPEIII domain, protein binding; | 95.77 | |
| 1x5y_A | 111 | Myosin binding protein C, fast-type; fast MYBP-C, | 95.76 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 95.74 | |
| 3fl7_A | 536 | Ephrin receptor; ATP-binding, kinase, nucleotide-b | 95.73 | |
| 1cd9_B | 215 | G-CSF-R, protein (G-CSF receptor); class1 cytokine | 95.65 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 95.6 | |
| 3t04_D | 103 | Monobody 7C12; engineered binding protein, antibod | 95.56 | |
| 3tes_A | 98 | Tencon; fibronectin type III domain, FN3, consensu | 95.56 | |
| 3up1_A | 223 | Interleukin-7 receptor subunit alpha; cytokine rec | 95.53 | |
| 3mtr_A | 215 | N-CAM-1, NCAM-1, neural cell adhesion molecule 1; | 95.53 | |
| 3mpc_A | 103 | FN3-like protein; fibronectin, FN(III), unknown fu | 95.47 | |
| 1bpv_A | 112 | Titin, A71, connectin; fibronectin type III; NMR { | 95.37 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 95.37 | |
| 2ie4_C | 309 | PP2A-alpha;, serine/threonine-protein phosphatase | 95.36 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 95.32 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 95.3 | |
| 2qbw_A | 195 | PDZ-fibronectin fusion protein; fibronectin PDZ, u | 95.21 | |
| 2z72_A | 342 | Protein-tyrosine-phosphatase; cold-active enzyme, | 95.2 | |
| 2d9q_B | 313 | Granulocyte colony-stimulating factor receptor; cy | 95.1 | |
| 1wfn_A | 119 | Sidekick 2; FN3, cell adhesion, structural genomic | 95.07 | |
| 2jll_A | 389 | NCAM2, neural cell adhesion molecule 2; immunoglob | 95.02 | |
| 2b5i_B | 214 | Interleukin-2 receptor beta chain; four-helix bund | 94.84 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 94.82 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 94.81 | |
| 1fjm_A | 330 | Protein serine/threonine phosphatase-1 (alpha ISO | 94.78 | |
| 2edb_A | 116 | Netrin receptor DCC; tumor suppressor protein DCC, | 94.74 | |
| 3l5i_A | 290 | Interleukin-6 receptor subunit beta; cytokine rece | 94.72 | |
| 1wj3_A | 117 | KIAA1496 protein; beta sandwich, PANG, structural | 94.7 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 94.7 | |
| 1x5i_A | 126 | Neogenin; RGM binding, fibronectin type III domain | 94.68 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 94.62 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 94.6 | |
| 2ha1_A | 201 | Fibronectin; beta sandwich, protein-protein comple | 94.59 | |
| 3h63_A | 315 | Serine/threonine-protein phosphatase 5; metalloenz | 94.52 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 94.51 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 94.42 | |
| 3e7a_A | 299 | PP-1A, serine/threonine-protein phosphatase PP1-al | 94.39 | |
| 1eer_B | 227 | Epobp, erythropoietin receptor; signal transductio | 94.29 | |
| 3icf_A | 335 | PPT, serine/threonine-protein phosphatase T; IRO m | 94.28 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 94.2 | |
| 1axi_B | 236 | HGHBP, growth hormone receptor; complex (hormone-r | 94.18 | |
| 1oww_A | 98 | FN, fibronectin first type III module, CIG; fibron | 94.17 | |
| 3ll8_A | 357 | Serine/threonine-protein phosphatase 2B catalytic | 94.05 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 93.95 | |
| 1n26_A | 325 | IL-6 receptor alpha chain; transmembrane, glycopro | 93.94 | |
| 2w1n_A | 238 | O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrol | 93.7 | |
| 2ekj_A | 105 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 93.68 | |
| 1aui_A | 521 | Calcineurin, serine/threonine phosphatase 2B; hydr | 93.68 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 93.65 | |
| 2h41_A | 95 | Fibronectin; beta sandwich, cell adhesion, structu | 93.55 | |
| 1zlg_A | 680 | Anosmin 1; insulin-like growth factor receptor Cys | 92.69 | |
| 3s98_A | 306 | Interferon alpha/beta receptor 1; human, type I in | 92.41 | |
| 2q7n_A | 488 | Leukemia inhibitory factor receptor; cytokine cell | 92.32 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 92.21 | |
| 3tgx_A | 219 | Interleukin-21 receptor; class I cytokine, class I | 92.15 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 91.98 | |
| 3l5h_A | 589 | Interleukin-6 receptor subunit beta; IG-like, FNII | 91.75 | |
| 3e0j_A | 476 | DNA polymerase subunit delta-2; DNA polymerase del | 91.72 | |
| 2uvf_A | 608 | Exopolygalacturonase; GH28, pectin, cell WALL, hyd | 91.61 | |
| 2jll_A | 389 | NCAM2, neural cell adhesion molecule 2; immunoglob | 91.58 | |
| 3lqm_A | 201 | Interleukin-10 receptor subunit beta; IL-10R2, com | 91.55 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 91.3 | |
| 3fl7_A | 536 | Ephrin receptor; ATP-binding, kinase, nucleotide-b | 91.13 | |
| 3se4_A | 414 | Interferon alpha/beta receptor 1; type I interfero | 90.67 | |
| 3csg_A | 461 | MBP, maltose-binding protein monobody YS1 fusion, | 90.54 | |
| 1iar_B | 207 | Protein (interleukin-4 receptor alpha chain); cyto | 90.46 | |
| 3bpo_C | 314 | Interleukin-13 receptor alpha-1 chain; IL4, IL13, | 90.02 | |
| 3l5i_A | 290 | Interleukin-6 receptor subunit beta; cytokine rece | 89.42 | |
| 2b5i_C | 199 | Cytokine receptor common gamma chain; four-helix b | 89.07 | |
| 3e0g_A | 483 | Leukemia inhibitory factor receptor; IG domain, cy | 89.03 | |
| 2erj_C | 247 | Cytokine receptor common gamma chain; immune syste | 88.89 | |
| 3v6o_A | 206 | Leptin receptor; receptor-antibody complex, cytoki | 88.63 | |
| 4doh_R | 221 | Interleukin-20 receptor subunit alpha; IL10 family | 88.21 | |
| 2gys_A | 419 | Cytokine receptor common beta chain; dimer of inte | 88.2 | |
| 1zlg_A | 680 | Anosmin 1; insulin-like growth factor receptor Cys | 88.05 | |
| 2ha1_A | 201 | Fibronectin; beta sandwich, protein-protein comple | 87.44 | |
| 4go6_B | 232 | HCF C-terminal chain 1; tandem fibronectin repeat, | 85.93 | |
| 3b4n_A | 344 | Endo-pectate lyase; pectin, galacturonic acid, rig | 85.19 | |
| 2v5y_A | 731 | Receptor-type tyrosine-protein phosphatase MU; mem | 85.01 | |
| 4doh_B | 206 | Interleukin-20 receptor subunit beta; IL10 family | 82.86 | |
| 1bqu_A | 215 | Protein (GP130); cytokine receptor, glycoprotein 1 | 82.53 | |
| 2nzi_A | 305 | Titin; IG-domain, FNIII-domain, transferase; 2.90A | 82.52 | |
| 2dtg_E | 897 | Insulin receptor; IR ectodomain, X-RAY crystallogr | 82.24 | |
| 4go6_B | 232 | HCF C-terminal chain 1; tandem fibronectin repeat, | 80.66 | |
| 1q38_A | 89 | Fibronectin; amyloid fibril, anastellin, extracell | 80.46 |
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-79 Score=633.37 Aligned_cols=408 Identities=56% Similarity=1.005 Sum_probs=361.1
Q ss_pred cCcCCCCcccccCCCCCCCceEEEeeecCCCCcEEEEEEcCCCCCCcEEEEeecCCCCceEEEeEEEEeeeeccccceEE
Q 012311 41 IDIPLDNEAFAVPKGHNSPQQVHITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIH 120 (466)
Q Consensus 41 ~~~p~~~~~~~~~~~~~~P~qv~lt~~~~~~~~~~V~W~t~~~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h 120 (466)
.|||+++++|++|+++++|+||||+++++++++|+|+|.|.+.++.+.|+||++++.+..++.|++++|++.++.++++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~P~~v~l~~~~~~~~~~~v~W~t~~~~~~~~V~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 80 (424)
T 2qfp_A 1 RDMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIH 80 (424)
T ss_dssp CBCCTTSGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSSCCCCCEEEEESSSCCCEEECCEEECCBCSSCBCCEEE
T ss_pred CCCCCCCCcccCCCCCCCCceEEEEecCCCCCeEEEEEECCCCCCCCEEEEEeCCCCCceEEEEEEEEEEecCCCCCEEE
Confidence 38999999999999999999999999988789999999998777889999999998888999999888876667889999
Q ss_pred EEEecCCCCCCEEEEEeccCCccceEEEECCCCCCCCCCeEEEEEccCCCCCCcHHHHHHHHHh--CCCEEEEccccccc
Q 012311 121 QCLVDGLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYMES--GAQTVLFLGDLSYA 198 (466)
Q Consensus 121 ~v~l~gL~P~T~Y~Yrv~~~~~s~~~~F~T~p~~g~~~~~~f~v~GD~g~~~~~~~tl~~~~~~--~~dfvl~~GDl~Y~ 198 (466)
+|+|+||+|||+|+|||+.+++|++++|+|+|.+++..++||+++||+|.......+++++.+. ++||||++||++|+
T Consensus 81 ~v~l~gL~p~t~Y~Yrv~~~~~s~~~~f~T~p~~~~~~~~~f~~igD~~~~~~~~~~l~~~~~~~~~~D~vl~~GDl~y~ 160 (424)
T 2qfp_A 81 HTTIRKLKYNTKYYYEVGLRNTTRRFSFITPPQTGLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYA 160 (424)
T ss_dssp EEEECSCCTTCEEEEEECCSSSCEEEEEECCCCCCTTCCEEEEEECSCTTBHHHHHHHHHHHTCSSCCCEEEECSCCSCG
T ss_pred EEEECCCCCCCEEEEEECCCCccceEEEECCCCCCCCCCeEEEEEEeCCCCCChHHHHHHHHhCCCCCCEEEEcCccccc
Confidence 9999999999999999999888999999999988777899999999999876556678888776 89999999999998
Q ss_pred ccccccccchhHHHHHHHHHHHhhcCCeEEcCCCceeeccCcCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEE
Q 012311 199 DRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHI 278 (466)
Q Consensus 199 ~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~f 278 (466)
++....+ +.+|+.|.++++++.+.+|+|+++||||+.+.+..++..+|.+|..+|.||.++.....+.||+|++|++||
T Consensus 161 ~~~~~~~-~~~~~~~~~~l~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~~ 239 (424)
T 2qfp_A 161 DRYPNHD-NVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHI 239 (424)
T ss_dssp GGSGGGC-THHHHHHHHHHHHHHTTSCEEECCCHHHHCCBGGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEE
T ss_pred ccccccc-chHHHHHHHHHHHHHhcCCeEeecCCcccccCCcccccccchhhhhhccCCccccCCCCCcEEEEEECCEEE
Confidence 7754433 578999999999998899999999999997654444444678888999999876666678999999999999
Q ss_pred EEEcCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEeccccee
Q 012311 279 IVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYNI 358 (466)
Q Consensus 279 I~Lds~~~~~~~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~ 358 (466)
|+||++..++.+.+|++||+++|+++++++++|+||++|+|+|++...|+.++..+|+.|+++|.+++||++++||.|.+
T Consensus 240 i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y 319 (424)
T 2qfp_A 240 IVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAY 319 (424)
T ss_dssp EECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSE
T ss_pred EEecCCccCCCcHHHHHHHHHHHhhhcccCCCEEEEEeCcCceecCcccccccHHHHHHHHHHHHHhCCcEEEECChhhh
Confidence 99999988777789999999999998777889999999999998766566677889999999999999999999998852
Q ss_pred -------------cCCcccccCCCCCcEEEEeCCCCCCCCCCCCCCCCCCCccceeeCcccEEEEEEecCCeEEEEEEEc
Q 012311 359 -------------SSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRN 425 (466)
Q Consensus 359 -------------~~~~~~~~~~~~g~vyiv~G~gG~~~~~~~~~~~~~p~~sa~~~~~~G~~~l~v~n~t~l~~~~~~~ 425 (466)
.++.|.++.+++|++||++|+||+.+++...+..++|+|++|++.+|||++|+|.|+|++.|+|+++
T Consensus 320 ~r~~~~~~~~~~~~~g~~~~~~~~~~~vyi~~G~gg~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~ 399 (424)
T 2qfp_A 320 ERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRN 399 (424)
T ss_dssp EEECSEECCCCCSSSCCCSCEECTTSCEEEEECCSCTTSCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEET
T ss_pred heeccccCcceeccCCccccccCCCCcEEEEecCCCCccccCccCCCCCCCcceEEecCCCEEEEEEEcCcEEEEEEEEC
Confidence 2345655567889999999999999887656777899999999999999999999999999999999
Q ss_pred CCCceeeeeeEEEEecccCChhhh
Q 012311 426 DDGKKVATDSFILHNQYWASNRRR 449 (466)
Q Consensus 426 ~dg~~~~~D~~~i~k~~~~~~~~~ 449 (466)
+||++++.|+|||.|++|.|.+++
T Consensus 400 ~~g~~~~~D~~~i~~~~~~~~~~~ 423 (424)
T 2qfp_A 400 QDGVAVEADSVWFFNRHWYPVDDS 423 (424)
T ss_dssp TSCTTCCSEEEEEECTTTCCCCCC
T ss_pred CCCCEEeeeEEEEEeccccccccC
Confidence 999987799999999999997764
|
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-78 Score=632.29 Aligned_cols=406 Identities=60% Similarity=1.106 Sum_probs=358.0
Q ss_pred CccCcCCCCcccccCCCCCCCceEEEeeecCCCCcEEEEEEcC-CCCCCcEEEEeecCCCCceEEEeEEEEeeeeccccc
Q 012311 39 PSIDIPLDNEAFAVPKGHNSPQQVHITQGDYDGKAVIISWVTP-HEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSG 117 (466)
Q Consensus 39 ~~~~~p~~~~~~~~~~~~~~P~qv~lt~~~~~~~~~~V~W~t~-~~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~ 117 (466)
.++|||+++++|++|++.++|+||||+++++++++|+|+|+|. +.++.++|+|+++++.+..++.|+.++|++.++.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (426)
T 1xzw_A 5 EDVDMPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYYNYTSA 84 (426)
T ss_dssp HHHBCCTTCGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSCCTTTTEEEEEETTCCCCEEEECEEECCEETTEECC
T ss_pred ccccCCCCCCcccCCCCCCCCceEEEEECCCCCCeEEEEEEeCCCCCCCCEEEEecCCCCCceEEEEEEEEEEecCCcCC
Confidence 3789999999999999999999999999998789999999999 777889999999998888899999888877667889
Q ss_pred eEEEEEecCCCCCCEEEEEeccCCccceEEEECCCCCCCCCCeEEEEEccCCCCCCcHHHHHHHHHh--CCCEEEEcccc
Q 012311 118 YIHQCLVDGLEYDTKYYYKIGSGDSSREFWFQTPPKIDPDASYKFGIIGDLGQTYNSLSTLEHYMES--GAQTVLFLGDL 195 (466)
Q Consensus 118 ~~h~v~l~gL~P~T~Y~Yrv~~~~~s~~~~F~T~p~~g~~~~~~f~v~GD~g~~~~~~~tl~~~~~~--~~dfvl~~GDl 195 (466)
++|+|+|+||+|||+|+|||+.+.+|++++|+|+|.+++..++||+++||+|.+.....+++++.+. +|||||++||+
T Consensus 85 ~~~~v~l~gL~p~t~Y~Yrv~~g~~s~~~~f~T~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~i~~~~~~~D~vl~~GD~ 164 (426)
T 1xzw_A 85 FIHHCTIKDLEYDTKYYYRLGFGDAKRQFWFVTPPKPGPDVPYVFGLIGDIGQTHDSNTTLTHYEQNSAKGQAVLFMGDL 164 (426)
T ss_dssp EEEEEEECCCCTTCEEEEEECCGGGCEEEEEECCCCCCTTCCEEEEEECSCTTBHHHHHHHHHHHHCTTCCSEEEECSCC
T ss_pred EEEEEEECCCCCCCEEEEEECCCCccceeEEECCCCCCCCCCeEEEEEEeCCCCCchHHHHHHHHhCCCCCCEEEeCCCh
Confidence 9999999999999999999998778999999999987777899999999999875556778888876 89999999999
Q ss_pred cccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCceeeccCcCCcccccccccccccCCCCCCCCCCCceEEEeeCC
Q 012311 196 SYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRAS 275 (466)
Q Consensus 196 ~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~ 275 (466)
+|+++....+ +.+|+.|.+.++++.+.+|+|+++||||+...+..++...|..|..+|.||.++++...+.||+|++|+
T Consensus 165 ~y~~~~~~~~-~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~ 243 (426)
T 1xzw_A 165 SYSNRWPNHD-NNRWDTWGRFSERSVAYQPWIWTAGNHEIDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRAS 243 (426)
T ss_dssp CCGGGSGGGC-THHHHHHHHHHHHHHTTSCEECCCCGGGCCCBGGGTBCSTTHHHHHHSCCCCGGGTCSSTTSEEEEETT
T ss_pred hhcccCCccc-chHHHHHHHHHHHHHhcCCEEEeccccccccCCccccccCChhheEEEeCCcccCCCCCCCeEEEEECC
Confidence 9987754333 578999999999998899999999999997654333344678899999999876666778999999999
Q ss_pred EEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEeccc
Q 012311 276 AHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLH 355 (466)
Q Consensus 276 v~fI~Lds~~~~~~~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~ 355 (466)
+|||+||++.+++.+.+|++||+++|++++|++++|+||++|+|+|++...|+++++.+|+.|+++|.+|+||++++||.
T Consensus 244 ~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~ 323 (426)
T 1xzw_A 244 AHIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGHV 323 (426)
T ss_dssp EEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSS
T ss_pred EEEEEeeCcccCCCCHHHHHHHHHHHHhhhhcCCCEEEEEeccCceeCCCcccCCCHHHHHHHHHHHHHhCCCEEEEcCh
Confidence 99999999988888899999999999998878899999999999998776666777889999999999999999999998
Q ss_pred cee------c-------CCcccccCCCCCcEEEEeCCCCCCCCCCCCCCCCCCCccceeeCcccEEEEEEecCCeEEEEE
Q 012311 356 YNI------S-------SGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHW 422 (466)
Q Consensus 356 ~~~------~-------~~~~~~~~~~~g~vyiv~G~gG~~~~~~~~~~~~~p~~sa~~~~~~G~~~l~v~n~t~l~~~~ 422 (466)
|.. . +|.|.++.+++|++||++|+||+.+++...+.+++|+|++|++.+|||++|+|.|++++.|+|
T Consensus 324 H~~~r~~p~~~~~~~~~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~ 403 (426)
T 1xzw_A 324 HSYERSERVSNVAYNIVNAKCTPVSDESAPVYITIGDGGNSEGLASEMTQPQPSYSAFREASFGHGIFDIKNRTHAHFSW 403 (426)
T ss_dssp SSEEEECSEECCCCCSTTCCCCCEECTTSCEEEEECCSCCTTCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEE
T ss_pred hhheeeeeecCccccccCCccccccCCCccEEEEeCCCccccccccccCCCCCCceeEEecCCCeEEEEEEcCCeEEEEE
Confidence 752 1 233555567899999999999999876656767899999999999999999999999999999
Q ss_pred EEcCCCceeeeeeEEEEecccCC
Q 012311 423 NRNDDGKKVATDSFILHNQYWAS 445 (466)
Q Consensus 423 ~~~~dg~~~~~D~~~i~k~~~~~ 445 (466)
++++||+.++.|+|||.|++|.|
T Consensus 404 ~~~~dg~~~~~D~~~i~~~~~~~ 426 (426)
T 1xzw_A 404 HRNQDGASVEADSLWLLNRYWAS 426 (426)
T ss_dssp EETTSCTTCCSEEEEEECSCC--
T ss_pred EECCCCCEEEeEEEEEEecccCC
Confidence 99999997779999999999875
|
| >2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-40 Score=349.41 Aligned_cols=357 Identities=16% Similarity=0.178 Sum_probs=241.6
Q ss_pred CceEEEeeecCCCCcEEEEEEcCCC---------CCCcEEEEeecCCC--CceEEEeEEEEeeeeccccceEEEEEecCC
Q 012311 59 PQQVHITQGDYDGKAVIISWVTPHE---------PGPSTVSYGTSADK--FDFTAEGTVNNYTFYKYKSGYIHQCLVDGL 127 (466)
Q Consensus 59 P~qv~lt~~~~~~~~~~V~W~t~~~---------~~~~~V~yg~~~~~--~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL 127 (466)
|...-++.|+..++++ |.|.+... .....|+|..+.+. ......|+..+. ...+++|+|+|+||
T Consensus 8 ~f~~GvasGDp~~~~v-ilWtr~~p~~~~~~~~~~~~~~v~~eva~d~~f~~~v~~g~~~a~----~~~~~t~~v~v~gL 82 (527)
T 2yeq_A 8 PFTLGVASGDPLSDSV-VLWTRLAPDPLNGGGMPKQAVPVKWEVAKDEHFRKIVRKGTEMAK----PSLAHSVHVEADGL 82 (527)
T ss_dssp SCTTCEEEECCCSSCE-EEEEECCSBGGGTBCCCSSCEEEEEEEESSTTSSSEEEEEEEEEC----GGGTTEEEEEECSC
T ss_pred CccccccccCCCCCeE-EEEEecCCcccCCCCCCCCceEEEEEEecCCccccceEeeeEEec----CCCceEEEeecCCc
Confidence 5566678887555555 88998642 12456777665544 344556665553 36889999999999
Q ss_pred CCCCEEEEEeccC-CccceEEEECCCCCCCC-CCeEEEEEccCCCCCCcHHHHHHHHHhCCCEEEEcccccccccccc--
Q 012311 128 EYDTKYYYKIGSG-DSSREFWFQTPPKIDPD-ASYKFGIIGDLGQTYNSLSTLEHYMESGAQTVLFLGDLSYADRYQF-- 203 (466)
Q Consensus 128 ~P~T~Y~Yrv~~~-~~s~~~~F~T~p~~g~~-~~~~f~v~GD~g~~~~~~~tl~~~~~~~~dfvl~~GDl~Y~~~~~~-- 203 (466)
+|||+|+|||+.+ .+|++++|||+|++++. .++||+++||.+.......++.++.+.++|||||+||++|+++...
T Consensus 83 ~P~t~Y~Yr~~~~~~~S~~g~frT~P~~~~~~~~~rfa~~sc~~~~~g~~~~~~~ia~~~~D~vlhlGD~iY~d~~~~~~ 162 (527)
T 2yeq_A 83 EPNKVYYYRFKTGHELSPVGKTKTLPAPGANVPQMTFAFASCQQYEHGYYTAYKHMAKEKLDLVFHLGDYIYEYGPNEYV 162 (527)
T ss_dssp CTTCEEEEEEEETTEECCCEEEECCCCTTCCCCCEEEEEECCCCGGGCCCHHHHHHTTSCCSEEEECSCSSCCCCTTSSC
T ss_pred CCCCEEEEEEEeCCCcCCCceEEcCCCCCCCCCCeEEEEEecCCCCCCccHHHHHHHhcCCCEEEecCCcccCCCCCccc
Confidence 9999999999876 46899999999987654 6899999999987555567788888889999999999999987531
Q ss_pred -----------------cccchhHHHHH--HHHHHHhhcCCeEEcCCCceeeccCcCCcc------ccc-----cccccc
Q 012311 204 -----------------IDVGVRWDSWG--RFVERSAAYQPWIWSAGNHEIEYMTYMGEV------VPF-----KSYLHR 253 (466)
Q Consensus 204 -----------------~d~~~~wd~~~--~~~~~l~~~~P~~~~~GNHE~~~~~~~~~~------~~f-----~~y~~r 253 (466)
.++..+|..+. ..++.+.+.+|||+++||||+.++...+.. ..| .+++.+
T Consensus 163 ~~~~~~R~~~~~e~~tl~~yr~~y~~~~~dp~lq~~~a~~P~i~~wDDHE~~nn~~~~~~~~~~~~~~f~~rr~~A~~ay 242 (527)
T 2yeq_A 163 SKTGNVRTHNSAEIITLQDYRNRHAQYRSDANLKAAHAAFPWVVTWDDHEVENNYANKIPEKGQSVEAFVLRRAAAYQAY 242 (527)
T ss_dssp CTTCCCSCCSSSSCCSHHHHHHHHHHHHTCHHHHHHHHHSEEEECCCSTTTSTTCBTTBCSTTCCHHHHHHHHHHHHHHH
T ss_pred ccccccccCCcccccCHHHHHHHHHHHhCCHHHHHHHhcCCEEEecccccccCCCCCCcccccCCcccHHHHHHHHHHHH
Confidence 01122333332 346778889999999999999865221100 011 234444
Q ss_pred c-cCCCCCC----CCCCCceEEEeeCC-EEEEEEcCCCCC----------------------CCChHHHHHHHHHHhhcc
Q 012311 254 Y-PTPHLAS----KSSSPLWYAIRRAS-AHIIVLSSYSPF----------------------VKYTPQWEWLREELKKVD 305 (466)
Q Consensus 254 f-~~P~~~~----~~~~~~yYsf~~g~-v~fI~Lds~~~~----------------------~~~~~Q~~WL~~~L~~~~ 305 (466)
| .||.... +.....||+|++|+ ++|||||++... ..+.+|++||+++|++
T Consensus 243 ~e~~P~~~~~~p~~~~~~~y~sf~~G~lv~~i~LDtR~yr~~~~~~~~~~~~~~~~~~~~~~~lG~~Q~~WL~~~L~~-- 320 (527)
T 2yeq_A 243 YEHMPLRISSLPNGPDMQLYRHFTYGNLASFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQWLFNNLGS-- 320 (527)
T ss_dssp HHHSCCCGGGCCBTTBCCCCEEEEETTTEEEEECCSSSSCCCCGGGSSEECCCHHHHCTTCCSSCHHHHHHHHHHHHH--
T ss_pred HHhCCCCcccCCCCCCceEEEEEEcCCcceEEEEeccccccccccccccccccccccCCcccccCHHHHHHHHHHHhc--
Confidence 4 3565421 23457899999999 999999996411 1368999999999998
Q ss_pred CCCCCeEEEEeccccccCCCc----------ccccCHHHHHHHHHHHHHcCCc--EEEecccceecCCccc-ccCCCC--
Q 012311 306 REKTPWLIVLMHVPIYNSNEA----------HFMEGESMRAAFESWFVRYKVD--YRISNLHYNISSGDCF-PVPDKS-- 370 (466)
Q Consensus 306 r~~~~w~IV~~H~P~y~s~~~----------h~~~~~~~r~~l~~ll~~y~Vd--~~~~gh~~~~~~~~~~-~~~~~~-- 370 (466)
++++|+||++|+|+++.... ++......|+.|+++|.+++|+ ++++||.|........ ...+++
T Consensus 321 -s~a~W~Iv~s~~p~~~~~~~~g~~~~~~~D~W~g~~~~R~~Ll~~l~~~~v~n~vvLsGDvH~~~~~~~~~~~~~p~~~ 399 (527)
T 2yeq_A 321 -STAHWNVLAQQIFFAKWNFGTSASPIYSMDSWDGYPAQRERVINFIKSKNLNNVVVLTGDVHASWASNLHVDFEKTSSK 399 (527)
T ss_dssp -CCSSEEEEECSSCCSCCCSSCSSSCCEETTSGGGSHHHHHHHHHHHHHTTCCCEEEEECSSSSEEEEEEESSTTCTTSC
T ss_pred -CCCCeEEEEeCCcccccccCCCcccccCccchhccHHHHHHHHHHHHHhCCCCEEEEEcchHHHhHhhccccccCCCCC
Confidence 67899999999999975421 1222356899999999999996 9999998864322211 011222
Q ss_pred --CcEEEEeCC--CCCCCCCCC---CCCCCCCCccceeeCcccEEEEEEecCCeEEEEEEEc
Q 012311 371 --APVYITVGD--GGNQEGLAG---KFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRN 425 (466)
Q Consensus 371 --g~vyiv~G~--gG~~~~~~~---~~~~~~p~~sa~~~~~~G~~~l~v~n~t~l~~~~~~~ 425 (466)
++-++++|- ||....... .+....| ...|.+...||+.|+| +.+.++.+|+..
T Consensus 400 ~~~~ef~~ssi~s~~~g~~~~~~~~~~~~~np-~~~~~~~~~Gy~~v~v-t~~~~~~~~~~v 459 (527)
T 2yeq_A 400 IFGAEFVGTSITSGGNGADKRADTDQILKENP-HIQFFNDYRGYVRCTV-TPHQWKADYRVM 459 (527)
T ss_dssp EEEEEEECCCSSTTCSCBSBCTTHHHHHHHCT-TEEEEEBCEEEEEEEE-ETTEEEEEEEEE
T ss_pred ceEEEEEcCCeeCCCCcccchhhhhhhhhcCC-cceeeeCCCCEEEEEE-eccEEEEEEEEe
Confidence 233332221 111100000 0001233 2346667889999999 556788888753
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=299.00 Aligned_cols=260 Identities=15% Similarity=0.192 Sum_probs=187.6
Q ss_pred CCeEEEEEccCCCCCCcHHH----HHHHHH-hCCCEEEEcccccccccccccccchhHHHHHH-HHHHH--hhcCCeEEc
Q 012311 158 ASYKFGIIGDLGQTYNSLST----LEHYME-SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGR-FVERS--AAYQPWIWS 229 (466)
Q Consensus 158 ~~~~f~v~GD~g~~~~~~~t----l~~~~~-~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~-~~~~l--~~~~P~~~~ 229 (466)
.++||+++||+|.+...+.. +.++.+ .+|||||++||++|. +....+ ..+|.+.++ .++.+ ...+||+++
T Consensus 2 ~~l~f~~igD~g~g~~~q~~va~~m~~~~~~~~pd~vl~~GD~~y~-G~~~~~-d~~~~~~f~~~~~~~~~~~~~P~~~v 79 (342)
T 3tgh_A 2 CQLRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFID-GVKGLN-DPAWKNLYEDVYSEEKGDMYMPFFTV 79 (342)
T ss_dssp CCEEEEECCSCBSCCHHHHHHHHHHHHHHHHTTCCEEEECSCSBTT-CCCSTT-CTHHHHHTTTTSCCGGGTTCSEEEEC
T ss_pred ceEEEEEEecCCCCCchHHHHHHHHHHHHhhcCCCEEEECCCcccC-CCCcCc-cHHHHHHHHHHhhhhhhhhCCCEEEe
Confidence 47999999999986543332 223333 399999999999997 543222 456654333 33322 347999999
Q ss_pred CCCceeeccCcCC----c-------------ccccccccccccCCCCCCCCCCCceEEE----ee---------C----C
Q 012311 230 AGNHEIEYMTYMG----E-------------VVPFKSYLHRYPTPHLASKSSSPLWYAI----RR---------A----S 275 (466)
Q Consensus 230 ~GNHE~~~~~~~~----~-------------~~~f~~y~~rf~~P~~~~~~~~~~yYsf----~~---------g----~ 275 (466)
+||||+..++... . .........||.||. .||+| .. | .
T Consensus 80 lGNHD~~~~~~aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~--------~yY~~~~~f~~~~~~~~~~~g~~~~~ 151 (342)
T 3tgh_A 80 LGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPKWIMPN--------YWYHYFTHFTVSSGPSIVKTGHKDLA 151 (342)
T ss_dssp CCHHHHTSCHHHHHHHHHC---------------CCCSSCEEECSS--------SSEEEEEEEEEC---------CEEEE
T ss_pred CCCCccCCCchHhhhhhhcccccccccccccccccccCCCCccCCc--------ceEEEEEEeeccccccccccCCCCce
Confidence 9999986432100 0 000122457888984 68875 32 3 4
Q ss_pred EEEEEEcCCCCCC----------CChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHHc
Q 012311 276 AHIIVLSSYSPFV----------KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRY 345 (466)
Q Consensus 276 v~fI~Lds~~~~~----------~~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y 345 (466)
|+||+|||..... ...+|++||+++|++ ++|+||++|+|+|+++. | .+...+++.|++||.+|
T Consensus 152 v~fi~LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~~-----~~~~IV~~HhP~~~~~~-~-~~~~~l~~~l~~ll~~~ 224 (342)
T 3tgh_A 152 AAFIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKKI-----ADFIIVVGDQPIYSSGY-S-RGSSYLAYYLLPLLKDA 224 (342)
T ss_dssp EEEEECCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHHH-----CSEEEEECSSCSSCSST-T-CCCHHHHHHTHHHHHHT
T ss_pred EEEEEEeCcccccCCcccccchHHHHHHHHHHHHhhcc-----CCcEEEEECCCCCCCCC-C-CCcHHHHHHHHHHHHHc
Confidence 9999999964211 135899999999943 58999999999999764 3 34567899999999999
Q ss_pred CCcEEEecccceecCCcccccCCCCCcEEEEeCCCCCCCCCCCCCCCCCCCccceeeCcccEEEEEEecCCeEEEEEEEc
Q 012311 346 KVDYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRN 425 (466)
Q Consensus 346 ~Vd~~~~gh~~~~~~~~~~~~~~~~g~vyiv~G~gG~~~~~~~~~~~~~p~~sa~~~~~~G~~~l~v~n~t~l~~~~~~~ 425 (466)
+||++++||.|.+... ..+|+.||++|+||..... .. ..++|++|+...+||++++| +++.++++++.+
T Consensus 225 ~VdlvlsGH~H~~~~~------~~~g~~~iv~Ga~g~~~~~--~~--~~~~~s~f~~~~~Gf~~l~v-~~~~l~~~~~~~ 293 (342)
T 3tgh_A 225 EVDLYISGHDNNMEVI------EDNDMAHITCGSGSMSQGK--SG--MKNSKSLFFSSDIGFCVHEL-SNNGIVTKFVSS 293 (342)
T ss_dssp TCCEEEECSSSSEEEE------EETTEEEEEECCSSCCCCC--CS--SCCTTEEEEECSSEEEEEEE-ETTEEEEEEEET
T ss_pred CCCEEEECCCcceeEE------eeCCcEEEEeCcccccccc--CC--CCCCcceeecCCCcEEEEEE-ECCEEEEEEEEC
Confidence 9999999999865432 2357999999999886531 11 24568999999999999999 567899999976
Q ss_pred CCCceeeeeeEEEEecccCChh
Q 012311 426 DDGKKVATDSFILHNQYWASNR 447 (466)
Q Consensus 426 ~dg~~~~~D~~~i~k~~~~~~~ 447 (466)
.+|++ .|+++|.|+--.+.+
T Consensus 294 ~~G~v--ld~~~i~k~~~~~~~ 313 (342)
T 3tgh_A 294 KKGEV--IYTHKLNIKKKKTLD 313 (342)
T ss_dssp TTTEE--EEEEEEECCCCSSCC
T ss_pred CCCcE--EEEEEEECCCCcccc
Confidence 89996 899999998655433
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-30 Score=256.37 Aligned_cols=257 Identities=20% Similarity=0.262 Sum_probs=175.2
Q ss_pred CCeEEEEEccCCCCCCc----------HHHHHHHH-HhCCCEEEEcccccccccccccccchhHHHHHHHHHHHh----h
Q 012311 158 ASYKFGIIGDLGQTYNS----------LSTLEHYM-ESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSA----A 222 (466)
Q Consensus 158 ~~~~f~v~GD~g~~~~~----------~~tl~~~~-~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~----~ 222 (466)
.++||+++||+|..... ...+.++. +.+|||||++||++|.++..... ..+ |.+.++.+. .
T Consensus 5 ~~~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~-~~~---~~~~~~~~~~~~~l 80 (313)
T 1ute_A 5 PILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAK-DKR---FQETFEDVFSDPSL 80 (313)
T ss_dssp CCEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTT-CTH---HHHHTTTTSCSGGG
T ss_pred CceEEEEEcccCCCCCccccCchHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcc-hHH---HHHHHHHHcCchhh
Confidence 58999999999986421 12233323 34999999999999986643221 223 333333321 2
Q ss_pred -cCCeEEcCCCceeeccCcCCcccccccccccccCCCCCCCCCCCceEEEee------CCEEEEEEcCCCC---------
Q 012311 223 -YQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRR------ASAHIIVLSSYSP--------- 286 (466)
Q Consensus 223 -~~P~~~~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~------g~v~fI~Lds~~~--------- 286 (466)
.+|+++++||||...+. .....|.....+|.+| ..||+|++ ++++||+||+...
T Consensus 81 ~~~p~~~v~GNHD~~~~~--~~~~~~~~~~~~~~~~--------~~~y~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~ 150 (313)
T 1ute_A 81 RNVPWHVLAGNHDHLGNV--SAQIAYSKISKRWNFP--------SPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVS 150 (313)
T ss_dssp TTCCEEECCCHHHHHSCH--HHHHHGGGTSTTEECC--------SSSEEEEEECTTSSCEEEEEECCHHHHHCCGGGSTT
T ss_pred cCCCEEEECCCCccCCCc--cccccccccCCCccCc--------ccceEEEEecCCCCceEEEEEEEChHHhCcCccccc
Confidence 68999999999985321 1111122223456565 46899988 5899999998530
Q ss_pred ---CC-----CChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEeccccee
Q 012311 287 ---FV-----KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYNI 358 (466)
Q Consensus 287 ---~~-----~~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~ 358 (466)
.+ ...+|++||+++|++. ..+|+||++|+|+++... +. ....+++.|.++|.+++|+++++||.|..
T Consensus 151 ~~~~~~~~~~~~~~q~~wL~~~L~~~---~~~~~iv~~H~p~~~~~~-~~-~~~~~~~~l~~~l~~~~v~~~l~GH~H~~ 225 (313)
T 1ute_A 151 QQPERPRNLALARTQLAWIKKQLAAA---KEDYVLVAGHYPVWSIAE-HG-PTHCLVKQLLPLLTTHKVTAYLCGHDHNL 225 (313)
T ss_dssp CSCCSCSCHHHHHHHHHHHHHHHHHC---CCSEEEEECSSCSSCCSS-SC-CCHHHHHHTHHHHHHTTCSEEEECSSSSE
T ss_pred cccCCccccchHHHHHHHHHHHHHhC---CCCeEEEEECCCCccCCC-CC-CcHHHHHHHHHHHHHcCCcEEEECChhhh
Confidence 01 2478999999999984 458999999999998654 22 24567889999999999999999999843
Q ss_pred cCCcccccCCCCCcEEEEeCCCCCCCCCCCCCCCCCCCccceeeC----cccEEEEEEecCCeEEEEEEEcCCCceeeee
Q 012311 359 SSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREA----SYGHSTLEIKNRTHAFYHWNRNDDGKKVATD 434 (466)
Q Consensus 359 ~~~~~~~~~~~~g~vyiv~G~gG~~~~~~~~~~~~~p~~sa~~~~----~~G~~~l~v~n~t~l~~~~~~~~dg~~~~~D 434 (466)
... ...+|+.||++|++|.............+.+..|... ..||++|+| +++.+.++++. .+|++ +|
T Consensus 226 ~~~-----~~~~g~~~i~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gy~~l~v-~~~~~~~~~~~-~~g~~--~~ 296 (313)
T 1ute_A 226 QYL-----QDENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEI-TPKEMSVTYIE-ASGKS--LF 296 (313)
T ss_dssp EEE-----ECTTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSCCEEEEEEE-CSSCEEEEEEE-TTSCE--EE
T ss_pred hhc-----cCCCCceEEEECCCcCcCccccccccCCCcccceeccCcCCCCceEEEEE-EcCEEEEEEEc-CCCcE--EE
Confidence 211 1346899999999986532111000011234555443 379999999 45679999986 58885 89
Q ss_pred eEEEEecc
Q 012311 435 SFILHNQY 442 (466)
Q Consensus 435 ~~~i~k~~ 442 (466)
+++|.|+-
T Consensus 297 ~~~l~~~~ 304 (313)
T 1ute_A 297 KTKLPRRA 304 (313)
T ss_dssp EEEECCCC
T ss_pred EEEecccc
Confidence 99998863
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A | Back alignment and structure |
|---|
Probab=99.87 E-value=4.2e-21 Score=190.96 Aligned_cols=237 Identities=18% Similarity=0.110 Sum_probs=156.4
Q ss_pred CCCeEEEEEccCCCCCC---------cHH----HHHHHHH--hCCCEEEEcccccccccccccccchhHHHHHHHHHHHh
Q 012311 157 DASYKFGIIGDLGQTYN---------SLS----TLEHYME--SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSA 221 (466)
Q Consensus 157 ~~~~~f~v~GD~g~~~~---------~~~----tl~~~~~--~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~ 221 (466)
..++||++++|+|.... ... .++.+.+ .++|+||++||+++... ...|..+.+.++++.
T Consensus 23 ~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~~~------~~~~~~~~~~l~~l~ 96 (330)
T 3ib7_A 23 RPDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGE------PAAYRKLRGLVEPFA 96 (330)
T ss_dssp CCSEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTCC------HHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCC------HHHHHHHHHHHHHHH
Confidence 46899999999997431 122 3444555 48999999999996422 345566666777664
Q ss_pred h--cCCeEEcCCCceeeccCcCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCCCC----CCChHHHH
Q 012311 222 A--YQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPF----VKYTPQWE 295 (466)
Q Consensus 222 ~--~~P~~~~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~~----~~~~~Q~~ 295 (466)
. .+|+++++||||.... +...+... .....+.||+|++++++||+||+.... ....+|++
T Consensus 97 ~~~~~pv~~v~GNHD~~~~-----------~~~~~~~~---~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~q~~ 162 (330)
T 3ib7_A 97 AQLGAELVWVMGNHDDRAE-----------LRKFLLDE---APSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLG 162 (330)
T ss_dssp HHHTCEEEECCCTTSCHHH-----------HHHHHHCC---CCCCSCCCEEEEETTEEEEECCCCCTTCCSBCCCHHHHH
T ss_pred hhcCCCEEEeCCCCCCHHH-----------HHHHhccc---ccccCCcceEEEeCCEEEEEecCCCCCCCCCccCHHHHH
Confidence 3 7899999999997421 11111100 011346789999999999999997531 23689999
Q ss_pred HHHHHHhhccCCCCCeEEEEeccccccCCCccc-ccCHHHHHHHHHHHHHcCCcEEEecccceecCCcccccCCCCCcEE
Q 012311 296 WLREELKKVDREKTPWLIVLMHVPIYNSNEAHF-MEGESMRAAFESWFVRYKVDYRISNLHYNISSGDCFPVPDKSAPVY 374 (466)
Q Consensus 296 WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~-~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~~~~~~~~~~~~~g~vy 374 (466)
||+++|++.. ..++|+++|||++....... ......++.|.++|.+++||++++||.|.-.. ...+|+.+
T Consensus 163 wl~~~l~~~~---~~~~iv~~Hh~p~~~~~~~~~~~~~~~~~~l~~~l~~~~v~~v~~GH~H~~~~------~~~~g~~~ 233 (330)
T 3ib7_A 163 WLAEELATPA---PDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTN------ATFVGIPV 233 (330)
T ss_dssp HHHHHTTSCC---TTCEEEECSSCSSCCSSGGGGGGSBSCHHHHHHHHTTSSEEEEEECSSSSCEE------EEETTEEE
T ss_pred HHHHHHHhcc---cCCeEEEEECCCCCCCccccccccccCHHHHHHHHhccCceEEEECCCCCccc------ceECCEEE
Confidence 9999999853 23478889999887543211 11122367889999999999999999985321 12357888
Q ss_pred EEeCCCCCCCCCCCCCCCCCCCccceeeCcccEEEEEEecCCeEEEEEEEcCCC
Q 012311 375 ITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRNDDG 428 (466)
Q Consensus 375 iv~G~gG~~~~~~~~~~~~~p~~sa~~~~~~G~~~l~v~n~t~l~~~~~~~~dg 428 (466)
++.|+.+..... ..+. ..........||..|+|.++ .+.++++.-..+
T Consensus 234 ~~~gs~~~~~~~----~~~~-g~~~~~~~~~gy~iv~i~~~-~~~~~~v~~~~~ 281 (330)
T 3ib7_A 234 SVASATCYTQDL----TVAA-GGTRGRDGAQGCNLVHVYPD-TVVHSVIPLGGG 281 (330)
T ss_dssp EECCCSSCEECT----TSCT-TCCCEESCSCEEEEEEECSS-CEEEEEEECSCC
T ss_pred EecCcceeccCC----CCCC-cceeccCCCCceEEEEEECC-CeEEEEeccCCC
Confidence 888877754221 1111 11122334578999999554 478888864443
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 | Back alignment and structure |
|---|
Probab=99.85 E-value=1.9e-20 Score=184.69 Aligned_cols=227 Identities=19% Similarity=0.161 Sum_probs=146.1
Q ss_pred CCCeEEEEEccCCCCCCc----------------HHHHH----HHHHhCCCEEEEcccccccccccccccchhHHHHHHH
Q 012311 157 DASYKFGIIGDLGQTYNS----------------LSTLE----HYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRF 216 (466)
Q Consensus 157 ~~~~~f~v~GD~g~~~~~----------------~~tl~----~~~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~ 216 (466)
+.++||++++|+|..... ...++ .+.+.+||+||++||+++...... ...++.|...
T Consensus 3 ~~~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~~~~~~~---~~~~~~~~~~ 79 (322)
T 2nxf_A 3 DPVFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRR---DASDRALDTV 79 (322)
T ss_dssp CCSEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHT---TCHHHHHHHH
T ss_pred CCceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccCCCCCcc---hHHHHHHHHH
Confidence 357999999999986521 12233 333458999999999997432110 1224555555
Q ss_pred HHHHhh-cCCeEEcCCCceeeccCcCCccccccccccccc-------------CCCCCCCCCCCceEEEee-CCEEEEEE
Q 012311 217 VERSAA-YQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYP-------------TPHLASKSSSPLWYAIRR-ASAHIIVL 281 (466)
Q Consensus 217 ~~~l~~-~~P~~~~~GNHE~~~~~~~~~~~~f~~y~~rf~-------------~P~~~~~~~~~~yYsf~~-g~v~fI~L 281 (466)
++.+.. .+|+++++||||....+. ..+...|. +|. ....||+|+. ++++||+|
T Consensus 80 ~~~l~~~~~p~~~v~GNHD~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~y~~~~~~~~~~i~l 147 (322)
T 2nxf_A 80 MAELDACSVDVHHVWGNHEFYNFSR-------PSLLSSRLNSAQRTGTDTGSDLIG-----DDIYAYEFSPAPNFRFVLL 147 (322)
T ss_dssp HHHHHTTCSEEEECCCHHHHHHCCH-------HHHHTSTTCCCC------CEECGG-----GTCCCEEEEEETTEEEEEC
T ss_pred HHHHHhcCCcEEEecCCCCcccCCH-------HHHhhhhCCcccccccccccccCC-----CCceEEEEecCCCEEEEEE
Confidence 554432 689999999999842110 11222222 221 2357999998 99999999
Q ss_pred cCCCC----------------------------------------------CCCChHHHHHHHHHHhhccCCCCCeEEEE
Q 012311 282 SSYSP----------------------------------------------FVKYTPQWEWLREELKKVDREKTPWLIVL 315 (466)
Q Consensus 282 ds~~~----------------------------------------------~~~~~~Q~~WL~~~L~~~~r~~~~w~IV~ 315 (466)
|+... -....+|++||+++|+++.+ ...++||+
T Consensus 148 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~-~~~~~iv~ 226 (322)
T 2nxf_A 148 DAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDH-KQERVLIF 226 (322)
T ss_dssp CTTSBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHH-HTCEEEEE
T ss_pred cCceecccccCCCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHh-cCCcEEEE
Confidence 99641 01247899999999998642 23468999
Q ss_pred eccccccCCCcccccCHHHHHHHHHHHHHc-CCcEEEecccceecCCcccccCCCCCcEEEEeCCCCCCCCCCCCCCCCC
Q 012311 316 MHVPIYNSNEAHFMEGESMRAAFESWFVRY-KVDYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQ 394 (466)
Q Consensus 316 ~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y-~Vd~~~~gh~~~~~~~~~~~~~~~~g~vyiv~G~gG~~~~~~~~~~~~~ 394 (466)
+|+|++...... ......++.|.++|.+| +|+++++||.|.... + .+.+|+.|++.|+.- + .
T Consensus 227 ~H~p~~~~~~~~-~~~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~--~---~~~~g~~~i~~~~~~--~---------~ 289 (322)
T 2nxf_A 227 SHLPVHPCAADP-ICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGR--C---TDSSGAQHITLEGVI--E---------T 289 (322)
T ss_dssp ESSCCCTTSSCG-GGSCTTHHHHHHHHHTCTTEEEEEECSCTTCEE--E---ECTTSCEEEECCCGG--G---------C
T ss_pred EccCCCCCCCCc-cccccCHHHHHHHHhcCCCeEEEEcCCcCCCCc--e---eccCCceEEEecchh--h---------C
Confidence 999998765321 11111357889999999 899999999985321 1 124578888776551 1 0
Q ss_pred CCccceeeCcccEEEEEEecCCeEEEEEE
Q 012311 395 PDYSAFREASYGHSTLEIKNRTHAFYHWN 423 (466)
Q Consensus 395 p~~sa~~~~~~G~~~l~v~n~t~l~~~~~ 423 (466)
+ ....||..++|.+ ..+.+..+
T Consensus 290 ~------~~~~~y~~v~~~~-~~~~~~~~ 311 (322)
T 2nxf_A 290 P------PHSHAFATAYLYE-DRMVMKGR 311 (322)
T ss_dssp C------TTSCEEEEEEECS-SEEEEEEE
T ss_pred C------CCCCcEEEEEEEC-CeEEEEec
Confidence 1 1235899999954 45666644
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A | Back alignment and structure |
|---|
Probab=99.84 E-value=5.3e-20 Score=178.01 Aligned_cols=231 Identities=10% Similarity=0.019 Sum_probs=146.4
Q ss_pred eEEEEEccCCCCC---------CcHHHHHH----HHHh--CCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcC
Q 012311 160 YKFGIIGDLGQTY---------NSLSTLEH----YMES--GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQ 224 (466)
Q Consensus 160 ~~f~v~GD~g~~~---------~~~~tl~~----~~~~--~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~ 224 (466)
+||++++|+|... .....++. +.+. ++|+||++||+++... ...|+.+.+.++.+ .+
T Consensus 1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~~~------~~~~~~~~~~l~~l--~~ 72 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGR------PEEYQVARQILGSL--NY 72 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCC------HHHHHHHHHHHTTC--SS
T ss_pred CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCC------HHHHHHHHHHHHhc--CC
Confidence 5899999999864 12233433 3333 5899999999996322 23445555555443 68
Q ss_pred CeEEcCCCceeeccCcCCcccccccccccc-cCCCCCCCCCCCceEEEeeCCEEEEEEcCCCCC----CCChHHHHHHHH
Q 012311 225 PWIWSAGNHEIEYMTYMGEVVPFKSYLHRY-PTPHLASKSSSPLWYAIRRASAHIIVLSSYSPF----VKYTPQWEWLRE 299 (466)
Q Consensus 225 P~~~~~GNHE~~~~~~~~~~~~f~~y~~rf-~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~~----~~~~~Q~~WL~~ 299 (466)
|+++++||||..... . ..+...| ..+.+ ....+|+++.++++||+||+.... ....+|++||++
T Consensus 73 p~~~v~GNHD~~~~~--~-----~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~ld~~~~~~~~~~~~~~~~~wl~~ 141 (274)
T 3d03_A 73 PLYLIPGNHDDKALF--L-----EYLQPLCPQLGSD----ANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEA 141 (274)
T ss_dssp CEEEECCTTSCHHHH--H-----HHHGGGSGGGCSC----GGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHHHH
T ss_pred CEEEECCCCCCHHHH--H-----HHhhhhhcCcccC----CCceEEEEEeCCEEEEEEeCCCCCCCCCeeCHHHHHHHHH
Confidence 999999999975310 0 1111111 11211 024689999999999999996431 236899999999
Q ss_pred HHhhccCCCCCeEEEEeccccccCCCcc-cccCHHHHHHHHHHHHHc-CCcEEEecccceecCCcccccCCCCCcEEEEe
Q 012311 300 ELKKVDREKTPWLIVLMHVPIYNSNEAH-FMEGESMRAAFESWFVRY-KVDYRISNLHYNISSGDCFPVPDKSAPVYITV 377 (466)
Q Consensus 300 ~L~~~~r~~~~w~IV~~H~P~y~s~~~h-~~~~~~~r~~l~~ll~~y-~Vd~~~~gh~~~~~~~~~~~~~~~~g~vyiv~ 377 (466)
+|++. ...++|+++|+|++...... .......++.+.++|.++ +||++++||.|..... ..+|+.+++.
T Consensus 142 ~l~~~---~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~------~~~g~~~~~~ 212 (274)
T 3d03_A 142 QLFEG---GDKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMT------QYRQALISTL 212 (274)
T ss_dssp HHHHH---TTSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEE------EETTEEEEEC
T ss_pred HHHhC---CCCCEEEEECCCCcccCCcccCcccCcCHHHHHHHHHhCCCceEEEeCCCCCchhh------eECCEEEEEc
Confidence 99984 34689999999998754311 001112346788999999 8999999999853211 1245555555
Q ss_pred CCCCCCCCCCCCCCCCCCCc-cceeeCcccEEEEEEecCCeEEEEEEEc
Q 012311 378 GDGGNQEGLAGKFRYPQPDY-SAFREASYGHSTLEIKNRTHAFYHWNRN 425 (466)
Q Consensus 378 G~gG~~~~~~~~~~~~~p~~-sa~~~~~~G~~~l~v~n~t~l~~~~~~~ 425 (466)
++.+..... . .+++ +.+.....||..+++.++ .+.+++++.
T Consensus 213 pg~~~~~~~----~--~~~~~~~~~~~~~gy~i~~i~~~-~~~~~~~~~ 254 (274)
T 3d03_A 213 PGTVHQVPY----C--HADTDPYYDLSPASCLMHRQVGE-QWVSYQHSL 254 (274)
T ss_dssp CCSSCBCCC----C--SSCCSCEEBCCCCEEEEEEEETT-EEEEEEEEC
T ss_pred CCcceeecc----C--CCccccccccCCCceEEEEEeCC-cEEEEEEec
Confidence 443322111 1 1122 234445689999999654 688888764
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.74 E-value=2e-16 Score=164.34 Aligned_cols=193 Identities=11% Similarity=0.118 Sum_probs=122.1
Q ss_pred CCCeEEEEEccCCCCCC-----------------------cHHHHHH----HHHhCCCEEEEcccccccccccccccchh
Q 012311 157 DASYKFGIIGDLGQTYN-----------------------SLSTLEH----YMESGAQTVLFLGDLSYADRYQFIDVGVR 209 (466)
Q Consensus 157 ~~~~~f~v~GD~g~~~~-----------------------~~~tl~~----~~~~~~dfvl~~GDl~Y~~~~~~~d~~~~ 209 (466)
+.++||++++|+|.... ....++. +.+.+||+||++||+++... ...
T Consensus 37 ~~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~------~~~ 110 (443)
T 2xmo_A 37 DRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNNGE------KTS 110 (443)
T ss_dssp CCCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBSSCC------HHH
T ss_pred CCCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCCCCC------HHH
Confidence 46899999999997532 1223333 33458999999999996432 234
Q ss_pred HHHHHHHHHHHhh-cCCeEEcCCCceeeccCcC--Ccc-------cccccccccccCCCC-CC---CCCCCceEEEeeCC
Q 012311 210 WDSWGRFVERSAA-YQPWIWSAGNHEIEYMTYM--GEV-------VPFKSYLHRYPTPHL-AS---KSSSPLWYAIRRAS 275 (466)
Q Consensus 210 wd~~~~~~~~l~~-~~P~~~~~GNHE~~~~~~~--~~~-------~~f~~y~~rf~~P~~-~~---~~~~~~yYsf~~g~ 275 (466)
++.+.+.++.+.. .+|+++++||||....... ... .....|...|..... .. ......|+.+..++
T Consensus 111 ~~~~~~~l~~l~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~ 190 (443)
T 2xmo_A 111 HEELAKKLTQVEKNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSK 190 (443)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTTSSCTTCEEEETTEEEECCCCCHHHHHHHTCCCCCTTCSEECSSSSCEEECSBSS
T ss_pred HHHHHHHHHHHHhCCCeEEEECCcCCCCCccccccCCcccccccccCHHHHHHHhhhcChhhhhccCCCCceEEEecCCC
Confidence 5555666666543 6899999999998532100 000 000122222321100 00 00123455556889
Q ss_pred EEEEEEcCCCCC------------CCChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCccccc--CHHHHHHHHHH
Q 012311 276 AHIIVLSSYSPF------------VKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFME--GESMRAAFESW 341 (466)
Q Consensus 276 v~fI~Lds~~~~------------~~~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~~--~~~~r~~l~~l 341 (466)
++||+||+.... ....+|++||++.|+++.. +...+|+++|+|++..... ..+ ...-++.+.++
T Consensus 191 ~~~i~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~-~~~~~Iv~~H~p~~~~~~~-~~~~~~~~~~~~l~~l 268 (443)
T 2xmo_A 191 VWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKK-NGAKLIPVLHHNLTDHNDV-IQKGYTINYNQQVIDA 268 (443)
T ss_dssp EEEEECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHH-TTCEEEEECSSBSSCSSCC---CCSBCTTHHHHHHH
T ss_pred EEEEEeeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHH-cCCeEEEEECCCCcccccc-cccccccccHHHHHHH
Confidence 999999996421 1357999999999998643 2346899999999875421 111 11235788899
Q ss_pred HHHcCCcEEEecccce
Q 012311 342 FVRYKVDYRISNLHYN 357 (466)
Q Consensus 342 l~~y~Vd~~~~gh~~~ 357 (466)
|.+++|+++++||.|.
T Consensus 269 l~~~~v~lvl~GH~H~ 284 (443)
T 2xmo_A 269 LTEGAMDFSLSGHIHT 284 (443)
T ss_dssp HHHTTCCEEEECSSCS
T ss_pred HHHcCCeEEEECCccc
Confidence 9999999999999984
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.30 E-value=9.4e-12 Score=116.28 Aligned_cols=173 Identities=9% Similarity=-0.006 Sum_probs=97.4
Q ss_pred CeEEEEEccCCCCCCcHHH-HHHHHHhCCCEEEEcccccccccccccccchhHHHHHHHHHHHhh-cCCeEEcCCCceee
Q 012311 159 SYKFGIIGDLGQTYNSLST-LEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAA-YQPWIWSAGNHEIE 236 (466)
Q Consensus 159 ~~~f~v~GD~g~~~~~~~t-l~~~~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~-~~P~~~~~GNHE~~ 236 (466)
++||+++||+|........ ++.+.+.++|+|+++||++..... . +.+.+.++.+.. .+|+++++||||..
T Consensus 5 ~mri~~iSD~H~~~~~~~~~~~~~~~~~~D~vi~~GDl~~~~~~-----~---~~~~~~~~~l~~~~~pv~~v~GNHD~~ 76 (228)
T 1uf3_A 5 VRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPKAAK-----S---RDYAAFFRILSEAHLPTAYVPGPQDAP 76 (228)
T ss_dssp CCEEEEEECCTTCHHHHHHHHTHHHHHTCSEEEEESCSSCTTCC-----H---HHHHHHHHHHGGGCSCEEEECCTTSCS
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCC-----H---HHHHHHHHHHHhcCCcEEEECCCCCch
Confidence 5899999999986433222 223333489999999999953211 1 223334444433 57999999999974
Q ss_pred ccCcCCcccccccccccccCCCCCCCCCCCceEEEeeC-CEEEEEEcCCC--CCCCC--------hHHHHHHHHHHhhcc
Q 012311 237 YMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRA-SAHIIVLSSYS--PFVKY--------TPQWEWLREELKKVD 305 (466)
Q Consensus 237 ~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g-~v~fI~Lds~~--~~~~~--------~~Q~~WL~~~L~~~~ 305 (466)
.. +.. -..+......|... ...+. .+.++ ++.|+.++... ++... ..+.+|+++.|++..
T Consensus 77 ~~----~~~-~~~~~~~~~~~~~~--~l~~~--~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 147 (228)
T 1uf3_A 77 IW----EYL-REAANVELVHPEMR--NVHET--FTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWELK 147 (228)
T ss_dssp HH----HHH-HHHHHHHHHCTTEE--ECBTS--EEEETTTEEEEEECSEEESSSCCBSSSSCEEEHHHHHHHHGGGGGSC
T ss_pred hH----HHH-HhhhhhhccCcceE--Ecccc--eEeeCCCcEEecCCCCcCCCCccChhhcccchhhhHHHHHHHHHhCC
Confidence 31 000 00100000011100 00011 24456 88999987531 11111 223344555555532
Q ss_pred CCCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccc
Q 012311 306 REKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHY 356 (466)
Q Consensus 306 r~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~ 356 (466)
..++|++.|+|++.....+. .. ..+..++.++++|++++||.|
T Consensus 148 ---~~~~il~~H~p~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~GH~H 190 (228)
T 1uf3_A 148 ---DYPKIFLFHTMPYHKGLNEQ-GS----HEVAHLIKTHNPLLVLVAGKG 190 (228)
T ss_dssp ---SCCEEEEESSCBCBTTTBTT-SB----HHHHHHHHHHCCSEEEECCSS
T ss_pred ---CCCeEEEEccCcccCCcccc-CH----HHHHHHHHHhCCCEEEEcccc
Confidence 23689999999986422121 11 256678888999999999998
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.28 E-value=1.4e-11 Score=117.93 Aligned_cols=186 Identities=10% Similarity=0.040 Sum_probs=98.9
Q ss_pred CeEEEEEccCCCCCCcHH-HHHHHHHhCCCEEEEccccccccccccc--------cc--chh--------HHHHHHHHHH
Q 012311 159 SYKFGIIGDLGQTYNSLS-TLEHYMESGAQTVLFLGDLSYADRYQFI--------DV--GVR--------WDSWGRFVER 219 (466)
Q Consensus 159 ~~~f~v~GD~g~~~~~~~-tl~~~~~~~~dfvl~~GDl~Y~~~~~~~--------d~--~~~--------wd~~~~~~~~ 219 (466)
++||++++|+|....... .++.+.+.++|+||++||++........ .+ ... .+.+.++++.
T Consensus 5 ~mri~~iSDlH~~~~~~~~~l~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~ 84 (260)
T 2yvt_A 5 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFFRE 84 (260)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeecCCChHHHHHHHHHHHhcCCCEEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHHHHHHHHHHHHHHH
Confidence 579999999998765433 3444444599999999999953211000 00 000 0223444555
Q ss_pred Hhh-cCCeEEcCCCceeeccCcCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCCCC-CCChHHH---
Q 012311 220 SAA-YQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPF-VKYTPQW--- 294 (466)
Q Consensus 220 l~~-~~P~~~~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~~-~~~~~Q~--- 294 (466)
+.. .+|+++++||||........ ..+...-..|.. ........+.++++.|+.++..... ....+|.
T Consensus 85 l~~~~~pv~~v~GNHD~~~~~~~~-----~~~~~~~~~~~~---~~l~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 156 (260)
T 2yvt_A 85 IGELGVKTFVVPGKNDAPLKIFLR-----AAYEAETAYPNI---RVLHEGFAGWRGEFEVIGFGGLLTEHEFEEDFVLKY 156 (260)
T ss_dssp HHTTCSEEEEECCTTSCCHHHHHH-----HHHHTTTTCTTE---EECSSEEEEETTTEEEEEECSEEESSCCBSSSSCEE
T ss_pred HHhcCCcEEEEcCCCCchhhhhHH-----HHhhhccCCcce---EEecCcceEEECCEEEEecCCCcCCCCcCHHHHhhc
Confidence 543 58999999999975310000 001000000000 0000112377889999999853210 0111222
Q ss_pred ------HHHHHHHhhccCCCCCeEEEEeccccccCCCccc--ccCHHHHHHHHHHHHHcCCcEEEecccc
Q 012311 295 ------EWLREELKKVDREKTPWLIVLMHVPIYNSNEAHF--MEGESMRAAFESWFVRYKVDYRISNLHY 356 (466)
Q Consensus 295 ------~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~--~~~~~~r~~l~~ll~~y~Vd~~~~gh~~ 356 (466)
+|| +.|++. .....|++.|+|++....... .....-...+..++.++++|++++||.|
T Consensus 157 ~~~~~~~~l-~~l~~~---~~~~~Il~~H~pp~~~~~d~~~~~~~~~~~~~l~~~~~~~~~~~vl~GH~H 222 (260)
T 2yvt_A 157 PRWYVEYIL-KFVNEL---KPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVG 222 (260)
T ss_dssp EHHHHHHHG-GGGGGS---CCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSC
T ss_pred chhhHHHHH-HHHHhc---CCCCEEEEECCCccccccccCcccccccCcHHHHHHHHHhCCCEEEECCcc
Confidence 344 334432 223458999999875311000 0000011356678889999999999998
|
| >2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A | Back alignment and structure |
|---|
Probab=99.23 E-value=3e-11 Score=120.82 Aligned_cols=235 Identities=14% Similarity=0.086 Sum_probs=119.3
Q ss_pred CCeEEEEEccCCCC----CC--c-------HHHHHHH----HHhCCCEEEEcccccccccccccccchhHHHHHHHHHHH
Q 012311 158 ASYKFGIIGDLGQT----YN--S-------LSTLEHY----MESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERS 220 (466)
Q Consensus 158 ~~~~f~v~GD~g~~----~~--~-------~~tl~~~----~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l 220 (466)
..+||+.++|+|.+ .. . ...++++ .+.++|+||++||+++..+... ......+.++++.+
T Consensus 17 ~~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~~~~~---~~~~~~~~~~l~~L 93 (336)
T 2q8u_A 17 KELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPS---VVALHDLLDYLKRM 93 (336)
T ss_dssp CEEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCSEEEEESCSBSCSSCCC---HHHHHHHHHHHHHH
T ss_pred CceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCCEEEECCccccCCCCCC---HHHHHHHHHHHHHH
Confidence 57999999999966 21 1 2334443 3459999999999444333221 12234455666666
Q ss_pred hhcCCeEEcCCCceeeccCcCCccccccccccc----ccCCCCCCCCCCCceEEEeeCCEEEEEEcCCCCC-------CC
Q 012311 221 AAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHR----YPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPF-------VK 289 (466)
Q Consensus 221 ~~~~P~~~~~GNHE~~~~~~~~~~~~f~~y~~r----f~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~~-------~~ 289 (466)
...+|+++++||||... . .. +..+... +..-.+.. ....+.++.+++.|+.|+..... ..
T Consensus 94 ~~~~pv~~i~GNHD~~~-~--~~---~~~~l~~~g~nv~v~~~~~---~~~~~~~~~~~v~i~glp~~~~~~~~~~~~~~ 164 (336)
T 2q8u_A 94 MRTAPVVVLPGNHDWKG-L--KL---FGNFVTSISSDITFVMSFE---PVDVEAKRGQKVRILPFPYPDESEALRKNEGD 164 (336)
T ss_dssp HHHSCEEECCC-------C--HH---HHHHHHHHCSSEEECCSSS---CEEEECTTSCEEEEEEECCC-------CCSSH
T ss_pred HhcCCEEEECCCCCccc-c--cc---HHHHHHhcCCEEEEEeccc---ccCceEEeCCCEEEEECCCCCHHHHHHHhhHH
Confidence 43489999999999753 1 10 1111110 11110000 00012233467899998753321 11
Q ss_pred ChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCcccccCHH-H-HHHHHHHHHHcCCcEEEecccceecCCcccccC
Q 012311 290 YTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGES-M-RAAFESWFVRYKVDYRISNLHYNISSGDCFPVP 367 (466)
Q Consensus 290 ~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~~~~~-~-r~~l~~ll~~y~Vd~~~~gh~~~~~~~~~~~~~ 367 (466)
..+|.+|+.+.|+..-+....+.|+++|.|++..... +++. + ...+...+.+.++|++++||.|... .. .
T Consensus 165 ~~~~~~~~~~~l~~~~~~~~~~~Ill~H~~~~~~~~~---~~~~~~~~~~v~~~l~~~~~d~v~~GH~H~~~---~~--~ 236 (336)
T 2q8u_A 165 FRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGY---AGIEQGREIIINRALIPSVVDYAALGHIHSFR---EI--Q 236 (336)
T ss_dssp HHHHHHHHHHHHHHHHHTCSSEEEEEEESEETTCC-----------CCCEECGGGSCTTSSEEEEESCSSCE---EE--E
T ss_pred HHHHHHHHHHHHHHhccCCCCCEEEEECccccCCCCC---CCccchhhcccCHHHccccCCEEEEccccCce---Ee--C
Confidence 3568899998887521023568999999999753221 1110 0 0011122445799999999988421 11 0
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCCCCCCCCccceeeCcccEEEEEEecCCeEEEEEEEcCC
Q 012311 368 DKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRNDD 427 (466)
Q Consensus 368 ~~~g~vyiv~G~gG~~~~~~~~~~~~~p~~sa~~~~~~G~~~l~v~n~t~l~~~~~~~~d 427 (466)
.++..+-.|+. ++. .++.. ...-||..+++.++....++++....
T Consensus 237 --~~~~i~y~GS~---~~~---------s~~e~-~~~~~~~lv~i~~~~~~~v~~i~~~~ 281 (336)
T 2q8u_A 237 --KQPLTIYPGSL---IRI---------DFGEE-ADEKGAVFVELKRGEPPRYERIDASP 281 (336)
T ss_dssp --ETTEEEECCCS---SCC---------SGGGT-TCCCEEEEEEEETTSCCEEEEEECCC
T ss_pred --CCccEEECCCC---cCC---------Ccccc-CCCCEEEEEEEeCCCccEEEEEECCC
Confidence 11222233432 211 11110 12358999999765556788887443
|
| >1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A | Back alignment and structure |
|---|
Probab=99.02 E-value=2.5e-08 Score=91.39 Aligned_cols=180 Identities=12% Similarity=0.077 Sum_probs=107.8
Q ss_pred CCCeEEEEEccCCCCCC---cHHHHHHHHH-hCCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCC
Q 012311 157 DASYKFGIIGDLGQTYN---SLSTLEHYME-SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGN 232 (466)
Q Consensus 157 ~~~~~f~v~GD~g~~~~---~~~tl~~~~~-~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GN 232 (466)
..-+||++++|+|.... ....+..+.+ .++|+|+++||++. ....+.++.+ ..|++.++||
T Consensus 8 ~~mm~i~~iSD~H~~~~~~~~~~~l~~~~~~~~~d~ii~~GDl~~-------------~~~~~~l~~~--~~~~~~v~GN 72 (192)
T 1z2w_A 8 RDRMLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCT-------------KESYDYLKTL--AGDVHIVRGD 72 (192)
T ss_dssp ---CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBS-------------HHHHHHHHHH--CSEEEECCCT
T ss_pred ccceEEEEEecCCCCccchhHHHHHHHHhccCCCCEEEEcCCCCC-------------HHHHHHHHhc--CCCEEEEcCC
Confidence 34479999999997532 2233433332 37999999999982 1122333333 3589999999
Q ss_pred ceeeccCcCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCCCeE
Q 012311 233 HEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWL 312 (466)
Q Consensus 233 HE~~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~~~~~~~Q~~WL~~~L~~~~r~~~~w~ 312 (466)
||... .+| ....++. ..++
T Consensus 73 hD~~~-----------------~lp---------~~~~~~~-----------------------------------~~~~ 91 (192)
T 1z2w_A 73 FDENL-----------------NYP---------EQKVVTV-----------------------------------GQFK 91 (192)
T ss_dssp TCCCT-----------------TSC---------SEEEEEE-----------------------------------TTEE
T ss_pred cCccc-----------------cCC---------cceEEEE-----------------------------------CCEE
Confidence 99641 122 1111111 1357
Q ss_pred EEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccceecCCcccccCCCCCcEEEEeCCCCCCCCCCCCCCC
Q 012311 313 IVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRY 392 (466)
Q Consensus 313 IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~~~~~~~~~~~~~g~vyiv~G~gG~~~~~~~~~~~ 392 (466)
|++.|.+++.... + .+.+..++.+.++|++++||.|.-.. ...+++.+|..|+.+....
T Consensus 92 i~l~Hg~~~~~~~-----~---~~~l~~~~~~~~~d~vi~GHtH~~~~------~~~~~~~~inpGS~~~~~~------- 150 (192)
T 1z2w_A 92 IGLIHGHQVIPWG-----D---MASLALLQRQFDVDILISGHTHKFEA------FEHENKFYINPGSATGAYN------- 150 (192)
T ss_dssp EEEECSCCCCBTT-----C---HHHHHHHHHHHSSSEEECCSSCCCEE------EEETTEEEEECCCTTCCCC-------
T ss_pred EEEECCCcCCCCC-----C---HHHHHHHHHhcCCCEEEECCcCcCcc------EeECCEEEEECCcccccCC-------
Confidence 8888865543211 1 23456677889999999999884221 1235688888887754321
Q ss_pred CCCCccceeeCcccEEEEEEecCCeEEEEEEEcCCCceeeeeeEEEEe
Q 012311 393 PQPDYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGKKVATDSFILHN 440 (466)
Q Consensus 393 ~~p~~sa~~~~~~G~~~l~v~n~t~l~~~~~~~~dg~~~~~D~~~i~k 440 (466)
| .. .....+|+.|++.++ .+.+++++-.+++. ...++.+.|
T Consensus 151 --~-~~--~~~~~~y~il~~~~~-~~~~~~~~~~~~~~-~v~~~~~~~ 191 (192)
T 1z2w_A 151 --A-LE--TNIIPSFVLMDIQAS-TVVTYVYQLIGDDV-KVERIEYKK 191 (192)
T ss_dssp --S-SC--SCCCCEEEEEEEETT-EEEEEEEEEETTEE-EEEEEEEEC
T ss_pred --C-CC--cCCCCcEEEEEEECC-EEEEEEEEccCCEE-EEEEEEEcc
Confidence 1 00 123458999999654 58888887555553 566666654
|
| >2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=98.95 E-value=2.2e-08 Score=93.59 Aligned_cols=187 Identities=14% Similarity=0.168 Sum_probs=108.9
Q ss_pred CeEEEEEccCCCCCCc---HHHHHHHHH-hCCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCce
Q 012311 159 SYKFGIIGDLGQTYNS---LSTLEHYME-SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHE 234 (466)
Q Consensus 159 ~~~f~v~GD~g~~~~~---~~tl~~~~~-~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE 234 (466)
.+|+++++|++..... ...+.++.+ .++|+|+++||++. .+..+.++.+ ..|++.++||||
T Consensus 25 ~m~i~~iSD~H~~~~~~~l~~~l~~~~~~~~~D~vi~~GDl~~-------------~~~l~~l~~~--~~~v~~V~GNHD 89 (215)
T 2a22_A 25 GDLVLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVCS-------------QEYVEMLKNI--TKNVYIVSGDLD 89 (215)
T ss_dssp CEEEEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCCC-------------HHHHHHHHHH--CSCEEECCCTTC
T ss_pred CcEEEEEecCCCCCChHHHHHHHHHHHhcCCCCEEEECCCCCC-------------HHHHHHHHHc--CCCEEEecCCCc
Confidence 5899999999976422 244555543 48999999999982 1223334433 368999999999
Q ss_pred eeccCcCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCCCeEEE
Q 012311 235 IEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIV 314 (466)
Q Consensus 235 ~~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~~~~~~~Q~~WL~~~L~~~~r~~~~w~IV 314 (466)
..... .. ..+.. .+| .... . ....++|+
T Consensus 90 ~~~~~----~~--~~~~~--~lp---------~~~~---------------------------------~--~~~~~~i~ 117 (215)
T 2a22_A 90 SAIFN----PD--PESNG--VFP---------EYVV---------------------------------V--QIGEFKIG 117 (215)
T ss_dssp CSCCB----CC--GGGTB--CCC---------SEEE---------------------------------E--EETTEEEE
T ss_pred Ccccc----cC--hhhHh--hCC---------ceEE---------------------------------E--ecCCeEEE
Confidence 75210 00 00000 000 0000 0 01235788
Q ss_pred EeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccceecCCcccccCCCCCcEEEEeCCCCCCCCCCCCCCCCC
Q 012311 315 LMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQ 394 (466)
Q Consensus 315 ~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~~~~~~~~~~~~~g~vyiv~G~gG~~~~~~~~~~~~~ 394 (466)
+.|.+++.... + .+.+..++.+.++|++++||.|.-.. ...+++.+|..|+.|.... .. +
T Consensus 118 l~Hg~~~~~~~-----~---~~~l~~~~~~~~~d~vl~GHtH~~~~------~~~~~~~~inpGS~~~~~~---~~-~-- 177 (215)
T 2a22_A 118 LMHGNQVLPWD-----D---PGSLEQWQRRLDCDILVTGHTHKLRV------FEKNGKLFLNPGTATGAFS---AL-T-- 177 (215)
T ss_dssp EECSTTSSSTT-----C---HHHHHHHHHHHTCSEEEECSSCCCEE------EEETTEEEEECCCSSCCCC---TT-S--
T ss_pred EEcCCccCCCC-----C---HHHHHHHHhhcCCCEEEECCcCCCcc------EeeCCEEEEECCcccccCC---CC-C--
Confidence 89965543211 1 13556777788999999999884221 1124677888887654321 00 0
Q ss_pred CCccceeeCcccEEEEEEecCCeEEEEEEEcCCCceeeeeeEEEEe
Q 012311 395 PDYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGKKVATDSFILHN 440 (466)
Q Consensus 395 p~~sa~~~~~~G~~~l~v~n~t~l~~~~~~~~dg~~~~~D~~~i~k 440 (466)
.....+|+.|++.+ ..+.+++++-++|+. .+.+..+.|
T Consensus 178 ------~~~~~~y~il~i~~-~~i~~~~~~~~~~~~-~v~~~~~~~ 215 (215)
T 2a22_A 178 ------PDAPPSFMLMALQG-NKVVLYVYDLRDGKT-NVAMSEFSK 215 (215)
T ss_dssp ------TTCCCEEEEEEEET-TEEEEEEEEEETTEE-EEEEEEEEC
T ss_pred ------CCCCCcEEEEEEeC-CcEEEEEEEecCCeE-EEEEEEeeC
Confidence 11235799999965 457888877556654 455555543
|
| >1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A | Back alignment and structure |
|---|
Probab=98.84 E-value=6e-09 Score=99.30 Aligned_cols=186 Identities=9% Similarity=-0.012 Sum_probs=98.3
Q ss_pred eEEEEEccCCCCCCcH-HHHHHHH---Hh--CCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCc
Q 012311 160 YKFGIIGDLGQTYNSL-STLEHYM---ES--GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNH 233 (466)
Q Consensus 160 ~~f~v~GD~g~~~~~~-~tl~~~~---~~--~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNH 233 (466)
.|++++||+|...... ..++.+. +. ++|+++++||++..... . .+..+.+..+....|++.++|||
T Consensus 2 m~i~~isD~H~~~~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g~~-----~---~~~~~~l~~l~~~~~~~~v~GNh 73 (252)
T 1nnw_A 2 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPY-----P---KEVIEVIKDLTKKENVKIIRGKY 73 (252)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSC-----H---HHHHHHHHHHHHHSCEEEECCHH
T ss_pred cEEEEEeecCCCHHHHHHHHHHHHhhhhccCCCCEEEEeCccCCCCCC-----H---HHHHHHHHhhHhhcCeeEEecch
Confidence 4899999999653322 2344444 44 78999999999943211 1 22334444444346899999999
Q ss_pred eeeccCcCCcccccccccccccCCCCCCCCCCCceE-EEeeCCEEEEEEcCCCCC---CCChHHHHHHHHHHhhccCCCC
Q 012311 234 EIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWY-AIRRASAHIIVLSSYSPF---VKYTPQWEWLREELKKVDREKT 309 (466)
Q Consensus 234 E~~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yY-sf~~g~v~fI~Lds~~~~---~~~~~Q~~WL~~~L~~~~r~~~ 309 (466)
|...... ...+. .. .+. .++..... ..+. .+ ....+|++||++........-.
T Consensus 74 D~~~~~~----------~~~~~-~~--------~~~~~~~~~~~~---~~~~-~~~~~~l~~~~~~~L~~lp~~~~~~~~ 130 (252)
T 1nnw_A 74 DQIIAMS----------DPHAT-DP--------GYIDKLELPGHV---KKAL-KFTWEKLGHEGREYLRDLPIYLVDKIG 130 (252)
T ss_dssp HHHHHHS----------CTTCS-SS--------GGGGGSSCCHHH---HHHH-HHHHHHHHHHHHHHHHTSCSCEEEEET
T ss_pred HHHhhcc----------ccccC-Cc--------ccccchhhhHHH---HHHH-HHHHHHCCHHHHHHHHhCCceEEEeeC
Confidence 9753110 00000 00 000 00000000 0000 00 0135788998763322211112
Q ss_pred CeEEEEeccccccCCCcccccCHHHHHHHHHHHHHc-CCcEEEecccceecCCcccccCCCCCcEEEEeCCCCCC
Q 012311 310 PWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRY-KVDYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQ 383 (466)
Q Consensus 310 ~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y-~Vd~~~~gh~~~~~~~~~~~~~~~~g~vyiv~G~gG~~ 383 (466)
...|++.|++++.......... ...+.+..+|.++ +++.+++||.|.-... ..+++++|..|+.|.+
T Consensus 131 ~~~i~~~H~~p~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~vi~GHtH~~~~~------~~~~~~~in~Gs~~~~ 198 (252)
T 1nnw_A 131 GNEVFGVYGSPINPFDGEVLAE-QPTSYYEAIMRPVKDYEMLIVASPMYPVDA------MTRYGRVVCPGSVGFP 198 (252)
T ss_dssp TEEEEEESSCSSCTTTCCCCSS-CCHHHHHHHHGGGTTSSEEEESTTCSEEEE------EETTEEEEEECCSSSC
T ss_pred CcEEEEEcCCCCCCcccccCCC-CCHHHHHHHHhcCCCCCEEEECCccccceE------ecCCeEEEECCCccCC
Confidence 3468888988753221110111 1124667788888 9999999998742111 1246888888887653
|
| >3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* | Back alignment and structure |
|---|
Probab=98.84 E-value=1.8e-08 Score=98.50 Aligned_cols=201 Identities=12% Similarity=0.061 Sum_probs=104.4
Q ss_pred CCeEEEEEccCCCCCCcHHHHHHHHHhCCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCceeec
Q 012311 158 ASYKFGIIGDLGQTYNSLSTLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEY 237 (466)
Q Consensus 158 ~~~~f~v~GD~g~~~~~~~tl~~~~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~~~ 237 (466)
..+||++++|+|...... .+ .++|+||++||++.... ......+.+.++.+ ...|.++++||||...
T Consensus 58 ~~mri~~iSD~H~~~~~l----~i--~~~D~vi~aGDl~~~g~------~~e~~~~~~~L~~l-~~~~v~~V~GNHD~~~ 124 (296)
T 3rl5_A 58 GHTRFVCISDTRSRTDGI----QM--PYGDILLHTGDFTELGL------PSEVKKFNDWLGNL-PYEYKIVIAGNHELTF 124 (296)
T ss_dssp TEEEEEEEBCCTTCCTTC----CC--CSCSEEEECSCCSSSCC------HHHHHHHHHHHHTS-CCSEEEECCCTTCGGG
T ss_pred CCeEEEEEeeCCCCcchh----cc--CCCCEEEECCcccCCCC------HHHHHHHHHHHHhC-CCCeEEEEcCCccccc
Confidence 469999999999865422 11 37999999999995321 12233334444433 1245899999999864
Q ss_pred cCcCCcc---cccccccccccCCC----CCCCCCCCceE----EEeeCCEEEEEEcCCCCCCC---ChHHHHHHHHHHhh
Q 012311 238 MTYMGEV---VPFKSYLHRYPTPH----LASKSSSPLWY----AIRRASAHIIVLSSYSPFVK---YTPQWEWLREELKK 303 (466)
Q Consensus 238 ~~~~~~~---~~f~~y~~rf~~P~----~~~~~~~~~yY----sf~~g~v~fI~Lds~~~~~~---~~~Q~~WL~~~L~~ 303 (466)
.+..-+. ..+..+...-..+. +.-.-..+..| +..++++.|+...-...++. ..++.+++.+.+..
T Consensus 125 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~~~~i~Gl~i~Gsp~tP~~~~~~f~~~~~~~~~~~~~~ 204 (296)
T 3rl5_A 125 DKEFMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDSEVTVKGFRIYGAPWTPWFNGWGFNLPRGQSLLDKWNL 204 (296)
T ss_dssp CHHHHHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSSEEEEETTEEEEEECCBCC--CCTTBCCTTHHHHHHHTT
T ss_pred chhhhhhhhcccccccccccccccchhhhHhhhcCCeEEecCCcEEECCEEEEEecCCCCCCCcCCCcchHHHHHHHHhh
Confidence 3211000 00000000000000 00000011122 45667888888543222221 11222344444444
Q ss_pred ccCCCCCeEEEEeccccccCCCcc-----cccCHHHHHHHHHHH-HHcCCcEEEecccceecCCcccccCCCCCcEEEEe
Q 012311 304 VDREKTPWLIVLMHVPIYNSNEAH-----FMEGESMRAAFESWF-VRYKVDYRISNLHYNISSGDCFPVPDKSAPVYITV 377 (466)
Q Consensus 304 ~~r~~~~w~IV~~H~P~y~s~~~h-----~~~~~~~r~~l~~ll-~~y~Vd~~~~gh~~~~~~~~~~~~~~~~g~vyiv~ 377 (466)
.. ....|++.|.|++.....- ....+ .|...+ .+++.+++++||.|.-. +. ...+++++|-.
T Consensus 205 ip---~~~dILvTH~PP~g~~D~~~~~~~~~G~~----~L~~~i~~~~~p~l~v~GH~H~~~-~~----~~~g~t~vvNp 272 (296)
T 3rl5_A 205 IP---EGTDILMTHGPPLGFRDWVPKELQRVGCV----ELLNTVQRRVRPKLHVFGGIHEGY-GT----MTDGYTTYINA 272 (296)
T ss_dssp SC---TTCSEEEESSCBTTSSCEEGGGTEECSBH----HHHHHHHHTTCCSEEEECSCGGGC-EE----EECSSCEEEEC
T ss_pred CC---CCCeEEEECCCccccccccccccCcCChH----HHHHHHHHhcCCCEEEECCccCCC-ce----EEECCEEEEEC
Confidence 32 2346899999999864311 01123 333444 68999999999987421 11 12356888888
Q ss_pred CCCCCC
Q 012311 378 GDGGNQ 383 (466)
Q Consensus 378 G~gG~~ 383 (466)
|+-|..
T Consensus 273 Gs~~~~ 278 (296)
T 3rl5_A 273 STCTVS 278 (296)
T ss_dssp BCSCTT
T ss_pred CcCCcC
Confidence 877654
|
| >3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A* | Back alignment and structure |
|---|
Probab=98.83 E-value=3.9e-08 Score=100.10 Aligned_cols=175 Identities=15% Similarity=0.014 Sum_probs=93.2
Q ss_pred CCCeEEEEEccCCCCCCc----------HHHHHHH----HHhCCCEEEEcccccccccccccccchhHHHHHHHHHHHhh
Q 012311 157 DASYKFGIIGDLGQTYNS----------LSTLEHY----MESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAA 222 (466)
Q Consensus 157 ~~~~~f~v~GD~g~~~~~----------~~tl~~~----~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~ 222 (466)
..++||++++|+|.+... ...++.+ .+.++|+||++||++.... +. ...+..+.+.++.+..
