Citrus Sinensis ID: 012658
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 459 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SU63 | 538 | Aldehyde dehydrogenase fa | yes | no | 0.949 | 0.810 | 0.726 | 0.0 | |
| Q8S528 | 534 | Aldehyde dehydrogenase fa | no | no | 0.880 | 0.756 | 0.782 | 0.0 | |
| Q66HF8 | 519 | Aldehyde dehydrogenase X, | yes | no | 0.877 | 0.776 | 0.582 | 1e-135 | |
| Q5R6B5 | 517 | Aldehyde dehydrogenase X, | yes | no | 0.877 | 0.779 | 0.575 | 1e-134 | |
| Q9CZS1 | 519 | Aldehyde dehydrogenase X, | yes | no | 0.877 | 0.776 | 0.575 | 1e-134 | |
| P20000 | 520 | Aldehyde dehydrogenase, m | yes | no | 0.877 | 0.775 | 0.580 | 1e-133 | |
| Q2XQV4 | 521 | Aldehyde dehydrogenase, m | yes | no | 0.836 | 0.737 | 0.6 | 1e-133 | |
| P30837 | 517 | Aldehyde dehydrogenase X, | yes | no | 0.877 | 0.779 | 0.570 | 1e-133 | |
| Q5RF00 | 517 | Aldehyde dehydrogenase, m | no | no | 0.906 | 0.804 | 0.563 | 1e-131 | |
| P05091 | 517 | Aldehyde dehydrogenase, m | no | no | 0.906 | 0.804 | 0.563 | 1e-131 |
| >sp|Q9SU63|AL2B4_ARATH Aldehyde dehydrogenase family 2 member B4, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B4 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/446 (72%), Positives = 378/446 (84%), Gaps = 10/446 (2%)
Query: 1 MAARRIPLLLSRSFTSSSPTLF-SRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITP 59
MAARR+ LLSRSF++SSP LF S+GR+ C +++AAAE+ I P
Sbjct: 1 MAARRVSSLLSRSFSASSPLLFRSQGRN---CYNGGI------LRRFGTSSAAAEEIINP 51
Query: 60 PVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG 119
V+V +TQLLING FVDSASGKTFPTLDPRTG+VI HVAEG+AED+NRAV AAR AFDEG
Sbjct: 52 SVQVSHTQLLINGNFVDSASGKTFPTLDPRTGEVIAHVAEGDAEDINRAVKAARTAFDEG 111
Query: 120 PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179
PWP+M+AYERS+++LRFADL+E+H++E+A+LETWDNGKP++QS E+PM RLFRYYAG
Sbjct: 112 PWPKMSAYERSRVLLRFADLVEKHSEELASLETWDNGKPYQQSLTAEIPMFARLFRYYAG 171
Query: 180 WADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239
WADKI GLT PADG Y V TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA
Sbjct: 172 WADKIHGLTIPADGNYQVHTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 231
Query: 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299
EQTPL+A Y KL EAGLPPGVLNIVSG+G TAGAALASHM+VDKLAFTGST TGK++L
Sbjct: 232 EQTPLTAFYAGKLFLEAGLPPGVLNIVSGFGATAGAALASHMDVDKLAFTGSTDTGKVIL 291
Query: 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
LAA SNLKPVTLELGGKSPFIV EDAD+DKA ELAH+ALFFNQGQCCCAGSRTFVHE V
Sbjct: 292 GLAANSNLKPVTLELGGKSPFIVFEDADIDKAVELAHFALFFNQGQCCCAGSRTFVHEKV 351
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 419
YD+FVEK+ A A+KRVVGDPF+ GI+QGPQID +QFEK++KYI+SG++ A LE GG+++
Sbjct: 352 YDEFVEKSKARALKRVVGDPFRKGIEQGPQIDLKQFEKVMKYIKSGIESNATLECGGDQI 411
Query: 420 GAKGYYIKPTVFTGVKVLILISPASI 445
G KGY+I+PTVF+ VK +LI+ I
Sbjct: 412 GDKGYFIQPTVFSNVKDDMLIAQDEI 437
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Possesses activity on acetaldehyde and glycolaldehyde in vitro. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 3 |
| >sp|Q8S528|AL2B7_ARATH Aldehyde dehydrogenase family 2 member B7, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B7 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/404 (78%), Positives = 360/404 (89%)
Query: 42 GYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGE 101
G S+ AAA E+ ITPPVKV++TQLLI G+FVD+ SGKTFPTLDPR G+VI V+EG+
Sbjct: 30 GAQRYSNLAAAVENTITPPVKVEHTQLLIGGRFVDAVSGKTFPTLDPRNGEVIAQVSEGD 89
Query: 102 AEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQ 161
AEDVNRAV+AARKAFDEGPWP+MTAYERSKI+ RFADL+E+HNDEIAALETWDNGKP+EQ
Sbjct: 90 AEDVNRAVAAARKAFDEGPWPKMTAYERSKILFRFADLIEKHNDEIAALETWDNGKPYEQ 149
Query: 162 SAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221
SAQ EVPM R+FRYYAGWADKI G+T P DGP+HVQTLHEPIGVAGQIIPWNFPLLM +
Sbjct: 150 SAQIEVPMLARVFRYYAGWADKIHGMTMPGDGPHHVQTLHEPIGVAGQIIPWNFPLLMLS 209
Query: 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHM 281
WK+GPALACGNT+VLKTAEQTPLSAL V KLLHEAGLP GV+NIVSG+G TAGAA+ASHM
Sbjct: 210 WKLGPALACGNTVVLKTAEQTPLSALLVGKLLHEAGLPDGVVNIVSGFGATAGAAIASHM 269
Query: 282 EVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 341
+VDK+AFTGST GKI+L+LA+KSNLK VTLELGGKSPFIVCEDADVD+A ELAH+ALFF
Sbjct: 270 DVDKVAFTGSTDVGKIILELASKSNLKAVTLELGGKSPFIVCEDADVDQAVELAHFALFF 329
Query: 342 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 401
NQGQCCCAGSRTFVHE VYD+FVEKA A A+KR VGDPFK GI+QGPQ+DSEQF KILKY
Sbjct: 330 NQGQCCCAGSRTFVHERVYDEFVEKAKARALKRNVGDPFKSGIEQGPQVDSEQFNKILKY 389
Query: 402 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASI 445
I+ GV+ GA L+ GG+RLG+KGYYI+PTVF+ VK +LI+ I
Sbjct: 390 IKHGVEAGATLQAGGDRLGSKGYYIQPTVFSDVKDDMLIATDEI 433
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Possesses activity on acetaldehyde and glycolaldehyde in vitro. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q66HF8|AL1B1_RAT Aldehyde dehydrogenase X, mitochondrial OS=Rattus norvegicus GN=Aldh1b1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 481 bits (1237), Expect = e-135, Method: Compositional matrix adjust.
Identities = 236/405 (58%), Positives = 296/405 (73%), Gaps = 2/405 (0%)
Query: 42 GYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGE 101
G +T+ S AAA +PI P ++ Y QL IN ++ D+ S KTFPT++P TG+VI HVAEG+
Sbjct: 16 GRTTSYSTAAALPNPIPNP-EIRYNQLFINNEWHDAVSKKTFPTVNPTTGEVIGHVAEGD 74
Query: 102 AEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE 160
DV+ AV AAR+AF G PW RM A ER +++ R ADL+ER +A+LET DNGKPF+
Sbjct: 75 RADVDLAVRAAREAFRLGSPWRRMDASERGRLLNRLADLVERDRVYLASLETLDNGKPFQ 134
Query: 161 QSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220
+S ++ +++RY AGWADK G T P DG + T HEP+GV GQIIPWNFPL+M
Sbjct: 135 ESYVLDLDEVIKVYRYLAGWADKWHGKTIPMDGEHFCFTRHEPVGVCGQIIPWNFPLVMQ 194
Query: 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 280
WK+ PALA GNT+V+K AEQTPLSALY++ L+ EAG PPGV+NI++GYGPTAGAA+A H
Sbjct: 195 GWKLAPALATGNTVVMKVAEQTPLSALYLASLIKEAGFPPGVVNIITGYGPTAGAAIAQH 254
Query: 281 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 340
M+VDK+AFTGST G ++ + A SNLK VTLELGGKSP IV DAD+D A + H ALF
Sbjct: 255 MDVDKVAFTGSTEVGHLIQKAAGDSNLKRVTLELGGKSPSIVLADADMDHAVDQCHEALF 314
Query: 341 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 400
FN GQCCCAGSRTFV ES+Y +F+E+ A KR VG+PF+ QQGPQ+D EQFEKIL
Sbjct: 315 FNMGQCCCAGSRTFVEESIYHEFLERTVEKAKKRKVGNPFELDTQQGPQVDKEQFEKILG 374
Query: 401 YIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASI 445
YIR G GAKL GGER G +G++IKPTVF V+ + I+ I
Sbjct: 375 YIRLGQKEGAKLLCGGERFGERGFFIKPTVFGNVQDDMRIAREEI 419
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ALDHs play a major role in the detoxification of alcohol-derived acetaldehyde. They are involved in the metabolism of corticosteroids, biogenic amines, neurotransmitters, and lipid peroxidation. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q5R6B5|AL1B1_PONAB Aldehyde dehydrogenase X, mitochondrial OS=Pongo abelii GN=ALDH1B1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 478 bits (1229), Expect = e-134, Method: Compositional matrix adjust.
Identities = 233/405 (57%), Positives = 296/405 (73%), Gaps = 2/405 (0%)
Query: 42 GYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGE 101
G + S+AAA PI P + Y QL IN ++ D+ S KTFPT++P TG+VI HVAEG+
Sbjct: 14 GRTARYSSAAALPSPILNP-DIPYNQLFINNEWQDAVSKKTFPTVNPTTGEVIGHVAEGD 72
Query: 102 AEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE 160
DV+RAV AAR+AF G PW RM A ER +++ ADL+ER +A+LET DNGKPF+
Sbjct: 73 RADVDRAVKAAREAFRLGSPWRRMDASERGRLLNCLADLVERDRVYLASLETLDNGKPFQ 132
Query: 161 QSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220
+S ++ +++RY+AGWADK G T P DG + T HEPIGV GQIIPWNFPL+M
Sbjct: 133 ESYALDLDEVIKVYRYFAGWADKWHGKTIPMDGQHFCFTRHEPIGVCGQIIPWNFPLVMQ 192
Query: 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 280
WK+ PALA GNT+V+K AEQTPLSALY++ L+ EAG PPGV+NI++GYGPTAGAA+A H
Sbjct: 193 GWKLAPALATGNTVVMKVAEQTPLSALYLASLIKEAGFPPGVVNIITGYGPTAGAAIAQH 252
Query: 281 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 340
M+VDK+AFTGST G ++ + A SNLK VTLELGGKSP IV DAD++ A E H ALF
Sbjct: 253 MDVDKVAFTGSTEVGHLIQKAAGDSNLKRVTLELGGKSPSIVLADADMEHAVEQCHEALF 312
Query: 341 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 400
FN GQCCCAGSRTFV ES+Y++F+E+ A +R VG+PF+ QQGPQ+D EQFE++L
Sbjct: 313 FNMGQCCCAGSRTFVEESIYNEFLERTVEKAKQRKVGNPFELDTQQGPQVDKEQFERVLG 372
Query: 401 YIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASI 445
YI+ G GAKL GGER G +G++IKPTVF GV+ + I+ I
Sbjct: 373 YIQLGQKEGAKLLCGGERFGERGFFIKPTVFGGVQDDMRIAKEEI 417
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ALDHs play a major role in the detoxification of alcohol-derived acetaldehyde. They are involved in the metabolism of corticosteroids, biogenic amines, neurotransmitters, and lipid peroxidation. Pongo abelii (taxid: 9601) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q9CZS1|AL1B1_MOUSE Aldehyde dehydrogenase X, mitochondrial OS=Mus musculus GN=Aldh1b1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 477 bits (1227), Expect = e-134, Method: Compositional matrix adjust.
Identities = 233/405 (57%), Positives = 299/405 (73%), Gaps = 2/405 (0%)
Query: 42 GYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGE 101
G +T+ S AAA +PI P ++ Y +L IN ++ D+ S KTFPT++P TG+VI HVAEG+
Sbjct: 16 GRTTSYSTAAALPNPIPNP-EICYNKLFINNEWHDAVSKKTFPTVNPTTGEVIGHVAEGD 74
Query: 102 AEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE 160
DV+ AV AAR+AF G PW RM A ER +++ R ADL+ER +A+LET DNGKPF+
Sbjct: 75 RADVDLAVKAAREAFRLGSPWRRMDASERGRLLNRLADLVERDRVYLASLETLDNGKPFQ 134
Query: 161 QSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220
+S ++ +++RY+AGWADK G T P DG + T HEP+GV GQIIPWNFPL+M
Sbjct: 135 ESYVLDLDEVIKVYRYFAGWADKWHGKTIPMDGEHFCFTRHEPVGVCGQIIPWNFPLVMQ 194
Query: 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 280
WK+ PALA GNT+V+K AEQTPLSALY++ L+ EAG PPGV+NI++GYGPTAGAA+A H
Sbjct: 195 GWKLAPALATGNTVVMKVAEQTPLSALYLASLIKEAGFPPGVVNIITGYGPTAGAAIAQH 254
Query: 281 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 340
M+VDK+AFTGST G ++ + A +SNLK VTLELGGKSP IV DAD++ A + H ALF
Sbjct: 255 MDVDKVAFTGSTEVGHLIQKAAGESNLKRVTLELGGKSPSIVLADADMEHAVDQCHEALF 314
Query: 341 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 400
FN GQCCCAGSRTFV ES+Y +F+E+ A +R VG+PF+ QQGPQ+D EQFE+IL
Sbjct: 315 FNMGQCCCAGSRTFVEESIYREFLERTVEKAKQRKVGNPFELDTQQGPQVDKEQFERILG 374
Query: 401 YIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASI 445
YIR G GAKL GGERLG +G++IKPTVF V+ + I+ I
Sbjct: 375 YIRLGQKEGAKLLCGGERLGERGFFIKPTVFGDVQDGMRIAKEEI 419
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ALDHs play a major role in the detoxification of alcohol-derived acetaldehyde. They are involved in the metabolism of corticosteroids, biogenic amines, neurotransmitters, and lipid peroxidation. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P20000|ALDH2_BOVIN Aldehyde dehydrogenase, mitochondrial OS=Bos taurus GN=ALDH2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 476 bits (1224), Expect = e-133, Method: Compositional matrix adjust.
Identities = 235/405 (58%), Positives = 290/405 (71%), Gaps = 2/405 (0%)
Query: 42 GYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGE 101
G S+A A P P +V Y Q+ IN ++ D+ S KTFPT++P TGDVI HVAEG+
Sbjct: 17 GRRLLSAATQAVPTPNQQP-EVLYNQIFINNEWHDAVSKKTFPTVNPSTGDVICHVAEGD 75
Query: 102 AEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE 160
DV+RAV AAR AF G PW RM A ER +++ R ADL+ER +AALET DNGKP+
Sbjct: 76 KADVDRAVKAARAAFQLGSPWRRMDASERGRLLNRLADLIERDRTYLAALETLDNGKPYI 135
Query: 161 QSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220
S ++ M + RYYAGWADK G T P DG Y T HEP+GV GQIIPWNFPLLM
Sbjct: 136 ISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQ 195
Query: 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 280
AWK+GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+N++ G+GPTAGAA+ASH
Sbjct: 196 AWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIASH 255
Query: 281 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 340
+VDK+AFTGST G ++ A KSNLK VTLELGGKSP I+ DAD+D A E AH+ALF
Sbjct: 256 EDVDKVAFTGSTEVGHLIQVAAGKSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF 315
Query: 341 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 400
FNQGQCCCAGSRTFV E +Y +FVE++ A A RVVG+PF +QGPQ+D QF+K+L
Sbjct: 316 FNQGQCCCAGSRTFVQEDIYAEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKVLG 375
Query: 401 YIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASI 445
YI+SG + GAKL GG +GY+I+PTVF V+ + I+ I
Sbjct: 376 YIKSGKEEGAKLLCGGGAAADRGYFIQPTVFGDVQDGMTIAKEEI 420
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Bos taurus (taxid: 9913) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q2XQV4|ALDH2_PIG Aldehyde dehydrogenase, mitochondrial OS=Sus scrofa GN=ALDH2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 476 bits (1224), Expect = e-133, Method: Compositional matrix adjust.
Identities = 231/385 (60%), Positives = 284/385 (73%), Gaps = 1/385 (0%)
Query: 62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-P 120
++ Y Q+ IN ++ D+ S KTFPT++P TGDVI HVAEG+ EDV+RAV AAR AF G P
Sbjct: 37 EIFYNQIFINNEWHDAISKKTFPTVNPSTGDVICHVAEGDKEDVDRAVEAARAAFQLGSP 96
Query: 121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
W R+ A +R +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGW
Sbjct: 97 WRRLDASDRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGW 156
Query: 181 ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 240
ADK G T P DG Y T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K +E
Sbjct: 157 ADKYHGKTLPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVSE 216
Query: 241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
QTPL+ALYV+ L+ EAG PPGV+NIV GYGPTAGAA+ASH +VDK+AFTGST G ++
Sbjct: 217 QTPLTALYVANLIKEAGFPPGVVNIVPGYGPTAGAAIASHEDVDKVAFTGSTEVGHLIQV 276
Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
A KSNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCCAGSRTFV E +Y
Sbjct: 277 AAGKSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIY 336
Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 420
+FVE++ A A RVVG+PF +QGPQID QF+KIL YI+SG + GAKL GG
Sbjct: 337 AEFVERSVARARSRVVGNPFDSRTEQGPQIDETQFKKILGYIKSGKEEGAKLLCGGGAAA 396
Query: 421 AKGYYIKPTVFTGVKVLILISPASI 445
+GY+I+PTVF V+ + I+ I
Sbjct: 397 DRGYFIQPTVFGDVQDGMTIAKEEI 421
|
Is capable of converting retinaldehyde to retinoic acid. Sus scrofa (taxid: 9823) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P30837|AL1B1_HUMAN Aldehyde dehydrogenase X, mitochondrial OS=Homo sapiens GN=ALDH1B1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 475 bits (1223), Expect = e-133, Method: Compositional matrix adjust.
Identities = 231/405 (57%), Positives = 296/405 (73%), Gaps = 2/405 (0%)
Query: 42 GYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGE 101
G + S+AAA PI P + Y QL IN ++ D+ S KTFPT++P TG+VI HVAEG+
Sbjct: 14 GRTARYSSAAALPSPILNP-DIPYNQLFINNEWQDAVSKKTFPTVNPTTGEVIGHVAEGD 72
Query: 102 AEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE 160
DV+RAV AAR+AF G PW RM A ER +++ ADL+ER +A+LET DNGKPF+
Sbjct: 73 RADVDRAVKAAREAFRLGSPWRRMDASERGRLLNLLADLVERDRVYLASLETLDNGKPFQ 132
Query: 161 QSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220
+S ++ +++RY+AGWADK G T P DG + T HEP+GV GQIIPWNFPL+M
Sbjct: 133 ESYALDLDEVIKVYRYFAGWADKWHGKTIPMDGQHFCFTRHEPVGVCGQIIPWNFPLVMQ 192
Query: 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 280
WK+ PALA GNT+V+K AEQTPLSALY++ L+ EAG PPGV+NI++GYGPTAGAA+A H
Sbjct: 193 GWKLAPALATGNTVVMKVAEQTPLSALYLASLIKEAGFPPGVVNIITGYGPTAGAAIAQH 252
Query: 281 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 340
++VDK+AFTGST G ++ + A SNLK VTLELGGKSP IV DAD++ A E H ALF
Sbjct: 253 VDVDKVAFTGSTEVGHLIQKAAGDSNLKRVTLELGGKSPSIVLADADMEHAVEQCHEALF 312
Query: 341 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 400
FN GQCCCAGSRTFV ES+Y++F+E+ A +R VG+PF+ QQGPQ+D EQFE++L
Sbjct: 313 FNMGQCCCAGSRTFVEESIYNEFLERTVEKAKQRKVGNPFELDTQQGPQVDKEQFERVLG 372
Query: 401 YIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASI 445
YI+ G GAKL GGER G +G++IKPTVF GV+ + I+ I
Sbjct: 373 YIQLGQKEGAKLLCGGERFGERGFFIKPTVFGGVQDDMRIAKEEI 417
|
ALDHs play a major role in the detoxification of alcohol-derived acetaldehyde. They are involved in the metabolism of corticosteroids, biogenic amines, neurotransmitters, and lipid peroxidation. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q5RF00|ALDH2_PONAB Aldehyde dehydrogenase, mitochondrial OS=Pongo abelii GN=ALDH2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 469 bits (1208), Expect = e-131, Method: Compositional matrix adjust.
Identities = 235/417 (56%), Positives = 291/417 (69%), Gaps = 1/417 (0%)
Query: 30 LCRAAAAAAASCGYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPR 89
+ RAAA G S+AA A +V Q+ IN ++ D+ S KTFPT++P
Sbjct: 1 MLRAAARFGPRLGRRLLSAAATQAVPAPNQQPEVFCNQIFINNEWHDAVSRKTFPTVNPS 60
Query: 90 TGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIA 148
TG+VI VAEG+ EDV++AV AAR AF G PW RM A R +++ R ADL+ER +A
Sbjct: 61 TGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLA 120
Query: 149 ALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAG 208
ALET DNGKP+ S ++ M + RYYAGWADK G T P DG + T HEP+GV G
Sbjct: 121 ALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCG 180
Query: 209 QIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSG 268
QIIPWNFPLLM AWK+GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G
Sbjct: 181 QIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPG 240
Query: 269 YGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 328
+GPTAGAA+ASH +VDK+AFTGST G+++ A SNLK VTLELGGKSP I+ DAD+
Sbjct: 241 FGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADM 300
Query: 329 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGP 388
D A E AH+ALFFNQGQCCCAGSRTFV E +YD+FVE++ A A RVVG+PF +QGP
Sbjct: 301 DWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGP 360
Query: 389 QIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASI 445
Q+D QF+KIL YI +G GAKL GG +GY+I+PTVF V+ + I+ I
Sbjct: 361 QVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEI 417
|
Is capable of converting retinaldehyde to retinoic acid. Pongo abelii (taxid: 9601) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P05091|ALDH2_HUMAN Aldehyde dehydrogenase, mitochondrial OS=Homo sapiens GN=ALDH2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 469 bits (1208), Expect = e-131, Method: Compositional matrix adjust.
Identities = 235/417 (56%), Positives = 291/417 (69%), Gaps = 1/417 (0%)
Query: 30 LCRAAAAAAASCGYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPR 89
+ RAAA G S+AA A +V Q+ IN ++ D+ S KTFPT++P
Sbjct: 1 MLRAAARFGPRLGRRLLSAAATQAVPAPNQQPEVFCNQIFINNEWHDAVSRKTFPTVNPS 60
Query: 90 TGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIA 148
TG+VI VAEG+ EDV++AV AAR AF G PW RM A R +++ R ADL+ER +A
Sbjct: 61 TGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLA 120
Query: 149 ALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAG 208
ALET DNGKP+ S ++ M + RYYAGWADK G T P DG + T HEP+GV G
Sbjct: 121 ALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCG 180
Query: 209 QIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSG 268
QIIPWNFPLLM AWK+GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G
Sbjct: 181 QIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPG 240
Query: 269 YGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 328
+GPTAGAA+ASH +VDK+AFTGST G+++ A SNLK VTLELGGKSP I+ DAD+
Sbjct: 241 FGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADM 300
Query: 329 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGP 388
D A E AH+ALFFNQGQCCCAGSRTFV E +YD+FVE++ A A RVVG+PF +QGP
Sbjct: 301 DWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGP 360
Query: 389 QIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASI 445
Q+D QF+KIL YI +G GAKL GG +GY+I+PTVF V+ + I+ I
Sbjct: 361 QVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEI 417
|
Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 459 | ||||||
| 356497822 | 538 | PREDICTED: aldehyde dehydrogenase family | 0.945 | 0.806 | 0.766 | 0.0 | |
| 356501653 | 539 | PREDICTED: aldehyde dehydrogenase family | 0.938 | 0.799 | 0.769 | 0.0 | |
| 224064707 | 540 | predicted protein [Populus trichocarpa] | 0.952 | 0.809 | 0.756 | 0.0 | |
| 223452696 | 534 | mitochondrial benzaldehyde dehydrogenase | 0.943 | 0.810 | 0.757 | 0.0 | |
| 356567618 | 536 | PREDICTED: aldehyde dehydrogenase family | 0.875 | 0.75 | 0.812 | 0.0 | |
| 225424691 | 538 | PREDICTED: aldehyde dehydrogenase family | 0.867 | 0.739 | 0.821 | 0.0 | |
| 356526813 | 536 | PREDICTED: aldehyde dehydrogenase family | 0.875 | 0.75 | 0.800 | 0.0 | |
| 225452510 | 535 | PREDICTED: aldehyde dehydrogenase family | 0.945 | 0.811 | 0.755 | 0.0 | |
| 297850852 | 534 | hypothetical protein ARALYDRAFT_472641 [ | 0.941 | 0.808 | 0.757 | 0.0 | |
| 162464260 | 549 | mitochondrial aldehyde dehydrogenase 2 [ | 0.845 | 0.706 | 0.814 | 0.0 |
| >gi|356497822|ref|XP_003517756.1| PREDICTED: aldehyde dehydrogenase family 2 member B7, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/445 (76%), Positives = 388/445 (87%), Gaps = 11/445 (2%)
Query: 2 AARRIPLLLSRSFTSSSPT-LFSRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITPP 60
++ RI LLSRSF S+S T LFSR + A + S AAA E+PI PP
Sbjct: 3 SSMRISRLLSRSFLSASTTPLFSR----------GGSGALGAGLSKFSTAAAIEEPIKPP 52
Query: 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP 120
VKV++TQLLI+G+FVD+A+GKTFPTLDPRTGDVI+HVAEG+ EDV+RAV+AARKAFD GP
Sbjct: 53 VKVEHTQLLIDGKFVDAATGKTFPTLDPRTGDVISHVAEGDHEDVDRAVAAARKAFDHGP 112
Query: 121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
WP+MTAYER +I+LR ADL E+HNDE+AALETWDNGKP+EQSAQ E+PM RLFRYYAGW
Sbjct: 113 WPKMTAYERQRILLRAADLFEKHNDELAALETWDNGKPYEQSAQIEIPMLVRLFRYYAGW 172
Query: 181 ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 240
ADKI GLT PADGPYHVQTLHEPIGVAGQIIPWNFPL+MFAWKVGPALACGNTIVLKTAE
Sbjct: 173 ADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLVMFAWKVGPALACGNTIVLKTAE 232
Query: 241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
QTPLSALY SKLLHEAGLPPGVLN++SG+GPTAGAA+ASHM++DKLAFTGST TGK+VL+
Sbjct: 233 QTPLSALYASKLLHEAGLPPGVLNVISGFGPTAGAAIASHMDIDKLAFTGSTETGKVVLE 292
Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
LAA+SNLKPVTLELGGKSPFIVCEDADVD+A ELAH+ALFFNQGQCCCAGSRTFVHE VY
Sbjct: 293 LAARSNLKPVTLELGGKSPFIVCEDADVDEAVELAHFALFFNQGQCCCAGSRTFVHERVY 352
Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 420
D+F+EKA A A+KR VGDPFKGGI+QGPQIDSEQF+KILKYIRSGV+ GA LETGG+R G
Sbjct: 353 DEFIEKAKARALKRAVGDPFKGGIEQGPQIDSEQFQKILKYIRSGVESGATLETGGDRFG 412
Query: 421 AKGYYIKPTVFTGVKVLILISPASI 445
G+YI+PTVF+ VK +LI+ I
Sbjct: 413 NSGFYIQPTVFSNVKDDMLIAKEEI 437
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356501653|ref|XP_003519638.1| PREDICTED: aldehyde dehydrogenase family 2 member B7, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/443 (76%), Positives = 386/443 (87%), Gaps = 12/443 (2%)
Query: 5 RIPLLLSRSFTSSSPT--LFSRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITPPVK 62
RI LLSRSF S+S T LFSR + A + S AAA E+PI PP+K
Sbjct: 6 RISRLLSRSFLSASTTTPLFSR----------GGSGALGAGLSKFSTAAAIEEPIKPPLK 55
Query: 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP 122
V++TQLLI+G+FVD+A+GKTFPTLDPRTGDVI+HVAEG+ EDV+RAV+AARKAFD GPWP
Sbjct: 56 VEHTQLLIDGKFVDAATGKTFPTLDPRTGDVISHVAEGDHEDVDRAVAAARKAFDRGPWP 115
Query: 123 RMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWAD 182
+MTAYER +I+LR ADL E+HND++AALETWDNGKP+EQSAQ E+PM RLFRYYAGWAD
Sbjct: 116 KMTAYERQRILLRAADLFEKHNDDLAALETWDNGKPYEQSAQIEIPMLVRLFRYYAGWAD 175
Query: 183 KIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242
KI GLT PADGPYHVQTLHEPIGVAGQIIPWNFPL+MFAWKVGPALACGNTIVLKTAEQT
Sbjct: 176 KIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLVMFAWKVGPALACGNTIVLKTAEQT 235
Query: 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
PLSALY SKLLHEAGLPPGVLNI+SG+GPTAGAA+ASHM++DKLAFTGST TGKIVL+LA
Sbjct: 236 PLSALYASKLLHEAGLPPGVLNIISGFGPTAGAAIASHMDIDKLAFTGSTETGKIVLELA 295
Query: 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 362
A+SNLKPVTLELGGKSPFIVCEDADVD+A ELAH+ALFFNQGQCCCAGSRTFVHE VYD+
Sbjct: 296 ARSNLKPVTLELGGKSPFIVCEDADVDEAVELAHFALFFNQGQCCCAGSRTFVHERVYDE 355
Query: 363 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 422
F+EKA A A+KR VGDPFKGGI+QGPQIDSEQF+KILKYIRSGV+ GA LETGG+R G
Sbjct: 356 FIEKAKARALKRAVGDPFKGGIEQGPQIDSEQFQKILKYIRSGVESGATLETGGDRFGNS 415
Query: 423 GYYIKPTVFTGVKVLILISPASI 445
G+YI+PTVF+ VK +LI+ I
Sbjct: 416 GFYIQPTVFSNVKDDMLIAKEEI 438
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224064707|ref|XP_002301540.1| predicted protein [Populus trichocarpa] gi|222843266|gb|EEE80813.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/447 (75%), Positives = 383/447 (85%), Gaps = 10/447 (2%)
Query: 1 MAARRIPLLLSRSFTSSS--PTLFSRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPIT 58
MAA++I +LSRSF+S++ P FSR R S S ++ AA EDPIT
Sbjct: 1 MAAKKISTVLSRSFSSAAAPPCFFSRVR--------GGGGQSRLISRYNTTLAAVEDPIT 52
Query: 59 PPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDE 118
PPV V Y QLLINGQFVD+ASGKTFPTLDPRTG+VI HVAEG+ EDVNRAVSAARKAFDE
Sbjct: 53 PPVSVKYNQLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDVEDVNRAVSAARKAFDE 112
Query: 119 GPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA 178
GPWPRMTAYERS+II RFADLLE+H DEIAALETWDNGKP+EQSA+ E+PMT R+FRYYA
Sbjct: 113 GPWPRMTAYERSRIIWRFADLLEKHTDEIAALETWDNGKPYEQSAKIEIPMTVRIFRYYA 172
Query: 179 GWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 238
GWADKI GLT PADGPYHVQTLHEPIGVAGQIIPWNFP+LMF+WKVGPALACGNT+V+KT
Sbjct: 173 GWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPMLMFSWKVGPALACGNTVVIKT 232
Query: 239 AEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 298
AEQTPLSA+Y +KL HEAGLP GVLN+VSG+GPTAGAALASHM+VDKLAFTGST TGKIV
Sbjct: 233 AEQTPLSAVYAAKLFHEAGLPDGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIV 292
Query: 299 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 358
L+LA+KSNLKPVTLELGGKSPFIVCEDADVD+A EL+H A+FFNQGQCCCAGSRTFVHE
Sbjct: 293 LELASKSNLKPVTLELGGKSPFIVCEDADVDQAVELSHSAVFFNQGQCCCAGSRTFVHER 352
Query: 359 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER 418
VYD+FVEKA A A +R VGDPFK GI+QGPQ+DS+QFEKIL+ IRSGV+ GA L+ GG+R
Sbjct: 353 VYDEFVEKAKARANQRAVGDPFKEGIEQGPQVDSDQFEKILRIIRSGVESGANLKAGGDR 412
Query: 419 LGAKGYYIKPTVFTGVKVLILISPASI 445
G GYYI+PTVF+ V+ +LI+ I
Sbjct: 413 FGTTGYYIQPTVFSDVQDDMLIAKEEI 439
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|223452696|gb|ACM89738.1| mitochondrial benzaldehyde dehydrogenase [Antirrhinum majus] | Back alignment and taxonomy information |
|---|
Score = 706 bits (1821), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/445 (75%), Positives = 378/445 (84%), Gaps = 12/445 (2%)
Query: 1 MAARRIPLLLSRSFTSSSPTLFSRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITPP 60
MAA R LLSRS P L G+ S L R Y ++AAAA E+PI PP
Sbjct: 1 MAAHRFSSLLSRSV----PLLSRGGKQSYLGRGV--------YRYGTAAAAALEEPIKPP 48
Query: 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP 120
V V Y +LLINGQFVD+ASGKTFPTLDPR+G+VI HVAEG+AED+NRAV+AARKAFDEGP
Sbjct: 49 VSVQYDKLLINGQFVDAASGKTFPTLDPRSGEVIAHVAEGDAEDINRAVAAARKAFDEGP 108
Query: 121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
WP+M AYER KI+LRFADL+E+HNDE+AALE WD+GKP+EQ AQ E+PM RLFRYYAGW
Sbjct: 109 WPKMPAYERQKIMLRFADLVEKHNDEVAALEAWDSGKPYEQCAQVEIPMFVRLFRYYAGW 168
Query: 181 ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 240
ADKI GLT PADGP+HVQTLHEPIGVAGQIIPWNFPL+MF WKVGPALACGN++VLKTAE
Sbjct: 169 ADKIHGLTIPADGPHHVQTLHEPIGVAGQIIPWNFPLVMFGWKVGPALACGNSVVLKTAE 228
Query: 241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
QTPLSAL VSKL HEAGLP GVLNIVSG+GPTAGAAL HM+VDKLAFTGST TGKIVL+
Sbjct: 229 QTPLSALLVSKLFHEAGLPEGVLNIVSGFGPTAGAALCRHMDVDKLAFTGSTETGKIVLE 288
Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
L+AKSNLKPVTLELGGKSPFIVCEDADVDKA ELAH+ALFFNQGQCCCAGSRTFVHE VY
Sbjct: 289 LSAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHEKVY 348
Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 420
D+FVEKA A A+KR VGDPFK G++QGPQ+D++QFEKILKYIRSG + GA LETGG+RLG
Sbjct: 349 DEFVEKAKARALKRTVGDPFKAGMEQGPQVDADQFEKILKYIRSGAESGATLETGGDRLG 408
Query: 421 AKGYYIKPTVFTGVKVLILISPASI 445
KGYYI+PTVF+ VK +LI+ I
Sbjct: 409 TKGYYIQPTVFSDVKDDMLIAKDEI 433
|
Source: Antirrhinum majus Species: Antirrhinum majus Genus: Antirrhinum Family: Plantaginaceae Order: Lamiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356567618|ref|XP_003552014.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/405 (81%), Positives = 370/405 (91%), Gaps = 3/405 (0%)
Query: 41 CGYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEG 100
C YST+S A E+P+ P V+V++TQLLI+G+FVD+ASGKTFPTLDPRTG+VI HVAEG
Sbjct: 34 CKYSTSS---AIEEEPVKPSVQVEHTQLLIDGKFVDAASGKTFPTLDPRTGEVIAHVAEG 90
Query: 101 EAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE 160
+EDV+RAV+AARKAFD GPWP+MTAYER +I+LR ADLLE+HNDE+AALETWDNGKP+E
Sbjct: 91 HSEDVDRAVAAARKAFDHGPWPKMTAYERQRILLRAADLLEKHNDELAALETWDNGKPYE 150
Query: 161 QSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220
Q+A+ EVPM RL RYYAGWADKI GLT PADGPYHVQTLHEPIGVAGQIIPWNFPLLMF
Sbjct: 151 QAAKIEVPMLVRLIRYYAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 210
Query: 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 280
AWKVGPALACGNTIVLKTAEQTPLSALY +KL HEAGLP GVLN+VSG+GPTAGAALASH
Sbjct: 211 AWKVGPALACGNTIVLKTAEQTPLSALYAAKLFHEAGLPAGVLNVVSGFGPTAGAALASH 270
Query: 281 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 340
MEVDKLAFTGST TGK+VL+LAAKSNLKPVTLELGGKSPFIVCEDADVD+A ELAH+ALF
Sbjct: 271 MEVDKLAFTGSTDTGKVVLELAAKSNLKPVTLELGGKSPFIVCEDADVDQAVELAHFALF 330
Query: 341 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 400
FNQGQCCCAGSRTFVHESVYD+FVEKA A A+KRVVGDPFKGGI+QGPQIDS+QFEKIL+
Sbjct: 331 FNQGQCCCAGSRTFVHESVYDEFVEKAKARALKRVVGDPFKGGIEQGPQIDSDQFEKILR 390
Query: 401 YIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASI 445
YIRSGV+ GA LETGG++LG KG+YI+PTVF+ VK +LI+ I
Sbjct: 391 YIRSGVESGATLETGGDKLGNKGFYIQPTVFSNVKDGMLIARDEI 435
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225424691|ref|XP_002263479.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial [Vitis vinifera] gi|296086543|emb|CBI32132.3| unnamed protein product [Vitis vinifera] gi|426204222|gb|AFY12671.1| mitochondrial aldehyde dehydrogenase 2B8 [Vitis quinquangularis] | Back alignment and taxonomy information |
|---|
Score = 699 bits (1804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/398 (82%), Positives = 363/398 (91%)
Query: 48 SAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNR 107
S AA E+PI P V V+YTQLLINGQFVD+A+GKTF TLDPRTG+VI VAEG+AEDVNR
Sbjct: 40 STAAVVEEPINPSVNVNYTQLLINGQFVDAATGKTFETLDPRTGNVIASVAEGDAEDVNR 99
Query: 108 AVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEV 167
AVSAARKAFDEGPWPRM+ YERSKI+LRFADLLE+HNDEIAALETWDNGKPFEQ+A+ EV
Sbjct: 100 AVSAARKAFDEGPWPRMSPYERSKILLRFADLLEKHNDEIAALETWDNGKPFEQAAKAEV 159
Query: 168 PMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 227
P+ RL RYYAGWADKI GLT PADG + VQTLHEPIGVAGQIIPWNFPLLM+AWK+GPA
Sbjct: 160 PLVIRLMRYYAGWADKIHGLTVPADGLHQVQTLHEPIGVAGQIIPWNFPLLMYAWKIGPA 219
Query: 228 LACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLA 287
LACGNTIVLKTAEQTPLSALY SKLLHEAGLPPGVLN+VSGYGPTAGAALASHM+VDKLA
Sbjct: 220 LACGNTIVLKTAEQTPLSALYASKLLHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLA 279
Query: 288 FTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCC 347
FTGST TGKIVLQLAA+SNLKPVTLELGGKSPFIVCEDA+VD+A ELAH+ALFFNQGQCC
Sbjct: 280 FTGSTATGKIVLQLAARSNLKPVTLELGGKSPFIVCEDANVDEAVELAHFALFFNQGQCC 339
Query: 348 CAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD 407
CAGSRTFVHES+YD+FVEKA A A++R VGDPFK GI+QGPQIDS+QFEKIL+YIRSGV+
Sbjct: 340 CAGSRTFVHESIYDEFVEKAKARALRRTVGDPFKAGIEQGPQIDSDQFEKILRYIRSGVE 399
Query: 408 GGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASI 445
GA LETGGER G +G++IKPTVF+ V+ +LI+ I
Sbjct: 400 NGATLETGGERFGKEGFFIKPTVFSNVQDGMLIAQDEI 437
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356526813|ref|XP_003532011.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/402 (80%), Positives = 368/402 (91%)
Query: 44 STASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAE 103
S S++AA E+PI P ++V++TQLLI+G+FVD+ASGKTF TLDPRTG+VI HVAEG +E
Sbjct: 34 SKFSTSAAIEEEPIKPSIQVEHTQLLIDGKFVDAASGKTFQTLDPRTGEVIAHVAEGHSE 93
Query: 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163
DV+RAVSAARKAFD GPWP+MTAYER +I+LR ADL+E+HNDE+AALETWDNGKP+EQ+A
Sbjct: 94 DVDRAVSAARKAFDHGPWPKMTAYERQRILLRVADLIEKHNDELAALETWDNGKPYEQAA 153
Query: 164 QTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223
+ EVPM RL RYYAGWADKI GLT PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK
Sbjct: 154 KIEVPMLVRLIRYYAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 213
Query: 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 283
VGPALACGNTIVLKTAEQTPLSALY +KL HEAGLP GVLN+VSG+GPTAGAALASHMEV
Sbjct: 214 VGPALACGNTIVLKTAEQTPLSALYAAKLFHEAGLPAGVLNVVSGFGPTAGAALASHMEV 273
Query: 284 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 343
DKLAFTGST TGK+VL+LAAKSNLKPVTLELGGKSPFIVCEDADVD+A ELAH+ALFFNQ
Sbjct: 274 DKLAFTGSTDTGKVVLELAAKSNLKPVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQ 333
Query: 344 GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 403
GQCCCAGSRTFVHE+VY++FV+KA A A++RVVGDPFKGGI+QGPQIDS+QFEKIL+YIR
Sbjct: 334 GQCCCAGSRTFVHENVYEEFVQKAKARALRRVVGDPFKGGIEQGPQIDSDQFEKILRYIR 393
Query: 404 SGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASI 445
SGV+ GA LETGG++LG KG+YI+PTVF+ VK +LI+ I
Sbjct: 394 SGVESGATLETGGDKLGNKGFYIQPTVFSNVKDGMLIAKDEI 435
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225452510|ref|XP_002274863.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial [Vitis vinifera] gi|296087691|emb|CBI34947.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/445 (75%), Positives = 380/445 (85%), Gaps = 11/445 (2%)
Query: 1 MAARRIPLLLSRSFTSSSPTLFSRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITPP 60
MAA RI LLS S T++S L S GR S R G S S+A A E+PITPP
Sbjct: 1 MAAPRIFSLLSASSTAAS--LRSFGRYSRWGR---------GSSRFSTAVATEEEPITPP 49
Query: 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP 120
V++DYTQLLING+FVD+ASGKTFPTLDPRTGDVI HVAEGEAED+NRAVSAARKAFDEGP
Sbjct: 50 VQIDYTQLLINGRFVDAASGKTFPTLDPRTGDVIAHVAEGEAEDINRAVSAARKAFDEGP 109
Query: 121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
WP+MT YERS I+ RFADLLE+H EIAALE+WDNGKP+EQ+A E+PM R+FRYYAGW
Sbjct: 110 WPKMTPYERSCILFRFADLLEKHCSEIAALESWDNGKPYEQAANVEIPMVIRVFRYYAGW 169
Query: 181 ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 240
ADKI GLT PADG +HVQTLHEPIGVAGQIIPWNFPLL++ WKVGPALACGNTIVLKTAE
Sbjct: 170 ADKIHGLTVPADGLHHVQTLHEPIGVAGQIIPWNFPLLLYGWKVGPALACGNTIVLKTAE 229
Query: 241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
QTPLSALY SKLL+EAGLPPGVLN+VSG+GPTAGAAL+SHM+VDKLAFTGST TGKIVL
Sbjct: 230 QTPLSALYASKLLYEAGLPPGVLNVVSGFGPTAGAALSSHMDVDKLAFTGSTGTGKIVLG 289
Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
LAAKSNLKPVTLELGGKSPFIVCEDADVDKA EL+H ALF+NQGQ CC+GSRTFVHES+Y
Sbjct: 290 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELSHTALFYNQGQSCCSGSRTFVHESIY 349
Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 420
D+F+EKA A A+KRVVGDPFK G++QGPQIDS+QF KIL YI+SG++ GA LE GGE+
Sbjct: 350 DEFIEKAKARALKRVVGDPFKKGVEQGPQIDSQQFNKILGYIKSGIEAGATLEAGGEKFS 409
Query: 421 AKGYYIKPTVFTGVKVLILISPASI 445
+KGYYI+PTVF+ V +LI+ I
Sbjct: 410 SKGYYIQPTVFSNVHDNMLIAKEEI 434
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297850852|ref|XP_002893307.1| hypothetical protein ARALYDRAFT_472641 [Arabidopsis lyrata subsp. lyrata] gi|297339149|gb|EFH69566.1| hypothetical protein ARALYDRAFT_472641 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/446 (75%), Positives = 384/446 (86%), Gaps = 14/446 (3%)
Query: 1 MAARRIPLLLSRSFTSSSPTLFS-RGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITP 59
MA+RR+ LLSRSF SSSP+LFS RG + G S+AAAA E+ ITP
Sbjct: 1 MASRRVSSLLSRSFMSSSPSLFSLRGMNR-------------GAQRYSNAAAAVENTITP 47
Query: 60 PVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG 119
PVKV++TQLLI G+FVD+ SGKTFPTLDPR G+VI VAEG+AEDVNRAV+AARKAFDEG
Sbjct: 48 PVKVEHTQLLIGGRFVDAVSGKTFPTLDPRNGEVIAQVAEGDAEDVNRAVAAARKAFDEG 107
Query: 120 PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179
PWPRMTAYERSKI+ RFADL+E+HNDEIAALETWDNGKP+EQS Q EVPM R+FRYYAG
Sbjct: 108 PWPRMTAYERSKILFRFADLIEKHNDEIAALETWDNGKPYEQSVQIEVPMLARVFRYYAG 167
Query: 180 WADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239
WADKI G+T P DGP+HVQTLHEPIGVAGQIIPWNFPLLM +WK+GPALACGNTIVLKTA
Sbjct: 168 WADKIHGMTMPGDGPHHVQTLHEPIGVAGQIIPWNFPLLMLSWKLGPALACGNTIVLKTA 227
Query: 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299
EQTPLSAL V KLLHEAGLP GV+NIVSG+G TAGAA+ASHM+VDK+AFTGST GKI+L
Sbjct: 228 EQTPLSALLVGKLLHEAGLPDGVVNIVSGFGATAGAAIASHMDVDKVAFTGSTDVGKIIL 287
Query: 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
+LA+KSNLK VTLELGGKSPFIVCEDADVD+A ELAH+ALFFNQGQCCCAGSRTFVHE V
Sbjct: 288 ELASKSNLKAVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTFVHERV 347
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 419
YD+FVEKA A A+KR VGDPFK GI+QGPQ+DSEQF+KILKYI+ GV+ GA L+ GG+RL
Sbjct: 348 YDEFVEKAKARALKRNVGDPFKSGIEQGPQVDSEQFKKILKYIKYGVEAGATLQAGGDRL 407
Query: 420 GAKGYYIKPTVFTGVKVLILISPASI 445
G+KGYYI+PTVF+ VK +LI+ I
Sbjct: 408 GSKGYYIQPTVFSDVKDDMLIATDEI 433
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|162464260|ref|NP_001105891.1| mitochondrial aldehyde dehydrogenase 2 [Zea mays] gi|12004294|gb|AAG43988.1|AF215823_1 T cytoplasm male sterility restorer factor 2 [Zea mays] gi|1421730|gb|AAC49371.1| RF2 [Zea mays] gi|195637116|gb|ACG38026.1| aldehyde dehydrogenase [Zea mays] gi|223948941|gb|ACN28554.1| unknown [Zea mays] gi|413953663|gb|AFW86312.1| restorer of fertility2 [Zea mays] | Back alignment and taxonomy information |
|---|
Score = 689 bits (1778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/388 (81%), Positives = 357/388 (92%)
Query: 48 SAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNR 107
S AAA E+PITP V V+YT+LLING FVDSASGKTFPTLDPRTG+VI HVAEG+AED+NR
Sbjct: 51 STAAAVEEPITPSVHVNYTKLLINGNFVDSASGKTFPTLDPRTGEVIAHVAEGDAEDINR 110
Query: 108 AVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEV 167
AV+AARKAFDEGPWP+MTAYERS+I+LRFADL+E+HNDE+AALETWDNGKP+EQ+AQ EV
Sbjct: 111 AVAAARKAFDEGPWPKMTAYERSRILLRFADLIEKHNDELAALETWDNGKPYEQAAQIEV 170
Query: 168 PMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 227
PM RL RYYAGWADKI GL PADGP+HVQ LHEPIGVAGQIIPWNFPLLM+AWKVGPA
Sbjct: 171 PMVARLMRYYAGWADKIHGLIVPADGPHHVQILHEPIGVAGQIIPWNFPLLMYAWKVGPA 230
Query: 228 LACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLA 287
LACGNT+VLKTAEQTPLSALY+SKLLHEAGLP GV+N+VSG+GPTAGAALASHM+VDK+A
Sbjct: 231 LACGNTLVLKTAEQTPLSALYISKLLHEAGLPEGVVNVVSGFGPTAGAALASHMDVDKIA 290
Query: 288 FTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCC 347
FTGST TGKI+L+LAAKSNLK VTLELGGKSPFI+ +DADVD A ELAH+ALFFNQGQCC
Sbjct: 291 FTGSTDTGKIILELAAKSNLKTVTLELGGKSPFIIMDDADVDHAVELAHFALFFNQGQCC 350
Query: 348 CAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD 407
CAGSRTFVHE VYD+FVEKA A A+KRVVGDPF+ G++QGPQID EQF KIL+YIR GVD
Sbjct: 351 CAGSRTFVHERVYDEFVEKAKARALKRVVGDPFRKGVEQGPQIDDEQFNKILRYIRYGVD 410
Query: 408 GGAKLETGGERLGAKGYYIKPTVFTGVK 435
GGA L TGG+RLG KG+YI+PT+F+ V+
Sbjct: 411 GGATLVTGGDRLGDKGFYIQPTIFSDVQ 438
|
Source: Zea mays Species: Zea mays Genus: Zea Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 459 | ||||||
| TAIR|locus:2034855 | 534 | ALDH2B7 "AT1G23800" [Arabidops | 0.941 | 0.808 | 0.737 | 4e-177 | |
| TAIR|locus:2097845 | 538 | ALDH2B4 "AT3G48000" [Arabidops | 0.949 | 0.810 | 0.719 | 2.1e-173 | |
| UNIPROTKB|Q2XQV4 | 521 | ALDH2 "Aldehyde dehydrogenase, | 0.814 | 0.717 | 0.610 | 1.3e-121 | |
| UNIPROTKB|P20000 | 520 | ALDH2 "Aldehyde dehydrogenase, | 0.814 | 0.719 | 0.605 | 4.6e-121 | |
| UNIPROTKB|E2RHQ0 | 449 | ALDH1B1 "Uncharacterized prote | 0.825 | 0.844 | 0.593 | 7.4e-121 | |
| RGD|1306737 | 519 | Aldh1b1 "aldehyde dehydrogenas | 0.827 | 0.732 | 0.596 | 2e-120 | |
| UNIPROTKB|P30837 | 517 | ALDH1B1 "Aldehyde dehydrogenas | 0.825 | 0.733 | 0.587 | 5.2e-120 | |
| UNIPROTKB|F1PBJ8 | 521 | ALDH2 "Uncharacterized protein | 0.836 | 0.737 | 0.594 | 8.5e-120 | |
| MGI|MGI:1919785 | 519 | Aldh1b1 "aldehyde dehydrogenas | 0.827 | 0.732 | 0.589 | 1.1e-119 | |
| UNIPROTKB|F1ST54 | 517 | ALDH1B1 "Uncharacterized prote | 0.825 | 0.733 | 0.590 | 1.4e-119 |
| TAIR|locus:2034855 ALDH2B7 "AT1G23800" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1720 (610.5 bits), Expect = 4.0e-177, P = 4.0e-177
Identities = 329/446 (73%), Positives = 377/446 (84%)
Query: 1 MAARRIPLLLSRSFTSSSPTLFS-RGRDSSLCRXXXXXXXXXXXXXXXXXXXXXEDPITP 59
MA+RR+ LLSRSF SSS ++FS RG + R E+ ITP
Sbjct: 1 MASRRVSSLLSRSFMSSSRSIFSLRGMNRGAQRYSNLAAAV-------------ENTITP 47
Query: 60 PVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG 119
PVKV++TQLLI G+FVD+ SGKTFPTLDPR G+VI V+EG+AEDVNRAV+AARKAFDEG
Sbjct: 48 PVKVEHTQLLIGGRFVDAVSGKTFPTLDPRNGEVIAQVSEGDAEDVNRAVAAARKAFDEG 107
Query: 120 PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179
PWP+MTAYERSKI+ RFADL+E+HNDEIAALETWDNGKP+EQSAQ EVPM R+FRYYAG
Sbjct: 108 PWPKMTAYERSKILFRFADLIEKHNDEIAALETWDNGKPYEQSAQIEVPMLARVFRYYAG 167
Query: 180 WADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239
WADKI G+T P DGP+HVQTLHEPIGVAGQIIPWNFPLLM +WK+GPALACGNT+VLKTA
Sbjct: 168 WADKIHGMTMPGDGPHHVQTLHEPIGVAGQIIPWNFPLLMLSWKLGPALACGNTVVLKTA 227
Query: 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299
EQTPLSAL V KLLHEAGLP GV+NIVSG+G TAGAA+ASHM+VDK+AFTGST GKI+L
Sbjct: 228 EQTPLSALLVGKLLHEAGLPDGVVNIVSGFGATAGAAIASHMDVDKVAFTGSTDVGKIIL 287
Query: 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
+LA+KSNLK VTLELGGKSPFIVCEDADVD+A ELAH+ALFFNQGQCCCAGSRTFVHE V
Sbjct: 288 ELASKSNLKAVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTFVHERV 347
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 419
YD+FVEKA A A+KR VGDPFK GI+QGPQ+DSEQF KILKYI+ GV+ GA L+ GG+RL
Sbjct: 348 YDEFVEKAKARALKRNVGDPFKSGIEQGPQVDSEQFNKILKYIKHGVEAGATLQAGGDRL 407
Query: 420 GAKGYYIKPTVFTGVKVLILISPASI 445
G+KGYYI+PTVF+ VK +LI+ I
Sbjct: 408 GSKGYYIQPTVFSDVKDDMLIATDEI 433
|
|
| TAIR|locus:2097845 ALDH2B4 "AT3G48000" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1685 (598.2 bits), Expect = 2.1e-173, P = 2.1e-173
Identities = 321/446 (71%), Positives = 372/446 (83%)
Query: 1 MAARRIPLLLSRSFTSSSPTLF-SRGRDSSLCRXXXXXXXXXXXXXXXXXXXXXEDPITP 59
MAARR+ LLSRSF++SSP LF S+GR+ C E+ I P
Sbjct: 1 MAARRVSSLLSRSFSASSPLLFRSQGRN---C------YNGGILRRFGTSSAAAEEIINP 51
Query: 60 PVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG 119
V+V +TQLLING FVDSASGKTFPTLDPRTG+VI HVAEG+AED+NRAV AAR AFDEG
Sbjct: 52 SVQVSHTQLLINGNFVDSASGKTFPTLDPRTGEVIAHVAEGDAEDINRAVKAARTAFDEG 111
Query: 120 PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179
PWP+M+AYERS+++LRFADL+E+H++E+A+LETWDNGKP++QS E+PM RLFRYYAG
Sbjct: 112 PWPKMSAYERSRVLLRFADLVEKHSEELASLETWDNGKPYQQSLTAEIPMFARLFRYYAG 171
Query: 180 WADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239
WADKI GLT PADG Y V TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA
Sbjct: 172 WADKIHGLTIPADGNYQVHTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 231
Query: 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299
EQTPL+A Y KL EAGLPPGVLNIVSG+G TAGAALASHM+VDKLAFTGST TGK++L
Sbjct: 232 EQTPLTAFYAGKLFLEAGLPPGVLNIVSGFGATAGAALASHMDVDKLAFTGSTDTGKVIL 291
Query: 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
LAA SNLKPVTLELGGKSPFIV EDAD+DKA ELAH+ALFFNQGQCCCAGSRTFVHE V
Sbjct: 292 GLAANSNLKPVTLELGGKSPFIVFEDADIDKAVELAHFALFFNQGQCCCAGSRTFVHEKV 351
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 419
YD+FVEK+ A A+KRVVGDPF+ GI+QGPQID +QFEK++KYI+SG++ A LE GG+++
Sbjct: 352 YDEFVEKSKARALKRVVGDPFRKGIEQGPQIDLKQFEKVMKYIKSGIESNATLECGGDQI 411
Query: 420 GAKGYYIKPTVFTGVKVLILISPASI 445
G KGY+I+PTVF+ VK +LI+ I
Sbjct: 412 GDKGYFIQPTVFSNVKDDMLIAQDEI 437
|
|
| UNIPROTKB|Q2XQV4 ALDH2 "Aldehyde dehydrogenase, mitochondrial" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1196 (426.1 bits), Expect = 1.3e-121, P = 1.3e-121
Identities = 229/375 (61%), Positives = 280/375 (74%)
Query: 62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-P 120
++ Y Q+ IN ++ D+ S KTFPT++P TGDVI HVAEG+ EDV+RAV AAR AF G P
Sbjct: 37 EIFYNQIFINNEWHDAISKKTFPTVNPSTGDVICHVAEGDKEDVDRAVEAARAAFQLGSP 96
Query: 121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
W R+ A +R +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGW
Sbjct: 97 WRRLDASDRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGW 156
Query: 181 ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 240
ADK G T P DG Y T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K +E
Sbjct: 157 ADKYHGKTLPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVSE 216
Query: 241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
QTPL+ALYV+ L+ EAG PPGV+NIV GYGPTAGAA+ASH +VDK+AFTGST G ++
Sbjct: 217 QTPLTALYVANLIKEAGFPPGVVNIVPGYGPTAGAAIASHEDVDKVAFTGSTEVGHLIQV 276
Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
A KSNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCCAGSRTFV E +Y
Sbjct: 277 AAGKSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIY 336
Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 420
+FVE++ A A RVVG+PF +QGPQID QF+KIL YI+SG + GAKL GG
Sbjct: 337 AEFVERSVARARSRVVGNPFDSRTEQGPQIDETQFKKILGYIKSGKEEGAKLLCGGGAAA 396
Query: 421 AKGYYIKPTVFTGVK 435
+GY+I+PTVF V+
Sbjct: 397 DRGYFIQPTVFGDVQ 411
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| UNIPROTKB|P20000 ALDH2 "Aldehyde dehydrogenase, mitochondrial" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1191 (424.3 bits), Expect = 4.6e-121, P = 4.6e-121
Identities = 227/375 (60%), Positives = 279/375 (74%)
Query: 62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-P 120
+V Y Q+ IN ++ D+ S KTFPT++P TGDVI HVAEG+ DV+RAV AAR AF G P
Sbjct: 36 EVLYNQIFINNEWHDAVSKKTFPTVNPSTGDVICHVAEGDKADVDRAVKAARAAFQLGSP 95
Query: 121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
W RM A ER +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGW
Sbjct: 96 WRRMDASERGRLLNRLADLIERDRTYLAALETLDNGKPYIISYLVDLDMVLKCLRYYAGW 155
Query: 181 ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 240
ADK G T P DG Y T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AE
Sbjct: 156 ADKYHGKTIPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAE 215
Query: 241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
QTPL+ALYV+ L+ EAG PPGV+N++ G+GPTAGAA+ASH +VDK+AFTGST G ++
Sbjct: 216 QTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQV 275
Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
A KSNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCCAGSRTFV E +Y
Sbjct: 276 AAGKSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIY 335
Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 420
+FVE++ A A RVVG+PF +QGPQ+D QF+K+L YI+SG + GAKL GG
Sbjct: 336 AEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKVLGYIKSGKEEGAKLLCGGGAAA 395
Query: 421 AKGYYIKPTVFTGVK 435
+GY+I+PTVF V+
Sbjct: 396 DRGYFIQPTVFGDVQ 410
|
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| UNIPROTKB|E2RHQ0 ALDH1B1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1189 (423.6 bits), Expect = 7.4e-121, P = 7.4e-121
Identities = 226/381 (59%), Positives = 285/381 (74%)
Query: 56 PITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKA 115
PI P + Y QL IN ++ D+AS KTFPT++P TG+VI HVAEG+ DV+RAV AAR+A
Sbjct: 31 PILNP-DIRYNQLFINNEWQDAASKKTFPTVNPTTGEVIGHVAEGDRADVDRAVKAAREA 89
Query: 116 FDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLF 174
F G PW RM A ER +++ R ADL+ER +A+LET DNGKPF++S ++ +++
Sbjct: 90 FRLGSPWRRMDASERGRLLNRLADLVERDRVYLASLETLDNGKPFQESYALDLDEVIKVY 149
Query: 175 RYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTI 234
RY+AGWADK G T P DG + T HEP+GV GQIIPWNFPL+M WK+ PALA GNT+
Sbjct: 150 RYFAGWADKWHGKTIPMDGEHFCFTRHEPVGVCGQIIPWNFPLVMQGWKLAPALATGNTV 209
Query: 235 VLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTT 294
V+K AEQTPLSALY++ L+ EAG PPGV+N+V+GYGPTAGAA+A HM++DK+AFTGST
Sbjct: 210 VMKVAEQTPLSALYLASLIKEAGFPPGVVNVVTGYGPTAGAAIARHMDIDKVAFTGSTEV 269
Query: 295 GKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTF 354
G ++ + A SNLK VTLELGGKSP +V DAD++ A H ALFFN GQCCCAGSRTF
Sbjct: 270 GHLIQKAAGDSNLKRVTLELGGKSPSVVLADADMEHAVAQCHEALFFNMGQCCCAGSRTF 329
Query: 355 VHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLET 414
V ES+YD+F+E+ A +R VG+PF+ QQGPQ+D EQFE+IL YIR G GAKL
Sbjct: 330 VQESIYDEFLERTVEKAKQRRVGNPFELDTQQGPQVDKEQFERILNYIRLGQKEGAKLLC 389
Query: 415 GGERLGAKGYYIKPTVFTGVK 435
GGER G +G++IKPTVF V+
Sbjct: 390 GGERFGDRGFFIKPTVFGDVQ 410
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| RGD|1306737 Aldh1b1 "aldehyde dehydrogenase 1 family, member B1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1185 (422.2 bits), Expect = 2.0e-120, P = 2.0e-120
Identities = 228/382 (59%), Positives = 284/382 (74%)
Query: 55 DPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARK 114
+PI P ++ Y QL IN ++ D+ S KTFPT++P TG+VI HVAEG+ DV+ AV AAR+
Sbjct: 29 NPIPNP-EIRYNQLFINNEWHDAVSKKTFPTVNPTTGEVIGHVAEGDRADVDLAVRAARE 87
Query: 115 AFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRL 173
AF G PW RM A ER +++ R ADL+ER +A+LET DNGKPF++S ++ ++
Sbjct: 88 AFRLGSPWRRMDASERGRLLNRLADLVERDRVYLASLETLDNGKPFQESYVLDLDEVIKV 147
Query: 174 FRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 233
+RY AGWADK G T P DG + T HEP+GV GQIIPWNFPL+M WK+ PALA GNT
Sbjct: 148 YRYLAGWADKWHGKTIPMDGEHFCFTRHEPVGVCGQIIPWNFPLVMQGWKLAPALATGNT 207
Query: 234 IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 293
+V+K AEQTPLSALY++ L+ EAG PPGV+NI++GYGPTAGAA+A HM+VDK+AFTGST
Sbjct: 208 VVMKVAEQTPLSALYLASLIKEAGFPPGVVNIITGYGPTAGAAIAQHMDVDKVAFTGSTE 267
Query: 294 TGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRT 353
G ++ + A SNLK VTLELGGKSP IV DAD+D A + H ALFFN GQCCCAGSRT
Sbjct: 268 VGHLIQKAAGDSNLKRVTLELGGKSPSIVLADADMDHAVDQCHEALFFNMGQCCCAGSRT 327
Query: 354 FVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLE 413
FV ES+Y +F+E+ A KR VG+PF+ QQGPQ+D EQFEKIL YIR G GAKL
Sbjct: 328 FVEESIYHEFLERTVEKAKKRKVGNPFELDTQQGPQVDKEQFEKILGYIRLGQKEGAKLL 387
Query: 414 TGGERLGAKGYYIKPTVFTGVK 435
GGER G +G++IKPTVF V+
Sbjct: 388 CGGERFGERGFFIKPTVFGNVQ 409
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| UNIPROTKB|P30837 ALDH1B1 "Aldehyde dehydrogenase X, mitochondrial" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1181 (420.8 bits), Expect = 5.2e-120, P = 5.2e-120
Identities = 224/381 (58%), Positives = 285/381 (74%)
Query: 56 PITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKA 115
PI P + Y QL IN ++ D+ S KTFPT++P TG+VI HVAEG+ DV+RAV AAR+A
Sbjct: 28 PILNP-DIPYNQLFINNEWQDAVSKKTFPTVNPTTGEVIGHVAEGDRADVDRAVKAAREA 86
Query: 116 FDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLF 174
F G PW RM A ER +++ ADL+ER +A+LET DNGKPF++S ++ +++
Sbjct: 87 FRLGSPWRRMDASERGRLLNLLADLVERDRVYLASLETLDNGKPFQESYALDLDEVIKVY 146
Query: 175 RYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTI 234
RY+AGWADK G T P DG + T HEP+GV GQIIPWNFPL+M WK+ PALA GNT+
Sbjct: 147 RYFAGWADKWHGKTIPMDGQHFCFTRHEPVGVCGQIIPWNFPLVMQGWKLAPALATGNTV 206
Query: 235 VLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTT 294
V+K AEQTPLSALY++ L+ EAG PPGV+NI++GYGPTAGAA+A H++VDK+AFTGST
Sbjct: 207 VMKVAEQTPLSALYLASLIKEAGFPPGVVNIITGYGPTAGAAIAQHVDVDKVAFTGSTEV 266
Query: 295 GKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTF 354
G ++ + A SNLK VTLELGGKSP IV DAD++ A E H ALFFN GQCCCAGSRTF
Sbjct: 267 GHLIQKAAGDSNLKRVTLELGGKSPSIVLADADMEHAVEQCHEALFFNMGQCCCAGSRTF 326
Query: 355 VHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLET 414
V ES+Y++F+E+ A +R VG+PF+ QQGPQ+D EQFE++L YI+ G GAKL
Sbjct: 327 VEESIYNEFLERTVEKAKQRKVGNPFELDTQQGPQVDKEQFERVLGYIQLGQKEGAKLLC 386
Query: 415 GGERLGAKGYYIKPTVFTGVK 435
GGER G +G++IKPTVF GV+
Sbjct: 387 GGERFGERGFFIKPTVFGGVQ 407
|
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| UNIPROTKB|F1PBJ8 ALDH2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1179 (420.1 bits), Expect = 8.5e-120, P = 8.5e-120
Identities = 229/385 (59%), Positives = 282/385 (73%)
Query: 62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-P 120
+V Y Q+ IN ++ D+ S KTFPT++P TG+VI VAEG+ EDV++AV AAR AF G P
Sbjct: 37 EVFYNQIFINNEWHDAVSKKTFPTINPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSP 96
Query: 121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
W RM A +R +++ R ADL+ER +AALET DNGKP+ S ++ M R RYYAGW
Sbjct: 97 WRRMDASDRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLRCLRYYAGW 156
Query: 181 ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 240
ADK G T P DG + T HEP+GV GQIIPWNFPLLM AWK+GPALA GN IV+K AE
Sbjct: 157 ADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVIVMKVAE 216
Query: 241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
QTPL+ALYV+ L+ EAG PPGV+NI+ G+GPTAGAA+ASH +VDK+AFTGST G +V
Sbjct: 217 QTPLTALYVANLIKEAGFPPGVVNIIPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLVQV 276
Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
A SNLK VTLELGGKSP I+ DAD++ A E AH+ALFFNQGQCCCAGSRTFV E VY
Sbjct: 277 AAGNSNLKRVTLELGGKSPNIIMSDADMNWAVEQAHFALFFNQGQCCCAGSRTFVQEDVY 336
Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 420
+FVE++ A A RVVG+PF +QGPQ+D QF+KIL YI+SG + GAKL GG
Sbjct: 337 AEFVERSVARAKSRVVGNPFDSQTEQGPQVDETQFKKILGYIKSGKEEGAKLLCGGGAAA 396
Query: 421 AKGYYIKPTVFTGVKVLILISPASI 445
+GY+I+PTVF V+ + I+ I
Sbjct: 397 DRGYFIQPTVFGDVQDTMTIAKEEI 421
|
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| MGI|MGI:1919785 Aldh1b1 "aldehyde dehydrogenase 1 family, member B1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1178 (419.7 bits), Expect = 1.1e-119, P = 1.1e-119
Identities = 225/382 (58%), Positives = 287/382 (75%)
Query: 55 DPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARK 114
+PI P ++ Y +L IN ++ D+ S KTFPT++P TG+VI HVAEG+ DV+ AV AAR+
Sbjct: 29 NPIPNP-EICYNKLFINNEWHDAVSKKTFPTVNPTTGEVIGHVAEGDRADVDLAVKAARE 87
Query: 115 AFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRL 173
AF G PW RM A ER +++ R ADL+ER +A+LET DNGKPF++S ++ ++
Sbjct: 88 AFRLGSPWRRMDASERGRLLNRLADLVERDRVYLASLETLDNGKPFQESYVLDLDEVIKV 147
Query: 174 FRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 233
+RY+AGWADK G T P DG + T HEP+GV GQIIPWNFPL+M WK+ PALA GNT
Sbjct: 148 YRYFAGWADKWHGKTIPMDGEHFCFTRHEPVGVCGQIIPWNFPLVMQGWKLAPALATGNT 207
Query: 234 IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 293
+V+K AEQTPLSALY++ L+ EAG PPGV+NI++GYGPTAGAA+A HM+VDK+AFTGST
Sbjct: 208 VVMKVAEQTPLSALYLASLIKEAGFPPGVVNIITGYGPTAGAAIAQHMDVDKVAFTGSTE 267
Query: 294 TGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRT 353
G ++ + A +SNLK VTLELGGKSP IV DAD++ A + H ALFFN GQCCCAGSRT
Sbjct: 268 VGHLIQKAAGESNLKRVTLELGGKSPSIVLADADMEHAVDQCHEALFFNMGQCCCAGSRT 327
Query: 354 FVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLE 413
FV ES+Y +F+E+ A +R VG+PF+ QQGPQ+D EQFE+IL YIR G GAKL
Sbjct: 328 FVEESIYREFLERTVEKAKQRKVGNPFELDTQQGPQVDKEQFERILGYIRLGQKEGAKLL 387
Query: 414 TGGERLGAKGYYIKPTVFTGVK 435
GGERLG +G++IKPTVF V+
Sbjct: 388 CGGERLGERGFFIKPTVFGDVQ 409
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| UNIPROTKB|F1ST54 ALDH1B1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1177 (419.4 bits), Expect = 1.4e-119, P = 1.4e-119
Identities = 225/381 (59%), Positives = 284/381 (74%)
Query: 56 PITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKA 115
PI P + Y QL IN ++ D+ S KTF T++P TG+VI HVAEG+ DV+RAV AAR+A
Sbjct: 28 PILNP-DIRYNQLFINNEWQDAVSKKTFQTVNPTTGEVIGHVAEGDQADVDRAVKAAREA 86
Query: 116 FDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLF 174
F G PW RM A ER +++ R ADL+ER +A+LET DNGKPF++S ++ +++
Sbjct: 87 FRLGSPWRRMDASERGRLLNRLADLVERDRVYLASLETLDNGKPFQESYALDLDEVIKVY 146
Query: 175 RYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTI 234
RY+AGWADK G T P DG + T HEP+GV GQIIPWNFPL+M AWK+ PALA GNT+
Sbjct: 147 RYFAGWADKWHGKTIPMDGEHFCFTRHEPVGVCGQIIPWNFPLVMQAWKLAPALATGNTV 206
Query: 235 VLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTT 294
V+K AEQTPLSALY++ L+ E G PPGV+NI++GYGPTAG A+A HM+V+K+AFTGST
Sbjct: 207 VMKVAEQTPLSALYLASLIKEVGFPPGVVNILTGYGPTAGTAIAHHMDVNKVAFTGSTEV 266
Query: 295 GKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTF 354
G ++ + A SNLK VTLELGGKSP IV DAD+D A E H ALFFN GQCCCAGSRTF
Sbjct: 267 GHLIQKAAGDSNLKRVTLELGGKSPSIVLADADMDHAVEQCHEALFFNMGQCCCAGSRTF 326
Query: 355 VHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLET 414
V ES+YD+F+E+ A +R VG+PF+ QQGPQ++ EQFE+IL YI+ G GAKL
Sbjct: 327 VEESIYDEFLERTVEKAKRRKVGNPFELDTQQGPQVNKEQFERILGYIQLGQKEGAKLLC 386
Query: 415 GGERLGAKGYYIKPTVFTGVK 435
GGER G +G++IKPTVF GV+
Sbjct: 387 GGERFGERGFFIKPTVFGGVQ 407
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P41751 | ALDH_ASPNG | 1, ., 2, ., 1, ., 3 | 0.5153 | 0.8431 | 0.7786 | yes | no |
| Q9SU63 | AL2B4_ARATH | 1, ., 2, ., 1, ., 3 | 0.7264 | 0.9498 | 0.8104 | yes | no |
| O34660 | ALDH4_BACSU | 1, ., 2, ., 1, ., 3 | 0.5092 | 0.8235 | 0.7636 | yes | no |
| P30837 | AL1B1_HUMAN | 1, ., 2, ., 1, ., 3 | 0.5703 | 0.8779 | 0.7794 | yes | no |
| Q9CZS1 | AL1B1_MOUSE | 1, ., 2, ., 1, ., 3 | 0.5753 | 0.8779 | 0.7764 | yes | no |
| Q5R6B5 | AL1B1_PONAB | 1, ., 2, ., 1, ., 3 | 0.5753 | 0.8779 | 0.7794 | yes | no |
| P08157 | ALDH_EMENI | 1, ., 2, ., 1, ., 3 | 0.5447 | 0.8366 | 0.7726 | yes | no |
| O14293 | YF19_SCHPO | 1, ., 2, ., 1, ., - | 0.5052 | 0.8213 | 0.7495 | yes | no |
| P20000 | ALDH2_BOVIN | 1, ., 2, ., 1, ., 3 | 0.5802 | 0.8779 | 0.775 | yes | no |
| Q2XQV4 | ALDH2_PIG | 1, ., 2, ., 1, ., 3 | 0.6 | 0.8366 | 0.7370 | yes | no |
| Q66HF8 | AL1B1_RAT | 1, ., 2, ., 1, ., 3 | 0.5827 | 0.8779 | 0.7764 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.2.1 | 0.976 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | estExt_fgenesh4_pm.C_LG_II0915 | aldehyde dehydrogenase (NAD+) (EC-1.2.1.3) (541 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | eugene3.00140876 | acetate-CoA ligase (EC-6.2.1.1) (684 aa) | • | • | 0.927 | ||||||
 | gw1.V.4399.1 | hypothetical protein (495 aa) | • | • | • | 0.903 | |||||
 | gw1.I.2279.1 | hypothetical protein (496 aa) | • | • | • | 0.903 | |||||
 | gw1.IX.2836.1 | SubName- Full=Putative uncharacterized protein; (481 aa) | • | • | • | 0.903 | |||||
 | gw1.IX.2840.1 | SubName- Full=Putative uncharacterized protein; (496 aa) | • | • | • | 0.903 | |||||
 | estExt_fgenesh4_pg.C_LG_IV0428 | pyruvate decarboxylase (EC-4.1.1.1) (582 aa) | • | • | 0.902 | ||||||
 | gw1.XI.3391.1 | pyruvate decarboxylase (EC-4.1.1.1) (574 aa) | • | • | 0.902 | ||||||
 | estExt_fgenesh4_pm.C_LG_XVI0442 | pyruvate decarboxylase (EC-4.1.1.1) (606 aa) | • | 0.901 | |||||||
 | eugene3.00060891 | pyruvate decarboxylase (EC-4.1.1.1) (606 aa) | • | 0.901 | |||||||
 | gw1.XIV.108.1 | annotation not avaliable (356 aa) | • | 0.899 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 459 | |||
| PLN02466 | 538 | PLN02466, PLN02466, aldehyde dehydrogenase family | 0.0 | |
| cd07142 | 476 | cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen | 0.0 | |
| cd07091 | 476 | cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH | 0.0 | |
| cd07141 | 481 | cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin | 0.0 | |
| PLN02766 | 501 | PLN02766, PLN02766, coniferyl-aldehyde dehydrogena | 0.0 | |
| pfam00171 | 459 | pfam00171, Aldedh, Aldehyde dehydrogenase family | 1e-174 | |
| cd07143 | 481 | cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al | 1e-169 | |
| cd07144 | 484 | cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi | 1e-169 | |
| cd07112 | 462 | cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+ | 1e-162 | |
| COG1012 | 472 | COG1012, PutA, NAD-dependent aldehyde dehydrogenas | 1e-153 | |
| cd07119 | 482 | cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de | 1e-153 | |
| cd07078 | 432 | cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog | 1e-151 | |
| cd07114 | 457 | cd07114, ALDH_DhaS, Uncharacterized Candidatus pel | 1e-150 | |
| cd07115 | 453 | cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens | 1e-147 | |
| cd07093 | 455 | cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen | 1e-141 | |
| cd07140 | 486 | cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate | 1e-138 | |
| cd07559 | 480 | cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu | 1e-138 | |
| cd07109 | 454 | cd07109, ALDH_AAS00426, Uncharacterized Saccharopo | 1e-134 | |
| cd07103 | 451 | cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina | 1e-130 | |
| PRK13252 | 488 | PRK13252, PRK13252, betaine aldehyde dehydrogenase | 1e-127 | |
| cd07088 | 468 | cd07088, ALDH_LactADH-AldA, Escherichia coli lacta | 1e-127 | |
| cd07138 | 466 | cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox | 1e-126 | |
| PRK13473 | 475 | PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd | 1e-125 | |
| cd07117 | 475 | cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo | 1e-125 | |
| cd07118 | 454 | cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos | 1e-122 | |
| cd07139 | 471 | cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo | 1e-122 | |
| cd07110 | 456 | cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy | 1e-121 | |
| cd07090 | 457 | cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy | 1e-121 | |
| cd07097 | 473 | cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+ | 1e-120 | |
| cd07111 | 480 | cd07111, ALDH_F16, Aldehyde dehydrogenase family 1 | 1e-119 | |
| TIGR01804 | 467 | TIGR01804, BADH, glycine betaine aldehyde dehydrog | 1e-119 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 1e-118 | |
| cd07092 | 450 | cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d | 1e-118 | |
| cd07089 | 459 | cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6- | 1e-117 | |
| PLN02467 | 503 | PLN02467, PLN02467, betaine aldehyde dehydrogenase | 1e-116 | |
| cd07116 | 479 | cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD | 1e-115 | |
| PRK09847 | 494 | PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty | 1e-112 | |
| TIGR02299 | 488 | TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate | 1e-111 | |
| cd07108 | 457 | cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d | 1e-111 | |
| cd07106 | 446 | cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac | 1e-109 | |
| cd07131 | 478 | cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi | 1e-109 | |
| cd07113 | 477 | cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep | 1e-106 | |
| PLN02278 | 498 | PLN02278, PLN02278, succinic semialdehyde dehydrog | 1e-103 | |
| cd07124 | 512 | cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline- | 1e-102 | |
| cd07107 | 456 | cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben | 1e-101 | |
| cd07104 | 431 | cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P) | 1e-100 | |
| cd07149 | 453 | cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi | 1e-99 | |
| cd07086 | 478 | cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha | 7e-97 | |
| cd07150 | 451 | cd07150, ALDH_VaniDH_like, Pseudomonas putida vani | 1e-96 | |
| TIGR03216 | 481 | TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia | 2e-96 | |
| TIGR01780 | 448 | TIGR01780, SSADH, succinate-semialdehyde dehydroge | 5e-94 | |
| cd07145 | 456 | cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu | 2e-93 | |
| cd07099 | 453 | cd07099, ALDH_DDALDH, Methylomonas sp | 1e-89 | |
| PRK03137 | 514 | PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy | 2e-89 | |
| cd07151 | 465 | cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb | 7e-87 | |
| PRK11241 | 482 | PRK11241, gabD, succinate-semialdehyde dehydrogena | 9e-86 | |
| TIGR03374 | 472 | TIGR03374, ABALDH, 1-pyrroline dehydrogenase | 1e-84 | |
| PRK09407 | 524 | PRK09407, gabD2, succinic semialdehyde dehydrogena | 1e-84 | |
| cd07120 | 455 | cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al | 4e-84 | |
| cd07152 | 443 | cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde | 2e-83 | |
| cd07100 | 429 | cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul | 8e-83 | |
| cd07085 | 478 | cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd | 8e-83 | |
| cd07105 | 432 | cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena | 9e-82 | |
| cd07146 | 451 | cd07146, ALDH_PhpJ, Streptomyces putative phosphon | 3e-79 | |
| PRK10090 | 409 | PRK10090, PRK10090, aldehyde dehydrogenase A; Prov | 5e-79 | |
| cd07101 | 454 | cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul | 7e-79 | |
| cd07082 | 473 | cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph | 7e-79 | |
| cd07094 | 453 | cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA | 1e-78 | |
| cd07102 | 452 | cd07102, ALDH_EDX86601, Uncharacterized aldehyde d | 5e-78 | |
| TIGR04284 | 480 | TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, | 4e-77 | |
| TIGR01237 | 511 | TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb | 1e-70 | |
| cd07147 | 452 | cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f | 2e-69 | |
| cd07130 | 474 | cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin | 9e-68 | |
| cd07098 | 465 | cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil | 5e-66 | |
| cd07083 | 500 | cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent | 1e-62 | |
| PRK09406 | 457 | PRK09406, gabD1, succinic semialdehyde dehydrogena | 2e-60 | |
| TIGR03250 | 472 | TIGR03250, PhnAcAld_DH, putative phosphonoacetalde | 8e-60 | |
| cd07095 | 431 | cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem | 3e-58 | |
| cd07125 | 518 | cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car | 4e-57 | |
| TIGR01722 | 477 | TIGR01722, MMSDH, methylmalonic acid semialdehyde | 1e-54 | |
| cd07087 | 426 | cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: | 6e-52 | |
| PRK09457 | 487 | PRK09457, astD, succinylglutamic semialdehyde dehy | 8e-52 | |
| TIGR01238 | 500 | TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb | 9e-51 | |
| COG4230 | 769 | COG4230, COG4230, Delta 1-pyrroline-5-carboxylate | 2e-50 | |
| PRK11904 | 1038 | PRK11904, PRK11904, bifunctional proline dehydroge | 5e-50 | |
| PRK11905 | 1208 | PRK11905, PRK11905, bifunctional proline dehydroge | 2e-48 | |
| cd07134 | 433 | cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy | 1e-47 | |
| TIGR03240 | 484 | TIGR03240, arg_catab_astD, succinylglutamic semial | 2e-47 | |
| cd07148 | 455 | cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031 | 1e-44 | |
| cd07135 | 436 | cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia | 2e-44 | |
| cd07136 | 449 | cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh | 1e-43 | |
| cd07133 | 434 | cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd | 1e-43 | |
| PLN02419 | 604 | PLN02419, PLN02419, methylmalonate-semialdehyde de | 4e-43 | |
| PLN00412 | 496 | PLN00412, PLN00412, NADP-dependent glyceraldehyde- | 3e-42 | |
| PLN02315 | 508 | PLN02315, PLN02315, aldehyde dehydrogenase family | 9e-42 | |
| cd07123 | 522 | cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca | 3e-39 | |
| TIGR01236 | 532 | TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb | 3e-38 | |
| PRK13968 | 462 | PRK13968, PRK13968, putative succinate semialdehyd | 5e-37 | |
| PTZ00381 | 493 | PTZ00381, PTZ00381, aldehyde dehydrogenase family | 7e-36 | |
| cd07132 | 443 | cd07132, ALDH_F3AB, Aldehyde dehydrogenase family | 1e-35 | |
| PRK11809 | 1318 | PRK11809, putA, trifunctional transcriptional regu | 3e-34 | |
| cd07084 | 442 | cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+ | 6e-28 | |
| cd07137 | 432 | cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase | 1e-27 | |
| PLN02174 | 484 | PLN02174, PLN02174, aldehyde dehydrogenase family | 2e-21 | |
| PLN02203 | 484 | PLN02203, PLN02203, aldehyde dehydrogenase | 2e-19 | |
| PRK11903 | 521 | PRK11903, PRK11903, aldehyde dehydrogenase; Provis | 4e-19 | |
| cd07128 | 513 | cd07128, ALDH_MaoC-N, N-terminal domain of the mon | 1e-16 | |
| cd07126 | 489 | cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carb | 7e-14 | |
| cd07129 | 454 | cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh | 2e-13 | |
| cd07077 | 397 | cd07077, ALDH-like, NAD(P)+-dependent aldehyde deh | 3e-13 | |
| TIGR02278 | 663 | TIGR02278, PaaN-DH, phenylacetic acid degradation | 3e-13 | |
| PRK11563 | 675 | PRK11563, PRK11563, bifunctional aldehyde dehydrog | 4e-09 | |
| cd07121 | 429 | cd07121, ALDH_EutE, Ethanolamine utilization prote | 7e-06 | |
| cd07081 | 439 | cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acyla | 1e-05 | |
| cd07122 | 436 | cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldeh | 4e-04 | |
| PRK15398 | 465 | PRK15398, PRK15398, aldehyde dehydrogenase EutE; P | 5e-04 | |
| TIGR02288 | 551 | TIGR02288, PaaN_2, phenylacetic acid degradation p | 0.004 |
| >gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Score = 843 bits (2180), Expect = 0.0
Identities = 358/446 (80%), Positives = 397/446 (89%), Gaps = 10/446 (2%)
Query: 1 MAARRIPLLLSRSFTSSSPTLF-SRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITP 59
MAARRI LLSRS ++SS L SRGR+ R G S+AAAA E+PITP
Sbjct: 1 MAARRISSLLSRSLSASSSALLRSRGRNGGRGR---------GIRRFSTAAAAVEEPITP 51
Query: 60 PVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG 119
PV+V YTQLLINGQFVD+ASGKTFPTLDPRTG+VI HVAEG+AEDVNRAV+AARKAFDEG
Sbjct: 52 PVQVSYTQLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEG 111
Query: 120 PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179
PWP+MTAYERS+I+LRFADLLE+HNDE+AALETWDNGKP+EQSA+ E+PM RLFRYYAG
Sbjct: 112 PWPKMTAYERSRILLRFADLLEKHNDELAALETWDNGKPYEQSAKAELPMFARLFRYYAG 171
Query: 180 WADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239
WADKI GLT PADGP+HVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA
Sbjct: 172 WADKIHGLTVPADGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 231
Query: 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299
EQTPLSALY +KLLHEAGLPPGVLN+VSG+GPTAGAALASHM+VDKLAFTGST TGKIVL
Sbjct: 232 EQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVL 291
Query: 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
+LAAKSNLKPVTLELGGKSPFIVCEDADVDKA ELAH+ALFFNQGQCCCAGSRTFVHE V
Sbjct: 292 ELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERV 351
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 419
YD+FVEKA A A+KRVVGDPFK G++QGPQIDSEQFEKIL+YI+SGV+ GA LE GG+R
Sbjct: 352 YDEFVEKAKARALKRVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRF 411
Query: 420 GAKGYYIKPTVFTGVKVLILISPASI 445
G+KGYYI+PTVF+ V+ +LI+ I
Sbjct: 412 GSKGYYIQPTVFSNVQDDMLIAQDEI 437
|
Length = 538 |
| >gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Score = 731 bits (1890), Expect = 0.0
Identities = 297/373 (79%), Positives = 336/373 (90%)
Query: 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP 122
V +T+L INGQFVD+ASGKTFPT+DPR G+VI HVAEG+AEDV+RAV AARKAFDEGPWP
Sbjct: 1 VKHTKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWP 60
Query: 123 RMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWAD 182
RMT YERS+I+LRFADLLE+H DE+AALETWDNGKP+EQ+ EVP+ RLFRYYAGWAD
Sbjct: 61 RMTGYERSRILLRFADLLEKHADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWAD 120
Query: 183 KIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242
KI G+T PADGP+HV TLHEPIGV GQIIPWNFPLLMFAWKVGPALACGNTIVLK AEQT
Sbjct: 121 KIHGMTLPADGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQT 180
Query: 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
PLSAL +KL EAGLP GVLNIV+G+GPTAGAA+ASHM+VDK+AFTGST GKI++QLA
Sbjct: 181 PLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLA 240
Query: 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 362
AKSNLKPVTLELGGKSPFIVCEDADVDKA ELAH+ALFFNQGQCCCAGSRTFVHES+YD+
Sbjct: 241 AKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDE 300
Query: 363 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 422
FVEKA A A+KRVVGDPF+ G++QGPQ+D EQFEKIL YI G + GA L TGG+R+G+K
Sbjct: 301 FVEKAKARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSK 360
Query: 423 GYYIKPTVFTGVK 435
GYYI+PT+F+ VK
Sbjct: 361 GYYIQPTIFSDVK 373
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476 |
| >gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Score = 653 bits (1688), Expect = 0.0
Identities = 239/370 (64%), Positives = 288/370 (77%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
T L IN +FVDS SGKTFPT++P T +VI VAE + EDV+ AV AAR AF+ G W +M
Sbjct: 4 TGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMD 63
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
ER +++ + ADL+ER DE+AALE+ DNGKP E+SA+ +V ++ + RYYAGWADKIQ
Sbjct: 64 PRERGRLLNKLADLIERDRDELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQ 123
Query: 186 GLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
G T P DG + T EPIGV GQIIPWNFPLLM AWK+ PALA GNT+VLK AEQTPLS
Sbjct: 124 GKTIPIDGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLS 183
Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
ALY+++L+ EAG PPGV+NIV G+GPTAGAA++SHM+VDK+AFTGST G+ +++ AAKS
Sbjct: 184 ALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAKS 243
Query: 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365
NLK VTLELGGKSP IV +DAD+DKA E A + +FFNQGQCCCAGSR FV ES+YD+FVE
Sbjct: 244 NLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVE 303
Query: 366 KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYY 425
K A A KRVVGDPF QGPQ+ QF+KIL YI SG GA L TGGER G+KGY+
Sbjct: 304 KFKARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYF 363
Query: 426 IKPTVFTGVK 435
I+PTVFT VK
Sbjct: 364 IQPTVFTDVK 373
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476 |
| >gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Score = 615 bits (1588), Expect = 0.0
Identities = 231/376 (61%), Positives = 286/376 (76%), Gaps = 1/376 (0%)
Query: 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG- 119
++ YT++ IN ++ DS SGKTFPT++P TG+ I V EG+ DV++AV AAR AF G
Sbjct: 2 PEIKYTKIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGS 61
Query: 120 PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179
PW M A ER +++ + ADL+ER +A+LET DNGKPF +S ++P ++ RYYAG
Sbjct: 62 PWRTMDASERGRLLNKLADLIERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAG 121
Query: 180 WADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239
WADKI G T P DG + T HEP+GV GQIIPWNFPLLM AWK+ PALACGNT+VLK A
Sbjct: 122 WADKIHGKTIPMDGDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPA 181
Query: 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299
EQTPL+ALY++ L+ EAG PPGV+N+V GYGPTAGAA++SH ++DK+AFTGST GK++
Sbjct: 182 EQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQ 241
Query: 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
Q A KSNLK VTLELGGKSP IV DAD+D A E AH ALFFN GQCCCAGSRTFV ES+
Sbjct: 242 QAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESI 301
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 419
YD+FV+++ A KRVVG+PF +QGPQID EQF+KIL+ I SG GAKLE GG+R
Sbjct: 302 YDEFVKRSVERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRH 361
Query: 420 GAKGYYIKPTVFTGVK 435
G KGY+I+PTVF+ V
Sbjct: 362 GDKGYFIQPTVFSDVT 377
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481 |
| >gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 528 bits (1362), Expect = 0.0
Identities = 216/384 (56%), Positives = 276/384 (71%)
Query: 62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPW 121
++ +T+L ING+FVD+ASGKTF T DPRTG+VI +AEG+ EDV+ AV AAR+AFD GPW
Sbjct: 17 EIKFTKLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPW 76
Query: 122 PRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA 181
PRM+ +ER +I+++FADL+E H +E+AAL+T D GK F ++P L RYYAG A
Sbjct: 77 PRMSGFERGRIMMKFADLIEEHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAA 136
Query: 182 DKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
DKI G T TL EPIGV G IIPWNFP MF KV PALA G T+V+K AEQ
Sbjct: 137 DKIHGETLKMSRQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQ 196
Query: 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
TPLSAL+ + L AG+P GV+N+V+G+GPTAGAA+ASHM+VDK++FTGST G+ ++Q
Sbjct: 197 TPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQA 256
Query: 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
AA SNLK V+LELGGKSP ++ +DADVD A +LA +F+N+G+ C A SR +V E +YD
Sbjct: 257 AATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYD 316
Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 421
+FV+K A VVGDPF +QGPQ+D +QFEKIL YI G GA L TGG+ G
Sbjct: 317 EFVKKLVEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGD 376
Query: 422 KGYYIKPTVFTGVKVLILISPASI 445
KGYYI+PT+FT V + I+ I
Sbjct: 377 KGYYIEPTIFTDVTEDMKIAQDEI 400
|
Length = 501 |
| >gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 496 bits (1279), Expect = e-174
Identities = 185/362 (51%), Positives = 234/362 (64%), Gaps = 5/362 (1%)
Query: 74 FVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKII 133
+VDS S +T ++P TG+VI V AEDV+ AV+AAR AF W + ER+ I+
Sbjct: 1 WVDS-SSETIEVINPATGEVIATVPAATAEDVDAAVAAARAAFKA--WAKTPPSERAAIL 57
Query: 134 LRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADG 193
L+ ADLLE DE+A LET + GKP + A+ EVP RYYAG A K++G T P+D
Sbjct: 58 LKAADLLEERRDELAELETLETGKPLAE-ARGEVPRAIDTLRYYAGLARKLEGETLPSDP 116
Query: 194 PYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLL 253
T EP+GV G I PWNFPLL+ AWK+ PALA GNT+VLK +E TPL+AL +++L
Sbjct: 117 GVLAYTRREPLGVVGAITPWNFPLLLAAWKIAPALAAGNTVVLKPSELTPLTALLLAELF 176
Query: 254 HEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLE 313
EAGLPPGVLN+V+G G G AL H +VDK++FTGST G+ + + AAK NLK VTLE
Sbjct: 177 EEAGLPPGVLNVVTGSGSEVGDALVEHPDVDKVSFTGSTEVGRRIAKAAAK-NLKRVTLE 235
Query: 314 LGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK 373
LGGK+P IV +DAD+D A E A + F N GQ C AGSR VHES+YD+FVE+ A
Sbjct: 236 LGGKNPLIVFDDADLDAAVEGAVFGAFGNAGQVCTAGSRLLVHESIYDEFVERLVEAAKS 295
Query: 374 RVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTG 433
VGDP GP I +Q E++L YI + GAKL GGE KGY+++PTV
Sbjct: 296 LKVGDPLDPDTDIGPLISKKQRERVLSYIEDAKEEGAKLLCGGEAGLEKGYFVEPTVLAD 355
Query: 434 VK 435
V
Sbjct: 356 VT 357
|
This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459 |
| >gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Score = 484 bits (1248), Expect = e-169
Identities = 201/370 (54%), Positives = 255/370 (68%), Gaps = 2/370 (0%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPR-M 124
T L ING+FVDS G T +P TG +IT +AE DV+ AV A AF E W +
Sbjct: 7 TGLFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAF-ETDWGLKV 65
