Citrus Sinensis ID: 012361

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-----
Protein Sequence
MYLIFSSLCMQSVGFTGASAFILAVIWFISFGLVLVAHHCCGWRINIKGKESASSQRICLILLIVFTCAAAIGCILLSVGQDEFHGEAMHTLKYVVNQSDYTVKTLRNVTEYLSLAKTINVAQVFLPSAVMDDIDKLNRDLSTAANTLADKTSENSAKIRKVFNAVRSALITVAALMLLLSIIGLFLSILRHKHAIHIFILSGWLLVAITFILCGVFVILNNAISDTCMAMDEWVDHPHAETALSNILPCVDQRTTNKSLIQSKEVITDIVNVVNQFVYNIANANPSQDYIYYYNQTGPVMPPLCYPYDSQLQDRQCGSYEVSIANASKVWQNYTCELSTSGSSAFGRCNSVGRVTPYFYKELVSAVTEIYALQLYTPRLLSLQDCNFVRDTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWILYANRPQREEVFVNLPLPIKCISRSQKNSVNSSNA
Secondary Structure (PSIPRED)
ccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHEEEEccHHHHcHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccHHHHHHccEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccEcccccHHHHcccEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcHHHHHHcccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccc
Coil and Loop (DISEMBL)
MYLIFSSLCMQSVGFTGASAFILAVIWFISFGLVLVAHHCcgwrinikgkesasSQRICLILLIVFTCAAAIGCILLsvgqdefhgEAMHTLKYVVNQSDYTVKTLRNVTEYLSLAKTINVAQVflpsavmddIDKLNRDLSTAANTladktsensAKIRKVFNAVRSALITVAALMLLLSIIGLFLSILRHKHAIHIFILSGWLLVAITFILCGVFVILNNAISDTCMamdewvdhphaetalsnilpcvdqrttnksliQSKEVITDIVNVVNQFVYNiananpsqdyiyyynqtgpvmpplcypydsqlqdrqcgsYEVSIANASKVWQNYTCelstsgssafgrcnsvgrvTPYFYKELVSAVTEIYALQLytprllslqdcnfVRDTFqnitsnycpplEHYLKIVNAGLGMISFGVLLCLLLWILYanrpqreevfvnlplpikcisrsqknsvnssna
Flexible Loop (DISEMBL)
MYLIFSSLCMQSVGFTGASAFILAVIWFISFGLVLVAHHCCGWRINIKGKESASSQRICLILLIVFTCAAAIGCILLSVGQDEFHGEAMHTLKYVVNQSDYTVKTLRNVTEYLSLAKTINVAQVFLPSAVMDDIDKLNRDLSTAAntladktsensakIRKVFNAVRSALITVAALMLLLSIIGLFLSILRHKHAIHIFILSGWLLVAITFILCGVFVILNNAISDTCMAMDEWVDHPHAETALSNILPCVDQRTTNKSLIQSKEVITDIVNVVNQFVYNIANANPSQDYIYYYNQTGPVMPPLCYPYDSQLQDRQCGSYEVSIANASKVWQNYTCELstsgssafgrcNSVGRVTPYFYKELVSAVTEIYALQLYTPRLLSLQDCNFVRDTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWILYANRPQREEVFVNLPLPikcisrsqknsvnssna
Low Complexity Region (SEG)
MYLIFSSLCMQSVGFTGASAFILAVIWFISFGLVLVAHHCCGWRINIKGKESASSQRICLILLIVFTCAAAIGCILLSVGQDEFHGEAMHTLKYVVNQSDYTVKTLRNVTEYLSLAKTINVAQVFLPSAVMDDIDKLNRDLSTAANTLADKTSENSAKIRKVFNAVRSALITVAAlmlllsiiglflsilRHKHAIHIFILSGWLLVAITFILCGVFVILNNAISDTCMAMDEWVDHPHAETALSNILPCVDQRTTNKSLIQSKEVITDIVNVVNQFVYNIANANPSQDYIYYYNQTGPVMPPLCYPYDSQLQDRQCGSYEVSIANASKVWQNYTCELSTSGSSAFGRCNSVGRVTPYFYKELVSAVTEIYALQLYTPRLLSLQDCNFVRDTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWILYANRPQREEVFVNLPLPIKCISRSQKNSVNSSNA
Disordered region (IsUnstruct)
*YLIFSSLCMQSVGFTGASAFILAVIWFISFGLVLVAHHCCGWRINIKGKESASSQRICLILLIVFTCAAAIGCILLSVGQDEFHGEAMHTLKYVVNQSDYTVKTLRNVTEYLSLAKTINVAQVFLPSAVMDDIDKLNRD*****************KIRKVFNAVRSALITVAALMLLLSIIGLFLSILRHKHAIHIFILSGWLLVAITFILCGVFVILNNAISDTCMAMDEWVDHPHAETALSNILPCVDQRTTNKSLIQSKEVITDIVNVVNQFVYNIANANPSQDYIYYYNQTGPVMPPLCYPYDSQLQDRQCGSYEVSIANASKVWQNYTCELSTSGSSAFGRCNSVGRVTPYFYKELVSAVTEIYALQLYTPRLLSLQDCNFVRDTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWILYANRPQREEVFVNLPLPIKCI*************
Disordered Region (DISOPRED)
MYLIFSSLCMQSVGFTGASAFILAVIWFISFGLVLVAHHCCGWRINI****SASSQRICLILLIVFTCAAAIGCILLSVGQDEFHGEAMHTLKYVVNQSDYTVKTLRNVTEYLSLAKTINVAQVFLPSAVMDDIDKLNRDLSTAANTLADKTSENSAKIRKVFNAVRSALITVAALMLLLSIIGLFLSILRHKHAIHIFILSGWLLVAITFILCGVFVILNNAISDTCMAMDEWVDHPHAETALSNILPCVDQRTTNKSLIQSKEVITDIVNVVNQFVYNIANANPSQDYIYYYNQTGPVMPPLCYPYDSQLQDRQCGSYEVSIANASKVWQNYTCELSTSGSSAFGRCNSVGRVTPYFYKELVSAVTEIYALQLYTPRLLSLQDCNFVRDTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWILYANRP*****************************
Disordered Region (DISEMBL)
MYLIFSSLCMQSVGFTGASAFILAVIWFISFGLVLVAHHCCGWRINIKGKESASSQRICLILLIVFTCAAAIGCILLSVGQDEFHGEAMHTLKYVVNQSDYTVKTLRNVTEYLSLAKTINVAQVFLPSAVMDDIDKLNRDLSTAANTLADKTSENSAKIRKVFNAVRSALITVAALMLLLSIIGLFLSILRHKHAIHIFILSGWLLVAITFILCGVFVILNNAISDTCMAMDEWVDHPHAETALSNILPCVDQRTTNKSLIQSKEVITDIVNVVNQFVYNIANANPSQDYIYYYNQTGPVMPPLCYPYDSQLQDRQCGSYEVSIANASKVWQNYTCELSTSGSSAFGRCNSVGRVTPYFYKELVSAVTEIYALQLYTPRLLSLQDCNFVRDTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWILYANRPQREEVFVNLPLPIKCISR***********
Disordered Region (DISPRO)
MYLIFSSLCMQSVGFTGASAFILAVIWFISFGLVLVAHHCCGWRINIKGKESASSQRICLILLIVFTCAAAIGCILLSVGQDEFHGEAMHTLKYVVNQSDYTVKTLRNVTEYLSLAKTINVAQVFLPSAVMDDIDKLNRDLSTAANTLADKTSENSAKIRKVFNAVRSALITVAALMLLLSIIGLFLSILRHKHAIHIFILSGWLLVAITFILCGVFVILNNAISDTCMAMDEWVDHPHAETALSNILPCVDQRTTNKSLIQSKEVITDIVNVVNQFVYNIANANPSQDYIYYYNQTGPVMPPLCYPYDSQLQDRQCGSYEVSIANASKVWQNYTCELSTSGSSAFGRCNSVGRVTPYFYKELVSAVTEIYALQLYTPRLLSLQDCNFVRDTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWILYANRPQREEVFVN*********************
Transmembrane Helix (TMHMM)
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MYLIFSSLCMQSVGFTGASAFILAVIWFISFGLVLVAHHCCGWRINIKGKESASSQRICLILLIVFTCAAAIGCILLSVGQDEFHGEAMHTLKYVVNQSDYTVKTLRNVTEYLSLAKTINVAQVFLPSAVMDDxxxxxxxxxxxxxxxxxxxxxNSAKIRKVFNAVRSALITVAALMLLLSIIGLFLSILRHKHAIHIFILSGWLLVAITFILCGVFVILNNAISDTCMAMDEWVDHPHAETALSNILPCVDQRTTNKSLIQSKEVITDIVNVVNQFVYNIANANPSQDYIYYYNQTGPVMPPLCYPYDSQLQDRQCGSYEVSIANASKVWQNYTCELSTSGSSAFGRCNSVGRVTPYFYKELVSAVTEIYALQLYTPRLLSLQDCNFVRDTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWILYANRPQREEVFVNLPLPIKCISRSQKNSVNSSNA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	465
224108357	564	predicted protein [Populus trichocarpa]	0.965	0.796	0.718	0.0
356524559	559	PREDICTED: uncharacterized protein LOC10	0.963	0.801	0.657	1e-176
145337400	557	uncharacterized protein [Arabidopsis tha	0.926	0.773	0.675	1e-174
110740574	557	hypothetical protein [Arabidopsis thalia	0.926	0.773	0.673	1e-173
297838929	557	hypothetical protein ARALYDRAFT_476243 [	0.939	0.784	0.661	1e-173
359472887	536	PREDICTED: uncharacterized protein LOC10	0.933	0.809	0.710	1e-172
297737727	701	unnamed protein product [Vitis vinifera]	0.933	0.619	0.710	1e-172
356536222	550	PREDICTED: uncharacterized protein LOC10	0.929	0.785	0.695	1e-170
356575630	543	PREDICTED: uncharacterized protein LOC10	0.929	0.795	0.695	1e-170
356566456	530	PREDICTED: uncharacterized protein LOC10	0.907	0.796	0.683	1e-168

>gi|224108357|ref|XP_002314819.1| predicted protein [Populus trichocarpa] gi|222863859|gb|EEF00990.1| predicted protein [Populus trichocarpa]

 Score =  662 bits (1708), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/454 (71%), Positives = 381/454 (83%), Gaps = 5/454 (1%)

Query: 12  SVGFTGASAFILAVIWFISFGLVLVAHHCCGWRINIKGKESASSQRICLILLIVFTCAAA 71
           SVGFTGA+ FILA +WF  FG  LVAHHC  WRINIK K S+ SQRI LI+LI+FTCAAA
Sbjct: 103 SVGFTGAAGFILAFLWFFLFGFALVAHHCFKWRINIKDKGSSRSQRISLIMLILFTCAAA 162

Query: 72  IGCILLSVGQDEFHGEAMHTLKYVVNQSDYTVKTLRNVTEYLSLAKTINVAQVFLPSAVM 131
           IGCILL VGQD+FHGEAM+TLKYVVNQSDYTV+TL+NVTEYLSLAKTIN+AQ+ LPS VM
Sbjct: 163 IGCILLCVGQDDFHGEAMNTLKYVVNQSDYTVQTLKNVTEYLSLAKTINIAQLVLPSNVM 222

Query: 132 DDIDKLNRDLSTAANTLADKTSENSAKIRKVFNAVRSALITVAALMLLLSIIGLFLSILR 191
           DDIDKLN DL+ AA+TL +KTSEN+ KI KVFNAVRSALITVAA+ML+L+++G  LSIL 
Sbjct: 223 DDIDKLNVDLNAAADTLTEKTSENAGKIVKVFNAVRSALITVAAVMLILALLGFLLSILG 282

Query: 192 HKHAIHIFILSGWLLVAITFILCGVFVILNNAISDTCMAMDEWVDHPHAETALSNILPCV 251
           H+HAIHIF++SGWLLVA+TFILCGVF++LNNAISDTC+AM+EWV++PHA +ALS+ILPCV
Sbjct: 283 HQHAIHIFVVSGWLLVAVTFILCGVFILLNNAISDTCLAMEEWVENPHAASALSSILPCV 342

Query: 252 DQRTTNKSLIQSKEVITDIVNVVNQFVYNIANANPSQDYIYYYNQTGPVMPPLCYPYDSQ 311
           DQRTTN +L+QSKEVITDIVNVVN ++Y  ANANPSQ    YYNQ+GP MPPLCYP+DS 
Sbjct: 343 DQRTTNNTLVQSKEVITDIVNVVNTYIYTFANANPSQTEFNYYNQSGPSMPPLCYPFDSL 402

Query: 312 LQDRQCGSYEVSIANASKVWQNYTCELSTSGSSAFGRCNSVGRVTPYFYKELVSAVTEIY 371
            QDRQC   EVS+ANAS VWQNYTC +S+S     G C +VGRV P  Y++LV+AV E Y
Sbjct: 403 YQDRQCEPREVSMANASVVWQNYTCMVSSS-----GLCTTVGRVIPDIYRQLVAAVNESY 457

Query: 372 ALQLYTPRLLSLQDCNFVRDTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWIL 431
           AL+ YTP LLSLQDC FVRDTF  ITS++CPPLEHYLKIVNAGLG+IS GVLLCL+LWIL
Sbjct: 458 ALEYYTPVLLSLQDCKFVRDTFLEITSSHCPPLEHYLKIVNAGLGLISVGVLLCLVLWIL 517

Query: 432 YANRPQREEVFVNLPLPIKCISRSQKNSVNSSNA 465
           YAN P  EEVF  +  PIKC S      + S+++
Sbjct: 518 YANCPLSEEVFAKISSPIKCSSGCTGVKIGSTSS 551

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356524559|ref|XP_003530896.1| PREDICTED: uncharacterized protein LOC100796983 [Glycine max]

 Score =  623 bits (1607), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 298/453 (65%), Positives = 364/453 (80%), Gaps = 5/453 (1%)

Query: 12  SVGFTGASAFILAVIWFISFGLVLVAHHCCGWRINIKGKESASSQRICLILLIVFTCAAA 71
           SVGFTG + F LAV+WFISFGL LV H CCGW INIK K S   QRI L+LL++FTC   
Sbjct: 104 SVGFTGVAGFTLAVLWFISFGLALVIHLCCGWGINIKDKGSNRLQRIWLVLLLLFTCVVT 163