T Consensus 18 ~~~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~~~-p~---~~~~~~~~~~l~~L~~ 93 (386)
T 3av0_A 18 GSHMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLR-PP---VKALRIAMQAFKKLHE 93 (386)
T ss_dssp CCCCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSSSS-CC---HHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCC-CC---HHHHHHHHHHHHHHHh
Confidence 357999999999987421 1233333 3348999999999984322 11 2234556666766654
Q ss_pred -cCCeEEcCCCceeeccCcCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCCCCCC--ChHHHHHHHH
Q 012311 223 -YQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVK--YTPQWEWLRE 299 (466)
Q Consensus 223 -~~P~~~~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~~~~--~~~Q~~WL~~ 299 (466)
.+|+++++||||...... ...+...+...+..-. ...++..+-+++.|+.++....... ..++++||..
T Consensus 94 ~~~pv~~v~GNHD~~~~~~--~~~~~~~l~~~v~~l~------~~~v~~~~~~~v~i~gl~~~~~~~~~~~~~~l~~l~~ 165 (386)
T 3av0_A 94 NNIKVYIVAGNHEMPRRLG--EESPLALLKDYVKILD------GKDVINVNGEEIFICGTYYHKKSKREEMLDKLKNFES 165 (386)
T ss_dssp TTCEEEECCCGGGSCSSTT--SCCGGGGGTTTCEECS------EEEEEEETTEEEEEEEECCCCSTTHHHHHHHHHHHHH
T ss_pred cCCcEEEEcCCCCCCcccc--ccCHHHHHHHHeEEcC------CCcEEEeCCCCEEEEeCCCCCHHHHHHHHHHHHHhhh
Confidence 589999999999753210 0001111111010000 0112222225688999987543210 1223333433
Q ss_pred HHhhccCCCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccce
Q 012311 300 ELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYN 357 (466)
Q Consensus 300 ~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~ 357 (466)
++. ...+.|+++|.|+.......+.. . +. .|. ++|++++||.|.
T Consensus 166 ~~~-----~~~~~Ill~H~~~~~~~~~~~~~--~----~~-~l~--~~d~v~~GH~H~ 209 (386)
T 3av0_A 166 EAK-----NYKKKILMLHQGINPYIPLDYEL--E----HF-DLP--KFSYYALGHIHK 209 (386)
T ss_dssp HHH-----TCSSEEEEECCCCTTTSSSSCSS--C----GG-GSC--CCSEEEECSCCS
T ss_pred hcc-----cCCCEEEEECcCccccCCCCccc--C----HH-Hhh--hCCeEEccCCCC
Confidence 332 23468999999985421111100 0 11 122 399999999883
|
| >3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=98.82 E-value=5.5e-08 Score=87.74 Aligned_cols=158 Identities=11% Similarity=0.036 Sum_probs=98.7
Q ss_pred CeEEEEEccCCCCCCcHHHHHHHHHh---CCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCcee
Q 012311 159 SYKFGIIGDLGQTYNSLSTLEHYMES---GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEI 235 (466)
Q Consensus 159 ~~~f~v~GD~g~~~~~~~tl~~~~~~---~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~ 235 (466)
..|++++||++.. ...++++.+. ++|+|+++||+.+. . ++.+. .|++.++||||.
T Consensus 6 ~m~i~~isD~H~~---~~~~~~~~~~~~~~~d~i~~~GD~~~~--~---------------l~~l~--~~~~~v~GNhD~ 63 (176)
T 3ck2_A 6 KQTIIVMSDSHGD---SLIVEEVRDRYVGKVDAVFHNGDSELR--P---------------DSPLW--EGIRVVKGNMDF 63 (176)
T ss_dssp CEEEEEECCCTTC---HHHHHHHHHHHTTTSSEEEECSCCCSC--T---------------TCGGG--TTEEECCCTTCC
T ss_pred CcEEEEEecCCCC---HHHHHHHHHHhhcCCCEEEECCCCchH--H---------------HHhhh--CCeEEecCcccc
Confidence 5799999999953 3334443332 79999999997431 0 11122 289999999996
Q ss_pred eccCcCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEE
Q 012311 236 EYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVL 315 (466)
Q Consensus 236 ~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~~~~~~~Q~~WL~~~L~~~~r~~~~w~IV~ 315 (466)
.. .+|. ...+.. ..++|++
T Consensus 64 ~~-----------------~~p~---------~~~~~~-----------------------------------~~~~i~~ 82 (176)
T 3ck2_A 64 YA-----------------GYPE---------RLVTEL-----------------------------------GSTKIIQ 82 (176)
T ss_dssp ST-----------------TCCS---------EEEEEE-----------------------------------TTEEEEE
T ss_pred hh-----------------cCCc---------EEEEEE-----------------------------------CCeEEEE
Confidence 31 0121 000100 1257889
Q ss_pred eccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccceecCCcccccCCCCCcEEEEeCCCCCCCCCCCCCCCCCC
Q 012311 316 MHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQP 395 (466)
Q Consensus 316 ~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~~~~~~~~~~~~~g~vyiv~G~gG~~~~~~~~~~~~~p 395 (466)
.|.|++.... .. +.+..++.++++|++++||.|.-... ..+++.+|..|+.|.... .
T Consensus 83 ~Hg~~~~~~~----~~----~~l~~~~~~~~~d~vi~GHtH~~~~~------~~~~~~~inpGs~~~~~~-------~-- 139 (176)
T 3ck2_A 83 THGHLFDINF----NF----QKLDYWAQEEEAAICLYGHLHVPSAW------LEGKILFLNPGSISQPRG-------T-- 139 (176)
T ss_dssp ECSGGGTTTT----CS----HHHHHHHHHTTCSEEECCSSCCEEEE------EETTEEEEEECCSSSCCT-------T--
T ss_pred ECCCccCCCC----CH----HHHHHHHHhcCCCEEEECCcCCCCcE------EECCEEEEECCCCCcCCC-------C--
Confidence 9999875321 12 24567788899999999998843211 124678888887664311 0
Q ss_pred CccceeeCcccEEEEEEecCCeEEEEEEEcCCCce
Q 012311 396 DYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGKK 430 (466)
Q Consensus 396 ~~sa~~~~~~G~~~l~v~n~t~l~~~~~~~~dg~~ 430 (466)
....+|+.+++.+ ..+.+++++ -+|+.
T Consensus 140 ------~~~~~y~il~~~~-~~~~v~~~~-~~~~~ 166 (176)
T 3ck2_A 140 ------IRECLYARVEIDD-SYFKVDFLT-RDHEV 166 (176)
T ss_dssp ------CCSCCEEEEEECS-SEEEEEEEC-TTSCB
T ss_pred ------CCCCeEEEEEEcC-CEEEEEEEE-ECCEE
Confidence 1125799999954 468888876 56765
|
| >3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* | Back alignment and structure |
|---|
Probab=98.80 E-value=2.5e-08 Score=96.55 Aligned_cols=219 Identities=12% Similarity=0.055 Sum_probs=116.3
Q ss_pred CCeEEEEEccCCCCCCcH-HHHHHHHHhCCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCceee
Q 012311 158 ASYKFGIIGDLGQTYNSL-STLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIE 236 (466)
Q Consensus 158 ~~~~f~v~GD~g~~~~~~-~tl~~~~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~~ 236 (466)
.+.|+++++|++...... ..++.+.+.++|.|+++||++..... ..+..+.++ ...|++.+.||||..
T Consensus 10 ~~~~i~~iSDiHg~~~~l~~vl~~~~~~~~D~ii~~GDlv~~g~~--------~~~~~~~l~---~~~~~~~v~GNhD~~ 78 (270)
T 3qfm_A 10 DMTKIALLSDIHGNTTALEAVLADARQLGVDEYWLLGDILMPGTG--------RRRILDLLD---QLPITARVLGNWEDS 78 (270)
T ss_dssp -CEEEEEECCCTTCHHHHHHHHHHHHHTTCCEEEECSCCSSSSSC--------SHHHHHHHH---TSCEEEECCCHHHHH
T ss_pred cccEEEEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCC--------HHHHHHHHH---ccCCEEEEcCChHHH
Confidence 578999999999643222 22334444589999999999953211 122333333 334789999999975
Q ss_pred ccCcCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEEe
Q 012311 237 YMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLM 316 (466)
Q Consensus 237 ~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~~~~~~~Q~~WL~~~L~~~~r~~~~w~IV~~ 316 (466)
... .....+.++. ....+.+ . ...+..-....+|++||++--......-...+|++.
T Consensus 79 ~~~---------~~~~~~~~~~-----~~~~~~~----~-----~~~~~~~~L~~~~~~~L~~LP~~~~~~~~g~~i~lv 135 (270)
T 3qfm_A 79 LWH---------GVRKELDSTR-----PSQRYLL----R-----QCQYVLEEISLEEIEVLHNQPLQIHRQFGDLTVGIS 135 (270)
T ss_dssp HHH---------HHTTCSCTTS-----HHHHHHH----H-----HHHHHHTTSCHHHHHHHHSCCSEEEEEETTEEEEEE
T ss_pred HHH---------hhccccCCCc-----HHHHHHH----H-----HHHHHHHHcCHHHHHHHHhCCCceEEEECCcEEEEE
Confidence 210 0000000000 0000000 0 000000123578999998643322111123567788
Q ss_pred ccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccceecCCcccccCCCCCcEEEEeCCCCCCCCCCCCCCCCCCC
Q 012311 317 HVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPD 396 (466)
Q Consensus 317 H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~~~~~~~~~~~~~g~vyiv~G~gG~~~~~~~~~~~~~p~ 396 (466)
|..+.+... ++.....-.+.+..++.+.++|++++||.|.-.. . ...++..+|..|+.|.+... .+.++
T Consensus 136 Hg~p~~~~~-~~~~~~~~~~~l~~~~~~~~~d~~i~GHtH~~~~--~---~~~~~~~~iNpGSvg~pr~~-----~~~~~ 204 (270)
T 3qfm_A 136 HHLPDKNWG-RELIHTGKQEEFDRLVTHPPCDIAVYGHIHQQLL--R---YGTGGQLIVNPGSIGQPFFL-----DAQLR 204 (270)
T ss_dssp SSBTTBSSS-STTSTTCCHHHHHHTTTTTTCSEEECCSSCSEEE--E---ECTTSCEEEEECCSSSCCCS-----STTGG
T ss_pred ECCCCCCCC-ceecCCCcHHHHHHHhcccCCCEEEECCcCchHh--e---eccCCEEEEECCCccCCCCC-----Ccccc
Confidence 876644211 1111111235677888889999999999983111 0 11357889999998876421 11100
Q ss_pred ccceeeCcccEEEEEEecCCeEEEEEEEc
Q 012311 397 YSAFREASYGHSTLEIKNRTHAFYHWNRN 425 (466)
Q Consensus 397 ~sa~~~~~~G~~~l~v~n~t~l~~~~~~~ 425 (466)
......|+.|++.++....+++++.
T Consensus 205 ----~~~~asyaild~~~~~~~~v~~~rv 229 (270)
T 3qfm_A 205 ----KDLRAQYMILEFDDKGLVDMDFRRV 229 (270)
T ss_dssp ----GCCCEEEEEEEEETTEEEEEEEEEE
T ss_pred ----CCCCCEEEEEEecCCCceEEEEEEe
Confidence 0123469999996544356777664
|
| >3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C | Back alignment and structure |
|---|
Probab=98.78 E-value=1.3e-08 Score=103.47 Aligned_cols=185 Identities=15% Similarity=0.093 Sum_probs=99.8
Q ss_pred eEEEEEccCCCCCC----c---------HHHHHHH----HHhCCCEEEEcccccccccccccccchhHHHHHHHHHHHhh
Q 012311 160 YKFGIIGDLGQTYN----S---------LSTLEHY----MESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAA 222 (466)
Q Consensus 160 ~~f~v~GD~g~~~~----~---------~~tl~~~----~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~ 222 (466)
+||+.++|+|.+.. . ...++++ .+.++|+||++||++....... ...+..+.+.+..+..
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~~~---~~~~~~~~~~l~~l~~ 77 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPS---VVALHDLLDYLKRMMR 77 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSSCC---HHHHHHHHHHHHHHHH
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccCCCCC---HHHHHHHHHHHHHHHh
Confidence 48999999997653 1 1234443 3449999999999994322221 2334556666666654
Q ss_pred cCCeEEcCCCceeeccCcCCcccccccccccccCCCCCCCCCCCceEEEe--eC-CEEEEEEcCCCCCC----CChHHHH
Q 012311 223 YQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIR--RA-SAHIIVLSSYSPFV----KYTPQWE 295 (466)
Q Consensus 223 ~~P~~~~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~--~g-~v~fI~Lds~~~~~----~~~~Q~~ 295 (466)
.+|+++++||||..... -+..... .+|.+...-....-+.+. .| .+.|..+.-..... ....+.+
T Consensus 78 ~~~v~~i~GNHD~~~~~------~~~~~~~--~~~~~~~~~~~~~~v~l~~~~G~~v~i~glp~~~~~~~~~~~~~~~~~ 149 (379)
T 3tho_B 78 TAPVVVLPGNQDWKGLK------LFGNFVT--SISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDESEALRKNEGDFRF 149 (379)
T ss_dssp HSCEEECCCTTSCTTHH------HHHHHHH--TTCSSEEECCSSCCEEEECTTCCEEEEEEECCCCCC----CHHHHHHH
T ss_pred CCCEEEEcCCCccccCc------ccccccc--ccCCcceeecccceEEEEcCCCCEEEEEECCCCCHHHHhhhhccchHH
Confidence 49999999999953110 0001100 011100000000112222 24 47777775432211 1356789
Q ss_pred HHHHHHhhc---cCCCCCeEEEEeccccccCCCcccccCH-HHHHHHHHHHHHcCCcEEEecccce
Q 012311 296 WLREELKKV---DREKTPWLIVLMHVPIYNSNEAHFMEGE-SMRAAFESWFVRYKVDYRISNLHYN 357 (466)
Q Consensus 296 WL~~~L~~~---~r~~~~w~IV~~H~P~y~s~~~h~~~~~-~~r~~l~~ll~~y~Vd~~~~gh~~~ 357 (466)
|+.+.|++. ......+.|++.|.++...... .+.+ .+...+...+...++|++.+||.|.
T Consensus 150 ~l~~~l~~~~~~~~~~~~~~I~l~H~~v~g~~~~--~~se~~~~~~v~~~~~~~~~dyvalGH~H~ 213 (379)
T 3tho_B 150 FLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGY--AGIEQGREIIINRALIPSVVDYAALGHIHS 213 (379)
T ss_dssp HHHHHHHHHHHHHHTCSSEEEEEEESCBSCCCC---------CSCCBCGGGSCTTSSEEEEESCSS
T ss_pred HHHHHHHHHHHHhcCCCCCeEEEEeccccCCccC--CCCccccccccCHHHcCcCCCEEEcccccC
Confidence 999999831 1124567899999998643220 0111 0001222233357899999999874
|
| >1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8 | Back alignment and structure |
|---|
Probab=98.60 E-value=1.5e-07 Score=86.36 Aligned_cols=134 Identities=15% Similarity=0.145 Sum_probs=80.8
Q ss_pred eEEEEEccCCCCCCcH----------HH----HHHHHH--hCCCEEEEcccccccccccccccchhHHHHHHHHHHHhhc
Q 012311 160 YKFGIIGDLGQTYNSL----------ST----LEHYME--SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAY 223 (466)
Q Consensus 160 ~~f~v~GD~g~~~~~~----------~t----l~~~~~--~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~ 223 (466)
+++++++|+|.+.... .. ++.+.+ .++|+|+++||++... . + . ....+.++.+ .
T Consensus 2 ~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~--~--~-~---~~~~~~l~~l--~ 71 (195)
T 1xm7_A 2 AMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHF--N--D-K---NEYLRIWKAL--P 71 (195)
T ss_dssp CCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCS--C--C-T---TSHHHHHHHS--S
T ss_pred cEEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCCEEEECCCCCCCc--h--h-H---HHHHHHHHHC--C
Confidence 5799999999764321 11 222333 2799999999999642 1 1 1 2233444443 3
Q ss_pred CCeEEcCCCceeeccCcCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCCCCCCChHHHHHHHHHHhh
Q 012311 224 QPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKK 303 (466)
Q Consensus 224 ~P~~~~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~~~~~~~Q~~WL~~~L~~ 303 (466)
.|++.++||||.... .+...| -+ + +|..||+ +
T Consensus 72 ~~~~~v~GNhD~~~~----------~~~~~~--------------~~----------l----------~~~~~l~----~ 103 (195)
T 1xm7_A 72 GRKILVMGNHDKDKE----------SLKEYF--------------DE----------I----------YDFYKII----E 103 (195)
T ss_dssp SEEEEECCTTCCCHH----------HHTTTC--------------SE----------E----------ESSEEEE----E
T ss_pred CCEEEEeCCCCCchh----------hhhhhh--------------hc----------h----------hHHHHHH----h
Confidence 589999999997421 111111 00 0 0112222 1
Q ss_pred ccCCCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEeccccee
Q 012311 304 VDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYNI 358 (466)
Q Consensus 304 ~~r~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~ 358 (466)
. ..++|+++|+|++......+ ....+.+..++.++++|++++||.|.-
T Consensus 104 ~----~~~~i~~~H~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~vi~GHtH~~ 151 (195)
T 1xm7_A 104 H----KGKRILLSHYPAKDPITERY---PDRQEMVREIYFKENCDLLIHGHVHWN 151 (195)
T ss_dssp E----TTEEEEEESSCSSCSSCCSC---HHHHHHHHHHHHHTTCSEEEECCCCCC
T ss_pred c----CCcEEEEEccCCcCCCcccc---cchHHHHHHHHHHcCCcEEEECCcCCC
Confidence 1 23579999999977543222 233578888999999999999999853
|
| >3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0 | Back alignment and structure |
|---|
Probab=98.56 E-value=3.4e-07 Score=87.07 Aligned_cols=149 Identities=13% Similarity=0.150 Sum_probs=83.2
Q ss_pred CeEEEEEccCCCCCCcHHHHHHHHHh--CCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCceee
Q 012311 159 SYKFGIIGDLGQTYNSLSTLEHYMES--GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIE 236 (466)
Q Consensus 159 ~~~f~v~GD~g~~~~~~~tl~~~~~~--~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~~ 236 (466)
.+|++++||+|.. ...+.++.+. ++|.++++||++..... . .+..+.+..+ .+++.+.||||..
T Consensus 3 ~mri~~isDiHg~---~~~l~~~l~~~~~~d~ii~~GDl~~~g~~-----~---~~~~~~l~~~---~~~~~v~GNhD~~ 68 (246)
T 3rqz_A 3 AMRILIISDVHAN---LVALEAVLSDAGRVDDIWSLGDIVGYGPR-----P---RECVELVRVL---APNISVIGNHDWA 68 (246)
T ss_dssp CCCEEEECCCTTC---HHHHHHHHHHHCSCSEEEECSCCSSSSSC-----H---HHHHHHHHHH---CSSEECCCHHHHH
T ss_pred CcEEEEEeecCCC---HHHHHHHHHhccCCCEEEECCCcCCCCCC-----H---HHHHHHHHhc---CCCEEEeCchHHH
Confidence 5789999999953 3344444333 89999999999942211 1 2233333333 2368999999975
Q ss_pred ccCcCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEEe
Q 012311 237 YMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLM 316 (466)
Q Consensus 237 ~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~~~~~~~Q~~WL~~~L~~~~r~~~~w~IV~~ 316 (466)
...... .. .+. +. ......|. .-....+|.+||++....... . .|++.
T Consensus 69 ~~~~~~----~~----~~~-~~---~~~~~~~~----------------~~~l~~~~~~~L~~lp~~~~~-~---~i~~~ 116 (246)
T 3rqz_A 69 CIGRLS----LD----EFN-PV---ARFASYWT----------------TMQLQAEHLQYLESLPNRMID-G---DWTVV 116 (246)
T ss_dssp HTCCCC----CC------C-GG---GGCHHHHH----------------HHHCCHHHHHHHHHCCSEEEE-T---TEEEE
T ss_pred HhccCC----cc----ccC-HH---HHHHHHHH----------------HHHcCHHHHHHHHhCCcEEEE-C---CEEEE
Confidence 321000 00 000 00 00000000 001347889999864333221 1 47778
Q ss_pred ccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccce
Q 012311 317 HVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYN 357 (466)
Q Consensus 317 H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~ 357 (466)
|.++.+... .+... ...+..+|.++++|++++||.|.
T Consensus 117 Hg~p~~~~~-~~~~~---~~~~~~~l~~~~~~l~i~GHtH~ 153 (246)
T 3rqz_A 117 HGSPRHPIW-EYIYN---ARIAALNFPAFDTPLCFVGHTHV 153 (246)
T ss_dssp SSCSSSTTT-CCCCS---HHHHHHHGGGCCSSEEECCSSSS
T ss_pred ECCcCCccc-cccCC---hHHHHHHHhccCCCEEEECCcCc
Confidence 988765321 11111 24567789999999999999984
|
| >2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.54 E-value=3.1e-06 Score=76.60 Aligned_cols=62 Identities=16% Similarity=0.110 Sum_probs=41.3
Q ss_pred CeEEEEEccCCCCCC---cHHHHHHHHHhCCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCcee
Q 012311 159 SYKFGIIGDLGQTYN---SLSTLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEI 235 (466)
Q Consensus 159 ~~~f~v~GD~g~~~~---~~~tl~~~~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~ 235 (466)
-+|+++++|++...+ -...++.+. .++|+|+++||++.. +..+.++.+ ..|++.++||||.
T Consensus 22 mmri~~iSD~Hg~~~~~~l~~~l~~~~-~~~D~ii~~GD~~~~-------------~~~~~l~~~--~~~v~~V~GNhD~ 85 (178)
T 2kkn_A 22 VKRFLLISDSHVPVRMASLPDEILNSL-KEYDGVIGLGDYVDL-------------DTVILLEKF--SKEFYGVHGNMDY 85 (178)
T ss_dssp CEEEEEECCCCBTTTTCCCCHHHHHGG-GGCSEEEESSCBSCH-------------HHHHHHHHH--TSSEEECCCSSSC
T ss_pred ceEEEEEecccCCCCHHHHHHHHHHHh-cCCCEEEECCCCCCH-------------HHHHHHHhc--CCCEEEEECCCCc
Confidence 479999999994222 123333333 589999999999831 123333333 3699999999996
Q ss_pred e
Q 012311 236 E 236 (466)
Q Consensus 236 ~ 236 (466)
.
T Consensus 86 ~ 86 (178)
T 2kkn_A 86 P 86 (178)
T ss_dssp G
T ss_pred H
Confidence 3
|
| >1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A | Back alignment and structure |
|---|
Probab=98.38 E-value=1.8e-06 Score=78.99 Aligned_cols=63 Identities=22% Similarity=0.257 Sum_probs=40.9
Q ss_pred CeEEEEEccCCCCCCcH-HHHHHHHHhCCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCceee
Q 012311 159 SYKFGIIGDLGQTYNSL-STLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIE 236 (466)
Q Consensus 159 ~~~f~v~GD~g~~~~~~-~tl~~~~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~~ 236 (466)
.+|++++||++...... ..++.+.+.++|+|+++||++. . ...+.++.+ ..|++.++||||..
T Consensus 25 ~m~i~~iSD~Hg~~~~l~~~l~~~~~~~~D~ii~~GDl~~---------~----~~~~~l~~l--~~~~~~V~GNhD~~ 88 (190)
T 1s3l_A 25 HMKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVS---------L----FVIKEFENL--NANIIATYGNNDGE 88 (190)
T ss_dssp -CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCS---------T----HHHHHGGGC--SSEEEEECCTTCCC
T ss_pred CeEEEEEeeCCCCHHHHHHHHHHHhhcCCCEEEECCCCCC---------H----HHHHHHHhc--CCCEEEEeCCCcch
Confidence 38999999999432111 2233334458999999999972 1 122222221 57999999999975
|
| >4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B* | Back alignment and structure |
|---|
Probab=98.37 E-value=1.4e-05 Score=81.69 Aligned_cols=248 Identities=13% Similarity=0.067 Sum_probs=118.1
Q ss_pred CCCeEEEEEccCCCCCC---------cHHHHHH----HHHhCCCEEEEcccccccccccccccchhHHHHHHHHHH----
Q 012311 157 DASYKFGIIGDLGQTYN---------SLSTLEH----YMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVER---- 219 (466)
Q Consensus 157 ~~~~~f~v~GD~g~~~~---------~~~tl~~----~~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~---- 219 (466)
...+||+.++|+|.+.. ...++++ +.+.++|+||++||++...... ......+.+.++.
T Consensus 11 ~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~p~----~~~~~~~~~~lr~~~~g 86 (417)
T 4fbw_A 11 ENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPS----RKALYQALRSLRLNCLG 86 (417)
T ss_dssp TTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCC----HHHHHHHHHHHHHHHBS
T ss_pred CCCeEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCC----HHHHHHHHHHHHHhccc
Confidence 46899999999998742 2233443 3445999999999998543221 1222333444433
Q ss_pred --------H----------------------hhcCCeEEcCCCceeeccCcCCc-cccc--ccccccccCCCC-CCCCCC
Q 012311 220 --------S----------------------AAYQPWIWSAGNHEIEYMTYMGE-VVPF--KSYLHRYPTPHL-ASKSSS 265 (466)
Q Consensus 220 --------l----------------------~~~~P~~~~~GNHE~~~~~~~~~-~~~f--~~y~~rf~~P~~-~~~~~~ 265 (466)
+ ...+|++.+.||||......... ..-+ ......|..... +.-...
T Consensus 87 ~~~~~~e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~~~~~~~s~~~lL~~~g~v~l~g~~~~~~~i~~~ 166 (417)
T 4fbw_A 87 DKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGDGRYSALDILQVTGLVNYFGRVPENDNIVVS 166 (417)
T ss_dssp SCCCCCEECC------------CCGGGCTTBCBSSCEEECCCGGGC-----CCCHHHHHHHTTSCEECCCCC---CEEEC
T ss_pred CCcccceeccchhhhcccccccccccccccccCCCeEEEEecCCCCccccccccHHHHhccCCeEEEeCCcccCCceeEE
Confidence 1 13789999999999753211000 0000 000011111000 000000
Q ss_pred CceEEEeeCC--EEEEEEcCCCCCCCChHH-HHHHHHHHhhc-cC---CCCCeEEEEeccccccCCCcccccCHHHHHHH
Q 012311 266 PLWYAIRRAS--AHIIVLSSYSPFVKYTPQ-WEWLREELKKV-DR---EKTPWLIVLMHVPIYNSNEAHFMEGESMRAAF 338 (466)
Q Consensus 266 ~~yYsf~~g~--v~fI~Lds~~~~~~~~~Q-~~WL~~~L~~~-~r---~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l 338 (466)
+ ..+.-|+ +.+..+.-- ..+. .+++.+...+. .. ....+.|++.|...-......+ ..+
T Consensus 167 p--v~l~~g~~~valyG~~~~-----~d~rl~r~~~~~~v~~~~p~~~~~~~~nIlvlH~~~~~~~~~~y-ip~------ 232 (417)
T 4fbw_A 167 P--ILLQKGFTKLALYGISNV-----RDERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNHSAHTPTSY-LPE------ 232 (417)
T ss_dssp C--EEEEETTEEEEEEEECCC-----CHHHHHHHHHTTCEEEEEESTTTTTSEEEEEEESCSSCSSSSSS-CCG------
T ss_pred e--EEEEecCceEEEEeccCC-----chhhhhhhhhhhhhhhcCcccccCCceEEEEecCCccCCCCccc-Cch------
Confidence 1 1233333 333334321 1121 13333322221 11 2345789999997754322111 111
Q ss_pred HHHHHHcCCcEEEecccceecCCcccccCC-CCCcEEEEeCCCCCCCCCCCCCCCCCCCccceee-CcccEEEEEEecCC
Q 012311 339 ESWFVRYKVDYRISNLHYNISSGDCFPVPD-KSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFRE-ASYGHSTLEIKNRT 416 (466)
Q Consensus 339 ~~ll~~y~Vd~~~~gh~~~~~~~~~~~~~~-~~g~vyiv~G~gG~~~~~~~~~~~~~p~~sa~~~-~~~G~~~l~v~n~t 416 (466)
-+...++|+++.||.|.-. ..+..+ ..++..+-.|+.... .+ +. ++ ...||..|+|.++
T Consensus 233 --~l~~~~~DyvalGH~H~~~---~~~~~~~~~g~~i~~PGS~~~~-----s~-------~e-~E~~~kg~~lvei~~~- 293 (417)
T 4fbw_A 233 --SFIQDFYDFVLWGHEHECL---IDGSYNPTQKFTVVQPGSTIAT-----SL-------SP-GETAPKHCGILNITGK- 293 (417)
T ss_dssp --GGSCTTCSEEEEESCCSCE---EEEEEETTTTEEEEECCCSSCS-----SC-------CH-HHHSCCEEEEEEEETT-
T ss_pred --hHhhcCCCEEEecCccccc---eeccccCCCCEEEEECCCCCcC-----CC-------cc-ccCCCCEEEEEEEECC-
Confidence 2455789999999987321 100011 223333333332211 01 10 11 3568999999754
Q ss_pred eEEEEEEEcCCCceeeeeeEEEEec
Q 012311 417 HAFYHWNRNDDGKKVATDSFILHNQ 441 (466)
Q Consensus 417 ~l~~~~~~~~dg~~~~~D~~~i~k~ 441 (466)
.+.++++.-+.-...+..++.+...
T Consensus 294 ~~~~e~i~l~~~Rpf~~~~v~L~~~ 318 (417)
T 4fbw_A 294 DFHLEKIRLRTVRPFIMKDIILSEV 318 (417)
T ss_dssp EEEEEEEECSSSCCEEEEEEEGGGC
T ss_pred EEEEEEEECCCcccEEEEEEEeecc
Confidence 5788888644434345666666554
|
| >4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=1.4e-05 Score=82.50 Aligned_cols=76 Identities=17% Similarity=0.127 Sum_probs=50.1
Q ss_pred CCCeEEEEEccCCCCCC---------cHHHHH----HHHHhCCCEEEEcccccccccccccccchhHHHHHHHHHH----
Q 012311 157 DASYKFGIIGDLGQTYN---------SLSTLE----HYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVER---- 219 (466)
Q Consensus 157 ~~~~~f~v~GD~g~~~~---------~~~tl~----~~~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~---- 219 (466)
...+||+.++|+|.+.. ...+++ .+.+.+||+||++||++...... ......+.+.++.
T Consensus 74 ~~~mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~ps----~~a~~~~~~~Lr~~~~g 149 (472)
T 4fbk_A 74 ENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPS----RKALYQALRSLRLNCLG 149 (472)
T ss_dssp TTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCSBSSSSCC----HHHHHHHHHHHHHHHBS
T ss_pred CCCeEEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCC----HHHHHHHHHHHHHhccc
Confidence 46899999999998642 122333 34445999999999998543321 2223334444443
Q ss_pred --------H----------------------hhcCCeEEcCCCceee
Q 012311 220 --------S----------------------AAYQPWIWSAGNHEIE 236 (466)
Q Consensus 220 --------l----------------------~~~~P~~~~~GNHE~~ 236 (466)
+ ...+|++++.||||..
T Consensus 150 ~~~~~~e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~ 196 (472)
T 4fbk_A 150 DKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDP 196 (472)
T ss_dssp SCCCCCEEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSC
T ss_pred CCcchheecchhhhhcccccccccccccccccCCCcEEEEecCCCCc
Confidence 1 1378999999999975
|
| >1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A | Back alignment and structure |
|---|
Probab=98.10 E-value=7.9e-06 Score=86.18 Aligned_cols=185 Identities=14% Similarity=0.055 Sum_probs=92.4
Q ss_pred CCeEEEEEccCCCCCCc-------HH----HHHHHHHh----CC-CEEEEcccccccccccccccchhHHHHHHHHHHHh
Q 012311 158 ASYKFGIIGDLGQTYNS-------LS----TLEHYMES----GA-QTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSA 221 (466)
Q Consensus 158 ~~~~f~v~GD~g~~~~~-------~~----tl~~~~~~----~~-dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~ 221 (466)
..++|+.++|+|..... .. .++++.+. ++ +++|.+||++. +....+ ........+.+..+
T Consensus 7 ~~l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~--g~~~~~-~~~~~~~~~~ln~l- 82 (516)
T 1hp1_A 7 YKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINT--GVPESD-LQDAEPDFRGMNLV- 82 (516)
T ss_dssp EEEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSS--SCHHHH-TTTTHHHHHHHHHH-
T ss_pred eEEEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCC--Ccchhh-hcCCcHHHHHHhcc-
Confidence 47999999999875321 11 23333322 46 69999999984 221101 01122333444443
Q ss_pred hcCCeEEcCCCceeeccCcCCcccccccccccccCCC---C----CCC-CCCCceEEEeeCC--EEEEEEcCCCC--CC-
Q 012311 222 AYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPH---L----ASK-SSSPLWYAIRRAS--AHIIVLSSYSP--FV- 288 (466)
Q Consensus 222 ~~~P~~~~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~---~----~~~-~~~~~yYsf~~g~--v~fI~Lds~~~--~~- 288 (466)
. +-+.++||||++.... .+..+......|. | ..+ .....|.-++.++ +-||.+.+... +.
T Consensus 83 -g-~d~~~~GNHEfd~g~~-----~l~~~~~~~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~ 155 (516)
T 1hp1_A 83 -G-YDAMAIGNHEFDNPLT-----VLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGN 155 (516)
T ss_dssp -T-CCEEECCGGGGSSCHH-----HHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSS
T ss_pred -C-CCEEeeccccccCCHH-----HHHHHHhhCCCCEEEeEEEECCCCCcccCCeEEEEECCEEEEEEEecccCcccccC
Confidence 2 3467899999864310 0111111111111 1 000 0113456678887 56666655321 11
Q ss_pred ----------CChHH-HHHHHHHHhhccCCCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccce
Q 012311 289 ----------KYTPQ-WEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYN 357 (466)
Q Consensus 289 ----------~~~~Q-~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~ 357 (466)
...++ .+|+++ |++. .+...+|++.|.|....... .+.......+...+...+||++++||.|.
T Consensus 156 p~~~~~~~~~d~~~~~~~~v~~-l~~~--~~~d~iI~l~H~g~~~~~~~--~~~~~~~~~la~~~~~~~iDlilgGHtH~ 230 (516)
T 1hp1_A 156 PEYFTDIEFRKPADEAKLVIQE-LQQT--EKPDIIIAATHMGHYDNGEH--GSNAPGDVEMARALPAGSLAMIVGGHSQD 230 (516)
T ss_dssp CCSCTTEEECCHHHHHHHHHHH-HHHH--TCCSEEEEEEESCCCGGGCC--TTSCCCHHHHHHHSCTTSSSEEECCSSCC
T ss_pred cCccCCcEEeCHHHHHHHHHHH-HHhc--CCCCEEEEEecCCccCCCcc--cccCchHHHHHHhCCCCceeEEECCCCCc
Confidence 00122 334433 4431 25678999999998653221 11101112333344555699999999985
Q ss_pred e
Q 012311 358 I 358 (466)
Q Consensus 358 ~ 358 (466)
.
T Consensus 231 ~ 231 (516)
T 1hp1_A 231 P 231 (516)
T ss_dssp B
T ss_pred c
Confidence 4
|
| >2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.06 E-value=2.9e-05 Score=82.53 Aligned_cols=175 Identities=14% Similarity=0.079 Sum_probs=91.3
Q ss_pred CCCeEEEEEccCCCCCC--------------cHHH----HHHHHHhCCC-EEEEcccccccccccccccchhHHHHHHHH
Q 012311 157 DASYKFGIIGDLGQTYN--------------SLST----LEHYMESGAQ-TVLFLGDLSYADRYQFIDVGVRWDSWGRFV 217 (466)
Q Consensus 157 ~~~~~f~v~GD~g~~~~--------------~~~t----l~~~~~~~~d-fvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~ 217 (466)
...+||+.++|+|.... .... ++++.+..++ ++|.+||++...... . ........+.+
T Consensus 27 ~~~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~~~--~-~~~~~~~~~~l 103 (552)
T 2z1a_A 27 GFTLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLYF--N-QYRGLADRYFM 103 (552)
T ss_dssp -CEEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHHH--H-HHTTHHHHHHH
T ss_pred CeeEEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcHHH--H-HhCCcHHHHHH
Confidence 35799999999996421 1122 3444445787 889999999532110 0 00112222233
Q ss_pred HHHhhcCCeEEcCCCceeeccCcCCcccccccccccccCCCCC-----CC-----CCCCceEEEeeCC--EEEEEEcCCC
Q 012311 218 ERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLA-----SK-----SSSPLWYAIRRAS--AHIIVLSSYS 285 (466)
Q Consensus 218 ~~l~~~~P~~~~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~~~-----~~-----~~~~~yYsf~~g~--v~fI~Lds~~ 285 (466)
..+ -+-+.++||||+++... .+..+......|.-. .+ .....|.-++.++ +-||.+.+..
T Consensus 104 n~l---g~d~~~lGNHEfd~g~~-----~l~~~l~~~~~~~L~aNv~~~~~~~~~~~~~~~~i~~~~G~kIgiiG~~~~~ 175 (552)
T 2z1a_A 104 HRL---RYRAMALGNHEFDLGPG-----PLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPD 175 (552)
T ss_dssp HHT---TCCEEECCGGGGTTCHH-----HHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECTT
T ss_pred Hhc---CCCccccccccccCCHH-----HHHHHHhhCCCCEEEEEEecCCCcccccccCCeEEEEECCEEEEEEEecccc
Confidence 222 23478899999864210 011111111111100 00 0123566788887 5566665532
Q ss_pred -----CC--C----CChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHH-cCCcEEEec
Q 012311 286 -----PF--V----KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVR-YKVDYRISN 353 (466)
Q Consensus 286 -----~~--~----~~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~-y~Vd~~~~g 353 (466)
.- + ...++.+.+.++|++ .+...+|++.|.|.... ..+..+ .+||++++|
T Consensus 176 ~~~~~~~~~~~~~~d~~~~~~~~v~~l~~---~~~d~iIvL~H~g~~~d---------------~~la~~~~gvDlIlgG 237 (552)
T 2z1a_A 176 TREISNPGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYGED---------------LKLARRLVGVQVIVGG 237 (552)
T ss_dssp HHHHSCCCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHHHH---------------HHHHTTCSSCCEEEEC
T ss_pred hhhccCCCCCcEECCHHHHHHHHHHHHHh---cCCCEEEEEeCCCcchH---------------HHHHHhCCCccEEEeC
Confidence 00 1 112344444445654 35677999999986431 112233 589999999
Q ss_pred ccceecC
Q 012311 354 LHYNISS 360 (466)
Q Consensus 354 h~~~~~~ 360 (466)
|.|....
T Consensus 238 HtH~~~~ 244 (552)
T 2z1a_A 238 HSHTLLG 244 (552)
T ss_dssp SSCCCBS
T ss_pred CcCcccc
Confidence 9986543
|
| >1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A | Back alignment and structure |
|---|
Probab=97.98 E-value=1.6e-05 Score=78.93 Aligned_cols=73 Identities=18% Similarity=0.224 Sum_probs=50.1
Q ss_pred eEEEEEccCCCCCCc----------HHHHHH----HHHhCCCEEEEcccccccccccccccchhHHHHHHHHHHHhh-cC
Q 012311 160 YKFGIIGDLGQTYNS----------LSTLEH----YMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAA-YQ 224 (466)
Q Consensus 160 ~~f~v~GD~g~~~~~----------~~tl~~----~~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~-~~ 224 (466)
+||++++|+|.+... ...+++ +.+.++|+||++||++..... . ...+..+.+.++.+.. .+
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~~~-~---~~~~~~~~~~l~~l~~~~~ 76 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRP-S---PGTLKKAIALLQIPKEHSI 76 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSC-C---HHHHHHHHHHHHHHHTTTC
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCCCCC-C---HHHHHHHHHHHHHHHHCCC
Confidence 489999999987531 122333 334599999999999853221 1 2234556666776653 68
Q ss_pred CeEEcCCCceee
Q 012311 225 PWIWSAGNHEIE 236 (466)
Q Consensus 225 P~~~~~GNHE~~ 236 (466)
|++.++||||..
T Consensus 77 ~v~~v~GNHD~~ 88 (333)
T 1ii7_A 77 PVFAIEGNHDRT 88 (333)
T ss_dssp CEEEECCTTTCC
T ss_pred cEEEeCCcCCCc
Confidence 999999999975
|
| >3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=97.86 E-value=0.00019 Score=75.84 Aligned_cols=189 Identities=17% Similarity=0.120 Sum_probs=90.2
Q ss_pred CCCeEEEEEccCCCCCC-------------cHHH----HHHHHHhCCC-EEEEcccccccccccccccc----hhHHHHH
Q 012311 157 DASYKFGIIGDLGQTYN-------------SLST----LEHYMESGAQ-TVLFLGDLSYADRYQFIDVG----VRWDSWG 214 (466)
Q Consensus 157 ~~~~~f~v~GD~g~~~~-------------~~~t----l~~~~~~~~d-fvl~~GDl~Y~~~~~~~d~~----~~wd~~~ 214 (466)
...++|+.++|+|.... .... ++++.+..++ ++|.+||++...... .+- ..+....
T Consensus 17 ~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~gs~~~--~~~~~~~~~~~~~~ 94 (527)
T 3qfk_A 17 GSNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSPFC--NYLIAHSGSSQPLV 94 (527)
T ss_dssp -CEEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSSSHHH--HHHHHTTCSSHHHH
T ss_pred CCcEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCCcHHH--HHHhhcccCcchHH
Confidence 46899999999986431 1222 3334344565 678899999532110 000 0011222
Q ss_pred HHHHHHhhcCCeEEcCCCceeeccCcCCcccccccccccccCCCCCC-----C--CCCCceEEEeeCC--EEEEEEcCCC
Q 012311 215 RFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLAS-----K--SSSPLWYAIRRAS--AHIIVLSSYS 285 (466)
Q Consensus 215 ~~~~~l~~~~P~~~~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~~~~-----~--~~~~~yYsf~~g~--v~fI~Lds~~ 285 (466)
+.+..+ . +-++++||||+++... .+..+......|.-.. + .....|.-++.++ +-||.+.+..
T Consensus 95 ~~ln~l--g-~D~~t~GNHefd~G~~-----~l~~~~~~~~~p~l~aNv~~~g~p~~~~py~i~e~~G~kIgviG~~~~~ 166 (527)
T 3qfk_A 95 DFYNRM--A-FDFGTLGNHEFNYGLP-----YLKDTLRRLNYPVLCANIYENDSTLTDNGVKYFQVGDQTVGVIGLTTQF 166 (527)
T ss_dssp HHHHHT--C-CCEECCCGGGGTTCHH-----HHHHHHHHCSSCBCCSSEEETTEESSSCSEEEEEETTEEEEEEEEECTT
T ss_pred HHHHhc--C-CcEEeccccccccCHH-----HHHHHHHhCCCCEEEeEeeeCCCCccCCCEEEEEECCEEEEEEEeccCC
Confidence 223222 2 3356799999864311 0111111111111100 0 0113466778887 4556665532
Q ss_pred --CCC--------CChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCcc------cccCHHHHHHHHHHHHHcCCcE
Q 012311 286 --PFV--------KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAH------FMEGESMRAAFESWFVRYKVDY 349 (466)
Q Consensus 286 --~~~--------~~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h------~~~~~~~r~~l~~ll~~y~Vd~ 349 (466)
.+. ......+.+++.+++.. .+...+||+.|.+.-...... ..+.. .+ ++..-+ .-+||+
T Consensus 167 ~~~~~~~~~~~g~~~~d~~~~~~~~v~~l~-~~~D~iIvl~H~G~~~d~~~~~~~~~~~~e~~-~~-~la~~~-~~giDl 242 (527)
T 3qfk_A 167 IPHWEQPEHIQSLTFHSAFEILQQYLPEMK-RHADIIVVCYHGGFEKDLESGTPTEVLTGENE-GY-AMLEAF-SKDIDI 242 (527)
T ss_dssp GGGTSCHHHHTTEEECCHHHHHHHHHHHHH-HHCSEEEEEEECCCSBCTTTCCBSSCCSSSCC-HH-HHHHHH-GGGCSE
T ss_pred cccccCccccCCcEEcCHHHHHHHHHHHHH-hCCCEEEEEeCcCcccccccCccccccccchH-HH-HHHHhc-CCCCcE
Confidence 111 01123344555444433 357789999998764321100 11111 11 222112 248999
Q ss_pred EEecccceec
Q 012311 350 RISNLHYNIS 359 (466)
Q Consensus 350 ~~~gh~~~~~ 359 (466)
+++||.|...
T Consensus 243 IlgGHtH~~~ 252 (527)
T 3qfk_A 243 FITGHQHRQI 252 (527)
T ss_dssp EECCSSCCEE
T ss_pred EEECCCCccc
Confidence 9999998654
|
| >2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A | Back alignment and structure |
|---|
Probab=97.82 E-value=0.0003 Score=74.80 Aligned_cols=143 Identities=13% Similarity=0.028 Sum_probs=72.4
Q ss_pred CC-EEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCceeeccCcCCcccccccccccccCCCCCC---
Q 012311 186 AQ-TVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLAS--- 261 (466)
Q Consensus 186 ~d-fvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~~~~--- 261 (466)
|| ++|.+||++...... + ........+.+..+ ..+.+ + ||||++.... .+..+...+..|.-..
T Consensus 123 pd~Lll~~GD~~~gs~~~--~-~~~g~~~~~~ln~l--g~d~~-~-GNHEfd~G~~-----~l~~~l~~~~~p~L~aNv~ 190 (562)
T 2wdc_A 123 GKALVLDGGDTWTNSGLS--L-LTRGEAVVRWQNLV--GVDHM-V-SHWEWTLGRE-----RVEELLGLFRGEFLSYNIV 190 (562)
T ss_dssp CCEEEEECSCCSSSSHHH--H-HHTTHHHHHHHHHH--TCCEE-C-CSGGGGGCHH-----HHHHHHHHCCSEECCSSCE
T ss_pred CCEEEEeCCCCCCcchhh--h-hhCCHHHHHHHHhh--CCcEE-e-cchhcccCHH-----HHHHHHHhCCCCEEEEEEE
Confidence 88 889999999532110 0 01112223344443 45665 6 9999864310 1111111111111100
Q ss_pred ----C-CCCCceEEEeeCC--EEEEEEcCCC-----------C--CCCChHHHHHHHHHHhhccCCCCCeEEEEeccccc
Q 012311 262 ----K-SSSPLWYAIRRAS--AHIIVLSSYS-----------P--FVKYTPQWEWLREELKKVDREKTPWLIVLMHVPIY 321 (466)
Q Consensus 262 ----~-~~~~~yYsf~~g~--v~fI~Lds~~-----------~--~~~~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y 321 (466)
+ .....|--++.++ +-||.+.+.. . +....+..+-+.++|++ .+...+|++.|.|..
T Consensus 191 ~~~~~~~~~~py~i~e~~G~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~---~~~d~iIvLsH~g~~ 267 (562)
T 2wdc_A 191 DDLFGDPLFPAYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFALDERRLQEAVDKARA---EGANAVVLLSHNGMQ 267 (562)
T ss_dssp ETTTCCBSSCSEEEEEETTEEEEEEEECCTTHHHHSCGGGGTTEECCCCHHHHHHHHHHHHH---TTCSEEEEEECSCHH
T ss_pred ecCCCCcccCCeEEEEECCeEEEEEeeccCcccccccccccCCcEEeCHHHHHHHHHHHHHH---CCCCEEEEEeCCCCc
Confidence 0 0123466677887 5566665421 0 11122333323333443 356789999999863
Q ss_pred cCCCcccccCHHHHHHHHHHHHH-cCCcEEEeccccee
Q 012311 322 NSNEAHFMEGESMRAAFESWFVR-YKVDYRISNLHYNI 358 (466)
Q Consensus 322 ~s~~~h~~~~~~~r~~l~~ll~~-y~Vd~~~~gh~~~~ 358 (466)
.. + .+..+ .+||++++||.|..
T Consensus 268 ~d-----------~----~la~~~~giDlIlgGHtH~~ 290 (562)
T 2wdc_A 268 LD-----------A----ALAERIRGIDLILSGHTHDL 290 (562)
T ss_dssp HH-----------H----HHHTTSSSCCEEEECSSCCC
T ss_pred ch-----------H----HHHhcCCCCcEEEeCCCCCC
Confidence 20 0 23333 58999999999854
|
| >3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.80 E-value=4.1e-05 Score=78.52 Aligned_cols=76 Identities=17% Similarity=0.232 Sum_probs=51.3
Q ss_pred CCCeEEEEEccCCCCCCc---------HHHHHH----HHHhCCCEEEEcccccccccccccccchhHHHHHHHHHHHh--
Q 012311 157 DASYKFGIIGDLGQTYNS---------LSTLEH----YMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSA-- 221 (466)
Q Consensus 157 ~~~~~f~v~GD~g~~~~~---------~~tl~~----~~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~-- 221 (466)
...+||+.++|+|.+... ..++++ +.+.+||+||++||++...... ......+.+.++.+.
T Consensus 30 ~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~~~D~VliaGDlfd~~~~~----~~~~~~~~~~L~r~~~~ 105 (431)
T 3t1i_A 30 ENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKPS----RKTLHTCLELLRKYCMG 105 (431)
T ss_dssp GGEEEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCC----HHHHHHHHHHHHHHHBC
T ss_pred CCCEEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhcCCCEEEEcCccccCCCCC----HHHHHHHHHHHHHHhcc
Confidence 468999999999986431 123343 3345999999999998543321 233344455555432
Q ss_pred --------------------------------hcCCeEEcCCCceee
Q 012311 222 --------------------------------AYQPWIWSAGNHEIE 236 (466)
Q Consensus 222 --------------------------------~~~P~~~~~GNHE~~ 236 (466)
..+|++++.||||..
T Consensus 106 ~~~~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~ 152 (431)
T 3t1i_A 106 DRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDP 152 (431)
T ss_dssp SSCCCCEECSCC------------------CCBCSCEEECCCSSSCC
T ss_pred CCcccceeccchhhccccccccccccccccccCCCcEEEEccCCCCc
Confidence 369999999999975
|
| >2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.79 E-value=0.00023 Score=58.24 Aligned_cols=90 Identities=24% Similarity=0.375 Sum_probs=60.1
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC----CcEEEEeecCCCC---ceEEEeEEEEeeeeccccceEEEEEecCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKF---DFTAEGTVNNYTFYKYKSGYIHQCLVDGLEY 129 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~----~~~V~yg~~~~~~---~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P 129 (466)
.+|+.+.+.......+++.|+|..+...+ .-.|+|....+.. +... . .......++|++|+|
T Consensus 10 ~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~-----~------~~~~~~~~~i~~L~p 78 (114)
T 2ede_A 10 SAPKDLTVITREGKPRAVIVSWQPPLEANGKITAYILFYTLDKNIPIDDWIME-----T------ISGDRLTHQIMDLNL 78 (114)
T ss_dssp SCCEEEEEEECSSCSSCEEEEEECCSSCSSCCSEEEEEEESCSSSCTTTSEEE-----E------EETTCCEEEECSCCS
T ss_pred CCCcceEEEEccCCCCEEEEEECCCCCCCCceeEEEEEEEeCCCCCccceEEE-----E------ECCCceEEEEcCCCC
Confidence 46888988866434689999999875332 2467776644321 1111 0 011233579999999
Q ss_pred CCEEEEEecc------CCccceEEEECCCCCCCC
Q 012311 130 DTKYYYKIGS------GDSSREFWFQTPPKIDPD 157 (466)
Q Consensus 130 ~T~Y~Yrv~~------~~~s~~~~F~T~p~~g~~ 157 (466)
+|.|.+||.. +.+|+...|+|++.+.++
T Consensus 79 ~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pp~ 112 (114)
T 2ede_A 79 DTMYYFRIQARNSKGVGPLSDPILFRTLKVSGPS 112 (114)
T ss_dssp SCEEEEEEEEECSSCBCCCCCCEEEECCCSSCCC
T ss_pred CCEEEEEEEEEeCCcCcCCcccEEEEecCCCCCC
Confidence 9999999954 356888899999876543
|
| >4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A* | Back alignment and structure |
|---|
Probab=97.78 E-value=6.6e-05 Score=79.67 Aligned_cols=178 Identities=13% Similarity=0.067 Sum_probs=90.3
Q ss_pred CCCeEEEEEccCCCCCC-----------------cHHH----HHHHHHhCC-CEEEEcccccccccccccccchhHHHHH
Q 012311 157 DASYKFGIIGDLGQTYN-----------------SLST----LEHYMESGA-QTVLFLGDLSYADRYQFIDVGVRWDSWG 214 (466)
Q Consensus 157 ~~~~~f~v~GD~g~~~~-----------------~~~t----l~~~~~~~~-dfvl~~GDl~Y~~~~~~~d~~~~wd~~~ 214 (466)
...++|+.++|+|.... .... ++++.+..+ +++|.+||++...... . ........
T Consensus 23 ~~~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~~--~-~~~g~~~~ 99 (546)
T 4h2g_A 23 PWELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWF--T-VYKGAEVA 99 (546)
T ss_dssp CEEEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHH--H-HHTTHHHH
T ss_pred ceEEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCchhh--h-hhCChHHH
Confidence 35899999999985421 1222 334444456 5899999999532210 0 01112222
Q ss_pred HHHHHHhhcCCeEEcCCCceeeccCcCCcccccc-cccccccCCCCCCC----C--------CCCceEEEeeCCEE--EE
Q 012311 215 RFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFK-SYLHRYPTPHLASK----S--------SSPLWYAIRRASAH--II 279 (466)
Q Consensus 215 ~~~~~l~~~~P~~~~~GNHE~~~~~~~~~~~~f~-~y~~rf~~P~~~~~----~--------~~~~yYsf~~g~v~--fI 279 (466)
+.+..+ . +-+.++||||+++... .+. .+......|.-... . ....|.-++.++++ ||
T Consensus 100 ~~ln~l--g-~d~~~~GNHEfd~g~~-----~l~~~~~~~~~~~~l~aNv~~~~~~~p~~~~~~~~~~i~~~~G~kIgii 171 (546)
T 4h2g_A 100 HFMNAL--R-YDAMALGNHEFDNGVE-----GLIEPLLKEAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIV 171 (546)
T ss_dssp HHHHHH--T-CSEEECCGGGGTTHHH-----HHHTTTTTTCSSCEECSSEEECHHHHHHHBTTBBSEEEEEETTEEEEEE
T ss_pred HHHHhc--C-CcEEeccCcccccCHH-----HHHHHHHhhcCCCEEEEEeecCCCCCccccccCCCeEEEEECCEEEEEE
Confidence 333332 2 3367899999864311 011 11111111111000 0 12346668888754 55
Q ss_pred EEcCCC------CC-C-CChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEE
Q 012311 280 VLSSYS------PF-V-KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRI 351 (466)
Q Consensus 280 ~Lds~~------~~-~-~~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~ 351 (466)
.+.+.. +- + ......+.+++.+++........+|++.|.+.... . .+..-+ -+||+++
T Consensus 172 G~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~~g~D~iI~l~H~g~~~d--------~----~la~~~--~giDlIl 237 (546)
T 4h2g_A 172 GYTSKETPFLSNPGTNLVFEDEITALQPEVDKLKTLNVNKIIALGHSGFEMD--------K----LIAQKV--RGVDVVV 237 (546)
T ss_dssp EEECTTHHHHSCCCSSEEECCHHHHHHHHHHHHHHTTCCCEEEEEESCHHHH--------H----HHHHHS--TTCCEEE
T ss_pred EecccccccccCCCCCcEEccHHHHHHHHHHHHHhcCCCEEEEEeccCccch--------H----HHHHhC--CCCcEEE
Confidence 555421 10 1 01123344444444433245778999999875320 1 121112 4899999
Q ss_pred ecccceec
Q 012311 352 SNLHYNIS 359 (466)
Q Consensus 352 ~gh~~~~~ 359 (466)
+||.|.+.
T Consensus 238 gGHtH~~~ 245 (546)
T 4h2g_A 238 GGHSNTFL 245 (546)
T ss_dssp CCSSCCCC
T ss_pred eCCcCccc
Confidence 99998654
|
| >3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A* | Back alignment and structure |
|---|
Probab=97.75 E-value=0.00012 Score=78.17 Aligned_cols=178 Identities=15% Similarity=0.082 Sum_probs=90.5
Q ss_pred CCCeEEEEEccCCCCCCc------------------HHH----HHHHHHhCCC-EEEEcccccccccccccccchhHHHH
Q 012311 157 DASYKFGIIGDLGQTYNS------------------LST----LEHYMESGAQ-TVLFLGDLSYADRYQFIDVGVRWDSW 213 (466)
Q Consensus 157 ~~~~~f~v~GD~g~~~~~------------------~~t----l~~~~~~~~d-fvl~~GDl~Y~~~~~~~d~~~~wd~~ 213 (466)
...++|+.++|+|..... ... ++++.+..++ ++|..||++....... .......
T Consensus 10 ~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~~---~~~g~~~ 86 (579)
T 3ztv_A 10 AVELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYFT---LFGGSAD 86 (579)
T ss_dssp CEEEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHHH---TTTTHHH
T ss_pred ceEEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceeee---ecCCHHH
Confidence 457999999999954221 222 3344444666 8899999996432110 0112222
Q ss_pred HHHHHHHhhcCCeEEcCCCceeeccCcCCcccccccccccccCCCCC------CCC----CCCceEEEeeCC--EEEEEE
Q 012311 214 GRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLA------SKS----SSPLWYAIRRAS--AHIIVL 281 (466)
Q Consensus 214 ~~~~~~l~~~~P~~~~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~~~------~~~----~~~~yYsf~~g~--v~fI~L 281 (466)
.+.+..+ . +-++++||||+++... .+..+......|.-. .+. .-..|--++.++ +-||.+
T Consensus 87 ~~~ln~l--g-~D~~tlGNHEfd~G~~-----~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~i~~~~G~kIgviG~ 158 (579)
T 3ztv_A 87 AAVMNAG--N-FHYFTLGNHEFDAGNE-----GLLKLLEPLKIPVLSANVIPDKSSILYNKWKPYDIFTVDGEKIAIIGL 158 (579)
T ss_dssp HHHHHHH--T-CSEEECCSGGGTTHHH-----HHHHHHTTCCSCEECSSEEECTTSTTTTSCBSEEEEEETTEEEEEEEE
T ss_pred HHHHHhc--C-cCeeeccccccccCHH-----HHHHHHHhcCCCeeeeeEeccCCcccccccCCeEEEEECCEEEEEEEE
Confidence 3333332 2 3357899999864310 111111111111100 000 112456678887 556666
Q ss_pred cC-C------CCC-C-CChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEe
Q 012311 282 SS-Y------SPF-V-KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRIS 352 (466)
Q Consensus 282 ds-~------~~~-~-~~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~ 352 (466)
.+ . ... + ......+-+++.+++........+|++.|.+.-. .. .+..-+ -|||++++
T Consensus 159 t~~~~~~~~~~p~~~~~f~d~~~~~~~~v~~lk~~g~d~iI~l~H~G~~~--------d~----~la~~~--~giDlIlg 224 (579)
T 3ztv_A 159 DTVNKTVNSSSPGKDVKFYDEIATAQIMANALKQQGINKIILLSHAGSEK--------NI----EIAQKV--NDIDVIVT 224 (579)
T ss_dssp ECSHHHHHHSCCCTTEEECCHHHHHHHHHHHHHTTTCCCEEEEEETCHHH--------HH----HHHHHC--SSCCEEEE
T ss_pred EcCCccccccCCCCCceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh--------hH----HHHHhC--CCCCEEEe
Confidence 43 1 110 1 0112334455554444324577899999987521 01 111112 38999999
Q ss_pred cccceec
Q 012311 353 NLHYNIS 359 (466)
Q Consensus 353 gh~~~~~ 359 (466)
||.|...
T Consensus 225 GHtH~~~ 231 (579)
T 3ztv_A 225 GDSHYLY 231 (579)
T ss_dssp CSSCCEE
T ss_pred CCCCccc
Confidence 9998765
|
| >2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00054 Score=57.54 Aligned_cols=82 Identities=21% Similarity=0.134 Sum_probs=56.0
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC--------CcEEEEeecCCC--CceEEEeEEEEeeeeccccceEEEEEecC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG--------PSTVSYGTSADK--FDFTAEGTVNNYTFYKYKSGYIHQCLVDG 126 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~--------~~~V~yg~~~~~--~~~~a~g~~~~y~~~~~~~~~~h~v~l~g 126 (466)
.+|..|++.... .+++.|+|.-+.... .-.|+|...... ....+.+ ....++|+|
T Consensus 20 ~~P~~l~~~~~s--~tsi~lsW~~p~~~~~~i~~~~~~Y~v~y~~~~~~~~~~~~~~~-------------~~~~~~v~g 84 (123)
T 2edd_A 20 LPPVGVQAVALT--HDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAKYKSEDT-------------TSLSYTATG 84 (123)
T ss_dssp CCCEEEEEEEEE--TTEEEEEEECSSSCSSCCCSCCCCEEEEEEETTCTTCCCCCEEE-------------SSSEEEEES
T ss_pred CCCcceEEEEcC--CCeEEEEecCCCCCcccccCcCceEEEEEEECCCCCccEEEEeC-------------CceEEEecC
Confidence 578898886553 589999999654322 346788775321 1111111 123579999
Q ss_pred CCCCCEEEEEecc------CCccceEEEECCCC
Q 012311 127 LEYDTKYYYKIGS------GDSSREFWFQTPPK 153 (466)
Q Consensus 127 L~P~T~Y~Yrv~~------~~~s~~~~F~T~p~ 153 (466)
|+|+|.|.++|.. +.+|....|+|.+.
T Consensus 85 L~P~T~Y~f~V~A~n~~g~g~~S~~v~~~T~~~ 117 (123)
T 2edd_A 85 LKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEA 117 (123)
T ss_dssp CCTTCEEEEEEEECCSSSCCCCCCCEEEECCCS
T ss_pred CCCCCEEEEEEEEeCCCcccCCCCCEEEEccCC
Confidence 9999999999954 25788889999876
|
| >3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A* | Back alignment and structure |
|---|
Probab=97.64 E-value=0.00049 Score=72.34 Aligned_cols=187 Identities=13% Similarity=0.064 Sum_probs=89.3
Q ss_pred CCeEEEEEccCCCCCC---------------cHHH----HHHHHHhCCCEEEE-cccccccccccccccchhHHHHHHHH
Q 012311 158 ASYKFGIIGDLGQTYN---------------SLST----LEHYMESGAQTVLF-LGDLSYADRYQFIDVGVRWDSWGRFV 217 (466)
Q Consensus 158 ~~~~f~v~GD~g~~~~---------------~~~t----l~~~~~~~~dfvl~-~GDl~Y~~~~~~~d~~~~wd~~~~~~ 217 (466)
..++|+.++|+|.... .... ++++.+.+++.+++ +||++...... . ...+. ..+
T Consensus 5 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~g~~~~--~-~~~g~---~~~ 78 (509)
T 3ive_A 5 KDVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGPYIS--S-LTKGK---AII 78 (509)
T ss_dssp EEEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHH--H-TTTTH---HHH
T ss_pred eEEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCCCchhh--h-hcCCh---HHH
Confidence 4689999999985321 1222 33444457887665 99998532110 0 01112 223
Q ss_pred HHHhhcCCeEEcCCCceeeccCcCCcccccccccccccCCCC-------CCCC-C-CCceEEEeeCC--EEEEEEcCC--
Q 012311 218 ERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHL-------ASKS-S-SPLWYAIRRAS--AHIIVLSSY-- 284 (466)
Q Consensus 218 ~~l~~~~P~~~~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~~-------~~~~-~-~~~yYsf~~g~--v~fI~Lds~-- 284 (466)
+.+..--+-++++||||+++... .+..+......|.- ..+. . ...|.-++.++ +-||.+-+.
T Consensus 79 ~~ln~lg~D~~tlGNHEfd~G~~-----~l~~~l~~~~~p~l~aNv~~~~~~~p~~~~py~i~e~~G~kIgiiG~t~~~~ 153 (509)
T 3ive_A 79 DIMNTMPFDAVTIGNHEFDHGWD-----NTLLQLSQAKFPIVQGNIFYQNSSKSFWDKPYTIIEKDGVKIGVIGLHGVFA 153 (509)
T ss_dssp HHHTTSCCSEECCCGGGGTTCHH-----HHHHHHTTCSSCBCCCSEEETTSCCBSSSCSEEEEEETTEEEEEEEEECHHH
T ss_pred HHHHhcCCcEEeecccccccCHH-----HHHHHHhhCCCCEEEEEEEECCCCCccCcCCeEEEEECCEEEEEEecccCcc
Confidence 33322234567899999865311 01111111111110 0000 0 23466778887 455666321
Q ss_pred -----CC---CC-CChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCcccc----cCHHHHHHHHHHHHHcCCcEEE
Q 012311 285 -----SP---FV-KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFM----EGESMRAAFESWFVRYKVDYRI 351 (466)
Q Consensus 285 -----~~---~~-~~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~----~~~~~r~~l~~ll~~y~Vd~~~ 351 (466)
.. .+ ......+.+++.+++... +..-+|++.|.+.-........ .+...-.++...+ -+||+++
T Consensus 154 ~~~~~~~~~~~g~~~~d~~~~~~~~v~~Lk~-~~D~iIvl~H~G~~~~~~~~~~~~~~~~~~~d~~la~~~--~giDlIl 230 (509)
T 3ive_A 154 FNDTVSAATRVGIEARDEIKWLQRYIDELKG-KVDLTVALIHEGVPARQSSMGGTDVRRALDKDIQTASQV--KGLDILI 230 (509)
T ss_dssp HHHHSCGGGCTTEEECCHHHHHHHHHHHHTT-TCSEEEEEEECSSCCCCCCC---CCCCCCHHHHHHHHHC--SSCCEEE
T ss_pred cccccccccCCCCEEcCHHHHHHHHHHHHHh-cCCEEEEEeccCcCCccccccccccccccchHHHHHhcC--CCCcEEE
Confidence 00 01 112234445555544432 3778999999985321110000 0011111222222 3899999
Q ss_pred eccccee
Q 012311 352 SNLHYNI 358 (466)
Q Consensus 352 ~gh~~~~ 358 (466)
+||.|..
T Consensus 231 gGHtH~~ 237 (509)
T 3ive_A 231 TGHAHVG 237 (509)
T ss_dssp EESSCCC
T ss_pred eCCcCcc
Confidence 9999853
|
| >1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=97.60 E-value=0.0019 Score=62.34 Aligned_cols=187 Identities=17% Similarity=0.030 Sum_probs=96.8
Q ss_pred CeEEEEEccCCCCCCc---HHHHHHHHHh-CCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCce
Q 012311 159 SYKFGIIGDLGQTYNS---LSTLEHYMES-GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHE 234 (466)
Q Consensus 159 ~~~f~v~GD~g~~~~~---~~tl~~~~~~-~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE 234 (466)
.+|++.+||....... ...+.++.+. ++|+++..||.+...... ...-.+.+..+ .+- ..+.||||
T Consensus 4 ~m~ilf~GDv~G~~G~~~l~~~l~~lr~~~~~d~vi~Ngen~~gG~g~-------~~~~~~~ln~~--G~D-a~TlGNHe 73 (281)
T 1t71_A 4 SIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGKGL-------SLKHYEFLKEA--GVN-YITMGNHT 73 (281)
T ss_dssp CCEEEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTTTSSC-------CHHHHHHHHHH--TCC-EEECCTTT
T ss_pred eEEEEEECCcCChHHHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCc-------CHHHHHHHHhc--CCC-EEEEccCc
Confidence 5799999998743211 1224455444 789999999998643211 12222333322 223 46789999
Q ss_pred eeccCcCCccccccccc---ccccCCCCCCCC-CCCceEEEeeCCEE--EEEEcCCCCCC--CChHHHHHHHHHHhhccC
Q 012311 235 IEYMTYMGEVVPFKSYL---HRYPTPHLASKS-SSPLWYAIRRASAH--IIVLSSYSPFV--KYTPQWEWLREELKKVDR 306 (466)
Q Consensus 235 ~~~~~~~~~~~~f~~y~---~rf~~P~~~~~~-~~~~yYsf~~g~v~--fI~Lds~~~~~--~~~~Q~~WL~~~L~~~~r 306 (466)
+++.++ ..+|-.-. .--++|...... .+.-|.-++.+++. +|.|-+...+. ....-.+-+++.++ +
T Consensus 74 fD~g~~---~~~~l~~~~~v~~aN~p~~~~~~~~g~g~~I~e~~G~kIgVIgl~g~~~f~~~~~~~pf~~a~~~v~---~ 147 (281)
T 1t71_A 74 WFQKLD---LAVVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNPFKVLKELIL---K 147 (281)
T ss_dssp TCCGGG---HHHHTTCTTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCCHHHHHHHHHT---T
T ss_pred ccCCcc---HHHHhhhcCEEeeccCCcccccccCCCCeEEEEECCEEEEEEEeeccccccCccccCHHHHHHHHHh---h
Confidence 986421 11110000 001122211000 23356678888744 55554432122 11222444566565 3
Q ss_pred CCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccceecCCcccccCCCCCcEEEE
Q 012311 307 EKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYNISSGDCFPVPDKSAPVYIT 376 (466)
Q Consensus 307 ~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~~~~~~~~~~~~~g~vyiv 376 (466)
.+++.+||.+|.-. ....+.+.. ...-+||+++.+|.|-...+.. .-++|+.||+
T Consensus 148 ~~~diIIv~~H~g~-----------t~Ek~~la~-~~dg~VD~VvGgHTHv~t~d~~---il~~gt~~i~ 202 (281)
T 1t71_A 148 RDCDLHIVDFHAET-----------TSEKNAFCM-AFDGYVTTIFGTHTHVPSADLR---ITPKGSAYIT 202 (281)
T ss_dssp CCCSEEEEEEECSC-----------HHHHHHHHH-HHTTTSSEEEEESSSSCCTTCE---ECTTSCEEES
T ss_pred cCCCEEEEEeCCCc-----------hHHHHHHHH-hCCCCeEEEEeCCCCcCCCceE---EecCCcEEEe
Confidence 57889999999411 111222332 2234699999999985443221 1237888887
|
| >2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00057 Score=55.38 Aligned_cols=83 Identities=14% Similarity=0.202 Sum_probs=55.7
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCCC----cEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPGP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~~----~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~ 132 (466)
.+|..+.+.......+++.|+|.-+..... -.|+|....+..+..... .. ..++|++|+|+|.
T Consensus 9 ~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~-----------~~--~~~~l~~L~p~t~ 75 (108)
T 2dm4_A 9 DAPRNLQLSLPREAEGVIVGHWAPPIHTHGLIREYIVEYSRSGSKMWASQRA-----------AS--NFTEIKNLLVNTL 75 (108)
T ss_dssp TSCEEEEEECCTTCSSCEEEEEECCSCCSSCEEEEEEEEEETTCSCCEEEEE-----------SS--SEEEECSCCSSCE
T ss_pred cCCcCeEEEEeccCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCeEEecC-----------Cc--cEEEeCCCCCCCE
Confidence 368888877643346799999998753322 356676665433332211 11 1578999999999
Q ss_pred EEEEeccC------CccceEEEECCC
Q 012311 133 YYYKIGSG------DSSREFWFQTPP 152 (466)
Q Consensus 133 Y~Yrv~~~------~~s~~~~F~T~p 152 (466)
|.+||..- .+|+...|+|.+
T Consensus 76 Y~~~V~A~n~~G~g~~S~~~~~~T~~ 101 (108)
T 2dm4_A 76 YTVRVAAVTSRGIGNWSDSKSITTIK 101 (108)
T ss_dssp EEEEEEEEESSCEEEECCCEEEECCS
T ss_pred EEEEEEEECCCceeCCCCCEEEECCC
Confidence 99999652 467888899964
|
| >1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00059 Score=55.40 Aligned_cols=84 Identities=18% Similarity=0.341 Sum_probs=55.4
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCCC----CcEEEEeecCCCCc--eEEEeEEEEeeeeccccceEEEEEecCCCCCC
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFD--FTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~~----~~~V~yg~~~~~~~--~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T 131 (466)
.|..+++... ..+++.|+|..+...+ .-.|+|........ ....+ ....++|++|+|+|
T Consensus 13 ~P~~l~~~~~--~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~-------------~~~~~~i~~L~p~t 77 (111)
T 1x5l_A 13 QVVVIRQERA--GQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYSTLKA-------------VTTRATVSGLKPGT 77 (111)
T ss_dssp CCCCEECSCB--CSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSSCEEEEE-------------SSSEEEECSCCTTC
T ss_pred CCceEEEEEc--CCCEEEEEECCCCCCCCEEEEEEEEEEECCCCceeEEEecC-------------CCCEEEEcCCCCCC
Confidence 4666665543 3579999998774332 23577776542211 11111 12357899999999
Q ss_pred EEEEEecc------CCccceEEEECCCCCCC
Q 012311 132 KYYYKIGS------GDSSREFWFQTPPKIDP 156 (466)
Q Consensus 132 ~Y~Yrv~~------~~~s~~~~F~T~p~~g~ 156 (466)
.|.+||.. +.+|+...|+|++.+++
T Consensus 78 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~p 108 (111)
T 1x5l_A 78 RYVFQVRARTSAGCGRFSQAMEVETGKPSGP 108 (111)
T ss_dssp EEEECEEEEETTEECCCCCCEEEECCCTTSC
T ss_pred EEEEEEEEEeCCcCCCCcccEEEEcCCCCCC
Confidence 99999964 35788999999987654
|
| >1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00044 Score=56.08 Aligned_cols=83 Identities=19% Similarity=0.317 Sum_probs=52.8
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~ 132 (466)
.+|..+.++... .+++.|+|..+...+ .-.|+|....+.......+ ....++|+||+|+|.
T Consensus 9 ~~P~~~~~~~~s--~~sv~l~W~~p~~~g~~i~~Y~v~~~~~~~~~~~~~~~-------------~~~~~~v~~L~p~t~ 73 (106)
T 1x4x_A 9 DQCKPPQVTCRS--ATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSMQICYCG-------------PGLSYEIKGLSPATT 73 (106)
T ss_dssp CCCCCCCCEEEE--TTEEEEECCCCSCSSSCCCEEEEEEESSTTSCCEEEEE-------------SCSEEEEESCCSSCE
T ss_pred CCCCCCEEEEcC--CCEEEEEEcCCCCCCCcceEEEEEEEcCCCceEEEEeC-------------CcceEEEcCCCCCCE
Confidence 346666655443 579999998775422 2356676544322111111 112468899999999
Q ss_pred EEEEecc------CCccceEEEECCCCC
Q 012311 133 YYYKIGS------GDSSREFWFQTPPKI 154 (466)
Q Consensus 133 Y~Yrv~~------~~~s~~~~F~T~p~~ 154 (466)
|.+||.. +.+|+...|+|++.+
T Consensus 74 Y~frV~A~n~~G~g~~S~~v~~~T~~~~ 101 (106)
T 1x4x_A 74 YYCRVQALSVVGAGPFSEVVACVTPPSS 101 (106)
T ss_dssp EEEEEEEECSSCCCCBCCCEEEECCCCC
T ss_pred EEEEEEEEcCCcCCCCcCCEEEECCCCC
Confidence 9999964 246888899998753
|
| >1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.46 E-value=0.0012 Score=54.02 Aligned_cols=87 Identities=13% Similarity=0.129 Sum_probs=56.0
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCC--C----CCcEEEEeecCCC---CceEEEeEEEEeeeeccccceEEEEEecCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHE--P----GPSTVSYGTSADK---FDFTAEGTVNNYTFYKYKSGYIHQCLVDGL 127 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~--~----~~~~V~yg~~~~~---~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL 127 (466)
.+|..+.+... ..+++.|+|.-+.. . ..-.|+|...... ..... .. .+-...++|++|
T Consensus 10 ~~P~~~~~~~~--~~~si~l~W~~p~~~~~~g~i~gY~v~y~~~~~~~~~~~~~~-----~~------~~~~~~~~i~~L 76 (114)
T 1x4y_A 10 AGPYITFTDAV--NETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKD-----MV------EGDRYWHSISHL 76 (114)
T ss_dssp SCCEEEEEECS--SSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCE-----EE------ETTCCEEEECSC
T ss_pred CCCeEEEEEec--CCCEEEEEEeCCCchhcCCccceEEEEEEECCCCCCcceeeE-----ec------CCcEeEEEcCCC
Confidence 46888877654 35799999998741 1 1236777655432 11100 00 011134789999
Q ss_pred CCCCEEEEEecc------CCccceEEEECCCCCCC
Q 012311 128 EYDTKYYYKIGS------GDSSREFWFQTPPKIDP 156 (466)
Q Consensus 128 ~P~T~Y~Yrv~~------~~~s~~~~F~T~p~~g~ 156 (466)
+|+|.|.+||.. +.+|+...|+|++.+.+
T Consensus 77 ~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~~~~p 111 (114)
T 1x4y_A 77 QPETSYDIKMQCFNEGGESEFSNVMICETKARSGP 111 (114)
T ss_dssp CTTCEEEEEEEEECTTCCCCCCCCEEEECCCCCCS
T ss_pred CCCCEEEEEEEEEcCCccCCCcCCEEEEeCCCCCC
Confidence 999999999954 35788889999876543
|
| >1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00016 Score=66.88 Aligned_cols=73 Identities=21% Similarity=0.219 Sum_probs=45.1
Q ss_pred eEEEEEccCCCCCCcH-HHHHHHHHhCCCEEEEcccccccccccccccchhH--HHHHHHHHHHhhcCCeEEcCCCceee
Q 012311 160 YKFGIIGDLGQTYNSL-STLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRW--DSWGRFVERSAAYQPWIWSAGNHEIE 236 (466)
Q Consensus 160 ~~f~v~GD~g~~~~~~-~tl~~~~~~~~dfvl~~GDl~Y~~~~~~~d~~~~w--d~~~~~~~~l~~~~P~~~~~GNHE~~ 236 (466)
+|++++||++...... ..++.+.+.++|+|+++||++...... +....| .+..+.++.+ ..|++.++||||..
T Consensus 26 mki~~iSD~H~~~~~l~~~l~~~~~~~~d~vi~~GDl~~~g~~~--~~~~~~~~~~~~~~l~~~--~~~v~~V~GNHD~~ 101 (208)
T 1su1_A 26 MKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPRN--ALPEGYAPAKVVERLNEV--AHKVIAVRGNCDSE 101 (208)
T ss_dssp CEEEEECCCTTBHHHHHHHHHHHHHHTCSEEEECSCCSCCCTTS--CCCTTBCHHHHHHHHHTT--GGGEEECCCTTCCH
T ss_pred EEEEEEEcCCCCHHHHHHHHHHHHhcCCCEEEECCCccccCccc--ccccccCHHHHHHHHHhc--CCceEEEECCCchH
Confidence 7999999999643222 223334445899999999999532210 001111 3334444433 25899999999975
|
| >2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00077 Score=54.53 Aligned_cols=85 Identities=15% Similarity=0.236 Sum_probs=53.9
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCCC-----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEPG-----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~~-----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~ 132 (466)
+|..+.+.... .+ +.|+|..+...+ .-.|+|.......+.... .... .......++|+||+|+|.
T Consensus 9 ~P~~~~~~~~~--~~-v~l~W~~P~~~~G~pi~~Y~v~~~~~~~~~~~~~~---~~~~----~~~~~~~~~i~~L~p~t~ 78 (105)
T 2haz_A 9 SPSIDQVEPYS--ST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKW---YDAK----EASMEGIVTIVGLKPETT 78 (105)
T ss_dssp CCEEEEEEECS--SC-EEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEEE---EEHH----HHHHHSEEEECSCCTTCE
T ss_pred CCCCCEEEEcC--Cc-EEEEEcCCcccCCccccEEEEEEEECCCCCCccce---EEcc----ccCCccEEEECCCCCCCE
Confidence 48777776553 34 999999874332 235778776543222110 0000 011223578999999999
Q ss_pred EEEEecc------CCccceEEEECCC
Q 012311 133 YYYKIGS------GDSSREFWFQTPP 152 (466)
Q Consensus 133 Y~Yrv~~------~~~s~~~~F~T~p 152 (466)
|.+||.. +..|+...|+|.|
T Consensus 79 Y~~rV~A~n~~G~g~~S~~~~~~T~p 104 (105)
T 2haz_A 79 YAVRLAALNGKGLGEISAASEFKTQP 104 (105)
T ss_dssp EEEEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEEEEEEcCCccCCCcCCEeeEEec
Confidence 9999964 3568888999987
|
| >2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00027 Score=56.53 Aligned_cols=81 Identities=23% Similarity=0.309 Sum_probs=51.6
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCC--CCC----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPH--EPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYD 130 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~--~~~----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~ 130 (466)
.+|..+.+... ..+++.|+|..+. ... .-.|+|....+.......+ ....++|+||+|+
T Consensus 10 ~~P~~l~~~~~--~~~si~l~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~~~~-------------~~~~~~i~~L~p~ 74 (103)
T 2edy_A 10 GFPQNLHVTGL--TTSTTELAWDPPVLAERNGRIISYTVVFRDINSQQELQNIT-------------TDTRFTLTGLKPD 74 (103)
T ss_dssp CCCEEEECSSB--CSSCEECEEECCCTTSCSSCCCEEEEEEEETTSCCEEEEEE-------------SSSCCEECSCCTT
T ss_pred CCCeeeEEEec--CCCEEEEEECCCCCcCCCCcEeEEEEEEEECCCCccEEEcC-------------CcceEEEcCCCCC
Confidence 45777776543 3579999999872 221 2357777665422211111 1123689999999
Q ss_pred CEEEEEecc------CCccceEEEECCC
Q 012311 131 TKYYYKIGS------GDSSREFWFQTPP 152 (466)
Q Consensus 131 T~Y~Yrv~~------~~~s~~~~F~T~p 152 (466)
|.|.+||.. +.+|+...|+|.|
T Consensus 75 t~Y~~~V~A~n~~G~g~~S~~~~~~T~p 102 (103)
T 2edy_A 75 TTYDIKVRAWTSKGSGPLSPSIQSRTMP 102 (103)
T ss_dssp CCEEEECCEECSSCBCCCCCCCCCCCCC
T ss_pred CEEEEEEEEECCCCCCCCCCCEEEEecc
Confidence 999999964 2467777788765
|
| >1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00059 Score=56.36 Aligned_cols=84 Identities=19% Similarity=0.126 Sum_probs=54.9
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC--------CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG--------PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLE 128 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~--------~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~ 128 (466)
.+|..|++..-. .+++.|+|.-+.... .-.|+|.......... .+ .......++|+||+
T Consensus 10 ~~P~~l~~~~~s--~tsi~lsW~~p~~~~~~~~~~~~~Y~v~y~~~~~~~~~~------~~-----~~~~~~~~~i~gL~ 76 (113)
T 1x5j_A 10 MPPVGVQASILS--HDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKY------KN-----ANATTLSYLVTGLK 76 (113)
T ss_dssp CCCEEEEEEEEE--TTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCCC------EE-----CCBCSSEEEEESCC
T ss_pred CCCcceEEEEec--CCEEEEEecCCCCccccccCcCceEEEEEEECCCCCeEE------EE-----EecCcCEEEeCCCC
Confidence 569999887654 589999999764321 2457777632111100 00 01112357999999
Q ss_pred CCCEEEEEecc------CCccceEEEECCCC
Q 012311 129 YDTKYYYKIGS------GDSSREFWFQTPPK 153 (466)
Q Consensus 129 P~T~Y~Yrv~~------~~~s~~~~F~T~p~ 153 (466)
|+|.|.++|.. +.+|....++|.+.
T Consensus 77 P~T~Y~f~V~A~~~~G~g~~S~~v~~~T~~~ 107 (113)
T 1x5j_A 77 PNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 107 (113)
T ss_dssp TTCEECCEEEEECSSCBCCCCCCCCEECCCS
T ss_pred CCcEEEEEEEEecCCccCCCcccEEeeccCC
Confidence 99999999964 25788888999875
|
| >1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.31 E-value=0.0016 Score=53.49 Aligned_cols=86 Identities=19% Similarity=0.287 Sum_probs=56.5
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCC-CCC----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPH-EPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~-~~~----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T 131 (466)
.+|..+++.... .+++.|+|..+. ..+ .-.|+|....+..+.... . .......++|++|+|+|
T Consensus 19 ~~P~~l~~~~~~--~~sv~l~W~~p~~~~~g~i~~Y~v~~~~~~~~~~~~~~----~------~~~~~~~~~i~~L~p~t 86 (120)
T 1x5f_A 19 SAPRDVVASLVS--TRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVEN----T------SHPGEMQVTIQNLMPAT 86 (120)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEEEE----C------SSTTCSEEEECSCCTTC
T ss_pred CCCCCcEEEecC--CCEEEEEECCCCCCCCCcEEEEEEEEEECCCCCceEEE----e------ccCCccEEEeCCCCCCC
Confidence 368888876553 578999999875 222 246778776533222110 0 11123457999999999
Q ss_pred EEEEEeccC------CccceEEEECCCCC
Q 012311 132 KYYYKIGSG------DSSREFWFQTPPKI 154 (466)
Q Consensus 132 ~Y~Yrv~~~------~~s~~~~F~T~p~~ 154 (466)
.|.+||..- .+|+...|+|.+..
T Consensus 87 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 115 (120)
T 1x5f_A 87 VYIFRVMAQNKHGSGESSAPLRVETQPES 115 (120)
T ss_dssp EEEEEEEEECSSCEEEECCCEEEECCCCC
T ss_pred EEEEEEEEECCCccCCCCCCEEEEeCCCC
Confidence 999999652 35778889997654
|
| >2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.003 Score=51.64 Aligned_cols=86 Identities=22% Similarity=0.301 Sum_probs=56.0
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCCC----cEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPGP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~~----~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~ 132 (466)
.+|..+++.... .+++.|+|.-+...+. -.|+|....+....... . .......++|++|+|+|.
T Consensus 19 ~~P~~l~~~~~~--~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~----~------~~~~~~~~~i~~L~p~t~ 86 (119)
T 2ed7_A 19 SAPRDVVPVLVS--SRFVRLSWRPPAEAKGNIQTFTVFFSREGDNRERALN----T------TQPGSLQLTVGNLKPEAM 86 (119)
T ss_dssp CCCSCCEEEEEC--SSCEEEECCCCSCCSSCEEEEEEEEEESSCCCCEEEE----C------CCTTCCEEEECSCCSSSE
T ss_pred cCCcceEEEecC--CCEEEEEEeCCCCCCCcEEEEEEEEEeCCCCcceeeE----e------ecCCceEEEeCCCCCCCE
Confidence 468888877643 5799999987654332 35666665443222111 0 011234579999999999
Q ss_pred EEEEecc------CCccceEEEECCCCC
Q 012311 133 YYYKIGS------GDSSREFWFQTPPKI 154 (466)
Q Consensus 133 Y~Yrv~~------~~~s~~~~F~T~p~~ 154 (466)
|.+||.. +.+|+...++|.+..