Query: 125 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184
+ +R + + + ADL+ER+ D +A++E DNGK F + + +V + FRYY GWADKI
Sbjct: 66 SGSKRGRCLSKLADLMERNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKI 125
Query: 185 QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G D T HEPIGV GQIIPWNFPLLM AWK+ PALA GNTIVLK +E TPL
Sbjct: 126 HGQVIETDIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPL 185
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
SALY++KL+ EAG PPGV+N+VSGYG T G A++SHM++DK+AFTGST G+ V++ AAK
Sbjct: 186 SALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAK 245
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
SNLK VTLELGGKSP IV +DAD++ A Y +FFN GQ CCAGSR +V E +YD+FV
Sbjct: 246 SNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFV 305
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 424
++ A K VGDPF QGPQ+ Q+E+I+ YI SG GA +ETGG+R G +GY
Sbjct: 306 KRFKEKAKKLKVGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGY 365
Query: 425 YIKPTVFTGV 434
+I+PT+FT V
Sbjct: 366 FIEPTIFTDV 375
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481 |
| >gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Score = 484 bits (1247), Expect = e-169
Identities = 194/381 (50%), Positives = 252/381 (66%), Gaps = 9/381 (2%)
Query: 62 KVDYTQ---LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDE 118
Y Q L IN +FV S+ G+T T++P TG+VI V EDV++AV AARKAF E
Sbjct: 1 GKSYDQPTGLFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAF-E 59
Query: 119 GPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA 178
W ++T ER +++ + ADL+E++ D +AA+E D+GKP+ +A ++ + RYYA
Sbjct: 60 SWWSKVTGEERGELLDKLADLVEKNRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYA 119
Query: 179 GWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 238
GWADKIQG T P TLHEP GV GQIIPWN+PL M AWK+ PALA GNT+V+K
Sbjct: 120 GWADKIQGKTIPTSPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKP 179
Query: 239 AEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 298
AE TPLS LY + L+ EAG PPGV+NI+ GYG AG+ALA H +VDK+AFTGST TG++V
Sbjct: 180 AENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLV 239
Query: 299 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 358
++ AA NLK VTLE GGKSP +V EDAD+D+A + A + +N GQ C A SR +V ES
Sbjct: 240 MKAAA-QNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQES 298
Query: 359 VYDQFVEKANALAMKR-VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE 417
+YD+FVEK + VG PF GPQ+ Q++++L YI G GAKL GGE
Sbjct: 299 IYDKFVEKFVEHVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGE 358
Query: 418 RLG---AKGYYIKPTVFTGVK 435
+ KGY+I PT+FT V
Sbjct: 359 KAPEGLGKGYFIPPTIFTDVP 379
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484 |
| >gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Score = 465 bits (1199), Expect = e-162
Identities = 183/360 (50%), Positives = 239/360 (66%), Gaps = 7/360 (1%)
Query: 80 GKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADL 139
G+TF T++P TG V+ VA +A DV+RAV+AAR+AF+ G W R++ ER ++LR ADL
Sbjct: 1 GETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADL 60
Query: 140 LERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQT 199
+E H DE+A LET D GKP + +VP FR+YA DK+ G AP
Sbjct: 61 IEAHRDELALLETLDMGKPISDALAVDVPSAANTFRWYAEAIDKVYGEVAPT--GPDALA 118
Query: 200 L--HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG 257
L EP+GV G ++PWNFPLLM AWK+ PALA GN++VLK AEQ+PL+AL +++L EAG
Sbjct: 119 LITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELALEAG 178
Query: 258 LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 317
LP GVLN+V G+G TAG AL HM+VD LAFTGST G+ L+ + +SNLK V LE GGK
Sbjct: 179 LPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGK 238
Query: 318 SPFIVCEDA-DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 376
SP IV DA D+D AAE A +F+NQG+ C AGSR VHES+ D+F+EK A A +
Sbjct: 239 SPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKP 298
Query: 377 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL--GAKGYYIKPTVFTGV 434
GDP + G + F+K+L YI SG GA+L GG+R+ G++++PTVF GV
Sbjct: 299 GDPLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGV 358
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462 |
| >gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 443 bits (1142), Expect = e-153
Identities = 186/370 (50%), Positives = 239/370 (64%), Gaps = 8/370 (2%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+LLI+G++VD AS T ++P TG+VI V AEDV+ AV+AAR AF+ W R++
Sbjct: 1 YKLLIDGEWVDGAS--TIEVINPATGEVIATVPAATAEDVDAAVAAARAAFE--AWSRLS 56
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A ER+ I+ R ADLLE +E+AAL T + GKP + A+ E+ RYYA A +++
Sbjct: 57 AEERAAILRRIADLLEARAEELAALITLETGKPISE-ARGEIARAADFIRYYAEEARRLE 115
Query: 186 GLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
G T P D EP+GV G I PWNFPL + AWK+ PALA GNT+VLK +EQTPLS
Sbjct: 116 GETIPTDKGSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLS 175
Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
AL +++L EAGLP GVLN+V+G G G AL +H +VD ++FTGST G+ + AA
Sbjct: 176 ALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAA- 234
Query: 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365
NLKPVTLELGGKSP IV EDAD+D A + A + FFN GQ C A SR VHESVYD+FVE
Sbjct: 235 NLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVE 294
Query: 366 KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYY 425
+ A A VGDP GP I EQ +++ YI V GA+L GG+R G GY+
Sbjct: 295 RLVARAASLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRPG--GYF 352
Query: 426 IKPTVFTGVK 435
++PT+ GV
Sbjct: 353 VEPTILEGVT 362
|
Length = 472 |
| >gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 443 bits (1141), Expect = e-153
Identities = 167/370 (45%), Positives = 235/370 (63%), Gaps = 6/370 (1%)
Query: 70 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYER 129
I+G++V++ASGKT ++P G+VI V EG AED RA++AAR+AFD G WP + A ER
Sbjct: 2 IDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQER 61
Query: 130 SKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA 189
+ ++ R AD + +E+A LET + GK +S + ++ FRYYAG A K G
Sbjct: 62 AALLFRIADKIREDAEELARLETLNTGKTLRES-EIDIDDVANCFRYYAGLATKETGEVY 120
Query: 190 PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 249
+T+ EP+GV G I PWN+PLL AWK+ PALA GNT+V+K +E TPL+ + +
Sbjct: 121 DVPPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIAL 180
Query: 250 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKP 309
+L+ EAGLP GV+N+V+G G T GA LA +VD ++FTG T TG+ +++ AA N+K
Sbjct: 181 FELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAG-NVKK 239
Query: 310 VTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANA 369
V LELGGK+P IV DAD + A + A +FFN GQ C AGSR V ES++D+FV
Sbjct: 240 VALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAE 299
Query: 370 LAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYY 425
A K +G+ + GP + +E EK+L YI+ G + GA+L GG+R AKGY+
Sbjct: 300 RAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYF 359
Query: 426 IKPTVFTGVK 435
++PT+F V
Sbjct: 360 VEPTIFDDVD 369
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482 |
| >gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 437 bits (1126), Expect = e-151
Identities = 169/332 (50%), Positives = 215/332 (64%), Gaps = 6/332 (1%)
Query: 106 NRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165
+ AV+AAR AF W + ER+ I+ + ADLLE +E+AALET + GKP + A
Sbjct: 1 DAAVAAARAAFKA--WAALPPAERAAILRKLADLLEERREELAALETLETGKP-IEEALG 57
Query: 166 EVPMTTRLFRYYAGWADKIQGLTAPADGPYHV-QTLHEPIGVAGQIIPWNFPLLMFAWKV 224
EV FRYYAG A ++ G P+ P + EP+GV G I PWNFPLL+ AWK+
Sbjct: 58 EVARAADTFRYYAGLARRLHGEVIPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKL 117
Query: 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVD 284
PALA GNT+VLK +E TPL+AL +++LL EAGLPPGVLN+V+G G GAALASH VD
Sbjct: 118 APALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVTGDGDEVGAALASHPRVD 177
Query: 285 KLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 344
K++FTGST GK +++ AA+ NLK VTLELGGKSP IV +DAD+D A + A + F N G
Sbjct: 178 KISFTGSTAVGKAIMRAAAE-NLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAG 236
Query: 345 QCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 404
Q C A SR VHES+YD+FVE+ VG+P GP I + Q +++L YI
Sbjct: 237 QVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIED 296
Query: 405 GVDGGAKLETGGERL-GAKGYYIKPTVFTGVK 435
GAKL GG+RL G KGY++ PTV T V
Sbjct: 297 AKAEGAKLLCGGKRLEGGKGYFVPPTVLTDVD 328
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432 |
| >gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Score = 434 bits (1118), Expect = e-150
Identities = 172/357 (48%), Positives = 220/357 (61%), Gaps = 9/357 (2%)
Query: 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
+++P TG+ V E A DV+RAV+AAR AF+ G W ++T ER K++ R ADL+E +
Sbjct: 1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANA 60
Query: 145 DEIAALETWDNGKPF-EQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHE 202
+E+A LET DNGK E AQ V +RYYAG ADKI+G P D G Y T E
Sbjct: 61 EELAELETRDNGKLIRETRAQ--VRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRRE 118
Query: 203 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGV 262
P+GV I PWN PLL+ A K+ PALA GNT+VLK +E TP S L ++KL EAG PPGV
Sbjct: 119 PLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAEEAGFPPGV 178
Query: 263 LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 322
+N+V+G+GP G AL H V K+AFTG T TG+ + + AA+ NL PVTLELGGKSP IV
Sbjct: 179 VNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAE-NLAPVTLELGGKSPNIV 237
Query: 323 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 382
+DAD+D A +F GQ C AGSR V S+YD+FVE+ A A VGDP
Sbjct: 238 FDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDP 297
Query: 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVK 435
Q GP Q EK+ +Y+ + GA++ TGGER GY+ +PT+ V
Sbjct: 298 ETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVT 354
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457 |
| >gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 428 bits (1101), Expect = e-147
Identities = 181/351 (51%), Positives = 240/351 (68%), Gaps = 3/351 (0%)
Query: 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
TL+P TG++I VA+ AEDV+ AV+AAR AF+ W M ER +I+ R A+L+ +
Sbjct: 1 TLNPATGELIARVAQASAEDVDAAVAAARAAFE--AWSAMDPAERGRILWRLAELILANA 58
Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPI 204
DE+A LE+ D GKP + + +VP FRYYAGWADKI+G P GP+ T+ EP+
Sbjct: 59 DELARLESLDTGKPIRAARRLDVPRAADTFRYYAGWADKIEGEVIPVRGPFLNYTVREPV 118
Query: 205 GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLN 264
GV G I+PWNFPL+ AWKV PALA GNT+VLK AE TPLSAL +++L+ EAG P GVLN
Sbjct: 119 GVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEAGFPAGVLN 178
Query: 265 IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324
+V+G+G AGAAL H +VDK+ FTGST G+ ++Q A NLK V+LELGGKS IV
Sbjct: 179 VVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQ-GAAGNLKRVSLELGGKSANIVFA 237
Query: 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384
DAD+D A A +F+NQGQ C AGSR VHES+YD+F+E+ +LA GDP
Sbjct: 238 DADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKT 297
Query: 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVK 435
Q GP + QF+++L Y+ G + GA+L TGG+R GA+G++++PT+F V
Sbjct: 298 QMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEPTIFAAVP 348
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453 |
| >gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Score = 411 bits (1060), Expect = e-141
Identities = 161/355 (45%), Positives = 228/355 (64%), Gaps = 7/355 (1%)
Query: 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
+P TG+V+ V EG A +V+ AV+AA++AF W RM+ ER++I+ + ADL+E
Sbjct: 1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFPG--WSRMSPAERARILHKVADLIEARA 58
Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPI 204
DE+A LE+ D GKP + ++P FR++A + ++ G + P DG L +P+
Sbjct: 59 DELALLESLDTGKPITLARTRDIPRAAANFRFFADYILQLDGESYPQDGGALNYVLRQPV 118
Query: 205 GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLN 264
GVAG I PWN PL++ WK+ PALA GNT+VLK +E TPL+A +++L +EAGLPPGV+N
Sbjct: 119 GVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELANEAGLPPGVVN 178
Query: 265 IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324
+V G+GP AGAAL +H +VD ++FTG T TG+ +++ AA NLKPV+LELGGK+P IV
Sbjct: 179 VVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAP-NLKPVSLELGGKNPNIVFA 237
Query: 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384
DAD+D+A + A + F N G+ C AGSR V S+YD+F+E+ A VGDP
Sbjct: 238 DADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDT 297
Query: 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVK 435
+ GP I E EK+L Y+ GA + TGG R GY+++PTV TG+
Sbjct: 298 EVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLD 352
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455 |
| >gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Score = 406 bits (1044), Expect = e-138
Identities = 172/373 (46%), Positives = 241/373 (64%), Gaps = 4/373 (1%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
QL ING+FVD+ GKT+ T++P G VI V+ EDV+RAV+AA++AF+ G W +M
Sbjct: 6 HQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMN 65
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A +R +++ R ADL+E H +E+A +E+ D+G + + +T V M+ + FRY+AGW DKIQ
Sbjct: 66 ARDRGRLMYRLADLMEEHQEELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQ 125
Query: 186 GLTAPADG--PYHVQTL--HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
G T P + P TL EPIGV G +IPWN+PL+M AWK+ LA GNT+VLK A+
Sbjct: 126 GKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQV 185
Query: 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
TPL+AL ++L +AG P GV+NI+ G G G L+ H +V KL FTGST GK +++
Sbjct: 186 TPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKS 245
Query: 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
A SNLK V+LELGGKSP I+ D D+DKA + ++FFN+G+ C A R FV ES++D
Sbjct: 246 CAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHD 305
Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 421
+FV + K +GDP GPQ +K+++Y GV GA L GG+++
Sbjct: 306 EFVRRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDR 365
Query: 422 KGYYIKPTVFTGV 434
G++ +PTVFT V
Sbjct: 366 PGFFFEPTVFTDV 378
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486 |
| >gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Score = 404 bits (1040), Expect = e-138
Identities = 168/377 (44%), Positives = 227/377 (60%), Gaps = 13/377 (3%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
ING++V + G+ F +P G V+ + AEDV+ AV AA +AF W + +
Sbjct: 2 DNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFKT--WGKTSV 59
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
ER+ I+ + AD +E + + +A ET DNGKP ++ ++P+ FRY+AG +G
Sbjct: 60 AERANILNKIADRIEENLELLAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEG 119
Query: 187 LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
+ D HEP+GV GQIIPWNFPLLM AWK+ PALA GNT+VLK A QTPLS
Sbjct: 120 SLSEIDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSI 179
Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306
L + +L+ + LP GV+N+V+G+G AG LASH + KLAFTGSTT G++++Q AA+ N
Sbjct: 180 LVLMELIGDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAE-N 237
Query: 307 LKPVTLELGGKSPFIVCEDA-----DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
L PVTLELGGKSP I +DA D D AE FNQG+ C SR V ES+YD
Sbjct: 238 LIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYD 297
Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL-- 419
+F+E+A VG+P G Q+ +Q EKIL Y+ G + GA++ TGGERL
Sbjct: 298 EFIERAVERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTL 357
Query: 420 --GAKGYYIKPTVFTGV 434
KGY+ +PT+ G
Sbjct: 358 GGLDKGYFYEPTLIKGG 374
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480 |
| >gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Score = 394 bits (1014), Expect = e-134
Identities = 160/352 (45%), Positives = 213/352 (60%), Gaps = 7/352 (1%)
Query: 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145
DP TG+V +A G A DV+RAV AAR+AF E W R++ ER +++LR A L+ H D
Sbjct: 2 FDPSTGEVFARIARGGAADVDRAVQAARRAF-ESGWLRLSPAERGRLLLRIARLIREHAD 60
Query: 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIG 205
E+A LE+ D GKP Q A+ +V R F YY G ADK+ G T P Y V T+ EP G
Sbjct: 61 ELARLESLDTGKPLTQ-ARADVEAAARYFEYYGGAADKLHGETIPLGPGYFVYTVREPHG 119
Query: 206 VAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNI 265
V G IIPWN+PL + V PALA GN +V+K AE PL+AL +++L EAGLP G LN+
Sbjct: 120 VTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEEAGLPAGALNV 179
Query: 266 VSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED 325
V+G G AGAAL +H VD ++FTGS TG V++ AA+ N+ PVTLELGGKSP IV D
Sbjct: 180 VTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAE-NVVPVTLELGGKSPQIVFAD 238
Query: 326 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 385
AD++ A + A+ N GQ C AGSR VH S+YD+ +E+ VG P
Sbjct: 239 ADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVG-PGLEDPD 297
Query: 386 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL---GAKGYYIKPTVFTGV 434
GP I ++Q +++ ++ GA++ GG A GY++ PT+ V
Sbjct: 298 LGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDV 349
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454 |
| >gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Score = 382 bits (985), Expect = e-130
Identities = 153/350 (43%), Positives = 211/350 (60%), Gaps = 5/350 (1%)
Query: 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145
++P TG+VI V + A D + A+ AA AF W + TA ER+ I+ R+ADL+ +
Sbjct: 2 INPATGEVIGEVPDAGAADADAAIDAAAAAFKT--WRKTTARERAAILRRWADLIRERAE 59
Query: 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYH-VQTLHEPI 204
++A L T + GKP + A+ EV ++A A +I G T P+ P + + +P+
Sbjct: 60 DLARLLTLEQGKPLAE-ARGEVDYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPV 118
Query: 205 GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLN 264
GV I PWNFP M K+ PALA G T+VLK AE+TPLSAL +++L EAGLP GVLN
Sbjct: 119 GVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSALALAELAEEAGLPAGVLN 178
Query: 265 IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324
+V+G G AL + V K++FTGST GK+++ AA +K V+LELGG +PFIV +
Sbjct: 179 VVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAA-DTVKRVSLELGGNAPFIVFD 237
Query: 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384
DAD+DKA + A + F N GQ C +R +VHES+YD+FVEK K VG+ G
Sbjct: 238 DADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGT 297
Query: 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGV 434
GP I+ EK+ + V GAK+ TGG+RLG GY+ +PTV T V
Sbjct: 298 DMGPLINERAVEKVEALVEDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDV 347
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451 |
| >gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 378 bits (972), Expect = e-127
Identities = 156/372 (41%), Positives = 220/372 (59%), Gaps = 8/372 (2%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
L I+G +V++ SG+TF ++P TG+V+ V DV AV++A++ W MTA
Sbjct: 8 SLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQKI--WAAMTA 65
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
ERS+I+ R D+L NDE+AALET D GKP ++++ ++ + YYAG A ++G
Sbjct: 66 MERSRILRRAVDILRERNDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEG 125
Query: 187 LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
P G V T EP+GV I WN+P+ + WK PALA GN ++ K +E TPL+A
Sbjct: 126 EQIPLRGGSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTA 185
Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306
L ++++ EAGLP GV N+V G G GA L H ++ K++FTG TGK V+ AA S
Sbjct: 186 LKLAEIYTEAGLPDGVFNVVQGDGRV-GAWLTEHPDIAKVSFTGGVPTGKKVMAAAAAS- 243
Query: 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 366
LK VT+ELGGKSP IV +DAD+D+AA++A A F++ GQ C G+R FV +S+ F +
Sbjct: 244 LKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEAR 303
Query: 367 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL----GAK 422
+ +GDP GP + +K+L YI G GA+L GGERL A
Sbjct: 304 LLERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFAN 363
Query: 423 GYYIKPTVFTGV 434
G ++ PTVFT
Sbjct: 364 GAFVAPTVFTDC 375
|
Length = 488 |
| >gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 376 bits (968), Expect = e-127
Identities = 158/368 (42%), Positives = 221/368 (60%), Gaps = 6/368 (1%)
Query: 70 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYER 129
ING+FV S+SG+T L+P TG+V+ V AED +RAV AA A W R+ A ER
Sbjct: 2 INGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQKA--WERLPAIER 59
Query: 130 SKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA 189
+ + + ADL+ + DE+A L + GK A+ EV T Y A WA +I+G
Sbjct: 60 AAYLRKLADLIRENADELAKLIVEEQGKTLSL-ARVEVEFTADYIDYMAEWARRIEGEII 118
Query: 190 PADGPY-HVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 248
P+D P ++ PIGV I+PWNFP + A K+ PAL GNTIV+K +E+TPL+AL
Sbjct: 119 PSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNALE 178
Query: 249 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLK 308
++L+ EAGLP GVLNIV+G G G AL +H +V ++ TGST G+ +++ AA+ N+
Sbjct: 179 FAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAE-NIT 237
Query: 309 PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKAN 368
V+LELGGK+P IV +DAD+D A + + N GQ C R +VHE +YD+F+EK
Sbjct: 238 KVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLV 297
Query: 369 ALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL-GAKGYYIK 427
VGDPF GP ++ +K+ + + V+ GA L TGG+R G KGY+ +
Sbjct: 298 EKMKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYE 357
Query: 428 PTVFTGVK 435
PTV T V+
Sbjct: 358 PTVLTNVR 365
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468 |
| >gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Score = 374 bits (962), Expect = e-126
Identities = 153/372 (41%), Positives = 209/372 (56%), Gaps = 12/372 (3%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
I+G +V A +T ++P T +VI V G A DV+RAV+AAR+AF W +
Sbjct: 1 FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFP--AWSATSVE 58
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
ER+ ++ R A+ E DE+A T + G P + +V + R A +
Sbjct: 59 ERAALLERIAEAYEARADELAQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFE 118
Query: 188 TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247
G V + EPIGV G I PWN+PL KV PALA G T+VLK +E PLSA+
Sbjct: 119 ERR--GNSLV--VREPIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSAI 174
Query: 248 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 307
++++L EAGLP GV N+V+G GP G AL++H +VD ++FTGST GK V + AA + +
Sbjct: 175 ILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAADT-V 233
Query: 308 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 367
K V LELGGKS I+ +DAD++KA A F N GQ C A +R V S Y + E A
Sbjct: 234 KRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIA 293
Query: 368 NALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG----ERLGAKG 423
A A VVGDP GP + QF+++ YI+ G++ GA+L GG E L +G
Sbjct: 294 AAAAEAYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGL-ERG 352
Query: 424 YYIKPTVFTGVK 435
Y++KPTVF V
Sbjct: 353 YFVKPTVFADVT 364
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466 |
| >gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 372 bits (958), Expect = e-125
Identities = 153/372 (41%), Positives = 217/372 (58%), Gaps = 7/372 (1%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
T+LLING+ V G+ P +P TG+V+ +AE A V+ AV+AA AF E W + T
Sbjct: 3 TKLLINGELVAG-EGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFPE--WSQTT 59
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
ER++ +L+ AD +E + DE A LE+ + GKP + E+P +FR++AG A ++
Sbjct: 60 PKERAEALLKLADAIEENADEFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLE 119
Query: 186 GLTAPADGPYHVQTLH-EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G A H + +P+GV I PWN+PL+M AWK+ PALA GNT+VLK +E TPL
Sbjct: 120 GKAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSEITPL 179
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
+AL +++L + LPPGVLN+V+G G T G AL H +V ++ TGS TGK VL AA
Sbjct: 180 TALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAAD 238
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
S +K LELGGK+P IV +DAD+D E ++N GQ C A R + +YD V
Sbjct: 239 S-VKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLV 297
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI-RSGVDGGAKLETGGERLGAKG 423
K A VGDP + GP I + +++ ++ R+ G ++ TGGE KG
Sbjct: 298 AKLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKG 357
Query: 424 YYIKPTVFTGVK 435
YY +PT+ G +
Sbjct: 358 YYYEPTLLAGAR 369
|
Length = 475 |
| >gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 372 bits (957), Expect = e-125
Identities = 164/372 (44%), Positives = 229/372 (61%), Gaps = 8/372 (2%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
L ING++V +SG+T + +P G+ ++ + + DV+RAV AA++AF W + T
Sbjct: 2 GLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFKT--WRKTTV 59
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
ER+ I+ + AD+++ + + +A +ET DNGKP ++ ++P+ FRY+AG +G
Sbjct: 60 AERANILNKIADIIDENKELLAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEG 119
Query: 187 LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
D L EPIGV GQIIPWNFP LM AWK+ PALA GNT+V+K + T LS
Sbjct: 120 SANMIDEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSL 179
Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306
L ++K++ + LP GV+NIV+G G +G L +H +DKLAFTGST G+ V AAK
Sbjct: 180 LELAKIIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAK-K 237
Query: 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 366
L P TLELGGKS I+ +DA+ DKA E A + FNQGQ CCAGSR FV E +YD+FV K
Sbjct: 238 LIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAK 297
Query: 367 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AK 422
VG+P Q G Q++ +Q +KIL Y+ + GAK+ TGG RL K
Sbjct: 298 LKEKFENVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDK 357
Query: 423 GYYIKPTVFTGV 434
G++I+PT+ V
Sbjct: 358 GFFIEPTLIVNV 369
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475 |
| >gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Score = 363 bits (933), Expect = e-122
Identities = 163/350 (46%), Positives = 220/350 (62%), Gaps = 4/350 (1%)
Query: 88 PRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI 147
P G V+ AEG EDV+ AV+AARKAFD+GPWPRM+ ER+ ++L+ ADL+ + +
Sbjct: 4 PAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERL 63
Query: 148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQ-TLHEPIGV 206
A +ET ++GKP Q A+ E+ L+RY A A + G + G + L EPIGV
Sbjct: 64 ALIETLESGKPISQ-ARGEIEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIGV 122
Query: 207 AGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIV 266
G I PWNFP L+ + K+ ALA G T+V+K +E T + L +++LL EAGLP GV+NIV
Sbjct: 123 VGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLIEAGLPAGVVNIV 182
Query: 267 SGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDA 326
+GYG T G A+ H +VD ++FTGST GK + AA+ NLK V+LELGGK+P IV DA
Sbjct: 183 TGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAAR-NLKKVSLELGGKNPQIVFADA 241
Query: 327 DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQ 386
D+D AA+ + ++FN G+CC +GSR VHES+ D FV A + K VGDP +
Sbjct: 242 DLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKV 301
Query: 387 GPQIDSEQFEKILKYIRSGVDGGAKLETGGERL-GAKGYYIKPTVFTGVK 435
G I+ Q KI Y+ +G GA L GGERL A G + +PT+FT V
Sbjct: 302 GAIINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVT 351
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454 |
| >gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 363 bits (934), Expect = e-122
Identities = 152/372 (40%), Positives = 203/372 (54%), Gaps = 9/372 (2%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
L I G++V + +T + P T +V+ V E DV+ AV+AAR+AFD GPWPR++
Sbjct: 1 LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPA 60
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK---I 184
ER+ ++ R AD LE DE+A L T +NG P S + + P L RYYA A
Sbjct: 61 ERAAVLRRLADALEARADELARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFE 120
Query: 185 QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
+ G V EP+GV I+PWN PL + A K+ PALA G T+VLK + +TPL
Sbjct: 121 ERRPGSGGGHVLV--RREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPL 178
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
A +++ EAGLPPGV+N+V G L H VDK++FTGST G+ + +
Sbjct: 179 DAYLLAEAAEEAGLPPGVVNVVPA-DREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCG- 236
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
L VTLELGGKS IV +DAD+D A A N GQ C A +R V S YD+ V
Sbjct: 237 ERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVV 296
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA--K 422
E A VGDP Q GP + Q E++ YI G GA+L TGG R +
Sbjct: 297 EALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDR 356
Query: 423 GYYIKPTVFTGV 434
G++++PT+F V
Sbjct: 357 GWFVEPTLFADV 368
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471 |
| >gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Score = 360 bits (927), Expect = e-121
Identities = 164/358 (45%), Positives = 221/358 (61%), Gaps = 10/358 (2%)
Query: 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
++P T I + AEDV+ AV AAR+AF W + T ER+K + A+ +
Sbjct: 1 VINPATEATIGEIPAATAEDVDAAVRAARRAFPR--WKKTTGAERAKYLRAIAEGVRERR 58
Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA----DGPYHVQTL 200
+E+A LE DNGKP ++ A +V F YYA A+++ A + +
Sbjct: 59 EELAELEARDNGKPLDE-AAWDVDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVR 117
Query: 201 HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPP 260
EP+GV G I PWNFPLLM AWKV PALA G T+VLK +E T L+ L ++++ EAGLPP
Sbjct: 118 REPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELELAEIAAEAGLPP 177
Query: 261 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPF 320
GVLN+V+G G AGA LA+H +DK++FTGST TG V+Q AA+ ++KPV+LELGGKSP
Sbjct: 178 GVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQ-DIKPVSLELGGKSPI 236
Query: 321 IVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380
IV +DAD++KA E A + F+N GQ C A SR VHES+ D F+E+ A VGDP
Sbjct: 237 IVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPL 296
Query: 381 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER--LGAKGYYIKPTVFTGVKV 436
+ G++ GP + Q+EK+L +I G + GA+L GG R KGY+I PTVF V
Sbjct: 297 EEGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPT 354
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456 |
| >gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Score = 360 bits (926), Expect = e-121
Identities = 156/355 (43%), Positives = 205/355 (57%), Gaps = 10/355 (2%)
Query: 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
++P TG+V+ V AEDV+ AV +A+ A E W + ER +I+ + ADLL N
Sbjct: 1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQKE--WSATSGMERGRILRKAADLLRERN 58
Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPI 204
DEIA LET DNGKP E A+ ++ + YYAG A + G P G T EP+
Sbjct: 59 DEIARLETIDNGKPIE-EARVDIDSSADCLEYYAGLAPTLSGEHVPLPGGSFAYTRREPL 117
Query: 205 GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLN 264
GV I WN+P+ + +WK PALACGN +V K + TPL+AL ++++L EAGLP GV N
Sbjct: 118 GVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALLLAEILTEAGLPDGVFN 177
Query: 265 IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324
+V G G T G L H +V K++FTGS TGK V+ AAK +K VTLELGGKSP I+ +
Sbjct: 178 VVQGGGET-GQLLCEHPDVAKVSFTGSVPTGKKVMSAAAK-GIKHVTLELGGKSPLIIFD 235
Query: 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384
DAD++ A A A F +QGQ C G+R FV S+ D+F E+ K +GDP
Sbjct: 236 DADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDT 295
Query: 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-----AKGYYIKPTVFTGV 434
Q G I E EK+L YI S GAK+ GGER+ G+Y+ P V T
Sbjct: 296 QMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDC 350
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457 |
| >gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Score = 359 bits (924), Expect = e-120
Identities = 158/370 (42%), Positives = 212/370 (57%), Gaps = 10/370 (2%)
Query: 69 LINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
I+G++V G+ +P T DV+ A AED + A++AA AF W R +
Sbjct: 4 YIDGEWVAGGDGE--ENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFPA--WRRTSPE 59
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
R+ I+ + D LE +E+A L T + GK + A+ EV ++FRYYAG A ++ G
Sbjct: 60 ARADILDKAGDELEARKEELARLLTREEGKTLPE-ARGEVTRAGQIFRYYAGEALRLSGE 118
Query: 188 TAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
T P+ P V+T EP+GV G I PWNFP+ + AWK+ PALA GNT+V K AE TP SA
Sbjct: 119 TLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASA 178
Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306
+ ++L EAGLP GV N+V G G G AL H +VD ++FTGST G+ + AA +
Sbjct: 179 WALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAA-AR 237
Query: 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 366
V LE+GGK+P +V +DAD+D A E A FF+ GQ C A SR V E ++D+FVE
Sbjct: 238 GARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEA 297
Query: 367 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL--GAKGY 424
VGD G+ GP + Q EK L+YI GAKL GGERL +GY
Sbjct: 298 LVERTKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGY 357
Query: 425 YIKPTVFTGV 434
Y+ P +F GV
Sbjct: 358 YLAPALFAGV 367
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473 |
| >gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Score = 356 bits (915), Expect = e-119
Identities = 167/367 (45%), Positives = 230/367 (62%), Gaps = 14/367 (3%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
ING++V + K+FPT++P TG+V+ V + E EDV+ AV+AAR AF+ W + +
Sbjct: 24 HFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFES--WSALPGH 81
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
R++ + R A +++H A LE+ DNGKP +S ++P+ R F ++AGWA +
Sbjct: 82 VRARHLYRIARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLD-- 139
Query: 188 TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247
T A +P+GV GQI+PWNFPLLM AWK+ PALA GNT+VLK AE TPL+AL
Sbjct: 140 TELAG--------WKPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTAL 191
Query: 248 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 307
+++ EAGLPPGVLNIV+G G G+ALA+H VDK+AFTGST G+ + + A +
Sbjct: 192 LFAEICAEAGLPPGVLNIVTGNGSF-GSALANHPGVDKVAFTGSTEVGRALRRATAGTG- 249
Query: 308 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 367
K ++LELGGKSPFIV +DAD+D A E A++FNQGQ CCAGSR V ESV ++ + K
Sbjct: 250 KKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKL 309
Query: 368 NALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIK 427
VGDP I G +D Q ++I + + G GA + G L +KG +
Sbjct: 310 KERMSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYP 369
Query: 428 PTVFTGV 434
PT+FT V
Sbjct: 370 PTLFTNV 376
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480 |
| >gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 355 bits (912), Expect = e-119
Identities = 150/369 (40%), Positives = 221/369 (59%), Gaps = 7/369 (1%)
Query: 70 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYER 129
I+G++V+ ++G T ++P G+VI V EDV RA++AAR+A E W M+ ER
Sbjct: 2 IDGEYVEDSAGTTREIINPANGEVIATVHAATPEDVERAIAAARRAQGE--WAAMSPMER 59
Query: 130 SKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA 189
+I+ R ADL+ N+E+A LET D GK +++ ++ +F ++AG A + G
Sbjct: 60 GRILRRAADLIRERNEELAKLETLDTGKTLQETIVADMDSGADVFEFFAGLAPALNGEII 119
Query: 190 PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 249
P GP T+ EP+GV I WN+PL + +WK+ PALA GN +V K +E TPL+AL V
Sbjct: 120 PLGGPSFAYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSENTPLTALKV 179
Query: 250 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKP 309
++++ EAGLP GV N+V G G G L +H +V K++FTG TGK ++ AA +LK
Sbjct: 180 AEIMEEAGLPKGVFNVVQGDGAEVGPLLVNHPDVAKVSFTGGVPTGKKIMA-AAAGHLKH 238
Query: 310 VTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANA 369
VT+ELGGKSP IV +DAD++ A + A FF+ GQ C G+R FVH+ + ++F+ +
Sbjct: 239 VTMELGGKSPLIVFDDADLESAVDGAMLGNFFSAGQVCSNGTRVFVHKKIKERFLARLVE 298
Query: 370 LAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYY 425
+ +GDPF + GP I + +K+L YI G GA L TGG R G++
Sbjct: 299 RTERIKLGDPFDEATEMGPLISAAHRDKVLSYIEKGKAEGATLATGGGRPENVGLQNGFF 358
Query: 426 IKPTVFTGV 434
++PTVF
Sbjct: 359 VEPTVFADC 367
|
Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 350 bits (901), Expect = e-118
Identities = 144/257 (56%), Positives = 175/257 (68%), Gaps = 5/257 (1%)
Query: 111 AARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMT 170
AAR AF W + ER+ I+ + ADLLE +E+AALET + GKP + A EV
Sbjct: 2 AARAAFKA--WAALPPAERAAILRKIADLLEERREELAALETLETGKP-IEEALGEVARA 58
Query: 171 TRLFRYYAGWADKIQGLTAPADGPYHV-QTLHEPIGVAGQIIPWNFPLLMFAWKVGPALA 229
FRY AG ADK+ G P+ P EP+GV G I PWNFPLL+ AWK+ PALA
Sbjct: 59 IDTFRYAAGLADKLGGPELPSPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALA 118
Query: 230 CGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFT 289
GNT+VLK +E TPL+AL +++LL EAGLPPGV+N+V G G GAAL SH VDK++FT
Sbjct: 119 AGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDEVGAALLSHPRVDKISFT 178
Query: 290 GSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCA 349
GST GK +++ AA+ NLKPVTLELGGKSP IV EDAD+D A E A + FFN GQ C A
Sbjct: 179 GSTAVGKAIMKAAAE-NLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTA 237
Query: 350 GSRTFVHESVYDQFVEK 366
SR VHES+YD+FVEK
Sbjct: 238 ASRLLVHESIYDEFVEK 254
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Score = 352 bits (905), Expect = e-118
Identities = 155/351 (44%), Positives = 207/351 (58%), Gaps = 6/351 (1%)
Query: 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145
+DP TG+ I V + A DV+ AV+AA AF W R T ERSK +L+ AD +E + +
Sbjct: 2 VDPATGEEIATVPDASAADVDAAVAAAHAAFPS--WRRTTPAERSKALLKLADAIEENAE 59
Query: 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTL-HEPI 204
E+AALE+ + GKP E+P FR++AG A ++G A P H + EPI
Sbjct: 60 ELAALESRNTGKPLHLVRDDELPGAVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPI 119
Query: 205 GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLN 264
GV QI PWN+PL+M AWK+ PALA GNT+VLK +E TPL+ L +++L E LPPGV+N
Sbjct: 120 GVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLLLAELAAE-VLPPGVVN 178
Query: 265 IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324
+V G G +AG AL +H V ++ TGS TGK V + AA LK V LELGGK+P IV +
Sbjct: 179 VVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAAD-TLKRVHLELGGKAPVIVFD 237
Query: 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384
DAD+D A A ++N GQ C A R +VHESVYD+FV VGDP
Sbjct: 238 DADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDT 297
Query: 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVK 435
+ GP + Q E++ ++ A++ TGG R GY+ +PTV GV
Sbjct: 298 EMGPLNSAAQRERVAGFV-ERAPAHARVLTGGRRAEGPGYFYEPTVVAGVA 347
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450 |
| >gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Score = 350 bits (900), Expect = e-117
Identities = 144/358 (40%), Positives = 196/358 (54%), Gaps = 13/358 (3%)
Query: 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145
++P T +VI + A DV+ A++AAR+AFD G W A ER++ + + + LE +
Sbjct: 2 INPATEEVIGTAPDAGAADVDAAIAAARRAFDTGDW-STDAEERARCLRQLHEALEARKE 60
Query: 146 EIAALETWDNGKP--FEQSAQTEVPMTTRLFRYYAGWADKI---QGLTAPAD--GPYHVQ 198
E+ AL + G P ++ Q + P+ RY+A AD L PA GP
Sbjct: 61 ELRALLVAEVGAPVMTARAMQVDGPIGH--LRYFADLADSFPWEFDLPVPALRGGPGRRV 118
Query: 199 TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGL 258
EP+GV I PWNFP + K+ PALA GNT+VLK A TPLSAL + +++ E L
Sbjct: 119 VRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEIIAETDL 178
Query: 259 PPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS 318
P GV+N+V+G G AL + VD ++FTGST G+ ++ AA + LK V LELGGKS
Sbjct: 179 PAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAA-ATLKRVLLELGGKS 237
Query: 319 PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 378
IV +DAD+ AA A N GQ C +R V S YD+ VE A VGD
Sbjct: 238 ANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGD 297
Query: 379 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL--GAKGYYIKPTVFTGV 434
P G GP I + Q +++ YI G D GA+L TGG R KG+Y++PT+F V
Sbjct: 298 PADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADV 355
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459 |
| >gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 349 bits (897), Expect = e-116
Identities = 165/389 (42%), Positives = 223/389 (57%), Gaps = 15/389 (3%)
Query: 56 PITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKA 115
I P + QL I G++ + GK P ++P T + I + AEDV+ AV AARKA
Sbjct: 2 AIPVPRR----QLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKA 57
Query: 116 FDE---GPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTR 172
F W R T R+K + A + E+A LET D GKP +++A +
Sbjct: 58 FKRNKGKDWARTTGAVRAKYLRAIAAKITERKSELAKLETLDCGKPLDEAAWDMDDVAG- 116
Query: 173 LFRYYAGWADKIQGL-TAPADGP---YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 228
F YYA A+ + AP P + L EP+GV G I PWN+PLLM WKV PAL
Sbjct: 117 CFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLLMATWKVAPAL 176
Query: 229 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 288
A G T VLK +E ++ L ++ + E GLPPGVLN+V+G G AGA LASH VDK+AF
Sbjct: 177 AAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAF 236
Query: 289 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 348
TGST TG+ ++ AA+ +KPV+LELGGKSP IV +D D+DKA E A + F+ GQ C
Sbjct: 237 TGSTATGRKIMTAAAQ-MVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICS 295
Query: 349 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 408
A SR VHE + +F+EK A + DP + G + GP + Q+EK+LK+I +
Sbjct: 296 ATSRLLVHERIASEFLEKLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSE 355
Query: 409 GAKLETGGERLG--AKGYYIKPTVFTGVK 435
GA + GG+R KG++I+PT+ T V
Sbjct: 356 GATILCGGKRPEHLKKGFFIEPTIITDVT 384
|
Length = 503 |
| >gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 346 bits (889), Expect = e-115
Identities = 161/375 (42%), Positives = 217/375 (57%), Gaps = 17/375 (4%)
Query: 70 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYER 129
I G++V G+ F + P TG V V AED+ A+ AA A + W + + ER
Sbjct: 5 IGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKEA--WGKTSVAER 62
Query: 130 SKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA 189
+ I+ + AD +E + + +A ETWDNGKP ++ ++P+ FRY+AG +G +
Sbjct: 63 ANILNKIADRMEANLEMLAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSIS 122
Query: 190 PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 249
D HEP+GV GQIIPWNFPLLM WK+ PALA GN +VLK AEQTP S L +
Sbjct: 123 EIDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASILVL 182
Query: 250 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKP 309
+L+ + LPPGV+N+V+G+G AG LAS + K+AFTG TTTG++++Q A++ N+ P
Sbjct: 183 MELIGDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASE-NIIP 240
Query: 310 VTLELGGKSPFIVCE------DADVDKAAELAHYALF-FNQGQCCCAGSRTFVHESVYDQ 362
VTLELGGKSP I DA DKA E + +F NQG+ C SR + ES+YD+
Sbjct: 241 VTLELGGKSPNIFFADVMDADDAFFDKALE--GFVMFALNQGEVCTCPSRALIQESIYDR 298
Query: 363 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER---- 418
F+E+A G+P G Q EQ EKIL YI G + GA++ TGGER
Sbjct: 299 FMERALERVKAIKQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELG 358
Query: 419 LGAKGYYIKPTVFTG 433
G Y PT F G
Sbjct: 359 GLLGGGYYVPTTFKG 373
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479 |
| >gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 338 bits (869), Expect = e-112
Identities = 154/370 (41%), Positives = 217/370 (58%), Gaps = 3/370 (0%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+L ING++ +A +TF T+DP T + +A G++ D++RAVSAAR F+ G W +
Sbjct: 20 NRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSS 79
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
+R ++ + ADL+E H +E+A LET D GKP S + ++P R R+YA DK+
Sbjct: 80 PAKRKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVY 139
Query: 186 GLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
G A + EP+GV I+PWNFPLL+ WK+GPALA GN+++LK +E++PLS
Sbjct: 140 GEVATTSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLS 199
Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
A+ ++ L EAGLP GVLN+V+G+G AG AL+ H ++D +AFTGST TGK +L+ A S
Sbjct: 200 AIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDS 259
Query: 306 NLKPVTLELGGKSPFIVCEDA-DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
N+K V LE GGKS IV D D+ +AA +F+NQGQ C AG+R + ES+ D+F+
Sbjct: 260 NMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFL 319
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 424
A G P G ID + + +IR G G L G R
Sbjct: 320 ALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREGESKGQLLLDG--RNAGLAA 377
Query: 425 YIKPTVFTGV 434
I PT+F V
Sbjct: 378 AIGPTIFVDV 387
|
Length = 494 |
| >gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 337 bits (867), Expect = e-111
Identities = 157/375 (41%), Positives = 220/375 (58%), Gaps = 13/375 (3%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
I+G+FV S SG+TF TL P T +V+ VA G A DV+RA AA++AF W + A
Sbjct: 3 HFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFKR--WAELKAA 60
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA-DKIQG 186
ER + + + ADL+E+H DEIA LE D G+P Q+ Q +V FR++A + + G
Sbjct: 61 ERKRYLHKIADLIEQHADEIAVLECLDCGQPLRQTRQ-QVIRAAENFRFFADKCEEAMDG 119
Query: 187 LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
T P D + T+ P+G G I PWN P ++ WK+ PALA GNT+VLK AE +PL+A
Sbjct: 120 RTYPVDTHLNY-TVRVPVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPLTA 178
Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306
++++ EAGLP GV N+V G+G AG AL +H +V ++FTG T TG I+++ A +
Sbjct: 179 ARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGADT- 237
Query: 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 366
LK ++ELGGKSP IV +DAD+++A + + +F G+ C A SR V ES+ + FVEK
Sbjct: 238 LKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEK 297
Query: 367 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA----- 421
VG P + GP I E K+L Y+ + GA + GGER
Sbjct: 298 LVERVRAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGED 357
Query: 422 --KGYYIKPTVFTGV 434
+G Y+ PTVFTG
Sbjct: 358 LGRGNYVLPTVFTGA 372
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488 |
| >gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Score = 334 bits (859), Expect = e-111
Identities = 161/359 (44%), Positives = 216/359 (60%), Gaps = 12/359 (3%)
Query: 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
++P TG VI V A DV+RAV+AA+ AF W A ER K++ R AD LE +
Sbjct: 1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAF--PEWAATPARERGKLLARIADALEARS 58
Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQ-TLHEP 203
+E+A L + G A+ E + LFRY+ G A +++G T P GP + T+ EP
Sbjct: 59 EELARLLALETGNALRTQARPEAAVLADLFRYFGGLAGELKGETLPF-GPDVLTYTVREP 117
Query: 204 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVL 263
+GV G I+PWN PL++ A K+ PAL GNT+VLK AE PL+ L ++++L + LP GVL
Sbjct: 118 LGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILAQV-LPAGVL 176
Query: 264 NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 323
N+++GYG GAAL H +VDK+ FTGST GKI+ + AA L PV+LELGGKSP IV
Sbjct: 177 NVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAAD-RLIPVSLELGGKSPMIVF 235
Query: 324 EDADVDKAAELAHYAL-FFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 382
DAD+D A + A + F QGQ C AGSR FVHE +YD F+EK A K +GDP
Sbjct: 236 PDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDE 295
Query: 383 GIQQGPQIDSEQFEKILKYIRSGVDG-GAKLETGG----ERLGAKGYYIKPTVFTGVKV 436
G I +QF K+ YI G+ GA + GG E A G++++PT+F+GV
Sbjct: 296 ATDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDN 354
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457 |
| >gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Score = 330 bits (849), Expect = e-109
Identities = 147/353 (41%), Positives = 193/353 (54%), Gaps = 14/353 (3%)
Query: 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145
++P TG+V +++AV+AA+ AF W ER +L AD +E + +
Sbjct: 2 INPATGEVFASAPVASEAQLDQAVAAAKAAFPG--WSATPLEERRAALLAIADAIEANAE 59
Query: 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA--DKIQGLTAPADGPYHVQTLHEP 203
E+A L T + GKP + AQ EV RY A D++ V+ +P
Sbjct: 60 ELARLLTLEQGKPLAE-AQFEVGGAVAWLRYTASLDLPDEVIEDDDTR----RVELRRKP 114
Query: 204 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVL 263
+GV I+PWNFPLL+ AWK+ PAL GNT+VLK + TPL L + +L E LPPGVL
Sbjct: 115 LGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEV-LPPGVL 173
Query: 264 NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 323
N+VSG G G AL SH ++ K++FTGST TGK V+ AAK LK VTLELGG IV
Sbjct: 174 NVVSG-GDELGPALTSHPDIRKISFTGSTATGKKVMASAAK-TLKRVTLELGGNDAAIVL 231
Query: 324 EDADVDKAAE-LAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 382
D D+D A L A F N GQ C A R +VHES+YD+F E ALA VVGD
Sbjct: 232 PDVDIDAVAPKLFWGA-FINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDP 290
Query: 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVK 435
G GP + Q++K+ + + GAK+ GGE L GY+I PT+
Sbjct: 291 GTTLGPVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDPP 343
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446 |
| >gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Score = 330 bits (848), Expect = e-109
Identities = 162/372 (43%), Positives = 225/372 (60%), Gaps = 10/372 (2%)
Query: 69 LINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
I G++VDSASG+TF + +P +V+ A DV+ AV AAR+AF E W ++ A
Sbjct: 2 YIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFPE--WRKVPAP 59
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
R++ + R A+LL++ +E+A L T + GKP + + +V + +Y AG ++ G
Sbjct: 60 RRAEYLFRAAELLKKRKEELARLVTREMGKPLAE-GRGDVQEAIDMAQYAAGEGRRLFGE 118
Query: 188 TAPADGPYHVQ-TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
T P++ P T +PIGV I PWNFP+ + +WK+ PAL CGNT+V K AE TP A
Sbjct: 119 TVPSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPACA 178
Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306
L + +L EAGLPPGV+N+V G G G AL H +VD ++FTGST G+ + + A+ N
Sbjct: 179 LKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCARPN 238
Query: 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 366
K V LE+GGK+P IV +DAD+D A E A ++ F GQ C A SR VHESVYD+F+++
Sbjct: 239 -KRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKR 297
Query: 367 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL----GAK 422
A + VGD GP I+ Q EK+L Y G + GA L GGERL K
Sbjct: 298 FVERAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEK 357
Query: 423 GYYIKPTVFTGV 434
GY+++PTVFT V
Sbjct: 358 GYFVEPTVFTDV 369
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478 |
| >gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Score = 324 bits (831), Expect = e-106
Identities = 152/369 (41%), Positives = 209/369 (56%), Gaps = 9/369 (2%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
I+G+ V S K +P T VI VA DV+ AV++A +AF W + T
Sbjct: 2 HFIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFV-SAWAKTTPA 60
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
ER +I+LR ADL+E+H +E+A LET +GK S EV + RY+AGWA KI G
Sbjct: 61 ERGRILLRLADLIEQHGEELAQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGE 120
Query: 188 T------APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
T + Y T EP+GV I+PWNF +++ WK+G ALA G TIV+K +E
Sbjct: 121 TLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKPSEF 180
Query: 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
TPL+ L V++L EAG+P GVLN+V+G G GA L SH +V K++FTGS TGK + +
Sbjct: 181 TPLTLLRVAELAKEAGIPDGVLNVVNGKGAV-GAQLISHPDVAKVSFTGSVATGKKIGRQ 239
Query: 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
AA S+L VTLELGGK+ +DAD+D E A F +QGQ C A R +VH S +D
Sbjct: 240 AA-SDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFD 298
Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 421
+ V K VG P + GP + F+K+ Y+ G ++ GGE L
Sbjct: 299 ELVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAG 358
Query: 422 KGYYIKPTV 430
+GY+++PT+
Sbjct: 359 EGYFVQPTL 367
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477 |
| >gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 317 bits (813), Expect = e-103
Identities = 157/377 (41%), Positives = 224/377 (59%), Gaps = 5/377 (1%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
TQ LI G++ D+ GKTFP +P TG+VI +V + N A+++A AF W ++T
Sbjct: 25 TQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFP--SWSKLT 82
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A ERSKI+ R+ DL+ + +++A L T + GKP + A EV Y+A A ++
Sbjct: 83 ASERSKILRRWYDLIIANKEDLAQLMTLEQGKPL-KEAIGEVAYGASFLEYFAEEAKRVY 141
Query: 186 G-LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G + + L +P+GV G I PWNFPL M KVGPALA G T+V+K +E TPL
Sbjct: 142 GDIIPSPFPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPL 201
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
+AL ++L +AG+PPGVLN+V G P G AL + +V K+ FTGST GK ++ AA
Sbjct: 202 TALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAAA 261
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
+ +K V+LELGG +PFIV +DAD+D A + A + F N GQ C +R V E +YD+F
Sbjct: 262 T-VKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFA 320
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 424
E + K VVGD F+ G+ QGP I+ +K+ +++ V GAK+ GG+R G
Sbjct: 321 EAFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGT 380
Query: 425 YIKPTVFTGVKVLILIS 441
+ +PTV V +LI
Sbjct: 381 FYEPTVLGDVTEDMLIF 397
|
Length = 498 |
| >gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Score = 314 bits (807), Expect = e-102
Identities = 144/376 (38%), Positives = 200/376 (53%), Gaps = 14/376 (3%)
Query: 68 LLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
L+I G+ V + + + +P +V+ V + E+ AV AAR AF W R
Sbjct: 35 LVIGGKEVRT--EEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFPT--WRRTPP 90
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
ER++++LR A LL R E+AA + GK + + A +V YYA +++G
Sbjct: 91 EERARLLLRAAALLRRRRFELAAWMVLEVGKNWAE-ADADVAEAIDFLEYYAREMLRLRG 149
Query: 187 LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
+ ++ P+GV I PWNFPL + A AL GNT+VLK AE TP+ A
Sbjct: 150 FPVEMVPGEDNRYVYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIA 209
Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK-- 304
+ ++L EAGLPPGV+N + G G G L H +V +AFTGS G + + AAK
Sbjct: 210 AKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQ 269
Query: 305 ---SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
LK V E+GGK+ IV EDAD+D+AAE + F QGQ C A SR VHESVYD
Sbjct: 270 PGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYD 329
Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG- 420
+F+E+ VGDP + GP ID ++I +YI G G +L GGE L
Sbjct: 330 EFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKSEG-RLLLGGEVLEL 388
Query: 421 -AKGYYIKPTVFTGVK 435
A+GY+++PT+F V
Sbjct: 389 AAEGYFVQPTIFADVP 404
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512 |
| >gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Score = 310 bits (796), Expect = e-101
Identities = 144/355 (40%), Positives = 204/355 (57%), Gaps = 10/355 (2%)
Query: 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
++P TG V+ V A DV+RAV+AAR AF E W T ER++++ A L H
Sbjct: 1 VINPATGQVLARVPAASAADVDRAVAAARAAFPE--WRATTPLERARMLRELATRLREHA 58
Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPI 204
+E+A ++ D G P + +V + L Y+AG +++G T P G TL EP
Sbjct: 59 EELALIDALDCGNPV-SAMLGDVMVAAALLDYFAGLVTELKGETIPVGGRNLHYTLREPY 117
Query: 205 GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLN 264
GV +I+ +N PL+ A K+ LA GNT+V+K EQ PLSAL +++L E LPPGV N
Sbjct: 118 GVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELAREV-LPPGVFN 176
Query: 265 IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324
I+ G G TAGAAL H +V ++A GS TG+ +++ AA+ +K VTLELGGK+ IV
Sbjct: 177 ILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEG-IKHVTLELGGKNALIVFP 235
Query: 325 DADVDKAAELAHYALFFN-QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383
DAD + AA+ A + F GQ C + SR FVHES+YD+ + + VGDP
Sbjct: 236 DADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPA 295
Query: 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER----LGAKGYYIKPTVFTGV 434
GP + +Q+++++ YI S GA+L TGG R G+Y++PTVF V
Sbjct: 296 TTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADV 350
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456 |
| >gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 305 bits (785), Expect = e-100
Identities = 134/334 (40%), Positives = 183/334 (54%), Gaps = 9/334 (2%)
Query: 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163
DV+RA +AA A W ER+ I+ + A++LE DEIA ++G A
Sbjct: 1 DVDRAYAAAAAAQKA--WAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTR-PKA 57
Query: 164 QTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQ-TLHEPIGVAGQIIPWNFPLLMFAW 222
EV + R AG + +G P+D P P+GV G I P+NFPL++
Sbjct: 58 AFEVGAAIAILREAAGLPRRPEGEILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMR 117
Query: 223 KVGPALACGNTIVLKTAEQTPLS-ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHM 281
V PALA GN +VLK +TP++ L ++++ EAGLP GVLN+V G G G AL H
Sbjct: 118 SVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVLNVVPGGGSEIGDALVEHP 177
Query: 282 EVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 341
V ++FTGST G+ + +LA + +LK V LELGG +P IV +DAD+D A A + F
Sbjct: 178 RVRMISFTGSTAVGRHIGELAGR-HLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFL 236
Query: 342 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 401
+QGQ C A R VHESVYD+FVEK A A VGDP GP I+ Q +++
Sbjct: 237 HQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAI 296
Query: 402 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVK 435
+ V GA+L TGG +G + +PTV + V
Sbjct: 297 VEDAVAAGARLLTGGT---YEGLFYQPTVLSDVT 327
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431 |
| >gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 305 bits (783), Expect = 1e-99
Identities = 152/358 (42%), Positives = 204/358 (56%), Gaps = 14/358 (3%)
Query: 83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142
+ P G+VI V EDV +A++AA++ E + AYER++I+ R A LLE
Sbjct: 1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAKEMK--SLPAYERAEILERAAQLLEE 58
Query: 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQ---- 198
+E A + GKP + A+ EV R A A ++ G T P D +
Sbjct: 59 RREEFARTIALEAGKPIKD-ARKEVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIG 117
Query: 199 -TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG 257
T+ EPIGV I P+NFPL + A KVGPA+A GN +VLK A QTPLSAL +++LL EAG
Sbjct: 118 FTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLEAG 177
Query: 258 LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 317
LP G LN+V+G G T G AL + V ++FTGS G+ +A K+ LK VTLELG
Sbjct: 178 LPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEA---IARKAGLKKVTLELGSN 234
Query: 318 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 377
+ IV DAD++KA E F N GQ C + R FVHE +YD+F+E+ A K VVG
Sbjct: 235 AAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVG 294
Query: 378 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVK 435
DP GP I + E+I +++ V+GGA+L TGG+R GA ++PTV T V
Sbjct: 295 DPLDEDTDVGPMISEAEAERIEEWVEEAVEGGARLLTGGKRDGA---ILEPTVLTDVP 349
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453 |
| >gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 299 bits (767), Expect = 7e-97
Identities = 138/374 (36%), Positives = 197/374 (52%), Gaps = 13/374 (3%)
Query: 69 LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYE 128
+I G++V S G+TF + +P G+ I V EDV AV+AAR+AF E W ++ A
Sbjct: 2 VIGGEWVGSG-GETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFKE--WRKVPAPR 58
Query: 129 RSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT 188
R +I+ + + L + + + L + + GK EV + Y G + + GLT
Sbjct: 59 RGEIVRQIGEALRKKKEALGRLVSLEMGKIL-PEGLGEVQEMIDICDYAVGLSRMLYGLT 117
Query: 189 APADGPYHVQ-TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247
P++ P H P+GV G I +NFP+ + W AL CGNT+V K +E TPL+A+
Sbjct: 118 IPSERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLTAI 177
Query: 248 YVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303
V+K+L E GLPPGV+N+V+G G G L V ++FTGST G+ V + A
Sbjct: 178 AVTKILAEVLEKNGLPPGVVNLVTGGGD-GGELLVHDPRVPLVSFTGSTEVGRRVGETVA 236
Query: 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 363
+ V LELGG + IV +DAD+D A +A GQ C R VHESVYD+F
Sbjct: 237 RRF-GRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEF 295
Query: 364 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL--GA 421
+E+ + +GDP G GP I+ EK L I G + TGG+R+ G
Sbjct: 296 LERLVKAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGE 355
Query: 422 KGYYIKPTVFTGVK 435
G Y++PT+ TGV
Sbjct: 356 PGNYVEPTIVTGVT 369
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478 |
| >gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Score = 298 bits (764), Expect = 1e-96
Identities = 144/353 (40%), Positives = 200/353 (56%), Gaps = 8/353 (2%)
Query: 83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142
F L+P G V VA G +D RA++AA AF W T ER +I+L+ A+++ER
Sbjct: 1 FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAF--PAWAATTPSERERILLKAAEIMER 58
Query: 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQ-TLH 201
D++ L + G + A E T L R AG +++G T P+D P V ++
Sbjct: 59 RADDLIDLLIDEGGSTY-GKAWFETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVR 117
Query: 202 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPG 261
P+GV I P+N+PL++ KV ALA GNT+VLK +E+TP+ L +++++ EAGLP G
Sbjct: 118 RPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEAGLPKG 177
Query: 262 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321
V N+V+G G G L V + FTGST G+ + + A + +LK +TLELGGK+P I
Sbjct: 178 VFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGR-HLKKITLELGGKNPLI 236
Query: 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381
V DAD+D A A + F +QGQ C + SR V E VYD+FV+K A A K VGDP
Sbjct: 237 VLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRD 296
Query: 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGV 434
GP I Q E+I + + V GAKL TGG+ G + +PTV T V
Sbjct: 297 PDTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGKYDGN---FYQPTVLTDV 346
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451 |
| >gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 298 bits (764), Expect = 2e-96
Identities = 146/378 (38%), Positives = 206/378 (54%), Gaps = 18/378 (4%)
Query: 70 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYER 129
ING FV SGKTF ++P G VI V E A +V+ AV+AAR A +GPW +MT ER
Sbjct: 5 INGAFV--ESGKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAAL-KGPWGKMTVAER 61
Query: 130 SKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG--- 186
+ ++ AD +ER D+ A E D GKP ++ ++P FR +A
Sbjct: 62 ADLLYAVADEIERRFDDFLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECF 121
Query: 187 -LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
+ P + +P+GV G I PWN PLL+ WKVGPALACGNT+V+K +E+TP +
Sbjct: 122 EMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGT 181
Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGP-TAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
A + ++++ G+P GV N+V G+GP +AG L H VD + FTG T TG +++ AA
Sbjct: 182 ATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAAAD 241
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
+KPV+ ELGGK+ IV D D D A + F N GQ C R +V ++D+FV
Sbjct: 242 G-VKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFV 300
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG-------E 417
A A +G P GP I +E +K+L Y V+ GA + TGG
Sbjct: 301 AALKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDA 360
Query: 418 RLGAKGYYIKPTVFTGVK 435
A G +++PT++TG+
Sbjct: 361 L--AGGAWVQPTIWTGLP 376
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481 |
| >gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 291 bits (746), Expect = 5e-94
Identities = 138/357 (38%), Positives = 215/357 (60%), Gaps = 6/357 (1%)
Query: 87 DPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146
+P TG++I V + ++ A+ AA +AF W TA ERS ++ ++ +L+ + D+
Sbjct: 3 NPATGEIIGSVPDQGVDETEAAIRAAYEAFKT--WRATTAKERSSLLRKWYNLMMENKDD 60
Query: 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYH-VQTLHEPIG 205
+A L T +NGKP ++ A+ E+ ++A A ++ G T P+ + + +P+G
Sbjct: 61 LARLITLENGKPLKE-AKGEILYAASFLEWFAEEAKRVYGDTIPSPQSDKRLIVIKQPVG 119
Query: 206 VAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNI 265
V I PWNFP M K G ALA G T+V+K AEQTPLSAL +++L +AG+P GVLN+
Sbjct: 120 VCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQAGIPKGVLNV 179
Query: 266 VSG-YGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324
++G G L + V K++FTGST GKI+++ +A + +K V++ELGG +PFIV +
Sbjct: 180 ITGSRAKEVGNVLTTSPLVRKISFTGSTNVGKILMKQSAST-VKKVSMELGGNAPFIVFD 238
Query: 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384
DAD+D+A E A + F N GQ C +R +VH+ +YD+F +K K VG+ G+
Sbjct: 239 DADLDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGV 298
Query: 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILIS 441
QGP I+ + EK+ K+I V+ GAK+ TGG+R G + +PTV + V +L+S
Sbjct: 299 TQGPLINEKAVEKVEKHIADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTADMLVS 355
|
Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448 |
| >gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 290 bits (743), Expect = 2e-93
Identities = 143/355 (40%), Positives = 204/355 (57%), Gaps = 15/355 (4%)
Query: 83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142
+P G+VI V E+V A+ A KA D + AY+R KI+++ A+L+ER
Sbjct: 1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKDV--MSNLPAYKRYKILMKVAELIER 58
Query: 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADG-PYH----V 197
+E+A L T + GKP +QS + EV T RLF+ A A ++G T P D Y+
Sbjct: 59 RKEELAKLLTIEVGKPIKQS-RVEVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIA 117
Query: 198 QTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG 257
T+ EPIGV G I P+NFP +FA K+ PA+A GN++V+K + TPL+A+ ++K+L EAG
Sbjct: 118 FTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILEEAG 177
Query: 258 LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK--SNLKPVTLELG 315
LPPGV+N+V+GYG G + ++ +V+ ++FTGST G L +A+K K V LELG
Sbjct: 178 LPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVG---LLIASKAGGTGKKVALELG 234
Query: 316 GKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 375
G P IV +DAD+++A +A F N GQ C A R V E VYD+F++ K
Sbjct: 235 GSDPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLK 294
Query: 376 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTV 430
VGDP GP I E E++ + V+ G K+ GG+R G + PTV
Sbjct: 295 VGDPLDESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGKRDE--GSFFPPTV 347
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456 |
| >gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp | Back alignment and domain information |
|---|
Score = 279 bits (717), Expect = 1e-89
Identities = 135/353 (38%), Positives = 185/353 (52%), Gaps = 10/353 (2%)
Query: 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145
+P TG+V+ V + +V AV+ AR A W + R++ +LR+ L H D
Sbjct: 1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQRA--WAALGVEGRAQRLLRWKRALADHAD 58
Query: 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI---QGLTAPADGPYHVQTL-H 201
E+A L + GKP A EV + + A A ++ + + P T+ +
Sbjct: 59 ELAELLHAETGKPRA-DAGLEVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEY 117
Query: 202 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPG 261
P GV G I PWN+PLL + PALA GN +VLK +E TPL +++ AG P G
Sbjct: 118 RPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLVGELLAEAWAAAGPPQG 177
Query: 262 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321
VL +V+G G T GAAL VDK+AFTGS TG+ V+ AA+ L PV LELGGK P I
Sbjct: 178 VLQVVTGDGAT-GAALIDA-GVDKVAFTGSVATGRKVMAAAAE-RLIPVVLELGGKDPMI 234
Query: 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381
V DAD+++AA A + N GQ C + R +VHESVYD+FV + A A G
Sbjct: 235 VLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDI 294
Query: 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGV 434
G GP + Q + + +++ V GAK TGG R G + +PTV T V
Sbjct: 295 GDADIGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNGGGPFYEPTVLTDV 347
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453 |
| >gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 281 bits (721), Expect = 2e-89
Identities = 132/378 (34%), Positives = 194/378 (51%), Gaps = 20/378 (5%)
Query: 68 LLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
L+I G+ + + +++P +V+ V++ E +A+ AA +AF+ W + +
Sbjct: 39 LIIGGERITTE--DKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFET--WKKWSP 94
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA----GWAD 182
+R++I+LR A ++ R E +A + GKP+ + A + YYA AD
Sbjct: 95 EDRARILLRAAAIIRRRKHEFSAWLVKEAGKPWAE-ADADTAEAIDFLEYYARQMLKLAD 153
Query: 183 KIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242
+ P + H + + P+GV I PWNFP + A A+ GNT++LK A T
Sbjct: 154 GKPVESRPGE---HNRYFYIPLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDT 210
Query: 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
P+ A ++L EAGLP GV+N V G G G L H + + FTGS G + + A
Sbjct: 211 PVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERA 270
Query: 303 AKSN-----LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHE 357
AK LK V E+GGK +V EDAD+D AAE + F GQ C A SR VHE
Sbjct: 271 AKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHE 330
Query: 358 SVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE 417
VYD+ +EK L + VG+P GP I+ F+KI+ YI G + G +L GGE
Sbjct: 331 DVYDEVLEKVVELTKELTVGNPEDNA-YMGPVINQASFDKIMSYIEIGKEEG-RLVLGGE 388
Query: 418 RLGAKGYYIKPTVFTGVK 435
+KGY+I+PT+F V
Sbjct: 389 GDDSKGYFIQPTIFADVD 406
|
Length = 514 |
| >gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 273 bits (699), Expect = 7e-87
Identities = 143/368 (38%), Positives = 196/368 (53%), Gaps = 13/368 (3%)
Query: 72 GQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSK 131
G++ D S +T L+P TG+ + + EDV+ A AA A E W ER++
Sbjct: 1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQKE--WAATLPQERAE 58
Query: 132 IILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA 191
I+ + A +LE DEI ++G + A E + R A + +++G P+
Sbjct: 59 ILEKAAQILEERRDEIVEWLIRESGSTRIK-ANIEWGAAMAITREAATFPLRMEGRILPS 117
Query: 192 DGP---YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA-L 247
D P V EP+GV G I PWNFPL + V PALA GN +VLK A TP++ L
Sbjct: 118 DVPGKENRV--YREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPITGGL 175
Query: 248 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 307
++K+ EAGLP GVLN+V G G G A H ++FTGST G+ + +LA + +L
Sbjct: 176 LLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGR-HL 234
Query: 308 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 367
K V LELGG +PF+V EDAD+D A A + F +QGQ C A +R VHE VYD+FVEK
Sbjct: 235 KKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKF 294
Query: 368 NALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIK 427
GDP GP I+ Q + +L I V+ GA L GGE A+G ++
Sbjct: 295 VERVKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGE---AEGNVLE 351
Query: 428 PTVFTGVK 435
PTV + V
Sbjct: 352 PTVLSDVT 359
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465 |
| >gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Score = 271 bits (693), Expect = 9e-86
Identities = 141/369 (38%), Positives = 211/369 (57%), Gaps = 5/369 (1%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
Q LING+++D+ +G+ +P GD + V + A++ A+ AA +A W +TA
Sbjct: 12 QALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTA 69
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
ER+ I+ R+ +L+ H D++A L T + GKP + A+ E+ ++A +I G
Sbjct: 70 KERANILRRWFNLMMEHQDDLARLMTLEQGKPLAE-AKGEISYAASFIEWFAEEGKRIYG 128
Query: 187 LTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
T P + + +PIGV I PWNFP M K GPALA G T+VLK A QTP S
Sbjct: 129 DTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFS 188
Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
AL +++L AG+P GV N+V+G G L S+ V KL+FTGST G+ +++ AK
Sbjct: 189 ALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAK- 247
Query: 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365
++K V+LELGG +PFIV +DAD+DKA E A + F N GQ C +R +V + VYD+F E
Sbjct: 248 DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAE 307
Query: 366 KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYY 425
K K +GD + G+ GP ID + K+ ++I ++ GA++ GG+ G +
Sbjct: 308 KLQQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNF 367
Query: 426 IKPTVFTGV 434
+PT+ V
Sbjct: 368 FQPTILVDV 376
|
Length = 482 |
| >gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Score = 267 bits (684), Expect = 1e-84
Identities = 144/371 (38%), Positives = 203/371 (54%), Gaps = 7/371 (1%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
+LLING+ V G+ P +P TG+VI +AE AE V+ AV AA AF E W + T
Sbjct: 3 KLLINGELVS-GEGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFAE--WGQTTP 59
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
R++ +L+ AD++E + A LE+ + GKP E+P +FR++AG A + G
Sbjct: 60 KARAECLLKLADVIEENAQVFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSG 119
Query: 187 LTAPADGPYHVQTLH-EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
L A H + +P+GV I PWN+PL+M AWK+ PALA GN +VLK +E TPL+
Sbjct: 120 LAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLT 179
Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
AL +++L + P GV+NI+ G G T G L H +V ++ TGS TG+ +L A S
Sbjct: 180 ALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAPS 238
Query: 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365
+K +ELGGK+P IV +DAD+D E F+N GQ C A R + +YD VE
Sbjct: 239 -IKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVE 297
Query: 366 KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI-RSGVDGGAKLETGGERLGAKGY 424
K A G P + GP E+++K + + G K+ TGGE+ GY
Sbjct: 298 KLGAAVATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGY 357
Query: 425 YIKPTVFTGVK 435
Y PT+ G K
Sbjct: 358 YFAPTLLAGAK 368
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472 |
| >gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 269 bits (689), Expect = 1e-84
Identities = 147/374 (39%), Positives = 195/374 (52%), Gaps = 30/374 (8%)
Query: 75 VDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIIL 134
VD A+G T P TG+ + V A DV A + AR A + W ER+ ++L
Sbjct: 26 VDGAAGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAA--QRAWAATPVRERAAVLL 83
Query: 135 RFADLLERHNDEIAALETWDNGKPFEQSAQTE---VPMTTRLFRYYAGWADKIQGLTAPA 191
RF DL+ + +E+ L + GK + A E V +T R YYA A K L AP
Sbjct: 84 RFHDLVLENREELLDLVQLETGKA-RRHAFEEVLDVALTAR---YYARRAPK---LLAPR 136
Query: 192 D--GPYHVQT----LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
G V T L +P GV G I PWN+PL + PAL GN +VLK QTPL+
Sbjct: 137 RRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTPLT 196
Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
AL +LL+EAGLP + +V+G GP G AL + D L FTGST TG+++ + A
Sbjct: 197 ALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQAG-R 253
Query: 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365
L +LELGGK+P IV +DAD+DKAA A A F N GQ C + R +VHES+YD+FV
Sbjct: 254 RLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVR 313
Query: 366 K--ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER---LG 420
A AM+ +G + G I Q E + ++ V GA + GG+ LG
Sbjct: 314 AFVAAVRAMR--LGAGYDYSADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLG 371
Query: 421 AKGYYIKPTVFTGV 434
+ +PTV TGV
Sbjct: 372 P--LFYEPTVLTGV 383
|
Length = 524 |
| >gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Score = 265 bits (680), Expect = 4e-84
Identities = 127/353 (35%), Positives = 190/353 (53%), Gaps = 11/353 (3%)
Query: 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
++DP TG+VI A+G + A++AAR+AFDE W R++++L AD E +
Sbjct: 1 SIDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDW-AHDPRLRARVLLELADAFEANA 59
Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA-PADGPYHVQTLHEP 203
+ +A L +NGK + A+ E+ RYYAG A G P G + + L EP
Sbjct: 60 ERLARLLALENGKILGE-ARFEISGAISELRYYAGLARTEAGRMIEPEPGSFSL-VLREP 117
Query: 204 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA-GLPPGV 262
+GVAG I+PWN P+++ + PALA G T+V+K A QT + ++L E LP GV
Sbjct: 118 MGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQINAAIIRILAEIPSLPAGV 177
Query: 263 LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 322
+N+ + G A L + +VD ++FTGST TG+ + AA LK + LELGGK+P IV
Sbjct: 178 VNLFTESGSEGAAHLVASPDVDVISFTGSTATGR-AIMAAAAPTLKRLGLELGGKTPCIV 236
Query: 323 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK-ANALAMKRVVGDPFK 381
+DAD+D A AL GQ C AGSR V S+ D+ ++ A LA + VG
Sbjct: 237 FDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVK-VGPGLD 295
Query: 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG---AKGYYIKPTVF 431
GP ID +++ + + + GA++ G + AKG +++PT+
Sbjct: 296 PASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLL 348
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455 |
| >gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 263 bits (675), Expect = 2e-83
Identities = 137/346 (39%), Positives = 184/346 (53%), Gaps = 9/346 (2%)
Query: 91 GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAAL 150
G V+ V +A DV+RA + A A W ER+ ++ R ADLLE H DEIA
Sbjct: 1 GAVLGEVGVADAADVDRAAARAAAAQRA--WAATPPRERAAVLRRAADLLEEHADEIADW 58
Query: 151 ETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQI 210
++G A EV AG + QG P+ P+GV G I
Sbjct: 59 IVRESGS-IRPKAGFEVGAAIGELHEAAGLPTQPQGEILPSAPGRLSLARRVPLGVVGVI 117
Query: 211 IPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV-SKLLHEAGLPPGVLNIVSGY 269
P+NFPL++ V PALA GN +VLK +TP+S V ++L EAGLP GVL+++ G
Sbjct: 118 SPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIARLFEEAGLPAGVLHVLPG- 176
Query: 270 GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 329
G AG AL V ++FTGST G+ V + A + +LK V+LELGGK+ IV +DAD+D
Sbjct: 177 GADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGR-HLKKVSLELGGKNALIVLDDADLD 235
Query: 330 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQ 389
AA + F +QGQ C A R VHESV D + K A A VGDP G + GP
Sbjct: 236 LAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPL 295
Query: 390 IDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVK 435
I++ Q +++ + V GA+LE GG G + +PTV +GVK
Sbjct: 296 INARQLDRVHAIVDDSVAAGARLEAGGTY---DGLFYRPTVLSGVK 338
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443 |
| >gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Score = 261 bits (669), Expect = 8e-83
Identities = 121/340 (35%), Positives = 163/340 (47%), Gaps = 23/340 (6%)
Query: 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164
+ A+ A AF W + + ER+ ++ + ADLL DE+A L T + GKP + A+
Sbjct: 1 IEAALDRAHAAFLA--WRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAE-AR 57
Query: 165 TEVPMTTRLFRYYAGWADKIQGLTAP----ADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220
EV + RYYA + + A D +EP+GV I+PWNFP
Sbjct: 58 AEVEKCAWICRYYA---ENAEAFLADEPIETDAG-KAYVRYEPLGVVLGIMPWNFPF--- 110