Query: 72  IGCILLSVGQDEFHGEAMHTLKYVVNQSDYTVKTLRNVTEYLSLAKTINVAQVFLPSAVM 131
            GCI+LS GQD+FHGEA+ TL YVVNQSDYTV+TLRNVTEYL+L KTI VA++FLPS +M
Sbjct: 164 TGCIVLSFGQDKFHGEAVDTLHYVVNQSDYTVQTLRNVTEYLALTKTIVVAEMFLPSNIM 223

Query: 132 DDIDKLNRDLSTAANTLADKTSENSAKIRKVFNAVRSALITVAALMLLLSIIGLFLSILR 191
           DDIDKLN DL +AA+TL+ +T+ENS KIRKVFNA R ALI +AA+M+LL++IGL LSIL 
Sbjct: 224 DDIDKLNADLDSAADTLSKQTNENSFKIRKVFNAARLALIMMAAVMILLAVIGLILSILG 283

Query: 192 HKHAIHIFILSGWLLVAITFILCGVFVILNNAISDTCMAMDEWVDHPHAETALSNILPCV 251
           ++HAI IF+++GWLLVA TFI CGVF ILNNAI DTCMAM EWV++PHAE+ALS+ILPCV
Sbjct: 284 YQHAILIFVITGWLLVATTFIFCGVFTILNNAICDTCMAMGEWVENPHAESALSHILPCV 343

Query: 252 DQRTTNKSLIQSKEVITDIVNVVNQFVYNIANANPSQDYIYYYNQTGPVMPPLCYPYDSQ 311
           DQRTTNK+L QSK+V+T+IV++VN+F+Y+ A+A+PSQ  + YYNQ+GP MPPLCYP+DSQ
Sbjct: 344 DQRTTNKTLFQSKQVVTNIVSIVNRFIYDTADASPSQGSMNYYNQSGPAMPPLCYPFDSQ 403

Query: 312 LQDRQCGSYEVSIANASKVWQNYTCELSTSGSSAFGRCNSVGRVTPYFYKELVSAVTEIY 371
            ++ QC   EVS+ANAS VW+ Y C+     +S +G C +VGRVTP  Y ELV  V E Y
Sbjct: 404 FREHQCTPQEVSLANASLVWKRYECK-----TSEYGVCTTVGRVTPEIYLELVQVVNESY 458

Query: 372 ALQLYTPRLLSLQDCNFVRDTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWIL 431
           AL+ YTP LLSLQ+CNFVR  F+ ITS YC PL HYLK++N GLG+IS GVLLCL+LWIL
Sbjct: 459 ALEHYTPLLLSLQNCNFVRHAFKEITSRYCLPLNHYLKVINVGLGLISIGVLLCLVLWIL 518

Query: 432 YANRPQREEVFVNLPLPIKCISRSQKNSVNSSN 464
           YANRPQREE FV L +  K  ++  KN   +S+
Sbjct: 519 YANRPQREEAFVRLYIAKKLKNKFSKNPNRNSS 551

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145337400|ref|NP_177267.2| uncharacterized protein [Arabidopsis thaliana] gi|332197041|gb|AEE35162.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  617 bits (1590), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 296/438 (67%), Positives = 361/438 (82%), Gaps = 7/438 (1%)

Query: 12  SVGFTGASAFILAVIWFISFGLVLVAHHCCGWRINIKGKESA-SSQRICLILLIVFTCAA 70
           SVGFTGA  FILAVIW +SFG +LV +HC  WRI  K K S+  ++RIC ILLIVFTC A
Sbjct: 99  SVGFTGAPGFILAVIWLLSFGSLLVVYHCFKWRICDKAKGSSFDTRRICFILLIVFTCVA 158

Query: 71  AIGCILLSVGQDEFHGEAMHTLKYVVNQSDYTVKTLRNVTEYLSLAKTINVAQVFLPSAV 130
           A+GCILLSVGQD+FH EAMHTLKYVVNQSDYTV+ L+NVT+YLSLAKTINV Q+ +PS V
Sbjct: 159 AVGCILLSVGQDKFHTEAMHTLKYVVNQSDYTVEILQNVTQYLSLAKTINVTQIVIPSDV 218

Query: 131 MDDIDKLNRDLSTAANTLADKTSENSAKIRKVFNAVRSALITVAALMLLLSIIGLFLSIL 190
           M +IDKLN +L+TAA TL + T++N+AKI++VF AVRSALITVA +ML+LS +GL LS+L
Sbjct: 219 MGEIDKLNVNLNTAAVTLGETTTDNAAKIKRVFYAVRSALITVATVMLILSFVGLLLSVL 278

Query: 191 RHKHAIHIFILSGWLLVAITFILCGVFVILNNAISDTCMAMDEWVDHPHAETALSNILPC 250
           RH+H +HIF++SGW+LVA+TF+LCGVF+ILNNAISDTC+AM EWVD+PHAETALS+ILPC
Sbjct: 279 RHQHVVHIFVVSGWILVAVTFVLCGVFLILNNAISDTCVAMKEWVDNPHAETALSSILPC 338

Query: 251 VDQRTTNKSLIQSKEVITDIVNVVNQFVYNIANANPSQDYIYYYNQTGPVMPPLCYPYDS 310
           VDQ+TTN++L QSK VI  IV VVN FVY +AN NP+     YYNQ+GP MPPLC P+D+
Sbjct: 339 VDQQTTNQTLSQSKVVINSIVTVVNTFVYAVANTNPAPGQDRYYNQSGPPMPPLCIPFDA 398

Query: 311 QLQDRQCGSYEVSIANASKVWQNYTCELSTSGSSAFGRCNSVGRVTPYFYKELVSAVTEI 370
            ++DRQC  +E+SI NAS VW+NY CE++ SG      C +VGRVTP  + +LV+AV E 
Sbjct: 399 NMEDRQCSPWELSIENASSVWENYKCEVTPSGI-----CTTVGRVTPDTFGQLVAAVNES 453

Query: 371 YALQLYTPRLLSLQDCNFVRDTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWI 430
           YAL+ YTP LLS +DCNFVR+TF +ITS+YCPPL   L+IVNAGLG+IS GVLLCL+LWI
Sbjct: 454 YALEHYTPPLLSFRDCNFVRETFMSITSDYCPPLVRNLRIVNAGLGLISVGVLLCLVLWI 513

Query: 431 LYANRPQREEVFVNLPLP 448
            YANRPQREEVF + P P
Sbjct: 514 FYANRPQREEVFAD-PHP 530

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|110740574|dbj|BAE98392.1| hypothetical protein [Arabidopsis thaliana]

 Score =  615 bits (1585), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 295/438 (67%), Positives = 361/438 (82%), Gaps = 7/438 (1%)

Query: 12  SVGFTGASAFILAVIWFISFGLVLVAHHCCGWRINIKGKESA-SSQRICLILLIVFTCAA 70
           SVGFTGA  FILAVIW +SFG +LV +HC  WRI  K K S+  ++RIC ILLIVFTC A
Sbjct: 99  SVGFTGAPGFILAVIWLLSFGSLLVVYHCFKWRICDKAKGSSFDTRRICFILLIVFTCVA 158

Query: 71  AIGCILLSVGQDEFHGEAMHTLKYVVNQSDYTVKTLRNVTEYLSLAKTINVAQVFLPSAV 130
           A+GCILLSVGQD+FH EAMHTLKYVVNQSDYTV+ L+NVT+YLSLAKTINV Q+ +PS V
Sbjct: 159 AVGCILLSVGQDKFHTEAMHTLKYVVNQSDYTVEILQNVTQYLSLAKTINVTQIVIPSDV 218

Query: 131 MDDIDKLNRDLSTAANTLADKTSENSAKIRKVFNAVRSALITVAALMLLLSIIGLFLSIL 190
           M +IDKLN +L+TAA TL + T++N+AKI++VF AVRSALITVA +ML+LS +GL LS+L
Sbjct: 219 MGEIDKLNVNLNTAAVTLGETTTDNAAKIKRVFYAVRSALITVATVMLILSFVGLLLSVL 278

Query: 191 RHKHAIHIFILSGWLLVAITFILCGVFVILNNAISDTCMAMDEWVDHPHAETALSNILPC 250
           RH+H +HIF++SGW+LVA+TF+LCGVF+ILNNAISDTC+AM EWVD+PHAETALS+ILPC
Sbjct: 279 RHQHVVHIFVVSGWILVAVTFVLCGVFLILNNAISDTCVAMKEWVDNPHAETALSSILPC 338

Query: 251 VDQRTTNKSLIQSKEVITDIVNVVNQFVYNIANANPSQDYIYYYNQTGPVMPPLCYPYDS 310
           VDQ+TTN++L QSK VI  IV VVN FVY +AN NP+     YYNQ+GP MPPLC P+D+
Sbjct: 339 VDQQTTNQTLSQSKVVINSIVTVVNTFVYAVANTNPAPGQDRYYNQSGPPMPPLCIPFDA 398

Query: 311 QLQDRQCGSYEVSIANASKVWQNYTCELSTSGSSAFGRCNSVGRVTPYFYKELVSAVTEI 370
            ++DRQC  +E+SI NAS VW+NY CE++ SG      C +VGRVTP  + +LV+AV E 
Sbjct: 399 NMEDRQCSPWELSIENASSVWENYKCEVTPSGI-----CTTVGRVTPDTFGQLVAAVNES 453

Query: 371 YALQLYTPRLLSLQDCNFVRDTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWI 430
           YAL+ YTP LLS +DC+FVR+TF +ITS+YCPPL   L+IVNAGLG+IS GVLLCL+LWI
Sbjct: 454 YALEHYTPPLLSFRDCSFVRETFMSITSDYCPPLVRNLRIVNAGLGLISVGVLLCLVLWI 513

Query: 431 LYANRPQREEVFVNLPLP 448
            YANRPQREEVF + P P
Sbjct: 514 FYANRPQREEVFAD-PHP 530

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297838929|ref|XP_002887346.1| hypothetical protein ARALYDRAFT_476243 [Arabidopsis lyrata subsp. lyrata] gi|297333187|gb|EFH63605.1| hypothetical protein ARALYDRAFT_476243 [Arabidopsis lyrata subsp. lyrata]

 Score =  614 bits (1584), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 293/443 (66%), Positives = 360/443 (81%), Gaps = 6/443 (1%)

Query: 12  SVGFTGASAFILAVIWFISFGLVLVAHHCCGWRINIKGKESA-SSQRICLILLIVFTCAA 70
           SVGFTGA  FILAVIW +SFG +LV +HC  WR+ +K K S+  S+R C ILLIVFTC A
Sbjct: 99  SVGFTGAPGFILAVIWLLSFGSLLVVYHCFKWRLCVKAKGSSFDSRRFCFILLIVFTCVA 158

Query: 71  AIGCILLSVGQDEFHGEAMHTLKYVVNQSDYTVKTLRNVTEYLSLAKTINVAQVFLPSAV 130
           A+GCILLSVGQD+FH EAM TLKYVVNQSDYTV+ L+NVT+YLSLAKTINV  + +P  V
Sbjct: 159 AVGCILLSVGQDKFHTEAMRTLKYVVNQSDYTVEILQNVTQYLSLAKTINVTAISIPPNV 218

Query: 131 MDDIDKLNRDLSTAANTLADKTSENSAKIRKVFNAVRSALITVAALMLLLSIIGLFLSIL 190
           MD+IDKLN +L+ AA TL +KT + +AKI++V  AVRSALITVA +ML+LS +GL LS+L
Sbjct: 219 MDEIDKLNVNLNNAAVTLGEKTPDTAAKIKRVVYAVRSALITVATVMLILSFVGLLLSVL 278

Query: 191 RHKHAIHIFILSGWLLVAITFILCGVFVILNNAISDTCMAMDEWVDHPHAETALSNILPC 250
           RH+H +HIF++SGW+LVA+TF+LCGVF+ILNNAISDTC+AM EWVDHPHAETALS+ILPC
Sbjct: 279 RHQHVVHIFVVSGWILVAVTFVLCGVFLILNNAISDTCVAMKEWVDHPHAETALSSILPC 338

Query: 251 VDQRTTNKSLIQSKEVITDIVNVVNQFVYNIANANPSQDYIYYYNQTGPVMPPLCYPYDS 310
           VDQ+TTN++L QSK VI  IV VVN FVY +AN NPS     YYNQ+GP MPPLC P+D+
Sbjct: 339 VDQQTTNQTLAQSKVVINSIVTVVNTFVYAVANTNPSPGQDRYYNQSGPPMPPLCIPFDA 398

Query: 311 QLQDRQCGSYEVSIANASKVWQNYTCELSTSGSSAFGRCNSVGRVTPYFYKELVSAVTEI 370
            ++DRQC  +E+SI NAS VW+NY CE++ SG      C +VGRVTP  + +LV+AV E 
Sbjct: 399 NMEDRQCSPWELSIENASSVWENYQCEVTQSGV-----CTTVGRVTPDTFGQLVAAVNES 453

Query: 371 YALQLYTPRLLSLQDCNFVRDTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWI 430
           YAL+ YTP+LLS +DCNFVRDTF++ITS+YCPPLE  L+IV AGLG+IS GVLLCL+LWI
Sbjct: 454 YALEHYTPQLLSFRDCNFVRDTFKSITSDYCPPLERNLRIVTAGLGLISVGVLLCLVLWI 513

Query: 431 LYANRPQREEVFVNLPLPIKCIS 453
            YANRPQR+EVF +    +K +S
Sbjct: 514 FYANRPQRKEVFADPHPQVKDVS 536

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359472887|ref|XP_002280363.2| PREDICTED: uncharacterized protein LOC100254373 [Vitis vinifera]

 Score =  612 bits (1578), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 312/439 (71%), Positives = 367/439 (83%), Gaps = 5/439 (1%)

Query: 12  SVGFTGASAFILAVIWFISFGLVLVAHHCCGWRINIKGKESASSQRICLILLIVFTCAAA 71
           SVGFTGA  FILA +W +SFGL LV H+CCGWRIN KG  S  S+R+ LI+LI+FTCAAA
Sbjct: 99  SVGFTGAFGFILAFLWLVSFGLALVVHYCCGWRINAKGNGSDHSERVSLIMLILFTCAAA 158