T Consensus 87 Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 114 (119)
T 2ed7_A 87 YTFRVVAYNEWGPGESSQPIKVATQPES 114 (119)
T ss_dssp EEECCEEEESSCBCSCCCCEEEECCCCS
T ss_pred EEEEEEEEcCCccCCCcCCEEEEeCCCC
Confidence 9999854 246788899998653
|
| >2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.28 E-value=0.001 Score=53.70 Aligned_cols=84 Identities=17% Similarity=0.250 Sum_probs=53.7
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCCCC----cEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEPGP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~~~----~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y 133 (466)
+|..+++.... .+++.|+|.-+...+. -.|+|....+....... . ......++|+||+|+|.|
T Consensus 10 ~P~~l~~~~~~--~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-----~------~~~~~~~~l~~L~p~t~Y 76 (108)
T 2djs_A 10 TVPIMHQVSAT--MRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSM-----A------RSQTNTARIDGLRPGMVY 76 (108)
T ss_dssp CCSCCEEEEEC--SSEEEEECCCCSCCSSCEEEEEEEEEETTSCSTTCEE-----E------EESSSEEEEESCCTTCEE
T ss_pred CCcceEEEecC--CCEEEEEECCCCCCCCeEEEEEEEEEECCCCCcceeE-----E------ecCccEEEEcCCCCCCEE
Confidence 57777665443 5799999998754432 34666665432221110 0 011134689999999999
Q ss_pred EEEeccC------CccceEEEECCCCC
Q 012311 134 YYKIGSG------DSSREFWFQTPPKI 154 (466)
Q Consensus 134 ~Yrv~~~------~~s~~~~F~T~p~~ 154 (466)
.+||..- .+|+...|+|++..
T Consensus 77 ~~~V~A~n~~G~g~~S~~~~~~T~~~~ 103 (108)
T 2djs_A 77 VVQVRARTVAGYGKFSGKMCFQTLTDS 103 (108)
T ss_dssp EEEEEEEESSCEEEECCCEEEECCCSS
T ss_pred EEEEEEEeCCEECCCCCCEEEEeCCCC
Confidence 9999652 46788899998764
|
| >1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.26 E-value=0.0013 Score=53.65 Aligned_cols=83 Identities=19% Similarity=0.362 Sum_probs=53.0
Q ss_pred CCceEEEeeecCCCCcEEEEE--EcCCCCC---CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCE
Q 012311 58 SPQQVHITQGDYDGKAVIISW--VTPHEPG---PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W--~t~~~~~---~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~ 132 (466)
.|..+++.... .+++.|+| .-+...+ .-.|+|....+ . ..+.. .... ++|+||+|+|.
T Consensus 12 ~p~~l~~~~~~--~~sv~l~W~~~~P~~~ng~~~Y~v~y~~~~~----~-----~~~~~-~~~~-----~~i~~L~p~t~ 74 (107)
T 1x5a_A 12 SGLSLKLVKKE--PRQLELTWAGSRPRNPGGNLSYELHVLNQDE----E-----WHQMV-LEPR-----VLLTKLQPDTT 74 (107)
T ss_dssp CSCCCCEEEEE--TTEEEEECCCCCSSCCSSCCEEEEEEECSSC----E-----EEEEE-SSSE-----EEEESCCSSCE
T ss_pred CCCceEEEecC--CCEEEEEECCCCCCCCCCceEEEEEEEeCCC----C-----ceEEE-ecce-----EEECCCCCCCE
Confidence 46666665443 57999999 6654332 23466655411 0 01110 0111 89999999999
Q ss_pred EEEEecc------CCccceEEEECCCCCCCC
Q 012311 133 YYYKIGS------GDSSREFWFQTPPKIDPD 157 (466)
Q Consensus 133 Y~Yrv~~------~~~s~~~~F~T~p~~g~~ 157 (466)
|.+||.. +.+|+...|+|.+.+|+.
T Consensus 75 Y~f~V~A~~~~G~g~~S~~~~~~T~~~~gp~ 105 (107)
T 1x5a_A 75 YIVRVRTLTPLGPGPFSPDHEFRTSPPSGPS 105 (107)
T ss_dssp EEEEEEEECSSSCCCCCCCEEEECCCCSCCC
T ss_pred EEEEEEEECCCccCCCCCCEEEEECCCCCCC
Confidence 9999964 357888899999877654
|
| >2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A | Back alignment and structure |
|---|
Probab=97.25 E-value=0.0082 Score=56.89 Aligned_cols=187 Identities=14% Similarity=0.117 Sum_probs=95.4
Q ss_pred eEEEEEccCCCCCCc---HHHHHHHHHhCCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCceee
Q 012311 160 YKFGIIGDLGQTYNS---LSTLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIE 236 (466)
Q Consensus 160 ~~f~v~GD~g~~~~~---~~tl~~~~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~~ 236 (466)
.|++++||.=....- ...+.++.+.. |+++.-|..+...... . ..-.+.+..+ .+-. .+.||||++
T Consensus 1 m~ilfiGDi~g~~G~~~v~~~l~~lr~~~-d~vi~ngen~~~G~g~----~---~~~~~~l~~~--G~D~-~T~GNHefD 69 (252)
T 2z06_A 1 MRVLFIGDVMAEPGLRAVGLHLPDIRDRY-DLVIANGENAARGKGL----D---RRSYRLLREA--GVDL-VSLGNHAWD 69 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHGGGC-SEEEEECTTTTTTSSC----C---HHHHHHHHHH--TCCE-EECCTTTTS
T ss_pred CEEEEEEecCCcccHHHHHHHHHHHHhhC-CEEEEeCCCccCCCCc----C---HHHHHHHHhC--CCCE-EEeccEeeE
Confidence 478999997322211 12234444446 9988777766532211 1 2223333322 4444 478999997
Q ss_pred ccCcCCccccccccccc--ccCCCCCC-CCCCCceEEEeeCCEEEEEEc--CCCCCCCChHHHHHHHHHHhhccCCCCCe
Q 012311 237 YMTYMGEVVPFKSYLHR--YPTPHLAS-KSSSPLWYAIRRASAHIIVLS--SYSPFVKYTPQWEWLREELKKVDREKTPW 311 (466)
Q Consensus 237 ~~~~~~~~~~f~~y~~r--f~~P~~~~-~~~~~~yYsf~~g~v~fI~Ld--s~~~~~~~~~Q~~WL~~~L~~~~r~~~~w 311 (466)
.. +.. .|... .-.|.|-+ +.....|.-++.++..+-+++ ..........-.+-+++.+++.. ++.
T Consensus 70 ~~----~l~---~~l~~~~~vrpaN~~~~~pg~~~~i~~~~G~kIgVi~l~g~~~~~~~~~pf~~~~~~v~~lk---~d~ 139 (252)
T 2z06_A 70 HK----EVY---ALLESEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRLLEEEK---ADY 139 (252)
T ss_dssp CT----THH---HHHHHSSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHHHHHHCC---CSE
T ss_pred Cc----hHH---HHhccCCceEeecCCCCCCCCCeEEEEECCEEEEEEEcccccCccccCCHHHHHHHHHHHhC---CCE
Confidence 53 211 12111 11122211 122356778899886665554 32211111112333566666542 788
Q ss_pred EEEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccceecCCcccccCCCCCcEEEE-eCCCCC
Q 012311 312 LIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYNISSGDCFPVPDKSAPVYIT-VGDGGN 382 (466)
Q Consensus 312 ~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~~~~~~~~~~~~~g~vyiv-~G~gG~ 382 (466)
+||.+|.-. ...++++. .+..-+||+++.+|.|-...... .-++|+.||+ .|..|.
T Consensus 140 IIv~~H~g~-----------tsek~~la-~~~dg~Vd~VvGgHTHv~t~d~~---il~~gt~~itd~G~~G~ 196 (252)
T 2z06_A 140 VLVEVHAEA-----------TSEKMALA-HYLDGRASAVLGTHTHVPTLDAT---RLPKGTLYQTDVGMTGT 196 (252)
T ss_dssp EEEEEECSC-----------HHHHHHHH-HHHBTTBSEEEEESSCSCBSCCE---ECTTSCEEESCCCCBEE
T ss_pred EEEEeCCCc-----------HHHHHHHH-HhCCCCeEEEEcCCCCcCCCccE---EcCCCcEeecCCccccc
Confidence 999999521 11122233 22334699999999985433221 2247889987 344443
|
| >2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.0014 Score=53.22 Aligned_cols=83 Identities=17% Similarity=0.300 Sum_probs=54.9
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCCC----CcEEEEeecCCC--C-ceEEEeEEEEeeeeccccceEEEEEecCCCCC
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADK--F-DFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYD 130 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~~----~~~V~yg~~~~~--~-~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~ 130 (466)
.|..+++.... .+++.|+|.-+...+ .-.|+|....+. . ...... .. ..++|+||+|+
T Consensus 10 ~p~~l~~~~~~--~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~-----------~~--~~~~i~~L~p~ 74 (109)
T 2e7h_A 10 AVSDIRVTRSS--PSSLSLAWAVPRAPSGAVLDYEVKYHEKGAEGPSSVRFLKT-----------SE--NRAELRGLKRG 74 (109)
T ss_dssp CCCCCEEEEEE--TTEEEEECCCCCCSSSCCCEEEEEEEETTCCSTTTSEEEEE-----------SS--SEEEEESCCTT
T ss_pred CCCccEEEecC--CCEEEEEeCCCCCCCCcEeEEEEEEEECCCCCCceeEEEcc-----------CC--CEEEECCCCCC
Confidence 47777776543 579999998875332 246777765421 1 111111 11 15789999999
Q ss_pred CEEEEEecc------CCccceEEEECCCCCC
Q 012311 131 TKYYYKIGS------GDSSREFWFQTPPKID 155 (466)
Q Consensus 131 T~Y~Yrv~~------~~~s~~~~F~T~p~~g 155 (466)
|.|.+||.. +.+|+...|+|.+...
T Consensus 75 t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~ 105 (109)
T 2e7h_A 75 ASYLVQVRARSEAGYGPFGQEHHSQTQLDSG 105 (109)
T ss_dssp SCEEEEEEEECSSCBCCCCSCEECCCCCCSS
T ss_pred CeEEEEEEEEeCCccCCCCCCEEEEcCCCCC
Confidence 999999954 3578888999998643
|
| >1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0012 Score=53.87 Aligned_cols=83 Identities=14% Similarity=0.276 Sum_probs=55.2
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~ 132 (466)
..|..+++.... .+++.|+|..+...+ .-.|+|....+.....+... ...++|+||+|+|.
T Consensus 19 ~~P~~l~~~~~~--~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-------------~~~~~i~~L~p~t~ 83 (116)
T 1x5g_A 19 GPAPNLRAYAAS--PTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQDVDVS-------------SHSYTINGLKKYTE 83 (116)
T ss_dssp CCCSSCEEEEEE--TTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCCCEEEC-------------SSEEEECSCCTTCE
T ss_pred cCCCccEEEecC--CCEEEEEEeCCCCCCCcccEEEEEEEECCCCccEEEecC-------------CceEEEcCCCCCCE
Confidence 357788776543 579999998764322 24677776654333222111 13578999999999
Q ss_pred EEEEecc------CCccceEEEECCCCC
Q 012311 133 YYYKIGS------GDSSREFWFQTPPKI 154 (466)
Q Consensus 133 Y~Yrv~~------~~~s~~~~F~T~p~~ 154 (466)
|.+||.. +.+|+...|+|.+..
T Consensus 84 Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 111 (116)
T 1x5g_A 84 YSFRVVAYNKHGPGVSTPDVAVRTLSDS 111 (116)
T ss_dssp EEEEEEEECSSCCCCBCCCCCEECCCSS
T ss_pred EEEEEEEEcCCCcCCCCCCEEEECCCCC
Confidence 9999954 246777889998653
|
| >2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0022 Score=51.55 Aligned_cols=81 Identities=12% Similarity=0.118 Sum_probs=54.0
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCCC----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~~----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y 133 (466)
+|..+++.... .+++.|+|..+...+ .-.|+|............. . ...++|++|+|+|.|
T Consensus 10 ~P~~l~~~~~~--~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~-----------~--~~~~~i~~L~p~t~Y 74 (106)
T 2ed8_A 10 PVENLQAVSTS--PTSILITWEPPAYANGPVQGYRLFCTEVSTGKEQNIEV-----------D--GLSYKLEGLKKFTEY 74 (106)
T ss_dssp CCEEEEEECSS--TTEEEEEEECCSSCSSCCCEEEEEEEETTTCCEEEEEE-----------C--SSCEEEESCCTTCEE
T ss_pred CCceeEEEecC--CCEEEEEECCCCCCCCCeeEEEEEEEECCCCceEEEeC-----------C--ccEEEECCCCCCCEE
Confidence 68888876543 579999999874221 2467777655432222111 0 134689999999999
Q ss_pred EEEeccC------CccceEEEECCCC
Q 012311 134 YYKIGSG------DSSREFWFQTPPK 153 (466)
Q Consensus 134 ~Yrv~~~------~~s~~~~F~T~p~ 153 (466)
.+||..- ..|+...|+|.+.
T Consensus 75 ~~~V~A~n~~G~g~~S~~~~~~T~~~ 100 (106)
T 2ed8_A 75 SLRFLAYNRYGPGVSTDDITVVTLSD 100 (106)
T ss_dssp EEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EEEEEEEeCCccCCCcCCEEEEcCCC
Confidence 9999652 3577788999764
|
| >2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0027 Score=51.52 Aligned_cols=85 Identities=16% Similarity=0.197 Sum_probs=53.7
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCC-C----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEP-G----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~-~----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T 131 (466)
..|..+.+... ...+++.|+|..+... + .-.|+|....+..+..+.. +....++|++|+|+|
T Consensus 10 ~~P~~~~~~~~-~~~~sv~l~W~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~~~------------~~~~~~~v~~L~p~t 76 (110)
T 2crz_A 10 GPCLPPRLQGR-PKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVYQ------------GSEVECTVSSLLPGK 76 (110)
T ss_dssp CCCCCCEECSC-CCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEEEE------------ESCSEEEEESCCTTC
T ss_pred CCCCCceeccc-cCCCEEEEEeCCCCCCCCceeEEEEEEEEeCCCCceEEEEe------------CCcEEEEECCcCCCC
Confidence 35777776322 2357999999765321 1 2467777654433333210 012346889999999
Q ss_pred EEEEEecc------CCccceEEEECCCCC
Q 012311 132 KYYYKIGS------GDSSREFWFQTPPKI 154 (466)
Q Consensus 132 ~Y~Yrv~~------~~~s~~~~F~T~p~~ 154 (466)
.|.+||.. +.+|+...++|.+.+
T Consensus 77 ~Y~frV~A~n~~G~g~~S~~~~~~T~~~~ 105 (110)
T 2crz_A 77 TYSFRLRAANKMGFGPFSEKCDITTAPGS 105 (110)
T ss_dssp EEEECCEEECSSCBCCCCCCEEEECCCSC
T ss_pred EEEEEEEEEcCCccCCCCCccccccCCCC
Confidence 99999964 356788889998653
|
| >2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0026 Score=52.35 Aligned_cols=88 Identities=17% Similarity=0.222 Sum_probs=55.4
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCC--CCCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHE--PGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYY 134 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~--~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~ 134 (466)
.+|..+++.... .+++.|+|..+.. ...-.|+|....+...... .... .+....++|+||+|+|.|.
T Consensus 20 ~~P~~l~~~~~~--~~sv~l~W~~p~~g~i~~Y~v~~~~~~~~~~~~~---~~~~------~~~~~~~~i~~L~p~t~Y~ 88 (119)
T 2ee2_A 20 EAPTEVGVKVLS--SSEISVHWEHVLEKIVESYQIRYWAAHDKEEAAN---RVQV------TSQEYSARLENLLPDTQYF 88 (119)
T ss_dssp CCCCSCEEEEEE--TTEEEEECCCCSCTTCCEEEEEEEESSSCGGGCE---EEEE------ETTCSEEEECSCCTTCEEE
T ss_pred CCCCcEEEEEcc--CCEEEEEecCCCCCccceEEEEEEECCCcccCcE---EEEc------CCCEeEEEECCCCCCCEEE
Confidence 357777776543 5799999988753 1234677766543221100 0000 1122357899999999999
Q ss_pred EEecc------CCccceEEEECCCCCC
Q 012311 135 YKIGS------GDSSREFWFQTPPKID 155 (466)
Q Consensus 135 Yrv~~------~~~s~~~~F~T~p~~g 155 (466)
+||.. +.+|+...|+|.+.+.
T Consensus 89 ~~V~A~n~~G~g~~S~~~~~~T~~~~p 115 (119)
T 2ee2_A 89 IEVGACNSAGCGPPSDMIEAFTKKASG 115 (119)
T ss_dssp EEEEEECSSSCCCCCCCEEEECCCCCC
T ss_pred EEEEEEcCCccCCCCCCEEEECCCCCC
Confidence 99954 2467788899986643
|
| >2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0011 Score=54.27 Aligned_cols=73 Identities=18% Similarity=0.282 Sum_probs=47.6
Q ss_pred CCcEEEEEEcCCCCC----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEEEecc------C
Q 012311 71 GKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGS------G 140 (466)
Q Consensus 71 ~~~~~V~W~t~~~~~----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Yrv~~------~ 140 (466)
.+++.|+|.-+...+ .-.|+|....+..+..+. . +....++|+||+|+|.|.+||.. +
T Consensus 24 ~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~------~------~~~~~~~v~~L~p~t~Y~frV~A~n~~G~s 91 (110)
T 2db8_A 24 NNSATLSWKQPPLSTVPADGYILELDDGNGGQFREVY------V------GKETMCTVDGLHFNSTYNARVKAFNKTGVS 91 (110)
T ss_dssp SSEEEECCBCCTTCCSCCSEEEEEECCSSSSCCEEEE------E------ESCSCEEEECCCSSSCCEEEEEEECSSCBC
T ss_pred CCEEEEEECCCCCCCCCccEEEEEEEeCCCCceEEEE------e------CCcCEEEECCCCCCCEEEEEEEEEeCCcCC
Confidence 578999998775432 235777665432232221 0 01123688999999999999954 2
Q ss_pred CccceEEEECCCCCC
Q 012311 141 DSSREFWFQTPPKID 155 (466)
Q Consensus 141 ~~s~~~~F~T~p~~g 155 (466)
.+|+...|+|.+.+.
T Consensus 92 ~~S~~~~~~T~~~p~ 106 (110)
T 2db8_A 92 PYSKTLVLQTSEGSG 106 (110)
T ss_dssp CCCSCEECCCCCCCC
T ss_pred CCCCCEEEEcCCCCC
Confidence 467888999987653
|
| >1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=97.05 E-value=0.021 Score=54.17 Aligned_cols=189 Identities=14% Similarity=0.033 Sum_probs=94.5
Q ss_pred eEEEEEccCCCCCCcHHH----HHHHHHhCCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCcee
Q 012311 160 YKFGIIGDLGQTYNSLST----LEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEI 235 (466)
Q Consensus 160 ~~f~v~GD~g~~~~~~~t----l~~~~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~ 235 (466)
.|++++||.=... .... +.++.+.. |+++..|+.+...... . ..-.+.+..+ .+- ..+.||||+
T Consensus 1 m~ilf~GDv~g~~-G~~~~~~~l~~lr~~~-d~vi~nge~~~~G~g~----~---~~~~~~l~~~--G~D-a~TlGNHef 68 (255)
T 1t70_A 1 MRVLFIGDVFGQP-GRRVLQNHLPTIRPQF-DFVIVNMENSAGGFGM----H---RDAARGALEA--GAG-CLTLGNHAW 68 (255)
T ss_dssp CEEEEECCBBHHH-HHHHHHHHHHHHGGGC-SEEEEECTBTTTTSSC----C---HHHHHHHHHH--TCS-EEECCTTTT
T ss_pred CEEEEEeccCChH-HHHHHHHHHHHHHhhC-CEEEECCCCccCCcCC----C---HHHHHHHHhC--CCC-EEEeccccc
Confidence 4789999973211 1222 33343445 9998888887643221 1 1222333322 333 357799999
Q ss_pred eccCcCCcccccccccc-cccCCCCC--CCCCCCceEEEeeCCEE--EEEEcCCCCCCCChHHHHHHHHHHhhccCCCCC
Q 012311 236 EYMTYMGEVVPFKSYLH-RYPTPHLA--SKSSSPLWYAIRRASAH--IIVLSSYSPFVKYTPQWEWLREELKKVDREKTP 310 (466)
Q Consensus 236 ~~~~~~~~~~~f~~y~~-rf~~P~~~--~~~~~~~yYsf~~g~v~--fI~Lds~~~~~~~~~Q~~WL~~~L~~~~r~~~~ 310 (466)
+.. +..+|-.-.. +.-.|.|- ++..+.-|.-++.++.. +|.|-+.........-.+-+++.+++. +.+
T Consensus 69 D~~----~l~~~l~~~~~~~~~~aN~~~~~~pg~g~~I~~~~G~kIgVigl~g~~~~~~~~~p~~~~~~~v~~l---~~d 141 (255)
T 1t70_A 69 HHK----DIYPMLSEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMDALLERD---DLG 141 (255)
T ss_dssp SST----THHHHHHTTCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHHHHTTCS---SCC
T ss_pred cCc----hHHHHHhhCCCcEEEEeccCCCCCCCCCeEEEEECCEEEEEEEeecCcCcccccCHHHHHHHHHHHh---CCC
Confidence 752 1111100011 11113321 12223566778888754 454444321112222233466666654 577
Q ss_pred eEEEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccceecCCcccccCCCCCcEEEE-eCCCCC
Q 012311 311 WLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYNISSGDCFPVPDKSAPVYIT-VGDGGN 382 (466)
Q Consensus 311 w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~~~~~~~~~~~~~g~vyiv-~G~gG~ 382 (466)
.+||.+|.- .....+++.. ...-+||+++.+|.|-...+.. .-++|+.||+ .|..|.
T Consensus 142 ~IIv~~H~e-----------~t~Ek~~la~-~~dg~vd~VvGgHTHv~~~d~~---il~~gt~~i~d~G~~G~ 199 (255)
T 1t70_A 142 TVFVDFHAE-----------ATSEKEAMGW-HLAGRVAAVIGTHTHVPTADTR---ILKGGTAYQTDAGFTGP 199 (255)
T ss_dssp EEEEEEECS-----------CHHHHHHHHH-HHTTSSSEEEEESSCSCBSCCE---EETTTEEEESCCCCBEE
T ss_pred EEEEEeCCC-----------ChHHHHHHHH-hCCCCeEEEEeCCCCcCCCceE---EcCCCeEEEEcCccccc
Confidence 899999941 1112223332 2234599999999985443221 1137888887 344443
|
| >2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0049 Score=49.12 Aligned_cols=84 Identities=14% Similarity=0.238 Sum_probs=54.1
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCC--CCCcEEEEeecCCC-CceEEEeEEEEeeeeccccceEEEEEecCCCCCCEE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHE--PGPSTVSYGTSADK-FDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~--~~~~~V~yg~~~~~-~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y 133 (466)
..|..+.+.... .+++.|+|..+.. ...-.|+|...... .+..+.+ .....++|++|+|+|.|
T Consensus 9 ~~P~~~~~~~~~--~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~------------~~~~~~~i~~L~p~t~Y 74 (106)
T 2dju_A 9 KPPIDLVVTETT--ATSVTLTWDSGNSEPVTYYGIQYRAAGTEGPFQEVDG------------VATTRYSIGGLSPFSEY 74 (106)
T ss_dssp CCCEEEEEEEEE--TTEEEEEEECCCSSCCSEEEEEEEETTCCSCCCCBCC------------CCSSEEEEESCCTTCEE
T ss_pred cCCCCcEEEecc--CCEEEEEEcCCCCCCceEEEEEEEECCCCCCeEEccC------------CCccEEEEeCCCCCcEE
Confidence 368888776543 4799999997631 12346777665532 1211111 11124688999999999
Q ss_pred EEEecc------CCccceEEEECCCCC
Q 012311 134 YYKIGS------GDSSREFWFQTPPKI 154 (466)
Q Consensus 134 ~Yrv~~------~~~s~~~~F~T~p~~ 154 (466)
.+||.. +.+|+...++|.+..
T Consensus 75 ~~~V~A~n~~G~~~~S~~~~~~T~~~~ 101 (106)
T 2dju_A 75 AFRVLAVNSIGRGPPSEAVRARTGEQS 101 (106)
T ss_dssp EEEEEEECSSCBCCCCCCEEEECCCSS
T ss_pred EEEEEEEeCCccCCCcccEEeEcCCCC
Confidence 999964 246778889998753
|
| >3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0071 Score=64.10 Aligned_cols=195 Identities=11% Similarity=0.058 Sum_probs=90.7
Q ss_pred EECCCCCC-CCCCeEEEEEccCCCCCC-------------cHHHH----HHHH-HhCCC-EEEEcccccccccccccccc
Q 012311 148 FQTPPKID-PDASYKFGIIGDLGQTYN-------------SLSTL----EHYM-ESGAQ-TVLFLGDLSYADRYQFIDVG 207 (466)
Q Consensus 148 F~T~p~~g-~~~~~~f~v~GD~g~~~~-------------~~~tl----~~~~-~~~~d-fvl~~GDl~Y~~~~~~~d~~ 207 (466)
|-++|... ....++|+.++|+|.... ....+ +++. +.+++ ++|.+||++......... .
T Consensus 3 ~~s~p~~~~~~~~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~~~-~ 81 (557)
T 3c9f_A 3 LASFPHRNLTWNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDIT-S 81 (557)
T ss_dssp --CCCBCCCCCCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSS-S
T ss_pred cccCCCCCCCceEEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchhhc-c
Confidence 44455432 346899999999987521 01222 2222 23677 479999999532211000 0
Q ss_pred hhHHHHHHHHHHHhhcCCeEEcCCCceeeccCcCCcccccccccccccCCCCCC--------CC---CCCceEEEee--C
Q 012311 208 VRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLAS--------KS---SSPLWYAIRR--A 274 (466)
Q Consensus 208 ~~wd~~~~~~~~l~~~~P~~~~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~~~~--------~~---~~~~yYsf~~--g 274 (466)
.......+.+..+ . .=+.++||||+++... ....+.........|.-.+ +. ....|.-++. +
T Consensus 82 ~~g~~~~~~ln~l--g-~Da~tlGNHEfD~G~~--~l~~~~~~l~~a~fp~L~ANv~~~~~~g~~~~~~~py~I~e~~~~ 156 (557)
T 3c9f_A 82 PNGLKSTPIFIKQ--D-YDLLTIGNHELYLWEN--SKQEYETVVNHFQDKYVCSNVDIRLDNGLFVPLGLKYKYFTTPIR 156 (557)
T ss_dssp STTTTTHHHHTTS--C-CSEECCCGGGSSSHHH--HHHHHHHHHHHTTTTBBCSSEEEECTTSCEEESSBSCEEEECTTT
T ss_pred cCCHHHHHHHHhc--C-CCEEeecchhcccchH--HHHHHHHHHHhCCCCEEEeecccccccCCccccCCCeEEEEEccC
Confidence 0111112222221 2 3357899999975311 0001111111111221110 10 1234666787 7
Q ss_pred CE--EEEEEcCCCCC---C---CChHH---HHHHHHHHhhccCCCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHH
Q 012311 275 SA--HIIVLSSYSPF---V---KYTPQ---WEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFV 343 (466)
Q Consensus 275 ~v--~fI~Lds~~~~---~---~~~~Q---~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~ 343 (466)
++ -||.+.+...- + ....+ .+|+++.++ .+..-+||++|.+.-.... +.....+.+...+
T Consensus 157 G~kIgiiGlt~~~~~~~~~~~~~d~~e~i~~~~v~~l~~----~~~D~IIvL~H~G~~~~~d----~~~~~~~~lA~~~- 227 (557)
T 3c9f_A 157 GIRVMAFGFLFDFKRFNSGTRVTPMAETIHEPWFQEALK----HEVDLIIIVGHTPISHNWG----EFYQVHQYLRQFF- 227 (557)
T ss_dssp CCEEEEEECCCCCCCCCTTEEECCHHHHTTSHHHHHHTT----SCCSEEEEECSSCCCTTTC----HHHHHHHHHHHHC-
T ss_pred CEEEEEEEeecCCCCCCCCcEECCHHHHHHHHHHHHHHh----cCCCEEEEecccCccccCc----cccHHHHHHHHhC-
Confidence 64 55555442110 0 01112 247665443 3678899999988631010 1011112222221
Q ss_pred HcCCc-EEEeccccee
Q 012311 344 RYKVD-YRISNLHYNI 358 (466)
Q Consensus 344 ~y~Vd-~~~~gh~~~~ 358 (466)
-+|| +++.||.|..
T Consensus 228 -~giDilIlgGHtH~~ 242 (557)
T 3c9f_A 228 -PDTIIQYFGGHSHIR 242 (557)
T ss_dssp -TTSEEEEEECSSCCE
T ss_pred -CCCCEEEECCCCCCC
Confidence 5999 4999999854
|
| >2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0055 Score=51.38 Aligned_cols=83 Identities=16% Similarity=0.299 Sum_probs=52.0
Q ss_pred CCCc-eEEEeeecCCCCcEEEEEEcCCCCC-Cc-EEEEeecC-----------CCCceEEEeEEEEeeeeccccceEEEE
Q 012311 57 NSPQ-QVHITQGDYDGKAVIISWVTPHEPG-PS-TVSYGTSA-----------DKFDFTAEGTVNNYTFYKYKSGYIHQC 122 (466)
Q Consensus 57 ~~P~-qv~lt~~~~~~~~~~V~W~t~~~~~-~~-~V~yg~~~-----------~~~~~~a~g~~~~y~~~~~~~~~~h~v 122 (466)
.+|. .+++.... .++++|+|..+...+ .. .++|.... +..+..+.. . . ...+
T Consensus 17 ~~P~~~~~~~~~~--~~sv~L~W~~p~~~g~~~Y~~~Y~~~~~~~~~~~~~~~~~~w~~~~~-~---------~--~~~~ 82 (127)
T 2dmk_A 17 NPPSIREELCTAS--HDTITVHWISDDEFSISSYELQYTIFTGQANFISLYNSVDSWMIVPN-I---------K--QNHY 82 (127)
T ss_dssp CCCEEEEEEEEEE--TTEEEEEEECSCCSSEEEEEEEEEEESCCSCHHHHHHTGGGSEEEEE-E---------C--SSEE
T ss_pred cCCCCCCEEEeee--CCEEEEEECCCCCCCccceEEEEEEecccccccccccCCCCcEEeec-c---------c--CCeE
Confidence 4677 66666443 579999999886433 23 67786511 111222211 0 0 1135
Q ss_pred EecCCCCCCEEEEEeccC-----CccceEEEECCCC
Q 012311 123 LVDGLEYDTKYYYKIGSG-----DSSREFWFQTPPK 153 (466)
Q Consensus 123 ~l~gL~P~T~Y~Yrv~~~-----~~s~~~~F~T~p~ 153 (466)
+|+||+|+|+|.|||..- ..|....++|++.
T Consensus 83 ~v~gL~p~t~Y~frV~A~N~~G~~~S~~v~~~T~~~ 118 (127)
T 2dmk_A 83 TVHGLQSGTRYIFIVKAINQAGSRNSEPTRLKTNSQ 118 (127)
T ss_dssp EEESCCSSCEEEEEEEEEESSCEEECCCEEEECCSS
T ss_pred EECCCCCCCEEEEEEEEEeCCCCCCCcCeEeEeCCC
Confidence 889999999999999652 2466778899864
|
| >2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0045 Score=51.44 Aligned_cols=87 Identities=15% Similarity=0.201 Sum_probs=52.8
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCCC-C----cEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEPG-P----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~~-~----~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~ 132 (466)
+|..+.+.... .+ +.|+|.-+...+ . -.|+|.......+....-.. . .......++|++|+|+|+
T Consensus 10 ~P~~~~~~~~~--~t-v~l~W~~P~~~~G~pI~~Y~v~~~~~~~~~~~~~~~~~---~----~~~~~~~~~i~~L~p~t~ 79 (122)
T 2e3v_A 10 SPSIDQVEPYS--ST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDA---K----EASMEGIVTIVGLKPETT 79 (122)
T ss_dssp CCEEEEEEECS--SC-EEEEEECCCCC--CCEEEEEEEEEETTCCSCEEEEEEH---H----HHHTTTEEEECSCCTTCE
T ss_pred CCCccEEEecC--Cc-EEEEECCCCcCCCCcceEEEEEEEECCCCCcccceeee---e----ecCccceEEeCCCCCCCE
Confidence 48777776553 34 999999875332 2 24666665543231110000 0 011123578999999999
Q ss_pred EEEEecc------CCccceEEEECCCCC
Q 012311 133 YYYKIGS------GDSSREFWFQTPPKI 154 (466)
Q Consensus 133 Y~Yrv~~------~~~s~~~~F~T~p~~ 154 (466)
|.+||.. +..|....|+|.|..
T Consensus 80 Y~~rV~A~n~~G~g~~S~~~~~~t~~~~ 107 (122)
T 2e3v_A 80 YAVRLAALNGKGLGEISAASEFKTQPVR 107 (122)
T ss_dssp EEEEEEEEETTEECCCCCCEEEECCCCC
T ss_pred EEEEEEEEeCCccCCCcccccccccCCC
Confidence 9999964 346777888887753
|
| >2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0034 Score=50.64 Aligned_cols=87 Identities=17% Similarity=0.216 Sum_probs=53.1
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCCCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEEE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Yr 136 (466)
.+|..+++.... .+++.|+|.-+.....-.|+|.......+.... ... .... .++|+||+|+|.|.++
T Consensus 10 ~~P~~l~~~~~~--~~sv~lsW~~p~~~~~Y~v~y~~~~~~~~~~~~--~~~------~~~~--~~~l~~L~p~t~Y~~~ 77 (104)
T 2dkm_A 10 PPPRALTLAAVT--PRTVHLTWQPSAGATHYLVRCSPASPKGEEEER--EVQ------VGRP--EVLLDGLEPGRDYEVS 77 (104)
T ss_dssp CCCCCCEEEEEC--SSEEEEECCCCSSCSEEEEEEEESSSCCSSCCE--EEE------ESSS--EEEEESCCTTCCEEEE
T ss_pred CCCceeEEEecC--CCEEEEEEeCCCCCCeEEEEEEECCCCCCcceE--EEe------cCCC--EEEECCCCCCCEEEEE
Confidence 468888877553 579999997765433346777765432111000 000 0111 6899999999999999
Q ss_pred eccC---Cc--cceEEEECCCCCC
Q 012311 137 IGSG---DS--SREFWFQTPPKID 155 (466)
Q Consensus 137 v~~~---~~--s~~~~F~T~p~~g 155 (466)
|..- .. .....++|.|.+.
T Consensus 78 V~A~~~~~~s~p~~~~~~T~p~~~ 101 (104)
T 2dkm_A 78 VQSLRGPEGSEARGIRARTPTSGP 101 (104)
T ss_dssp EEEECSSSBCCCEEEECCCCCCSC
T ss_pred EEEECCCCCCCCEEEEEEcCCCCC
Confidence 9752 22 2345677876543
|
| >1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0037 Score=50.49 Aligned_cols=71 Identities=17% Similarity=0.102 Sum_probs=45.9
Q ss_pred CCcEEEEEEcCCCCC-----CcEEEEeecCCC-CceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEEEeccC----
Q 012311 71 GKAVIISWVTPHEPG-----PSTVSYGTSADK-FDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGSG---- 140 (466)
Q Consensus 71 ~~~~~V~W~t~~~~~-----~~~V~yg~~~~~-~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Yrv~~~---- 140 (466)
.+++.|+|..+...+ .-.|+|....+. .+..+. . . ....++|++|+|+|.|.+||..-
T Consensus 21 ~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~------~----~--~~~~~~v~~L~p~t~Y~frV~A~n~~G 88 (109)
T 1x5x_A 21 ITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKY------D----G--EDLAYTVKNLRRSTKYKFKVIAYNSEG 88 (109)
T ss_dssp SSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCEEEE------E----E--SCSEEEEESCCSSCEEEEEEEEECSSC
T ss_pred CCEEEEEEcCCCCCCCCcccEEEEEEecCCCCcceEEeE------e----C--CccEEEECCCCCCCEEEEEEEEEeCCC
Confidence 579999998765332 235777665432 222111 0 0 01246899999999999999652
Q ss_pred --CccceEEEECCCC
Q 012311 141 --DSSREFWFQTPPK 153 (466)
Q Consensus 141 --~~s~~~~F~T~p~ 153 (466)
..|+...++|.+.
T Consensus 89 ~s~~S~~~~~~T~~~ 103 (109)
T 1x5x_A 89 KSNPSEVVEFTTCPD 103 (109)
T ss_dssp EEEECCCEEEECCCC
T ss_pred CcCCccCEEeEeCCC
Confidence 3567788999875
|
| >2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.009 Score=49.17 Aligned_cols=81 Identities=19% Similarity=0.370 Sum_probs=53.8
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCC--CC----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCC
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHE--PG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~--~~----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T 131 (466)
+|..+.+.... .+++.|+|..+.. .+ .-.|+|....+...... . ......++|++|+|+|
T Consensus 31 ~P~~l~~~~~~--~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~------~------~~~~~~~~i~~L~p~t 96 (124)
T 2ed9_A 31 PPQNVSLEVVN--SRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGEMET------L------EPNNLWYLFTGLEKGS 96 (124)
T ss_dssp CCBSCCEEEEE--TTEEEEECBCCCTTTCCSCCCEEEEEEEESSSSCCEEE------E------CSSCSEEEEECCCSSC
T ss_pred CCeeeEEEEcC--CCEEEEEEECcCCcCCCcEEeEEEEEEEECCCCcceEE------e------cCCcCEEEEcCCCCCC
Confidence 57777776543 4799999988753 22 23677776654332211 0 1122356899999999
Q ss_pred EEEEEecc------CCccceEEEECCC
Q 012311 132 KYYYKIGS------GDSSREFWFQTPP 152 (466)
Q Consensus 132 ~Y~Yrv~~------~~~s~~~~F~T~p 152 (466)
.|.+||.. +.+|+...|+|+.
T Consensus 97 ~Y~~~V~A~n~~G~g~~S~~~~~~T~e 123 (124)
T 2ed9_A 97 QYSFQVSAMTVNGTGPPSNWYTAETPE 123 (124)
T ss_dssp EEEECEEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEEEEEEcCCccCCCCCCEEEECCC
Confidence 99999964 3467888899874
|
| >3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0099 Score=59.03 Aligned_cols=49 Identities=18% Similarity=0.100 Sum_probs=28.6
Q ss_pred CCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccceec
Q 012311 307 EKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYNIS 359 (466)
Q Consensus 307 ~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~~ 359 (466)
.++.-+|+++|...-........+.. ...|..-+ -+||+++.||.|...
T Consensus 206 ~g~D~II~l~H~G~~~d~~~~~~e~~--~~~lA~~v--~giD~IigGHsH~~~ 254 (341)
T 3gve_A 206 EGADVIIALAHTGIEKQAQSSGAENA--VFDLATKT--KGIDAIISGHQHGLF 254 (341)
T ss_dssp TTCSEEEEEECCCCCSSCCCTTCSSC--HHHHHHHC--SCCCEEEECSSCCEE
T ss_pred cCCCEEEEEeccCccccccccccchh--HHHHHhcC--CCCcEEEECCCCccC
Confidence 45888999999876432110111111 11222222 489999999998754
|
| >1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0036 Score=50.86 Aligned_cols=83 Identities=14% Similarity=0.291 Sum_probs=53.5
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCC--CCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEP--GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYY 135 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~--~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Y 135 (466)
.|..+++... ..+++.|+|..+... ..-.|+|............ . .. ...++|+||+|+|.|.+
T Consensus 20 ~P~~l~~~~~--~~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~----~------~~--~~~~~i~~L~p~t~Y~~ 85 (115)
T 1x5z_A 20 QPLNFKAEPE--SETSILLSWTPPRSDTIANYELVYKDGEHGEEQRIT----I------EP--GTSYRLQGLKPNSLYYF 85 (115)
T ss_dssp CCEEEEEECS--SSSEEEEEEECCSCCCCCEEEECBEESSSCCCBCCE----E------CS--SSEEEEECCCTTCEEEE
T ss_pred CCccCEeeeC--CCCEEEEEEcCCCCCCccEEEEEEEeCCCCCceEEe----c------CC--CcEEEECCCCCCCeEEE
Confidence 6878877644 357999999987432 1235666654432221110 0 01 13578999999999999
Q ss_pred EeccC------CccceEEEECCCCC
Q 012311 136 KIGSG------DSSREFWFQTPPKI 154 (466)
Q Consensus 136 rv~~~------~~s~~~~F~T~p~~ 154 (466)
||..- .+|+...|+|.+.+
T Consensus 86 ~V~A~n~~G~g~~S~~~~~~T~~~~ 110 (115)
T 1x5z_A 86 RLAARSPQGLGASTAEISARTMQSS 110 (115)
T ss_dssp CEEEECSSCEEEECCCEEEECCCCC
T ss_pred EEEEECCCcccCCCcCEEEecCCCC
Confidence 99652 36778899998753
|
| >1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0077 Score=49.27 Aligned_cols=84 Identities=13% Similarity=0.215 Sum_probs=52.1
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCCCc----EEEEeecCC-CCceEEEeEEEEeeeeccccceEEEEEecCCCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPGPS----TVSYGTSAD-KFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~~~----~V~yg~~~~-~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T 131 (466)
.+|..+.+.... .+++.|+|..+...+.. .|+|..... ..+..+. . ... ..++|++|+|+|
T Consensus 19 ~~P~~~~~~~~~--~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~------~----~~~--~~~~v~~L~p~t 84 (118)
T 1x3d_A 19 DIPNPPRIANRT--KNSLTLQWKAPSDNGSKIQNFVLEWDEGKGNGEFCQCY------M----GSQ--KQFKITKLSPAM 84 (118)
T ss_dssp CCCCCCEEEEEE--TTEEEEECCCCCCCSSCEEEEEEEECTTTSSSCCEEEE------E----ESC--SEEEEESCCTTC
T ss_pred cCCCCcEEeccC--CCEEEEEECCCCCCCCcceEEEEEEecCCCCCCeEEee------c----cCC--cEEEeCCCCCCC
Confidence 356666665543 47999999887544333 344544332 1222111 0 011 346889999999
Q ss_pred EEEEEecc------CCccceEEEECCCCC
Q 012311 132 KYYYKIGS------GDSSREFWFQTPPKI 154 (466)
Q Consensus 132 ~Y~Yrv~~------~~~s~~~~F~T~p~~ 154 (466)
.|.|||.. +..|+...|+|.+.+
T Consensus 85 ~Y~frV~A~n~~G~s~~S~~~~~~T~~~~ 113 (118)
T 1x3d_A 85 GCKFRLSARNDYGTSGFSEEVLYYTSGCS 113 (118)
T ss_dssp EEEEECCEEESSCBCCCCCCEEEECSCCC
T ss_pred EEEEEEEEEECCCCCCCccCEEEEcCCCC
Confidence 99999964 246778889998653
|
| >1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0036 Score=51.39 Aligned_cols=88 Identities=16% Similarity=0.238 Sum_probs=55.8
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCC--CC----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCC
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHE--PG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~--~~----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T 131 (466)
+|..+++.... .+++.|+|..+.. .. .-.|+|....+...... ..... ...+-...++|++|+|+|
T Consensus 18 ~P~~~~~~~~~--~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~i~~L~p~t 89 (122)
T 1va9_A 18 PPMDVTLQPVT--SQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQY--SIVEM----KATGDSEVYTLDNLKKFA 89 (122)
T ss_dssp CCEEEEEEECS--SSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSC--BCCBC----CCCSSEEEEEEESCCSSC
T ss_pred CCcceEEEecc--CCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCcce--EEEEE----ecCCceeEEEeCCCCCCC
Confidence 58888876543 5799999998753 11 23677776553221100 00000 012234668999999999
Q ss_pred EEEEEecc------CCccceEEEECCCC
Q 012311 132 KYYYKIGS------GDSSREFWFQTPPK 153 (466)
Q Consensus 132 ~Y~Yrv~~------~~~s~~~~F~T~p~ 153 (466)
.|.+||.. +.+|+...|+|.+.
T Consensus 90 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 117 (122)
T 1va9_A 90 QYGVVVQAFNRAGTGPSSSEINATTLES 117 (122)
T ss_dssp CEEEEEEEEETTEECCCCCCEECCCCSS
T ss_pred EEEEEEEEEcCCCCCCCccCEEEEeCCC
Confidence 99999964 34677788998764
|
| >3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C | Back alignment and structure |
|---|
Probab=96.78 E-value=0.01 Score=47.65 Aligned_cols=81 Identities=12% Similarity=0.137 Sum_probs=51.2
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCC--C----CCcEEEEeecCCCC---ceEEEeEEEEeeeeccccceEEEEEecCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHE--P----GPSTVSYGTSADKF---DFTAEGTVNNYTFYKYKSGYIHQCLVDGL 127 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~--~----~~~~V~yg~~~~~~---~~~a~g~~~~y~~~~~~~~~~h~v~l~gL 127 (466)
.+|+.+.+.... .+++.|+|..+.. . ..-.|.|....+.. ... .... .. ...++|++|
T Consensus 6 ~~P~~~~~~~~s--~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~~~-----~~v~----~~--~~~~~l~~L 72 (102)
T 3n1f_C 6 TGPHIAYTEAVS--DTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKR-----DVVE----GS--KQWHMIGHL 72 (102)
T ss_dssp SCCEEEEEEECS--SSCEEEEEECCC-----CCCCEEEEEEEETTCCCGGGCEE-----EEEE----TT--CSEEEECSC
T ss_pred CCCceeEEEEcC--CCEEEEEeECCChhhcCCccceEEEEEEECCCCCCCceEE-----EEEc----CC--ceEEECCCC
Confidence 468888876543 5799999987742 1 12368888765421 111 1111 01 123689999
Q ss_pred CCCCEEEEEecc------CCccceEEEEC
Q 012311 128 EYDTKYYYKIGS------GDSSREFWFQT 150 (466)
Q Consensus 128 ~P~T~Y~Yrv~~------~~~s~~~~F~T 150 (466)
+|+|.|..+|.. +..|....++|
T Consensus 73 ~p~t~Y~v~V~A~n~~G~G~~S~~~~~~T 101 (102)
T 3n1f_C 73 QPETSYDIKMQCFNEGGESEFSNVMICET 101 (102)
T ss_dssp CTTCEEEEEEEEEETTEECCCCCCEEEEC
T ss_pred CCCCEEEEEEEEECCCcCCCCCCCEEeec
Confidence 999999999954 34566667776
|
| >1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0032 Score=52.52 Aligned_cols=86 Identities=14% Similarity=0.274 Sum_probs=54.6
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCCC----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~~----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y 133 (466)
.|..+++.... .+++.|+|..+.... .-.|+|........... ... .......++|++|+|+|.|
T Consensus 30 ~P~~l~~~~~~--~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~---~~~------~~~~~~~~~i~~L~p~t~Y 98 (130)
T 1wfo_A 30 PPMGILFPEVR--TTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTAT---VEV------LAPSARQYTATGLKPESVY 98 (130)
T ss_dssp CCCCCEEEEEC--SSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCCC---EEE------ECTTCCEEEEESCCSSSEE
T ss_pred CCCceEEEecC--CCEEEEEEcCCCCCCCceEEEEEEEEECCCCCceEE---EEE------eCCCceEEEEcCCCCCCEE
Confidence 57778777653 579999998775332 23577766543211000 000 1122345789999999999
Q ss_pred EEEeccC------CccceEEEECCCCC
Q 012311 134 YYKIGSG------DSSREFWFQTPPKI 154 (466)
Q Consensus 134 ~Yrv~~~------~~s~~~~F~T~p~~ 154 (466)
.+||..- .+|....|+|.+..
T Consensus 99 ~~~V~A~n~~G~g~~S~~~~~~T~~~~ 125 (130)
T 1wfo_A 99 LFRITAQTRKGWGEAAEALVVTTEKRS 125 (130)
T ss_dssp EEEEEEECSSCEEEEEEEEEECCSSCC
T ss_pred EEEEEEEeCCcCCCCcccEEEecCCCC
Confidence 9999652 35677789998653
|
| >1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0041 Score=51.09 Aligned_cols=89 Identities=17% Similarity=0.167 Sum_probs=56.4
Q ss_pred CCCCCCceEEEeeecCCCCcEEEEEEcCCCCC----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCC
Q 012311 54 KGHNSPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEY 129 (466)
Q Consensus 54 ~~~~~P~qv~lt~~~~~~~~~~V~W~t~~~~~----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P 129 (466)
.+..+|..+.+... .+++.++|.-+...+ .-.|+|.. .+..+..+.-. + ..-..+++|.+|+|
T Consensus 6 ep~~pP~~l~v~~~---~~sv~L~W~pP~~~~~~I~gY~vey~~-~~~~W~~~~~~---~------~~~~t~~~v~~L~p 72 (108)
T 1v5j_A 6 SGLSPPRGLVAVRT---PRGVLLHWDPPELVPKRLDGYVLEGRQ-GSQGWEVLDPA---V------AGTETELLVPGLIK 72 (108)
T ss_dssp CCCCCCEEEEEEEC---SSSEEEEEECCSCCSSCCCBEEEEEEE-TTCCCEEEEEE---E------CSSCCEEECCCCCT
T ss_pred CCCCCCcceEEEEe---CCEEEEEECCCCCCCCCCcEEEEEEEe-CCCCcEEeeee---c------CCCcCEEEeCCCCC
Confidence 33467888887642 468999999886422 23688887 33334433211 1 11233467999999
Q ss_pred CCEEEEEeccC------CccceEEEECCCCCC
Q 012311 130 DTKYYYKIGSG------DSSREFWFQTPPKID 155 (466)
Q Consensus 130 ~T~Y~Yrv~~~------~~s~~~~F~T~p~~g 155 (466)
+++|.+||..- ..|+...++|....+
T Consensus 73 g~~Y~FRV~A~n~~G~s~pS~~~~v~T~~~~~ 104 (108)
T 1v5j_A 73 DVLYEFRLVAFAGSFVSDPSNTANVSTSGLSG 104 (108)
T ss_dssp TSCEECCBEEEETTEEEEECSCCCCCCSSCSS
T ss_pred CCEEEEEEEEEcCCCCcCCCCCEEEEeCCccc
Confidence 99999999652 245666677765443
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=96.72 E-value=0.02 Score=51.64 Aligned_cols=84 Identities=19% Similarity=0.134 Sum_probs=53.0
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCC--------CCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEP--------GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLE 128 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~--------~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~ 128 (466)
.+|..+.+.... .+++.|+|.-+..+ ..-.|+|....+........ ......++|++|+
T Consensus 6 ~~P~~l~~~~~~--~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~-----------~~~~~~~~i~~L~ 72 (211)
T 3p4l_A 6 MPPVGVQASILS--HDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNA-----------NATTLSYLVTGLK 72 (211)
T ss_dssp CCCEEEEEEECS--SSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CCCEEE-----------EESSSEEEECSCC
T ss_pred CCCCCEEEEecC--CCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcceEEEe-----------CCCceEEEecCcC
Confidence 468888876553 57999999975311 12467777654321111110 1112347899999
Q ss_pred CCCEEEEEecc------CCccceEEEECCCC
Q 012311 129 YDTKYYYKIGS------GDSSREFWFQTPPK 153 (466)
Q Consensus 129 P~T~Y~Yrv~~------~~~s~~~~F~T~p~ 153 (466)
|+|.|.+||.. +.+|....|+|.+.
T Consensus 73 p~t~Y~~~V~A~n~~g~~~~S~~~~~~t~~~ 103 (211)
T 3p4l_A 73 PNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 103 (211)
T ss_dssp TTCEEEEEEEEEETTEECCCCCCEEEECCCC
T ss_pred CCCEEEEEEEEEcCCCCCccceeEeeecccC
Confidence 99999999964 24567788999754
|
| >2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0092 Score=48.09 Aligned_cols=85 Identities=20% Similarity=0.315 Sum_probs=51.2
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCC-CCcEEEEeecCCC-CceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADK-FDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYY 134 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~-~~~~V~yg~~~~~-~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~ 134 (466)
.+|.++.+.-. ..+++.|+|.-+... ..-.|+|...... ...... . ..-...++|+||+|||.|.
T Consensus 4 ~~P~~l~v~~~--t~~sv~lsW~~p~~~i~~Y~v~y~~~~~~~~~~~~~-----v------~~~~~~~~l~~L~p~t~Y~ 70 (104)
T 2rb8_A 4 DAPSQIEVKDV--TDTTALITWMPPSQPVDGFELTYGIKDVPGDRTTID-----L------TEDENQYSIGNLKPDTEYE 70 (104)
T ss_dssp CCCEEEEEESC--CSSCEEEEEECCSSCCSEEEEEEEETTCTTCCEEEE-----E------ETTCCEEEECSCCTTCEEE
T ss_pred CCCCccEEEEe--cCCeEEEEEcCCCCccceEEEEEEECcCCCceEEEE-----c------CCCcCEEEeCCCCCCCEEE
Confidence 35888877653 358999999876422 1246778765321 121110 0 1112346899999999999
Q ss_pred EEeccC-----CccceEEEECCCCC
Q 012311 135 YKIGSG-----DSSREFWFQTPPKI 154 (466)
Q Consensus 135 Yrv~~~-----~~s~~~~F~T~p~~ 154 (466)
++|..- .......|+|.+..
T Consensus 71 ~~V~A~~~~g~s~p~~~~~~T~~~~ 95 (104)
T 2rb8_A 71 VSLISRRGDMSSNPAKETFTTGLAA 95 (104)
T ss_dssp EEEEEEETTEECCCEEEEEECCC--
T ss_pred EEEEEEeCCccCCCEEEEEECCCCc
Confidence 999652 12334579998764
|
| >2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0044 Score=51.42 Aligned_cols=75 Identities=21% Similarity=0.371 Sum_probs=46.9
Q ss_pred CCCcEEEEEEcCCCCCC----cEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEEEeccC---Cc
Q 012311 70 DGKAVIISWVTPHEPGP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGSG---DS 142 (466)
Q Consensus 70 ~~~~~~V~W~t~~~~~~----~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Yrv~~~---~~ 142 (466)
..+++.|+|....+.++ -.|+|....+..+..... . ++....++|.||+|++.|.+||..- +.
T Consensus 20 ~~~sv~L~W~p~~dggsPI~~Y~I~yr~~~~~~w~~~~~-~---------~~~~~~~~l~~L~p~t~Y~frV~A~N~~G~ 89 (114)
T 2kbg_A 20 SGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEKK-V---------QGNKDHIILEHLQWTMGYEVQITAANRLGY 89 (114)
T ss_dssp STTCEEEEECCCCCSSSCCSEEEEEEEESSCCSCCEEEE-E---------ETTTCCEEECCCCTTCCEEEEEEEECTTSC
T ss_pred CCCEEEEEEECCCCCCCcccEEEEEEEeCCCCCcEEeEE-c---------CCCcCEEEEcCCCCCCEEEEEEEEEeCCcC
Confidence 36899999986543233 378888865433332211 0 1112247899999999999999752 22
Q ss_pred c--ceEEEECCCCC
Q 012311 143 S--REFWFQTPPKI 154 (466)
Q Consensus 143 s--~~~~F~T~p~~ 154 (466)
| ....|+|.+.+
T Consensus 90 s~pS~~~~~T~~~~ 103 (114)
T 2kbg_A 90 SEPTVYEFSMPPKP 103 (114)
T ss_dssp EEEEEEEECCCCCC
T ss_pred cCCcCCEEEcCCCC
Confidence 2 24689997654
|
| >1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.61 E-value=0.012 Score=48.47 Aligned_cols=72 Identities=17% Similarity=0.275 Sum_probs=44.6
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC----CcEEEEeecC-CCCceEEEeEEEEeeeeccccceEEEEEecCCCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSA-DKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~----~~~V~yg~~~-~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T 131 (466)
.+|..+.+.... .+++.|+|.-....+ .-.|+|.... +..+..+... .......++|++|+|+|
T Consensus 19 ~~P~~~~~~~~~--~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~---------~~~~~~~~~v~~L~p~t 87 (121)
T 1x4z_A 19 EAPDRPTISTAS--ETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSA---------IPPSRLSVEITGLEKGI 87 (121)
T ss_dssp CCCCCCEEEECC--SSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEEE---------ECTTCCEEEEESCCTTC
T ss_pred ccCCCCEEEEcc--CCEEEEEEECCCCCCCcceEEEEEEEECCCCCceEEeecc---------cCCCcCEEEECCCCCCC
Confidence 457777776543 579999998443222 2367777655 2333322111 01123457899999999
Q ss_pred EEEEEecc
Q 012311 132 KYYYKIGS 139 (466)
Q Consensus 132 ~Y~Yrv~~ 139 (466)
+|.|||..
T Consensus 88 ~Y~frV~A 95 (121)
T 1x4z_A 88 SYKFRVRA 95 (121)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999965
|
| >1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.59 E-value=0.003 Score=54.33 Aligned_cols=35 Identities=20% Similarity=0.189 Sum_probs=28.6
Q ss_pred EEEEecCCCCCCEEEEEecc------CCccceEEEECCCCC
Q 012311 120 HQCLVDGLEYDTKYYYKIGS------GDSSREFWFQTPPKI 154 (466)
Q Consensus 120 h~v~l~gL~P~T~Y~Yrv~~------~~~s~~~~F~T~p~~ 154 (466)
..++|+||+|+|.|..||.. +..|+...|+|++..
T Consensus 82 ts~~v~~L~P~T~Y~~rV~A~n~~G~G~~S~~~~f~T~~~~ 122 (137)
T 1wk0_A 82 TNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSCE 122 (137)
T ss_dssp SEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCSS
T ss_pred cEEEEcCCCCCCEEEEEEEEEeCCCcCCCCCCEEEECCCCC
Confidence 45799999999999999954 246788899999753
|
| >2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0034 Score=51.43 Aligned_cols=86 Identities=16% Similarity=0.236 Sum_probs=52.3
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCCCc----EEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPGPS----TVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~~~----~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~ 132 (466)
.+|..+.+... ..+++.|+|..+...+.. .|+|....+..... .... .......++|++|+|+|.
T Consensus 20 ~~P~~l~~~~~--~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~----~~~~-----~~~~~~~~~i~~L~p~t~ 88 (121)
T 2dlh_A 20 SAPRDVQARML--SSTTILVQWKEPEEPNGQIQGYRVYYTMDPTQHVNN----WMKH-----NVADSQITTIGNLVPQKT 88 (121)
T ss_dssp SCCEEEEECCC--SSSBCCEEEECCSCCCSCEEEEEEECCSCTTSCTTT----SCCC-----CCSSCSEECCBSCCSSCE
T ss_pred CCCcccEEEec--CCCEEEEEECCCCCCCCcEeEEEEEEEeCCCCCccc----cEEE-----ecCCceEEEecCCCCCCE
Confidence 35877776653 357999999987543333 34444332211000 0000 011223568999999999
Q ss_pred EEEEecc------CCccceEEEECCCC
Q 012311 133 YYYKIGS------GDSSREFWFQTPPK 153 (466)
Q Consensus 133 Y~Yrv~~------~~~s~~~~F~T~p~ 153 (466)
|.+||.. +.+|+...|+|.+.
T Consensus 89 Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 115 (121)
T 2dlh_A 89 YSVKVLAFTSIGDGPLSSDIQVITQTG 115 (121)
T ss_dssp EEEEEEEEESSCBCCCCCCEEEECCCC
T ss_pred EEEEEEEEeCCccCCCCCCEEEECCCC
Confidence 9999954 34677889999864
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=96.56 E-value=0.026 Score=50.72 Aligned_cols=87 Identities=14% Similarity=0.168 Sum_probs=54.5
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCC-----CCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEP-----GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~-----~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T 131 (466)
.+|..+.+.... . ++.|+|..+... ..-.|+|.......+....-. .........++|++|+|+|
T Consensus 10 ~~P~~~~~~~~~--~-s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~~~~-------~~~~~~~~~~~i~~L~p~t 79 (209)
T 2vkw_A 10 SSPSIDQVEPYS--S-TAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYD-------AKEASMEGIVTIVGLKPET 79 (209)
T ss_dssp CCCEEEEEEECS--S-CEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEEEEEE-------HHHHHHHSEEEECCCCTTC
T ss_pred cCCcccEeeecc--C-eEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceEeEee-------ccCCCccceEEeCCCCCCC
Confidence 458888876653 2 699999987422 123577776654333222110 0001122357899999999
Q ss_pred EEEEEecc------CCccceEEEECCCC
Q 012311 132 KYYYKIGS------GDSSREFWFQTPPK 153 (466)
Q Consensus 132 ~Y~Yrv~~------~~~s~~~~F~T~p~ 153 (466)
.|.|||.. +..|....|+|.+.
T Consensus 80 ~Y~~~V~A~n~~G~~~~s~~~~~~T~~~ 107 (209)
T 2vkw_A 80 TYAVRLAALNGKGLGEISAASEFKTQPV 107 (209)
T ss_dssp EEEEEEEEEETTEECCCCCCEEEECCCS
T ss_pred eEEEEEEEEcCCcccCCcccccccccCC
Confidence 99999964 24567778999764
|
| >1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0068 Score=50.57 Aligned_cols=84 Identities=20% Similarity=0.391 Sum_probs=52.5
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCC--CCCcE----EEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCC
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHE--PGPST----VSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~--~~~~~----V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T 131 (466)
.|..+.+... ..+++.|+|..+.. .+... |+|...... ...... ........++|++|+|+|
T Consensus 21 ~P~~l~~~~~--~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~------~~~~~~----~~~~~~~~~~i~~L~p~t 88 (132)
T 1x5h_A 21 APQNLSLEVR--NSKSIMIHWQPPAPATQNGQITGYKIRYRKASRK------SDVTET----LVSGTQLSQLIEGLDRGT 88 (132)
T ss_dssp CCEEEEEECC--SSSEEEEEEECCCTTTCCSCEEEEBCEEEETTEE------EEEECC----BCCTTCCEEEEECCCSSC
T ss_pred CCeeeEEEeC--CCCEEEEEEeCCCCcCCCceEeEEEEEEEECCCC------CccEEE----EeCCCccEEEeCCCCCCC
Confidence 5777877644 35799999998754 22333 444443211 000000 012234567899999999
Q ss_pred EEEEEeccC------CccceEEEECCCC
Q 012311 132 KYYYKIGSG------DSSREFWFQTPPK 153 (466)
Q Consensus 132 ~Y~Yrv~~~------~~s~~~~F~T~p~ 153 (466)
.|.+||..- .+|+...|+|.+.
T Consensus 89 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 116 (132)
T 1x5h_A 89 EYNFRVAALTINGTGPATDWLSAETFES 116 (132)
T ss_dssp EEEEECEEEETTEEEEECCCEEEECCSS
T ss_pred EEEEEEEEEcCCccCCCCcCEEeEcCcc
Confidence 999999652 3677889999874
|
| >1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0074 Score=50.49 Aligned_cols=34 Identities=24% Similarity=0.300 Sum_probs=27.6
Q ss_pred EEEecCCCCCCEEEEEeccC------CccceEEEECCCCC
Q 012311 121 QCLVDGLEYDTKYYYKIGSG------DSSREFWFQTPPKI 154 (466)
Q Consensus 121 ~v~l~gL~P~T~Y~Yrv~~~------~~s~~~~F~T~p~~ 154 (466)
.++|+||+|+|+|.+||..- .+|+...++|++.+
T Consensus 76 ~~~v~gL~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~p 115 (120)
T 1wfu_A 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRES 115 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCCC
T ss_pred EEEECCCCCCCEEEEEEEEECCCCCCCCCccEeeEcCCCC
Confidence 37899999999999999752 35778899998753
|
| >1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.54 E-value=0.024 Score=43.83 Aligned_cols=66 Identities=20% Similarity=0.448 Sum_probs=40.7
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCCCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEEE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Yr 136 (466)
.+|..++++... .+++.++|..+.. ......|....+. ... +.. .. -..++++|+|||+|+||
T Consensus 5 ~~P~~l~~~~~~--~~sv~L~W~~~~~-~~~i~~Y~v~~~~-~~~--~~~---------~~--~~~~~~~L~~~t~Y~~~ 67 (88)
T 1k85_A 5 TAPTNLASTAQT--TSSITLSWTASTD-NVGVTGYDVYNGT-ALA--TTV---------TG--TTATISGLAADTSYTFT 67 (88)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSC-CSSEEEEEEEESS-SEE--EEE---------SS--SEEEECCCCSSCEEEEE
T ss_pred CCCCccEEEecc--CCEEEEEECCCCC-CCCccEEEEEECC-EEE--eec---------CC--CEEEeCCCCCCCEEEEE
Confidence 468888776543 5799999987643 2234555443221 111 110 11 13578999999999999
Q ss_pred ecc
Q 012311 137 IGS 139 (466)
Q Consensus 137 v~~ 139 (466)
|..
T Consensus 68 V~A 70 (88)
T 1k85_A 68 VKA 70 (88)
T ss_dssp EEE
T ss_pred EEE
Confidence 975
|
| >2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0037 Score=51.49 Aligned_cols=84 Identities=18% Similarity=0.237 Sum_probs=50.9
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCC-C----CcEEEEeecCC-CCceEEEeEEEEeeeeccccceEEEEEecCCCCCC
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEP-G----PSTVSYGTSAD-KFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~-~----~~~V~yg~~~~-~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T 131 (466)
.|..+.+... ...+++.|+|..+... + .-.|+|....+ ..+..+.. +....++|++|+|+|
T Consensus 20 ~P~~~~~~~~-~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~~~~~~~~------------~~~~~~~v~~L~p~t 86 (120)
T 2crm_A 20 IPVKPSVKGK-IHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIYS------------GATREHLCDRLNPGC 86 (120)
T ss_dssp CCCCCEEEEE-EETTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEEEC------------SSCSEEEECSCCTTS
T ss_pred CCCCCEEeec-cCCCEEEEEECCCCcCCCCeeeEEEEEEccCCCCcCCEEEEe------------ccccEEEECCCCCCC
Confidence 4555555411 1257999999876433 1 23577766543 12322210 112246899999999
Q ss_pred EEEEEecc------CCccceEEEECCCCC
Q 012311 132 KYYYKIGS------GDSSREFWFQTPPKI 154 (466)
Q Consensus 132 ~Y~Yrv~~------~~~s~~~~F~T~p~~ 154 (466)
+|.|||.. +.+|+...++|.+.+
T Consensus 87 ~Y~frV~A~n~~G~s~~S~~~~~~T~~~~ 115 (120)
T 2crm_A 87 FYRLRVYCISDGGQSAVSESLLVQTPAVS 115 (120)
T ss_dssp CEEEEEEEEETTEECCCCCCCCCCCCCCS
T ss_pred EEEEEEEEEcCCccCCCcccEEEEcCCCC
Confidence 99999965 246777778887543
|
| >2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.48 E-value=0.022 Score=46.20 Aligned_cols=81 Identities=12% Similarity=0.146 Sum_probs=49.9
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~ 132 (466)
.+|..+++.-. ..+++.++|..+..+. .-.|+|..... ..... .....++|+||+|||.
T Consensus 9 s~v~~l~v~~~--t~~Sv~LsW~~p~~~~~~i~~Y~v~~~~~~~--~~~~~-------------~~~t~~~i~gL~PgT~ 71 (104)
T 2dle_A 9 IQVFDVTAVNI--SATSLTLIWKVSDNESSSNYTYKIHVAGETD--SSNLN-------------VSEPRAVIPGLRSSTF 71 (104)
T ss_dssp CBEEEEEEEEE--CSSCEEEEEEESCSTTCCSCEEEEEEECSSC--EEEEE-------------ESSSEEECCSCCSSCE
T ss_pred CCCceEEEEEe--ecCEEEEEEcCCCCCCCceEEEEEEEECCCC--eEEEc-------------CCCCEEEECCCCCCCE
Confidence 34666666543 3579999998764332 24566654321 00100 0123579999999999
Q ss_pred EEEEeccC-----CccceEEEECCCCC
Q 012311 133 YYYKIGSG-----DSSREFWFQTPPKI 154 (466)
Q Consensus 133 Y~Yrv~~~-----~~s~~~~F~T~p~~ 154 (466)
|.++|..- ..+....++|.|.+
T Consensus 72 Y~~~V~A~~~~~~~~p~~~~~~T~p~p 98 (104)
T 2dle_A 72 YNITVCPVLGDIEGTPGFLQVHTPPVP 98 (104)
T ss_dssp EEEEEEEESSSCCCBCEEEEEECCCCS
T ss_pred EEEEEEEEECCcccCCeeEEEEccCCC
Confidence 99998752 23446678888754
|
| >2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.44 E-value=0.0088 Score=49.84 Aligned_cols=86 Identities=22% Similarity=0.189 Sum_probs=53.0
Q ss_pred CCceEEEeeecCCCCcEEEEEEcC--CCCCC----cEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCC
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTP--HEPGP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~--~~~~~----~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T 131 (466)
.|..+++.... .+++.|+|..+ ...+. -.|+|........... ... ........++|+||+|+|
T Consensus 21 ~P~~l~~~~~~--~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~-----~~~---~~~~~~~~~~i~~L~p~t 90 (134)
T 2edx_A 21 PPQKVMCVSMG--STTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRGRH-----VVD---GISREHSSWDLVGLEKWT 90 (134)
T ss_dssp CSEEEEEECSS--SSEEEEEEECCCSTTCSSCEEEEEEEEEESSSSCCCCE-----EEC---CCBTTCSEEEEESCCTTC
T ss_pred CCcccEEEeCC--CCEEEEEecCCCccCCCCceeEEEEEEEECCCCCcccE-----EEE---eeCCCccEEEeCCCCCCC
Confidence 57788776543 57999999987 32222 2455655443211100 000 001223457899999999
Q ss_pred EEEEEecc------CCccceEEEECCCC
Q 012311 132 KYYYKIGS------GDSSREFWFQTPPK 153 (466)
Q Consensus 132 ~Y~Yrv~~------~~~s~~~~F~T~p~ 153 (466)
.|.+||.. +.+|....|+|.+.
T Consensus 91 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 118 (134)
T 2edx_A 91 EYRVWVRAHTDVGPGPESSPVLVRTDED 118 (134)
T ss_dssp EEEEEEEEEETTBCCCCCCCEEEECCCC
T ss_pred EEEEEEEEEcCCCcCCCCCCEEeecCCC
Confidence 99999954 24677788999864
|
| >1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.41 E-value=0.022 Score=46.13 Aligned_cols=83 Identities=13% Similarity=0.098 Sum_probs=53.2
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCC---CC----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHE---PG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEY 129 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~---~~----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P 129 (466)
.+|..+++.......+++.|+|..+.. +. .-.|+|....+..+..+... . ...+.|.+|+|
T Consensus 9 ~pP~~l~v~~~~~~~~~l~lsW~~P~~w~~~~~~~l~Y~v~y~~~~~~~w~~~~~~----------~--~~~~~l~~L~p 76 (109)
T 1uc6_A 9 DPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVELS----------N--GTAHTITDAYA 76 (109)
T ss_dssp CCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCCEEES----------S--CSEEEETTCCS
T ss_pred CCCcceEEEEcCCCCCEEEEEECCCCCccCCCcEEEEEEEEEEECCCCCcEEEecc----------c--CCEEEEeCCCC
Confidence 468888887643335799999998753 21 34688887765433222110 0 12468899999
Q ss_pred CCEEEEEeccC--------CccceEEEECC
Q 012311 130 DTKYYYKIGSG--------DSSREFWFQTP 151 (466)
Q Consensus 130 ~T~Y~Yrv~~~--------~~s~~~~F~T~ 151 (466)
||.|..||... .||....++|.
T Consensus 77 ~t~Y~~~VRa~~~g~g~wS~WS~~~~~~~~ 106 (109)
T 1uc6_A 77 GKEYIIQVAAKDNEIGTWSDWSVAAHATPW 106 (109)
T ss_dssp SSCEEEEEECCBSSSCCCCCCCEEEEECCC
T ss_pred CCEEEEEEEEEeCCCCCcCcCCCCeeeeec
Confidence 99999999652 35555555543
|
| >1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.38 E-value=0.019 Score=47.62 Aligned_cols=88 Identities=13% Similarity=0.017 Sum_probs=52.4
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC----CcEEEEeec---CCCCceEEEeEEEEeeeeccccceEEEEEecCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTS---ADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEY 129 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~----~~~V~yg~~---~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P 129 (466)
.+|..+.+... ..+++.|+|.-+...+ .-.|+|... ....+..+.-. . .......++|++|+|
T Consensus 19 ~~P~~l~~~~~--~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~w~~~~~~--~------~~~~~~~~~v~~L~p 88 (124)
T 1wis_A 19 GPPTNLGISNI--GPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQL--S------NEPDARSMEVPDLNP 88 (124)
T ss_dssp CCCEEEEEESC--CSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEE--E------SCTTCSEEEECSCCT
T ss_pred ccCCCCEEEEe--cCCEEEEEEECCCCCCCcccEEEEEEEECCCCCCCCCeEeeeE--c------cCCCceEEEeCCCCC
Confidence 46888877643 3579999996554322 246777762 22233222110 0 011223578999999
Q ss_pred CCEEEEEeccC------Cccce-EEEECCCCC
Q 012311 130 DTKYYYKIGSG------DSSRE-FWFQTPPKI 154 (466)
Q Consensus 130 ~T~Y~Yrv~~~------~~s~~-~~F~T~p~~ 154 (466)
+|.|.+||..- ..|.. ..++|.+.+
T Consensus 89 ~t~Y~frV~A~N~~G~s~~S~~~~~~~T~~~~ 120 (124)
T 1wis_A 89 FTCYSFRMRQVNIVGTSPPSQPSRKIQTLQSG 120 (124)
T ss_dssp TSEECCCCEEECSSCBCCCCCCCCCEECCCSS
T ss_pred CCEEEEEEEEEECCccCCCcCCccceEcCCCC
Confidence 99999999652 23443 468887653
|
| >2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.38 E-value=0.015 Score=47.53 Aligned_cols=83 Identities=16% Similarity=0.233 Sum_probs=50.7
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCC-CCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYY 135 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~-~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Y 135 (466)
.+|..+++..- ..+++.|+|.-+... ..-.|+|....+.. ... .. ..-...++|+||+|+|.|.+
T Consensus 9 ~~P~~l~~~~~--t~~sv~lsW~~p~~~i~~Y~v~y~~~~~~~-~~~-----~v------~~~~t~~~l~~L~P~t~Y~~ 74 (115)
T 2cuh_A 9 DGPTQLRALNL--TEGFAVLHWKPPQNPVDTYDIQVTAPGAPP-LQA-----ET------PGSAVDYPLHDLVLHTNYTA 74 (115)
T ss_dssp SSCEEEECCCC--SSSCEEEEEECCSSCCSEEEEEEECSSSCC-EEE-----EE------ETTCSEEEECSCCSSSEEEE
T ss_pred CCCcceEEEec--cCCeEEEEEECCCCCccEEEEEEEcCCCCc-EEE-----EE------CCCccEEEEeCCCCCCEEEE
Confidence 35777766543 368999999876432 23457776543211 111 00 11123578999999999999
Q ss_pred EeccC-----CccceEEEECCCC
Q 012311 136 KIGSG-----DSSREFWFQTPPK 153 (466)
Q Consensus 136 rv~~~-----~~s~~~~F~T~p~ 153 (466)
+|..- .......|+|.+.
T Consensus 75 ~V~A~~~~~~s~~~~~~~~T~~~ 97 (115)
T 2cuh_A 75 TVRGLRGPNLTSPASITFTTGLE 97 (115)
T ss_dssp EEEEEETTEECCCEEEEEESCCC
T ss_pred EEEEEeCCCcCCCEEEEEEeCCC
Confidence 99652 1233567999864
|
| >1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A | Back alignment and structure |
|---|
Probab=96.36 E-value=0.011 Score=53.57 Aligned_cols=89 Identities=18% Similarity=0.194 Sum_probs=54.9
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~ 132 (466)
.+|..+++...+...+++.|+|..+...+ .-.|+|....+..+..+.-. ........++|++|+|+|.
T Consensus 105 ~pP~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~p~t~ 176 (215)
T 1bqu_A 105 NPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE--------DTASTRSSFTVQDLKPFTE 176 (215)
T ss_dssp CCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGG--------GGCSCCSEEEECSCCSSEE
T ss_pred CCCCceEEEEecCCCceEEEEEeCCCCCCcceEEEEEEEccCCCCCceEeccc--------cccCccceEEeCCCCCCCE
Confidence 46888887654324579999999764322 23677776553333221100 0012233578999999999
Q ss_pred EEEEecc------C---CccceEEEECCCC
Q 012311 133 YYYKIGS------G---DSSREFWFQTPPK 153 (466)
Q Consensus 133 Y~Yrv~~------~---~~s~~~~F~T~p~ 153 (466)
|.+||.. + .+|+...|+|++.
T Consensus 177 Y~~~V~A~n~~g~g~~S~~S~~~~~~T~~~ 206 (215)
T 1bqu_A 177 YVFRIRCMKEDGKGYWSDWSEEASGITYED 206 (215)
T ss_dssp EEEEEEEEETTSCSCCCCCCCCEEEEECCC
T ss_pred EEEEEEEccCCCCCccCCCCCccccccccc
Confidence 9999954 2 2567778888764
|
| >3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.36 E-value=0.029 Score=44.69 Aligned_cols=70 Identities=21% Similarity=0.364 Sum_probs=45.4
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCC-CCcEEEEeecCCCC-ceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKF-DFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYY 134 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~-~~~~V~yg~~~~~~-~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~ 134 (466)
.+|..+.+... ..+++.|+|.-+..+ ..-.|+|....... .... . .....-.++|+||+|+|.|.
T Consensus 3 ~~P~~l~~~~~--~~~sv~lsW~pP~~~i~~Y~v~y~~~~~~~~~~~~-----~------~~~~~t~~~i~~L~p~t~Y~ 69 (100)
T 3b83_A 3 QPPFNIKVTNI--TLTTAVVTWQPPILPIEGILVTFGRKNDPSDETTV-----D------LTSSITSLTLTNLEPNTTYE 69 (100)
T ss_dssp CCCEEEEEESC--CSSCEEEEEECCSSCCSEEEEEEEESSCTTTCEEE-----E------ECTTEEEEEECSCCTTCEEE
T ss_pred ccCCccEEEEe--cCCEEEEEEcCCcccCCEEEEEEEECCCCCCceEE-----E------ECCcceEEEECCCCCCCEEE
Confidence 35888877654 357999999876432 23467887654321 1111 0 11233457899999999999
Q ss_pred EEecc
Q 012311 135 YKIGS 139 (466)
Q Consensus 135 Yrv~~ 139 (466)
+||..
T Consensus 70 ~~V~A 74 (100)
T 3b83_A 70 IRIVA 74 (100)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99975
|
| >1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.34 E-value=0.0055 Score=50.55 Aligned_cols=89 Identities=16% Similarity=0.195 Sum_probs=53.8
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCC--CC----CcEEEEeecCCCCc---eEEEeEEEEeeeeccccceEEEEEecCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHE--PG----PSTVSYGTSADKFD---FTAEGTVNNYTFYKYKSGYIHQCLVDGL 127 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~--~~----~~~V~yg~~~~~~~---~~a~g~~~~y~~~~~~~~~~h~v~l~gL 127 (466)
.+|..+++.... .+++.|+|.-+.. .. .-.|+|....+... .........+ ..-...++|+||
T Consensus 16 ~~P~~l~~~~~~--~~sv~l~W~~p~~~~~~g~i~gY~v~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~i~~L 87 (125)
T 1uen_A 16 VAPGNVRVNVVN--STLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTF------QGSKTHGMLPGL 87 (125)
T ss_dssp CCCSSCEEEEEE--TTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEEE------ESSCSEEEEESC
T ss_pred CCCceeEEEecC--CcEEEEEEcCCCchhcCceEeEEEEEEEECCCCcccccccccceEEEe------cCCccEEEeCCC
Confidence 458888776543 5799999987631 11 23566765543321 0000111111 112346789999
Q ss_pred CCCCEEEEEeccC------CccceEEEECCCC
Q 012311 128 EYDTKYYYKIGSG------DSSREFWFQTPPK 153 (466)
Q Consensus 128 ~P~T~Y~Yrv~~~------~~s~~~~F~T~p~ 153 (466)
+|+|.|.+||..- .+|+...|+|.+.
T Consensus 88 ~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 119 (125)
T 1uen_A 88 EPFSHYTLNVRVVNGKGEGPASPDRVFNTPEG 119 (125)
T ss_dssp CSSCEEEEEEEEEESSCEEEECCCEEEECCCC
T ss_pred CCCCEEEEEEEEecCCCCCCCCCCEEEECCCC
Confidence 9999999999642 3577788999864
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=96.33 E-value=0.038 Score=50.78 Aligned_cols=98 Identities=14% Similarity=0.191 Sum_probs=59.7
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCC-CCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYY 135 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~-~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Y 135 (466)
.+|+.+.+.... .+++.|+|.-+... ..-.|+|....+.......- ......++|++|+|+|.|.+
T Consensus 7 ~~P~~l~~~~~~--~~si~l~W~~p~g~i~~Y~v~~~~~~~~~~~~~~~-----------~~~~~~~~i~~L~p~t~Y~~ 73 (234)
T 3f7q_A 7 GAPQNPNAKAAG--SRKIHFNWLPPSGKPMGYRVKYWIQGDSESEAHLL-----------DSKVPSVELTNLYPYCDYEM 73 (234)
T ss_dssp CCCEEEEEEECS--SSCEEEEEECCSSCCCEEEEEEEETTSCGGGCEEE-----------EESSSEEEECSCCTTCEEEE
T ss_pred CCCcceEEEEcC--CCEEEEEEECCCCccceEEEEEEECCCCccceEEE-----------cCCccEEEECCCCCCCEEEE
Confidence 468888887553 57999999986422 23467787655432211100 01122478999999999999
Q ss_pred Eecc------CCccceEEEECCCCC-CCCCCeEEEEEcc
Q 012311 136 KIGS------GDSSREFWFQTPPKI-DPDASYKFGIIGD 167 (466)
Q Consensus 136 rv~~------~~~s~~~~F~T~p~~-g~~~~~~f~v~GD 167 (466)
||.. +..|....|+|.+.. +....+++..+++
T Consensus 74 ~V~A~n~~G~g~~s~~~~~~T~~~~P~~P~~l~~~~~~~ 112 (234)
T 3f7q_A 74 KVCAYGAQGEGPYSSLVSCRTHQEVPSEPGRLAFNVVSS 112 (234)
T ss_dssp EEEEEETTEECCCCCCEEEECCCCCCCCCCCCEEEECSS
T ss_pred EEEEEeCCCcCCCCCeEEEEcCCCCCCCCCccEEEEecC
Confidence 9954 245667789987532 2223455544433
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=96.31 E-value=0.0023 Score=59.27 Aligned_cols=63 Identities=21% Similarity=0.251 Sum_probs=40.4
Q ss_pred CeEEEEEccCCCCCCcHHHHHHHHH----h-CCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCc
Q 012311 159 SYKFGIIGDLGQTYNSLSTLEHYME----S-GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNH 233 (466)
Q Consensus 159 ~~~f~v~GD~g~~~~~~~tl~~~~~----~-~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNH 233 (466)
..+++++||+|... ..+.++.+ . ++|.++++||++..... . .+.++.+ ...+++.+.|||
T Consensus 12 ~~~i~visDiHg~~---~~l~~~l~~~~~~~~~d~~i~~GD~~~~g~~------~-----~~~~~~l-~~~~~~~v~GNh 76 (221)
T 1g5b_A 12 YRNIWVVGDLHGCY---TNLMNKLDTIGFDNKKDLLISVGDLVDRGAE------N-----VECLELI-TFPWFRAVRGNH 76 (221)
T ss_dssp CSCEEEECCCTTCH---HHHHHHHHHHTCCTTTCEEEECSCCSSSSSC------H-----HHHHGGG-GSTTEEECCCHH
T ss_pred CceEEEEEcCCCCH---HHHHHHHHHccCCCCCCEEEEeCCccCCCCC------h-----HHHHHHH-hcCCEEEEccCc
Confidence 46899999999543 33333332 2 58999999999953211 1 1222222 235899999999
Q ss_pred eee
Q 012311 234 EIE 236 (466)
Q Consensus 234 E~~ 236 (466)
|..
T Consensus 77 d~~ 79 (221)
T 1g5b_A 77 EQM 79 (221)
T ss_dssp HHH
T ss_pred HHH
Confidence 965
|
| >1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.28 E-value=0.013 Score=47.55 Aligned_cols=84 Identities=17% Similarity=0.108 Sum_probs=48.6
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCCC----cEEEEeecCC-CCceEEEeEEEEeeeeccccceEEEEEecCCCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPGP----STVSYGTSAD-KFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~~----~~V~yg~~~~-~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T 131 (466)
.+|.++.+.... .+++.|+|..+...+. -.|+|....+ ..+..+... .....++|++|+|+|
T Consensus 17 ~~P~~~~~~~~~--~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~-----------~~~~~~~i~~L~p~t 83 (117)
T 1uem_A 17 GPPSKPQVTDVT--KNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVANH-----------VKTTLYTVRGLRPNT 83 (117)
T ss_dssp BCCCCCEEEEEC--SSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEEEEE-----------ECSSEEEECSCCTTC
T ss_pred cCCCCCEEEEec--CCEEEEEEeCCCCCCcCceEEEEEEEECCCCCceeEcccc-----------cCcCEEEECCCCCCC
Confidence 357777776443 5799999987642222 3566665431 111111100 011246899999999
Q ss_pred EEEEEeccC------CccceEE-EECCCC
Q 012311 132 KYYYKIGSG------DSSREFW-FQTPPK 153 (466)
Q Consensus 132 ~Y~Yrv~~~------~~s~~~~-F~T~p~ 153 (466)
.|.|||..- .+|..-. ++|.+.