Query: 221 AWKV----GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVL-NIVSGYGPTAGA 275
W+V P L GNT++LK A P AL + +L EAG P GV N++
Sbjct: 111 -WQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQNLLIDSDQVE-- 167
Query: 276 ALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELA 335
A+ + V + TGS G+ V A K NLK LELGG PFIV +DAD+DKA + A
Sbjct: 168 AIIADPRVRGVTLTGSERAGRAVAAEAGK-NLKKSVLELGGSDPFIVLDDADLDKAVKTA 226
Query: 336 HYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQF 395
N GQ C A R VHE VYD+F+EK VGDP GP +
Sbjct: 227 VKGRLQNAGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLR 286
Query: 396 EKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVK 435
+++ + + V GA L GG+R G + PTV T V
Sbjct: 287 DELHEQVEEAVAAGATLLLGGKRPDGPGAFYPPTVLTDVT 326
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429 |
| >gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Score = 262 bits (673), Expect = 8e-83
Identities = 126/376 (33%), Positives = 190/376 (50%), Gaps = 12/376 (3%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+L ING++V+S + + +P TG+VI V AE+V+ AV+AA+ AF W
Sbjct: 1 LKLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFPA--WSATP 58
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
+R +++ +F LLE + DE+A L T ++GK A+ +V + + ++
Sbjct: 59 VLKRQQVMFKFRQLLEENLDELARLITLEHGKTLAD-ARGDVLRGLEVVEFACSIPHLLK 117
Query: 186 GLTAP--ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243
G A G + +P+GV I P+NFP ++ W A+ACGNT VLK +E+ P
Sbjct: 118 GEYLENVARG-IDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVP 176
Query: 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303
+A+ +++LL EAGLP GVLN+V G G A AL H ++ ++F GST G+ + + AA
Sbjct: 177 GAAMRLAELLQEAGLPDGVLNVVHG-GKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAA 235
Query: 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 363
+ K V G K+ +V DAD+++ A A F GQ C A S D++
Sbjct: 236 ANG-KRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEW 294
Query: 364 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL---- 419
+ K A K VG G GP I E+I I SGV+ GAKL G +
Sbjct: 295 IPKLVERAKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPG 354
Query: 420 GAKGYYIKPTVFTGVK 435
G ++ PT+ V
Sbjct: 355 YENGNFVGPTILDNVT 370
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478 |
| >gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Score = 258 bits (662), Expect = 9e-82
Identities = 125/337 (37%), Positives = 176/337 (52%), Gaps = 14/337 (4%)
Query: 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163
D ++AV AA AF W + ER I+L+ ADLLE DE + G A
Sbjct: 1 DADQAVEAAAAAFPA--WSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGAT-AAWA 57
Query: 164 QTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQ-TLHEPIGVAGQIIPWNFPLLMFAW 222
V + + R A +I G + P+D P + + EP+GV I PWN P+++
Sbjct: 58 GFNVDLAAGMLREAASLITQIIGGSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTR 117
Query: 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY---GPTAGAALAS 279
+ LA GNT+VLK +E +P + + ++ HEAGLP GVLN+V+ P AL +
Sbjct: 118 AIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNVVTHSPEDAPEVVEALIA 177
Query: 280 HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYAL 339
H V K+ FTGST G+I+ + AAK +LKPV LELGGK+P IV EDAD+D AA A +
Sbjct: 178 HPAVRKVNFTGSTRVGRIIAETAAK-HLKPVLLELGGKAPAIVLEDADLDAAANAALFGA 236
Query: 340 FFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKIL 399
F N GQ C + R VHES+ D+FVEK +K F G + G + + +++
Sbjct: 237 FLNSGQICMSTERIIVHESIADEFVEK-----LKAAAEKLFAGPVVLGSLVSAAAADRVK 291
Query: 400 KYIRSGVDGGAKLETGG-ERLGAKGYYIKPTVFTGVK 435
+ + + GAKL GG G + PT+ V
Sbjct: 292 ELVDDALSKGAKLVVGGLADESPSGTSMPPTILDNVT 328
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432 |
| >gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Score = 253 bits (647), Expect = 3e-79
Identities = 131/354 (37%), Positives = 184/354 (51%), Gaps = 17/354 (4%)
Query: 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145
+P TG+V+ V G E + A++ A +T Y+RS I+ + A LLE +
Sbjct: 4 RNPYTGEVVGTVPAGTEEALREALALAA-----SYRSTLTRYQRSAILNKAAALLEARRE 58
Query: 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-----GPYHVQTL 200
E A L T ++G + + EV + R+ A A + G + D + TL
Sbjct: 59 EFARLITLESGLCL-KDTRYEVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTL 117
Query: 201 HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPP 260
EP+GV I P+N PL A K+ PA+A N IVLK +E+TPLSA+Y++ LL+EAGLPP
Sbjct: 118 REPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYEAGLPP 177
Query: 261 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPF 320
+L++V+G G L +H +VD + FTG GK + AA + K LELGG P
Sbjct: 178 DMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAI---AATAGYKRQLLELGGNDPL 234
Query: 321 IVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380
IV +DAD+++AA LA + N GQ C A R VHESV D+FV+ + VVGDP
Sbjct: 235 IVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPM 294
Query: 381 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGV 434
G ID E +I + + GA++ G +R GA PTV V
Sbjct: 295 DPATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQRQGA---LYAPTVLDHV 345
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451 |
| >gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Score = 250 bits (641), Expect = 5e-79
Identities = 113/294 (38%), Positives = 168/294 (57%), Gaps = 6/294 (2%)
Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEP 203
EI+AL + GK +Q A+ EV T Y A WA + +G +D P ++
Sbjct: 13 SEISALIVEEGGKI-QQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRA 71
Query: 204 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVL 263
+GV I+PWNFP + A K+ PAL GNTIV+K +E TP +A+ +K++ E GLP GV
Sbjct: 72 LGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVF 131
Query: 264 NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 323
N+V G G T G LA + +V ++ TGS + G+ ++ AAK N+ V LELGGK+P IV
Sbjct: 132 NLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMAAAAK-NITKVCLELGGKAPAIVM 190
Query: 324 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV-VGDPFKG 382
+DAD+D A + + N GQ C R +V + +YDQFV + AM+ V G+P +
Sbjct: 191 DDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGE-AMQAVQFGNPAER 249
Query: 383 G-IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVK 435
I GP I++ E++ + + V+ GA++ GG+ + KGYY PT+ V+
Sbjct: 250 NDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVR 303
|
Length = 409 |
| >gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Score = 252 bits (645), Expect = 7e-79
Identities = 133/359 (37%), Positives = 179/359 (49%), Gaps = 24/359 (6%)
Query: 87 DPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146
P TG+ + + + DV A + AR A W ER+ + LRF DL+ DE
Sbjct: 2 APFTGEPLGELPQSTPADVEAAFARARAAQRA--WAARPFAERAAVFLRFHDLVLERRDE 59
Query: 147 IAALETWDNGK----PFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQT--- 199
+ L + GK FE+ V + R YYA A+++ G V T
Sbjct: 60 LLDLIQLETGKARRHAFEEVLD--VAIVAR---YYARRAERLLK-PRRRRGAIPVLTRTT 113
Query: 200 -LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGL 258
P GV G I PWN+PL + PAL GN +VLK QT L+AL+ +LL EAGL
Sbjct: 114 VNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALTALWAVELLIEAGL 173
Query: 259 PPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS 318
P + +V+G G G A+ + D + FTGST TG++V + A L +LELGGK+
Sbjct: 174 PRDLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTATGRVVAERAG-RRLIGCSLELGGKN 230
Query: 319 PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 378
P IV EDAD+DKAA A A F N GQ C + R +VHESVYD+FV + A +G
Sbjct: 231 PMIVLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGA 290
Query: 379 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER---LGAKGYYIKPTVFTGV 434
G G I Q +++ ++ V GA + GG LG Y+ +PTV TGV
Sbjct: 291 ALDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGRARPDLGP--YFYEPTVLTGV 347
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454 |
| >gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Score = 252 bits (646), Expect = 7e-79
Identities = 136/373 (36%), Positives = 188/373 (50%), Gaps = 15/373 (4%)
Query: 69 LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYE 128
LING++ +S SGKT P G+VI V A ++ A A A G WP M E
Sbjct: 5 LINGEWKES-SGKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAG-RGWWPTMPLEE 62
Query: 129 RSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT 188
R + +FADLL+ + +E+A L W+ GK + A EV T R ++ G +
Sbjct: 63 RIDCLHKFADLLKENKEEVANLLMWEIGKTL-KDALKEVDRTIDYIRDTIEELKRLDGDS 121
Query: 189 APADGPYHVQTL-----HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243
P D + EP+GV I P+N+PL + K+ PAL GNT+V K A Q
Sbjct: 122 LPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVFKPATQGV 181
Query: 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303
L + +++ H+AG P GV+N+V+G G G L +H +D ++FTGST G + +
Sbjct: 182 LLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKKQHP 241
Query: 304 KSNLKPVTLELGGKSPFIVCEDADVDKAA-ELAHYALFFNQGQCCCAGSRTFVHESVYDQ 362
K + LELGGK P IV DAD++ AA E+ AL ++ GQ C A R VHESV D+
Sbjct: 242 M---KRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYS-GQRCTAIKRVLVHESVADE 297
Query: 363 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 422
VE K VG P+ G+ P ID + + + I V GA + GG R G
Sbjct: 298 LVELLKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGREG-- 355
Query: 423 GYYIKPTVFTGVK 435
G I PT+ V
Sbjct: 356 GNLIYPTLLDPVT 368
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473 |
| >gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Score = 251 bits (642), Expect = 1e-78
Identities = 135/353 (38%), Positives = 189/353 (53%), Gaps = 14/353 (3%)
Query: 87 DPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146
+P G+VI V + D A++ AR + + +ER I+ R ADLL++ +E
Sbjct: 5 NPYDGEVIGKVPADDRADAEEALATARAGAEN--RRALPPHERMAILERAADLLKKRAEE 62
Query: 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQ-----TLH 201
A + + GKP + A+ EV R A A++I+G P D T+
Sbjct: 63 FAKIIACEGGKPIKD-ARVEVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIR 121
Query: 202 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPG 261
EP+GV I P+NFPL + A K+ PA+A G +VLK A +TPLSAL ++K+L EAG+P G
Sbjct: 122 EPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEAGVPEG 181
Query: 262 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321
VL +V+G G A A+ V L+FTGS G+ L A + K + LELGG +P I
Sbjct: 182 VLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGE---ALRANAGGKRIALELGGNAPVI 238
Query: 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381
V DAD+D A E F++ GQ C + R +VHE +YD+F+E A K VGDP
Sbjct: 239 VDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLD 298
Query: 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGV 434
GP I E E++ +++ V+ GA+L GGER GA KPTV V
Sbjct: 299 EDTDVGPLISEEAAERVERWVEEAVEAGARLLCGGERDGA---LFKPTVLEDV 348
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453 |
| >gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Score = 249 bits (639), Expect = 5e-78
Identities = 124/352 (35%), Positives = 164/352 (46%), Gaps = 9/352 (2%)
Query: 88 PRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI 147
P G VI E V A+ AR A W + ER I+ R +LL + DEI
Sbjct: 3 PIDGSVIAERPLASLEAVRAALERARAAQKG--WRAVPLEERKAIVTRAVELLAANTDEI 60
Query: 148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK-IQGLTAPADGPYHVQTLHEPIGV 206
A TW G+P Q+ E+ RY A++ + + P + EP+GV
Sbjct: 61 AEELTWQMGRPIAQAGG-EIRGMLERARYMISIAEEALADIRVPEKDGFERYIRREPLGV 119
Query: 207 AGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIV 266
I PWN+P L V PAL GN ++LK + QTPL + EAGLP GV ++
Sbjct: 120 VLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGERFAAAFAEAGLPEGVFQVL 179
Query: 267 SGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDA 326
T AAL + +D ++FTGS G+ + Q AA V LELGGK P V DA
Sbjct: 180 HLSHET-SAALIADPRIDHVSFTGSVAGGRAI-QRAAAGRFIKVGLELGGKDPAYVRPDA 237
Query: 327 DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQ 386
D+D AAE FFN GQ CC+ R +VHES+YD FVE A+ +GDP
Sbjct: 238 DLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTL 297
Query: 387 GPQIDSEQFEKILKYIRSGVDGGAKLETGGERL---GAKGYYIKPTVFTGVK 435
GP + + + + I + GA+ G A G Y+ PTV T V
Sbjct: 298 GPVVSARAADFVRAQIADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVD 349
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452 |
| >gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family | Back alignment and domain information |
|---|
Score = 248 bits (634), Expect = 4e-77
Identities = 143/379 (37%), Positives = 205/379 (54%), Gaps = 15/379 (3%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
++LLI+G+ V ++G TFPT++P T +V+ A+ A D++ A++AAR+AFDE W R T
Sbjct: 1 SRLLIDGKLVAGSAG-TFPTVNPATEEVLGVAADATAADMDAAIAAARRAFDETDWSRDT 59
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKP--FEQSAQTEVPMTTRLFRYYAGWADK 183
A R + + + D L H +E+ L + G P AQ E P+ + A A+
Sbjct: 60 AL-RVRCLRQLRDALRAHVEELRELTIAEVGAPRMLTAGAQLEGPVDD--LGFAADLAES 116
Query: 184 IQ-----GLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 238
G+ +P P E +GV G I PWNFP + K+GPALA GNT+VLK
Sbjct: 117 YAWTTDLGVASPMGIPTRRTLRREAVGVVGAITPWNFPHQINLAKLGPALAAGNTVVLKP 176
Query: 239 AEQTPLSALYVSKLLHE-AGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 297
A TP A + +L+ E PPGV+NIV+ GA LA VD ++FTGST TG+
Sbjct: 177 APDTPWCAAVLGELIAEHTDFPPGVVNIVTSSDHRLGALLAKDPRVDMVSFTGSTATGRA 236
Query: 298 VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHE 357
V+ AA + LK V LELGGKS FIV +DAD+ A +A + + + GQ C +R V
Sbjct: 237 VMADAAAT-LKKVFLELGGKSAFIVLDDADLAAACSMAAFTVCMHAGQGCAITTRLVVPR 295
Query: 358 SVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE 417
+ YD+ V A A GDP G GP I + Q +++ Y+ V G + GG
Sbjct: 296 ARYDEAVAAAAATMGSIKPGDPADPGTVCGPVISARQRDRVQSYLDLAVAEGGRFACGGG 355
Query: 418 RLG--AKGYYIKPTVFTGV 434
R +G++++PTV G+
Sbjct: 356 RPADRDRGFFVEPTVIAGL 374
|
This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480 |
| >gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Score = 232 bits (592), Expect = 1e-70
Identities = 132/375 (35%), Positives = 191/375 (50%), Gaps = 15/375 (4%)
Query: 68 LLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
L+ING+ V++ + +++P +V+ V++ E A+ AA KAF+ W +
Sbjct: 35 LVINGERVETEN--KIVSINPCDKSEVVGTVSKASQEHAEHALQAAAKAFEA--WKKTDP 90
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI-- 184
ER+ I+ + A ++ R E +AL + GKP+ + A EV YYA ++
Sbjct: 91 EERAAILFKAAAIVRRRRHEFSALLVKEVGKPWNE-ADAEVAEAIDFMEYYARQMIELAK 149
Query: 185 QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
+G + Q ++ P GV I PWNFP + + GN +VLK AE P+
Sbjct: 150 GKPVNSREGETN-QYVYTPTGVTVVISPWNFPFAIMVGMTVAPIVTGNCVVLKPAEAAPV 208
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
A ++L EAGLP GV+ V G G G L H + + FTGS G + + AAK
Sbjct: 209 IAAKFVEILEEAGLPKGVVQFVPGSGSEVGDYLVDHPKTSLITFTGSREVGTRIFERAAK 268
Query: 305 -----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
+LK V E+GGK IV EDAD++ AA+ A + F GQ C AGSR VHE V
Sbjct: 269 VQPGQKHLKRVIAEMGGKDTVIVDEDADIELAAQSAFTSAFGFAGQKCSAGSRAVVHEKV 328
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 419
YD+ VE+ + VG P + GP ID + F KI++YI G G +L +GG
Sbjct: 329 YDEVVERFVEITESLKVGPPDSADVYVGPVIDQKSFNKIMEYIEIGKAEG-RLVSGGCGD 387
Query: 420 GAKGYYIKPTVFTGV 434
+KGY+I PT+F V
Sbjct: 388 DSKGYFIGPTIFADV 402
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511 |
| >gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Score = 227 bits (580), Expect = 2e-69
Identities = 127/359 (35%), Positives = 175/359 (48%), Gaps = 17/359 (4%)
Query: 83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142
+P TG+V+ VA +D+ A++AA KAF P + A+ R+ I+L LE
Sbjct: 1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFR--PMRALPAHRRAAILLHCVARLEE 58
Query: 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGP-----YHV 197
+E+A + GKP + A+ EV FR A A +I G P D
Sbjct: 59 RFEELAETIVLEAGKPIKD-ARGEVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQG 117
Query: 198 QTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG 257
PIG I P+NFPL + A KV PA+A G VLK A +TPLSAL + ++L E G
Sbjct: 118 LVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASRTPLSALILGEVLAETG 177
Query: 258 LPPGVLNIVSGYGPTAGAA-LASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGG 316
LP G +++ A L + + L+FTGS G + A K K V LELGG
Sbjct: 178 LPKGAFSVLPC--SRDDADLLVTDERIKLLSFTGSPAVGWDLKARAGK---KKVVLELGG 232
Query: 317 KSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 376
+ IV DAD+D AA+ + F+ GQ C + R VH SVYD+F + A
Sbjct: 233 NAAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKT 292
Query: 377 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVK 435
GDP GP I + E++ ++ VD GAKL TGG+R G ++PT+ V
Sbjct: 293 GDPKDDATDVGPMISESEAERVEGWVNEAVDAGAKLLTGGKR---DGALLEPTILEDVP 348
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452 |
| >gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Score = 223 bits (571), Expect = 9e-68
Identities = 117/364 (32%), Positives = 176/364 (48%), Gaps = 16/364 (4%)
Query: 78 ASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFA 137
G ++ P G+ I V + ED + AA++AF E W + A +R +I+ +
Sbjct: 9 GGGGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFKE--WRDVPAPKRGEIVRQIG 66
Query: 138 DLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHV 197
D L + + + L + + GK EV + + G + ++ GLT P++ P H
Sbjct: 67 DALRKKKEALGKLVSLEMGKIL-PEGLGEVQEMIDICDFAVGLSRQLYGLTIPSERPGHR 125
Query: 198 QTLHE---PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKL-- 252
+ E P+GV G I +NFP+ ++ W AL CGN +V K + TPL+A+ V+K+
Sbjct: 126 --MMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSPTTPLTAIAVTKIVA 183
Query: 253 --LHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPV 310
L + GLP + ++V G G G AL V ++FTGST G+ V Q A
Sbjct: 184 RVLEKNGLPGAIASLVCG-GADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAA-RFGRS 241
Query: 311 TLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANAL 370
LELGG + IV EDAD+D A +A GQ C R VHES+YD+ +E+
Sbjct: 242 LLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKK- 300
Query: 371 AMKRV-VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPT 429
A K+V +GDP G GP + L I G + GG+ + G Y++PT
Sbjct: 301 AYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPT 360
Query: 430 VFTG 433
+ G
Sbjct: 361 IVEG 364
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474 |
| >gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Score = 218 bits (558), Expect = 5e-66
Identities = 113/370 (30%), Positives = 172/370 (46%), Gaps = 36/370 (9%)
Query: 87 DPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146
DP TG + V EDV+ A++AAR A E W + + ER K++ + + +E
Sbjct: 2 DPATGQHLGSVPADTPEDVDEAIAAARAAQRE--WAKTSFAERRKVLRSLLKYILENQEE 59
Query: 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA-------PADGPYHVQT 199
I + D GK ++ E+ + T +KI+ P P +
Sbjct: 60 ICRVACRDTGKTMVDASLGEI-LVT---------CEKIRWTLKHGEKALRPESRPGGLLM 109
Query: 200 LH-------EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY---- 248
+ EP+GV G I+ WN+P + AL GN IV+K +EQ S+ +
Sbjct: 110 FYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWSSGFFLSI 169
Query: 249 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLK 308
+ + L G P ++ +V+ T AL SH +D + F GS GK V+ AA+S L
Sbjct: 170 IRECLAACGHDPDLVQLVTCLPET-AEALTSHPVIDHITFIGSPPVGKKVMAAAAES-LT 227
Query: 309 PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKAN 368
PV LELGGK P IV +DAD+D+ A + F + GQ C R VHE +YD+ +E
Sbjct: 228 PVVLELGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILT 287
Query: 369 ALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER----LGAKGY 424
G P G + G I +F+++ + + V+ GA+L GG+R +G+
Sbjct: 288 DRVQALRQGPPLDGDVDVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQGH 347
Query: 425 YIKPTVFTGV 434
Y PT+ V
Sbjct: 348 YFPPTLLVDV 357
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465 |
| >gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Score = 210 bits (536), Expect = 1e-62
Identities = 124/394 (31%), Positives = 195/394 (49%), Gaps = 14/394 (3%)
Query: 68 LLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
L+I G++VD+ ++ P +V+ A+ + + A+ AA AF W
Sbjct: 21 LVIGGEWVDTKERMV--SVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFKT--WKDWPQ 76
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
+R++++L+ ADLL R E+ A T++ GK + + A +V RYYA A +++
Sbjct: 77 EDRARLLLKAADLLRRRRRELIATLTYEVGKNWVE-AIDDVAEAIDFIRYYARAALRLRY 135
Query: 187 --LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
+ ++ + +G I PWNFP+ +F + +A GNT++ K AE +
Sbjct: 136 PAVEVVPYPGEDNESFYVGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVV 195
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
V ++ HEAG PPGV+ + G G GA L H + + FTGS TGK + + AA+
Sbjct: 196 VGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAAAR 255
Query: 305 -----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
+ K + +E GGK+ IV E AD + E + F QGQ C A SR + +
Sbjct: 256 LAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGA 315
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 419
Y+ +E+ A + VG P + G GP ID+EQ K+L YI G + G +L GG+RL
Sbjct: 316 YEPVLERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRL 374
Query: 420 GAKGYYIKPTVFTGVKVLILISPASISPNILHTF 453
+GY++ PTV V I+ I +L
Sbjct: 375 EGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVI 408
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500 |
| >gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 203 bits (519), Expect = 2e-60
Identities = 125/360 (34%), Positives = 173/360 (48%), Gaps = 22/360 (6%)
Query: 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
T++P TG+ + ++V+ A++ A F + + T +R++ ADLLE
Sbjct: 5 TINPATGETVKTFTALTDDEVDAAIARAHARFRD--YRTTTFAQRARWANAAADLLEAEA 62
Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA--PAD----GPYHVQ 198
D++AAL T + GK SA+ E + FRYYA + + L A PAD G
Sbjct: 63 DQVAALMTLEMGKTL-ASAKAEALKCAKGFRYYA---EHAEALLADEPADAAAVGASRAY 118
Query: 199 TLHEPIGVAGQIIPWNFPLLMFAWKV----GPALACGNTIVLKTAEQTPLSALYVSKLLH 254
++P+GV ++PWNFPL W+V PAL GN +LK A P +ALY++ L
Sbjct: 119 VRYQPLGVVLAVMPWNFPL----WQVVRFAAPALMAGNVGLLKHASNVPQTALYLADLFR 174
Query: 255 EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLEL 314
AG P G + G A A+ V TGS G+ V +A +K LEL
Sbjct: 175 RAGFPDGCFQTLL-VGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDE-IKKTVLEL 232
Query: 315 GGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 374
GG PFIV AD+D+AAE A A N GQ C A R VH VYD F EK A
Sbjct: 233 GGSDPFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAAL 292
Query: 375 VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGV 434
VGDP GP + +++ K + V GA + GG+R G++ PTV T +
Sbjct: 293 RVGDPTDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDI 352
|
Length = 457 |
| >gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 202 bits (516), Expect = 8e-60
Identities = 129/373 (34%), Positives = 180/373 (48%), Gaps = 20/373 (5%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
L I G+ V + P G V+ V + +DV RA + A A+ P +T Y
Sbjct: 6 LRIAGEKVSR--DRVIEVRYPYNGTVVGTVPKASVDDVRRAFAIAA-AYR----PTLTRY 58
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
ERS I+ R A LL +EI+ L T ++G ++ + EV + + A A + G
Sbjct: 59 ERSAILDRAAALLAARKEEISDLITLESGLS-KKDSLYEVGRVADVLTFAAAEALRDDGQ 117
Query: 188 T-----APADGPYHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
P V T EP+ GV I P+N P+ A K+ PA+A N +V+K +E+
Sbjct: 118 IFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEK 177
Query: 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
TPLSALY++ +L+EAGLPP +L +V+G L ++ VD + FTG GK +
Sbjct: 178 TPLSALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYI--- 234
Query: 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
AA++ + LELGG P IV EDAD+D+AA+LA + N GQ C A R V ESV D
Sbjct: 235 AARAGYRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVAD 294
Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 421
+F E GDP + G ID + + GA+L G R GA
Sbjct: 295 RFTELLVEKTRAWRYGDPMDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVRDGA 354
Query: 422 KGYYIKPTVFTGV 434
PTV V
Sbjct: 355 ---LYAPTVLDRV 364
|
This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472 |
| >gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Score = 197 bits (503), Expect = 3e-58
Identities = 116/333 (34%), Positives = 169/333 (50%), Gaps = 19/333 (5%)
Query: 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163
V+ AV+AAR AF W ++ ER+ I+ RFA+LL+ + +E+A L + + GKP + A
Sbjct: 1 QVDAAVAAARAAFPG--WAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWE-A 57
Query: 164 QTEVP-------MTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFP 216
QTEV ++ + + G + T A G ++ H P GV P+NFP
Sbjct: 58 QTEVAAMAGKIDISIKAYHERTG-----ERATPMAQGRAVLR--HRPHGVMAVFGPFNFP 110
Query: 217 LLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAA 276
+ + PAL GNT+V K +E TP A + +L EAGLPPGVLN+V G G G A
Sbjct: 111 GHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVLNLVQG-GRETGEA 169
Query: 277 LASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAH 336
LA+H +D L FTGS TG ++ + A K + LE+GG +P +V + AD+D AA L
Sbjct: 170 LAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIV 229
Query: 337 YALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQF 395
+ F GQ C R V + V D F+E+ A + +G P GP I +
Sbjct: 230 QSAFLTAGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAA 289
Query: 396 EKILKYIRSGVDGGAKLETGGERLGAKGYYIKP 428
+ L + + G + ERL A ++ P
Sbjct: 290 ARYLLAQQDLLALGGEPLLAMERLVAGTAFLSP 322
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431 |
| >gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Score = 196 bits (501), Expect = 4e-57
Identities = 125/380 (32%), Positives = 184/380 (48%), Gaps = 30/380 (7%)
Query: 69 LINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
+ING+ ++ G P +DP I V+ +AEDV+ A++ A AF W
Sbjct: 36 IINGEETETGEGA--PVIDPADHERTIGEVSLADAEDVDAALAIAAAAFAG--WSATPVE 91
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
ER++I+ + ADLLE + E+ AL + GK A EV RYYA A ++
Sbjct: 92 ERAEILEKAADLLEANRGELIALAAAEAGKTLAD-ADAEVREAIDFCRYYAAQARELFSD 150
Query: 188 TAPADGPYHVQTLH-EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
+ L GV I PWNFPL +F ++ ALA GNT++ K AEQTPL A
Sbjct: 151 PELPGPTGELNGLELHGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIA 210
Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ-LAAKS 305
+LLHEAG+P VL +V G G G AL +H +D + FTGST T K++ + LA +
Sbjct: 211 ARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERD 270
Query: 306 N-LKPVTLELGGKSPFIVCEDADVDKA-AELAHYALFFNQGQCCCAGSRTFVHESVYDQF 363
+ P+ E GGK+ IV A ++A ++ A F + GQ C A ++ E + ++F
Sbjct: 271 GPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSA-FGSAGQRCSALRLLYLQEEIAERF 329
Query: 364 VE--KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL-- 419
+E K ++K VGDP+ GP ID + + + +L G L
Sbjct: 330 IEMLKGAMASLK--VGDPWDLSTDVGPLIDKPAGKLLRAHT--------ELMRGEAWLIA 379
Query: 420 -----GAKGYYIKPTVFTGV 434
GY++ P + V
Sbjct: 380 PAPLDDGNGYFVAPGIIEIV 399
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518 |
| >gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 188 bits (480), Expect = 1e-54
Identities = 118/374 (31%), Positives = 184/374 (49%), Gaps = 11/374 (2%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
I G+F + ASG P +P T +V T VA ++V+ AV++AR+ F W + +
Sbjct: 2 NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETF--LTWGQTSL 59
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
+R+ ++LR+ LL+ H DEIA L T ++GK A +V + + G ++G
Sbjct: 60 AQRTSVLLRYQALLKEHRDEIAELITAEHGKTHS-DALGDVARGLEVVEHACGVNSLLKG 118
Query: 187 LTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
T+ V ++ +P+GV I P+NFP ++ W A+ACGNT VLK +E+ P +
Sbjct: 119 ETSTQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSA 178
Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
A+ +++L EAG P GVLN+V G A L H +V ++F GST G+ + +
Sbjct: 179 AVKLAELFSEAGAPDGVLNVVHG-DKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSAH 237
Query: 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365
K V G K+ +V DAD D AA+ A + GQ C A S V D++V
Sbjct: 238 G-KRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAIS-AAVLVGAADEWVP 295
Query: 366 KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY- 424
+ A K +G G + GP I + +++ I G GA++ G GY
Sbjct: 296 EIRERAEKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYE 355
Query: 425 ---YIKPTVFTGVK 435
++ PT+ V
Sbjct: 356 EGNWVGPTLLERVP 369
|
Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477 |
| >gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Score = 180 bits (459), Expect = 6e-52
Identities = 106/343 (30%), Positives = 161/343 (46%), Gaps = 39/343 (11%)
Query: 108 AVSAARKAFDEG-----PWPRMTAYERSKIILRFADLLERHNDEI-AALETWDNGKPFEQ 161
V+ R+ F G W R + +L + +EI AAL D GKP +
Sbjct: 3 LVARLRETFLTGKTRSLEW-------RKAQLKALKRMLTENEEEIAAALYA-DLGKPPAE 54
Query: 162 SAQTEVPMTTRLFRYY----AGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPL 217
+ TE+ + + W + P + EP+GV I PWN+PL
Sbjct: 55 AYLTEIAVVLGEIDHALKHLKKWMKPRRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPL 114
Query: 218 -LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAA 276
L A +G A+A GNT+VLK +E P ++ ++KL+ + P + +V G A A
Sbjct: 115 QLALAPLIG-AIAAGNTVVLKPSELAPATSALLAKLIPKY-FDPEAVAVVEGGVEVATAL 172
Query: 277 LASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAH 336
LA D + FTGS GKIV++ AAK +L PVTLELGGKSP IV +DA+++ AA
Sbjct: 173 LAEPF--DHIFFTGSPAVGKIVMEAAAK-HLTPVTLELGGKSPCIVDKDANLEVAARRIA 229
Query: 337 YALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQ----IDS 392
+ F N GQ C A VHES+ D+ +E +K+ + + + ++ P I+
Sbjct: 230 WGKFLNAGQTCIAPDYVLVHESIKDELIE-----ELKKAIKEFYGEDPKESPDYGRIINE 284
Query: 393 EQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVK 435
F+++ + K+ GG+ + YI PT+ V
Sbjct: 285 RHFDRLASLL-----DDGKVVIGGQV-DKEERYIAPTILDDVS 321
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426 |
| >gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 181 bits (462), Expect = 8e-52
Identities = 122/367 (33%), Positives = 176/367 (47%), Gaps = 49/367 (13%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
L ING ++ G+ F + +P +G+V+ + A V+ AV AAR AF W R++
Sbjct: 3 LWINGDWIA-GQGEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFPA--WARLSFE 59
Query: 128 ERSKIILRFADLLERHNDEIA---ALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184
ER I+ RFA LLE + +E+A A ET GKP ++A TEV +KI
Sbjct: 60 ERQAIVERFAALLEENKEELAEVIARET---GKPLWEAA-TEV----------TAMINKI 105
Query: 185 QGLTAPADGPYHVQT--------------LHEPIGVAGQIIPWNFPLLMFAWKVGPALAC 230
++ A YH +T H P GV P+NFP + + PAL
Sbjct: 106 -AISIQA---YHERTGEKRSEMADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLA 161
Query: 231 GNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTG 290
GNT+V K +E TP A KL +AGLP GVLN+V G G G ALA+H ++D L FTG
Sbjct: 162 GNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTG 220
Query: 291 STTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAG 350
S TG ++ + A K + LE+GG +P ++ E AD+D A L + F + GQ C
Sbjct: 221 SANTGYLLHRQFAGQPEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCA 280
Query: 351 SRTFVHESVY-DQFVEKANALAMKRVVGDPFKGGIQQ-----GPQIDSEQFEKILKYIRS 404
R V + D F+ + A+A + VG + G I + + ++
Sbjct: 281 RRLLVPQGAQGDAFLARLVAVAKRLTVGRWD----AEPQPFMGAVISEQAAQGLVAAQAQ 336
Query: 405 GVDGGAK 411
+ G K
Sbjct: 337 LLALGGK 343
|
Length = 487 |
| >gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Score = 179 bits (455), Expect = 9e-51
Identities = 114/369 (30%), Positives = 164/369 (44%), Gaps = 22/369 (5%)
Query: 69 LINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
+I + + P +P D++ V V A+ +A++AF W A
Sbjct: 41 IIGHSYKADGEAQ--PVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFPT--WNATPAK 96
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
ER+ + R ADLLE H E+ AL + GK +A EV RYYA + G
Sbjct: 97 ERAAKLDRLADLLELHMPELMALCVREAGKTI-HNAIAEVREAVDFCRYYAKQVRDVLG- 154
Query: 188 TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247
+ E GV I PWNFPL +F ++ ALA GNT++ K AEQT L A
Sbjct: 155 ----------EFSVESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAY 204
Query: 248 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 307
+L+ EAG P G + ++ G G GAAL S + +AFTGST +++ Q A+
Sbjct: 205 RAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQRED 264
Query: 308 KPVTL--ELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365
PV L E GG++ IV A ++ + F + GQ C A V E V D+ +
Sbjct: 265 APVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLT 324
Query: 366 KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG---AKLETGGERLGAK 422
+ VG P GP ID+E + +L +I A+L R
Sbjct: 325 MIQGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQH 384
Query: 423 GYYIKPTVF 431
G ++ PT+F
Sbjct: 385 GTFVAPTLF 393
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500 |
| >gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 182 bits (464), Expect = 2e-50
Identities = 122/368 (33%), Positives = 175/368 (47%), Gaps = 22/368 (5%)
Query: 69 LINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
++NG V A G+ P ++P D++ V E DV +A+ AA A W
Sbjct: 117 IVNGAPV--AGGEPRPVINPADPDDIVGTVTEATEADVEQALEAAVAAAPI--WSATPPA 172
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA-DKIQG 186
ER+ I+ R ADL+E ++ L + GK +A EV RYYAG A D
Sbjct: 173 ERAAILERAADLMEAQMPQLMGLLVREAGKTL-SNAIAEVREAVDFLRYYAGQARDTFGN 231
Query: 187 LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
LT H P+G I PWNFPL +F ++ ALA GN+++ K AEQTPL A
Sbjct: 232 LT------------HRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIA 279
Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306
+LLHEAG+PPGVL ++ G G T GAAL + V + FTGST +++ + AK
Sbjct: 280 AQAVRLLHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQ 339
Query: 307 LKPVTL--ELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
+P+ L E GG++ IV A ++ + F + GQ C A + E V D+ +
Sbjct: 340 GRPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRIL 399
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI-RSGVDGGAKLETGGERLGAKG 423
+ VG+P + GP ID+E I K+I G + KG
Sbjct: 400 TMLKGAMAELRVGNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKG 459
Query: 424 YYIKPTVF 431
++ PT+
Sbjct: 460 TFVAPTLI 467
|
Length = 769 |
| >gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 182 bits (465), Expect = 5e-50
Identities = 138/377 (36%), Positives = 188/377 (49%), Gaps = 37/377 (9%)
Query: 75 VDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKII 133
+ + G+ P + P V+ VA +AE V +A++AAR AF W R ER+ I+
Sbjct: 556 IINGEGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFPA--WSRTPVEERAAIL 613
Query: 134 LRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG----LTA 189
R ADLLE + E+ AL + GK Q A EV RYYA A ++ G L
Sbjct: 614 ERAADLLEANRAELIALCVREAGKTL-QDAIAEVREAVDFCRYYAAQARRLFGAPEKLPG 672
Query: 190 PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 249
P G + LH GV I PWNFPL +F +V ALA GNT++ K AEQTPL A
Sbjct: 673 P-TGESNELRLH-GRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEA 730
Query: 250 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ-LAAKSNLK 308
KLLHEAG+P VL ++ G G T GAAL + + +AFTGST T +I+ + LAA+
Sbjct: 731 VKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDG-P 789
Query: 309 PVTL--ELGGKSPFIVCEDA---------DVDKAAELAHYALFFNQGQCCCAGSRTFVHE 357
V L E GG++ IV D+ DV +A F + GQ C A FV E
Sbjct: 790 IVPLIAETGGQNAMIV--DSTALPEQVVDDVVTSA-------FRSAGQRCSALRVLFVQE 840
Query: 358 SVYDQFVEK-ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKL--ET 414
+ D+ +E A+A + VGDP GP ID+E + +I + A+L +
Sbjct: 841 DIADRVIEMLKGAMA-ELKVGDPRLLSTDVGPVIDAEAKANLDAHIER-MKREARLLAQL 898
Query: 415 GGERLGAKGYYIKPTVF 431
G+++ PT F
Sbjct: 899 PLPAGTENGHFVAPTAF 915
|
Length = 1038 |
| >gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 178 bits (453), Expect = 2e-48
Identities = 129/379 (34%), Positives = 176/379 (46%), Gaps = 56/379 (14%)
Query: 76 DSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIIL 134
G T P L+P DV+ V E AEDV RA++AA+ AF E W A ER+ I+
Sbjct: 562 GDVDGGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFPE--WSATPAAERAAILE 619
Query: 135 RFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGP 194
R ADL+E H E+ AL + GK +A EV RYYA Q
Sbjct: 620 RAADLMEAHMPELFALAVREAGKTL-ANAIAEVREAVDFLRYYAA-----QARRLLNGPG 673
Query: 195 YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH 254
H+P+G I PWNFPL +F ++ AL GNT++ K AEQTPL A +LLH
Sbjct: 674 ------HKPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAARAVRLLH 727
Query: 255 EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTL-- 312
EAG+P L ++ G G T GAAL + + + FTGST +++ + AK + PV L
Sbjct: 728 EAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPLIA 787
Query: 313 ELGGKSPFIVCED---------ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 363
E GG++ IV D ADV +A F + GQ C A + E V D+
Sbjct: 788 ETGGQNAMIV--DSSALPEQVVADVIASA-------FDSAGQRCSALRVLCLQEDVADRV 838
Query: 364 VEKANAL--AMK-RVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL- 419
+ L AM +GDP++ GP ID+E I +I + G +
Sbjct: 839 LT---MLKGAMDELRIGDPWRLSTDVGPVIDAEAQANIEAHI-------EAMRAAGRLVH 888
Query: 420 -------GAKGYYIKPTVF 431
KG ++ PT+
Sbjct: 889 QLPLPAETEKGTFVAPTLI 907
|
Length = 1208 |
| >gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Score = 169 bits (430), Expect = 1e-47
Identities = 115/340 (33%), Positives = 163/340 (47%), Gaps = 32/340 (9%)
Query: 107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTE 166
+A + A +A TA ER + R + +EI A D KP + TE
Sbjct: 8 QAHALALRAS--------TAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTE 59
Query: 167 V-PMTTRL---FRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFA 221
+ P+ + + ++ W K + + P + +EP GV I PWN+P F
Sbjct: 60 ILPVLSEINHAIKHLKKWM-KPKRVRTPLLLFGTKSKIRYEPKGVCLIISPWNYP---FN 115
Query: 222 WKVGP---ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 278
GP A+A GNT +LK +E TP ++ ++K++ EA + + G A A L
Sbjct: 116 LAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREA-FDEDEVAVFEGDAEVAQALLE 174
Query: 279 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 338
+ D + FTGS GKIV+ AAK +L VTLELGGKSP IV E AD+ KAA+ +
Sbjct: 175 --LPFDHIFFTGSPAVGKIVMAAAAK-HLASVTLELGGKSPTIVDETADLKKAAKKIAWG 231
Query: 339 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQ----IDSEQ 394
F N GQ C A FVHESV D FVE A +++ G + P ++
Sbjct: 232 KFLNAGQTCIAPDYVFVHESVKDAFVEHLKA-EIEKFYGK--DAARKASPDLARIVNDRH 288
Query: 395 FEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGV 434
F+++ + V GAK+E GG+ A YI PTV T V
Sbjct: 289 FDRLKGLLDDAVAKGAKVEFGGQ-FDAAQRYIAPTVLTNV 327
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433 |
| >gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 169 bits (431), Expect = 2e-47
Identities = 111/325 (34%), Positives = 163/325 (50%), Gaps = 14/325 (4%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
L I+G++ G++F + +P T +V+ A A V AV+AAR AF W R++
Sbjct: 1 LFIDGKWRAGQ-GESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFPA--WARLSLE 57
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEV-PMTTRLFRYYAGWADKIQG 186
ER ++ RFA LLE + +A + + GKP ++ TEV M ++ + ++ G
Sbjct: 58 ERIAVVQRFAALLEERKEALARVIARETGKPLWETR-TEVASMIGKVAISIKAYHER-TG 115
Query: 187 LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
+ H P GV P+NFP + + PAL GNT+V K +E TP A
Sbjct: 116 ESENPMPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVA 175
Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306
KL +AGLP GVLN+V G G ALA+H ++D L FTGS+ TG ++ + A
Sbjct: 176 EETVKLWEKAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRP 234
Query: 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY-DQFVE 365
K + LE+GG +P IV E AD+D A L + F + GQ C R V + D F+
Sbjct: 235 EKILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLA 294
Query: 366 KANALAMKRVVGD------PFKGGI 384
+ +A + VG PF G +
Sbjct: 295 RLVEVAERLTVGAWDAEPQPFMGAV 319
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484 |
| >gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 161 bits (410), Expect = 1e-44
Identities = 117/370 (31%), Positives = 162/370 (43%), Gaps = 52/370 (14%)
Query: 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAF-DEGPWPRMTAYERSKIILRFADLLERHN 144
++P I V + +++A+ A F D W + A+ER I+ R ADL+E
Sbjct: 4 VNPFDLKPIGEVPTVDWAAIDKALDTAHALFLDRNNW--LPAHERIAILERLADLMEERA 61
Query: 145 DEIAALETWDNGKPF---------------------EQSAQTEVPMTTRLFRYYAGWADK 183
DE+A L + GKP Q E+PM
Sbjct: 62 DELALLIAREGGKPLVDAKVEVTRAIDGVELAADELGQLGGREIPM-------------- 107
Query: 184 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243
GLT + G T EPIGV I +N PL + +V PA+A G +++K A TP
Sbjct: 108 --GLTPASAGRI-AFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATP 164
Query: 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303
LS L LLHEAGLP G V A L + V +F GS G ++
Sbjct: 165 LSCLAFVDLLHEAGLPEGWCQAVPCENAVA-EKLVTDPRVAFFSFIGSARVGWML----- 218
Query: 304 KSNLKPVT---LELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
+S L P T LE GG +P IV AD+D F++ GQ C + R FV +
Sbjct: 219 RSKLAPGTRCALEHGGAAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIA 278
Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 420
D F ++ A A K VVGDP + GP I + +++ +++ V GA+L GG+RL
Sbjct: 279 DDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRLS 338
Query: 421 AKGYYIKPTV 430
Y PTV
Sbjct: 339 DTTY--APTV 346
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455 |
| >gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Score = 160 bits (407), Expect = 2e-44
Identities = 87/242 (35%), Positives = 130/242 (53%), Gaps = 23/242 (9%)
Query: 201 HEPIGVAGQIIPWNFPLLMFAWKVGP---ALACGNTIVLKTAEQTPLSALYVSKLLHEAG 257
EP+GV I PWN+P+L+ + P A+A G T+VLK +E TP +A +++L+ +
Sbjct: 106 KEPLGVVLIIGPWNYPVLL---ALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPKY- 161
Query: 258 LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 317
L P +V G P A L DK+ +TGS G+I+ + AAK +L PVTLELGGK
Sbjct: 162 LDPDAFQVVQGGVPETTALLEQKF--DKIFYTGSGRVGRIIAEAAAK-HLTPVTLELGGK 218
Query: 318 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 377
SP IV ++AD++ AA+ + F N GQ C A V SVYD+FVE +K+V+
Sbjct: 219 SPVIVTKNADLELAAKRILWGKFGNAGQICVAPDYVLVDPSVYDEFVE-----ELKKVLD 273
Query: 378 DPFKGGIQQGPQ----IDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTG 433
+ + GG P ++ F ++ + + K+ GGE A +I PT+ +
Sbjct: 274 EFYPGGANASPDYTRIVNPRHFNRLKSLLDT---TKGKVVIGGEMDEAT-RFIPPTIVSD 329
Query: 434 VK 435
V
Sbjct: 330 VS 331
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436 |
| >gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Score = 159 bits (404), Expect = 1e-43
Identities = 85/239 (35%), Positives = 125/239 (52%), Gaps = 21/239 (8%)
Query: 202 EPIGVAGQIIPWNFPL-LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPP 260
EP GV I PWN+P L A +G A+A GNT VLK +E TP ++ ++K++ E
Sbjct: 99 EPYGVVLIIAPWNYPFQLALAPLIG-AIAAGNTAVLKPSELTPNTSKVIAKIIEET-FDE 156
Query: 261 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPF 320
+ +V G L D + FTGS GKIV++ AAK +L PVTLELGGKSP
Sbjct: 157 EYVAVVEGGVEENQELLDQKF--DYIFFTGSVRVGKIVMEAAAK-HLTPVTLELGGKSPC 213
Query: 321 IVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380
IV EDA++ AA+ + F N GQ C A VHESV ++F++ +K + +
Sbjct: 214 IVDEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLVHESVKEKFIK-----ELKEEIKKFY 268
Query: 381 KGGIQQGP---QIDSEQ-FEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVK 435
+ P +I +E+ F+++ + +G K+ GG + YI+PT+ V
Sbjct: 269 GEDPLESPDYGRIINEKHFDRLAGLLDNG-----KIVFGGNT-DRETLYIEPTILDNVT 321
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449 |
| >gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 158 bits (401), Expect = 1e-43
Identities = 96/315 (30%), Positives = 149/315 (47%), Gaps = 29/315 (9%)
Query: 113 RKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIA-ALETWDNGKPFEQSAQTEVPMTT 171
+ AF P P + ER + R LL + D +A A+ + ++ E+ +
Sbjct: 8 KAAFLANPPP--SLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSI 65
Query: 172 RLFRYY----AGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP- 226
++ W + P + ++P+GV G I+PWN+PL + +GP
Sbjct: 66 AGIKHARKHLKKWMKPSRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYL---ALGPL 122
Query: 227 --ALACGNTIVLKTAEQTP-LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 283
ALA GN +++K +E TP SAL +++LL E + +V+G G AA S +
Sbjct: 123 IAALAAGNRVMIKPSEFTPRTSAL-LAELLAEY-FDEDEVAVVTG-GADVAAAF-SSLPF 178
Query: 284 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 343
D L FTGST G+ V++ AA+ NL PVTLELGGKSP I+ DAD+ KAAE + N
Sbjct: 179 DHLLFTGSTAVGRHVMRAAAE-NLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLNA 237
Query: 344 GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQ----IDSEQFEKIL 399
GQ C A V E ++FV A A A+ ++ + P I+ + ++
Sbjct: 238 GQTCVAPDYVLVPEDKLEEFVAAAKA-AVAKMYPT-----LADNPDYTSIINERHYARLQ 291
Query: 400 KYIRSGVDGGAKLET 414
+ GA++
Sbjct: 292 GLLEDARAKGARVIE 306
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434 |
| >gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Score = 160 bits (405), Expect = 4e-43
Identities = 134/432 (31%), Positives = 210/432 (48%), Gaps = 22/432 (5%)
Query: 11 SRSFTSSSPTLFSRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITPPVKVDYTQLLI 70
S S T+++ T+ R ++L R + S S++ + P PP + LI
Sbjct: 64 SSSTTTTTTTMLLRISGNNL-RPLRPQFLALRSSWLSTSPEQSTQPQMPPRVPN----LI 118
Query: 71 NGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERS 130
G FV+S S ++P T +V++ V E+ AVSAA++AF W R
Sbjct: 119 GGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFPL--WRNTPITTRQ 176
Query: 131 KIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP 190
+++L+F +L+ ++ D++A T + GK + S ++ + + G A G P
Sbjct: 177 RVMLKFQELIRKNMDKLAMNITTEQGKTLKDS-HGDIFRGLEVVEHACGMATLQMGEYLP 235
Query: 191 -ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 249
++ EP+GV I P+NFP ++ W A+ CGNT +LK +E+ P +++ +
Sbjct: 236 NVSNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVIL 295
Query: 250 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKP 309
++L EAGLP GVLNIV G T A+ ++ ++F GS T G + AA K
Sbjct: 296 AELAMEAGLPDGVLNIVHGTNDTVN-AICDDEDIRAVSFVGSNTAGMHIYARAAAKG-KR 353
Query: 310 VTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR-TFVHE--SVYDQFVEK 366
+ +G K+ +V DA++D A F GQ C A S FV + S D+ VE+
Sbjct: 354 IQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGDAKSWEDKLVER 413
Query: 367 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY-- 424
A AL K G + GP I + E+I + I+SGVD GAKL G + GY
Sbjct: 414 AKAL--KVTCGSEPDADL--GPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEK 469
Query: 425 --YIKPTVFTGV 434
+I PT+ +GV
Sbjct: 470 GNFIGPTILSGV 481
|
Length = 604 |
| >gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 156 bits (395), Expect = 3e-42
Identities = 106/342 (30%), Positives = 163/342 (47%), Gaps = 25/342 (7%)
Query: 51 AAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVS 110
A + D + +G++ S+SGK+ +P T V E+VN+A+
Sbjct: 1 MAGTGFFAEILDGDVYKYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAME 60
Query: 111 AARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMT 170
+A+ A + W + ++R++++ + A +L+ H IA + KP + A TEV +
Sbjct: 61 SAKAA--QKAWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKP-AKDAVTEVVRS 117
Query: 171 TRLFRYYAGWADKIQGLTAPADGPYHVQ-------------TLHEPIGVAGQIIPWNFPL 217
L Y A +G+ +G + V T P+GV I P+N+P+
Sbjct: 118 GDLISYTAE-----EGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPV 172
Query: 218 LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAAL 277
+ K+ PAL GN +VLK Q ++AL++ H AG P G+++ V+G G G L
Sbjct: 173 NLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFL 232
Query: 278 ASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHY 337
H V+ ++FTG T + ++ K+ + P+ +ELGGK IV EDAD+D AA
Sbjct: 233 TMHPGVNCISFTGGDTG----IAISKKAGMVPLQMELGGKDACIVLEDADLDLAAANIIK 288
Query: 338 ALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379
F GQ C A V ESV D VEK NA K VG P
Sbjct: 289 GGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGPP 330
|
Length = 496 |
| >gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Score = 154 bits (392), Expect = 9e-42
Identities = 105/364 (28%), Positives = 169/364 (46%), Gaps = 22/364 (6%)
Query: 78 ASGKTFPTLDPRTGDVITHVAEGEAEDVN---RAVSAARKAFDEGPWPRMTAYERSKIIL 134
A+G +++P I V E ED RA A K W ++ A +R +I+
Sbjct: 31 ANGPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAKI-----WMQVPAPKRGEIVR 85
Query: 135 RFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGP 194
+ D L D + L + + GK + EV + + G + ++ G P++ P
Sbjct: 86 QIGDALRAKLDYLGRLVSLEMGKILAEGI-GEVQEIIDMCDFAVGLSRQLNGSIIPSERP 144
Query: 195 YHVQT-LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKL- 252
H+ + P+G+ G I +NFP + W AL CGN +V K A TPL + ++KL
Sbjct: 145 NHMMMEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAMTKLV 204
Query: 253 ---LHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKP 309
L + LP + G G G A+A + ++FTGS+ G +V Q +
Sbjct: 205 AEVLEKNNLPGAIFTSFCG-GAEIGEAIAKDTRIPLVSFTGSSKVGLMV-QQTVNARFGK 262
Query: 310 VTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANA 369
LEL G + IV +DAD+ A +A GQ C R +HES+YD +E+
Sbjct: 263 CLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLT 322
Query: 370 LAMKRVVGDPFKGGIQQGP---QIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYI 426
+ + +GDP + G GP + FEK ++ I+S G K+ TGG + ++G ++
Sbjct: 323 VYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKS---QGGKILTGGSAIESEGNFV 379
Query: 427 KPTV 430
+PT+
Sbjct: 380 QPTI 383
|
Length = 508 |
| >gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Score = 148 bits (375), Expect = 3e-39
Identities = 110/372 (29%), Positives = 162/372 (43%), Gaps = 60/372 (16%)
Query: 93 VITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE-RHNDEIAALE 151
V+ +A V +A+ AA +A E W RM +R+ I L+ ADLL ++ E+ A
Sbjct: 59 VLATYHYADAALVEKAIEAALEARKE--WARMPFEDRAAIFLKAADLLSGKYRYELNAAT 116
Query: 152 TWDNGK-PFEQSAQTEVPMTTRL---FRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA 207
GK + Q E+ L R+ +A+++ Y Q L P GV
Sbjct: 117 MLGQGKNVW----QAEIDAACELIDFLRFNVKYAEEL----------YAQQPLSSPAGVW 162
Query: 208 GQ------------IIPWNF----------PLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
+ + P+NF P LM GN ++ K ++ LS
Sbjct: 163 NRLEYRPLEGFVYAVSPFNFTAIGGNLAGAPALM-----------GNVVLWKPSDTAVLS 211
Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTT-----GKIVLQ 300
V K+L EAGLPPGV+N V G GP G + + + L FTGST T +I
Sbjct: 212 NYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWKQIGEN 271
Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
L + E GGK+ +V ADVD F QGQ C A SR +V ES++
Sbjct: 272 LDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLW 331
Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI-RSGVDGGAKLETGGERL 419
+ E+ + +GDP G ID + F++I YI + D A++ GG+
Sbjct: 332 PEVKERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCD 391
Query: 420 GAKGYYIKPTVF 431
+ GY+++PTV
Sbjct: 392 DSVGYFVEPTVI 403
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522 |
| >gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Score = 145 bits (368), Expect = 3e-38
Identities = 117/375 (31%), Positives = 170/375 (45%), Gaps = 18/375 (4%)
Query: 68 LLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
L+I G+ V + SG+ + P V+ E N+AV AA A E W +
Sbjct: 34 LVIGGEEVWT-SGERIYQVSPHNHQAVLAKATNATEELANKAVEAALDAKKE--WSLLPF 90
Query: 127 YERSKIILRFADLLE---RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 183
Y+R+ I L+ ADLL R EI A K Q+ V FR+ A +A +
Sbjct: 91 YDRAAIFLKAADLLSGPYRA--EILAATMLGQSKTVYQAEIDAVAELIDFFRFNAKYARE 148
Query: 184 IQGLTAPADGPYHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242
+ + +T + P+ G I P+NF + PAL GNT++ K ++
Sbjct: 149 LYEQQPISAPGEWNRTEYRPLEGFVYAISPFNFTAIAGNLAGAPALM-GNTVIWKPSDTA 207
Query: 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTT-----GKI 297
LS V ++L EAGLPPGV+N V G GP + + ++ + FTGST T ++
Sbjct: 208 MLSNYLVMRILEEAGLPPGVINFVPGDGPLVSDTVLADPDLAGIHFTGSTPTFKHLWKQV 267
Query: 298 VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHE 357
L N + E GGK +V ADV+ F QGQ C A SR +V
Sbjct: 268 AQNLDRYHNFPRIVGETGGKDFHVVHPSADVEHVVSGTIRGAFEYQGQKCSACSRLYVPH 327
Query: 358 SVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLET--G 415
S++ +F + A + VGDP G G ID + F KI+KYI + L G
Sbjct: 328 SLWPRFKGRLLAELSRVKVGDPDDFGTFMGAVIDEKSFAKIVKYIEHAKSDPSALTILAG 387
Query: 416 GERLGAKGYYIKPTV 430
G+ + GY+++PTV
Sbjct: 388 GKYDDSVGYFVEPTV 402
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532 |
| >gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 140 bits (355), Expect = 5e-37
Identities = 102/359 (28%), Positives = 158/359 (44%), Gaps = 23/359 (6%)
Query: 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
+++P TG+ ++ + A+D+ A+ A F + W R++ + L +
Sbjct: 11 SVNPATGEQLSVLPWAGADDIENALQLAAAGFRD--WRETNIDYRAQKLRDIGKALRARS 68
Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQT----- 199
+E+A + T + GKP Q A+ EV + L +YA G P V+
Sbjct: 69 EEMAQMITREMGKPINQ-ARAEVAKSANLCDWYAE-----HGPAMLKAEPTLVENQQAVI 122
Query: 200 LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLP 259
+ P+G I+PWNFPL P L GN +LK A A ++++ +AG+P
Sbjct: 123 EYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPNVMGCAQLIAQVFKDAGIP 182
Query: 260 PGVLNIVSGYGPTAGAALASHMEVDK----LAFTGSTTTGKIVLQLAAKSNLKPVTLELG 315
GV ++ A S M D + TGS G + A + LK LELG
Sbjct: 183 QGVYGWLN-----ADNDGVSQMINDSRIAAVTVTGSVRAGAAIGAQAGAA-LKKCVLELG 236
Query: 316 GKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 375
G PFIV DAD++ A + A + N GQ C A R + E + F E+ A A
Sbjct: 237 GSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALK 296
Query: 376 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGV 434
+GDP GP + +++ + + + GA+L GGE++ G Y PTV V
Sbjct: 297 MGDPRDEENALGPMARFDLRDELHHQVEATLAEGARLLLGGEKIAGAGNYYAPTVLANV 355
|
Length = 462 |
| >gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Score = 138 bits (349), Expect = 7e-36
Identities = 95/313 (30%), Positives = 151/313 (48%), Gaps = 15/313 (4%)
Query: 129 RSKIILRFADLLERHNDEI-AALETWDNGKPFEQSAQTEVPMTT----RLFRYYAGWADK 183
R + + +LE + E A+ D G+ ++ TEV +T L ++ +
Sbjct: 31 RKQQLRNLLRMLEENKQEFSEAVHK-DLGRHPFETKMTEVLLTVAEIEHLLKHLDEYLKP 89
Query: 184 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243
+ T GP + EP+GV I WN+PL + + A+A GNT+VLK +E +P
Sbjct: 90 EKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSP 149
Query: 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303
++ ++KLL + L P + ++ G L D + FTGS GK+V+Q AA
Sbjct: 150 HTSKLMAKLLTKY-LDPSYVRVIEGGVEVTTELLKEPF--DHIFFTGSPRVGKLVMQAAA 206
Query: 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 363
+ NL P TLELGGKSP IV + ++ AA + F N GQ C A VH S+ D+F
Sbjct: 207 E-NLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGKFLNAGQTCVAPDYVLVHRSIKDKF 265
Query: 364 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 423
+E A A+K G+ K ++ +++ + I+ D G K+ GGE + +
Sbjct: 266 IE-ALKEAIKEFFGEDPKKSEDYSRIVNEFHTKRLAELIK---DHGGKVVYGGE-VDIEN 320
Query: 424 YYIKPTVFTGVKV 436
Y+ PT+ +
Sbjct: 321 KYVAPTIIVNPDL 333
|
Length = 493 |
| >gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Score = 136 bits (345), Expect = 1e-35
Identities = 116/343 (33%), Positives = 160/343 (46%), Gaps = 39/343 (11%)
Query: 108 AVSAARKAFDEGPWPRMTAYE-RSKIILRFADLLERHNDEI-AALETWDNGKPFEQSAQT 165
AV AR+AF G + E R + + +LE + DEI AL D KP ++ +
Sbjct: 3 AVRRAREAFSSG---KTRPLEFRIQQLEALLRMLEENEDEIVEALAK-DLRKPKFEAVLS 58
Query: 166 EVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTL-------HEPIGVAGQIIPWNFPL- 217
E+ + +Y + P ++ TL EP+GV I WN+PL
Sbjct: 59 EILLVKNEIKYAI---SNLPEWMKPEPVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQ 115
Query: 218 LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLN-----IVSGYGPT 272
L VG A+A GN +V+K +E +P +A KLL E L P L+ +V G G
Sbjct: 116 LTLVPLVG-AIAAGNCVVIKPSEVSPATA----KLLAE--LIPKYLDKECYPVVLG-GVE 167
Query: 273 AGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAA 332
L D + +TGST+ GKIV+Q AAK +L PVTLELGGKSP V + D+D AA
Sbjct: 168 ETTELLKQ-RFDYIFYTGSTSVGKIVMQAAAK-HLTPVTLELGGKSPCYVDKSCDIDVAA 225
Query: 333 ELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDS 392
+ F N GQ C A V ++FVE +K G+ K G I+
Sbjct: 226 RRIAWGKFINAGQTCIAPDYVLCTPEVQEKFVEALKK-TLKEFYGEDPKESPDYGRIIND 284
Query: 393 EQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVK 435
F+++ K + G K+ GG+ K YI PTV T VK
Sbjct: 285 RHFQRLKKLLSGG-----KVAIGGQ-TDEKERYIAPTVLTDVK 321
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443 |
| >gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 136 bits (344), Expect = 3e-34
Identities = 115/368 (31%), Positives = 164/368 (44%), Gaps = 56/368 (15%)
Query: 87 DPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP-WPRMTAYERSKIILRFADLLERHND 145
DPR D++ +V E +V +A+ +A A P W ER+ I+ R ADL+E
Sbjct: 668 DPR--DIVGYVREATPAEVEQALESAVNA---APIWFATPPAERAAILERAADLMEAQMQ 722
Query: 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA-DKIQGLTAPADGPYHVQTLHEPI 204
+ L + GK F +A EV RYYAG D T H P+
Sbjct: 723 TLMGLLVREAGKTF-SNAIAEVREAVDFLRYYAGQVRDDFDNDT------------HRPL 769
Query: 205 GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLN 264
G I PWNFPL +F +V ALA GN+++ K AEQTPL A ++L EAG+P GV+
Sbjct: 770 GPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQ 829
Query: 265 IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ------LAAKSNLKPVTLELGGKS 318
++ G G T GAAL + V + FTGST ++ LQ L + P+ E GG++
Sbjct: 830 LLPGRGETVGAALVADARVRGVMFTGSTEVARL-LQRNLAGRLDPQGRPIPLIAETGGQN 888
Query: 319 PFIVCEDA-------DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALA 371
IV A DV +A F + GQ C A + + V D+ L
Sbjct: 889 AMIVDSSALTEQVVADVLASA-------FDSAGQRCSALRVLCLQDDVADR------TLK 935
Query: 372 MKR------VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK---LETGGERLGAK 422
M R +G+P + GP ID+E I ++I++ G
Sbjct: 936 MLRGAMAECRMGNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQS 995
Query: 423 GYYIKPTV 430
G ++ PT+
Sbjct: 996 GTFVPPTL 1003
|
Length = 1318 |
| >gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Score = 115 bits (288), Expect = 6e-28
Identities = 77/287 (26%), Positives = 118/287 (41%), Gaps = 12/287 (4%)
Query: 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164
RA+ AA R+ +R+ + R L + +IAA GK + +
Sbjct: 1 PERALLAADI--STKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGWMFAEN 58
Query: 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHE---PIGVAGQIIPWNFPLLMFA 221
R + ++ +I G Q H P G I +NFPL +
Sbjct: 59 ICGDQVQLRARAFVIYSYRIPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPL 118
Query: 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASH 280
++ ALA GN +++K + + +LLH AG LPP + +++G G T AL H
Sbjct: 119 LQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPEDVTLINGDGKT-MQALLLH 177
Query: 281 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDAD-VDKAAELAHYAL 339
+ FTGS+ + +LA + + LEL G + ++ DA VD A +
Sbjct: 178 PNPKMVLFTGSSRVAE---KLALDAKQARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDM 234
Query: 340 FFNQGQCCCAGSRTFVHESVYDQ-FVEKANALAMKRVVGDPFKGGIQ 385
GQ C A S FV E+ VEK AL +R + D G +Q
Sbjct: 235 TACSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLEDLLLGPVQ 281
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442 |
| >gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Score = 114 bits (286), Expect = 1e-27
Identities = 86/258 (33%), Positives = 121/258 (46%), Gaps = 27/258 (10%)
Query: 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILR-FADLLERHNDEI-AALETWDNGKPFEQS 162
R V R+ F G R + E K L+ L++ + D+I AAL D GKP +S
Sbjct: 1 APRLVRELRETFRSG---RTRSAEWRKSQLKGLLRLVDENEDDIFAALRQ-DLGKPSAES 56
Query: 163 AQTEVPMTTR--------LFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWN 214
+ EV + L ++ A K T PA + + EP+GV I WN
Sbjct: 57 FRDEVSVLVSSCKLAIKELKKWMAPEKVKTPLTTFPAKA----EIVSEPLGVVLVISAWN 112
Query: 215 FPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAG 274
FP L+ V A+A GN +VLK +E P ++ ++KL+ L + ++ G G
Sbjct: 113 FPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLI-PEYLDTKAIKVIEG-GVPET 170
Query: 275 AALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAE- 333
AL + DK+ FTGS G+I++ AAK +L PVTLELGGK P IV D+ A
Sbjct: 171 TALLEQ-KWDKIFFTGSPRVGRIIMAAAAK-HLTPVTLELGGKCPVIVDSTVDLKVAVRR 228
Query: 334 --LAHYALFFNQGQCCCA 349
+ N GQ C A
Sbjct: 229 IAGGKWGC--NNGQACIA 244
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432 |
| >gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Score = 96.7 bits (240), Expect = 2e-21
Identities = 76/232 (32%), Positives = 118/232 (50%), Gaps = 12/232 (5%)
Query: 102 AEDVNRAVSAARKAFDEGPWPRMTAYE-RSKIILRFADLLERHNDEIAALETWDNGKPFE 160
A D + V+ R++FD+G YE R + + + + H EI A D GKP
Sbjct: 9 AADASILVTELRRSFDDGV---TRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPEL 65
Query: 161 QSAQTEVPM---TTRL-FRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFP 216
+S+ EV + + +L + W + T+ P + + EP+GV I WN+P
Sbjct: 66 ESSVYEVSLLRNSIKLALKQLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYP 125
Query: 217 LLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAA 276
L+ V A++ GN +VLK +E P S+ ++KLL E L + +V G A
Sbjct: 126 FLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLL-EQYLDSSAVRVVEGAVTETTAL 184
Query: 277 LASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 328
L + DK+ +TGS+ G++++ AAK +L PV LELGGKSP +V D D+
Sbjct: 185 L--EQKWDKIFYTGSSKIGRVIMAAAAK-HLTPVVLELGGKSPVVVDSDTDL 233
|
Length = 484 |
| >gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 89.8 bits (223), Expect = 2e-19
Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 14/231 (6%)
Query: 98 AEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKI--ILRFADLLERHNDEIAALETWDN 155
E E + +V+ R+ ++ G R + +S++ +LR L + AL D
Sbjct: 1 EEAPGETLEGSVAELRETYESGR-TRSLEWRKSQLKGLLRL--LKDNEEAIFKALHQ-DL 56
Query: 156 GKPFEQSAQTEVPMTTRLFRY----YAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQII 211
GK ++ + EV + T+ W + P + + EP+GV
Sbjct: 57 GKHRVEAYRDEVGVLTKSANLALSNLKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFS 116
Query: 212 PWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGP 271
WNFP+ + + A+A GN +VLK +E P ++ +++ + L + ++ G GP
Sbjct: 117 SWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANI-PKYLDSKAVKVIEG-GP 174
Query: 272 TAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 322
G L H + DK+ FTGS G+I++ AAK +L PV LELGGK P IV
Sbjct: 175 AVGEQLLQH-KWDKIFFTGSPRVGRIIMTAAAK-HLTPVALELGGKCPCIV 223
|
Length = 484 |
| >gnl|CDD|237016 PRK11903, PRK11903, aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 89.4 bits (222), Expect = 4e-19
Identities = 95/396 (23%), Positives = 154/396 (38%), Gaps = 53/396 (13%)
Query: 70 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY-E 128
+ G++ SG P DP TG+ + V D+ A + AR+ G R Y +
Sbjct: 9 VAGRWQA-GSGAGTPLFDPVTGEELVRV-SATGLDLAAAFAFARE--QGGAALRALTYAQ 64
Query: 129 RSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT 188
R+ ++ +L+ + D + T N + ++ YYA +
Sbjct: 65 RAALLAAIVKVLQANRDAYYDIAT-ANSGTTRNDSAVDIDGGIFTLGYYAKLGAALGDAR 123
Query: 189 APADGP---------YHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 238
DG + Q + P GVA I +NFP K PAL G +++K
Sbjct: 124 LLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFPAWGLWEKAAPALLAGVPVIVKP 183
Query: 239 AEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHM-EVDKLAFTGSTTTGK 296
A T + K + AG LP G L++V G + A L H+ D ++FTGS T
Sbjct: 184 ATATAWLTQRMVKDVVAAGILPAGALSVVCG----SSAGLLDHLQPFDVVSFTGSAETAA 239
Query: 297 I------VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ------- 343
+ V+Q + + N++ +L ++ DA A + LF +
Sbjct: 240 VLRSHPAVVQRSVRVNVEADSLNSA-----LLGPDAAPGSEA----FDLFVKEVVREMTV 290
Query: 344 --GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 401
GQ C A R FV E++YD E A K VG+P G++ GP + Q +
Sbjct: 291 KSGQKCTAIRRIFVPEALYDAVAEALAARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAG 350
Query: 402 IRSGVDGGAKLETGGERLG------AKGYYIKPTVF 431
+ + + A++ G A + PT+
Sbjct: 351 L-AALRAQAEVLFDGGGFALVDADPAVAACVGPTLL 385
|
Length = 521 |
| >gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Score = 81.9 bits (203), Expect = 1e-16
Identities = 106/405 (26%), Positives = 156/405 (38%), Gaps = 70/405 (17%)
Query: 70 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPR-MTAYE 128
+ GQ+ +G D TG+V+ V+ E D AV+ AR+ GP R +T +E
Sbjct: 5 VAGQWHAG-TGDGRTLHDAVTGEVVARVS-SEGLDFAAAVAYARE--KGGPALRALTFHE 60
Query: 129 RSKIILRFADLLERHNDEIAALETW------DNGKPFEQSAQTEVPMTTRLFRYYAGWAD 182
R+ ++ A L +++ AL D+ + T LF YA
Sbjct: 61 RAAMLKALAKYLMERKEDLYALSAATGATRRDSWIDIDGGIGT-------LF-AYASLGR 112
Query: 183 KIQGLTAPADGPYHVQTLHEPI----------------GVAGQIIPWNFPLLMFAWKVGP 226
+ + + V+ EP+ GVA I +NFP+ K P
Sbjct: 113 RE-----LPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFNFPVWGMLEKFAP 167
Query: 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHMEVDK 285
AL G +++K A T V K + E+G LP G L ++ G + G L E D
Sbjct: 168 ALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICG---SVGDLLDHLGEQDV 224
Query: 286 LAFTGSTTTGKIVLQLAAKSNLK----PVTLELGGKSPFIVCEDADVDKAAELAHYALFF 341
+AFTGS T +L A N+ E + I+ DA + LF
Sbjct: 225 VAFTGSAATAA---KLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPE----FDLFV 277
Query: 342 NQ---------GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDS 392
+ GQ C A R FV E+ D +E A K VVGDP G++ GP +
Sbjct: 278 KEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEALKARLAKVVVGDPRLEGVRMGPLVSR 337
Query: 393 EQFEKILKYI---RSG---VDGGAKLETGGERLGAKGYYIKPTVF 431
EQ E + + + V GG KG + PT+
Sbjct: 338 EQREDVRAAVATLLAEAEVVFGGPDRFEVVGADAEKGAFFPPTLL 382
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. Length = 513 |
| >gnl|CDD|143444 cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Score = 73.3 bits (180), Expect = 7e-14
Identities = 100/367 (27%), Positives = 158/367 (43%), Gaps = 34/367 (9%)
Query: 69 LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYE 128
L+ G++ +++ T LDP GD V + + +++N V + R+ G + E
Sbjct: 2 LVAGKWKGASNYTTL--LDPLNGDKFISVPDTDEDEINEFVDSLRQCPKSGLHNPLKNPE 59
Query: 129 R----SKIILRFADLLERHNDE--IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWAD 182
R + R A L + E A L K Q A EV +T + +AG D
Sbjct: 60 RYLLYGDVSHRVAHELRKPEVEDFFARLIQRVAPKSDAQ-ALGEVVVTRKFLENFAG--D 116
Query: 183 KIQ----GLTAPADGPYHVQTLHE---PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIV 235
+++ P D + Q P G I P+NFPL + A ++ AL GN +
Sbjct: 117 QVRFLARSFNVPGD--HQGQQSSGYRWPYGPVAIITPFNFPLEIPALQLMGALFMGNKPL 174
Query: 236 LKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG 295
LK + + +LLH G+P ++++ GPT L FTGS+
Sbjct: 175 LKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPTMNKIL-LEANPRMTLFTGSS--- 230
Query: 296 KIVLQLAAKSNLKPVTLELGGKSPFIVCED-ADVDKAAELAHYALFFNQGQCCCAGSRTF 354
K+ +LA + + K V LE G I+ D +DVD A + GQ C A S F
Sbjct: 231 KVAERLALELHGK-VKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILF 289
Query: 355 VHESVYDQ-FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD-GGAKL 412
HE+ ++K ALA +R + D + GP + + E+IL ++ + GAK+
Sbjct: 290 AHENWVQAGILDKLKALAEQRKLED-----LTIGP-VLTWTTERILDHVDKLLAIPGAKV 343
Query: 413 ETGGERL 419
GG+ L
Sbjct: 344 LFGGKPL 350
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. Length = 489 |
| >gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Score = 71.8 bits (177), Expect = 2e-13
Identities = 71/256 (27%), Positives = 104/256 (40%), Gaps = 37/256 (14%)
Query: 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI---AALETWDNGKPFEQ 161
V+ A +AA AF+ + ++ R+ + AD +E DE+ A ET G P E
Sbjct: 1 VDAAAAAAAAAFES--YRALSPARRAAFLEAIADEIEALGDELVARAHAET---GLP-EA 54
Query: 162 SAQTEVPMTTRLFRYYA------GWADKIQGLTAPADGPY---HVQTLHEPIGVAGQIIP 212
Q E+ TT R +A W D P P ++ + P+G
Sbjct: 55 RLQGELGRTTGQLRLFADLVREGSWLDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGA 114
Query: 213 WNFPLLMFAWKVG-----PALACGNTIVLK-------TAEQTPLSALYVSKLLHEAGLPP 260
NFP A+ V ALA G +V+K T+E L A + L GLP
Sbjct: 115 SNFP---LAFSVAGGDTASALAAGCPVVVKAHPAHPGTSE---LVARAIRAALRATGLPA 168
Query: 261 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL-KPVTLELGGKSP 319
GV +++ G G G AL H + + FTGS G+ + AA P ELG +P
Sbjct: 169 GVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNP 228
Query: 320 FIVCEDADVDKAAELA 335
+ A ++ +A
Sbjct: 229 VFILPGALAERGEAIA 244
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454 |
| >gnl|CDD|143396 cd07077, ALDH-like, NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Score = 70.7 bits (173), Expect = 3e-13
Identities = 61/257 (23%), Positives = 93/257 (36%), Gaps = 24/257 (9%)
Query: 125 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRL----------F 174
+R II A+ L +A+ + G + M
Sbjct: 14 HDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTE 73
Query: 175 RYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTI 234
R IQ + P +G +V+ PIGV I+P PL +A N
Sbjct: 74 RGITASVGHIQDVLLPDNGETYVRA--FPIGVTMHILPSTNPLSGIT-SALRGIATRNQC 130
Query: 235 VLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA----SHMEVDKLAFTG 290
+ + P + LL +A I+ Y P LA SH ++D + TG
Sbjct: 131 IFRPHPSAPFTN-RALALLFQAADAAHGPKILVLYVPHPSDELAEELLSHPKIDLIVATG 189
Query: 291 STTTGKIVLQLAAK-SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCA 349
G+ + A K S PV G SP +V E AD ++A+ H + FF+Q C +
Sbjct: 190 ----GRDAVDAAVKHSPHIPVIGFGAGNSPVVVDETADEERASGSVHDSKFFDQ-NACAS 244
Query: 350 GSRTFVHESVYDQFVEK 366
+V + V D E+
Sbjct: 245 EQNLYVVDDVLDPLYEE 261
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 397 |
| >gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 71.4 bits (175), Expect = 3e-13
Identities = 105/388 (27%), Positives = 165/388 (42%), Gaps = 35/388 (9%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPR-MT 125
Q ++G++ + G+ P D TG+V+ V E DV AV+ AR+ GP R +T
Sbjct: 2 QSYLSGEWR-TGQGEGVPVRDASTGEVLARVT-SEGLDVAAAVAWAREV--GGPALRALT 57
Query: 126 AYERSKIILRFADLLERHNDEIAALETW------DNGKPFEQSAQTEVPMTTRLFRYYAG 179
+ER++++ A L + + AL DN + T ++ R
Sbjct: 58 FHERARMLKALAQYLSERKEALYALAATTGATRRDNWVDIDGGIGTLFTYSSLGRRELPD 117
Query: 180 WADKIQGLTAP--ADGPYHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACGNTIVL 236
+ P DG + + + P GVA QI +NFP+ K PA G +
Sbjct: 118 ANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFNFPVWGLLEKFAPAFLAGVPTLA 177
Query: 237 KTAEQTPLSALYVSKLLHEAGL-PPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG 295
K A T A + + + E+GL P G L ++ G +AG L D +AFTGS T
Sbjct: 178 KPATPTAYVAEALVRTMVESGLLPEGSLQLICG---SAGDLLDHLDHRDVVAFTGSAATA 234
Query: 296 KIVLQLAAKSNLK----PVTLELGGKSPFIVCEDADVDKAAELAHYA------LFFNQGQ 345
+L A N+ E + I+ EDA D+ E +A L GQ
Sbjct: 235 D---RLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEP-EFDLFAQEIVRELTIKAGQ 290
Query: 346 CCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 405
C A R V +++ + ++ A K V+GDP + G+ GP + EQ + + +
Sbjct: 291 KCTAIRRVIVPKALLEAVLKALQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAAL 350
Query: 406 VDGGAKLETGG-ERLGAKGYYIKPTVFT 432
+ GA++ GG RL G + PT+
Sbjct: 351 LAAGAEVRLGGPGRL--DGAFFPPTLLL 376
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663 |
| >gnl|CDD|236931 PRK11563, PRK11563, bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 58.7 bits (143), Expect = 4e-09
Identities = 72/253 (28%), Positives = 106/253 (41%), Gaps = 40/253 (15%)
Query: 205 GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVL 263
GVA I +NFP+ K+ PA G ++K A T V +L+ E+G LP G L
Sbjct: 150 GVAVHINAFNFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGAL 209
Query: 264 NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 323
++ G +AG L D + FTGS T + +L A N+ + PF
Sbjct: 210 QLICG---SAGDLLDHLDGQDVVTFTGSAATAQ---KLRAHPNV------VANSVPFTA- 256
Query: 324 EDAD--------VDKAAELAHYALFFNQ---------GQCCCAGSRTFVHESVYDQFVEK 366
+AD D + LF + GQ C A R V ++ D +E
Sbjct: 257 -EADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAVIEA 315
Query: 367 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG----ERLGA- 421
A K VVGDP G++ G EQ E + + + + + A++ GG E +GA
Sbjct: 316 LRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLA-AAEIVFGGPDSFEVVGAD 374
Query: 422 --KGYYIKPTVFT 432
KG + PT+
Sbjct: 375 AEKGAFFPPTLLY 387
|
Length = 675 |
| >gnl|CDD|143439 cd07121, ALDH_EutE, Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Score = 48.0 bits (115), Expect = 7e-06
Identities = 76/320 (23%), Positives = 119/320 (37%), Gaps = 67/320 (20%)
Query: 103 EDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162
V+ AV+AA+ A + + + T +R KII + L + +E+A + E+
Sbjct: 4 ATVDDAVAAAKAAQKQ--YRKCTLADREKIIEAIREALLSNAEELAEMA-------VEE- 53
Query: 163 AQTEVPMTTRLFRYYAGWADKIQGLTAPAD---GPYHVQ----------TLHE--PIGVA 207
T + R DKI A+ G + TL E P GV
Sbjct: 54 --------TGMGRV----EDKIAKNHLAAEKTPGTEDLTTTAWSGDNGLTLVEYAPFGVI 101
Query: 208 GQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVL 263
G I P P LA GN +V + Y +L+++A G P ++
Sbjct: 102 GAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAEAGGPDNLV 161
Query: 264 NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG---GKSPF 320
V L +H +++ L TG G V++ A S K + G G P
Sbjct: 162 VTVEEPTIETTNELMAHPDINLLVVTG----GPAVVKAALSSGKKAI----GAGAGNPPV 213
Query: 321 IVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380
+V E AD++KAA F+ C A +SV D + AM+R
Sbjct: 214 VVDETADIEKAARDIVQGASFDNNLPCIAEKEVIAVDSVADYLIA-----AMQR------ 262
Query: 381 KGGIQQGPQIDSEQFEKILK 400
++ EQ E++L+
Sbjct: 263 ----NGAYVLNDEQAEQLLE 278
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. Length = 429 |
| >gnl|CDD|143400 cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Score = 46.9 bits (111), Expect = 1e-05
Identities = 42/179 (23%), Positives = 69/179 (38%), Gaps = 9/179 (5%)
Query: 192 DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVL----KTAEQTPLSAL 247
D + EPIGV I P P +K +L N+I+ + + T +A
Sbjct: 84 DENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAAT 143
Query: 248 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 307
+ + AG P ++ + L + L TG K AA S+
Sbjct: 144 LLLQAAVAAGAPENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPAVVK-----AAYSSG 198
Query: 308 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 366
KP G +P ++ E AD+ +A + + F+ G C + V +SVYD+ +
Sbjct: 199 KPAIGVGAGNTPVVIDETADIKRAVQSIVKSKTFDNGVICASEQSVIVVDSVYDEVMRL 257
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. Length = 439 |
| >gnl|CDD|143440 cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Score = 42.5 bits (101), Expect = 4e-04
Identities = 44/180 (24%), Positives = 72/180 (40%), Gaps = 20/180 (11%)
Query: 202 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVL----KTAEQTPLSALYVSKLLHEAG 257
EP+GV +IP P +K AL N I+ + + + +A + + AG
Sbjct: 94 EPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAG 153
Query: 258 LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG-- 315
P G++ + L H +VD + TG K AA S+ KP +G
Sbjct: 154 APEGLIQWIEEPSIELTQELMKHPDVDLILATGGPGMVK-----AAYSSGKPA---IGVG 205
Query: 316 -GKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 374
G P + E AD+ +A + + F+ G C + V + +YD+ +KR
Sbjct: 206 PGNVPAYIDETADIKRAVKDIILSKTFDNGTICASEQSVIVDDEIYDEVRA-----ELKR 260
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. Length = 436 |
| >gnl|CDD|237956 PRK15398, PRK15398, aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 5e-04
Identities = 79/320 (24%), Positives = 118/320 (36%), Gaps = 67/320 (20%)
Query: 103 EDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162
V+ AV+AA+ A + + + R +II + L H +E+A L E+
Sbjct: 36 ASVDDAVAAAKVAQQR--YQQKSLAMRQRIIDAIREALLPHAEELAELA-------VEE- 85
Query: 163 AQTEVPMTTRLFRYYAGWADKIQGLTAPAD---GPYHVQ----------TLHE--PIGVA 207
T + R DKI A A+ G + TL E P GV
Sbjct: 86 --------TGMGRV----EDKIAKNVAAAEKTPGVEDLTTEALTGDNGLTLIEYAPFGVI 133
Query: 208 GQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVL 263
G + P P LA GN++V +L +LL+EA G P ++
Sbjct: 134 GAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNEAIVAAGGPENLV 193
Query: 264 NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG---GKSPF 320
V+ L H + L TG G V++ A KS K + G G P
Sbjct: 194 VTVAEPTIETAQRLMKHPGIALLVVTG----GPAVVKAAMKSGKKAI----GAGAGNPPV 245
Query: 321 IVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380
+V E AD++KAA F+ C A V +SV D+ + M++
Sbjct: 246 VVDETADIEKAARDIVKGASFDNNLPCIAEKEVIVVDSVADELMR-----LMEK------ 294
Query: 381 KGGIQQGPQIDSEQFEKILK 400
+ +EQ EK+ K
Sbjct: 295 ----NGAVLLTAEQAEKLQK 310
|
Length = 465 |
| >gnl|CDD|131341 TIGR02288, PaaN_2, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 39.5 bits (92), Expect = 0.004
Identities = 54/193 (27%), Positives = 81/193 (41%), Gaps = 30/193 (15%)
Query: 213 WNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS-ALYVS---KLLHEAGLPPGVLNIVSG 268
WN +FA +LA GN +++K L AL V ++L EAG P ++ + +
Sbjct: 208 WNTYPGLFA-----SLATGNPVLVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAA- 261
Query: 269 YGPTAGAA--LASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDA 326
+ P AA LA+ V + FTGS G+ + Q A ++ V E G + I+
Sbjct: 262 FDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNARQAQ---VYTEKAGVNTVIIESTD 318
Query: 327 DVDKAAELAHYALFFNQGQCCCA---------GSRTFVHESVYDQFVEKANALAMKRVVG 377
D ++L GQ C G RT YD+ V A A+ ++G
Sbjct: 319 DYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSYDE-VAADLATAIDGLLG 377
Query: 378 DPFK-----GGIQ 385
DP + G IQ
Sbjct: 378 DPARATAVLGAIQ 390
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has a domain which is a member of the pfam00171 family. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. Length = 551 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 459 | |||
| PLN02466 | 538 | aldehyde dehydrogenase family 2 member | 100.0 | |
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| KOG2451 | 503 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| COG1012 | 472 | PutA NAD-dependent aldehyde dehydrogenases [Energy | 100.0 | |
| PRK11241 | 482 | gabD succinate-semialdehyde dehydrogenase I; Provi | 100.0 | |
| PLN02766 | 501 | coniferyl-aldehyde dehydrogenase | 100.0 | |
| PLN02419 | 604 | methylmalonate-semialdehyde dehydrogenase [acylati | 100.0 | |
| cd07140 | 486 | ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge | 100.0 | |
| cd07142 | 476 | ALDH_F2BC Arabidosis aldehyde dehydrogenase family | 100.0 | |
| TIGR03374 | 472 | ABALDH 1-pyrroline dehydrogenase. Members of this | 100.0 | |
| cd07113 | 477 | ALDH_PADH_NahF Escherichia coli NAD+-dependent phe | 100.0 | |
| PLN02278 | 498 | succinic semialdehyde dehydrogenase | 100.0 | |
| cd07141 | 481 | ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro | 100.0 | |
| PLN02315 | 508 | aldehyde dehydrogenase family 7 member | 100.0 | |
| PRK13252 | 488 | betaine aldehyde dehydrogenase; Provisional | 100.0 | |
| PLN02467 | 503 | betaine aldehyde dehydrogenase | 100.0 | |
| cd07117 | 475 | ALDH_StaphAldA1 Uncharacterized Staphylococcus aur | 100.0 | |
| cd07559 | 480 | ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep | 100.0 | |
| cd07143 | 481 | ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh | 100.0 | |
| TIGR03216 | 481 | OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy | 100.0 | |