Query: 72  IGCILLSVGQDEFHGEAMHTLKYVVNQSDYTVKTLRNVTEYLSLAKTINVAQVFLPSAVM 131
           IGCILLS+GQDEFH EA+HTL YVVNQSDYTV+TL NVT+YL+LAKTI VAQV LPS V 
Sbjct: 159 IGCILLSIGQDEFHREALHTLHYVVNQSDYTVQTLINVTQYLTLAKTIKVAQVLLPSNVN 218

Query: 132 DDIDKLNRDLSTAANTLADKTSENSAKIRKVFNAVRSALITVAALMLLLSIIGLFLSILR 191
           DDIDKLN DL+ AAN L +KTSENSAKI+KVFN V+SALITVAA+MLLLS++G FLSIL 
Sbjct: 219 DDIDKLNVDLNKAANDLKEKTSENSAKIKKVFNTVQSALITVAAVMLLLSLLGFFLSILG 278

Query: 192 HKHAIHIFILSGWLLVAITFILCGVFVILNNAISDTCMAMDEWVDHPHAETALSNILPCV 251
           H+HAIH+FI+ GWLLV ITF+LCGVFVILNNAI+DTCMAM EW+D+P +E+ALSNILPCV
Sbjct: 279 HQHAIHVFIVGGWLLVVITFMLCGVFVILNNAITDTCMAMGEWMDNPQSESALSNILPCV 338

Query: 252 DQRTTNKSLIQSKEVITDIVNVVNQFVYNIANANPSQDYIYYYNQTGPVMPPLCYPYDSQ 311
           DQRT+N++LI+SKEV+T+IVNVVNQF+Y  ANANPS   + YYNQ+GP+MPPLCYPYDS 
Sbjct: 339 DQRTSNQTLIKSKEVVTNIVNVVNQFIYTYANANPSPTDLNYYNQSGPLMPPLCYPYDSN 398

Query: 312 LQDRQCGSYEVSIANASKVWQNYTCELSTSGSSAFGRCNSVGRVTPYFYKELVSAVTEIY 371
           LQDRQCGS EVS+ NAS VW+NY C       S  G CN+ GRVT   Y +LV+AV E Y
Sbjct: 399 LQDRQCGSIEVSMENASVVWKNYVCT-----KSELGLCNNEGRVTQDTYTQLVAAVNESY 453

Query: 372 ALQLYTPRLLSLQDCNFVRDTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWIL 431
           AL+ YTP LLSLQ+CNFV+DTF+ I + YC PLEH L++V+AGLG+IS GV+LCL+LWI 
Sbjct: 454 ALEHYTPLLLSLQNCNFVQDTFREIKTRYCHPLEHDLQMVDAGLGLISVGVMLCLVLWIF 513

Query: 432 YANRPQREEVFVNLPLPIK 450
           YAN PQRE VFV L  PI+
Sbjct: 514 YANHPQREGVFVTLFSPIR 532

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297737727|emb|CBI26928.3| unnamed protein product [Vitis vinifera]

 Score =  612 bits (1577), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 312/439 (71%), Positives = 367/439 (83%), Gaps = 5/439 (1%)

Query: 12  SVGFTGASAFILAVIWFISFGLVLVAHHCCGWRINIKGKESASSQRICLILLIVFTCAAA 71
           SVGFTGA  FILA +W +SFGL LV H+CCGWRIN KG  S  S+R+ LI+LI+FTCAAA
Sbjct: 221 SVGFTGAFGFILAFLWLVSFGLALVVHYCCGWRINAKGNGSDHSERVSLIMLILFTCAAA 280

Query: 72  IGCILLSVGQDEFHGEAMHTLKYVVNQSDYTVKTLRNVTEYLSLAKTINVAQVFLPSAVM 131
           IGCILLS+GQDEFH EA+HTL YVVNQSDYTV+TL NVT+YL+LAKTI VAQV LPS V 
Sbjct: 281 IGCILLSIGQDEFHREALHTLHYVVNQSDYTVQTLINVTQYLTLAKTIKVAQVLLPSNVN 340

Query: 132 DDIDKLNRDLSTAANTLADKTSENSAKIRKVFNAVRSALITVAALMLLLSIIGLFLSILR 191
           DDIDKLN DL+ AAN L +KTSENSAKI+KVFN V+SALITVAA+MLLLS++G FLSIL 
Sbjct: 341 DDIDKLNVDLNKAANDLKEKTSENSAKIKKVFNTVQSALITVAAVMLLLSLLGFFLSILG 400

Query: 192 HKHAIHIFILSGWLLVAITFILCGVFVILNNAISDTCMAMDEWVDHPHAETALSNILPCV 251
           H+HAIH+FI+ GWLLV ITF+LCGVFVILNNAI+DTCMAM EW+D+P +E+ALSNILPCV
Sbjct: 401 HQHAIHVFIVGGWLLVVITFMLCGVFVILNNAITDTCMAMGEWMDNPQSESALSNILPCV 460

Query: 252 DQRTTNKSLIQSKEVITDIVNVVNQFVYNIANANPSQDYIYYYNQTGPVMPPLCYPYDSQ 311
           DQRT+N++LI+SKEV+T+IVNVVNQF+Y  ANANPS   + YYNQ+GP+MPPLCYPYDS 
Sbjct: 461 DQRTSNQTLIKSKEVVTNIVNVVNQFIYTYANANPSPTDLNYYNQSGPLMPPLCYPYDSN 520

Query: 312 LQDRQCGSYEVSIANASKVWQNYTCELSTSGSSAFGRCNSVGRVTPYFYKELVSAVTEIY 371
           LQDRQCGS EVS+ NAS VW+NY C       S  G CN+ GRVT   Y +LV+AV E Y
Sbjct: 521 LQDRQCGSIEVSMENASVVWKNYVCT-----KSELGLCNNEGRVTQDTYTQLVAAVNESY 575

Query: 372 ALQLYTPRLLSLQDCNFVRDTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWIL 431
           AL+ YTP LLSLQ+CNFV+DTF+ I + YC PLEH L++V+AGLG+IS GV+LCL+LWI 
Sbjct: 576 ALEHYTPLLLSLQNCNFVQDTFREIKTRYCHPLEHDLQMVDAGLGLISVGVMLCLVLWIF 635

Query: 432 YANRPQREEVFVNLPLPIK 450
           YAN PQRE VFV L  PI+
Sbjct: 636 YANHPQREGVFVTLFSPIR 654

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356536222|ref|XP_003536638.1| PREDICTED: uncharacterized protein LOC100791428 [Glycine max]

 Score =  605 bits (1560), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 304/437 (69%), Positives = 357/437 (81%), Gaps = 5/437 (1%)

Query: 12  SVGFTGASAFILAVIWFISFGLVLVAHHCCGWRINIKGKESASSQRICLILLIVFTCAAA 71
           SVGFTGA+ FILAV+WFISFGL L+ H CCGW INIK K S  SQRICLILLI FT AAA
Sbjct: 104 SVGFTGAAGFILAVLWFISFGLALMIHLCCGWGINIKDKGSNHSQRICLILLISFTFAAA 163

Query: 72  IGCILLSVGQDEFHGEAMHTLKYVVNQSDYTVKTLRNVTEYLSLAKTINVAQVFLPSAVM 131
            GCILLSV QD+FHG+A+ TL Y VNQSDYTV+TLRNVTEYLSLAKTINV Q+ LPS VM
Sbjct: 164 TGCILLSVAQDKFHGQALDTLHYFVNQSDYTVQTLRNVTEYLSLAKTINVTQILLPSDVM 223

Query: 132 DDIDKLNRDLSTAANTLADKTSENSAKIRKVFNAVRSALITVAALMLLLSIIGLFLSILR 191
           D IDKLN DL++AA+TL++KT+ENS KIR+VFN VR AL  VAA+MLLL+++GL LS+L 
Sbjct: 224 DGIDKLNVDLNSAADTLSEKTNENSVKIRRVFNDVRLALYVVAAVMLLLALVGLVLSVLG 283

Query: 192 HKHAIHIFILSGWLLVAITFILCGVFVILNNAISDTCMAMDEWVDHPHAETALSNILPCV 251
           ++HAI IF+++GWLLVA TFILCGVF+ILNNAISDTCMAM EWV +P  E+ALSN+LPCV
Sbjct: 284 YRHAILIFVITGWLLVATTFILCGVFIILNNAISDTCMAMGEWVANPRTESALSNVLPCV 343

Query: 252 DQRTTNKSLIQSKEVITDIVNVVNQFVYNIANANPSQDYIYYYNQTGPVMPPLCYPYDSQ 311
           DQRTTNK+L QSK+VI +I +VVN F++  AN N +Q    YYNQ+GP MP LCYP+DSQ
Sbjct: 344 DQRTTNKTLFQSKQVINNIASVVNTFIFATANINETQGSPGYYNQSGPRMPSLCYPFDSQ 403

Query: 312 LQDRQCGSYEVSIANASKVWQNYTCELSTSGSSAFGRCNSVGRVTPYFYKELVSAVTEIY 371
            Q+RQC   EVS ANAS+VW+NY CE+S SG      C +VGRVTP  Y ++V+AV E Y
Sbjct: 404 FQERQCTDQEVSSANASRVWKNYECEVSESGI-----CTTVGRVTPQIYLQIVAAVNESY 458

Query: 372 ALQLYTPRLLSLQDCNFVRDTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWIL 431
           AL+ YTP LLSLQ+CNFVRD F  ITS+YCPPL HYLKI+N GLG+IS GVLLCL+LWIL
Sbjct: 459 ALEHYTPPLLSLQNCNFVRDAFTKITSSYCPPLNHYLKIINVGLGLISVGVLLCLVLWIL 518

Query: 432 YANRPQREEVFVNLPLP 448
           YANRP+R EVF    LP
Sbjct: 519 YANRPRRREVFEKSSLP 535

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356575630|ref|XP_003555941.1| PREDICTED: uncharacterized protein LOC100794625 [Glycine max]

 Score =  604 bits (1557), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 304/437 (69%), Positives = 358/437 (81%), Gaps = 5/437 (1%)

Query: 12  SVGFTGASAFILAVIWFISFGLVLVAHHCCGWRINIKGKESASSQRICLILLIVFTCAAA 71
           SVGFTGA+ FILAV+WFISFGL L+ H C GW INIKGK S  SQRICLILLI FT AAA
Sbjct: 97  SVGFTGAAGFILAVLWFISFGLALMIHLCFGWGINIKGKGSNHSQRICLILLISFTFAAA 156

Query: 72  IGCILLSVGQDEFHGEAMHTLKYVVNQSDYTVKTLRNVTEYLSLAKTINVAQVFLPSAVM 131
            GCILLSVGQD+FHG+A+ TL Y VNQSDYTV+TLRNVTEYLSLAKTINV ++ LPS VM
Sbjct: 157 TGCILLSVGQDKFHGQALDTLHYFVNQSDYTVQTLRNVTEYLSLAKTINVTRILLPSDVM 216

Query: 132 DDIDKLNRDLSTAANTLADKTSENSAKIRKVFNAVRSALITVAALMLLLSIIGLFLSILR 191
           D IDKLN DL+++A+TL++KT+ENS KIR+VFN VR AL  VAA+MLLL+++GL LS+L 
Sbjct: 217 DGIDKLNVDLNSSADTLSEKTNENSVKIRRVFNDVRLALYVVAAVMLLLALVGLVLSVLG 276

Query: 192 HKHAIHIFILSGWLLVAITFILCGVFVILNNAISDTCMAMDEWVDHPHAETALSNILPCV 251
           ++HAI IF+++GWLLVA TF+LCGVF+ILNNAISDTC+AM EWV +PH E+ALSN+LPCV
Sbjct: 277 YQHAILIFVITGWLLVATTFVLCGVFIILNNAISDTCVAMGEWVANPHTESALSNVLPCV 336

Query: 252 DQRTTNKSLIQSKEVITDIVNVVNQFVYNIANANPSQDYIYYYNQTGPVMPPLCYPYDSQ 311
           DQRTTNK+L QSK+VI +I NVVN F+Y  AN N +Q     YNQ+GP MP LCYP+DSQ
Sbjct: 337 DQRTTNKTLFQSKQVINNIANVVNTFIYATANINVTQGSPGSYNQSGPRMPTLCYPFDSQ 396

Query: 312 LQDRQCGSYEVSIANASKVWQNYTCELSTSGSSAFGRCNSVGRVTPYFYKELVSAVTEIY 371
            Q+RQC   EVS ANAS VW+NY CE+S SG      C +VGRVTP  Y ++V+AV EIY
Sbjct: 397 FQERQCTDQEVSSANASMVWKNYECEVSESGI-----CTTVGRVTPEIYLQIVAAVNEIY 451

Query: 372 ALQLYTPRLLSLQDCNFVRDTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWIL 431
           AL+ YTP LLSLQ+CNFVRD F  ITS+YCPPL HYLKI+N GLG+IS GVLLCL+LWIL
Sbjct: 452 ALEHYTPPLLSLQNCNFVRDAFTKITSSYCPPLNHYLKIINVGLGLISVGVLLCLVLWIL 511

Query: 432 YANRPQREEVFVNLPLP 448
           YANRP+R EVF    LP
Sbjct: 512 YANRPRRREVFEKSSLP 528

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356566456|ref|XP_003551447.1| PREDICTED: uncharacterized protein LOC100819610 [Glycine max]

 Score =  597 bits (1539), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 292/427 (68%), Positives = 354/427 (82%), Gaps = 5/427 (1%)

Query: 12  SVGFTGASAFILAVIWFISFGLVLVAHHCCGWRINIKGKESASSQRICLILLIVFTCAAA 71
           SVGFTG +   LAV+WFISFGL LV H CCGW INIK K S   QRI  +LL++FTC   
Sbjct: 104 SVGFTGVAGLTLAVLWFISFGLALVIHLCCGWGINIKDKGSNRLQRIWFVLLLLFTCVVT 163

Query: 72  IGCILLSVGQDEFHGEAMHTLKYVVNQSDYTVKTLRNVTEYLSLAKTINVAQVFLPSAVM 131
            GCI+LS GQD+FHGEA+ TL YVVNQSDYTV+TLRNVTEYL+LAKTI VA++FLPS +M
Sbjct: 164 TGCIVLSFGQDKFHGEAVDTLHYVVNQSDYTVQTLRNVTEYLALAKTIAVAEMFLPSNIM 223