T Consensus 84 ~Y~frV~A~n~~G~s~~S~~~~~v~t~~~ 112 (117)
T 1uem_A 84 IYLFMVRAINPQGLSDPSPMSDPVRTQDS 112 (117)
T ss_dssp EEEEEEEEEETTEEEEECCCCCCEECCCS
T ss_pred EEEEEEEEECCCccCCCcCCCccEEccCC
Confidence 999999752 2333333 777654
|
| >2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.28 E-value=0.022 Score=46.52 Aligned_cols=83 Identities=17% Similarity=0.188 Sum_probs=52.5
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCC-CCcEEEEeecCCCCce--EEEeEEEEeeeeccccceEEEEEecCCCCCCEE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDF--TAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~-~~~~V~yg~~~~~~~~--~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y 133 (466)
.+|..++++-- ..+++.|+|.-.... ..-.|+|....+.... .+.|. ...++|+||+|+|.|
T Consensus 9 ~pP~~l~~~~v--t~tsi~vsW~pp~~~i~~Y~I~y~~~~~~~~~~~~v~~~-------------~t~~~l~~L~p~T~Y 73 (108)
T 2ee3_A 9 APPRHLGFSDV--SHDAARVFWEGAPRPVRLVRVTYVSSEGGHSGQTEAPGN-------------ATSAMLGPLSSSTTY 73 (108)
T ss_dssp CCSSCEEEESC--CSSCEEEEESCCSSCCSEEEEEEEETTTCCBCCEEEETT-------------CCEEEECSCCSSCEE
T ss_pred CCCceEEEEEc--cCCeEEEEeeCCCCCccEEEEEEEeCCCCceeEEEcCCC-------------cCEEEcCCCCCCCEE
Confidence 46888887644 468999999865322 2347888876543211 12111 134789999999999
Q ss_pred EEEeccC---Ccc--ceEEEECCCCC
Q 012311 134 YYKIGSG---DSS--REFWFQTPPKI 154 (466)
Q Consensus 134 ~Yrv~~~---~~s--~~~~F~T~p~~ 154 (466)
..+|..- +.+ -...|+|.+.+
T Consensus 74 ~v~V~A~~~~g~s~p~~~~~~T~~vP 99 (108)
T 2ee3_A 74 TVRVTCLYPGGGSSTLTGRVTTKKAP 99 (108)
T ss_dssp EEEEEEECTTSCEEEEEEEEECCCCC
T ss_pred EEEEEEEeCCCcCCCccCEEEeCCCC
Confidence 9999642 222 23479997433
|
| >2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=96.25 E-value=0.0034 Score=59.93 Aligned_cols=63 Identities=21% Similarity=0.230 Sum_probs=39.7
Q ss_pred CeEEEEEccCCCCCCcHHHHHHHHHh----CC-CEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCc
Q 012311 159 SYKFGIIGDLGQTYNSLSTLEHYMES----GA-QTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNH 233 (466)
Q Consensus 159 ~~~f~v~GD~g~~~~~~~tl~~~~~~----~~-dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNH 233 (466)
..+++++||+|.. ...+.++.+. .+ |.++++||++.. +. .. .+..+.+. ..+++.+.|||
T Consensus 18 ~~~i~visDiHg~---~~~l~~~l~~~~~~~~~d~ii~~GD~vd~-g~-----~~--~~~l~~l~----~~~~~~v~GNH 82 (262)
T 2qjc_A 18 TGRVIIVGDIHGC---RAQLEDLLRAVSFKQGSDTLVAVGDLVNK-GP-----DS--FGVVRLLK----RLGAYSVLGNH 82 (262)
T ss_dssp CSCEEEECCCTTC---HHHHHHHHHHHTCCTTTSEEEECSCCSSS-SS-----CH--HHHHHHHH----HHTCEECCCHH
T ss_pred CCeEEEEeCCCCC---HHHHHHHHHHHhccCCCCEEEEecCCCCC-CC-----CH--HHHHHHHH----HCCCEEEeCcC
Confidence 3489999999943 3344444332 34 999999999953 21 11 11222222 24899999999
Q ss_pred eee
Q 012311 234 EIE 236 (466)
Q Consensus 234 E~~ 236 (466)
|..
T Consensus 83 d~~ 85 (262)
T 2qjc_A 83 DAK 85 (262)
T ss_dssp HHH
T ss_pred hHH
Confidence 975
|
| >1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A | Back alignment and structure |
|---|
Probab=96.24 E-value=0.016 Score=55.57 Aligned_cols=88 Identities=18% Similarity=0.195 Sum_probs=56.5
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~ 132 (466)
.+|..+.+...+...+++.|+|..+...+ .-.|+|....+..+..+.-. ........++|++|+|+|.
T Consensus 201 ~pP~~~~v~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~w~~~~~~--------~~~~~~~~~~l~~L~p~t~ 272 (303)
T 1i1r_A 201 NPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE--------DTASTRSSFTVQDLKPFTE 272 (303)
T ss_dssp CCCEEEEEECCSSSSSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGG--------GGCSCCSEEEECSCCTTCE
T ss_pred CCCcceEEEEecCCCCEEEEEECCCCCCCcccEEEEEEEEeCCCCCceEEccc--------cCCCceeEEEeCCCCCCCE
Confidence 46888887654334689999999875322 23677777654333222100 0011223578999999999
Q ss_pred EEEEecc------C---CccceEEEECCC
Q 012311 133 YYYKIGS------G---DSSREFWFQTPP 152 (466)
Q Consensus 133 Y~Yrv~~------~---~~s~~~~F~T~p 152 (466)
|.+||.. + .||+...|+|+.
T Consensus 273 Y~~rV~A~n~~G~G~~S~wS~~~~~~T~e 301 (303)
T 1i1r_A 273 YVFRIRCMKEDGKGYWSDWSEEASGITYE 301 (303)
T ss_dssp EEEEEEEEETTSCSCCCCCCCCEEEECCC
T ss_pred EEEEEEeccCCCCCCcCCCCCccceeCCc
Confidence 9999964 2 367788999975
|
| >2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.24 E-value=0.013 Score=48.31 Aligned_cols=85 Identities=14% Similarity=0.151 Sum_probs=52.4
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCC-CCcEEEEeecCCC---------CceEEEeEEEEeeeeccccceEEEEEecC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADK---------FDFTAEGTVNNYTFYKYKSGYIHQCLVDG 126 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~-~~~~V~yg~~~~~---------~~~~a~g~~~~y~~~~~~~~~~h~v~l~g 126 (466)
-.|.+++++-- ..++++|+|..+... ..-.|+|....+. ..... .. .+-...++|+|
T Consensus 10 p~p~~L~v~~~--T~~Si~LsW~~p~g~v~~Y~i~y~~~~~~~~e~~~~~~~~~~~-----~v------~~~~t~~~l~g 76 (112)
T 2cui_A 10 PRLSQLSVTDV--TTSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQREL-----MV------PGTRHSAVLRD 76 (112)
T ss_dssp CCCCCCEEESC--CSSCEEEECCCCTTSCSEEEEEEECCCCSSSCCCSSCCCCEEE-----EE------ETTCCEEEECS
T ss_pred CCCCceEEEee--cCCeEEEEECCCCCCccEEEEEEEeCCCCccccccccCcceEE-----Ec------CCCcCEEEeCC
Confidence 35777777654 468999999876432 2457888765432 01111 00 11122589999
Q ss_pred CCCCCEEEEEeccC---Cc--cceEEEECCCCC
Q 012311 127 LEYDTKYYYKIGSG---DS--SREFWFQTPPKI 154 (466)
Q Consensus 127 L~P~T~Y~Yrv~~~---~~--s~~~~F~T~p~~ 154 (466)
|+|+|.|..+|..- .. .-....+|.+.+
T Consensus 77 L~PgT~Y~~~V~A~~~~~~s~p~~~~~~T~~~~ 109 (112)
T 2cui_A 77 LRSGTLYSLTLYGLRGPHKADSIQGTARTLSGP 109 (112)
T ss_dssp CCTTCEEEEEEEEECSSSEEEEEEEEEECCCCS
T ss_pred CCCCCEEEEEEEEEECCcccCCEEEEEEECCCC
Confidence 99999999998652 22 234577887654
|
| >2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.23 E-value=0.018 Score=47.63 Aligned_cols=88 Identities=13% Similarity=0.119 Sum_probs=52.6
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcC--CCCCCc----EEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTP--HEPGPS----TVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYD 130 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~--~~~~~~----~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~ 130 (466)
.+|..+++... ...+++.|+|.-+ ...... .|+|........... .... ......++|++|+|+
T Consensus 20 ~~P~~~~~~~~-~s~~sv~l~W~pp~~~~~~g~i~~Y~v~~~~~~~~~~~~~---~~~~------~~~~~~~~l~~L~p~ 89 (124)
T 2dbj_A 20 VAPLNVTVFLN-ESSDNVDIRWMKPPTKQQDGELVGYRISHVWQSAGISKEL---LEEV------GQNGSRARISVQVHN 89 (124)
T ss_dssp SCCEEEEEEEC-SSSSEEEEEEECCSCCSTTCCEEEEEEEEEEEETTEEEEE---EEEE------ESTTSCEEEECCCSS
T ss_pred CCCcceEEEec-CCCCEEEEEEcCCCcccCCCeEeEEEEEEEECCCCCccce---EEEe------CCCcceEEecCCCCC
Confidence 36888877632 2357999999987 322222 455542221110000 0000 111235789999999
Q ss_pred CEEEEEecc------CCccceEEEECCCCC
Q 012311 131 TKYYYKIGS------GDSSREFWFQTPPKI 154 (466)
Q Consensus 131 T~Y~Yrv~~------~~~s~~~~F~T~p~~ 154 (466)
|.|.+||.. +.+|+...|+|++..
T Consensus 90 t~Y~~~V~A~n~~G~Gp~S~~~~~~T~~~~ 119 (124)
T 2dbj_A 90 ATCTVRIAAVTRGGVGPFSDPVKIFIPAHS 119 (124)
T ss_dssp SEEEECEEEEESSCBCCCCCCEEEECCCSC
T ss_pred CEEEEEEEEECCCccCCCCCCEEEEcCCCC
Confidence 999999954 357888999998753
|
| >1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.22 E-value=0.022 Score=47.16 Aligned_cols=85 Identities=14% Similarity=0.191 Sum_probs=49.4
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCCCc----EEEEeecCC--CCceEEEeEEEEeeeeccccceEEEEEecCCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPGPS----TVSYGTSAD--KFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYD 130 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~~~----~V~yg~~~~--~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~ 130 (466)
.+|..+.+... ..+++.|+|.-+...+.. .|+|..... ..+..+. ... .. ..+ .|.+|+|+
T Consensus 18 ~~P~~~~~~~~--~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~w~~~~----~~~----~~-~~~--~i~~L~p~ 84 (127)
T 1uey_A 18 NPPFDLELTDQ--LDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQT----EVS----GT-QTT--AQLNLSPY 84 (127)
T ss_dssp CCCEEEEEECC--SSSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEEEEE----EEE----SS-CCE--EEECCCTT
T ss_pred cCCCCcEEEEc--cCCEEEEEEECCCCCCCCceEEEEEEEECCCCCCccEEEe----eeC----CC-ceE--EEecCCCC
Confidence 46888877654 357999999966433333 455654432 1121111 110 01 111 36699999
Q ss_pred CEEEEEecc------CCccce-EEEECCCCC
Q 012311 131 TKYYYKIGS------GDSSRE-FWFQTPPKI 154 (466)
Q Consensus 131 T~Y~Yrv~~------~~~s~~-~~F~T~p~~ 154 (466)
|.|.+||.. +..|.. ..|+|.+..
T Consensus 85 t~Y~frV~A~n~~G~s~~S~~~~~~~T~~~~ 115 (127)
T 1uey_A 85 VNYSFRVMAVNSIGKSLPSEASEQYLTKASE 115 (127)
T ss_dssp CEECCEEEEEESSCBCCCCSCCCCEECCCSS
T ss_pred CEEEEEEEEEeCCccCCccccccceEcCCCC
Confidence 999999965 234555 478887643
|
| >3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic} | Back alignment and structure |
|---|
Probab=96.22 E-value=0.022 Score=44.89 Aligned_cols=69 Identities=14% Similarity=0.266 Sum_probs=44.6
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCC-CCcEEEEeecCCCC-ceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKF-DFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYY 135 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~-~~~~V~yg~~~~~~-~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Y 135 (466)
+|.++.+.... .+++.|+|..+... ..-.|+|....+.. .... .. ......++|+||+|+|.|.+
T Consensus 4 ~P~~l~v~~~~--~~sv~l~W~~p~~~i~~Y~v~y~~~~~~~~~~~~-----~~------~~~~~~~~i~~L~p~t~Y~~ 70 (98)
T 3teu_A 4 APTDLQVTNVT--DTSITVSWTPPSATITGYRITYTPSNGPGEPKEL-----TV------PPSSTSVTITGLTPGVEYVV 70 (98)
T ss_dssp CCEEEEEEEEC--SSCEEEEEECCSSCCSEEEEEEEETTSCSCCEEE-----EE------CTTCSEEEECSCCTTCEEEE
T ss_pred CCCceEEEEec--CCEEEEEEeCCCCcccEEEEEEEECCCCCceEEE-----Ec------CCCcCEEEecCCCCCCEEEE
Confidence 58888876543 47999999987422 23468887544321 1111 11 11223578999999999999
Q ss_pred Eecc
Q 012311 136 KIGS 139 (466)
Q Consensus 136 rv~~ 139 (466)
||..
T Consensus 71 ~V~A 74 (98)
T 3teu_A 71 SVYA 74 (98)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9975
|
| >2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.21 E-value=0.017 Score=46.59 Aligned_cols=71 Identities=15% Similarity=0.264 Sum_probs=44.0
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC-C----cEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG-P----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~-~----~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T 131 (466)
.+|..+.++... .+++.|+|.-+...+ . -.|+|.......+..+.. .......++|++|+|+|
T Consensus 9 ~~P~~l~~~~~~--~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~~w~~~~~----------~~~~~~~~~v~~L~p~t 76 (110)
T 2yuw_A 9 SPPTLLTVDSVT--DTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIVANK----------DLIDKTKFTITGLPTDA 76 (110)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSSCCSSCEEEEEEEEEETTCSSEEECCS----------SCCCSSEEEECSCCTTC
T ss_pred CCCCccEEEecc--CCeEEEEECCCCCCCCCCccEEEEEEEECCCccceEecc----------ccCccCEEEECCCCCCC
Confidence 468777776443 579999999775332 2 246666554322222110 01122356889999999
Q ss_pred EEEEEecc
Q 012311 132 KYYYKIGS 139 (466)
Q Consensus 132 ~Y~Yrv~~ 139 (466)
+|.|||..
T Consensus 77 ~Y~frV~A 84 (110)
T 2yuw_A 77 KIFVRVKA 84 (110)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999975
|
| >2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.17 E-value=0.033 Score=44.76 Aligned_cols=83 Identities=16% Similarity=0.190 Sum_probs=51.5
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCC-CCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYY 135 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~-~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Y 135 (466)
.+|..+++..- ..+++.|+|.-+... ..-.|+|....+. ...+ . ...-...++|+||+|+|.|.+
T Consensus 9 ~~P~~l~v~~~--~~~sv~lsW~~p~~~i~~Y~i~y~~~~~~-~~~~-----~------~~~~~ts~~l~~L~p~t~Y~~ 74 (105)
T 2cum_A 9 EAPRDLEAKEV--TPRTALLTWTEPPVRPAGYLLSFHTPGGQ-TQEI-----L------LPGGITSHQLLGLFPSTSYNA 74 (105)
T ss_dssp CCCEEEEEESC--CSSCEEEEEECCSSCCSEEEEEEECTTSC-EEEE-----E------ECSSCSEEEECSCCTTCEEEE
T ss_pred CCCCceEEEec--cCCEEEEEEcCCCCccceEEEEEEeCCCc-eEEE-----E------ECCCccEEEECCCCCCCEEEE
Confidence 45887777644 357999999876432 2245777754431 1111 0 011223578999999999999
Q ss_pred EeccC-----CccceEEEECCCC
Q 012311 136 KIGSG-----DSSREFWFQTPPK 153 (466)
Q Consensus 136 rv~~~-----~~s~~~~F~T~p~ 153 (466)
+|..- .......|+|...
T Consensus 75 ~V~A~~~~g~s~~~~~~~~T~~~ 97 (105)
T 2cum_A 75 RLQAMWGQSLLPPVSTSFTTGGL 97 (105)
T ss_dssp EEEEEBTTBCCCCEEEEEECCCS
T ss_pred EEEEEeCCcccCCEEEEEEeCCc
Confidence 99652 1234568888754
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.17 E-value=0.053 Score=47.60 Aligned_cols=70 Identities=21% Similarity=0.314 Sum_probs=45.6
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC-----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG-----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~-----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T 131 (466)
.+|..+++.... .+++.|+|..+...+ .-.|+|....+..+....-.. ....++|++|+|+|
T Consensus 7 ~~P~~l~~~~~~--~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~-----------~~~~~~~~~L~p~t 73 (197)
T 3lpw_A 7 GPPQDLKVKEVT--KTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATNC-----------HKTSWKVDQLQEGC 73 (197)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCEEEEEEE-----------CSSEEEECCCCTTC
T ss_pred CCCCCcEEEEec--CCEEEEEEcCCccCCCCcccEEEEEEEECCCCccEEeecCC-----------CccEEEEcCCCCCC
Confidence 468888776443 579999999874221 236777776544333322110 11246899999999
Q ss_pred EEEEEecc
Q 012311 132 KYYYKIGS 139 (466)
Q Consensus 132 ~Y~Yrv~~ 139 (466)
.|.|||..
T Consensus 74 ~Y~~~V~a 81 (197)
T 3lpw_A 74 SYYFRVLA 81 (197)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999964
|
| >1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.14 E-value=0.016 Score=47.42 Aligned_cols=85 Identities=12% Similarity=0.237 Sum_probs=48.5
Q ss_pred CCCceE--EEeeecCCCCcEEEEEEcCCCCCCc----EEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCC
Q 012311 57 NSPQQV--HITQGDYDGKAVIISWVTPHEPGPS----TVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYD 130 (466)
Q Consensus 57 ~~P~qv--~lt~~~~~~~~~~V~W~t~~~~~~~----~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~ 130 (466)
.+|..+ .+.. ...+++.|+|.-+...+.. .|+|.... ..+..+.. . .......++|++|+|+
T Consensus 19 ~~P~~~~~~~~~--~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~-~~~~~~~~---~------~~~~~~~~~v~~L~p~ 86 (121)
T 1wf5_A 19 HAPEHPVATLST--VERRAINLTWTKPFDGNSPLIRYILEMSENN-APWTVLLA---S------VDPKATSVTVKGLVPA 86 (121)
T ss_dssp CCCSSCEEEECS--SSTTEEEEECCCCCCCSSCEEEEEEEEECTT-CCCEEEES---S------CCTTCCEEEEESCCTT
T ss_pred ccCCCcceeeEe--ccCCEEEEEEcCCCCCCCcceEEEEEEEcCC-CCceEeEc---c------cCCCccEEEECCcCCC
Confidence 457776 4443 3457999999876433333 45555443 22222110 0 1122335789999999
Q ss_pred CEEEEEeccC------CccceE-EEECCCC
Q 012311 131 TKYYYKIGSG------DSSREF-WFQTPPK 153 (466)
Q Consensus 131 T~Y~Yrv~~~------~~s~~~-~F~T~p~ 153 (466)
|+|.+||..- ..|..- .++|++.
T Consensus 87 t~Y~frV~A~n~~G~s~~S~~~~~~~t~~~ 116 (121)
T 1wf5_A 87 RSYQFRLCAVNDVGKGQFSKDTERVSLPES 116 (121)
T ss_dssp CEEEEEEEEEESSCEEEECCCCSCEECCCC
T ss_pred CEEEEEEEEEcCCccCCCcCCcceeEcCCC
Confidence 9999999652 234333 4677654
|
| >2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.13 E-value=0.035 Score=44.19 Aligned_cols=81 Identities=17% Similarity=0.318 Sum_probs=49.7
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCCC----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~~----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y 133 (466)
.|. +.|... ..+++.|+|..+...+ .-.|+|.......+.... . ......++|++|+|+|.|
T Consensus 10 ~p~-~~v~~~--~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-----~------~~~~~~~~i~~L~p~t~Y 75 (107)
T 2dn7_A 10 RPT-MMISTT--AMNTALLQWHPPKELPGELLGYRLQYCRADEARPNTID-----F------GKDDQHFTVTGLHKGTTY 75 (107)
T ss_dssp CCE-EEEEEC--STTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEEEE-----E------ETTCCEEEEECCCTTCEE
T ss_pred CCc-EeEEec--CCCEEEEEECCCCCCCCceeEEEEEEEECCCCCCEEEE-----e------CCCccEEEeCCCCCCCEE
Confidence 355 555544 3679999999875332 236777766543332210 0 112235789999999999
Q ss_pred EEEeccC------CccceEEEECCCC
Q 012311 134 YYKIGSG------DSSREFWFQTPPK 153 (466)
Q Consensus 134 ~Yrv~~~------~~s~~~~F~T~p~ 153 (466)
.+||..- ..|. ..|+|++.
T Consensus 76 ~~~V~A~n~~G~g~~s~-~~~~T~~~ 100 (107)
T 2dn7_A 76 IFRLAAKNRAGLGEEFE-KEIRTPED 100 (107)
T ss_dssp EEEEEEEETTEEEEEEE-EEEECCCC
T ss_pred EEEEEEEcCCcccCCee-eEEeCCCC
Confidence 9999652 2344 46888643
|
| >2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.11 E-value=0.03 Score=46.07 Aligned_cols=69 Identities=20% Similarity=0.287 Sum_probs=37.5
Q ss_pred CCCcEEEEEEcCCCCCCc----EEEEeec-CCCCceEEEeEEEEeeee--ccccceEEEEEecCCCCCCEEEEEecc
Q 012311 70 DGKAVIISWVTPHEPGPS----TVSYGTS-ADKFDFTAEGTVNNYTFY--KYKSGYIHQCLVDGLEYDTKYYYKIGS 139 (466)
Q Consensus 70 ~~~~~~V~W~t~~~~~~~----~V~yg~~-~~~~~~~a~g~~~~y~~~--~~~~~~~h~v~l~gL~P~T~Y~Yrv~~ 139 (466)
..++++|+|.-+...+.+ .|+|... .+..+..+.. ...+... ....+....++|+||+|+|.|.+||..
T Consensus 15 ~~~sv~L~W~~P~~~G~pI~~Y~Ve~r~~~~~~~w~~~~~-~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~FRV~A 90 (115)
T 2ic2_A 15 SDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTND-NIPYGKPKWNSELGKSFTASVTDLKPQHTYRFRILA 90 (115)
T ss_dssp C---EEEEEEEECCSSCCEEEEEEEEEECC---CCEEEEE-EEECCSCSCSSSSEEEEEEEECSCCSSEEEEEEEEE
T ss_pred eCCEEEEEEcCCCCCCCCCceEEEEEEECCCCCCceECcc-cccccccccccccCceeEEEeCCCCCCCEEEEEEEE
Confidence 357999999987655543 4666665 2233433321 1111000 001123346899999999999999965
|
| >4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.07 E-value=0.13 Score=53.87 Aligned_cols=172 Identities=13% Similarity=0.072 Sum_probs=85.0
Q ss_pred CeEEEEEccCCCCCC-----------------cHHH----HHHHHHhCCC-EEEEcccccccccccccccchhHHHHHHH
Q 012311 159 SYKFGIIGDLGQTYN-----------------SLST----LEHYMESGAQ-TVLFLGDLSYADRYQFIDVGVRWDSWGRF 216 (466)
Q Consensus 159 ~~~f~v~GD~g~~~~-----------------~~~t----l~~~~~~~~d-fvl~~GDl~Y~~~~~~~d~~~~wd~~~~~ 216 (466)
.++|+.+.|+|.... .... ++++.+.+++ ++|..||++...... . ..+ .+.
T Consensus 3 ~LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~n~llldaGD~~qGs~~~--~-~~~----g~~ 75 (530)
T 4h1s_A 3 ELTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWF--T-VYK----GAE 75 (530)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHHH--H-HHT----THH
T ss_pred EEEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCcCeEEEEeCCcccchHHH--H-HhC----ChH
Confidence 578899999885321 1222 3344444665 578899999542211 0 001 112
Q ss_pred HHHHhhcCCe-EEcCCCceeeccCcCCcccccccccccccCCCCCC------------CCCCCceEEEeeCCEE--EEEE
Q 012311 217 VERSAAYQPW-IWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLAS------------KSSSPLWYAIRRASAH--IIVL 281 (466)
Q Consensus 217 ~~~l~~~~P~-~~~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~~~~------------~~~~~~yYsf~~g~v~--fI~L 281 (466)
+-.++..+.+ ..++||||+++.... . ...+......|.-.+ ...-..|--++.++++ ||.+
T Consensus 76 ~i~~mN~lgyDa~~lGNHEFd~G~~~--l--~~~~~~~a~fp~L~aNv~~~~~~~~~~~~~~~py~I~~~~g~kIgviGl 151 (530)
T 4h1s_A 76 VAHFMNALRYDAMALGNHEFDNGVEG--L--IEPLLKEAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGY 151 (530)
T ss_dssp HHHHHHHTTCCEEECCGGGGTTTTHH--H--HTTTTTTCSSCEECTTEEECTTHHHHHTTTSBSEEEEEETTEEEEEEEE
T ss_pred HHHHHhccCCCEEEEchhhhccCHHH--H--HHHHHhhCCCCEEEEeeeccCCcccccCCcccceEEEEeccEEEeeccc
Confidence 2222333333 678999999764210 0 011111111121100 0111246678888754 5555
Q ss_pred cCCC------CC-C----CChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHH-cCCcE
Q 012311 282 SSYS------PF-V----KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVR-YKVDY 349 (466)
Q Consensus 282 ds~~------~~-~----~~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~-y~Vd~ 349 (466)
-+.. .. + ..-+..+...++|++ .++.-+|++.|..+-. .. .|.++ -+||+
T Consensus 152 tt~~~~~~~~~~~~~~f~d~v~~~~~~v~~Lr~---~g~D~II~LsH~G~~~--------d~-------~la~~v~giD~ 213 (530)
T 4h1s_A 152 TSKETPFLSNPGTNLVFEDEITALQPEVDKLKT---LNVNKIIALGHSGFEM--------DK-------LIAQKVRGVDV 213 (530)
T ss_dssp ECTTHHHHSCCCTTEEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHHH--------HH-------HHHHHSTTCCE
T ss_pred cccceeeeccCCCCcccCcHHHHHHHHHhhhhh---cCCCEEEEeccCCchH--------HH-------HHHhcCCCCCe
Confidence 5421 10 1 112233334444554 4677899999964310 01 12223 28999
Q ss_pred EEecccceec
Q 012311 350 RISNLHYNIS 359 (466)
Q Consensus 350 ~~~gh~~~~~ 359 (466)
++.||.|.+.
T Consensus 214 IlgGHsH~~~ 223 (530)
T 4h1s_A 214 VVGGHSNTFL 223 (530)
T ss_dssp EECCSSCCCB
T ss_pred eccCCcccee
Confidence 9999998643
|
| >3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=96.04 E-value=0.18 Score=49.80 Aligned_cols=48 Identities=10% Similarity=-0.007 Sum_probs=27.4
Q ss_pred CCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccceec
Q 012311 307 EKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYNIS 359 (466)
Q Consensus 307 ~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~~ 359 (466)
.++.-+|++.|..+-........+.. ...+. .--+||+++.||.|...
T Consensus 200 ~g~D~II~l~H~G~~~d~~~~~~en~--~~~~~---~v~gID~IlgGHsH~~~ 247 (339)
T 3jyf_A 200 KGADVVVVVAHSGLSADPYQAMAENS--VYYLS---QVPGVDAIMFGHAHAVF 247 (339)
T ss_dssp TTCSEEEEEECCCCCCSCCCTTCSCC--HHHHT---TSTTCCEEEECSSCSEE
T ss_pred cCCCEEEEEeccCccccccccccchh--HHHHh---hCCCCCEEEeCCCcccc
Confidence 46888999999876221110001111 11111 12489999999998754
|
| >2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.00 E-value=0.014 Score=47.61 Aligned_cols=71 Identities=13% Similarity=0.208 Sum_probs=43.5
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC---CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG---PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~---~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y 133 (466)
.+|..+.+... ..+++.|+|.-+...+ .-.|+|....+..+.... . .......++|++|+|+|.|
T Consensus 19 ~~P~~l~~~~~--~~~sv~l~W~~p~~~g~i~~Y~v~~~~~~~~~~~~~~----~------~~~~~~~~~i~~L~p~t~Y 86 (118)
T 2yrz_A 19 DTPTRLVFSAL--GPTSLRVSWQEPRCERPLQGYSVEYQLLNGGELHRLN----I------PNPAQTSVVVEDLLPNHSY 86 (118)
T ss_dssp CCCCCCEECCC--BTTEEEEECCCCCCSSCEEEEEEEEEBSSSCCEEEEE----E------SCTTCCEEEEESCCTTCEE
T ss_pred CCCCceEEEeC--CCCEEEEEeCCCCCCCCccEEEEEEEECCCCceEEEE----c------CCCCcCEEEeCCCCCCCEE
Confidence 35777766544 3579999998775432 234666654432221111 0 0112235789999999999
Q ss_pred EEEecc
Q 012311 134 YYKIGS 139 (466)
Q Consensus 134 ~Yrv~~ 139 (466)
.+||..
T Consensus 87 ~~~V~A 92 (118)
T 2yrz_A 87 VFRVRA 92 (118)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999965
|
| >2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.98 E-value=0.019 Score=47.18 Aligned_cols=71 Identities=23% Similarity=0.330 Sum_probs=46.5
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC-----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG-----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~-----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T 131 (466)
.+|..+.+.... .+++.|+|..+...+ .-.|+|.......+..+... .....++|++|+|+|
T Consensus 19 ~~P~~l~~~~~~--~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~w~~~~~~-----------~~~~~~~v~~L~p~t 85 (120)
T 2yux_A 19 GPPQIVKIEDVW--GENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVIEH-----------YHRTSATITELVIGN 85 (120)
T ss_dssp CCCSCEEEEEEE--TTEEEEEECCCSCCCSSCCCCCCEEEEETTTCCCEEEESS-----------CCSSCCEECCCCSSE
T ss_pred CcCCCCEEEEec--CCEEEEEEcCCCcCCCCCceEEEEEEEECCCCceEEeeec-----------CCcCEEEECCCCCCC
Confidence 468888776443 479999998764322 24688877654444333210 112235889999999
Q ss_pred EEEEEeccC
Q 012311 132 KYYYKIGSG 140 (466)
Q Consensus 132 ~Y~Yrv~~~ 140 (466)
.|.+||..-
T Consensus 86 ~Y~frV~A~ 94 (120)
T 2yux_A 86 EYYFRVFSE 94 (120)
T ss_dssp EEEEEECCC
T ss_pred EEEEEEEEe
Confidence 999999764
|
| >3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A | Back alignment and structure |
|---|
Probab=95.97 E-value=0.019 Score=45.90 Aligned_cols=70 Identities=14% Similarity=0.245 Sum_probs=45.0
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCC---CCCcEEEEeecCCC-CceEEEeEEEEeeeeccccceEEEEEecCCCCCCE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHE---PGPSTVSYGTSADK-FDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~---~~~~~V~yg~~~~~-~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~ 132 (466)
.+|..+++.--. .+++.|+|..+.. ...-.|+|....+. ..... .. ..-...++|+||+|+|.
T Consensus 6 ~~P~~l~v~~~t--~~Sv~l~W~~p~~~~~i~~Y~v~y~~~~~~~~~~~~-----~v------~~~~t~~~l~~L~p~t~ 72 (101)
T 3k2m_C 6 SVPTKLEVVAAT--PTSLLISWDAPMSSSSVYYYRITYGETGGNSPVQEF-----TV------PYSSSTATISGLSPGVD 72 (101)
T ss_dssp BSSCEEEEEEEE--TTEEEEEECCCCTTSCCCEEEEEEEETTCSSCCEEE-----EE------ETTCCEEEECSCCTTCE
T ss_pred CCCcceEEeecC--CCEEEEEecCCCCCCceeeEEEEEEECCCCCccEEE-----Ec------CCCccEEEECCCCCCCE
Confidence 358888886543 5799999987641 11236888875432 11111 00 11123579999999999
Q ss_pred EEEEecc
Q 012311 133 YYYKIGS 139 (466)
Q Consensus 133 Y~Yrv~~ 139 (466)
|..+|..
T Consensus 73 Y~~~V~A 79 (101)
T 3k2m_C 73 YTITVYA 79 (101)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999965
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=95.95 E-value=0.037 Score=49.80 Aligned_cols=83 Identities=20% Similarity=0.195 Sum_probs=51.1
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCC-C----CCcEEEEeecCC-CCceEEEeEEEEeeeeccccceEEEEEecCCCCCC
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHE-P----GPSTVSYGTSAD-KFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~-~----~~~~V~yg~~~~-~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T 131 (466)
+|..+.+... ..+++.|+|..+.. . ..-.|+|..... ..+....- ........+|+||+|+|
T Consensus 118 ~P~~~~~~~~--~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~----------~~~~~~~~~i~~L~p~t 185 (214)
T 2ibg_A 118 VPELLEIEEY--SETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKATI----------EGAHARSFKIAPLETAT 185 (214)
T ss_dssp CCEECCCBCC--SSSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCCEEEEE----------ECTTCCEEEECSCCTTC
T ss_pred CCcccEEEEc--cCCeEEEEEeCCCccCCCCcceEEEEEEECCCCcceEEeec----------cCCcceEEEeCCCCCCC
Confidence 4666554433 35789999998741 1 123677776554 22221110 01111246899999999
Q ss_pred EEEEEecc------CCccceEEEECCC
Q 012311 132 KYYYKIGS------GDSSREFWFQTPP 152 (466)
Q Consensus 132 ~Y~Yrv~~------~~~s~~~~F~T~p 152 (466)
.|.|||.. +..|....++|..
T Consensus 186 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 212 (214)
T 2ibg_A 186 MYEFKLQSFSAASASEFSALKQGRTQR 212 (214)
T ss_dssp EEEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEEEEEEcCCccCCCcceEeeEecC
Confidence 99999964 2467788898874
|
| >3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A | Back alignment and structure |
|---|
Probab=95.94 E-value=0.053 Score=48.86 Aligned_cols=84 Identities=13% Similarity=0.126 Sum_probs=55.6
Q ss_pred CCCceEEEeeec--CCCCcEEEEEEcCCCCC--------CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecC
Q 012311 57 NSPQQVHITQGD--YDGKAVIISWVTPHEPG--------PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDG 126 (466)
Q Consensus 57 ~~P~qv~lt~~~--~~~~~~~V~W~t~~~~~--------~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~g 126 (466)
.+|..+.+.... ...+++.|+|..+.... .-.|+|....+..+.... ......+.|.+
T Consensus 104 ~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~~~~~~~~------------~~~~~~~~l~~ 171 (210)
T 3n06_B 104 DPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIHF------------AGQQTEFKILS 171 (210)
T ss_dssp CCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTCSSCEEEE------------EETCSEEEECC
T ss_pred CCCceEEEEEecCcCCCceEEEEcCCCCCccccCCeEEEEEEEEEecCCCCCCEEEe------------ccCceEEEEec
Confidence 478888887643 23579999999875322 135677765543332210 00112568999
Q ss_pred CCCCCEEEEEecc-------CCccceEEEECCC
Q 012311 127 LEYDTKYYYKIGS-------GDSSREFWFQTPP 152 (466)
Q Consensus 127 L~P~T~Y~Yrv~~-------~~~s~~~~F~T~p 152 (466)
|+|+|.|..||.. +.||+...|+|+.
T Consensus 172 L~p~t~Y~v~Vra~~~~g~wS~wS~~~~~~Tp~ 204 (210)
T 3n06_B 172 LHPGQKYLVQVRCKPDHGYWSAWSPATFIQIPS 204 (210)
T ss_dssp CCTTCEEEEEEEEEESSSCCCCCCCCEEEECCT
T ss_pred cCCCCEEEEEEEEecCCCcccCCCCceeEECcC
Confidence 9999999999964 2578889999964
|
| >2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=95.93 E-value=0.0051 Score=59.42 Aligned_cols=63 Identities=24% Similarity=0.279 Sum_probs=39.7
Q ss_pred EEEEEccCCCCCCcHHHHHHHHHh-----CCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCcee
Q 012311 161 KFGIIGDLGQTYNSLSTLEHYMES-----GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEI 235 (466)
Q Consensus 161 ~f~v~GD~g~~~~~~~tl~~~~~~-----~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~ 235 (466)
+++++||+|... ..+..+.+. ++|.++++||++.. +.. . .+..+.+..+ ..+++.+.||||.
T Consensus 2 ~i~vigDiHG~~---~~l~~ll~~~~~~~~~d~~v~lGD~vdr-G~~-----s--~~~l~~l~~l--~~~~~~v~GNHe~ 68 (280)
T 2dfj_A 2 ATYLIGDVHGCY---DELIALLHKVEFTPGKDTLWLTGDLVAR-GPG-----S--LDVLRYVKSL--GDSVRLVLGNHDL 68 (280)
T ss_dssp CEEEECCCCSCH---HHHHHHHHHTTCCTTTCEEEECSCCSSS-SSC-----H--HHHHHHHHHT--GGGEEECCCHHHH
T ss_pred eEEEEecCCCCH---HHHHHHHHHhCCCCCCCEEEEeCCcCCC-CCc-----c--HHHHHHHHhC--CCceEEEECCCcH
Confidence 689999999643 334444332 57899999999943 211 1 1223333333 2379999999996
Q ss_pred e
Q 012311 236 E 236 (466)
Q Consensus 236 ~ 236 (466)
.
T Consensus 69 ~ 69 (280)
T 2dfj_A 69 H 69 (280)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene} | Back alignment and structure |
|---|
Probab=95.92 E-value=0.015 Score=46.05 Aligned_cols=70 Identities=14% Similarity=0.302 Sum_probs=45.2
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCC-CCcEEEEeecCCCC-ceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKF-DFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYY 134 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~-~~~~V~yg~~~~~~-~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~ 134 (466)
.+|..+++.-.. .+++.|+|..+... ..-.|+|....+.. .... .. .+-...++|+||+|+|.|.
T Consensus 6 ~~P~~l~v~~~t--~~Si~lsW~~p~~~i~~Y~v~y~~~~~~~~~~~~-----~v------~~~~t~~~l~~L~p~t~Y~ 72 (97)
T 3qht_C 6 SVPTKLEVVAAT--PTSLLISWDASSSSVSYYRITYGETGGNSPVQEF-----TV------PGSSSTATISGLSPGVDYT 72 (97)
T ss_dssp CSSSSCEEEEEE--TTEEEEECCCCCSSCCEEEEEEEESSSCSCCEEE-----EE------ETTCCEEEECSCCTTCEEE
T ss_pred CCCCceEEEecC--CCEEEEEEeCCCCCCCEEEEEEEECCCCCccEEE-----Ee------CCCcCEEEeCCCCCCCEEE
Confidence 458888876543 57999999876322 23467787765431 1111 00 1122357899999999999
Q ss_pred EEecc
Q 012311 135 YKIGS 139 (466)
Q Consensus 135 Yrv~~ 139 (466)
.+|..
T Consensus 73 v~V~A 77 (97)
T 3qht_C 73 ITVYA 77 (97)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99975
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=95.89 E-value=0.078 Score=50.13 Aligned_cols=98 Identities=15% Similarity=0.127 Sum_probs=58.4
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCC-CCcEEEEeecCCCC-ceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKF-DFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYY 134 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~-~~~~V~yg~~~~~~-~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~ 134 (466)
.+|..+.+.... .+++.|+|..+... ..-.|+|....... .... .. ..-...++|++|+|+|.|.
T Consensus 22 ~~P~~l~~~~~~--~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~~-----~~------~~~~~~~~i~~L~p~t~Y~ 88 (290)
T 3r8q_A 22 PAPTDLKFTQVT--PTSLSAQWTPPNVQLTGYRVRVTPKEKTGPMKEI-----NL------APDSSSVVVSGLMVATKYE 88 (290)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSSCCCEEEEEEEESSSSSCCEEE-----EE------CTTCCEEEECSCCSSCEEE
T ss_pred CCCCceEEEECC--CCEEEEEEeCCCCCeeEEEEEEEeCCCCCceEEE-----Ec------CCCccEEEeCCCCCCCEEE
Confidence 568888886553 57999999987532 23467777655322 1111 10 1123357899999999999
Q ss_pred EEeccC-----CccceEEEECCCCCCCCCCeEEEEEcc
Q 012311 135 YKIGSG-----DSSREFWFQTPPKIDPDASYKFGIIGD 167 (466)
Q Consensus 135 Yrv~~~-----~~s~~~~F~T~p~~g~~~~~~f~v~GD 167 (466)
++|..- .......|+|.+.+.+...+++..+++
T Consensus 89 ~~V~a~~~~g~s~~s~~~~~t~~~~~~P~~l~~~~~~~ 126 (290)
T 3r8q_A 89 VSVYALKDTLTSRPAQGVVTTLENVSPPRRARVTDATE 126 (290)
T ss_dssp EEEEEEETTEECCCEEEEEECCCCCCCCEEEEEEEECS
T ss_pred EEEEEEeCCCCCCCcceeEecCCCCCCCceeEEEEcCC
Confidence 999652 111245688875443223344443343
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=95.84 E-value=0.036 Score=48.79 Aligned_cols=84 Identities=17% Similarity=0.170 Sum_probs=50.2
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCC-CCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYY 135 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~-~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Y 135 (466)
..|..+.+... ..+++.|+|.-+... ..-.|+|....+...... .. .+....++|+||+|+|.|.+
T Consensus 96 ~~P~~l~~~~~--~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~-----~~------~~~~~~~~i~~L~p~t~Y~~ 162 (186)
T 1qr4_A 96 GSPKGISFSDI--TENSATVSWTPPRSRVDSYRVSYVPITGGTPNVV-----TV------DGSKTRTKLVKLVPGVDYNV 162 (186)
T ss_dssp CCCSCEEEESC--CSSCEEEEECCCSSCCSEEEEEEEETTCCCCEEE-----EE------ETTCCEEEECSCCSSCEEEE
T ss_pred CCCCccEEEEe--CCCEEEEEEECCCCcccEEEEEEEeCCCCCceEE-----Ec------CCCcCEEEEcCCCCCCEEEE
Confidence 46777776643 357999999876432 234677776553222111 11 11224578999999999999
Q ss_pred EeccC---C--ccceEEEECCCC
Q 012311 136 KIGSG---D--SSREFWFQTPPK 153 (466)
Q Consensus 136 rv~~~---~--~s~~~~F~T~p~ 153 (466)
+|..- + ......|+|.|.
T Consensus 163 ~V~A~~~~g~s~p~~~~~~T~pd 185 (186)
T 1qr4_A 163 NIISVKGFEESEPISGILKTALD 185 (186)
T ss_dssp EEEEEETTEECCCEEEEEEC---
T ss_pred EEEEEcCCCcCcCEEEEEEecCC
Confidence 99752 1 233567888774
|
| >3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D* | Back alignment and structure |
|---|
Probab=95.80 E-value=0.029 Score=46.14 Aligned_cols=70 Identities=16% Similarity=0.351 Sum_probs=45.8
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCC-CCcEEEEeecCCCC-ceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKF-DFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYY 134 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~-~~~~V~yg~~~~~~-~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~ 134 (466)
.+|..+.+.-.. .+++.|+|..+... ..-.|+|....+.. .... .. .+....++|+||+|+|.|.
T Consensus 5 ~~P~~L~v~~~t--~~Sv~lsW~~p~g~i~~Y~v~y~~~~~~~~~~~~-----~v------~~~~ts~~l~gL~P~T~Y~ 71 (114)
T 3qwq_B 5 DVPRDLEVVAAT--PTSLLISWDSGRGSYQYYRITYGETGGNSPVQEF-----TV------PGPVHTATISGLKPGVDYT 71 (114)
T ss_dssp CCCEEEEEEEEE--TTEEEEEEECCSCCCSEEEEEEEESSCSSCCEEE-----EE------ETTCCEEEECSCCTTCEEE
T ss_pred CCCCceEEEecC--CCEEEEEEcCCcCcccEEEEEEEECCCCCccEEE-----Ee------CCCcCEEEeCCCCCCCEEE
Confidence 468888887543 57999999986422 23468888765431 1111 11 1112347999999999999
Q ss_pred EEecc
Q 012311 135 YKIGS 139 (466)
Q Consensus 135 Yrv~~ 139 (466)
.+|..
T Consensus 72 v~V~A 76 (114)
T 3qwq_B 72 ITVYA 76 (114)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99864
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=95.79 E-value=0.032 Score=50.25 Aligned_cols=88 Identities=25% Similarity=0.439 Sum_probs=53.7
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~ 132 (466)
..|..+.+...+...+++.|+|.-+...+ .-.|+|....+...... ..... .+-...++|++|+|+|.
T Consensus 107 ~~P~~~~~~~~~~s~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~--~~~~~------~~~~~~~~i~~L~p~t~ 178 (211)
T 3p4l_A 107 SPPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDW--VIEPV------VGNRLTHQIQELTLDTP 178 (211)
T ss_dssp SCCEEEEEEEETTEEEEEEEEEECCTTCCSCCCEEEEEEESCTTSCGGGS--EEEEE------ESSCSEEEECCCCTTCE
T ss_pred CCCcceEEEecCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCce--EEEEe------cCCeeEEEEcCCCCCCE
Confidence 36888888766422579999999765332 23567765544321100 00000 11223578999999999
Q ss_pred EEEEecc------CCccceEEEECCC
Q 012311 133 YYYKIGS------GDSSREFWFQTPP 152 (466)
Q Consensus 133 Y~Yrv~~------~~~s~~~~F~T~p 152 (466)
|.+||.. +.+|+...|+|..
T Consensus 179 Y~~~V~A~n~~G~g~~S~~v~~~~~~ 204 (211)
T 3p4l_A 179 YYFKIQARNSKGMGPMSEAVQFRTPK 204 (211)
T ss_dssp EEEEEEEEETTEECCCCCCEEEECC-
T ss_pred EEEEEEEEcCCccCCCCCCEEccCcc
Confidence 9999954 3467777887764
|
| >1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.79 E-value=0.05 Score=45.26 Aligned_cols=75 Identities=16% Similarity=0.178 Sum_probs=48.1
Q ss_pred CCCcEEEEEEcCCCCC---CcEEEEeecCC----CCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEEEecc---
Q 012311 70 DGKAVIISWVTPHEPG---PSTVSYGTSAD----KFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGS--- 139 (466)
Q Consensus 70 ~~~~~~V~W~t~~~~~---~~~V~yg~~~~----~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Yrv~~--- 139 (466)
.++++.|+|..+...+ .-.|.|..... ..+.... . ...-...++|+||+|+|.|..+|..
T Consensus 28 sstsi~vsW~~~~~~g~i~gY~V~Y~~~~~~~~~~~~~~~~-----v-----~~~~~~~~~l~~L~p~T~Y~~~V~A~n~ 97 (120)
T 1ujt_A 28 TPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATSSWQNLD-----A-----KVPTERSAVLVNLKKGVTYEIKVRPYFN 97 (120)
T ss_dssp BTTEEEEEEEESSCCSSCCEEEEEEEESSSSSTTTCCEEEE-----C-----CCTTCCEEEEESCCSSEEEEEEEEEESS
T ss_pred cCceEEEEEccCCCCCcEeeEEEEEEECCCCCCCCccEEEE-----e-----cCCCcCEEEECCCCCCCEEEEEEEEECC
Confidence 3589999999642111 23788887654 1111110 0 1112346899999999999999953
Q ss_pred ---CCccceEEEECCCCC
Q 012311 140 ---GDSSREFWFQTPPKI 154 (466)
Q Consensus 140 ---~~~s~~~~F~T~p~~ 154 (466)
|..|+...|+|+...
T Consensus 98 ~G~Gp~S~~v~~~T~e~v 115 (120)
T 1ujt_A 98 EFQGMDSESKTVRTTEES 115 (120)
T ss_dssp SCCCCCCCCEEEEECSSC
T ss_pred CccCCCCCCEEEECCCCC
Confidence 356888899998643
|
| >2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.78 E-value=0.032 Score=46.35 Aligned_cols=71 Identities=15% Similarity=0.331 Sum_probs=45.5
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCC-CCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYY 135 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~-~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Y 135 (466)
.+|..+.+.... .+++.|+|.-+... ..-.|+|....+..... .... .+-...++|+||+|+|.|.+
T Consensus 30 ~~P~~l~v~~~t--~~Si~lsW~~p~~~i~~Y~V~y~~~~~~~~~~----~~~v------~~~~t~~~l~gL~P~t~Y~~ 97 (121)
T 2ocf_D 30 DVPTKLEVVAAT--PTSLLISWDAPAVTVRYYRITYGETGGNSPVQ----EFTV------PGSKSTATISGLKPGVDYTI 97 (121)
T ss_dssp CSCEEEEEEEEC--SSCEEEEEECCSSCCCEEEEEEEETTTCSCBE----EEEE------ETTCCEEEECCCCTTCEEEE
T ss_pred CCCCccEEEecC--CCEEEEEEcCCCCCCcEEEEEEEECCCCCccE----EEEe------CCCcCEEEeCCCCCCCEEEE
Confidence 468888887643 57999999876422 23467787655422110 0000 11123578999999999999
Q ss_pred Eecc
Q 012311 136 KIGS 139 (466)
Q Consensus 136 rv~~ 139 (466)
+|..
T Consensus 98 ~V~A 101 (121)
T 2ocf_D 98 TVYA 101 (121)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9975
|
| >1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.77 E-value=0.064 Score=41.76 Aligned_cols=82 Identities=18% Similarity=0.233 Sum_probs=48.9
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCC-CCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEEE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~-~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Yr 136 (466)
+|..+++..-. .+++.|+|.-+... ..-.|+|....+.. ..... ...+-...++|+||+|||.|.++
T Consensus 4 ~P~~l~~~~~~--~~si~lsW~~p~~~i~~Y~v~y~~~~~~~-------~~~~~---~~~~~~~~~~l~~L~p~t~Y~~~ 71 (94)
T 1j8k_A 4 RPKGLAFTDVD--VDSIKIAWESPQGQVSRYRVTYSSPEDGI-------HELFP---APDGEEDTAELQGLRPGSEYTVS 71 (94)
T ss_dssp CCCCCEEEEEE--TTEEEEECCCCSSCCSCEEEEEEETTTEE-------EEECC---CCCSSCCEEEECSCCCCSEEEEE
T ss_pred CCCccEEEeec--CCEEEEEEcCCCCCcceEEEEEEeCCCCC-------ceEEe---cCCCCccEEEeCCCCCCCEEEEE
Confidence 47777776543 47999999665321 23467787654310 00000 01122346799999999999999
Q ss_pred eccC---Ccc--ceEEEECC
Q 012311 137 IGSG---DSS--REFWFQTP 151 (466)
Q Consensus 137 v~~~---~~s--~~~~F~T~ 151 (466)
|..- +.| ....++|.
T Consensus 72 V~A~~~~g~s~p~~~~~~T~ 91 (94)
T 1j8k_A 72 VVALHDDMESQPLIGTQSTA 91 (94)
T ss_dssp EEECSSSCCCCCEEEEEECC
T ss_pred EEEEcCCCcCCCEEeEEEec
Confidence 9753 122 24456665
|
| >1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.76 E-value=0.02 Score=46.26 Aligned_cols=71 Identities=14% Similarity=0.225 Sum_probs=44.8
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC-----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG-----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~-----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T 131 (466)
.+|..+.++... .+++.|+|.-+...+ .-.|+|....+..+..+.. .......++|++|+|+|
T Consensus 10 ~~P~~l~~~~~~--~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~w~~~~~----------~~~~~~~~~v~~L~p~t 77 (111)
T 1x5y_A 10 SAPQHLTVEDVT--DTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANK----------EPVERCGFTVKDLPTGA 77 (111)
T ss_dssp CCCEEEEEEEEC--SSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESSS----------SCBSSSEEEEECCCTTC
T ss_pred cCCCCCEEEecc--CCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEccc----------cCCcccEEEECCCCCCC
Confidence 468888776543 579999999765322 2356776654432222110 01112346889999999
Q ss_pred EEEEEecc
Q 012311 132 KYYYKIGS 139 (466)
Q Consensus 132 ~Y~Yrv~~ 139 (466)
.|.|||..
T Consensus 78 ~Y~frV~A 85 (111)
T 1x5y_A 78 RILFRVVG 85 (111)
T ss_dssp CEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999975
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=95.74 E-value=0.079 Score=47.54 Aligned_cols=98 Identities=12% Similarity=0.187 Sum_probs=55.0
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCC--CCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEP--GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYY 135 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~--~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Y 135 (466)
.|..+.+... ..+++.|+|..+... ..-.|+|....+....... .. ..-...++|++|+|+|.|.+
T Consensus 25 ~P~~l~~~~~--~~~sv~lsW~~p~~~~i~~Y~v~~~~~~~~~~~~~~----~~------~~~~~~~~i~~L~p~t~Y~~ 92 (203)
T 2gee_A 25 QPTDLSFVDI--TDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFED----FV------DSSVGYYTVTGLEPGIDYDI 92 (203)
T ss_dssp CCEEEEEECC--TTTCEEEEEECCSSSSCCEEEEEEEESSSSSCCEEE----EE------ETTCCEEEECSCCTTCEEEE
T ss_pred CCCccEEEec--CCCEEEEEecCCCCCCccEEEEEEEECCCCCCceeE----Ec------CCCccEEEeCCCCCCCEEEE
Confidence 3666666544 357999999987531 1346777766543221110 00 11122568999999999999
Q ss_pred EeccC---CccceEEEECCCCCCCCCCeEEEEEcc
Q 012311 136 KIGSG---DSSREFWFQTPPKIDPDASYKFGIIGD 167 (466)
Q Consensus 136 rv~~~---~~s~~~~F~T~p~~g~~~~~~f~v~GD 167 (466)
+|..- +.|....++|.+.+.+...+++..+++
T Consensus 93 ~V~a~~~~g~s~~~~~~t~~~~p~P~~l~~~~~~~ 127 (203)
T 2gee_A 93 SVYTVKNGGESTPTTLTQQTAVPPPTDLRFTNIGP 127 (203)
T ss_dssp EEEEESSSCBCCCEEEEEECCCCCCEEEEEEEEET
T ss_pred EEEEEeCCCccccEeeeecCCCcCCCceEEEEcCC
Confidence 99652 334444455433322223455554444
|
| >3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* | Back alignment and structure |
|---|
Probab=95.73 E-value=0.03 Score=59.02 Aligned_cols=83 Identities=22% Similarity=0.288 Sum_probs=51.2
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC----CcEEEEeecCCCC-ceEEEeEEEEeeeeccccceEEEEEecCCCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKF-DFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~----~~~V~yg~~~~~~-~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T 131 (466)
..|..+.+.. ...+++.|+|..+..++ .-.|+|....+.. .....+ ....++|+||+|+|
T Consensus 442 ~~Ps~~~~~~--~s~tSV~LsW~pP~~~ng~I~~Y~V~y~~~~~~~~~~~v~~-------------~~ts~~l~gL~P~T 506 (536)
T 3fl7_A 442 TEPPKVRLEG--RSTTSLSVSWSIPPPQQSRVWKYEVTYRKKGDSNSYNVRRT-------------EGFSVTLDDLAPDT 506 (536)
T ss_dssp CCCCEEEEEE--CCC-CCEEEEECCTTTTTTCSEEEEEEEEC--CCCCEEEEE-------------SSSEEECCSCCSSC
T ss_pred cCCCCCceee--ccCCeEEEEEECCcCCCCcccEEEEEEEECCCCceEEEEcC-------------CCCEEEECCCCCCC
Confidence 3577776632 23689999999774332 2367777655431 111111 11246899999999
Q ss_pred EEEEEecc------CCccceEEEECCCCC
Q 012311 132 KYYYKIGS------GDSSREFWFQTPPKI 154 (466)
Q Consensus 132 ~Y~Yrv~~------~~~s~~~~F~T~p~~ 154 (466)
.|.+||.. +.+|+...|+|++..
T Consensus 507 ~Y~frVrA~n~~G~Gp~S~~v~~~T~~~~ 535 (536)
T 3fl7_A 507 TYLVQVQALTQEGQGAGSKVHEFQTLSPE 535 (536)
T ss_dssp EEEEEEEEECC---CEECCCEEEECCC--
T ss_pred EEEEEEEEEcCCcccCCCCCEEEEeCCCC
Confidence 99999964 246888899998754
|
| >1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A | Back alignment and structure |
|---|
Probab=95.65 E-value=0.066 Score=48.29 Aligned_cols=86 Identities=13% Similarity=0.088 Sum_probs=54.0
Q ss_pred CCCceEEEeeecC----CCCcEEEEEEcCCCCC----CcEEEEe-ecCCCCceEEEeEEEEeeeeccccceEEEEEecCC
Q 012311 57 NSPQQVHITQGDY----DGKAVIISWVTPHEPG----PSTVSYG-TSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGL 127 (466)
Q Consensus 57 ~~P~qv~lt~~~~----~~~~~~V~W~t~~~~~----~~~V~yg-~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL 127 (466)
.+|..+.+....+ ..+++.|+|..+...+ .-.|+|. ...+..+..+.- . ......+.|.+|
T Consensus 110 ~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~~~~----~------~~~~~~~~l~~L 179 (215)
T 1cd9_B 110 EPPMLQALDIGPDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVFH----L------PSSKDQFELCGL 179 (215)
T ss_dssp CCCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEEEEE----E------ESCEEEEEECCC
T ss_pred CCCcEEEEEEeccccCCCCCeEEEEEeCCCCCCeEEEEEEEEEccCCCCCCcEEEec----c------cCcceEEEEcCC
Confidence 4688777665311 3578999998774322 2357787 444433332211 0 112345789999
Q ss_pred CCCCEEEEEecc------C---CccceEEEECCC
Q 012311 128 EYDTKYYYKIGS------G---DSSREFWFQTPP 152 (466)
Q Consensus 128 ~P~T~Y~Yrv~~------~---~~s~~~~F~T~p 152 (466)
+|+|+|..||.. + .||+...|+|+.
T Consensus 180 ~p~t~Y~~~Vra~~~~g~G~wS~wS~~~~~~T~e 213 (215)
T 1cd9_B 180 HQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRPTM 213 (215)
T ss_dssp CSCSCEEEEEEEEESSSCCCCCCCCCCEEECCCC
T ss_pred CCCCEEEEEEEeeECCCCCCCcCCCCccceecCC
Confidence 999999999853 2 367888899875
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=95.60 E-value=0.074 Score=47.50 Aligned_cols=84 Identities=19% Similarity=0.167 Sum_probs=50.6
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC----CcEEEEeecCC-CCceEEEeEEEEeeeeccccceEEEEEecCCCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSAD-KFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~----~~~V~yg~~~~-~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T 131 (466)
.+|..+.+.. ..+++.|+|.-+...+ .-.|+|....+ ..+........ +....+.+ +|+|+|
T Consensus 7 ~~P~~~~~~~---~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~---------~~~~~~~~-~L~p~t 73 (205)
T 1cfb_A 7 NAPKLTGITC---QADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKVP---------NTDSSFVV-QMSPWA 73 (205)
T ss_dssp CCCEEEEEEE---CSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEEEE---------TTCSEEEE-ECCSSE
T ss_pred CCCCCcEEEe---cCCEEEEEEECcccCCCceEEEEEEEecCCCCCCceeeeeccC---------CCceEEEE-eCCCCC
Confidence 4688888876 3689999999874322 23577766532 22222211110 11113446 999999
Q ss_pred EEEEEecc------CCcc-ceEEEECCCC
Q 012311 132 KYYYKIGS------GDSS-REFWFQTPPK 153 (466)
Q Consensus 132 ~Y~Yrv~~------~~~s-~~~~F~T~p~ 153 (466)
.|.+||.. +..| ....|+|.+.
T Consensus 74 ~Y~~~V~A~n~~G~~~~s~~~~~~~T~~~ 102 (205)
T 1cfb_A 74 NYTFRVIAFNKIGASPPSAHSDSCTTQPD 102 (205)
T ss_dssp EEEEEEEEEETTEECCCCCCCCCEEECCC
T ss_pred EEEEEEEEEECCccCCCCCCceeEEcCCc
Confidence 99999964 2345 4467888764
|
| >3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.56 E-value=0.018 Score=46.31 Aligned_cols=70 Identities=16% Similarity=0.301 Sum_probs=45.0
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCC----CCcEEEEeecCCC-CceEEEeEEEEeeeeccccceEEEEEecCCCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEP----GPSTVSYGTSADK-FDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~----~~~~V~yg~~~~~-~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T 131 (466)
.+|..+++.--. .+++.|+|..+... ..-.|+|...... ..... .. ..-...++|+||+|+|
T Consensus 9 ~~P~~l~v~~~t--~~Sv~lsW~~p~~~~g~i~~Y~v~y~~~~~~~~~~~~-----~v------~~~~ts~~l~~L~p~t 75 (103)
T 3t04_D 9 SVPTKLEVVDAT--PTSLKISWDAYYSSWQNVKYYRITYGETGGDSPVQEF-----TV------PGYYSTATISGLKPGV 75 (103)
T ss_dssp CCCCSCEEEEEE--TTEEEEECTTTTTTSCCCCEEEEEEEETTCSSCCEEE-----EE------ETTCCEEEECSCCTTC
T ss_pred CCCceeEEEecC--CCEEEEEccCCCCCCCccceEEEEEEECCCCCccEEE-----Ec------CCCcCEEEeCCCCCCC
Confidence 468888886543 57999999877532 1236888876422 11111 00 1123457999999999
Q ss_pred EEEEEecc
Q 012311 132 KYYYKIGS 139 (466)
Q Consensus 132 ~Y~Yrv~~ 139 (466)
.|..+|..
T Consensus 76 ~Y~~~V~A 83 (103)
T 3t04_D 76 DYTITVYA 83 (103)
T ss_dssp CEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999865
|
| >3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic} | Back alignment and structure |
|---|
Probab=95.56 E-value=0.047 Score=43.32 Aligned_cols=68 Identities=18% Similarity=0.294 Sum_probs=43.2
Q ss_pred CceEEEeeecCCCCcEEEEEEcCCCCC-CcEEEEeecCCC-CceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEEE
Q 012311 59 PQQVHITQGDYDGKAVIISWVTPHEPG-PSTVSYGTSADK-FDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (466)
Q Consensus 59 P~qv~lt~~~~~~~~~~V~W~t~~~~~-~~~V~yg~~~~~-~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Yr 136 (466)
|..+.++- ...+++.|+|..+..+- .-.|+|....+. ..... .. .+-.-.++|+||+|+|.|.++
T Consensus 5 P~~l~v~~--~t~~Sv~lsW~~p~~~i~~Y~v~y~~~~~~~~~~~~-----~~------~~~~t~~~l~gL~P~t~Y~~~ 71 (98)
T 3tes_A 5 PKNLVVSE--VTEDSLRLSWTAPDAAFDSFMIQYQESEKVGEAINL-----TV------PGSERSYDLTGLKPGTEYTVS 71 (98)
T ss_dssp CEEEEEES--CCSSCEEEEEECCTTSCSEEEEEEEETTBCSCCEEE-----EE------ETTCSEEEECSCCTTCEEEEE
T ss_pred CCceEEEe--cCCCeEEEEecCCcCccceEEEEEEECCCCCceEEE-----Ec------CCCcCEEEECCCCCCCEEEEE
Confidence 77776653 34689999999875322 346778775421 11111 10 111234789999999999999
Q ss_pred ecc
Q 012311 137 IGS 139 (466)
Q Consensus 137 v~~ 139 (466)
|..
T Consensus 72 V~A 74 (98)
T 3tes_A 72 IYG 74 (98)
T ss_dssp EEE
T ss_pred EEE
Confidence 975
|
| >3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B* | Back alignment and structure |
|---|
Probab=95.53 E-value=0.059 Score=50.08 Aligned_cols=86 Identities=20% Similarity=0.245 Sum_probs=56.1
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC------CcEEEEeecCC-CCceEEEeEEEEeeeeccccceEEEEEecCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG------PSTVSYGTSAD-KFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEY 129 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~------~~~V~yg~~~~-~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P 129 (466)
.+|..+.+..... ..++.|+|..+..+. .-.|+|....+ ..+..+.. ......+.+.+|+|
T Consensus 114 dPP~nLtv~~~~~-~~~l~LsW~~P~~~~~~~~~L~YEVrYr~~~~~~~W~~v~~-----------~~t~~~i~l~~L~P 181 (223)
T 3up1_A 114 EAPFDLSVVYREG-ANDFVVTFNTSHLQKKYVKVLMHDVAYRQEKDENKWTHVNL-----------SSTKLTLLQRKLQP 181 (223)
T ss_dssp CCCEEEEEEEETT-TTEEEEEEECGGGGCSSSCCEEEEEEEEESSCSSCCEEEEE-----------SSSEEEEEGGGSCT
T ss_pred CCCcceEEEEEcC-CCCEEEEECCCCCCCCcceeEEEEEEEEeCCCCCceEEEEe-----------cCceeEEeccccCC
Confidence 5799898887653 457999999874221 23577777642 22322211 11223456789999
Q ss_pred CCEEEEEecc-------C---CccceEEEECCCCC
Q 012311 130 DTKYYYKIGS-------G---DSSREFWFQTPPKI 154 (466)
Q Consensus 130 ~T~Y~Yrv~~-------~---~~s~~~~F~T~p~~ 154 (466)
+|.|..||.. + .||....|+|++.+
T Consensus 182 gt~Y~vqVR~r~~~~~~G~WSeWS~~~~~~T~~~~ 216 (223)
T 3up1_A 182 AAMYEIKVRSIPDHYFKGFWSEWSPSYYFRTPEIN 216 (223)
T ss_dssp TCEEEEEEEEEECSSCCBCCCCCCCCEEEECCCCC
T ss_pred CcEEEEEEEEeeCCCCCCCCCCCCCCeEEECCCCC
Confidence 9999999852 1 46778899998753
|
| >3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.53 E-value=0.052 Score=48.78 Aligned_cols=89 Identities=15% Similarity=0.214 Sum_probs=52.8
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCC-CCc----EEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEP-GPS----TVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~-~~~----~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T 131 (466)
..|..+.+... ..++.++|..+... +.+ .|+|...+...+....-... ....-...+|.+|+|++
T Consensus 115 ~~p~~~~~~~~---~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~~~-------~~~~~~~l~i~~L~~~~ 184 (215)
T 3mtr_A 115 SSPSIDQVEPY---SSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAK-------EASMEGIVTIVGLKPET 184 (215)
T ss_dssp CCCEEEEEEEE---TTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEEHH-------HHHHHTEEEEECCCTTC
T ss_pred CCCcceEEEEe---cceEEEEEecCCccCCCceEEEEEEEEECCCCcccccccccc-------cccccccEEECCCCCCC
Confidence 45666665433 46899999865322 222 47777666544432211100 00011457899999999
Q ss_pred EEEEEecc------CCccceEEEECCCCCC
Q 012311 132 KYYYKIGS------GDSSREFWFQTPPKID 155 (466)
Q Consensus 132 ~Y~Yrv~~------~~~s~~~~F~T~p~~g 155 (466)
.|.|||.. +..|....|+|+|..|
T Consensus 185 ~y~~~~~A~N~~G~s~~S~~~~v~T~p~~g 214 (215)
T 3mtr_A 185 TYAVRLAALNGKGLGEISAASEFKTQPVQG 214 (215)
T ss_dssp EEEEEEEEEESSCBCCCCCCEEEECCC---
T ss_pred EEEEEEEEEeCCcccCcccceeeEeccccC
Confidence 99999964 2467788899998754
|
| >3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=95.47 E-value=0.062 Score=43.43 Aligned_cols=81 Identities=19% Similarity=0.287 Sum_probs=46.1
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCCCcEEEEeecC-CC-CceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPGPSTVSYGTSA-DK-FDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYY 134 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~~~~V~yg~~~-~~-~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~ 134 (466)
.+|..+.++... ..+++.++|...... ....-|+... +. ....+.+ .. .. ..+.++|+||++|+
T Consensus 6 ~aP~~l~a~~~~-~~~~v~LsW~~~~~~-~~Y~VyR~~~~~~~~~~i~~~-~~-------~t----sy~d~~l~~g~~Y~ 71 (103)
T 3mpc_A 6 AFPTGLSAVLDS-SGNTANLTWNAAPGA-NSYNVKRSTKSGGPYTTIATN-IT-------ST----NYTDTGVATGTKYY 71 (103)
T ss_dssp CCCEEEEEEECT-TSCCEEEEEECCTTC-SEEEEEEESSTTCCCEEEEEE-EC-------SS----EEEETTCCTTCCCE
T ss_pred CCCceeEEEEeC-CCCEEEEEEECCCCC-CEEEEEEecCCCCCcEEEeec-CC-------CC----EEEECCCCCCCEEE
Confidence 468888776532 246899999986433 4444455433 22 2222221 10 00 12457999999999
Q ss_pred EEeccC------CccceEEEECC
Q 012311 135 YKIGSG------DSSREFWFQTP 151 (466)
Q Consensus 135 Yrv~~~------~~s~~~~F~T~ 151 (466)
|+|..- ..|...+.+++
T Consensus 72 Y~V~Avn~~geS~~S~~vs~~~~ 94 (103)
T 3mpc_A 72 YVVSAVSNGVETLNSAEAILQYP 94 (103)
T ss_dssp EEEEEEETTEECCCCCCEECBCC
T ss_pred EEEEEEeCcCCcCCCccEEEECC
Confidence 999642 23555555444
|
| >1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.37 E-value=0.029 Score=45.95 Aligned_cols=59 Identities=17% Similarity=0.224 Sum_probs=37.6
Q ss_pred CCcEEEEEEcCCCC-----CCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEEEecc
Q 012311 71 GKAVIISWVTPHEP-----GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGS 139 (466)
Q Consensus 71 ~~~~~V~W~t~~~~-----~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Yrv~~ 139 (466)
.+++.|+|..+... ..-.|+|....+..+..+... ....-.++|+||+|||.|.|||..
T Consensus 24 ~~sv~L~W~~P~~~gg~~i~~Y~Ve~~~~~~~~w~~~~~~----------~~~~~~~~v~~L~p~t~Y~frV~A 87 (112)
T 1bpv_A 24 RHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFS----------NILENEFTVSGLTEDAAYEFRVIA 87 (112)
T ss_dssp TTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECCCS----------CCCSSEEEECSCCSSCCEEEEEEE
T ss_pred CCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEeecc----------cCccCEEEECCCCCCCEEEEEEEE
Confidence 57999999854321 235788887654434332110 011123689999999999999975
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=95.37 E-value=0.093 Score=46.04 Aligned_cols=91 Identities=13% Similarity=0.215 Sum_probs=54.9
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCC-CCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYY 135 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~-~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Y 135 (466)
.+|..+++.... .+++.|+|.-+... ..-.|+|....+. ... ... ......++|+||+|+|.|.+
T Consensus 8 ~~P~~l~~~~~~--~~sv~l~W~~p~~~i~~Y~v~~~~~~~~-~~~-----~~~------~~~~~~~~i~~L~p~t~Y~~ 73 (186)
T 1qr4_A 8 DNPKDLEVSDPT--ETTLSLRWRRPVAKFDRYRLTYVSPSGK-KNE-----MEI------PVDSTSFILRGLDAGTEYTI 73 (186)
T ss_dssp CCCEEEEEESCC--SSEEEEEEECCSSCCSEEEEEEECTTCC-EEE-----EEE------CTTCSEEEEESCCSSCEEEE
T ss_pred cCCCceEEEecC--CCEEEEEEeCCCCCccEEEEEEEeCCCC-eeE-----EEC------CCCCCEEEECCCCCCCEEEE
Confidence 468888877543 57999999976432 2346777743321 111 011 11122468899999999999
Q ss_pred EeccC---Ccc--ceEEEECCCCCCCCCCeEEE
Q 012311 136 KIGSG---DSS--REFWFQTPPKIDPDASYKFG 163 (466)
Q Consensus 136 rv~~~---~~s--~~~~F~T~p~~g~~~~~~f~ 163 (466)
+|..- ..| ....++|+|.+ ...+++.
T Consensus 74 ~V~a~~~~~~s~~~~~~~~t~p~~--P~~l~~~ 104 (186)
T 1qr4_A 74 SLVAEKGRHKSKPTTIKGSTVVGS--PKGISFS 104 (186)
T ss_dssp EEEEESSSCBCCCEEEEEECCCCC--CSCEEEE
T ss_pred EEEEEcCCccCCCEEEEEECCCCC--CCccEEE
Confidence 99652 222 35678887653 2345544
|
| >2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* | Back alignment and structure |
|---|
Probab=95.36 E-value=0.014 Score=57.09 Aligned_cols=66 Identities=18% Similarity=0.193 Sum_probs=39.7
Q ss_pred eEEEEEccCCCCCCcHHHHHHHHHh----CCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcC--CeEEcCCCc
Q 012311 160 YKFGIIGDLGQTYNSLSTLEHYMES----GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQ--PWIWSAGNH 233 (466)
Q Consensus 160 ~~f~v~GD~g~~~~~~~tl~~~~~~----~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~--P~~~~~GNH 233 (466)
.+++++||.|... ..+.++.+. ..+.++++||++..... . .+....+..+.... .++.+.|||
T Consensus 50 ~~i~viGDIHG~~---~~L~~ll~~~~~~~~~~~vflGD~VDRG~~------s--~evl~lL~~lk~~~p~~v~~lrGNH 118 (309)
T 2ie4_C 50 CPVTVCGDVHGQF---HDLMELFRIGGKSPDTNYLFMGDYVDRGYY------S--VETVTLLVALKVRYRERITILRGNH 118 (309)
T ss_dssp SSEEEECCCTTCH---HHHHHHHHHHCCTTTSCEEECSCCSSSSTT------H--HHHHHHHHHHHHHCTTTEEECCCTT
T ss_pred CCEEEEecCCCCH---HHHHHHHHHcCCCCCCEEEEeCCccCCCCC------h--HHHHHHHHHHHhhCCCcEEEEeCCC
Confidence 4689999999643 233343332 56778999999953211 1 12233333332223 489999999
Q ss_pred eee
Q 012311 234 EIE 236 (466)
Q Consensus 234 E~~ 236 (466)
|..
T Consensus 119 E~~ 121 (309)
T 2ie4_C 119 ESR 121 (309)
T ss_dssp SST
T ss_pred CHH
Confidence 975
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=95.32 E-value=0.13 Score=48.12 Aligned_cols=97 Identities=15% Similarity=0.221 Sum_probs=58.5
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCC-CCCCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPH-EPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYY 135 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~-~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Y 135 (466)
.+|..+.+.... .+++.|+|.-+. ....-.|+|.......... .... ......+.|++|+|+|.|.+
T Consensus 16 ~~P~~l~~~~~~--~~sv~l~W~~~~~~~~~Y~v~~~~~~~~~~~~----~~~~------~~~~~~~~i~~L~p~t~Y~~ 83 (283)
T 1tdq_A 16 DGPTQILVRDVS--DTVAFVEWTPPRAKVDFILLKYGLVGGEGGKT----TFRL------QPPLSQYSVQALRPGSRYEV 83 (283)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSSCCSEEEEEEEESSSSCCCE----EEEE------CTTCSEEEECSCCTTCEEEE
T ss_pred CCCcEEEEEecC--CCeEEEEEECCCCceeEEEEEEEEecCCCCcE----EEEe------CCCCCEEEecCCCCCCEEEE
Confidence 468888876553 479999999875 2223478886543221110 0111 11233578999999999999
Q ss_pred EeccC-----CccceEEEECCCCCCCCCCeEEEEEcc
Q 012311 136 KIGSG-----DSSREFWFQTPPKIDPDASYKFGIIGD 167 (466)
Q Consensus 136 rv~~~-----~~s~~~~F~T~p~~g~~~~~~f~v~GD 167 (466)
+|..- ..+....|+|+|.+ ...+++..+++
T Consensus 84 ~V~a~~~~g~s~~~~~~~~t~p~~--P~~l~~~~~~~ 118 (283)
T 1tdq_A 84 SISAVRGTNESDASSTQFTTEIDA--PKNLRVGSRTA 118 (283)
T ss_dssp EEEEEETTEECCCEEEEEECCCCC--CEEEEEEEECS
T ss_pred EEEEECCCCCCCCeeEEEECCCCC--CCceEEEecCC
Confidence 99752 12345678887753 23455544444
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=95.30 E-value=0.14 Score=48.40 Aligned_cols=95 Identities=16% Similarity=0.165 Sum_probs=56.9
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCC-CCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYY 135 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~-~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Y 135 (466)
.+|..+.+.... .+++.|+|..+... ..-.|+|....+...... .. ......++|+||+|+|.|.+
T Consensus 114 ~~P~~l~~~~~~--~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~-----~~------~~~~~~~~i~~L~p~t~Y~~ 180 (290)
T 3r8q_A 114 SPPRRARVTDAT--ETTITISWRTKTETITGFQVDAVPANGQTPIQR-----TI------KPDVRSYTITGLQPGTDYKI 180 (290)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSCCCCEEEEEEEESSSCCCEEE-----EE------CTTCSEEEECSCCTTCEEEE
T ss_pred CCCceeEEEEcC--CCeEEEEEeCCCCcccEEEEEEEECCCCcceEE-----ec------CCCccEEEECCCCCCCEEEE
Confidence 568888877543 57999999987532 235677776554322111 10 11222478999999999999
Q ss_pred EeccC---C--ccceEEEECCCCCCCCCCeEEEEEc
Q 012311 136 KIGSG---D--SSREFWFQTPPKIDPDASYKFGIIG 166 (466)
Q Consensus 136 rv~~~---~--~s~~~~F~T~p~~g~~~~~~f~v~G 166 (466)
+|..- + ......++|+|.+ ...+++..++
T Consensus 181 ~V~A~n~~g~s~~~~~~~~t~p~~--P~~l~~~~~~ 214 (290)
T 3r8q_A 181 YLYTLNDNARSSPVVIDASTAIDA--PSNLRFLATT 214 (290)
T ss_dssp EEEEEETTEECCCEEEEEECCCCC--CEEEEEEEEE
T ss_pred EEEEEeCCcccCCEEEEecCCCCC--CCccEEEeeC
Confidence 99642 1 2234567777653 2345554443
|
| >2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A | Back alignment and structure |
|---|
Probab=95.21 E-value=0.044 Score=49.28 Aligned_cols=70 Identities=13% Similarity=0.220 Sum_probs=43.8
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCC-CCcEEEEeecCCCC-ceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKF-DFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYY 134 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~-~~~~V~yg~~~~~~-~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~ 134 (466)
.+|..+++.... .+++.|+|..+... ..-.|.|....... .... .. ..-...++|+||+|+|+|.
T Consensus 105 ~~P~~l~v~~~t--~~si~l~W~~p~~~i~~Y~v~y~~~~~~~~~~~~-----~v------~~~~t~~~l~gL~p~t~Y~ 171 (195)
T 2qbw_A 105 SVPTNLEVVAAT--PTSLLISWDASYYGVSYYRITYGETGGNSPVQEF-----TV------PYSSSTATISGLKPGVDYT 171 (195)
T ss_dssp CSSCCCEEEEEE--TTEEEEECCCCCSSCSEEEEEEEETTCCSCCEEE-----EE------ETTCSEEEECSCCTTCEEE
T ss_pred CCCcccEEEeCC--CCEEEEEEeCCCCCccEEEEEEEECCCCCcceEE-----Ee------CCCCCEEEeCCCCCCCEEE
Confidence 457777776543 57999999766422 23467787654321 1111 00 1112457999999999999
Q ss_pred EEecc
Q 012311 135 YKIGS 139 (466)
Q Consensus 135 Yrv~~ 139 (466)
++|..
T Consensus 172 ~~V~A 176 (195)
T 2qbw_A 172 ITVYA 176 (195)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99965
|
| >2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A | Back alignment and structure |
|---|
Probab=95.20 E-value=0.035 Score=55.07 Aligned_cols=67 Identities=21% Similarity=0.185 Sum_probs=41.2
Q ss_pred CeEEEEEccCCCCCCcHHHHHHHHHh------------CCCEEEEcccccccccccccccchhHHHHHHHHHHH-----h
Q 012311 159 SYKFGIIGDLGQTYNSLSTLEHYMES------------GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERS-----A 221 (466)
Q Consensus 159 ~~~f~v~GD~g~~~~~~~tl~~~~~~------------~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l-----~ 221 (466)
..+++++||+|... ..+..+.+. ++|.++++||++..... . .+....+..+ .
T Consensus 70 ~~~i~vigDiHG~~---~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~------s--~evl~~l~~l~~~~~~ 138 (342)
T 2z72_A 70 IKKVVALSDVHGQY---DVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQ------V--NEVLWFMYQLDQQARD 138 (342)
T ss_dssp CCEEEEECCCTTCH---HHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSC------H--HHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCH---HHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCC------H--HHHHHHHHHHHHHHhh
Confidence 56899999999543 334444332 36899999999953211 1 1122223222 1
Q ss_pred hcCCeEEcCCCceee
Q 012311 222 AYQPWIWSAGNHEIE 236 (466)
Q Consensus 222 ~~~P~~~~~GNHE~~ 236 (466)
...+++.+.||||..
T Consensus 139 ~~~~v~~v~GNHE~~ 153 (342)
T 2z72_A 139 AGGMVHLLMGNHEQM 153 (342)
T ss_dssp TTCEEEECCCHHHHH
T ss_pred CCCeEEEEecCCcHH
Confidence 234589999999974
|
| >2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=95.10 E-value=0.11 Score=49.98 Aligned_cols=87 Identities=15% Similarity=0.069 Sum_probs=54.5
Q ss_pred CCCceEEEeeecC----CCCcEEEEEEcCCCCC----CcEEEEe-ecCCCCceEEEeEEEEeeeeccccceEEEEEecCC
Q 012311 57 NSPQQVHITQGDY----DGKAVIISWVTPHEPG----PSTVSYG-TSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGL 127 (466)
Q Consensus 57 ~~P~qv~lt~~~~----~~~~~~V~W~t~~~~~----~~~V~yg-~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL 127 (466)
.+|..+.+..... ..+++.|+|..+...+ .-.|+|. ...+..+..+... ....+.++|.+|
T Consensus 204 ~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~~~~~----------~~~~~~~~l~~L 273 (313)
T 2d9q_B 204 EPPMLRTMDPSPEAAPPQAGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWALVGPL----------PLEALQYELCGL 273 (313)
T ss_dssp CCCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSSCCCCEEEEEE----------CSCEEEEEECSC
T ss_pred CcCceeEEEEecccccCCCCeEEEEECCCCCCCceeEEEEEEEccCCCCCCcEEcccc----------cCcceEEEEeCC
Confidence 4687776654311 2579999999864222 2467887 4444344333110 113456789999
Q ss_pred CCCCEEEEEecc------C---CccceEEEECCCC
Q 012311 128 EYDTKYYYKIGS------G---DSSREFWFQTPPK 153 (466)
Q Consensus 128 ~P~T~Y~Yrv~~------~---~~s~~~~F~T~p~ 153 (466)
+|+|.|..||.. + .||+...|+|+..
T Consensus 274 ~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~T~~~ 308 (313)
T 2d9q_B 274 LPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTER 308 (313)
T ss_dssp CSCCCEEEEEEEEECSSCCCCCCCCCCEEECCCC-
T ss_pred CCCCeEEEEEEeeECCCCCccCCCCCccceeCCcc
Confidence 999999999863 2 3677888999764
|
| >1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.07 E-value=0.057 Score=43.93 Aligned_cols=70 Identities=14% Similarity=0.173 Sum_probs=42.6
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCCC----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~~----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y 133 (466)
.|..+++... ..+++.|+|..+...+ .-.|+|.......... ... .......++|++|+|+|.|
T Consensus 20 ~P~~l~~~~~--~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~----~~~------~~~~~~~~~i~~L~p~t~Y 87 (119)
T 1wfn_A 20 PVGHLSFSEI--LDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRV----THY------LPNVTLEYRVTGLTALTTY 87 (119)
T ss_dssp CCSCCEEESC--CSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGGCC----CEE------ECSSCCEEEEESCCTTCEE
T ss_pred CCCceEEEEC--CCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCceE----EEE------eCCCceEEEEcCCCCCCEE
Confidence 4777766544 3579999998775332 2356666544221100 000 0122345789999999999
Q ss_pred EEEecc
Q 012311 134 YYKIGS 139 (466)
Q Consensus 134 ~Yrv~~ 139 (466)
.+||..
T Consensus 88 ~~~V~A 93 (119)
T 1wfn_A 88 TIEVAA 93 (119)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999965
|
| >2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A | Back alignment and structure |
|---|
Probab=95.02 E-value=0.048 Score=53.61 Aligned_cols=74 Identities=19% Similarity=0.376 Sum_probs=43.5
Q ss_pred CCCcEEEEEEcCCCCC----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEEEeccC-----
Q 012311 70 DGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGSG----- 140 (466)
Q Consensus 70 ~~~~~~V~W~t~~~~~----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Yrv~~~----- 140 (466)
..+++.|+|.-+...+ .-.|+|.......+... .. ..+....++|++|+|+|.|.+||..-
T Consensus 305 ~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~----~~------~~~~~~~~~i~~L~~~t~Y~~~V~A~n~~G~ 374 (389)
T 2jll_A 305 SGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLE----KK------VQGNKDHIILEHLQWTMGYEVQITAANRLGY 374 (389)
T ss_dssp TTTEEEEEECCCCCCSSCCCEEEEEEEC-----CCBC----CE------ECTTCCEEEECSCCTTCEEEEEEEEEC-CCB
T ss_pred cCCEEEEEEECCCCCCCcccEEEEEEEeCCCCcceeE----ee------ccCCcceEEeCCcCCCCEEEEEEEEEcCCcC
Confidence 3679999998654332 23566665332211100 00 01122356899999999999999652
Q ss_pred -CccceEEEECCCCC
Q 012311 141 -DSSREFWFQTPPKI 154 (466)
Q Consensus 141 -~~s~~~~F~T~p~~ 154 (466)
..|. ..|+|+|.|
T Consensus 375 s~~s~-~~~~T~~~P 388 (389)
T 2jll_A 375 SEPTV-YEFSMPPKP 388 (389)
T ss_dssp CCCEE-EEEECCCCC
T ss_pred CCcee-eEecCCCCC
Confidence 3444 489998875
|
| >2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B* | Back alignment and structure |
|---|
Probab=94.84 E-value=0.11 Score=47.59 Aligned_cols=86 Identities=15% Similarity=0.159 Sum_probs=55.6
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC------CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG------PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYD 130 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~------~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~ 130 (466)
.+|..+++...+ .++..|+|..+.... .-.|+|....+. +..+. ... .....+.+.|.+|+||
T Consensus 107 ~pP~~l~~~~~~--~~~l~lsW~~p~~~~~~~~~l~Yevry~~~~~~-w~~~~--~~~------~~~~~~~~~l~~L~p~ 175 (214)
T 2b5i_B 107 MAPISLQVVHVE--THRCNISWEISQASHYFERHLEFEARTLSPGHT-WEEAP--LLT------LKQKQEWICLETLTPD 175 (214)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSCCGGGTTCEEEEEEEECTTSC-STTSC--CEE------ECSCCCEEEECSCCTT
T ss_pred CCCceEEEEEec--CCeEEEEECCCCccccCCCceEEEEEEecCCCC-hheee--eee------ecccceEEEeccCCCC
Confidence 568888888654 368999999875321 246777765431 11110 001 0112346788999999
Q ss_pred CEEEEEecc----------CCccceEEEECCCC
Q 012311 131 TKYYYKIGS----------GDSSREFWFQTPPK 153 (466)
Q Consensus 131 T~Y~Yrv~~----------~~~s~~~~F~T~p~ 153 (466)
|.|..||.. +.||....|+|.|.
T Consensus 176 t~Y~vqVRa~~~~~~~G~WS~WS~~~~~~T~~~ 208 (214)
T 2b5i_B 176 TQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKPA 208 (214)
T ss_dssp CEEEEEEEEEESCCSSCCCCCCCCCEEEECCC-
T ss_pred CEEEEEEEEeeCCCCCCCccCCCCCEEEEcCCC
Confidence 999999963 15788889999885
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=94.82 E-value=0.12 Score=46.35 Aligned_cols=70 Identities=11% Similarity=0.273 Sum_probs=42.2
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~ 132 (466)
.+|..+.+... ..+++.|+|..+...+ .-.|+|....+...... .. ......++|++|+|+|.
T Consensus 111 ~~P~~~~~~~~--~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~-----~~------~~~~~~~~i~~L~p~t~ 177 (209)
T 2vkw_A 111 SAPKLEGQMGE--DGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWKPEI-----RL------PSGSDHVMLKSLDWNAE 177 (209)
T ss_dssp CCCEEEEEECT--TSSCEEEEEECCCCTTSCCCEEEEEEEETTSCCCCCE-----EE------CTTCCEEEECSCCTTCE
T ss_pred CCCcccccccc--cCCeEEEEEECcccCCCCCceEEEEEECCCCCCceee-----ec------CCCccEEEecCCCCCCE
Confidence 45776655433 3579999999874222 23677776222111111 00 11123468999999999
Q ss_pred EEEEecc
Q 012311 133 YYYKIGS 139 (466)
Q Consensus 133 Y~Yrv~~ 139 (466)
|.+||..