| cd07123 | 522 | ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate | 100.0 | |
| cd07091 | 476 | ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families | 100.0 | |
| TIGR01236 | 533 | D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| TIGR02299 | 488 | HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd | 100.0 | |
| cd07085 | 478 | ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog | 100.0 | |
| cd07144 | 484 | ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd | 100.0 | |
| cd07119 | 482 | ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be | 100.0 | |
| cd07097 | 473 | ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent | 100.0 | |
| PRK13473 | 475 | gamma-aminobutyraldehyde dehydrogenase; Provisiona | 100.0 | |
| PRK09847 | 494 | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen | 100.0 | |
| TIGR01804 | 467 | BADH glycine betaine aldehyde dehydrogenase. Betai | 100.0 | |
| PRK09457 | 487 | astD succinylglutamic semialdehyde dehydrogenase; | 100.0 | |
| cd07116 | 479 | ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen | 100.0 | |
| cd07086 | 478 | ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip | 100.0 | |
| cd07124 | 512 | ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl | 100.0 | |
| cd07138 | 466 | ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac | 100.0 | |
| cd07130 | 474 | ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se | 100.0 | |
| cd07088 | 468 | ALDH_LactADH-AldA Escherichia coli lactaldehyde de | 100.0 | |
| cd07139 | 471 | ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy | 100.0 | |
| PRK13968 | 462 | putative succinate semialdehyde dehydrogenase; Pro | 100.0 | |
| TIGR01237 | 511 | D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| PRK09406 | 457 | gabD1 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| cd07111 | 480 | ALDH_F16 Aldehyde dehydrogenase family 16A1-like. | 100.0 | |
| cd07131 | 478 | ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen | 100.0 | |
| cd07083 | 500 | ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)- | 100.0 | |
| TIGR03240 | 484 | arg_catab_astD succinylglutamic semialdehyde dehyd | 100.0 | |
| cd07151 | 465 | ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd | 100.0 | |
| TIGR01780 | 448 | SSADH succinate-semialdehyde dehydrogenase. SSADH | 100.0 | |
| PRK03137 | 514 | 1-pyrroline-5-carboxylate dehydrogenase; Provision | 100.0 | |
| TIGR01722 | 477 | MMSDH methylmalonic acid semialdehyde dehydrogenas | 100.0 | |
| cd07128 | 513 | ALDH_MaoC-N N-terminal domain of the monoamine oxi | 100.0 | |
| TIGR03250 | 472 | PhnAcAld_DH putative phosphonoacetaldehyde dehydro | 100.0 | |
| cd07120 | 455 | ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh | 100.0 | |
| TIGR02278 | 663 | PaaN-DH phenylacetic acid degradation protein paaN | 100.0 | |
| cd07112 | 462 | ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent | 100.0 | |
| cd07145 | 456 | ALDH_LactADH_F420-Bios Methanocaldococcus jannasch | 100.0 | |
| cd07118 | 454 | ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr | 100.0 | |
| PF00171 | 462 | Aldedh: Aldehyde dehydrogenase family; InterPro: I | 100.0 | |
| PLN00412 | 496 | NADP-dependent glyceraldehyde-3-phosphate dehydrog | 100.0 | |
| cd07115 | 453 | ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy | 100.0 | |
| cd07110 | 456 | ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro | 100.0 | |
| cd07107 | 456 | ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde | 100.0 | |
| cd07089 | 459 | ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric | 100.0 | |
| PRK11903 | 521 | aldehyde dehydrogenase; Provisional | 100.0 | |
| TIGR01238 | 500 | D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07148 | 455 | ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si | 100.0 | |
| PRK09407 | 524 | gabD2 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| cd07150 | 451 | ALDH_VaniDH_like Pseudomonas putida vanillin dehyd | 100.0 | |
| PRK11563 | 675 | bifunctional aldehyde dehydrogenase/enoyl-CoA hydr | 100.0 | |
| cd07125 | 518 | ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d | 100.0 | |
| cd07109 | 454 | ALDH_AAS00426 Uncharacterized Saccharopolyspora sp | 100.0 | |
| cd07090 | 457 | ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty | 100.0 | |
| cd07082 | 473 | ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat | 100.0 | |
| cd07114 | 457 | ALDH_DhaS Uncharacterized Candidatus pelagibacter | 100.0 | |
| cd07101 | 454 | ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi | 100.0 | |
| PLN02174 | 484 | aldehyde dehydrogenase family 3 member H1 | 100.0 | |
| cd07106 | 446 | ALDH_AldA-AAD23400 Streptomyces aureofaciens putat | 100.0 | |
| cd07126 | 489 | ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de | 100.0 | |
| cd07108 | 457 | ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a | 100.0 | |
| cd07092 | 450 | ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g | 100.0 | |
| cd07099 | 453 | ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di | 100.0 | |
| cd07094 | 453 | ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende | 100.0 | |
| cd07102 | 452 | ALDH_EDX86601 Uncharacterized aldehyde dehydrogena | 100.0 | |
| cd07103 | 451 | ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald | 100.0 | |
| cd07152 | 443 | ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen | 100.0 | |
| cd07147 | 452 | ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1 | 100.0 | |
| cd07098 | 465 | ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and | 100.0 | |
| cd07146 | 451 | ALDH_PhpJ Streptomyces putative phosphonoformaldeh | 100.0 | |
| cd07093 | 455 | ALDH_F8_HMSADH Human aldehyde dehydrogenase family | 100.0 | |
| PRK11904 | 1038 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07100 | 429 | ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi | 100.0 | |
| cd07095 | 431 | ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde | 100.0 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 100.0 | |
| cd07149 | 453 | ALDH_y4uC Uncharacterized ALDH (y4uC) with similar | 100.0 | |
| cd07135 | 436 | ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde | 100.0 | |
| PLN02203 | 484 | aldehyde dehydrogenase | 100.0 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| TIGR02288 | 551 | PaaN_2 phenylacetic acid degradation protein paaN. | 100.0 | |
| cd07104 | 431 | ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen | 100.0 | |
| cd07105 | 432 | ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l | 100.0 | |
| PRK10090 | 409 | aldehyde dehydrogenase A; Provisional | 100.0 | |
| PTZ00381 | 493 | aldehyde dehydrogenase family protein; Provisional | 100.0 | |
| cd07137 | 432 | ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m | 100.0 | |
| cd07136 | 449 | ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr | 100.0 | |
| cd07127 | 549 | ALDH_PAD-PaaZ Phenylacetic acid degradation protei | 100.0 | |
| cd07133 | 434 | ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l | 100.0 | |
| cd07134 | 433 | ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro | 100.0 | |
| cd07132 | 443 | ALDH_F3AB Aldehyde dehydrogenase family 3 members | 100.0 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 100.0 | |
| KOG2452 | 881 | consensus Formyltetrahydrofolate dehydrogenase [Nu | 100.0 | |
| cd07087 | 426 | ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl | 100.0 | |
| cd07081 | 439 | ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh | 100.0 | |
| cd07129 | 454 | ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr | 100.0 | |
| cd07084 | 442 | ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent | 100.0 | |
| KOG2454 | 583 | consensus Betaine aldehyde dehydrogenase [Energy p | 100.0 | |
| cd07078 | 432 | ALDH NAD(P)+ dependent aldehyde dehydrogenase fami | 100.0 | |
| cd07121 | 429 | ALDH_EutE Ethanolamine utilization protein EutE-li | 100.0 | |
| PRK15398 | 465 | aldehyde dehydrogenase EutE; Provisional | 100.0 | |
| cd07122 | 436 | ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr | 100.0 | |
| KOG2456 | 477 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| TIGR02518 | 488 | EutH_ACDH acetaldehyde dehydrogenase (acetylating) | 100.0 | |
| KOG2455 | 561 | consensus Delta-1-pyrroline-5-carboxylate dehydrog | 100.0 | |
| PRK13805 | 862 | bifunctional acetaldehyde-CoA/alcohol dehydrogenas | 100.0 | |
| cd07079 | 406 | ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu | 100.0 | |
| PRK00197 | 417 | proA gamma-glutamyl phosphate reductase; Provision | 100.0 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 100.0 | |
| KOG2453 | 507 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| TIGR00407 | 398 | proA gamma-glutamyl phosphate reductase. The prosi | 100.0 | |
| cd07077 | 397 | ALDH-like NAD(P)+-dependent aldehyde dehydrogenase | 100.0 | |
| cd06534 | 367 | ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s | 100.0 | |
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 100.0 | |
| cd07080 | 422 | ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac | 100.0 | |
| COG0014 | 417 | ProA Gamma-glutamyl phosphate reductase [Amino aci | 99.9 | |
| KOG4165 | 433 | consensus Gamma-glutamyl phosphate reductase [Amin | 99.8 | |
| PF05893 | 399 | LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086 | 99.67 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 98.75 | |
| KOG2449 | 157 | consensus Methylmalonate semialdehyde dehydrogenas | 98.39 | |
| PF07368 | 215 | DUF1487: Protein of unknown function (DUF1487); In | 97.24 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 96.86 | |
| COG0141 | 425 | HisD Histidinol dehydrogenase [Amino acid transpor | 89.7 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 89.1 | |
| PF00815 | 412 | Histidinol_dh: Histidinol dehydrogenase; InterPro: | 88.43 | |
| PRK13769 | 368 | histidinol dehydrogenase; Provisional | 83.33 | |
| COG1438 | 150 | ArgR Arginine repressor [Transcription] | 80.41 |
| >PLN02466 aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-95 Score=764.33 Aligned_cols=449 Identities=80% Similarity=1.263 Sum_probs=425.2
Q ss_pred CcccchhhhhcccccCCCc-cccccCCCchhhhHHHHhhhhcccccccccccccCCCCCCCCCCCccCceecCEeeeCCC
Q 012658 1 MAARRIPLLLSRSFTSSSP-TLFSRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSAS 79 (459)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~G~~~~~~~ 79 (459)
||+||+|+|||||++++++ +++++|++++.+++.+ ||+| +.|++++++.+++++.+.++||||+|+.+.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~---~~~~~~~~~~~~~~~~~~~~~I~G~~~~~~~ 71 (538)
T PLN02466 1 MAARRISSLLSRSLSASSSALLRSRGRNGGRGRGIR------RFST---AAAAVEEPITPPVQVSYTQLLINGQFVDAAS 71 (538)
T ss_pred CCchHHHHHHHHHhhcccHHHhhhccccCCCCcccc------cccc---ccccccCcCCCccccccccceECCEEecCCC
Confidence 8999999999999977654 7888999999999999 9988 6577999999999999999999999998777
Q ss_pred CCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCCh
Q 012658 80 GKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPF 159 (459)
Q Consensus 80 ~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~ 159 (459)
+++++++||+||+++++++.++.+|+++|++.|++||+.+.|++++..+|.++|+++++.|++|.++|++++++|+|||+
T Consensus 72 ~~~~~v~~P~tg~~i~~v~~~~~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~GK~~ 151 (538)
T PLN02466 72 GKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLEKHNDELAALETWDNGKPY 151 (538)
T ss_pred CCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCcCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 89999999999999999999999999999999999998556999999999999999999999999999999999999999
Q ss_pred hhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecC
Q 012658 160 EQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239 (459)
Q Consensus 160 ~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps 239 (459)
.++...|+..+++.++||+.++++..+...+...+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 152 ~~a~~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~l~~~~i~pALaaGN~VVlKPs 231 (538)
T PLN02466 152 EQSAKAELPMFARLFRYYAGWADKIHGLTVPADGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 231 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEecceEEEEECCCchHHHHHHHHHhHHHHcCCEEEeECC
Confidence 98876799999999999999998887766654444567889999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCc
Q 012658 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSP 319 (459)
Q Consensus 240 ~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p 319 (459)
+.+|+++..++++|.++|+|+|+||+|+|++.+.+..|.+|++||.|.||||+++|+.|++.+++.+++|+++|+|||||
T Consensus 232 ~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~~~aa~~~l~pv~lElGGknp 311 (538)
T PLN02466 232 EQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAKSNLKPVTLELGGKSP 311 (538)
T ss_pred CCCcHHHHHHHHHHHhcCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHhcCCCcEEEEcCCCCe
Confidence 99999999999999999999999999999777889999999999999999999999999999885478999999999999
Q ss_pred EEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHH
Q 012658 320 FIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKIL 399 (459)
Q Consensus 320 ~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~ 399 (459)
+||++|||+|.|++.+++++|.|+||.|+++++||||+++||+|+++|++++.++++|+|+++++++||+++..+++++.
T Consensus 312 ~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~ 391 (538)
T PLN02466 312 FIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRVVGDPFKKGVEQGPQIDSEQFEKIL 391 (538)
T ss_pred EEEcCCCCHHHHHHHHHHHHHhhcCCCcCcCcEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCCccCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 400 KYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 400 ~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 392 ~~v~~a~~~Ga~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~d~ 450 (538)
T PLN02466 392 RYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDL 450 (538)
T ss_pred HHHHHHHHCCCEEEecCCcCCCCceEEEEEEEecCCCCCchhcCCccCcEEEEEEeCCH
Confidence 99999999999999999865557899999999999999999999999999999999985
|
|
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-96 Score=730.48 Aligned_cols=398 Identities=59% Similarity=0.935 Sum_probs=386.6
Q ss_pred CCCCcc-CceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHH
Q 012658 61 VKVDYT-QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADL 139 (459)
Q Consensus 61 ~~~~~~-~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~ 139 (459)
..+..+ ++||||+|+++.++++|+++||.||+++++++.++.+||+.|+++|++||+.+.|++++..+|..+|++++++
T Consensus 15 ~~~~~~~~lfin~e~~~~~s~kt~~~~nP~tg~~i~~v~~~~~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~~Adl 94 (501)
T KOG2450|consen 15 EEIQPTLGLFINGEFVDSVSGKTFPVVNPATGEVIAKVAEATEEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRKLADL 94 (501)
T ss_pred ccccchhheeecCeeecccCCceeeeecCCCCCeEEEeccccHHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHHHHHH
Confidence 344454 8999999999999999999999999999999999999999999999999996679999999999999999999
Q ss_pred HHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHh
Q 012658 140 LERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLM 219 (459)
Q Consensus 140 l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 219 (459)
++++++.|+.++++++|||+.+++..++..+++.+|||++|++++++...+.+.....|+.++|+||++.|.|||||+.+
T Consensus 95 ie~~~~~lA~~E~~d~GKp~~~a~~~Dl~~~~~~~ry~ag~ad~~~~~~~~~~~~~~~yt~~eP~GV~G~I~pWN~Pllm 174 (501)
T KOG2450|consen 95 IEQDADVLAALEVLDNGKPYPEALVSDLPPAIDCFRYYAGWADKIHGSTIPTDGEFFAYTRREPIGVCGQIIPWNFPLLM 174 (501)
T ss_pred HHhhhHHHhhhcccccCCcchhhhhcCchhhhhHHHhhccchhhcccccCCCCCceEEEecCCcceeeeEeccCchHHHH
Confidence 99999999999999999999999878999999999999999999999888888889999999999999999999999999
Q ss_pred hHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHH
Q 012658 220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299 (459)
Q Consensus 220 ~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 299 (459)
..|+++|||++||+||+||++++|++++.+++++.++|+|+|++|+|+|.|...+.+|.+|++|++|+||||+.+|+.|+
T Consensus 175 ~awKlaPALa~GNtvV~Kpae~tplsal~~~~l~~eaG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I~ 254 (501)
T KOG2450|consen 175 QAWKLAPALAAGNTVVLKPAEQTPLTALYLASLCKEAGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKEIM 254 (501)
T ss_pred HHHhhhhHHhhCcEEEecCCCCCCchHHHHHHHhHHhcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHh-hccCC
Q 012658 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK-RVVGD 378 (459)
Q Consensus 300 ~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~-~~vG~ 378 (459)
+.++++++|||++|||||+|.||++|||+|.|++.++.+.|+|+||+|++.+|+|||+++||+|+++++++.++ +++||
T Consensus 255 ~aaa~~n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iydefv~~~v~~a~~~~kvGd 334 (501)
T KOG2450|consen 255 EAAAESNLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIYDEFVEKFVAAAKKKLKVGD 334 (501)
T ss_pred hhhhhcCCceeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechHHHHHHHHHHHHHhcccccCC
Confidence 99998889999999999999999999999999999999999999999999999999999999999999999966 99999
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 379 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 379 p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
|+++++.+||++++.|++||.+||+.++++||++++||.+.+++||||+||||.+|+++|.|++|||||||+.|+++++.
T Consensus 335 P~~~~~~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~t~ 414 (501)
T KOG2450|consen 335 PFDEGTEQGPQISKTQYEKILGYIESGKKEGATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFKTE 414 (501)
T ss_pred CCCcccccccccCHHHHHHHHHHHHHHHhcCCEEEecCcccCCCceEECCeeccCCChhhhhhHhhccCceEEEEecCcH
Confidence 99999999999999999999999999999999999999888889999999999999999999999999999999998763
|
|
| >KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-91 Score=663.90 Aligned_cols=390 Identities=38% Similarity=0.626 Sum_probs=374.1
Q ss_pred ccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 012658 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (459)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~ 144 (459)
..+.||+|+|+++.++++|++.||.+|++|+.+++++.+|.+.||+.|.+||. .|+.++..+|.++|++|.++|.+|.
T Consensus 23 ~~~~~igGkWv~s~~~~tF~V~nPa~geii~~V~~~~V~e~~kAI~aA~EaF~--s~~~~takeRs~lLrkwy~Li~en~ 100 (503)
T KOG2451|consen 23 RAQSYIGGKWVDSPDNKTFEVDNPANGEIIGKVADMTVEEAEKAIDAAYEAFK--SYRNLTAKERSALLRKWYELIMENK 100 (503)
T ss_pred chhccccceeeccCCCCeeeccCCCccchhhcccCCcHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHhch
Confidence 55789999999998999999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCC-CCceEEEEEccceEEEEEcCCCchHHhhHHH
Q 012658 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (459)
Q Consensus 145 ~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (459)
|+|++++++|+|||+.++. +|+.-+..+++||+++++++.+...+.. ......+.+||+||+++|+|||||..+...+
T Consensus 101 ddLa~iiTlE~GKpL~eA~-gEv~y~a~f~eWyAeEA~RvyGdii~s~~~~rr~i~ikQPvGV~alItPWNFP~AMItRK 179 (503)
T KOG2451|consen 101 DDLATIITLENGKPLGEAK-GEVAYSAAFFEWYAEEARRVYGDIIPSLNPNRRLIVIKQPVGVVALITPWNFPAAMITRK 179 (503)
T ss_pred HHHHHHHhhhcCCchhhcc-ceeehhHHHHHHHHHHhhhhhccccCCCCCCceEEEEeccceeEEEecCcCChHHHHHhH
Confidence 9999999999999999975 6999999999999999999999887643 4667789999999999999999999999999
Q ss_pred HHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCC---ChhHHHHHHcCCCccEEEeeCChHHHHHHHH
Q 012658 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY---GPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (459)
Q Consensus 224 l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~---~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 300 (459)
..+||++||+||+||++.||++++.++++.++||+|+|++|+++++ ..++++.|+.+|+|++|.||||+.+|+.++.
T Consensus 180 ~gAALAaGCTvVvkPs~~TPlsaLala~lA~~AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VGKiL~~ 259 (503)
T KOG2451|consen 180 AGAALAAGCTVVVKPSEDTPLSALALAKLAEEAGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVGKILMA 259 (503)
T ss_pred HHHHHhcCceEEEccCCCCchHHHHHHHHHHHcCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHHHHHHH
Confidence 9999999999999999999999999999999999999999999963 4578999999999999999999999999999
Q ss_pred HHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCC
Q 012658 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380 (459)
Q Consensus 301 ~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~ 380 (459)
+++. +.|++.+||||+.|+||++|||+|+|++..+..+|.++||.|.+++|+|||+++||+|+++|.++++++++||.+
T Consensus 260 qsas-tvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iyD~Fv~~l~e~vkkl~vGdG~ 338 (503)
T KOG2451|consen 260 QSAS-TVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIYDKFVSKLAEAVKKLKVGDGL 338 (503)
T ss_pred hhhh-hhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhHHHHHHHHHHHHHheeccCCC
Confidence 9987 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccC-CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 381 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 381 ~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
|+++.+||+|+..+.+|++.+++||+.+||++++||+... ..++|++|||+.+|+++|.+.+||+|||+.+|++++|.
T Consensus 339 ~~~tt~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kFdte 417 (503)
T KOG2451|consen 339 DPGTTQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERSELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKFDTE 417 (503)
T ss_pred CCCCccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEccccCCccccceEeecCCccceeeccccccccceeeeeCCH
Confidence 9999999999999999999999999999999999998544 44599999999999999999999999999999999873
|
|
| >COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-86 Score=690.01 Aligned_cols=383 Identities=49% Similarity=0.788 Sum_probs=366.1
Q ss_pred CceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 012658 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (459)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~ 146 (459)
++||||+|++..+ +++++||.||+++++++.++.+|+++|+++|+.+|+ .|+++++.+|.++|++++++|++|.++
T Consensus 2 ~~~i~g~~~~~~~--~~~~~nP~tg~~i~~~~~a~~~dv~~Av~aA~~a~~--~W~~~~~~eR~~iL~~~a~~l~~~~~e 77 (472)
T COG1012 2 KLLIDGEWVDGAS--TIEVINPATGEVIATVPAATAEDVDAAVAAARAAFE--AWSRLSAEERAAILRRIADLLEARAEE 77 (472)
T ss_pred CccCCCeecCCCC--ceeeeCCCCCCEEeeecCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 6799999998644 899999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHH
Q 012658 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 226 (459)
Q Consensus 147 l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 226 (459)
|++++++|+|||+.++.. |+..+++.++||++.++++.+...+...+...++.++|+|||++|+|||||+.+.+|+++|
T Consensus 78 la~~~~~e~Gk~i~ea~~-ei~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~ap 156 (472)
T COG1012 78 LAALITLETGKPISEARG-EIARAADFIRYYAEEARRLEGETIPTDKGSKALVRREPLGVVGAITPWNFPLALAAWKLAP 156 (472)
T ss_pred HHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccCCCCCcceEEEeecceEEEEECCCCCHHHHHHhhHHH
Confidence 999999999999999875 6999999999999999988777655444778899999999999999999999999999999
Q ss_pred HHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcC
Q 012658 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306 (459)
Q Consensus 227 ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~ 306 (459)
||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|.+.+.++.|..||+|++|.||||+++|+.|++.+++ +
T Consensus 157 ALaaGntVV~KPse~tp~sa~~l~~~~~~aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~~Aa~-~ 235 (472)
T COG1012 157 ALAAGNTVVLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAA-N 235 (472)
T ss_pred HHHcCCEEEEECcccCcHHHHHHHHHHHHhCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHHHHhh-c
Confidence 999999999999999999999999999999999999999999877799999999999999999999999999999997 9
Q ss_pred CCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHh-hccCCCCCCCCc
Q 012658 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK-RVVGDPFKGGIQ 385 (459)
Q Consensus 307 ~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~-~~vG~p~~~~~~ 385 (459)
+||+++|||||||+||++|||+|.|++.+++++|+|+||.|++++|+|||+++||+|+++|.++ ++ +++|||+|+.++
T Consensus 236 ~k~~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~-~~~l~~Gd~~d~~t~ 314 (472)
T COG1012 236 LKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVAR-AASLKVGDPLDPSTD 314 (472)
T ss_pred CCcEEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhHHHHHHHHHHH-HhcCCCCCCCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999 65 899999999999
Q ss_pred ccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 386 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 386 ~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+||++++++++++.++|++++++|+.+++||.. .. |+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 315 ~Gpli~~~~~~~v~~~i~~a~~~G~~~~~Gg~~-~~-g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~~ 385 (472)
T COG1012 315 LGPLISEEQLDRVEGYIEDAVAEGARLLAGGKR-PG-GYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDE 385 (472)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcC-CC-CeEECCEEEecCCCCChhhhccccCCceEEEEeCCH
Confidence 999999999999999999999999999999973 33 999999999999999999999999999999999985
|
|
| >PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-86 Score=689.84 Aligned_cols=388 Identities=36% Similarity=0.625 Sum_probs=367.9
Q ss_pred CceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 012658 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (459)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~ 146 (459)
++||||+|+.+.++.+++++||+||+++++++.++.+|+++|++.|++||+ .|++++..+|.++|+++++.|+++.++
T Consensus 12 ~~~i~G~~~~~~~~~~~~v~nP~tg~~v~~~~~~~~~~v~~av~~A~~a~~--~W~~~~~~~R~~~L~~~a~~l~~~~~e 89 (482)
T PRK11241 12 QALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKERANILRRWFNLMMEHQDD 89 (482)
T ss_pred cceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 589999999766788999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCC-CCceEEEEEccceEEEEEcCCCchHHhhHHHHH
Q 012658 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225 (459)
Q Consensus 147 l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 225 (459)
|++++++|+|||+.++. .|+..+++.++|++.++++..+...+.. .+...+.+++|+|||++|+|||||+...+++++
T Consensus 90 la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 168 (482)
T PRK11241 90 LARLMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAG 168 (482)
T ss_pred HHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEeeceEEEEECCCcChHHHHHHHHH
Confidence 99999999999999876 5999999999999998887665544432 234567889999999999999999999999999
Q ss_pred HHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhc
Q 012658 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305 (459)
Q Consensus 226 ~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~ 305 (459)
+||++||+||+|||+.+|+++..+.+++.++|+|+|+||+|+|++.+.+..|++|++|+.|.||||+++|+.|++.+++
T Consensus 169 ~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~~~aa~- 247 (482)
T PRK11241 169 PALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAK- 247 (482)
T ss_pred HHHHhCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-
Confidence 9999999999999999999999999999999999999999999777889999999999999999999999999999987
Q ss_pred CCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCc
Q 012658 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 385 (459)
Q Consensus 306 ~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~ 385 (459)
+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++++++
T Consensus 248 ~l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~ 327 (482)
T PRK11241 248 DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLEKGVT 327 (482)
T ss_pred cCCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 386 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 386 ~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+||++++.+++++.++|++++++||++++||.....+|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 328 ~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~~ 400 (482)
T PRK11241 328 IGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDE 400 (482)
T ss_pred cCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCCCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCCH
Confidence 9999999999999999999999999999999754346899999999999999999999999999999999985
|
|
| >PLN02766 coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-85 Score=689.25 Aligned_cols=396 Identities=55% Similarity=0.908 Sum_probs=372.8
Q ss_pred CCccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHH
Q 012658 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (459)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~ 142 (459)
+...++||||+|+.+.++.+++++||+||+++++++.++.+|++++++.|++||+.+.|+.++..+|.++|+++++.|++
T Consensus 18 ~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~ 97 (501)
T PLN02766 18 IKFTKLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPWPRMSGFERGRIMMKFADLIEE 97 (501)
T ss_pred cccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHH
Confidence 44457899999998767789999999999999999999999999999999999985569999999999999999999999
Q ss_pred cHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHH
Q 012658 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (459)
Q Consensus 143 ~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (459)
+.++|++++++|+|||+.++...|+..+++.++|++..+++..+...+...+...+..++|+|||++|+|||||+...++
T Consensus 98 ~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 177 (501)
T PLN02766 98 HIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGETLKMSRQLQGYTLKEPIGVVGHIIPWNFPSTMFFM 177 (501)
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCceEEEEeccceEEEEECCCCChHHHHHH
Confidence 99999999999999999887656999999999999998887766544433345577889999999999999999999999
Q ss_pred HHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHH
Q 012658 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (459)
Q Consensus 223 ~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~ 302 (459)
++++||++||+||+|||+.+|+++..+++++.++|+|+|+||+|+|++.+.+..|..||+||.|.||||+.+|+.|++.+
T Consensus 178 ~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~~~G~~i~~~a 257 (501)
T PLN02766 178 KVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQAA 257 (501)
T ss_pred HHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHhcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998788899999999999999999999999999998
Q ss_pred HhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCC
Q 012658 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 382 (459)
Q Consensus 303 a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~ 382 (459)
+..+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++
T Consensus 258 a~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~d~f~~~l~~~~~~l~~G~p~~~ 337 (501)
T PLN02766 258 ATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGDPFDP 337 (501)
T ss_pred hhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCCCC
Confidence 84489999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 383 ~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++++||++++.+++++.++|++++++||++++||.....+|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 338 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~ 413 (501)
T PLN02766 338 RARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTV 413 (501)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhCCccCceEEEEEeCCH
Confidence 9999999999999999999999999999999999764456899999999999999999999999999999999985
|
|
| >PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-85 Score=691.77 Aligned_cols=389 Identities=30% Similarity=0.445 Sum_probs=366.6
Q ss_pred CccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHc
Q 012658 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (459)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~ 143 (459)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++|++.|++||+ .|++++..+|.++|+++++.|++|
T Consensus 112 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eR~~iL~k~a~~L~~~ 189 (604)
T PLN02419 112 PRVPNLIGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFP--LWRNTPITTRQRVMLKFQELIRKN 189 (604)
T ss_pred cccceeECCEEecCCCCceEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHh
Confidence 355789999999876678899999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCC-CCCceEEEEEccceEEEEEcCCCchHHhhHH
Q 012658 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (459)
Q Consensus 144 ~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (459)
.++|++++++|+|||+.++. .|+..+++.++||+++++...+...+. ..+...++.++|+|||++|+|||||+...++
T Consensus 190 ~~ela~~~~~E~GKp~~ea~-~EV~~~i~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~reP~GVV~~I~PwNfPl~l~~~ 268 (604)
T PLN02419 190 MDKLAMNITTEQGKTLKDSH-GDIFRGLEVVEHACGMATLQMGEYLPNVSNGVDTYSIREPLGVCAGICPFNFPAMIPLW 268 (604)
T ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCcccccCCCccceEEecCccEEEEECCCccHHHHHHH
Confidence 99999999999999999986 599999999999999988776654442 2344567899999999999999999999999
Q ss_pred HHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHH
Q 012658 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (459)
Q Consensus 223 ~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~ 302 (459)
++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|++ +.+..|+.|++|+.|.||||+.+|+.|++.+
T Consensus 269 ~iapALaAGNtVVlKPSe~tp~ta~~l~~l~~eAGlP~GvvnvV~G~~-~~~~~L~~~~~Vd~V~FTGSt~vG~~I~~~A 347 (604)
T PLN02419 269 MFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGTN-DTVNAICDDEDIRAVSFVGSNTAGMHIYARA 347 (604)
T ss_pred HHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCcCcceEEEEeCCh-HHHHHHHhCCCCCEEEEeCChHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999954 6788999999999999999999999999998
Q ss_pred HhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCC
Q 012658 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 382 (459)
Q Consensus 303 a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~ 382 (459)
++ +++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||++ +|+|+++|+++++++++|+|.|+
T Consensus 348 a~-~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv~V~~~-~d~f~e~l~~~~~~l~vG~p~d~ 425 (604)
T PLN02419 348 AA-KGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGD-AKSWEDKLVERAKALKVTCGSEP 425 (604)
T ss_pred hc-cCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEEEEeCc-HHHHHHHHHHHHHHhccCCCCCC
Confidence 87 89999999999999999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred CCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCccc----CCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL----GAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 383 ~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++++||++++.+++++.++|++++++||++++||... ...|+|++|||+.++++||.+++||+||||++|++|+|+
T Consensus 426 ~t~~GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eEiFGPVl~V~~~~~~ 505 (604)
T PLN02419 426 DADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSF 505 (604)
T ss_pred CCCccCCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCCCcCCEEEEEecCCH
Confidence 9999999999999999999999999999999999642 136899999999999999999999999999999999985
|
|
| >cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-84 Score=676.99 Aligned_cols=390 Identities=44% Similarity=0.785 Sum_probs=368.6
Q ss_pred CceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 012658 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (459)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~ 146 (459)
++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++||..+.|++++..+|.++|+++++.|+++.++
T Consensus 7 ~~~I~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~e 86 (486)
T cd07140 7 QLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEHQEE 86 (486)
T ss_pred CceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 68999999987678899999999999999999999999999999999999844699999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCC----CCceEEEEEccceEEEEEcCCCchHHhhHH
Q 012658 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (459)
Q Consensus 147 l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (459)
|++++++|+|||+.++...|+..+++.++||+.++++..+...+.. .+...+..++|+|||++|+|||||+...++
T Consensus 87 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~~~~ 166 (486)
T cd07140 87 LATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAW 166 (486)
T ss_pred HHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEeeccceEEEEcCCchHHHHHHH
Confidence 9999999999999988767999999999999999888766544421 223467889999999999999999999999
Q ss_pred HHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHH
Q 012658 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (459)
Q Consensus 223 ~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~ 302 (459)
++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|++.+.+..|..|++|+.|.||||+.+|+.|++.+
T Consensus 167 ~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 246 (486)
T cd07140 167 KMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKSC 246 (486)
T ss_pred HHHHHHHhCCEEEEECCccCcHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999997778899999999999999999999999999998
Q ss_pred HhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCC
Q 012658 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 382 (459)
Q Consensus 303 a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~ 382 (459)
+..+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++
T Consensus 247 a~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~~~f~~~l~~~~~~l~~g~p~~~ 326 (486)
T cd07140 247 AVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGDPLDR 326 (486)
T ss_pred HhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhCCccCCCCC
Confidence 85478999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecC
Q 012658 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGE 456 (459)
Q Consensus 383 ~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~ 456 (459)
++++||++++.+++++.++|++++++||++++||...+..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 327 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~ 400 (486)
T cd07140 327 STDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFD 400 (486)
T ss_pred CCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEcC
Confidence 99999999999999999999999999999999997644568999999999999999999999999999999998
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. |
| >cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-84 Score=676.99 Aligned_cols=395 Identities=75% Similarity=1.241 Sum_probs=372.8
Q ss_pred CccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHc
Q 012658 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (459)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~ 143 (459)
++.++||||+|+.+.++.+++++||+||+++++++.++.+|++++++.|++||+.+.|++++..+|.++|+++++.|+++
T Consensus 2 ~~~~~~i~g~~~~~~~~~~~~v~~P~t~~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 81 (476)
T cd07142 2 KHTKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKH 81 (476)
T ss_pred CcccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHHHHHHHHHHh
Confidence 46678999999987677899999999999999999999999999999999999844599999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHH
Q 012658 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (459)
Q Consensus 144 ~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (459)
.++|++++++|+|||+.++...|+..+++.++|++.++++..+...+...+...+..++|+|||++|+|||||+...+++
T Consensus 82 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~ 161 (476)
T cd07142 82 ADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMTLPADGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWK 161 (476)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEeceeeEEEECCCccHHHHHHHH
Confidence 99999999999999999876669999999999999998887766555333445678999999999999999999999999
Q ss_pred HHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHH
Q 012658 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (459)
Q Consensus 224 l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a 303 (459)
+++||++||+||+|||+.+|+++..++++|.++|+|+|++|+|+|++.+.+..|..|++++.|.||||+.+|+.|++.++
T Consensus 162 i~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~~~aa 241 (476)
T cd07142 162 VGPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAA 241 (476)
T ss_pred HHHHHHcCCEEEEECCCcccHHHHHHHHHHHHcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999977778999999999999999999999999999988
Q ss_pred hcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCC
Q 012658 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (459)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~ 383 (459)
+.+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.+++.++++|+|.+++
T Consensus 242 ~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 321 (476)
T cd07142 242 KSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPFRKG 321 (476)
T ss_pred HcCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 54789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 384 ~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++||++++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 322 ~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~ 396 (476)
T cd07142 322 VEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTV 396 (476)
T ss_pred CcCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCCCCeeEccEEeecCCCCChhhhCCccCceEEEEeeCCH
Confidence 999999999999999999999999999999999765557899999999999999999999999999999999985
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. |
| >TIGR03374 ABALDH 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-83 Score=668.44 Aligned_cols=387 Identities=37% Similarity=0.621 Sum_probs=364.4
Q ss_pred CceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 012658 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (459)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~ 146 (459)
++||||+|+.+ ++.+++++||.||+++++++.++.+|++++++.|++||. .|++++..+|.++|++++++|+++.++
T Consensus 3 ~~~i~g~~~~~-~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e 79 (472)
T TIGR03374 3 KLLINGELVSG-EGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFA--EWGQTTPKARAECLLKLADVIEENAQV 79 (472)
T ss_pred CceECCEEecC-CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 67999999975 578899999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCC-CCCceEEEEEccceEEEEEcCCCchHHhhHHHHH
Q 012658 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225 (459)
Q Consensus 147 l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 225 (459)
|++++++|+|||+.++...|+..+++.++||+..++.+.+...+. ..+...++.++|+|||++|+|||||+.+.+++++
T Consensus 80 la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~ 159 (472)
T TIGR03374 80 FAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLA 159 (472)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccCCCceEEEEEecceEEEEECCCCchHHHHHHHHH
Confidence 999999999999988766699999999999998887665542221 1244568899999999999999999999999999
Q ss_pred HHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhc
Q 012658 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305 (459)
Q Consensus 226 ~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~ 305 (459)
+||++||+||+|||+.+|.++..+++++.++ +|+|++|+++|++.+.+..|..|++||.|.||||+++|+.|++.+++
T Consensus 160 ~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~- 237 (472)
T TIGR03374 160 PALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAP- 237 (472)
T ss_pred HHHhcCCEEEecCCCCCCHHHHHHHHHHHHh-CCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhh-
Confidence 9999999999999999999999999999985 99999999999777889999999999999999999999999999887
Q ss_pred CCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCc
Q 012658 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 385 (459)
Q Consensus 306 ~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~ 385 (459)
+++|+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|||||++++|+|+++|+++++++++|+|.+++++
T Consensus 238 ~~~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~ 317 (472)
T TIGR03374 238 SIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPDDESTE 317 (472)
T ss_pred cccceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCHHHHHHHHHHHHHHHhCC-CeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 386 QGPQIDSEQFEKILKYIRSGVDGG-AKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 386 ~Gpl~~~~~~~~i~~~i~~a~~~G-a~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+||+++..+++++.++|++++++| +++++||......|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 318 ~Gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~ 391 (472)
T TIGR03374 318 LGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDE 391 (472)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccCCCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECCH
Confidence 999999999999999999999999 7999999764446899999999999999999999999999999999985
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. |
| >cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-83 Score=668.39 Aligned_cols=388 Identities=39% Similarity=0.631 Sum_probs=365.3
Q ss_pred CceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCC-CCCCCHHHHHHHHHHHHHHHHHcHH
Q 012658 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP-WPRMTAYERSKIILRFADLLERHND 145 (459)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~-W~~~~~~~R~~iL~~~a~~l~~~~~ 145 (459)
.+||||+|+.+.++++++++||.||+++++++.++.+|++++++.|++||+ . |++++..+|.++|+++++.|+++.+
T Consensus 1 ~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~~w~~~~~~~R~~~L~~~a~~l~~~~~ 78 (477)
T cd07113 1 GHFIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFV--SAWAKTTPAERGRILLRLADLIEQHGE 78 (477)
T ss_pred CCeECCEEecCCCCCeEeeeCCCCCCEEEEEcCCCHHHHHHHHHHHHHHhH--hhhccCCHHHHHHHHHHHHHHHHHCHH
Confidence 368999999876678899999999999999999999999999999999998 5 9999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCC------CCCceEEEEEccceEEEEEcCCCchHHh
Q 012658 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA------DGPYHVQTLHEPIGVAGQIIPWNFPLLM 219 (459)
Q Consensus 146 ~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~------~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 219 (459)
+|++++++|+|||+.++...|+..+++.+++++.+++...+...+. ..+...+..++|+|||++|+|||||+..
T Consensus 79 ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~ 158 (477)
T cd07113 79 ELAQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMI 158 (477)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCCChHHHH
Confidence 9999999999999988765699999999999999888766544321 1234567899999999999999999999
Q ss_pred hHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHH
Q 012658 220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299 (459)
Q Consensus 220 ~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 299 (459)
.++++++||++||+||+|||+.+|+++..++++|.++|+|+|+||+|+|++. .+..|+.|++||.|.||||+++|+.|.
T Consensus 159 ~~~~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~aglP~gvv~~v~g~~~-~~~~L~~~~~v~~V~fTGS~~~G~~i~ 237 (477)
T cd07113 159 AVWKIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGA-VGAQLISHPDVAKVSFTGSVATGKKIG 237 (477)
T ss_pred HHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCcCCCcEEEEecCch-HHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999766 889999999999999999999999999
Q ss_pred HHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCC
Q 012658 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379 (459)
Q Consensus 300 ~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p 379 (459)
+.+++ +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 238 ~~aa~-~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 316 (477)
T cd07113 238 RQAAS-DLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSP 316 (477)
T ss_pred HHHHh-hcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHHHHHHHHHHHHHHhCCCCCC
Confidence 99987 89999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 380 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 380 ~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++++++||++++.+++++.++|++++++|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 317 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~ 395 (477)
T cd07113 317 MDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDE 395 (477)
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCCH
Confidence 9999999999999999999999999999999999999754446899999999999999999999999999999999985
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. |
| >PLN02278 succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-83 Score=669.63 Aligned_cols=389 Identities=40% Similarity=0.654 Sum_probs=368.5
Q ss_pred cCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 012658 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (459)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~ 145 (459)
.++||||+|+.+.++++++++||.||+++++++.++.+|++++++.|++|++ .|++++..+|.++|+++++.|+++.+
T Consensus 25 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ 102 (498)
T PLN02278 25 TQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFP--SWSKLTASERSKILRRWYDLIIANKE 102 (498)
T ss_pred ccceECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 3689999999866678999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCC-CCceEEEEEccceEEEEEcCCCchHHhhHHHH
Q 012658 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (459)
Q Consensus 146 ~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 224 (459)
+|++++++|+|||..++. .|+..+++.++|++..++...+...+.. .+...+..++|+|||++|+|||||+.+.++++
T Consensus 103 ~la~~~~~e~Gk~~~~a~-~Ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~i 181 (498)
T PLN02278 103 DLAQLMTLEQGKPLKEAI-GEVAYGASFLEYFAEEAKRVYGDIIPSPFPDRRLLVLKQPVGVVGAITPWNFPLAMITRKV 181 (498)
T ss_pred HHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEeecccEEEEECCCccHHHHHHHHH
Confidence 999999999999999976 5999999999999999887766544432 24456778999999999999999999999999
Q ss_pred HHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHh
Q 012658 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304 (459)
Q Consensus 225 ~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~ 304 (459)
++||++||+||+|||+.+|+++..|.++|.++|+|+|++|+|+|++.+.++.|+.|++|+.|+||||+++|+.|++.+++
T Consensus 182 ~~ALaaGN~VVlKps~~tp~~~~~l~~~l~eaglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~ 261 (498)
T PLN02278 182 GPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAAA 261 (498)
T ss_pred HHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCChhhHHHHhcCCCcCEEEEECcHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999777788999999999999999999999999999887
Q ss_pred cCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCC
Q 012658 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384 (459)
Q Consensus 305 ~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~ 384 (459)
+++|+++|+|||||+||++|||+|.|++.|++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++++
T Consensus 262 -~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~ 340 (498)
T PLN02278 262 -TVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFSKAVQKLVVGDGFEEGV 340 (498)
T ss_pred -cCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 385 ~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++||++++.+++++.++|++++++|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 341 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~v~~~~~~ 414 (498)
T PLN02278 341 TQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTE 414 (498)
T ss_pred cCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCceEeeEEEecCCCCChhhhCCCcCCEEEEEeeCCH
Confidence 99999999999999999999999999999999764446899999999999999999999999999999999985
|
|
| >cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-82 Score=667.51 Aligned_cols=398 Identities=59% Similarity=0.988 Sum_probs=374.4
Q ss_pred CCCCccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCC-CCCCCCHHHHHHHHHHHHHH
Q 012658 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADL 139 (459)
Q Consensus 61 ~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g-~W~~~~~~~R~~iL~~~a~~ 139 (459)
..+.+.++||||+|+.+.++.+++++||+||+++++++.++.+|++++++.|++||..+ .|++++..+|.++|+++++.
T Consensus 2 ~~~~~~~~~I~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L~~~a~~ 81 (481)
T cd07141 2 PEIKYTKIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADL 81 (481)
T ss_pred cccccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHH
Confidence 34667789999999987678899999999999999999999999999999999999742 69999999999999999999
Q ss_pred HHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHh
Q 012658 140 LERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLM 219 (459)
Q Consensus 140 l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 219 (459)
|+++.++|++++++|+|||..++...|+..+++.+++++.++++..+...+...+...+..++|+|||++|+|||||+..
T Consensus 82 l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~ 161 (481)
T cd07141 82 IERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKTIPMDGDFFTYTRHEPVGVCGQIIPWNFPLLM 161 (481)
T ss_pred HHHhHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEEeceeEEEEEccChhHHHH
Confidence 99999999999999999998766666999999999999999888877555433445578899999999999999999999
Q ss_pred hHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHH
Q 012658 220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299 (459)
Q Consensus 220 ~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 299 (459)
.++++++||++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|++.+.+..|..|++||.|.||||+.+|+.|+
T Consensus 162 ~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~ 241 (481)
T cd07141 162 AAWKLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQ 241 (481)
T ss_pred HHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999997778899999999999999999999999999
Q ss_pred HHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCC
Q 012658 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379 (459)
Q Consensus 300 ~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p 379 (459)
+.++..+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 242 ~~aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p 321 (481)
T cd07141 242 QAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGNP 321 (481)
T ss_pred HHhhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCC
Confidence 98875478999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 380 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 380 ~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++++++||++++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 322 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 400 (481)
T cd07141 322 FDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTI 400 (481)
T ss_pred CCCCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhccccCCeEEEEeeCCH
Confidence 9999999999999999999999999999999999999865557899999999999999999999999999999999985
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. |
| >PLN02315 aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-82 Score=664.51 Aligned_cols=387 Identities=26% Similarity=0.448 Sum_probs=363.0
Q ss_pred CccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHc
Q 012658 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (459)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~ 143 (459)
...++||||+|+. ++.+++++||.||+++++++.++.+|+++|++.|++||. .|++++..+|.++|+++++.|++|
T Consensus 19 ~~~~~~I~G~~~~--~~~~~~~~nP~t~~~i~~~~~a~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~ 94 (508)
T PLN02315 19 RNLGCYVGGEWRA--NGPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAK--IWMQVPAPKRGEIVRQIGDALRAK 94 (508)
T ss_pred cccCceECCEEec--CCCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhH
Confidence 3457899999985 467899999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCC-CCceEEEEEccceEEEEEcCCCchHHhhHH
Q 012658 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (459)
Q Consensus 144 ~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (459)
.++|++++++|+|||+.++. .|+..+++.++||++.++++.+...+.. .+...+..++|+|||++|+|||||+..+++
T Consensus 95 ~~~la~~~~~e~GK~~~~a~-~ev~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 173 (508)
T PLN02315 95 LDYLGRLVSLEMGKILAEGI-GEVQEIIDMCDFAVGLSRQLNGSIIPSERPNHMMMEVWNPLGIVGVITAFNFPCAVLGW 173 (508)
T ss_pred HHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceEEEEECCCcchHHHHHH
Confidence 99999999999999999985 6999999999999998887766544432 234556789999999999999999999999
Q ss_pred HHHHHHhcCCeEEeecCCCchHHHHH----HHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHH
Q 012658 223 KVGPALACGNTIVLKTAEQTPLSALY----VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 298 (459)
Q Consensus 223 ~l~~ALaaGN~VVlKps~~~p~~~~~----l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 298 (459)
++++||++||+||+|||+.+|+++.. +.++|.++|+|+|++|+++| +.+.+..|..|++++.|.||||+++|+.|
T Consensus 174 ~~~~ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g-~~~~~~~l~~~~~v~~v~fTGS~~~G~~v 252 (508)
T PLN02315 174 NACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCG-GAEIGEAIAKDTRIPLVSFTGSSKVGLMV 252 (508)
T ss_pred HHhHHHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecC-ChHHHHHHhcCCCCCEEEEECCHHHHHHH
Confidence 99999999999999999999999887 67888999999999999998 77889999999999999999999999999
Q ss_pred HHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCC
Q 012658 299 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 378 (459)
Q Consensus 299 ~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~ 378 (459)
++.++. +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|+
T Consensus 253 ~~~aa~-~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~ 331 (508)
T PLN02315 253 QQTVNA-RFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQVKIGD 331 (508)
T ss_pred HHHHHh-cCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhcCCCC
Confidence 998886 8899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 379 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 379 p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
|.++++++||+++..+++++.++|++++++||++++||...+.+|+|++|||+ +++++|.+++||+||||++|++|+|+
T Consensus 332 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl-~v~~~~~i~~eE~FGPVl~V~~~~~~ 410 (508)
T PLN02315 332 PLEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQPTIV-EISPDADVVKEELFGPVLYVMKFKTL 410 (508)
T ss_pred CCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEecEEE-ecCCCChHHhCCCcCCEEEEEEeCCH
Confidence 99999999999999999999999999999999999999754456899999999 69999999999999999999999985
|
|
| >PRK13252 betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-82 Score=665.82 Aligned_cols=390 Identities=40% Similarity=0.694 Sum_probs=368.5
Q ss_pred ccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 012658 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (459)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~ 144 (459)
+.++||||+|+.+.++++++++||.||+++++++.++.+|++++++.|++|+. .|+.++..+|.++|++++++|+++.
T Consensus 6 ~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (488)
T PRK13252 6 LQSLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQK--IWAAMTAMERSRILRRAVDILRERN 83 (488)
T ss_pred cccccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhH
Confidence 34789999999876788999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHH
Q 012658 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (459)
Q Consensus 145 ~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 224 (459)
++|++++++|+|||+.+++..|+..+++.+++++++++.+.+...+...+...+.+++|+|||++|+|||||+...++++
T Consensus 84 ~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~~~ 163 (488)
T PRK13252 84 DELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGEQIPLRGGSFVYTRREPLGVCAGIGAWNYPIQIACWKS 163 (488)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCceEEEEEeeeeEEEEECCCchHHHHHHHHH
Confidence 99999999999999998876699999999999999988776655443334567889999999999999999999999999
Q ss_pred HHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHh
Q 012658 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304 (459)
Q Consensus 225 ~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~ 304 (459)
++||++||+||+|||+.+|.++..|+++|.++|+|+|+||+|+|++. .+..|..|+++|.|.||||+++|+.|.+.++.
T Consensus 164 ~~ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~aglP~g~v~~v~g~~~-~~~~L~~~~~vd~V~fTGS~~~g~~i~~~aa~ 242 (488)
T PRK13252 164 APALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQGDGR-VGAWLTEHPDIAKVSFTGGVPTGKKVMAAAAA 242 (488)
T ss_pred HHHHhcCCeEEEeCCccCcHHHHHHHHHHHHcCcCcccEEEEecCcH-HHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999998665 88999999999999999999999999998887
Q ss_pred cCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCC
Q 012658 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384 (459)
Q Consensus 305 ~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~ 384 (459)
+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++
T Consensus 243 -~l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 321 (488)
T PRK13252 243 -SLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIGDPMDPAT 321 (488)
T ss_pred -cCCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 7999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccC----CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 385 ~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++||++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 322 ~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~ 399 (488)
T PRK13252 322 NFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDE 399 (488)
T ss_pred cccccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEeeCCH
Confidence 999999999999999999999999999999996432 35899999999999999999999999999999999985
|
|
| >PLN02467 betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-82 Score=663.20 Aligned_cols=392 Identities=42% Similarity=0.691 Sum_probs=368.7
Q ss_pred CCccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhc-----cCCCCCCCCHHHHHHHHHHHH
Q 012658 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAF-----DEGPWPRMTAYERSKIILRFA 137 (459)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~-----~~g~W~~~~~~~R~~iL~~~a 137 (459)
+...++||||+|+.+.++++++++||+||+++++++.++.+|+++|++.|++|| . .|++++..+|.++|++++
T Consensus 5 ~~~~~~~I~g~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~dv~~av~~A~~a~~~~~~~--~W~~~~~~~R~~~L~~~a 82 (503)
T PLN02467 5 VPRRQLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGK--DWARTTGAVRAKYLRAIA 82 (503)
T ss_pred cCccCceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcccc--hhhcCCHHHHHHHHHHHH
Confidence 334478999999987678899999999999999999999999999999999999 7 899999999999999999
Q ss_pred HHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCccc---CCC-CCceEEEEEccceEEEEEcCC
Q 012658 138 DLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA---PAD-GPYHVQTLHEPIGVAGQIIPW 213 (459)
Q Consensus 138 ~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~---~~~-~~~~~~~~~~P~GVv~~i~p~ 213 (459)
++|+++.++|++++++|+|||+.++. .|+..+++.++||+.+++++.+... ... .+...++.++|+|||++|+||
T Consensus 83 ~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~Pw 161 (503)
T PLN02467 83 AKITERKSELAKLETLDCGKPLDEAA-WDMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPW 161 (503)
T ss_pred HHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCC
Confidence 99999999999999999999999987 5999999999999999888765432 111 234578899999999999999
Q ss_pred CchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChH
Q 012658 214 NFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 293 (459)
Q Consensus 214 n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~ 293 (459)
|||+...++++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+|+|++.+.++.|..|++|+.|.||||+.
T Consensus 162 N~P~~~~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~eag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~ 241 (503)
T PLN02467 162 NYPLLMATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTA 241 (503)
T ss_pred ChHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHcCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHH
Confidence 99999999999999999999999999999999999999999999999999999998778899999999999999999999
Q ss_pred HHHHHHHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHh
Q 012658 294 TGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK 373 (459)
Q Consensus 294 ~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~ 373 (459)
+|+.|++.++. ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++
T Consensus 242 ~g~~v~~~aa~-~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~ 320 (503)
T PLN02467 242 TGRKIMTAAAQ-MVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAKN 320 (503)
T ss_pred HHHHHHHHHhc-cCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHHHHHHHHHHHHHHh
Confidence 99999999887 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccC--CCCceEecEEEeeCCCCCCCcCcCCCcceEE
Q 012658 374 RVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKVLILISPASISPNILH 451 (459)
Q Consensus 374 ~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~ 451 (459)
+++|+|.++++++||++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++
T Consensus 321 l~~g~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~ 400 (503)
T PLN02467 321 IKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLC 400 (503)
T ss_pred cCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHhhCCCCCceEE
Confidence 99999999999999999999999999999999999999999997532 3589999999999999999999999999999
Q ss_pred EEecCCC
Q 012658 452 TFNGENF 458 (459)
Q Consensus 452 v~~~~~~ 458 (459)
|++|+|+
T Consensus 401 v~~~~~~ 407 (503)
T PLN02467 401 VKTFSTE 407 (503)
T ss_pred EEeeCCH
Confidence 9999985
|
|
| >cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-82 Score=661.23 Aligned_cols=388 Identities=43% Similarity=0.732 Sum_probs=366.7
Q ss_pred CceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 012658 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (459)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~ 146 (459)
++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++||. .|++++..+|.++|+++++.|++|.++
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~ 79 (475)
T cd07117 2 GLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFK--TWRKTTVAERANILNKIADIIDENKEL 79 (475)
T ss_pred CceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHH
Confidence 579999999876778999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHH
Q 012658 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 226 (459)
Q Consensus 147 l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 226 (459)
|++++++|+|||+.++...|+..+++.++||+.++....+...+...+...+.+++|+|||++|+|||||+...++++++
T Consensus 80 la~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~ 159 (475)
T cd07117 80 LAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSANMIDEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAP 159 (475)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceeEEEEeecceEEEECCCccHHHHHHHHHHH
Confidence 99999999999999987679999999999999888776655444333445688999999999999999999999999999
Q ss_pred HHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcC
Q 012658 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306 (459)
Q Consensus 227 ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~ 306 (459)
||++||+||+|||+.+|+++..+++++.++ +|+|++|+|+|.+.+.+..|..|+++|.|.||||+.+|+.|.+.+++ +
T Consensus 160 AL~aGN~VvlKPs~~~p~~~~~l~~~~~~~-lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~ 237 (475)
T cd07117 160 ALAAGNTVVIKPSSTTSLSLLELAKIIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAK-K 237 (475)
T ss_pred HHHcCCEEEEECCccCcHHHHHHHHHHHHh-CCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-c
Confidence 999999999999999999999999999985 99999999999777889999999999999999999999999999887 8
Q ss_pred CCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcc
Q 012658 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQ 386 (459)
Q Consensus 307 ~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~ 386 (459)
++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|++++.++++|+|.++++++
T Consensus 238 ~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~ 317 (475)
T cd07117 238 LIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLDPDTQM 317 (475)
T ss_pred CCcEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccC----CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 387 GPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 387 Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
||++++.+++++.++|++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 318 gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~ 393 (475)
T cd07117 318 GAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTE 393 (475)
T ss_pred cCcCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECCH
Confidence 9999999999999999999999999999997532 36899999999999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. |
| >cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-82 Score=662.88 Aligned_cols=388 Identities=44% Similarity=0.734 Sum_probs=368.7
Q ss_pred CceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 012658 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (459)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~ 146 (459)
++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|++|.++
T Consensus 2 ~~~I~g~~~~~~~~~~~~v~~P~t~~~~~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~ 79 (480)
T cd07559 2 DNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFK--TWGKTSVAERANILNKIADRIEENLEL 79 (480)
T ss_pred CccCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 579999999876789999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHH
Q 012658 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 226 (459)
Q Consensus 147 l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 226 (459)
|++++++|+|||+.++...|+..+++.+++|+++++...+...+.+.+...+..++|+|||++|+|||||+...++++++
T Consensus 80 la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~ 159 (480)
T cd07559 80 LAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSLSEIDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAP 159 (480)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHHHHH
Confidence 99999999999999887679999999999999988877665444444556788999999999999999999999999999
Q ss_pred HHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcC
Q 012658 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306 (459)
Q Consensus 227 ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~ 306 (459)
||++||+||+|||+.+|+++..+++++.++ +|+|++|+|+|++.+.+..|..|++|+.|.||||+.+|+.|++.+++ +
T Consensus 160 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~-~ 237 (480)
T cd07559 160 ALAAGNTVVLKPASQTPLSILVLMELIGDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAE-N 237 (480)
T ss_pred HHHcCCEEEEECchhhhHHHHHHHHHHHHh-CCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-c
Confidence 999999999999999999999999999996 99999999999778899999999999999999999999999999887 8
Q ss_pred CCceEEecCCcCcEEEccCC-----CHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCC
Q 012658 307 LKPVTLELGGKSPFIVCEDA-----DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381 (459)
Q Consensus 307 ~~pv~lelgG~~p~iV~~dA-----Dld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~ 381 (459)
++|+++|+|||||+||++|| |+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|++
T Consensus 238 ~~p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~ 317 (480)
T cd07559 238 LIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEAIKVGNPLD 317 (480)
T ss_pred CCcEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccC----CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCC
Q 012658 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGEN 457 (459)
Q Consensus 382 ~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~ 457 (459)
+++++||++++.+++++.++|++++++||++++||.... ..|+|++|||+.++++||.+++||+||||++|++|+|
T Consensus 318 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~ 397 (480)
T cd07559 318 PETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKD 397 (480)
T ss_pred CCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEEEeeCC
Confidence 999999999999999999999999999999999997642 4689999999999999999999999999999999998
Q ss_pred C
Q 012658 458 F 458 (459)
Q Consensus 458 ~ 458 (459)
+
T Consensus 398 ~ 398 (480)
T cd07559 398 E 398 (480)
T ss_pred H
Confidence 5
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. |
| >cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-82 Score=659.71 Aligned_cols=392 Identities=52% Similarity=0.868 Sum_probs=368.8
Q ss_pred cCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCC-CCCHHHHHHHHHHHHHHHHHcH
Q 012658 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP-RMTAYERSKIILRFADLLERHN 144 (459)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~-~~~~~~R~~iL~~~a~~l~~~~ 144 (459)
.++||||+|+.+.++.+++++||.||+++++++.++.+|++++++.|++||.. .|+ .++..+|.++|+++++.|++|.
T Consensus 7 ~~~~I~G~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~-~W~~~~~~~~R~~~L~~~a~~l~~~~ 85 (481)
T cd07143 7 TGLFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFET-DWGLKVSGSKRGRCLSKLADLMERNL 85 (481)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhhhh-hhcccCCHHHHHHHHHHHHHHHHHhH
Confidence 36799999998766788999999999999999999999999999999999971 399 9999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHH
Q 012658 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (459)
Q Consensus 145 ~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 224 (459)
++|++++++|+|||+.+....|+..+++.+++++.++++..+...+...+...+..++|+|||++|+|||||+...++++
T Consensus 86 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~ 165 (481)
T cd07143 86 DYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQVIETDIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKI 165 (481)
T ss_pred HHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEecceeEEEECCCcChHHHHHHHH
Confidence 99999999999999876656699999999999999998776655443334566789999999999999999999999999
Q ss_pred HHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHh
Q 012658 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304 (459)
Q Consensus 225 ~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~ 304 (459)
++||++||+||+|||+.+|+++..++++|.++|+|+|++|+|+|++.+.+..|..|+++|.|.||||+.+|+.|++.+++
T Consensus 166 ~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~~~aa~ 245 (481)
T cd07143 166 APALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAK 245 (481)
T ss_pred HHHHHcCCEEEEeCCCCCcHHHHHHHHHHHhcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999777889999999999999999999999999998885
Q ss_pred cCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCC
Q 012658 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384 (459)
Q Consensus 305 ~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~ 384 (459)
.+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++
T Consensus 246 ~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 325 (481)
T cd07143 246 SNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDPFAEDT 325 (481)
T ss_pred hcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 385 ~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++||++++.+++++.++|++++.+|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 326 ~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 399 (481)
T cd07143 326 FQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTE 399 (481)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCCH
Confidence 99999999999999999999999999999999865557899999999999999999999999999999999985
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. |
| >TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-81 Score=660.52 Aligned_cols=387 Identities=37% Similarity=0.626 Sum_probs=363.2
Q ss_pred CceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCC-CCCCCHHHHHHHHHHHHHHHHHcHH
Q 012658 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP-WPRMTAYERSKIILRFADLLERHND 145 (459)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~-W~~~~~~~R~~iL~~~a~~l~~~~~ 145 (459)
++||||+|+. ++++++++||+||+++++++.++.+|++++++.|++||. . |++++..+|.++|++++++|+++.+
T Consensus 2 ~~~i~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~~w~~~~~~~R~~~L~~~a~~l~~~~~ 77 (481)
T TIGR03216 2 RNFINGAFVE--SGKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAALK--GPWGKMTVAERADLLYAVADEIERRFD 77 (481)
T ss_pred CceECCEEec--CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhH--hhHhhCCHHHHHHHHHHHHHHHHHhHH
Confidence 5799999986 578999999999999999999999999999999999998 8 9999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCC----CCCceEEEEEccceEEEEEcCCCchHHhhH
Q 012658 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA----DGPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221 (459)
Q Consensus 146 ~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 221 (459)
+|++++++|+|||..++...|+..+++.+++|+..++.+.+...+. ..+...+..++|+|||++|+|||||+...+
T Consensus 78 ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~ 157 (481)
T TIGR03216 78 DFLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMT 157 (481)
T ss_pred HHHHHHHHHcCCcHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHH
Confidence 9999999999999988766699999999999999887765544321 113456788999999999999999999999
Q ss_pred HHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCCh-hHHHHHHcCCCccEEEeeCChHHHHHHHH
Q 012658 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGP-TAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (459)
Q Consensus 222 ~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 300 (459)
+++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+++|.+. +.+..|..|++||.|.||||+.+|+.|++
T Consensus 158 ~~~~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~i~~ 237 (481)
T TIGR03216 158 WKVGPALACGNTVVVKPSEETPGTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMK 237 (481)
T ss_pred HHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998654 57899999999999999999999999999
Q ss_pred HHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCC
Q 012658 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380 (459)
Q Consensus 301 ~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~ 380 (459)
.+++ +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.