Query: 132 DDIDKLNRDLSTAANTLADKTSENSAKIRKVFNAVRSALITVAALMLLLSIIGLFLSILR 191
           DDIDKLN DL++AANTL+++T ENS KIRKVFNAVR ALI ++A+MLLL++IGL LSIL 
Sbjct: 224 DDIDKLNVDLNSAANTLSEQTKENSFKIRKVFNAVRLALIMMSAMMLLLALIGLILSILG 283

Query: 192 HKHAIHIFILSGWLLVAITFILCGVFVILNNAISDTCMAMDEWVDHPHAETALSNILPCV 251
           ++HAI +F++SGWLLVA TFILCGVF ILNNAI DTCMAM EWV++PHAE+ALSNILPCV
Sbjct: 284 YQHAILVFVISGWLLVATTFILCGVFTILNNAICDTCMAMGEWVENPHAESALSNILPCV 343

Query: 252 DQRTTNKSLIQSKEVITDIVNVVNQFVYNIANANPSQDYIYYYNQTGPVMPPLCYPYDSQ 311
           DQRTTNK+L QSK+V+T+IV++VN+F+Y+ A+A+P+Q  + YYNQ+GP MPPLCYP+DSQ
Sbjct: 344 DQRTTNKTLFQSKQVVTNIVSIVNRFIYDTADASPAQGSMNYYNQSGPAMPPLCYPFDSQ 403

Query: 312 LQDRQCGSYEVSIANASKVWQNYTCELSTSGSSAFGRCNSVGRVTPYFYKELVSAVTEIY 371
            ++RQC   EVS ANAS VW+ Y C+     +S +G C ++GRVTP  Y ELV  V E Y
Sbjct: 404 FRERQCTPQEVSSANASLVWKRYECK-----TSEYGVCTTIGRVTPEIYLELVQVVNESY 458

Query: 372 ALQLYTPRLLSLQDCNFVRDTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWIL 431
           AL+ YTP LLSLQ+CNFVR TF+ ITS YCPPL HYLK++N GLG+IS GVLLCL+LWIL
Sbjct: 459 ALEHYTPLLLSLQNCNFVRHTFKEITSRYCPPLNHYLKVINVGLGLISIGVLLCLVLWIL 518

Query: 432 YANRPQR 438
           YANRPQ+
Sbjct: 519 YANRPQK 525

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	465
TAIR|locus:2026276	557	AT1G71110 "AT1G71110" [Arabido	0.926	0.773	0.655	1.7e-153
TAIR|locus:2046079	541	AT2G12400 "AT2G12400" [Arabido	0.926	0.796	0.399	2e-88
TAIR|locus:2059567	545	AT2G25270 [Arabidopsis thalian	0.907	0.774	0.368	7.6e-80
TAIR|locus:2198923	538	AT1G80540 "AT1G80540" [Arabido	0.911	0.788	0.311	1.2e-63
TAIR|locus:2158581	509	AT5G67550 "AT5G67550" [Arabido	0.507	0.463	0.207	6.1e-10

TAIR|locus:2026276 AT1G71110 "AT1G71110" [Arabidopsis thaliana (taxid:3702)]

 Score = 1497 (532.0 bits), Expect = 1.7e-153, P = 1.7e-153
 Identities = 287/438 (65%), Positives = 348/438 (79%)

Query:    12 SVGFTGASAFILAVIWFISFGLVLVAHHCCGWRINIKGKESA-SSQRICLILLIVFTCAA 70
             SVGFTGA  FILAVIW +SFG +LV +HC  WRI  K K S+  ++RIC ILLIVFTC A
Sbjct:    99 SVGFTGAPGFILAVIWLLSFGSLLVVYHCFKWRICDKAKGSSFDTRRICFILLIVFTCVA 158

Query:    71 AIGCILLSVGQDEFHGEAMHTLKYVVNQSDYTVKTLRNVTEYLSLAKTINVAQVFLPSAV 130
             A+GCILLSVGQD+FH EAMHTLKYVVNQSDYTV+ L+NVT+YLSLAKTINV Q+ +PS V
Sbjct:   159 AVGCILLSVGQDKFHTEAMHTLKYVVNQSDYTVEILQNVTQYLSLAKTINVTQIVIPSDV 218

Query:   131 MDDIDKLNRDLSTAANTLADKTSENSAKIRKVFNAVRSALITVAAXXXXXXXXXXXXXXX 190
             M +IDKLN +L+TAA TL + T++N+AKI++VF AVRSALITVA                
Sbjct:   219 MGEIDKLNVNLNTAAVTLGETTTDNAAKIKRVFYAVRSALITVATVMLILSFVGLLLSVL 278

Query:   191 RHKHAIHIFILSGWLLVAITFILCGVFVILNNAISDTCMAMDEWVDHPHAETALSNILPC 250
             RH+H +HIF++SGW+LVA+TF+LCGVF+ILNNAISDTC+AM EWVD+PHAETALS+ILPC
Sbjct:   279 RHQHVVHIFVVSGWILVAVTFVLCGVFLILNNAISDTCVAMKEWVDNPHAETALSSILPC 338

Query:   251 VDQRTTNKSLIQSKEVITDIVNVVNQFVYNIANANPSQDYIYYYNQTGPVMPPLCYPYDS 310
             VDQ+TTN++L QSK VI  IV VVN FVY +AN NP+     YYNQ+GP MPPLC P+D+
Sbjct:   339 VDQQTTNQTLSQSKVVINSIVTVVNTFVYAVANTNPAPGQDRYYNQSGPPMPPLCIPFDA 398

Query:   311 QLQDRQCGSYEVSIANASKVWQNYTCELSTSGSSAFGRCNSVGRVTPYFYKELVSAVTEI 370
              ++DRQC  +E+SI NAS VW+NY CE++ SG      C +VGRVTP  + +LV+AV E 
Sbjct:   399 NMEDRQCSPWELSIENASSVWENYKCEVTPSGI-----CTTVGRVTPDTFGQLVAAVNES 453

Query:   371 YALQLYTPRLLSLQDCNFVRDTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWI 430
             YAL+ YTP LLS +DCNFVR+TF +ITS+YCPPL   L+IVNAGLG+IS GVLLCL+LWI
Sbjct:   454 YALEHYTPPLLSFRDCNFVRETFMSITSDYCPPLVRNLRIVNAGLGLISVGVLLCLVLWI 513

Query:   431 LYANRPQREEVFVNLPLP 448
              YANRPQREEVF + P P
Sbjct:   514 FYANRPQREEVFAD-PHP 530

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2046079 AT2G12400 "AT2G12400" [Arabidopsis thaliana (taxid:3702)]

 Score = 883 (315.9 bits), Expect = 2.0e-88, P = 2.0e-88
 Identities = 177/443 (39%), Positives = 274/443 (61%)

Query:     4 IFSSLCMQSVGFTGASAFILAVIWFISFGL---VLVAHHCCGWRINIKGKESASSQRICL 60
             I +S  + SVG+T A   I+A++WF+ FGL   ++   +CC  R +  G  S  +  + L
Sbjct:    90 ISNSHYLTSVGYTAAPFIIIALVWFVFFGLSLSLICLCYCCCARQSY-GY-SRVAYALSL 147

Query:    61 ILLIVFTCAAAIGCILLSVGQDEFHGEAMHTLKYVVNQSDYTVKTLRNVTEYLSLAKTIN 120
             ILLI FT AA IGC+ L  GQ +FH     TL YVV+Q++ T + LRNV++YL+ AK ++
Sbjct:   148 ILLISFTIAAIIGCVFLYTGQGKFHASTTDTLDYVVSQANLTSENLRNVSDYLNAAKKVD 207

Query:   121 VAQVFLPSAVMDDIDKLNRDLSTAANTLADKTSENSAKIRKVFNAVRSALITVAAXXXXX 180
             V    LP  V+  ID +   ++++A TL+ KT EN  KI+ V + +R AL+ +AA     
Sbjct:   208 VQSSILPQDVLSSIDNIQGKINSSATTLSVKTMENQDKIQNVLDIMRLALVIIAAVMLFL 267

Query:   181 XXXXXXXXXXRHKHAIHIFILSGWLLVAITFILCGVFVILNNAISDTCMAMDEWVDHPHA 240
                         +  ++  ++ GW+LV +TF+LCG F++L+N + DTC+AMD+WV +P A
Sbjct:   268 AFIGFLLSIFGLQCLVYTLVILGWILVTVTFVLCGGFLLLHNVVGDTCVAMDQWVQNPTA 327

Query:   241 ETALSNILPCVDQRTTNKSLIQSKEVITDIVNVVNQFVYNIANAN-PSQDYIYYYNQTGP 299
              TAL +ILPCVD  T  ++L ++K V   +VN+++  + N+ N N P Q    YYNQ+GP
Sbjct:   328 HTALDDILPCVDNATARETLTRTKLVTYQLVNLLDNAISNMTNRNFPPQFRPLYYNQSGP 387

Query:   300 VMPPLCYPYDSQLQDRQCGSYEVSIANASKVWQNYTCELSTSGSSAFGRCNSVGRVTPYF 359
             +MP LC P+++ L DRQC   +V + NA++VW+N+TC++ T G+     C++ GR+TP  
Sbjct:   388 LMPLLCNPFNADLSDRQCQPGQVHLNNATEVWKNFTCQIVTPGT-----CSTPGRLTPKL 442

Query:   360 YKELVSAVTEIYALQLYTPRLLSLQDCNFVRDTFQNITSNYCPPLEHYLKIVNAGLGMIS 419
             Y ++ +AV   Y L  Y P L  LQ C+FVR TF +I  ++CP L+ Y + +  GL ++S
Sbjct:   443 YSQMAAAVNVSYGLYKYGPFLADLQGCDFVRSTFTDIERDHCPGLKRYTQWIYVGLVVVS 502

Query:   420 FGVLLCLLLWILYANRPQREEVF 442
               V+  L+ W++YA R +R  V+
Sbjct:   503 ASVMSSLVFWVIYA-RERRHRVY 524

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2059567 AT2G25270 [Arabidopsis thaliana (taxid:3702)]

 Score = 802 (287.4 bits), Expect = 7.6e-80, P = 7.6e-80
 Identities = 160/434 (36%), Positives = 259/434 (59%)

Query:    12 SVGFTGASAFILAVIWFISFG---LVLVAHHCCGWRINIKGKESASSQRICLILLIVFTC 68
             SV +T    F+LA +WF+ FG   LV+   H C  R N  G  S  +  + LI L++FT 
Sbjct:   103 SVSYTAVPLFVLAAVWFLGFGICLLVICMCHICH-RTNSVGY-SKVAYVVSLIFLLIFTV 160

Query:    69 AAAIGCILLSVGQDEFHGEAMHTLKYVVNQSDYTVKTLRNVTEYLSLAKTINVAQVFLPS 128
              A IGC+LL  GQ  ++     TL+YV++Q+D T+  LR +++YL+ AK   V QV LP+
Sbjct:   161 IAIIGCVLLYSGQIRYNKSTTETLEYVMSQADSTISQLRAISDYLASAKQAAVLQVLLPA 220

Query:   129 AVMDDIDKLNRDLSTAANTLADKTSENSAKIRKVFNAVRSALITVAAXXXXXXXXXXXXX 188
              V  +ID++   L ++  T+ +K++ +S  IR   ++VR ALI V+              
Sbjct:   221 NVQTEIDQIGVKLDSSVATITEKSTNSSNHIRHFLDSVRVALIVVSIVMLVVTFLGLVSS 280

Query:   189 XXRHKHAIHIFILSGWLLVAITFILCGVFVILNNAISDTCMAMDEWVDHPHAETALSNIL 248
                 +  ++  ++ GW+LV  TFIL G F++L+NA +DTC+AM EWV+ P + TAL  IL
Sbjct:   281 IFGMQVIVYTLVILGWILVTGTFILSGTFLVLHNATADTCVAMSEWVERPSSNTALDEIL 340

Query:   249 PCVDQRTTNKSLIQSKEVITDIVNVVNQFVYNIANANPSQDYI-YYYNQTGPVMPPLCYP 307
             PC D  T  ++L++S+EV   +V ++N  + N++N N S  ++  YYNQ+GP++P LC P
Sbjct:   341 PCTDNATAQETLMRSREVTGQLVELINTVITNVSNINFSPVFVPMYYNQSGPLLPLLCNP 400

Query:   308 YDSQLQDRQCGSYEVSIANASKVWQNYTCELSTSGSSAFGRCNSVGRVTPYFYKELVSAV 367
             ++  L DR C   ++ + NA++ W ++ C++S +G+     C + GR+TP  Y ++ S V
Sbjct:   401 FNHDLTDRSCSPGDLDLNNATEAWTSFVCQVSQNGT-----CTTTGRLTPALYSQMASGV 455

Query:   368 TEIYALQLYTPRLLSLQDCNFVRDTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLL 427
                  L    P L+ LQDC++ + TF++IT+++CP L+ Y   V  GL +++  V+L L+
Sbjct:   456 NISTGLIRDAPFLVQLQDCSYAKQTFRDITNDHCPGLQRYGYWVYVGLAILATAVMLSLM 515

Query:   428 LWILYAN-RPQREE 440
              WI+Y+  R  R+E
Sbjct:   516 FWIIYSRERRHRKE 529

GO:0005576 "extracellular region" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0031507 "heterochromatin assembly" evidence=RCA

GO:0045787 "positive regulation of cell cycle" evidence=RCA

TAIR|locus:2198923 AT1G80540 "AT1G80540" [Arabidopsis thaliana (taxid:3702)]

 Score = 649 (233.5 bits), Expect = 1.2e-63, P = 1.2e-63
 Identities = 139/446 (31%), Positives = 237/446 (53%)

Query:     4 IFSSLCMQSVGFTGASAFILAVIWFISFGLVLVAHH----CCGWRINIKGKESASSQRIC 59
             + +S  + SVGF+     ++A+ WF+  GL L+       CCG      G+ +    R+C
Sbjct:    89 VTNSHYIASVGFSAVPFIVIAIAWFVLLGLFLICSCLCCCCCGC-----GRRNYGYSRVC 143

