Citrus Sinensis ID: 012561

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-
MASNNQNKPPVLSNNITKASPSSNKKKLGVDEVTCDKEQKFGAEKMVGTANNARIRQAFSVVNGIQDLGLSSNPASNAGSECGTIEFTREDVEALLSEKMRYKNKFNYKERCENMMDYIKRLRLCIKWFQELEGDYAFEHERLRNALELSEQKCAEMELALRNKEEELNLIIVELRKSFASLQEKLAKEESDKLAALDSLAREKETRLNMERSHASLSEDLGKAQEELQSANQRIASINDMYKLLQEYNSSLQHYNTKLQKDIDAAHESIKRGEKEKSAIVENLSTLRGQYISLQEQLSTYKASQDEAMRQKDALVHEVASMRVELQQVRDDRDHQLSQVQALTAEVIKHKELAVSSEDLEARCASQSNQIRSLSDQLAAAEEKLEVSDLSALETKTEFEGQKKLINELRNHLEDAEYKLIEGEKLRKRLHNTILELEVNLSSSALFRRGLKDIDVCEYIS
ccccccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHcccccccccccccccc
************************************************************************************IEFTREDVEALLSEKMRYKNKFNYKERCENMMDYIKRLRLCIKWFQELEGDYAFEHERLRNALELSEQKCAEMELALRNKEEELNLIIVELRKSF**********************************************************INDMYKLLQEYNSSLQHY******************************TLRGQYIS***************************************************************************************************************LINELRNHLEDAEYKLIEGEKLRKRLHNTILELEVNLSSSALFRRGLKDIDVCEYI*
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MASNNQNKPPVLSNNITKASPSSNKKKLGVDEVTCDKEQKFGAEKMVGTANNARIRQAFSVVNGIQDLGLSSNPASNAGSECGTxxxxxxxxxxxxxxxxxxxxxFNYKERCENMMDYIKRLRLCIKWFQELEGDYAFExxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxKLAALDSLAREKETRLNMERSxxxxxxxxxxxxxxxxxxxxxxxxxxxxYKLLQEYNSSLQHYxxxxxxxxxxxxxxxxxxxxxKSAIVENLSTLRGQYISLQEQLSTYKASQDEAMRQKDALVHEVASMRVExxxxxxxxxxxxxxxxxxxxxVIKHKELAVSxxxxxxxxxxxxxxxxxxxxxxxxxxxxLEVSDLSALETKTExxxxxxxxxxxxxxxxxxxxxxxxxxxxRKRLHNTILELEVNLSSSALFRRGLKDIDVCEYIS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1I84, chain S
Confidence level:very confident
Coverage over the Query: 163-224
View the alignment between query and template
View the model in PyMOL
Template: 1I84, chain S
Confidence level:very confident
Coverage over the Query: 409-442
View the alignment between query and template
View the model in PyMOL
Template: 3U06, chain A
Confidence level:confident
Coverage over the Query: 372-385,400-453
View the alignment between query and template
View the model in PyMOL
Template: 4GKW, chain A
Confidence level:confident
Coverage over the Query: 216-333
View the alignment between query and template
View the model in PyMOL
Template: 3NA7, chain A
Confidence level:probable
Coverage over the Query: 269-447
View the alignment between query and template
View the model in PyMOL
Template: 2V71, chain A
Confidence level:probable
Coverage over the Query: 126-190,208-265
View the alignment between query and template
View the model in PyMOL

Templates for Structure Prediction

ID ?Alignment Graph ?Confidence Level ? View Alignment and Template ?
Query
1g8x, chain Aprobable Alignment | Template Structure