T Consensus 238 ~aa~-~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~ 316 (481)
T TIGR03216 238 AAAD-GVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAESLKIGVPD 316 (481)
T ss_pred HHhc-CCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 9987 889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccC-----CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEec
Q 012658 381 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-----AKGYYIKPTVFTGVKVLILISPASISPNILHTFNG 455 (459)
Q Consensus 381 ~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~-----~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~ 455 (459)
++++++||++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|
T Consensus 317 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~~~ 396 (481)
T TIGR03216 317 DPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPF 396 (481)
T ss_pred CCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEEEe
Confidence 9999999999999999999999999999999999996432 36899999999999999999999999999999999
Q ss_pred CCC
Q 012658 456 ENF 458 (459)
Q Consensus 456 ~~~ 458 (459)
+|.
T Consensus 397 ~~~ 399 (481)
T TIGR03216 397 DSE 399 (481)
T ss_pred CCH
Confidence 984
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation. |
| >cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-81 Score=663.21 Aligned_cols=387 Identities=29% Similarity=0.399 Sum_probs=362.0
Q ss_pred ccCceecCEeeeCCCCCeeeeeCCCC-CCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHH-
Q 012658 65 YTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER- 142 (459)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~- 142 (459)
..++||||+|+. ++.+++++||+| |+++++++.++.+|+++|++.|++||+ .|++++..+|.++|++++++|++
T Consensus 32 ~~~~~i~G~~~~--~~~~~~v~~P~~tg~~l~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~ 107 (522)
T cd07123 32 EIPLVIGGKEVR--TGNTGKQVMPHDHAHVLATYHYADAALVEKAIEAALEARK--EWARMPFEDRAAIFLKAADLLSGK 107 (522)
T ss_pred ccCeeECCEEcC--CCCeEEEECCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhh
Confidence 457899999986 467899999995 999999999999999999999999999 99999999999999999999996
Q ss_pred cHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccC-CCCCceEEEEEccc-eEEEEEcCCCchHHhh
Q 012658 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHEPI-GVAGQIIPWNFPLLMF 220 (459)
Q Consensus 143 ~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~-GVv~~i~p~n~P~~~~ 220 (459)
++++|++++++|+|||+.++...|+..+++.++|++.+++++.+...+ ...+...++.++|+ |||++|+|||||+...
T Consensus 108 ~~~ela~~~~~e~Gk~~~~a~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwNfP~~~~ 187 (522)
T cd07123 108 YRYELNAATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEELYAQQPLSSPAGVWNRLEYRPLEGFVYAVSPFNFTAIGG 187 (522)
T ss_pred CHHHHHHHHHHhcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCceEEEECCcccHHHHH
Confidence 899999999999999998876568889999999999988877654333 22245678899998 9999999999999999
Q ss_pred HHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHH
Q 012658 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (459)
Q Consensus 221 ~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 300 (459)
.+++++|| +||+||+|||+.+|+++..|+++|.++|+|+|+||+|+|++.+.+..|+.|++|+.|.||||+++|+.|++
T Consensus 188 ~~~~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~~i~~ 266 (522)
T cd07123 188 NLAGAPAL-MGNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWK 266 (522)
T ss_pred HHHHHHHH-hCCEEEEECCCCCCHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHHHHHH
Confidence 99999999 69999999999999999999999999999999999999977778999999999999999999999999999
Q ss_pred HHHhcCCC------ceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhh
Q 012658 301 LAAKSNLK------PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 374 (459)
Q Consensus 301 ~~a~~~~~------pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~ 374 (459)
.+++ +++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++
T Consensus 267 ~aa~-~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l 345 (522)
T cd07123 267 QIGE-NLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEELKEI 345 (522)
T ss_pred HHHh-hcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhC
Confidence 9987 666 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhC-CCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEE
Q 012658 375 VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG-GAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTF 453 (459)
Q Consensus 375 ~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~-Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~ 453 (459)
++|+|+|+++++||+++..+++++.++|++++++ ||++++||.....+|+|++|||+.+++++|++++||+||||++|+
T Consensus 346 ~~G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~V~ 425 (522)
T cd07123 346 KMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGPVLTVY 425 (522)
T ss_pred ccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcCCCCCceEcCEEEeCCCCCChhhhcCCCCCeEEEE
Confidence 9999999999999999999999999999999999 999999997544468999999999999999999999999999999
Q ss_pred ecCC
Q 012658 454 NGEN 457 (459)
Q Consensus 454 ~~~~ 457 (459)
+|+|
T Consensus 426 ~~~~ 429 (522)
T cd07123 426 VYPD 429 (522)
T ss_pred EeCC
Confidence 9985
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. |
| >cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-81 Score=656.07 Aligned_cols=393 Identities=61% Similarity=1.003 Sum_probs=370.2
Q ss_pred cCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 012658 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (459)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~ 145 (459)
.++||||+|+.+.++.+++++||.||+++++++.++.+|++++++.|++||....|++++.++|.++|+++++.|+++.+
T Consensus 4 ~~~~I~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 83 (476)
T cd07091 4 TGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLADLIERDRD 83 (476)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 36899999997767789999999999999999999999999999999999992225599999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHH
Q 012658 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225 (459)
Q Consensus 146 ~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 225 (459)
+|++++++|+|||..++...|+..+++.++++++++++..+...+...+...+..++|+|||++|+|||||+...+++++
T Consensus 84 ~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~ 163 (476)
T cd07091 84 ELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKTIPIDGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLA 163 (476)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEeceeEEEEECCCcCHHHHHHHHHH
Confidence 99999999999998776667999999999999999887766555444456678899999999999999999999999999
Q ss_pred HHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhc
Q 012658 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305 (459)
Q Consensus 226 ~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~ 305 (459)
+||++||+||+|||+.+|.++..++++|.++|+|+|++|+|+|++.+.+..|..|+++|.|.||||+.+|+.|++.++.+
T Consensus 164 ~AL~aGN~VvlKps~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~~~aa~~ 243 (476)
T cd07091 164 PALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAKS 243 (476)
T ss_pred HHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999997778889999999999999999999999999988865
Q ss_pred CCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCc
Q 012658 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 385 (459)
Q Consensus 306 ~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~ 385 (459)
+++|+++|+|||||+||++|||+|.|++.|++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|++++++
T Consensus 244 ~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~~~ 323 (476)
T cd07091 244 NLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVGDPFDPDTF 323 (476)
T ss_pred CCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCCc
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 386 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 386 ~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+||++++.+++++.++|++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 324 ~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~ 396 (476)
T cd07091 324 QGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTE 396 (476)
T ss_pred CCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECcEEecCCCCCChhhhCCCCCCeEEEeecCCH
Confidence 9999999999999999999999999999999765557899999999999999999999999999999999985
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co |
| >TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-81 Score=661.74 Aligned_cols=390 Identities=29% Similarity=0.398 Sum_probs=363.8
Q ss_pred CccCceecCEeeeCCCCCeeeeeCCCC-CCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHH-
Q 012658 64 DYTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE- 141 (459)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~- 141 (459)
...++||||+|+.+ ++.+++++||.| |+++++++.++.+|+++|++.|++||+ .|++++..+|.++|++++++|+
T Consensus 30 ~~~~~~i~G~~~~~-~~~~~~~~nP~t~g~~i~~~~~~~~~~v~~av~~A~~a~~--~W~~~~~~~R~~~L~k~a~~l~~ 106 (533)
T TIGR01236 30 IEIPLVIGGEEVMG-SGERIDQVQPHNHQAVLAKATNATEEDAAKAVEAALDAKK--DWSALPFYDRAAIFLKAADLLSG 106 (533)
T ss_pred eeeceeECCEEecC-CCCEEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHh
Confidence 45578999999974 567899999997 899999999999999999999999999 9999999999999999999999
Q ss_pred HcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCccc-CCCCCceEEEEEccc-eEEEEEcCCCchHHh
Q 012658 142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA-PADGPYHVQTLHEPI-GVAGQIIPWNFPLLM 219 (459)
Q Consensus 142 ~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~-~~~~~~~~~~~~~P~-GVv~~i~p~n~P~~~ 219 (459)
+++++|++++++|+|||+.++...++..+++.++|++.+++++.+... +...+..+++.++|+ |||++|+|||||+..
T Consensus 107 ~~~~~la~~~~~e~GK~~~~a~~e~v~~~i~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~ 186 (533)
T TIGR01236 107 PYREEILAATMLGQSKNVYQAEIDAVAELIDFFRFNVKYARELYEQQPSESAPGEWNRTDYRPLEGFVYAISPFNFTAIA 186 (533)
T ss_pred hcHHHHHHHHHHHcCCcHHHHhHhHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCCEEEEEeCCchHHHH
Confidence 599999999999999999988653499999999999998887765433 222355678899999 999999999999999
Q ss_pred hHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHH
Q 012658 220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299 (459)
Q Consensus 220 ~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 299 (459)
..+++++|| +||+||+|||+.+|+++..|+++|.++|+|+|+||+|+|++.+.+..|+.|++|+.|.||||+++|+.|+
T Consensus 187 ~~~~~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~G~~i~ 265 (533)
T TIGR01236 187 GNLPGAPAL-MGNTVIWKPSITATLSNYLTMRILEEAGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTATFKHLW 265 (533)
T ss_pred HHHHHHHHH-hCCeEEEECCCcCCHHHHHHHHHHHhcCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 999999999 8999999999999999999999999999999999999997778899999999999999999999999999
Q ss_pred HHHHhcCCC------ceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHh
Q 012658 300 QLAAKSNLK------PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK 373 (459)
Q Consensus 300 ~~~a~~~~~------pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~ 373 (459)
+.+++ +++ ++++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++
T Consensus 266 ~~aa~-~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~ 344 (533)
T TIGR01236 266 KWVAS-NLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLYVPHSVWPRFKDELLAELAE 344 (533)
T ss_pred HHHHh-hccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEEchhHHHHHHHHHHHHHhc
Confidence 99987 665 49999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCC--CeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEE
Q 012658 374 RVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG--AKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILH 451 (459)
Q Consensus 374 ~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~G--a~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~ 451 (459)
+++|+|.|+++++||++++.+++++.++|++++++| |++++||......|+|++|||+.+++++|++++||+||||++
T Consensus 345 l~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~~~~G~~~~PTvl~~~~~d~~i~~eE~FGPVl~ 424 (533)
T TIGR01236 345 VKVGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYDDSEGYFVEPTVILSKDPTDPLMVEEIFGPVLT 424 (533)
T ss_pred CCcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcccCCCCeEE
Confidence 999999999999999999999999999999999987 799999976444689999999999999999999999999999
Q ss_pred EEecCCC
Q 012658 452 TFNGENF 458 (459)
Q Consensus 452 v~~~~~~ 458 (459)
|++|+|.
T Consensus 425 v~~~~~~ 431 (533)
T TIGR01236 425 VYVYPDD 431 (533)
T ss_pred EEEeCCC
Confidence 9999983
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate. |
| >TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-81 Score=658.15 Aligned_cols=387 Identities=41% Similarity=0.699 Sum_probs=364.9
Q ss_pred CceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 012658 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (459)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~ 146 (459)
++||||+|+.+.++++++++||.||+++++++.++.+|++++++.|++|+. .|++++..+|.++|+++++.|+++.++
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~~ 79 (488)
T TIGR02299 2 GHFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFK--RWAELKAAERKRYLHKIADLIEQHADE 79 (488)
T ss_pred CccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 579999999876678999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhh-hcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHH
Q 012658 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK-IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225 (459)
Q Consensus 147 l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~-~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 225 (459)
|++++++|+|||+.++. .|+..+++.+++++..+++ ..+...+.. ....+..++|+|||++|+|||||+...+++++
T Consensus 80 l~~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~ 157 (488)
T TIGR02299 80 IAVLECLDCGQPLRQTR-QQVIRAAENFRFFADKCEEAMDGRTYPVD-THLNYTVRVPVGPVGLITPWNAPFMLSTWKIA 157 (488)
T ss_pred HHHHHHHHcCCcHHHHH-HHHHHHHHHHHHHHHhHHHhcCCccccCC-CceEEEEEEecceEEEECCCccHHHHHHHHHH
Confidence 99999999999999987 6999999999999988873 344444433 34567889999999999999999999999999
Q ss_pred HHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhc
Q 012658 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305 (459)
Q Consensus 226 ~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~ 305 (459)
+||++||+||+|||+.+|+++..++++|.++|+|+|+||+++|.+.+.+..|..|++||.|.||||+++|+.|++.+++
T Consensus 158 ~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~aa~- 236 (488)
T TIGR02299 158 PALAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGAD- 236 (488)
T ss_pred HHHHcCCEEEEECchhchHHHHHHHHHHHHcCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh-
Confidence 9999999999999999999999999999999999999999999777788999999999999999999999999999987
Q ss_pred CCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCc
Q 012658 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 385 (459)
Q Consensus 306 ~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~ 385 (459)
+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.+++++
T Consensus 237 ~l~~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~~~ 316 (488)
T TIGR02299 237 TLKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLDPETE 316 (488)
T ss_pred cCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCCcCCCCCCCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccC-------CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 386 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-------AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 386 ~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~-------~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+||++++.+++++.++|++++++|+++++||.... .+|+|++|||+.+++++|.+++||+||||++|++|+|+
T Consensus 317 ~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~ 396 (488)
T TIGR02299 317 VGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDE 396 (488)
T ss_pred CCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEeeCCH
Confidence 99999999999999999999999999999986532 25899999999999999999999999999999999984
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. |
| >cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-81 Score=654.54 Aligned_cols=387 Identities=33% Similarity=0.500 Sum_probs=364.5
Q ss_pred CceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 012658 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (459)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~ 146 (459)
++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++|++ .|++++..+|.++|+++++.|+++.++
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e 79 (478)
T cd07085 2 KLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFP--AWSATPVLKRQQVMFKFRQLLEENLDE 79 (478)
T ss_pred CceECCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 579999999876678999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCC-CCCceEEEEEccceEEEEEcCCCchHHhhHHHHH
Q 012658 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225 (459)
Q Consensus 147 l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 225 (459)
|++++++|+|||+.++. .|+..+++.++|++...+...+...+. ..+...+..++|+|||++|+|||||+...+++++
T Consensus 80 l~~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~ 158 (478)
T cd07085 80 LARLITLEHGKTLADAR-GDVLRGLEVVEFACSIPHLLKGEYLENVARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFP 158 (478)
T ss_pred HHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhCCeecccCCCCceeEEEEecceEEEEECCCChHHHHHHHHHH
Confidence 99999999999999876 599999999999998777666655432 2244578999999999999999999999999999
Q ss_pred HHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhc
Q 012658 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305 (459)
Q Consensus 226 ~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~ 305 (459)
+||++||+||+|||+.+|+++..|+++|.++|+|+|+||+++| +.+.+..|++|++|+.|.||||+.+|+.|++.+++
T Consensus 159 ~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aGlP~gvv~~v~g-~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~- 236 (478)
T cd07085 159 MAIACGNTFVLKPSERVPGAAMRLAELLQEAGLPDGVLNVVHG-GKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAA- 236 (478)
T ss_pred HHHhcCCEEEEECCCcCcHHHHHHHHHHHHhCCCCCcEEEEec-CHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhh-
Confidence 9999999999999999999999999999999999999999998 45678999999999999999999999999998887
Q ss_pred CCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCc
Q 012658 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 385 (459)
Q Consensus 306 ~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~ 385 (459)
+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+++++
T Consensus 237 ~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~ 316 (478)
T cd07085 237 NGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDDPGAD 316 (478)
T ss_pred cCCcEEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCC
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccC----CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 386 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 386 ~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+||++++.+++++.++|++++++||++++||.... .+|+|++|||+.+++++|.+++||+||||++|++|+|+
T Consensus 317 ~gpli~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 393 (478)
T cd07085 317 MGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTL 393 (478)
T ss_pred cCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCCH
Confidence 99999999999999999999999999999986421 36899999999999999999999999999999999985
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. |
| >cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-80 Score=653.43 Aligned_cols=390 Identities=50% Similarity=0.837 Sum_probs=367.2
Q ss_pred cCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCC-CCCCCHHHHHHHHHHHHHHHHHcH
Q 012658 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP-WPRMTAYERSKIILRFADLLERHN 144 (459)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~-W~~~~~~~R~~iL~~~a~~l~~~~ 144 (459)
.++||||+|+.+.++.+++++||+||+++++++.++.+|++++++.|++|++ . |+.++.++|.++|+++++.|+++.
T Consensus 8 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~ai~~A~~A~~--~~w~~~~~~~R~~iL~~~a~~l~~~~ 85 (484)
T cd07144 8 TGLFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFE--SWWSKVTGEERGELLDKLADLVEKNR 85 (484)
T ss_pred cCcEECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hhHhcCCHHHHHHHHHHHHHHHHHhH
Confidence 3689999999876678899999999999999999999999999999999998 6 889999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHH
Q 012658 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (459)
Q Consensus 145 ~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 224 (459)
++|++++++|+|||..++...|+..+++.+++++.++++..+...+...+...+..++|+|||++|+|||||+...++++
T Consensus 86 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~ 165 (484)
T cd07144 86 DLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTIPTSPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKL 165 (484)
T ss_pred HHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEEecceEEEEECcCCCHHHHHHHHH
Confidence 99999999999999877656699999999999999988876655443334556889999999999999999999999999
Q ss_pred HHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHh
Q 012658 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304 (459)
Q Consensus 225 ~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~ 304 (459)
++||++||+||+|||+.+|+++..+.++|.++|+|+|++|+|+|++.+.+..|..|+++|.|.||||+.+|+.|++.+++
T Consensus 166 ~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~a~~ 245 (484)
T cd07144 166 APALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAAQ 245 (484)
T ss_pred HHHHHcCCEEEEECCccchHHHHHHHHHHHHhCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999777889999999999999999999999999999887
Q ss_pred cCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHh-hccCCCCCCC
Q 012658 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK-RVVGDPFKGG 383 (459)
Q Consensus 305 ~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~-~~vG~p~~~~ 383 (459)
+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|+++++||||+++||+|+++|++++++ +++|+|++++
T Consensus 246 -~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~G~p~~~~ 324 (484)
T cd07144 246 -NLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSPFDDD 324 (484)
T ss_pred -cCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhhCCcCCCCCCC
Confidence 88999999999999999999999999999999999999999999999999999999999999999985 8999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccC---CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG---AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 384 ~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~---~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++||++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|.+++||+||||++|++|+|+
T Consensus 325 ~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~ 402 (484)
T cd07144 325 TVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTY 402 (484)
T ss_pred CcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcccCCCCceECCEEEeCCCCCCchhhCCCCCceEEEeccCCH
Confidence 9999999999999999999999999999999997543 36899999999999999999999999999999999985
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. |
| >cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-80 Score=653.39 Aligned_cols=388 Identities=44% Similarity=0.737 Sum_probs=366.4
Q ss_pred eecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHH
Q 012658 69 LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIA 148 (459)
Q Consensus 69 ~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~ 148 (459)
||||+|+...++.+++++||+||+++++++.++.+|++++++.|++||.++.|++++..+|.++|+++++.|+++.++|+
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 80 (482)
T cd07119 1 YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELA 80 (482)
T ss_pred CCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 69999987666789999999999999999999999999999999999975569999999999999999999999999999
Q ss_pred HHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHH
Q 012658 149 ALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 228 (459)
Q Consensus 149 ~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL 228 (459)
+++++|+|||..++. .|+..+++.++|++.+.++..+...+...+...+.+++|+|||++|+|||||+...++++++||
T Consensus 81 ~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~AL 159 (482)
T cd07119 81 RLETLNTGKTLRESE-IDIDDVANCFRYYAGLATKETGEVYDVPPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPAL 159 (482)
T ss_pred HHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEeeeeeEEEEcCCchHHHHHHHHHHHHH
Confidence 999999999999886 4999999999999999887665544433455678999999999999999999999999999999
Q ss_pred hcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCC
Q 012658 229 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLK 308 (459)
Q Consensus 229 aaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~ 308 (459)
++||+||+|||+.+|+++..++++|.++|+|+|++|+|+|++.+.+..|..|+++|.|.||||+.+|+.|++.+++ +++
T Consensus 160 aaGN~VilKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~-~~~ 238 (482)
T cd07119 160 AAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAG-NVK 238 (482)
T ss_pred hcCCEEEEECCccccHHHHHHHHHHHHcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCC
Confidence 9999999999999999999999999999999999999999777789999999999999999999999999999887 889
Q ss_pred ceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccc
Q 012658 309 PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGP 388 (459)
Q Consensus 309 pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gp 388 (459)
|+++|+|||||+||++|||+|.|++.+++++|.|+||.|+++++||||+++||+|+++|++++.++++|+|.++++++||
T Consensus 239 ~~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~gp 318 (482)
T cd07119 239 KVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNGLDADTEMGP 318 (482)
T ss_pred cEEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHhCCCeEEeCCcccC----CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 389 QIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 389 l~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 319 li~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~ 392 (482)
T cd07119 319 LVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTE 392 (482)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccCCH
Confidence 99999999999999999999999999997532 25899999999999999999999999999999999985
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. |
| >cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-80 Score=651.76 Aligned_cols=386 Identities=41% Similarity=0.657 Sum_probs=363.9
Q ss_pred CceecCEeeeCCCCCeeeeeCCC-CCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 012658 67 QLLINGQFVDSASGKTFPTLDPR-TGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (459)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~-tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~ 145 (459)
++||||+|+.+. ..++++||. ||+++++++.++.+|++++++.|++||+ .|++++..+|.++|+++++.|++|.+
T Consensus 2 ~~~i~g~~~~~~--~~~~v~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ 77 (473)
T cd07097 2 RNYIDGEWVAGG--DGEENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFP--AWRRTSPEARADILDKAGDELEARKE 77 (473)
T ss_pred CceECCEEecCC--CCceeECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 579999998753 347999999 5999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCC-CCCceEEEEEccceEEEEEcCCCchHHhhHHHH
Q 012658 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (459)
Q Consensus 146 ~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 224 (459)
+|++++++|+|||+.++.. |+..+++.++||+...++..+...+. ..+...+..++|+|||++|+|||||+.+.++++
T Consensus 78 ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~i 156 (473)
T cd07097 78 ELARLLTREEGKTLPEARG-EVTRAGQIFRYYAGEALRLSGETLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKI 156 (473)
T ss_pred HHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEEeeeeEEEEcccChHHHHHHHHH
Confidence 9999999999999999864 99999999999999888776654432 234567899999999999999999999999999
Q ss_pred HHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHh
Q 012658 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304 (459)
Q Consensus 225 ~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~ 304 (459)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.+.+..|..|++|+.|.||||+.+|+.|++.+++
T Consensus 157 ~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~ 236 (473)
T cd07097 157 APALAYGNTVVFKPAELTPASAWALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAAA 236 (473)
T ss_pred HHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999777789999999999999999999999999999887
Q ss_pred cCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCC
Q 012658 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384 (459)
Q Consensus 305 ~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~ 384 (459)
+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++
T Consensus 237 -~~~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 315 (473)
T cd07097 237 -RGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDALDEGV 315 (473)
T ss_pred -cCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHHHHHHHHHHHHHHhCCCCCCCCCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccC--CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 385 ~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++||++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 316 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 391 (473)
T cd07097 316 DIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDY 391 (473)
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCCH
Confidence 999999999999999999999999999999997532 35899999999999999999999999999999999985
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. |
| >PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-80 Score=651.77 Aligned_cols=388 Identities=39% Similarity=0.650 Sum_probs=365.9
Q ss_pred cCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 012658 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (459)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~ 145 (459)
.++||||+|+.. ++++++++||+||+++++++.++.+|++++++.|++||+ .|++++..+|.++|+++++.|+++.+
T Consensus 3 ~~~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 79 (475)
T PRK13473 3 TKLLINGELVAG-EGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFP--EWSQTTPKERAEALLKLADAIEENAD 79 (475)
T ss_pred ccceECCEEecC-CCCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 367999999875 678999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCC-CCCceEEEEEccceEEEEEcCCCchHHhhHHHH
Q 012658 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (459)
Q Consensus 146 ~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 224 (459)
+|++++++|+|||..++...|+..+++.++++++.++.+.+...+. ..+...+..++|+|||++|+|||||+...++++
T Consensus 80 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~i 159 (475)
T PRK13473 80 EFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKL 159 (475)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceeEEEEccCChHHHHHHHHH
Confidence 9999999999999988766699999999999999888776543321 223356788999999999999999999999999
Q ss_pred HHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHh
Q 012658 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304 (459)
Q Consensus 225 ~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~ 304 (459)
++||++||+||+|||+.+|+++..+++++.++ +|+|++|+++|.+.+.+..|..|++||.|.||||+++|+.|++.+++
T Consensus 160 ~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~a-lP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~~~aa~ 238 (475)
T PRK13473 160 APALAAGNTVVLKPSEITPLTALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAAD 238 (475)
T ss_pred HHHHhcCCEEEEECCCCChHHHHHHHHHHHHh-CCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999 99999999999778899999999999999999999999999999887
Q ss_pred cCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCC
Q 012658 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384 (459)
Q Consensus 305 ~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~ 384 (459)
+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++
T Consensus 239 -~~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~ 317 (475)
T PRK13473 239 -SVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPDDEDT 317 (475)
T ss_pred -cCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCC
Confidence 8899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCHHHHHHHHHHHHHHHhCC-CeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 385 QQGPQIDSEQFEKILKYIRSGVDGG-AKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 385 ~~Gpl~~~~~~~~i~~~i~~a~~~G-a~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++||++++.+++++.++|++++++| +++++||......|+|++|||+.+++++|.+++||+||||++|++|+|+
T Consensus 318 ~~gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 392 (475)
T PRK13473 318 ELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDE 392 (475)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcCCCCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCCH
Confidence 9999999999999999999999999 9999999765446899999999999999999999999999999999985
|
|
| >PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-80 Score=650.35 Aligned_cols=390 Identities=40% Similarity=0.666 Sum_probs=367.7
Q ss_pred CceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 012658 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (459)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~ 146 (459)
++||||+|+...++++++++||+||+++++++.++.+|++++++.|++||..+.|+.++..+|.++|+++++.|+++.++
T Consensus 21 ~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~v~~~~~~dv~~av~aA~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~e 100 (494)
T PRK09847 21 RLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAEE 100 (494)
T ss_pred CceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 68999999987678899999999999999999999999999999999999754699999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHH
Q 012658 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 226 (459)
Q Consensus 147 l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 226 (459)
|++++++|+|||+.++...|+..+++.++|++..+++..+...+...+...+..++|+|||++|+|||||+...++++++
T Consensus 101 la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 180 (494)
T PRK09847 101 LALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGP 180 (494)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEecceeEEEEECCCccHHHHHHHHHHH
Confidence 99999999999998876669999999999999998887766554434455688999999999999999999999999999
Q ss_pred HHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcC
Q 012658 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306 (459)
Q Consensus 227 ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~ 306 (459)
||++||+||+|||+.+|.++..+++++.++|+|+|+||+++|.+.+.+..|..|+++|.|.||||+.+|+.|.+.++..+
T Consensus 181 ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~v~~~aa~~~ 260 (494)
T PRK09847 181 ALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSN 260 (494)
T ss_pred HHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhhC
Confidence 99999999999999999999999999999999999999999977888999999999999999999999999999888447
Q ss_pred CCceEEecCCcCcEEEccCC-CHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCc
Q 012658 307 LKPVTLELGGKSPFIVCEDA-DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 385 (459)
Q Consensus 307 ~~pv~lelgG~~p~iV~~dA-Dld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~ 385 (459)
++|+++|+|||||+||.+|+ |+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+++++
T Consensus 261 ~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~ 340 (494)
T PRK09847 261 MKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHPLDPATT 340 (494)
T ss_pred CCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCc
Confidence 89999999999999999997 99999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 386 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 386 ~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+||++++.+++++.++|++++++| ++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 341 ~gpli~~~~~~~v~~~v~~a~~~G-~i~~gg~~~-~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~ 411 (494)
T PRK09847 341 MGTLIDCAHADSVHSFIREGESKG-QLLLDGRNA-GLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSE 411 (494)
T ss_pred CCCCcCHHHHHHHHHHHHHHHHCC-eEEECCccC-CCCceEeeEEEeCCCCCChHHhCcCcCceEEEEecCCH
Confidence 999999999999999999999999 999998653 35789999999999999999999999999999999985
|
|
| >TIGR01804 BADH glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-80 Score=650.18 Aligned_cols=387 Identities=40% Similarity=0.690 Sum_probs=366.4
Q ss_pred eecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHH
Q 012658 69 LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIA 148 (459)
Q Consensus 69 ~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~ 148 (459)
||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++|++ .|+.++..+|.++|+++++.|+++.++|+
T Consensus 1 ~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la 78 (467)
T TIGR01804 1 FIDGEWVEASAGETREIINPANQEVIATVAEATREDVERAIAAARRAQG--EWASMTPEERGRILRRIAELIRERNEELA 78 (467)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 6999999776678999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHH
Q 012658 149 ALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 228 (459)
Q Consensus 149 ~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL 228 (459)
+++++|+|||+.++...|+..+++.++|++..+++..+...+.......+..++|+|||++|+|||||+...++++++||
T Consensus 79 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL 158 (467)
T TIGR01804 79 KLETLDTGKTLEETSVADMDDIADVFEFFAGLADKDGGEIIPLPIPSFSYTIREPLGVCVGIGAWNYPLQIASWKIAPAL 158 (467)
T ss_pred HHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCCccccCCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHH
Confidence 99999999999988556999999999999999888766554433334567899999999999999999999999999999
Q ss_pred hcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCC
Q 012658 229 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLK 308 (459)
Q Consensus 229 aaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~ 308 (459)
++||+||+|||+.+|.++..++++|.++|+|+|++|+++|++.+.+..|..|+++|.|.||||+++|+.|++.+++ ++|
T Consensus 159 aaGN~VvlKps~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~-~l~ 237 (467)
T TIGR01804 159 AAGNAMVFKPSEITPLTALKVAELMEEAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAAAD-HLK 237 (467)
T ss_pred hcCCEEEeeCCccCcHHHHHHHHHHHHcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCC
Confidence 9999999999999999999999999999999999999999777889999999999999999999999999999887 889
Q ss_pred ceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccc
Q 012658 309 PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGP 388 (459)
Q Consensus 309 pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gp 388 (459)
|+++|+|||||+||++|||+|.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++++++||
T Consensus 238 ~~~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gp 317 (467)
T TIGR01804 238 HVTMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIKEKFEARLVERTKRIKLGDGFDEATEMGP 317 (467)
T ss_pred cEEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHhCCCeEEeCCcccC----CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 389 QIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 389 l~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 318 li~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 391 (467)
T TIGR01804 318 LISAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSSE 391 (467)
T ss_pred cCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCCH
Confidence 99999999999999999999999999996532 25899999999999999999999999999999999985
|
Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171). |
| >PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-80 Score=650.39 Aligned_cols=386 Identities=31% Similarity=0.444 Sum_probs=360.1
Q ss_pred CceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 012658 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (459)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~ 146 (459)
.+||||+|+.+ ++++++++||.||+++++++.++.+|++++++.|++||+ .|++++..+|.++|++++++|+++.++
T Consensus 2 ~~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~a~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e 78 (487)
T PRK09457 2 TLWINGDWIAG-QGEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFP--AWARLSFEERQAIVERFAALLEENKEE 78 (487)
T ss_pred CceECCEEecC-CCCEEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHhHHHH
Confidence 47999999875 467899999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHH
Q 012658 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 226 (459)
Q Consensus 147 l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 226 (459)
|++++++|+|||+.++. .|+..+++.+++++.+.....+...+...+...+..++|+|||++|+|||||+...++++++
T Consensus 79 la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 157 (487)
T PRK09457 79 LAEVIARETGKPLWEAA-TEVTAMINKIAISIQAYHERTGEKRSEMADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVP 157 (487)
T ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCceeccCCCceeEEEEeccEEEEEECCCchHHHHHHHHHHH
Confidence 99999999999999986 59999999999998877665554333223445688999999999999999999999999999
Q ss_pred HHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcC
Q 012658 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306 (459)
Q Consensus 227 ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~ 306 (459)
||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+| +.+.+..|..|++|+.|.||||+++|+.|++.++.+.
T Consensus 158 ALaaGN~VvlKPs~~tp~t~~~l~~l~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~ 236 (487)
T PRK09457 158 ALLAGNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQP 236 (487)
T ss_pred HHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcC
Confidence 999999999999999999999999999999999999999998 6678999999999999999999999999999887645
Q ss_pred CCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcch-HHHHHHHHHHHHhhccCCCC-CCCC
Q 012658 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY-DQFVEKANALAMKRVVGDPF-KGGI 384 (459)
Q Consensus 307 ~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~-d~f~~~l~~~~~~~~vG~p~-~~~~ 384 (459)
.+++++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++| |+|+++|+++++++++|+|+ ++.+
T Consensus 237 ~~~~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~vG~p~~~~~~ 316 (487)
T PRK09457 237 EKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRWDAEPQP 316 (487)
T ss_pred CCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHHHHHHHHHHHHhcCcCCCCCcCCCC
Confidence 688999999999999999999999999999999999999999999999999998 99999999999999999996 7889
Q ss_pred cccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 385 ~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++||+++..+++++.++|++++++|+++++||.....+|+|++|||+ +++++|++++||+||||++|++|+|+
T Consensus 317 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl-~v~~~~~i~~eE~FGPVl~V~~~~~~ 389 (487)
T PRK09457 317 FMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTGLLTPGII-DVTGVAELPDEEYFGPLLQVVRYDDF 389 (487)
T ss_pred ccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccCCCCeeEecEEe-ccCCCChHHhCCCcCCeEEEEEeCCH
Confidence 99999999999999999999999999999988654456899999999 79999999999999999999999985
|
|
| >cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-80 Score=651.16 Aligned_cols=386 Identities=42% Similarity=0.680 Sum_probs=361.8
Q ss_pred CceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 012658 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (459)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~ 146 (459)
++||||+|+.+.++++++++||.||+++++++.++.+|++++++.|++||+ .|++++..+|.++|+++++.|+++.++
T Consensus 2 ~~~i~g~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~ 79 (479)
T cd07116 2 DNFIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKE--AWGKTSVAERANILNKIADRMEANLEM 79 (479)
T ss_pred CceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 579999999877788999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHH
Q 012658 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 226 (459)
Q Consensus 147 l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 226 (459)
|+.++++|+|||+.++...|+..+++.++||+...+...+...+...+...+..++|+|||++|+|||||+.+.++++++
T Consensus 80 la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 159 (479)
T cd07116 80 LAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSISEIDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAP 159 (479)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhHHHcCCeeecCCCCceEEEEEeccceEEEECCCchHHHHHHHHHHH
Confidence 99999999999998876669999999999999988776554444334455788999999999999999999999999999
Q ss_pred HHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcC
Q 012658 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306 (459)
Q Consensus 227 ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~ 306 (459)
||++||+||+|||+.+|+++..+++++.++ +|+|+||+|+|.+.+.+..|+.|++|+.|.||||+++|+.|++.+++ +
T Consensus 160 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~a-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~-~ 237 (479)
T cd07116 160 ALAAGNCVVLKPAEQTPASILVLMELIGDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASE-N 237 (479)
T ss_pred HHHcCCEEEEECCCCChHHHHHHHHHHHHH-CCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHc-C
Confidence 999999999999999999999999999998 99999999999777889999999999999999999999999999987 7
Q ss_pred CCceEEecCCcCcEEEccC------CCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCC
Q 012658 307 LKPVTLELGGKSPFIVCED------ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380 (459)
Q Consensus 307 ~~pv~lelgG~~p~iV~~d------ADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~ 380 (459)
++|+++|+|||||+||++| ||+|.|++.++++. +|+||.|++++|||||+++||+|+++|+++++++++|+|+
T Consensus 238 ~~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~ 316 (479)
T cd07116 238 IIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFA-LNQGEVCTCPSRALIQESIYDRFMERALERVKAIKQGNPL 316 (479)
T ss_pred CCeEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 9999999999999999998 79999999999865 5999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccC----CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecC
Q 012658 381 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGE 456 (459)
Q Consensus 381 ~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~ 456 (459)
++++++||++++.+++++.++|++++++||++++||.... .+|+|++|||+.++ ++|.+++||+||||++|++|+
T Consensus 317 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~-~~~~~~~eE~FGPVl~v~~~~ 395 (479)
T cd07116 317 DTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGG-NKMRIFQEEIFGPVLAVTTFK 395 (479)
T ss_pred CCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccC-CCChhhhcCCcCceEEEEEeC
Confidence 9999999999999999999999999999999999996532 35899999999987 499999999999999999999
Q ss_pred CC
Q 012658 457 NF 458 (459)
Q Consensus 457 ~~ 458 (459)
|+
T Consensus 396 ~~ 397 (479)
T cd07116 396 DE 397 (479)
T ss_pred CH
Confidence 85
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. |
| >cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-80 Score=650.21 Aligned_cols=385 Identities=36% Similarity=0.590 Sum_probs=363.4
Q ss_pred ceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHH
Q 012658 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI 147 (459)
Q Consensus 68 ~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l 147 (459)
+||||+|+.+. +.+++++||+||+++++++.++.+|++++++.|++|+. .|++++.++|.++|+++++.|+++.++|
T Consensus 1 ~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el 77 (478)
T cd07086 1 GVIGGEWVGSG-GETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFK--EWRKVPAPRRGEIVRQIGEALRKKKEAL 77 (478)
T ss_pred CcCCCEEecCC-CCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 58999999764 68899999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCC-CCceEEEEEccceEEEEEcCCCchHHhhHHHHHH
Q 012658 148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 226 (459)
Q Consensus 148 ~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 226 (459)
++++++|+|||+.++. .|+..+++.++|++..++.+.+...+.. .+...+..++|+|||++|+|||||+...++++++
T Consensus 78 a~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ 156 (478)
T cd07086 78 GRLVSLEMGKILPEGL-GEVQEMIDICDYAVGLSRMLYGLTIPSERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAI 156 (478)
T ss_pred HHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceeEEEECCCCcHHHHHHHHHHH
Confidence 9999999999999876 5999999999999999888766554422 2345678999999999999999999999999999
Q ss_pred HHhcCCeEEeecCCCchHHHHHHHHHHHHc----CCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHH
Q 012658 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (459)
Q Consensus 227 ALaaGN~VVlKps~~~p~~~~~l~~ll~~a----GlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~ 302 (459)
||++||+||+|||+.+|.++..++++|.++ |+|+|++|+++|++. .+..|..|+++|.|.||||+.+|+.|++.+
T Consensus 157 ALaaGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~-~~~~L~~~~~vd~v~fTGs~~~g~~i~~~a 235 (478)
T cd07086 157 ALVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGD-GGELLVHDPRVPLVSFTGSTEVGRRVGETV 235 (478)
T ss_pred HHHcCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCch-hHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 999999999999999999999999999999 999999999998654 889999999999999999999999999998
Q ss_pred HhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCC
Q 012658 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 382 (459)
Q Consensus 303 a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~ 382 (459)
++ +++|+++|+|||||+||++|||+|.|++.|++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++
T Consensus 236 a~-~~~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~ 314 (478)
T cd07086 236 AR-RFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGDPLDE 314 (478)
T ss_pred hc-cCCcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHHHHHHHHHHHHHHhCCcCCCCCC
Confidence 87 88999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCC--CCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA--KGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 383 ~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~--~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++++||++++.+++++.++|++++++|+++++||..... +|+|++|||+.+++++|.+++||+||||++|++|+|+
T Consensus 315 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~~ 392 (478)
T cd07086 315 GTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSL 392 (478)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCCH
Confidence 999999999999999999999999999999999976432 5899999999999999999999999999999999985
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). |
| >cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-80 Score=652.83 Aligned_cols=387 Identities=37% Similarity=0.567 Sum_probs=366.0
Q ss_pred cCceecCEeeeCCCCCeeeeeCCCC-CCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 012658 66 TQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (459)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~ 144 (459)
.++||||+|+. ++.+++++||+| |+++++++.++.+|++++++.|++||+ .|++++..+|.++|+++++.|+++.
T Consensus 33 ~~~~i~g~~~~--~~~~~~v~~P~t~~~~i~~~~~a~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~ 108 (512)
T cd07124 33 YPLVIGGKEVR--TEEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFP--TWRRTPPEERARLLLRAAALLRRRR 108 (512)
T ss_pred cceeECCEEec--CCCeEEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCH
Confidence 37899999986 467899999998 999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHH
Q 012658 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (459)
Q Consensus 145 ~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 224 (459)
++|++++++|+|||+.++.. |+..+++.++||+.++++..+...+...+...+.+++|+|||++|+|||||+.+.++++
T Consensus 109 ~~la~~~~~e~Gk~~~ea~~-ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i 187 (512)
T cd07124 109 FELAAWMVLEVGKNWAEADA-DVAEAIDFLEYYAREMLRLRGFPVEMVPGEDNRYVYRPLGVGAVISPWNFPLAILAGMT 187 (512)
T ss_pred HHHHHHHHHHcCcCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEecceEEEEECCCChHHHHHHHHH
Confidence 99999999999999999864 99999999999999998876554443345567899999999999999999999999999
Q ss_pred HHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHh
Q 012658 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304 (459)
Q Consensus 225 ~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~ 304 (459)
++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|++.+.+..|..|+++|.|.||||+.+|+.|++.+++
T Consensus 188 ~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~ 267 (512)
T cd07124 188 TAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAK 267 (512)
T ss_pred HHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCCCceEEeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999877889999999999999999999999999999886
Q ss_pred c-----CCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCC
Q 012658 305 S-----NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379 (459)
Q Consensus 305 ~-----~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p 379 (459)
+ +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|++++.++++|+|
T Consensus 268 ~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p 347 (512)
T cd07124 268 VQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTKALKVGDP 347 (512)
T ss_pred ccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCccccceEEEEcHHHHHHHHHHHHHHHHhCCCCCC
Confidence 4 68999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCC--CCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCC
Q 012658 380 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA--KGYYIKPTVFTGVKVLILISPASISPNILHTFNGEN 457 (459)
Q Consensus 380 ~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~--~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~ 457 (459)
.|+++++||++++.+++++.++|+++++ |+++++||..... +|+|++|||+.+++++|.+++||+||||++|++|+|
T Consensus 348 ~d~~~~~Gpli~~~~~~~v~~~i~~a~~-g~~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~ 426 (512)
T cd07124 348 EDPEVYMGPVIDKGARDRIRRYIEIGKS-EGRLLLGGEVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKD 426 (512)
T ss_pred CCCCCcccCCcCHHHHHHHHHHHHHHHh-CCEEEecCccCCCCCCCceEcCEEEecCCCCChHHhCCCcCCeEEEEecCC
Confidence 9999999999999999999999999988 8999999976432 689999999999999999999999999999999998
Q ss_pred C
Q 012658 458 F 458 (459)
Q Consensus 458 ~ 458 (459)
+
T Consensus 427 ~ 427 (512)
T cd07124 427 F 427 (512)
T ss_pred H
Confidence 5
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. |
| >cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-80 Score=646.34 Aligned_cols=384 Identities=40% Similarity=0.608 Sum_probs=363.0
Q ss_pred ceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHH
Q 012658 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI 147 (459)
Q Consensus 68 ~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l 147 (459)
+||||+|+.+.++++++++||.||+++++++.++.+|++++++.|++||. .|++++..+|.++|++++++|++|.++|
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l 78 (466)
T cd07138 1 FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFP--AWSATSVEERAALLERIAEAYEARADEL 78 (466)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 58999999876678899999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHH
Q 012658 148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 227 (459)
Q Consensus 148 ~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 227 (459)
++++++|+|||..++...|+..+++.++++++.++.+..... ....+..++|+|||++|+|||||+...++++++|
T Consensus 79 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~A 154 (466)
T cd07138 79 AQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEER----RGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPA 154 (466)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccccc----CceEEEEEeecceEEEECCCccHHHHHHHHHHHH
Confidence 999999999999887666999999999999988876644322 2345778999999999999999999999999999
Q ss_pred HhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCC
Q 012658 228 LACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 307 (459)
Q Consensus 228 LaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~ 307 (459)
|++||+||+|||+.+|+++..++++|.++|+|+|+||+++|++.+.+..|..|++++.|.||||+.+|+.|++.++. ++
T Consensus 155 LaaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~~ 233 (466)
T cd07138 155 LAAGCTVVLKPSEVAPLSAIILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAAD-TV 233 (466)
T ss_pred HhcCCEEEEECCCcCcHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-cC
Confidence 99999999999999999999999999999999999999999777889999999999999999999999999999887 78
Q ss_pred CceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCccc
Q 012658 308 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQG 387 (459)
Q Consensus 308 ~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~G 387 (459)
+|+++|+|||||+||++|||+|.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|+++++++|
T Consensus 234 ~~v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~g 313 (466)
T cd07138 234 KRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDPATTLG 313 (466)
T ss_pred CeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccC---CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 388 PQIDSEQFEKILKYIRSGVDGGAKLETGGERLG---AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 388 pl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~---~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
|++++.+++++.++|++++++||++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 314 pli~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~ 387 (466)
T cd07138 314 PLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDE 387 (466)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCcCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCCH
Confidence 999999999999999999999999999996322 35899999999999999999999999999999999985
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. |
| >cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-80 Score=644.88 Aligned_cols=382 Identities=30% Similarity=0.527 Sum_probs=356.7
Q ss_pred eecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHH
Q 012658 69 LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIA 148 (459)
Q Consensus 69 ~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~ 148 (459)
+|||+|+.+ +++++++||.||+++++++.++.+|++++++.|++||. .|++++..+|.++|+++++.|+++.++|+
T Consensus 2 ~i~g~~~~~--~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la 77 (474)
T cd07130 2 VYDGEWGGG--GGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFK--EWRDVPAPKRGEIVRQIGDALRKKKEALG 77 (474)
T ss_pred eECCEEecC--CCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 799999874 57899999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCC-CCceEEEEEccceEEEEEcCCCchHHhhHHHHHHH
Q 012658 149 ALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 227 (459)
Q Consensus 149 ~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 227 (459)
+++++|+|||+.++. .|+..+++.++|+++..+.+.+...+.. .+...+..++|+|||++|+|||||+...++++++|
T Consensus 78 ~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 156 (474)
T cd07130 78 KLVSLEMGKILPEGL-GEVQEMIDICDFAVGLSRQLYGLTIPSERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIA 156 (474)
T ss_pred HHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHhHHHhcCccccCCCCCceEEEEEecceeEEEEccCCCHHHHHHHHhhHH
Confidence 999999999998876 5999999999999988776665544322 24456788999999999999999999999999999
Q ss_pred HhcCCeEEeecCCCchHHHHHHHHH----HHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHH
Q 012658 228 LACGNTIVLKTAEQTPLSALYVSKL----LHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (459)
Q Consensus 228 LaaGN~VVlKps~~~p~~~~~l~~l----l~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a 303 (459)
|++||+||+|||+.+|.++..++++ |.++|+|+|++|+|+|+ .+.+..|++|++||.|.||||+++|+.|++.++
T Consensus 157 LaaGN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~-~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~aa 235 (474)
T cd07130 157 LVCGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGG-ADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVA 235 (474)
T ss_pred HHcCCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCC-hhHHHHHhcCCCCCEEEEECchHHHHHHHHHHH
Confidence 9999999999999999999888766 46999999999999984 457899999999999999999999999999888
Q ss_pred hcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCC
Q 012658 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (459)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~ 383 (459)
+ +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++++
T Consensus 236 ~-~~~~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~ 314 (474)
T cd07130 236 A-RFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDPLDDG 314 (474)
T ss_pred h-cCCCEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHHHHHHHHHHHHHhcCCcCCCCCCC
Confidence 7 889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 384 ~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++||++++.+++++.++|++++++|+++++||.....+|+|++|||+.++++ |++++||+||||++|++|+|+
T Consensus 315 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~~~~-~~i~~eE~FGPvl~v~~~~~~ 388 (474)
T cd07130 315 TLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTIVEGLSD-APIVKEETFAPILYVLKFDTL 388 (474)
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEccEEEecCCC-CHHHhCCCcCCeEEEEEeCCH
Confidence 99999999999999999999999999999999976544689999999998866 999999999999999999985
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. |
| >cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-80 Score=645.16 Aligned_cols=386 Identities=41% Similarity=0.691 Sum_probs=366.1
Q ss_pred eecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHH
Q 012658 69 LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIA 148 (459)
Q Consensus 69 ~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~ 148 (459)
||||+|+...++++++++||.||+++++++.++.+|++++++.|++|+. .|++++..+|.++|+++++.|+++.++|+
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 78 (468)
T cd07088 1 YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQK--AWERLPAIERAAYLRKLADLIRENADELA 78 (468)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 6999999776788999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCC-CCceEEEEEccceEEEEEcCCCchHHhhHHHHHHH
Q 012658 149 ALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 227 (459)
Q Consensus 149 ~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 227 (459)
+++++|+|||..++. .|+..+++.+++++.++++..+...+.. .+...+.+++|+|||++|+|||||+...++++++|
T Consensus 79 ~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 157 (468)
T cd07088 79 KLIVEEQGKTLSLAR-VEVEFTADYIDYMAEWARRIEGEIIPSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPA 157 (468)
T ss_pred HHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhCCccccCccccceeEEEEecceeEEEEccCchHHHHHHHHHHHH
Confidence 999999999999876 5999999999999999887766554433 24567888999999999999999999999999999
Q ss_pred HhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCC
Q 012658 228 LACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 307 (459)
Q Consensus 228 LaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~ 307 (459)
|++||+||+|||+.+|.++..++++|.++|+|+|++|+++|++.+.+..|..|+++|.|.||||+.+|+.|++.+++ ++
T Consensus 158 L~aGN~VVlKps~~~p~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~-~~ 236 (468)
T cd07088 158 LVTGNTIVIKPSEETPLNALEFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAE-NI 236 (468)
T ss_pred HHcCCEEEEECCCcchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cC
Confidence 99999999999999999999999999999999999999999777788999999999999999999999999999887 89
Q ss_pred CceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCccc
Q 012658 308 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQG 387 (459)
Q Consensus 308 ~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~G 387 (459)
+|+++|+|||||+||++|||+|.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|+++++++|
T Consensus 237 ~~~~lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~g 316 (468)
T cd07088 237 TKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMG 316 (468)
T ss_pred CcEEEECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccC-CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 388 PQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 388 pl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
|++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|.+++||+||||++|++|+|+
T Consensus 317 pli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 388 (468)
T cd07088 317 PLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSL 388 (468)
T ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCH
Confidence 999999999999999999999999999997543 46899999999999999999999999999999999985
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. |
| >cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-79 Score=643.31 Aligned_cols=389 Identities=40% Similarity=0.643 Sum_probs=364.2
Q ss_pred ceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHH
Q 012658 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI 147 (459)
Q Consensus 68 ~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l 147 (459)
+||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++||..+.|++++..+|.++|+++++.|++|.++|
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~el 80 (471)
T cd07139 1 LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADEL 80 (471)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEeEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 48999999776678899999999999999999999999999999999998445999999999999999999999999999
Q ss_pred HHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcc-cCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHH
Q 012658 148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT-APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 226 (459)
Q Consensus 148 ~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~-~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 226 (459)
++++++|+|||..++...|+..+++.+++|+..+++..... .+...+...+..++|+|||++|+|||||+...++++++
T Consensus 81 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~i~~ 160 (471)
T cd07139 81 ARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEERRPGSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAP 160 (471)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCceEEEEEEeccEEEEEcCCchHHHHHHHHHHH
Confidence 99999999999877766699999999999999887664322 23223456788999999999999999999999999999
Q ss_pred HHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcC
Q 012658 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306 (459)
Q Consensus 227 ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~ 306 (459)
||++||+||+|||+.+|+++..+.++|.++|+|+|++|+++| +.+.+..|..|++++.|.||||+.+|+.|++.+++ +
T Consensus 161 ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~~~~-~ 238 (471)
T cd07139 161 ALAAGCTVVLKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPA-DREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCGE-R 238 (471)
T ss_pred HHhcCCEEEEECCCcCCHHHHHHHHHHHHcCCCCCcEEEEeC-CHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-c
Confidence 999999999999999999999999999999999999999998 56788999999999999999999999999999887 8
Q ss_pred CCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcc
Q 012658 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQ 386 (459)
Q Consensus 307 ~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~ 386 (459)
++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|+++++++
T Consensus 239 ~~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~ 318 (471)
T cd07139 239 LARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDPLDPATQI 318 (471)
T ss_pred CCEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhCCcCCCCCCCCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccC--CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 387 GPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 387 Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
||++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 319 gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~ 392 (471)
T cd07139 319 GPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDE 392 (471)
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCCH
Confidence 9999999999999999999999999999997533 35899999999999999999999999999999999985
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. |
| >PRK13968 putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-79 Score=640.45 Aligned_cols=374 Identities=25% Similarity=0.396 Sum_probs=350.5
Q ss_pred CCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCCh
Q 012658 80 GKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPF 159 (459)
Q Consensus 80 ~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~ 159 (459)
.++++++||+||++|++++.++.+|++++++.|++||. .|++++..+|.++|+++++.|++|.++|++++++|+|||+
T Consensus 6 ~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 83 (462)
T PRK13968 6 ATHAISVNPATGEQLSVLPWAGADDIENALQLAAAGFR--DWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPI 83 (462)
T ss_pred CCceEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCH
Confidence 35788999999999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred hhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecC
Q 012658 160 EQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239 (459)
Q Consensus 160 ~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps 239 (459)
.++. .|+..+++.++||+..+++..+.......+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 84 ~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~KPs 162 (462)
T PRK13968 84 NQAR-AEVAKSANLCDWYAEHGPAMLKAEPTLVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHA 162 (462)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHhhCCccccCCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECC
Confidence 8876 599999999999998877664332222234567889999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCc
Q 012658 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSP 319 (459)
Q Consensus 240 ~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p 319 (459)
+.+|+++..+++++.++|+|+|++|+|+|++.. +..|+.|+++|.|.||||+++|+.|++.++. +++|+++|+|||||
T Consensus 163 ~~tp~~~~~l~~~~~~aGlP~gv~~~v~g~~~~-~~~l~~~~~v~~V~fTGs~~~G~~i~~~aa~-~l~~~~lElGGk~p 240 (462)
T PRK13968 163 PNVMGCAQLIAQVFKDAGIPQGVYGWLNADNDG-VSQMINDSRIAAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGGSDP 240 (462)
T ss_pred CcChHHHHHHHHHHHHcCcCcCcEEEEecCchh-hHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCcEEEecCCCCc
Confidence 999999999999999999999999999986554 4568899999999999999999999999987 89999999999999
Q ss_pred EEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHH
Q 012658 320 FIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKIL 399 (459)
Q Consensus 320 ~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~ 399 (459)
+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++|+|.++++++||+++..+++++.
T Consensus 241 ~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~ 320 (462)
T PRK13968 241 FIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELH 320 (462)
T ss_pred eEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 400 KYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 400 ~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++|++++++|+++++||.....+|+|++|||+.+++++|.+++||+||||++|++|+|+
T Consensus 321 ~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~ 379 (462)
T PRK13968 321 HQVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDA 379 (462)
T ss_pred HHHHHHHHCCCEEEeCCCcCCCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCH
Confidence 99999999999999999754445899999999999999999999999999999999985
|
|
| >TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-79 Score=646.92 Aligned_cols=389 Identities=32% Similarity=0.511 Sum_probs=364.2
Q ss_pred CccCceecCEeeeCCCCCeeeeeCCC-CCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHH
Q 012658 64 DYTQLLINGQFVDSASGKTFPTLDPR-TGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (459)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~-tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~ 142 (459)
...++||||+|+.+ +.+++++||. ||+++++++.++.+|++++++.|++|++ .|++++..+|.++|+++++.|++
T Consensus 31 ~~~~~~i~g~~~~~--~~~~~~~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~ 106 (511)
T TIGR01237 31 KTYPLYINGEYVET--ENKIDSINPCDPSEVVGKVGKASVEQAEHALQIAKKAFE--AWKKTPVRERAGILRKAAAIMER 106 (511)
T ss_pred cccceeECCEEecC--CCeEEeECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHH
Confidence 44578999999964 4679999999 5999999999999999999999999999 99999999999999999999999
Q ss_pred cHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccC-CCCCceEEEEEccceEEEEEcCCCchHHhhH
Q 012658 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221 (459)
Q Consensus 143 ~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 221 (459)
+.++|++++++|+|||+.++. .|+..+++.++||+..+++..+...+ ...+...+++++|+|||++|+|||||+...+
T Consensus 107 ~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~ 185 (511)
T TIGR01237 107 RRHELNALICLEVGKIIPEAD-AEVAEAIDFCEYYAREMERLAGQGVNLDIEGETNRYFYQPRGVAVVISPWNFPMAIAV 185 (511)
T ss_pred CHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceeEEEECCCCcHHHHHH
Confidence 999999999999999999876 59999999999999998877654332 2234567888999999999999999999999
Q ss_pred HHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHH
Q 012658 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (459)
Q Consensus 222 ~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 301 (459)
+++++||++||+||+|||+.+|+++..++++|.++|+|+|+||+|+|++.+.+..|..|++++.|.||||+.+|+.|++.
T Consensus 186 ~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~ 265 (511)
T TIGR01237 186 GMTVAPIVTGNCVVLKPAETSTVIAAKIVEILIEAGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIYED 265 (511)
T ss_pred HHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999777889999999999999999999999999998
Q ss_pred HHh-----cCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhcc
Q 012658 302 AAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 376 (459)
Q Consensus 302 ~a~-----~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~v 376 (459)
++. .+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++
T Consensus 266 aa~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~ 345 (511)
T TIGR01237 266 AAKVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLSPVYDAVVERFVEATRSLNV 345 (511)
T ss_pred HhcccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEEehhHHHHHHHHHHHHHHhCCC
Confidence 873 378999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecC
Q 012658 377 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGE 456 (459)
Q Consensus 377 G~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~ 456 (459)
|+|.++++++||++++.+++++.++|++++++| ++++||......|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 346 g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~g-~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~~~ 424 (511)
T TIGR01237 346 GPTDDPSTQVGPVIDQKSQAKIQEYIEQGKAEG-ELAIGGCDAPSEGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIRAA 424 (511)
T ss_pred CCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCC-cEEECCccCCCCCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEeeC
Confidence 999999999999999999999999999999999 7899986544568999999999999999999999999999999999
Q ss_pred CC
Q 012658 457 NF 458 (459)
Q Consensus 457 ~~ 458 (459)
|+
T Consensus 425 ~~ 426 (511)
T TIGR01237 425 DF 426 (511)
T ss_pred CH
Confidence 85
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs. |
| >PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-79 Score=637.53 Aligned_cols=371 Identities=32% Similarity=0.495 Sum_probs=349.9
Q ss_pred eeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhh
Q 012658 83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162 (459)
Q Consensus 83 ~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a 162 (459)
++++||.||+++++++.++.+|++++++.|++||. .|+.++.++|.++|++++++|+++.++|++++++|+|||+.++
T Consensus 3 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a 80 (457)
T PRK09406 3 IATINPATGETVKTFTALTDDEVDAAIARAHARFR--DYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLASA 80 (457)
T ss_pred eeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHH
Confidence 67899999999999999999999999999999999 9999999999999999999999999999999999999999997
Q ss_pred hhcchHHHHHHHHHHHHhhhhhcCcccCC---CCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecC
Q 012658 163 AQTEVPMTTRLFRYYAGWADKIQGLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239 (459)
Q Consensus 163 ~~~ev~~~~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps 239 (459)
. .|+..+++.++||+..+++..+..... ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||
T Consensus 81 ~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps 159 (457)
T PRK09406 81 K-AEALKCAKGFRYYAEHAEALLADEPADAAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHA 159 (457)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECC
Confidence 5 599999999999999888765433221 123467889999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCc
Q 012658 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSP 319 (459)
Q Consensus 240 ~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p 319 (459)
+.+|+++.+++++|.++|+|+|+||+|++ +.+.+..|+.|++++.|.||||+++|+.|++.+++ +++|+++|+|||||
T Consensus 160 ~~~p~~~~~l~~l~~~aGlP~gvv~~v~~-g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~~-~~~~~~lElGG~~~ 237 (457)
T PRK09406 160 SNVPQTALYLADLFRRAGFPDGCFQTLLV-GSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGD-EIKKTVLELGGSDP 237 (457)
T ss_pred CcCcHHHHHHHHHHHHhCCCcCcEEEEcC-CchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh-cCCceeeecCCCCe
Confidence 99999999999999999999999999986 44567889999999999999999999999998887 89999999999999
Q ss_pred EEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHH
Q 012658 320 FIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKIL 399 (459)
Q Consensus 320 ~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~ 399 (459)
+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.
T Consensus 238 ~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~ 317 (457)
T PRK09406 238 FIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVE 317 (457)
T ss_pred eEECCCCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCcCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 400 KYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 400 ~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++|++++++|+++++||...+.+|+|++|||+.+++++|.+++||+||||++|++|+|+
T Consensus 318 ~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 376 (457)
T PRK09406 318 KQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADI 376 (457)
T ss_pred HHHHHHHHCCCEEEeCCCcCCCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCH
Confidence 99999999999999999765556999999999999999999999999999999999984
|
|
| >cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-79 Score=639.17 Aligned_cols=380 Identities=44% Similarity=0.729 Sum_probs=359.4
Q ss_pred ccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 012658 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (459)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~ 144 (459)
..++||||+|+.+.++++++++||.||+++++++.++.+|++++++.|+++|. .|++++..+|.++|+++++.|+++.
T Consensus 21 ~~~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~a~~~~v~~ai~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 98 (480)
T cd07111 21 SFGHFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFE--SWSALPGHVRARHLYRIARHIQKHQ 98 (480)
T ss_pred cccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhH
Confidence 44789999999866678899999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHH
Q 012658 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (459)
Q Consensus 145 ~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 224 (459)
++|++++++|+|||+.+++..|+..+++.+++++.+++...+ .+..++|+|||++|+|||||+...++++
T Consensus 99 ~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~----------~~~~~~P~GVV~~I~PwN~P~~~~~~~i 168 (480)
T cd07111 99 RLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLDT----------ELAGWKPVGVVGQIVPWNFPLLMLAWKI 168 (480)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC----------CcccceecceEEEECCCccHHHHHHHHH
Confidence 999999999999999988766999999999999888765432 1345799999999999999999999999
Q ss_pred HHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHh
Q 012658 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304 (459)
Q Consensus 225 ~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~ 304 (459)
++||++||+||+|||+.+|.++..|++++.++|+|+|++|+|+|++ +.+..|..|+++|.|.||||+.+|+.|++.+++
T Consensus 169 ~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~-~~~~~l~~~~~v~~v~ftGs~~~g~~v~~~aa~ 247 (480)
T cd07111 169 CPALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPGVLNIVTGNG-SFGSALANHPGVDKVAFTGSTEVGRALRRATAG 247 (480)
T ss_pred HHHHHcCCEEEEECCCCChHHHHHHHHHHHhcCCCcccEEEEeCCc-hHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999854 678999999999999999999999999999887
Q ss_pred cCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCC
Q 012658 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384 (459)
Q Consensus 305 ~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~ 384 (459)
+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|+++++
T Consensus 248 -~~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~ 326 (480)
T cd07111 248 -TGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRVGDPLDKAI 326 (480)
T ss_pred -cCCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 8899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 385 ~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++||++++.+++++.++|++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 327 ~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~ 400 (480)
T cd07111 327 DMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTA 400 (480)
T ss_pred ccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcCCCCCCeeEeecCCCH
Confidence 99999999999999999999999999999998654456899999999999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. |
| >cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-79 Score=640.32 Aligned_cols=387 Identities=42% Similarity=0.674 Sum_probs=364.9
Q ss_pred ceecCEeeeCCCCCeeeeeCCCC-CCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 012658 68 LLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (459)
Q Consensus 68 ~~I~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~ 146 (459)
+||||+|+.+.++++++++||.| ++++++++.++.+|++++++.|++|+. .|++++..+|.++|+++++.|+++.++
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~l~~~a~~l~~~~~e 78 (478)
T cd07131 1 NYIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFP--EWRKVPAPRRAEYLFRAAELLKKRKEE 78 (478)
T ss_pred CcCCCEeecCCCCCeEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 48999999766678999999999 689999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCC-CCceEEEEEccceEEEEEcCCCchHHhhHHHHH
Q 012658 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225 (459)
Q Consensus 147 l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 225 (459)
|++++++|+|||+.++. .|+..+++.+++++...+.+.+...+.. .+...+.+++|+|||++|+|||||+...+++++
T Consensus 79 la~~~~~e~Gk~~~~~~-~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~ 157 (478)
T cd07131 79 LARLVTREMGKPLAEGR-GDVQEAIDMAQYAAGEGRRLFGETVPSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIF 157 (478)
T ss_pred HHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhCCcccccCCCCceEEEEeeceeEEEEECCcCcHHHHHHHHHH
Confidence 99999999999999876 4999999999999998887665544322 234578899999999999999999999999999
Q ss_pred HHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhc
Q 012658 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305 (459)
Q Consensus 226 ~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~ 305 (459)
+||++||+||+|||+.+|+++..++++|.++|+|+|+||+++|.+.+.+..|..|++||.|.||||+.+|+.|++.+++
T Consensus 158 ~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~- 236 (478)
T cd07131 158 PALVCGNTVVFKPAEDTPACALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCAR- 236 (478)
T ss_pred HHHHcCCEEEEECCCcCcHHHHHHHHHHHhcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-
Confidence 9999999999999999999999999999999999999999999777789999999999999999999999999999887
Q ss_pred CCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCc
Q 012658 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 385 (459)
Q Consensus 306 ~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~ 385 (459)
+++|+++|+|||||+||++|||+|.|++.+++++|+|+||.|+++++||||+++||+|+++|+++++++++|+|.+++++
T Consensus 237 ~~~~~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~ 316 (478)
T cd07131 237 PNKRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDEETD 316 (478)
T ss_pred cCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhHHHHHHHHHHHHHhcCCCCCCCCCCc
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccC----CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 386 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 386 ~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+||++++.+++++.++|++++++|+++++||.... .+|+|++|||+.+++++|+++++|+||||++|++|+|+
T Consensus 317 ~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~ 393 (478)
T cd07131 317 MGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSL 393 (478)
T ss_pred CCcCCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCCH
Confidence 99999999999999999999999999999996532 36899999999999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. |
| >cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-79 Score=642.41 Aligned_cols=388 Identities=32% Similarity=0.504 Sum_probs=363.7
Q ss_pred CCCccCceecCEeeeCCCCCeeeeeCCC-CCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHH
Q 012658 62 KVDYTQLLINGQFVDSASGKTFPTLDPR-TGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLL 140 (459)
Q Consensus 62 ~~~~~~~~I~G~~~~~~~~~~~~v~~P~-tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l 140 (459)
.+...++||||+|+. ++.+++++||. ||+++++++.++.+|++++++.|++||+ .|+.++..+|.++|+++++.|
T Consensus 15 ~~~~~~~~i~g~~~~--~~~~~~~~~P~~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l 90 (500)
T cd07083 15 FGRAYPLVIGGEWVD--TKERMVSVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFK--TWKDWPQEDRARLLLKAADLL 90 (500)
T ss_pred ccccccceECCEEec--CCCceEeeCCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHH
Confidence 344557899999986 45679999998 6999999999999999999999999999 999999999999999999999
Q ss_pred HHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCccc--CCCCCceEEEEEccceEEEEEcCCCchHH
Q 012658 141 ERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA--PADGPYHVQTLHEPIGVAGQIIPWNFPLL 218 (459)
Q Consensus 141 ~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~--~~~~~~~~~~~~~P~GVv~~i~p~n~P~~ 218 (459)
+++.++|++++++|+|||+.++. .|+..+++.+++|+.++.+..+... +...+...++.++|+|||++|+|||||+.
T Consensus 91 ~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~ 169 (500)
T cd07083 91 RRRRRELIATLTYEVGKNWVEAI-DDVAEAIDFIRYYARAALRLRYPAVEVVPYPGEDNESFYVGLGAGVVISPWNFPVA 169 (500)
T ss_pred HhCHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCCceEEEEEeccceEEEEcCCccHHH
Confidence 99999999999999999999865 5999999999999999887765432 22235567888999999999999999999
Q ss_pred hhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHH
Q 012658 219 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 298 (459)
Q Consensus 219 ~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 298 (459)
..++++++||++||+||+|||+.+|.++..++++|.++|+|+|+||+|+|++.+.+..|..|+++|.|.||||+.+|+.|
T Consensus 170 ~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~v 249 (500)
T cd07083 170 IFTGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKI 249 (500)
T ss_pred HHHHHHHHHHHcCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999778889999999999999999999999999
Q ss_pred HHHHHhcCC------CceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHH
Q 012658 299 LQLAAKSNL------KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAM 372 (459)
Q Consensus 299 ~~~~a~~~~------~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~ 372 (459)
.+.+++ ++ +|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++
T Consensus 250 ~~~aa~-~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~ 328 (500)
T cd07083 250 YEAAAR-LAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPVLERLLKRAE 328 (500)
T ss_pred HHHHhh-ccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHH
Confidence 999887 54 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEE
Q 012658 373 KRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHT 452 (459)
Q Consensus 373 ~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v 452 (459)
++++|+|.++++++||++++.+++++.++|++++++| ++++||......|+|++|||+.+++++|++++||+||||++|
T Consensus 329 ~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g-~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v 407 (500)
T cd07083 329 RLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSV 407 (500)
T ss_pred cCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-EEEeCCCcCCCCCeEEccEEEeCCCCCChHhhCCCCCceEEE
Confidence 9999999999999999999999999999999999888 899999765556899999999999999999999999999999
Q ss_pred EecC
Q 012658 453 FNGE 456 (459)
Q Consensus 453 ~~~~ 456 (459)
++|+
T Consensus 408 ~~~~ 411 (500)
T cd07083 408 IRYK 411 (500)
T ss_pred EEeC
Confidence 9999
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. |
| >TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-79 Score=638.33 Aligned_cols=385 Identities=30% Similarity=0.433 Sum_probs=357.2
Q ss_pred ceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHH
Q 012658 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI 147 (459)
Q Consensus 68 ~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l 147 (459)
+||||+|+.. ++++++++||.||++|++++.++.+|++++++.|++||+ .|++++..+|.++|+++++.|++|.++|
T Consensus 1 ~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el 77 (484)
T TIGR03240 1 LFIDGKWRAG-QGESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFP--AWARLSLEERIAVVQRFAALLEERKEAL 77 (484)
T ss_pred CeECCEEecC-CCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 4899999865 578899999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHH
Q 012658 148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 227 (459)
Q Consensus 148 ~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 227 (459)
++++++|+|||..++. .|+..+++.+++++...+...+...+...+...++.++|+|||++|+|||||+...++++++|
T Consensus 78 a~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~A 156 (484)
T TIGR03240 78 ARVIARETGKPLWETR-TEVASMIGKVAISIKAYHERTGESENPMPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPA 156 (484)
T ss_pred HHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEecccEEEEECCCchHHHHHHHHHHHH
Confidence 9999999999998876 599999999999888776655543322223456788999999999999999999999999999
Q ss_pred HhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCC
Q 012658 228 LACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 307 (459)
Q Consensus 228 LaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~ 307 (459)
|++||+||+|||+.+|+++..+++++.++|+|+|+||+|+| +.+.+..|..|+++|.|.||||+++|+.|++.++....
T Consensus 157 LaaGN~VVlKPs~~tp~t~~~l~~~~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~aa~~~~ 235 (484)
T TIGR03240 157 LLAGNTVVFKPSELTPWVAEETVKLWEKAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPE 235 (484)
T ss_pred HHcCCEEEEECCccccHHHHHHHHHHHHhCcCcccEEEEeC-CHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhcCC
Confidence 99999999999999999999999999999999999999998 56789999999999999999999999999998876457
Q ss_pred CceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcch-HHHHHHHHHHHHhhccCCC-CCCCCc
Q 012658 308 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY-DQFVEKANALAMKRVVGDP-FKGGIQ 385 (459)
Q Consensus 308 ~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~-d~f~~~l~~~~~~~~vG~p-~~~~~~ 385 (459)
+++++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++ |+|+++|+++++++++|+| .+++++
T Consensus 236 ~~~~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~ 315 (484)
T TIGR03240 236 KILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLVEVAERLTVGAWDAEPQPF 315 (484)
T ss_pred CcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccHHHHHHHHHHHHHhcccCCCCcCCCCc
Confidence 88999999999999999999999999999999999999999999999999985 9999999999999999997 578899
Q ss_pred ccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 386 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 386 ~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+||+++..+++++.++|++++++|+++++||......|+|++|||+ +++++|.+++||+||||++|++|+|+
T Consensus 316 ~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~i~PTvl-~v~~~~~i~~eE~FGPVl~v~~~~~~ 387 (484)
T TIGR03240 316 MGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALLTPGII-DVTGVAELPDEEHFGPLLQVIRYDDF 387 (484)
T ss_pred ccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCEEEcCEEE-ccCCCCHHHhCCCcCCeEEEEEeCCH
Confidence 9999999999999999999999999999988654446899999999 69999999999999999999999984
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism. |
| >cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-79 Score=637.38 Aligned_cols=380 Identities=37% Similarity=0.583 Sum_probs=359.2
Q ss_pred CEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHH
Q 012658 72 GQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALE 151 (459)
Q Consensus 72 G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~ 151 (459)
|+|+.+.++.+++++||+||+++++++.++.+|++++++.|++|+. .|++++..+|.++|++++++|+++.++|++++
T Consensus 1 g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~ 78 (465)
T cd07151 1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQK--EWAATLPQERAEILEKAAQILEERRDEIVEWL 78 (465)
T ss_pred CCceeCCCCCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 6787765677899999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred HHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCC-CCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhc
Q 012658 152 TWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALAC 230 (459)
Q Consensus 152 ~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaa 230 (459)
++|+|||+.++.. |+..+++.++|++.+.++..+...+.. .+...+..++|+|||++|+|||||+...++++++||++
T Consensus 79 ~~e~Gk~~~~a~~-Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaa 157 (465)
T cd07151 79 IRESGSTRIKANI-EWGAAMAITREAATFPLRMEGRILPSDVPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALAL 157 (465)
T ss_pred HHHcCCCHHHHHH-HHHHHHHHHHHHHHhHHHhcCccccCCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHc
Confidence 9999999988764 999999999999998877766554432 34557788999999999999999999999999999999
Q ss_pred CCeEEeecCCCchHHH-HHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCc
Q 012658 231 GNTIVLKTAEQTPLSA-LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKP 309 (459)
Q Consensus 231 GN~VVlKps~~~p~~~-~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~p 309 (459)
||+||+|||+.+|.++ ..+.++|.++|+|+|+||+|+|++.+.+..|+.|+.++.|.||||+.+|+.|++.+++ +++|
T Consensus 158 GN~Vi~Kps~~~p~~~~~~l~~~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~~~~ 236 (465)
T cd07151 158 GNAVVLKPASDTPITGGLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGR-HLKK 236 (465)
T ss_pred CCEEEEECCCCCcHhHHHHHHHHHHHcCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCc
Confidence 9999999999999996 7899999999999999999999777889999999999999999999999999999987 8999
Q ss_pred eEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCccccc
Q 012658 310 VTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQ 389 (459)
Q Consensus 310 v~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl 389 (459)
+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||+
T Consensus 237 ~~lElGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl 316 (465)
T cd07151 237 VALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVGPL 316 (465)
T ss_pred EEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 390 IDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 390 ~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++.+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 317 i~~~~~~~v~~~v~~a~~~ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 382 (465)
T cd07151 317 INESQVDGLLDKIEQAVEEGATLLVGGEA---EGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDE 382 (465)
T ss_pred cCHHHHHHHHHHHHHHHhCCCEEEecCCc---CCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCH
Confidence 99999999999999999999999999964 4899999999999999999999999999999999985
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. |
| >TIGR01780 SSADH succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-79 Score=636.40 Aligned_cols=370 Identities=37% Similarity=0.649 Sum_probs=351.0
Q ss_pred eeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhh
Q 012658 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (459)
Q Consensus 85 v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~ 164 (459)
++||.||+++++++.++.+|++.+++.|++|++ .|++++..+|.++|+++++.|+++.++|++++++|+|||+.++.
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~- 77 (448)
T TIGR01780 1 VYNPATGEIIGTVPDQGVEEAEAAIRAAYEAFK--TWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLKEAK- 77 (448)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-
Confidence 479999999999999999999999999999999 99999999999999999999999999999999999999999876
Q ss_pred cchHHHHHHHHHHHHhhhhhcCcccCCC-CCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCch
Q 012658 165 TEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243 (459)
Q Consensus 165 ~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p 243 (459)
.|+..+++.++|++...++..+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 78 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p 157 (448)
T TIGR01780 78 GEILYAASFLEWFAEEAKRVYGDTIPSPQSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTP 157 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccch
Confidence 5999999999999988877766554432 344567789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCcEEeecCC-ChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEE
Q 012658 244 LSALYVSKLLHEAGLPPGVLNIVSGY-GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 322 (459)
Q Consensus 244 ~~~~~l~~ll~~aGlP~g~v~vv~g~-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV 322 (459)
+++..++++|.++|+|+|++|+|+|+ +.+.+..|+.|++++.|.||||+.+|+.|++.++. +++|+++|+|||||+||
T Consensus 158 ~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa~-~~~~~~lElGGk~~~iV 236 (448)
T TIGR01780 158 LSALALARLAEQAGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSAS-TVKKVSMELGGNAPFIV 236 (448)
T ss_pred HHHHHHHHHHHHcCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCCceEeecCCCCeeEE
Confidence 99999999999999999999999997 67888999999999999999999999999999887 78999999999999999
Q ss_pred ccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHH
Q 012658 323 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 402 (459)
Q Consensus 323 ~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i 402 (459)
++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.+++++.++|
T Consensus 237 ~~dadl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i 316 (448)
T TIGR01780 237 FDDADIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHI 316 (448)
T ss_pred CCCCCHHHHHHHHHHHHHHhcCCcccCCceeechHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 403 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 403 ~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 317 ~~a~~~Ga~il~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~ 372 (448)
T TIGR01780 317 ADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDE 372 (448)
T ss_pred HHHHHCCCEEEeCCCcCCCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCH
Confidence 99999999999999765446899999999999999999999999999999999985
|
SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070). |
| >PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-79 Score=642.70 Aligned_cols=387 Identities=34% Similarity=0.554 Sum_probs=361.9
Q ss_pred ccCceecCEeeeCCCCCeeeeeCCC-CCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHc
Q 012658 65 YTQLLINGQFVDSASGKTFPTLDPR-TGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (459)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~-tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~ 143 (459)
..++||||+|+.+ +.+++++||+ ||+++++++.++.+|++++++.|++|+. .|++++..+|.++|++++++|+++
T Consensus 36 ~~~~~i~g~~~~~--~~~~~~~~P~~t~~~i~~~~~a~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~ 111 (514)
T PRK03137 36 DYPLIIGGERITT--EDKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFE--TWKKWSPEDRARILLRAAAIIRRR 111 (514)
T ss_pred ccceeECCEEecC--CCeeEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHC
Confidence 4468999999963 6789999999 6999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhc-CcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHH
Q 012658 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ-GLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (459)
Q Consensus 144 ~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (459)
.++|++++++|+|||+.++. .|+..+++.++||+..+++.. +.......+...+++++|+|||++|+|||||+...++
T Consensus 112 ~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 190 (514)
T PRK03137 112 KHEFSAWLVKEAGKPWAEAD-ADTAEAIDFLEYYARQMLKLADGKPVESRPGEHNRYFYIPLGVGVVISPWNFPFAIMAG 190 (514)
T ss_pred HHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccCCCCceEEEEEecCcEEEEECCCccHHHHHHH
Confidence 99999999999999999986 499999999999999887764 3222222345678899999999999999999999999
Q ss_pred HHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHH
Q 012658 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (459)
Q Consensus 223 ~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~ 302 (459)
++++||++||+||+|||+.+|+++..|+++|.++|+|+|+||+++|++.+.+..|..|++|+.|.||||+.+|+.|++.+
T Consensus 191 ~i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~a 270 (514)
T PRK03137 191 MTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERA 270 (514)
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999997778899999999999999999999999999988
Q ss_pred Hhc-----CCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccC
Q 012658 303 AKS-----NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 377 (459)
Q Consensus 303 a~~-----~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG 377 (459)
++. ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|
T Consensus 271 a~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g 350 (514)
T PRK03137 271 AKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLEKVVELTKELTVG 350 (514)
T ss_pred hcccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeHHHHHHHHHHHHHHHHhCCCC
Confidence 752 689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCC
Q 012658 378 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGEN 457 (459)
Q Consensus 378 ~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~ 457 (459)
+|.++. ++||++++.+++++.++|++++++ +++++||......|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 351 ~p~~~~-~~Gpli~~~~~~~v~~~v~~a~~~-~~vl~Gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~ 428 (514)
T PRK03137 351 NPEDNA-YMGPVINQASFDKIMSYIEIGKEE-GRLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAKD 428 (514)
T ss_pred CCCCcc-CcCCCCCHHHHHHHHHHHHHHHhC-CEEEeCCCcCCCCceEEeeEEEeCCCCCCHHHhCCCCCceEEEEecCC
Confidence 999998 999999999999999999999887 599999976545689999999999999999999999999999999998
Q ss_pred C
Q 012658 458 F 458 (459)
Q Consensus 458 ~ 458 (459)
+
T Consensus 429 ~ 429 (514)
T PRK03137 429 F 429 (514)
T ss_pred H
Confidence 5
|
|
| >TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-78 Score=636.94 Aligned_cols=386 Identities=30% Similarity=0.481 Sum_probs=363.4
Q ss_pred CceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 012658 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (459)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~ 146 (459)
++||||+|+.+.++++++++||.||++|++++.++.+|++++++.|++|++ .|++++..+|.++|+++++.|+++.++
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~ai~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~ 79 (477)
T TIGR01722 2 NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFL--TWGQTSLAQRTSVLLRYQALLKEHRDE 79 (477)
T ss_pred ceeECCEEecCCCCCeEeeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 579999999876678999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCC-CCceEEEEEccceEEEEEcCCCchHHhhHHHHH
Q 012658 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225 (459)
Q Consensus 147 l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 225 (459)
|+++++.|+|||+.++. .|+..+++.++|++...+.+.+...+.. .+...+.+++|+|||++|+|||||+...+++++
T Consensus 80 l~~~~~~e~Gk~~~~a~-~ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~ 158 (477)
T TIGR01722 80 IAELITAEHGKTHSDAL-GDVARGLEVVEHACGVNSLLKGETSTQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFP 158 (477)
T ss_pred HHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEcccceEEEEccCChHHHHHHHHHH
Confidence 99999999999999876 5999999999999988887766554322 344567899999999999999999999999999
Q ss_pred HHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhc
Q 012658 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305 (459)
Q Consensus 226 ~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~ 305 (459)
+||++||+||+|||+.+|.++..++++|.++|+|+|++|+|+| +.+.+..|+.|++|+.|+||||+.+|+.|.+.++.