T Consensus 178 Y~~~V~A 184 (209)
T 2vkw_A 178 YEVYVVA 184 (209)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999965
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=94.81 E-value=0.22 Score=46.54 Aligned_cols=99 Identities=13% Similarity=0.118 Sum_probs=58.1
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCC-CCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYY 135 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~-~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Y 135 (466)
.+|..+.+.... .+++.|+|..+... ..-.|+|....+....... .. ...+-...++|++|+|+|.|.+
T Consensus 106 ~~P~~l~~~~~~--~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~-----~~---~~~~~~~~~~i~~L~p~t~Y~~ 175 (283)
T 1tdq_A 106 DAPKNLRVGSRT--ATSLDLEWDNSEAEAQEYKVVYSTLAGEQYHEVL-----VP---KGIGPTTKTTLTDLVPGTEYGV 175 (283)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSSCCSEEEEEEEETTCCCCEEEE-----EE---CCSSSEEEEEECSCCTTCEEEE
T ss_pred CCCCceEEEecC--CCeEEEEecCCCCCccEEEEEEEeCCCCcceEEE-----CC---CCCcccceEEEecCCCCCEEEE
Confidence 468888776543 57999999987422 2446777766543221111 00 0011155678999999999999
Q ss_pred EeccC---Ccc--ceEEEECCCCCCCCCCeEEEEEcc
Q 012311 136 KIGSG---DSS--REFWFQTPPKIDPDASYKFGIIGD 167 (466)
Q Consensus 136 rv~~~---~~s--~~~~F~T~p~~g~~~~~~f~v~GD 167 (466)
+|..- +.| ....+.|.|.+ ...+++..+++
T Consensus 176 ~V~A~n~~g~s~~~~~~~~t~~~~--P~~l~~~~~~~ 210 (283)
T 1tdq_A 176 GISAVMNSKQSIPATMNARTELDS--PRDLMVTASSE 210 (283)
T ss_dssp EEEEEETTEECCCEEEEEECCCCC--CEEEEEEEECS
T ss_pred EEEEEeCCCCCcceEEEecCCCCC--CCccEEeEecC
Confidence 99752 122 23466666542 23455544443
|
| >1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=94.78 E-value=0.026 Score=55.70 Aligned_cols=65 Identities=25% Similarity=0.235 Sum_probs=39.0
Q ss_pred EEEEEccCCCCCCcHHHHHHHHHh----CCCEEEEcccccccccccccccchhHHHHHHHHHHHhh--cCCeEEcCCCce
Q 012311 161 KFGIIGDLGQTYNSLSTLEHYMES----GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAA--YQPWIWSAGNHE 234 (466)
Q Consensus 161 ~f~v~GD~g~~~~~~~tl~~~~~~----~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~--~~P~~~~~GNHE 234 (466)
++.++||.|... ..+..+.+. ..+-++++||++.. |.. . -+-...+..+.. .-.++.+.||||
T Consensus 58 ~i~viGDIHG~~---~~L~~ll~~~g~~~~~~~vflGD~VDR-G~~-----s--~evl~lL~~lk~~~p~~v~~lrGNHE 126 (330)
T 1fjm_A 58 PLKICGDIHGQY---YDLLRLFEYGGFPPESNYLFLGDYVDR-GKQ-----S--LETICLLLAYKIKYPENFFLLRGNHE 126 (330)
T ss_dssp SEEEECBCTTCH---HHHHHHHHHHCSTTSSCEEECSCCSSS-SSC-----H--HHHHHHHHHHHHHSTTTEEECCCTTS
T ss_pred ceEEecCCCCCH---HHHHHHHHHhCCCCcceEEeCCCcCCC-CCC-----h--HHHHHHHHHhhhhcCCceEEecCCch
Confidence 589999999654 334444332 45779999999953 221 1 112333333221 234899999999
Q ss_pred ee
Q 012311 235 IE 236 (466)
Q Consensus 235 ~~ 236 (466)
..
T Consensus 127 ~~ 128 (330)
T 1fjm_A 127 CA 128 (330)
T ss_dssp SH
T ss_pred Hh
Confidence 64
|
| >2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.74 E-value=0.098 Score=42.71 Aligned_cols=67 Identities=19% Similarity=0.460 Sum_probs=42.9
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCCC----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~~----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y 133 (466)
+|..+++... . +++.|+|.-+...+ .-.|+|..... ..... .. ......++|++|+|+|.|
T Consensus 20 ~P~~l~~~~~--~-~sv~l~W~~P~~~ng~i~gY~i~y~~~~~-~~~~~-----~~------~~~~~~~~l~~L~p~t~Y 84 (116)
T 2edb_A 20 QPSSLHVRPQ--T-NCIIMSWTPPLNPNIVVRGYIIGYGVGSP-YAETV-----RV------DSKQRYYSIERLESSSHY 84 (116)
T ss_dssp CCSCEEEEEC--S-SCEEEEECCCSCTTBCCCEEEEEEEESST-TSEEE-----EE------ETTCCEEEECSCCSSSBE
T ss_pred CCCCeEEEEC--C-CEEEEEEcCCCCCCCceeEEEEEEEeCCC-CeEEE-----Ee------CCCeeEEEeCCCCCCCEE
Confidence 6888887755 2 79999998775432 23677765322 11111 10 112235789999999999
Q ss_pred EEEecc
Q 012311 134 YYKIGS 139 (466)
Q Consensus 134 ~Yrv~~ 139 (466)
.+||..
T Consensus 85 ~~~V~A 90 (116)
T 2edb_A 85 VISLKA 90 (116)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999965
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A | Back alignment and structure |
|---|
Probab=94.72 E-value=0.082 Score=49.84 Aligned_cols=79 Identities=19% Similarity=0.229 Sum_probs=48.3
Q ss_pred ceEEEeeecCCCCcEEEEEEcC--C----CCCCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEE
Q 012311 60 QQVHITQGDYDGKAVIISWVTP--H----EPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (466)
Q Consensus 60 ~qv~lt~~~~~~~~~~V~W~t~--~----~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y 133 (466)
.++.+... ..+++.|+|.-. . ....-.|+|....+.. ... .. ......++|+||+|||.|
T Consensus 201 p~~~~~~~--~~~sv~l~W~~~~~~~~~g~i~~Y~v~~~~~~~~~-~~~-----~~------~~~~~~~~~~~L~p~t~Y 266 (290)
T 3l5i_A 201 PTVRTKKV--GKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNE-TAV-----NV------DSSHTEYTLSSLTSDTLY 266 (290)
T ss_dssp CCEEEEEE--CSSCEEEEECCCCHHHHSSCCCEEEEEEEETTSCC-EEE-----EE------ETTCSEEEECSCCTTCEE
T ss_pred CeeeEeec--cCCEEEEEEcCCChhccCCEEEEEEEEEEeCCCCe-EEE-----Ee------CCCceEEEeCCCCCCCEE
Confidence 35655433 357999999832 1 1123457777654421 111 11 112235789999999999
Q ss_pred EEEeccC-----CccceEEEECCC
Q 012311 134 YYKIGSG-----DSSREFWFQTPP 152 (466)
Q Consensus 134 ~Yrv~~~-----~~s~~~~F~T~p 152 (466)
.+||..- ..|....|+|+|
T Consensus 267 ~~~V~A~n~~Gg~~s~~~~~~T~~ 290 (290)
T 3l5i_A 267 MVRMAAYTDEGGKDGPEFTFTTPK 290 (290)
T ss_dssp EEEEEEEETTEEEECCCEEEECCC
T ss_pred EEEEEEEeCCCCCCCCceEeecCC
Confidence 9999542 367788999975
|
| >1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.70 E-value=0.12 Score=42.29 Aligned_cols=80 Identities=18% Similarity=0.240 Sum_probs=50.0
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCC--CCCC----cEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPH--EPGP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYD 130 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~--~~~~----~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~ 130 (466)
..|+.|.+.. . .+++.|+|.-+. .... -.|.|............ ... +.+++. |+|+
T Consensus 20 ~~P~~v~~~~-~--~~si~l~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~~-----------~~~--~~~~~~-L~~~ 82 (117)
T 1wj3_A 20 QPPGNVVWNA-T--DTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQVLN-----------TNK--TSAELV-LPIK 82 (117)
T ss_dssp CCCCSCBCCE-E--TTEEEEECCCCCCCSSSCCEEEEEEEEEESSCSSCEEEE-----------ESS--SEEEEE-CCCS
T ss_pred CCCccEEEEE-e--CCEEEEEEcCCCccccCCceeEEEEEEEECCCCCCeEEe-----------CCC--cEEEEE-CCCC
Confidence 3577777655 2 468999998773 2221 35667665543221111 011 245677 9999
Q ss_pred CEEEEEecc------CCccceEEEECCCC
Q 012311 131 TKYYYKIGS------GDSSREFWFQTPPK 153 (466)
Q Consensus 131 T~Y~Yrv~~------~~~s~~~~F~T~p~ 153 (466)
|.|.+||.. +..|+...|+|...
T Consensus 83 t~Y~~~V~A~n~~G~Gp~S~~v~~~T~~~ 111 (117)
T 1wj3_A 83 EDYIIEVKATTDGGDGTSSEQIRIPRITS 111 (117)
T ss_dssp SCEEEEEEEEESSCCCCBCCCEEECCCCC
T ss_pred CEEEEEEEEECCCccCCCCCCEEEEcCCC
Confidence 999999954 35677888999764
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=94.70 E-value=0.12 Score=50.77 Aligned_cols=100 Identities=14% Similarity=0.171 Sum_probs=56.2
Q ss_pred CCCceEEEeeecCCCC-cEEEEEEcCCC--CCCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEE
Q 012311 57 NSPQQVHITQGDYDGK-AVIISWVTPHE--PGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~-~~~V~W~t~~~--~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y 133 (466)
.+|..+.+.... .+ ++.|+|.-+.. ...-.|+|....+........ .. ......++|++|+|+|.|
T Consensus 4 ~~P~~l~~~~~~--~~~sv~l~W~~~~~~~~~~Y~v~~~~~~~~~~~~~~~---~~------~~~~~~~~i~~L~p~t~Y 72 (375)
T 3t1w_A 4 SPPTNLHLEANP--DTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEE---VV------HADQSSCTFDNLSPGLEY 72 (375)
T ss_dssp CCCEEEEEEEET--TTTEEEEEEECCSCSSCCEEEEEEEETTCTTSCCEEE---EE------ETTCCEEEECCCCTTCCE
T ss_pred CCCCccEEEecC--CCeEEEEEEeCCCCCCeeeEEEEEEECCCCCCcceeE---Ec------CCCccEEEEcCCcCCCEE
Confidence 468888887653 46 89999997742 223468887755422111110 00 112235789999999999
Q ss_pred EEEeccC---CccceEEEECCCCCCCCCCeEEEEEcc
Q 012311 134 YYKIGSG---DSSREFWFQTPPKIDPDASYKFGIIGD 167 (466)
Q Consensus 134 ~Yrv~~~---~~s~~~~F~T~p~~g~~~~~~f~v~GD 167 (466)
.++|..- +.|....+++.+...+...+++..+++
T Consensus 73 ~~~V~a~~~~g~s~~~~~~~~~~~p~p~~l~~~~~~~ 109 (375)
T 3t1w_A 73 NVSVYTVKDDKESVPISDTIIPEVPQLTDLSFVDITD 109 (375)
T ss_dssp EEEEEEEETTEECCCEEEEECCCCCCCSCCEEECCCS
T ss_pred EEEEEEEcCCCCCCcEEeeEcCCCCCCceEEEEecCC
Confidence 9999652 234444444433221123455443333
|
| >1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.68 E-value=0.14 Score=42.49 Aligned_cols=68 Identities=15% Similarity=0.341 Sum_probs=43.2
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~ 132 (466)
.+|..+++.... +++.|+|.-+...+ .-.|+|.... ..... .. .......++|++|+|+|.
T Consensus 29 ~~P~~l~~~~~~---~sv~l~W~~P~~~~g~i~~Y~v~y~~~~-~~~~~-----~~------~~~~~~~~~i~~L~p~t~ 93 (126)
T 1x5i_A 29 EVPSSLHVRPLV---TSIVVSWTPPENQNIVVRGYAIGYGIGS-PHAQT-----IK------VDYKQRYYTIENLDPSSH 93 (126)
T ss_dssp CSCSEEEEEEET---TEEEEEEECCSCTTBCCCEEEEEECSSC-GGGEE-----EE------CCTTCCEEEECSCCSSCE
T ss_pred CCCCeeEEEecC---CEEEEEEcCCCCCCCCEeEEEEEEEcCC-CCceE-----EE------eCCCeeEEEEeCCCCCCE
Confidence 368888887652 79999999875332 2356666321 11110 01 112234578999999999
Q ss_pred EEEEecc
Q 012311 133 YYYKIGS 139 (466)
Q Consensus 133 Y~Yrv~~ 139 (466)
|.+||..
T Consensus 94 Y~~~V~A 100 (126)
T 1x5i_A 94 YVITLKA 100 (126)
T ss_dssp ECCEEEE
T ss_pred EEEEEEE
Confidence 9999965
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.62 E-value=0.17 Score=44.28 Aligned_cols=69 Identities=17% Similarity=0.321 Sum_probs=45.0
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC-----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG-----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~-----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T 131 (466)
..|..+.+.... .+++.|+|..+.... .-.|+|....+..+...... ....++|++|+|+|
T Consensus 104 ~~p~~~~~~~~~--~~~v~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~------------~~~~~~~~~L~p~t 169 (197)
T 3lpw_A 104 LPPGKITLMDVT--RNSVSLSWEKPEHDGGSRILGYIVEMQTKGSDKWATCATV------------KVTEATITGLIQGE 169 (197)
T ss_dssp CCCSCEEEEEEC--SSCEEEEECCCSCCTTSCCCEEEEEEEETTCSCCEEEEEE------------SSSEEEECCCCTTC
T ss_pred CCCcccEEEecc--CCeEEEEecCCCcCCCCcccEEEEEEEeCCCCceEEeecc------------cccEEEeCCcCCCC
Confidence 468888776543 579999999764322 23677776554333222110 11236899999999
Q ss_pred EEEEEecc
Q 012311 132 KYYYKIGS 139 (466)
Q Consensus 132 ~Y~Yrv~~ 139 (466)
.|.++|..
T Consensus 170 ~Y~~~V~A 177 (197)
T 3lpw_A 170 EYSFRVSA 177 (197)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999975
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=94.60 E-value=0.1 Score=51.02 Aligned_cols=73 Identities=12% Similarity=0.197 Sum_probs=45.5
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCC--CCCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHE--PGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYY 134 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~--~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~ 134 (466)
.+|..+.+..... .+++.|+|..+.. ...-.|+|....+........ .. ......++|++|+|+|.|.
T Consensus 3 ~~P~~l~~~~~~~-~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~~---~~------~~~~~~~~i~~L~p~t~Y~ 72 (368)
T 1fnf_A 3 SPPTNLHLEANPD-TGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEE---VV------HADQSSCTFDNLSPGLEYN 72 (368)
T ss_dssp CCCEEEEEEECSS-SSCEEEEEECCSCSSCCEEEEEEEETTTCSSCCEEE---EE------CTTCCEEECCCCCTTSCEE
T ss_pred CCCcceEEEecCC-CcEEEEEEeCCCCCCceEEEEEEEECCCCCCceeEE---Ee------cCCcCEEEECCCCCCCEEE
Confidence 4688888875432 2369999998642 223477787655432111110 01 1122457899999999999
Q ss_pred EEecc
Q 012311 135 YKIGS 139 (466)
Q Consensus 135 Yrv~~ 139 (466)
|||..
T Consensus 73 ~~V~a 77 (368)
T 1fnf_A 73 VSVYT 77 (368)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99975
|
| >2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.59 E-value=0.1 Score=46.53 Aligned_cols=71 Identities=18% Similarity=0.228 Sum_probs=44.1
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCC--CCCCcEEEEeecCCC-CceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPH--EPGPSTVSYGTSADK-FDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYY 134 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~--~~~~~~V~yg~~~~~-~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~ 134 (466)
.|.++.++.-....+++.|+|..+. ....-.|+|...... .+... .. .+-...++|+||+|+|.|.
T Consensus 2 ~P~~l~v~~v~~~~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~-----~~------~~~~~~~~i~~L~p~t~Y~ 70 (201)
T 2ha1_A 2 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKEA-----TI------PGHLNSYTIKGLKPGVVYE 70 (201)
T ss_dssp CCCEEECCSCSCCSSCEEEEEECCSSTTCCEEEEEEEETTCSSCCEEE-----EE------CTTCCEEEECSCCTTEEEE
T ss_pred CceeEEEEecCCCCCEEEEEEeCCCCCCceEEEEEEEECCCCCceEEE-----ec------CCCccEEEecCCCCCCEEE
Confidence 4777776643222689999999873 122346778765432 11211 11 1112357899999999999
Q ss_pred EEecc
Q 012311 135 YKIGS 139 (466)
Q Consensus 135 Yrv~~ 139 (466)
+||..
T Consensus 71 ~~V~a 75 (201)
T 2ha1_A 71 GQLIS 75 (201)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99975
|
| >3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A | Back alignment and structure |
|---|
Probab=94.52 E-value=0.04 Score=53.93 Aligned_cols=67 Identities=18% Similarity=0.176 Sum_probs=39.0
Q ss_pred CeEEEEEccCCCCCCcHHHHHHHHHh-----CCCEEEEcccccccccccccccchhHHHHHHHHHHHhh--cCCeEEcCC
Q 012311 159 SYKFGIIGDLGQTYNSLSTLEHYMES-----GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAA--YQPWIWSAG 231 (466)
Q Consensus 159 ~~~f~v~GD~g~~~~~~~tl~~~~~~-----~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~--~~P~~~~~G 231 (466)
..+++++||.|... ..+.++.+. ..+.++++||++...... -+-...+..+.. .-.++.+.|
T Consensus 59 ~~ri~viGDIHG~~---~~L~~ll~~~g~~~~~~~~vflGD~VDRG~~s--------~evl~lL~~lk~~~p~~v~~lrG 127 (315)
T 3h63_A 59 TEKITVCGDTHGQF---YDLLNIFELNGLPSETNPYIFNGDFVDRGSFS--------VEVILTLFGFKLLYPDHFHLLRG 127 (315)
T ss_dssp TCEEEEECCCTTCH---HHHHHHHHHHCCCBTTBCEEEESCCSSSSTTH--------HHHHHHHHHHHHHSTTTEEEECC
T ss_pred CceEEEEecCCCCH---HHHHHHHHHhCCCCCCCEEEEeCCccCCCcCh--------HHHHHHHHHhhhhcCCcEEEEec
Confidence 34899999999753 333333332 234699999999532211 112223332222 234888999
Q ss_pred Cceee
Q 012311 232 NHEIE 236 (466)
Q Consensus 232 NHE~~ 236 (466)
|||..
T Consensus 128 NHE~~ 132 (315)
T 3h63_A 128 NHETD 132 (315)
T ss_dssp TTSSH
T ss_pred Ccccc
Confidence 99964
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=94.51 E-value=0.049 Score=50.03 Aligned_cols=90 Identities=20% Similarity=0.340 Sum_probs=52.8
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~ 132 (466)
..|..+++.... .+++.|+|.-+...+ .-.|+|....+..... +...... ........++|+||+|+|.
T Consensus 100 ~~P~~l~~~~~~--~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~i~~L~p~t~ 172 (234)
T 3f7q_A 100 SEPGRLAFNVVS--STVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPI--GPMKKVL---VDNPKNRMLLIENLRESQP 172 (234)
T ss_dssp CCCCCCEEEECS--SSCEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBS--SCCEECC---CSCTTCCEEEEECCCTTCC
T ss_pred CCCCccEEEEec--CCEEEEEEcCCCCCCCceeEEEEEEEECCCCCCcc--CcceEEE---ecCCcceEEEeCCCCCCCe
Confidence 357777776543 578999998764322 2367777654432110 1111111 0111223578999999999
Q ss_pred EEEEecc------CCccc-eEEEECCCC
Q 012311 133 YYYKIGS------GDSSR-EFWFQTPPK 153 (466)
Q Consensus 133 Y~Yrv~~------~~~s~-~~~F~T~p~ 153 (466)
|.+||.. +..|. ...|+|.|.
T Consensus 173 Y~~~V~A~n~~G~g~~S~~~~~~~T~~~ 200 (234)
T 3f7q_A 173 YRYTVKARNGAGWGPEREAIINLATQPK 200 (234)
T ss_dssp EEEEEEEEETTEECCCEEEEECGGGSCC
T ss_pred EEEEEEEECCCccCCCcCceeEeecCCC
Confidence 9999964 23454 467888764
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=94.42 E-value=0.16 Score=45.49 Aligned_cols=79 Identities=20% Similarity=0.328 Sum_probs=43.4
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCCCC----cEEEEeecCC-CCceEEEeEEEEeee--eccccceEEEEEecCCCCC
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEPGP----STVSYGTSAD-KFDFTAEGTVNNYTF--YKYKSGYIHQCLVDGLEYD 130 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~~~----~~V~yg~~~~-~~~~~a~g~~~~y~~--~~~~~~~~h~v~l~gL~P~ 130 (466)
+|..+++.... .+++.|+|.-+...+. -.|+|...+. ..+...... ..+.. .+........++|++|+|+
T Consensus 4 pP~~~~~~~~~--~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~-~~~~~~~~~~~~~~~~~~~i~~L~p~ 80 (214)
T 2ibg_A 4 PPTPPNVTRLS--DESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDN-IPYGKPKWNSELGKSFTASVTDLKPQ 80 (214)
T ss_dssp CCCCCEEEEEE--TTEEEEEEEEECCSSCCEEEEEEEEEESSSSCCCEECSCC-EECCSSSCSSSSEEEEEEEECSCCTT
T ss_pred CCCCCEeeEec--CCEEEEEEECCCCCCCCceEEEEEEEECCCCCcCcccccc-cCccccccccccCcceeEEecCCcCC
Confidence 35555554432 5799999987754332 3566666432 222221110 11000 0001123456789999999
Q ss_pred CEEEEEecc
Q 012311 131 TKYYYKIGS 139 (466)
Q Consensus 131 T~Y~Yrv~~ 139 (466)
|.|.|||..
T Consensus 81 t~Y~~~V~A 89 (214)
T 2ibg_A 81 HTYRFRILA 89 (214)
T ss_dssp CEEEEEEEE
T ss_pred CEEEEEEEE
Confidence 999999864
|
| >3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* | Back alignment and structure |
|---|
Probab=94.39 E-value=0.037 Score=53.76 Aligned_cols=65 Identities=23% Similarity=0.249 Sum_probs=38.5
Q ss_pred EEEEEccCCCCCCcHHHHHHHHHh----CCCEEEEcccccccccccccccchhHHHHHHHHHHHhh--cCCeEEcCCCce
Q 012311 161 KFGIIGDLGQTYNSLSTLEHYMES----GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAA--YQPWIWSAGNHE 234 (466)
Q Consensus 161 ~f~v~GD~g~~~~~~~tl~~~~~~----~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~--~~P~~~~~GNHE 234 (466)
+++++||.|... ..+.++.+. ..+-++++||++.....+ -+-...+..+.. .-.++.+.||||
T Consensus 57 ~i~viGDIHG~~---~~L~~ll~~~g~~~~~~~vfLGD~VDrG~~s--------~evl~lL~~lk~~~p~~v~~lrGNHE 125 (299)
T 3e7a_A 57 PLKICGDIHGQY---YDLLRLFEYGGFPPESNYLFLGDYVDRGKQS--------LETICLLLAYKIKYPENFFLLRGNHE 125 (299)
T ss_dssp SEEEECBCTTCH---HHHHHHHHHHCSTTSSCEEECSCCSSSSSCH--------HHHHHHHHHHHHHSTTTEEECCCTTS
T ss_pred CEEEEecCCCCH---HHHHHHHHHhCCCCCccEEeCCcccCCCCCc--------HHHHHHHHHHHhhCCCcEEEEecCch
Confidence 589999999754 333333332 457789999999532211 111222322221 234899999999
Q ss_pred ee
Q 012311 235 IE 236 (466)
Q Consensus 235 ~~ 236 (466)
..
T Consensus 126 ~~ 127 (299)
T 3e7a_A 126 CA 127 (299)
T ss_dssp SH
T ss_pred hh
Confidence 64
|
| >1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A | Back alignment and structure |
|---|
Probab=94.29 E-value=0.27 Score=45.04 Aligned_cols=84 Identities=17% Similarity=0.295 Sum_probs=53.4
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC-----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG-----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~-----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T 131 (466)
.+|..|++...+ ...++.|+|..+.... .-.|+|....+..+.... .. ..-...+.|.+|+|||
T Consensus 123 ~pP~~l~~~~~~-~~~~l~v~W~~P~~~~~~~~l~Yev~y~~~~~~~w~~~~---~~-------~~~~~~~~l~~L~p~t 191 (227)
T 1eer_B 123 DAPVGLVARLAD-ESGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQRV---EI-------LEGRTECVLSNLRGRT 191 (227)
T ss_dssp CCCEEEEEEECS-STTCEEEEEECCSSCSCGGGEEEEEEEECCSSSCCCCEE---EE-------CTTCCEEEECCCCSSC
T ss_pred CcCcceEEEEcC-CCCeEEEEEcCCCCcccccceEEEEEEEcCCCCCcEEEE---EE-------ecCceEEEEcccCCCC
Confidence 578888888643 2478999999875321 236777765443222100 00 0012357889999999
Q ss_pred EEEEEecc-----------CCccceEEEECC
Q 012311 132 KYYYKIGS-----------GDSSREFWFQTP 151 (466)
Q Consensus 132 ~Y~Yrv~~-----------~~~s~~~~F~T~ 151 (466)
.|..||.. +.||....|+|+
T Consensus 192 ~Y~vqVRa~~~~~~~~g~wS~WS~~~~~~t~ 222 (227)
T 1eer_B 192 RYTFAVRARMAEPSFGGFWSEWSEPVSLLTP 222 (227)
T ss_dssp EEEEEEEEEECTTTCCEECCCCCCCEEEEC-
T ss_pred eEEEEEEEeECCCCCCCcCCCCCCCEEEECc
Confidence 99999853 246778889994
|
| >3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=94.28 E-value=0.059 Score=53.15 Aligned_cols=67 Identities=18% Similarity=0.259 Sum_probs=39.3
Q ss_pred CeEEEEEccCCCCCCcHHHHHHHHHh---C-C-CEEEEcccccccccccccccchhHHHHHHHHHHHhhc--CCeEEcCC
Q 012311 159 SYKFGIIGDLGQTYNSLSTLEHYMES---G-A-QTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAY--QPWIWSAG 231 (466)
Q Consensus 159 ~~~f~v~GD~g~~~~~~~tl~~~~~~---~-~-dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~--~P~~~~~G 231 (466)
..+++++||.|.... .+.++.+. . . +.+|++||++...... -+-...+..+... -.++.+.|
T Consensus 63 ~~ri~viGDIHG~~~---~L~~ll~~~g~~~~~~~~vflGD~VDRG~~s--------~evl~lL~~lk~~~p~~v~llrG 131 (335)
T 3icf_A 63 DVKISVCGDTHGQFY---DVLNLFRKFGKVGPKHTYLFNGDFVDRGSWS--------CEVALLFYCLKILHPNNFFLNRG 131 (335)
T ss_dssp TCEEEEECCCTTCHH---HHHHHHHHHCCCBTTEEEEECSCCSSSSTTH--------HHHHHHHHHHHHHCTTTEEECCC
T ss_pred CceEEEEecCCCCHH---HHHHHHHHcCCCCCCcEEEEeCCccCCCcCh--------HHHHHHHHHHhhhCCCcEEEecC
Confidence 468999999987543 33333332 2 2 4599999999532211 1122233332222 34889999
Q ss_pred Cceee
Q 012311 232 NHEIE 236 (466)
Q Consensus 232 NHE~~ 236 (466)
|||..
T Consensus 132 NHE~~ 136 (335)
T 3icf_A 132 NHESD 136 (335)
T ss_dssp TTSSH
T ss_pred chhhh
Confidence 99964
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=94.20 E-value=0.2 Score=44.86 Aligned_cols=69 Identities=16% Similarity=0.212 Sum_probs=44.4
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCC--CCCcEEEEeecCCCC-ceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHE--PGPSTVSYGTSADKF-DFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYY 134 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~--~~~~~V~yg~~~~~~-~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~ 134 (466)
.|..+.+.... .+++.|+|.-+.. ...-.|+|....+.. .... .. ......++|+||+|+|.|.
T Consensus 116 ~P~~l~~~~~~--~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~-----~~------~~~~~~~~i~~L~p~t~Y~ 182 (203)
T 2gee_A 116 PPTDLRFTNIG--PDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVAEL-----SI------SPSDNAVVLTNLLPGTEYV 182 (203)
T ss_dssp CCEEEEEEEEE--TTEEEEEEECCSSCCCSEEEEEEEETTCGGGCEEE-----EE------CTTCCEEEECSCCTTCEEE
T ss_pred CCCceEEEEcC--CCEEEEEEcCCCCCCccEEEEEEEECCCCCccEEE-----Ec------CCCcCEEEECCCCCCCEEE
Confidence 58888776543 4799999998742 123467787644321 1111 10 1123457899999999999
Q ss_pred EEecc
Q 012311 135 YKIGS 139 (466)
Q Consensus 135 Yrv~~ 139 (466)
++|..
T Consensus 183 ~~V~A 187 (203)
T 2gee_A 183 VSVSS 187 (203)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99975
|
| >1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A | Back alignment and structure |
|---|
Probab=94.18 E-value=0.083 Score=49.14 Aligned_cols=83 Identities=16% Similarity=0.245 Sum_probs=51.9
Q ss_pred CCCceEEEeeecCCC----CcEEEEEEcCCCCC--------CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEe
Q 012311 57 NSPQQVHITQGDYDG----KAVIISWVTPHEPG--------PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLV 124 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~----~~~~V~W~t~~~~~--------~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l 124 (466)
.+|..+++++..... ..+.|+|..+.... .-.|+|....+..+.... ......+.|
T Consensus 132 ~pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~~~~~g~~~l~Yevry~~~~~~~w~~~~------------~~~~~~~~l 199 (236)
T 1axi_B 132 DPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMMD------------PILTTSVPV 199 (236)
T ss_dssp CCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSSCEECC------------CBSSSEEEE
T ss_pred CCCcccEEEEEecccCCCCceEEEEECCCCCccccCCceeeEEEEEEEECCCCceEEEe------------ccCCCEEEE
Confidence 568888665543222 34999999875321 235677766543332211 011235788
Q ss_pred cCCCCCCEEEEEecc--------CCccceEEEECC
Q 012311 125 DGLEYDTKYYYKIGS--------GDSSREFWFQTP 151 (466)
Q Consensus 125 ~gL~P~T~Y~Yrv~~--------~~~s~~~~F~T~ 151 (466)
.+|+|||+|..||.. +.||+...|+|+
T Consensus 200 ~~L~p~t~Y~vqVRa~~~~gg~ws~WS~~~~~~~p 234 (236)
T 1axi_B 200 YSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP 234 (236)
T ss_dssp EEEETTSCEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred eccCCCCEEEEEEEEEECCCCCcCCCCCCEEEECC
Confidence 999999999999964 146777788775
|
| >1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.17 E-value=0.18 Score=39.64 Aligned_cols=83 Identities=19% Similarity=0.230 Sum_probs=51.9
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCC--CCcEEEEeecCCC-CceEEEeEEEEeeeeccccceEEEEEecCCCCCCEE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEP--GPSTVSYGTSADK-FDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~--~~~~V~yg~~~~~-~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y 133 (466)
.-|-|+.++-.....++-.|.|..+... ..-.+.|...... .++.+. -.+....-+|+||+||..|
T Consensus 6 ~gpa~v~is~~~s~pdsh~iqW~~~s~s~I~eyiL~~R~k~~~g~Wke~~-----------Ip~h~nSYtI~GL~P~~~Y 74 (98)
T 1oww_A 6 SGPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKEAT-----------IPGHLNSYTIKGLKPGVVY 74 (98)
T ss_dssp CCCCEEECCCCSSCTTCEEEEEECCSSSCEEEEEEEEEETTCSSCCEEEE-----------ECSSCCEEEECSCCSSEEE
T ss_pred CcceEEEecCCCCCCCccceEEecCCCCCceEEEEEEEEcCCCCceeEEE-----------ecCccceEEEecCCCCcEE
Confidence 3477777765544478899999987532 2335556655442 233321 1223344589999999999
Q ss_pred EEEeccC---Cccc--eEEEEC
Q 012311 134 YYKIGSG---DSSR--EFWFQT 150 (466)
Q Consensus 134 ~Yrv~~~---~~s~--~~~F~T 150 (466)
.=+|-+- ++++ .+.|.|
T Consensus 75 E~qv~S~~ryG~~Evs~f~FtT 96 (98)
T 1oww_A 75 EGQLISIQQYGHQEVTRFDFTT 96 (98)
T ss_dssp EEEEEEEESSSCEEEEEEEEEE
T ss_pred EEEEEEeeccCcccceEEEEEe
Confidence 9998663 4444 566766
|
| >3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A | Back alignment and structure |
|---|
Probab=94.05 E-value=0.046 Score=54.27 Aligned_cols=65 Identities=20% Similarity=0.235 Sum_probs=38.6
Q ss_pred EEEEEccCCCCCCcHHHHHHHHHh----CCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcC--CeEEcCCCce
Q 012311 161 KFGIIGDLGQTYNSLSTLEHYMES----GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQ--PWIWSAGNHE 234 (466)
Q Consensus 161 ~f~v~GD~g~~~~~~~tl~~~~~~----~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~--P~~~~~GNHE 234 (466)
+++++||.|.... .+.++.+. ..+-++++||++..... + -+-...+..+.... .++.+.||||
T Consensus 71 pi~ViGDIHG~~~---dL~~ll~~~g~~~~~~~vfLGD~VDRG~~-s-------~Evl~lL~~lk~~~p~~v~llrGNHE 139 (357)
T 3ll8_A 71 PVTVCGDIHGQFF---DLMKLFEVGGSPANTRYLFLGDYVDRGYF-S-------IECVLYLWALKILYPKTLFLLRGNHE 139 (357)
T ss_dssp SEEEECCCTTCHH---HHHHHHHHHCCTTTCCEEECSCCSSSSTT-H-------HHHHHHHHHHHHHCTTTEEECCCTTS
T ss_pred cceeeccCCCCHH---HHHHHHHhcCCCCCcEEEECCCccCCCcC-h-------HHHHHHHHHhhhhcCCcEEEEeCchh
Confidence 4899999997643 33333332 55789999999953211 1 11122332232222 4889999999
Q ss_pred ee
Q 012311 235 IE 236 (466)
Q Consensus 235 ~~ 236 (466)
..
T Consensus 140 ~~ 141 (357)
T 3ll8_A 140 CR 141 (357)
T ss_dssp SH
T ss_pred hh
Confidence 64
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=93.95 E-value=0.24 Score=44.08 Aligned_cols=83 Identities=14% Similarity=0.068 Sum_probs=50.1
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCC--CCC----CcEEEEeecCCCC-ceEEEeEEEEeeeeccccceEEEEEecCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPH--EPG----PSTVSYGTSADKF-DFTAEGTVNNYTFYKYKSGYIHQCLVDGLEY 129 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~--~~~----~~~V~yg~~~~~~-~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P 129 (466)
..|..+.+... ..+++.|+|..+. ..+ .-.|+|....... +.... . .......++|++|+|
T Consensus 106 ~~P~~~~~~~~--~~~sv~l~W~~p~~~~~ng~i~~Y~v~~~~~~~~~~~~~~~----~------~~~~~~~~~i~~L~p 173 (205)
T 1cfb_A 106 KNPDNVVGQGT--EPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNN----I------FDWRQNNIVIADQPT 173 (205)
T ss_dssp CCCSCCEEECS--STTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEEEE----E------CCTTCCEEEECSCCS
T ss_pred CCCeeeEeecC--CCCeEEEEEECCCccccCCCceEEEEEEEECCCCCCcEEEE----e------cCCCccEEEEcCCCC
Confidence 35777776654 3579999998764 111 2367777655432 21111 0 011224568999999
Q ss_pred CCEEEEEeccC------C-ccceEEEECC
Q 012311 130 DTKYYYKIGSG------D-SSREFWFQTP 151 (466)
Q Consensus 130 ~T~Y~Yrv~~~------~-~s~~~~F~T~ 151 (466)
+|.|.+||..- . +|+...++|.
T Consensus 174 ~t~Y~~~V~A~n~~G~g~~ss~~v~~~T~ 202 (205)
T 1cfb_A 174 FVKYLIKVVAINDRGESNVAAEEVVGYSG 202 (205)
T ss_dssp SCEEEEEEEEEETTEECSSCCCCEEEESS
T ss_pred CcEEEEEEEEEcCCCcCCCCCCcEEEecC
Confidence 99999999652 2 3455566664
|
| >1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A | Back alignment and structure |
|---|
Probab=93.94 E-value=0.35 Score=46.71 Aligned_cols=83 Identities=16% Similarity=0.210 Sum_probs=52.9
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCC--C----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEP--G----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYD 130 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~--~----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~ 130 (466)
.+|..+.+.......+++.|+|..+... + .-.|+|.......+..+.- ......++|.+|+|+
T Consensus 198 ~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~~~~~W~~~~~-----------~~~~~~~~l~~L~p~ 266 (325)
T 1n26_A 198 DPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWMV-----------KDLQHHCVIHDAWSG 266 (325)
T ss_dssp CCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEEEEC-----------GGGCSEEEESSCCTT
T ss_pred CCCcceEEEEecCCCCEEEEEECCCCccCCCcEeEEEEEEEEeCCCCCCEEEcc-----------cCCceEEEEeCCCCC
Confidence 4688888876543346999999987531 1 2357887765444433211 011235789999999
Q ss_pred CEEEEEecc------C---CccceEEEEC
Q 012311 131 TKYYYKIGS------G---DSSREFWFQT 150 (466)
Q Consensus 131 T~Y~Yrv~~------~---~~s~~~~F~T 150 (466)
|.|..||.. + .||+...++|
T Consensus 267 t~Y~~rVrA~n~~g~G~~S~wS~~~~~~~ 295 (325)
T 1n26_A 267 LRHVVQLRAQEEFGQGEWSEWSPEAMGTP 295 (325)
T ss_dssp CCEEEEEEEEETTTBSCCCCCCCCEEECC
T ss_pred CeEEEEEEEecCCCCCCCcCCCCccceec
Confidence 999999964 2 3556555555
|
| >2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens} | Back alignment and structure |
|---|
Probab=93.70 E-value=0.39 Score=44.10 Aligned_cols=79 Identities=19% Similarity=0.264 Sum_probs=48.6
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCCCcEEEEeecCCC-CceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADK-FDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYY 135 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~~~~V~yg~~~~~-~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Y 135 (466)
.+|..++.+-- ..+++.++|..+... ...-.|..-.+. .-.++.+..++ .+++||+|+|.|-|
T Consensus 152 ~Pp~NL~At~V--T~tSVtLsW~aP~~~-~GI~gY~ly~~g~~v~~v~~~~ts-------------yt~~gLk~~TeYsF 215 (238)
T 2w1n_A 152 NPVRDFKASEI--NKKNVTVTWTEPETT-EGLEGYILYKDGKKVAEIGKDETS-------------YTFKKLNRHTIYNF 215 (238)
T ss_dssp CCCEEEEEEEE--CSSCEEEEEECCSCC-TTEEEEEEEETTEEEEEEETTCCE-------------EEECSCCTTCEEEE
T ss_pred CCCCceEEEEc--cCCeEEEEecCCCCC-CCceeEEEEeCCceeEEeeccceE-------------EEecCCCCCCEEEE
Confidence 46888877754 368999999998532 334455443322 11122222122 37899999999999
Q ss_pred Eecc----C--CccceEEEECC
Q 012311 136 KIGS----G--DSSREFWFQTP 151 (466)
Q Consensus 136 rv~~----~--~~s~~~~F~T~ 151 (466)
||.. | ..++...+||.
T Consensus 216 ~V~A~d~~G~~Ss~e~vtVrTl 237 (238)
T 2w1n_A 216 KIAAKYSNGEVSSKESLTLRTA 237 (238)
T ss_dssp EEEEEETTSCBCCCEEEEEECC
T ss_pred EEEEEeCCCCccccCcEEEEec
Confidence 9964 2 23355677774
|
| >2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.68 E-value=0.027 Score=45.20 Aligned_cols=70 Identities=14% Similarity=0.253 Sum_probs=44.5
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCC-CCcEEEEeecCCCC-ceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKF-DFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYY 134 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~-~~~~V~yg~~~~~~-~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~ 134 (466)
.+|..+++..-. .+++.|+|.-+... ..-.|+|....+.. .... . ..+....++|+||+|+|.|.
T Consensus 9 ~~P~~l~v~~~t--~~si~lsW~~p~g~i~~Y~v~y~~~~~~~~~~~~-----~------v~~~~~~~~l~~L~p~t~Y~ 75 (105)
T 2ekj_A 9 SPPSNLALASET--PDSLQVSWTPPLGRVLHYWLTYAPASGLGPEKSV-----S------VPGARSHVTLPDLQAATKYR 75 (105)
T ss_dssp CCCEEEEEEEEE--TTEEEEEEECCSSCCSBBCBBCCCTTSCSCCCCB-----C------CBTTSSEEEECSCCSSCCCB
T ss_pred CCCCceEEEeCC--CCEEEEEEeCCCCcceEEEEEEEECCCCCccEEE-----E------eCCCcCEEEeCCCCCCCEEE
Confidence 468888887543 57999999987422 23456676544321 1000 0 01122457899999999999
Q ss_pred EEecc
Q 012311 135 YKIGS 139 (466)
Q Consensus 135 Yrv~~ 139 (466)
++|..
T Consensus 76 ~~V~A 80 (105)
T 2ekj_A 76 VLVSA 80 (105)
T ss_dssp CBBCB
T ss_pred EEEEE
Confidence 99975
|
| >1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=93.68 E-value=0.056 Score=56.08 Aligned_cols=65 Identities=22% Similarity=0.273 Sum_probs=38.3
Q ss_pred EEEEEccCCCCCCcHHHHHHHHHh----CCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCC--eEEcCCCce
Q 012311 161 KFGIIGDLGQTYNSLSTLEHYMES----GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQP--WIWSAGNHE 234 (466)
Q Consensus 161 ~f~v~GD~g~~~~~~~tl~~~~~~----~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P--~~~~~GNHE 234 (466)
+++++||.|.... .|.++.+. ..+-+|++||++..... + -+-...+..+....| ++.+.||||
T Consensus 84 pI~VIGDIHGq~~---dL~~LL~~~g~p~~d~yVFLGDyVDRGp~-S-------~Evl~lL~aLk~~~P~~v~lLRGNHE 152 (521)
T 1aui_A 84 PVTVCGDIHGQFF---DLMKLFEVGGSPANTRYLFLGDYVDRGYF-S-------IECVLYLWALKILYPKTLFLLRGNHE 152 (521)
T ss_dssp SEEEECCCTTCHH---HHHHHHHHHCCTTTCCEEECSCCSSSSSC-H-------HHHHHHHHHHHHHSTTTEEECCCTTS
T ss_pred ceeeccCCCCCHH---HHHHHHHhcCCCCcceEEEcCCcCCCCCC-H-------HHHHHHHHHHhhhCCCeEEEecCCcc
Confidence 5899999996543 33333322 45789999999943211 1 112222332222234 889999999
Q ss_pred ee
Q 012311 235 IE 236 (466)
Q Consensus 235 ~~ 236 (466)
..
T Consensus 153 ~~ 154 (521)
T 1aui_A 153 CR 154 (521)
T ss_dssp SH
T ss_pred HH
Confidence 64
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=93.65 E-value=0.08 Score=54.65 Aligned_cols=67 Identities=18% Similarity=0.152 Sum_probs=39.3
Q ss_pred CeEEEEEccCCCCCCcHHHHHHHHHh-----CCCEEEEcccccccccccccccchhHHHHHHHHHHH--hhcCCeEEcCC
Q 012311 159 SYKFGIIGDLGQTYNSLSTLEHYMES-----GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERS--AAYQPWIWSAG 231 (466)
Q Consensus 159 ~~~f~v~GD~g~~~~~~~tl~~~~~~-----~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l--~~~~P~~~~~G 231 (466)
..+++++||.|... ..+..+.+. ..+.+|++||++..... + .+-...+..+ .....++.+.|
T Consensus 212 ~~~~~vigDiHG~~---~~l~~~l~~~~~~~~~~~~v~lGD~vdrG~~-s-------~e~~~~l~~l~~~~~~~~~~lrG 280 (477)
T 1wao_1 212 TEKITVCGDTHGQF---YDLLNIFELNGLPSETNPYIFNGDFVDRGSF-S-------VEVILTLFGFKLLYPDHFHLLRG 280 (477)
T ss_dssp SCEEEEECBCTTCH---HHHHHHHHHHCCCBTTBCEEEESCCSSSSTT-H-------HHHHHHHHHHHHHSTTTEEEECC
T ss_pred CcceEEEeCCCCCH---HHHHHHHHHcCCCCCcCeEEEeccccCCCcc-h-------HHHHHHHHHHHhhCCCceEeecC
Confidence 45899999999643 334444332 23569999999943211 1 1112222222 12346899999
Q ss_pred Cceee
Q 012311 232 NHEIE 236 (466)
Q Consensus 232 NHE~~ 236 (466)
|||..
T Consensus 281 NHE~~ 285 (477)
T 1wao_1 281 NHETD 285 (477)
T ss_dssp TTSSH
T ss_pred CccHH
Confidence 99954
|
| >2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A | Back alignment and structure |
|---|
Probab=93.55 E-value=0.045 Score=43.65 Aligned_cols=58 Identities=16% Similarity=0.250 Sum_probs=38.2
Q ss_pred CCCCcEEEEEEcCCCC-CCcEEEEeecCCCCc---eEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEEEecc
Q 012311 69 YDGKAVIISWVTPHEP-GPSTVSYGTSADKFD---FTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGS 139 (466)
Q Consensus 69 ~~~~~~~V~W~t~~~~-~~~~V~yg~~~~~~~---~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Yrv~~ 139 (466)
...+++.|+|..+... ..-.|+|....+... ..+.| -.-.+.|+||+|||+|.-.|..
T Consensus 17 vt~~S~~lsW~~p~~~v~~Y~I~y~~~~g~~~~~~~~v~g-------------~~~s~~l~~L~PgT~Y~V~v~a 78 (95)
T 2h41_A 17 ITASSFVVSWVSASDTVSGFRVEYELSEEGDEPQYLDLPS-------------TATSVNIPDLLPGRKYIVNVYQ 78 (95)
T ss_dssp CGGGCEEEECCCSCTTEEEEEEEEEETTTCCCCEEEEEET-------------TCCEEEECSCCTTCEEEEEEEE
T ss_pred eCCCeEEEEECCCCCCccEEEEEEEeCCCCCcceEEECCC-------------CccEEEECCCCCCCEEEEEEEE
Confidence 3467899999876432 245678887654211 12222 2234799999999999988864
|
| >1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.69 E-value=0.58 Score=50.42 Aligned_cols=93 Identities=16% Similarity=0.289 Sum_probs=51.7
Q ss_pred CCCCceEEEeeecCCCC---cEEEEEEcCCCCCC----cEEEEeec-CCCCceEEEeEEEEeeeeccccceEEEEEecCC
Q 012311 56 HNSPQQVHITQGDYDGK---AVIISWVTPHEPGP----STVSYGTS-ADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGL 127 (466)
Q Consensus 56 ~~~P~qv~lt~~~~~~~---~~~V~W~t~~~~~~----~~V~yg~~-~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL 127 (466)
..+|..+.++......+ ++.|+|.-+..... -.|+|... ....... ........ ..+-...++|+||
T Consensus 267 p~~P~~l~~~~~~~~~~g~~sv~l~W~pP~~~~g~i~~Y~V~~~~~~~~~~~~~-~~~~~~~~----v~~~~~~~~l~~L 341 (680)
T 1zlg_A 267 PPAPANLRLANSTVNSDGSVTVTIVWDLPEEPDIPVHHYKVFWSWMVSSKSLVP-TKKKRRKT----TDGFQNSVILEKL 341 (680)
T ss_pred CCCCCceEeeeeeecCCCceEEEEEecCCCCCCCceeEEEEEEEecccccccCC-ccceEEEE----EcCCeeEEEeCCC
Confidence 35688888764411245 99999997643322 35666622 1100000 00000000 1223456899999
Q ss_pred CCCCEEEEEeccC------Cccce---EEEECCCC
Q 012311 128 EYDTKYYYKIGSG------DSSRE---FWFQTPPK 153 (466)
Q Consensus 128 ~P~T~Y~Yrv~~~------~~s~~---~~F~T~p~ 153 (466)
+|+|.|.+||..- ..|.. ..|+|.+.
T Consensus 342 ~p~t~Y~~~V~A~n~~G~g~~S~~~~~v~~~T~~~ 376 (680)
T 1zlg_A 342 QPDCDYVVELQAITYWGQTRLKSAKVSLHFTSTHA 376 (680)
T ss_pred CCCCEEEEEEEEEECCCcCCCCCCceeEEEECCCC
Confidence 9999999999642 23443 77888764
|
| >3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.41 E-value=1.5 Score=41.98 Aligned_cols=77 Identities=21% Similarity=0.271 Sum_probs=47.5
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCCC-----------CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecC
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEPG-----------PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDG 126 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~~-----------~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~g 126 (466)
+|. |.+...+ +++.|+|. +.... .-.|.|+..++.......+ -...++|.+
T Consensus 104 pP~-v~~~~~~---~si~v~w~-P~~~~~~~~~~~g~~l~Y~v~y~~~~~~~~~~~~~-------------~~~~~~l~~ 165 (306)
T 3s98_A 104 PPE-VHLEAED---KAIVIHIS-PGTKDSVMWALDGLSFTYSLVIWKNSSGVEERIEN-------------IYSRHKIYK 165 (306)
T ss_dssp CCE-EEEEECS---SCEEEEEE-CC---CCCC-----CCEEEEEEEETTTCCCEEEEE-------------ECTEEEECS
T ss_pred CCe-EEEEEcC---CEEEEEEE-CCCCCCcceeccCCcEEEEEEEEECCCCCeEEEec-------------ccceEEEcc
Confidence 454 7776543 58999999 43211 1256666655433222111 113578999
Q ss_pred CCCCCEEEEEecc--------CCccceEEEECCC
Q 012311 127 LEYDTKYYYKIGS--------GDSSREFWFQTPP 152 (466)
Q Consensus 127 L~P~T~Y~Yrv~~--------~~~s~~~~F~T~p 152 (466)
|+|+|.|..+|.. +..|+...++|..
T Consensus 166 L~p~t~Y~~~V~A~~~~~~g~g~~S~~~~~~T~~ 199 (306)
T 3s98_A 166 LSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTV 199 (306)
T ss_dssp CCTTCEEEEEEEEEEGGGTEECCCCCCEEEECCS
T ss_pred CCCCCeEEEEEEEEEccCCCCCCCCCcEeeEecC
Confidence 9999999999853 2457777888854
|
| >2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=92.32 E-value=0.2 Score=52.07 Aligned_cols=88 Identities=16% Similarity=0.179 Sum_probs=55.6
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCCC----cEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPGP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~~----~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~ 132 (466)
.+|..+++... ..+++.|+|..+...+. -.|+|....+..+.. . .... ......+.+.|.+|+|+|+
T Consensus 388 ~PP~nl~v~~~--s~~sl~LsW~pP~~~~g~~l~YeV~Yr~~~~~~w~~-~---~~~~---~~~~~~~~v~l~~L~P~T~ 458 (488)
T 2q7n_A 388 HDPTSLKVKDI--NSTVVTFSWYLPGNFTKINLLCQIEICKANSKKEVR-N---ATIR---GAEDSTYHVAVDKLNPYTA 458 (488)
T ss_dssp CCCEEEEEEEC--STTCEEEEEEEEEECSSSEEEEEEEEBCTTSCCEEE-E---EEEE---CCEEEEEEEEECSCCSSCC
T ss_pred CCCeEEEEEec--CCCEEEEEEeCCCCCCCcceEEEEEEEECCCCCceE-E---EEEe---cCCCcEEEEEeCCCCCCce
Confidence 46888887653 35799999998743322 356777654422211 0 0110 0012356679999999999
Q ss_pred EEEEecc-----C---CccceEEEECCCC
Q 012311 133 YYYKIGS-----G---DSSREFWFQTPPK 153 (466)
Q Consensus 133 Y~Yrv~~-----~---~~s~~~~F~T~p~ 153 (466)
|..||.. | .||+...|+|++.
T Consensus 459 Y~~rVRA~~~g~G~WS~WS~~v~~~T~e~ 487 (488)
T 2q7n_A 459 YTFRVRCSSKTFWKWSRWSDEKRHLTTEA 487 (488)
T ss_dssp BBCCEEEEESSCSSCCCCCCCCCBCCCCC
T ss_pred EEEEEEEEECCCCCCCCCcCCEeEECCCC
Confidence 9999853 2 5677788999764
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=92.21 E-value=0.55 Score=45.60 Aligned_cols=71 Identities=15% Similarity=0.335 Sum_probs=44.5
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCC-CCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYY 135 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~-~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Y 135 (466)
.+|..+.+.... .+++.|+|..+..+ ..-.|+|....+..... .... .+-...++|+||+|||.|.+
T Consensus 277 ~~P~~l~~~~~~--~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~----~~~~------~~~~~~~~~~~L~p~t~Y~~ 344 (368)
T 1fnf_A 277 DVPRDLEVVAAT--PTSLLISWDAPAVTVRYYRITYGETGGNSPVQ----EFTV------PGSKSTATISGLKPGVDYTI 344 (368)
T ss_dssp CSCEEEEEEEEE--TTEEEEEEECCSSCCSEEEEEEEETTCCSCCE----EEEE------ETTCCEEEECSCCTTCCEEE
T ss_pred CCCCeeEEEecC--CCEEEEEeeCCCCccceEEEEEEECCCCCccE----EEEc------CCCeeEEEecCCCCCCEEEE
Confidence 457777776543 47999999887533 23467777654321110 0011 11223578999999999999
Q ss_pred Eecc
Q 012311 136 KIGS 139 (466)
Q Consensus 136 rv~~ 139 (466)
+|..
T Consensus 345 ~V~A 348 (368)
T 1fnf_A 345 TVYA 348 (368)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
|
| >3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor, sugarbridge, fibronectine domain, signaling, cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.15 E-value=0.4 Score=43.86 Aligned_cols=86 Identities=20% Similarity=0.186 Sum_probs=54.0
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCC---------CCcEEEEeecCCCCceEE-EeEEEEeeeeccccceEEEEEecC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEP---------GPSTVSYGTSADKFDFTA-EGTVNNYTFYKYKSGYIHQCLVDG 126 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~---------~~~~V~yg~~~~~~~~~a-~g~~~~y~~~~~~~~~~h~v~l~g 126 (466)
.+|..+.+.. ...+.|+|..+... -.-.|+|....+ .+..+ .+... ........+.+.+
T Consensus 102 ~PP~nltv~~----~~~l~lsW~~P~~~p~~~~~~~~L~Yevryr~~~~-~W~~~~~~~~~------~~~~~~~~~~~~~ 170 (219)
T 3tgx_A 102 APPFDVTVTF----SGQYQISWRSDYEDPAFYMLKGKLQYELQYRNRGD-PWAVSPRRKLI------SVDSRSVSLLPLE 170 (219)
T ss_dssp CCCEEEEEEE----SSSEEEEEECGGGSGGGGGGTTSEEEEEEEEETTS-CTTSCCEEEEE------CSSCSEEEECTTS
T ss_pred CCCCceEEEe----CCCEEEEEeCCcCCccccccccCEEEEEEEecCCC-CceecccceeE------ecCCCEEEEEecc
Confidence 5688777762 35899999987431 123577877653 22111 11110 0122345567889
Q ss_pred CCCCCEEEEEecc---------C---CccceEEEECCCC
Q 012311 127 LEYDTKYYYKIGS---------G---DSSREFWFQTPPK 153 (466)
Q Consensus 127 L~P~T~Y~Yrv~~---------~---~~s~~~~F~T~p~ 153 (466)
|+|||.|..||.. | .||+...|+|++.
T Consensus 171 L~p~t~Y~vqVRa~~~~g~~~~G~WSeWS~~~~~~T~~~ 209 (219)
T 3tgx_A 171 FRKDSSYELQVRAGPMPGSSYQGTWSEWSDPVIFQTQSE 209 (219)
T ss_dssp SCSSCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCC-
T ss_pred CCCCCEEEEEEEEeeCCCCCCCCcCcCCCCCeEEECCch
Confidence 9999999999942 2 4688899999875
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=91.98 E-value=0.62 Score=49.25 Aligned_cols=69 Identities=22% Similarity=0.303 Sum_probs=47.7
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCC-CC----cEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEP-GP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~-~~----~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T 131 (466)
.+|....++-.. .++++++|..+... ++ -.||+...++..|..+. ++ . .+ .++++||.||+
T Consensus 11 ~pP~~P~v~~~~--~~sv~L~W~~P~~DGgs~I~~Y~vE~~~~~~~~W~~v~-~~-~-----~t-----~~~V~~L~~g~ 76 (573)
T 3uto_A 11 EPPRFPIIENIL--DEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPCA-KS-R-----YT-----YTTIEGLRAGK 76 (573)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSCCSSSCCCEEEEEEEESSSCCCEEEE-EE-S-----SS-----EEEECCCCTTC
T ss_pred ccCCCCEEEEee--CCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEec-cc-c-----CC-----EEEeCCCCCCC
Confidence 346666665443 57999999987422 22 46788888877776663 21 1 01 25789999999
Q ss_pred EEEEEecc
Q 012311 132 KYYYKIGS 139 (466)
Q Consensus 132 ~Y~Yrv~~ 139 (466)
.|.+||..
T Consensus 77 ~Y~FRV~A 84 (573)
T 3uto_A 77 QYEFRIIA 84 (573)
T ss_dssp EEEEEEEE
T ss_pred cEeEEEEE
Confidence 99999965
|
| >3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.75 E-value=0.2 Score=52.44 Aligned_cols=89 Identities=18% Similarity=0.194 Sum_probs=55.3
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~ 132 (466)
.+|..+.+...+...+++.|+|..+...+ .-.|+|....+..+..+.-. ........++|++|+|+|.
T Consensus 200 ~pP~~~~~~~~~~~~~~v~l~W~~p~~~~~~~~~Y~v~~~~~~~~~w~~~~~~--------~~~~~~~~~~i~~L~p~t~ 271 (589)
T 3l5h_A 200 NPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE--------DTASTRSSFTVQDLKPFTE 271 (589)
T ss_dssp CCCCSCEEECTTTCTTCEEEECCCCGGGGTSCEEEEEEEEETTCSCCBCCCTT--------SSCSCCSEEEECSCCSSCC
T ss_pred CCCceEEEEecCCCCCeEEEEeCCCCCCCeeeEEEEEEECCCCCCCcEEEccc--------cCcCceeEEEECCCCCCCE
Confidence 46888887643344689999998764322 23577776654333221100 0112234578999999999
Q ss_pred EEEEecc------C---CccceEEEECCCC
Q 012311 133 YYYKIGS------G---DSSREFWFQTPPK 153 (466)
Q Consensus 133 Y~Yrv~~------~---~~s~~~~F~T~p~ 153 (466)
|.+||.. + .||+...|+|++.
T Consensus 272 Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~~ 301 (589)
T 3l5h_A 272 YVFRIRCMKEDGKGYWSDWSEEASGITYED 301 (589)
T ss_dssp EEEEEEEEESSSCSCCCCCCCCBCCCCCCC
T ss_pred EEEEEEEEeCCCCCccCCCCCccccccCcc
Confidence 9999964 2 2467777888764
|
| >3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.72 E-value=1.4 Score=45.22 Aligned_cols=142 Identities=11% Similarity=0.044 Sum_probs=77.4
Q ss_pred CCeEEEEEccCCCCCCcHH---HHHH----HH-----------HhCCCEEEEccccccccccccc--------------c
Q 012311 158 ASYKFGIIGDLGQTYNSLS---TLEH----YM-----------ESGAQTVLFLGDLSYADRYQFI--------------D 205 (466)
Q Consensus 158 ~~~~f~v~GD~g~~~~~~~---tl~~----~~-----------~~~~dfvl~~GDl~Y~~~~~~~--------------d 205 (466)
.+..++.++|++.+..... .++. +. ..+...+|.+||.+...+.... +
T Consensus 199 ~~~~ialVSGL~igs~~~~~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e~~~~~~y~~~~~~~~ 278 (476)
T 3e0j_A 199 TDRFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYLTKKTQAA 278 (476)
T ss_dssp SCCEEEEECCCCBTSSCHHHHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-------------CHHHHHHH
T ss_pred CCCEEEEECCcccCCCcccchHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccchhhhhhhccccccchh
Confidence 4678999999998875321 1211 11 1267889999999965321100 0
Q ss_pred cchhHHHHHHHHHHHhhcCCeEEcCCCceeeccCcCCcccccccccccccCCCC-CCCCCCCceEEEeeCCEEEEEEcCC
Q 012311 206 VGVRWDSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHL-ASKSSSPLWYAIRRASAHIIVLSSY 284 (466)
Q Consensus 206 ~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~~-~~~~~~~~yYsf~~g~v~fI~Lds~ 284 (466)
.......+.+++..+...+|+.+.|||||-.... . -+.++.. ..|..... .+-..-..-|.|++++++|++....
T Consensus 279 ~~~~~~~ld~~L~~l~~~i~V~lmPG~~DP~~~~-l-PQqplh~--~lfp~s~~~~~~~~vtNP~~~~i~G~~~LgtsGq 354 (476)
T 3e0j_A 279 SVEAVKMLDEILLQLSASVPVDVMPGEFDPTNYT-L-PQQPLHP--CMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 354 (476)
T ss_dssp HHHHHHHHHHHHHHHHTTSCEEEECCTTSSSCSS-S-SCCCCCT--TSCHHHHTSTTEEECCSSEEEEETTEEEEECSSH
T ss_pred hHHHHHHHHHHHHhcccCceEEecCCCCCccccc-C-CCCCcCH--HHhhhhhhcCccEEeCCCeEEEECCEEEEEECCC
Confidence 0123455666777788899999999999975321 0 1111110 01100000 0000011236699999999887653
Q ss_pred C-----CCCCChHHHHHHHHHHhh
Q 012311 285 S-----PFVKYTPQWEWLREELKK 303 (466)
Q Consensus 285 ~-----~~~~~~~Q~~WL~~~L~~ 303 (466)
. .+.....-++.+++.|+.
T Consensus 355 nidDi~ky~~~~~~l~~me~~Lkw 378 (476)
T 3e0j_A 355 NVSDIFRYSSMEDHLEILEWTLRV 378 (476)
T ss_dssp HHHHHHHHSCCCCHHHHHHHHHHB
T ss_pred CHHHHHhcCCCCCHHHHHHHHHHH
Confidence 1 111233456788888875
|
| >2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A* | Back alignment and structure |
|---|
Probab=91.61 E-value=0.17 Score=54.01 Aligned_cols=96 Identities=23% Similarity=0.408 Sum_probs=51.8
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCCCcEEEEeecCCC-CceEEEeEE------EEee--eecccc------ceEEE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADK-FDFTAEGTV------NNYT--FYKYKS------GYIHQ 121 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~~~~V~yg~~~~~-~~~~a~g~~------~~y~--~~~~~~------~~~h~ 121 (466)
.+|+.+.+--...+.++++|.|..++. ......|..-.+. .-.++.... ..|. |+.... -..|+
T Consensus 36 ~~p~~~~~~t~~~~~~si~l~~~~p~~-~~~~~~y~vy~ng~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (608)
T 2uvf_A 36 DAPQQLQVPTLAYDESSIVLVWKAPED-TRKIVDYQIFSAGKLLGKASDNNDNFSPAKPYIDHFYVNDKDNFQHKIVMQN 114 (608)
T ss_dssp CCCEEEECCTTCBCSSCEEEEEECCSC-CTTEEEEEEEETTEEEEEHHHHHHHHCSSHHHHHHHHHTCGGGCSCCCCCCE
T ss_pred CCCCceEeeecccCCcEEEEEEeCCcc-ccccccEEEEECCEEeEeeccccccccccccccccccccccccccceeeeee
Confidence 358777763222346899999998854 3445555543221 111110000 0000 000000 12467
Q ss_pred EEecCCCCCCEEEEEecc----C---CccceEEEECCCC
Q 012311 122 CLVDGLEYDTKYYYKIGS----G---DSSREFWFQTPPK 153 (466)
Q Consensus 122 v~l~gL~P~T~Y~Yrv~~----~---~~s~~~~F~T~p~ 153 (466)
.++++|+|+|+|.|+|.. + ..++....+|.+.
T Consensus 115 ~~v~~L~p~T~Y~~~v~a~d~~G~~s~ds~~V~~~T~~~ 153 (608)
T 2uvf_A 115 FTVIGLKPETSYQFTVKAQYADGSLSVASKPITAKTSAK 153 (608)
T ss_dssp EEECSCCTTCEEEEEEEEEETTSCBCCCCCCEEEECCCC
T ss_pred EEecCCCCCCEEEEEEEEecCCCcccccchhcccccccC
Confidence 899999999999999965 2 2355667777664
|
| >2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A | Back alignment and structure |
|---|
Probab=91.58 E-value=1.8 Score=42.07 Aligned_cols=84 Identities=25% Similarity=0.312 Sum_probs=51.8
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCC-CCc----EEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEP-GPS----TVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~-~~~----~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T 131 (466)
..|..+.+.... .+++.|+|.-+... +.+ .|+|...+...+..+. ........+|.+|+|++
T Consensus 197 ~~P~~~~~~~~~--~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~l~~~~ 263 (389)
T 2jll_A 197 SSPYGVKIIELS--QTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIWKIVR-----------SHGVQTMVVLNNLEPNT 263 (389)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSCCTTSCEEEEEEEEEETTCSCCEEEE-----------CSTTCSEEEECSCCTTC
T ss_pred CCCcceEEeecc--CCEEEEEEeCCCCCCCcceEEEEEEEEECCCcccEEee-----------ccCCcceEEECCccCCC
Confidence 356666655443 57899999865322 222 4666665543332211 11122357899999999
Q ss_pred EEEEEecc------CCccceEEEECCCC
Q 012311 132 KYYYKIGS------GDSSREFWFQTPPK 153 (466)
Q Consensus 132 ~Y~Yrv~~------~~~s~~~~F~T~p~ 153 (466)
.|.|||.. +..|....|+|.|.
T Consensus 264 ~y~~~v~A~N~~G~~~~s~~~~~~t~~~ 291 (389)
T 2jll_A 264 TYEIRVAAVNGKGQGDYSKIEIFQTLPV 291 (389)
T ss_dssp EEEEEEEEEESSCBCCCCCCEEEECCCC
T ss_pred EEEEEEEEEcCCccCCCCcceEEEecCC
Confidence 99999954 23566778998764
|
| >3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.55 E-value=0.82 Score=41.00 Aligned_cols=79 Identities=16% Similarity=0.186 Sum_probs=49.6
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCC--------------CCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEP--------------GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCL 123 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~--------------~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~ 123 (466)
.| .|++... .+++.|+|..+..+ -.-.|.|+..++....... . ....++
T Consensus 96 PP-~v~~~~~---~~si~v~w~~P~~~~~~~~~~~~~~~~~l~Y~v~y~~~~~~~~~~~~------~-------~~~~~~ 158 (201)
T 3lqm_A 96 PP-GMQVEVL---ADCLHMRFLAPKIENEYETWTMKNVYNSWTYNVQYWKQGTDEKFQIT------P-------QYDFEV 158 (201)
T ss_dssp CC-EEEEEEE---TTEEEEEEECCEEECSSCEEEHHHHCTTCEEEEEEEETTCCCCEEEC------C-------SSSEEE
T ss_pred CC-EEEEEEe---CCEEEEEEcCCCccCCCcccCHHHhCCceEEEEEEEECCCCcEEEEE------e-------cCceEE
Confidence 35 5777544 36999999886411 1235566665433221111 0 012378
Q ss_pred ecCCCCCCEEEEEecc--------CCccceEEEECCCC
Q 012311 124 VDGLEYDTKYYYKIGS--------GDSSREFWFQTPPK 153 (466)
Q Consensus 124 l~gL~P~T~Y~Yrv~~--------~~~s~~~~F~T~p~ 153 (466)
|.+|+|+|.|..+|.. +.+|+..-|+|.+.
T Consensus 159 l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~~ 196 (201)
T 3lqm_A 159 LRNLEPWTTYCVQVRGFLPDRNKAGEWSEPVCEQTTHD 196 (201)
T ss_dssp ECSCCTTCEEEEEEEEEETTTTEECCCCCCEEEECCCG
T ss_pred EecCCCCCcEEEEEEEEeccCCCCCCcCCCEeEEeCCC
Confidence 9999999999999863 24677888888764
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=91.30 E-value=0.82 Score=44.55 Aligned_cols=83 Identities=14% Similarity=0.131 Sum_probs=50.0
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCC--CCCcEEEEeecCCCC-ceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHE--PGPSTVSYGTSADKF-DFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYY 134 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~--~~~~~V~yg~~~~~~-~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~ 134 (466)
+|..+.+... ..+++.|+|..+.. ...-.|+|....... .... .. ......++|++|+|+|.|.
T Consensus 189 ~p~~l~~~~~--~~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~-----~~------~~~~~~~~i~~L~p~t~Y~ 255 (375)
T 3t1w_A 189 PPTDLRFTNI--GPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVAEL-----SI------SPSDNAVVLTNLLPGTEYV 255 (375)
T ss_dssp CCEEEEEESC--CSSCEEEEEECCSSCCCCEEEEEEEEGGGTTCCEEE-----EE------CTTCCEEEECSCCTTCEEE
T ss_pred CCceeEEEec--ccCEEEEEEcCCCCCCccEEEEEEEeCCCCCCcEEE-----Ec------CCCcCEEEeCCCCCCCEEE
Confidence 5777776644 35799999998632 123467777654321 1111 10 1122457899999999999
Q ss_pred EEeccC-----CccceEEEECCCC
Q 012311 135 YKIGSG-----DSSREFWFQTPPK 153 (466)
Q Consensus 135 Yrv~~~-----~~s~~~~F~T~p~ 153 (466)
+||..- .......++|+|.
T Consensus 256 ~~V~A~~~~g~s~~~~~~~~t~p~ 279 (375)
T 3t1w_A 256 VSVSSVYEQHESTPLRGRQKTGLD 279 (375)
T ss_dssp EEEEEEETTEECCCEEEEEECCCC
T ss_pred EEEEEEcCCCcCCceeeEEecCCC
Confidence 999652 1222445677664
|
| >3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* | Back alignment and structure |
|---|
Probab=91.13 E-value=1.2 Score=46.74 Aligned_cols=94 Identities=15% Similarity=0.153 Sum_probs=52.1
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCCC-----cEEEEeecCCCCc-eEEEeEEEEeeeeccccceEEEEEecCCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPGP-----STVSYGTSADKFD-FTAEGTVNNYTFYKYKSGYIHQCLVDGLEYD 130 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~~-----~~V~yg~~~~~~~-~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~ 130 (466)
.+|..+.... ..+++.|+|.-+...+. -.|+|........ ....+....+... ........++|++|+|+
T Consensus 335 saP~nl~~~v---s~tSv~LsW~pP~~~gG~~i~~Y~V~~~~~~~~~~~~~~c~~~~~~~~~-~~~~~~ts~tI~gL~P~ 410 (536)
T 3fl7_A 335 SAPHYLTAVG---MGAKVELRWTPPQDSGGREDIVYSVTCEQCWPESGECGPCEASVRYSEP-PHGLTRTSVTVSDLEPH 410 (536)
T ss_dssp CCBSCEEEEC---CTTSEEEEECCBSCCCSCSCCEEEEEEEEECC-CCCEEECCTTCEESSC-SSSBCSSEEEEECCCTT
T ss_pred CcccceEEEe---cCCEEEEEEeCCcCCCCCceeEEEEEEEeccCCCCcccccCCCceEEEe-ecCCccceeEeCCCCCC
Confidence 4688885433 35799999987654332 2566665321100 0000111111100 01123346789999999
Q ss_pred CEEEEEeccC---------CccceEEEECCCCC
Q 012311 131 TKYYYKIGSG---------DSSREFWFQTPPKI 154 (466)
Q Consensus 131 T~Y~Yrv~~~---------~~s~~~~F~T~p~~ 154 (466)
|.|.+||..- ..+....++|+|.+
T Consensus 411 T~Y~frV~A~N~~G~~sps~~s~~v~v~T~~~~ 443 (536)
T 3fl7_A 411 MNYTFTVEARNGVSGLVTSRSFRTASVSINQTE 443 (536)
T ss_dssp CEEEEEEEEECTTGGGCSCCCEEEEEEECCSCC
T ss_pred CEEEEEEEEEecCCCCCCCCccceeEEeecccC
Confidence 9999999542 13456788887753
|
| >3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A* | Back alignment and structure |
|---|
Probab=90.67 E-value=1.8 Score=43.20 Aligned_cols=77 Identities=18% Similarity=0.225 Sum_probs=48.0
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCCC-----------CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecC
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEPG-----------PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDG 126 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~~-----------~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~g 126 (466)
.|. |.+... .+++.|+|. +.... .-.|.|+..++.......+ -...++|++
T Consensus 108 pP~-v~~~~~---~~si~v~w~-P~~~~g~~~~~~~~~~~Y~v~y~~~~~~~~~~~~~-------------~~~~~~i~~ 169 (414)
T 3se4_A 108 PPE-VHLEAE---DKAIVIHIS-PGTKDSVMWALDGLSFTYSLVIWKNSSGVEERIEN-------------IYSRHKIYK 169 (414)
T ss_dssp CCE-EEEEEC---SSCEEEEEE-CSSSSCTTTGGGGSSCEEEEEEEETTTCCEEEEEE-------------ECSEEEECC
T ss_pred CCe-EEEEEc---CCEEEEEEE-cCCCCCceeeeecCcEEEEEEEEECCCCceEEEec-------------CCcEEEEcC
Confidence 454 776654 258999999 64221 2357777766543222111 122478999
Q ss_pred CCCCCEEEEEeccC--------CccceEEEECCC
Q 012311 127 LEYDTKYYYKIGSG--------DSSREFWFQTPP 152 (466)
Q Consensus 127 L~P~T~Y~Yrv~~~--------~~s~~~~F~T~p 152 (466)
|+|+|.|..||..- ..|+...++|..
T Consensus 170 L~p~t~Y~~~V~A~n~~~~g~g~~S~~~~~~t~~ 203 (414)
T 3se4_A 170 LSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTV 203 (414)
T ss_dssp CCTTCEEEEEEEEECTTTCCEEEECCCEEEECCS
T ss_pred CCCCCeEEEEEEEEeccCCCCCccCccccccccc
Confidence 99999999998642 245566777764
|
| >3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A* | Back alignment and structure |
|---|
Probab=90.54 E-value=0.32 Score=49.65 Aligned_cols=71 Identities=14% Similarity=0.284 Sum_probs=45.0
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCC--CCCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHE--PGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYY 134 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~--~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~ 134 (466)
..|..+++.-.. .++++|+|..+.. .-.-.|+|......... ..+.. ..-...++|+||+|||+|.
T Consensus 371 ~~~~~l~~~~~~--~~s~~l~W~~p~~~~~~~y~v~y~~~~~~~~~----~~~~~------~~~~~~~~i~~L~p~t~Y~ 438 (461)
T 3csg_A 371 SVPTNLEVVAAT--PTSLLISWDASYSSSVSYYRITYGETGGNSPV----QEFTV------PGSKSTATISGLSPGVDYT 438 (461)
T ss_dssp CSSCCCEEEEEC--SSCEEEECCCTTGGGCSEEEEEEEETTCCSCC----EEEEE------ETTCCEEEECSCCTTCEEE
T ss_pred CCCcceEEeccC--CCeEEEEecCCCCCcceEEEEEEEECCCCccc----eEEEe------cCCCceEEecCCCCCCEEE
Confidence 457788887664 5799999987621 11346777776432100 01110 1122558999999999999
Q ss_pred EEecc
Q 012311 135 YKIGS 139 (466)
Q Consensus 135 Yrv~~ 139 (466)
.+|..
T Consensus 439 ~~v~a 443 (461)
T 3csg_A 439 ITVYA 443 (461)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99975
|
| >1iar_B Protein (interleukin-4 receptor alpha chain); cytokine receptor,interleukin-4, cytokine/receptor complex; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_B* 3bpn_B* 3bpo_B* | Back alignment and structure |
|---|
Probab=90.46 E-value=1.2 Score=40.24 Aligned_cols=87 Identities=13% Similarity=0.157 Sum_probs=46.8
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCC---C----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEP---G----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEY 129 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~---~----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P 129 (466)
.+|..++++... .....|+|..+... . .-.|+|....+.-. ...... ..........+.+|.|
T Consensus 99 ~PP~nl~~~~~~--~~~l~l~W~~p~~~~~~~~~~L~yev~y~~~~~~~~-~~~~~~-------~~~~~~~~~~~~~L~p 168 (207)
T 1iar_B 99 RAPGNLTVHTNV--SDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPAD-FRIYNV-------TYLEPSLRIAASTLKS 168 (207)
T ss_dssp CCCEEEEEC------CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSC-EEEEEE-------CSSCCEEEECC-----
T ss_pred CCCCCeEEEEcc--CCCEEEEECCCCCccccccccEEEEEEEccCCCchh-heeeee-------ecCCcEEEEEHHHCCC
Confidence 578888888543 35899999987421 1 23688877654321 111100 0123345566789999
Q ss_pred CCEEEEEecc------C---CccceEEEECCCC
Q 012311 130 DTKYYYKIGS------G---DSSREFWFQTPPK 153 (466)
Q Consensus 130 ~T~Y~Yrv~~------~---~~s~~~~F~T~p~ 153 (466)
|+.|.-||.. | .||....|+|.++
T Consensus 169 ~~~Y~vqVR~k~~~~~G~WSeWS~~~~~~t~~~ 201 (207)
T 1iar_B 169 GISYRARVRAWAQAYNTTWSEWSPSTKWHNSYR 201 (207)
T ss_dssp CCCEEEEEEEECGGGTCCCCCCCCCEEEC----
T ss_pred CCEEEEEEEEecCCCCCCCCCCCcCeEEECCCC
Confidence 9999999963 2 4778889999765
|
| >3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C* | Back alignment and structure |
|---|
Probab=90.02 E-value=1.5 Score=41.96 Aligned_cols=78 Identities=15% Similarity=0.157 Sum_probs=44.6
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCCC----cEEEEeecCCCCceEEEeE---EEEeeeeccccceEEEEEecCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPGP----STVSYGTSADKFDFTAEGT---VNNYTFYKYKSGYIHQCLVDGLEY 129 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~~----~~V~yg~~~~~~~~~a~g~---~~~y~~~~~~~~~~h~v~l~gL~P 129 (466)
.+|..+++... .+++.|+|..+..... -.|+|....+..+....-. +..... .........++|.+|+|
T Consensus 201 ~pP~~l~~~~~---~~~l~lsW~~P~~~~~~~l~Yev~y~~~~~~~w~~~~~~~~~c~~~~~-~~~~~~~~~~~l~~L~p 276 (314)
T 3bpo_C 201 DPPHIKNLSFH---NDDLYVQWENPQNFISRCLFYEVEVNNSQTETHNVFYVQEAKCENPEF-ERNVENTSCFMVPGVLP 276 (314)
T ss_dssp CCCEEEEEEEE---TTEEEEEEECCTTCCGGGEEEEEEEEC--CCCEEEEEESCCCCCCTTS-SCCCSSEEEEEEESCCT
T ss_pred CCCCEEEEEEc---CCcEEEEEeCCCccCCceEEEEEEEEECCCCcceEEeccccccccccc-ccccCCceEEEEccCCC
Confidence 46888888743 4699999998853222 3577776554332211100 000000 00012345678999999
Q ss_pred CCEEEEEec
Q 012311 130 DTKYYYKIG 138 (466)
Q Consensus 130 ~T~Y~Yrv~ 138 (466)
+|+|..||.
T Consensus 277 ~t~Y~~qVr 285 (314)
T 3bpo_C 277 DTLNTVRIR 285 (314)
T ss_dssp TSCEEEEEE
T ss_pred CCEEEEEEE
Confidence 999999985
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A | Back alignment and structure |
|---|
Probab=89.42 E-value=3.7 Score=38.05 Aligned_cols=72 Identities=14% Similarity=0.179 Sum_probs=42.9
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCC-CCCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEEE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHE-PGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~-~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Yr 136 (466)
.|..+++...+ +++.|+|.-+.. ...-.|+|........... ..... .......+.+++|+|+|.|.+|
T Consensus 104 p~~~~~~~~~~---~si~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~~L~p~t~Y~~~ 173 (290)
T 3l5i_A 104 PVMDLKAFPKD---NMLWVEWTTPRESVKKYILEWCVLSDKAPCIT--DWQQE-----DGTVHRTYLRGNLAESKCYLIT 173 (290)
T ss_dssp CCEEEEEEEET---TEEEEEEECCSSCCCEEEEEEEEECSSSCCCC--EEEEE-----ETTCSEEECCSCCCTTCEEEEE
T ss_pred ccceeEEEeCC---CeEEEEEeCCCCCCCcEEEEEEECCCCCCCCc--CeEEc-----cCCCcceEEecCcCCccEEEEE
Confidence 45566665542 599999998754 2345677876554321000 00000 1122345678999999999999
Q ss_pred ecc
Q 012311 137 IGS 139 (466)
Q Consensus 137 v~~ 139 (466)
|..
T Consensus 174 V~A 176 (290)
T 3l5i_A 174 VTP 176 (290)
T ss_dssp EEE
T ss_pred EEE
Confidence 964
|
| >2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C* | Back alignment and structure |
|---|
Probab=89.07 E-value=1.5 Score=39.12 Aligned_cols=81 Identities=14% Similarity=0.227 Sum_probs=51.5
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC--CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG--PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYY 134 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~--~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~ 134 (466)
.+|..++++... ...+.|+|..+.... .-.|+|....+..+..+... ......|.+|+|++.|.
T Consensus 100 ~pP~~l~~~~~~--~~~l~l~W~~p~~~~~l~yev~y~~~~~~~w~~~~~~------------~~~~~~l~~l~p~~~Y~ 165 (199)
T 2b5i_C 100 WAPENLTLHKLS--ESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQSVD------------YRHKFSLPSVDGQKRYT 165 (199)
T ss_dssp CCCEEEEEEEEE--TTEEEEEEECSSCSTTCEEEEEEEETTCSSCEEEEEC------------SSCEEEECSCCTTSCEE
T ss_pred CCCcEEEEEECC--CCCEEEEECCCCCCCceEEEEEEeecCCcccEEEecc------------CceEEEecCCCCCcEEE
Confidence 468888888654 268999999985211 24688888665444332110 11346789999999999
Q ss_pred EEeccC------------CccceEEEECC
Q 012311 135 YKIGSG------------DSSREFWFQTP 151 (466)
Q Consensus 135 Yrv~~~------------~~s~~~~F~T~ 151 (466)
.||... .||+...|.|.
T Consensus 166 vqVR~~~~~~~~~~g~WSeWS~~~~~~t~ 194 (199)
T 2b5i_C 166 FRVRSRFNPLCGSAQHWSEWSHPIHWGSN 194 (199)
T ss_dssp EEEEEECCSSSCCCCCCCCCCCCEEC---
T ss_pred EEEEEeccCCcCcCCeECCCCCCEEecCC
Confidence 998531 35566666664
|
| >3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.03 E-value=0.31 Score=50.51 Aligned_cols=88 Identities=16% Similarity=0.126 Sum_probs=55.8
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~ 132 (466)
.+|..+++... ..+++.|+|..+.... .-.|+|....+..... ...+. ......+.+.|.+|+|+|+
T Consensus 383 ~PP~nl~v~~~--~stsl~LsW~~P~~~~~~~L~YeVrYr~~~~~~~~~----~vsv~---~~~~~~~s~~l~~L~PgT~ 453 (483)
T 3e0g_A 383 HTPTSFKVKDI--NSTAVKLSWHLPGNFAKINFLCEIEIKKSNSVQEQR----NVTIQ---GVENSSYLVALDKLNPYTL 453 (483)
T ss_dssp CCCEEEEECCS--SSSSCCEEEECCSCCTTSBCCCEEEEECSSSCCCEE----ECCCB---CCSSSBCCCCCCSCCSSSS
T ss_pred CCCeeeEEEEe--cCCeEEEEECCCCCCCCceEEEEEEEEECCCCCceE----EEEEe---ccCCceeEEEEeccCCCcE
Confidence 46888887643 3578999999875322 3478888766432111 00110 0011234578999999999
Q ss_pred EEEEeccC--------CccceEEEECCCC
Q 012311 133 YYYKIGSG--------DSSREFWFQTPPK 153 (466)
Q Consensus 133 Y~Yrv~~~--------~~s~~~~F~T~p~ 153 (466)
|..||... .||+...|+|+++
T Consensus 454 Y~vrVRA~~~g~g~WSeWS~~~~f~T~E~ 482 (483)
T 3e0g_A 454 YTFRIRCSTETFWKWSKWSNKKQHLTTEA 482 (483)
T ss_dssp CEEEEECCCSSCCCCCCCCCCCCCCCCCC
T ss_pred EEEEEEEeeCCCCCcCCCCCceeeECCCC
Confidence 99998642 4677788988754
|
| >2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=88.89 E-value=1.5 Score=40.92 Aligned_cols=83 Identities=13% Similarity=0.222 Sum_probs=53.5
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC--CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG--PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYY 134 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~--~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~ 134 (466)
.+|..++++... ...+.|+|..+.... .-.|+|....+..+..+... ......|.+|+|++.|.
T Consensus 138 ~PP~nl~v~~~~--~~~l~l~W~~P~~~~~L~Yevry~~~~~~~W~~~~~~------------~~~~~~l~~L~p~~~Y~ 203 (247)
T 2erj_C 138 WAPENLTLHKLS--ESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQSVD------------YRHKFSLPSVDGQKRYT 203 (247)
T ss_dssp CCCEEEEEEESS--SSCEEEEEECSSCCTTEEEEEEEECSSCSSCEEEEEC------------SSCEEEESCCCTTSCEE
T ss_pred CCCCeEEEEECC--CCcEEEEECCCCCCCcEEEEEEEeeCCCCCCEEEecC------------CceEEEecCCCCCCEEE
Confidence 468888887653 368999999985211 23588887665444433210 11246789999999999
Q ss_pred EEecc---------C---CccceEEEECCCC
Q 012311 135 YKIGS---------G---DSSREFWFQTPPK 153 (466)
Q Consensus 135 Yrv~~---------~---~~s~~~~F~T~p~ 153 (466)
.||.. + .||+...|.|.+.