Query:    60 ----LILLIVFTCAAAIGCILLSVGQDEFHGEAMHTLKYVVNQSDYTVKTLRNVTEYLSL 115
                 L+ L++FT AA IG  +L  GQ+EF+G    T  Y+V Q+   +  L ++ + +  
Sbjct:   144 YTLSLVFLLLFTIAAVIGSAMLYTGQNEFYGSVERTFMYIVKQATGVLTKLTSLWDSIQS 203

Query:   116 AKTINV-AQVFLPSAVMDDIDKLNRDLSTAANTLADKTSENSAK-IRKVFNAVRSALITV 173
             AK I +      P     +ID  N  +  +  T  D+ +  + + +    N VR  L  +
Sbjct:   204 AKDIQLDGHNLFPPEFRGNIDHFNNMIKMSNITYPDRVANQTIRYLTGALNPVRYVLNVI 263

Query:   174 AAXXXXXXXXXXXXXXXRHKHAIHIFILSGWLLVAITFILCGVFVILNNAISDTCMAMDE 233
             A                  +  +++ ++ GW+LV  T +L  VF++ +N ++DTCMAMD+
Sbjct:   264 AGVMLAVAFLGLLFSFCGLRVLVYLLVILGWILVTATILLSAVFLVFHNVVADTCMAMDQ 323

Query:   234 WVDHPHAETALSNILPCVDQRTTNKSLIQSKEVITDIVNVVNQFVYNIANANP-SQDYIY 292
             WV  P A++ALS +LPC+D +T  ++L  +K +    V++ N +  N++N +    +  +
Sbjct:   324 WVHDPAADSALSQLLPCLDPKTIGETLDITKTMTATAVDMTNAYTVNVSNHDQFPPNAPF 383

Query:   293 YYNQTGPVMPPLCYPYDSQLQDRQCGSYEVSIANASKVWQNYTCELSTSGSSAFGRCNSV 352
             Y+NQ+GP++P LC P D   + R C   EV +ANAS+V++ Y C+++  G      C + 
Sbjct:   384 YHNQSGPLVPLLCNPLDQNHKPRPCAPDEVLLANASQVYKGYICQVNAEGI-----CTTQ 438

Query:   353 GRVTPYFYKELVSAVTEIYALQLYTPRLLSLQDCNFVRDTFQNITSNYCPPLEHYLKIVN 412
             GR+T   Y +++ A+   + L  Y P L S+ DC FVRDTF++IT+  CP L    + + 
Sbjct:   439 GRLTQGSYDQMMGAINVAFTLDHYGPFLASIADCTFVRDTFRDITTKNCPGLSITSQWIY 498

Query:   413 AGLGMISFGVLLCLLLWILYANRPQR 438
             AGL  +S  V+  L+ W+++  R +R
Sbjct:   499 AGLASLSGAVMFSLIFWLIFV-RERR 523

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2158581 AT5G67550 "AT5G67550" [Arabidopsis thaliana (taxid:3702)]

 Score = 173 (66.0 bits), Expect = 6.1e-10, P = 6.1e-10
 Identities = 51/246 (20%), Positives = 105/246 (42%)

Query:   192 HKHAIHIFILSGWLLVAITFILCGVFVILNNAISDTCMAMDEWVDHPHAETALSNILPCV 251
             H   I +  L  W++  + ++L G    ++    D C A + +V +P   T L+N+ PC+
Sbjct:   244 HPGFIMVIFLC-WIITTLCWVLTGFDFFIHTFAEDLCSAFNGFVQNPRNST-LTNLFPCM 301

Query:   252 DQRTTNKSLIQSKEVITDIVNVVNQFVYNIANANPSQDY---IYYYNQTGPVMPPLCYPY 308
             D   ++K+LI+   +I + +  +N  V     +N   D    + +  ++G +  P     
Sbjct:   302 DPLHSDKTLIEISLMIHNFITQLNSKVAESMRSNALTDRSNTVSWAPESGIICDPFVGQQ 361

Query:   309 DSQLQDRQCGSYEVSIANASKVWQNYTCELSTSGSSAFGRCNSVGRVTPYF-YKELVSAV 367
              +    + C +  + I     +   +TC       +    C   G+  P   Y ++ +  
Sbjct:   362 INSYTPQSCSNGAIPIGEFPNILSRFTCHDKDPPET----CRITGKFIPEAAYLKVYAYS 417

Query:   368 TEIYALQLYTPRLLSLQDCNFVRDTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLL 427
                  +    P   +L +C  V+DT  +I SN C P    +  + A +  +S  +++ +L
Sbjct:   418 NSAQGMLDILPSFQNLTECLAVKDTLSSIVSNQCDPFRASMYRLWASILALSLIMVVLVL 477

Query:   428 LWILYA 433
             L++  A
Sbjct:   478 LFLAKA 483


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.135   0.411    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      465       450   0.00092  118 3  11 22  0.47    33
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  625 (66 KB)
  Total size of DFA:  286 KB (2149 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  38.73u 0.08s 38.81t   Elapsed:  00:00:01
  Total cpu time:  38.73u 0.08s 38.81t   Elapsed:  00:00:01
  Start:  Fri May 10 07:44:00 2013   End:  Fri May 10 07:44:01 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00101084 hypothetical protein (564 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	465
cd07912	418	Tweety_N N-terminal domain of the protein encoded	100.0
PF04906	406	Tweety: Tweety; InterPro: IPR006990 None of the me	99.94
KOG4433	526	consensus Tweety transmembrane/cell surface protei	99.87
PF05478	806	Prominin: Prominin; InterPro: IPR008795 The promin	98.46
cd07912	418	Tweety_N N-terminal domain of the protein encoded	96.81
KOG4331	865	consensus Polytopic membrane protein Prominin [Gen	96.59
PF04906	406	Tweety: Tweety; InterPro: IPR006990 None of the me	95.18
PF05478	806	Prominin: Prominin; InterPro: IPR008795 The promin	93.63
KOG4433	526	consensus Tweety transmembrane/cell surface protei	87.0
PF00957	89	Synaptobrevin: Synaptobrevin; InterPro: IPR001388	86.79
PF03904	230	DUF334: Domain of unknown function (DUF334); Inter	83.55
KOG2348	667	consensus Urea transporter [Amino acid transport a	80.55

>cd07912 Tweety_N N-terminal domain of the protein encoded by the Drosophila tweety gene and related proteins, a family of chloride ion channels

Probab=100.00  E-value=2.3e-38  Score=330.09  Aligned_cols=354  Identities=18%  Similarity=0.227  Sum_probs=245.8

Q ss_pred             CcCCccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhCCcccCC---CCC-CchhHHHHHHHHHHHHHHHHHHHHhh
Q 012361            2 YLIFSSLCMQSVGFTGASAFILAVIWFISFGLVLVAHHCCGWRINIK---GKE-SASSQRICLILLIVFTCAAAIGCILL   77 (465)
Q Consensus         2 ~~i~~~hYwaSv~fTg~pgf~iA~~Wfi~fGl~l~~~~cc~~~~~~~---~~~-S~~~~~~slillilft~~ai~gc~vl   77 (465)
                      ++|.||||||||+|||    ++|++||+++|+++++++||+|||+++   +++ |..++.++++++++|+++++++   +
T Consensus        28 F~p~~~~Y~~Sv~~~a----~iaavwlil~ll~ll~~~~~~CCcr~~~~~~k~~s~~c~~~sLiiltL~~~aaIi~---~  100 (418)
T cd07912          28 FNPEDEIYQQSLLILA----SIPAACLILSLLFLLVYLITRCCDRKPTEERPRHSICCLKWSLVIATLLCCAAIGV---G  100 (418)
T ss_pred             CCCCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHH---H
Confidence            6899999999999999    599999998998888765554445443   333 6689999999999999988866   8


Q ss_pred             hcccchhhhhhhhhhhHHhccchHHHHHHHHHHHHHHhhhhhcccc-------cc-cC---chhhhhHHHHHHHHHHHHH
Q 012361           78 SVGQDEFHGEAMHTLKYVVNQSDYTVKTLRNVTEYLSLAKTINVAQ-------VF-LP---SAVMDDIDKLNRDLSTAAN  146 (465)
Q Consensus        78 ~~Gq~kfh~~~~~t~~~Vv~qad~tv~~lrnvt~~L~~ak~~~v~~-------~~-lP---~~~~~~id~l~~~Lns~A~  146 (465)
                      |+||++||++++++.+++ +++|+++++++|++++++++-+..+++       ++ -|   .|-.+.+..+++++.+.++
T Consensus       101 f~GN~~~h~gV~~t~~si-~~an~tv~~l~nqv~~l~~al~~t~~~~L~~L~~il~~~~~~~~~~~~~~~~q~~~~n~~~  179 (418)
T cd07912         101 LYGNDETHDGVVQLTYSL-RNANHTVAGIDNQTSDTEASLNVTVEPQLTNLEDIFDARVNKTDYLQIVQGLQQMATNAAQ  179 (418)
T ss_pred             hhccHHHhhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhhhhhHhHHHHHhCCCcchhhHHHHHHHHHHHHHHHHH
Confidence            999999999999999999 899999999999999999876555531       11 13   1222233334444444444


Q ss_pred             HHHHH-----hhhhHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhhc-hhhHHHHHHHHHHHHHHHHHHHHHH
Q 012361          147 TLADK-----TSENSAKIRKVFNAVRS----ALITVAALMLLLSIIGLFLSILR-HKHAIHIFILSGWLLVAITFILCGV  216 (465)
Q Consensus       147 ~i~~k-----~~~n~~~I~~~l~~v~~----~liiva~vml~l~~~glv~~~~~-~~~~~~~~~~~gwilv~~twil~G~  216 (465)
                      ++.+-     ...|...|.+-.+.++.    +.+.+..+.++++++++ +|+.+ .|+.+++|+++|.+.++++|++.|+
T Consensus       180 ~~~~~~~~~~~~~~l~~i~~~~~~~E~~Rw~~~l~lL~~~lviC~~~l-~gl~r~Sr~~li~~s~~g~l~l~~~W~~~~~  258 (418)
T cd07912         180 QLTGIPFWSLVGVSLTKLADQVSLYESYRWLAYLGLLSLLLVICLVLL-VGLARHSRCLLIVFSVCGLFALIISWLSLGL  258 (418)
T ss_pred             HHhccccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence            43222     23344445444443332    12333334445555554 55544 7899999999999999999999999


Q ss_pred             HHHHHhhhhhhhHhhHhhhcCCCCCCcccccccCCcccchhhHHHHhHHHHHHHHHHHhHHHHHhhhcCCCCCccccccc
Q 012361          217 FVILNNAISDTCMAMDEWVDHPHAETALSNILPCVDQRTTNKSLIQSKEVITDIVNVVNQFVYNIANANPSQDYIYYYNQ  296 (465)
Q Consensus       217 ~l~l~~~~~DtC~Am~e~~~~p~~~T~L~~iLPCvd~~~a~~~L~~~ke~i~~lv~~vN~~i~~i~n~n~~~~~~~yynq  296 (465)
                      |++.+++++|.|.++|+|+.+.+..+ ++   |                                       ....||.+
T Consensus       259 ~l~~~v~~sDfC~~pd~yi~~~~~~~-~~---~---------------------------------------di~~yy~~  295 (418)
T cd07912         259 YLASAVALSDFCVDPDDYVRNQTPSG-LS---S---------------------------------------DILQYYLT  295 (418)
T ss_pred             HHHHHHhhhhhhcCHHHHHHhccccc-cc---h---------------------------------------HHHHHHhc
Confidence            99999999999999999999886422 11   0                                       01247888


Q ss_pred             CCCCCCCCCCCCCCCcccccCCCccccccchhhccccceeecCCCCCCCcccccCCCccchhhHHHHHHHHHHHHHHHhh
Q 012361          297 TGPVMPPLCYPYDSQLQDRQCGSYEVSIANASKVWQNYTCELSTSGSSAFGRCNSVGRVTPYFYKELVSAVTEIYALQLY  376 (465)
Q Consensus       297 sgp~~p~lCnPf~~~~~~~~C~~gev~i~na~~v~~~~~C~~~~~~~~~~~~C~t~gr~tp~~y~q~~a~~n~~~~L~~~  376 (465)
                      +.+..   -|||...++..+     ..+.|..+.++...=..-.       .+.+.+   + ...++..-.|+....   
T Consensus       296 C~~~~---~npF~~~l~~~~-----~~l~~~~~~~~~~~~~~~~-------~~~~~~---~-~l~~~~~~ln~~e~~---  353 (418)
T cd07912         296 CEPST---TNPFQQRLTESQ-----RALTNMQSQVQGLLREAVF-------EFPTAE---D-NLLSLQGDLNSTEIN---  353 (418)
T ss_pred             CCCCC---CCcchHhhHHHH-----HHHHHHHHHHHHHHHHhcc-------cCCccc---c-hHHHHHHHHHHHHHH---
Confidence            87763   689988775432     2333443333221101100       111111   1 134455556665555   


Q ss_pred             hcccccCCCChhHHHHHHhhhhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012361          377 TPRLLSLQDCNFVRDTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWIL  431 (465)
Q Consensus       377 ~P~l~~L~~C~fVr~~F~~I~~~~C~~L~~~~~~v~~gl~~lS~~~~l~~i~Wi~  431 (465)
                      .-.|+.++||.-+++-+.+.....|.+-..++-.+  .+..+.+|.++++++|+.
T Consensus       354 l~~l~a~ldCr~~h~~Y~~a~~g~C~~gl~Gl~~~--~l~s~~~a~~~~~lv~~~  406 (418)
T cd07912         354 LHQLTALLDCRGLHKDYVEALRGLCYDGLEGLLYL--LLFSLLAALLFTILVCVD  406 (418)
T ss_pred             HHHHHhhcchHHHHHHHHHHHHccccchHHHHHHH--HHHHHHHHHHHHHHHHhc
Confidence            44889999999999999999999999977766544  788888889999999877

The protein product of the Drosophila tweety (tty) gene is thought to form a trans-membrane protein with five membrane-spanning regions and a cytoplasmic C-terminus. This N-terminal domain contains the putative transmembrane spanning regions. Tweety has been suggested as a candidate for a large conductance chloride channel, both in vertebrate and insect cells. Three human homologs have been identified and designated TTYH1-3. TTYH2 has been associated with the progression of cancer, and Drosophila melanogaster tweety has been assumed to play a role in development. TTYH2, and TTYH3 bind to and are ubiquinated by Nedd4-2, a HECT type E3 ubiquitin ligase, which most likely plays a role in controlling the cellular levels of tweety family proteins.