T Consensus 159 ~ALaaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~~~~v~g-~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~a~~- 236 (477)
T TIGR01722 159 IAIACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHG-DKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSA- 236 (477)
T ss_pred HHHhcCCEEEeeCcccChHHHHHHHHHHHHhCcCCCeEEEEeC-CHHHHHHHHcCCCcCEEEEECCHHHHHHHHHHHHh-
Confidence 9999999999999999999999999999999999999999998 45678899999999999999999999999998887
Q ss_pred CCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCc
Q 012658 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 385 (459)
Q Consensus 306 ~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~ 385 (459)
++||+++|+||+||+||++|||+|.|++.+++++|.|+||.|++++|||||+++ |+|+++|+++++++++|+|.+++++
T Consensus 237 ~~~~v~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~-~~f~~~l~~~~~~~~~G~~~~~~~~ 315 (477)
T TIGR01722 237 HGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-DEWVPEIRERAEKIRIGPGDDPGAE 315 (477)
T ss_pred cCCeEEEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcH-HHHHHHHHHHHhcCCCCCCCCCCCC
Confidence 889999999999999999999999999999999999999999999999999998 9999999999999999999999999
Q ss_pred ccccCCHHHHHHHHHHHHHHHhCCCeEEeCCccc--C--CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 386 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL--G--AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 386 ~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~--~--~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+||++++.+++++.++|++++++|+++++||... . .+|+|++|||+.+++++|.+++||+||||++|++|+|+
T Consensus 316 ~Gp~i~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~~ 392 (477)
T TIGR01722 316 MGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTL 392 (477)
T ss_pred cCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCCH
Confidence 9999999999999999999999999999999752 1 35899999999999999999999999999999999985
|
In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus. |
| >cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-79 Score=640.13 Aligned_cols=382 Identities=25% Similarity=0.291 Sum_probs=346.3
Q ss_pred CceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHh-ccCCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 012658 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKA-FDEGPWPRMTAYERSKIILRFADLLERHND 145 (459)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A-~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~ 145 (459)
++||||+|+.+ ++++++++||.||+++++++.++ +|+++|++.|++| |+ .|++++..+|.++|+++++.|++|++
T Consensus 2 ~~~I~g~~~~~-~~~~~~~~nP~tg~~~~~~~~~~-~dv~~Av~~A~~A~~~--~W~~~~~~~Ra~~L~~~a~~l~~~~~ 77 (513)
T cd07128 2 QSYVAGQWHAG-TGDGRTLHDAVTGEVVARVSSEG-LDFAAAVAYAREKGGP--ALRALTFHERAAMLKALAKYLMERKE 77 (513)
T ss_pred ceeECCEEEcC-CCCEEEeECCCCCCEEEEEcCCH-HHHHHHHHHHHHhhhc--hhhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 67999999976 46889999999999999999876 8999999999997 68 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcC--------cccCCCC-C-ceEEEEEcc-ceEEEEEcCCC
Q 012658 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG--------LTAPADG-P-YHVQTLHEP-IGVAGQIIPWN 214 (459)
Q Consensus 146 ~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~--------~~~~~~~-~-~~~~~~~~P-~GVv~~i~p~n 214 (459)
+|+++ +.|+|||+.++. .|+..+++.++||++++++..+ ...+... + ...++.++| +|||++|+|||
T Consensus 78 ~la~l-~~e~Gkp~~ea~-~Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN 155 (513)
T cd07128 78 DLYAL-SAATGATRRDSW-IDIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFN 155 (513)
T ss_pred HHHHH-HHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHhhccccccccCCcccccCCCccccceEEEEecccEEEEECCcc
Confidence 99996 899999998876 5999999999999998877542 2222211 1 235677999 59999999999
Q ss_pred chHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcC-CCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChH
Q 012658 215 FPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 293 (459)
Q Consensus 215 ~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aG-lP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~ 293 (459)
||+...++++++||++||+||+|||+.+|+++..|++++.++| +|+|++|+|+|++.+++..| +.+|+|.||||++
T Consensus 156 ~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaG~lP~gv~~~v~g~~~~~~~~l---~~~d~v~fTGS~~ 232 (513)
T cd07128 156 FPVWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICGSVGDLLDHL---GEQDVVAFTGSAA 232 (513)
T ss_pred cHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCCCCCCcEEEecCChHHHhccc---CCCCEEEEECCHH
Confidence 9999999999999999999999999999999999999999999 99999999998644444333 5789999999999
Q ss_pred HHHHHHHHHH-hcCCCceEEecCCcCcEEEccCCC-----HHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHH
Q 012658 294 TGKIVLQLAA-KSNLKPVTLELGGKSPFIVCEDAD-----VDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 367 (459)
Q Consensus 294 ~g~~i~~~~a-~~~~~pv~lelgG~~p~iV~~dAD-----ld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l 367 (459)
+|+.|++.++ ..+++|+++|+|||||+||++||| +|.+++.+++++|.|+||.|++++|+|||+++||+|+++|
T Consensus 233 ~G~~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l 312 (513)
T cd07128 233 TAAKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEAL 312 (513)
T ss_pred HHHHHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEEEehHHHHHHHHHH
Confidence 9999999863 237899999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCccc-------CCCCceEecEEEeeCCCC--C
Q 012658 368 NALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL-------GAKGYYIKPTVFTGVKVL--I 438 (459)
Q Consensus 368 ~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~-------~~~g~~~~PTvl~~v~~~--~ 438 (459)
+++++++++|+|+++++++||++++.+++++.++|++++++ |++++||... ...|+|++|||+.+++++ |
T Consensus 313 ~~~~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~-A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~ 391 (513)
T cd07128 313 KARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAE-AEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAAT 391 (513)
T ss_pred HHHHHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhC-CEEEECCCccccccCCCCCCCEEECCEEEeccCCcccc
Confidence 99999999999999999999999999999999999999988 9999999652 135899999999999874 8
Q ss_pred CCcCcCCCcceEEEEecCCC
Q 012658 439 LISPASISPNILHTFNGENF 458 (459)
Q Consensus 439 ~i~~~EifgPvl~v~~~~~~ 458 (459)
.+++||+||||++|++|+|+
T Consensus 392 ~i~~eE~FGPVl~V~~~~~~ 411 (513)
T cd07128 392 AVHDVEAFGPVATLMPYDSL 411 (513)
T ss_pred hHHhCCCcCCeEEEEeeCCH
Confidence 99999999999999999985
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. |
| >TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-78 Score=631.99 Aligned_cols=378 Identities=33% Similarity=0.458 Sum_probs=354.2
Q ss_pred CceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 012658 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (459)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~ 146 (459)
++||||+|+. ++++++++||+||+++++++.++.+|+++|++.|++++. .++..+|.++|++++++|+++.++
T Consensus 5 ~~~i~g~~~~--~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~-----~~~~~~R~~~l~~~a~~l~~~~~e 77 (472)
T TIGR03250 5 ALRIAGEKVS--RDRVIEVRYPYNGTVVGTVPKASVDDVRRAFAIAAAYRP-----TLTRYERSAILDRAAALLAARKEE 77 (472)
T ss_pred CceECCEEec--CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHh-----hCCHHHHHHHHHHHHHHHHHhHHH
Confidence 6899999985 467899999999999999999999999999999988764 689999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccC-----CCCCceEEEEEccc-eEEEEEcCCCchHHhh
Q 012658 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-----ADGPYHVQTLHEPI-GVAGQIIPWNFPLLMF 220 (459)
Q Consensus 147 l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~-----~~~~~~~~~~~~P~-GVv~~i~p~n~P~~~~ 220 (459)
|++++++|+|||+.++. .|+..+++.++|++..+++..+...+ ...+...+..++|+ |||++|+|||||+...
T Consensus 78 la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~~ 156 (472)
T TIGR03250 78 ISDLITLESGLSKKDSL-YEVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQV 156 (472)
T ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHHH
Confidence 99999999999999876 59999999999999988776554332 11234567899998 9999999999999999
Q ss_pred HHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHH
Q 012658 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (459)
Q Consensus 221 ~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 300 (459)
++++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+++|++.+.+..|+.|++++.|.||||+.+|+.|++
T Consensus 157 ~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 236 (472)
T TIGR03250 157 AHKIAPAIATNNRMVVKPSEKTPLSALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAA 236 (472)
T ss_pred HHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999977788999999999999999999999999998
Q ss_pred HHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCC
Q 012658 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380 (459)
Q Consensus 301 ~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~ 380 (459)
.++ ++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.
T Consensus 237 ~a~---~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~ 313 (472)
T TIGR03250 237 RAG---YRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDPM 313 (472)
T ss_pred Hhc---CCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCC
Confidence 764 68999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 381 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 381 ~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++++++||++++.+++++.++|++++++||++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 314 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~---~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~~ 388 (472)
T TIGR03250 314 DPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVR---DGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDI 388 (472)
T ss_pred CCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCc---CCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCCH
Confidence 99999999999999999999999999999999999964 4899999999999999999999999999999999985
|
It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. |
| >cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-78 Score=626.24 Aligned_cols=371 Identities=34% Similarity=0.536 Sum_probs=349.8
Q ss_pred eeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhh
Q 012658 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (459)
Q Consensus 85 v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~ 164 (459)
++||+||+++++++.++.+|+++|++.|++||..+.|+. +..+|.++|+++++.|++|+++|++++++|+|||+.++.
T Consensus 1 ~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~- 78 (455)
T cd07120 1 SIDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKILGEAR- 78 (455)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-
Confidence 479999999999999999999999999999998434998 999999999999999999999999999999999999986
Q ss_pred cchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchH
Q 012658 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244 (459)
Q Consensus 165 ~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~ 244 (459)
.|+..+++.++||+..+++..+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus 79 ~Ev~~~i~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~~~ 158 (455)
T cd07120 79 FEISGAISELRYYAGLARTEAGRMIEPEPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQ 158 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeECCCCChH
Confidence 49999999999999998887665443333456789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH-cCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEc
Q 012658 245 SALYVSKLLHE-AGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 323 (459)
Q Consensus 245 ~~~~l~~ll~~-aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~ 323 (459)
++..++++|.+ +|+|+|++|+|+|++.+.+..|.+|++++.|.||||+.+|+.|++.+++ +++|+++|+|||||+||+
T Consensus 159 ~~~~l~~~~~~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~~~~~~lElGG~~~~IV~ 237 (455)
T cd07120 159 INAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAP-TLKRLGLELGGKTPCIVF 237 (455)
T ss_pred HHHHHHHHHHHhcCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeEEEECCCCCeeEEC
Confidence 99999999999 7999999999999777889999999999999999999999999999887 789999999999999999
Q ss_pred cCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHH
Q 012658 324 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 403 (459)
Q Consensus 324 ~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~ 403 (459)
+|||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|+
T Consensus 238 ~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~ 317 (455)
T cd07120 238 DDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVE 317 (455)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCCcCCccCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCeEEeCCcccC---CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 404 SGVDGGAKLETGGERLG---AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 404 ~a~~~Ga~v~~gg~~~~---~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++++|+++++||.... .+|+|++|||+.++++||++++||+||||++|++|+|+
T Consensus 318 ~a~~~ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~~ 375 (455)
T cd07120 318 RAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDE 375 (455)
T ss_pred HHHHCCCEEEeCCccCcccCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCCH
Confidence 99999999999875432 26899999999999999999999999999999999985
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. |
| >TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-78 Score=649.03 Aligned_cols=382 Identities=24% Similarity=0.314 Sum_probs=348.4
Q ss_pred CceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHh-ccCCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 012658 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKA-FDEGPWPRMTAYERSKIILRFADLLERHND 145 (459)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A-~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~ 145 (459)
++||||+|+.+ ++++++++||.||+++++++.++ .|+++|++.|++| |+ .|++++..+|.++|++++++|+++.+
T Consensus 2 ~~~i~g~~~~~-~~~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~~A~~aa~~--~W~~~~~~eR~~~L~~~a~~l~~~~~ 77 (663)
T TIGR02278 2 QSYLSGEWRTG-QGEGVPVRDASTGEVLARVTSEG-LDVAAAVAWAREVGGP--ALRALTFHERARMLKALAQYLSERKE 77 (663)
T ss_pred ceeECCEEEcC-CCCeEeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhcch--hhhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 57999999875 36789999999999999999999 5999999999996 88 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhc--------CcccCCC--CCceEEEEEccc-eEEEEEcCCC
Q 012658 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ--------GLTAPAD--GPYHVQTLHEPI-GVAGQIIPWN 214 (459)
Q Consensus 146 ~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~--------~~~~~~~--~~~~~~~~~~P~-GVv~~i~p~n 214 (459)
+|++ +++|+|||+.++. .|+..+++.++||+..+++.. +...+.. .+...++.++|+ |||++|+|||
T Consensus 78 ela~-~~~e~GK~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~Gvv~~I~pwN 155 (663)
T TIGR02278 78 ALYA-LAATTGATRRDNW-VDIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFN 155 (663)
T ss_pred HHHH-HHHHcCCCHHHHH-HHHHHHHHHHHHHHHhhhhhccccccccCCceeccCCCCccceEEEEEeCCceEEEEcCCc
Confidence 9999 5999999999876 599999999999999887632 3333322 123567899997 9999999999
Q ss_pred chHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcC-CCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChH
Q 012658 215 FPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 293 (459)
Q Consensus 215 ~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aG-lP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~ 293 (459)
||+...++++++||++||+||+|||+.+|+++..|+++|.++| +|+|+||+|+|.. +..+..+++++.|.||||++
T Consensus 156 ~P~~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~aG~lP~gv~~~v~g~~---~~~~~~~~~~~~V~FTGS~~ 232 (663)
T TIGR02278 156 FPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSLQLICGSA---GDLLDHLDHRDVVAFTGSAA 232 (663)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCcEEEEeCCh---HHHHhcCCCCCEEEEECCHH
Confidence 9999999999999999999999999999999999999999999 9999999999842 23333347789999999999
Q ss_pred HHHHHHHHHH-hcCCCceEEecCCcCcEEEccCCC-----HHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHH
Q 012658 294 TGKIVLQLAA-KSNLKPVTLELGGKSPFIVCEDAD-----VDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 367 (459)
Q Consensus 294 ~g~~i~~~~a-~~~~~pv~lelgG~~p~iV~~dAD-----ld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l 367 (459)
+|+.|++.++ ..+++|+++|||||||+||++||| +|.|++.+++++|.|+||.|++++|||||+++||+|+++|
T Consensus 233 ~G~~i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l 312 (663)
T TIGR02278 233 TADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKAL 312 (663)
T ss_pred HHHHHHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEEEeHHHHHHHHHHH
Confidence 9999998753 238899999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCC-CCcCcCCC
Q 012658 368 NALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLI-LISPASIS 446 (459)
Q Consensus 368 ~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~-~i~~~Eif 446 (459)
+++++++++|+|+++++++||++++.+++++.++|++++++|+++++||... ..|+|++|||+.+++++| .+++||+|
T Consensus 313 ~~~~~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~-~~g~~~~PTvl~~~~~~~~~i~~eE~F 391 (663)
T TIGR02278 313 QARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGR-LDGAFFPPTLLLAEDPWAGAVHATEAF 391 (663)
T ss_pred HHHHHhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcC-CCCeeEccEEEeeCCcchhhHHhcccc
Confidence 9999999999999999999999999999999999999999999999999653 358999999999999886 79999999
Q ss_pred cceEEEEecCCC
Q 012658 447 PNILHTFNGENF 458 (459)
Q Consensus 447 gPvl~v~~~~~~ 458 (459)
|||++|++|+|+
T Consensus 392 GPVl~V~~~~~~ 403 (663)
T TIGR02278 392 GPVATFFPYGDR 403 (663)
T ss_pred CCeEEEEeeCCH
Confidence 999999999985
|
This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. |
| >cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-77 Score=627.29 Aligned_cols=378 Identities=49% Similarity=0.801 Sum_probs=356.3
Q ss_pred CeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChh
Q 012658 81 KTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE 160 (459)
Q Consensus 81 ~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~ 160 (459)
.+++++||+||+++++++.++.+|++++++.|++||+.+.|++++..+|.++|+++++.|++|.++|++++++|+|||+.
T Consensus 2 ~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 81 (462)
T cd07112 2 ETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPIS 81 (462)
T ss_pred CeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH
Confidence 46899999999999999999999999999999999984459999999999999999999999999999999999999999
Q ss_pred hhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCC
Q 012658 161 QSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 240 (459)
Q Consensus 161 ~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~ 240 (459)
++...|+..+++.++|++.+++++.+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 82 ~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~ 161 (462)
T cd07112 82 DALAVDVPSAANTFRWYAEAIDKVYGEVAPTGPDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAE 161 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCCeeeeeCCC
Confidence 87656999999999999999887766544433455677899999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcE
Q 012658 241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPF 320 (459)
Q Consensus 241 ~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~ 320 (459)
.+|+++..++++|.++|+|+|++|+|+|++.+.+..|..|++++.|.||||+++|+.|++.++..++||+++|+||+||+
T Consensus 162 ~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~lelgG~n~~ 241 (462)
T cd07112 162 QSPLTALRLAELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGKSPN 241 (462)
T ss_pred CCCHHHHHHHHHHHhcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHHhcCCEEEecCCCCCeE
Confidence 99999999999999999999999999997778899999999999999999999999999988844789999999999999
Q ss_pred EEccCC-CHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHH
Q 012658 321 IVCEDA-DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKIL 399 (459)
Q Consensus 321 iV~~dA-Dld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~ 399 (459)
||++|+ |+|.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|+++++++||++++.+++++.
T Consensus 242 iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~ 321 (462)
T cd07112 242 IVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVSEAHFDKVL 321 (462)
T ss_pred EECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHH
Confidence 999999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCeEEeCCcccC--CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 400 KYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 400 ~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 322 ~~v~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~ 382 (462)
T cd07112 322 GYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSE 382 (462)
T ss_pred HHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCCH
Confidence 999999999999999996532 25899999999999999999999999999999999985
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. |
| >cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-78 Score=628.22 Aligned_cols=370 Identities=38% Similarity=0.618 Sum_probs=350.9
Q ss_pred eeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhh
Q 012658 83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162 (459)
Q Consensus 83 ~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a 162 (459)
++++||.||+++++++.++.+|++++++.|++||+ .|++++..+|.++|++++++|+++.++|++++++|+|||+.++
T Consensus 1 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a 78 (456)
T cd07145 1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKD--VMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIKQS 78 (456)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHH
Confidence 46889999999999999999999999999999999 9999999999999999999999999999999999999999998
Q ss_pred hhcchHHHHHHHHHHHHhhhhhcCcccCCCC-----CceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEee
Q 012658 163 AQTEVPMTTRLFRYYAGWADKIQGLTAPADG-----PYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLK 237 (459)
Q Consensus 163 ~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~-----~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlK 237 (459)
.. |+..+++.+++++.+++.+.+...+.+. +...+..++|+|||++|+|||||+...++++++||++||+||+|
T Consensus 79 ~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~K 157 (456)
T cd07145 79 RV-EVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVK 157 (456)
T ss_pred HH-HHHHHHHHHHHHHHHHHHhcCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEE
Confidence 64 9999999999999888766665443221 34567889999999999999999999999999999999999999
Q ss_pred cCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCc
Q 012658 238 TAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 317 (459)
Q Consensus 238 ps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~ 317 (459)
||+.+|+++..++++|.++|+|+|++|+++|++.+.+..|+.|++++.|.||||+.+|+.|++.+++ +++|+++|+|||
T Consensus 158 ps~~~p~~~~~l~~~~~~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~-~~~~v~lElgG~ 236 (456)
T cd07145 158 PSSNTPLTAIELAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGG-TGKKVALELGGS 236 (456)
T ss_pred CCccchHHHHHHHHHHHHcCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCceEEecCCC
Confidence 9999999999999999999999999999999778889999999999999999999999999999987 889999999999
Q ss_pred CcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHH
Q 012658 318 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 397 (459)
Q Consensus 318 ~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~ 397 (459)
||+||++|||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.++++
T Consensus 237 n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~ 316 (456)
T cd07145 237 DPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVER 316 (456)
T ss_pred CeeEECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCcCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 398 ILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 398 i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+.++|++++++|+++++||... .|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 317 ~~~~i~~a~~~ga~vl~gg~~~--~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~ 375 (456)
T cd07145 317 MENLVNDAVEKGGKILYGGKRD--EGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDD 375 (456)
T ss_pred HHHHHHHHHHCCCEEEeCCCCC--CCeEECCEeecCCCCCChHhhCCCCCceEEEEEECCH
Confidence 9999999999999999999653 3899999999999999999999999999999999985
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. |
| >cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-77 Score=623.89 Aligned_cols=371 Identities=44% Similarity=0.723 Sum_probs=350.8
Q ss_pred eCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhc
Q 012658 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165 (459)
Q Consensus 86 ~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ 165 (459)
+||+||+++++++.++.+|++++++.|++||+.+.|++++..+|.++|+++++.|++|.++|++++++|+|||+.++. .
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ 80 (454)
T cd07118 2 RSPAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPISQAR-G 80 (454)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-H
Confidence 589999999999999999999999999999985459999999999999999999999999999999999999999976 5
Q ss_pred chHHHHHHHHHHHHhhhhhcCcccCC-CCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchH
Q 012658 166 EVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244 (459)
Q Consensus 166 ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~ 244 (459)
|+..+++.++|++.+.+.+.+...+. ..+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus 81 ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~~p~ 160 (454)
T cd07118 81 EIEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSG 160 (454)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCCCCcH
Confidence 99999999999999877776554432 23445678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEcc
Q 012658 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324 (459)
Q Consensus 245 ~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~ 324 (459)
++..++++|.++|+|+|++|+++|++.+.+..|..|++++.|.||||+++|+.|.+.+++ +++|+++|+|||||+||++
T Consensus 161 ~~~~l~~~~~~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~n~~iV~~ 239 (454)
T cd07118 161 TTLMLAELLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAAR-NLKKVSLELGGKNPQIVFA 239 (454)
T ss_pred HHHHHHHHHHhcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCCcEEeccCCCCceEECC
Confidence 999999999999999999999999777789999999999999999999999999999887 8899999999999999999
Q ss_pred CCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 012658 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 404 (459)
Q Consensus 325 dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~ 404 (459)
|||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++
T Consensus 240 dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~p~~~~~~~gpli~~~~~~~~~~~i~~ 319 (454)
T cd07118 240 DADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYVDA 319 (454)
T ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCcCCCCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCeEEeCCcccC-CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 405 GVDGGAKLETGGERLG-AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 405 a~~~Ga~v~~gg~~~~-~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++++|+++++||.... ..|+|++|||+.+++++|.+++||+||||++|++|+|+
T Consensus 320 a~~~ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 374 (454)
T cd07118 320 GRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTV 374 (454)
T ss_pred HHhCCCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCH
Confidence 9999999999997643 36899999999999999999999999999999999985
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. |
| >PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-78 Score=634.01 Aligned_cols=380 Identities=48% Similarity=0.750 Sum_probs=359.5
Q ss_pred eeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHH
Q 012658 74 FVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETW 153 (459)
Q Consensus 74 ~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~ 153 (459)
|+.+.+ ++++++||.||++|++++.++.+|++++++.|++||+ .|+.++..+|.++|+++++.|+++.++|++++++
T Consensus 1 w~~~~~-~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~ 77 (462)
T PF00171_consen 1 WVSSES-ETFDVINPATGEVIGEVPSATAEDVDRAVEAARAAFK--EWSKLPAAERARILERFADLLEERRDELAELIAL 77 (462)
T ss_dssp EEE-TS-SEEEEEETTTECEEEEEEEBSHHHHHHHHHHHHHHHH--HHTTSSHHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CcCCCC-CEEcCCCCCCcCEEEEEcCCCHHHHHHHHHHHHHHHH--hhhhhhhhhHHHHHHHHHHHHhhccccccccccc
Confidence 777644 7899999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred HcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCe
Q 012658 154 DNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 233 (459)
Q Consensus 154 e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~ 233 (459)
|+|||+.++.. |+..+++.++||+.+++++.+...+.+.+...+..++|+|||++|+|||||+...++++++||++||+
T Consensus 78 e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~ 156 (462)
T PF00171_consen 78 ETGKPIAEARG-EVDRAIDFLRYYADAARKLAGEVLPSDPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPALAAGNT 156 (462)
T ss_dssp HHTSSHHHHHH-HHHHHHHHHHHHHHHHHHHTEEEEEESTTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHHHTT-E
T ss_pred ccccccccccc-hhhhhhhhhhhhhhcccceehhhcccccccccccccccccceeecccccccccccccchhhhhccccc
Confidence 99999999877 99999999999999999977766665678889999999999999999999999999999999999999
Q ss_pred EEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEe
Q 012658 234 IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLE 313 (459)
Q Consensus 234 VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~le 313 (459)
||+|||+.+|+++..+++++.++|+|+|++|+++|++.+.+..|..|++++.|.||||+++|+.|.+.+++ +++|+++|
T Consensus 157 VVlkps~~~~~~~~~l~~~~~~AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~-~~~~v~le 235 (462)
T PF00171_consen 157 VVLKPSEQAPLTALLLAELLEEAGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAAK-NLKPVVLE 235 (462)
T ss_dssp EEEEEBTTSHHHHHHHHHHHHHHTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHHT-TTSEEEEE
T ss_pred ceeeeccccccccccchhhccccccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhccc-cccccccc
Confidence 99999999999999999999999999999999999989999999999999999999999999999999886 88999999
Q ss_pred cCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHH
Q 012658 314 LGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSE 393 (459)
Q Consensus 314 lgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~ 393 (459)
+|||||+||++|||+|.|++.+++++|+|+||.|+++++||||+++||+|+++|+++++++++|+|.++++++||+++..
T Consensus 236 lgG~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~~gpl~~~~ 315 (462)
T PF00171_consen 236 LGGKNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIYDEFVEALKERVAKLRVGDPLDESTDVGPLISKA 315 (462)
T ss_dssp ECEEEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHTSEBSSTTSTTCSBCHCSSHH
T ss_pred ccccceeeEecccccccccccccchhcccccccccccccccccccccchhhhhhhhccccccccCCccccccccccccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCeEEeCC---cccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 394 QFEKILKYIRSGVDGGAKLETGG---ERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 394 ~~~~i~~~i~~a~~~Ga~v~~gg---~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++++.++|++++++||++++|| ......|+|++|||+.+++++|+++++|+||||++|++|+|+
T Consensus 316 ~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 383 (462)
T PF00171_consen 316 QRERVKALIEDAVAEGAKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDL 383 (462)
T ss_dssp HHHHHHHHHHHHHHTTSEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSH
T ss_pred hhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccceecccccc
Confidence 99999999999999999999999 334567899999999999999999999999999999999984
|
2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A .... |
| >PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-77 Score=626.84 Aligned_cols=384 Identities=30% Similarity=0.418 Sum_probs=357.3
Q ss_pred CccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHc
Q 012658 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (459)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~ 143 (459)
...++||||+|+.+.++++++++||.||+++++++.++.+|++++++.|++||+ .|+.++..+|.++|+++++.|+++
T Consensus 14 ~~~~~~i~G~~~~~~~~~~~~~~~P~t~~~i~~~~~a~~~dv~~av~~A~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~ 91 (496)
T PLN00412 14 DVYKYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAAQK--AWAKTPLWKRAELLHKAAAILKEH 91 (496)
T ss_pred cccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHh
Confidence 445789999999776678999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCc--cc-----CCC-CCceEEEEEccceEEEEEcCCCc
Q 012658 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL--TA-----PAD-GPYHVQTLHEPIGVAGQIIPWNF 215 (459)
Q Consensus 144 ~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~--~~-----~~~-~~~~~~~~~~P~GVv~~i~p~n~ 215 (459)
+++|++++++|+|||..++. .|+..+++.++|++..+.+..+. .. +.. .+...+..++|+|||++|+||||
T Consensus 92 ~~el~~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~ 170 (496)
T PLN00412 92 KAPIAECLVKEIAKPAKDAV-TEVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNY 170 (496)
T ss_pred HHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecceEEEEECCCCc
Confidence 99999999999999999976 59999999999999876655322 21 111 12345688999999999999999
Q ss_pred hHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHH
Q 012658 216 PLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG 295 (459)
Q Consensus 216 P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g 295 (459)
|+...++++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+++|++.+.+..|..|++|+.|.|||| .+|
T Consensus 171 P~~~~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs-~~g 249 (496)
T PLN00412 171 PVNLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTG 249 (496)
T ss_pred hHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHhCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeCh-HHH
Confidence 9999999999999999999999999999999999999999999999999999977788999999999999999999 999
Q ss_pred HHHHHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhc
Q 012658 296 KIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 375 (459)
Q Consensus 296 ~~i~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~ 375 (459)
+.|++.+ .++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus 250 ~~v~~~a---~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~ 326 (496)
T PLN00412 250 IAISKKA---GMVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLT 326 (496)
T ss_pred HHHHHHh---CCCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHHHHHHHHHHHHHHhCc
Confidence 9998876 3699999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEec
Q 012658 376 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNG 455 (459)
Q Consensus 376 vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~ 455 (459)
+|+|.+ ++++||+++..+++++.++|++++.+|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|
T Consensus 327 ~g~p~~-~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~~---~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~ 402 (496)
T PLN00412 327 VGPPED-DCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKR---EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRI 402 (496)
T ss_pred cCCCcc-cCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCeEEecEEEeCCCCCCHHHhCcCCCCeEEEEEe
Confidence 999987 789999999999999999999999999999998753 5899999999999999999999999999999999
Q ss_pred CCC
Q 012658 456 ENF 458 (459)
Q Consensus 456 ~~~ 458 (459)
+|+
T Consensus 403 ~~~ 405 (496)
T PLN00412 403 NSV 405 (496)
T ss_pred CCH
Confidence 985
|
|
| >cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-77 Score=624.09 Aligned_cols=370 Identities=49% Similarity=0.858 Sum_probs=353.5
Q ss_pred eCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhc
Q 012658 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165 (459)
Q Consensus 86 ~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ 165 (459)
+||.||+++++++.++.++++++++.|++|+. .|+.++.++|.++|+++++.|++|.++|++++++|+|||..++...
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ 79 (453)
T cd07115 2 LNPATGELIARVAQASAEDVDAAVAAARAAFE--AWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIRAARRL 79 (453)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Confidence 69999999999999999999999999999999 9999999999999999999999999999999999999999998766
Q ss_pred chHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHH
Q 012658 166 EVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245 (459)
Q Consensus 166 ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~ 245 (459)
|+..+++.+++++.++++..+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus 80 ev~~~i~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~ 159 (453)
T cd07115 80 DVPRAADTFRYYAGWADKIEGEVIPVRGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLS 159 (453)
T ss_pred HHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCCcHH
Confidence 99999999999999988876655554455667899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEccC
Q 012658 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED 325 (459)
Q Consensus 246 ~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~d 325 (459)
+..++++|.++|+|+|++++|+|++.+.+..|..|+++|.|+||||+.+|+.|++.+++ +++|+++|+|||+|+||++|
T Consensus 160 ~~~l~~~~~~aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~-~~~~~~lElgG~~p~iV~~d 238 (453)
T cd07115 160 ALRIAELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAG-NLKRVSLELGGKSANIVFAD 238 (453)
T ss_pred HHHHHHHHHhcCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCCeEEEecCCCCceEECCC
Confidence 99999999999999999999999777788999999999999999999999999999887 89999999999999999999
Q ss_pred CCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 012658 326 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 405 (459)
Q Consensus 326 ADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a 405 (459)
||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|++++.++++|+|.++++++||++++.+++++.++|+++
T Consensus 239 Adl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a 318 (453)
T cd07115 239 ADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDVG 318 (453)
T ss_pred CCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 406 VDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 406 ~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 319 ~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 371 (453)
T cd07115 319 REEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDE 371 (453)
T ss_pred HHCCCEEEeCCCCCCCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCH
Confidence 99999999999765446899999999999999999999999999999999985
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. |
| >cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-77 Score=623.89 Aligned_cols=370 Identities=45% Similarity=0.744 Sum_probs=350.1
Q ss_pred eeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhh
Q 012658 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (459)
Q Consensus 85 v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~ 164 (459)
++||.||+++++++.++.+|++++++.|++||. .|++++.++|.++|+++++.|+++.++|++++++|+|||+.++..
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 78 (456)
T cd07110 1 VINPATEATIGEIPAATAEDVDAAVRAARRAFP--RWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDEAAW 78 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence 479999999999999999999999999999999 999999999999999999999999999999999999999988764
Q ss_pred cchHHHHHHHHHHHHhhhhhcC---cccCCC-CCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCC
Q 012658 165 TEVPMTTRLFRYYAGWADKIQG---LTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 240 (459)
Q Consensus 165 ~ev~~~~~~l~~~a~~~~~~~~---~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~ 240 (459)
|+..+++.++|++..++++.. ...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 79 -ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~ 157 (456)
T cd07110 79 -DVDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSE 157 (456)
T ss_pred -HHHHHHHHHHHHHHHHHHhhccCCccccCCCCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcc
Confidence 999999999999998887642 222222 245678899999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcE
Q 012658 241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPF 320 (459)
Q Consensus 241 ~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~ 320 (459)
.+|+++..++++|.++|+|+|+||+|+|++.+.+..|..|++++.|.||||+.+|+.|++.+++ +++|+++|+|||||+
T Consensus 158 ~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~aa~-~~~~~~lElgG~~~~ 236 (456)
T cd07110 158 LTSLTELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQ-DIKPVSLELGGKSPI 236 (456)
T ss_pred cchHHHHHHHHHHHHcCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCeEEEEcCCCCee
Confidence 9999999999999999999999999999777789999999999999999999999999999887 889999999999999
Q ss_pred EEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHH
Q 012658 321 IVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 400 (459)
Q Consensus 321 iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~ 400 (459)
||++|||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|+++++++||++++.+++++.+
T Consensus 237 iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~ 316 (456)
T cd07110 237 IVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLS 316 (456)
T ss_pred EECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCeEEeCCcccC--CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 401 YIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 401 ~i~~a~~~Ga~v~~gg~~~~--~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+|++++.+||++++||.... ..|+|++|||+.+++++|.++++|+||||++|++|+|+
T Consensus 317 ~v~~a~~~Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~ 376 (456)
T cd07110 317 FIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATE 376 (456)
T ss_pred HHHHHHhCCCEEEeCCCcccccCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCCH
Confidence 99999999999999997643 46899999999999999999999999999999999985
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. |
| >cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-77 Score=623.62 Aligned_cols=369 Identities=40% Similarity=0.657 Sum_probs=349.5
Q ss_pred eeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhh
Q 012658 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (459)
Q Consensus 85 v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~ 164 (459)
++||.||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|+++.++|++++++|+|||+.++.
T Consensus 1 ~~~p~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~- 77 (456)
T cd07107 1 VINPATGQVLARVPAASAADVDRAVAAARAAFP--EWRATTPLERARMLRELATRLREHAEELALIDALDCGNPVSAML- 77 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-
Confidence 479999999999999999999999999999999 99999999999999999999999999999999999999998875
Q ss_pred cchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchH
Q 012658 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244 (459)
Q Consensus 165 ~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~ 244 (459)
.|+..+++.++|+++..+.+.+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus 78 ~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~ 157 (456)
T cd07107 78 GDVMVAAALLDYFAGLVTELKGETIPVGGRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPL 157 (456)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccccCCCCceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCChH
Confidence 69999999999999888777666555444556788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEcc
Q 012658 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324 (459)
Q Consensus 245 ~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~ 324 (459)
++..+++++.++ +|+|+||+++|++.+.+..|+.|++++.|.||||+++|+.|++.+++ +++|+++|+|||||+||++
T Consensus 158 ~~~~l~~~~~~~-lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~-~~~~~~lElgG~~p~iV~~ 235 (456)
T cd07107 158 SALRLAELAREV-LPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAE-GIKHVTLELGGKNALIVFP 235 (456)
T ss_pred HHHHHHHHHHHh-CCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-CCCeEEEECCCCCeEEECC
Confidence 999999999995 99999999999777788999999999999999999999999999887 8999999999999999999
Q ss_pred CCCHHHHHHHHHHHh-hccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHH
Q 012658 325 DADVDKAAELAHYAL-FFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 403 (459)
Q Consensus 325 dADld~aa~~i~~~~-~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~ 403 (459)
|||+|.|++.+++++ |.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.+++++.++|+
T Consensus 236 dadl~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~ 315 (456)
T cd07107 236 DADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYID 315 (456)
T ss_pred CCCHHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCcccCHHHHHHHHHHHH
Confidence 999999999999995 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCeEEeCCcccC----CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 404 SGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 404 ~a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 316 ~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~~ 374 (456)
T cd07107 316 SAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDE 374 (456)
T ss_pred HHHHCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCCH
Confidence 99999999999996532 35899999999999999999999999999999999985
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. |
| >cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-77 Score=622.68 Aligned_cols=371 Identities=38% Similarity=0.574 Sum_probs=350.9
Q ss_pred eeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCC-CCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhh
Q 012658 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP-RMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163 (459)
Q Consensus 85 v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~-~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~ 163 (459)
++||+||+++++++.++.+|++++++.|++||+ .|+ +++..+|.++|+++++.|+++.++|++++++|+|||+.++.
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~ 78 (459)
T cd07089 1 VINPATEEVIGTAPDAGAADVDAAIAAARRAFD--TGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVMTAR 78 (459)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence 479999999999999999999999999999999 899 99999999999999999999999999999999999997766
Q ss_pred hcchHHHHHHHHHHHHhhhhhcCcc-cCCC----CCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeec
Q 012658 164 QTEVPMTTRLFRYYAGWADKIQGLT-APAD----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 238 (459)
Q Consensus 164 ~~ev~~~~~~l~~~a~~~~~~~~~~-~~~~----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKp 238 (459)
..|+..+++.++|+++.+++..+.. .+.. .+...+++++|+|||++|+|||||+...++++++||++||+||+||
T Consensus 79 ~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKp 158 (459)
T cd07089 79 AMQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKP 158 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEEC
Confidence 6799999999999999888765543 2221 2456789999999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcC
Q 012658 239 AEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS 318 (459)
Q Consensus 239 s~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~ 318 (459)
|+.+|.++..++++|.++|+|+|++|+++|++.+.+..|..|++++.|.||||+.+|+.|++.+++ +++|+++|+||||
T Consensus 159 s~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~n 237 (459)
T cd07089 159 APDTPLSALLLGEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAA-TLKRVLLELGGKS 237 (459)
T ss_pred CCCChHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCCcEEEECCCCC
Confidence 999999999999999999999999999999777789999999999999999999999999999987 8899999999999
Q ss_pred cEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHH
Q 012658 319 PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 398 (459)
Q Consensus 319 p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i 398 (459)
|+||++|||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++
T Consensus 238 ~~iV~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~v 317 (459)
T cd07089 238 ANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRV 317 (459)
T ss_pred eeEECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCeEEeCCcccC--CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 399 LKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 399 ~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 318 ~~~i~~a~~~Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 379 (459)
T cd07089 318 EGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDD 379 (459)
T ss_pred HHHHHHHHHCCCEEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCCH
Confidence 9999999999999999997543 36899999999999999999999999999999999985
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. |
| >PRK11903 aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-77 Score=628.16 Aligned_cols=383 Identities=23% Similarity=0.303 Sum_probs=345.0
Q ss_pred CceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhc-cCCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 012658 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAF-DEGPWPRMTAYERSKIILRFADLLERHND 145 (459)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~-~~g~W~~~~~~~R~~iL~~~a~~l~~~~~ 145 (459)
++||||+|+.. ++.+++++||+||+++++++. +.+|+++|++.|++|+ + .|++++..+|.++|++++++|+++.+
T Consensus 6 ~~~i~G~~~~~-~~~~~~~~nP~tge~l~~v~~-~~~dv~~Av~aA~~A~~~--~W~~~~~~eR~~~L~~~a~~l~~~~~ 81 (521)
T PRK11903 6 ANYVAGRWQAG-SGAGTPLFDPVTGEELVRVSA-TGLDLAAAFAFAREQGGA--ALRALTYAQRAALLAAIVKVLQANRD 81 (521)
T ss_pred hhhCCCEEEcC-CCCeeeeECCCCCCEEEEecC-ChHHHHHHHHHHHHhhhh--hhhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 57999999965 457899999999999999996 8899999999999995 8 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCC---------CCceEEEEEcc-ceEEEEEcCCCc
Q 012658 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD---------GPYHVQTLHEP-IGVAGQIIPWNF 215 (459)
Q Consensus 146 ~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~---------~~~~~~~~~~P-~GVv~~i~p~n~ 215 (459)
+|++++++|+|||+.++. .|+..+++.++||+.+++.+.+...... .....+..++| +|||++|+||||
T Consensus 82 ela~~~~~e~Gkp~~~a~-~ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~ 160 (521)
T PRK11903 82 AYYDIATANSGTTRNDSA-VDIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNF 160 (521)
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECCcch
Confidence 999999999999999876 4999999999999998877654322111 12234567889 699999999999
Q ss_pred hHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcC-CCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHH
Q 012658 216 PLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTT 294 (459)
Q Consensus 216 P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aG-lP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~ 294 (459)
|+...++++++||++||+||+|||+.+|+++..|++++.++| +|+|++|+|+|++.+++..| ++++.|.||||+++
T Consensus 161 P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~ag~lP~gv~~~v~g~~~~~~~~l---~~v~~v~fTGS~~~ 237 (521)
T PRK11903 161 PAWGLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCGSSAGLLDHL---QPFDVVSFTGSAET 237 (521)
T ss_pred HHHHHHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHHhCCCCcCceEEeeCCchHHHhcc---cCCCEEEEECCHHH
Confidence 999999999999999999999999999999999999999999 99999999998665554444 78999999999999
Q ss_pred HHHHHHHHH-hcCCCceEEecCCcCcEEEccCCC-----HHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHH
Q 012658 295 GKIVLQLAA-KSNLKPVTLELGGKSPFIVCEDAD-----VDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKAN 368 (459)
Q Consensus 295 g~~i~~~~a-~~~~~pv~lelgG~~p~iV~~dAD-----ld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~ 368 (459)
|+.|++.++ ..+++|+++|+|||||+||++||| +|.+++.+++++|.|+||.|++++|+|||+++||+|+++|+
T Consensus 238 G~~v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~L~ 317 (521)
T PRK11903 238 AAVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAEALA 317 (521)
T ss_pred HHHHHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEEehhHHHHHHHHHH
Confidence 999998653 237899999999999999999999 59999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCccc------CCCCceEecEEEeeCCC--CCCC
Q 012658 369 ALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL------GAKGYYIKPTVFTGVKV--LILI 440 (459)
Q Consensus 369 ~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~------~~~g~~~~PTvl~~v~~--~~~i 440 (459)
++++++++|+|+++++++||++++.+++++.++|+.. .+|+++++||... ..+|+|++|||+.++++ +|.+
T Consensus 318 ~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~~-~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~~~i 396 (521)
T PRK11903 318 ARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAAL-RAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATAV 396 (521)
T ss_pred HHHHhccCCCCCCCcCccCCCCCHHHHHHHHHHHHHH-hcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCccchH
Confidence 9999999999999999999999999999999999964 6799999999642 13589999999987655 4789
Q ss_pred cCcCCCcceEEEEecCCC
Q 012658 441 SPASISPNILHTFNGENF 458 (459)
Q Consensus 441 ~~~EifgPvl~v~~~~~~ 458 (459)
++||+||||++|++|+|+
T Consensus 397 ~~eE~FGPvl~V~~~~~~ 414 (521)
T PRK11903 397 HDVEVFGPVATLLPYRDA 414 (521)
T ss_pred HhCcccCCeEEEEeeCCH
Confidence 999999999999999984
|
|
| >TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-77 Score=623.70 Aligned_cols=375 Identities=30% Similarity=0.422 Sum_probs=350.2
Q ss_pred CCccCceecCEeeeCCCCCeeeeeCCCCC-CEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHH
Q 012658 63 VDYTQLLINGQFVDSASGKTFPTLDPRTG-DVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE 141 (459)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg-~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~ 141 (459)
....++||||+|+. ++.+++++||.|+ ++|++++.++.+|+++|++.|++||. .|++++..+|.++|+++++.|+
T Consensus 35 ~~~~~~~i~g~~~~--~~~~~~~~nP~t~~e~i~~~~~~~~~dv~~av~~A~~a~~--~W~~~~~~~R~~~L~~~a~~l~ 110 (500)
T TIGR01238 35 TWQAAPIIGHSYKA--DGEAQPVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFP--TWNATPAKERAAKLDRLADLLE 110 (500)
T ss_pred ceecCceECCEEec--CCCeEEeeCCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHH
Confidence 34458999999986 5788999999995 89999999999999999999999999 9999999999999999999999
Q ss_pred HcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhH
Q 012658 142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221 (459)
Q Consensus 142 ~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 221 (459)
++.++|++++++|+|||+.++. .|+..+++.++||+...+...+. ..++|+|||++|+|||||+...+
T Consensus 111 ~~~~ela~~~~~e~Gk~~~~a~-~ev~~~i~~l~~~a~~~~~~~~~-----------~~~~P~GVV~~I~pwN~P~~~~~ 178 (500)
T TIGR01238 111 LHMPELMALCVREAGKTIHNAI-AEVREAVDFCRYYAKQVRDVLGE-----------FSVESRGVFVCISPWNFPLAIFT 178 (500)
T ss_pred hHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCc-----------eeccCcceEEEECCCchHHHHHH
Confidence 9999999999999999999876 49999999999999987654321 35899999999999999999999
Q ss_pred HHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHH
Q 012658 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (459)
Q Consensus 222 ~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 301 (459)
+++++||++||+||+|||+.+|+++..++++|.++|+|+|+||+++|.+.+.+..|..|++++.|+||||+.+|+.|++.
T Consensus 179 ~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~~~ 258 (500)
T TIGR01238 179 GQISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQT 258 (500)
T ss_pred HHHHHHHHcCCEEEEeCCCCccHHHHHHHHHHHHcCCCCCceEEEecCcchHHHHHhcCCCcCeEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998777889999999999999999999999999999
Q ss_pred HHhcCC---CceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCC
Q 012658 302 AAKSNL---KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 378 (459)
Q Consensus 302 ~a~~~~---~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~ 378 (459)
+++ ++ +|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+
T Consensus 259 aa~-~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~vG~ 337 (500)
T TIGR01238 259 LAQ-REDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVGV 337 (500)
T ss_pred Hhh-cccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceeEEcHhhHHHHHHHHHHHHHhCCCCC
Confidence 987 44 79999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCc---ccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEec
Q 012658 379 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE---RLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNG 455 (459)
Q Consensus 379 p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~---~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~ 455 (459)
|.++++++||++++.+++++.++|+++++.|++++.|+. .....|+|++|||+.+ ++|.++++|+||||++|++|
T Consensus 338 p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~~~~~~~g~f~~PTvl~~--~~~~~~~eE~FgPvl~v~~~ 415 (500)
T TIGR01238 338 PHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGTFVAPTLFEL--DDIAELSEEVFGPVLHVVRY 415 (500)
T ss_pred CCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCCCCCCCCCeeEcCEEEcc--CCchHhhCCCcCCEEEEEEe
Confidence 999999999999999999999999999999999875432 1223689999999974 78999999999999999999
Q ss_pred C
Q 012658 456 E 456 (459)
Q Consensus 456 ~ 456 (459)
+
T Consensus 416 ~ 416 (500)
T TIGR01238 416 K 416 (500)
T ss_pred C
Confidence 7
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase. |
| >cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-77 Score=619.32 Aligned_cols=367 Identities=30% Similarity=0.418 Sum_probs=345.1
Q ss_pred eeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCC-CCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhh
Q 012658 84 PTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP-WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162 (459)
Q Consensus 84 ~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~-W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a 162 (459)
+++||.||+++++++.++.+|++++++.|++||. . |+.++..+|.++|+++++.|+++.++|++++++|+|||+.++
T Consensus 2 ~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a 79 (455)
T cd07148 2 EVVNPFDLKPIGEVPTVDWAAIDKALDTAHALFL--DRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPLVDA 79 (455)
T ss_pred CccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHh--hcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 5789999999999999999999999999999998 7 567999999999999999999999999999999999999887
Q ss_pred hhcchHHHHHHHHHHHHhhhhhcCcccCCC-----CCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEee
Q 012658 163 AQTEVPMTTRLFRYYAGWADKIQGLTAPAD-----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLK 237 (459)
Q Consensus 163 ~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlK 237 (459)
. .|+..+++.++|++..+++..+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|
T Consensus 80 ~-~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlK 158 (455)
T cd07148 80 K-VEVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVK 158 (455)
T ss_pred H-HHHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEee
Confidence 6 5999999999999998887765433321 234568899999999999999999999999999999999999999
Q ss_pred cCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCc
Q 012658 238 TAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 317 (459)
Q Consensus 238 ps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~ 317 (459)
||+.+|+++..++++|.++|+|+|++|+++|+ .+.+..|+.|++||.|.||||+++|+.|++.++. .+|+++|+|||
T Consensus 159 ps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~-~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa~--~~~~~lElGG~ 235 (455)
T cd07148 159 PALATPLSCLAFVDLLHEAGLPEGWCQAVPCE-NAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAP--GTRCALEHGGA 235 (455)
T ss_pred CCCcccHHHHHHHHHHHHcCCCcCcEEEEeCC-hHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhc--CCcEEEecCCC
Confidence 99999999999999999999999999999984 4678999999999999999999999999998875 48999999999
Q ss_pred CcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHH
Q 012658 318 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 397 (459)
Q Consensus 318 ~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~ 397 (459)
||+||++|||+|.|++.|++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++++++||++++.++++
T Consensus 236 ~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~ 315 (455)
T cd07148 236 APVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDR 315 (455)
T ss_pred CceEECCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCcCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 398 ILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 398 i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+.++|++++++|+++++||... .|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 316 ~~~~i~~a~~~Ga~vl~gg~~~--~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 374 (455)
T cd07148 316 VEEWVNEAVAAGARLLCGGKRL--SDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDL 374 (455)
T ss_pred HHHHHHHHHhCCCEEEeCCccC--CCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCH
Confidence 9999999999999999999754 4789999999999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-77 Score=627.76 Aligned_cols=385 Identities=35% Similarity=0.502 Sum_probs=359.0
Q ss_pred cCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 012658 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (459)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~ 145 (459)
...+|.|.|- .++++++++||+||+++++++.++.+|++++++.|++|++ .|++++..+|.++|+++++.|+++.+
T Consensus 19 ~~~~~~~~~~--~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~ 94 (524)
T PRK09407 19 LRRLTARVDG--AAGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAAQR--AWAATPVRERAAVLLRFHDLVLENRE 94 (524)
T ss_pred HHHHHhhcCC--CCCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhHH
Confidence 4567887764 4788999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccC-C--CCCceEEEEEccceEEEEEcCCCchHHhhHH
Q 012658 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-A--DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (459)
Q Consensus 146 ~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~-~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (459)
+|++++++|+|||+.++. .|+..++..++||+..+++..+.... . ......+..++|+|||++|+|||||+...++
T Consensus 95 ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~~ 173 (524)
T PRK09407 95 ELLDLVQLETGKARRHAF-EEVLDVALTARYYARRAPKLLAPRRRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVS 173 (524)
T ss_pred HHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCccccccCCCCceEEEEEecceEEEEEeCCCChHHHHHH
Confidence 999999999999998875 59999999999999988776543221 1 1234678899999999999999999999999
Q ss_pred HHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHH
Q 012658 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (459)
Q Consensus 223 ~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~ 302 (459)
++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+|+|++.+.+..|.+| ++.|.||||+++|+.|++.+
T Consensus 174 ~~~~ALaaGN~VIlKPs~~tp~~~~~l~~ll~eaGlP~gvv~~v~g~~~~~~~~L~~~--~d~V~fTGs~~~g~~v~~~a 251 (524)
T PRK09407 174 DAIPALLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQA 251 (524)
T ss_pred HHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCcccEEEEecCCchHHHHHHhc--CCEEEEECCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999877888999976 78999999999999999998
Q ss_pred HhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCC
Q 012658 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 382 (459)
Q Consensus 303 a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~ 382 (459)
++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++
T Consensus 252 a~-~~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~ 330 (524)
T PRK09407 252 GR-RLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAGYDY 330 (524)
T ss_pred Hh-cCCcEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCc
Confidence 87 88999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccC-CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 383 ~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++++||++++.+++++.++|++++++||++++||.... ..|+|++|||+.+++++|.+++||+||||++|++|+|+
T Consensus 331 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~ 407 (524)
T PRK09407 331 SADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADV 407 (524)
T ss_pred CCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCCH
Confidence 99999999999999999999999999999999996432 25799999999999999999999999999999999985
|
|
| >cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-77 Score=620.40 Aligned_cols=369 Identities=38% Similarity=0.612 Sum_probs=351.9
Q ss_pred eeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhh
Q 012658 83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162 (459)
Q Consensus 83 ~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a 162 (459)
++++||+||+++++++.++.+|++++++.|++|++ .|+.++..+|.++|+++++.|+++.++|++++++|+|||+.++
T Consensus 1 ~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a 78 (451)
T cd07150 1 FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAFP--AWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTYGKA 78 (451)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHH
Confidence 46889999999999999999999999999999999 9999999999999999999999999999999999999999887
Q ss_pred hhcchHHHHHHHHHHHHhhhhhcCcccCCC-CCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCC
Q 012658 163 AQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241 (459)
Q Consensus 163 ~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~ 241 (459)
. .|+..+++.+++++.++++..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 79 ~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~ 157 (451)
T cd07150 79 W-FETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEE 157 (451)
T ss_pred H-HHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECCcc
Confidence 5 4999999999999999888766555433 3556788999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEE
Q 012658 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321 (459)
Q Consensus 242 ~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~i 321 (459)
+|.++..++++|.++|+|+|++|+++|++.+.+..|..|++++.|.||||+.+|+.|++.+++ +++|+++|+|||||+|
T Consensus 158 ~p~t~~~l~~~~~~ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~-~~~~~~lelGG~~~~i 236 (451)
T cd07150 158 TPVIGLKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGR-HLKKITLELGGKNPLI 236 (451)
T ss_pred CcHHHHHHHHHHHHhCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCCceEeecCCCCeeE
Confidence 999999999999999999999999999777889999999999999999999999999999887 8899999999999999
Q ss_pred EccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHH
Q 012658 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 401 (459)
Q Consensus 322 V~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~ 401 (459)
|++|||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++
T Consensus 237 V~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~ 316 (451)
T cd07150 237 VLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQ 316 (451)
T ss_pred ECCCCChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 402 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 402 i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
|++++.+|+++++||.. +|+|++|||+.++++||.+++||+||||++|++|+|+
T Consensus 317 i~~a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 370 (451)
T cd07150 317 VEDAVAKGAKLLTGGKY---DGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDA 370 (451)
T ss_pred HHHHHhCCCEEEeCCcc---CCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCH
Confidence 99999999999999864 4899999999999999999999999999999999985
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. |
| >PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-77 Score=644.62 Aligned_cols=386 Identities=24% Similarity=0.311 Sum_probs=347.2
Q ss_pred CCccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHh-ccCCCCCCCCHHHHHHHHHHHHHHHH
Q 012658 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKA-FDEGPWPRMTAYERSKIILRFADLLE 141 (459)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A-~~~g~W~~~~~~~R~~iL~~~a~~l~ 141 (459)
+.+.++||||+|+.+ ++++++++||.||+++++++.++ +|+++|++.|++| ++ .|++++..+|.++|++++++|+
T Consensus 2 ~~~~~~~i~G~~~~~-~~~~~~~~nP~tg~~i~~~~~~~-~dv~~Av~~A~~A~~~--~W~~~~~~eR~~~L~~~a~~l~ 77 (675)
T PRK11563 2 MQKLQSYVAGRWQTG-QGEGRPLHDAVTGEPVARVSSEG-LDFAAALAYAREVGGP--ALRALTFHERAAMLKALAKYLL 77 (675)
T ss_pred CccccceecCEEEcC-CCCceeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhhhh--hhhcCCHHHHHHHHHHHHHHHH
Confidence 344579999999976 56789999999999999999987 6999999999998 68 9999999999999999999999
Q ss_pred HcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhc--------CcccCCC--CCceEEEEEccc-eEEEEE
Q 012658 142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ--------GLTAPAD--GPYHVQTLHEPI-GVAGQI 210 (459)
Q Consensus 142 ~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~--------~~~~~~~--~~~~~~~~~~P~-GVv~~i 210 (459)
+|.++|++ +++|+|||+.++.. |+..+++.++||+.++++.. +...+.. .....+..++|+ |||++|
T Consensus 78 ~~~~ela~-l~~e~GK~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~GVv~~I 155 (675)
T PRK11563 78 ERKEELYA-LSAQTGATRRDSWI-DIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLSKGGTFAGRHILTPLEGVAVHI 155 (675)
T ss_pred HhHHHHHH-HHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHhhhccccccccCCccccccCCCcccceEEEeecCceEEEE
Confidence 99999998 58999999998764 99999999999999886542 3333321 112256788997 999999
Q ss_pred cCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcC-CCCCcEEeecCCChhHHHHHHcCCCccEEEee
Q 012658 211 IPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHMEVDKLAFT 289 (459)
Q Consensus 211 ~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aG-lP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ft 289 (459)
+|||||+...++++++||++||+||+|||+.+|+++..|++++.++| +|+|++|+|+|++ +..+..++.+++|.||
T Consensus 156 ~PwNfP~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~eaG~~P~gv~~vv~g~~---~~~~~~~~~i~~v~FT 232 (675)
T PRK11563 156 NAFNFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLICGSA---GDLLDHLDGQDVVTFT 232 (675)
T ss_pred CCCchHHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHcCCCCCCcEEEeeCCH---HHHhhcCCCCCEEEEE
Confidence 99999999999999999999999999999999999999999999999 9999999999853 2334444679999999
Q ss_pred CChHHHHHHHHHHH-hcCCCceEEecCCcCcEEEccCCC-----HHHHHHHHHHHhhccCCCccccCceeEeeCcchHHH
Q 012658 290 GSTTTGKIVLQLAA-KSNLKPVTLELGGKSPFIVCEDAD-----VDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 363 (459)
Q Consensus 290 Gs~~~g~~i~~~~a-~~~~~pv~lelgG~~p~iV~~dAD-----ld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f 363 (459)
||+++|+.|++.++ ..+++|+++|||||||+||++||| +|.|++.+++++|.|+||.|++++|+|||+++||+|
T Consensus 233 GS~~~G~~i~~~~~a~~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f 312 (675)
T PRK11563 233 GSAATAQKLRAHPNVVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAV 312 (675)
T ss_pred CcHHHHHHHHhhhhhhhCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEEeeHHHHHHH
Confidence 99999999998632 238999999999999999999995 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCccc-------CCCCceEecEEEeeCCC
Q 012658 364 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL-------GAKGYYIKPTVFTGVKV 436 (459)
Q Consensus 364 ~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~-------~~~g~~~~PTvl~~v~~ 436 (459)
+++|+++++++++|+|+++++++||++++.+++++.++|++++++ |++++||... ...|+|++|||+.++++
T Consensus 313 ~~~l~~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~-a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~ 391 (675)
T PRK11563 313 IEALRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDP 391 (675)
T ss_pred HHHHHHHHhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhC-CEEEECCcccccccCCCCCCCeeECCEEEeccCc
Confidence 999999999999999999999999999999999999999999999 9999999531 13589999999999998
Q ss_pred --CCCCcCcCCCcceEEEEecCCC
Q 012658 437 --LILISPASISPNILHTFNGENF 458 (459)
Q Consensus 437 --~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+|.+++||+||||++|++|+|+
T Consensus 392 ~~~~~i~~eEiFGPVl~V~~~~~~ 415 (675)
T PRK11563 392 LEAPAVHDVEAFGPVSTLMPYDDL 415 (675)
T ss_pred hhhhhHhhccccCCceEEEecCCH
Confidence 5799999999999999999985
|
|
| >cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-76 Score=625.78 Aligned_cols=384 Identities=32% Similarity=0.450 Sum_probs=358.9
Q ss_pred CceecCEeeeCCCCCeeeeeCCCC-CCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 012658 67 QLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (459)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~ 145 (459)
-.||+|+|+. ++++++++||.| |+++++++.++.+|++++++.|++|++ .|+.++.++|.++|+++++.|+++.+
T Consensus 34 ~p~i~g~~~~--~~~~~~v~~P~t~g~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 109 (518)
T cd07125 34 IPIINGEETE--TGEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAFA--GWSATPVEERAEILEKAADLLEANRG 109 (518)
T ss_pred CceECCEEee--CCCeEEEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 4689999973 688999999999 999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCc-ccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHH
Q 012658 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL-TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (459)
Q Consensus 146 ~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~-~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 224 (459)
+|++++++|+|||+.++. .|+..+++.+++++..+++..+. ..+...+...+..++|+|||++|+|||||+...++++
T Consensus 110 ~la~~~~~e~Gk~~~~a~-~ev~~~i~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~GVV~~I~p~N~P~~~~~~~i 188 (518)
T cd07125 110 ELIALAAAEAGKTLADAD-AEVREAIDFCRYYAAQARELFSDPELPGPTGELNGLELHGRGVFVCISPWNFPLAIFTGQI 188 (518)
T ss_pred HHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccCCCCceeEEEEecccEEEEECCcchHHHHHHHHH
Confidence 999999999999999886 59999999999999988876543 3344445667889999999999999999999999999
Q ss_pred HHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHh
Q 012658 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304 (459)
Q Consensus 225 ~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~ 304 (459)
++||++||+||+|||+.+|+++..++++|.++|+|+|+||+++|++.+.+..|..|+++|.|.||||+++|+.|++.+++
T Consensus 189 ~~ALaaGN~VVlKps~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~ 268 (518)
T cd07125 189 AAALAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAE 268 (518)
T ss_pred HHHHHcCCEEEEeCCCcCcHHHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECCHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999776788999999999999999999999999998875
Q ss_pred c--CCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCC
Q 012658 305 S--NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 382 (459)
Q Consensus 305 ~--~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~ 382 (459)
+ .++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|++++.++++|+|.++
T Consensus 269 ~~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~ 348 (518)
T cd07125 269 RDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKVGDPWDL 348 (518)
T ss_pred ccCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcchhHHHHHHHHHHHHhcCCccCCCCC
Confidence 3 37999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecC--CC
Q 012658 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGE--NF 458 (459)
Q Consensus 383 ~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~--~~ 458 (459)
++++||++++.+++++.++|+++++ ++++++||......|+|++|||+.++ +|.+++||+||||++|++|+ |+
T Consensus 349 ~~~~gpli~~~~~~~v~~~i~~a~~-~~~vl~gg~~~~~~g~~~~Ptvl~~v--~~~i~~eE~FgPVl~v~~~~~~~~ 423 (518)
T cd07125 349 STDVGPLIDKPAGKLLRAHTELMRG-EAWLIAPAPLDDGNGYFVAPGIIEIV--GIFDLTTEVFGPILHVIRFKAEDL 423 (518)
T ss_pred CCCcCCCcCHHHHHHHHHHHHHHHh-CCEEEeCCCcCCCCCeEEccEEEeec--CChHhhCcccCCeEEEEEeCCCCH
Confidence 9999999999999999999999987 46899998653336899999999988 99999999999999999999 64
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. |
| >cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-76 Score=619.25 Aligned_cols=369 Identities=43% Similarity=0.705 Sum_probs=349.6
Q ss_pred eeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCC-CCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhh
Q 012658 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP-RMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163 (459)
Q Consensus 85 v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~-~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~ 163 (459)
++||+||+++++++.++.+|++++++.|++|+. .|. +++.++|.++|+++++.|++|.++|++++++|+|||+.++.
T Consensus 1 ~~~P~tg~~i~~~~~~~~~dv~~av~~a~~A~~--~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~ 78 (454)
T cd07109 1 VFDPSTGEVFARIARGGAADVDRAVQAARRAFE--SGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLTQAR 78 (454)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH
Confidence 479999999999999999999999999999999 876 99999999999999999999999999999999999999876
Q ss_pred hcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCch
Q 012658 164 QTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243 (459)
Q Consensus 164 ~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p 243 (459)
.|+..+++.++||+++.+++.+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 79 -~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p 157 (454)
T cd07109 79 -ADVEAAARYFEYYGGAADKLHGETIPLGPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAP 157 (454)
T ss_pred -HHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCh
Confidence 5999999999999998888776555544456788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEc
Q 012658 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 323 (459)
Q Consensus 244 ~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~ 323 (459)
+++..++++|.++|+|+|++|+++|.+.+.+..|+.|++++.|.||||+.+|+.|++.+++ +++|+++|+|||||+||+
T Consensus 158 ~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~-~~~p~~lElgG~~~~iV~ 236 (454)
T cd07109 158 LTALRLAELAEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAE-NVVPVTLELGGKSPQIVF 236 (454)
T ss_pred HHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCcEEEECCCCCceEEC
Confidence 9999999999999999999999999777889999999999999999999999999999887 889999999999999999
Q ss_pred cCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHH
Q 012658 324 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 403 (459)
Q Consensus 324 ~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~ 403 (459)
+|||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.+ .+++||++++++++++.++|+
T Consensus 237 ~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~-~~~~gpli~~~~~~~~~~~i~ 315 (454)
T cd07109 237 ADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLE-DPDLGPLISAKQLDRVEGFVA 315 (454)
T ss_pred CCCCHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCcc-cCcCCCccCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999986 689999999999999999999
Q ss_pred HHHhCCCeEEeCCcccC---CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 404 SGVDGGAKLETGGERLG---AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 404 ~a~~~Ga~v~~gg~~~~---~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 316 ~a~~~ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~ 373 (454)
T cd07109 316 RARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDE 373 (454)
T ss_pred HHHhCCCEEEeCCCcCcccCCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCH
Confidence 99999999999986532 36899999999999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. |
| >cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-77 Score=620.13 Aligned_cols=369 Identities=42% Similarity=0.693 Sum_probs=350.3
Q ss_pred eeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhh
Q 012658 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (459)
Q Consensus 85 v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~ 164 (459)
++||.||+++++++.++.+|++++++.|++|+. .|++++..+|.++|+++++.|+++.++|++++++|+|||+.++.
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~- 77 (457)
T cd07090 1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQK--EWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPIEEAR- 77 (457)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-
Confidence 479999999999999999999999999999999 99999999999999999999999999999999999999998875
Q ss_pred cchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchH
Q 012658 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244 (459)
Q Consensus 165 ~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~ 244 (459)
.|+..+++.++||+++.+.+.+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus 78 ~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~~~ 157 (457)
T cd07090 78 VDIDSSADCLEYYAGLAPTLSGEHVPLPGGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPL 157 (457)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCeeeccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCCCcCcH
Confidence 59999999999999998887665554444667788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEcc
Q 012658 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324 (459)
Q Consensus 245 ~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~ 324 (459)
++..+.++|.++|+|+|++|+++|++ +.+..|..|++++.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++
T Consensus 158 ~~~~l~~~~~~aGlP~g~~~~v~g~~-~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~~~~~~lelgG~~p~iV~~ 235 (457)
T cd07090 158 TALLLAEILTEAGLPDGVFNVVQGGG-ETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAK-GIKHVTLELGGKSPLIIFD 235 (457)
T ss_pred HHHHHHHHHHHcCCCcccEEEEeCCh-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-cCCceEEecCCCCceEECC
Confidence 99999999999999999999999854 588999999999999999999999999999887 8999999999999999999
Q ss_pred CCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 012658 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 404 (459)
Q Consensus 325 dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~ 404 (459)
|||+|.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++.+++|+|+++++++||++++.+++++.++|++
T Consensus 236 dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~ 315 (457)
T cd07090 236 DADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIES 315 (457)
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCeEEeCCcccC-----CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 405 GVDGGAKLETGGERLG-----AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 405 a~~~Ga~v~~gg~~~~-----~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++++|+++++||.... ..|+|++|||+.+++++|+++++|+||||++|++|+|+
T Consensus 316 a~~~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~ 374 (457)
T cd07090 316 AKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTE 374 (457)
T ss_pred HHHCCCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCH
Confidence 9999999999997532 35899999999999999999999999999999999985
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. |
| >cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-76 Score=618.82 Aligned_cols=384 Identities=34% Similarity=0.477 Sum_probs=362.3
Q ss_pred cCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCC-CHHHHHHHHHHHHHHHHHcH
Q 012658 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRM-TAYERSKIILRFADLLERHN 144 (459)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~-~~~~R~~iL~~~a~~l~~~~ 144 (459)
.++||||+|+.+. +++++++||+||+++++++.++.+|++++++.|++|++ .|+++ +..+|.++|+++++.|+++.
T Consensus 2 ~~~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~~R~~~L~~~a~~l~~~~ 78 (473)
T cd07082 2 FKYLINGEWKESS-GKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGR--GWWPTMPLEERIDCLHKFADLLKENK 78 (473)
T ss_pred CCceECCEEecCC-CCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhcCCHHHHHHHHHHHHHHHHHHH
Confidence 3679999999764 78999999999999999999999999999999999999 99988 99999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCC-----CCceEEEEEccceEEEEEcCCCchHHh
Q 012658 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-----GPYHVQTLHEPIGVAGQIIPWNFPLLM 219 (459)
Q Consensus 145 ~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-----~~~~~~~~~~P~GVv~~i~p~n~P~~~ 219 (459)
++|++++++|+|||+.++. .|+..+++.++++++..+++.+...+.+ .+...+..++|+|||++|+|||||+..
T Consensus 79 ~el~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~ 157 (473)
T cd07082 79 EEVANLLMWEIGKTLKDAL-KEVDRTIDYIRDTIEELKRLDGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNL 157 (473)
T ss_pred HHHHHHHHHHcCCcHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccccccccCCCceeEEEEecceEEEEECCcCcHHHH
Confidence 9999999999999999876 4999999999999998887765544322 345668899999999999999999999
Q ss_pred hHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHH
Q 012658 220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299 (459)
Q Consensus 220 ~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 299 (459)
.++++++||++||+||+|||+.+|.++..|.++|.++|+|+|+++++++.+.+.+..|..|+++|.|.||||+++|+.|.
T Consensus 158 ~~~~i~~AL~aGN~vilKps~~~~~~~~~l~~~l~~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~ 237 (473)
T cd07082 158 TVSKLIPALIMGNTVVFKPATQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLK 237 (473)
T ss_pred HHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998777899999999999999999999999999
Q ss_pred HHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCC
Q 012658 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379 (459)
Q Consensus 300 ~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p 379 (459)
+.++ ++|+++|+||+||+||++|||+|.|++.+++++|.++||.|+++++||||++++|+|+++|.++++++++|+|
T Consensus 238 ~~a~---~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~~ 314 (473)
T cd07082 238 KQHP---MKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVGMP 314 (473)
T ss_pred HHhC---CCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHHHHHHHHHHHHHhcCCCCCC
Confidence 8865 6999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 380 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 380 ~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
.++++++||++++.+++++.+++++++++|+++++||... .|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 315 ~~~~~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~~--~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~ 391 (473)
T cd07082 315 WDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGRE--GGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDI 391 (473)
T ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC--CCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCCH
Confidence 9999999999999999999999999999999999999753 3899999999999999999999999999999999985
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. |
| >cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-76 Score=615.33 Aligned_cols=372 Identities=46% Similarity=0.753 Sum_probs=351.3
Q ss_pred eeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhh
Q 012658 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (459)
Q Consensus 85 v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~ 164 (459)
++||+||++|++++.++.+|++++++.|++|+..+.|+.++..+|.++|++++++|.+++++|++++++|+|||+.++.
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~- 79 (457)
T cd07114 1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLIRETR- 79 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH-
Confidence 4799999999999999999999999999999974459999999999999999999999999999999999999999876
Q ss_pred cchHHHHHHHHHHHHhhhhhcCcccCCC-CCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCch
Q 012658 165 TEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243 (459)
Q Consensus 165 ~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p 243 (459)
.|+..+++.+++++.+.+++.+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 80 ~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~~~p 159 (457)
T cd07114 80 AQVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTP 159 (457)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCccch
Confidence 4999999999999998887765544433 355678899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEc
Q 012658 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 323 (459)
Q Consensus 244 ~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~ 323 (459)
+++..|+++|.++|+|+|+||+++|++.+.+..|..|++++.|+||||+.+|+.|++.+++ +++|+++|+|||||+||+
T Consensus 160 ~~~~~l~~~l~~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~ 238 (457)
T cd07114 160 ASTLELAKLAEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAE-NLAPVTLELGGKSPNIVF 238 (457)
T ss_pred HHHHHHHHHHHHcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeEEEecCCCCeeEEC
Confidence 9999999999999999999999999777789999999999999999999999999999887 889999999999999999
Q ss_pred cCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHH
Q 012658 324 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 403 (459)
Q Consensus 324 ~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~ 403 (459)
+|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|+
T Consensus 239 ~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~ 318 (457)
T cd07114 239 DDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKVERYVA 318 (457)
T ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCeEEeCCcccC----CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 404 SGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 404 ~a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++++|+++++||.... ..|+|++|||+.+++++|.+++||+||||++|++|+|+
T Consensus 319 ~a~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 377 (457)
T cd07114 319 RAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDE 377 (457)
T ss_pred HHHHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCCH
Confidence 99999999999997542 35899999999999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. |
| >cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-76 Score=614.60 Aligned_cols=366 Identities=35% Similarity=0.520 Sum_probs=344.4
Q ss_pred CCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcc
Q 012658 87 DPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTE 166 (459)
Q Consensus 87 ~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~e 166 (459)
||.||+++++++.++.+|++++++.|++||. .|++++..+|.++|+++++.|++|.++|++++++|+|||+.++. .|
T Consensus 2 ~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~-~e 78 (454)
T cd07101 2 APFTGEPLGELPQSTPADVEAAFARARAAQR--AWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARRHAF-EE 78 (454)
T ss_pred cCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHH-HH
Confidence 8999999999999999999999999999999 99999999999999999999999999999999999999998875 59
Q ss_pred hHHHHHHHHHHHHhhhhhcCccc-CC--CCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCch
Q 012658 167 VPMTTRLFRYYAGWADKIQGLTA-PA--DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243 (459)
Q Consensus 167 v~~~~~~l~~~a~~~~~~~~~~~-~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p 243 (459)
+..+++.++|++..+++...... +. ......+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 79 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p 158 (454)
T cd07101 79 VLDVAIVARYYARRAERLLKPRRRRGAIPVLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTA 158 (454)
T ss_pred HHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccch
Confidence 99999999999998877654322 11 1234678899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEc
Q 012658 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 323 (459)
Q Consensus 244 ~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~ 323 (459)
+++..+++++.++|+|+|++|+++|++.+.+..|.+| ++.|.||||+++|+.|++.+++ +++|+++|+|||||+||+
T Consensus 159 ~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~--~~~V~fTGs~~~g~~i~~~aa~-~~~~~~lElgG~~p~iV~ 235 (454)
T cd07101 159 LTALWAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTATGRVVAERAGR-RLIGCSLELGGKNPMIVL 235 (454)
T ss_pred HHHHHHHHHHHHcCcCCCcEEEEeCCcHHHHHHHHhC--CCEEEEECCHHHHHHHHHHHHh-cCCcEEEECCCCceEEEC
Confidence 9999999999999999999999999888889999987 5889999999999999999887 889999999999999999
Q ss_pred cCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHH
Q 012658 324 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 403 (459)
Q Consensus 324 ~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~ 403 (459)
+|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.+++++.++|+
T Consensus 236 ~dAdl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~v~ 315 (454)
T cd07101 236 EDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVD 315 (454)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCeEEeCCcccC-CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 404 SGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 404 ~a~~~Ga~v~~gg~~~~-~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++++|+++++||.... ..|+|++|||+.+++++|.+++||+||||++|++|+|+
T Consensus 316 ~a~~~Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~ 371 (454)
T cd07101 316 DAVAKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADD 371 (454)
T ss_pred HHHHCCCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCH
Confidence 99999999999986432 25799999999999999999999999999999999985
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). |
| >PLN02174 aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-76 Score=612.65 Aligned_cols=350 Identities=26% Similarity=0.357 Sum_probs=325.3
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHH
Q 012658 100 GEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179 (459)
Q Consensus 100 ~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~ 179 (459)
-...|++++++.|++||+ .|++++..+|.++|+++++.|++|.++|+++++.|+|||+.++...|+..+++.++|+++
T Consensus 7 ~~~~~v~~av~~a~~af~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~~~~ 84 (484)
T PLN02174 7 FGAADASILVTELRRSFD--DGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALK 84 (484)
T ss_pred cCHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 457899999999999999 999999999999999999999999999999999999999988876799999999999999
Q ss_pred hhhhhcC----cccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHH
Q 012658 180 WADKIQG----LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHE 255 (459)
Q Consensus 180 ~~~~~~~----~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~ 255 (459)
.+++..+ ...+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~l~~~ 164 (484)
T PLN02174 85 QLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQ 164 (484)
T ss_pred HHHHHhcccccccccccCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHH
Confidence 8887654 222222244578899999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHH
Q 012658 256 AGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELA 335 (459)
Q Consensus 256 aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i 335 (459)
++|+|+||+|+| +.+.+..|.. +++|+|.||||+.+|+.|++.+++ +++|+++|||||||+||++|||+|.|++.+
T Consensus 165 -~lp~gvv~vv~G-~~~~~~~l~~-~~vd~V~FTGS~~~G~~I~~~aa~-~l~~v~LELGGk~p~iV~~dADl~~Aa~~i 240 (484)
T PLN02174 165 -YLDSSAVRVVEG-AVTETTALLE-QKWDKIFYTGSSKIGRVIMAAAAK-HLTPVVLELGGKSPVVVDSDTDLKVTVRRI 240 (484)
T ss_pred -hCCCCEEEEEEC-ChHHHHHHhc-ccCCEEEEECChHHHHHHHHHHHh-cCCcEEEecCCCCeEEEcCCCCHHHHHHHH
Confidence 699999999998 4445677776 899999999999999999999987 899999999999999999999999999999
Q ss_pred HHHhh-ccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEe
Q 012658 336 HYALF-FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLET 414 (459)
Q Consensus 336 ~~~~~-~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~ 414 (459)
++++| .|+||.|++++|+|||+++||+|+++|+++++++++|+|.+ ++++||++++.+++++.++|+++ ++|+++++
T Consensus 241 ~~g~f~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~-~~~~Gpli~~~~~~~v~~~i~~a-~~ga~~~~ 318 (484)
T PLN02174 241 IAGKWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPME-SKDMSRIVNSTHFDRLSKLLDEK-EVSDKIVY 318 (484)
T ss_pred HHHHhhCCCCCCCCcCcEEEEeHHHHHHHHHHHHHHHHhhcCCCCcc-cCCcCCCCCHHHHHHHHHHHHHH-HcCCEEEE
Confidence 99999 69999999999999999999999999999999999999987 78999999999999999999998 88999999
Q ss_pred CCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 415 GGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 415 gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
||... ..|+|++|||+.++++||++++||+||||++|++|+|+
T Consensus 319 GG~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 361 (484)
T PLN02174 319 GGEKD-RENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNL 361 (484)
T ss_pred CCCcC-CCCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCH
Confidence 99653 36899999999999999999999999999999999985
|
|
| >cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-76 Score=612.97 Aligned_cols=366 Identities=40% Similarity=0.630 Sum_probs=344.9
Q ss_pred eeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhh
Q 012658 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (459)
Q Consensus 85 v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~ 164 (459)
++||+||+++++++.++.+|++++++.|++||. .|++++..+|.++|+++++.|++|.++|++++++|+|||..++..