T Consensus 204 vqVR~k~~~~~~~~g~WSeWS~~~~~~t~~~ 234 (247)
T 2erj_C 204 FRVRSRFNPLCGSAQHWSEWSHPIHWGSNTS 234 (247)
T ss_dssp EEEEEEECSSSCCCCCCCCCCCCEEECC---
T ss_pred EEEEEEeCCCCCCCCccCCCCcCEEEECCCC
Confidence 99852 1 4677778888654
|
| >3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.63 E-value=1 Score=40.44 Aligned_cols=72 Identities=17% Similarity=0.098 Sum_probs=41.1
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC---CcEEEEeecCC-CCceEEEeEEEEeeeeccccceEEEEEecCCCCCCE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG---PSTVSYGTSAD-KFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~---~~~V~yg~~~~-~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~ 132 (466)
.+|..+++.... ..+++.|+|..+..+. .-.|+|....+ ..+..+.- .......+.|.+|+|||.
T Consensus 111 ~pP~~l~v~~~~-~~~~l~l~W~~P~~~~~~l~yev~y~~~~~~~~w~~~~~----------~~~~~~~~~l~~L~p~t~ 179 (206)
T 3v6o_A 111 LPPSSVKAEITI-NIGLLKISWEKPVFPENNLQFQIRYGLSGKEVQWKMYEV----------YDAKSKSVSLPVPDLCAV 179 (206)
T ss_dssp CCCCSCEEEEET-TTTEEEEEC--------CEEEEEEEEESSSSCCCEEEEE----------CC---CEEEECCSCTTSC
T ss_pred CCCCceEeEEec-CCCeEEEEECCCCCCCCcEEEEEEEEECCCCCceEEEec----------ccCcceeEEeecCCCCCE
Confidence 568888887652 3579999999874322 23567776542 22222210 011123578999999999
Q ss_pred EEEEecc
Q 012311 133 YYYKIGS 139 (466)
Q Consensus 133 Y~Yrv~~ 139 (466)
|..||..
T Consensus 180 Y~vqVRa 186 (206)
T 3v6o_A 180 YAVQVRC 186 (206)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999964
|
| >4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.21 E-value=2.9 Score=38.15 Aligned_cols=80 Identities=19% Similarity=0.178 Sum_probs=52.0
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCC-----C------------CcEEEEeecCCCCceEEEeEEEEeeeeccccceE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEP-----G------------PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYI 119 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~-----~------------~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~ 119 (466)
..|+ |.|+.. .+++.|.|.-+..+ + .-.|.|+..++... ... .. . -
T Consensus 110 gPP~-v~v~~~---~~~l~V~~~~P~~~~~~~~~~~~s~~~i~~~l~Y~V~y~~~~~~~~--~~~---~~------~--~ 172 (221)
T 4doh_R 110 GPPE-VALTTD---EKSISVVLTAPEKWKRNPEDLPVSMQQIYSNLKYNVSVLNTKSNRT--WSQ---CV------T--N 172 (221)
T ss_dssp CCCE-EEEECC---SSCEEEEEECCBCCCSSTTSCCCBHHHHSTTCEEEEEEEETTTTEE--EEE---EE------C--S
T ss_pred CCCE-EEEEEC---CCEEEEEEeCCCcccccCCCCceEHHHhcCceEEEEEEEECCCCcE--EEE---ee------c--C
Confidence 3465 888843 46899999976432 1 12677777654321 111 10 1 1
Q ss_pred EEEEecCCCCCCEEEEEecc--------CCccceEEEECCCC
Q 012311 120 HQCLVDGLEYDTKYYYKIGS--------GDSSREFWFQTPPK 153 (466)
Q Consensus 120 h~v~l~gL~P~T~Y~Yrv~~--------~~~s~~~~F~T~p~ 153 (466)
+.++|.+|+|+|.|..+|.. +.+|....|+|.+.
T Consensus 173 ~~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~d 214 (221)
T 4doh_R 173 HTLVLTWLEPNTLYCVHVESFVPGPPRRAQPSEKQCARTLKD 214 (221)
T ss_dssp SEEEECSCCTTCEEEEEEEEECSSSCCCCCCCEEEEEECCCC
T ss_pred cEEEEecCCCCCcEEEEEEEEEcCCCCCCCCCCCEeEecCCC
Confidence 35789999999999999853 24678888999764
|
| >2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A | Back alignment and structure |
|---|
Probab=88.20 E-value=3.9 Score=40.78 Aligned_cols=98 Identities=13% Similarity=0.138 Sum_probs=58.5
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC----------CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG----------PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDG 126 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~----------~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~g 126 (466)
.+|..|.++..+ +.+.|+|..+.... .-.|+|.... ..+..+.. .. .....+.+.+.+
T Consensus 110 ~pP~~l~v~~~~---~~~~l~W~~p~~~~~~~~~~~~~l~Y~v~yr~~~-~~w~~~~~-~~-------~~~~~~~~~~~~ 177 (419)
T 2gys_A 110 PEPRDLQISTDQ---DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQ-DSWEDAAI-LL-------SNTSQATLGPEH 177 (419)
T ss_dssp CCCEEEEEEEET---TEEEEEEECCC-----CCSCGGGEEEEEEEEETT-SCSTTCEE-EE-------ESSSEEEECTTT
T ss_pred CCCCceEEEecC---CeEEEEECCCccccccchhccCceEEEEEEccCC-CChhheee-ec-------ccceEEEechhh
Confidence 569899887653 49999999875321 1356777664 22222211 00 011222333449
Q ss_pred CCCCCEEEEEecc---------C---CccceEEEECCCCCCCCCCeEEEEEcc
Q 012311 127 LEYDTKYYYKIGS---------G---DSSREFWFQTPPKIDPDASYKFGIIGD 167 (466)
Q Consensus 127 L~P~T~Y~Yrv~~---------~---~~s~~~~F~T~p~~g~~~~~~f~v~GD 167 (466)
|.|+++|..||.. | .||+...|+|++.. +..+-.+-.+.+
T Consensus 178 L~p~~~Y~~rVra~~~~g~~~~G~wS~WS~~~~~~t~~~~-~~~p~~l~c~~~ 229 (419)
T 2gys_A 178 LMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGD-EAQPQNLECFFD 229 (419)
T ss_dssp CCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCCC-TTSCEEEEEEEC
T ss_pred cCCCCeEEEEEEEecCCCCCCCcccCCCCCceeeeccccc-cCCCceEEEEEC
Confidence 9999999999853 1 35678899998765 344555555543
|
| >1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.05 E-value=2.5 Score=45.43 Aligned_cols=80 Identities=9% Similarity=0.098 Sum_probs=46.3
Q ss_pred CC-ceEEEeeecCCCCcEEEEEEcCCCC-CC---cEEEEeecCC--------CCceEEEeEEEEeeeeccccceEEEEEe
Q 012311 58 SP-QQVHITQGDYDGKAVIISWVTPHEP-GP---STVSYGTSAD--------KFDFTAEGTVNNYTFYKYKSGYIHQCLV 124 (466)
Q Consensus 58 ~P-~qv~lt~~~~~~~~~~V~W~t~~~~-~~---~~V~yg~~~~--------~~~~~a~g~~~~y~~~~~~~~~~h~v~l 124 (466)
+| ..+.++-. ..+++.|+|..+... .. -.|+|....+ ..+..+.. .....++|
T Consensus 162 ~P~~~l~v~~~--~~~sv~l~W~pp~~~~~~~i~Y~V~~r~~~g~~~~~~~~~~w~~v~~------------~~~~~~~i 227 (680)
T 1zlg_A 162 KPRKELRFTEL--QSGQLEVKWSSKFNISIEPVIYVVQRRWNYGIHPSEDDATHWQTVAQ------------TTDERVQL 227 (680)
T ss_pred cccccceEEec--cCceEEEEEeCCCCCCCCCEEEEEEEEECCCCCcCccccCceEEEEe------------cCCCeEEe
Confidence 46 56666543 467999999976321 12 3566665422 11222211 11224689
Q ss_pred cCCCCCCEEEEEeccC-------CccceEEEECC
Q 012311 125 DGLEYDTKYYYKIGSG-------DSSREFWFQTP 151 (466)
Q Consensus 125 ~gL~P~T~Y~Yrv~~~-------~~s~~~~F~T~ 151 (466)
++|+|+|.|.|||..- ..+....|+|.
T Consensus 228 ~~L~P~t~Y~frV~A~n~~G~~~~ss~s~~~~t~ 261 (680)
T 1zlg_A 228 TDIRPSRWYQFRVAAVNVHGTRGFTAPSKHFRSS 261 (680)
T ss_pred CCCCCCCEEEEEEEEEeCCCCCCCCCCccceEcC
Confidence 9999999999999642 12334467773
|
| >2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=87.44 E-value=0.85 Score=40.24 Aligned_cols=60 Identities=15% Similarity=0.215 Sum_probs=36.1
Q ss_pred CCCcEEEEEEcCCCC-CCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEEEecc
Q 012311 70 DGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGS 139 (466)
Q Consensus 70 ~~~~~~V~W~t~~~~-~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Yrv~~ 139 (466)
..+++.|+|.-+... ..-.|+|.......... .... .+....+.|+||+|+|.|.++|..
T Consensus 124 ~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~----~~~v------~~~~~~~~i~~L~p~t~Y~~~V~A 184 (201)
T 2ha1_A 124 TASSFVVSWVSASDTVSGFRVEYELSEEGDEPQ----YLDL------PSTATSVNIPDLLPGRKYIVNVYQ 184 (201)
T ss_dssp CSCCEEEECCCSCTTEEEEEEEEEETTTCCCCE----EEEE------ETTCCEEEECSCCTTCEEEEEEEE
T ss_pred CCCeEEEEEeCCCCCccEEEEEEEECCCCCcee----EEEc------CCceeEEEeCCCCCCCEEEEEEEE
Confidence 457999999876422 12356776543221110 0010 112345789999999999999975
|
| >4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=85.93 E-value=3.1 Score=37.96 Aligned_cols=31 Identities=16% Similarity=0.332 Sum_probs=20.7
Q ss_pred EecCCCCCCEEEEEecc------CCccceEEEECCCC
Q 012311 123 LVDGLEYDTKYYYKIGS------GDSSREFWFQTPPK 153 (466)
Q Consensus 123 ~l~gL~P~T~Y~Yrv~~------~~~s~~~~F~T~p~ 153 (466)
.+.+|+|++.|.+||.. +..|++..+.+++.
T Consensus 166 ~~~~L~~~t~Y~frV~A~N~~G~Gp~S~v~t~~~~~~ 202 (232)
T 4go6_B 166 AHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQETSK 202 (232)
T ss_dssp BCBEESSSEEEEEEEEEECSSCBCCCEEEEEECC---
T ss_pred eeecCccCCceEEEEEEECCCcCCCCcccEEeccCCC
Confidence 35689999999999964 23566666666554
|
| >3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A | Back alignment and structure |
|---|
Probab=85.19 E-value=1.2 Score=43.29 Aligned_cols=67 Identities=13% Similarity=0.231 Sum_probs=40.9
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCC-CCCCcEEEEeecCCC--CceEEEe--EEEEeeeeccccceEEEEEecCCCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPH-EPGPSTVSYGTSADK--FDFTAEG--TVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~-~~~~~~V~yg~~~~~--~~~~a~g--~~~~y~~~~~~~~~~h~v~l~gL~P~T 131 (466)
.+|.-+.++.+ .+.+.++|.++. ......|.=++.... ..+.|.. +.++|+ =++|.+||
T Consensus 19 ~~~~~L~at~~---~~~v~LsWs~s~~~v~~~~VYRdT~s~~sgr~ria~~~~st~tyt-------------Dt~~~~Gt 82 (344)
T 3b4n_A 19 AAQTTLMLSQK---SDVNYLGWSTDESKVARQEVYRGTTSNPDLRERIAVLDAETRTFK-------------DADTNSGL 82 (344)
T ss_dssp -CCEEEEEEEE---TTEEEEEEEECCSSEEEEEEEEESSSCGGGCEEEEEECSSCCEEE-------------ECCCCTTC
T ss_pred CCCceeeeecc---CCeEEEEeecCCCCeeeEEEEccCCCCCCcceEEEeecccccEEE-------------ecCcCCCc
Confidence 35666766665 469999999874 222344433444433 2344432 333443 26899999
Q ss_pred EEEEEecc
Q 012311 132 KYYYKIGS 139 (466)
Q Consensus 132 ~Y~Yrv~~ 139 (466)
+|||.|..
T Consensus 83 tYyYwVk~ 90 (344)
T 3b4n_A 83 NYWYWVDV 90 (344)
T ss_dssp CCEEEEEE
T ss_pred EEEEEEEE
Confidence 99999965
|
| >2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=85.01 E-value=2 Score=46.37 Aligned_cols=89 Identities=17% Similarity=0.153 Sum_probs=54.5
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCC------CCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEP------GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYD 130 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~------~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~ 130 (466)
.+|..+.+.... .+++.|+|.-+... ..-.|+|....+......... ... .......++|++|+|+
T Consensus 361 ~~P~~~~~~~~~--~~sv~l~W~~p~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~--~~~----~~~~~~~~~i~~L~p~ 432 (731)
T 2v5y_A 361 RGPRKLEVVEVK--SRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEV--SWD----TENSHPQHTITNLSPY 432 (731)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCCHHHHCSSSCEEEEEEEEESSSSEEEEEEE--ECC----SSCSSCEEEECSCCSS
T ss_pred CCCceeEEEecc--CCeEEEEEECCCcccccceeeeEEEEEEEccCCCCccceeE--EEE----ecCCcceEEECCCCCC
Confidence 468888776553 57999999986311 123577877653222111100 000 1122345789999999
Q ss_pred CEEEEEeccC-----CccceEEEECCCC
Q 012311 131 TKYYYKIGSG-----DSSREFWFQTPPK 153 (466)
Q Consensus 131 T~Y~Yrv~~~-----~~s~~~~F~T~p~ 153 (466)
|.|.+||..- ..|....++|++.
T Consensus 433 t~Y~~~V~A~n~~G~s~S~~~~~~T~~~ 460 (731)
T 2v5y_A 433 TNVSVKLILMNPEGRKESQELIVQTDED 460 (731)
T ss_dssp CEEEEEEEEECSSCEEECCCEEEECCCC
T ss_pred CEEEEEEEEEcCCCCCCCceEEEEccCC
Confidence 9999999642 2366778888753
|
| >4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=82.86 E-value=3.4 Score=37.21 Aligned_cols=79 Identities=13% Similarity=0.015 Sum_probs=47.9
Q ss_pred eEEEeeecCCCCcEEEEEEcCCCCCCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEEEecc-
Q 012311 61 QVHITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGS- 139 (466)
Q Consensus 61 qv~lt~~~~~~~~~~V~W~t~~~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Yrv~~- 139 (466)
.|+|+.. ..++.|.|.-+...-.-.|.|+..++...... ..+. . .-..++|.+|+|+|.|..+|..
T Consensus 114 ~v~v~~~---~~~i~V~~~~p~~~l~Y~v~y~~~~~~~~~~~----~~~~----~--~~~~~~i~~L~p~t~Ycv~Vra~ 180 (206)
T 4doh_B 114 GMEITKD---GFHLVIELEDLGPQFEFLVAYWRREPGAEEHV----KMVR----S--GGIPVHLETMEPGAAYCVKAQTF 180 (206)
T ss_dssp CEEEEEE---TTEEEEEECCCCTTCEEEEEEEESSSSCCCEE----EEEC----C--SSSEEEEEECCSSSCEEEEEEEE
T ss_pred eEEEEeC---CCEEEEEecCCCCcEEEEEEEEEcCCCceeEE----eEEc----c--CCeEEEEeCCCCCCcEEEEEEEE
Confidence 4778732 57999999865222245788887765432111 1110 0 1124789999999999999864
Q ss_pred -------CCccceEEEECCC
Q 012311 140 -------GDSSREFWFQTPP 152 (466)
Q Consensus 140 -------~~~s~~~~F~T~p 152 (466)
+..|...-|+|..
T Consensus 181 ~~~~~~~g~~S~~~C~~t~~ 200 (206)
T 4doh_B 181 VKAIGRYSAFSQTECVEVQG 200 (206)
T ss_dssp EGGGTEECCCCCCEEECC--
T ss_pred ecCCCCCCCCCCCEeEEccc
Confidence 2356666777753
|
| >1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A | Back alignment and structure |
|---|
Probab=82.53 E-value=1.9 Score=38.18 Aligned_cols=70 Identities=19% Similarity=0.225 Sum_probs=43.7
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC---CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCC-CCCCE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG---PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGL-EYDTK 132 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~---~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL-~P~T~ 132 (466)
.+|..+.+.... .+++.++|.-+...+ .-.|+|....+... .+.. .......++|.+| +|+|.
T Consensus 9 ~~P~~l~~~~~~--~~sv~l~W~~p~~~~~~~~Y~v~~~~~~~~~~-----~~~~------~~~~~~~~~i~~L~~~~t~ 75 (215)
T 1bqu_A 9 EKPKNLSCIVNE--GKKMRCEWDGGRETHLETNFTLKSEWATHKFA-----DCKA------KRDTPTSCTVDYSTVYFVN 75 (215)
T ss_dssp CCCEEEEEEEET--TSCCEEEEECCSCCSSCCEEEEEEEETTEECC-----CEEC------CSSCTTEEECSSCCCTTSC
T ss_pred CCCEeeEeEECC--CCcEEEEcCCCCCCCCCceEEEEEEEcCCCcc-----cccc------ccCCcceEEEcCCcccccc
Confidence 468888776543 478999999875432 23555654332110 0000 1122346899999 99999
Q ss_pred EEEEecc
Q 012311 133 YYYKIGS 139 (466)
Q Consensus 133 Y~Yrv~~ 139 (466)
|.+||..
T Consensus 76 Y~~~V~A 82 (215)
T 1bqu_A 76 IEVWVEA 82 (215)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999975
|
| >2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens} | Back alignment and structure |
|---|
Probab=82.52 E-value=4.5 Score=37.54 Aligned_cols=69 Identities=16% Similarity=0.257 Sum_probs=41.3
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC-Cc----EEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG-PS----TVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~-~~----~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T 131 (466)
..|..+.+... ..+++.|+|..+...+ .. .|+|...+...+...... .....+|.+|+|++
T Consensus 200 ~~p~~~~~~~~--~~~~v~l~w~~p~~~g~~~i~~y~v~~~~~~~~~w~~~~~~------------~~~~~~i~~l~~~~ 265 (305)
T 2nzi_A 200 DPPRGVKVSDV--SRDSVNLTWTEPASDGGSKITNYIVEKCATTAERWLRVGQA------------RETRYTVINLFGKT 265 (305)
T ss_dssp CCCEEEEEESC--CSSCEEEEEECCSCCSBSCEEEEEEEEEETTSCCEEEEEEE------------SSSEEEECSCCSSC
T ss_pred CCCCCceeeec--cCCEEEEEEcCCccCCCCceeEEEEEEecCCCCccEECccc------------cCceEEecCCCCCC
Confidence 35666665533 3578999999753222 23 344544443333322111 02346899999999
Q ss_pred EEEEEecc
Q 012311 132 KYYYKIGS 139 (466)
Q Consensus 132 ~Y~Yrv~~ 139 (466)
.|.|||..
T Consensus 266 ~y~~~~~A 273 (305)
T 2nzi_A 266 SYQFRVIA 273 (305)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEE
Confidence 99999965
|
| >2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E | Back alignment and structure |
|---|
Probab=82.24 E-value=0.48 Score=52.93 Aligned_cols=45 Identities=22% Similarity=0.222 Sum_probs=31.5
Q ss_pred EEEEecCCCCCCEEEEEecc-----------CCccceEEEECCCCCCCCCCeEEEEE
Q 012311 120 HQCLVDGLEYDTKYYYKIGS-----------GDSSREFWFQTPPKIDPDASYKFGII 165 (466)
Q Consensus 120 h~v~l~gL~P~T~Y~Yrv~~-----------~~~s~~~~F~T~p~~g~~~~~~f~v~ 165 (466)
..++|++|+|+|.|.+||.. +.+|+...|+|++.+ +..|..+-+.
T Consensus 549 ~~~~l~~L~P~T~Y~~~V~A~~n~~G~~~~~~~~S~~v~~~T~~~~-Ps~P~~l~~~ 604 (897)
T 2dtg_E 549 PGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDATN-PSVPLDPISV 604 (897)
T ss_dssp CEEEECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCCCCC-CCCCEEEEEE
T ss_pred cceEeCCCCCCcEEEEEEEEEEeccCCccccCCccceEEEECCCCC-CcCCcceEEE
Confidence 45789999999999999976 235667788997643 2344444433
|
| >4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=80.66 E-value=1.2 Score=40.71 Aligned_cols=33 Identities=21% Similarity=0.106 Sum_probs=23.7
Q ss_pred EEEecCCCCCCEEEEEeccC------CccceEEEECCCC
Q 012311 121 QCLVDGLEYDTKYYYKIGSG------DSSREFWFQTPPK 153 (466)
Q Consensus 121 ~v~l~gL~P~T~Y~Yrv~~~------~~s~~~~F~T~p~ 153 (466)
..++++|+|+|.|.+||..- ..|....++|.+.
T Consensus 47 ~~~~~~L~p~t~Y~frV~A~n~~G~g~~s~~~~~~t~~~ 85 (232)
T 4go6_B 47 QLKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTCLP 85 (232)
T ss_dssp --CEEECCTTCEEEEEEEEEETTEEEEECCCEEEECCCT
T ss_pred EEEeCCCCCCCEEEEEEEEEeCCCccccccceeeeecCC
Confidence 35788999999999999652 3466677777543
|
| >1q38_A Fibronectin; amyloid fibril, anastellin, extracellular matrix, dynamic fluctuations, conformational exchange, chaps, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=80.46 E-value=0.63 Score=35.46 Aligned_cols=30 Identities=23% Similarity=0.217 Sum_probs=21.4
Q ss_pred EecCCCCCCEEEEEecc---CCc--cceEEEECCC
Q 012311 123 LVDGLEYDTKYYYKIGS---GDS--SREFWFQTPP 152 (466)
Q Consensus 123 ~l~gL~P~T~Y~Yrv~~---~~~--s~~~~F~T~p 152 (466)
+|.||+||++|.=++-+ ... ...+.|+|--
T Consensus 41 tIsGLkPGvtYegQLisV~r~g~~EvtrfdfTT~~ 75 (89)
T 1q38_A 41 TIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTTTS 75 (89)
T ss_dssp CCCCCCTTCCEEEEEEEECTTSCCCEEEEEECSSS
T ss_pred EEeccCCCcEEEEEEEeeeecccCCceEEEEEecc
Confidence 78999999999988754 223 3456777653
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 466 | ||||
| d2qfra2 | 312 | d.159.1.1 (A:121-432) Plant purple acid phosphatas | 5e-82 | |
| d2qfra1 | 112 | b.1.12.1 (A:9-120) Purple acid phosphatase, N-term | 6e-49 | |
| d1xzwa1 | 119 | b.1.12.1 (A:1-119) Purple acid phosphatase, N-term | 1e-46 | |
| d1utea_ | 302 | d.159.1.1 (A:) Mammalian purple acid phosphatase { | 5e-10 | |
| d1uf3a_ | 228 | d.159.1.6 (A:) Hypothetical protein TT1561 {Thermu | 8e-04 | |
| d1va9a1 | 109 | b.1.2.1 (A:8-116) Down syndrome cell adhesion mole | 0.002 | |
| d1x5ka1 | 111 | b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [ | 0.002 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 254 bits (648), Expect = 5e-82
Identities = 176/306 (57%), Positives = 218/306 (71%), Gaps = 16/306 (5%)
Query: 153 KIDPDASYKFGIIGDLGQTYNSLSTLEHYMESG--AQTVLFLGDLSYADRYQFIDVGVRW 210
+ D Y FG+IGDLGQ+++S +TL HY S QTVLF+GDLSYADRY D VRW
Sbjct: 1 QTGLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHD-NVRW 59
Query: 211 DSWGRFVERSAAYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYA 270
D+WGRF ERS AYQPWIW+AGNHEIE+ + E PFK + +RY P+ AS+S+SP WY+
Sbjct: 60 DTWGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYS 119
Query: 271 IRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFME 330
I+RASAHIIVLSSYS + + TPQ+ WL++EL+KV R +TPWLIVLMH P+YNS HFME
Sbjct: 120 IKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFME 179
Query: 331 GESMRAAFESWFVRYKVD-------------YRISNLHYNISSGDCFPVPDKSAPVYITV 377
GE+MR FE+WFV+YKVD R+SN+ Y I++G C PV D+SAPVYIT+
Sbjct: 180 GEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITI 239
Query: 378 GDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGKKVATDSFI 437
GD GN + PQP+YSAFREAS+GH +IKNRTHA + WNRN DG V DS
Sbjct: 240 GDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVW 299
Query: 438 LHNQYW 443
N++W
Sbjct: 300 FFNRHW 305
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 112 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 161 bits (408), Expect = 6e-49
Identities = 56/111 (50%), Positives = 78/111 (70%)
Query: 42 DIPLDNEAFAVPKGHNSPQQVHITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFT 101
D+PLD++ F VP G+N+PQQVHITQGD G+A+IISWVT EPG S V Y + +
Sbjct: 2 DMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRI 61
Query: 102 AEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGSGDSSREFWFQTPP 152
A+G ++ Y F+ Y SG+IH + L+Y+TKYYY++G +++R F F TPP
Sbjct: 62 AKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRNTTRRFSFITPP 112
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} Length = 119 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Score = 155 bits (393), Expect = 1e-46
Identities = 62/114 (54%), Positives = 81/114 (71%), Gaps = 1/114 (0%)
Query: 40 SIDIPLDNEAFAVPKGHNSPQQVHITQGDYDGKAVIISWVTPH-EPGPSTVSYGTSADKF 98
+D+P D++ FAVP G+N+PQQVHITQGDY+G+ VIISW TP+ + G + V Y + K
Sbjct: 6 DVDMPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKS 65
Query: 99 DFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGSGDSSREFWFQTPP 152
A GTV Y +Y Y S +IH C + LEYDTKYYY++G GD+ R+FWF TPP
Sbjct: 66 QKRAMGTVVTYKYYNYTSAFIHHCTIKDLEYDTKYYYRLGFGDAKRQFWFVTPP 119
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Score = 58.3 bits (139), Expect = 5e-10
Identities = 43/306 (14%), Positives = 89/306 (29%), Gaps = 43/306 (14%)
Query: 156 PDASYKFGIIGDLGQTYNSLSTLEHYMESGAQT-----------VLFLGDLSYADRYQFI 204
P +F +GD G N+ M + +L LGD Y
Sbjct: 1 PTPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDA 60
Query: 205 DVGVRWDSWGRFVERSAAYQ--PWIWSAGNHEIEYMTY----MGEVVPFKSYLHRYPTPH 258
R+ V + + PW AGNH+ ++ ++ Y
Sbjct: 61 K-DKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFPSPYYRLR 119
Query: 259 LASKSSSPLWYAIRRASAHIIVLSSYSPFVKY---------TPQWEWLREELKKVDREKT 309
S+ + + S + Q W++++L K
Sbjct: 120 FKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAA---AKE 176
Query: 310 PWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYNISSGDCFPVPDK 369
+++V H P+++ E + +KV + +N+ + D+
Sbjct: 177 DYVLVAGHYPVWSIAEHGPTHC--LVKQLLPLLTTHKVTAYLCGHDHNLQY-----LQDE 229
Query: 370 SAPVYITVGDGGNQEGLAGKFRYPQPD----YSAFREASYGHSTLEIKNRTHAFYHWNRN 425
+ ++ G G + R + + G + +EI + + +
Sbjct: 230 NGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEITPKEMSVTYIEA- 288
Query: 426 DDGKKV 431
GK +
Sbjct: 289 -SGKSL 293
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} Length = 228 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Score = 38.5 bits (88), Expect = 8e-04
Identities = 13/169 (7%), Positives = 38/169 (22%), Gaps = 11/169 (6%)
Query: 178 LEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWI-WSAGNHEIE 236
++ ++GA + +G+L + + + F + + G +
Sbjct: 25 VKLAPDTGADAIALIGNL--------MPKAAKSRDYAAFFRILSEAHLPTAYVPGPQDAP 76
Query: 237 YMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEW 296
Y+ E + H + W
Sbjct: 77 IWEYLREAANVELVHPEMRNVHETFTFWRGPYLVAGVGGEIADEGEPEEHE--ALRYPAW 134
Query: 297 LREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRY 345
+ E K E + + + + + + ++
Sbjct: 135 VAEYRLKALWELKDYPKIFLFHTMPYHKGLNEQGSHEVAHLIKTHNPLL 183
|
| >d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]} Length = 109 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.0 bits (82), Expect = 0.002
Identities = 19/107 (17%), Positives = 35/107 (32%), Gaps = 10/107 (9%)
Query: 51 AVPKGHNSPQQVHITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYT 110
A P G P V + +++ ++W P + + V G + +
Sbjct: 6 AAPDG--PPMDVTLQ--PVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSI 61
Query: 111 FYKYKSGYIHQCLVDGLEYDTKYYYKI------GSGDSSREFWFQTP 151
+G +D L+ +Y + G+G SS E T
Sbjct: 62 VEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTL 108
|
| >d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 111 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Score = 35.7 bits (81), Expect = 0.002
Identities = 24/108 (22%), Positives = 33/108 (30%), Gaps = 12/108 (11%)
Query: 51 AVPKGHNSPQQVHITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYT 110
VP P+ V + + K +I++W P E Y
Sbjct: 9 LVPTS--PPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEP 66
Query: 111 FYKYKSGYIHQCLVDGLEYDTKYYYKI------GSGDSSREFWFQTPP 152
G + L DT YY+KI G G S F+TP
Sbjct: 67 V----VGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 110
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 466 | |||
| d2qfra2 | 312 | Plant purple acid phosphatase, catalytic domain {K | 100.0 | |
| d1utea_ | 302 | Mammalian purple acid phosphatase {Pig (Sus scrofa | 100.0 | |
| d2qfra1 | 112 | Purple acid phosphatase, N-terminal domain {Kidney | 99.96 | |
| d1xzwa1 | 119 | Purple acid phosphatase, N-terminal domain {Sweet | 99.95 | |
| d2hy1a1 | 256 | Rv0805 cyclic nucleotide phosphodiesterase {Mycoba | 99.86 | |
| d2nxfa1 | 320 | Uncharacterized C17orf48 homolog zgc:64213 {Zebraf | 99.81 | |
| d3d03a1 | 271 | Glycerophosphodiesterase GpdQ {Enterobacter aeroge | 99.79 | |
| d1uf3a_ | 228 | Hypothetical protein TT1561 {Thermus thermophilus | 99.45 | |
| d2yvta1 | 257 | Uncharacterized protein Aq_1956 {Aquifex aeolicus | 99.41 | |
| d2a22a1 | 193 | Vacuolar protein sorting 29, VPS29 {Cryptosporidiu | 98.82 | |
| d1z2wa1 | 182 | Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus | 98.79 | |
| d3ck2a1 | 173 | Uncharacterized protein SP1879 {Streptococcus pneu | 98.58 | |
| d1nnwa_ | 251 | Hypothetical protein PF1291 {Archaeon Pyrococcus f | 98.56 | |
| d1ii7a_ | 333 | Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 98.42 | |
| d1s3la_ | 165 | Putative phosphodiesterase MJ0936 {Methanococcus j | 98.35 | |
| d1x4xa1 | 93 | Fibronectin type-III domain containing protein 3a, | 97.94 | |
| d1xm7a_ | 188 | Hypothetical protein aq_1666 {Aquifex aeolicus [Ta | 97.93 | |
| d1x5aa1 | 94 | Ephrin type-A receptor 1 {Mouse (Mus musculus) [Ta | 97.86 | |
| d1x5xa1 | 96 | Fibronectin type-III domain containing protein 3a, | 97.81 | |
| d1x5ka1 | 111 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 97.7 | |
| d1usha2 | 337 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 97.68 | |
| d1qg3a1 | 92 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 97.67 | |
| d2crza1 | 97 | Fibronectin type-III domain containing protein 3a, | 97.61 | |
| d2haza1 | 101 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 97.6 | |
| d1x5fa1 | 107 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 97.54 | |
| d1x5ga1 | 103 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 97.52 | |
| d2djsa1 | 95 | Ephrin type-B receptor 1 {Human (Homo sapiens) [Ta | 97.52 | |
| d1x5la1 | 98 | Ephrin type-A receptor 8 {Human (Homo sapiens) [Ta | 97.48 | |
| d1tdqa2 | 92 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 97.46 | |
| d2b5ib2 | 104 | Interleukin-2 receptor beta chain {Human (Homo sap | 97.45 | |
| d2vkwa2 | 93 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 97.45 | |
| d1su1a_ | 184 | Phosphodiesterase yfcE {Escherichia coli [TaxId: 5 | 97.33 | |
| d1wf5a1 | 108 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 97.33 | |
| d3d48r2 | 104 | Prolactin receptor {Human (Homo sapiens) [TaxId: 9 | 97.33 | |
| d1erna2 | 105 | Erythropoietin (EPO) receptor {Human (Homo sapiens | 97.32 | |
| d1x5ja1 | 100 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 97.31 | |
| d1f6fb2 | 103 | Prolactin receptor {Rat (Rattus norvegicus) [TaxId | 97.3 | |
| d1x3da1 | 105 | Fibronectin type-III domain containing protein 3a, | 97.28 | |
| d2gysa2 | 114 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 97.27 | |
| d1owwa_ | 93 | Fibronectin, different Fn3 modules {Human (Homo sa | 97.27 | |
| d3c9fa2 | 322 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 97.24 | |
| d1bqua2 | 115 | Cytokine receptor gp130 cytokine-binding domains { | 97.19 | |
| d1x5za1 | 102 | Receptor-type tyrosine-protein phosphatase delta, | 97.19 | |
| d1k85a_ | 88 | Fibronectin type III domain from chitinase A1. {Ba | 97.18 | |
| d1x4ya1 | 101 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 97.16 | |
| d1iarb2 | 101 | Interleukin-4 receptor alpha chain {Human (Homo sa | 97.11 | |
| d1v5ja_ | 108 | KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | 97.11 | |
| d2cuha1 | 102 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 97.09 | |
| d1fnfa3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 97.09 | |
| d2d9qb2 | 105 | Granulocyte colony-stimulating factor (GC-SF) rece | 97.05 | |
| d1va9a1 | 109 | Down syndrome cell adhesion molecule-like protein | 97.05 | |
| d1wfta_ | 123 | Host cell factor 2, HCF-2 {Mouse (Mus musculus) [T | 97.02 | |
| d2cuma1 | 93 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 97.02 | |
| d1qr4a2 | 88 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 97.0 | |
| d1tena_ | 90 | Tenascin {Human (Homo sapiens) [TaxId: 9606]} | 97.0 | |
| d1uena_ | 125 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 96.99 | |
| d1uc6a_ | 109 | Ciliary neurotrophic factor receptor alpha {Human | 96.96 | |
| d1ueya_ | 127 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 96.96 | |
| d2ibga1 | 95 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 96.94 | |
| d2b5ic1 | 95 | Cytokine receptor common gamma chain {Human (Homo | 96.93 | |
| d1cd9b2 | 106 | Granulocyte colony-stimulating factor (GC-SF) rece | 96.92 | |
| d2crma1 | 107 | Fibronectin type-III domain containing protein 3a, | 96.91 | |
| d1wisa1 | 111 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 96.86 | |
| d1x4za1 | 108 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 96.86 | |
| d1fnfa2 | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.83 | |
| d1fnha1 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.82 | |
| d2z1aa2 | 302 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 96.8 | |
| d1tdqa1 | 93 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 96.79 | |
| d1fnha2 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.78 | |
| d1n26a3 | 104 | Interleukin-6 receptor alpha chain, domains 2 and | 96.74 | |
| d1x5ya1 | 98 | Myosin binding protein C, fast-type {Mouse (Mus mu | 96.71 | |
| d1cfba1 | 100 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 96.7 | |
| d1x5ha1 | 119 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.68 | |
| d1fnfa1 | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.63 | |
| d2ic2a1 | 107 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 96.63 | |
| d1qr4a1 | 87 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 96.63 | |
| d1axib2 | 106 | Growth hormone receptor {Human (Homo sapiens) [Tax | 96.61 | |
| d1tdqa3 | 86 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 96.58 | |
| d1qg3a2 | 103 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 96.55 | |
| d1ujta_ | 120 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 96.5 | |
| d1fnha3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.48 | |
| d1wfoa1 | 117 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 96.42 | |
| d1j8ka_ | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.37 | |
| d1wfua_ | 120 | Fibronectin type 3 and ankyrin repeat domains 1 pr | 96.26 | |
| d1bpva_ | 104 | Type I titin module {Human (Homo sapiens) [TaxId: | 96.26 | |
| d1wk0a_ | 137 | Fibronectin type-III domain containing protein 3a, | 96.24 | |
| d2fnba_ | 95 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.22 | |
| d2dn7a1 | 94 | Receptor-type tyrosine-protein phosphatase F, PTPR | 96.11 | |
| d1x5ia1 | 113 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 95.98 | |
| d1uema_ | 117 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 95.88 | |
| d2cuia1 | 101 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 95.81 | |
| d1wfna1 | 106 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 95.69 | |
| d1fnaa_ | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.44 | |
| d1cfba2 | 105 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 95.16 | |
| d1g5ba_ | 219 | lambda ser/thr protein phosphatase {Bacteriophage | 95.02 | |
| d2gysa4 | 100 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 94.71 | |
| d1wj3a_ | 117 | Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxI | 94.63 | |
| d1cd9b1 | 107 | Granulocyte colony-stimulating factor (GC-SF) rece | 94.62 | |
| d2dtge1 | 102 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 94.6 | |
| d2dtge3 | 125 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 94.17 | |
| d2z06a1 | 252 | Hypothetical protein TTHA0625 {Thermus thermophilu | 93.92 | |
| d1fyhb1 | 98 | Interferon-gamma receptor alpha chain {Human (Homo | 93.78 | |
| d1t71a_ | 281 | Hypothetical protein MPN349 {Mycoplasma pneumoniae | 93.39 | |
| d3d85d3 | 94 | The p40 domain of interleukin-12 (IL-12 beta chain | 92.63 | |
| d2cspa1 | 117 | Rim binding protein 2 {Human (Homo sapiens) [TaxId | 92.05 | |
| d1bqua1 | 95 | Cytokine receptor gp130 cytokine-binding domains { | 92.0 | |
| d1t70a_ | 255 | Putative phosphatase DR1281 {Deinococcus radiodura | 89.74 | |
| d1y6kr1 | 99 | Interleukin-10 receptor 1, IL-10R1 {Human (Homo sa | 89.38 | |
| d2dtge2 | 196 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 87.6 | |
| d1s95a_ | 324 | Serine/threonine protein phosphatase 5, PP5 {Human | 83.5 | |
| d1jk7a_ | 294 | Protein phosphatase-1 (PP-1) {Human (Homo sapiens) | 82.92 | |
| d3c5wc1 | 288 | Protein phosphatase 2A catalytic subunit alpha iso | 81.56 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=100.00 E-value=1.1e-62 Score=488.94 Aligned_cols=294 Identities=58% Similarity=1.026 Sum_probs=259.6
Q ss_pred CCCCCeEEEEEccCCCCCCcHHHHHHHHHh--CCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCC
Q 012311 155 DPDASYKFGIIGDLGQTYNSLSTLEHYMES--GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGN 232 (466)
Q Consensus 155 g~~~~~~f~v~GD~g~~~~~~~tl~~~~~~--~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GN 232 (466)
|++.|+||+++||+|.+..+..++.++... +|||||++||++|+++....+ ..+||.|++.++++.+.+|+|+++||
T Consensus 3 g~~~p~~F~v~GD~g~~~~~~~~~~~~~~~~~~pdfvl~~GDl~Y~~~~~~~~-~~~wd~~~~~~~~~~~~~P~~~~~GN 81 (312)
T d2qfra2 3 GLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHD-NVRWDTWGRFTERSVAYQPWIWTAGN 81 (312)
T ss_dssp CSSCCEEEEEECSCCSBHHHHHHHHHHHHCSSCCSEEEECSCCCCGGGSGGGC-THHHHHHHHHHHHHHTTSCEEECCCG
T ss_pred CCCCCEEEEEEeeCCCCCchHHHHHHHHHcCCCCCEEEECCCCCcCCCCcccc-hHHHHHHHHHHHHHhhcceEEEeccc
Confidence 557899999999999887777777765443 899999999999998876555 68999999999999999999999999
Q ss_pred ceeeccCcCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCCCeE
Q 012311 233 HEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWL 312 (466)
Q Consensus 233 HE~~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~~~~~~~Q~~WL~~~L~~~~r~~~~w~ 312 (466)
||++..+..+....|..|..+|.+|.+++....+.||||++|++|||+||++..+....+|++||+++|++++|+++||+
T Consensus 82 HD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~ 161 (312)
T d2qfra2 82 HEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWL 161 (312)
T ss_dssp GGTCCBGGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHTCCTTTCCEE
T ss_pred ccccccccccccccccchhhhccCCccccCCCCCceEEEEECCEEEEEeeccccccchHHHHHHHHHHHHHHhhcCCCEE
Confidence 99876554445566888999999999888888889999999999999999998888889999999999999998999999
Q ss_pred EEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccceec------CC-------cccccCCCCCcEEEEeCC
Q 012311 313 IVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYNIS------SG-------DCFPVPDKSAPVYITVGD 379 (466)
Q Consensus 313 IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~~------~~-------~~~~~~~~~g~vyiv~G~ 379 (466)
||++|+|+|+++..+..+++.+|+.|+|||++|+||++++||+|.+. ++ .+.+..+++||||||+|+
T Consensus 162 iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~Vdlv~~GH~H~YeRt~p~~~~~~~~~~~~~~~~~~~~g~vyiv~G~ 241 (312)
T d2qfra2 162 IVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGD 241 (312)
T ss_dssp EEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCEECTTSCEEEEECC
T ss_pred EEEccccccccCCCCcccchhHHHHHHHHHHHcCcEEEEEccCcceEEEeeccCCcccccCCccccccCCCcCEEEEECc
Confidence 99999999998776656778899999999999999999999998643 22 333446789999999999
Q ss_pred CCCCCCCCCCCCCCCCCccceeeCcccEEEEEEecCCeEEEEEEEcCCCceeeeeeEEEEecccCChhhh
Q 012311 380 GGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGKKVATDSFILHNQYWASNRRR 449 (466)
Q Consensus 380 gG~~~~~~~~~~~~~p~~sa~~~~~~G~~~l~v~n~t~l~~~~~~~~dg~~~~~D~~~i~k~~~~~~~~~ 449 (466)
||+.++....+.+++|.|+++++.+|||++|+|+|.|||.|+|+++.||++++.|+|||.|+++.|.+++
T Consensus 242 gG~~~~~~~~~~~~~~~~s~~~~~~~G~~~l~v~n~t~l~~~~~~~~d~~~~~~D~~~i~~~~~~~~~~~ 311 (312)
T d2qfra2 242 AGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRHWYPVDDS 311 (312)
T ss_dssp SCTTSCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEESSSCTTCCSEEEEEECTTTCCCCCC
T ss_pred CCCcccccccccCCCCCeeEEEecCCCEEEEEEEcCCeEEEEEEECCCCCEEeeeEEEEEeCCCCCCCCC
Confidence 9998777667778899999999999999999999999999999999999987789999999999998875
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=1.8e-33 Score=273.50 Aligned_cols=259 Identities=20% Similarity=0.270 Sum_probs=181.1
Q ss_pred CCeEEEEEccCCCCCCc----H------HHHHH-HHHhCCCEEEEcccccccccccccccchhHHHHHHHH--HHHhhcC
Q 012311 158 ASYKFGIIGDLGQTYNS----L------STLEH-YMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFV--ERSAAYQ 224 (466)
Q Consensus 158 ~~~~f~v~GD~g~~~~~----~------~tl~~-~~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~--~~l~~~~ 224 (466)
.++||+|+||+|.+... . ..+.. +.+.+|||||++||++|.++..... +.+|.++.+.+ ......+
T Consensus 3 ~~~~F~vigD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfvl~~GD~vy~~g~~~~~-~~~~~~~~~~~~~~~~~~~~ 81 (302)
T d1utea_ 3 PILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAK-DKRFQETFEDVFSDPSLRNV 81 (302)
T ss_dssp CCEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTT-CTHHHHHTTTTSCSGGGTTC
T ss_pred CCeEEEEEecCCCCCCcccccHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCCCccc-HHHHHHHHHHHhhhhhhcCC
Confidence 37999999999876532 1 11222 3334999999999999987765433 45666544322 2345689
Q ss_pred CeEEcCCCceeeccCcCCcccccccccccccCCCCCCCCCCCceEEEee------CCEEEEEEcCCC---------CC--
Q 012311 225 PWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRR------ASAHIIVLSSYS---------PF-- 287 (466)
Q Consensus 225 P~~~~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~------g~v~fI~Lds~~---------~~-- 287 (466)
|+++++||||+..+.. ....+..+..++.+| ..||++.+ ++++|++||+.. ..
T Consensus 82 P~~~~~GNHD~~~~~~--~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ldt~~~~~~~~~~~~~~~ 151 (302)
T d1utea_ 82 PWHVLAGNHDHLGNVS--AQIAYSKISKRWNFP--------SPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQP 151 (302)
T ss_dssp CEEECCCHHHHHSCHH--HHHHGGGTSTTEECC--------SSSEEEEEECTTSSCEEEEEECCHHHHHCCGGGSTTCSC
T ss_pred ceEEeecccccccccc--cccchhhccccccCC--------CcccceeecccCCCCcEEEEEccceeEeecccccccccc
Confidence 9999999999864321 111233444556565 35777765 369999999841 00
Q ss_pred ------CCChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccceecCC
Q 012311 288 ------VKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYNISSG 361 (466)
Q Consensus 288 ------~~~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~~~~ 361 (466)
....+|++||+++|++ ++.+|+||++|||+|+.... .....++..|++||.+|+|+++++||+|.+..
T Consensus 152 ~~~~~~~~~~~Q~~WL~~~L~~---~~~~~~iv~~h~~~~~~~~~--~~~~~~~~~~~~ll~~~~v~~~~~GH~H~~~r- 225 (302)
T d1utea_ 152 ERPRNLALARTQLAWIKKQLAA---AKEDYVLVAGHYPVWSIAEH--GPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQY- 225 (302)
T ss_dssp CSCSCHHHHHHHHHHHHHHHHH---CCCSEEEEECSSCSSCCSSS--CCCHHHHHHTHHHHHHTTCSEEEECSSSSEEE-
T ss_pred cccccchhHHHHHHHHHHHHHh---hccCceEEEEeccccccCCC--CCchhhhhhhhHHHHhcCceEEEeCCCcceEE-
Confidence 0246899999999999 57799999999999987643 34577899999999999999999999986531
Q ss_pred cccccCCCCCcEEEEeCCCCCCCCCCCCCCCCCCCccce----eeCcccEEEEEEecCCeEEEEEEEcCCCceeeeeeEE
Q 012311 362 DCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAF----REASYGHSTLEIKNRTHAFYHWNRNDDGKKVATDSFI 437 (466)
Q Consensus 362 ~~~~~~~~~g~vyiv~G~gG~~~~~~~~~~~~~p~~sa~----~~~~~G~~~l~v~n~t~l~~~~~~~~dg~~~~~D~~~ 437 (466)
....+++.||++|+||..................+ ....+||++|+| +.+.++++++. .+|++ +|++.
T Consensus 226 ----~~~~~~~~~i~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~~~v-~~~~l~~~~~~-~~G~~--~~~~~ 297 (302)
T d1utea_ 226 ----LQDENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEI-TPKEMSVTYIE-ASGKS--LFKTK 297 (302)
T ss_dssp ----EECTTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSCCEEEEEEE-CSSCEEEEEEE-TTSCE--EEEEE
T ss_pred ----EecCCccEEEEeCCCCCCCCCccccccCCCcccceeecccCCcceEEEEEE-ECCEEEEEEEe-CCCCE--EEEEE
Confidence 13567899999999987643221111111111111 235689999999 56789999985 89996 69999
Q ss_pred EEec
Q 012311 438 LHNQ 441 (466)
Q Consensus 438 i~k~ 441 (466)
|.+|
T Consensus 298 ~~~~ 301 (302)
T d1utea_ 298 LPRR 301 (302)
T ss_dssp ECCC
T ss_pred ecCC
Confidence 9876
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.96 E-value=3.5e-29 Score=209.35 Aligned_cols=111 Identities=50% Similarity=0.943 Sum_probs=105.1
Q ss_pred CcCCCCcccccCCCCCCCceEEEeeecCCCCcEEEEEEcCCCCCCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEE
Q 012311 42 DIPLDNEAFAVPKGHNSPQQVHITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQ 121 (466)
Q Consensus 42 ~~p~~~~~~~~~~~~~~P~qv~lt~~~~~~~~~~V~W~t~~~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~ 121 (466)
|||+++++|++|++.++|+||||+++++++++|+|+|+|.+.++.+.|+||++++.+..++.|...+|+..++..+++|+
T Consensus 2 ~~p~~~~~~~~p~~~~~P~qvhlt~~~~~~tsm~VsW~T~~~~~~~~V~yg~~~~~~~~~a~~~~~~~~~~~~~~~~~h~ 81 (112)
T d2qfra1 2 DMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHH 81 (112)
T ss_dssp BCCTTSGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSSCCCCEEEEEESSSCCCEEEECEEECCBCSSCBCCEEEE
T ss_pred CCCCCCccccCCCCCCCCccEEEeCcCCCCCEEEEEEECCCCCCCcEEEEEECCCCCCcEEEEEEEEEEecccCCcEEEE
Confidence 79999999999999999999999999988899999999987788999999999999999999999888877778899999
Q ss_pred EEecCCCCCCEEEEEeccCCccceEEEECCC
Q 012311 122 CLVDGLEYDTKYYYKIGSGDSSREFWFQTPP 152 (466)
Q Consensus 122 v~l~gL~P~T~Y~Yrv~~~~~s~~~~F~T~p 152 (466)
|+|+||+|||+|+||||+++||++++|+|+|
T Consensus 82 v~Lt~L~P~T~Y~YrVG~~~~S~~~~F~T~P 112 (112)
T d2qfra1 82 TTIRKLKYNTKYYYEVGLRNTTRRFSFITPP 112 (112)
T ss_dssp EEECSCCTTCEEEEEECCSSSCEEEEEECCC
T ss_pred EEECCCCCCCEEEEEECCCCceeeEEEEcCC
Confidence 9999999999999999999999999999987
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Probab=99.95 E-value=1.4e-27 Score=201.68 Aligned_cols=113 Identities=55% Similarity=1.072 Sum_probs=104.3
Q ss_pred ccCcCCCCcccccCCCCCCCceEEEeeecCCCCcEEEEEEcCC-CCCCcEEEEeecCCCCceEEEeEEEEeeeeccccce
Q 012311 40 SIDIPLDNEAFAVPKGHNSPQQVHITQGDYDGKAVIISWVTPH-EPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGY 118 (466)
Q Consensus 40 ~~~~p~~~~~~~~~~~~~~P~qv~lt~~~~~~~~~~V~W~t~~-~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~ 118 (466)
++|||+++++|.+|++.++|+||||+++++++++|+|+|+|.. ..+.+.|+||++++.+..++.|++.+|+..++..++
T Consensus 6 ~~~~p~~~~~~~~p~~~~~P~qvhl~~~~~~~tsm~VsW~T~~~~~~~~~V~yG~~~~~~~~~a~g~s~~~~~~~~~~~~ 85 (119)
T d1xzwa1 6 DVDMPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYYNYTSAF 85 (119)
T ss_dssp HHBCCTTCGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSCCTTTTEEEEEETTCCCCEEEECEEECCEETTEECCE
T ss_pred ccccCCCCccccCCCCCCCCCEEEEEecCCCCCEEEEEEECCCCCCCCCEEEEcCCCCCCccEEEEEEEEeecccccCCe
Confidence 5689999999999999999999999999988899999999964 345789999999999999999999888877788899
Q ss_pred EEEEEecCCCCCCEEEEEeccCCccceEEEECCC
Q 012311 119 IHQCLVDGLEYDTKYYYKIGSGDSSREFWFQTPP 152 (466)
Q Consensus 119 ~h~v~l~gL~P~T~Y~Yrv~~~~~s~~~~F~T~p 152 (466)
+|+|+|+||+|||+|+||||++++|++++|||+|
T Consensus 86 ~H~v~LtgL~P~T~Y~YrVG~~~~S~~~~F~T~P 119 (119)
T d1xzwa1 86 IHHCTIKDLEYDTKYYYRLGFGDAKRQFWFVTPP 119 (119)
T ss_dssp EEEEEECCCCTTCEEEEEECCGGGCEEEEEECCC
T ss_pred EEEEEECCCCCCCEEEEEECCCCccceEEEeCCC
Confidence 9999999999999999999998899999999997
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.86 E-value=9.1e-21 Score=180.21 Aligned_cols=230 Identities=18% Similarity=0.105 Sum_probs=139.7
Q ss_pred CCeEEEEEccCCCCCC---------cHH----HHHHHHHh--CCCEEEEcccccccccccccccchhHHHHHHHHHHHhh
Q 012311 158 ASYKFGIIGDLGQTYN---------SLS----TLEHYMES--GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAA 222 (466)
Q Consensus 158 ~~~~f~v~GD~g~~~~---------~~~----tl~~~~~~--~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~ 222 (466)
-.+||+.++|+|.... ... .++++.+. +|||||++||++.. +. ...++.+.+.+.++..
T Consensus 3 ~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~pD~vl~~GDl~~~-g~-----~~~~~~~~~~l~~~~~ 76 (256)
T d2hy1a1 3 PDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADK-GE-----PAAYRKLRGLVEPFAA 76 (256)
T ss_dssp CSEEEEEECCCCBC----------CHHHHHHHHHHHHHHHTCCCSEEEECSCCBSS-CC-----HHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEeeCccCCCCcccccCcCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCC-CC-----hhHHHHHHHHhhhhhh
Confidence 3799999999996432 122 23444443 79999999999953 22 3455666666665542
Q ss_pred --cCCeEEcCCCceeeccCcCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCCCC---C-CChHHHHH
Q 012311 223 --YQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPF---V-KYTPQWEW 296 (466)
Q Consensus 223 --~~P~~~~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~~---~-~~~~Q~~W 296 (466)
.+|+++++||||... .+...+.... ......+|++..++++|++|||.... + ...+|.+|
T Consensus 77 ~~~~p~~~v~GNHD~~~-----------~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ldt~~~~~~~g~~~~~~~~w 142 (256)
T d2hy1a1 77 QLGAELVWVMGNHDDRA-----------ELRKFLLDEA---PSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGW 142 (256)
T ss_dssp HHTCEEEECCCTTSCHH-----------HHHHHTTCCC---CCCSCCCEEEEETTEEEEECCCBCTTCSSBCCCHHHHHH
T ss_pred hcCCCEEEEcccccchh-----------hhhhhhcccc---ccccccceEEEecccceeeeeeeecCCcCCcccHHHHHH
Confidence 689999999999531 1112221111 12345678999999999999996432 2 35789999
Q ss_pred HHHHHhhccCCCCCeEEEEeccccccCCCccc-ccCHHHHHHHHHHHHHcCCcEEEecccceecCCcccccCCCCCcEEE
Q 012311 297 LREELKKVDREKTPWLIVLMHVPIYNSNEAHF-MEGESMRAAFESWFVRYKVDYRISNLHYNISSGDCFPVPDKSAPVYI 375 (466)
Q Consensus 297 L~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~-~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~~~~~~~~~~~~~g~vyi 375 (466)
|+++|++. ...++||++|+|++....... .....-++.+..++++++|++++|||.|.-... ..+|+.|+
T Consensus 143 l~~~L~~~---~~~~~iv~~Hhpp~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~GH~H~~~~~------~~~gi~~~ 213 (256)
T d2hy1a1 143 LAEELATP---APDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNA------TFVGIPVS 213 (256)
T ss_dssp HHHHHTSC---CTTCEEEECSSCSSCCSSHHHHTTSBCCHHHHHHHHTTSSEEEEEECSSSSCEEE------EETTEEEE
T ss_pred HHHHHHhh---hccCceeeeecCCcccccccccccccccHHHHHHHHhccCceEEEccccchhhce------EECCEEEE
Confidence 99999973 345578899999987653211 111122467888999999999999999853221 23477788
Q ss_pred EeCCCCCCCCCCCCCCCCCCCccceeeCcccEEEEEEecCCeEEEEE
Q 012311 376 TVGDGGNQEGLAGKFRYPQPDYSAFREASYGHSTLEIKNRTHAFYHW 422 (466)
Q Consensus 376 v~G~gG~~~~~~~~~~~~~p~~sa~~~~~~G~~~l~v~n~t~l~~~~ 422 (466)
++|+...... + +..+.-........||..++|..+ .+..++
T Consensus 214 ~~~s~~~~~~----~-~~~~~~~~~~~~~~g~~lv~v~~d-~~~~~~ 254 (256)
T d2hy1a1 214 VASATCYTQD----L-TVAAGGTRGRDGAQGCNLVHVYPD-TVVHSV 254 (256)
T ss_dssp ECCCCC------------------------CEEEEEECSS-CEEEEE
T ss_pred EcCCcccccc----c-cCCCCCcccccCCCCEEEEEEECC-CEEEEe
Confidence 7765432211 1 011111222345678999998533 344443
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Probab=99.81 E-value=1.8e-19 Score=172.77 Aligned_cols=236 Identities=17% Similarity=0.114 Sum_probs=141.4
Q ss_pred eEEEEEccCCCCCC----------------cHHHH----HHHHHhCCCEEEEcccccccccccccccchhHHHHHHHHHH
Q 012311 160 YKFGIIGDLGQTYN----------------SLSTL----EHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVER 219 (466)
Q Consensus 160 ~~f~v~GD~g~~~~----------------~~~tl----~~~~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~ 219 (466)
|||++++|+|.+.. +...+ +.+.+.+|||||++||++...... . ......|.+..+.
T Consensus 4 f~f~~isD~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~i~~~~~DfVv~~GDl~~~~~~~--~-~~~~~~~~~~~~~ 80 (320)
T d2nxfa1 4 FTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRR--R-DASDRALDTVMAE 80 (320)
T ss_dssp EEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHH--T-TCHHHHHHHHHHH
T ss_pred EEEEEEecCCCCCCCCccccccccchhhHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCcc--h-hHHHHHHHHHHHH
Confidence 99999999996521 12223 334455999999999999543211 1 1222233333333
Q ss_pred Hh-hcCCeEEcCCCceeeccCcCCcccccccccccc--cCCCCCCCCCCCceEEEeeCCEEEEEEcCCCC----------
Q 012311 220 SA-AYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRY--PTPHLASKSSSPLWYAIRRASAHIIVLSSYSP---------- 286 (466)
Q Consensus 220 l~-~~~P~~~~~GNHE~~~~~~~~~~~~f~~y~~rf--~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~---------- 286 (466)
+. ..+|++.++||||...............-..++ ..............+.+..++++|+.+|+...
T Consensus 81 ~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (320)
T d2nxfa1 81 LDACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESE 160 (320)
T ss_dssp HHTTCSEEEECCCHHHHHHCCHHHHHTSTTCCCC------CEECGGGTCCCEEEEEETTEEEEECCTTSBCSSSSCTTSH
T ss_pred HHHcCCCEEEecccCccccccchhcccccccchhhhcccccccccCCCCccceeecCCCeEEEEecCccccccccccccc
Confidence 32 378999999999975321000000000000000 00000111223456778899999999997420
Q ss_pred ------------------------------------CCCChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCccccc
Q 012311 287 ------------------------------------FVKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFME 330 (466)
Q Consensus 287 ------------------------------------~~~~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~~ 330 (466)
...+.+|++||+++|+++.+ +..++|+++|+|++....... .
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~-~~~~viv~~H~p~~~~~~~~~-~ 238 (320)
T d2nxfa1 161 KHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDH-KQERVLIFSHLPVHPCAADPI-C 238 (320)
T ss_dssp HHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHH-HTCEEEEEESSCCCTTSSCGG-G
T ss_pred ccccccceeeecccccceecccccccccccccccccccccHHHHHHHHHHHHhhhh-cCCceEEEECCCCccCCCCCc-c
Confidence 01257899999999998653 345789999999987654321 1
Q ss_pred CHHHHHHHHHHHHHc-CCcEEEecccceecCCcccccCCCCCcEEEEeCCCCCCCCCCCCCCCCCCCccceeeCcccEEE
Q 012311 331 GESMRAAFESWFVRY-KVDYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDYSAFREASYGHST 409 (466)
Q Consensus 331 ~~~~r~~l~~ll~~y-~Vd~~~~gh~~~~~~~~~~~~~~~~g~vyiv~G~gG~~~~~~~~~~~~~p~~sa~~~~~~G~~~ 409 (466)
.....++|..+|.+| +|+++++||.|.. ..+ ...+|+.||++|+. .+. .....+|..
T Consensus 239 ~~~~~~~~~~~l~~~~~V~~v~~GH~H~~--~~~---~~~~g~~~i~~~~~--~~~---------------~~~~~~~~~ 296 (320)
T d2nxfa1 239 LAWNHEAVLSVLRSHQSVLCFIAGHDHDG--GRC---TDSSGAQHITLEGV--IET---------------PPHSHAFAT 296 (320)
T ss_dssp SCTTHHHHHHHHHTCTTEEEEEECSCTTC--EEE---ECTTSCEEEECCCG--GGC---------------CTTSCEEEE
T ss_pred chhhHHHHHHHHHhCCCeeEEEeCCcCCc--Cee---eccCCCEEEECCee--ecC---------------CCCCCCEEE
Confidence 222356788899999 5999999999842 112 35678999987643 211 012357899
Q ss_pred EEEecCCeEEEEEE
Q 012311 410 LEIKNRTHAFYHWN 423 (466)
Q Consensus 410 l~v~n~t~l~~~~~ 423 (466)
++|.. ..+.++.+
T Consensus 297 ~~v~~-d~~~~~~~ 309 (320)
T d2nxfa1 297 AYLYE-DRMVMKGR 309 (320)
T ss_dssp EEECS-SEEEEEEE
T ss_pred EEEEC-CEEEEEEe
Confidence 99954 45777654
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Probab=99.79 E-value=1.2e-18 Score=167.03 Aligned_cols=195 Identities=11% Similarity=0.093 Sum_probs=123.2
Q ss_pred eEEEEEccCCCCCC---------cHH----HHHHHHHh--CCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcC
Q 012311 160 YKFGIIGDLGQTYN---------SLS----TLEHYMES--GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQ 224 (466)
Q Consensus 160 ~~f~v~GD~g~~~~---------~~~----tl~~~~~~--~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~ 224 (466)
.+|+.++|+|.... ... +++++.+. +||+||++||++.... ...++.+.+.++.+ .+
T Consensus 1 M~i~hiSD~Hl~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~D~vv~~GDl~~~~~------~~~y~~~~~~l~~l--~~ 72 (271)
T d3d03a1 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGR------PEEYQVARQILGSL--NY 72 (271)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCC------HHHHHHHHHHHTTC--SS
T ss_pred CEEEEEecCcCCCCccccccCcCHHHHHHHHHHHHHhcCCCCCEEEECcccCcCCc------chhHHHHHHHHhcc--CC
Confidence 47999999996431 122 33444432 7999999999996321 33444455555443 68
Q ss_pred CeEEcCCCceeeccCcCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCCCC----CCChHHHHHHHHH
Q 012311 225 PWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPF----VKYTPQWEWLREE 300 (466)
Q Consensus 225 P~~~~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~~----~~~~~Q~~WL~~~ 300 (466)
|+++++||||.... .. ..+..+..... .......|+++.++++||+|||.... ....+|++||+++
T Consensus 73 p~~~i~GNHD~~~~--~~--~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~ldt~~~~~~~~~l~~~ql~wL~~~ 142 (271)
T d3d03a1 73 PLYLIPGNHDDKAL--FL--EYLQPLCPQLG------SDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQ 142 (271)
T ss_dssp CEEEECCTTSCHHH--HH--HHHGGGSGGGC------SCGGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHHHHH
T ss_pred CEEEEecCccchHH--HH--HHhhhhhhccc------cccCcceEEEecCCeEEEecccccCCCCcceecHHHHHHHHHH
Confidence 99999999997421 00 00111111111 11234678889999999999996532 2368999999999
Q ss_pred HhhccCCCCCeEEEEeccccccCCCccc-ccCHHHHHHHHHHHHHc-CCcEEEecccceecCCcccccCCCCCcEEEEeC
Q 012311 301 LKKVDREKTPWLIVLMHVPIYNSNEAHF-MEGESMRAAFESWFVRY-KVDYRISNLHYNISSGDCFPVPDKSAPVYITVG 378 (466)
Q Consensus 301 L~~~~r~~~~w~IV~~H~P~y~s~~~h~-~~~~~~r~~l~~ll~~y-~Vd~~~~gh~~~~~~~~~~~~~~~~g~vyiv~G 378 (466)
|++. ++ .++||++|||++....... .....-.++|..+|.+| +|+.+++||.|.-... .-+|+.++++.
T Consensus 143 L~~~--~~-~~~iv~~Hh~p~~~~~~~~d~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~------~~~g~~~~~~p 213 (271)
T d3d03a1 143 LFEG--GD-KPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMT------QYRQALISTLP 213 (271)
T ss_dssp HHHH--TT-SCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEE------EETTEEEEECC
T ss_pred Hhhh--cc-ceeEEEeccCccccCccccccccccchHHHHHHHHhcCCeEEEEeCCcchhhce------EECCEEEEEcC
Confidence 9984 33 4567888999887554211 11112246788899998 7999999999843221 22467766654
Q ss_pred CCC
Q 012311 379 DGG 381 (466)
Q Consensus 379 ~gG 381 (466)
+.+
T Consensus 214 st~ 216 (271)
T d3d03a1 214 GTV 216 (271)
T ss_dssp CSS
T ss_pred Cce
Confidence 443
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Probab=99.45 E-value=1.5e-13 Score=125.75 Aligned_cols=176 Identities=11% Similarity=0.062 Sum_probs=105.2
Q ss_pred CeEEEEEccCCCCCCcHHH-HHHHHHhCCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCceeec
Q 012311 159 SYKFGIIGDLGQTYNSLST-LEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEY 237 (466)
Q Consensus 159 ~~~f~v~GD~g~~~~~~~t-l~~~~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~~~ 237 (466)
+-+++++||.|......+. ++.+.+.++|+|+++||++..... ..++..+.+.+.. ..+|+++++||||...
T Consensus 5 ~~~i~~~sd~hg~~eale~~~~~~~~~~~D~vv~~GDl~~~~~~-----~~~~~~~~~~L~~--~~~pv~~i~GNHD~~~ 77 (228)
T d1uf3a_ 5 VRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPKAAK-----SRDYAAFFRILSE--AHLPTAYVPGPQDAPI 77 (228)
T ss_dssp CCEEEEEECCTTCHHHHHHHHTHHHHHTCSEEEEESCSSCTTCC-----HHHHHHHHHHHGG--GCSCEEEECCTTSCSH
T ss_pred ccEEEEEeCCCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCcc-----chHHHHhhhhhcc--ccceEEEEecCCCchh
Confidence 3468899999875433222 223334599999999999843221 2233333333332 2789999999999642
Q ss_pred cCcCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCCC----------CCCChHHHHHHHHHHhhccCC
Q 012311 238 MTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSP----------FVKYTPQWEWLREELKKVDRE 307 (466)
Q Consensus 238 ~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~----------~~~~~~Q~~WL~~~L~~~~r~ 307 (466)
..... ..+......+.. ......+.+..+++.++.++.... ......|..||++.|+..
T Consensus 78 ~~~~~-----~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--- 146 (228)
T d1uf3a_ 78 WEYLR-----EAANVELVHPEM---RNVHETFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWEL--- 146 (228)
T ss_dssp HHHHH-----HHHHHHHHCTTE---EECBTSEEEETTTEEEEEECSEEESSSCCBSSSSCEEEHHHHHHHHGGGGGS---
T ss_pred hhhhh-----hhcccccccccc---cccceeeeeccCCEEEEecCCccccCcCcchhhhhhhhHHHHHHHHHHHhhc---
Confidence 21000 000000000000 001123556778888888876321 012467899999998874
Q ss_pred CCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccce
Q 012311 308 KTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYN 357 (466)
Q Consensus 308 ~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~ 357 (466)
...+.|+++|+|++.....+. ..+ .+..+++++++++++|||.|.
T Consensus 147 ~~~~~il~~H~p~~~~~~~~~-~~~----~~~~~~~~~~~~lvl~GH~H~ 191 (228)
T d1uf3a_ 147 KDYPKIFLFHTMPYHKGLNEQ-GSH----EVAHLIKTHNPLLVLVAGKGQ 191 (228)
T ss_dssp CSCCEEEEESSCBCBTTTBTT-SBH----HHHHHHHHHCCSEEEECCSSC
T ss_pred cCCceEEEEeeeccCcccccc-ccH----HHHHHHHhcCCcEEEEccccc
Confidence 334568899999987554332 223 456678999999999999885
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Probab=99.41 E-value=3.9e-13 Score=124.91 Aligned_cols=187 Identities=11% Similarity=0.081 Sum_probs=105.5
Q ss_pred CeEEEEEccCCCCCCcHHHHH-HHHHhCCCEEEEcccccccccccccccc-------------------hhHHHHHHHHH
Q 012311 159 SYKFGIIGDLGQTYNSLSTLE-HYMESGAQTVLFLGDLSYADRYQFIDVG-------------------VRWDSWGRFVE 218 (466)
Q Consensus 159 ~~~f~v~GD~g~~~~~~~tl~-~~~~~~~dfvl~~GDl~Y~~~~~~~d~~-------------------~~wd~~~~~~~ 218 (466)
|.|+++++|.|........+. .+.+.+||+||++||++...... .+.+ ..-..+..+++
T Consensus 2 ~~ri~~isD~h~~~~~l~~l~~~~~~~~~D~vli~GDl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~n~d~~~~~~~~~ 80 (257)
T d2yvta1 2 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALE-KEYERAHLARREPNRKVIHENEHYIIETLDKFFR 80 (257)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCSEEEEESCCCCCHHHH-HHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHhhcCCCEEEEecccCCCCCCC-HHHHHHHHhhhhhceeeeccccccchhhHHHHHH
Confidence 579999999998776555444 34555999999999999632111 0000 00011223334
Q ss_pred HHh-hcCCeEEcCCCceeeccCcCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCCC---CC------
Q 012311 219 RSA-AYQPWIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSP---FV------ 288 (466)
Q Consensus 219 ~l~-~~~P~~~~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~---~~------ 288 (466)
.+. ..+|+++++||||....... ...+......+. .......+.+..+++.|+.+++... .+
T Consensus 81 ~L~~~~~pv~~i~GNHD~~~~~~~-----~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (257)
T d2yvta1 81 EIGELGVKTFVVPGKNDAPLKIFL-----RAAYEAETAYPN---IRVLHEGFAGWRGEFEVIGFGGLLTEHEFEEDFVLK 152 (257)
T ss_dssp HHHTTCSEEEEECCTTSCCHHHHH-----HHHHHTTTTCTT---EEECSSEEEEETTTEEEEEECSEEESSCCBSSSSCE
T ss_pred HHHhcCCcEEEEeCCCcchhhHHH-----HHhccccccccc---cccccceeEEecCCeEEEEeccccCCccccchhhhh
Confidence 443 36899999999996422100 011111111110 0011223445557788887776321 11
Q ss_pred CChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCcccc--cCHHHHHHHHHHHHHcCCcEEEecccce
Q 012311 289 KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFM--EGESMRAAFESWFVRYKVDYRISNLHYN 357 (466)
Q Consensus 289 ~~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~--~~~~~r~~l~~ll~~y~Vd~~~~gh~~~ 357 (466)
....+..|++..++. .+....|+++|+|++.+...... ........+..++++++++++++||.|.
T Consensus 153 ~~~~~~~~~~~~~~~---~~~~~~Il~~H~pp~~~~~~~~~~~~~~~g~~~l~~~l~~~~~~~~~~GHiH~ 220 (257)
T d2yvta1 153 YPRWYVEYILKFVNE---LKPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVGK 220 (257)
T ss_dssp EEHHHHHHHGGGGGG---SCCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSCC
T ss_pred hhhhHHHHHHHHhhh---cccccEEEEEccccccccccccccchhhhhhHHHHHhhhhcCCcEEEEEeecC
Confidence 123344555555555 34556899999999865432111 1111234677899999999999999884
|
| >d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Cryptosporidium parvum [TaxId: 5807]
Probab=98.82 E-value=2.8e-07 Score=82.42 Aligned_cols=184 Identities=14% Similarity=0.150 Sum_probs=106.9
Q ss_pred EEEEccCCCCCCcH---HHHHHHHH-hCCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCceeec
Q 012311 162 FGIIGDLGQTYNSL---STLEHYME-SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIEY 237 (466)
Q Consensus 162 f~v~GD~g~~~~~~---~tl~~~~~-~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~~~ 237 (466)
++++||+|...... ..+..+.+ .++|.|+++||++- . +..+.++.+ .-|++.+.||||...
T Consensus 6 IlviSD~H~~~~~~~l~~~~~~~~~~~~vD~ii~~GDi~~---------~----~~l~~l~~l--~~~v~~V~GN~D~~~ 70 (193)
T d2a22a1 6 VLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVCS---------Q----EYVEMLKNI--TKNVYIVSGDLDSAI 70 (193)
T ss_dssp EEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCCC---------H----HHHHHHHHH--CSCEEECCCTTCCSC
T ss_pred EEEEeCCCCCcccchhhHHHHHHhccCCCCEEEECCCCCC---------H----HHHHHHHhh--CCCEEEEcCCCCcch
Confidence 78999999754332 33445544 48999999999982 1 122333433 346889999999653
Q ss_pred cCcCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEEec
Q 012311 238 MTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLMH 317 (466)
Q Consensus 238 ~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~~~~~~~Q~~WL~~~L~~~~r~~~~w~IV~~H 317 (466)
... . ..+... . +..-.+..++. +|.+.|
T Consensus 71 ~~~---~---~~~~~~--l---------p~~~~~~~~~~-----------------------------------~i~l~H 98 (193)
T d2a22a1 71 FNP---D---PESNGV--F---------PEYVVVQIGEF-----------------------------------KIGLMH 98 (193)
T ss_dssp CBC---C---GGGTBC--C---------CSEEEEEETTE-----------------------------------EEEEEC
T ss_pred hhh---h---HHHHhh--C---------CccEEEEECCE-----------------------------------EEEEEe
Confidence 210 0 111111 1 23344444443 445555
Q ss_pred cccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccceecCCcccccCCCCCcEEEEeCCCCCCCCCCCCCCCCCCCc
Q 012311 318 VPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQPDY 397 (466)
Q Consensus 318 ~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~~~~~~~~~~~~~g~vyiv~G~gG~~~~~~~~~~~~~p~~ 397 (466)
...+.... + .+.+..++.+.++|.+++||.|.-.. ...++.++|-.|+-|.+... .-.+
T Consensus 99 ~~~~~~~~----~----~~~l~~~~~~~~~dvvi~GHTH~~~~------~~~~g~~~iNPGSvg~pr~~--~~~~----- 157 (193)
T d2a22a1 99 GNQVLPWD----D----PGSLEQWQRRLDCDILVTGHTHKLRV------FEKNGKLFLNPGTATGAFSA--LTPD----- 157 (193)
T ss_dssp STTSSSTT----C----HHHHHHHHHHHTCSEEEECSSCCCEE------EEETTEEEEECCCSSCCCCT--TSTT-----
T ss_pred ccCCCCCC----C----HHHHHHHHhhcCCCEEEEcCccCceE------EEECCEEEEECCCCCcCcCC--CCCC-----
Confidence 44332111 1 13566788899999999999984211 12357888888987754311 0011
Q ss_pred cceeeCcccEEEEEEecCCeEEEEEEEcCCCceeeeeeEEEEe
Q 012311 398 SAFREASYGHSTLEIKNRTHAFYHWNRNDDGKKVATDSFILHN 440 (466)
Q Consensus 398 sa~~~~~~G~~~l~v~n~t~l~~~~~~~~dg~~~~~D~~~i~k 440 (466)
....|++|++.+ ..+.++.++-.+|++ -++...+.|
T Consensus 158 -----~~~syaild~~~-~~v~v~~y~l~~~~~-~~~~~~~~~ 193 (193)
T d2a22a1 158 -----APPSFMLMALQG-NKVVLYVYDLRDGKT-NVAMSEFSK 193 (193)
T ss_dssp -----CCCEEEEEEEET-TEEEEEEEEEETTEE-EEEEEEEEC
T ss_pred -----CCCEEEEEEEEC-CEEEEEEEEecCCeE-EEEEEEEeC
Confidence 223699999964 458887776566664 455555543
|
| >d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.79 E-value=1.9e-07 Score=82.86 Aligned_cols=177 Identities=12% Similarity=0.069 Sum_probs=105.7
Q ss_pred eEEEEEccCCCCCCcH---HHHHHHHHh-CCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCcee
Q 012311 160 YKFGIIGDLGQTYNSL---STLEHYMES-GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEI 235 (466)
Q Consensus 160 ~~f~v~GD~g~~~~~~---~tl~~~~~~-~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~ 235 (466)
.++++++|+|...... ..+.++.+. ++|.|+|+||++- .+-.+.++.+ ..|++.+.||||.
T Consensus 1 MkI~viSD~H~~~~~~~l~~~~~~~~~~~~~D~Ii~~GDi~~-------------~e~l~~l~~~--~~~v~~V~GN~D~ 65 (182)
T d1z2wa1 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCT-------------KESYDYLKTL--AGDVHIVRGDFDE 65 (182)
T ss_dssp CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBS-------------HHHHHHHHHH--CSEEEECCCTTCC
T ss_pred CEEEEEeecCCCCcchhhHHHHHHHhcccCCCEEEEccCccc-------------hhhHHHHHhh--CCceEEEeCCcCc
Confidence 4799999999765432 234343333 7999999999982 1122334433 3478999999996
Q ss_pred eccCcCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEE
Q 012311 236 EYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVL 315 (466)
Q Consensus 236 ~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~~~~~~~Q~~WL~~~L~~~~r~~~~w~IV~ 315 (466)
... .| ..-.+..++ ++|.+
T Consensus 66 ~~~-----------------~p---------~~~~~~~~g-----------------------------------~~i~~ 84 (182)
T d1z2wa1 66 NLN-----------------YP---------EQKVVTVGQ-----------------------------------FKIGL 84 (182)
T ss_dssp CTT-----------------SC---------SEEEEEETT-----------------------------------EEEEE
T ss_pred ccc-----------------cc---------eEEEEEEcC-----------------------------------cEEEE
Confidence 421 11 111122222 34666
Q ss_pred eccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccceecCCcccccCCCCCcEEEEeCCCCCCCCCCCCCCCCCC
Q 012311 316 MHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQP 395 (466)
Q Consensus 316 ~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~~~~~~~~~~~~~g~vyiv~G~gG~~~~~~~~~~~~~p 395 (466)
.|.+.+.... . .+.+..++.+.++|.+++||.|--.- ...+++.+|-.|+.|.+.+- .-.++.
T Consensus 85 ~Hg~~~~~~~----~----~~~l~~~~~~~~~divi~GHTH~p~~------~~~~~~~~iNPGSv~~pr~~--~~~~~~- 147 (182)
T d1z2wa1 85 IHGHQVIPWG----D----MASLALLQRQFDVDILISGHTHKFEA------FEHENKFYINPGSATGAYNA--LETNII- 147 (182)
T ss_dssp ECSCCCCBTT----C----HHHHHHHHHHHSSSEEECCSSCCCEE------EEETTEEEEECCCTTCCCCS--SCSCCC-
T ss_pred EeCCCCCCCC----C----HHHHHHHHhccCCCEEEECCcCcceE------EEECCEEEEeCCCCCCCCCC--CCCCCC-
Confidence 7766543221 1 13456677888999999999984211 12357888888887654321 001122
Q ss_pred CccceeeCcccEEEEEEecCCeEEEEEEEcCCCceeeeeeEEEEe
Q 012311 396 DYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGKKVATDSFILHN 440 (466)
Q Consensus 396 ~~sa~~~~~~G~~~l~v~n~t~l~~~~~~~~dg~~~~~D~~~i~k 440 (466)
..|+++++.+ ..+++..++-+++++ ..++++.+|
T Consensus 148 ---------~syaild~~~-~~v~~~~~~l~~~~v-~~~~~~~~~ 181 (182)
T d1z2wa1 148 ---------PSFVLMDIQA-STVVTYVYQLIGDDV-KVERIEYKK 181 (182)
T ss_dssp ---------CEEEEEEEET-TEEEEEEEEEETTEE-EEEEEEEEC
T ss_pred ---------CEEEEEEEeC-CEEEEEEEEecCCcE-EEEEEEEEc
Confidence 3489999964 457766665455554 578777766
|
| >d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Uncharacterized protein SP1879 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.58 E-value=2.2e-06 Score=75.09 Aligned_cols=158 Identities=12% Similarity=0.057 Sum_probs=99.0
Q ss_pred CeEEEEEccCCCCCCcHHHHHHHHH---hCCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCcee
Q 012311 159 SYKFGIIGDLGQTYNSLSTLEHYME---SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEI 235 (466)
Q Consensus 159 ~~~f~v~GD~g~~~~~~~tl~~~~~---~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~ 235 (466)
..|+++++|+|.. ...++++.+ .++|.|+|+||+.+.... . ...|+.++.||||.
T Consensus 3 ~~kI~viSD~Hgn---~~al~~vl~~~~~~~D~iih~GD~~~~~~~------~-------------~~~~~~~V~GN~D~ 60 (173)
T d3ck2a1 3 KQTIIVMSDSHGD---SLIVEEVRDRYVGKVDAVFHNGDSELRPDS------P-------------LWEGIRVVKGNMDF 60 (173)
T ss_dssp CEEEEEECCCTTC---HHHHHHHHHHHTTTSSEEEECSCCCSCTTC------G-------------GGTTEEECCCTTCC
T ss_pred CCEEEEEeccCCC---HHHHHHHHHHhhcCCCEEEECCcccCcccc------h-------------hhcCCeEEecCccc
Confidence 4699999999953 334444332 379999999998864321 1 12478899999996
Q ss_pred eccCcCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEE
Q 012311 236 EYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVL 315 (466)
Q Consensus 236 ~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~~~~~~~Q~~WL~~~L~~~~r~~~~w~IV~ 315 (466)
... .| ..-.+..++ ++|.+
T Consensus 61 ~~~-----------------~~---------~~~~~~~~~-----------------------------------~~~~~ 79 (173)
T d3ck2a1 61 YAG-----------------YP---------ERLVTELGS-----------------------------------TKIIQ 79 (173)
T ss_dssp STT-----------------CC---------SEEEEEETT-----------------------------------EEEEE
T ss_pred ccc-----------------cc---------eEEEEEECC-----------------------------------EEEEE
Confidence 411 11 112233332 34566
Q ss_pred eccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccceecCCcccccCCCCCcEEEEeCCCCCCCCCCCCCCCCCC
Q 012311 316 MHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQEGLAGKFRYPQP 395 (466)
Q Consensus 316 ~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~~~~~~~~~~~~~g~vyiv~G~gG~~~~~~~~~~~~~p 395 (466)
.|...+.... .. ..+..++.+.++|.+++||.|.-.. ...+++.+|-.|+-|.+.+ ..+
T Consensus 80 ~Hg~~~~~~~----~~----~~l~~~~~~~~~dvvi~GHTH~p~~------~~~~~~~~iNPGSvg~pr~-----~~~-- 138 (173)
T d3ck2a1 80 THGHLFDINF----NF----QKLDYWAQEEEAAICLYGHLHVPSA------WLEGKILFLNPGSISQPRG-----TIR-- 138 (173)
T ss_dssp ECSGGGTTTT----CS----HHHHHHHHHTTCSEEECCSSCCEEE------EEETTEEEEEECCSSSCCT-----TCC--
T ss_pred EeCcCCCCCC----CH----HHHHHHHHhcCCCEEEeCCcCcceE------EEECCEEEEECCCCCCCCC-----CCC--
Confidence 6766655321 11 2455677888999999999984221 1235789999999886532 111
Q ss_pred CccceeeCcccEEEEEEecCCeEEEEEEEcCCCce
Q 012311 396 DYSAFREASYGHSTLEIKNRTHAFYHWNRNDDGKK 430 (466)
Q Consensus 396 ~~sa~~~~~~G~~~l~v~n~t~l~~~~~~~~dg~~ 430 (466)
...|+.+++.+ ..+.++++. -|++.
T Consensus 139 --------~~syail~~~~-~~~~v~~~~-~d~~~ 163 (173)
T d3ck2a1 139 --------ECLYARVEIDD-SYFKVDFLT-RDHEV 163 (173)
T ss_dssp --------SCCEEEEEECS-SEEEEEEEC-TTSCB
T ss_pred --------CCEEEEEEEeC-CEEEEEEEE-eCCeE
Confidence 12489999954 568888874 67764
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=98.56 E-value=1.6e-08 Score=92.95 Aligned_cols=190 Identities=9% Similarity=-0.011 Sum_probs=92.3
Q ss_pred eEEEEEccCCCCCCcH-HHHHHHHHh-----CCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCc
Q 012311 160 YKFGIIGDLGQTYNSL-STLEHYMES-----GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNH 233 (466)
Q Consensus 160 ~~f~v~GD~g~~~~~~-~tl~~~~~~-----~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNH 233 (466)
++++++||.|...... ..++.+.+. ++|.++++||++.. +. + -.+..+.+..+....++++++|||
T Consensus 1 v~I~visDiHg~~~~l~~~l~~i~~~~~~~~~~D~ii~~GDlvd~-G~-----~--~~evi~~l~~l~~~~~v~~v~GNH 72 (251)
T d1nnwa_ 1 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGL-FP-----Y--PKEVIEVIKDLTKKENVKIIRGKY 72 (251)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSS-SS-----C--HHHHHHHHHHHHHHSCEEEECCHH
T ss_pred CEEEEEEccccCHHHHHHHHHHHHHhhccCCCCcEEEEecCcCCC-CC-----C--cHHHHHHHHHHhhcCCEEEEeccH
Confidence 4799999999543222 223333321 56999999999942 21 1 134455666665567899999999
Q ss_pred eeeccCcCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCCCeEE
Q 012311 234 EIEYMTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLI 313 (466)
Q Consensus 234 E~~~~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~~~~~~~Q~~WL~~~L~~~~r~~~~w~I 313 (466)
|........... ......++.++. .+.. .++ ........++.+||+............-.+
T Consensus 73 D~~~~~~~~~~~-~~~~~~~~~~~~----------------~~~~-~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 133 (251)
T d1nnwa_ 73 DQIIAMSDPHAT-DPGYIDKLELPG----------------HVKK-ALK-FTWEKLGHEGREYLRDLPIYLVDKIGGNEV 133 (251)
T ss_dssp HHHHHHSCTTCS-SSGGGGGSSCCH----------------HHHH-HHH-HHHHHHHHHHHHHHHTSCSCEEEEETTEEE
T ss_pred HHHHHhcccccc-ccchhhhhccch----------------hHHH-hhH-HHhhhcCHHHHHHHHhcccceEEeeCCCcE
Confidence 964210000000 000000110000 0000 000 000001234556665433221111122357
Q ss_pred EEeccccccCCCcccccCHHHHHHHHHHHHH-cCCcEEEecccceecCCcccccCCCCCcEEEEeCCCCCC
Q 012311 314 VLMHVPIYNSNEAHFMEGESMRAAFESWFVR-YKVDYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQ 383 (466)
Q Consensus 314 V~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~-y~Vd~~~~gh~~~~~~~~~~~~~~~~g~vyiv~G~gG~~ 383 (466)
++.|.++.......... ......++..+.. .++|.+++||.|.-.. ...++..+|..|+-|-.
