Citrus Sinensis ID: 012349

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-----

MVQTNEVVNDSLSSNGLIHHTNGSLEERLDELRRLMGKAEGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQELAKGRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILIMRESPIQAILEALRDETMNDPRDRIEIAQTHVFYRPSLLGQLP

cccccccEEcccccccccccccccHHHHHHHHHHHcccccccccEEEEEcccHHHHHHHHHHHHcccccccccEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHcccccccccccccccCEEEccHHHHHccccEEEEEcccHHHHHHHHHHHHHHcccccccEEEEEEEccccccccccccccHHHHHHHHcccccccEEEEcccccHHHHHcccccEEEEEcccccHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHcccccccHHHHHHHcccccHHHHHHHHcccccEEcHHHHHHHHHHHHHcccCEccccccccccccccccHHHHHHHHHHccccHHHHHHHHHccccccccHHHHHHHHcccccccccccccc

***************************************EGDPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQELAKGRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILIMRESPIQAILEALRD********RIEIAQTHVFYRPSLLG***

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MVQTNEVVNDSLSSNGLIHHTxxxxxxxxxxxxxxxxxxxxxPLRIVGVGAGAWGSVFTAMLQDSYGYLRDKVLIRIWRRPGRSVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLHADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTETKEVFEEISRYWKERITVPVIISLAKGVEAELEAVPRIITPTQMINRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRRPHFTVWDNGDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMVFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQELAKGRLTLDLGDSIKGKGMIQGISAVKAFYELLSQSSLSVLHPEENKPVATVELCPILKMLYKILIMRESPIQAILEALRDETMNDPRDRIEIAQTHVFYRPSLLGQLP

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Glycerol-3-phosphate dehydrogenase [NAD(+)] GPDHC1, cytosolic	Involved in cell redox homeostasis. Required for maintaining a steady state cellular NADH/NAD(+) ratio through a mitochondrial glycerol-3-phosphate redox shuttle. May function with the mitochondrial FAD-dependent glycerol-3-phosphate dehydrogenase SDP6 to shuttle reducing equivalents into the mitochondria for respiration.	confident	O22216
Probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic	May be involved in cell redox homeostasis.	confident	Q8S0G4
Probable glycerol-3-phosphate dehydrogenase [NAD(+)] 3, cytosolic	May be involved in cell redox homeostasis.	probable	Q65X70

Prediction of Enzyme Commission Number

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1YJ8, chain A
Confidence level:very confident
Coverage over the Query: 32-127,146-395,408-440
View the alignment between query and template
View the model in PyMOL

Template: 3VTF, chain A
Confidence level:confident
Coverage over the Query: 23-26,39-118,130-290,308-331
View the alignment between query and template
View the model in PyMOL