T Consensus 1 ~~~P~tg~~~~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 78 (446)
T cd07106 1 VINPATGEVFASAPVASEAQLDQAVAAAKAAFP--GWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLAEAQF 78 (446)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence 479999999999999999999999999999999 999999999999999999999999999999999999999988764
Q ss_pred cchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchH
Q 012658 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244 (459)
Q Consensus 165 ~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~ 244 (459)
|+..+++.+++++.... .+...+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus 79 -ev~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~ 155 (446)
T cd07106 79 -EVGGAVAWLRYTASLDL--PDEVIEDDDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPL 155 (446)
T ss_pred -HHHHHHHHHHHHHhhhh--cCccccCCCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCccchH
Confidence 99999999999988763 233333233556789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEcc
Q 012658 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324 (459)
Q Consensus 245 ~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~ 324 (459)
++..++++|.++ +|+|++|+++| +.+.+..|.+|+++|.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++
T Consensus 156 ~~~~l~~~~~~~-lP~g~~~~v~g-~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~-~~~~~~lElGG~~p~iV~~ 232 (446)
T cd07106 156 CTLKLGELAQEV-LPPGVLNVVSG-GDELGPALTSHPDIRKISFTGSTATGKKVMASAAK-TLKRVTLELGGNDAAIVLP 232 (446)
T ss_pred HHHHHHHHHHHh-CCcCeEEEeeC-ChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeeEEecCCCCeeEECC
Confidence 999999999995 99999999998 45688999999999999999999999999999887 8999999999999999999
Q ss_pred CCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 012658 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 404 (459)
Q Consensus 325 dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~ 404 (459)
|||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++
T Consensus 233 dADl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~i~~ 312 (446)
T cd07106 233 DVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVED 312 (446)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCCCCCcEEEEccccHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 405 GVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 405 a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++.+|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 313 a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~ 366 (446)
T cd07106 313 AKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDE 366 (446)
T ss_pred HHHCCCEEEeCCCcCCCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCH
Confidence 999999999999765456899999999999999999999999999999999985
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. |
| >cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-75 Score=607.50 Aligned_cols=374 Identities=24% Similarity=0.282 Sum_probs=339.2
Q ss_pred ceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCC--CCCCHHHH----HHHHHHHHHHHH
Q 012658 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPW--PRMTAYER----SKIILRFADLLE 141 (459)
Q Consensus 68 ~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W--~~~~~~~R----~~iL~~~a~~l~ 141 (459)
+||||+|+.+ +++++++||.||+++++++.++.+|+++|++.|++||+ .| ..++..+| .++|.++++.|+
T Consensus 1 ~~i~g~~~~~--~~~~~~~nP~t~~~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~~~R~l~~~~il~~~a~~l~ 76 (489)
T cd07126 1 NLVAGKWKGA--SNYTTLLDPLNGDKFISVPDTDEDEINEFVDSLRQCPK--SGLHNPLKNPERYLLYGDVSHRVAHELR 76 (489)
T ss_pred CcCCCEEecC--CCcEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hccccCCCHHHHhhhHHHHHHHHHHHHH
Confidence 4799999874 57899999999999999999999999999999999999 77 66789999 899999999999
Q ss_pred Hc--HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCccc--CC-CCCceEEEEEccceEEEEEcCCCch
Q 012658 142 RH--NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA--PA-DGPYHVQTLHEPIGVAGQIIPWNFP 216 (459)
Q Consensus 142 ~~--~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~--~~-~~~~~~~~~~~P~GVv~~i~p~n~P 216 (459)
++ .++|++++++|+|||+.++. .|+..+++.++||++..++..+... +. ..+...+++++|+|||++|+|||||
T Consensus 77 ~~~~~~~la~~~~~e~GK~~~~a~-~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~v~r~P~GVV~~I~PwNfP 155 (489)
T cd07126 77 KPEVEDFFARLIQRVAPKSDAQAL-GEVVVTRKFLENFAGDQVRFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFP 155 (489)
T ss_pred cCCCHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCceeccCCCCCCceeEEEEecceEEEEECCCchH
Confidence 98 49999999999999998875 5999999999999998877655442 22 1245678999999999999999999
Q ss_pred HHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHH
Q 012658 217 LLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGK 296 (459)
Q Consensus 217 ~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~ 296 (459)
+.+.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.+ +..+..|+++++|.||||+++|+
T Consensus 156 ~~l~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~aGlP~gv~~vv~G~~~~-~~~l~~~~~v~~V~FTGS~~vGr 234 (489)
T cd07126 156 LEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPT-MNKILLEANPRMTLFTGSSKVAE 234 (489)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCcCcCcEEEEeCCchh-HHHHhcCCCCCEEEEECCHHHHH
Confidence 99999999999999999999999999999999999999999999999999996655 45688899999999999999999
Q ss_pred HHHHHHHhcCCCceEEecCCcCcEEEccCC-CHHHHHHHHHHHhhccCCCccccCceeEeeCcc-hHHHHHHHHHHHHhh
Q 012658 297 IVLQLAAKSNLKPVTLELGGKSPFIVCEDA-DVDKAAELAHYALFFNQGQCCCAGSRTFVHESV-YDQFVEKANALAMKR 374 (459)
Q Consensus 297 ~i~~~~a~~~~~pv~lelgG~~p~iV~~dA-Dld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v-~d~f~~~l~~~~~~~ 374 (459)
.|...++ +++.+|+||+||+||++|| |+|.|++.+++++|.|+||.|++++|+|||+++ +|+|+++|++.++++
T Consensus 235 ~i~~~~g----~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~ 310 (489)
T cd07126 235 RLALELH----GKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKALAEQR 310 (489)
T ss_pred HHHHHhC----CCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchHHHHHHHHHHHHHhc
Confidence 9987765 4799999999999999999 999999999999999999999999999999995 689999999999999
Q ss_pred ccCCCCCCCCcccccCCHHHHHHHHHHHHHHHh-CCCeEEeCCcccCC----CC-ceEecEEEee------CCCCCCCcC
Q 012658 375 VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD-GGAKLETGGERLGA----KG-YYIKPTVFTG------VKVLILISP 442 (459)
Q Consensus 375 ~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~-~Ga~v~~gg~~~~~----~g-~~~~PTvl~~------v~~~~~i~~ 442 (459)
++|+ +++||+++.. .+++.++|+++++ +||++++||..... .| .|++|||+.. ++++|++++
T Consensus 311 ~~g~-----~~~Gpli~~~-~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~ 384 (489)
T cd07126 311 KLED-----LTIGPVLTWT-TERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVT 384 (489)
T ss_pred ccCC-----CcCCCCcCHH-HHHHHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHh
Confidence 9875 4789999998 8999999999998 99999999975432 23 3899999942 678999999
Q ss_pred cCCCcceEEEEecCC
Q 012658 443 ASISPNILHTFNGEN 457 (459)
Q Consensus 443 ~EifgPvl~v~~~~~ 457 (459)
||+||||++|++|+|
T Consensus 385 eEiFGPVl~V~~~~~ 399 (489)
T cd07126 385 TEVFGPFQVVTEYKD 399 (489)
T ss_pred CCCcCCEEEEEEECC
Confidence 999999999999998
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. |
| >cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-75 Score=610.50 Aligned_cols=369 Identities=44% Similarity=0.733 Sum_probs=348.3
Q ss_pred eeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCCh-hhhh
Q 012658 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPF-EQSA 163 (459)
Q Consensus 85 v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~-~~a~ 163 (459)
++||.||+++++++.++.+|++++++.|++||+ .|++++..+|.++|+++++.|+++.++|++++++|+|||. .++.
T Consensus 1 ~~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~a~ 78 (457)
T cd07108 1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAFP--EWAATPARERGKLLARIADALEARSEELARLLALETGNALRTQAR 78 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcHHHHH
Confidence 479999999999999999999999999999999 9999999999999999999999999999999999999997 5765
Q ss_pred hcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCch
Q 012658 164 QTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243 (459)
Q Consensus 164 ~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p 243 (459)
.|+..+++.+++++.+...+.+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 79 -~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p 157 (457)
T cd07108 79 -PEAAVLADLFRYFGGLAGELKGETLPFGPDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAP 157 (457)
T ss_pred -HHHHHHHHHHHHHHHHHHHhCCceeccCCCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCc
Confidence 6999999999999998877766655543455667889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEc
Q 012658 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 323 (459)
Q Consensus 244 ~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~ 323 (459)
.++..+++++.++ +|+|++|+++|++.+.+..|..|+++|.|.||||+.+|+.|++.+++ +++|+++|+|||||+||+
T Consensus 158 ~~~~~l~~~~~~~-lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~-~l~~~~lelgG~~~~iV~ 235 (457)
T cd07108 158 LAVLLLAEILAQV-LPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAAD-RLIPVSLELGGKSPMIVF 235 (457)
T ss_pred HHHHHHHHHHHHh-CCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhc-cCCeEEEECCCCCeeEEC
Confidence 9999999999996 99999999999777888999999999999999999999999999887 889999999999999999
Q ss_pred cCCCHHHHHHHHHHH-hhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHH
Q 012658 324 EDADVDKAAELAHYA-LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 402 (459)
Q Consensus 324 ~dADld~aa~~i~~~-~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i 402 (459)
+|||+|.|++.++++ +|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|
T Consensus 236 ~dAdl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i 315 (457)
T cd07108 236 PDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGYI 315 (457)
T ss_pred CCCCHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHH
Confidence 999999999999999 5999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHh-CCCeEEeCCcccC----CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 403 RSGVD-GGAKLETGGERLG----AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 403 ~~a~~-~Ga~v~~gg~~~~----~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++++ +|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 316 ~~a~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 376 (457)
T cd07108 316 DLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDE 376 (457)
T ss_pred HHHHhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCCH
Confidence 99998 9999999997532 46899999999999999999999999999999999985
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. |
| >cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-75 Score=608.70 Aligned_cols=369 Identities=42% Similarity=0.652 Sum_probs=347.9
Q ss_pred eeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhh
Q 012658 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (459)
Q Consensus 85 v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~ 164 (459)
++||.||+++++++.++.+|++++++.|++|+. .|++++..+|.++|+++++.|.++.++|++++++|+|||..++..
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~~~~~ 78 (450)
T cd07092 1 VVDPATGEEIATVPDASAADVDAAVAAAHAAFP--SWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLHLVRD 78 (450)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHH
Confidence 479999999999999999999999999999999 999999999999999999999999999999999999999877666
Q ss_pred cchHHHHHHHHHHHHhhhhhcCcccCC-CCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCch
Q 012658 165 TEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243 (459)
Q Consensus 165 ~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p 243 (459)
.|+..+++.+++++...+.+.+...+. ..+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 79 ~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~ 158 (450)
T cd07092 79 DELPGAVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTP 158 (450)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcccCccCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccch
Confidence 699999999999998887765543221 1234567899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEc
Q 012658 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 323 (459)
Q Consensus 244 ~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~ 323 (459)
.++..|.++|.+ |+|+|++|+++|++.+.+..|..|++++.|.||||+.+|+.|++.+++ +++|+++|+|||||+||+
T Consensus 159 ~~~~~l~~~~~~-glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~-~~~~~~lelgG~~p~iV~ 236 (450)
T cd07092 159 LTTLLLAELAAE-VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAAD-TLKRVHLELGGKAPVIVF 236 (450)
T ss_pred HHHHHHHHHHHh-cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCCcEEEECCCCCeeEEC
Confidence 999999999999 999999999999777789999999999999999999999999999987 889999999999999999
Q ss_pred cCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHH
Q 012658 324 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 403 (459)
Q Consensus 324 ~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~ 403 (459)
+|||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|+
T Consensus 237 ~dAdl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~i~~~i~ 316 (450)
T cd07092 237 DDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVE 316 (450)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhhCCcCCCCCCCCccCcccCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 404 SGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 404 ~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++. +|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 317 ~a~-~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 370 (450)
T cd07092 317 RAP-AHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDE 370 (450)
T ss_pred HHH-cCCEEEeCCCCCCCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCH
Confidence 998 999999999765457899999999999999999999999999999999985
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. |
| >cd07099 ALDH_DDALDH Methylomonas sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-75 Score=608.62 Aligned_cols=367 Identities=36% Similarity=0.532 Sum_probs=345.5
Q ss_pred eCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhc
Q 012658 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165 (459)
Q Consensus 86 ~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ 165 (459)
+||.||+++++++.++.+|++++++.|++||. .|++++..+|.++|+++++.|+++.++|++++++|+|||+.++. .
T Consensus 1 ~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~-~ 77 (453)
T cd07099 1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQR--AWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRADAG-L 77 (453)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-H
Confidence 58999999999999999999999999999999 99999999999999999999999999999999999999988654 5
Q ss_pred chHHHHHHHHHHHHhhhhhcCcc-cC-C--CCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCC
Q 012658 166 EVPMTTRLFRYYAGWADKIQGLT-AP-A--DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241 (459)
Q Consensus 166 ev~~~~~~l~~~a~~~~~~~~~~-~~-~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~ 241 (459)
|+..+++.++|++..+++..+.. .+ . ..+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 78 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~ 157 (453)
T cd07099 78 EVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEV 157 (453)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCcc
Confidence 99999999999999887765432 22 1 13556788999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEE
Q 012658 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321 (459)
Q Consensus 242 ~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~i 321 (459)
+|+++..|+++|.++|+|+|++|+++|++ +.+..|..| .+|.|.||||+++|+.|++.+++ +++|+++|+|||||+|
T Consensus 158 ~p~~~~~l~~~l~~ag~P~g~~~vv~g~~-~~~~~l~~~-~vd~V~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~~p~i 234 (453)
T cd07099 158 TPLVGELLAEAWAAAGPPQGVLQVVTGDG-ATGAALIDA-GVDKVAFTGSVATGRKVMAAAAE-RLIPVVLELGGKDPMI 234 (453)
T ss_pred chHHHHHHHHHHHHcCCCCCeEEEEeCCc-hHHHHHhcC-CCCEEEEECCHHHHHHHHHHHHh-cCCeEEEECCCCCeEE
Confidence 99999999999999999999999999965 678889987 59999999999999999999987 7999999999999999
Q ss_pred EccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHH
Q 012658 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 401 (459)
Q Consensus 322 V~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~ 401 (459)
|++|||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++
T Consensus 235 V~~dadl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~ 314 (453)
T cd07099 235 VLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRH 314 (453)
T ss_pred ECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCCcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 402 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 402 i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
|++++++|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 315 i~~a~~~ga~~~~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~ 371 (453)
T cd07099 315 VDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADE 371 (453)
T ss_pred HHHHHhCCCEEEeCCCcCCCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCH
Confidence 999999999999999764346899999999999999999999999999999999985
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. |
| >cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-75 Score=608.39 Aligned_cols=366 Identities=37% Similarity=0.570 Sum_probs=348.2
Q ss_pred eeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhh
Q 012658 84 PTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163 (459)
Q Consensus 84 ~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~ 163 (459)
+++||+||+++++++.++.+|++++++.|++|+. .|++++..+|.++|.++++.|+++.++|++++++|+|||+.++.
T Consensus 2 ~~~~P~t~~~~~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~ 79 (453)
T cd07094 2 DVHNPYDGEVIGKVPADDRADAEEALATARAGAE--NRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIKDAR 79 (453)
T ss_pred CccCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH
Confidence 5789999999999999999999999999999999 99999999999999999999999999999999999999999886
Q ss_pred hcchHHHHHHHHHHHHhhhhhcCcccCCC-----CCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeec
Q 012658 164 QTEVPMTTRLFRYYAGWADKIQGLTAPAD-----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 238 (459)
Q Consensus 164 ~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKp 238 (459)
.|+..+++.+++++..+++..+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+||
T Consensus 80 -~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~Kp 158 (453)
T cd07094 80 -VEVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKP 158 (453)
T ss_pred -HHHHHHHHHHHHHHHHHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEEC
Confidence 4999999999999998888766544432 2456678899999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcC
Q 012658 239 AEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS 318 (459)
Q Consensus 239 s~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~ 318 (459)
|+.+|+++..++++|.++|+|+|+||+++|++.+++..|.+|++++.|.||||+++|+.|++.+ +++|+++|+||||
T Consensus 159 s~~~p~~~~~l~~~l~~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a---~~~~~~lelGGk~ 235 (453)
T cd07094 159 ASKTPLSALELAKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANA---GGKRIALELGGNA 235 (453)
T ss_pred CCcchHHHHHHHHHHHHcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHc---CCCceEEecCCCC
Confidence 9999999999999999999999999999998778899999999999999999999999999876 5799999999999
Q ss_pred cEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHH
Q 012658 319 PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 398 (459)
Q Consensus 319 p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i 398 (459)
|+||++|||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++
T Consensus 236 ~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~ 315 (453)
T cd07094 236 PVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERV 315 (453)
T ss_pred ceEECCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 399 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 399 ~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
.++|++++++|+++++||.. .|+|++|||+.+++++|+++++|+||||++|++|+|+
T Consensus 316 ~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~ 372 (453)
T cd07094 316 ERWVEEAVEAGARLLCGGER---DGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDF 372 (453)
T ss_pred HHHHHHHHHCCCEEEeCccC---CCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCH
Confidence 99999999999999999854 4899999999999999999999999999999999985
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. |
| >cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-75 Score=607.35 Aligned_cols=368 Identities=33% Similarity=0.501 Sum_probs=348.3
Q ss_pred eCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhc
Q 012658 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165 (459)
Q Consensus 86 ~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ 165 (459)
+||.||+++++++.++.+|++++++.|++|+. .|++++..+|.++|+++++.|+++.++|++++++|+|||..++. .
T Consensus 1 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~-~ 77 (452)
T cd07102 1 ISPIDGSVIAERPLASLEAVRAALERARAAQK--GWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQAG-G 77 (452)
T ss_pred CCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHH-H
Confidence 58999999999999999999999999999999 99999999999999999999999999999999999999999875 5
Q ss_pred chHHHHHHHHHHHHhhhhhcCcc-cCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchH
Q 012658 166 EVPMTTRLFRYYAGWADKIQGLT-APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244 (459)
Q Consensus 166 ev~~~~~~l~~~a~~~~~~~~~~-~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~ 244 (459)
|+..+++.++|++..+++..+.. .+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus 78 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~ 157 (452)
T cd07102 78 EIRGMLERARYMISIAEEALADIRVPEKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPL 157 (452)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcccCCCCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcH
Confidence 99999999999999887765442 33344566788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEcc
Q 012658 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324 (459)
Q Consensus 245 ~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~ 324 (459)
++..|.++|.++|+|+|++|+|++++ +.+..|+.|++|+.|.||||+++|+.|++.+++ +++|+++|+|||||+||++
T Consensus 158 ~~~~l~~~l~~aGlP~g~~~~v~g~~-~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~-~~~~v~lelgG~~~~iV~~ 235 (452)
T cd07102 158 CGERFAAAFAEAGLPEGVFQVLHLSH-ETSAALIADPRIDHVSFTGSVAGGRAIQRAAAG-RFIKVGLELGGKDPAYVRP 235 (452)
T ss_pred HHHHHHHHHHhcCCCcCcEEEEeCCc-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCCcEEEECCCCCceEEcC
Confidence 99999999999999999999999966 788999999999999999999999999998886 8899999999999999999
Q ss_pred CCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 012658 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 404 (459)
Q Consensus 325 dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~ 404 (459)
|||+|.|++.+++++|+|+||.|++++++|||++++|+|+++|++++.++++|+|.++++++||+++..+++++.++|++
T Consensus 236 dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~l~vg~p~~~~~~~gpli~~~~~~~i~~~i~~ 315 (452)
T cd07102 236 DADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIAD 315 (452)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCeEEeCCccc---CCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 405 GVDGGAKLETGGERL---GAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 405 a~~~Ga~v~~gg~~~---~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++++|+++++||... ...|+|++|||+.+++++|+++++|+||||++|++|+|+
T Consensus 316 a~~~ga~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~ 372 (452)
T cd07102 316 AIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSD 372 (452)
T ss_pred HHhCCCEEEeCCCCCCCCCCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCH
Confidence 999999999998643 246899999999999999999999999999999999985
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. |
| >cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-75 Score=606.57 Aligned_cols=370 Identities=41% Similarity=0.673 Sum_probs=351.6
Q ss_pred eeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhh
Q 012658 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (459)
Q Consensus 85 v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~ 164 (459)
++||.||+++++++.++.+|++++++.|++|++ .|++++..+|.++|+++++.|+++.++|++++++|+|||..++.
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~- 77 (451)
T cd07103 1 VINPATGEVIGEVPDAGAADADAAIDAAAAAFK--TWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLAEAR- 77 (451)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-
Confidence 479999999999999999999999999999999 99999999999999999999999999999999999999999976
Q ss_pred cchHHHHHHHHHHHHhhhhhcCcccCCC-CCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCch
Q 012658 165 TEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243 (459)
Q Consensus 165 ~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p 243 (459)
.|+..+++.++|++..+++..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 78 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~ 157 (451)
T cd07103 78 GEVDYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETP 157 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCc
Confidence 4999999999999988877766554432 355678899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEc
Q 012658 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 323 (459)
Q Consensus 244 ~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~ 323 (459)
.++..++++|.++|+|+|++|++++++.+.+..|..|+++|.|.||||+.+|+.|.+.+++ +++|+++|+|||||+||+
T Consensus 158 ~~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~ 236 (451)
T cd07103 158 LSALALAELAEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAAD-TVKRVSLELGGNAPFIVF 236 (451)
T ss_pred HHHHHHHHHHHHcCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCcEEEECCCCCeEEEC
Confidence 9999999999999999999999999777788999999999999999999999999999887 889999999999999999
Q ss_pred cCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHH
Q 012658 324 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 403 (459)
Q Consensus 324 ~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~ 403 (459)
+|||+|.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|+
T Consensus 237 ~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~i~ 316 (451)
T cd07103 237 DDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVE 316 (451)
T ss_pred CCCCHHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcCcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 404 SGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 404 ~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++.+|+++++||......|+|++|||+.+++++|.++++|+||||++|++|+|+
T Consensus 317 ~a~~~ga~~l~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~ 371 (451)
T cd07103 317 DAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTE 371 (451)
T ss_pred HHHHCCCEEEeCCCcCCCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCH
Confidence 9999999999999765446899999999999999999999999999999999985
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. |
| >cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-75 Score=603.96 Aligned_cols=360 Identities=38% Similarity=0.574 Sum_probs=341.3
Q ss_pred CCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHH
Q 012658 91 GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMT 170 (459)
Q Consensus 91 g~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~ 170 (459)
|+++++++.++.+|++++++.|++||+ .|++++..+|.++|+++++.|+++.++|++++++|+|||+.++. .|+..+
T Consensus 1 ~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~ 77 (443)
T cd07152 1 GAVLGEVGVADAADVDRAAARAAAAQR--AWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKAG-FEVGAA 77 (443)
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHH
Confidence 688999999999999999999999999 99999999999999999999999999999999999999998876 499999
Q ss_pred HHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHH-HHH
Q 012658 171 TRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA-LYV 249 (459)
Q Consensus 171 ~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~-~~l 249 (459)
++.+++++...++..+...+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++ ..+
T Consensus 78 i~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~~l 157 (443)
T cd07152 78 IGELHEAAGLPTQPQGEILPSAPGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVI 157 (443)
T ss_pred HHHHHHHHHhHHHhCCccccccCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHHHH
Confidence 9999999988766555544444456678899999999999999999999999999999999999999999999996 789
Q ss_pred HHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEccCCCHH
Q 012658 250 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 329 (459)
Q Consensus 250 ~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~dADld 329 (459)
+++|.++|+|+|++|+++| +.+.+..|..|++++.|.||||+.+|+.|.+.+++ +++|+++|+|||||+||++|||+|
T Consensus 158 ~~~~~~ag~P~gvv~~v~g-~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~-~~~~~~lElGGk~~~iV~~dAdl~ 235 (443)
T cd07152 158 ARLFEEAGLPAGVLHVLPG-GADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGR-HLKKVSLELGGKNALIVLDDADLD 235 (443)
T ss_pred HHHHHHhCcCcCcEEEecC-ChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCcEEEECCCCCeEEECCCCCHH
Confidence 9999999999999999998 56788999999999999999999999999999887 899999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCC
Q 012658 330 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 409 (459)
Q Consensus 330 ~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~G 409 (459)
.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++|
T Consensus 236 ~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~G 315 (443)
T cd07152 236 LAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAAG 315 (443)
T ss_pred HHHHHHHHHHHhhcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 410 AKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 410 a~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 316 a~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 361 (443)
T cd07152 316 ARLEAGGTY---DGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSD 361 (443)
T ss_pred CEEEeccCc---CCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCH
Confidence 999999964 4899999999999999999999999999999999985
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. |
| >cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-75 Score=605.98 Aligned_cols=366 Identities=34% Similarity=0.519 Sum_probs=344.0
Q ss_pred eeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhh
Q 012658 83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162 (459)
Q Consensus 83 ~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a 162 (459)
++++||.||+++++++.++.+|++++++.|++|+. .|++++..+|.++|+++++.|+++.++|++++++|+|||+.++
T Consensus 1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 78 (452)
T cd07147 1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFR--PMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKDA 78 (452)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH
Confidence 46899999999999999999999999999999999 9999999999999999999999999999999999999999887
Q ss_pred hhcchHHHHHHHHHHHHhhhhhcCcccCC-----CCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEee
Q 012658 163 AQTEVPMTTRLFRYYAGWADKIQGLTAPA-----DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLK 237 (459)
Q Consensus 163 ~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-----~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlK 237 (459)
.. |+..++..+++++..+.+..+...+. ..+...+..++|+|||++|+|||||+...++++++||++||+||+|
T Consensus 79 ~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlK 157 (452)
T cd07147 79 RG-EVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLK 157 (452)
T ss_pred HH-HHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEE
Confidence 64 99999999999998877665443221 1244567889999999999999999999999999999999999999
Q ss_pred cCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCc
Q 012658 238 TAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 317 (459)
Q Consensus 238 ps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~ 317 (459)
||+.+|.++..|+++|.++|+|+|+||+++++ .+.+..|..|++++.|.||||+.+|+.|++.++. +|+++|+|||
T Consensus 158 ps~~~p~~~~~l~~~l~~ag~P~g~v~~v~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a~~---~~v~lelgG~ 233 (452)
T cd07147 158 PASRTPLSALILGEVLAETGLPKGAFSVLPCS-RDDADLLVTDERIKLLSFTGSPAVGWDLKARAGK---KKVVLELGGN 233 (452)
T ss_pred CCCCCcHHHHHHHHHHHHcCCCcCcEEEEeCC-ccchhHHhcCCCCCEEEEECCHHHHHHHHHHhCc---CceEeecCCC
Confidence 99999999999999999999999999999985 4678999999999999999999999999987753 7999999999
Q ss_pred CcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHH
Q 012658 318 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 397 (459)
Q Consensus 318 ~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~ 397 (459)
||+||++|||+|.|++.+++++|.|+||.|+++++||||+++||+|+++|++++.++++|+|.++++++||++++.++++
T Consensus 234 ~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~ 313 (452)
T cd07147 234 AAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAER 313 (452)
T ss_pred CcEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 398 ILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 398 i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 314 ~~~~i~~a~~~Ga~~l~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 371 (452)
T cd07147 314 VEGWVNEAVDAGAKLLTGGKR---DGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDF 371 (452)
T ss_pred HHHHHHHHHHCCCEEEecCCc---CCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCH
Confidence 999999999999999999964 4899999999999999999999999999999999985
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. |
| >cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-74 Score=604.43 Aligned_cols=369 Identities=30% Similarity=0.503 Sum_probs=343.1
Q ss_pred eCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhc
Q 012658 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165 (459)
Q Consensus 86 ~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ 165 (459)
+||.||+++++++.++.+|++++++.|++|++ .|++++..+|.++|+++++.|.++.++|++++++|+|||+.++...
T Consensus 1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ 78 (465)
T cd07098 1 YDPATGQHLGSVPADTPEDVDEAIAAARAAQR--EWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLG 78 (465)
T ss_pred CCCCCCCeeEEeeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Confidence 58999999999999999999999999999999 9999999999999999999999999999999999999999998777
Q ss_pred chHHHHHHHHHHHHhhhhhcCc-ccCCC---CCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCC
Q 012658 166 EVPMTTRLFRYYAGWADKIQGL-TAPAD---GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241 (459)
Q Consensus 166 ev~~~~~~l~~~a~~~~~~~~~-~~~~~---~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~ 241 (459)
|+..+++.++|++..++..... ..+.. .+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.
T Consensus 79 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~ 158 (465)
T cd07098 79 EILVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQ 158 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECCCc
Confidence 9999999999999877664322 22211 1344678899999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHH----HHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCc
Q 012658 242 TPLSALYVSKL----LHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 317 (459)
Q Consensus 242 ~p~~~~~l~~l----l~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~ 317 (459)
+|+++..++++ |.++|+|+|+||+|+|++ +.+..|..|++|+.|.||||+.+|+.|.+.+++ +++|+++|+|||
T Consensus 159 ~p~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~-~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~-~~~~~~lelgG~ 236 (465)
T cd07098 159 VAWSSGFFLSIIRECLAACGHDPDLVQLVTCLP-ETAEALTSHPVIDHITFIGSPPVGKKVMAAAAE-SLTPVVLELGGK 236 (465)
T ss_pred CcHHHHHHHHHHHHHHHhcCCCCCeEEEEECCH-HHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeEEEECCCC
Confidence 99999976655 468999999999999954 789999999999999999999999999999887 889999999999
Q ss_pred CcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHH
Q 012658 318 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 397 (459)
Q Consensus 318 ~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~ 397 (459)
||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|++++.++++|+|+++++++||++++.++++
T Consensus 237 ~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~ 316 (465)
T cd07098 237 DPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDR 316 (465)
T ss_pred CeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCeEEeCCcccC----CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 398 ILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 398 i~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+.++|++++++|+++++||.... .+|+|++|||+.+++++|+++++|+||||++|++|+|+
T Consensus 317 ~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 381 (465)
T cd07098 317 LEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDD 381 (465)
T ss_pred HHHHHHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCH
Confidence 99999999999999999986432 35899999999999999999999999999999999985
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. |
| >cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-74 Score=601.13 Aligned_cols=363 Identities=36% Similarity=0.521 Sum_probs=341.1
Q ss_pred eeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhh
Q 012658 84 PTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163 (459)
Q Consensus 84 ~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~ 163 (459)
+++||+||+++++++.++.+|++++++.|++ .|++++..+|.++|+++++.|++++++|++++++|+|||+.++.
T Consensus 2 ~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~-----~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~ 76 (451)
T cd07146 2 EVRNPYTGEVVGTVPAGTEEALREALALAAS-----YRSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLKDTR 76 (451)
T ss_pred CccCCCCCCEEEEEcCCCHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence 5789999999999999999999999999876 47789999999999999999999999999999999999999976
Q ss_pred hcchHHHHHHHHHHHHhhhhhcCcccCCC-----CCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeec
Q 012658 164 QTEVPMTTRLFRYYAGWADKIQGLTAPAD-----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 238 (459)
Q Consensus 164 ~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKp 238 (459)
.|+..+++.++|++..+....+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+||
T Consensus 77 -~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKp 155 (451)
T cd07146 77 -YEVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKP 155 (451)
T ss_pred -HHHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEEC
Confidence 5999999999999988776655443321 2445678899999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcC
Q 012658 239 AEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS 318 (459)
Q Consensus 239 s~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~ 318 (459)
|+.+|+++..+.++|.++|+|+|++|+++|++.+++..|.+|++++.|+||||+.+|+.|.+.++ ++|+++|+||||
T Consensus 156 s~~~p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~a~---~~~~~lElGG~~ 232 (451)
T cd07146 156 SEKTPLSAIYLADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAG---YKRQLLELGGND 232 (451)
T ss_pred CCCchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhc---CCceeeecCCCc
Confidence 99999999999999999999999999999977788999999999999999999999999998764 589999999999
Q ss_pred cEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHH
Q 012658 319 PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 398 (459)
Q Consensus 319 p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i 398 (459)
|+||++|||+|.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++++++||++++.+++++
T Consensus 233 p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v 312 (451)
T cd07146 233 PLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQI 312 (451)
T ss_pred eEEECCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 399 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 399 ~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
.++|++++++|+++++||.. .|+|++|||+.+++++|.+++||+||||++|++|+|+
T Consensus 313 ~~~v~~a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 369 (451)
T cd07146 313 ENRVEEAIAQGARVLLGNQR---QGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDL 369 (451)
T ss_pred HHHHHHHHhCCCEEEeCCCc---CCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCH
Confidence 99999999999999999964 4899999999999999999999999999999999985
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. |
| >cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-74 Score=603.36 Aligned_cols=371 Identities=44% Similarity=0.769 Sum_probs=351.6
Q ss_pred eeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhh
Q 012658 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (459)
Q Consensus 85 v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~ 164 (459)
++||.||+++++++.++.+|++++++.|++|+. .|++++.++|.++|+++++.|+++.++|++++++|+|||..++..
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~ 78 (455)
T cd07093 1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFP--GWSRMSPAERARILHKVADLIEARADELALLESLDTGKPITLART 78 (455)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 369999999999999999999999999999999 999999999999999999999999999999999999999988766
Q ss_pred cchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchH
Q 012658 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244 (459)
Q Consensus 165 ~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~ 244 (459)
.|+..+++.+++|+....+..+...+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus 79 ~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~p~ 158 (455)
T cd07093 79 RDIPRAAANFRFFADYILQLDGESYPQDGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPL 158 (455)
T ss_pred HHHHHHHHHHHHHHHhHHHhCCccccCCCCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcCcH
Confidence 79999999999999887765544444444667788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEcc
Q 012658 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324 (459)
Q Consensus 245 ~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~ 324 (459)
++..+.++|.++|+|+|+||+++|.+.+.+..|..|++++.|.||||+.+|+.|.+.+++ +++|+++|+|||||+||++
T Consensus 159 ~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~~ 237 (455)
T cd07093 159 TAWLLAELANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAP-NLKPVSLELGGKNPNIVFA 237 (455)
T ss_pred HHHHHHHHHHhcCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhh-cccceEeecCCCCceEECC
Confidence 999999999999999999999999777889999999999999999999999999999987 8899999999999999999
Q ss_pred CCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 012658 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 404 (459)
Q Consensus 325 dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~ 404 (459)
|||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++
T Consensus 238 dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~ 317 (455)
T cd07093 238 DADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVEL 317 (455)
T ss_pred CCCHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCeEEeCCcccC----CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 405 GVDGGAKLETGGERLG----AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 405 a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 318 a~~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 375 (455)
T cd07093 318 ARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDE 375 (455)
T ss_pred HHHCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCH
Confidence 9999999999997542 35899999999999999999999999999999999985
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. |
| >PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-74 Score=637.73 Aligned_cols=381 Identities=34% Similarity=0.466 Sum_probs=356.0
Q ss_pred ccCceecCEeeeCCCCCeeeeeCCCCCC-EEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHc
Q 012658 65 YTQLLINGQFVDSASGKTFPTLDPRTGD-VITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (459)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~-~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~ 143 (459)
..+.+||| ++.+++++||+|++ ++++++.++.+|+++|++.|++||+ .|+.++..+|.++|+++++.|+++
T Consensus 552 ~~~~~i~g------~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Ai~aA~~A~~--~W~~~~~~~Ra~iL~kaAdll~~~ 623 (1038)
T PRK11904 552 QAGPIING------EGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFP--AWSRTPVEERAAILERAADLLEAN 623 (1038)
T ss_pred eecceEcC------CCCeEEEECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHh
Confidence 44667888 46789999999988 9999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCc--ccCCCCCceEEEEEccceEEEEEcCCCchHHhhH
Q 012658 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL--TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221 (459)
Q Consensus 144 ~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~--~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 221 (459)
.++|+.++++|+|||+.++. .|+..+++.++||+..+++..+. .++...+..++..++|+|||++|+|||||+..++
T Consensus 624 ~~eL~~l~~~E~GK~~~~a~-~EV~eaid~lr~ya~~a~~~~~~~~~l~g~~ge~n~~~~~P~GVv~~IsPwNfPlai~~ 702 (1038)
T PRK11904 624 RAELIALCVREAGKTLQDAI-AEVREAVDFCRYYAAQARRLFGAPEKLPGPTGESNELRLHGRGVFVCISPWNFPLAIFL 702 (1038)
T ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCCcccCCCCCceeEEEEecceEEEEECCCccHHHHHH
Confidence 99999999999999999875 59999999999999999887643 3454557788899999999999999999999999
Q ss_pred HHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHH
Q 012658 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (459)
Q Consensus 222 ~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 301 (459)
+++++||++||+||+|||+++|+++..++++|.++|+|+|+||+|+|++.+++..|+.|++|+.|+||||+++|+.|.+.
T Consensus 703 ~~i~aALaaGNtVIlKPse~tpl~a~~l~~ll~eAGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~ 782 (1038)
T PRK11904 703 GQVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRT 782 (1038)
T ss_pred HHHHHHHHcCCEEEeeCCCcCHHHHHHHHHHHHHhCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999998
Q ss_pred HHhc--CCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCC
Q 012658 302 AAKS--NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379 (459)
Q Consensus 302 ~a~~--~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p 379 (459)
++.+ ..+|+++|+|||||+||++|||+|.|++.+++++|.++||.|++++++|||+++||+|+++|+++++++++|+|
T Consensus 783 ~A~~~g~~~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~fl~~L~~~~~~l~vGdp 862 (1038)
T PRK11904 783 LAARDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSALRVLFVQEDIADRVIEMLKGAMAELKVGDP 862 (1038)
T ss_pred HhhccCCCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEeHHHHHHHHHHHHHHHHhccCCCc
Confidence 8863 26899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccC--CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCC
Q 012658 380 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGEN 457 (459)
Q Consensus 380 ~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~ 457 (459)
.++++++||+|++.+++++.++|+++++ |+++++||...+ ..|+|++|||+.. +++.+++||+||||++|++|++
T Consensus 863 ~d~~t~~GPvI~~~a~~~l~~~I~~a~~-ga~vl~gg~~~~~~~~G~fv~PTvi~~--~~~~~~~eEiFGPVL~V~~~~~ 939 (1038)
T PRK11904 863 RLLSTDVGPVIDAEAKANLDAHIERMKR-EARLLAQLPLPAGTENGHFVAPTAFEI--DSISQLEREVFGPILHVIRYKA 939 (1038)
T ss_pred ccccCCccCCCCHHHHHHHHHHHHHHHc-CCEEEeCCCCCCCCCCceEEeeEEEcc--CCcHHhCCCCcCcEEEEEEeCC
Confidence 9999999999999999999999999876 899999997543 3599999999963 6788999999999999999973
|
|
| >cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-74 Score=595.85 Aligned_cols=348 Identities=34% Similarity=0.503 Sum_probs=328.3
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhh
Q 012658 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184 (459)
Q Consensus 105 v~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~ 184 (459)
++++++.|++||+ .|+.++..+|.++|+++++.|+++.++|++++++|+|||..++. .|+..+++.++|++..+++.
T Consensus 1 v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~ 77 (429)
T cd07100 1 IEAALDRAHAAFL--AWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEAR-AEVEKCAWICRYYAENAEAF 77 (429)
T ss_pred CHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHh
Confidence 4789999999999 99999999999999999999999999999999999999999986 59999999999999998876
Q ss_pred cC-cccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcE
Q 012658 185 QG-LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVL 263 (459)
Q Consensus 185 ~~-~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v 263 (459)
.. ...+.+ +...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..|+++|.++|+|+|++
T Consensus 78 ~~~~~~~~~-~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~aglP~gvv 156 (429)
T cd07100 78 LADEPIETD-AGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVF 156 (429)
T ss_pred cCCeeccCC-CceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCcE
Confidence 43 333333 4567889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccC
Q 012658 264 NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 343 (459)
Q Consensus 264 ~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~ 343 (459)
|+|+|++ +.+..|..|++|+.|.||||+++|+.|++.+++ ++||+++|+|||||+||++|||+|.|++.|++++|.|+
T Consensus 157 ~~v~g~~-~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~-~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~ 234 (429)
T cd07100 157 QNLLIDS-DQVEAIIADPRVRGVTLTGSERAGRAVAAEAGK-NLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNA 234 (429)
T ss_pred EEEeCCc-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhcc
Confidence 9999954 567899999999999999999999999999887 89999999999999999999999999999999999999
Q ss_pred CCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCC
Q 012658 344 GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 423 (459)
Q Consensus 344 GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g 423 (459)
||.|+++++||||+++||+|+++|++++.++++|+|+++++++||++++.+++++.++|++++++|+++++||......|
T Consensus 235 GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g 314 (429)
T cd07100 235 GQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPDGPG 314 (429)
T ss_pred CCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999997644468
Q ss_pred ceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 424 YYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 424 ~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 315 ~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~ 349 (429)
T cd07100 315 AFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDE 349 (429)
T ss_pred eEEcCEEeecCCCCCHHHhCCCCCCeEEEeeeCCH
Confidence 99999999999999999999999999999999985
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. |
| >cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-73 Score=590.63 Aligned_cols=350 Identities=33% Similarity=0.459 Sum_probs=329.0
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhh
Q 012658 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 183 (459)
Q Consensus 104 dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~ 183 (459)
|++++++.|++||+ .|++++..+|.++|+++++.|+++.++|++++++|+|||+.++. .|+..+++.+++++....+
T Consensus 1 ~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~~~~~~~ 77 (431)
T cd07095 1 QVDAAVAAARAAFP--GWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQ-TEVAAMAGKIDISIKAYHE 77 (431)
T ss_pred CHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 57899999999999 99999999999999999999999999999999999999999976 5999999999999988777
Q ss_pred hcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcE
Q 012658 184 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVL 263 (459)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v 263 (459)
..+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.++|.++|+|+|++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~ag~P~g~~ 157 (431)
T cd07095 78 RTGERATPMAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVL 157 (431)
T ss_pred hcCCcccCCCCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHHhCcChhHh
Confidence 65544332335577889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccC
Q 012658 264 NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 343 (459)
Q Consensus 264 ~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~ 343 (459)
|+++| +.+.+..|.+|+++|.|.||||+++|+.|++.++.+.++++++|+|||||+||++|||+|.|++.+++++|.|+
T Consensus 158 ~~v~g-~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~~~~~~ 236 (431)
T cd07095 158 NLVQG-GRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTA 236 (431)
T ss_pred eEEeC-cHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhC
Confidence 99998 45678999999999999999999999999998876467999999999999999999999999999999999999
Q ss_pred CCccccCceeEeeCc-chHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCC
Q 012658 344 GQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 422 (459)
Q Consensus 344 GQ~C~a~~~v~V~e~-v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~ 422 (459)
||.|+++++||||++ ++|+|+++|++++.++++|+|.++++++||+++..+++++.+++++++++|+++++||.....+
T Consensus 237 GQ~C~a~~rv~V~~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~~~~~~ 316 (431)
T cd07095 237 GQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLVAG 316 (431)
T ss_pred CCCCCCCeEEEEcCcchHHHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCCcCCCC
Confidence 999999999999999 9999999999999999999999999999999999999999999999999999999999765557
Q ss_pred CceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 423 GYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 423 g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
|+|++|||+ +++++|.+++||+||||++|++|+|+
T Consensus 317 g~~~~Ptv~-~v~~~~~i~~eE~FgPvl~v~~~~~~ 351 (431)
T cd07095 317 TAFLSPGII-DVTDAADVPDEEIFGPLLQVYRYDDF 351 (431)
T ss_pred CeEEcCEEE-ecCCCChHHhCCCcCCeEEEEeeCCH
Confidence 999999999 79999999999999999999999984
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. |
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-73 Score=638.74 Aligned_cols=372 Identities=29% Similarity=0.430 Sum_probs=347.4
Q ss_pred ccCceecCEeeeCCCCCeeeeeCCCC-CCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHc
Q 012658 65 YTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (459)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~ 143 (459)
....+|+|+. .++.+++++||.| ++++++++.++.+|+++|++.|++||+ .|+.+|..+|+++|++++++|+++
T Consensus 646 ~~~p~~~~~~---~~~~~~~v~nPa~~~~~vg~v~~a~~~dv~~Av~aA~~A~~--~W~~~p~~eRa~iL~r~Adlle~~ 720 (1318)
T PRK11809 646 QAAPMLEDPV---AAGEMSPVINPADPRDIVGYVREATPAEVEQALESAVNAAP--IWFATPPAERAAILERAADLMEAQ 720 (1318)
T ss_pred ccCCcccCcC---CCCCEEEeECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHC
Confidence 4466778842 3577899999998 899999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHH
Q 012658 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (459)
Q Consensus 144 ~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (459)
.++|+.++++|+|||+.++. .|+..+++.++||+..++.... ...++|+|||++|+|||||+.+++++
T Consensus 721 ~~eL~~l~~~EaGKt~~~A~-~EV~eaidflryyA~~a~~~~~-----------~~~~~PlGVV~~IsPWNFPlai~~g~ 788 (1318)
T PRK11809 721 MQTLMGLLVREAGKTFSNAI-AEVREAVDFLRYYAGQVRDDFD-----------NDTHRPLGPVVCISPWNFPLAIFTGQ 788 (1318)
T ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcC-----------CceeecccEEEEECCCccHHHHHHHH
Confidence 99999999999999999875 5999999999999988764311 24589999999999999999999999
Q ss_pred HHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHH
Q 012658 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (459)
Q Consensus 224 l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a 303 (459)
+++||++||+||+||++++|+++..++++|.++|+|+|+||+|+|.+.+++..|+.|++|+.|+||||+++|+.|.+.++
T Consensus 789 iaaALaAGN~VV~KPseqTpl~a~~lv~ll~eAGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~aA 868 (1318)
T PRK11809 789 VAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLA 868 (1318)
T ss_pred HHHHHHcCCeEEEeCCCCcHHHHHHHHHHHHHhCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999988
Q ss_pred hcCC------CceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccC
Q 012658 304 KSNL------KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 377 (459)
Q Consensus 304 ~~~~------~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG 377 (459)
+ ++ +|+++|+||+|++||++|||+|.+++.+++++|.++||.|++.+++|||++++|+|+++|+++++++++|
T Consensus 869 ~-~l~~~g~~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e~Iad~fl~~L~~a~~~l~vG 947 (1318)
T PRK11809 869 G-RLDPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVADRTLKMLRGAMAECRMG 947 (1318)
T ss_pred h-hcccccCceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEcHHHHHHHHHHHHHHHHhcCCC
Confidence 6 43 7999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccC---CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEe
Q 012658 378 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG---AKGYYIKPTVFTGVKVLILISPASISPNILHTFN 454 (459)
Q Consensus 378 ~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~---~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~ 454 (459)
+|.+.++++||+|++++++++.++|++++++|++++.||.... ..|+|++|||+.. +++.++++|+||||++|++
T Consensus 948 dP~~~~tdvGPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~~~~~~G~fv~PTIi~~--~~~~~l~eEiFGPVL~V~~ 1025 (1318)
T PRK11809 948 NPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPPTLIEL--DSFDELKREVFGPVLHVVR 1025 (1318)
T ss_pred CcccccCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCCCCCCCeEEeeEEEec--cchhhhcCcccCceEEEEE
Confidence 9999999999999999999999999999999999999875422 4599999999974 6788999999999999999
Q ss_pred cC
Q 012658 455 GE 456 (459)
Q Consensus 455 ~~ 456 (459)
|+
T Consensus 1026 ~~ 1027 (1318)
T PRK11809 1026 YN 1027 (1318)
T ss_pred eC
Confidence 96
|
|
| >cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-73 Score=592.88 Aligned_cols=367 Identities=40% Similarity=0.620 Sum_probs=345.7
Q ss_pred eeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhh
Q 012658 83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162 (459)
Q Consensus 83 ~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a 162 (459)
|+++||+||+++++++.++.++++++++.|++|+. .|++++..+|.++|+++++.|+++.++|+++++.|+|||..++
T Consensus 1 ~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 78 (453)
T cd07149 1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAK--EMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIKDA 78 (453)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHH
Confidence 46889999999999999999999999999999999 9999999999999999999999999999999999999999998
Q ss_pred hhcchHHHHHHHHHHHHhhhhhcCcccCCC-----CCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEee
Q 012658 163 AQTEVPMTTRLFRYYAGWADKIQGLTAPAD-----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLK 237 (459)
Q Consensus 163 ~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlK 237 (459)
. .|+..+++.+++++..++...+...+.+ .+...+..++|+|||++|+|||||+...++++++||++||+||+|
T Consensus 79 ~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~K 157 (453)
T cd07149 79 R-KEVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLK 157 (453)
T ss_pred H-HHHHHHHHHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEE
Confidence 6 5999999999999988776655433321 233457889999999999999999999999999999999999999
Q ss_pred cCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCc
Q 012658 238 TAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 317 (459)
Q Consensus 238 ps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~ 317 (459)
||+.+|+++..|.++|.++|+|+|++|+++|++.+.+..|..|+++|.|.||||+++|+.|++.+ .++|+++|+|||
T Consensus 158 ps~~~p~~~~~l~~~l~~ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a---~~~~~~lelGGk 234 (453)
T cd07149 158 PASQTPLSALKLAELLLEAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKA---GLKKVTLELGSN 234 (453)
T ss_pred CCCcchHHHHHHHHHHHHcCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHc---CCCceeeecCCC
Confidence 99999999999999999999999999999997777789999999999999999999999998876 468999999999
Q ss_pred CcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHH
Q 012658 318 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 397 (459)
Q Consensus 318 ~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~ 397 (459)
||+||++|+|+|.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++.+++|+|.++++++||++++.++++
T Consensus 235 ~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~ 314 (453)
T cd07149 235 AAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAER 314 (453)
T ss_pred ceEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHHHHHHHHHHHHHHhCCcCCCCCCCCccccccCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 398 ILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 398 i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+.++|++++.+|+++++||.. .|+|++|||+.+++++|.+++||+||||++|++|+|+
T Consensus 315 ~~~~i~~a~~~ga~v~~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 372 (453)
T cd07149 315 IEEWVEEAVEGGARLLTGGKR---DGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTL 372 (453)
T ss_pred HHHHHHHHHHCCCEEEeCCCC---CCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCH
Confidence 999999999999999999864 3799999999999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-71 Score=576.67 Aligned_cols=348 Identities=27% Similarity=0.353 Sum_probs=323.6
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHH
Q 012658 100 GEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179 (459)
Q Consensus 100 ~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~ 179 (459)
.+.+|+++|++.|++||+ .|+.++..+|.++|+++++.|++|.++|++++++|+|||+.++...|+..+++.++||+.
T Consensus 2 ~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~ 79 (436)
T cd07135 2 TPLDEIDSIHSRLRATFR--SGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLK 79 (436)
T ss_pred CCHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHH
Confidence 578999999999999999 999999999999999999999999999999999999999988765699999999999999
Q ss_pred hhhhhcCcccCCC-----CCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHH
Q 012658 180 WADKIQGLTAPAD-----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH 254 (459)
Q Consensus 180 ~~~~~~~~~~~~~-----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~ 254 (459)
.++++.....+.. .+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l~~ 159 (436)
T cd07135 80 NLKKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVP 159 (436)
T ss_pred HHHHhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHH
Confidence 8877543322211 13456889999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHH
Q 012658 255 EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAEL 334 (459)
Q Consensus 255 ~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~ 334 (459)
+ |+|+|++|+++|.+.+.+ .|+.|+ +|.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|||+|.|++.
T Consensus 160 ~-~lP~g~v~vv~g~~~~~~-~l~~~~-vd~v~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~~~~iV~~dADl~~aa~~ 235 (436)
T cd07135 160 K-YLDPDAFQVVQGGVPETT-ALLEQK-FDKIFYTGSGRVGRIIAEAAAK-HLTPVTLELGGKSPVIVTKNADLELAAKR 235 (436)
T ss_pred H-hCCcCEEEEEcCCchhHH-HHHhCC-CCEEEEECCcHHHHHHHHHHHh-cCCCeEEEccCCCcEEECCCCCHHHHHHH
Confidence 9 699999999998665654 588999 9999999999999999998887 89999999999999999999999999999
Q ss_pred HHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEe
Q 012658 335 AHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLET 414 (459)
Q Consensus 335 i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~ 414 (459)
+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+| ++++++||+++..+++++.++|+++ |+++++
T Consensus 236 i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~i~~~v~~a---g~~v~~ 311 (436)
T cd07135 236 ILWGKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGA-NASPDYTRIVNPRHFNRLKSLLDTT---KGKVVI 311 (436)
T ss_pred HHHHHhccCCceecCCCEEeccHHHHHHHHHHHHHHHHHhcCCCC-CCCCCcCCCCCHHHHHHHHHHHHhc---CCeEEE
Confidence 999999999999999999999999999999999999999999999 9999999999999999999999986 889999
Q ss_pred CCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 415 GGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 415 gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
||... .+|+|++|||+.+++++|.+++||+||||++|++|+|+
T Consensus 312 gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~ 354 (436)
T cd07135 312 GGEMD-EATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDL 354 (436)
T ss_pred CCCcC-CCCCEEccEEEecCCCccHHHhccccCCceEEEecCCH
Confidence 99764 36899999999999999999999999999999999985
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. |
| >PLN02203 aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-71 Score=579.26 Aligned_cols=351 Identities=25% Similarity=0.342 Sum_probs=325.9
Q ss_pred cCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHH
Q 012658 99 EGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA 178 (459)
Q Consensus 99 ~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a 178 (459)
+++.+|++++++.|++||. .|+.++..+|.++|+++++.|++|.++|++++++|+|||+.++...|+..+++.++|++
T Consensus 2 ~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~~ 79 (484)
T PLN02203 2 EAPGETLEGSVAELRETYE--SGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSANLAL 79 (484)
T ss_pred CCCHHHHHHHHHHHHHHHH--hcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4678999999999999999 99999999999999999999999999999999999999999886679999999999999
Q ss_pred HhhhhhcCc---ccCC-CCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHH
Q 012658 179 GWADKIQGL---TAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH 254 (459)
Q Consensus 179 ~~~~~~~~~---~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~ 254 (459)
...++..+. ..+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~ 159 (484)
T PLN02203 80 SNLKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIP 159 (484)
T ss_pred HHHHHHhccccccCCcccCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHH
Confidence 887776443 1221 234467889999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEcc---CCCHHHH
Q 012658 255 EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE---DADVDKA 331 (459)
Q Consensus 255 ~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~---dADld~a 331 (459)
++ +|+|+||+|+| +.+.+..|..| .+|.|.||||+++|+.|++.+++ +++|+++|+|||||+||++ |||+|.|
T Consensus 160 ~~-lP~gvv~vv~g-~~~~~~~l~~~-~vd~v~fTGS~~~G~~v~~~aa~-~l~~v~lElGGknp~iV~~d~~daDl~~a 235 (484)
T PLN02203 160 KY-LDSKAVKVIEG-GPAVGEQLLQH-KWDKIFFTGSPRVGRIIMTAAAK-HLTPVALELGGKCPCIVDSLSSSRDTKVA 235 (484)
T ss_pred Hh-CCcCEEEEEeC-CHHHHHHHHhC-CCCEEEEECCHHHHHHHHHHHHh-cCCCEEEEecCCCeEEEccCCCCCCHHHH
Confidence 96 99999999998 77889999999 59999999999999999999987 8999999999999999997 6999999
Q ss_pred HHHHHHHhhc-cCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCC
Q 012658 332 AELAHYALFF-NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGA 410 (459)
Q Consensus 332 a~~i~~~~~~-~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga 410 (459)
++.+++++|. |+||.|++++|+|||++++|+|+++|++++.++++|+|.++ +++||+++..+++++.++|++++++ +
T Consensus 236 a~~i~~~~f~~~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~p~~~-~~~Gpli~~~~~~~v~~~i~~a~~~-~ 313 (484)
T PLN02203 236 VNRIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRES-KSMARILNKKHFQRLSNLLKDPRVA-A 313 (484)
T ss_pred HHHHHHHhcccCCCCccccCCeEEEcHHHHHHHHHHHHHHHHHhcCCCCCcC-CCcCCCCCHHHHHHHHHHHHHHHhC-C
Confidence 9999999995 89999999999999999999999999999999999999986 6899999999999999999999887 6
Q ss_pred eEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 411 KLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 411 ~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++++||.. +.+|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 314 ~~~~gg~~-~~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~ 360 (484)
T PLN02203 314 SIVHGGSI-DEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKI 360 (484)
T ss_pred eEEeCCCc-CCCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCH
Confidence 89999865 346899999999999999999999999999999999985
|
|
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-71 Score=624.60 Aligned_cols=373 Identities=33% Similarity=0.481 Sum_probs=347.4
Q ss_pred ccCceecCEeeeCCCCCeeeeeCCCC-CCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHc
Q 012658 65 YTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (459)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~ 143 (459)
..+.+|+|+.. .+.+++++||.| ++++++++.++.+++++|++.|++||+ .|+.++..+|.++|+++++.|+++
T Consensus 554 ~~~~~i~g~~~---~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Av~aA~~A~~--~W~~~~~~~Ra~iL~raAdll~~~ 628 (1208)
T PRK11905 554 HAAPLLAGGDV---DGGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFP--EWSATPAAERAAILERAADLMEAH 628 (1208)
T ss_pred eecceeccccc---cCCeeeEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHh
Confidence 34567777654 366799999999 999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHH
Q 012658 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (459)
Q Consensus 144 ~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (459)
.++|+.++++|+||++.++. .|+..+++.++||+..++...+ ...++|+|||++|+|||||+.+++++
T Consensus 629 ~~eL~~l~~~E~GKt~~ea~-~Ev~eaid~lr~ya~~a~~~~~-----------~~~~~P~GVv~~IsPwNfPlai~~g~ 696 (1208)
T PRK11905 629 MPELFALAVREAGKTLANAI-AEVREAVDFLRYYAAQARRLLN-----------GPGHKPLGPVVCISPWNFPLAIFTGQ 696 (1208)
T ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcC-----------CceecCccEEEEEcCCcCHHHHHHHH
Confidence 99999999999999999975 5999999999999998776532 13578999999999999999999999
Q ss_pred HHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHH
Q 012658 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (459)
Q Consensus 224 l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a 303 (459)
+++||++||+||+|||+++|+++..++++|.++|+|+|+||+|+|++.+++..|+.|++|+.|+||||+++|+.|.+.++
T Consensus 697 i~aALaaGN~VV~KPse~tpl~a~~l~~ll~eAGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~~~A 776 (1208)
T PRK11905 697 IAAALVAGNTVLAKPAEQTPLIAARAVRLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLA 776 (1208)
T ss_pred HHHHHHcCCEEEEeCCcccHHHHHHHHHHHHHcCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999988
Q ss_pred hc--CCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCC
Q 012658 304 KS--NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381 (459)
Q Consensus 304 ~~--~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~ 381 (459)
++ ..+|+++|+|||||+||++|||+|.|++.+++++|.++||.|++++++|||++++|+|+++|+++++++++|+|.+
T Consensus 777 ~~~~~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~f~e~L~~~~~~l~vGdP~d 856 (1208)
T PRK11905 777 KRSGPPVPLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVADRVLTMLKGAMDELRIGDPWR 856 (1208)
T ss_pred hhcCCCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEehhHHHHHHHHHHHHHHHhcCCCchh
Confidence 73 2589999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccC-CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecC
Q 012658 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGE 456 (459)
Q Consensus 382 ~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~ 456 (459)
.++++||+|++++++++.++|++++++|+.++.|+.... ..|+|+.|||+. + +++.++++|+||||++|++|+
T Consensus 857 ~~t~~GPvId~~a~~~i~~~I~~a~~~G~~l~~g~~~~~~~~G~fv~PTVl~-~-~~~~~~~eEiFGPVL~V~~y~ 930 (1208)
T PRK11905 857 LSTDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETEKGTFVAPTLIE-I-DSISDLEREVFGPVLHVVRFK 930 (1208)
T ss_pred ccCCccCccCHHHHHHHHHHHHHHHHCCCEEEEccCCCCCCCCeEEeeEEEe-c-CChHHhcCCccCceEEEEEeC
Confidence 999999999999999999999999999998887764322 469999999996 3 678999999999999999997
|
|
| >TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-71 Score=581.96 Aligned_cols=361 Identities=19% Similarity=0.188 Sum_probs=320.6
Q ss_pred eeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhh
Q 012658 84 PTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163 (459)
Q Consensus 84 ~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~ 163 (459)
.-+||+||+++++++.++. +++++.|++||+ .|+++++.+|.++|++++++|+++.++|++++++|+|||+.++.
T Consensus 68 ~e~~P~t~~~~~~~~~~~~---~~av~aA~~A~~--~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~a~ 142 (551)
T TIGR02288 68 GERSPYGVELGVTYPQCDG---DALLDAAHAALP--GWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMMAF 142 (551)
T ss_pred cccCCCCCCEEEEEcCCCH---HHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHH
Confidence 3469999999999999985 899999999999 99999999999999999999999999999999999999998763
Q ss_pred h-c---chHHHHHHHHHHHHhhhhhcCccc---CCC-C---CceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCC
Q 012658 164 Q-T---EVPMTTRLFRYYAGWADKIQGLTA---PAD-G---PYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGN 232 (459)
Q Consensus 164 ~-~---ev~~~~~~l~~~a~~~~~~~~~~~---~~~-~---~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN 232 (459)
. + ++...++.++|+++...++.+... +.. . ....+..++|+|||++|+|||||+++.++++++||++||
T Consensus 143 e~gkp~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaaGN 222 (551)
T TIGR02288 143 QAGGPHAQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGN 222 (551)
T ss_pred hccChHHHHHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHcCC
Confidence 2 2 677889999999998877766533 211 1 112234789999999999999999999999999999999
Q ss_pred eEEeecCCCchHHHH----HHHHHHHHcCCCCCcEEeecCC-ChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCC
Q 012658 233 TIVLKTAEQTPLSAL----YVSKLLHEAGLPPGVLNIVSGY-GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 307 (459)
Q Consensus 233 ~VVlKps~~~p~~~~----~l~~ll~~aGlP~g~v~vv~g~-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~ 307 (459)
+||+|||+.+|+++. .+.++|.++|+|+|+||+|+|. +.++++.|+.||.|+.|.||||+++|+.|++.++ .
T Consensus 223 ~VVlKPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~G~~I~~~aa---~ 299 (551)
T TIGR02288 223 PVLVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNAR---Q 299 (551)
T ss_pred eEEEECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHHHHHHHHhcc---c
Confidence 999999999999765 5679999999999999999985 6778999999999999999999999999998875 3
Q ss_pred CceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCc---------chHHHHHHHHHHHHhhccCC
Q 012658 308 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES---------VYDQFVEKANALAMKRVVGD 378 (459)
Q Consensus 308 ~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~---------v~d~f~~~l~~~~~~~~vG~ 378 (459)
+++++|+|||||+||++|+|+|.+++.+++++|.|+||.|++++|+|||++ +||+|+++|+++++++ +|+
T Consensus 300 ~~v~lElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~def~~~L~~~~~~l-vGd 378 (551)
T TIGR02288 300 AQVYTEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDGL-LGD 378 (551)
T ss_pred CcEEeecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEeccccccccchhHHHHHHHHHHHHHHHh-cCC
Confidence 799999999999999999999999999999999999999999999999999 7999999999999999 999
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCccc---CCCC-ceEecEEEeeCCCCCCCcCcCCCcceEEEEe
Q 012658 379 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL---GAKG-YYIKPTVFTGVKVLILISPASISPNILHTFN 454 (459)
Q Consensus 379 p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~---~~~g-~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~ 454 (459)
|.++.+++||++++.+++++ ++++++| ++++||... ..+| +|++|||+....+||++++||+||||++|++
T Consensus 379 p~~~~~~~Gplis~~~~~ri----~~a~~~G-~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~ 453 (551)
T TIGR02288 379 PARATAVLGAIQSPDTLARI----AEARALG-EVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPIAFVVA 453 (551)
T ss_pred cccccccccCcCCHHHHHHH----HHHHhCC-CEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCCEEEEEE
Confidence 99999999999999999985 6677788 566666432 1135 6899999943335999999999999999999
Q ss_pred cCCC
Q 012658 455 GENF 458 (459)
Q Consensus 455 ~~~~ 458 (459)
|+|+
T Consensus 454 ~~d~ 457 (551)
T TIGR02288 454 VDDG 457 (551)
T ss_pred ECCH
Confidence 9985
|
This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. |
| >cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-71 Score=575.29 Aligned_cols=348 Identities=39% Similarity=0.600 Sum_probs=329.6
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhh
Q 012658 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 183 (459)
Q Consensus 104 dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~ 183 (459)
|++++++.|++|++ .|++++..+|.++|+++++.|+++.++|+++++.|+|||..++. .|+..+++.+++++.+.++
T Consensus 1 ~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~-~ei~~~~~~l~~~~~~~~~ 77 (431)
T cd07104 1 DVDRAYAAAAAAQK--AWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAA-FEVGAAIAILREAAGLPRR 77 (431)
T ss_pred CHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 58899999999999 99999999999999999999999999999999999999998876 4999999999999998877
Q ss_pred hcCcccCCC-CCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHH-HHHHHHHHHHcCCCCC
Q 012658 184 IQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS-ALYVSKLLHEAGLPPG 261 (459)
Q Consensus 184 ~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~-~~~l~~ll~~aGlP~g 261 (459)
..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+ +..|.++|.++|+|+|
T Consensus 78 ~~~~~~~~~~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aGlP~g 157 (431)
T cd07104 78 PEGEILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKG 157 (431)
T ss_pred hcCccccCCCCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHHHHHHHcCCCcc
Confidence 655544433 45667899999999999999999999999999999999999999999999998 6789999999999999
Q ss_pred cEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhc
Q 012658 262 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 341 (459)
Q Consensus 262 ~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~ 341 (459)
++|++++++.+.+..|..|++++.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|||+|.|++.+++++|.
T Consensus 158 vv~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~ 236 (431)
T cd07104 158 VLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGR-HLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFL 236 (431)
T ss_pred cEEEeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHh
Confidence 9999999777789999999999999999999999999999887 899999999999999999999999999999999999
Q ss_pred cCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCC
Q 012658 342 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 421 (459)
Q Consensus 342 ~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~ 421 (459)
|+||.|+++++||||++++|+|+++|++++.++++|+|.++++++||++++.+++++.+++++++++|+++++||..
T Consensus 237 ~~GQ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~~--- 313 (431)
T cd07104 237 HQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTY--- 313 (431)
T ss_pred cCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999964
Q ss_pred CCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 422 KGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 422 ~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
.|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 314 ~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~ 350 (431)
T cd07104 314 EGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDD 350 (431)
T ss_pred CCceECCEEeecCCCCChhhhCcCcCCeEEEEEECCH
Confidence 4899999999999999999999999999999999985
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. |
| >cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-71 Score=573.14 Aligned_cols=346 Identities=36% Similarity=0.548 Sum_probs=323.0
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhh
Q 012658 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 183 (459)
Q Consensus 104 dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~ 183 (459)
|++++++.|++||+ .|++++.++|.++|+++++.|+++.++|++++++|+|||..++. .|+..+++.++|++...++
T Consensus 1 ~v~~ai~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~-~ei~~~~~~l~~~~~~~~~ 77 (432)
T cd07105 1 DADQAVEAAAAAFP--AWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAG-FNVDLAAGMLREAASLITQ 77 (432)
T ss_pred CHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 57899999999999 99999999999999999999999999999999999999987764 5999999999999998877
Q ss_pred hcCcccCCC-CCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCc
Q 012658 184 IQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGV 262 (459)
Q Consensus 184 ~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~ 262 (459)
..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~aGlP~gv 157 (432)
T cd07105 78 IIGGSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGV 157 (432)
T ss_pred hcCeecccCCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHcCcCCCc
Confidence 644444422 3445688999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCC---ChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHh
Q 012658 263 LNIVSGY---GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYAL 339 (459)
Q Consensus 263 v~vv~g~---~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~ 339 (459)
+|+++|+ +.+++..|..|++++.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|||+|.|++.+++++
T Consensus 158 ~~~v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~-~~~~~~lElgGk~p~iV~~dadl~~aa~~i~~~~ 236 (432)
T cd07105 158 LNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAK-HLKPVLLELGGKAPAIVLEDADLDAAANAALFGA 236 (432)
T ss_pred EEEEeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeEEEeCCCCCceEECCCCCHHHHHHHHHHHH
Confidence 9999984 34578999999999999999999999999999887 8999999999999999999999999999999999
Q ss_pred hccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCccc
Q 012658 340 FFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 419 (459)
Q Consensus 340 ~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~ 419 (459)
|.|+||.|+++++||||+++||+|+++|++++.++++| ++++||++++.+++++.++|++++++|+++++||...
T Consensus 237 ~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g-----~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~ 311 (432)
T cd07105 237 FLNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAG-----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLAD 311 (432)
T ss_pred HhcCCCCCcCCceEEEcHHHHHHHHHHHHHHHHhhcCC-----CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcC
Confidence 99999999999999999999999999999999999998 5789999999999999999999999999999999764
Q ss_pred C-CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 420 G-AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 420 ~-~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
. ..|+|++|||+.+++++|.+++||+||||++|++|+|+
T Consensus 312 ~~~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~ 351 (432)
T cd07105 312 ESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDE 351 (432)
T ss_pred CCCCCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCH
Confidence 2 35899999999999999999999999999999999985
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. |
| >PRK10090 aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-71 Score=567.16 Aligned_cols=324 Identities=34% Similarity=0.579 Sum_probs=306.2
Q ss_pred HHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCC-CCceEEEEEccceEEEEEc
Q 012658 133 ILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQII 211 (459)
Q Consensus 133 L~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~ 211 (459)
|+++++.|++|+++|++++++|+|||+.++. .|+..+++.++||+.+++...+...+.. .+...+.+++|+|||++|+
T Consensus 1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~ 79 (409)
T PRK10090 1 LRKIAAGIRERASEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGIL 79 (409)
T ss_pred CHHHHHHHHHCHHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccCCCCCCceeEEEEecccEEEEEC
Confidence 5789999999999999999999999999986 5999999999999999888766543322 2446788999999999999
Q ss_pred CCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCC
Q 012658 212 PWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGS 291 (459)
Q Consensus 212 p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs 291 (459)
|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|++.+.+..|..|++++.|.||||
T Consensus 80 p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~V~ftGs 159 (409)
T PRK10090 80 PWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGS 159 (409)
T ss_pred CCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCCCcccEEEEeCCChhHHHHHhcCCCcCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999977888999999999999999999
Q ss_pred hHHHHHHHHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHH
Q 012658 292 TTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALA 371 (459)
Q Consensus 292 ~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~ 371 (459)
+.+|+.|++.+++ +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++
T Consensus 160 ~~~g~~v~~~aa~-~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~ 238 (409)
T PRK10090 160 VSAGEKIMAAAAK-NITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAM 238 (409)
T ss_pred HHHHHHHHHHHHh-cCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEcHHHHHHHHHHHHHHH
Confidence 9999999999887 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccCCCCCC-CCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceE
Q 012658 372 MKRVVGDPFKG-GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNIL 450 (459)
Q Consensus 372 ~~~~vG~p~~~-~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl 450 (459)
+++++|+|+++ ++++||++++.+++++.++|++++++|+++++||......|+|++|||+.+++++|++++||+||||+
T Consensus 239 ~~~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl 318 (409)
T PRK10090 239 QAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVL 318 (409)
T ss_pred HhcCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEecEEEeCCCCCCHHHhCCCCCceE
Confidence 99999999998 99999999999999999999999999999999997655568999999999999999999999999999
Q ss_pred EEEecCCC
Q 012658 451 HTFNGENF 458 (459)
Q Consensus 451 ~v~~~~~~ 458 (459)
+|++|+|+
T Consensus 319 ~v~~~~~~ 326 (409)
T PRK10090 319 PVVAFDTL 326 (409)
T ss_pred EEEEECCH
Confidence 99999984
|
|
| >PTZ00381 aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-70 Score=574.23 Aligned_cols=349 Identities=28% Similarity=0.398 Sum_probs=322.2
Q ss_pred cCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHH
Q 012658 99 EGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA 178 (459)
Q Consensus 99 ~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a 178 (459)
..+.+|++++++.|+++|. .|+.++..+|.++|+++++.|++|.++|++++++|+|||..++...|+..++..+++++
T Consensus 3 ~~~~~~i~~av~~a~~a~~--~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~~~~ 80 (493)
T PTZ00381 3 PDNPEIIPPIVKKLKESFL--TGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLL 80 (493)
T ss_pred CCCHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4688999999999999999 99999999999999999999999999999999999999999887779999999999998
Q ss_pred HhhhhhcCcc-cC---CCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHH
Q 012658 179 GWADKIQGLT-AP---ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH 254 (459)
Q Consensus 179 ~~~~~~~~~~-~~---~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~ 254 (459)
...++..... .. ...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~ 160 (493)
T PTZ00381 81 KHLDEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLT 160 (493)
T ss_pred HHHHHHhCCcccCCccccCCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHH
Confidence 8776653322 11 1123457889999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHH
Q 012658 255 EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAEL 334 (459)
Q Consensus 255 ~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~ 334 (459)
++ +|+|++++++| +.+.+..|..|+ +|.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|||+|.|++.
T Consensus 161 ~~-lp~~~v~vv~g-~~~~~~~l~~~~-~d~i~FTGS~~vG~~V~~~aa~-~l~pv~lElGGk~p~iV~~dAdl~~Aa~~ 236 (493)
T PTZ00381 161 KY-LDPSYVRVIEG-GVEVTTELLKEP-FDHIFFTGSPRVGKLVMQAAAE-NLTPCTLELGGKSPVIVDKSCNLKVAARR 236 (493)
T ss_pred Hh-CCcCEEEEecC-CHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHh-cCCcEEEEcCCCCceEEcCCCCHHHHHHH
Confidence 96 99999999998 677888899887 9999999999999999999887 89999999999999999999999999999
Q ss_pred HHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEe
Q 012658 335 AHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLET 414 (459)
Q Consensus 335 i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~ 414 (459)
+++++|.|+||.|++++++|||++++|+|+++|+++++++. |+|.++++++||+++..+++++.++|+ ++|+++++
T Consensus 237 i~~g~~~naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~ri~~~i~---~~ga~~~~ 312 (493)
T PTZ00381 237 IAWGKFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFF-GEDPKKSEDYSRIVNEFHTKRLAELIK---DHGGKVVY 312 (493)
T ss_pred HHHHHHhhcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHHHh-CCCCccCCCcCCCCCHHHHHHHHHHHH---hCCCcEEE
Confidence 99999999999999999999999999999999999999986 666678899999999999999999996 36999999
Q ss_pred CCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 415 GGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 415 gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
||.. +..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 313 gG~~-~~~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 355 (493)
T PTZ00381 313 GGEV-DIENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENI 355 (493)
T ss_pred CCCc-CCCCCeEeeEEEecCCCCChHHhccccCCeEEEEeeCCH
Confidence 9975 346899999999999999999999999999999999985
|
|
| >cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-70 Score=565.40 Aligned_cols=343 Identities=29% Similarity=0.405 Sum_probs=317.0
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcC
Q 012658 107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186 (459)
Q Consensus 107 ~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~ 186 (459)
++++.|++||. .|+.++..+|.++|+++++.|++++++|++++++|+|||+.++...|+..+++.++||+....+..+
T Consensus 3 ~a~~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~ 80 (432)
T cd07137 3 RLVRELRETFR--SGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKWMA 80 (432)
T ss_pred HHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 48899999999 9999999999999999999999999999999999999999887656999999999999988766443
Q ss_pred cc---cCC-CCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCc
Q 012658 187 LT---APA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGV 262 (459)
Q Consensus 187 ~~---~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~ 262 (459)
.. .+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..++++|.++ +|+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~~-~P~gv 159 (432)
T cd07137 81 PEKVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPEY-LDTKA 159 (432)
T ss_pred CcccCCCcccCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCe
Confidence 21 121 12335678999999999999999999999999999999999999999999999999999999995 99999
Q ss_pred EEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhh-c
Q 012658 263 LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF-F 341 (459)
Q Consensus 263 v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~-~ 341 (459)
+|+++| +.+.+..|+.| +++.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|||+|.|++.+++++| .
T Consensus 160 v~~v~g-~~~~~~~L~~~-~i~~v~fTGs~~~g~~v~~~aa~-~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f~~ 236 (432)
T cd07137 160 IKVIEG-GVPETTALLEQ-KWDKIFFTGSPRVGRIIMAAAAK-HLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGC 236 (432)
T ss_pred EEEEeC-CHHHHHHHHhC-CCCEEEEECChHHHHHHHHHHHh-cCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhhhc
Confidence 999999 56678889887 69999999999999999999887 89999999999999999999999999999999999 5
Q ss_pred cCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCC
Q 012658 342 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 421 (459)
Q Consensus 342 ~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~ 421 (459)
|+||.|++++|+|||++++|+|+++|++++.++++|+| ++++++||++++.+++++.++|+++++ |+++++||... .
T Consensus 237 ~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~v~~~i~~a~~-ga~~l~gg~~~-~ 313 (432)
T cd07137 237 NNGQACIAPDYVLVEESFAPTLIDALKNTLEKFFGENP-KESKDLSRIVNSHHFQRLSRLLDDPSV-ADKIVHGGERD-E 313 (432)
T ss_pred cCCCcccCCCEEEEcHHHHHHHHHHHHHHHHHHhCCCC-CccCCcCCcCCHHHHHHHHHHHHHHHh-CCeEEeCCCcC-C
Confidence 99999999999999999999999999999999999999 468999999999999999999999988 89999999653 3
Q ss_pred CCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 422 KGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 422 ~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
.|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 314 ~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 350 (432)
T cd07137 314 KNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKI 350 (432)
T ss_pred CCCEEeeEEEecCCCcchhhhcccccCceEEEEeCCH
Confidence 6899999999999999999999999999999999985
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. |
| >cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-70 Score=567.84 Aligned_cols=339 Identities=30% Similarity=0.411 Sum_probs=314.4
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcC
Q 012658 107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186 (459)
Q Consensus 107 ~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~ 186 (459)
+.++.|++||+ .|++++..+|.++|++++++|++|.++|++++++|+|||+.++...|+..+++.++|++..++...+
T Consensus 2 ~~v~~a~~a~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~ 79 (449)
T cd07136 2 SLVEKQRAFFK--TGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMK 79 (449)
T ss_pred hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 46789999999 9999999999999999999999999999999999999999998767999999999999998877654
Q ss_pred c-ccCCC---CCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCc
Q 012658 187 L-TAPAD---GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGV 262 (459)
Q Consensus 187 ~-~~~~~---~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~ 262 (459)
. ..+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++ +|+|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~a-lP~gv 158 (449)
T cd07136 80 PKRVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEET-FDEEY 158 (449)
T ss_pred CCccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHHh-CCCCE
Confidence 3 22211 2446788999999999999999999999999999999999999999999999999999999998 99999
Q ss_pred EEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhcc
Q 012658 263 LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 342 (459)
Q Consensus 263 v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~ 342 (459)
+|+|+| +.+.+..|+.|+ |+.|.||||+++|+.|++.+++ +++|+++|+|||||+||++|||+|.|++.+++++|.|
T Consensus 159 ~~~v~g-~~~~~~~L~~~~-v~~V~fTGS~~~g~~i~~~aa~-~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~~~ 235 (449)
T cd07136 159 VAVVEG-GVEENQELLDQK-FDYIFFTGSVRVGKIVMEAAAK-HLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLN 235 (449)
T ss_pred EEEEeC-ChHHHHHHhcCC-CCEEEEECCHHHHHHHHHHHHh-cCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHHcc
Confidence 999998 556788888765 9999999999999999999887 7899999999999999999999999999999999999
Q ss_pred CCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCC
Q 012658 343 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 422 (459)
Q Consensus 343 ~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~ 422 (459)
+||.|++++|+|||+++||+|+++|+++++++++|+|.+ ++++||++++.+++++.++|+++ ++++||... ..