T Consensus 134 ~~~H~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~vv~GHtH~~~~------~~~~~~~~in~Gsvg~~ 197 (251)
T d1nnwa_ 134 FGVYGSPINPFDGEVLA-EQPTSYYEAIMRPVKDYEMLIVASPMYPVD------AMTRYGRVVCPGSVGFP 197 (251)
T ss_dssp EEESSCSSCTTTCCCCS-SCCHHHHHHHHGGGTTSSEEEESTTCSEEE------EEETTEEEEEECCSSSC
T ss_pred EEEecCccCcccchhhh-hhHHHHHhhhcccccCceEEEEeccceEEE------EEeeeeecccccccccc
Confidence 77888876644332111 1112223333333 3689999999874211 12356778888988765
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=98.42 E-value=1.9e-07 Score=88.93 Aligned_cols=73 Identities=18% Similarity=0.233 Sum_probs=48.3
Q ss_pred eEEEEEccCCCCCCc----------HHHHHHH----HHhCCCEEEEcccccccccccccccchhHHHHHHHHHHHh-hcC
Q 012311 160 YKFGIIGDLGQTYNS----------LSTLEHY----MESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSA-AYQ 224 (466)
Q Consensus 160 ~~f~v~GD~g~~~~~----------~~tl~~~----~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~-~~~ 224 (466)
.||+.++|+|.+... ...++++ .+.++|+||++||++.... .. ......+.+.+..+. ..+
T Consensus 1 Mkilh~SDlHlG~~~~~~~~~~~~~~~~l~~iv~~a~~~~~D~vli~GDlfd~~~-~~---~~~~~~~~~~~~~l~~~~i 76 (333)
T d1ii7a_ 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSR-PS---PGTLKKAIALLQIPKEHSI 76 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSS-CC---HHHHHHHHHHHHHHHTTTC
T ss_pred CEEEEEecCcCCCCCcCchhHHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCC-CC---HHHHHHHHHHHhhHHhcCC
Confidence 489999999976431 1233333 3459999999999985321 11 122334455566554 369
Q ss_pred CeEEcCCCceee
Q 012311 225 PWIWSAGNHEIE 236 (466)
Q Consensus 225 P~~~~~GNHE~~ 236 (466)
|++.++||||..
T Consensus 77 ~v~~i~GNHD~~ 88 (333)
T d1ii7a_ 77 PVFAIEGNHDRT 88 (333)
T ss_dssp CEEEECCTTTCC
T ss_pred cEEEeCCCCccc
Confidence 999999999975
|
| >d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Putative phosphodiesterase MJ0936 species: Methanococcus jannaschii [TaxId: 2190]
Probab=98.35 E-value=8.6e-07 Score=76.87 Aligned_cols=141 Identities=14% Similarity=0.102 Sum_probs=81.9
Q ss_pred eEEEEEccCCCCCCcH-HHHHHHHHhCCCEEEEcccccccccccccccchhHHHHHHHHHHHh-hcCCeEEcCCCceeec
Q 012311 160 YKFGIIGDLGQTYNSL-STLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSA-AYQPWIWSAGNHEIEY 237 (466)
Q Consensus 160 ~~f~v~GD~g~~~~~~-~tl~~~~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~-~~~P~~~~~GNHE~~~ 237 (466)
.|+++++|+|...... ..++.+.+.++|.|+++||++.. . .++.+. ...|++.+.||||...
T Consensus 1 MkI~iiSDiHgn~~al~~vl~~~~~~~~D~ii~~GD~~~~---------~-------~~~~l~~~~~~~~~v~GN~D~~~ 64 (165)
T d1s3la_ 1 MKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSL---------F-------VIKEFENLNANIIATYGNNDGER 64 (165)
T ss_dssp CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCST---------H-------HHHHGGGCSSEEEEECCTTCCCH
T ss_pred CEEEEEEeCCCCHHHHHHHHHHHHhcCCCEEEECCCccCH---------H-------HHHHHhhcCccEEEEcccccccc
Confidence 4899999999643332 33444555699999999999831 1 112222 3568999999999753
Q ss_pred cCcCCcccccccccccccCCCCCCCCCCCceEEEeeCCEEEEEEcCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEEec
Q 012311 238 MTYMGEVVPFKSYLHRYPTPHLASKSSSPLWYAIRRASAHIIVLSSYSPFVKYTPQWEWLREELKKVDREKTPWLIVLMH 317 (466)
Q Consensus 238 ~~~~~~~~~f~~y~~rf~~P~~~~~~~~~~yYsf~~g~v~fI~Lds~~~~~~~~~Q~~WL~~~L~~~~r~~~~w~IV~~H 317 (466)
.... ............| ....+.+++ ++|.+.|
T Consensus 65 ~~~~---~~~~~~~~~~~~~---------~~~~~~~~~-----------------------------------~~i~l~H 97 (165)
T d1s3la_ 65 CKLK---EWLKDINEENIID---------DFISVEIDD-----------------------------------LKFFITH 97 (165)
T ss_dssp HHHH---HHHHHHCTTCEEE---------SEEEEEETT-----------------------------------EEEEEEE
T ss_pred hhhh---HhhhhhcccccCC---------hhhceEECC-----------------------------------cEEEEEE
Confidence 2100 0000000000011 122222221 2577788
Q ss_pred cccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccceecCCcccccCCCCCcEEEEeCCCCCC
Q 012311 318 VPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYNISSGDCFPVPDKSAPVYITVGDGGNQ 383 (466)
Q Consensus 318 ~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~~~~~~~~~~~~~g~vyiv~G~gG~~ 383 (466)
.+++. .++.++.+.++|.+++||.|.-.. ...+++++|-.|+-|.+
T Consensus 98 g~~~~--------------~~~~~~~~~~~d~v~~GHtH~~~~------~~~~~~~~iNPGSvg~p 143 (165)
T d1s3la_ 98 GHHQS--------------VLEMAIKSGLYDVVIYGHTHERVF------EEVDDVLVINPGECCGY 143 (165)
T ss_dssp SCCHH--------------HHHHHHHHSCCSEEEEECSSCCEE------EEETTEEEEECCCSSCT
T ss_pred CCccc--------------HHHHHhhcCCCCEEEECCcCcceE------EEECCEEEEECCCCCCC
Confidence 65432 345678889999999999984211 12357888888887654
|
| >d1x4xa1 b.1.2.1 (A:8-100) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.94 E-value=1.6e-05 Score=61.40 Aligned_cols=70 Identities=21% Similarity=0.389 Sum_probs=47.1
Q ss_pred CCcEEEEEEcCCCCCC----cEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEEEecc------C
Q 012311 71 GKAVIISWVTPHEPGP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGS------G 140 (466)
Q Consensus 71 ~~~~~V~W~t~~~~~~----~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Yrv~~------~ 140 (466)
.+++.|+|..+...+. -.|+|....+.......+. ...++|++|+|+|.|.+||.. +
T Consensus 14 ~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-------------~~~~~i~~L~p~t~Y~~~V~A~n~~G~s 80 (93)
T d1x4xa1 14 ATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSMQICYCGP-------------GLSYEIKGLSPATTYYCRVQALSVVGAG 80 (93)
T ss_dssp TTEEEEECCCCSCSSSCCCEEEEEEESSTTSCCEEEEES-------------CSEEEEESCCSSCEEEEEEEEECSSCCC
T ss_pred CCeEEEEEEecccCCCeeEEEEEEEccCCCcceEeecCC-------------ccEEEEcccceeeEEEEEEEEEECCcCc
Confidence 4799999986543332 3577766655443322221 123578999999999999954 2
Q ss_pred CccceEEEECCCC
Q 012311 141 DSSREFWFQTPPK 153 (466)
Q Consensus 141 ~~s~~~~F~T~p~ 153 (466)
.+|+...|+|+|+
T Consensus 81 ~~S~~~~~~Tpps 93 (93)
T d1x4xa1 81 PFSEVVACVTPPS 93 (93)
T ss_dssp CBCCCEEEECCCC
T ss_pred CCCCcEEEEeCCC
Confidence 5688889999874
|
| >d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Hypothetical protein aq 1666 domain: Hypothetical protein aq 1666 species: Aquifex aeolicus [TaxId: 63363]
Probab=97.93 E-value=9.6e-05 Score=65.12 Aligned_cols=43 Identities=14% Similarity=0.102 Sum_probs=33.7
Q ss_pred EEEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccce
Q 012311 312 LIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYN 357 (466)
Q Consensus 312 ~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~ 357 (466)
+|++.|.|+...... ........+..++.+++++..++||.|.
T Consensus 108 ~i~l~H~P~~~~~~~---~~~~~~~~~~~~~~~~~~~~~lhGH~H~ 150 (188)
T d1xm7a_ 108 RILLSHYPAKDPITE---RYPDRQEMVREIYFKENCDLLIHGHVHW 150 (188)
T ss_dssp EEEEESSCSSCSSCC---SCHHHHHHHHHHHHHTTCSEEEECCCCC
T ss_pred EEEEEeCCCcccccc---ccccchhHHHHHHHhcCceEEEEeeccC
Confidence 689999999654432 2334566788999999999999999884
|
| >d1x5aa1 b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.86 E-value=2.4e-05 Score=60.85 Aligned_cols=80 Identities=15% Similarity=0.258 Sum_probs=50.8
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCC-CCCc----EEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHE-PGPS----TVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~-~~~~----~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T 131 (466)
.+|..+++.-.. .+++.|+|.-+.. .... .|+|....+.. ... . . -..++|+||+|+|
T Consensus 4 ~~p~~L~~~~~~--~~si~vsW~~p~~~~~~~~i~Y~i~~~~~~~~~--~~~----~-------~--~t~~~i~~L~p~t 66 (94)
T d1x5aa1 4 LSGLSLKLVKKE--PRQLELTWAGSRPRNPGGNLSYELHVLNQDEEW--HQM----V-------L--EPRVLLTKLQPDT 66 (94)
T ss_dssp CCSCCCCEEEEE--TTEEEEECCCCCSSCCSSCCEEEEEEECSSCEE--EEE----E-------S--SSEEEEESCCSSC
T ss_pred CCCCceEEEEcC--CCEEEEEEecccCCCCCcEEEEEEEEecCCceE--EEe----e-------c--cCEEEECCCCCCC
Confidence 357777776554 5899999986532 2222 34444433211 100 0 0 1246899999999
Q ss_pred EEEEEecc------CCccceEEEECCCC
Q 012311 132 KYYYKIGS------GDSSREFWFQTPPK 153 (466)
Q Consensus 132 ~Y~Yrv~~------~~~s~~~~F~T~p~ 153 (466)
.|.+||.. +.+|+...|+|.|+
T Consensus 67 ~Y~~rV~A~n~~G~g~~S~~~~~~T~PP 94 (94)
T d1x5aa1 67 TYIVRVRTLTPLGPGPFSPDHEFRTSPP 94 (94)
T ss_dssp EEEEEEEEECSSSCCCCCCCEEEECCCC
T ss_pred EEEEEEEEEcCCcCcCCCCCEEEEeCCC
Confidence 99999954 35788999999874
|
| >d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.81 E-value=3.3e-05 Score=59.44 Aligned_cols=82 Identities=18% Similarity=0.222 Sum_probs=50.0
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCCCC-----cEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEPGP-----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~~~-----~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~ 132 (466)
+|..+.+.... .+++.|+|.-+...+. -.++|....+.......... ....++|+||+|+|.
T Consensus 3 ~P~~~~v~~~~--~~si~l~W~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~-----------~~~~~~v~~L~p~t~ 69 (96)
T d1x5xa1 3 MPASPVLTKAG--ITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYDG-----------EDLAYTVKNLRRSTK 69 (96)
T ss_dssp CCCCCEEEEEC--SSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCEEEEEE-----------SCSEEEEESCCSSCE
T ss_pred cCCCCEEEEec--CCEEEEEEEeecccCcceEeeeEEEeeeccceeeeEEeecC-----------CCCEEEECCCCCCCE
Confidence 45566665443 5799999987543221 24444444433322221110 112368899999999
Q ss_pred EEEEeccC------CccceEEEECCC
Q 012311 133 YYYKIGSG------DSSREFWFQTPP 152 (466)
Q Consensus 133 Y~Yrv~~~------~~s~~~~F~T~p 152 (466)
|.+||..- .+|+...|+|.|
T Consensus 70 Y~~rV~A~n~~G~s~~S~~~~~~T~p 95 (96)
T d1x5xa1 70 YKFKVIAYNSEGKSNPSEVVEFTTCP 95 (96)
T ss_dssp EEEEEEEECSSCEEEECCCEEEECCC
T ss_pred EEEEEEEEcCCcEeCCCCCEEEEeCc
Confidence 99999642 367888999987
|
| >d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.70 E-value=4.5e-05 Score=60.26 Aligned_cols=88 Identities=25% Similarity=0.437 Sum_probs=55.3
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCCC----cEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPGP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~~----~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~ 132 (466)
.+|..+.+...+...+++.|+|.-+...+. -.|.|....+...... .... ..+-.+.++|+||+|+|.
T Consensus 13 ~pP~~~~v~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~~--~~~~------~~~~~~~~~i~~L~p~t~ 84 (111)
T d1x5ka1 13 SPPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDW--VIEP------VVGNRLTHQIQELTLDTP 84 (111)
T ss_dssp SCCEEEEEEECSSCTTCEEEEEECCSCCSSCCCEEEEEEESCSSSCTTTS--EEEE------ESTTCSEEEECSCCSSSE
T ss_pred CCCCCcEEEEecCCCCEEEEEEEccccCCCceeeeEEeeeecCCCCccee--EEEE------eCCCeeEEEECCCCCCCE
Confidence 458888887654456799999987643322 2556655443221100 0001 112223467999999999
Q ss_pred EEEEecc------CCccceEEEECCC
Q 012311 133 YYYKIGS------GDSSREFWFQTPP 152 (466)
Q Consensus 133 Y~Yrv~~------~~~s~~~~F~T~p 152 (466)
|.+||.. +.+|+...|+|+.
T Consensus 85 Y~~~V~A~n~~G~g~~S~~v~~~T~~ 110 (111)
T d1x5ka1 85 YYFKIQARNSKGMGPMSEAVQFRTPK 110 (111)
T ss_dssp EEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEEEEEcCCCCcCCCCCEEEECCC
Confidence 9999964 3578888999975
|
| >d1usha2 d.159.1.2 (A:26-362) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=97.68 E-value=0.00011 Score=70.67 Aligned_cols=185 Identities=15% Similarity=0.120 Sum_probs=92.9
Q ss_pred CCeEEEEEccCCCCCC-------cH----HHHHHHHH----hCCC-EEEEcccccccccccccccchhHHHHHHHHHHHh
Q 012311 158 ASYKFGIIGDLGQTYN-------SL----STLEHYME----SGAQ-TVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSA 221 (466)
Q Consensus 158 ~~~~f~v~GD~g~~~~-------~~----~tl~~~~~----~~~d-fvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~ 221 (466)
..++++.++|+|.... .. ..++++.+ .+++ ++|.+||++...... . ...+....+.|..+
T Consensus 7 ~~ltILhtnD~Hg~l~~~~~~~~g~a~~~~~i~~~r~~~~~~~~~~l~ldaGD~~~gs~~s--~-~~~g~~~~~~mn~~- 82 (337)
T d1usha2 7 YKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPES--D-LQDAEPDFRGMNLV- 82 (337)
T ss_dssp EEEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCSSSCHHH--H-TTTTHHHHHHHHHH-
T ss_pred eEEEEEEEeecccCCcCCCCCCcCHHHHHHHHHHHHHHHHhcCCCEEEEECCCCcccCHHH--H-HhCChHHHHHHHhc-
Confidence 3688999999985321 11 12333332 3555 566799998532211 1 11122223334333
Q ss_pred hcCCe-EEcCCCceeeccCcCCcccccccccccccCCCCC-------CC-CCCCceEEEeeCCEE--EEEEcCCC-----
Q 012311 222 AYQPW-IWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLA-------SK-SSSPLWYAIRRASAH--IIVLSSYS----- 285 (466)
Q Consensus 222 ~~~P~-~~~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~~~-------~~-~~~~~yYsf~~g~v~--fI~Lds~~----- 285 (466)
++ ..++||||+++... .+..+......|.-. .+ .....|.-++.++++ ||.+-+..
T Consensus 83 ---g~Da~~~GNHEfd~G~~-----~l~~~~~~~~~p~l~aN~~~~~~~~~~~~py~I~~~~g~kVgviG~~~~~~~~~~ 154 (337)
T d1usha2 83 ---GYDAMAIGNHEFDNPLT-----VLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIG 154 (337)
T ss_dssp ---TCCEEECCGGGGSSCHH-----HHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSS
T ss_pred ---CCeEEEechhhhccchH-----HHHHHHHhcCceEeeccccccccccccccceeeeecCCeEEEeeccccccccccc
Confidence 32 57789999975321 111122222222100 00 112356667888865 46664321
Q ss_pred --CC-C-----CChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccce
Q 012311 286 --PF-V-----KYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYN 357 (466)
Q Consensus 286 --~~-~-----~~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~ 357 (466)
.. . ...+..+-..++|++. .+...+|++.|.+.......-. ... ....+...+...+||+++.||.|.
T Consensus 155 ~~~~~~~~~~~d~~~~~~~~~~~l~~~--~~~D~iI~lsH~G~~~d~~~~~-~~~-~~~~la~~~~~~~vD~IvgGHsH~ 230 (337)
T d1usha2 155 NPEYFTDIEFRKPADEAKLVIQELQQT--EKPDIIIAATHMGHYDNGEHGS-NAP-GDVEMARALPAGSLAMIVGGHSQD 230 (337)
T ss_dssp SCCCCTTEEECCHHHHHHHHHHHHHHH--TCCSEEEEEEESCCCGGGCCTT-SCC-CHHHHHHHSCTTSSSEEECCSSCC
T ss_pred CcccccCcccccHHHHHHHHHHHHhhc--cCCCEEEEecccCccccccccc-ccc-hhHHHHHhCcccCceEEecCccCc
Confidence 00 0 1123333334455542 4677899999998765332110 011 112344455556999999999986
Q ss_pred e
Q 012311 358 I 358 (466)
Q Consensus 358 ~ 358 (466)
.
T Consensus 231 ~ 231 (337)
T d1usha2 231 P 231 (337)
T ss_dssp B
T ss_pred c
Confidence 4
|
| >d1qg3a1 b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.67 E-value=0.00016 Score=55.16 Aligned_cols=82 Identities=16% Similarity=0.155 Sum_probs=55.2
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCC-CCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYY 135 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~-~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Y 135 (466)
.+|+.+.+.... .+++.|+|.-+... ..-.|+|............. ......+.|++|+|+|.|.+
T Consensus 3 ~aP~n~~~~~~s--~~si~l~W~~p~~~~~~Y~i~y~~~~~~~~~~~~~-----------~~~~~~~~i~~L~p~t~Y~~ 69 (92)
T d1qg3a1 3 GAPQNPNAKAAG--SRKIHFNWLPPSGKPMGYRVKYWIQGDSESEAHLL-----------DSKVPSVELTNLYPYCDYEM 69 (92)
T ss_dssp CCCEEEEEEECS--TTCEEEEEECCSSCCCEEEEEEEETTSCGGGCEEE-----------EESSSEEEECSCCTTCEEEE
T ss_pred CcCCCCEEEEcc--CCEEEEEEEecCCCccceEEeeeeccccccEEEEe-----------cCCccEEEECCCCCCcEEEE
Confidence 368888887653 58999999876432 23468887765543222111 11223578999999999999
Q ss_pred Eecc------CCccceEEEECC
Q 012311 136 KIGS------GDSSREFWFQTP 151 (466)
Q Consensus 136 rv~~------~~~s~~~~F~T~ 151 (466)
||.. +.+|+...|+|+
T Consensus 70 ~V~A~n~~G~g~~S~~~~~~T~ 91 (92)
T d1qg3a1 70 KVCAYGAQGEGPYSSLVSCRTH 91 (92)
T ss_dssp EEEEECSSCBCCCCCCEEEECC
T ss_pred EEEEEeCCcCcCCCCCEEEEcC
Confidence 9964 246777888885
|
| >d2crza1 b.1.2.1 (A:8-104) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.61 E-value=9.5e-05 Score=57.59 Aligned_cols=70 Identities=19% Similarity=0.255 Sum_probs=46.0
Q ss_pred CCcEEEEEEcCCCCC-----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEEEecc------
Q 012311 71 GKAVIISWVTPHEPG-----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGS------ 139 (466)
Q Consensus 71 ~~~~~V~W~t~~~~~-----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Yrv~~------ 139 (466)
.+++.|+|.-+...+ .-.|+|.......+..+. . . ....++|++|+|+|.|.+||..
T Consensus 16 ~~sv~l~W~~P~~~gg~~i~~Y~v~~~~~~~~~~~~~~------~----~--~~~~~~v~~L~p~t~Y~frV~A~N~~G~ 83 (97)
T d2crza1 16 AKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVY------Q----G--SEVECTVSSLLPGKTYSFRLRAANKMGF 83 (97)
T ss_dssp SSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEEE------E----E--SCSEEEEESCCTTCEEEECCEEECSSCB
T ss_pred CCEEEEEEeCCCcCCCCceeEEEEEEEcCcCCceeEee------c----C--CceEEEEcCCCCCEEEEEEEEEecCCeE
Confidence 578999998653222 246777665544433221 1 0 1123689999999999999964
Q ss_pred CCccceEEEECCC
Q 012311 140 GDSSREFWFQTPP 152 (466)
Q Consensus 140 ~~~s~~~~F~T~p 152 (466)
+.+|+...++|+|
T Consensus 84 s~~S~~~~~~T~p 96 (97)
T d2crza1 84 GPFSEKCDITTAP 96 (97)
T ss_dssp CCCCCCEEEECCC
T ss_pred cCCcCCCeEEeCc
Confidence 2467888899976
|
| >d2haza1 b.1.2.1 (A:489-589) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.60 E-value=8.8e-05 Score=58.00 Aligned_cols=85 Identities=15% Similarity=0.225 Sum_probs=52.5
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCCC-C----cEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEPG-P----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~~-~----~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~ 132 (466)
+|....+... .+++.|+|.-+...+ . -.|+|....+........... ....-..++|+||+|+|.
T Consensus 5 ~P~~~~~~~~---~~sv~l~W~~P~~~gg~~I~~Y~v~~~~~~~~~~~~~~~~~~-------~~~~~~~~~i~~L~p~t~ 74 (101)
T d2haza1 5 SPSIDQVEPY---SSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAK-------EASMEGIVTIVGLKPETT 74 (101)
T ss_dssp CCEEEEEEEC---SSCEEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEEEEEHH-------HHHHHSEEEECSCCTTCE
T ss_pred CCccCEEEee---CCEEEEEEeCCCcCccccEEEEEEEEeecCCcceeeeeeeee-------cccceeEEEecCCCCCeE
Confidence 5754444333 468999999864332 2 357777665543322211100 011122478999999999
Q ss_pred EEEEecc------CCccceEEEECCC
Q 012311 133 YYYKIGS------GDSSREFWFQTPP 152 (466)
Q Consensus 133 Y~Yrv~~------~~~s~~~~F~T~p 152 (466)
|.+||.. +.+|+...|+|.|
T Consensus 75 Y~frV~A~N~~G~g~~S~~~~~~T~P 100 (101)
T d2haza1 75 YAVRLAALNGKGLGEISAASEFKTQP 100 (101)
T ss_dssp EEEEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEEEEEEeCCcCcCCCCceeEEeCC
Confidence 9999964 3578888999987
|
| >d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.54 E-value=0.00023 Score=56.16 Aligned_cols=84 Identities=18% Similarity=0.247 Sum_probs=54.6
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCC-C----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEP-G----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~-~----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T 131 (466)
.+|+.+.+.... .+++.|+|.-+... + .-.|.|....+..+..... .......++|++|+|+|
T Consensus 12 ~~P~~l~~~~~~--~~sv~lsW~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~~~----------~~~~~~~~~~~~L~p~t 79 (107)
T d1x5fa1 12 SAPRDVVASLVS--TRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVENT----------SHPGEMQVTIQNLMPAT 79 (107)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEEEEC----------SSTTCSEEEECSCCTTC
T ss_pred cCCCccEEEEec--CCEEEEEEECCccCCCCceEEEEEEEEeCCCCceEEEEE----------eCCCccEEEecCCCCCC
Confidence 468888877654 57999999865322 1 2366676655433322111 12233568999999999
Q ss_pred EEEEEeccC------CccceEEEECCC
Q 012311 132 KYYYKIGSG------DSSREFWFQTPP 152 (466)
Q Consensus 132 ~Y~Yrv~~~------~~s~~~~F~T~p 152 (466)
+|.+||..- .+|....++|.|
T Consensus 80 ~Y~~rV~A~n~~G~g~~S~~i~v~T~~ 106 (107)
T d1x5fa1 80 VYIFRVMAQNKHGSGESSAPLRVETQP 106 (107)
T ss_dssp EEEEEEEEECSSCEEEECCCEEEECCC
T ss_pred EEEEEEEEEeCCCCcCCCCCEEEECCC
Confidence 999999652 246777888876
|
| >d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.52 E-value=0.00018 Score=56.21 Aligned_cols=79 Identities=15% Similarity=0.291 Sum_probs=51.1
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCCC----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~~----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y 133 (466)
+|..+.+.... .+++.|+|..+...+ .-.|+|...+......+... ...++|+||+|+|.|
T Consensus 13 ~P~~l~v~~~s--~~si~l~W~~P~~~~g~i~~Y~v~~~~~~~~~~~~~~~~-------------~~~~~i~~L~p~t~Y 77 (103)
T d1x5ga1 13 PAPNLRAYAAS--PTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQDVDVS-------------SHSYTINGLKKYTEY 77 (103)
T ss_dssp CCSSCEEEEEE--TTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCCCEEEC-------------SSEEEECSCCTTCEE
T ss_pred cCCCcEEEEcc--CCEEEEEEECCcCCCccEEEEEEEEEeCCCceeEEEecc-------------ccEEecCCCCCCCEE
Confidence 57777776553 479999998654332 23577776655433322211 123679999999999
Q ss_pred EEEecc------CCccceEEEECC
Q 012311 134 YYKIGS------GDSSREFWFQTP 151 (466)
Q Consensus 134 ~Yrv~~------~~~s~~~~F~T~ 151 (466)
.+||.. +.+|+...++|+
T Consensus 78 ~~~V~A~n~~G~g~~S~~v~v~T~ 101 (103)
T d1x5ga1 78 SFRVVAYNKHGPGVSTPDVAVRTL 101 (103)
T ss_dssp EEEEEEECSSCCCCBCCCCCEECC
T ss_pred EEEEEEEcCCcCcCCCCCEEEEcC
Confidence 999954 235666777775
|
| >d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-B receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.52 E-value=0.00015 Score=55.56 Aligned_cols=81 Identities=17% Similarity=0.268 Sum_probs=50.4
Q ss_pred CceEEEeeecCCCCcEEEEEEcCCCCCCcE----EEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEE
Q 012311 59 PQQVHITQGDYDGKAVIISWVTPHEPGPST----VSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYY 134 (466)
Q Consensus 59 P~qv~lt~~~~~~~~~~V~W~t~~~~~~~~----V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~ 134 (466)
|..+++.... .+++.|+|.-+...+... |+|.............. .....++|++|+|+|.|.
T Consensus 4 ~~~l~~~~~t--~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~-----------~~~~~~~i~~L~p~t~Y~ 70 (95)
T d2djsa1 4 VPIMHQVSAT--MRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSMAR-----------SQTNTARIDGLRPGMVYV 70 (95)
T ss_dssp CSCCEEEEEC--SSEEEEECCCCSCCSSCEEEEEEEEEETTSCSTTCEEEE-----------ESSSEEEEESCCTTCEEE
T ss_pred CCccEEEeec--CCEEEEEEEECCCCCcceEEeeeeeeeeccCcceeEeec-----------CCccEEEEeecCCccEEE
Confidence 4456665443 579999998765443333 44554443222111100 012347899999999999
Q ss_pred EEeccC------CccceEEEECCC
Q 012311 135 YKIGSG------DSSREFWFQTPP 152 (466)
Q Consensus 135 Yrv~~~------~~s~~~~F~T~p 152 (466)
+||..- .+|+...|+|+|
T Consensus 71 ~~V~A~n~~G~g~~S~~~~~~T~~ 94 (95)
T d2djsa1 71 VQVRARTVAGYGKFSGKMCFQTLT 94 (95)
T ss_dssp EEEEEEESSCEEEECCCEEEECCC
T ss_pred EEEEEEcCCCCCCCCCCEEEEeCC
Confidence 999652 367888999987
|
| >d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 8 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.48 E-value=0.00023 Score=55.19 Aligned_cols=81 Identities=16% Similarity=0.321 Sum_probs=53.7
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCCC----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~~----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y 133 (466)
.|..+++...+ .+++.|+|..+.... .-.|+|....+....... . ....+..+|+||+|+|.|
T Consensus 6 ~p~~~~~~~~s--~~si~v~W~~P~~~~g~i~~Y~v~y~~~~~~~~~~~~-----~------~~~~~~~~i~~L~p~t~Y 72 (98)
T d1x5la1 6 QVVVIRQERAG--QTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYST-----L------KAVTTRATVSGLKPGTRY 72 (98)
T ss_dssp CCCCEECSCBC--SSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSSCEE-----E------EESSSEEEECSCCTTCEE
T ss_pred CCCceEEEecc--CCEEEEEEECCCCCCCCEEEEEEEeecccccceeeEE-----e------cCCceEEEECCCCCCCEE
Confidence 47777766554 689999998765432 235778766543322211 0 111235689999999999
Q ss_pred EEEecc------CCccceEEEECC
Q 012311 134 YYKIGS------GDSSREFWFQTP 151 (466)
Q Consensus 134 ~Yrv~~------~~~s~~~~F~T~ 151 (466)
.+||.. +.+|+...|+|.
T Consensus 73 ~~~V~a~n~~G~g~~S~~v~~~T~ 96 (98)
T d1x5la1 73 VFQVRARTSAGCGRFSQAMEVETG 96 (98)
T ss_dssp EECEEEEETTEECCCCCCEEEECC
T ss_pred EEEEEEEcCCCCcCCCCCEEEEcC
Confidence 999954 357888899985
|
| >d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.46 E-value=0.0008 Score=50.82 Aligned_cols=72 Identities=15% Similarity=0.179 Sum_probs=48.7
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCC-CCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEEE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~-~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Yr 136 (466)
+|+++.++.-. .+++.|+|..+... ..-.|+|....+......... ....-...++|+||+|+|.|.++
T Consensus 3 aP~~l~v~~~~--~~sv~v~W~~p~~~~~~y~v~y~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~p~t~Y~~~ 72 (92)
T d1tdqa2 3 APKNLRVGSRT--ATSLDLEWDNSEAEAQEYKVVYSTLAGEQYHEVLVP--------KGIGPTTKTTLTDLVPGTEYGVG 72 (92)
T ss_dssp CCEEEEEEEEC--SSCEEEEEECCSSCCSEEEEEEEETTCCCCEEEEEE--------CCSSSEEEEEECSCCTTCEEEEE
T ss_pred cCcCCEEEEec--CCEEEEEEEecCCcccceEEEEEEcCCCcceeeEEE--------ecCCCeeEEEECCccCCCEEEEE
Confidence 58888887653 57999999876533 345688887664332222111 12334556899999999999999
Q ss_pred ecc
Q 012311 137 IGS 139 (466)
Q Consensus 137 v~~ 139 (466)
|..
T Consensus 73 V~a 75 (92)
T d1tdqa2 73 ISA 75 (92)
T ss_dssp EEE
T ss_pred EEE
Confidence 965
|
| >d2b5ib2 b.1.2.1 (B:104-207) Interleukin-2 receptor beta chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-2 receptor beta chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.45 E-value=0.00023 Score=55.25 Aligned_cols=85 Identities=15% Similarity=0.202 Sum_probs=54.2
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC------CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG------PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYD 130 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~------~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~ 130 (466)
.+|..+++..-. .+++.|+|..+.... .-.|+|....+.... .. ... ....-..+.|+||+|+
T Consensus 4 ~pP~~l~v~~~~--~~s~~l~W~~p~~~~~~~~~~~~~v~~~~~~~~~~~-~~--~~~------~~~~~~~~~i~~L~p~ 72 (104)
T d2b5ib2 4 MAPISLQVVHVE--THRCNISWEISQASHYFERHLEFEARTLSPGHTWEE-AP--LLT------LKQKQEWICLETLTPD 72 (104)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSCCGGGTTCEEEEEEEECTTSCSTT-SC--CEE------ECSCCCEEEECSCCTT
T ss_pred CCCCCcEEEEEe--CCEEEEEEccccccccccceeEEEEEEeccccccee-ee--EEe------cCCCcEEEEECCCCCC
Confidence 469999988764 579999998874321 124666655442211 00 000 1112334688999999
Q ss_pred CEEEEEecc-------C---CccceEEEECCC
Q 012311 131 TKYYYKIGS-------G---DSSREFWFQTPP 152 (466)
Q Consensus 131 T~Y~Yrv~~-------~---~~s~~~~F~T~p 152 (466)
|.|.+||.. + .||+...|+|.|
T Consensus 73 t~Y~~rVra~~~~g~~g~wS~wS~~v~~~T~P 104 (104)
T d2b5ib2 73 TQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKP 104 (104)
T ss_dssp CEEEEEEEEEESCCSSCCCCCCCCCEEEECCC
T ss_pred CEEEEEEEEEECCCCCCCCCCCcCCEEEECCC
Confidence 999999964 1 357778999987
|
| >d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.45 E-value=0.00041 Score=53.04 Aligned_cols=81 Identities=15% Similarity=0.300 Sum_probs=51.2
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCCCC----cEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEPGP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~~~----~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y 133 (466)
+|..+.+... ..+++.|+|..+...+. -.|+|....+....... .......++|+||+|+|.|
T Consensus 3 ~P~~~~~~~~--~~~sv~l~W~~p~~~~~~I~~Y~i~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t~Y 69 (93)
T d2vkwa2 3 APKLEGQMGE--DGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWKPEIR-----------LPSGSDHVMLKSLDWNAEY 69 (93)
T ss_dssp CCEEEEEECT--TSSCEEEEEECCCCTTSCCCEEEEEEEETTSCCCCCEE-----------ECTTCCEEEECSCCTTCEE
T ss_pred CCccCEeEEc--CCCEEEEEeeCCCCCcCceEEEEEEeeecCcceeeeee-----------ccCCceEEEEeccccceEE
Confidence 5777766544 36899999998764433 36778776653221110 1112235789999999999
Q ss_pred EEEeccC---Ccc--ceEEEECC
Q 012311 134 YYKIGSG---DSS--REFWFQTP 151 (466)
Q Consensus 134 ~Yrv~~~---~~s--~~~~F~T~ 151 (466)
.+||..- +.| ....|+|.
T Consensus 70 ~~~V~A~N~~G~s~ps~~~~~T~ 92 (93)
T d2vkwa2 70 EVYVVAENQQGKSKAAHFVFRTA 92 (93)
T ss_dssp EEEEEEEETTEECCCEEEEEECC
T ss_pred EEEEEEEcCCCCcCCEeEEEEec
Confidence 9999752 112 24678874
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Probab=97.33 E-value=0.00012 Score=63.40 Aligned_cols=75 Identities=21% Similarity=0.204 Sum_probs=43.0
Q ss_pred eEEEEEccCCCCCCcH-HHHHHHHHhCCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCceee
Q 012311 160 YKFGIIGDLGQTYNSL-STLEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIE 236 (466)
Q Consensus 160 ~~f~v~GD~g~~~~~~-~tl~~~~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~~ 236 (466)
.|++++||.|...... ..++.+.+.++|.++++||++..................+.+.. ...|++.+.||||..
T Consensus 2 Mki~iiSDiHg~~~al~~vl~~~~~~~~D~iv~~GDiv~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~GNhD~~ 77 (184)
T d1su1a_ 2 MKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNE--VAHKVIAVRGNCDSE 77 (184)
T ss_dssp CEEEEECCCTTBHHHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHT--TGGGEEECCCTTCCH
T ss_pred cEEEEEeecCCCHHHHHHHHHHHhhcCCCEEEEcCcccccCccchhhhccCcHHHHHHHHh--cCCcEEEecCCCCch
Confidence 4899999999533222 22333444599999999999842211110001111122222222 245899999999975
|
| >d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.33 E-value=0.00017 Score=57.17 Aligned_cols=72 Identities=13% Similarity=0.284 Sum_probs=42.6
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCCCCc----EEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEPGPS----TVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~~~~----~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y 133 (466)
+|..+.+.......+++.|+|..+...+.. .|+|....+.. ...... .......++|+||+|+|+|
T Consensus 13 ~P~~p~~~~~~~~~~sv~l~W~~P~~~~~~I~~Y~v~~~~~~~~~-~~~~~~---------~~~~~~~~~i~~L~p~t~Y 82 (108)
T d1wf5a1 13 APEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENNAPW-TVLLAS---------VDPKATSVTVKGLVPARSY 82 (108)
T ss_dssp CCSSCEEEECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTTCCC-EEEESS---------CCTTCCEEEEESCCTTCEE
T ss_pred CCCCCEEEEEeccCCEEEEEEECCCCCCCccEEEEEEEEeccCCc-eEEeee---------ecCCccEEEECCCCCCCEE
Confidence 455544554444467999999876543333 45666544321 111111 1112234689999999999
Q ss_pred EEEecc
Q 012311 134 YYKIGS 139 (466)
Q Consensus 134 ~Yrv~~ 139 (466)
.+||..
T Consensus 83 ~frV~A 88 (108)
T d1wf5a1 83 QFRLCA 88 (108)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999975
|
| >d3d48r2 b.1.2.1 (R:101-204) Prolactin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.33 E-value=0.001 Score=51.36 Aligned_cols=83 Identities=14% Similarity=0.142 Sum_probs=48.4
Q ss_pred CCCceEEEeee--cCCCCcEEEEEEcCCCC----CCc----EEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecC
Q 012311 57 NSPQQVHITQG--DYDGKAVIISWVTPHEP----GPS----TVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDG 126 (466)
Q Consensus 57 ~~P~qv~lt~~--~~~~~~~~V~W~t~~~~----~~~----~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~g 126 (466)
.+|..+.+... +...+++.|+|..+... ... .++|....+........ .....++|.|
T Consensus 4 ~pP~~l~~~~~~~~~~~~~l~v~W~pP~~~~~~~~~~~~~Y~~~~~~~~~~~~~~~~~------------~~~~~~~i~~ 71 (104)
T d3d48r2 4 DPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIHFA------------GQQTEFKILS 71 (104)
T ss_dssp CCCEEEEEECC------CCEEEEEECCTTCCCTTSSCCEEEEEEEEETTCSSCEEEEE------------ETCSEEEECC
T ss_pred cCCCCCEEEEEeccCCCCeEEEEEeCCccccCCCCcEEEEEeeccccccccceeeecc------------ccccEEEECC
Confidence 46888877643 33457899999986421 112 34555554433322111 1123478999
Q ss_pred CCCCCEEEEEecc-------CCccceEEEECC
Q 012311 127 LEYDTKYYYKIGS-------GDSSREFWFQTP 151 (466)
Q Consensus 127 L~P~T~Y~Yrv~~-------~~~s~~~~F~T~ 151 (466)
|+|+|.|.+||.. +.||+...|+||
T Consensus 72 L~p~t~Y~~rVrA~n~~G~ws~wS~~~~v~tP 103 (104)
T d3d48r2 72 LHPGQKYLVQVRCKPDHGYWSAWSPATFIQIP 103 (104)
T ss_dssp --CCCEEEEEEEEEESSSCCCCCCCCEEEECC
T ss_pred CCCCCEEEEEEEEEeCCCCCCCCcCCEEEECc
Confidence 9999999999964 246888888886
|
| >d1erna2 b.1.2.1 (A:117-221) Erythropoietin (EPO) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Erythropoietin (EPO) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.32 E-value=0.0011 Score=51.71 Aligned_cols=84 Identities=18% Similarity=0.297 Sum_probs=52.4
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC-C----cEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG-P----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~-~----~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T 131 (466)
.+|..+.+..... ...+.|+|..+.... . -.|+|....+...... ... ..--..+.|.+|+|+|
T Consensus 6 dPP~nl~v~~~~~-~~~l~v~W~~P~~~~~~~~~~Y~v~y~~~~~~~~~~~----~~~------~~~~t~~~i~~L~p~t 74 (105)
T d1erna2 6 DAPVGLVARLADE-SGHVVLRWLPPPETPMTSHIRYEVDVSAGNGAGSVQR----VEI------LEGRTECVLSNLRGRT 74 (105)
T ss_dssp CCCEEEEEEECCC--CCEEEEEECSSSCSCGGGEEEEEEEEEC-CCCEEEE----EEE------CTTCCEEEECSCCSSC
T ss_pred CCCCCCEEEEecC-CCcEEEEeeeccccccceEEEEEEEEecCCCCCceEE----Eee------cCCccEEEEeCCCCCc
Confidence 4699999887754 467999999764322 2 2677766553222111 010 1111357899999999
Q ss_pred EEEEEecc--------C---CccceEEEECC
Q 012311 132 KYYYKIGS--------G---DSSREFWFQTP 151 (466)
Q Consensus 132 ~Y~Yrv~~--------~---~~s~~~~F~T~ 151 (466)
+|.+||.. | .||+...++||
T Consensus 75 ~Y~~rVRar~~~~~~~G~WSeWS~~v~~~tP 105 (105)
T d1erna2 75 RYTFAVRARMAEPSFGGFWSAWSEPVSLLTP 105 (105)
T ss_dssp EEEEEEEEEECSSSCCBCCCCCCCCEEEECC
T ss_pred EEEEEEEEEECCCCCCCCCCCCCCCEEeeCc
Confidence 99999954 1 35666778775
|
| >d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.31 E-value=0.00034 Score=53.95 Aligned_cols=82 Identities=20% Similarity=0.156 Sum_probs=50.3
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC--------CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG--------PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLE 128 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~--------~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~ 128 (466)
.+|..|.+.... .+++.|+|..+..+. .-.|+|............-. .. ...++|+||+
T Consensus 3 ~pP~~v~~~~~s--~tsi~v~W~~p~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~---------~~--~~~~~i~~L~ 69 (100)
T d1x5ja1 3 MPPVGVQASILS--HDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNAN---------AT--TLSYLVTGLK 69 (100)
T ss_dssp CCCEEEEEEEEE--TTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCCCEECC---------BC--SSEEEEESCC
T ss_pred CCCcCeEEEEec--CCEEEEEEcCCccccccceeeEEEEEEEeeecCCCcceeEecC---------CC--ccEEEECCCC
Confidence 358888877554 689999998653211 12466665544322111100 11 1246899999
Q ss_pred CCCEEEEEecc------CCccceEEEECC
Q 012311 129 YDTKYYYKIGS------GDSSREFWFQTP 151 (466)
Q Consensus 129 P~T~Y~Yrv~~------~~~s~~~~F~T~ 151 (466)
|+|.|.+||.. +.+|....++|.
T Consensus 70 p~t~Y~~~V~a~n~~g~s~~S~~~~~~T~ 98 (100)
T d1x5ja1 70 PNTLYEFSVMVTKGRRSSTWSMTAHGTTF 98 (100)
T ss_dssp TTCEECCEEEEECSSCBCCCCCCCCEECC
T ss_pred CCCEEEEEEEEEeCCcCcCCCCeEEEEec
Confidence 99999999964 245666677774
|
| >d1f6fb2 b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.30 E-value=0.0011 Score=51.29 Aligned_cols=83 Identities=14% Similarity=0.078 Sum_probs=51.2
Q ss_pred CCCceEEEeee--cCCCCcEEEEEEcCCCC----CC----cEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecC
Q 012311 57 NSPQQVHITQG--DYDGKAVIISWVTPHEP----GP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDG 126 (466)
Q Consensus 57 ~~P~qv~lt~~--~~~~~~~~V~W~t~~~~----~~----~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~g 126 (466)
++|+.+.+... ....+++.|+|..+... +. -.|+|....+..+...... ....++|.|
T Consensus 4 ~pP~nl~~~~~~~~~~~~~v~vsW~pP~~~~~~~~~~~l~Y~v~~~~~~~~~~~~~~~~------------~~~~~~i~~ 71 (103)
T d1f6fb2 4 EPPRNLTLEVKQLKDKKTYLWVKWSPPTITDVKTGWFTMEYEIRLKPEEAEEWEIHFTG------------HQTQFKVFD 71 (103)
T ss_dssp CCCEEEEEEEC----CCCCEEEEEECCTTSCTTTTSSCEEEEEEEEESSCSCCEEEEEE------------TCSEEEECC
T ss_pred CCCCCCEEEEEecccCCCEEEEEECCCCcccCCCCcEEEEEEEEEEeCCCcceeeeccc------------ceeEEEeCC
Confidence 46887766532 33467899999987422 11 2566666665444332111 112478999
Q ss_pred CCCCCEEEEEeccC-------CccceEEEECC
Q 012311 127 LEYDTKYYYKIGSG-------DSSREFWFQTP 151 (466)
Q Consensus 127 L~P~T~Y~Yrv~~~-------~~s~~~~F~T~ 151 (466)
|+|||.|.+||... .||+.-.++||
T Consensus 72 L~p~t~Y~~rVra~~~~G~wS~wS~~~~~~~P 103 (103)
T d1f6fb2 72 LYPGQKYLVQTRCKPDHGYWSRWSQESSVEMP 103 (103)
T ss_dssp CCTTCEEEEEEEEEESSSCCCCCCCCEEEECC
T ss_pred CCcceEEEEEEEEEeCCCCCCCCcCceeeECc
Confidence 99999999999642 36666666664
|
| >d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.28 E-value=0.00085 Score=52.39 Aligned_cols=82 Identities=15% Similarity=0.285 Sum_probs=50.3
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCCCcEEEE----eecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPGPSTVSY----GTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~~~~V~y----g~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~ 132 (466)
..|..+.+.... .+++.|+|.-+...+.....| ............. .+.-....+.+|+|+|+
T Consensus 12 ~~P~~~~~~~~~--~~sv~l~W~pp~~~~~~i~~Y~i~~~~~~~~~~~~~~~-----------~~~~~~~~~~~L~p~t~ 78 (105)
T d1x3da1 12 DIPNPPRIANRT--KNSLTLQWKAPSDNGSKIQNFVLEWDEGKGNGEFCQCY-----------MGSQKQFKITKLSPAMG 78 (105)
T ss_dssp CCCCCCEEEEEE--TTEEEEECCCCCCCSSCEEEEEEEECTTTSSSCCEEEE-----------EESCSEEEEESCCTTCE
T ss_pred cCCCCCEEEEcc--CCEEEEEEECCCCCcCccEEEEEEEecCCCcceeEEEe-----------cCCccEEEecCCcCCcE
Confidence 457778777553 579999998775444443333 3332222111111 01112467889999999
Q ss_pred EEEEecc------CCccceEEEECC
Q 012311 133 YYYKIGS------GDSSREFWFQTP 151 (466)
Q Consensus 133 Y~Yrv~~------~~~s~~~~F~T~ 151 (466)
|.+||.. +.+|+...|+|.
T Consensus 79 Y~frV~A~N~~G~s~~S~~~~~~T~ 103 (105)
T d1x3da1 79 CKFRLSARNDYGTSGFSEEVLYYTS 103 (105)
T ss_dssp EEEECCEEESSCBCCCCCCEEEECS
T ss_pred EEEEEEEECCCeEcCCCCcEEEECC
Confidence 9999964 246777888874
|
| >d2gysa2 b.1.2.1 (A:104-217) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.27 E-value=0.00097 Score=52.71 Aligned_cols=85 Identities=15% Similarity=0.234 Sum_probs=54.4
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCCC----------cEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPGP----------STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDG 126 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~~----------~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~g 126 (466)
.+|..|+++..+ +++.|+|..+...+. -.|+|............- . .......+.+.+
T Consensus 7 ~pP~nl~v~~~~---~~~~lsW~~P~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~---~------~~~~~~~~~~~~ 74 (114)
T d2gysa2 7 PEPRDLQISTDQ---DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQDSWEDAAIL---L------SNTSQATLGPEH 74 (114)
T ss_dssp CCCEEEEEEEET---TEEEEEEECCC-----CCSCGGGEEEEEEEEETTSCSTTCEEE---E------ESSSEEEECTTT
T ss_pred CcCCCeEEEEeC---CEEEEECCCCcccccccceeeeEEEEEEEEeccCCceEEEEEe---e------ccCceEEEEeCC
Confidence 469999987653 589999998743211 246677655432211110 0 111233578999
Q ss_pred CCCCCEEEEEecc----C--------CccceEEEECCCC
Q 012311 127 LEYDTKYYYKIGS----G--------DSSREFWFQTPPK 153 (466)
Q Consensus 127 L~P~T~Y~Yrv~~----~--------~~s~~~~F~T~p~ 153 (466)
|+|+|.|..||.. + .||+...|+|+|.
T Consensus 75 L~p~t~Y~~rVRa~~~~g~~~~g~wS~WS~~v~~~t~pg 113 (114)
T d2gysa2 75 LMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPG 113 (114)
T ss_dssp CCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCC
T ss_pred CCCCcEEEEEEEEEeCCCCCCCCCccCCcCCEeeeCcCC
Confidence 9999999999954 1 4678889999874
|
| >d1owwa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.27 E-value=0.00046 Score=53.26 Aligned_cols=83 Identities=19% Similarity=0.238 Sum_probs=54.7
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCC--CCcEEEEeecCCCCc-eEEEeEEEEeeeeccccceEEEEEecCCCCCCEEE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEP--GPSTVSYGTSADKFD-FTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYY 134 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~--~~~~V~yg~~~~~~~-~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~ 134 (466)
+|.++.++......+++.|+|..+... ..-.|+|....+... ... . .++-...++|+||+|||.|.
T Consensus 2 aP~~~~vt~~~~~~~s~~vsW~~P~~~~i~~Y~i~y~~~~~~~~~~~~-----~------v~~~~~~~~l~gL~P~t~Y~ 70 (93)
T d1owwa_ 2 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKEA-----T------IPGHLNSYTIKGLKPGVVYE 70 (93)
T ss_dssp CCCEEECCCCSSCTTCEEEEEECCSSSCEEEEEEEEEETTCSSCCEEE-----E------ECSSCCEEEECSCCSSEEEE
T ss_pred cCcccEEEEccCCCCEEEEEeecccccceeEEEEEEeeccccceeeee-----c------cCCCccEEEECCcccCcEEE
Confidence 588998887765568999999987421 234678887654322 111 1 12334457999999999999
Q ss_pred EEeccC---Ccc--ceEEEECC
Q 012311 135 YKIGSG---DSS--REFWFQTP 151 (466)
Q Consensus 135 Yrv~~~---~~s--~~~~F~T~ 151 (466)
.+|..- +.+ ....|+|.
T Consensus 71 v~v~av~~~G~s~~~~~~~tT~ 92 (93)
T d1owwa_ 71 GQLISIQQYGHQEVTRFDFTTT 92 (93)
T ss_dssp EEEEEEESSSCEEEEEEEEEEC
T ss_pred EEEEEEeCCCccCcEEEEEEec
Confidence 998642 222 24677774
|
| >d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Candida albicans [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Candida albicans [TaxId: 5476]
Probab=97.24 E-value=0.00042 Score=66.07 Aligned_cols=183 Identities=14% Similarity=0.120 Sum_probs=89.0
Q ss_pred CCCeEEEEEccCCCCCC----------c---HHH-HHHH---HH-hCCC-EEEEcccccccccccccccchhHHHHHHHH
Q 012311 157 DASYKFGIIGDLGQTYN----------S---LST-LEHY---ME-SGAQ-TVLFLGDLSYADRYQFIDVGVRWDSWGRFV 217 (466)
Q Consensus 157 ~~~~~f~v~GD~g~~~~----------~---~~t-l~~~---~~-~~~d-fvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~ 217 (466)
-..++|+...|+|.... . ... ..++ .+ .+++ ++|.+||++......... ..+ ...+
T Consensus 9 ~~~l~iLhtnD~Hg~l~~~~~~~~~~~~~gg~a~~~~~~~~~~~~~~~~~llldaGD~~~Gt~~~~~~-~~~----G~~~ 83 (322)
T d3c9fa2 9 WNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDIT-SPN----GLKS 83 (322)
T ss_dssp CCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSS-SST----TTTT
T ss_pred cCEEEEEEEeccccCCCCccccccccCccccHHHHHHHHHHHHHhcCCCEEEEECCccCCCCchhhhc-ccC----ChHH
Confidence 35799999999986321 0 111 2222 22 2566 566899999643221100 000 1233
Q ss_pred HHHhhcCCe-EEcCCCceeeccCcCCcccccccccccccCCCCCC--------C---CCCCceEEEeeC--CEEEEEEcC
Q 012311 218 ERSAAYQPW-IWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHLAS--------K---SSSPLWYAIRRA--SAHIIVLSS 283 (466)
Q Consensus 218 ~~l~~~~P~-~~~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~~~~--------~---~~~~~yYsf~~g--~v~fI~Lds 283 (466)
-.++..+++ .+++||||+++.+.. ...|......+..|.-.+ + .....|.-+..+ ++.++.+..
T Consensus 84 ~~~mn~lgyDa~t~GNHEfd~g~~~--l~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~~~y~i~~~~~~~i~i~g~~~ 161 (322)
T d3c9fa2 84 TPIFIKQDYDLLTIGNHELYLWENS--KQEYETVVNHFQDKYVCSNVDIRLDNGLFVPLGLKYKYFTTPIRGIRVMAFGF 161 (322)
T ss_dssp HHHHTTSCCSEECCCGGGSSSHHHH--HHHHHHHHHHTTTTBBCSSEEEECTTSCEEESSBSCEEEECTTTCCEEEEEEC
T ss_pred HHHHhccCCcEEeecceecccchHH--HHHHHHHHHhcCCCEEeeeEEecCCCCcccccCCceEEEEECCCcEEEEEEee
Confidence 344556676 788999998653210 000111111122221110 0 112346666665 578888766
Q ss_pred CCCCC---C-----C---hHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHHc-CCc-EE
Q 012311 284 YSPFV---K-----Y---TPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRY-KVD-YR 350 (466)
Q Consensus 284 ~~~~~---~-----~---~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y-~Vd-~~ 350 (466)
..... . . ..+..|+++.++ .+..-+||+.|.++-... .+...+.. .|-+.. +++ ++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~D~IV~l~H~g~~~d~----~~~~~~~~---~la~~~~~~~~~i 230 (322)
T d3c9fa2 162 LFDFKRFNSGTRVTPMAETIHEPWFQEALK----HEVDLIIIVGHTPISHNW----GEFYQVHQ---YLRQFFPDTIIQY 230 (322)
T ss_dssp CCCCCCCCTTEEECCHHHHTTSHHHHHHTT----SCCSEEEEECSSCCCTTT----CHHHHHHH---HHHHHCTTSEEEE
T ss_pred ccccccCCCCcEEeCHHHHHHHHHHHHHHh----CCCCEEEEEecCCccccc----cccchHHH---HHHHhCCCCCEEE
Confidence 43211 0 1 112245544433 467889999998863211 11111222 222222 344 68
Q ss_pred Eecccce
Q 012311 351 ISNLHYN 357 (466)
Q Consensus 351 ~~gh~~~ 357 (466)
+.||.|.
T Consensus 231 igGHsH~ 237 (322)
T d3c9fa2 231 FGGHSHI 237 (322)
T ss_dssp EECSSCC
T ss_pred ecccccc
Confidence 8999984
|
| >d1bqua2 b.1.2.1 (A:100-214) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.19 E-value=0.00058 Score=54.13 Aligned_cols=89 Identities=18% Similarity=0.199 Sum_probs=55.4
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~ 132 (466)
.+|..+.+...+...+++.|+|.-+...+ .-.|+|....+.......- ....+...+++|++|+|+|+
T Consensus 6 ~pP~~~~v~~~~~~~~si~v~W~~p~~~~~~~~~Y~v~y~~~~~~~~~~~~~--------~~~~~~~~~~~i~~L~~~t~ 77 (115)
T d1bqua2 6 NPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPP--------EDTASTRSSFTVQDLKPFTE 77 (115)
T ss_dssp CCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCG--------GGGCSCCSEEEECSCCSSEE
T ss_pred CCCCCCEEEEeccCCCEEEEEEeeccccccceeeeeeeeeeeeeeeeecccc--------ccccccccEEeeCCCccCcE
Confidence 46888888765555689999998653222 2356777655433211110 11223345688999999999
Q ss_pred EEEEecc----C-----CccceEEEECCCC
Q 012311 133 YYYKIGS----G-----DSSREFWFQTPPK 153 (466)
Q Consensus 133 Y~Yrv~~----~-----~~s~~~~F~T~p~ 153 (466)
|.+||.. + .+|....|+|+..
T Consensus 78 Y~~~V~a~~~~G~g~~S~~S~~~~~~T~~~ 107 (115)
T d1bqua2 78 YVFRIRCMKEDGKGYWSDWSEEASGITYED 107 (115)
T ss_dssp EEEEEEEEETTSCSCCCCCCCCEEEEECCC
T ss_pred EEEEEEEEeCCCccCCcCCcCCEEEECCCC
Confidence 9999943 2 3466778888643
|
| >d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.19 E-value=0.00044 Score=53.75 Aligned_cols=82 Identities=16% Similarity=0.342 Sum_probs=50.9
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCC--CCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEP--GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYY 134 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~--~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~ 134 (466)
.+|..+.+.... .+++.|+|..+... ..-.|+|............. ... ...+|+||+|+|.|.
T Consensus 12 ~~P~~~~~~~~~--~~si~l~W~~p~~~~i~~Y~i~y~~~~~~~~~~~~~----------~~~--~~~~i~~L~p~t~Y~ 77 (102)
T d1x5za1 12 GQPLNFKAEPES--ETSILLSWTPPRSDTIANYELVYKDGEHGEEQRITI----------EPG--TSYRLQGLKPNSLYY 77 (102)
T ss_dssp CCCEEEEEECSS--SSEEEEEEECCSCCCCCEEEECBEESSSCCCBCCEE----------CSS--SEEEEECCCTTCEEE
T ss_pred cCCCCeEEEEcc--CCEEEEEEECCCCCCccceEEEEEeCCCCceEEEEc----------CCc--CEEEECCCCCCCEEE
Confidence 368888877543 57999999875321 12356666544322111100 011 135799999999999
Q ss_pred EEeccC------CccceEEEECCC
Q 012311 135 YKIGSG------DSSREFWFQTPP 152 (466)
Q Consensus 135 Yrv~~~------~~s~~~~F~T~p 152 (466)
+||..- .+|+...|+|+.
T Consensus 78 ~~V~A~n~~G~g~~S~~v~~~T~e 101 (102)
T d1x5za1 78 FRLAARSPQGLGASTAEISARTMQ 101 (102)
T ss_dssp ECEEEECSSCEEEECCCEEEECCC
T ss_pred EEEEEEcCCCEeCCCCCEEEEcCC
Confidence 999642 356777888864
|
| >d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1. {Bacillus circulans [TaxId: 1397]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type III domain from chitinase A1. species: Bacillus circulans [TaxId: 1397]
Probab=97.18 E-value=0.0017 Score=49.04 Aligned_cols=77 Identities=18% Similarity=0.369 Sum_probs=46.5
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCCCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEEE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Yr 136 (466)
.+|..+.+.... .+++.|+|.-+.. ......|....+. ....... . -..+++||+|+|+|.||
T Consensus 5 ~~P~~l~~~~~~--~~sv~lsW~~p~~-~~~i~~Y~i~~~~-~~~~~~~-----------~--t~~~~~~L~p~t~Y~~~ 67 (88)
T d1k85a_ 5 TAPTNLASTAQT--TSSITLSWTASTD-NVGVTGYDVYNGT-ALATTVT-----------G--TTATISGLAADTSYTFT 67 (88)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSC-CSSEEEEEEEESS-SEEEEES-----------S--SEEEECCCCSSCEEEEE
T ss_pred CCCCCcEEEEec--CCEEEEEEeCCCC-CCCEEEEEEEccc-eEEEecC-----------C--CEEEECCCCCCCEEEEE
Confidence 468888876543 5799999976532 2345666553321 1111110 0 13578999999999999
Q ss_pred eccC-------CccceEEEEC
Q 012311 137 IGSG-------DSSREFWFQT 150 (466)
Q Consensus 137 v~~~-------~~s~~~~F~T 150 (466)
|..- ..|+...++|
T Consensus 68 V~A~n~~G~~s~~S~~v~vtT 88 (88)
T d1k85a_ 68 VKAKDAAGNVSAASNAVSVKT 88 (88)
T ss_dssp EEEEETTTEECCCCCCEEEEC
T ss_pred EEEEECCCCcCCCCcCEEEEC
Confidence 9652 2345555554
|
| >d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.16 E-value=0.0012 Score=50.95 Aligned_cols=86 Identities=13% Similarity=0.136 Sum_probs=54.0
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC------CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG------PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYD 130 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~------~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~ 130 (466)
.+|..+++.... .+++.|+|..+.... .-.|+|....+.......-. . ........+|.+|+|+
T Consensus 3 ~~P~~~~~~~~s--~tsi~v~W~~~~~~~~~~~i~~Y~v~y~~~~~~~~~~~~~~--~------~~~~~~~~~i~~L~p~ 72 (101)
T d1x4ya1 3 AGPYITFTDAVN--ETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKD--M------VEGDRYWHSISHLQPE 72 (101)
T ss_dssp SCCEEEEEECSS--SSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCE--E------EETTCCEEEECSCCTT
T ss_pred CCCcccEEEEEc--CCEEEEEEecCcccccccceEEEEEEeeeccceeeeeeeEE--E------EcCCeeEEEEcCCCCC
Confidence 468888887764 579999998653111 12477776554322111000 0 0112224578999999
Q ss_pred CEEEEEecc------CCccceEEEECCC
Q 012311 131 TKYYYKIGS------GDSSREFWFQTPP 152 (466)
Q Consensus 131 T~Y~Yrv~~------~~~s~~~~F~T~p 152 (466)
|.|.+||.. +.+|+...++|..
T Consensus 73 t~Y~~~v~a~n~~G~s~~S~~~~~~T~~ 100 (101)
T d1x4ya1 73 TSYDIKMQCFNEGGESEFSNVMICETKA 100 (101)
T ss_dssp CEEEEEEEEECTTCCCCCCCCEEEECCC
T ss_pred CEEEEEEEEEcCCCCCCCCCcEEEEccC
Confidence 999999964 3578888998863
|
| >d1iarb2 b.1.2.1 (B:97-197) Interleukin-4 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-4 receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.11 E-value=0.0013 Score=50.71 Aligned_cols=73 Identities=14% Similarity=0.247 Sum_probs=41.1
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCCC-------cEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPGP-------STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEY 129 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~~-------~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P 129 (466)
.+|+.|.+.... .+++.|+|..+...+. -.|+|....+.......-. ........+.|.+|+|
T Consensus 3 ~~P~~l~v~~~~--~~s~~v~W~~P~~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~p 72 (101)
T d1iarb2 3 RAPGNLTVHTNV--SDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRIYNV--------TYLEPSLRIAASTLKS 72 (101)
T ss_dssp CCCEEEEEC------CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCEEEEEE--------CSSCCEEEECC-----
T ss_pred ccCCcCEEEEEe--CCeEEEEEccccCCCCccceeeEEEEeeecccceeeeeeeee--------ccCccceEEEECCCCC
Confidence 468888776543 5799999998743321 2677877665443222110 1123345679999999
Q ss_pred CCEEEEEecc
Q 012311 130 DTKYYYKIGS 139 (466)
Q Consensus 130 ~T~Y~Yrv~~ 139 (466)
+|.|.+||..
T Consensus 73 ~t~Y~~rVrA 82 (101)
T d1iarb2 73 GISYRARVRA 82 (101)
T ss_dssp CCCEEEEEEE
T ss_pred CCEEEEEEEE
Confidence 9999999964
|
| >d1v5ja_ b.1.2.1 (A:) KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1355 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.11 E-value=0.00053 Score=54.04 Aligned_cols=87 Identities=16% Similarity=0.158 Sum_probs=54.5
Q ss_pred CCCCceEEEeeecCCCCcEEEEEEcCCCCC----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCC
Q 012311 56 HNSPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (466)
Q Consensus 56 ~~~P~qv~lt~~~~~~~~~~V~W~t~~~~~----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T 131 (466)
..+|+.+.++.. .+++.|+|.-+.... .-.|+|....+. +...... .....+.++|.||+|+|
T Consensus 8 ~sPP~~~~~~~t---~~si~l~W~pp~~~~~~i~~Y~v~~~~~~~~-~~~~~~~---------~~~~~~~~~i~~L~p~t 74 (108)
T d1v5ja_ 8 LSPPRGLVAVRT---PRGVLLHWDPPELVPKRLDGYVLEGRQGSQG-WEVLDPA---------VAGTETELLVPGLIKDV 74 (108)
T ss_dssp CCCCEEEEEEEC---SSSEEEEEECCSCCSSCCCBEEEEEEETTCC-CEEEEEE---------ECSSCCEEECCCCCTTS
T ss_pred CCcCCCeEEEEc---CCEEEEEEEecccCCCceeEEEEEeeeeeee-eeecccc---------ccceeeeEEEEeccCCc
Confidence 356888876543 468999998654322 236778765542 2222111 12233567899999999
Q ss_pred EEEEEeccC------CccceEEEECCCCCC
Q 012311 132 KYYYKIGSG------DSSREFWFQTPPKID 155 (466)
Q Consensus 132 ~Y~Yrv~~~------~~s~~~~F~T~p~~g 155 (466)
+|.+||..- ..|+...++|+...+
T Consensus 75 ~Y~~rV~A~n~~g~s~~S~~~~~~T~~~~~ 104 (108)
T d1v5ja_ 75 LYEFRLVAFAGSFVSDPSNTANVSTSGLSG 104 (108)
T ss_dssp CEECCBEEEETTEEEEECSCCCCCCSSCSS
T ss_pred EEEEEEEEEeCCCEeCCcCceEEECCCCCC
Confidence 999999652 345666677765433
|
| >d2cuha1 b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.09 E-value=0.001 Score=51.47 Aligned_cols=84 Identities=15% Similarity=0.203 Sum_probs=52.7
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCC-CCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYY 135 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~-~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Y 135 (466)
.+|+++++.-- ..+++.|+|..+... ..-.|+|....+... .. .. .+-...++|+||+|||.|.+
T Consensus 2 ~~P~~l~~~~~--t~~si~l~W~~p~~~i~~Y~v~~~~~~~~~~-~~-----~~------~~~~~~~~l~~L~p~t~Y~~ 67 (102)
T d2cuha1 2 DGPTQLRALNL--TEGFAVLHWKPPQNPVDTYDIQVTAPGAPPL-QA-----ET------PGSAVDYPLHDLVLHTNYTA 67 (102)
T ss_dssp SSCEEEECCCC--SSSCEEEEEECCSSCCSEEEEEEECSSSCCE-EE-----EE------ETTCSEEEECSCCSSSEEEE
T ss_pred cCCCccEEEEe--CCCEEEEEEEeeeccceeeEEEEEeccccce-ee-----ee------eeeeeeEEEccEEeeEEEEE
Confidence 35888877644 368999999876433 245677766543221 11 10 11122478999999999999
Q ss_pred EeccC-----CccceEEEECCCCC
Q 012311 136 KIGSG-----DSSREFWFQTPPKI 154 (466)
Q Consensus 136 rv~~~-----~~s~~~~F~T~p~~ 154 (466)
+|..- .......|+|++.+
T Consensus 68 ~V~a~~~~~~s~~~~~~~~T~~~~ 91 (102)
T d2cuha1 68 TVRGLRGPNLTSPASITFTTGLEA 91 (102)
T ss_dssp EEEEEETTEECCCEEEEEESCCCC
T ss_pred EEEEEeCCCCcCCEEEEEECCCCC
Confidence 99642 12234578998653
|
| >d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.09 E-value=0.0011 Score=49.95 Aligned_cols=70 Identities=11% Similarity=0.152 Sum_probs=46.3
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCC-CCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEEE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~-~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Yr 136 (466)
+|.++.++.- ..+++.|+|.-+... ..-.|+|....+....... . .+.-...++|+||+|+|.|.++
T Consensus 3 ~P~~l~v~~v--t~~sv~l~W~~p~~~~~~Y~i~~~~~~~~~~~~~~----~------v~~~~~~~~i~~L~p~t~Y~~~ 70 (89)
T d1fnfa3 3 SPTGIDFSDI--TANSFTVHWIAPRATITGYRIRHHPEHFSGRPRED----R------VPHSRNSITLTNLTPGTEYVVS 70 (89)
T ss_dssp CCEEEEEESC--CSSEEEEEEECCSSCCSEEEEEEECSCCSSCCEEE----E------EETTCCEEEEESCCTTCEEEEE
T ss_pred cCcCCEEEEe--cCCEEEEEEEeCCCEEeeEEEEEEECCCCCceEEE----E------ECCCccEEEECCCcccCEEEEE
Confidence 5888877754 368999999876433 2346888876544332110 0 0112335789999999999999
Q ss_pred ecc
Q 012311 137 IGS 139 (466)
Q Consensus 137 v~~ 139 (466)
|..
T Consensus 71 V~a 73 (89)
T d1fnfa3 71 IVA 73 (89)
T ss_dssp EEE
T ss_pred EEE
Confidence 975
|
| >d2d9qb2 b.1.2.1 (B:204-308) Granulocyte colony-stimulating factor (GC-SF) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.05 E-value=0.0012 Score=51.54 Aligned_cols=72 Identities=18% Similarity=0.134 Sum_probs=45.4
Q ss_pred CCcEEEEEEcCCCCC----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEEEecc------C
Q 012311 71 GKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGS------G 140 (466)
Q Consensus 71 ~~~~~V~W~t~~~~~----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Yrv~~------~ 140 (466)
.+++.|+|.-+...+ .-.|+|....+......... ..+-.+..+|.+|+|+|.|.+||.. |
T Consensus 20 ~~~v~l~W~pp~~~~~~~~~y~i~y~~~~~~~~~~~~~~---------~~~~~~~~~i~~L~p~t~Y~frVra~n~~g~G 90 (105)
T d2d9qb2 20 AGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWALVGP---------LPLEALQYELCGLLPATAYTLQIRCIRWPLPG 90 (105)
T ss_dssp CSCEEEEEECCGGGTTSCEEEEEEEEESSSCCCCEEEEE---------ECSCEEEEEECSCCSCCCEEEEEEEEECSSCC
T ss_pred CCeEEEEEcCCCCCCceeEEEEEEEEecCCccceeeeec---------ccCCcceeEEecccCCeEEEEEEEEEeCCCCC
Confidence 578999998764222 24677876554322211111 1234556799999999999999954 2
Q ss_pred ---CccceEEEECC
Q 012311 141 ---DSSREFWFQTP 151 (466)
Q Consensus 141 ---~~s~~~~F~T~ 151 (466)
.||....++|.
T Consensus 91 ~~S~wS~~~~~~t~ 104 (105)
T d2d9qb2 91 HWSDWSPSLELRTT 104 (105)
T ss_dssp CCCCCCCCEEECCC
T ss_pred CCcCCCCCEEEeCC
Confidence 36667777663
|
| >d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.05 E-value=0.001 Score=51.83 Aligned_cols=87 Identities=16% Similarity=0.219 Sum_probs=53.5
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC------CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG------PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYD 130 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~------~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~ 130 (466)
.+|..|.+...+ .+++.|+|..+.... .-.|+|............ .... .......+++|.+|+|+
T Consensus 10 ~pP~~v~v~~~~--~~si~l~W~~p~~~~~~~~i~~y~v~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~i~~L~p~ 81 (109)
T d1va9a1 10 GPPMDVTLQPVT--SQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYS--IVEM----KATGDSEVYTLDNLKKF 81 (109)
T ss_dssp SCCEEEEEEECS--SSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCB--CCBC----CCCSSEEEEEEESCCSS
T ss_pred CCCcCcEEEEec--CCEEEEEEcCCCCCCCCCcEEEEEEEEeeccccccceee--eeEE----ecCCCeeEEEECCCCcc
Confidence 468888887553 589999999763221 125777665443221100 0000 11234567789999999
Q ss_pred CEEEEEecc------CCccceEEEECC
Q 012311 131 TKYYYKIGS------GDSSREFWFQTP 151 (466)
Q Consensus 131 T~Y~Yrv~~------~~~s~~~~F~T~ 151 (466)
|.|.+||.. +.+|+...|+|+
T Consensus 82 t~Y~~~V~a~n~~G~g~~S~~v~~~T~ 108 (109)
T d1va9a1 82 AQYGVVVQAFNRAGTGPSSSEINATTL 108 (109)
T ss_dssp CCEEEEEEEEETTEECCCCCCEECCCC
T ss_pred eEEEEEEEEEcCCcCCCCCCCEEEEcC
Confidence 999999964 245666667664
|
| >d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Host cell factor 2, HCF-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.02 E-value=0.0025 Score=51.14 Aligned_cols=97 Identities=15% Similarity=0.242 Sum_probs=56.1
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC----CcEEEEeecCCCCceEEE--eEEEEeeeec---cccceEEEEEecCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAE--GTVNNYTFYK---YKSGYIHQCLVDGL 127 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~----~~~V~yg~~~~~~~~~a~--g~~~~y~~~~---~~~~~~h~v~l~gL 127 (466)
.+|..|.++.+ .+++.|+|.-+...+ .-.|+|............ .....+...+ ...+..-..+|.+|
T Consensus 9 ~aP~~v~v~~~---~~si~l~W~~P~~~~g~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L 85 (123)
T d1wfta_ 9 GAPSTVRISKN---VDGIHLSWEPPTSPSGNILEYSAYLAIRTAQMQDNPSQLVFMRIYCGLKTSCTVTAGQLANAHIDY 85 (123)
T ss_dssp CCCEEEEEEEC---SSEEEEEEECCSSCCSSCCCEEEEEEECSSCCCSCSCCCEEEEEEEESCSEEEEEHHHHTTCCCBC
T ss_pred cCCcccEEEeC---CCEEEEEecCchhcCCceEEEEEEEEECCCCCccccceeeeEEEecCCceeEeecCCccEEEEcCC
Confidence 47888888753 468999999764332 346778765543211000 0000110000 00001113467899
Q ss_pred CCCCEEEEEecc------CCccceEEEECCCCCCC
Q 012311 128 EYDTKYYYKIGS------GDSSREFWFQTPPKIDP 156 (466)
Q Consensus 128 ~P~T~Y~Yrv~~------~~~s~~~~F~T~p~~g~ 156 (466)
+|+|.|.+||.. +.+|++..|+|.+..++
T Consensus 86 ~p~t~Y~frV~A~N~~G~Gp~S~~~~~~t~~~~~P 120 (123)
T d1wfta_ 86 TSRPAIVFRISAKNEKGYGPATQIRWLQGNSKSGP 120 (123)
T ss_dssp SSSCEEEEEEEEBSSSSBCCCEEEEEECCSCCSSC
T ss_pred CCCCEEEEEEEEecCCcCCCCCCcEEEEecCCCCC
Confidence 999999999965 24678889999765443
|
| >d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.02 E-value=0.0018 Score=49.12 Aligned_cols=82 Identities=16% Similarity=0.199 Sum_probs=50.9
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCC-CCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYY 135 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~-~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Y 135 (466)
.+|+.+.+.-- ..+++.|+|..+... ..-.|+|....+.. ... .. ......++|+||+|||.|.+
T Consensus 3 ~~P~~l~~~~~--~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~-~~~-----~~------~~~~~~~~i~~L~p~t~Y~~ 68 (93)
T d2cuma1 3 EAPRDLEAKEV--TPRTALLTWTEPPVRPAGYLLSFHTPGGQT-QEI-----LL------PGGITSHQLLGLFPSTSYNA 68 (93)
T ss_dssp CCCEEEEEESC--CSSCEEEEEECCSSCCSEEEEEEECTTSCE-EEE-----EE------CSSCSEEEECSCCTTCEEEE
T ss_pred CcCCCCEEEEe--CCCEEEEEEEccccccccEEEEEEcccccc-EEE-----EE------CCCccEEEEeCccCCCEEEE
Confidence 46887776643 368999999876533 34567787654321 111 11 11223578999999999999
Q ss_pred EeccC---Ccc--ceEEEECCC
Q 012311 136 KIGSG---DSS--REFWFQTPP 152 (466)
Q Consensus 136 rv~~~---~~s--~~~~F~T~p 152 (466)
+|..- +.| ....|+|..
T Consensus 69 ~V~a~~~~g~s~~~~~~~tT~g 90 (93)
T d2cuma1 69 RLQAMWGQSLLPPVSTSFTTGG 90 (93)
T ss_dssp EEEEEBTTBCCCCEEEEEECCC
T ss_pred EEEEEeCCCCCCCEEEEEEeCC
Confidence 99652 122 234677754
|
| >d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=97.00 E-value=0.0016 Score=48.98 Aligned_cols=69 Identities=19% Similarity=0.213 Sum_probs=46.5
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCC-CCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEEE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~-~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Yr 136 (466)
+|.++.+.... .+++.|+|..+... ..-.|+|....+.......- ......+.|+||+|+|.|.++
T Consensus 3 ~P~~l~v~~v~--~~s~~l~W~~~~~~~~~Y~i~~~~~~~~~~~~~~~-----------~~~~~~~~i~~L~p~t~Y~~~ 69 (88)
T d1qr4a2 3 SPKGISFSDIT--ENSATVSWTPPRSRVDSYRVSYVPITGGTPNVVTV-----------DGSKTRTKLVKLVPGVDYNVN 69 (88)
T ss_dssp CCSCEEEESCC--SSCEEEEECCCSSCCSEEEEEEEETTCCCCEEEEE-----------ETTCCEEEECSCCSSCEEEEE
T ss_pred CCcceEEEEec--CCEEEEEEEcccEeeceEEEEEEeccCCceEEEEe-----------cCCccEEEECCCCCCCEEEEE
Confidence 48888777554 58999999866433 23478888766543332211 112235799999999999999
Q ss_pred ecc
Q 012311 137 IGS 139 (466)
Q Consensus 137 v~~ 139 (466)
|..
T Consensus 70 V~a 72 (88)
T d1qr4a2 70 IIS 72 (88)
T ss_dssp EEE
T ss_pred EEE
Confidence 965
|
| >d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.00 E-value=0.0024 Score=48.10 Aligned_cols=70 Identities=21% Similarity=0.329 Sum_probs=46.0
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCC-CCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEEE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~-~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Yr 136 (466)
+|.+++++-- ..+++.|+|.-+... ..-.|+|....+...... ... ..-...++|.||+|||.|.++
T Consensus 4 ~P~~l~v~~~--s~~s~~l~W~~p~~~~~~y~v~~~~~~~~~~~~~----~~~------~~~~~~~~i~~L~p~t~Y~~~ 71 (90)
T d1tena_ 4 APSQIEVKDV--TDTTALITWFKPLAEIDGIELTYGIKDVPGDRTT----IDL------TEDENQYSIGNLKPDTEYEVS 71 (90)
T ss_dssp CCEEEEEESC--CSSCEEEEEECCSSCCSEEEEEEEETTCTTCCEE----EEE------ETTCCEEEECSCCTTCEEEEE
T ss_pred CCCCcEEEEe--cCCEEEEEEEeCceEeccEEEEEEEcCCCceeEE----EEe------cCCcceeeEeeecCCCEEEEE
Confidence 5888888754 368999999876433 234788876654322111 010 112235789999999999999
Q ss_pred ecc
Q 012311 137 IGS 139 (466)
Q Consensus 137 v~~ 139 (466)
|..
T Consensus 72 V~a 74 (90)
T d1tena_ 72 LIS 74 (90)
T ss_dssp EEE
T ss_pred EEE
Confidence 965
|
| >d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.99 E-value=0.00043 Score=55.63 Aligned_cols=89 Identities=16% Similarity=0.199 Sum_probs=53.2
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCC--C----CcEEEEeecCCCC---ceEEEeEEEEeeeeccccceEEEEEecCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEP--G----PSTVSYGTSADKF---DFTAEGTVNNYTFYKYKSGYIHQCLVDGL 127 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~--~----~~~V~yg~~~~~~---~~~a~g~~~~y~~~~~~~~~~h~v~l~gL 127 (466)
.+|+.|.+.... .+++.|+|.-+... . ...+.|....... ........... ..-..+++|.+|
T Consensus 16 ~~P~~v~v~~~~--~~si~l~W~~p~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~i~~L 87 (125)
T d1uena_ 16 VAPGNVRVNVVN--STLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTF------QGSKTHGMLPGL 87 (125)
T ss_dssp CCCSSCEEEEEE--TTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEEE------ESSCSEEEEESC
T ss_pred CCCcccEEEEec--CCEEEEEEeCccCCCCCcceeeEEeEEEeecCCccceeecccceEEEe------CCCccEEEECCC
Confidence 458888887554 47999999765311 1 1234444432211 11111111111 122346899999
Q ss_pred CCCCEEEEEeccC------CccceEEEECCCC
Q 012311 128 EYDTKYYYKIGSG------DSSREFWFQTPPK 153 (466)
Q Consensus 128 ~P~T~Y~Yrv~~~------~~s~~~~F~T~p~ 153 (466)
+|+|.|.+||..- .+|+...|+|++.
T Consensus 88 ~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 119 (125)
T d1uena_ 88 EPFSHYTLNVRVVNGKGEGPASPDRVFNTPEG 119 (125)
T ss_dssp CSSCEEEEEEEEEESSCEEEECCCEEEECCCC
T ss_pred CCCCEEEEEEEEEeCCcccCCCCCEEEECCCC
Confidence 9999999999652 3678889999864
|
| >d1uc6a_ b.1.2.1 (A:) Ciliary neurotrophic factor receptor alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ciliary neurotrophic factor receptor alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.96 E-value=0.003 Score=49.28 Aligned_cols=82 Identities=12% Similarity=0.051 Sum_probs=50.9
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC-------CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG-------PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEY 129 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~-------~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P 129 (466)
.+|..+.++.-....+++.|+|..+.... .-.++|....+..+..+.. .....++|.+|+|
T Consensus 9 ~PP~~l~v~~~~~~~~~l~l~W~~P~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~------------~~~~~~~i~~L~~ 76 (109)
T d1uc6a_ 9 DPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVEL------------SNGTAHTITDAYA 76 (109)
T ss_dssp CCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCCEEE------------SSCSEEEETTCCS
T ss_pred CCCCCCEEEEEecCCCEEEEEEeCCcccCCCCeeEEEEEEEEeecCCCceEEecc------------CCceeEEeCCCCC
Confidence 36888888765444678999999874221 1245666555443322211 1122467899999
Q ss_pred CCEEEEEeccC--------CccceEEEEC
Q 012311 130 DTKYYYKIGSG--------DSSREFWFQT 150 (466)
Q Consensus 130 ~T~Y~Yrv~~~--------~~s~~~~F~T 150 (466)
+|.|.+||... .||....++|
T Consensus 77 ~t~Y~~rVrA~~~~~g~wS~WS~~~~~tt 105 (109)
T d1uc6a_ 77 GKEYIIQVAAKDNEIGTWSDWSVAAHATP 105 (109)
T ss_dssp SSCEEEEEECCBSSSCCCCCCCEEEEECC
T ss_pred CCEEEEEEEEEECCCCCcCCCCCCEEeEC
Confidence 99999999652 3455555544
|
| >d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.96 E-value=0.0033 Score=50.42 Aligned_cols=87 Identities=16% Similarity=0.169 Sum_probs=50.6
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCCC----cEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPGP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~~----~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~ 132 (466)
..|..|++.... .+++.|+|.-+..... ..++|............-.. ....+...|.+|+|++.
T Consensus 18 ~~P~~~~v~~~~--~~sv~l~W~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~i~~L~p~t~ 86 (127)
T d1ueya_ 18 NPPFDLELTDQL--DKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE---------VSGTQTTAQLNLSPYVN 86 (127)
T ss_dssp CCCEEEEEECCS--SSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEEEEEE---------EESSCCEEEECCCTTCE
T ss_pred cCCCCcEEEEec--CCeEEEEEeCCcccccceEeeeeeeccccccceeEEEEee---------cCCceEEEECCCccCCE
Confidence 368888887554 5799999986654332 24455444333222111110 11122357889999999
Q ss_pred EEEEecc------CCccce-EEEECCCCC
Q 012311 133 YYYKIGS------GDSSRE-FWFQTPPKI 154 (466)
Q Consensus 133 Y~Yrv~~------~~~s~~-~~F~T~p~~ 154 (466)
|.+||.. +.+|+. ..|+|.+..
T Consensus 87 Y~frV~A~n~~G~s~~S~~s~~~~t~~~~ 115 (127)
T d1ueya_ 87 YSFRVMAVNSIGKSLPSEASEQYLTKASE 115 (127)
T ss_dssp ECCEEEEEESSCBCCCCSCCCCEECCCSS
T ss_pred EEEEEEEEcCCcCcCCcCCcccEEcCCCC
Confidence 9999964 223433 457777653
|
| >d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.94 E-value=0.0015 Score=49.84 Aligned_cols=71 Identities=18% Similarity=0.297 Sum_probs=44.3
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCCCC-----cEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEPGP-----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~~~-----~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~ 132 (466)
.|..+.+... ..+++.|+|..+..... -.|+|+...+....... .. .......++|+||+|+|.
T Consensus 9 ~P~~~~v~~~--s~tsv~l~W~~P~~~~~~~i~gY~i~y~~~~~~~~~~~~----~~-----~~~~~~~~~i~~L~p~t~ 77 (95)
T d2ibga1 9 VPELLEIEEY--SETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKA----TI-----EGAHARSFKIAPLETATM 77 (95)
T ss_dssp CCEECCCBCC--SSSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCCEEE----EE-----ECTTCCEEEECSCCTTCE
T ss_pred CCcCeEEEEe--CCCEEEEEEEeeeeccCCcccccceeEeeeeecceeeee----ec-----cCCceeEEEEeeccCCeE
Confidence 4777766544 35899999986533221 26788876543321111 00 112334578999999999
Q ss_pred EEEEecc
Q 012311 133 YYYKIGS 139 (466)
Q Consensus 133 Y~Yrv~~ 139 (466)
|.+||..
T Consensus 78 Y~~~V~A 84 (95)
T d2ibga1 78 YEFKLQS 84 (95)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999975
|
| >d2b5ic1 b.1.2.1 (C:130-224) Cytokine receptor common gamma chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor common gamma chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.93 E-value=0.0014 Score=50.37 Aligned_cols=69 Identities=14% Similarity=0.248 Sum_probs=47.8
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCC--CCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEP--GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYY 134 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~--~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~ 134 (466)
.+|+.+.|.... .+++.|+|..+... -.-.|+|....+....... . .....++|.+|+|+|.|.
T Consensus 4 ~~P~nl~v~~~~--~~~v~l~W~~p~~~~~~~y~v~y~~~~~~~~~~~~-~-----------~~~~~~~~~~L~p~t~Y~ 69 (95)
T d2b5ic1 4 WAPENLTLHKLS--ESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQS-V-----------DYRHKFSLPSVDGQKRYT 69 (95)
T ss_dssp CCCEEEEEEEEE--TTEEEEEEECSSCSTTCEEEEEEEETTCSSCEEEE-E-----------CSSCEEEECSCCTTSCEE
T ss_pred cCCCCCEEEEEe--CCEEEEEECCCCCceeEEEEEEEEcCCCceeeEee-e-----------cccceeEcCCCCCCCEEE
Confidence 469999887654 47999999987532 1347888877654433221 1 112357899999999999
Q ss_pred EEecc
Q 012311 135 YKIGS 139 (466)
Q Consensus 135 Yrv~~ 139 (466)
+||..