>PF04906 Tweety: Tweety; InterPro: IPR006990 None of the members of the tweety (tty) family have been functionally characterised

Probab=99.94  E-value=6.6e-26  Score=237.20  Aligned_cols=353  Identities=16%  Similarity=0.229  Sum_probs=220.8

Q ss_pred             CcCCccchhhhhhhhhhhHHHHHHHHHHHHHHHHHH---HHHhCCcccCCCCCCc---hhHHHHHHHHHHHHHHHHHHHH
Q 012361            2 YLIFSSLCMQSVGFTGASAFILAVIWFISFGLVLVA---HHCCGWRINIKGKESA---SSQRICLILLIVFTCAAAIGCI   75 (465)
Q Consensus         2 ~~i~~~hYwaSv~fTg~pgf~iA~~Wfi~fGl~l~~---~~cc~~~~~~~~~~S~---~~~~~slillilft~~ai~gc~   75 (465)
                      ++|.|+.|-+|++|.|    ++|++|++..-+++++   ++|||++.  ++++++   .+..+++++..+.+++||   +
T Consensus         8 F~p~~~~Y~qsL~~la----~v~~~~l~l~Ll~ll~yl~~~CC~r~~--~~~~~~~~~~c~~~~~~ia~lvc~aai---g   78 (406)
T PF04906_consen    8 FNPQDEEYQQSLLILA----SVAAACLALSLLFLLIYLICRCCCRRP--REEKSSRRCCCLTWSLVIATLVCCAAI---G   78 (406)
T ss_pred             CCCCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhhCCCC--CccccccCCcchHHHHHHHHHHHHHHH---H
Confidence            6899999999999999    8899998753333333   23333321  122232   366788877777776666   7


Q ss_pred             hhhcccchhhhhhhhhhhHHhccchHHHHHHHHHHHHHHhhhhhccc-------ccc-cCchhhhhHHHHHHHHHHHHHH
Q 012361           76 LLSVGQDEFHGEAMHTLKYVVNQSDYTVKTLRNVTEYLSLAKTINVA-------QVF-LPSAVMDDIDKLNRDLSTAANT  147 (465)
Q Consensus        76 vl~~Gq~kfh~~~~~t~~~Vv~qad~tv~~lrnvt~~L~~ak~~~v~-------~~~-lP~~~~~~id~l~~~Lns~A~~  147 (465)
                      ++++||++.|++..+.. +-.+.++.++..+++.++..+......+.       .++ .|.+..+.+.++++.+.+.+++
T Consensus        79 vG~yGN~e~~~gv~~~~-~s~~~~n~t~~~i~~~v~~~~~~l~~~v~~~l~~Le~~~~~~~~~~~~~~~~~~~~~~v~~~  157 (406)
T PF04906_consen   79 VGFYGNSETNDGVYQLI-YSLRNANHTLSGIDNLVSDTTEALNSTVEQHLTRLEEIFAKRTDLLQALQFLQQQAENVVQQ  157 (406)
T ss_pred             cccccchhhhccHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHH
Confidence            88999999999976643 34555666666666665544432222221       112 3445555555555544444444


Q ss_pred             HHHH-----hhhhHHHHHHHHHHH---HH-HHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 012361          148 LADK-----TSENSAKIRKVFNAV---RS-ALITVAALMLLLSIIGLFLSILRHKHAIHIFILSGWLLVAITFILCGVFV  218 (465)
Q Consensus       148 i~~k-----~~~n~~~I~~~l~~v---~~-~liiva~vml~l~~~glv~~~~~~~~~~~~~~~~gwilv~~twil~G~~l  218 (465)
                      +++-     ...+...+.+-.+.+   |. +.+.+..+++++++++++--..+.|+.++.+.++|++.++++|++.|+++
T Consensus       158 l~~l~~~~~~~~~l~~~~~~~~~~E~yRw~~~~~lL~l~l~icl~~l~glar~Sk~~li~~~v~gll~lvisW~~~g~~l  237 (406)
T PF04906_consen  158 LDELPFWRNVSLSLEQLAEQVSFYEYYRWLAYLGLLILDLVICLLGLLGLARQSKCLLIVFSVLGLLALVISWISLGLEL  237 (406)
T ss_pred             HhcCcccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceEEEeeeccHHHHHHHHHHHHHHH
Confidence            4222     111222333333322   32 23444455666666654443445788999999999999999999999999


Q ss_pred             HHHhhhhhhhHhhHhhhcCCCCCCcccccccCCcccchhhHHHHhHHHHHHHHHHHhHHHHHhhhcCCCCCcccccccCC
Q 012361          219 ILNNAISDTCMAMDEWVDHPHAETALSNILPCVDQRTTNKSLIQSKEVITDIVNVVNQFVYNIANANPSQDYIYYYNQTG  298 (465)
Q Consensus       219 ~l~~~~~DtC~Am~e~~~~p~~~T~L~~iLPCvd~~~a~~~L~~~ke~i~~lv~~vN~~i~~i~n~n~~~~~~~yynqsg  298 (465)
                      +..++++|+|+++++|+.+-+.+....|                                           .-.||..++
T Consensus       238 a~aV~~SDFC~~Pd~~i~~~~~~~~~~d-------------------------------------------i~~YYl~C~  274 (406)
T PF04906_consen  238 AAAVGLSDFCVDPDTYILNQTQNETSAD-------------------------------------------ILQYYLTCS  274 (406)
T ss_pred             HhccchhhhccCHHHHHHHhcccccchh-------------------------------------------HHHHhhcCC
Confidence            9999999999999999988765431111                                           114888888


Q ss_pred             CCCCCCCCCCCCCcccccCCCccccccchhhccccceeecCCCCCCCcccccCCCccchhhHHHHHHHHHHHHHHHhhhc
Q 012361          299 PVMPPLCYPYDSQLQDRQCGSYEVSIANASKVWQNYTCELSTSGSSAFGRCNSVGRVTPYFYKELVSAVTEIYALQLYTP  378 (465)
Q Consensus       299 p~~p~lCnPf~~~~~~~~C~~gev~i~na~~v~~~~~C~~~~~~~~~~~~C~t~gr~tp~~y~q~~a~~n~~~~L~~~~P  378 (465)
                      +..+   |||...++.-+     -.+.++...+....-...+       .+.+.+    +.-.++....|+....++   
T Consensus       275 ~~~~---nPFqq~l~~~~-----~al~~~q~~~~~L~~~a~~-------~fp~~~----~~l~~i~~~Ln~~e~~l~---  332 (406)
T PF04906_consen  275 QSVS---NPFQQRLTSSQ-----RALSNMQSQVQGLLREAVP-------LFPTAQ----EPLLAIQEDLNSTERSLH---  332 (406)
T ss_pred             CCCC---CchHHHHHHHH-----HHHHHHHHHHHHHHHHHHh-------hCCCcc----chHHHHHHHHHHHHHHHH---
Confidence            8755   79987654332     1334444444333211100       111111    224566666676555544   


Q ss_pred             ccccCCCChhHHHHHHhhhhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012361          379 RLLSLQDCNFVRDTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWIL  431 (465)
Q Consensus       379 ~l~~L~~C~fVr~~F~~I~~~~C~~L~~~~~~v~~gl~~lS~~~~l~~i~Wi~  431 (465)
                      .++.++||.-+++.|.+...+.|.+-..++-.++  +..+.+|.++++++|+.
T Consensus       333 ~l~alldCr~lh~dY~~al~g~C~dg~eGl~~l~--l~sll~al~f~~~v~~~  383 (406)
T PF04906_consen  333 QLTALLDCRGLHKDYVDALRGLCYDGLEGLLYLL--LFSLLAALLFSILVCVV  383 (406)
T ss_pred             HHHhhcccccHHHHHHHHHHhhccchHhHHHHHH--HHHHHHHHHHHHHHHHh
Confidence            8999999999999999999999999888886665  45555555566666554

However, they are considered to be transmembrane proteins with five potential membrane-spanning regions. A number of potential functions have been suggested on the basis of homology to the yeast FTR1 and FTH1 iron transporter proteins and the mammalian neurotensin receptors 1 and 2 in that they have a similar hydrophobicity profiles although there is no detectable sequence homology to the tweety-related proteins. It has been proposed that the tweety-related proteins could be involved in transport of iron or other divalent cations or alternatively that they may be membrane-bound receptors [].

>KOG4433 consensus Tweety transmembrane/cell surface protein [General function prediction only]

Probab=99.87  E-value=1.9e-20  Score=194.51  Aligned_cols=354  Identities=17%  Similarity=0.198  Sum_probs=215.6

Q ss_pred             CcCCccchhhhhhhhhhhHHHHHHHHHHHH--HHH-HHHHHHhCCcccCCCCC-CchhHHHHHHHHHHHHHHHHHHHHhh
Q 012361            2 YLIFSSLCMQSVGFTGASAFILAVIWFISF--GLV-LVAHHCCGWRINIKGKE-SASSQRICLILLIVFTCAAAIGCILL   77 (465)
Q Consensus         2 ~~i~~~hYwaSv~fTg~pgf~iA~~Wfi~f--Gl~-l~~~~cc~~~~~~~~~~-S~~~~~~slillilft~~ai~gc~vl   77 (465)
                      +++-++.|.+|.++.|    ++|++.+++-  ||+ -++|.|||++-..+++. +.++..+++++..+.++++|   ++.
T Consensus        32 F~pe~~~Y~QaL~lla----~l~aa~l~l~Ll~ll~yli~~cC~Rr~~~~~~~~~~~c~s~~l~I~tl~cca~i---gvg  104 (526)
T KOG4433|consen   32 FRPEDSEYQQALLLLA----ALAAACLGLSLLFLLFYLICRCCCRRETTGRKRRRVRCLSWSLIIATLMCCAAI---GVG  104 (526)
T ss_pred             CCCCcHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHcCCCccCCCCCCcceeeehHHHHHHHHHHHH---hee
Confidence            4677899999999999    7777766642  332 23356665543221222 34677788988888888887   888


Q ss_pred             hcccchhhhhhhhhhhHHhccchHHHHHHHHHHHHHHhhhhhcccccc-cCchhhhh---HHH----HHHHHHHHHHHHH
Q 012361           78 SVGQDEFHGEAMHTLKYVVNQSDYTVKTLRNVTEYLSLAKTINVAQVF-LPSAVMDD---IDK----LNRDLSTAANTLA  149 (465)
Q Consensus        78 ~~Gq~kfh~~~~~t~~~Vv~qad~tv~~lrnvt~~L~~ak~~~v~~~~-lP~~~~~~---id~----l~~~Lns~A~~i~  149 (465)
                      ++||+++|++.... -|-.+.++.++.++++.+..++++.+....+.. -|..++..   +++    +++++..++.+.+
T Consensus       105 ~ygN~e~~~G~~q~-~~Sl~~an~tv~ti~~qv~~~~~~l~~~~~~~l~~~~~n~t~~~~l~~~l~~vq~~~~~a~~~l~  183 (526)
T KOG4433|consen  105 FYGNSETSDGLLQA-TYSLRHANHTVSTIDAQVSDTAEGLNNTAEQLLETLEENLTARPELLQALRRVQGNAETAVGQLS  183 (526)
T ss_pred             eecCccccchHHHH-HHhhhhhcchhhHHHHHHHHHHHHHHHHHHHHhhhHHhhhhhHHHHHHHHHHHHHHHHHHHHhhh
Confidence            99999999997553 345677888888888887766665443222222 23333322   222    2223333333322


Q ss_pred             HHhhh-----hHHHHHHHHHHH---HH-HHHHHHHHHHHHHHHHHHHHhhc-hhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012361          150 DKTSE-----NSAKIRKVFNAV---RS-ALITVAALMLLLSIIGLFLSILR-HKHAIHIFILSGWLLVAITFILCGVFVI  219 (465)
Q Consensus       150 ~k~~~-----n~~~I~~~l~~v---~~-~liiva~vml~l~~~glv~~~~~-~~~~~~~~~~~gwilv~~twil~G~~l~  219 (465)
                      .-...     ...++++..+..   |. ++.+..++.|++++++ ++|+++ .||+++.|.++|.+.++++|.+.|++++
T Consensus       184 ~~~~~~~~~~sl~~l~~~~~~yE~~RW~~~v~lL~l~LvvC~v~-vlglak~Skc~li~fsv~Gll~lvisWl~~gl~la  262 (526)
T KOG4433|consen  184 GLPFWRMVAVSLEKLAEQVDFYESYRWLAYVLLLTLLLVVCLVL-VLGLAKRSKCLLIVFSVCGLLALVISWLSLGLELA  262 (526)
T ss_pred             cCcccccCcccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhcchhhhHHHHHHHHHHHHHHHHHhhhHH
Confidence            11111     122455544433   32 2334444444455433 444544 7999999999999999999999999999


Q ss_pred             HHhhhhhhhHhhHhhhcCCCCCCcccccccCCcccchhhHHHHhHHHHHHHHHHHhHHHHHhhhcCCCCCcccccccCCC
Q 012361          220 LNNAISDTCMAMDEWVDHPHAETALSNILPCVDQRTTNKSLIQSKEVITDIVNVVNQFVYNIANANPSQDYIYYYNQTGP  299 (465)
Q Consensus       220 l~~~~~DtC~Am~e~~~~p~~~T~L~~iLPCvd~~~a~~~L~~~ke~i~~lv~~vN~~i~~i~n~n~~~~~~~yynqsgp  299 (465)
                      ..++++|+|+.+|+|+.+-..+- +    |=                                      ....||-++.|
T Consensus       263 ~sVa~sDFC~~Pd~y~~~~~~~~-l----~t--------------------------------------~~~~~yl~c~~  299 (526)
T KOG4433|consen  263 SSVALSDFCVDPDDYVLNMVEEY-L----ST--------------------------------------DILLYYLACSP  299 (526)
T ss_pred             HHhhhhhhccChHHHHHHhhhcc-c----ch--------------------------------------hHHhhhcccCC
Confidence            99999999999999998765431 1    10                                      01235555544