T Consensus 70 frVRa 74 (95)
T d2b5ic1 70 FRVRS 74 (95)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99965
|
| >d1cd9b2 b.1.2.1 (B:108-213) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.92 E-value=0.0012 Score=51.67 Aligned_cols=70 Identities=13% Similarity=0.060 Sum_probs=44.8
Q ss_pred CCcEEEEEEcCCCCCC----cEEEEeecCCC-CceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEEEecc------
Q 012311 71 GKAVIISWVTPHEPGP----STVSYGTSADK-FDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGS------ 139 (466)
Q Consensus 71 ~~~~~V~W~t~~~~~~----~~V~yg~~~~~-~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Yrv~~------ 139 (466)
.+++.|+|..+...+. -.|+|....+. .+..+.- ...-.+..+|++|+|+|.|.+||..
T Consensus 21 ~~~i~v~W~pp~~~~~~~~~Y~i~y~~~~~~~~w~~v~~----------~~~~~~~~~l~~L~p~t~Y~frVra~~~~g~ 90 (106)
T d1cd9b2 21 PGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVFH----------LPSSKDQFELCGLHQAPVYTLQMRCIRSSLP 90 (106)
T ss_dssp CSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEEEEE----------EESCEEEEEECCCCSCSCEEEEEEEEESSSC
T ss_pred CCEEEEEEcCcccCCccceEEEEEEeeccccccceeeec----------ccCCceEEEEeccCCCeEEEEEEEEEeCCCC
Confidence 5789999987643322 37888865433 3333321 1123445679999999999999954
Q ss_pred C---CccceEEEEC
Q 012311 140 G---DSSREFWFQT 150 (466)
Q Consensus 140 ~---~~s~~~~F~T 150 (466)
+ .||...+|+|
T Consensus 91 g~wS~wS~~~~~~~ 104 (106)
T d1cd9b2 91 GFWSPWSPGLQLRP 104 (106)
T ss_dssp CCCCCCCCCEEECC
T ss_pred CCCcCCCCCeEecC
Confidence 1 3566677765
|
| >d2crma1 b.1.2.1 (A:8-114) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.91 E-value=0.00084 Score=52.51 Aligned_cols=70 Identities=20% Similarity=0.321 Sum_probs=42.1
Q ss_pred CCcEEEEEEcCCCCC-----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEEEecc------
Q 012311 71 GKAVIISWVTPHEPG-----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGS------ 139 (466)
Q Consensus 71 ~~~~~V~W~t~~~~~-----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Yrv~~------ 139 (466)
.+++.|+|..+...+ .-.|+|.............. .......|+||+|||+|.+||..
T Consensus 25 ~~sv~l~W~~P~~~~g~~~~~y~v~~~~~~~~~~~~~~~~-----------~~~~~~~i~~L~p~t~Y~~rV~A~n~~G~ 93 (107)
T d2crma1 25 SHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIYS-----------GATREHLCDRLNPGCFYRLRVYCISDGGQ 93 (107)
T ss_dssp TTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEEEC-----------SSCSEEEECSCCTTSCEEEEEEEEETTEE
T ss_pred CCEEEEEEEECccCCcceEEEEEEEEEeecCCCcEEEeec-----------CCccEEEEeccCCCCEEEEEEEEECCCcC
Confidence 479999998654322 23556654443332221111 11123589999999999999965
Q ss_pred CCccceEEEECC
Q 012311 140 GDSSREFWFQTP 151 (466)
Q Consensus 140 ~~~s~~~~F~T~ 151 (466)
+.+|+...|+|+
T Consensus 94 s~~S~~v~v~Tp 105 (107)
T d2crma1 94 SAVSESLLVQTP 105 (107)
T ss_dssp CCCCCCCCCCCC
T ss_pred cCCCCcEEEECC
Confidence 245666667774
|
| >d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.86 E-value=0.0019 Score=50.54 Aligned_cols=76 Identities=11% Similarity=-0.031 Sum_probs=44.4
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCCC----cEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPGP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~~----~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~ 132 (466)
.+|..+.+... ..+++.|+|.-+...+. -.|+|.................. .......+.|.||+|+|.
T Consensus 12 ~~P~~~~~~~~--~~~sv~l~W~pp~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~v~~L~p~t~ 84 (111)
T d1wisa1 12 GPPTNLGISNI--GPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLS-----NEPDARSMEVPDLNPFTC 84 (111)
T ss_dssp CCCEEEEEESC--CSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEEE-----SCTTCSEEEECSCCTTSE
T ss_pred cCCCCCEEEEc--CCCEEEEEEeCCCCCCCceeEEEEeeeecccCCCcceeeeeeee-----cccceeEEEeCCCCCCCE
Confidence 46888887643 35799999986543322 35666654433221110000110 122233467899999999
Q ss_pred EEEEecc
Q 012311 133 YYYKIGS 139 (466)
Q Consensus 133 Y~Yrv~~ 139 (466)
|.+||..
T Consensus 85 Y~frV~A 91 (111)
T d1wisa1 85 YSFRMRQ 91 (111)
T ss_dssp ECCCCEE
T ss_pred EEEEEEE
Confidence 9999965
|
| >d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.86 E-value=0.002 Score=50.60 Aligned_cols=71 Identities=18% Similarity=0.331 Sum_probs=42.6
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCCC----CcEEEEeecCCCCc-eEEEeEEEEeeeeccccceEEEEEecCCCCCCE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFD-FTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~~----~~~V~yg~~~~~~~-~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~ 132 (466)
+|..+.++-.. .+++.|+|.-+...+ .-.|+|........ ...... .......++|+||+|+|.
T Consensus 13 ~P~~~~v~~~~--~~sv~l~W~p~~~~g~~I~~Y~v~~~~~~~~~~~~~~~~~---------~~~~~~~~~v~~L~p~t~ 81 (108)
T d1x4za1 13 APDRPTISTAS--ETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSA---------IPPSRLSVEITGLEKGIS 81 (108)
T ss_dssp CCCCCEEEECC--SSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEEE---------ECTTCCEEEEESCCTTCE
T ss_pred cCCCCEEEEcc--CCEEEEEEECCCCCCCccEEEEEEEEecCCCCceEEEEEe---------ecCCccEEEECCCCCCCE
Confidence 57776666433 579999995433222 23567776544322 222111 112233478999999999
Q ss_pred EEEEecc
Q 012311 133 YYYKIGS 139 (466)
Q Consensus 133 Y~Yrv~~ 139 (466)
|.+||..
T Consensus 82 Y~frV~A 88 (108)
T d1x4za1 82 YKFRVRA 88 (108)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999975
|
| >d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.83 E-value=0.004 Score=46.75 Aligned_cols=69 Identities=17% Similarity=0.245 Sum_probs=44.6
Q ss_pred CceEEEeeecCCCCcEEEEEEcCCCC--CCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEEE
Q 012311 59 PQQVHITQGDYDGKAVIISWVTPHEP--GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (466)
Q Consensus 59 P~qv~lt~~~~~~~~~~V~W~t~~~~--~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Yr 136 (466)
|..++++.. ..+++.|+|.-+... ..-.|+|....+...... .. .......++|+||+|+|.|.++
T Consensus 4 P~~l~~~~~--~~~sv~l~W~~p~~~~~~~y~v~y~~~~~~~~~~~----~~------~~~~~~~~~i~~L~p~t~Y~~~ 71 (91)
T d1fnfa2 4 PTDLRFTNI--GPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVAE----LS------ISPSDNAVVLTNLLPGTEYVVS 71 (91)
T ss_dssp CEEEEEESC--CSSCEEEEEECCTTCCCSEEEEEEEETTCTTCCEE----EE------ECTTCCEEEECSCCTTCEEEEE
T ss_pred CCceEEEEe--CCCEEEEEEEecCCCCcceeEEEEEECCCCccEEE----EE------eCCCceEEEEeceeCCCEEEEE
Confidence 778877644 368999999876422 124678887655432111 01 0112234799999999999999
Q ss_pred ecc
Q 012311 137 IGS 139 (466)
Q Consensus 137 v~~ 139 (466)
|..
T Consensus 72 V~a 74 (91)
T d1fnfa2 72 VSS 74 (91)
T ss_dssp EEE
T ss_pred EEE
Confidence 975
|
| >d1fnha1 b.1.2.1 (A:3-92) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.82 E-value=0.0035 Score=46.96 Aligned_cols=69 Identities=17% Similarity=0.184 Sum_probs=44.3
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCCC-CcEEEEeecCCCCce-EEEeEEEEeeeeccccceEEEEEecCCCCCCEEEE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEPG-PSTVSYGTSADKFDF-TAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYY 135 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~~-~~~V~yg~~~~~~~~-~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Y 135 (466)
+|..+.++.-. .+++.|+|.-+.... .-.++|......... .... ..-.-..+|+||+|||+|++
T Consensus 2 pP~~l~~~~v~--~~si~l~W~~p~~~~~~~~i~~~~~~~~~~~~~~~~-----------~~~~~~~~i~~L~p~t~Y~~ 68 (90)
T d1fnha1 2 APTDLKFTQVT--PTSLSAQWTPPNVQLTGYRVRVTPKEKTGPMKEINL-----------APDSSSVVVSGLMVATKYEV 68 (90)
T ss_dssp CCEEEEEEEEC--SSCEEEEEECCSSCCSEEEEEEEESSSCSCCCEEEE-----------CTTCCEEEECSCCTTCEEEE
T ss_pred CCCCEEEEEec--CCEEEEEEEccceeccceEEEEEeeeCCCceEEEEe-----------CCCCeEEEEecccCceEEEE
Confidence 37788777654 589999998765332 345777655432221 1110 11112479999999999999
Q ss_pred Eecc
Q 012311 136 KIGS 139 (466)
Q Consensus 136 rv~~ 139 (466)
||..
T Consensus 69 ~V~a 72 (90)
T d1fnha1 69 SVYA 72 (90)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9975
|
| >d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=96.80 E-value=0.012 Score=55.04 Aligned_cols=173 Identities=12% Similarity=0.063 Sum_probs=87.3
Q ss_pred CeEEEEEccCCCCCC--------------cHHH----HHHHHHhCC-CEEEEcccccccccccccccchhHHHHHHHHHH
Q 012311 159 SYKFGIIGDLGQTYN--------------SLST----LEHYMESGA-QTVLFLGDLSYADRYQFIDVGVRWDSWGRFVER 219 (466)
Q Consensus 159 ~~~f~v~GD~g~~~~--------------~~~t----l~~~~~~~~-dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~ 219 (466)
.++|+..+|+|.... .... ++++.++.+ -++|.+||++...... .+.. .+.+-.
T Consensus 2 tl~IlhtnD~Hg~l~~~~~~~~~~~~~~gG~ar~~t~i~~~r~~~~~~l~ldaGD~~~Gs~~~------~~~~-g~~~~~ 74 (302)
T d2z1aa2 2 TLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLYF------NQYR-GLADRY 74 (302)
T ss_dssp EEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHHH------HHHT-THHHHH
T ss_pred EEEEEEEcccccCcccccccccCCccccCcHHHHHHHHHHHHHhCCCeEEEEcCCCCCCCHhH------hhhc-chhHHH
Confidence 467888999975321 1222 334444444 4678999999542211 1111 112222
Q ss_pred HhhcCC-eEEcCCCceeeccCcCCcccccccccccccCCCC----------CCCCCCCceEEEeeCCEEEEEEc--CCC-
Q 012311 220 SAAYQP-WIWSAGNHEIEYMTYMGEVVPFKSYLHRYPTPHL----------ASKSSSPLWYAIRRASAHIIVLS--SYS- 285 (466)
Q Consensus 220 l~~~~P-~~~~~GNHE~~~~~~~~~~~~f~~y~~rf~~P~~----------~~~~~~~~yYsf~~g~v~fI~Ld--s~~- 285 (466)
++..+. =..++||||+++... .+..+.....+|.- .....-..|.-++.+++++-++. +..
T Consensus 75 ~~n~~gyDa~~~GNHEfd~G~~-----~l~~~~~~~~~p~l~aNi~~~~~~~~~~~~~~y~i~~~~g~kIgiiG~~t~~~ 149 (302)
T d2z1aa2 75 FMHRLRYRAMALGNHEFDLGPG-----PLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPDT 149 (302)
T ss_dssp HHHHTTCCEEECCGGGGTTCHH-----HHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECTTH
T ss_pred HHHhcccccccccchhhhcChh-----HHHHHhhhcccceeEeeeeccccccccCccceeEEEEECCeEEEEEecccccc
Confidence 222333 378999999976421 01111111111110 00111235677888986654443 321
Q ss_pred -----C---C--CCChHHHHHHHHHHhhccCCCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHHc-CCcEEEecc
Q 012311 286 -----P---F--VKYTPQWEWLREELKKVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRY-KVDYRISNL 354 (466)
Q Consensus 286 -----~---~--~~~~~Q~~WL~~~L~~~~r~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y-~Vd~~~~gh 354 (466)
+ + ....+..++..++|++ .+..-+|++.|..... . ..|..+. +||+++.||
T Consensus 150 ~~~~~~~~~~~~~d~~~~~~~~~~~l~~---~~~DiiV~l~H~g~~~--------d-------~~la~~~~giD~ii~gh 211 (302)
T d2z1aa2 150 REISNPGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYGE--------D-------LKLARRLVGVQVIVGGH 211 (302)
T ss_dssp HHHSCCCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHHH--------H-------HHHHTTCSSCCEEEECS
T ss_pred cccccccCcccccCHHHHHHHHHHHhhc---cCCCEEEEeeccCcch--------h-------hHHHhcCCCeeeeecCc
Confidence 0 0 1123344555555654 4567899999986411 0 1122322 799999999
Q ss_pred cceecCC
Q 012311 355 HYNISSG 361 (466)
Q Consensus 355 ~~~~~~~ 361 (466)
.|.+..+
T Consensus 212 ~h~~~~~ 218 (302)
T d2z1aa2 212 SHTLLGS 218 (302)
T ss_dssp SCCCBSC
T ss_pred cceeecc
Confidence 9875543
|
| >d1tdqa1 b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.79 E-value=0.0051 Score=46.56 Aligned_cols=71 Identities=17% Similarity=0.297 Sum_probs=46.4
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC-CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG-PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYY 135 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~-~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Y 135 (466)
.+|..+.+.... .+++.|+|.-+.... .-.|.|....+..... ... .......++|+||+|+|+|..
T Consensus 5 ~~P~~l~v~~v~--~~si~v~W~~p~~~~~~y~i~~~~~~~~~~~~------~~~----~~~~~~~~~i~~L~p~t~Y~v 72 (93)
T d1tdqa1 5 DGPTQILVRDVS--DTVAFVEWTPPRAKVDFILLKYGLVGGEGGKT------TFR----LQPPLSQYSVQALRPGSRYEV 72 (93)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSSCCSEEEEEEEESSSSCCCE------EEE----ECTTCSEEEECSCCTTCEEEE
T ss_pred CcCCCCEEEEeC--CCEEEEEEEccccCCCceEEEEEeccCcceee------EEE----eCCCceEEEEeCcccceEEEE
Confidence 468888887664 579999998664432 3467787765432211 111 011123468999999999999
Q ss_pred Eecc
Q 012311 136 KIGS 139 (466)
Q Consensus 136 rv~~ 139 (466)
+|..
T Consensus 73 ~V~a 76 (93)
T d1tdqa1 73 SISA 76 (93)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9965
|
| >d1fnha2 b.1.2.1 (A:93-182) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.78 E-value=0.0044 Score=46.60 Aligned_cols=69 Identities=17% Similarity=0.252 Sum_probs=46.0
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCC-CCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEEE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~-~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Yr 136 (466)
+|.+++++.-. .+++.|+|.-+..+ ..-.|+|....+....... ...-.....|+||+|||.|.++
T Consensus 4 pP~~l~v~~~~--~~si~v~W~~p~~~~~~Y~i~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t~Y~~~ 70 (90)
T d1fnha2 4 PPRRARVTDAT--ETTITISWRTKTETITGFQVDAVPANGQTPIQRT-----------IKPDVRSYTITGLQPGTDYKIY 70 (90)
T ss_dssp CCEEEEEEEEC--SSEEEEEEECCSSCCCCEEEEEEESSSSCCEEEE-----------CCTTCSEEEEESCCTTCEEEEE
T ss_pred cCCCCEEEEec--CCEEEEEEECCCCCCceeEEEEEEccCCceEEEe-----------cCCCccEEEeCCCCCCcEEEEE
Confidence 58888887553 58999999865433 3456778776543322111 1112235689999999999999
Q ss_pred ecc
Q 012311 137 IGS 139 (466)
Q Consensus 137 v~~ 139 (466)
|..
T Consensus 71 V~a 73 (90)
T d1fnha2 71 LYT 73 (90)
T ss_dssp EEE
T ss_pred EEE
Confidence 965
|
| >d1n26a3 b.1.2.1 (A:196-299) Interleukin-6 receptor alpha chain, domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-6 receptor alpha chain, domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.74 E-value=0.0036 Score=48.39 Aligned_cols=72 Identities=14% Similarity=0.255 Sum_probs=47.3
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCC--CC----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHE--PG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYD 130 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~--~~----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~ 130 (466)
.+|..+.++..+..++.+.|+|..+.. .+ .-.|+|.......+.+..- ........|.+|+|+
T Consensus 3 ~pP~~l~v~~~~~~~~~l~v~W~~P~~~~~~~~~~~y~v~~~~~~~~~~~~~~~-----------~~~~~~~~i~~L~p~ 71 (104)
T d1n26a3 3 DPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWMV-----------KDLQHHCVIHDAWSG 71 (104)
T ss_dssp CCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEEEEC-----------GGGCSEEEESSCCTT
T ss_pred cCCCCCEEEEEecCCCEEEEEEEeeeecCCCceeEEEEEEEeeCCCCceeeecc-----------ccceEEEEECCCCCC
Confidence 468888887655446789999997632 11 1356777665543322211 112235789999999
Q ss_pred CEEEEEecc
Q 012311 131 TKYYYKIGS 139 (466)
Q Consensus 131 T~Y~Yrv~~ 139 (466)
|.|.+||..
T Consensus 72 t~Y~~rVra 80 (104)
T d1n26a3 72 LRHVVQLRA 80 (104)
T ss_dssp CCEEEEEEE
T ss_pred CEEEEEEEE
Confidence 999999964
|
| >d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Myosin binding protein C, fast-type species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.71 E-value=0.0017 Score=50.09 Aligned_cols=72 Identities=14% Similarity=0.207 Sum_probs=46.3
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC-----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG-----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDT 131 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~-----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T 131 (466)
.+|..+.+.... .++++|+|.-+...+ .-.|+|....+..+..+.. .......++|+||+||+
T Consensus 3 ~~P~~~~v~~~~--~~sv~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~----------~~~~~~~~~v~~L~~~~ 70 (98)
T d1x5ya1 3 SAPQHLTVEDVT--DTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANK----------EPVERCGFTVKDLPTGA 70 (98)
T ss_dssp CCCEEEEEEEEC--SSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESSS----------SCBSSSEEEEECCCTTC
T ss_pred CCCcCcEEEEcc--CCEEEEEEECCCcCCCCCceEEEEEEEecCcceeEEeee----------ecCceeEEEECCCcCCe
Confidence 468888877543 579999998653322 2467787766544322110 11112246889999999
Q ss_pred EEEEEeccC
Q 012311 132 KYYYKIGSG 140 (466)
Q Consensus 132 ~Y~Yrv~~~ 140 (466)
.|.+||..-
T Consensus 71 ~Y~frV~A~ 79 (98)
T d1x5ya1 71 RILFRVVGV 79 (98)
T ss_dssp CEEEEEEEE
T ss_pred EEEEEEEEE
Confidence 999999763
|
| >d1cfba1 b.1.2.1 (A:610-709) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=96.70 E-value=0.0031 Score=48.40 Aligned_cols=71 Identities=17% Similarity=0.201 Sum_probs=44.3
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~ 132 (466)
.+|..+.++.+ .+++.|+|.-+...+ .-.|+|................. -...+.+.+|+|+|.
T Consensus 7 ~~P~~~~v~~~---~~sv~lsW~pp~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~L~p~t~ 74 (100)
T d1cfba1 7 NAPKLTGITCQ---ADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKVP---------NTDSSFVVQMSPWAN 74 (100)
T ss_dssp CCCEEEEEEEC---SSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEEEE---------TTCSEEEEECCSSEE
T ss_pred CcCcCcEEEEc---CCEEEEEEcCCcccccceEEEEEEEecCCCCceeeEEeeecC---------CceEEEEecCCCCCE
Confidence 46888888754 358999998664332 23677776554333222111110 012256789999999
Q ss_pred EEEEecc
Q 012311 133 YYYKIGS 139 (466)
Q Consensus 133 Y~Yrv~~ 139 (466)
|.+||..
T Consensus 75 Y~frV~A 81 (100)
T d1cfba1 75 YTFRVIA 81 (100)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999975
|
| >d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.68 E-value=0.0032 Score=50.04 Aligned_cols=85 Identities=21% Similarity=0.436 Sum_probs=52.3
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCC--CCCcE----EEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHE--PGPST----VSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYD 130 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~--~~~~~----V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~ 130 (466)
.+|+.|.+.... .+++.|+|..+.. ..... |+|....+. ..... ....+....+.|+||+|+
T Consensus 13 ~~P~~v~~~~~~--~~si~v~W~~p~~~~~ng~i~~Y~v~y~~~~~~------~~~~~----~~~~~~~~~~~i~~L~p~ 80 (119)
T d1x5ha1 13 AAPQNLSLEVRN--SKSIMIHWQPPAPATQNGQITGYKIRYRKASRK------SDVTE----TLVSGTQLSQLIEGLDRG 80 (119)
T ss_dssp CCCEEEEEECCS--SSEEEEEEECCCTTTCCSCEEEEBCEEEETTEE------EEEEC----CBCCTTCCEEEEECCCSS
T ss_pred CCCcCeEEEEec--CcEEEEEEEcccccCCCCCEEEEEEEEeecccc------cceee----eecCCCccEEEeCCCCCC
Confidence 458888877654 5799999987531 11123 444443321 00000 011223456789999999
Q ss_pred CEEEEEecc------CCccceEEEECCCC
Q 012311 131 TKYYYKIGS------GDSSREFWFQTPPK 153 (466)
Q Consensus 131 T~Y~Yrv~~------~~~s~~~~F~T~p~ 153 (466)
|.|.+||.. +.+|+...|+|++.
T Consensus 81 t~Y~~~V~A~n~~G~G~~S~~~~~~T~~~ 109 (119)
T d1x5ha1 81 TEYNFRVAALTINGTGPATDWLSAETFES 109 (119)
T ss_dssp CEEEEECEEEETTEEEEECCCEEEECCSS
T ss_pred CEEEEEEEEEcCCcCCCCCCCEEEEeCCC
Confidence 999999964 23678889999764
|
| >d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.63 E-value=0.0036 Score=47.72 Aligned_cols=73 Identities=14% Similarity=0.248 Sum_probs=46.2
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCC--CCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEP--GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYY 134 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~--~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~ 134 (466)
..|.++++....+ .+++.|+|.-+... ..-.|+|....+....... .. .......++|+||+|||.|.
T Consensus 3 ~PP~~l~v~~~~~-ts~i~v~W~~p~~~~i~~Y~v~y~~~~~~~~~~~~---~~------~~~~~~~~~i~~L~p~t~Y~ 72 (94)
T d1fnfa1 3 SPPTNLHLEANPD-TGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLE---EV------VHADQSSCTFDNLSPGLEYN 72 (94)
T ss_dssp CCCEEEEEEECSS-SSCEEEEEECCSCSSCCEEEEEEEETTTCSSCCEE---EE------ECTTCCEEECCCCCTTSCEE
T ss_pred CcCcCcEEEEecC-CCEEEEEeeCCCCCCeeEEEEEEEEecccCceEEE---EE------eCCCccEEEECCCCCCCEEE
Confidence 3588998875533 35689999876432 2346788866543221110 01 11223468999999999999
Q ss_pred EEecc
Q 012311 135 YKIGS 139 (466)
Q Consensus 135 Yrv~~ 139 (466)
.+|..
T Consensus 73 v~V~a 77 (94)
T d1fnfa1 73 VSVYT 77 (94)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99965
|
| >d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.63 E-value=0.0055 Score=47.66 Aligned_cols=70 Identities=17% Similarity=0.289 Sum_probs=39.0
Q ss_pred CCcEEEEEEcCCCCCCc----EEEEeecCCC-CceEEEeEEEEe-eeeccccceEEEEEecCCCCCCEEEEEeccC
Q 012311 71 GKAVIISWVTPHEPGPS----TVSYGTSADK-FDFTAEGTVNNY-TFYKYKSGYIHQCLVDGLEYDTKYYYKIGSG 140 (466)
Q Consensus 71 ~~~~~V~W~t~~~~~~~----~V~yg~~~~~-~~~~a~g~~~~y-~~~~~~~~~~h~v~l~gL~P~T~Y~Yrv~~~ 140 (466)
.+++.|+|.-+...+.. .|+|...... .+..+......- ............++|+||+|+|+|.+||..-
T Consensus 13 ~~sv~l~W~~P~~~g~~I~~Y~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frV~A~ 88 (107)
T d2ic2a1 13 DESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTYRFRILAV 88 (107)
T ss_dssp ---EEEEEEEECCSSCCEEEEEEEEEECC---CCEEEEEEEECCSCSCSSSSEEEEEEEECSCCSSEEEEEEEEEE
T ss_pred CCEEEEEEEeCccccCCceEEEEEEEeccCCCcceEEEeeeeccceeeeecccceeEEEECCCcCCcEEEEEEEEE
Confidence 57999999987644433 4666654432 222322221110 0011233455678999999999999999763
|
| >d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.63 E-value=0.0055 Score=45.66 Aligned_cols=68 Identities=13% Similarity=0.257 Sum_probs=45.0
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCCC-CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEEE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEPG-PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~~-~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Yr 136 (466)
+|..++++.-. .+++.|+|.-+...- .-.|+|....... ... .. +.....++|+||+|+|+|.++
T Consensus 2 aP~~l~v~~~t--~~sv~v~W~~p~~~~~~Y~v~~~~~~~~~-~~~-----~~------~~~~~~~~~~~L~p~t~Y~v~ 67 (87)
T d1qr4a1 2 NPKDLEVSDPT--ETTLSLRWRRPVAKFDRYRLTYVSPSGKK-NEM-----EI------PVDSTSFILRGLDAGTEYTIS 67 (87)
T ss_dssp CCEEEEEESCC--SSEEEEEEECCSSCCSEEEEEEECTTCCE-EEE-----EE------CTTCSEEEEESCCSSCEEEEE
T ss_pred cCcCcEEEEec--CCEEEEEEECCCCCcceeEEEeecCCcce-eEE-----eC------CCCcCEEEECCCCcCCEEEEE
Confidence 58888887543 579999999765332 3477787655321 111 11 112235789999999999999
Q ss_pred ecc
Q 012311 137 IGS 139 (466)
Q Consensus 137 v~~ 139 (466)
|..
T Consensus 68 V~a 70 (87)
T d1qr4a1 68 LVA 70 (87)
T ss_dssp EEE
T ss_pred EEE
Confidence 964
|
| >d1axib2 b.1.2.1 (B:131-236) Growth hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Growth hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.61 E-value=0.0016 Score=51.01 Aligned_cols=82 Identities=16% Similarity=0.226 Sum_probs=50.3
Q ss_pred CCceEEEeeecC----CCCcEEEEEEcCCCCC--------CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEec
Q 012311 58 SPQQVHITQGDY----DGKAVIISWVTPHEPG--------PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVD 125 (466)
Q Consensus 58 ~P~qv~lt~~~~----~~~~~~V~W~t~~~~~--------~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~ 125 (466)
.|..+.++.... ...++.|+|.-+.... .-.|+|....+..+..... ..-..++|+
T Consensus 3 PP~~l~~t~~~~s~~~~~~~v~vsW~pP~~~~~~~~~~~l~Y~v~y~~~~~~~w~~~~~------------~~~~~~~i~ 70 (106)
T d1axib2 3 PPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMMDP------------ILTTSVPVY 70 (106)
T ss_dssp CCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSSCEECCC------------BSSSEEEEE
T ss_pred CCCCceeeEeeeccccccCeEEEEEcCCCccCCCCCeeEEEEEEeeeecCCccceeeee------------cccceEEEC
Confidence 577777765432 1246999999763211 1356777666544432211 111357899
Q ss_pred CCCCCCEEEEEecc--------CCccceEEEECC
Q 012311 126 GLEYDTKYYYKIGS--------GDSSREFWFQTP 151 (466)
Q Consensus 126 gL~P~T~Y~Yrv~~--------~~~s~~~~F~T~ 151 (466)
+|+|+|.|.+||.. +.||+...++||
T Consensus 71 ~L~~~t~Y~frVRa~~~~~g~ws~wS~~v~v~~P 104 (106)
T d1axib2 71 SLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP 104 (106)
T ss_dssp EEETTSCEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred CCCCCCEEEEEEEEEECCCCCCCCCCCCEEEECC
Confidence 99999999999954 135666666664
|
| >d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.58 E-value=0.0058 Score=45.51 Aligned_cols=68 Identities=15% Similarity=0.260 Sum_probs=45.6
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCCC-CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEEE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEPG-PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~~-~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Yr 136 (466)
+|..+.++... .+++.|+|..+...- .-.|+|....+... ... . ..-.-+++|+||+|||.|.++
T Consensus 3 ~P~nl~v~~~~--~~s~~l~W~~p~~~~~~Y~v~~~~~~~~~~-~~~-----~------~~~~~~~~~~~L~p~t~Y~v~ 68 (86)
T d1tdqa3 3 SPRDLMVTASS--ETSISLIWTKASGPIDHYRITFTPSSGISS-EVT-----V------PRDRTSYTLTDLEPGAEYIIS 68 (86)
T ss_dssp CCEEEEEEEEC--SSCEEEEEECCCSCCSEEEEEEECSSSCCE-EEE-----E------ESSCSEEEECCCCTTCCEEEE
T ss_pred cCCCCEEEEec--CCEEEEEEeCCCCCccceEEEEecccccce-EEE-----e------CCCccEEEECCCccccEEEEE
Confidence 58888887653 579999998875332 34788876554221 111 0 111225799999999999999
Q ss_pred ecc
Q 012311 137 IGS 139 (466)
Q Consensus 137 v~~ 139 (466)
|..
T Consensus 69 V~a 71 (86)
T d1tdqa3 69 ITA 71 (86)
T ss_dssp EEE
T ss_pred EEE
Confidence 975
|
| >d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.55 E-value=0.0015 Score=50.38 Aligned_cols=75 Identities=19% Similarity=0.329 Sum_probs=44.3
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCCCC----cEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEPGP----STVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~~~----~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y 133 (466)
+|+.+.+.... .+++.|+|.-+...+. -.|+|.......... +....... ...-...++|.||+|+|.|
T Consensus 5 ~P~~~~~~~~~--~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~~L~p~t~Y 77 (103)
T d1qg3a2 5 EPGRLAFNVVS--STVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPI--GPMKKVLV---DNPKNRMLLIENLRESQPY 77 (103)
T ss_dssp CCCCCEEEEEE--TTEEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBC--SCCEEEEE---CCTTCCEEEECCCCTTCCE
T ss_pred cCCCcEEEEec--CCEEEEEEEECccCCCCceEEEEEeeccccccccc--cceEEEEe---cCCCceEEEEeecCCCCEE
Confidence 58888776654 5799999997644322 256666554322110 00001000 1112246789999999999
Q ss_pred EEEecc
Q 012311 134 YYKIGS 139 (466)
Q Consensus 134 ~Yrv~~ 139 (466)
.+||..
T Consensus 78 ~~~V~A 83 (103)
T d1qg3a2 78 RYTVKA 83 (103)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999975
|
| >d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.50 E-value=0.0033 Score=50.42 Aligned_cols=79 Identities=16% Similarity=0.191 Sum_probs=48.0
Q ss_pred CCcEEEEEEcCCCCC---CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEEEecc------CC
Q 012311 71 GKAVIISWVTPHEPG---PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGS------GD 141 (466)
Q Consensus 71 ~~~~~V~W~t~~~~~---~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Yrv~~------~~ 141 (466)
++++.|+|.-+...+ .-.|.|......-.. +...... ........++|.||+|+|.|.+||.. +.
T Consensus 29 ~tsi~v~W~~p~~~~~i~gY~v~y~~~~~~~~~---~~~~~~~---v~~~~~~s~~i~~L~p~t~Y~f~V~A~n~~G~G~ 102 (120)
T d1ujta_ 29 PTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQAT---SSWQNLD---AKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGM 102 (120)
T ss_dssp TTEEEEEEEESSCCSSCCEEEEEEEESSSSSTT---TCCEEEE---CCCTTCCEEEEESCCSSEEEEEEEEEESSSCCCC
T ss_pred CCeEEEEecCCCCCCcEEEEEEEeeecccCCCC---cceEEEE---eccCceeEEEECCCCCCCEEEEEEEEEeCCcCcC
Confidence 589999998764222 246778765432110 0000000 01223345689999999999999854 24
Q ss_pred ccceEEEECCCCCC
Q 012311 142 SSREFWFQTPPKID 155 (466)
Q Consensus 142 ~s~~~~F~T~p~~g 155 (466)
.|+...|+|++..+
T Consensus 103 ~S~~~~~~T~e~~~ 116 (120)
T d1ujta_ 103 DSESKTVRTTEESG 116 (120)
T ss_dssp CCCCEEEEECSSCC
T ss_pred CCCCEEEEeCCCCc
Confidence 57788999987543
|
| >d1fnha3 b.1.2.1 (A:183-271) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.48 E-value=0.0031 Score=47.20 Aligned_cols=70 Identities=14% Similarity=0.250 Sum_probs=45.3
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCC-CCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEEE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~-~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Yr 136 (466)
+|..+.+..-. .+++.|+|.-+... ..-.|+|....+..... . .....-...++|+||+|||.|.+|
T Consensus 3 aP~nl~v~~~~--~~s~~l~W~~p~~~i~~Y~i~~~~~~~~~~~~------~----~~~~~~~~~~~~~~L~p~t~Y~~~ 70 (89)
T d1fnha3 3 APSNLRFLATT--PNSLLVSWQPPRARITGYIIKYEKPGSPPREV------V----PRPRPGVTEATITGLEPGTEYTIY 70 (89)
T ss_dssp CCEEEEEEEEE--TTEEEEEEECCSSCCSEEEEEEECTTSCCEEC------T----TCCCTTCCEEEEESCCTTCEEEEE
T ss_pred cCcCCEEEEec--CCEEEEEEeCCCcCCceEEEEEeeccCCccEE------E----EEcCCCccEEEEEeeeCCCEEEEE
Confidence 58888887554 57999999876433 23467787655422100 0 001122335789999999999999
Q ss_pred ecc
Q 012311 137 IGS 139 (466)
Q Consensus 137 v~~ 139 (466)
|..
T Consensus 71 V~a 73 (89)
T d1fnha3 71 VIA 73 (89)
T ss_dssp EEE
T ss_pred EEE
Confidence 965
|
| >d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.42 E-value=0.0039 Score=49.34 Aligned_cols=83 Identities=13% Similarity=0.274 Sum_probs=48.9
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~ 132 (466)
.+|..+.+.... .+++.|+|.-+...+ .-.|+|............ ... ........|+||+|+|.
T Consensus 22 ~~P~~~~~~~~~--~~sv~v~W~~P~~~~g~i~~Y~i~y~~~~~~~~~~~~---~~~------~~~~~~~~i~~L~p~t~ 90 (117)
T d1wfoa1 22 GPPMGILFPEVR--TTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATV---EVL------APSARQYTATGLKPESV 90 (117)
T ss_dssp CCCCCCEEEEEC--SSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCCCE---EEE------CTTCCEEEEESCCSSSE
T ss_pred cCCCCcEEEEec--CCEEEEEEECCCCCCCceEEEeeeeeeccCCCceEeE---Eec------CCceEEEEECCCCCCCE
Confidence 457777776543 579999997654332 235777665543221110 010 11122457899999999
Q ss_pred EEEEeccC------CccceEEEEC
Q 012311 133 YYYKIGSG------DSSREFWFQT 150 (466)
Q Consensus 133 Y~Yrv~~~------~~s~~~~F~T 150 (466)
|.+||..- .+|+...++|
T Consensus 91 Y~~~V~A~n~~G~g~~S~~~~~tT 114 (117)
T d1wfoa1 91 YLFRITAQTRKGWGEAAEALVVTT 114 (117)
T ss_dssp EEEEEEEECSSCEEEEEEEEEECC
T ss_pred EEEEEEEECCCcCCCCcCCEEEEC
Confidence 99999752 2445555555
|
| >d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.37 E-value=0.0071 Score=45.57 Aligned_cols=70 Identities=19% Similarity=0.367 Sum_probs=44.8
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCC-CCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEEE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~-~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Yr 136 (466)
+|.++.++--. .+++.|+|.-+... ..-.++|....+... ... .........++|+||+|||.|.+|
T Consensus 4 ~P~~l~v~~vt--~~sv~l~W~~p~~~~~~y~i~~~~~~~~~~-------~~~---~~~~~~~~~~~i~~L~p~t~Y~~~ 71 (94)
T d1j8ka_ 4 RPKGLAFTDVD--VDSIKIAWESPQGQVSRYRVTYSSPEDGIH-------ELF---PAPDGEEDTAELQGLRPGSEYTVS 71 (94)
T ss_dssp CCCCCEEEEEE--TTEEEEECCCCSSCCSCEEEEEEETTTEEE-------EEC---CCCCSSCCEEEECSCCCCSEEEEE
T ss_pred CCCCCEEEEec--CCEEEEEEeCCCccccceEEEEEeecCCCc-------eEE---EecCCCccEEEECCCCCCCEEEEE
Confidence 47788776443 57999999865432 344677776654211 000 011223446789999999999999
Q ss_pred ecc
Q 012311 137 IGS 139 (466)
Q Consensus 137 v~~ 139 (466)
|..
T Consensus 72 V~a 74 (94)
T d1j8ka_ 72 VVA 74 (94)
T ss_dssp EEE
T ss_pred EEE
Confidence 965
|
| >d1wfua_ b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.26 E-value=0.0053 Score=48.77 Aligned_cols=34 Identities=24% Similarity=0.300 Sum_probs=27.2
Q ss_pred EEEecCCCCCCEEEEEeccC------CccceEEEECCCCC
Q 012311 121 QCLVDGLEYDTKYYYKIGSG------DSSREFWFQTPPKI 154 (466)
Q Consensus 121 ~v~l~gL~P~T~Y~Yrv~~~------~~s~~~~F~T~p~~ 154 (466)
.++|++|+|+|.|.+||..- .+|+...|+|.+..
T Consensus 76 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~ 115 (120)
T d1wfua_ 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRES 115 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCCC
T ss_pred EEeCCCCCCCcEeeEEEEEEeCCcEeCCCCCEEEEeCCCC
Confidence 36789999999999999752 35778889997654
|
| >d1bpva_ b.1.2.1 (A:) Type I titin module {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Type I titin module species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.26 E-value=0.003 Score=48.76 Aligned_cols=70 Identities=17% Similarity=0.254 Sum_probs=41.9
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCCC-----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEPG-----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~~-----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~ 132 (466)
.|.++.+.... .+++.|+|.-+...+ .-.++|.......+..+. ........++++||+|+|+
T Consensus 5 pP~~p~~~~~t--~~sv~lsW~~P~~~~g~~i~~y~~~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~ 72 (104)
T d1bpva_ 5 PPGKPVPLNIT--RHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKAN----------FSNILENEFTVSGLTEDAA 72 (104)
T ss_dssp CCCCCEEEEEE--TTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECC----------CSCCCSSEEEECSCCSSCC
T ss_pred CCCCCEEEEec--CCEEEEEEEeccccCcceEEEEEEEeecccccceeEEE----------eeccceeEEEEcCCCCCCE
Confidence 35555544332 479999998653222 246677765543322211 0111223468899999999
Q ss_pred EEEEecc
Q 012311 133 YYYKIGS 139 (466)
Q Consensus 133 Y~Yrv~~ 139 (466)
|.|||..
T Consensus 73 Y~frV~A 79 (104)
T d1bpva_ 73 YEFRVIA 79 (104)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999975
|
| >d1wk0a_ b.1.2.1 (A:) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.24 E-value=0.0064 Score=49.46 Aligned_cols=33 Identities=21% Similarity=0.230 Sum_probs=27.4
Q ss_pred EEEecCCCCCCEEEEEecc------CCccceEEEECCCC
Q 012311 121 QCLVDGLEYDTKYYYKIGS------GDSSREFWFQTPPK 153 (466)
Q Consensus 121 ~v~l~gL~P~T~Y~Yrv~~------~~~s~~~~F~T~p~ 153 (466)
.++|+||+|+|.|.+||.. +.+|+...|+|++.
T Consensus 83 ~~~i~~L~P~t~Y~f~V~A~n~~G~g~~S~~~~~~T~~~ 121 (137)
T d1wk0a_ 83 NITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSC 121 (137)
T ss_dssp EEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCS
T ss_pred EEEECCCCCCcEEEEEEEEEcCCcccCCCCCEEEECCCC
Confidence 5789999999999999964 24678888999864
|
| >d2fnba_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.22 E-value=0.0043 Score=47.00 Aligned_cols=69 Identities=9% Similarity=0.100 Sum_probs=42.6
Q ss_pred CceEEEeeecCCCCcEEEEEEcCCCC--CCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEEE
Q 012311 59 PQQVHITQGDYDGKAVIISWVTPHEP--GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYK 136 (466)
Q Consensus 59 P~qv~lt~~~~~~~~~~V~W~t~~~~--~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Yr 136 (466)
|..+.+... ..+++.|+|.-+... ..-.|+|....+...... . . ...-...++|+||+|||.|.++
T Consensus 9 P~~l~v~~~--t~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~-~---~------~~~~~t~~~i~~L~p~t~Y~~~ 76 (95)
T d2fnba_ 9 LTDLSFVDI--TDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFE-D---F------VDSSVGYYTVTGLEPGIDYDIS 76 (95)
T ss_dssp CTTCEEECC--CSSCEEEECCCCCCSSCCEEEEEEEEETSCCEEEE-E---E------CCSSCSEEEECCCCTTSEEEEE
T ss_pred CCCeEEEEE--cCCEEEEEEEecCCceEEeEEEEEEEeeccceEEE-E---E------eCCCCeEEEEecccCCEEEEEE
Confidence 667776644 358999999765422 123577766543322111 0 0 1122335789999999999999
Q ss_pred ecc
Q 012311 137 IGS 139 (466)
Q Consensus 137 v~~ 139 (466)
|..
T Consensus 77 V~a 79 (95)
T d2fnba_ 77 VIT 79 (95)
T ss_dssp EEE
T ss_pred EEE
Confidence 965
|
| >d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase F, PTPRF species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.11 E-value=0.012 Score=44.31 Aligned_cols=58 Identities=17% Similarity=0.351 Sum_probs=37.5
Q ss_pred CCcEEEEEEcCCCCC----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEEEecc
Q 012311 71 GKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGS 139 (466)
Q Consensus 71 ~~~~~V~W~t~~~~~----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Yrv~~ 139 (466)
.+++.|+|.-+...+ .-.|+|............ + .......+|+||+|+|.|.+||..
T Consensus 13 ~~sv~l~W~pP~~~~g~i~~Y~i~~~~~~~~~~~~~~-----~------~~~~~~~~i~~L~p~t~Y~~~V~A 74 (94)
T d2dn7a1 13 MNTALLQWHPPKELPGELLGYRLQYCRADEARPNTID-----F------GKDDQHFTVTGLHKGTTYIFRLAA 74 (94)
T ss_dssp TTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEEEE-----E------ETTCCEEEEECCCTTCEEEEEEEE
T ss_pred CCEEEEEEeCCCCCCCceEEEEEEEEEcCCCCcEEEE-----c------CCCccEEEEEccCCeeEEEEEEEE
Confidence 579999999764332 235777766544333221 1 111234578999999999999975
|
| >d1x5ia1 b.1.2.1 (A:8-120) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.98 E-value=0.0075 Score=47.34 Aligned_cols=82 Identities=15% Similarity=0.248 Sum_probs=50.6
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~ 132 (466)
.+|..+++..+ .+++.|+|.-+...+ .-.|+|+..... .... . .......++|.+|+|+|.
T Consensus 22 ~~P~~~~~~~~---~~si~v~W~~p~~~~g~i~~Y~i~~~~~~~~-~~~~-----~------~~~~~~~~~i~~L~p~t~ 86 (113)
T d1x5ia1 22 EVPSSLHVRPL---VTSIVVSWTPPENQNIVVRGYAIGYGIGSPH-AQTI-----K------VDYKQRYYTIENLDPSSH 86 (113)
T ss_dssp CSCSEEEEEEE---TTEEEEEEECCSCTTBCCCEEEEEECSSCGG-GEEE-----E------CCTTCCEEEECSCCSSCE
T ss_pred CCCEeeeeeeC---CCEEEEEEEccccCCccEEEEEEEeeecccc-ceee-----e------eeCCccEEEEeccccCcE
Confidence 46888888765 368999999664332 235666654432 1111 1 112234568999999999
Q ss_pred EEEEeccC---Cccc--eEEEECCCC
Q 012311 133 YYYKIGSG---DSSR--EFWFQTPPK 153 (466)
Q Consensus 133 Y~Yrv~~~---~~s~--~~~F~T~p~ 153 (466)
|.+||..- +.++ .-.++|.|.
T Consensus 87 Y~~~V~A~n~~G~g~~~~~~~~T~P~ 112 (113)
T d1x5ia1 87 YVITLKAFNNVGEGIPLYESAVTRPH 112 (113)
T ss_dssp ECCEEEEECSSCBCCCCCCCEECCCC
T ss_pred EEEEEEEECCCcCCCCeeeEEEeCCC
Confidence 99999652 2222 236778764
|
| >d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.88 E-value=0.011 Score=46.73 Aligned_cols=69 Identities=16% Similarity=0.168 Sum_probs=40.8
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCCC----CcEEEEeecCCCC-ceEEEeEEEEeeeeccccceEEEEEecCCCCCCE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKF-DFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTK 132 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~~----~~~V~yg~~~~~~-~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~ 132 (466)
+|.++.+.... .+++.|+|.-+...+ .-.|+|....... +..+.-. . ....++|+||+|+|.
T Consensus 18 pP~~~~v~~~~--~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~---------~--~~~~~~v~~L~p~t~ 84 (117)
T d1uema_ 18 PPSKPQVTDVT--KNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVANH---------V--KTTLYTVRGLRPNTI 84 (117)
T ss_dssp CCCCCEEEEEC--SSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEEEEE---------E--CSSEEEECSCCTTCE
T ss_pred CCCCCEEEEcc--CCEEEEEEECCCcCCCCeEEEEEEEeccCCceeeEEeccc---------c--ccccceECCCCCCCE
Confidence 47777776443 579999997443222 2356666544321 1111100 0 112467999999999
Q ss_pred EEEEecc
Q 012311 133 YYYKIGS 139 (466)
Q Consensus 133 Y~Yrv~~ 139 (466)
|.+||..
T Consensus 85 Y~frV~A 91 (117)
T d1uema_ 85 YLFMVRA 91 (117)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999965
|
| >d2cuia1 b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.81 E-value=0.0041 Score=47.61 Aligned_cols=76 Identities=13% Similarity=0.174 Sum_probs=44.3
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCC-CCcEEEEeecCCCCceEEE--eEEEEeeeeccccceEEEEEecCCCCCCEEE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAE--GTVNNYTFYKYKSGYIHQCLVDGLEYDTKYY 134 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~-~~~~V~yg~~~~~~~~~a~--g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~ 134 (466)
.|.+++++-. ..+++.|+|..+... ....|+|............ ....... ..+.....+|.||+|+|+|.
T Consensus 6 ~~~~l~v~~~--t~~sv~v~W~pp~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~v~~L~p~t~Y~ 79 (101)
T d2cuia1 6 RLSQLSVTDV--TTSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQRELM----VPGTRHSAVLRDLRSGTLYS 79 (101)
T ss_dssp CCCCCEEESC--CSSCEEEECCCCTTSCSEEEEEEECCCCSSSCCCSSCCCCEEEE----EETTCCEEEECSCCTTCEEE
T ss_pred CCCCcEEEEE--CCCEEEEEEEeccccccceEEEEEecCCCceeeccCCcceeEee----cccceeEEEeCCCCcCCEEE
Confidence 4667777654 367999999655322 2357778765432211100 0000100 12233456889999999999
Q ss_pred EEecc
Q 012311 135 YKIGS 139 (466)
Q Consensus 135 Yrv~~ 139 (466)
++|..
T Consensus 80 ~~V~a 84 (101)
T d2cuia1 80 LTLYG 84 (101)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99975
|
| >d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.69 E-value=0.011 Score=45.57 Aligned_cols=70 Identities=14% Similarity=0.176 Sum_probs=42.6
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCCC----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~~----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y 133 (466)
+|..+.+.-.. .+++.|+|..+...+ .-.|+|........... .. ........+|+||+|+|.|
T Consensus 13 ~p~~l~~~~~~--~~sv~l~W~~P~~~ng~i~~Y~i~~~~~~~~~~~~~----~~------~~~~~~~~~i~~L~p~t~Y 80 (106)
T d1wfna1 13 PVGHLSFSEIL--DTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRVT----HY------LPNVTLEYRVTGLTALTTY 80 (106)
T ss_dssp CCSCCEEESCC--SSEEEEECCCCTTCCSCCCEEEEEEEESSCGGGCCC----EE------ECSSCCEEEEESCCTTCEE
T ss_pred CCCCcEEEEec--CCEEEEEEECCCCCCCcEEeEEEEEEECCCCcceEE----Ee------cCCCeeEEEEccCCCCCEE
Confidence 57777766443 579999998654332 23566765543221100 00 1112235689999999999
Q ss_pred EEEecc
Q 012311 134 YYKIGS 139 (466)
Q Consensus 134 ~Yrv~~ 139 (466)
.+||..
T Consensus 81 ~~~V~A 86 (106)
T d1wfna1 81 TIEVAA 86 (106)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999965
|
| >d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.44 E-value=0.012 Score=44.05 Aligned_cols=59 Identities=17% Similarity=0.319 Sum_probs=37.7
Q ss_pred CCcEEEEEEcCCCC-CCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEEEecc
Q 012311 71 GKAVIISWVTPHEP-GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGS 139 (466)
Q Consensus 71 ~~~~~V~W~t~~~~-~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Yrv~~ 139 (466)
.+++.|+|..+... ..-.|+|....+...... ... +.-...+.|+||+|||.|.++|..
T Consensus 10 ~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~----~~~------~~~~t~~~l~~L~p~t~Y~~~V~a 69 (91)
T d1fnaa_ 10 PTSLLISWDAPAVTVRYYRITYGETGGNSPVQE----FTV------PGSKSTATISGLKPGVDYTITVYA 69 (91)
T ss_dssp SSCEEEECCCCSSCCSEEEEEEEETTCCSCCEE----EEE------ETTCCEEEECSCCTTCEEEEEEEE
T ss_pred CCEEEEEEEccceEecEEEEEEEcCCCCceeEE----EEe------CCCccEEEeCCCCCCCEEEEEEEE
Confidence 57999999765432 235788877654332111 000 111235789999999999999964
|
| >d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=95.16 E-value=0.034 Score=42.65 Aligned_cols=72 Identities=18% Similarity=0.173 Sum_probs=44.3
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCC--CC----CCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPH--EP----GPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYD 130 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~--~~----~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~ 130 (466)
..|..|.+.... .+++.|+|.-.. .. ..-.|+|........... ... .......++|.+|+|+
T Consensus 6 ~~P~~v~~~~~~--~~si~v~W~p~~~~~~ng~i~~Y~I~y~~~~~~~~~~~----~~~-----~~~~~~~~~i~~L~p~ 74 (105)
T d1cfba2 6 KNPDNVVGQGTE--PNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWEN----NNI-----FDWRQNNIVIADQPTF 74 (105)
T ss_dssp CCCSCCEEECSS--TTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEE----EEE-----CCTTCCEEEECSCCSS
T ss_pred CCCcCeEEEEcc--CCeEEEEEeCCChhhcCceEEEEEEEeeeeccccceeE----EEe-----cCCCccEEEECCCCCC
Confidence 468888877553 579999996421 11 123577776543322111 000 1223346789999999
Q ss_pred CEEEEEecc
Q 012311 131 TKYYYKIGS 139 (466)
Q Consensus 131 T~Y~Yrv~~ 139 (466)
|.|.+||..
T Consensus 75 t~Y~~~V~A 83 (105)
T d1cfba2 75 VKYLIKVVA 83 (105)
T ss_dssp CEEEEEEEE
T ss_pred CEEEEEEEE
Confidence 999999975
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Probab=95.02 E-value=0.0088 Score=52.68 Aligned_cols=64 Identities=22% Similarity=0.216 Sum_probs=38.7
Q ss_pred EEEEEccCCCCCCcHH-HHHHHHH-hCCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCceee
Q 012311 161 KFGIIGDLGQTYNSLS-TLEHYME-SGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEIE 236 (466)
Q Consensus 161 ~f~v~GD~g~~~~~~~-tl~~~~~-~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~~ 236 (466)
|++++||.|....... .|+.+.. ...|-++++||++.. .+. . .+.++ +....-+..+.||||..
T Consensus 14 rI~vIgDIHG~~~~L~~lL~~i~~~~~~d~lv~lGD~vDr--Gp~----s-----~~vl~-~l~~~~~~~i~GNHE~~ 79 (219)
T d1g5ba_ 14 NIWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDR--GAE----N-----VECLE-LITFPWFRAVRGNHEQM 79 (219)
T ss_dssp CEEEECCCTTCHHHHHHHHHHHTCCTTTCEEEECSCCSSS--SSC----H-----HHHHG-GGGSTTEEECCCHHHHH
T ss_pred eEEEEEecccCHHHHHHHHHHcCCCCCCCEEEEeCCcccc--Ccc----H-----HHHHH-HhhccccccccCcHHHH
Confidence 7899999996543322 2233321 255899999999943 221 1 12222 22345578999999964
|
| >d2gysa4 b.1.2.1 (A:317-416) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.71 E-value=0.015 Score=44.31 Aligned_cols=68 Identities=18% Similarity=0.327 Sum_probs=37.9
Q ss_pred CceEEEeeecCCCCcEEEEEEcCCCCC-----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEE
Q 012311 59 PQQVHITQGDYDGKAVIISWVTPHEPG-----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (466)
Q Consensus 59 P~qv~lt~~~~~~~~~~V~W~t~~~~~-----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y 133 (466)
|..|+++.+ .+++.|+|..+.... .-.|+|....+.-....... ..-...++|.+|+|+|.|
T Consensus 8 Pp~l~v~~~---~~s~~l~W~~P~~~~~~~~~~Y~v~y~~~~~~~~~~~~~~----------~~~~~~~~l~~L~p~t~Y 74 (100)
T d2gysa4 8 PPSLQVTKD---GDSYSLRWETMKMRYEHIDHTFEIQYRKDTATWKDSKTET----------LQNAHSMALPALEPSTRY 74 (100)
T ss_dssp CCEEEEC------CCCEEEEEC--------CEEEEEEEECSSSCSTTSCEEE----------EESCSEEECCCCCSSCCC
T ss_pred CCccEEEEC---CCEEEEEEecCcccCCccceEEEEEEeecccceeceeecc----------cCCceEEEeCCCCCCCeE
Confidence 445766654 368999999875332 24677776544321110000 001235789999999999
Q ss_pred EEEecc
Q 012311 134 YYKIGS 139 (466)
Q Consensus 134 ~Yrv~~ 139 (466)
.+||..
T Consensus 75 ~~rVRa 80 (100)
T d2gysa4 75 WARVRV 80 (100)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999964
|
| >d1wj3a_ b.1.2.1 (A:) Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Contactin 3 (KIAA1496) species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.63 E-value=0.055 Score=42.28 Aligned_cols=68 Identities=18% Similarity=0.187 Sum_probs=38.8
Q ss_pred CCcEEEEEEcCC--CCC----CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEEEecc-----
Q 012311 71 GKAVIISWVTPH--EPG----PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYYKIGS----- 139 (466)
Q Consensus 71 ~~~~~V~W~t~~--~~~----~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Yrv~~----- 139 (466)
.+++.|.|.... ..+ .-.|+|............. . . ...+.+|+|+|.|.+||..
T Consensus 31 ~~~i~v~W~~~~~~~~~g~i~~Y~v~y~~~~~~~~~~~~~-----------~-~--~~~~~~L~p~t~Y~~~V~A~n~~G 96 (117)
T d1wj3a_ 31 DTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQVLNT-----------N-K--TSAELVLPIKEDYIIEVKATTDGG 96 (117)
T ss_dssp TTEEEEECCCCCCCSSSCCEEEEEEEEEESSCSSCEEEEE-----------S-S--SEEEEECCCSSCEEEEEEEEESSC
T ss_pred CCEEEEEEeecccccCCCceeEEEEEEEecCCCceeeeec-----------e-e--eEEEeeccCCcEEEEEEEEEcCCc
Confidence 468999998642 221 1256666555433222111 0 0 1245689999999999964
Q ss_pred -CCccceEEEECCC
Q 012311 140 -GDSSREFWFQTPP 152 (466)
Q Consensus 140 -~~~s~~~~F~T~p 152 (466)
+..|+...+.+..
T Consensus 97 ~G~~S~~v~v~~~~ 110 (117)
T d1wj3a_ 97 DGTSSEQIRIPRIT 110 (117)
T ss_dssp CCCBCCCEEECCCC
T ss_pred cCCCCCCEEEeccC
Confidence 2456665664443
|
| >d1cd9b1 b.1.2.1 (B:1-107) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.62 E-value=0.067 Score=40.94 Aligned_cols=80 Identities=9% Similarity=0.017 Sum_probs=45.9
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC---CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG---PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~---~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y 133 (466)
.+|+.|..... ...++|+++|.-+...+ ...+.|............-..... .........+.+++|+|+|.|
T Consensus 6 ~~P~~v~~i~~-~~~~sv~~sW~p~~d~~~~~~y~~~y~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~L~~~t~Y 81 (107)
T d1cd9b1 6 ASPSNLSCLMH-LTTNSLVCQWEPGPETHLPTSFILKSFRSRADCQYQGDTIPDCV---AKKRQNNCSIPRKNLLLYQYM 81 (107)
T ss_dssp CCCEEEEEEEE-TTTTEEEEEEECCSCCSSCCEEEEEEEECCGGGCSCCCEEEEEE---CCTTCCEEEEEGGGCCTTSCE
T ss_pred CCCcCCEEEEe-cCCCEEEEEEcCCCCCCCCcceeEEEEEeecccceeeeeeeeec---cccCccccEEEcCCCCcCceE
Confidence 46888873222 23579999998664333 235566554432211110000000 112345567889999999999
Q ss_pred EEEeccC
Q 012311 134 YYKIGSG 140 (466)
Q Consensus 134 ~Yrv~~~ 140 (466)
.+||...
T Consensus 82 ~frV~A~ 88 (107)
T d1cd9b1 82 AIWVQAE 88 (107)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999864
|
| >d2dtge1 b.1.2.1 (E:808-909) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.60 E-value=0.00096 Score=51.95 Aligned_cols=83 Identities=19% Similarity=0.278 Sum_probs=47.5
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCCCCcEEEEee----cCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEPGPSTVSYGT----SADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~~~~~V~yg~----~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y 133 (466)
.|..|.+.... .+++.|+|..+...+...+.|.. ..+.... .... .......+.+.|.+|+|++ |
T Consensus 7 ~P~~v~~~~~~--~~sv~l~W~pP~~~ng~i~~Y~v~y~~~~~~~~~----~~~~----~~~~~~~~~~~~~~L~~~t-Y 75 (102)
T d2dtge1 7 IVGPVTHEIFE--NNVVHLMWQEPKEPNGLIVLYEVSYRRYGDEELH----LCDT----RKHFALERGCRLRGLSPGN-Y 75 (102)
T ss_dssp CCCCCCCCSSS--SSCCCCCCCCCCSCSSCEEEECCCCBSSSBCCCC----CCCC----SSSCCCTTCCCCCSCCSSE-E
T ss_pred CCCCCEEEEEC--CCEEEEEEEeCCCCcceEEEeeeEEEecCCCCce----eeee----eecccceEEEEEeccceee-E
Confidence 45555554443 57899999876554444555543 2211110 0000 0112234557889999975 9
Q ss_pred EEEecc------CCccceEEEECC
Q 012311 134 YYKIGS------GDSSREFWFQTP 151 (466)
Q Consensus 134 ~Yrv~~------~~~s~~~~F~T~ 151 (466)
.+||.. +.+|+...|.|+
T Consensus 76 ~~rV~A~n~~G~g~~S~~v~f~~~ 99 (102)
T d2dtge1 76 SVRIRATSLAGNGSWTEPTYFYVT 99 (102)
T ss_dssp CCCCCEEETTBCCCCCCCCEECCC
T ss_pred EEEEEEEcCCccCCCCCCEEEEcc
Confidence 999864 346777788774
|
| >d2dtge3 b.1.2.1 (E:468-592) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.17 E-value=0.0059 Score=48.77 Aligned_cols=34 Identities=24% Similarity=0.154 Sum_probs=24.9
Q ss_pred eEEEEEecCCCCCCEEEEEeccC-----------CccceEEEECC
Q 012311 118 YIHQCLVDGLEYDTKYYYKIGSG-----------DSSREFWFQTP 151 (466)
Q Consensus 118 ~~h~v~l~gL~P~T~Y~Yrv~~~-----------~~s~~~~F~T~ 151 (466)
.....+|+||+|+|.|.++|..- ..|+...|+|+
T Consensus 80 ~~~~~~l~~L~p~T~Y~~~V~A~n~~G~~~~~~g~~S~~v~~~T~ 124 (125)
T d2dtge3 80 NHPGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTD 124 (125)
T ss_dssp SCCEEEECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCC
T ss_pred ccCEEEECCCccCCEEEEEEEEEeCCCccCCCCCCCcccEEEEcC
Confidence 44467899999999999999642 24556666664
|
| >d2z06a1 d.159.1.10 (A:1-252) Hypothetical protein TTHA0625 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TTHA0625-like domain: Hypothetical protein TTHA0625 species: Thermus thermophilus [TaxId: 274]
Probab=93.92 E-value=1.1 Score=39.75 Aligned_cols=190 Identities=16% Similarity=0.169 Sum_probs=102.7
Q ss_pred eEEEEEccCCCCCCcHHH----HHHHHHhCCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCcee
Q 012311 160 YKFGIIGDLGQTYNSLST----LEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEI 235 (466)
Q Consensus 160 ~~f~v~GD~g~~~~~~~t----l~~~~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~ 235 (466)
+|++++||.=... .... |.++ +++.|||+.-|.++-. |.... . ..+.++++ ..+- ..+.|||=+
T Consensus 1 MkiLfiGDIvG~~-Gr~~v~~~Lp~L-k~~~DfVIaNgENaa~-G~Git--~---k~~~~L~~---~GVD-vIT~GNH~w 68 (252)
T d2z06a1 1 MRVLFIGDVMAEP-GLRAVGLHLPDI-RDRYDLVIANGENAAR-GKGLD--R---RSYRLLRE---AGVD-LVSLGNHAW 68 (252)
T ss_dssp CEEEEECCBCHHH-HHHHHHHHHHHH-GGGCSEEEEECTTTTT-TSSCC--H---HHHHHHHH---HTCC-EEECCTTTT
T ss_pred CeEEEEeccCCHH-HHHHHHHHhHHH-HhhCCEEEEeeeccCC-CcCCC--H---HHHHHHHH---hCCC-EEEcCcccc
Confidence 4799999973222 1222 2333 3478999999999864 32211 1 22222222 2343 368999987
Q ss_pred eccCcCCcccccccccccccCCCCC-CCCCCCceEEEeeCCEEEEEEcCCCC--CCCChHHHHHHHHHHhhccCCCCCeE
Q 012311 236 EYMTYMGEVVPFKSYLHRYPTPHLA-SKSSSPLWYAIRRASAHIIVLSSYSP--FVKYTPQWEWLREELKKVDREKTPWL 312 (466)
Q Consensus 236 ~~~~~~~~~~~f~~y~~rf~~P~~~-~~~~~~~yYsf~~g~v~fI~Lds~~~--~~~~~~Q~~WL~~~L~~~~r~~~~w~ 312 (466)
+.. +-..|-. ..+.-.|.|- .+..+.-|+.|+.++-.+.+++-... ......=.+=+++-|++ .+++.+
T Consensus 69 dkk----ei~~~i~-~~~llRP~N~p~~~PG~G~~i~~~~g~ki~ViNl~Gr~fm~~~d~PF~~~d~~~~~---~~~~~i 140 (252)
T d2z06a1 69 DHK----EVYALLE-SEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRLLEE---EKADYV 140 (252)
T ss_dssp SCT----THHHHHH-HSSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHHHHHH---CCCSEE
T ss_pred cch----hhhhhhc-cccccchhhccCCCCCCcEEEEccCCceEEEEEecccccCCCCCCHHHHHHHHHhh---cCccEE
Confidence 642 1111111 1122234442 23345668889988877777775321 11111111223333444 456778
Q ss_pred EEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccceecCCcccccCCCCCcEEEE-eCCCCCCC
Q 012311 313 IVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYNISSGDCFPVPDKSAPVYIT-VGDGGNQE 384 (466)
Q Consensus 313 IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~~~~~~~~~~~~~g~vyiv-~G~gG~~~ 384 (466)
||=+|. |......+| -++.+=+|..++.-|+|=-+.+.. .-++|+.|++ +|.-|...
T Consensus 141 ~VDfHa-----------EaTSEK~A~-g~~ldGrvsavvGTHTHV~TaD~r---ILp~GTayiTDvGM~G~~~ 198 (252)
T d2z06a1 141 LVEVHA-----------EATSEKMAL-AHYLDGRASAVLGTHTHVPTLDAT---RLPKGTLYQTDVGMTGTYH 198 (252)
T ss_dssp EEEEEC-----------SCHHHHHHH-HHHHBTTBSEEEEESSCSCBSCCE---ECTTSCEEESCCCCBEESS
T ss_pred EEEccc-----------chhhhheee-eEecCCCEEEEEecCccccccccE---EecCCeEEEccCccccchh
Confidence 888884 222333344 355667999999999874333322 2468999987 56666543
|
| >d1fyhb1 b.1.2.1 (B:12-109) Interferon-gamma receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interferon-gamma receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.78 E-value=0.12 Score=38.64 Aligned_cols=72 Identities=13% Similarity=0.066 Sum_probs=41.4
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCCCCcE--EEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEEE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEPGPST--VSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYYY 135 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~~~~~--V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~Y 135 (466)
+|+.|.+...+ ..++++|.-+...+... +++-......+....... ..........+.+|.|++.|++
T Consensus 3 ~P~nv~v~s~n---~~~~L~W~pP~~~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l~~~~~Y~f 72 (98)
T d1fyhb1 3 TPTNVTIESYN---MNPIVYWEYQIMPQVPVFTVEVKNYGVKNSEWIDACI-------NISHHYCNISDHVGDPSNSLWV 72 (98)
T ss_dssp CCEEEEEECBS---SCCEEEEECCCCSSCCEEEEEEEETTCSSSCCEEEEE-------EESSSEEECGGGCCSTTSCEEE
T ss_pred cCCceEEEEeC---CcEEEEECCCCCCCCCceeEEEEEeccccceeEEeee-------ecccceeeeEecccCCCCEEEE
Confidence 38888876543 35689999875444332 333333322221111110 0123344567889999999999
Q ss_pred Eecc
Q 012311 136 KIGS 139 (466)
Q Consensus 136 rv~~ 139 (466)
||.+
T Consensus 73 RV~A 76 (98)
T d1fyhb1 73 RVKA 76 (98)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9976
|
| >d1t71a_ d.159.1.9 (A:) Hypothetical protein MPN349 {Mycoplasma pneumoniae [TaxId: 2104]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Hypothetical protein MPN349 species: Mycoplasma pneumoniae [TaxId: 2104]
Probab=93.39 E-value=0.88 Score=41.02 Aligned_cols=192 Identities=18% Similarity=0.081 Sum_probs=104.0
Q ss_pred CCeEEEEEccCCCCCC---cHHHHHHHHHh-CCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCc
Q 012311 158 ASYKFGIIGDLGQTYN---SLSTLEHYMES-GAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNH 233 (466)
Q Consensus 158 ~~~~f~v~GD~g~~~~---~~~tl~~~~~~-~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNH 233 (466)
...|++++||.=.... -...|..+.+. ++|||+.-|-++.....-. ...+.++++ ..+- ..+.|||
T Consensus 3 ~~MkILfiGDIvG~~GR~~v~~~Lp~Lr~~~~iDfVIaNgENaa~G~Git------~k~~~eL~~---~GvD-vIT~GNH 72 (281)
T d1t71a_ 3 NSIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGKGLS------LKHYEFLKE---AGVN-YITMGNH 72 (281)
T ss_dssp CCCEEEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTTTSSCC------HHHHHHHHH---HTCC-EEECCTT
T ss_pred ccceEEEEEccCCHHHHHHHHHHhHHHHHHhCCCEEEECCccCCCCcCCC------HHHHHHHHH---hCCc-EEEcCch
Confidence 3679999999732211 01224455555 9999999999986432211 122222222 2343 3689999
Q ss_pred eeeccCcCCcccccccccccccCCCCC-----CCCCCCceEEEeeCCEEEEEEcCCCC-C-C--CChHHHHHHHHHHhhc
Q 012311 234 EIEYMTYMGEVVPFKSYLHRYPTPHLA-----SKSSSPLWYAIRRASAHIIVLSSYSP-F-V--KYTPQWEWLREELKKV 304 (466)
Q Consensus 234 E~~~~~~~~~~~~f~~y~~rf~~P~~~-----~~~~~~~yYsf~~g~v~fI~Lds~~~-~-~--~~~~Q~~WL~~~L~~~ 304 (466)
=++... ...|-.-..|.-.|.|- .+..+.-|..|+.++..+.+++-... + . .-.....=+++.+.+
T Consensus 73 ~wd~ke----i~~~i~~~~~llRP~N~p~~~p~~~pG~G~~i~~~~~~~i~Vinl~G~~fm~~~~~~~pf~~~~~~~~~- 147 (281)
T d1t71a_ 73 TWFQKL----DLAVVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNPFKVLKELILK- 147 (281)
T ss_dssp TTCCGG----GHHHHTTCTTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCCHHHHHHHHHTT-
T ss_pred hhhchh----hHHHHhhcccccccccccccccCCCCCceEEEEEccccceeeeeeccccccccccccHHHHHHHHhhcc-
Confidence 875321 11110011222233331 12334568888888777777775321 1 1 111223334444444
Q ss_pred cCCCCCeEEEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccceecCCcccccCCCCCcEEEE-eCCCC
Q 012311 305 DREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYNISSGDCFPVPDKSAPVYIT-VGDGG 381 (466)
Q Consensus 305 ~r~~~~w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~~~~~~~~~~~~~g~vyiv-~G~gG 381 (466)
.+++.+||=+|.= ......+| -++.+=+|..++.-|+|=-+.+.. .-++|+-|++ +|.-|
T Consensus 148 --~~~d~i~VDfHaE-----------ATSEK~A~-g~~lDGrvsaVvGTHTHV~TaD~r---ILp~GTAyiTDvGMtG 208 (281)
T d1t71a_ 148 --RDCDLHIVDFHAE-----------TTSEKNAF-CMAFDGYVTTIFGTHTHVPSADLR---ITPKGSAYITDVGMCG 208 (281)
T ss_dssp --CCCSEEEEEEECS-----------CHHHHHHH-HHHHTTTSSEEEEESSSSCCTTCE---ECTTSCEEESCCCEEB
T ss_pred --cCCCeEEEEeccc-----------hhhhhhhh-eeeeCCcEEEEEecCcccccCccc---cccCCeEEEecCcccc
Confidence 5677889988842 22233344 356667999999989873333222 2367899987 34444
|
| >d3d85d3 b.1.2.1 (D:212-305) The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.63 E-value=0.076 Score=39.98 Aligned_cols=67 Identities=10% Similarity=0.094 Sum_probs=37.4
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC--------CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG--------PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLE 128 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~--------~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~ 128 (466)
.+|+.|.+....+ ++.+.|+|..+.... .-.|+|....+.......-. .. ++..|.
T Consensus 3 dPP~nl~v~~~~~-~~~l~v~W~~P~~~~~~~~~~~L~Yev~y~~~~~~~~~~~~~~----------~~-----t~~~L~ 66 (94)
T d3d85d3 3 DPPKNLQLKPLKN-SRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKREKKDRVFT----------DK-----TSATVI 66 (94)
T ss_dssp CCCEEEEEEEC-----CEEEEEECCTTSCSCTTTSCEEEEEEEECC------CEEEE----------SS-----SEEEEC
T ss_pred CCCcccEEEEecC-CCeEEEEecCCCCcCCCCCeEEEEEEEEEEECCCCccEEeccc----------cc-----eEEEec
Confidence 4699999876543 467999999885321 12677766554333222111 11 123588
Q ss_pred CCCEEEEEecc
Q 012311 129 YDTKYYYKIGS 139 (466)
Q Consensus 129 P~T~Y~Yrv~~ 139 (466)
|++.|.+||..
T Consensus 67 p~~~Y~v~VRa 77 (94)
T d3d85d3 67 CRKNASISVRA 77 (94)
T ss_dssp CCSSCEEEEEE
T ss_pred CCCCEEEEEEE
Confidence 99999999975
|
| >d2cspa1 b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Rim binding protein 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.05 E-value=0.033 Score=43.86 Aligned_cols=73 Identities=19% Similarity=0.246 Sum_probs=44.7
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCC------CCCcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCC
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHE------PGPSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYD 130 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~------~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~ 130 (466)
.+|..|.+..+. ..+++.|+|.-+.. .+...+.|....+.... . ... ....-...++|+||+|+
T Consensus 12 ~pP~~v~v~~~~-s~~si~vsW~PP~~~~~~~~~~~~i~~Y~v~~~~~~~-~--~~~------~~~~~~~~~~i~~L~~~ 81 (117)
T d2cspa1 12 APPQDVTVQAGV-TPATIRVSWRPPVLTPTGLSNGANVTGYGVYAKGQRV-A--EVI------FPTADSTAVELVRLRSL 81 (117)
T ss_dssp CCCEEEEECCCS-STTEEEEEEECCCCCTTSCSSSSCEEEEEEESSSSEE-E--EEC------CTTCSEEEEESHHHHHH
T ss_pred CCCCccEEEEec-CCCEEEEEEcCCCccccCcccccceEEEEEEeecccc-e--eee------eeccceeeeeccCCCCC
Confidence 468888876543 24689999986421 12346778754332211 1 010 12233456789999999
Q ss_pred CEEEEEecc
Q 012311 131 TKYYYKIGS 139 (466)
Q Consensus 131 T~Y~Yrv~~ 139 (466)
|.|.+||..
T Consensus 82 t~Y~v~V~A 90 (117)
T d2cspa1 82 EAKGVTVRT 90 (117)
T ss_dssp TCSCBEEEE
T ss_pred cEEEEEEEE
Confidence 999999964
|
| >d1bqua1 b.1.2.1 (A:5-99) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.00 E-value=0.15 Score=38.04 Aligned_cols=72 Identities=13% Similarity=0.085 Sum_probs=43.8
Q ss_pred CCCceEEEeeecCCCCcEEEEEEcCCCCC---CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEE
Q 012311 57 NSPQQVHITQGDYDGKAVIISWVTPHEPG---PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKY 133 (466)
Q Consensus 57 ~~P~qv~lt~~~~~~~~~~V~W~t~~~~~---~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y 133 (466)
.+|..|.+.... .++++++|.-+...+ .-.|+|....+...... .. ...--....+.+|+|++.|
T Consensus 5 ~~P~n~~~~~~~--~~si~~~W~p~~~~~~~~~y~v~~~~~~~~~~~~~------~~----~~~~~~~~~~~~L~~~~~Y 72 (95)
T d1bqua1 5 EKPKNLSCIVNE--GKKMRCEWDGGRETHLETNFTLKSEWATHKFADCK------AK----RDTPTSCTVDYSTVYFVNI 72 (95)
T ss_dssp CCCEEEEEEEET--TSCCEEEEECCSCCSSCCEEEEEEEETTEECCCEE------CC----SSCTTEEECSSCCCTTSCE
T ss_pred CCCeeeEEEEcc--CCEEEEEEeCcccCCCceEEEEEEEEcccceeEee------cc----cccceeeeeeeecCCCcEE
Confidence 468888887664 578999998765432 23566665443211111 00 1111122356799999999
Q ss_pred EEEeccC
Q 012311 134 YYKIGSG 140 (466)
Q Consensus 134 ~Yrv~~~ 140 (466)
++||...
T Consensus 73 ~f~V~A~ 79 (95)
T d1bqua1 73 EVWVEAE 79 (95)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999764
|
| >d1t70a_ d.159.1.9 (A:) Putative phosphatase DR1281 {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Putative phosphatase DR1281 species: Deinococcus radiodurans [TaxId: 1299]
Probab=89.74 E-value=3.6 Score=36.31 Aligned_cols=191 Identities=16% Similarity=0.139 Sum_probs=104.3
Q ss_pred eEEEEEccCCCCCCcHHH----HHHHHHhCCCEEEEcccccccccccccccchhHHHHHHHHHHHhhcCCeEEcCCCcee
Q 012311 160 YKFGIIGDLGQTYNSLST----LEHYMESGAQTVLFLGDLSYADRYQFIDVGVRWDSWGRFVERSAAYQPWIWSAGNHEI 235 (466)
Q Consensus 160 ~~f~v~GD~g~~~~~~~t----l~~~~~~~~dfvl~~GDl~Y~~~~~~~d~~~~wd~~~~~~~~l~~~~P~~~~~GNHE~ 235 (466)
.|++++||.=... .... |..+ +++.|||+.-|.++-. |.... .+.+.++++ ..+- ..+.|||=+
T Consensus 1 MkILfiGDIvG~~-Gr~~v~~~Lp~l-k~~~DfVIaNgENaa~-G~Git-----~~~~~~l~~---~GvD-viT~GNH~w 68 (255)
T d1t70a_ 1 MRVLFIGDVFGQP-GRRVLQNHLPTI-RPQFDFVIVNMENSAG-GFGMH-----RDAARGALE---AGAG-CLTLGNHAW 68 (255)
T ss_dssp CEEEEECCBBHHH-HHHHHHHHHHHH-GGGCSEEEEECTBTTT-TSSCC-----HHHHHHHHH---HTCS-EEECCTTTT
T ss_pred CeEEEEecCCCHH-HHHHHHHHhHHH-HhhCCEEEECCccCCC-CcCCC-----HHHHHHHHH---cCCc-EEEcCchhh
Confidence 4789999973222 1222 3333 3478999999999864 33211 133333332 2343 368999987
Q ss_pred eccCcCCcccccc-cccccccCCCCC--CCCCCCceEEEeeCCEEEEEEcCCCC--CCCChHHHHHHHHHHhhccCCCCC
Q 012311 236 EYMTYMGEVVPFK-SYLHRYPTPHLA--SKSSSPLWYAIRRASAHIIVLSSYSP--FVKYTPQWEWLREELKKVDREKTP 310 (466)
Q Consensus 236 ~~~~~~~~~~~f~-~y~~rf~~P~~~--~~~~~~~yYsf~~g~v~fI~Lds~~~--~~~~~~Q~~WL~~~L~~~~r~~~~ 310 (466)
+.. +-..|- ....+.--|.|- ++..+.-|+.|+..+..+.+++-... ......=.+=+++.|++ .+.+
T Consensus 69 dkk----ei~~~i~~~~~~ilRP~N~p~~~~PG~G~~i~~~~g~ki~ViNl~Gr~fM~~~d~PF~~~d~~l~~---~~~~ 141 (255)
T d1t70a_ 69 HHK----DIYPMLSEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMDALLER---DDLG 141 (255)
T ss_dssp SST----THHHHHHTTCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHHHHTTC---SSCC
T ss_pred cch----hHHHHHhhcchhhhhhhccCCCCCCCceEEEEeeccCcEEEEEeccccccCcccCHHHHHHHHHhh---cCCC
Confidence 632 111110 011223344442 23446678888888877777775321 11111122335555655 4566
Q ss_pred eEEEEeccccccCCCcccccCHHHHHHHHHHHHHcCCcEEEecccceecCCcccccCCCCCcEEEE-eCCCCCCC
Q 012311 311 WLIVLMHVPIYNSNEAHFMEGESMRAAFESWFVRYKVDYRISNLHYNISSGDCFPVPDKSAPVYIT-VGDGGNQE 384 (466)
Q Consensus 311 w~IV~~H~P~y~s~~~h~~~~~~~r~~l~~ll~~y~Vd~~~~gh~~~~~~~~~~~~~~~~g~vyiv-~G~gG~~~ 384 (466)
.+||=+|. |......+|- ++.+=+|..++.-|+|=-+.+.. .-++|+.|++ +|.-|...
T Consensus 142 ~i~VDfHa-----------EaTSEK~A~g-~~ldGrvsav~GTHTHV~TaD~r---Ilp~GTay~TDvGMtG~~~ 201 (255)
T d1t70a_ 142 TVFVDFHA-----------EATSEKEAMG-WHLAGRVAAVIGTHTHVPTADTR---ILKGGTAYQTDAGFTGPHD 201 (255)
T ss_dssp EEEEEEEC-----------SCHHHHHHHH-HHHTTSSSEEEEESSCSCBSCCE---EETTTEEEESCCCCBEESS
T ss_pred eEEEEccc-----------hhHHHHHHHH-hhhcCcEEEEEecCcccccccce---EecCCcEEEecCccccchh
Confidence 78888884 2223333443 55667999999999874333322 2367899987 45555543
|
| >d1y6kr1 b.1.2.1 (R:2-100) Interleukin-10 receptor 1, IL-10R1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-10 receptor 1, IL-10R1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.38 E-value=0.18 Score=38.11 Aligned_cols=72 Identities=13% Similarity=0.038 Sum_probs=46.2
Q ss_pred CCceEEEeeecCCCCcEEEEEEcCCCCC---CcEEEEeecCCCCceEEEeEEEEeeeeccccceEEEEEecCCCCCCEEE
Q 012311 58 SPQQVHITQGDYDGKAVIISWVTPHEPG---PSTVSYGTSADKFDFTAEGTVNNYTFYKYKSGYIHQCLVDGLEYDTKYY 134 (466)
Q Consensus 58 ~P~qv~lt~~~~~~~~~~V~W~t~~~~~---~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~~~~h~v~l~gL~P~T~Y~ 134 (466)
+|+.|+|...+ ...+++|.-+...+ .-.|+|.......+..+...... ...-....+.+|.++..|+
T Consensus 6 ~P~nv~~~s~n---~~~~L~W~pp~~~g~~~~Y~Ve~~~~~~~~W~~v~~c~~~-------t~~~~~~~~~~l~~~~~Y~ 75 (99)
T d1y6kr1 6 SPPSVWFEAEF---FHHILHWTPIPQQSESTCYEVALLRYGIESWNSISQCSQT-------LSYDLTAVTLDLYHSNGYR 75 (99)
T ss_dssp CCSCEEEEEET---TEEEEEECCCTTCCTTCEEEEEEEETTSCCCEEEEEEESS-------SEEECGGGGTTGGGSSCEE
T ss_pred CCCcceEEEEC---CEEEEEEcCCCCcCCCCEEEEEEEECCCcceEEEEeeccc-------cccceeeeeeecCCCCEEE
Confidence 38889887664 47999997554333 24788887666566665432211 0001112467999999999
Q ss_pred EEecc
Q 012311 135 YKIGS 139 (466)
Q Consensus 135 Yrv~~ 139 (466)
+||..
T Consensus 76 fRVrA 80 (99)
T d1y6kr1 76 ARVRA 80 (99)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99976
|
| >d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.60 E-value=0.16 Score=41.64 Aligned_cols=33 Identities=18% Similarity=0.190 Sum_probs=25.8
Q ss_pred EEEEecCCCCCCEEEEEeccC---------CccceEEEECCC
Q 012311 120 HQCLVDGLEYDTKYYYKIGSG---------DSSREFWFQTPP 152 (466)
Q Consensus 120 h~v~l~gL~P~T~Y~Yrv~~~---------~~s~~~~F~T~p 152 (466)
...+|+||+|+|.|.+||..- ..+....|||+|
T Consensus 155 ~~~~i~~L~p~t~Y~~~V~A~n~~~~~~~~s~s~~~~~rT~P 196 (196)
T d2dtge2 155 ESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMP 196 (196)
T ss_dssp SEEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEEEECCC
T ss_pred EEEEECCCCCCCEEEEEEEEEECCCCCCCccCcceEEeeCCC
Confidence 357899999999999999641 135667889987
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.50 E-value=1.4 Score=40.73 Aligned_cols=21 Identities=14% Similarity=0.281 Sum_probs=18.6
Q ss_pred HHHHHHHHHHcCCcEEEeccc
Q 012311 335 RAAFESWFVRYKVDYRISNLH 355 (466)
Q Consensus 335 r~~l~~ll~~y~Vd~~~~gh~ 355 (466)
.++++..|+++|+++.+.+|.
T Consensus 233 ~~~~~~Fl~~n~l~lIIR~He 253 (324)
T d1s95a_ 233 PDVTKAFLEENNLDYIIRSHE 253 (324)
T ss_dssp HHHHHHHHHHHTCCEEEECCS
T ss_pred HHHHHHHHHHcCCcEEEEcCc
Confidence 368889999999999999995
|
| >d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-1 (PP-1) species: Human (Homo sapiens), beta isoform [TaxId: 9606]
Probab=82.92 E-value=0.81 Score=41.79 Aligned_cols=21 Identities=5% Similarity=0.099 Sum_probs=18.6
Q ss_pred HHHHHHHHHHcCCcEEEeccc
Q 012311 335 RAAFESWFVRYKVDYRISNLH 355 (466)
Q Consensus 335 r~~l~~ll~~y~Vd~~~~gh~ 355 (466)
.++++..|+++++++.+.+|.
T Consensus 224 ~~~~~~Fl~~n~l~~IIR~He 244 (294)
T d1jk7a_ 224 AEVVAKFLHKHDLDLICRAHQ 244 (294)
T ss_dssp HHHHHHHHHHTTCSEEEECCS
T ss_pred HHHHHHHHHHCCCCEEEEcCc
Confidence 467889999999999999995
|
| >d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.56 E-value=0.87 Score=41.46 Aligned_cols=21 Identities=5% Similarity=-0.078 Sum_probs=18.1
Q ss_pred HHHHHHHHHHcCCcEEEeccc
Q 012311 335 RAAFESWFVRYKVDYRISNLH 355 (466)
Q Consensus 335 r~~l~~ll~~y~Vd~~~~gh~ 355 (466)
.++.+..++++|+++.+.+|.
T Consensus 217 ~~~~~~Fl~~n~l~~IIR~He 237 (288)
T d3c5wc1 217 QDISETFNHANGLTLVSRAHQ 237 (288)
T ss_dssp HHHHHHHHHHTTCSEEEECCS
T ss_pred HHHHHHHHHHCCCcEEEcCCC
Confidence 457788999999999999985
|