Q ss_pred             CCCCCCCCCCCCcccccCCCccccccchhhccccceeecCCCCCCCcccccCCCccchhhHHHHHHHHHHHHHHHhhhcc
Q 012361          300 VMPPLCYPYDSQLQDRQCGSYEVSIANASKVWQNYTCELSTSGSSAFGRCNSVGRVTPYFYKELVSAVTEIYALQLYTPR  379 (465)
Q Consensus       300 ~~p~lCnPf~~~~~~~~C~~gev~i~na~~v~~~~~C~~~~~~~~~~~~C~t~gr~tp~~y~q~~a~~n~~~~L~~~~P~  379 (465)
                         .--|||.+.++..+=.-.  .+.+.-+-..+..=..            .+  -..+....+....|.+..+++   .
T Consensus       300 ---t~~NpF~qrL~~sq~al~--~~~~~va~l~r~~v~~------------f~--~~q~~L~Av~~dLn~te~nl~---q  357 (526)
T KOG4433|consen  300 ---THSNPFQQRLTESQRALN--NMQSQVAGLLRMAVPL------------FP--AAQDPLLAVQEDLNSTERNLH---Q  357 (526)
T ss_pred             ---CCCCchhHHHHHHHHHHH--HHHHHHHHHHHhhhhc------------cc--cccCcHHHHHHHHHHHHHHHH---H
Confidence               466888776543331111  1111111111111000            00  001114556667777666666   7


Q ss_pred             cccCCCChhHHHHHHhhhhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012361          380 LLSLQDCNFVRDTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWIL  431 (465)
Q Consensus       380 l~~L~~C~fVr~~F~~I~~~~C~~L~~~~~~v~~gl~~lS~~~~l~~i~Wi~  431 (465)
                      |..+.||.-+++-|.+...+.|.+--.++  +|..+..+-.|++|++++|..
T Consensus       358 LtAlvdCr~lH~dy~~AlrGlC~~gl~GL--~~lml~s~L~a~~lsilv~~~  407 (526)
T KOG4433|consen  358 LTALVDCRSLHKDYVAALRGLCYDGLEGL--LYLMLFSFLTALALSILVCSD  407 (526)
T ss_pred             HHHhhhhhHHHHHHHHHHHHhhhhhHHHH--HHHHHHHHHHHHHHHHHHhcc
Confidence            88999999999999999999998855544  344677777777777777443

>PF05478 Prominin: Prominin; InterPro: IPR008795 The prominins are an emerging family of proteins that, among the multispan membrane proteins, display a novel topology

Probab=98.46  E-value=0.00017  Score=82.46  Aligned_cols=95  Identities=18%  Similarity=0.234  Sum_probs=56.1

Q ss_pred             HHHHHHHHHHHHHHHHHH---HHHhCCcccC---CC----CCCchhHH-HHHHHHHHHHHHHHHHHHhhhcccchhhhhh
Q 012361           20 AFILAVIWFISFGLVLVA---HHCCGWRINI---KG----KESASSQR-ICLILLIVFTCAAAIGCILLSVGQDEFHGEA   88 (465)
Q Consensus        20 gf~iA~~Wfi~fGl~l~~---~~cc~~~~~~---~~----~~S~~~~~-~slillilft~~ai~gc~vl~~Gq~kfh~~~   88 (465)
                      ||++.++..++|.+++-+   |+||||||.+   +-    +++..|.+ ..-++|++++++-++|.+..|..|+.+|.+.
T Consensus        92 g~~v~~~i~ll~~il~P~vg~~fCcCRCc~~CGg~~~~~~~~~~~c~R~~l~~~L~~~~~~il~g~i~aF~~n~~l~~~v  171 (806)
T PF05478_consen   92 GFLVCAVIGLLFIILMPLVGLCFCCCRCCGNCGGRMHQRDKKNDACRRGCLGILLLLLTLIILFGVICAFVANQQLSTGV  171 (806)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhccccCCCcCCccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            455555444444444322   5666655532   11    11223433 3344456777777888888999999999998


Q ss_pred             hhhhhHHhccchHHHHHHHHHHHHHH
Q 012361           89 MHTLKYVVNQSDYTVKTLRNVTEYLS  114 (465)
Q Consensus        89 ~~t~~~Vv~qad~tv~~lrnvt~~L~  114 (465)
                      .++.+.+-+..+|+-.=++++.+.++
T Consensus       172 ~~~~~~~~~~~~Dl~~~l~~~~~qi~  197 (806)
T PF05478_consen  172 DDTPNTVNSTLDDLRTFLNDTPQQID  197 (806)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhHHHHH
Confidence            88877666666655555555554443

Mouse and Homo sapiens prominin and (Mus musculus) prominin-like 1 (PROML1) are predicted to contain five membrane spanning domains, with an N-terminal domain exposed to the extracellular space followed by four, alternating small cytoplasmic and large extracellular, loops and a cytoplasmic C-terminal domain []. The exact function of prominin is unknown although in humans defects in PROM1, the gene coding for prominin, cause retinal degeneration [].; GO: 0016021 integral to membrane

>cd07912 Tweety_N N-terminal domain of the protein encoded by the Drosophila tweety gene and related proteins, a family of chloride ion channels

Probab=96.81  E-value=0.06  Score=57.54  Aligned_cols=171  Identities=19%  Similarity=0.222  Sum_probs=82.4

Q ss_pred             HHHHHHHHHHhCCc----ccCCCCCCc-hhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhh---hhhhhhHHhccchHH
Q 012361           31 FGLVLVAHHCCGWR----INIKGKESA-SSQRICLILLIVFTCAAAIGCILLSVGQDEFHGE---AMHTLKYVVNQSDYT  102 (465)
Q Consensus        31 fGl~l~~~~cc~~~----~~~~~~~S~-~~~~~slillilft~~ai~gc~vl~~Gq~kfh~~---~~~t~~~Vv~qad~t  102 (465)
                      |.++.++++||||+    .++.+.... .+..+..++...-.+.+..|=.=...|-.+.-+.   +..++.-+-+|.+..
T Consensus        56 ~ll~~~~~~CCcr~~~~~~k~~s~~c~~~sLiiltL~~~aaIi~~f~GN~~~h~gV~~t~~si~~an~tv~~l~nqv~~l  135 (418)
T cd07912          56 FLLVYLITRCCDRKPTEERPRHSICCLKWSLVIATLLCCAAIGVGLYGNDETHDGVVQLTYSLRNANHTVAGIDNQTSDT  135 (418)
T ss_pred             HHHHHHHHhccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhhccHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45566667888777    456665533 3444333333333344565544443333333332   344444445555555


Q ss_pred             HHHHHHHH-HHHHhhhhh-cc----cccc-cCchhhhhHHHHHHHHHH---------HHHHHHHHhhhhHHHHHHHHHHH
Q 012361          103 VKTLRNVT-EYLSLAKTI-NV----AQVF-LPSAVMDDIDKLNRDLST---------AANTLADKTSENSAKIRKVFNAV  166 (465)
Q Consensus       103 v~~lrnvt-~~L~~ak~~-~v----~~~~-lP~~~~~~id~l~~~Lns---------~A~~i~~k~~~n~~~I~~~l~~v  166 (465)
                      .++++... +.|++.+.+ +.    .+.. .-.+.|++.+++.+++..         ..+.+.++++. .+.||-.   .
T Consensus       136 ~~al~~t~~~~L~~L~~il~~~~~~~~~~~~~~~~q~~~~n~~~~~~~~~~~~~~~~~l~~i~~~~~~-~E~~Rw~---~  211 (418)
T cd07912         136 EASLNVTVEPQLTNLEDIFDARVNKTDYLQIVQGLQQMATNAAQQLTGIPFWSLVGVSLTKLADQVSL-YESYRWL---A  211 (418)
T ss_pred             HHHHhhhhhhhHhHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHhccccccccCCCHHHHHHHHHH-HHHHHHH---H
Confidence            55442222 123322110 00    0000 112345555554443332         34555555555 6677763   5


Q ss_pred             HHHHHHHHHHHHHHHHHHH---------HHHhhchhhHHHHHHHHHHHHHHHH
Q 012361          167 RSALITVAALMLLLSIIGL---------FLSILRHKHAIHIFILSGWLLVAIT  210 (465)
Q Consensus       167 ~~~liiva~vml~l~~~gl---------v~~~~~~~~~~~~~~~~gwilv~~t  210 (465)
                      .+.+.++..+..+++++|+         +|+++|+     +.+++.|++..+-
T Consensus       212 ~l~lL~~~lviC~~~l~gl~r~Sr~~li~~s~~g~-----l~l~~~W~~~~~~  259 (418)
T cd07912         212 YLGLLSLLLVICLVLLVGLARHSRCLLIVFSVCGL-----FALIISWLSLGLY  259 (418)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHH-----HHHHHHHHHHHHH
Confidence            6666666676666667775         3444443     3345567776554

The protein product of the Drosophila tweety (tty) gene is thought to form a trans-membrane protein with five membrane-spanning regions and a cytoplasmic C-terminus. This N-terminal domain contains the putative transmembrane spanning regions. Tweety has been suggested as a candidate for a large conductance chloride channel, both in vertebrate and insect cells. Three human homologs have been identified and designated TTYH1-3. TTYH2 has been associated with the progression of cancer, and Drosophila melanogaster tweety has been assumed to play a role in development. TTYH2, and TTYH3 bind to and are ubiquinated by Nedd4-2, a HECT type E3 ubiquitin ligase, which most likely plays a role in controlling the cellular levels of tweety family proteins.

>KOG4331 consensus Polytopic membrane protein Prominin [General function prediction only]

Probab=96.59  E-value=0.0094  Score=67.31  Aligned_cols=70  Identities=7%  Similarity=0.072  Sum_probs=55.8

Q ss_pred             HHHHHHHHHHHHHHHhhh-cccccCCCChhHHHHHHhhhhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012361          360 YKELVSAVTEIYALQLYT-PRLLSLQDCNFVRDTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWIL  431 (465)
Q Consensus       360 y~q~~a~~n~~~~L~~~~-P~l~~L~~C~fVr~~F~~I~~~~C~~L~~~~~~v~~gl~~lS~~~~l~~i~Wi~  431 (465)
                      ..++..+  .+|-+.+|- |..|++.+|+-+.....+-+.-.|.=..+-+..-|.+++...+-+..++++-.-
T Consensus       741 ~~~~~~~--~~~YI~wv~~e~~e~V~sCqPls~~l~~~~~~lC~~~iDPlN~fW~~il~c~~lliP~li~a~~  811 (865)
T KOG4331|consen  741 LRRIKGY--ISQYILWVQKEHLENVASCQPLSKILRENVVVLCGYIIDPLNLFWFCILFCTVLLIPSLIFAVK  811 (865)
T ss_pred             HHHHHhh--HHHHHHHHHHHHHhhccccccHHHHHHhhhHhhhhhccCCccccchHHHHHHHHHHhHHHHHHH
Confidence            3455553  333344443 888999999999999998888899999999999999999999999998888655

>PF04906 Tweety: Tweety; InterPro: IPR006990 None of the members of the tweety (tty) family have been functionally characterised

Probab=95.18  E-value=4.4  Score=43.31  Aligned_cols=110  Identities=16%  Similarity=0.274  Sum_probs=51.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 012361          156 SAKIRKVFNAVRSALITVAALMLLLSIIGLF---------LSILRHKHAIHIFILSGWLLVAITFILCGVFVILNNAISD  226 (465)
Q Consensus       156 ~~~I~~~l~~v~~~liiva~vml~l~~~glv---------~~~~~~~~~~~~~~~~gwilv~~twil~G~~l~l~~~~~D  226 (465)
                      .+.+|-.   ..+.+.++..+.+++.++|+.         +.++|     .+.+++.|++..+-.-.   -..++=+=.|
T Consensus       181 ~E~yRw~---~~~~lL~l~l~icl~~l~glar~Sk~~li~~~v~g-----ll~lvisW~~~g~~la~---aV~~SDFC~~  249 (406)
T PF04906_consen  181 YEYYRWL---AYLGLLILDLVICLLGLLGLARQSKCLLIVFSVLG-----LLALVISWISLGLELAA---AVGLSDFCVD  249 (406)
T ss_pred             HHHHHHH---HHHHHHHHHHHHHHHHHHHHHhcCcceEEEeeecc-----HHHHHHHHHHHHHHHHh---ccchhhhccC
Confidence            5566664   556666667767777777763         23444     23444578876554211   1122211111


Q ss_pred             hhHhhHhhhcCCCCCCcccccccCCcccc--hhhHHHHhHHHHHHHHHHHhH
Q 012361          227 TCMAMDEWVDHPHAETALSNILPCVDQRT--TNKSLIQSKEVITDIVNVVNQ  276 (465)
Q Consensus       227 tC~Am~e~~~~p~~~T~L~~iLPCvd~~~--a~~~L~~~ke~i~~lv~~vN~  276 (465)
                      -=.-..+..+++....-+.-.+-|....+  -++.+..+...+.++-+++..
T Consensus       250 Pd~~i~~~~~~~~~~di~~YYl~C~~~~~nPFqq~l~~~~~al~~~q~~~~~  301 (406)
T PF04906_consen  250 PDTYILNQTQNETSADILQYYLTCSQSVSNPFQQRLTSSQRALSNMQSQVQG  301 (406)
T ss_pred             HHHHHHHhcccccchhHHHHhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence            11112223333332112567777765432  123455555555555444443

However, they are considered to be transmembrane proteins with five potential membrane-spanning regions. A number of potential functions have been suggested on the basis of homology to the yeast FTR1 and FTH1 iron transporter proteins and the mammalian neurotensin receptors 1 and 2 in that they have a similar hydrophobicity profiles although there is no detectable sequence homology to the tweety-related proteins. It has been proposed that the tweety-related proteins could be involved in transport of iron or other divalent cations or alternatively that they may be membrane-bound receptors [].

>PF05478 Prominin: Prominin; InterPro: IPR008795 The prominins are an emerging family of proteins that, among the multispan membrane proteins, display a novel topology

Probab=93.63  E-value=1.8  Score=50.03  Aligned_cols=53  Identities=9%  Similarity=0.197  Sum_probs=47.0

Q ss_pred             ccccCCCChhHHHHHHhhhhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012361          379 RLLSLQDCNFVRDTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWIL  431 (465)
Q Consensus       379 ~l~~L~~C~fVr~~F~~I~~~~C~~L~~~~~~v~~gl~~lS~~~~l~~i~Wi~  431 (465)
                      .-++...|.-+.+++...+.--|.-+...+.-.|.|+..-+.-+++++++-+-
T Consensus       738 ~~~~vg~C~Pl~~~~d~~~~~~C~~ivdp~N~fWf~l~~c~~~liP~ii~avk  790 (806)
T PF05478_consen  738 ITNDVGRCQPLANIYDSAVVILCSRIVDPINGFWFGLGWCTLFLIPSIIFAVK  790 (806)
T ss_pred             HHccCcCCccHHHHHHhHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34578899999999999999999999999999999999988888888877554

Mouse and Homo sapiens prominin and (Mus musculus) prominin-like 1 (PROML1) are predicted to contain five membrane spanning domains, with an N-terminal domain exposed to the extracellular space followed by four, alternating small cytoplasmic and large extracellular, loops and a cytoplasmic C-terminal domain []. The exact function of prominin is unknown although in humans defects in PROM1, the gene coding for prominin, cause retinal degeneration [].; GO: 0016021 integral to membrane

>KOG4433 consensus Tweety transmembrane/cell surface protein [General function prediction only]

Probab=87.00  E-value=21  Score=39.00  Aligned_cols=113  Identities=19%  Similarity=0.205  Sum_probs=55.5

Q ss_pred             HHHHHHH--HHHhCCcccCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcccchhhhhhhhhhhHHhccchHHHHHHHH
Q 012361           31 FGLVLVA--HHCCGWRINIKGKESASSQRICLILLIVFTCAAAIGCILLSVGQDEFHGEAMHTLKYVVNQSDYTVKTLRN  108 (465)
Q Consensus        31 fGl~l~~--~~cc~~~~~~~~~~S~~~~~~slillilft~~ai~gc~vl~~Gq~kfh~~~~~t~~~Vv~qad~tv~~lrn  108 (465)
                      .|+.|+.  .+..|+||+|++..-++.+...-+--. +.|+.+++|+.+-.|  -+.++             ++-+-+..
T Consensus        54 l~l~Ll~ll~yli~~cC~Rr~~~~~~~~~~~c~s~~-l~I~tl~cca~igvg--~ygN~-------------e~~~G~~q  117 (526)
T KOG4433|consen   54 LGLSLLFLLFYLICRCCCRRETTGRKRRRVRCLSWS-LIIATLMCCAAIGVG--FYGNS-------------ETSDGLLQ  117 (526)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCccCCCCCCcceeeeh-HHHHHHHHHHHHhee--eecCc-------------cccchHHH
Confidence            3444443  344456666555444444443322212 224445666665432  22222             23333334


Q ss_pred             HHHHHHhhhhhcccccccCchhhhhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 012361          109 VTEYLSLAKTINVAQVFLPSAVMDDIDKLNRDLSTAANTLADKTSENSAKIRKVFNAV  166 (465)
Q Consensus       109 vt~~L~~ak~~~v~~~~lP~~~~~~id~l~~~Lns~A~~i~~k~~~n~~~I~~~l~~v  166 (465)
                      .+.++..|+.. +      .-++.++.+++++|+..+.+..+|-.+|..-..+.+..+
T Consensus       118 ~~~Sl~~an~t-v------~ti~~qv~~~~~~l~~~~~~~l~~~~~n~t~~~~l~~~l  168 (526)
T KOG4433|consen  118 ATYSLRHANHT-V------STIDAQVSDTAEGLNNTAEQLLETLEENLTARPELLQAL  168 (526)
T ss_pred             HHHhhhhhcch-h------hHHHHHHHHHHHHHHHHHHHHhhhHHhhhhhHHHHHHHH
Confidence            44455544421 1      134556677777887777777777777665444443333

>PF00957 Synaptobrevin: Synaptobrevin; InterPro: IPR001388 Synaptobrevin is an intrinsic membrane protein of small synaptic vesicles [], specialised secretory organelles of neurons that actively accumulate neurotransmitters and participate in their calcium-dependent release by exocytosis

Probab=86.79  E-value=6.4  Score=32.64  Aligned_cols=24  Identities=17%  Similarity=0.394  Sum_probs=12.4

Q ss_pred             hhhHHHHH---HHHHHHHHHHHHHhhh
Q 012361          131 MDDIDKLN---RDLSTAANTLADKTSE  154 (465)
Q Consensus       131 ~~~id~l~---~~Lns~A~~i~~k~~~  154 (465)
                      .+.++.++   ++|...|..+..++.+
T Consensus        30 ge~L~~L~~kt~~L~~~a~~F~k~a~~   56 (89)
T PF00957_consen   30 GEKLEELEDKTEELSDNAKQFKKNAKK   56 (89)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHhHHHHHHHHH
Confidence            34444444   5666666665544433

Vesicle function is mediated by proteins in their membranes, although the precise nature of the protein-protein interactions underlying this are still uncertain []. Synaptobrevin may play a role in the molecular events underlying neurotransmitter release and vesicle recycling and may be involved in the regulation of membrane flow in the nerve terminal, a process mediated by interaction with low molecular weight GTP-binding proteins []. Synaptic vesicle-associated membrane proteins (VAMPs) from Torpedo californica (Pacific electric ray) and SNC1 from yeast are related to synaptobrevin.; GO: 0016192 vesicle-mediated transport, 0016021 integral to membrane; PDB: 3EGX_C 2NUP_C 3EGD_C 2NUT_C 1IOU_A 1H8M_A 3B5N_A 3ZYM_A 2NPS_A 1SFC_E ....

>PF03904 DUF334: Domain of unknown function (DUF334); InterPro: IPR005602 This is a family of proteins found in Staphylococcus aureus plasmid with no characterised function

Probab=83.55  E-value=34  Score=33.99  Aligned_cols=22  Identities=18%  Similarity=0.312  Sum_probs=12.8

Q ss_pred             HhccchHHHHHHHHHHHHHHhh
Q 012361           95 VVNQSDYTVKTLRNVTEYLSLA  116 (465)
Q Consensus        95 Vv~qad~tv~~lrnvt~~L~~a  116 (465)
                      +-++-|.--...++++..|+.|
T Consensus        62 i~~~qd~reK~~~~I~ssL~eT   83 (230)
T PF03904_consen   62 IEEKQDIREKNLKEIKSSLEET   83 (230)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Confidence            4455555556666666666653

>KOG2348 consensus Urea transporter [Amino acid transport and metabolism]

Probab=80.55  E-value=1.9  Score=46.77  Aligned_cols=72  Identities=18%  Similarity=0.407  Sum_probs=40.6

Q ss_pred             HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012361          143 TAANTLADKTSENSAKIRKVFNAVRSALITVAALMLLLSIIGL-FLSILRHKHAIHIFILSGWLLVAITFILCGVFVIL  220 (465)
Q Consensus       143 s~A~~i~~k~~~n~~~I~~~l~~v~~~liiva~vml~l~~~gl-v~~~~~~~~~~~~~~~~gwilv~~twil~G~~l~l  220 (465)
                      ++++|+.++-.+ .++.++.+..     .+..++.+.++|+.+ -+-.+|.+-...-..|.||+.+++.|++++.|.+.
T Consensus       535 a~~~E~~d~e~e-k~kl~Ra~~i-----~~~~~li~t~~~viiwP~pmygskyIFSk~fF~gWviV~iiW~~~~a~~i~  607 (667)
T KOG2348|consen  535 AEAEEIVDAEQE-KKKLNRALRI-----GIFVSLIITFAFVIIWPLPMYGSKYIFSKLFFTGWVIVIIIWTFIAAFAIT  607 (667)
T ss_pred             cccchhcchhHH-HHHHhhhhhH-----HHHHHHHHHHHHHhhccccccCccceeechhhhHHHHHHHHHHHHHHHheE
Confidence            344454444433 3366665544     333444443433321 22234444445555677999999999999987654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	465
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.9 bits (100), Expect = 2e-04
 Identities = 46/334 (13%), Positives = 93/334 (27%), Gaps = 117/334 (35%)

Query: 219 ILNNAISDTCMAMDEWVDHPHAETALSNILPCVDQRTTNKSLIQSKEVITDIVNVVNQFV 278
           +  + +S     +D  +    A +    +   +        L + +E++   V  V +  
Sbjct: 41  MPKSILSKE--EIDHIIMSKDAVSGTLRLFWTL--------LSKQEEMVQKFVEEVLRIN 90

Query: 279 YN-IANA------NPSQD---YIYYYNQ---TGPVMPPLCY------PYDS------QLQ 313
           Y  + +        PS     YI   ++      V     Y      PY        +L+
Sbjct: 91  YKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAK--YNVSRLQPYLKLRQALLELR 148

Query: 314 DRQ---------CG----------SYEVSIANASKV-WQNYTCELSTSGSSAFGRCNSVG 353
             +          G          SY+V      K+ W N               CNS  
Sbjct: 149 PAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLN------------LKNCNSPE 196

Query: 354 RV------------------------TPYFYKELVSAVTEIYALQLYTPRLLSLQDCNFV 389
            V                               + + +  +   + Y   LL L +   V
Sbjct: 197 TVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN---V 253

Query: 390 RD-----TF------------QNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWILY 432
           ++      F            + +T         ++ + +  + +    V   LL ++  
Sbjct: 254 QNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYL-- 311

Query: 433 ANRPQ--REEVFVNLPLPIKCISRSQKNSVNSSN 464
             RPQ    EV    P  +  I+ S ++ + + +
Sbjct: 312 DCRPQDLPREVLTTNPRRLSIIAESIRDGLATWD 345

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.4 bits (96), Expect = 7e-04
 Identities = 48/365 (13%), Positives = 109/365 (29%), Gaps = 98/365 (26%)

Query: 93  KYVVNQSDYTVKTL-----RNVTEYLSLAKTINVAQVFLPSAVM-DDIDKLNRDLSTAAN 146
               N  + + K L     + VT++LS A T +++       +  D++  L   L    +
Sbjct: 256 AKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL---LLKYLD 312

Query: 147 TLADKTSENSAKIRKVFNAVRSALITVAALML----------------LLSIIGLFLSIL 190
                            N  R ++I  A  +                 L +II   L++L
Sbjct: 313 CRPQDLPREVLTT----NPRRLSII--AESIRDGLATWDNWKHVNCDKLTTIIESSLNVL 366

Query: 191 ------RHKHAIHIFILSGWLLVAITFILCGVFVIL-NNAISDTCMA-MDEWVD------ 236
                 +    + +F  S      I      +  ++  + I    M  +++         
Sbjct: 367 EPAEYRKMFDRLSVFPPS----AHIPT---ILLSLIWFDVIKSDVMVVVNKLHKYSLVEK 419

Query: 237 HPHAET------ALSNILPCVDQRTTNKSLIQSKEVITDIVNVVNQFVYNIANANPSQDY 290
            P   T       L   +   ++   ++S++          N+   F  +         Y
Sbjct: 420 QPKESTISIPSIYLELKVKLENEYALHRSIVDH-------YNIPKTFDSDDLIPPYLDQY 472

Query: 291 IYYYNQTGPVMPPLCYPYDSQLQDRQCGSYEVSIANASKVWQNYT------CELSTSGSS 344
            Y +         + +     L  +     E  +     V+ ++          ST+ ++
Sbjct: 473 FYSH---------IGH----HL--KNIEHPE-RMTLFRMVFLDFRFLEQKIRHDSTAWNA 516

Query: 345 AFGRCNSVGRVTPY---------FYKELVSAVTEIYALQLYTPRLLSLQDCNFVRDTFQN 395
           +    N++ ++  Y          Y+ LV+A+ +   L      L+  +  + +R     
Sbjct: 517 SGSILNTLQQLKFYKPYICDNDPKYERLVNAILDF--LPKIEENLICSKYTDLLRIALMA 574

Query: 396 ITSNY 400
                
Sbjct: 575 EDEAI 579

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.0 bits (95), Expect = 8e-04
 Identities = 60/458 (13%), Positives = 112/458 (24%), Gaps = 169/458 (36%)

Query: 92  LKYVVNQSDYTVKTLRNVTEYLSLAKTINVAQVFLPSAVMDDIDKLNRDLSTAANTLADK 151
           + +++   D    TLR       L+K   + Q F+   +  +   L   + T     +  
Sbjct: 51  IDHIIMSKDAVSGTLRLFW--TLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMM 108

Query: 152 TSENSAKIRKVFNAV---------RSALITV--AALMLLLSIIGLFL--------SIL-- 190
           T     +  +++N           R         AL+ L     + +        + +  
Sbjct: 109 TRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVAL 168

Query: 191 --------RHKHAIHIFILSGWLLVAITFILC----GVFVILNNAISDTCMAMDEWVDHP 238
                   + K    IF    W    +    C     V  +L          +D      
Sbjct: 169 DVCLSYKVQCKMDFKIF----W----LNLKNCNSPETVLEMLQK----LLYQIDP-NWTS 215

Query: 239 HAETALSNILPCVDQRTTNKSLIQSKE-----VITDIV---NVVNQFVYNIANANPSQDY 290
            ++ + +  L     +   + L++SK      ++   V      N F             
Sbjct: 216 RSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAF------------- 262

Query: 291 IYYYNQTGPVMPPLCYPYDSQLQDRQCGSYEVSIANASKVWQNYTCELSTSGSSAFGRCN 350
                                  +  C           K+       L T+         
Sbjct: 263 -----------------------NLSC-----------KI-------LLTTRFKQVTDFL 281

Query: 351 SVGRVTPYFYKELVSAVTEIYALQLY------------------TPRLLSL-----QDCN 387
           S    T          +T      L                    PR LS+     +D  
Sbjct: 282 SAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGL 341

Query: 388 FVRDTFQNITS-----------NYCPPLE---HY--LKI----VNAGLGMISFGVLLCLL 427
              D ++++             N   P E    +  L +     +     I   +L   L
Sbjct: 342 ATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAH-----IPTILL--SL 394

Query: 428 LWILYANRPQREEVFVNLPLPIKCISRS--QKNSVNSS 463
           +W  +        V VN     K    S  +K    S+
Sbjct: 395 IW--FDVIKSDVMVVVN-----KLHKYSLVEKQPKEST 425

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00