T Consensus 236 ~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~g~p~~-~~~~gpli~~~~~~~i~~~i~~a-----~~~~gG~~~-~~ 308 (449)
T cd07136 236 AGQTCVAPDYVLVHESVKEKFIKELKEEIKKFYGEDPLE-SPDYGRIINEKHFDRLAGLLDNG-----KIVFGGNTD-RE 308 (449)
T ss_pred cCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCCCCC-CCCccCcCCHHHHHHHHHHHhcc-----eEEECCCcC-CC
Confidence 999999999999999999999999999999999999997 89999999999999999999873 899999753 35
Q ss_pred CceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 423 GYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 423 g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
|+|++|||+.+++++|.+++||+||||++|++|+|+
T Consensus 309 g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~ 344 (449)
T cd07136 309 TLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTL 344 (449)
T ss_pred CCEEeeEEEecCCCcChHHhccccCCeeEEEEeCCH
Confidence 899999999999999999999999999999999985
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. |
| >cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-70 Score=571.20 Aligned_cols=368 Identities=19% Similarity=0.172 Sum_probs=328.8
Q ss_pred CCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcC
Q 012658 77 SASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNG 156 (459)
Q Consensus 77 ~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~G 156 (459)
..+|...+++||+|++++++++.+ |++++|+.|++|++ .|+++++.+|.++|++++++|++++++|++++++|+|
T Consensus 61 ~~~~~~~~~~~P~~~~l~~~~~~a---dv~~ai~aA~~A~~--~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~G 135 (549)
T cd07127 61 GASGWVGGEVSPYGVELGVTYPQC---DPDALLAAARAAMP--GWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTG 135 (549)
T ss_pred CCCCCeeeeECCCCCcEEEEEchH---HHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHC
Confidence 346788999999999999999987 99999999999999 9999999999999999999999999999999999999
Q ss_pred CChhhhhh----cchHHHHHHHHHHHHhhhhhcCcccCC-C------CCceEEEEEccceEEEEEcCCCchHHhhHHHHH
Q 012658 157 KPFEQSAQ----TEVPMTTRLFRYYAGWADKIQGLTAPA-D------GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225 (459)
Q Consensus 157 kp~~~a~~----~ev~~~~~~l~~~a~~~~~~~~~~~~~-~------~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 225 (459)
|++.++.. .|+..+++.++|+++....+.+...+. . ........++|+||+++|+|||||++..+.+++
T Consensus 136 k~~~~a~qa~~~~evd~a~e~~~~a~~~~~~~~~~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~ 215 (549)
T cd07127 136 QAFMMAFQAGGPHAQDRGLEAVAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVIGCSTFPTWNGYPGLF 215 (549)
T ss_pred CCHHHHHhcccHHHHHHHHHHHHHHHHHHHhccccccccCCCCCcccccccceeEEecccEEEEEeCcCChHHHHHHHHH
Confidence 99877653 179999999999999887765443210 0 011224478999999999999999999999999
Q ss_pred HHHhcCCeEEeecCCCchHHHH----HHHHHHHHcCCCCCcEEeecCC-ChhHHHHHHcCCCccEEEeeCChHHHHHHHH
Q 012658 226 PALACGNTIVLKTAEQTPLSAL----YVSKLLHEAGLPPGVLNIVSGY-GPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (459)
Q Consensus 226 ~ALaaGN~VVlKps~~~p~~~~----~l~~ll~~aGlP~g~v~vv~g~-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 300 (459)
+||++||+||+|||+.+|+++. .+.++|.++|+|+|+||+|++. +.+.+..|+.||.|+.|.||||+.+|+.|++
T Consensus 216 ~ALaaGN~VVvKPs~~a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~ 295 (549)
T cd07127 216 ASLATGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEA 295 (549)
T ss_pred HHHhcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHH
Confidence 9999999999999999998864 4668999999999999999985 4678999999999999999999999999999
Q ss_pred HHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCc---------chHHHHHHHHHHH
Q 012658 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES---------VYDQFVEKANALA 371 (459)
Q Consensus 301 ~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~---------v~d~f~~~l~~~~ 371 (459)
.++. +|+++|+|||||+||++|+|++.+++.+++++|.|+||.|++++|+|||++ +||+|+++|++++
T Consensus 296 ~a~~---~~v~~ElGGkn~~IV~~dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~~ 372 (549)
T cd07127 296 NARQ---AQVYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAI 372 (549)
T ss_pred Hhcc---CcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHccCCCCCCCCCEEEEECCccccccchhHHHHHHHHHHHHH
Confidence 8863 799999999999999999999999999999999999999999999999999 8999999999999
Q ss_pred HhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCccc---CCCC-ceEecEEEeeCCCCCCCcCcCCCc
Q 012658 372 MKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL---GAKG-YYIKPTVFTGVKVLILISPASISP 447 (459)
Q Consensus 372 ~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~---~~~g-~~~~PTvl~~v~~~~~i~~~Eifg 447 (459)
+++ +|+|.+..+++||++++.+++++.+ +++.|+ +++||... +..| +|++|||+.+++++|++++||+||
T Consensus 373 ~~l-~Gdp~~~~~~~Gpli~~~~~~ri~~----a~~~g~-vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FG 446 (549)
T cd07127 373 DGL-LADPARAAALLGAIQSPDTLARIAE----ARQLGE-VLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFG 446 (549)
T ss_pred HHh-cCCccccccccCCcCCHHHHHHHHH----HHhCCC-EEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcC
Confidence 999 9999999999999999999999754 556676 77787643 1235 466999999888999999999999
Q ss_pred ceEEEEecCCC
Q 012658 448 NILHTFNGENF 458 (459)
Q Consensus 448 Pvl~v~~~~~~ 458 (459)
||++|++|+|.
T Consensus 447 PVl~V~~~~d~ 457 (549)
T cd07127 447 PIAFVVATDST 457 (549)
T ss_pred ceEEEEEeCCH
Confidence 99999999984
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. |
| >cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-69 Score=559.43 Aligned_cols=343 Identities=28% Similarity=0.374 Sum_probs=315.1
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCC-hhhhhhcchHHHHHHHHHHHHhhhhhcC
Q 012658 108 AVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKP-FEQSAQTEVPMTTRLFRYYAGWADKIQG 186 (459)
Q Consensus 108 av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp-~~~a~~~ev~~~~~~l~~~a~~~~~~~~ 186 (459)
.++.|++||. .|++++..+|.++|+++++.|++|.++|++++++|+||+ ..++...|+..+++.++|++..+.+..+
T Consensus 3 ~~~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~~~~~ 80 (434)
T cd07133 3 LLERQKAAFL--ANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKKWMK 80 (434)
T ss_pred HHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4678999999 999999999999999999999999999999999999985 5666566999999999999988776543
Q ss_pred ccc-CC---CCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCc
Q 012658 187 LTA-PA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGV 262 (459)
Q Consensus 187 ~~~-~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~ 262 (459)
... +. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.++ +|+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~a-lP~g~ 159 (434)
T cd07133 81 PSRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEY-FDEDE 159 (434)
T ss_pred CcccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCe
Confidence 321 11 12445688999999999999999999999999999999999999999999999999999999997 99999
Q ss_pred EEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhcc
Q 012658 263 LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 342 (459)
Q Consensus 263 v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~ 342 (459)
||+++| +.+.+..|..|+ +|.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|||+|.|++.+++++|.|
T Consensus 160 ~~~v~g-~~~~~~~l~~~~-v~~V~ftGs~~~g~~v~~~aa~-~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~~~ 236 (434)
T cd07133 160 VAVVTG-GADVAAAFSSLP-FDHLLFTGSTAVGRHVMRAAAE-NLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLN 236 (434)
T ss_pred EEEEeC-ChHHHHHHHhCC-CCEEEEeCchHHHHHHHHHHHh-cCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHhcc
Confidence 999998 556788888765 9999999999999999999887 8999999999999999999999999999999999999
Q ss_pred CCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccC--
Q 012658 343 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-- 420 (459)
Q Consensus 343 ~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~-- 420 (459)
+||.|+++++||||++++|+|+++|+++++++++|+ ++++++||++++.+++++.++|++++++|+++++||....
T Consensus 237 ~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~--~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~ 314 (434)
T cd07133 237 AGQTCVAPDYVLVPEDKLEEFVAAAKAAVAKMYPTL--ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDF 314 (434)
T ss_pred CCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCC--CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCcCC
Confidence 999999999999999999999999999999999986 4778999999999999999999999999999999986532
Q ss_pred CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 421 AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 421 ~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
.+|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 315 ~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~ 352 (434)
T cd07133 315 AATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSL 352 (434)
T ss_pred CCCcEEeeEEEeCCCCCCcccccccCCCeeEEEEeCCH
Confidence 46899999999999999999999999999999999985
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. |
| >cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-69 Score=557.01 Aligned_cols=345 Identities=32% Similarity=0.382 Sum_probs=320.5
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcC
Q 012658 107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186 (459)
Q Consensus 107 ~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~ 186 (459)
++++.|++||. .|++++..+|.++|+++++.|+++.++|++++++|+|||+.++...|+..+++.+++++.......+
T Consensus 2 ~~~~~a~~a~~--~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~ 79 (433)
T cd07134 2 RVFAAQQAHAL--ALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKWMK 79 (433)
T ss_pred hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 57889999999 9999999999999999999999999999999999999999887657999999999999987665433
Q ss_pred c-ccCC---CCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCc
Q 012658 187 L-TAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGV 262 (459)
Q Consensus 187 ~-~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~ 262 (459)
. ..+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++ +|+|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~a-~p~g~ 158 (433)
T cd07134 80 PKRVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREA-FDEDE 158 (433)
T ss_pred CcccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCE
Confidence 2 1211 12446789999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred EEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhcc
Q 012658 263 LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 342 (459)
Q Consensus 263 v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~ 342 (459)
+++++| +.+.+..|+.|+ ++.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.+
T Consensus 159 v~~v~g-~~~~~~~l~~~~-v~~v~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~~~ 235 (433)
T cd07134 159 VAVFEG-DAEVAQALLELP-FDHIFFTGSPAVGKIVMAAAAK-HLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLN 235 (433)
T ss_pred EEEEeC-ChhHHHHHHhCC-CCEEEEECChHHHHHHHHHHHh-cCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhhcC
Confidence 999998 557888999997 9999999999999999999887 7899999999999999999999999999999999999
Q ss_pred CCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCC-CCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCC
Q 012658 343 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP-FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 421 (459)
Q Consensus 343 ~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p-~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~ 421 (459)
+||.|++++++|||++++|+|+++|+++++.++.|+| .+.++++||++++.+++++.++|++++++|+++++||... .
T Consensus 236 ~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~-~ 314 (433)
T cd07134 236 AGQTCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFD-A 314 (433)
T ss_pred cCCcccCCcEEEECHHHHHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCcC-C
Confidence 9999999999999999999999999999999988887 8899999999999999999999999999999999999753 3
Q ss_pred CCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 422 KGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 422 ~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
.|+|++|||+.++++||++++||+||||++|++|+|+
T Consensus 315 ~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 351 (433)
T cd07134 315 AQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDL 351 (433)
T ss_pred CCCEEeeEEEeCCCCccHHHhccccCceEEEEEeCCH
Confidence 5899999999999999999999999999999999985
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. |
| >cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-67 Score=547.00 Aligned_cols=339 Identities=31% Similarity=0.388 Sum_probs=310.7
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcC
Q 012658 107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186 (459)
Q Consensus 107 ~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~ 186 (459)
++++.|++||. .|+.++..+|.++|+++++.|++|.++|++++++|+|||+.++...|+..+++.+++++..+++...
T Consensus 2 ~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~ 79 (443)
T cd07132 2 EAVRRAREAFS--SGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPEWMK 79 (443)
T ss_pred hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 58899999999 9999999999999999999999999999999999999999988767999999999999988777643
Q ss_pred cccCC----CCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCc
Q 012658 187 LTAPA----DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGV 262 (459)
Q Consensus 187 ~~~~~----~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~ 262 (459)
...+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.++ +|+|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~-lp~gv 158 (443)
T cd07132 80 PEPVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKY-LDKEC 158 (443)
T ss_pred CccCCCccccCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCe
Confidence 32211 12345788999999999999999999999999999999999999999999999999999999985 99999
Q ss_pred EEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhcc
Q 012658 263 LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 342 (459)
Q Consensus 263 v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~ 342 (459)
+|+++|++. .+..|.. ++||.|.||||+.+|+.|.+.+++ +++|+++|+|||||+||++|||+|.|++.+++++|.|
T Consensus 159 ~~vv~g~~~-~~~~l~~-~~vd~V~fTGs~~~g~~i~~~a~~-~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f~~ 235 (443)
T cd07132 159 YPVVLGGVE-ETTELLK-QRFDYIFYTGSTSVGKIVMQAAAK-HLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFIN 235 (443)
T ss_pred EEEEeCCHH-HHHHHHh-CCCCEEEEECChHHHHHHHHHHHh-hCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhc
Confidence 999999544 4566775 589999999999999999998887 8899999999999999999999999999999999999
Q ss_pred CCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCC
Q 012658 343 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 422 (459)
Q Consensus 343 ~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~ 422 (459)
+||.|++++|+|||++++|+|+++|++++++++.|+| ++.+++||++++.+++++.++|++ +++++||... ..
T Consensus 236 ~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~v~~~i~~-----a~~~~gg~~~-~~ 308 (443)
T cd07132 236 AGQTCIAPDYVLCTPEVQEKFVEALKKTLKEFYGEDP-KESPDYGRIINDRHFQRLKKLLSG-----GKVAIGGQTD-EK 308 (443)
T ss_pred CCCceeCCcEEEEcHHHHHHHHHHHHHHHHHhcCCCC-CcccccCCcCCHHHHHHHHHHHhC-----CEEEeCCccC-CC
Confidence 9999999999999999999999999999999999988 788999999999999999999874 4899998653 35
Q ss_pred CceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 423 GYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 423 g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 309 ~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~ 344 (443)
T cd07132 309 ERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNL 344 (443)
T ss_pred CCEEeeEEEeCCCCCChHHhccccCceeEEEEeCCH
Confidence 899999999999999999999999999999999985
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. |
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-68 Score=529.70 Aligned_cols=396 Identities=31% Similarity=0.443 Sum_probs=361.3
Q ss_pred hhhhcccccccccccccCCCCCCCCCCCccCceecCEeeeCCCCCeeeeeCCCC-CCEEEEEecCCHHHHHHHHHHHHHh
Q 012658 37 AAASCGYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKA 115 (459)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~dv~~av~~A~~A 115 (459)
++|++|+++++++.. ....+.++....++|+.+. .|+..+++||.+ .++++++.+++.+|+++|++.|..+
T Consensus 91 lsne~~la~L~~al~------~~a~~~w~A~p~~~~~~~~--~g~~~pV~nPad~~dvVG~V~ea~~~~v~~A~~~A~~a 162 (769)
T COG4230 91 LSNEHRLASLSSALL------ASAGQKWQAAPIVNGAPVA--GGEPRPVINPADPDDIVGTVTEATEADVEQALEAAVAA 162 (769)
T ss_pred cchHHHHHHHHHHHH------hhhhhhhccccccCCCcCC--CCCcccccCCCCHhHCeeeeeecCHHHHHHHHHHHHhh
Confidence 568999999988842 3445567778899998775 688899999998 6788999999999999999999999
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCc
Q 012658 116 FDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPY 195 (459)
Q Consensus 116 ~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~ 195 (459)
++ .|..+|+.+|+.+|+|++++++.+..+|..++++|.||++..+.. |+.+++++||||+.+++.-.++
T Consensus 163 ~p--~W~atp~~eRAaiL~raAdlme~~m~~L~~L~~REAGKtl~naIA-EVREAVDFlrYYA~~ar~~~g~-------- 231 (769)
T COG4230 163 AP--IWSATPPAERAAILERAADLMEAQMPQLMGLLVREAGKTLSNAIA-EVREAVDFLRYYAGQARDTFGN-------- 231 (769)
T ss_pred Cc--ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHH-HHHHHHHHHHHHHHHHhcccCc--------
Confidence 99 999999999999999999999999999999999999999998764 9999999999999988753321
Q ss_pred eEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHH
Q 012658 196 HVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGA 275 (459)
Q Consensus 196 ~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~ 275 (459)
..++|+|+++||+|||||+.++..+++.||++||+|+-||.++||+.+..-+++|.|+|+|++++|+++|+|.++|.
T Consensus 232 ---~~~~~~G~vVcISPWNFPLAIFtGqiaAAL~aGN~VlAKPAEqTpLIAa~aV~ll~eAGvP~~~lqLLpG~G~tvGa 308 (769)
T COG4230 232 ---LTHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQLLPGRGETVGA 308 (769)
T ss_pred ---cccCCCCcEEEECCCCchHHHHHhHHHHHHHcCCccccCccccccHHHHHHHHHHHHcCCChhhHHhcCCCCcccch
Confidence 34789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCccEEEeeCChHHHHHHHHHHHhcC--CCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCcee
Q 012658 276 ALASHMEVDKLAFTGSTTTGKIVLQLAAKSN--LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRT 353 (459)
Q Consensus 276 ~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~--~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v 353 (459)
.|..+++++.|+|||||++++.|.++.+++. ..|++.|.||.|.+||+.+|--++.+..++.|+|..+||.|.+...+
T Consensus 309 ~L~~darv~GV~FTGSTevA~li~~~LA~r~g~~~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRvL 388 (769)
T COG4230 309 ALTADARVAGVMFTGSTEVARLIQRQLAKRQGRPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVL 388 (769)
T ss_pred hhhcCcccceEEEeCcHHHHHHHHHHHhhcCCCCCceEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhhh
Confidence 9999999999999999999999999998754 46899999999999999999999999999999999999999999999
Q ss_pred EeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccC-CCCceEecEEEe
Q 012658 354 FVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFT 432 (459)
Q Consensus 354 ~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~PTvl~ 432 (459)
++++++.|..+++|+-++.++++|+|..-.+|+||+|+.+....++++|+..+.+|-.+..-....+ .+|.|+.||+|.
T Consensus 389 clQ~DvAd~~l~mLKGAm~el~~G~p~~l~tDVGPVIdaEAk~~i~~Hi~~mr~~gr~v~q~~~~~~~q~GtFv~Ptl~E 468 (769)
T COG4230 389 CLQEDVADRILTMLKGAMAELRVGNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIE 468 (769)
T ss_pred hhhhhHHHHHHHHHHHHHHHhccCCccceeccccccccHHHHHHHHHHHHHHHhcccchhhccCCCccCCceeeCceeEE
Confidence 9999999999999999999999999999999999999999999999999999988865554332212 479999999996
Q ss_pred eCCCCCCCcCcCCCcceEEEEecC
Q 012658 433 GVKVLILISPASISPNILHTFNGE 456 (459)
Q Consensus 433 ~v~~~~~i~~~EifgPvl~v~~~~ 456 (459)
- ++..-++.|+|||||.|+||.
T Consensus 469 l--~~~~eL~rEVFGPVLHVvRy~ 490 (769)
T COG4230 469 L--ENLDELQREVFGPVLHVVRYK 490 (769)
T ss_pred c--CCHHHHHHHhccceeEEEEec
Confidence 5 344566899999999999996
|
|
| >KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-68 Score=519.72 Aligned_cols=370 Identities=39% Similarity=0.728 Sum_probs=350.2
Q ss_pred CceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 012658 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (459)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~ 146 (459)
.+||+|+|+++.+++|++.+||.|+.+|++++.++..|+++|+.+|+.||+.|+|.+++..+|.+.|.++++++++|+++
T Consensus 423 ~~fi~g~fv~~~~~~t~~tinp~~~~~ic~~~la~v~dvd~av~aak~afe~g~w~~~sar~rg~~~y~la~lme~h~ee 502 (881)
T KOG2452|consen 423 QLFIGGEFVDAEGAKTSETINPTDGSVICQVSLAQVTDVDKAVAAAKGAFENGRWGKISARDRGRLMYRLADLMEQHQEE 502 (881)
T ss_pred hhccCcEeecccCCccccccCCCCCCeeEEeehhHhhhHHHHHHHHhhhhhcCcccccchhhhhhhhhhccchhhhccch
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCC----CCceEEEEEccceEEEEEcCCCchHHhhHH
Q 012658 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (459)
Q Consensus 147 l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (459)
|+.+.++|.|--...+....+...++.+|||++|.+++.+.++|.. ......+.++|+|||++|.|||||+.++.|
T Consensus 503 lat~e~ldagavytlalkthvgmsi~~~ryfagwcdkiqg~tipi~~arpn~nl~lt~~epigv~g~i~pwnyplmmlsw 582 (881)
T KOG2452|consen 503 LATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLSW 582 (881)
T ss_pred hhhhhhccccceeeeeehhhcCceehHHHHhhhhhhhccCceeccccCCCCCcceeeecCcceeEEEeccCCchHHHHHH
Confidence 9999999999887777888899999999999999999999998843 345667899999999999999999999999
Q ss_pred HHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHH
Q 012658 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (459)
Q Consensus 223 ~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~ 302 (459)
+.+.+|++- ++ .+++ - .|++|+++|.|+-++..|..||+|++|-||||+++|+.|++.|
T Consensus 583 k~aaclaa~---~~-----------k~~e---~----sgvini~~gsgslvg~rls~hpdvrkigftgsteig~~im~sc 641 (881)
T KOG2452|consen 583 KTAACLAAQ---VL-----------KFAE---L----TGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 641 (881)
T ss_pred HHHHHHHHH---Hh-----------hhhh---h----cceEEEecCCcchhccccccCCccceeccccchHHHHHHHHHH
Confidence 999998642 11 1221 1 4889999999999999999999999999999999999999999
Q ss_pred HhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCC
Q 012658 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 382 (459)
Q Consensus 303 a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~ 382 (459)
+.++.|+|.+|+||++|+||+.|+|+++|++....+.|++.|..|++..|+||.+++.|+|+.++.++++++++|+|+|.
T Consensus 642 a~snikkvslelgg~sp~iifad~dl~kav~~~~~~vff~kgenciaagr~fi~~sihd~fv~~~vee~~~~~ig~pldr 721 (881)
T KOG2452|consen 642 AISNVKKVSLELGGESPFIIFADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSIHDEFVRRVVEEVRKMKVGNPLDR 721 (881)
T ss_pred hhcchheeeeeccCCCceEEEecCcHHHHHHhhccceeecCCcchhhhcceeehhhhhHHHHHHHHHHHHhhccCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCC
Q 012658 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGEN 457 (459)
Q Consensus 383 ~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~ 457 (459)
+++.||+-...+..++..|++.+++.||++.+||++.+..|.|++|||++++.+.|-+..||-||||+.|-+++|
T Consensus 722 ~t~hgpqnh~ahl~kl~ey~~~~v~~ga~~~~gg~~~~r~g~~f~pti~s~i~d~~f~a~eesfgpim~is~f~d 796 (881)
T KOG2452|consen 722 DTDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFAD 796 (881)
T ss_pred cccCCchhHHHHHHHHHHHHHHHhccCcEEEECCccCCCCCcccCCeeecccchhhhhhhccccCceEEEEecCC
Confidence 999999999999999999999999999999999999888999999999999999999999999999999999876
|
|
| >cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-66 Score=539.18 Aligned_cols=339 Identities=31% Similarity=0.429 Sum_probs=311.3
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcC
Q 012658 107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186 (459)
Q Consensus 107 ~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~ 186 (459)
.+++.|++||. .|+.+|..+|.++|++++++|+++.++|++++++|+|||+.++...|+..+++.+++++...+...+
T Consensus 2 ~~v~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~~~~ 79 (426)
T cd07087 2 ELVARLRETFL--TGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMK 79 (426)
T ss_pred hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 37899999999 9999999999999999999999999999999999999998777666999999999999988776543
Q ss_pred cc-c--CC-CCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCc
Q 012658 187 LT-A--PA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGV 262 (459)
Q Consensus 187 ~~-~--~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~ 262 (459)
.. . +. ..+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..++++|.+ |+|+|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~-~~P~gv 158 (426)
T cd07087 80 PRRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPK-YFDPEA 158 (426)
T ss_pred CcccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH-hCCCCE
Confidence 22 1 11 1234578899999999999999999999999999999999999999999999999999999999 699999
Q ss_pred EEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhcc
Q 012658 263 LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 342 (459)
Q Consensus 263 v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~ 342 (459)
+|+++|+ .+.+..|+.|+ ++.|.||||+++|+.|.+.+++ +++|+++|+|||||+||++|||+|.|++.+++++|.|
T Consensus 159 ~~vv~g~-~~~~~~l~~~~-v~~V~ftGs~~~g~~i~~~a~~-~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~ 235 (426)
T cd07087 159 VAVVEGG-VEVATALLAEP-FDHIFFTGSPAVGKIVMEAAAK-HLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLN 235 (426)
T ss_pred EEEEeCC-chHHHHHHhCC-CCEEEEeCChHHHHHHHHHHHh-hCCceEEeccCCCceEecCCCCHHHHHHHHHHHHHhc
Confidence 9999984 46688999998 9999999999999999999887 7899999999999999999999999999999999999
Q ss_pred CCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCC
Q 012658 343 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 422 (459)
Q Consensus 343 ~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~ 422 (459)
+||.|+++++||||++++|+|+++|++++++++.|+| ++.+++||++++.+++++.++++++ ++++||... ..
T Consensus 236 ~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~~~~-~~~~~~gpli~~~~~~~~~~~i~~a-----~v~~gg~~~-~~ 308 (426)
T cd07087 236 AGQTCIAPDYVLVHESIKDELIEELKKAIKEFYGEDP-KESPDYGRIINERHFDRLASLLDDG-----KVVIGGQVD-KE 308 (426)
T ss_pred cCCccccCCEEEEcHHHHHHHHHHHHHHHHHHcCCCC-ccCCCcCCCCCHHHHHHHHHHHhcc-----eEEeCCccC-CC
Confidence 9999999999999999999999999999999987776 4688999999999999999999865 799998653 35
Q ss_pred CceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 423 GYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 423 g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 309 g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~ 344 (426)
T cd07087 309 ERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDL 344 (426)
T ss_pred CCEEeeEEEecCCCCCHHHhcccccceEEEEEeCCH
Confidence 899999999999999999999999999999999985
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. |
| >cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-67 Score=539.09 Aligned_cols=328 Identities=18% Similarity=0.207 Sum_probs=287.6
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHH--HHHHHHHhhh
Q 012658 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTR--LFRYYAGWAD 182 (459)
Q Consensus 105 v~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~--~l~~~a~~~~ 182 (459)
+++|++.|++||+ .|+++|+.+|.++|+++++.|++|+++|+++++.|+|||+.++.. ++..... ..++++.
T Consensus 1 ~~~Ai~~A~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~~-~~~~~~~~~~~~~~~~--- 74 (439)
T cd07081 1 LDDAVAAAKVAQQ--GLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDKV-IKNHFAAEYIYNVYKD--- 74 (439)
T ss_pred CHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHH-HHHHHHHHHHHHHHhc---
Confidence 4789999999999 999999999999999999999999999999999999999988753 4444433 2233332
Q ss_pred hhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHH----HcCC
Q 012658 183 KIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGL 258 (459)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~----~aGl 258 (459)
...+...+.+.+...++.++|+|||++|+|||||+...++++++||++||+||+|||+++|.++..+++++. ++|+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~aG~ 154 (439)
T cd07081 75 EKTCGVLTGDENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGA 154 (439)
T ss_pred cccCceecCCCCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHcCC
Confidence 222223333234456889999999999999999999999999999999999999999999999999888875 6799
Q ss_pred CCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHH
Q 012658 259 PPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 338 (459)
Q Consensus 259 P~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~ 338 (459)
|+|+||+|+|.+.+.+..|+.||+|++|.||||+++ ++.+++ ++||+++|+|||+|+||++|||+|.|++.++++
T Consensus 155 P~gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~v----~~~aa~-~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~~ 229 (439)
T cd07081 155 PENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPAV----VKAAYS-SGKPAIGVGAGNTPVVIDETADIKRAVQSIVKS 229 (439)
T ss_pred ChhhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHHH----HHHHHh-cCCCEEEEcCCCCeEEEcCCCCHHHHHHHHHHH
Confidence 999999999877788999999999999999999984 555665 789999999999999999999999999999999
Q ss_pred hhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCc-
Q 012658 339 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE- 417 (459)
Q Consensus 339 ~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~- 417 (459)
+|.|+||.|++.+|+|||+++||+|+++|.+++ ||+++.++++++.++|+++.++|++++.|+.
T Consensus 230 ~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~---------------gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~~~ 294 (439)
T cd07081 230 KTFDNGVICASEQSVIVVDSVYDEVMRLFEGQG---------------AYKLTAEELQQVQPVILKNGDVNRDIVGQDAY 294 (439)
T ss_pred HhcCCCCCCCCCCEEEEcHHHHHHHHHHHHHcC---------------CccCCHHHHHHHHHHHHhcCCcCCcccCCCHH
Confidence 999999999999999999999999999998763 8999999999999999999999998754432
Q ss_pred c-cCCCCceEecE---EEeeCC--CCCCCcCcCCCcceEEEEecCCC
Q 012658 418 R-LGAKGYYIKPT---VFTGVK--VLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 418 ~-~~~~g~~~~PT---vl~~v~--~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
. ....|+|++|| ++.+++ ++|++++||+||||++|++|+|+
T Consensus 295 ~~~~~~G~~~~pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~~ 341 (439)
T cd07081 295 KIAAAAGLKVPQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANF 341 (439)
T ss_pred HHHHHcCCccCCCceEEEEecCCCCCCchhhhCccCceEEEEEcCCH
Confidence 1 12358999999 999998 99999999999999999999986
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. |
| >cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-66 Score=536.54 Aligned_cols=340 Identities=22% Similarity=0.285 Sum_probs=305.5
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhh
Q 012658 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184 (459)
Q Consensus 105 v~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~ 184 (459)
+++|++.|++||+ .|++++..+|.++|+++++.|+++.++|++++++|+|||..++. .|+..+++.+++++..++..
T Consensus 1 v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~~~-~ev~~~~~~l~~~a~~~~~~ 77 (454)
T cd07129 1 VDAAAAAAAAAFE--SYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQ-GELGRTTGQLRLFADLVREG 77 (454)
T ss_pred ChHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHH-HHHHHHHHHHHHHHHHHHhc
Confidence 4789999999999 99999999999999999999999999999999999999998765 69999999999999877643
Q ss_pred c--CcccCC-------CCCceEEEEEccceEEEEEcCCCchHHh--hHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHH
Q 012658 185 Q--GLTAPA-------DGPYHVQTLHEPIGVAGQIIPWNFPLLM--FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLL 253 (459)
Q Consensus 185 ~--~~~~~~-------~~~~~~~~~~~P~GVv~~i~p~n~P~~~--~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll 253 (459)
. +...+. ..+...+.+++|+|||++|+|||||+.. .++++++||++||+||+|||+.+|+++.++++++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~ 157 (454)
T cd07129 78 SWLDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAI 157 (454)
T ss_pred CCccccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHH
Confidence 2 221110 1123457889999999999999999988 4589999999999999999999999999998876
Q ss_pred H----HcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhc-CCCceEEecCCcCcEEEccCC--
Q 012658 254 H----EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS-NLKPVTLELGGKSPFIVCEDA-- 326 (459)
Q Consensus 254 ~----~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~-~~~pv~lelgG~~p~iV~~dA-- 326 (459)
. ++|+|+|+||+|+|++.+.+..|+.|++|+.|+||||+.+|+.|++.++++ +++|+++|+|||||+||++|+
T Consensus 158 ~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~~iV~~da~~ 237 (454)
T cd07129 158 RAALRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGALA 237 (454)
T ss_pred HHHHHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCcEEEeCCcch
Confidence 4 899999999999997767899999999999999999999999999988863 589999999999999999999
Q ss_pred -CHHHHHHHHHHHhhccCCCccccCceeEeeCc-chHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 012658 327 -DVDKAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 404 (459)
Q Consensus 327 -Dld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~-v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~ 404 (459)
|+|.|++.+++++|.|+||.|++++|||||++ ++|+|+++|+++++++++ ||++++.+.++..++|++
T Consensus 238 ~dl~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~~i~d~f~~~l~~~~~~~~~----------g~~~~~~~~~~~~~~i~~ 307 (454)
T cd07129 238 ERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPA----------QTMLTPGIAEAYRQGVEA 307 (454)
T ss_pred HHHHHHHHHHHHHHhcCCCCeecCCceEEEeCcccHHHHHHHHHHHHhccCC----------CCCcChHHHHHHHHHHHH
Confidence 89999999999999999999999999999999 999999999999998875 467777777888889999
Q ss_pred HHhC-CCeEEeCCcccCCCCceEecEEEeeCC---CCCCCcCcCCCcceEEEEecCCC
Q 012658 405 GVDG-GAKLETGGERLGAKGYYIKPTVFTGVK---VLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 405 a~~~-Ga~v~~gg~~~~~~g~~~~PTvl~~v~---~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++++ |+++++||... .+|+|++|||+..++ ++|++++||+||||++|++|+|.
T Consensus 308 a~~~~ga~~l~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~ 364 (454)
T cd07129 308 LAAAPGVRVLAGGAAA-EGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDA 364 (454)
T ss_pred HHhcCCcEEEeCCCcC-CCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCH
Confidence 9998 99999999754 468999999998665 68999999999999999999984
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. |
| >cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-65 Score=532.33 Aligned_cols=335 Identities=24% Similarity=0.249 Sum_probs=303.3
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhc
Q 012658 106 NRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185 (459)
Q Consensus 106 ~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~ 185 (459)
++|++.|++||. .|++++..+|.++|+++++.|+++.++|++++++|+|||+ +.. .|+..+++.++||+..++...
T Consensus 2 ~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~~-~ev~~~i~~~~~~~~~~~~~~ 77 (442)
T cd07084 2 ERALLAADISTK--AARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGW-MFA-ENICGDQVQLRARAFVIYSYR 77 (442)
T ss_pred hHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCch-hhh-hhhcchHHHHHHHHHHHHhcc
Confidence 679999999999 9999999999999999999999999999999999999998 544 599999999999998876532
Q ss_pred --Cc---ccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCC-C
Q 012658 186 --GL---TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGL-P 259 (459)
Q Consensus 186 --~~---~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGl-P 259 (459)
.. ..+.......+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+ |
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~~ag~~P 157 (442)
T cd07084 78 IPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLP 157 (442)
T ss_pred ccccccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHHHhCCCC
Confidence 21 11111134568899999999999999999999999999999999999999999999999999999999998 9
Q ss_pred CCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEccCC-CHHHHHHHHHHH
Q 012658 260 PGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDA-DVDKAAELAHYA 338 (459)
Q Consensus 260 ~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~dA-Dld~aa~~i~~~ 338 (459)
+|++++++|++. .+..|+.|++++.|+||||+++|+.|++.++. +|+++|+|||||+||++|| |+|.+++.++++
T Consensus 158 ~g~~~~v~g~~~-~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~---~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~ 233 (442)
T cd07084 158 PEDVTLINGDGK-TMQALLLHPNPKMVLFTGSSRVAEKLALDAKQ---ARIYLELAGFNWKVLGPDAQAVDYVAWQCVQD 233 (442)
T ss_pred ccceEEeeCCcH-HHHHHHcCCCCCEEEEECCHHHHHHHHHhccC---CcEEEeccCcCcEEECCChhhHHHHHHHHHHH
Confidence 999999999765 88999999999999999999999999988763 8999999999999999999 699999999999
Q ss_pred hhccCCCccccCceeEeeCc-chHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhC-CCeEEeCC
Q 012658 339 LFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG-GAKLETGG 416 (459)
Q Consensus 339 ~~~~~GQ~C~a~~~v~V~e~-v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~-Ga~v~~gg 416 (459)
+|.|+||.|++++++|||++ ++|+|+++|+++++++++| ++++||++++ ++.++|++++++ |+++++||
T Consensus 234 ~~~~~GQ~C~a~~rl~V~~~~i~~~f~~~l~~~~~~~~~g-----~~~~gpl~~~----~~~~~i~~a~~~gga~~~~gg 304 (442)
T cd07084 234 MTACSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLE-----DLLLGPVQTF----TTLAMIAHMENLLGSVLLFSG 304 (442)
T ss_pred HhcccCCeecCCcEEEEeCCccHHHHHHHHHHHHHhcccC-----ccccChhhhH----HHHHHHHHHHhcCCcEEEeCC
Confidence 99999999999999999999 9999999999999999998 6789999775 455667777777 59999998
Q ss_pred ccc------CCCCceEecEEEeeCCCCC---CCcCcCCCcceEEEEecCC
Q 012658 417 ERL------GAKGYYIKPTVFTGVKVLI---LISPASISPNILHTFNGEN 457 (459)
Q Consensus 417 ~~~------~~~g~~~~PTvl~~v~~~~---~i~~~EifgPvl~v~~~~~ 457 (459)
... ...|+|++|||+.+++++| .+++||+||||++|++|+|
T Consensus 305 ~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~ 354 (442)
T cd07084 305 KELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKK 354 (442)
T ss_pred cccccCCCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeCC
Confidence 642 1258999999999999998 9999999999999999998
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. |
| >KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-65 Score=489.81 Aligned_cols=376 Identities=28% Similarity=0.486 Sum_probs=348.7
Q ss_pred CCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCC
Q 012658 78 ASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGK 157 (459)
Q Consensus 78 ~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gk 157 (459)
.+.+++..+-|.||+.+++++..++.|+++-+..|++|++ .|.+.+...|.++|+.+.+.|-+|.|.+++..++|+||
T Consensus 61 ~~~~~vqCycPatg~yLG~fp~~~~tdide~v~la~kAQk--tW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDtGK 138 (583)
T KOG2454|consen 61 QSDKKVQCYCPATGKYLGYFPALSPTDIDERVTLARKAQK--TWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDTGK 138 (583)
T ss_pred CCCCceEEecCCCcceeeecccCChhhHHHHHHHHHHHHh--hhhhccHHHHHHHHHHHHHHHhhchhheeeeeecccCc
Confidence 3557889999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred ChhhhhhcchHHHHHHHHHHHHhhhhhcCc-ccCCC---CCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCe
Q 012658 158 PFEQSAQTEVPMTTRLFRYYAGWADKIQGL-TAPAD---GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 233 (459)
Q Consensus 158 p~~~a~~~ev~~~~~~l~~~a~~~~~~~~~-~~~~~---~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~ 233 (459)
+..++..+||--.++.+.|.....++.... ..|.. .-...++.++|+||++.|.|||||+...+.++..||.+||+
T Consensus 139 TmvDAs~GEIlvTlEKI~Wtl~~Ger~L~P~~Rpn~~~~~yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlFsGNa 218 (583)
T KOG2454|consen 139 TMVDASLGEILVTLEKITWTLSEGERWLKPESRPNGRAMLYKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAALFSGNA 218 (583)
T ss_pred hhhhhhHhHHHHHHHHhhhhhhcchhhcCCcCCCchhheeeccceEEEeecceEEEeeecCCchhhhhhHHHHHHhcCCe
Confidence 999999999999999999988766554322 22211 12346789999999999999999999999999999999999
Q ss_pred EEeecCCCchHHHHHHHHH----HHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCc
Q 012658 234 IVLKTAEQTPLSALYVSKL----LHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKP 309 (459)
Q Consensus 234 VVlKps~~~p~~~~~l~~l----l~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~p 309 (459)
+|+|-|+.+.++.....++ |+..|-|+++|+++++. ++.+++|.+|++++++.|.||+.+++.|++.+++ .++|
T Consensus 219 IVvK~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itcl-pd~a~~ltSh~g~khitFiGSqpvak~i~~~AAk-~LTP 296 (583)
T KOG2454|consen 219 IVVKVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITCL-PDTAEALTSHSGVKHITFIGSQPVAKMIMRNAAK-TLTP 296 (583)
T ss_pred EEEEeecceeeehhhHHHHHHHHHHHcCCCcchhheeecC-cchHhHhhcCCCcceEEEecCcHHHHHHHHhhhh-hcCc
Confidence 9999999999888765554 55679999999999995 4678999999999999999999999999999998 9999
Q ss_pred eEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCccccc
Q 012658 310 VTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQ 389 (459)
Q Consensus 310 v~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl 389 (459)
|++|||||+++||++|+|+++.+..++++.|..+||.|...+|++||+++||.|+..|-.++..++.|.|...+.|||.|
T Consensus 297 v~lELGGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGiER~iv~k~~Yd~~i~~l~~rv~s~r~G~~~~~~vDMGAm 376 (583)
T KOG2454|consen 297 VTLELGGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGIERFIVHKDIYDAFIGQLTKRVKSVRAGPPLTGRVDMGAM 376 (583)
T ss_pred EEEeecCcccEEEeccccHHHHHHHHHhhhhhhcCCcccceeEEEEecchHHHHHHHHHHHHHHHHcCCCccCccchhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCeEEeCCcccC----CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCC
Q 012658 390 IDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGEN 457 (459)
Q Consensus 390 ~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~ 457 (459)
++.++++.++++|+||+++||++++||.+.+ ..|.|++||++.||+++|+|++||.||||+++.+.++
T Consensus 377 ~s~nrfdhLesLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~im~ak~ 448 (583)
T KOG2454|consen 377 CSQNRFDHLESLVNDAVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMPIMQAKT 448 (583)
T ss_pred hhccchHHHHHHHHHHHhhcchhhhcccccCCCCCCcccccCCeEEEecCchhhhHhhhccccchhhhhcCC
Confidence 9999999999999999999999999998753 5699999999999999999999999999999998765
|
|
| >cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-64 Score=521.84 Aligned_cols=349 Identities=49% Similarity=0.783 Sum_probs=327.9
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhc
Q 012658 106 NRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185 (459)
Q Consensus 106 ~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~ 185 (459)
+++++.|++|+. .|+.++..+|.++|+++++.|.++.++|+++++.|+||++.++. .|+..+++.+++++...+++.
T Consensus 1 ~~av~~a~~a~~--~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~~~~-~ei~~~i~~l~~~~~~~~~~~ 77 (432)
T cd07078 1 DAAVAAARAAFK--AWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEAL-GEVARAADTFRYYAGLARRLH 77 (432)
T ss_pred CHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 368899999999 99999999999999999999999999999999999999987754 599999999999998888765
Q ss_pred Ccc-cCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEE
Q 012658 186 GLT-APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLN 264 (459)
Q Consensus 186 ~~~-~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~ 264 (459)
+.. .+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+++
T Consensus 78 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~~~ 157 (432)
T cd07078 78 GEVIPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLN 157 (432)
T ss_pred CccccccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcCcEE
Confidence 543 2333466788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCC
Q 012658 265 IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 344 (459)
Q Consensus 265 vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~G 344 (459)
++++++.+.+..|..|++++.|.||||..+++.|.+.+++ +++|+++|+||++++||++|+|++.+++.+++++|.++|
T Consensus 158 ~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~-~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~~~~G 236 (432)
T cd07078 158 VVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAE-NLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAG 236 (432)
T ss_pred EEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-ccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccC
Confidence 9999766688999999999999999999999999999987 789999999999999999999999999999999999999
Q ss_pred CccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCC-CC
Q 012658 345 QCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA-KG 423 (459)
Q Consensus 345 Q~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~-~g 423 (459)
|.|+++++||||++++|+|+++|++++.++++|+|+++++++||++++.+++++.++|+++.++|+++++||..... .|
T Consensus 237 q~C~a~~~i~v~~~~~~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~~~~g 316 (432)
T cd07078 237 QVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEGGKG 316 (432)
T ss_pred CCccCCceEEEcHHHHHHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999976432 58
Q ss_pred ceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 424 YYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 424 ~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+|++|||+.+++++++++++|+||||++|++|+|+
T Consensus 317 ~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~ 351 (432)
T cd07078 317 YFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDE 351 (432)
T ss_pred cEEccEEEecCCCCChhhhCCCcCceEEEEEeCCH
Confidence 99999999999999999999999999999999985
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer |
| >cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-65 Score=523.43 Aligned_cols=325 Identities=22% Similarity=0.225 Sum_probs=287.6
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhh
Q 012658 102 AEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA 181 (459)
Q Consensus 102 ~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~ 181 (459)
.+|+++|++.|++||+ .|++++..+|.++|+++++.|++|.++|++++++|+|||+.++. .+.+++++...
T Consensus 3 ~~~v~~av~~A~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~-------~~~~~~~~~~~ 73 (429)
T cd07121 3 FATVDDAVAAAKAAQK--QYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDK-------IAKNHLAAEKT 73 (429)
T ss_pred hhhHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-------HHHHHHHHHhc
Confidence 4799999999999999 99999999999999999999999999999999999999976542 45566665422
Q ss_pred hhhcCcc-c-C---CCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHH---
Q 012658 182 DKIQGLT-A-P---ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLL--- 253 (459)
Q Consensus 182 ~~~~~~~-~-~---~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll--- 253 (459)
. +.. . + ...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++
T Consensus 74 ~---~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~ 150 (429)
T cd07121 74 P---GTEDLTTTAWSGDNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKA 150 (429)
T ss_pred C---cccccccccccCCCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHH
Confidence 1 111 1 1 112234578889999999999999999999999999999999999999999999999999887
Q ss_pred -HHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEccCCCHHHHH
Q 012658 254 -HEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAA 332 (459)
Q Consensus 254 -~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa 332 (459)
.++|+|+|++|+++|.+.+.+..|++|++||.|.||||+.+|+.|++. .+|+++|+|||||+||++|||+|+|+
T Consensus 151 ~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~-----~k~~~lelGGk~p~iV~~dADld~Aa 225 (429)
T cd07121 151 IAEAGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS-----GKKAIGAGAGNPPVVVDETADIEKAA 225 (429)
T ss_pred HHHcCCCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC-----CCceEeecCCCceEEEecCCCHHHHH
Confidence 478999999999998777789999999999999999999999999864 48999999999999999999999999
Q ss_pred HHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhC--CC
Q 012658 333 ELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG--GA 410 (459)
Q Consensus 333 ~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~--Ga 410 (459)
+.+++++|+|+||.|++++|+|||+++||+|+++|+++ + .++++..+++++.++|+++.+. |+
T Consensus 226 ~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~L~~~------~---------~~~i~~~~~~~v~~~i~~a~~~~~ga 290 (429)
T cd07121 226 RDIVQGASFDNNLPCIAEKEVIAVDSVADYLIAAMQRN------G---------AYVLNDEQAEQLLEVVLLTNKGATPN 290 (429)
T ss_pred HHHHhcccccCCCCCCccceEEEeHHHHHHHHHHHHHC------C---------CEEcCHHHHHHHHHhhcccCCCcccc
Confidence 99999999999999999999999999999999999875 1 1478999999999999999864 79
Q ss_pred eEEeCCccc---CCCCceEe---cEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 411 KLETGGERL---GAKGYYIK---PTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 411 ~v~~gg~~~---~~~g~~~~---PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++++||... ...|+|++ |||+.+++++|++++||+||||++|++|+|+
T Consensus 291 ~~~~gg~~~~~~~~~G~~~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~~ 344 (429)
T cd07121 291 KKWVGKDASKILKAAGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNF 344 (429)
T ss_pred ccccCcCHHHHHHHcCCCCCCCCeEEEEecCCCCCccccccccceEEEEEeCCH
Confidence 999998531 12478887 4999999999999999999999999999985
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. |
| >PRK15398 aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-64 Score=520.07 Aligned_cols=330 Identities=21% Similarity=0.199 Sum_probs=288.2
Q ss_pred cCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHH
Q 012658 99 EGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA 178 (459)
Q Consensus 99 ~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a 178 (459)
....+|++++++.|++||. .|+.++..+|.++|+++++.|++|.++|+++++.|+|||+.++.. ..+++++
T Consensus 32 ~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~~ea~~-------~~~~~~~ 102 (465)
T PRK15398 32 MGVFASVDDAVAAAKVAQQ--RYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKI-------AKNVAAA 102 (465)
T ss_pred ccHHHHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHH-------HHHHHHH
Confidence 4678999999999999999 999999999999999999999999999999999999999877542 3345555
Q ss_pred Hhhhhh---cCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHH-
Q 012658 179 GWADKI---QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH- 254 (459)
Q Consensus 179 ~~~~~~---~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~- 254 (459)
...... ...... ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.
T Consensus 103 ~~~~~~~~~~~~~~~-~~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~~ 181 (465)
T PRK15398 103 EKTPGVEDLTTEALT-GDNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNE 181 (465)
T ss_pred HHhccccccccCccc-CCCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHHH
Confidence 443211 111111 123456788899999999999999999999999999999999999999999999999999876
Q ss_pred ---HcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEccCCCHHHH
Q 012658 255 ---EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKA 331 (459)
Q Consensus 255 ---~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~dADld~a 331 (459)
++|+|+|++|++++.+.+.+..|.+|++||.|.||||+++|+.|++ ..+|+++|+|||||+||++|||+|.|
T Consensus 182 ~l~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~-----~~k~~~~elGGk~p~IV~~dADld~A 256 (465)
T PRK15398 182 AIVAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK-----SGKKAIGAGAGNPPVVVDETADIEKA 256 (465)
T ss_pred HHHHcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHH-----cCCceeeecCCCceEEEecCCCHHHH
Confidence 6899999999999877778999999999999999999999999987 25899999999999999999999999
Q ss_pred HHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCe
Q 012658 332 AELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK 411 (459)
Q Consensus 332 a~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~ 411 (459)
++.|++++|.|+||.|++++|||||+++||+|+++|+++ + +|+++..+++++.++++++.+++++
T Consensus 257 a~~i~~g~~~n~GQ~C~A~~rvlV~~si~d~f~~~l~~~------~---------~~li~~~~~~~v~~~l~~~~~~~~~ 321 (465)
T PRK15398 257 ARDIVKGASFDNNLPCIAEKEVIVVDSVADELMRLMEKN------G---------AVLLTAEQAEKLQKVVLKNGGTVNK 321 (465)
T ss_pred HHHHHHhcccCCCCcCCCCceEEEeHHHHHHHHHHHHHc------C---------CccCCHHHHHHHHHHHhhcccccch
Confidence 999999999999999999999999999999999999875 1 2789999999999999976555677
Q ss_pred EEeCCcc---cCCCCceE---ecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 412 LETGGER---LGAKGYYI---KPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 412 v~~gg~~---~~~~g~~~---~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++.||.. .+..|+|+ +|||+.++++||++++||+||||++|++|+|+
T Consensus 322 ~~~g~~~~~i~~~~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~ 374 (465)
T PRK15398 322 KWVGKDAAKILEAAGINVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVKDV 374 (465)
T ss_pred hhhCCCHHHHHHhCCCCCCCCCCEEEecCCCCCchhcccccCceEEEEEeCCH
Confidence 8877642 12246666 48999999999999999999999999999985
|
|
| >cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-63 Score=511.92 Aligned_cols=329 Identities=21% Similarity=0.267 Sum_probs=292.8
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHH-HHHHHHHhhhh
Q 012658 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTR-LFRYYAGWADK 183 (459)
Q Consensus 105 v~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~-~l~~~a~~~~~ 183 (459)
+++|++.|++||. .|++++..+|.++|++++++|+++.++|++++++|+|||+.++...|+..+++ .+++++.. .
T Consensus 1 ~~~av~~A~~A~~--~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~--~ 76 (436)
T cd07122 1 VDELVERARKAQR--EFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM--K 76 (436)
T ss_pred ChHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC--c
Confidence 4789999999999 99999999999999999999999999999999999999998876557777777 77888753 2
Q ss_pred hcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHH----HcCCC
Q 012658 184 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLP 259 (459)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~----~aGlP 259 (459)
..+.. ....+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++. ++|+|
T Consensus 77 ~~g~~-~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG~P 155 (436)
T cd07122 77 TVGVI-EEDEEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAGAP 155 (436)
T ss_pred ceeee-ccCCCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcCCC
Confidence 22221 11224456788999999999999999999999999999999999999999999999999888864 78999
Q ss_pred CCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHh
Q 012658 260 PGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYAL 339 (459)
Q Consensus 260 ~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~ 339 (459)
+|++|+++|.+.+.+..|.+|++|+.|.||||+++++. +++ +++|+++|+|||||+||++|||+|.|++.+++++
T Consensus 156 ~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~~~----a~~-~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~~ 230 (436)
T cd07122 156 EGLIQWIEEPSIELTQELMKHPDVDLILATGGPGMVKA----AYS-SGKPAIGVGPGNVPAYIDETADIKRAVKDIILSK 230 (436)
T ss_pred chhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHHHH----HHh-cCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHHh
Confidence 99999999977788999999999999999999997653 444 7899999999999999999999999999999999
Q ss_pred hccCCCccccCceeEeeCcchHHHHHHHHHHHHhh-------ccCCC-CCCCCcccccCCHHHHHHHHHHHHHHHhCCCe
Q 012658 340 FFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR-------VVGDP-FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK 411 (459)
Q Consensus 340 ~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~-------~vG~p-~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~ 411 (459)
|.|+||.|++++|+|||+++||+|+++|+++...+ ++|++ .+.++++||+++..+.+++.+++..++.+|++
T Consensus 231 f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~ga~ 310 (436)
T cd07122 231 TFDNGTICASEQSVIVDDEIYDEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEVPEDTK 310 (436)
T ss_pred hccCCCCCCCCCEEEEechhHHHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCCCCCCe
Confidence 99999999999999999999999999999998877 89998 46788999999999998888888877788888
Q ss_pred EEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 412 LETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 412 v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++.|| +.+++++|+++ +|.||||++|++|+|+
T Consensus 311 vl~~~--------------~~~v~~~~~~~-~E~FGPVl~v~~~~~~ 342 (436)
T cd07122 311 VLVAE--------------ETGVGPEEPLS-REKLSPVLAFYRAEDF 342 (436)
T ss_pred EEEEe--------------cCCCCCCCcch-hcccCCeEEEEEeCCH
Confidence 87655 46888999988 5679999999999985
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. |
| >KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-63 Score=475.63 Aligned_cols=342 Identities=27% Similarity=0.354 Sum_probs=310.7
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhh
Q 012658 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184 (459)
Q Consensus 105 v~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~ 184 (459)
+++.++.+|.+|.+| +.-+.+.|.+.|+++...+++|.+++.+++..|.+|+-.++...|+...+..++|+....++.
T Consensus 4 ~~~~v~~~R~~F~sG--rtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L~~w 81 (477)
T KOG2456|consen 4 ISETVRRLRLAFSSG--RTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENLPEW 81 (477)
T ss_pred HHHHHHHHHHHHhcC--CcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhHHh
Confidence 455588999999977 889999999999999999999999999999999999999998889999999999988776665
Q ss_pred cC-cccC---CCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCC
Q 012658 185 QG-LTAP---ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPP 260 (459)
Q Consensus 185 ~~-~~~~---~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~ 260 (459)
-. +..+ .......+.+.+|.|||++|+|||||+.+.+.++++||||||+||+|||+.+|.++..|++++.+. ++.
T Consensus 82 v~~~~v~~~~~t~~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Y-ld~ 160 (477)
T KOG2456|consen 82 VKPEPVKKSFLTFLDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQY-LDQ 160 (477)
T ss_pred ccccccCcccccccCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHh-cCc
Confidence 32 2222 223567889999999999999999999999999999999999999999999999999999999999 999
Q ss_pred CcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhh
Q 012658 261 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 340 (459)
Q Consensus 261 g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~ 340 (459)
+++.||.|. ......|..| +.|+|.||||+.+|+.|+.++++ +++||+||||||||++|++|+|++-+++.|+|++|
T Consensus 161 ~~~~VV~Gg-v~ETt~LL~~-rfD~IfyTGsp~VgkIim~aAaK-hLTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk~ 237 (477)
T KOG2456|consen 161 DLIRVVNGG-VPETTELLKQ-RFDHIFYTGSPRVGKIIMAAAAK-HLTPVTLELGGKSPCYVDKNCDLKIAARRIAWGKW 237 (477)
T ss_pred ceEEEecCC-CchHHHHHHh-hccEEEecCCchHHHHHHHHHHh-cCCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHhh
Confidence 999999995 4455566665 89999999999999999999998 99999999999999999999999999999999999
Q ss_pred ccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccC
Q 012658 341 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 420 (459)
Q Consensus 341 ~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~ 420 (459)
.|+||.|.+++.|+++.+++++++++++..+++. .|....++.|++.+|+..+|+|+.+.+++- .+|+.||..+.
T Consensus 238 ~N~GQtCvapDYiL~~k~~~~kli~alk~~l~eF-YG~n~~eS~d~sRiIn~~hf~Rl~~ll~~~----~kv~~Gg~~d~ 312 (477)
T KOG2456|consen 238 MNSGQTCVAPDYILCSKSIQPKLIDALKSTLKEF-YGENPKESKDLSRIINQRHFQRLSALLDET----GKVAIGGESDE 312 (477)
T ss_pred ccCCCeeccCCeEEecHhhhHHHHHHHHHHHHHH-hCCCccccccHHHHhhHHHHHHHHHHhcCC----CceecCCccch
Confidence 9999999999999999999999999999999887 576667889999999999999999888753 47899998654
Q ss_pred CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 421 AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 421 ~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
...|++|||+.||++++++|+||+|||||||+.|.|+
T Consensus 313 -~d~~I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~~l 349 (477)
T KOG2456|consen 313 -SDRYIAPTILLDVPEDSPVMQEEIFGPILPIITVQSL 349 (477)
T ss_pred -hhcccCCeEEecCCCCChhhhhhhccCccceeEhhhH
Confidence 4579999999999999999999999999999999875
|
|
| >TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-62 Score=509.20 Aligned_cols=336 Identities=19% Similarity=0.177 Sum_probs=296.9
Q ss_pred cCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHH
Q 012658 99 EGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA 178 (459)
Q Consensus 99 ~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a 178 (459)
..+.+|++++++.|++||+ .|++++..+|.++|+++++.|+++.++|+++++.|+|||..+.+..+.......+.+++
T Consensus 4 ~~~~~~v~~av~~A~~A~~--~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~~~~ 81 (488)
T TIGR02518 4 LYSIQQVRNLIRSAKVAQK--KLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIVYDSI 81 (488)
T ss_pred ccCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHH
Confidence 3578899999999999999 99999999999999999999999999999999999999987754323334555555554
Q ss_pred HhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHH----HHHHH
Q 012658 179 GWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV----SKLLH 254 (459)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l----~~ll~ 254 (459)
...+. .+. ...+.+...+..++|+|||++|.|||||+....+++++||++||+||+|||+.+|.++..+ .+++.
T Consensus 82 ~~~~~-~G~-~~~~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~l~ 159 (488)
T TIGR02518 82 KDMKT-IGI-LSEDKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAE 159 (488)
T ss_pred hhCcc-cce-ecCCCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHHHH
Confidence 43222 232 2223345577899999999999999999999999999999999999999999999999985 45568
Q ss_pred HcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHH
Q 012658 255 EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAEL 334 (459)
Q Consensus 255 ~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~ 334 (459)
++|+|+|+||++++.+.+.+..|++|++||.|.||||+.+++.+ +. ..+|+++|+|||+|+||++|||+|.|++.
T Consensus 160 eaGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~~~a----~~-~~~pv~~e~gGn~p~iV~~dADld~Aa~~ 234 (488)
T TIGR02518 160 EAGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMVKAA----YS-SGTPAIGVGPGNGPAYIERTANVKKAVRD 234 (488)
T ss_pred HcCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHHHHH----HH-cCCCEEEEcCCCCeEEEeCCCCHHHHHHH
Confidence 99999999999998777889999999999999999999976543 33 67999999999999999999999999999
Q ss_pred HHHHhhccCCCccccCceeEeeCcchHHHHHHHHHH-------HHhhccCCC-CCCCCcccccCCHHHHHHHHHHHHHHH
Q 012658 335 AHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANAL-------AMKRVVGDP-FKGGIQQGPQIDSEQFEKILKYIRSGV 406 (459)
Q Consensus 335 i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~-------~~~~~vG~p-~~~~~~~Gpl~~~~~~~~i~~~i~~a~ 406 (459)
+++++|+|+||.|++.+++|||+++||+|+++|+++ .+.+++|+| +++++++||+++..+++++.++++.++
T Consensus 235 iv~sk~~~~Gq~C~a~~rllV~~~i~d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~~av 314 (488)
T TIGR02518 235 IIDSKTFDNGTICASEQSIIVEECNKDAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLAGLTV 314 (488)
T ss_pred HHHHHhcCCCCCCCCCCEEEEeHHHHHHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHHhcccc
Confidence 999999999999999999999999999999999998 899999996 678999999999999999999999999
Q ss_pred hCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 407 DGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 407 ~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
.+|+++++||.. .++++|++ ++|.||||++|++|+|+
T Consensus 315 ~~gakll~gg~~--------------~v~~~~~~-~~E~fgPVl~v~~~~~~ 351 (488)
T TIGR02518 315 PEDAKVLIGEQN--------------GVGNKNPY-SREKLTTILAFYTEENW 351 (488)
T ss_pred CCCCEEEEeCCC--------------CCCCCCcc-ccCccCceEEEEEeCCH
Confidence 999999999852 36788886 79999999999999986
|
|
| >KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-61 Score=465.72 Aligned_cols=390 Identities=25% Similarity=0.358 Sum_probs=359.0
Q ss_pred CCccCceecCEeeeCCCCCeeeeeCCCC-CCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHH
Q 012658 63 VDYTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE 141 (459)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~ 141 (459)
...+++.|||+.+.+ ..++...+|++ +.+++.+..++.+++++||+.|.+|+. .|..+|..+|.+|++++|++++
T Consensus 57 ~~evP~vIg~~~v~t--~~~q~q~~P~~hq~~lA~~~yA~~k~ie~AIkaAl~a~~--~W~~~PiadR~aI~lkAAdlis 132 (561)
T KOG2455|consen 57 PLEVPLVIGDKEVYT--NDEQYQVCPHNHQHVLAKVYYATKKQIEKAIKAALSAQK--TWELVPIADRLAIFLKAADLIS 132 (561)
T ss_pred ceeccEEECCeeeec--CCcccccCCchhhhhhhheeeccHHHHHHHHHHHHhhcC--ccccCcHHHHHHHHHHHHHHhc
Confidence 334589999999985 44588899987 788999999999999999999999998 9999999999999999999999
Q ss_pred -HcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCC-CCCceEEEEEccc-eEEEEEcCCCchHH
Q 012658 142 -RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPI-GVAGQIIPWNFPLL 218 (459)
Q Consensus 142 -~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~-GVv~~i~p~n~P~~ 218 (459)
+++-+|....++..||...++...-+.+.++.+|+.+..+.++....... ..+..+...++|+ |.|..|+||||-.+
T Consensus 133 tkyr~~l~aatMlgqgKt~~qAeiDa~~eLidf~R~na~ya~eL~~~qpi~~~~~t~ns~~yRpleGFVaAisPFnftAI 212 (561)
T KOG2455|consen 133 TKYRYDLLAATMLGQGKTAIQAEIDAAAELIDFFRFNAKYASELYAQQPISQTKGTWNSMEYRPLEGFVAAISPFNFTAI 212 (561)
T ss_pred chHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHhHHHHHHhhhcCCccccCCCCcceeeccccceeEEecccceeee
Confidence 88889999999999999999866557788888999998888876654433 4566677788887 99999999999999
Q ss_pred hhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHH
Q 012658 219 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 298 (459)
Q Consensus 219 ~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 298 (459)
..-...+||| +||+|++|||..+.+++.++.++|+|||+|+|++|+||++++..++.+..++++.++.||||+.+-+.+
T Consensus 213 ~gnLa~aPaL-MGN~VLwkPS~ta~lssYii~~il~EAGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~~fk~l 291 (561)
T KOG2455|consen 213 GGNLAGAPAL-MGNVVLWKPSDTAALSSYIIYRILREAGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVPTFKHL 291 (561)
T ss_pred ccccccChhh-hcceeeecccchhHHHHHHHHHHHHHcCCCccceeeccCCCCeecceeccCcccceeeeecccHHHHHH
Confidence 8888888998 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHh-----cCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHh
Q 012658 299 LQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK 373 (459)
Q Consensus 299 ~~~~a~-----~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~ 373 (459)
++..++ +.+.+++.|.||||.-+|.++||++.++...++++|.++||.|.+.+|+||+++.++.+.+.|.+.-++
T Consensus 292 wk~V~~n~~~Y~~fPrlvgEcgGkNFHfVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~wp~i~e~l~~~~~q 371 (561)
T KOG2455|consen 292 WKKVGENVDNYRTFPRLVGECGGKNFHFVHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLWPQIREELVEEHSQ 371 (561)
T ss_pred HHHHHhhhhhhhcchhhhccCCCcceEEeccccchHHHHHHHHHHHHhhcccccchhhhcccchhhcHHHHHHHHHHHhh
Confidence 888876 346899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCC-CCCCCcccccCCHHHHHHHHHHHHHHHhC-CCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEE
Q 012658 374 RVVGDP-FKGGIQQGPQIDSEQFEKILKYIRSGVDG-GAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILH 451 (459)
Q Consensus 374 ~~vG~p-~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~-Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~ 451 (459)
+++|+| .|.++++||+|+...|+|+.++|+.|++. ..++++||+-+++.|+|++|||+...+|..++|.||+|||||+
T Consensus 372 ~~igd~~~d~~~f~gavIh~~sF~rl~k~le~ak~~~~leiL~GGk~DdS~G~FV~PTiv~~kdP~~pim~ee~fGPvLs 451 (561)
T KOG2455|consen 372 LKIGDPVIDFSTFIGAVIHDKSFARLKKVLEHAKKDPELEILAGGKCDDSTGYFVEPTIVLSKDPKDPIMTEEIFGPVLS 451 (561)
T ss_pred cccCCccccccchhhhhccHHHHHHHHHHHHhhccCccceeeecCcccCCCCeeecceEEEccCCCcchhhhhccCceeE
Confidence 999998 78899999999999999999999999773 5789999999899999999999999999999999999999999
Q ss_pred EEecCC
Q 012658 452 TFNGEN 457 (459)
Q Consensus 452 v~~~~~ 457 (459)
|+-|+|
T Consensus 452 VyvY~D 457 (561)
T KOG2455|consen 452 VYVYED 457 (561)
T ss_pred EEEecc
Confidence 999987
|
|
| >PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-58 Score=511.57 Aligned_cols=338 Identities=19% Similarity=0.260 Sum_probs=290.4
Q ss_pred EEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHH
Q 012658 96 HVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFR 175 (459)
Q Consensus 96 ~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~ 175 (459)
.+...+.+|++++++.|++||+ .|++++..+|.++|+++++.|+++.++|++++++|+|||+.++...+...+.+.++
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~~~~ 82 (862)
T PRK13805 5 EMAVTNVAELDALVEKAKKAQE--EFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGVVEDKVIKNHFASEYIY 82 (862)
T ss_pred ccCCCCHHHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHH
Confidence 4567899999999999999999 99999999999999999999999999999999999999988765434444444444
Q ss_pred HHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHH-
Q 012658 176 YYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH- 254 (459)
Q Consensus 176 ~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~- 254 (459)
++.. .++..+. .+.+.....+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.
T Consensus 83 ~~~~-~~~~~g~-~~~~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~~~ 160 (862)
T PRK13805 83 NSYK-DEKTVGV-IEEDDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIVLD 160 (862)
T ss_pred HHhc-CCCcccc-cCcCCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHHHH
Confidence 3332 1122221 222234456788999999999999999999999999999999999999999999999999888865
Q ss_pred ---HcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEccCCCHHHH
Q 012658 255 ---EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKA 331 (459)
Q Consensus 255 ---~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~dADld~a 331 (459)
++|+|+|+||+++|.+.+.+..|++|++||.|.||||+.+++ .++. +++|+++|+|||+|+||++|||+|.|
T Consensus 161 ~l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~~----~a~~-~~~pv~~e~gGk~p~iV~~dADl~~A 235 (862)
T PRK13805 161 AAVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMVK----AAYS-SGKPALGVGAGNVPAYIDKTADIKRA 235 (862)
T ss_pred HHHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHHH----HHHh-cCCCeEEECCCCCeEEEeCCCCHHHH
Confidence 689999999999987778899999999999999999999754 3444 78999999999999999999999999
Q ss_pred HHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCe
Q 012658 332 AELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK 411 (459)
Q Consensus 332 a~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~ 411 (459)
++.|++++|+|+||.|+++++||||+++||+|+++|+++ | +|+++.++++++.++|+++.+.|+.
T Consensus 236 a~~i~~~k~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~------g---------~~l~~~~~~~~v~~~i~~a~~~~~~ 300 (862)
T PRK13805 236 VNDILLSKTFDNGMICASEQAVIVDDEIYDEVKEEFASH------G---------AYFLNKKELKKLEKFIFGKENGALN 300 (862)
T ss_pred HHHHHHhhhccCCCccCCCceEEEehhhHHHHHHHHHHh------C---------CeeCCHHHHHHHHHHHhhccCCCcC
Confidence 999999999999999999999999999999999999876 1 5899999999999999998766654
Q ss_pred E-EeCCccc---CCCCceEecEE------EeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 412 L-ETGGERL---GAKGYYIKPTV------FTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 412 v-~~gg~~~---~~~g~~~~PTv------l~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
. ++||... +..|+|++||+ +.+++++|++++ |+||||++|++|+|+
T Consensus 301 ~~~~g~~~~~~~~~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~~~ 356 (862)
T PRK13805 301 ADIVGQSAYKIAEMAGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAKDF 356 (862)
T ss_pred ccccCCCHHHHHHHcCCCCCCCCeEEEEecCCCCCCCcchh-cccCcEEEEEEECCH
Confidence 3 4566421 23488999997 778999999887 799999999999985
|
|
| >cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-58 Score=469.91 Aligned_cols=300 Identities=19% Similarity=0.207 Sum_probs=259.3
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChh----hhh-------hcchHHHHHHHH
Q 012658 107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE----QSA-------QTEVPMTTRLFR 175 (459)
Q Consensus 107 ~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~----~a~-------~~ev~~~~~~l~ 175 (459)
..++.|++||. .|++++..+|.++|+++++.|++|.++|+++++.|+||+.. ++. ..|+..+++.++
T Consensus 2 ~~~~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~ 79 (406)
T cd07079 2 ELAKRAKAASR--ALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLR 79 (406)
T ss_pred hHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHH
Confidence 45788999999 99999999999999999999999999999999777666643 222 148899999999
Q ss_pred HHHHhhhhhcCcccCC---CCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHH
Q 012658 176 YYAGWADKIQGLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKL 252 (459)
Q Consensus 176 ~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~l 252 (459)
+++...+. .+...+. +.+...+.+++|+|||++|+|| +| ...++++++||++||+||+|||+.+|+++..++++
T Consensus 80 ~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~ 156 (406)
T cd07079 80 QVAALPDP-VGEVLRGWTLPNGLQIEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSNRALVEI 156 (406)
T ss_pred HHHhcCCC-CcccccceeccCccceeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHH
Confidence 99876543 2333222 2234567899999999999996 56 67889999999999999999999999999999998
Q ss_pred HH----HcCCCCCcEEeecCCCh-hHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEccCCC
Q 012658 253 LH----EAGLPPGVLNIVSGYGP-TAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDAD 327 (459)
Q Consensus 253 l~----~aGlP~g~v~vv~g~~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~dAD 327 (459)
+. ++|+|+|++|+++|.+. ..+..|.+||++|+|.||||+++|+.|++.+ ++|+++|||||||+||++|||
T Consensus 157 ~~~~l~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a----~~pv~lELGGk~p~IV~~dAD 232 (406)
T cd07079 157 IQEALEEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENA----TIPVIKHGDGNCHVYVDESAD 232 (406)
T ss_pred HHHHHHHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhc----CCCEEeecCCcceEEEeCCCC
Confidence 86 89999999999998544 6788899999999999999999999998765 589999999999999999999
Q ss_pred HHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHh
Q 012658 328 VDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD 407 (459)
Q Consensus 328 ld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~ 407 (459)
+|.|++.+++++|.|+| .|++++|||||+++||+|+++|++++++
T Consensus 233 l~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~si~d~f~~~l~~~~~~---------------------------------- 277 (406)
T cd07079 233 LEMAVRIVVNAKTQRPS-VCNALETLLVHRDIAEEFLPKLAEALRE---------------------------------- 277 (406)
T ss_pred HHHHHHHHHHcccCCCc-ccccceeEEEeHHHHHHHHHHHHHHHHH----------------------------------
Confidence 99999999999999999 9999999999999999999999988775
Q ss_pred CCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 408 GGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 408 ~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
.|++++.|+.. ..|++|| +++||++++||+||||++|++|+|+
T Consensus 278 ~ga~~~~g~~~----~~~~~pt----v~~d~~i~~eE~FGPVl~v~~~~~~ 320 (406)
T cd07079 278 AGVELRGDEET----LAILPGA----KPATEEDWGTEYLDLILAVKVVDSL 320 (406)
T ss_pred CCCEEecCHHH----HHhcccc----cCCCcchhhhhhhCceeEEEEeCCH
Confidence 25675533321 1488998 7899999999999999999999986
|
Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1). |
| >PRK00197 proA gamma-glutamyl phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-57 Score=469.57 Aligned_cols=305 Identities=22% Similarity=0.231 Sum_probs=262.9
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChh----hhhh-------cchHHH
Q 012658 102 AEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE----QSAQ-------TEVPMT 170 (459)
Q Consensus 102 ~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~----~a~~-------~ev~~~ 170 (459)
.+|++++++.|++||. .|++++..+|.++|+++++.|++|.++|+++++.|+||+.. ++.. .|+..+
T Consensus 3 ~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~ 80 (417)
T PRK00197 3 MEYLEELGRRAKAASR--KLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGI 80 (417)
T ss_pred hhHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHH
Confidence 3689999999999999 99999999999999999999999999999999988877642 3321 478889
Q ss_pred HHHHHHHHHhhhhhcCcccCC---CCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHH
Q 012658 171 TRLFRYYAGWADKIQGLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247 (459)
Q Consensus 171 ~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~ 247 (459)
++.+++++.+++.. +...+. +.+...+.+++|+|||++|+||| | ..+++++++||++||+||+|||+.+|.++.
T Consensus 81 ~~~~~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~ 157 (417)
T PRK00197 81 AEGLRQVAALPDPV-GEVLDGWTLPNGLRIGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHSNR 157 (417)
T ss_pred HHHHHHHhhcCCCc-cccccceecCCCceEEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHHHH
Confidence 99999999877643 333332 22335788999999999999986 4 678899999999999999999999999999
Q ss_pred HHHHHH----HHcCCCCCcEEeecCCC-hhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEE
Q 012658 248 YVSKLL----HEAGLPPGVLNIVSGYG-PTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 322 (459)
Q Consensus 248 ~l~~ll----~~aGlP~g~v~vv~g~~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV 322 (459)
.+++++ .++|+|+|++|+|+|.+ .+.+..|..|++||+|.||||+.+|+.|++.+ ++|+++|||||||+||
T Consensus 158 ~l~~l~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a----~~~~~lELGGk~p~IV 233 (417)
T PRK00197 158 ALVAVIQEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENA----TVPVIEHGDGICHIYV 233 (417)
T ss_pred HHHHHHHHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhc----CCCEEeecCCcceEEE
Confidence 998885 68999999999999644 45788899999999999999999999998753 5899999999999999
Q ss_pred ccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHH
Q 012658 323 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 402 (459)
Q Consensus 323 ~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i 402 (459)
++|||+|.|++.+++++|.|+| .|++++|+|||+++||+|+++|++++++++++
T Consensus 234 ~~dAdl~~Aa~~iv~~~~~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~------------------------- 287 (417)
T PRK00197 234 DESADLDKALKIVLNAKTQRPS-VCNALETLLVHEAIAEEFLPKLAEALAEAGVE------------------------- 287 (417)
T ss_pred eCCCCHHHHHHHHHHhccCCCc-ccccceEEEEEHHHhHHHHHHHHHHHHHCCCe-------------------------
Confidence 9999999999999999999999 99999999999999999999999999987532
Q ss_pred HHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 403 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 403 ~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++ ||... .+ |+ |||+ +++|.+++||+||||++|++|+|+
T Consensus 288 ---------~~-~~~~~--~~-~~-PTi~---~~~~~i~~eE~FGPVl~v~~~~~~ 326 (417)
T PRK00197 288 ---------LR-GDEAA--LA-LL-PDVV---PATEEDWDTEYLDLILAVKVVDSL 326 (417)
T ss_pred ---------Ee-cCHHH--HH-hh-cccc---cCCcchhhhhhhCceEEEEEeCCH
Confidence 11 11110 12 33 9998 478999999999999999999985
|
|
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-56 Score=479.04 Aligned_cols=300 Identities=20% Similarity=0.205 Sum_probs=265.3
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHH------HHHcC--CChhhhh---hcchHHHH
Q 012658 103 EDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALE------TWDNG--KPFEQSA---QTEVPMTT 171 (459)
Q Consensus 103 ~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~------~~e~G--kp~~~a~---~~ev~~~~ 171 (459)
+++++++++|++||+ .|+++|..+|.++|+++++.|+++.++|++++ ++|+| ||+.++. ..|+..++
T Consensus 294 ~~~~~~~~aA~~A~~--~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~ 371 (718)
T PLN02418 294 VGAREMAVAARESSR--KLQALSSEERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLA 371 (718)
T ss_pred HHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHH
Confidence 359999999999999 99999999999999999999999999999996 77999 8877754 45999999
Q ss_pred HHHHHHHHhhhhhcCcccC---CCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHH
Q 012658 172 RLFRYYAGWADKIQGLTAP---ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 248 (459)
Q Consensus 172 ~~l~~~a~~~~~~~~~~~~---~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~ 248 (459)
+.++||++.. +..+...+ ...+...+..++|+|||++|+||| |+.+. ++++|||++||+||+|||+.+|+++..
T Consensus 372 ~~~~~~a~~~-~~~g~~~~~~~~~~~~~~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s~~~ 448 (718)
T PLN02418 372 ASIRQLADME-DPIGRVLKRTEVADGLVLEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARSNAI 448 (718)
T ss_pred HHHHHHhcCc-cccCccccccccCCCceEEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHHHHH
Confidence 9999999883 34444433 223444678999999999999999 99999 999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCc----EEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEcc
Q 012658 249 VSKLLHEAGLPPGV----LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324 (459)
Q Consensus 249 l~~ll~~aGlP~g~----v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~ 324 (459)
|++++.++ +|+|+ +|+|+| +.+.+..|..|++|++|.||||+..++ +.++. ++||+++|+|||||+||++
T Consensus 449 l~~l~~eA-lP~gv~~~v~nvv~g-~~~~g~~L~~~~~v~~V~FTGSt~~i~---~~aa~-~~k~v~lELGGk~p~iV~~ 522 (718)
T PLN02418 449 LHKVITDA-IPKTVGGKLIGLVTS-RDEIPDLLKLDDVIDLVIPRGSNKLVS---QIKAS-TKIPVLGHADGICHVYVDK 522 (718)
T ss_pred HHHHHHHH-ccccCCcceEEEeCC-cHHHHHHHhhCCCCCEEEEeCCHHHHH---HHHHh-cCCCEEEeCCCcceEEEeC
Confidence 99999999 99996 999998 667899999999999999999996544 44444 7899999999999999999
Q ss_pred CCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHH
Q 012658 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 404 (459)
Q Consensus 325 dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~ 404 (459)
|||+|.|++.+++++|.| ||.|++.+|+|||+++||+ | .+.++|++
T Consensus 523 DADld~A~~~i~~~~~~n-GQ~C~a~~RllVh~~i~d~------------------------G---------~~~~~i~~ 568 (718)
T PLN02418 523 SADMDMAKRIVVDAKTDY-PAACNAMETLLVHKDLVQN------------------------G---------GLNDLLVA 568 (718)
T ss_pred CCCHHHHHHHHHHHhCCC-CCccccCcEEEEecccccc------------------------c---------cHHHHHHH
Confidence 999999999999999999 9999999999999999997 2 35789999
Q ss_pred HHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 405 GVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 405 a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++++||++ +||.... | ++. + ++|++++||+|||+++|.+|+|+
T Consensus 569 a~~~Ga~l-~Gg~~~~--g------~l~-~-~~~~i~~eE~FgPv~~i~~~~~~ 611 (718)
T PLN02418 569 LRSAGVTL-YGGPRAS--K------LLN-I-PEAQSFHHEYSSLACTVEIVDDV 611 (718)
T ss_pred HHHCCCEE-ECCcccc--C------eeC-C-CCchhhhCCcCCeeEEEEEECCH
Confidence 99999999 6885432 3 343 4 88999999999999999999985
|
|
| >KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-57 Score=423.51 Aligned_cols=381 Identities=28% Similarity=0.485 Sum_probs=356.4
Q ss_pred ecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHH
Q 012658 70 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAA 149 (459)
Q Consensus 70 I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~ 149 (459)
.+|+|- .+|..+..++|++.++|+++..++.+|.+.++..+++|++ -|...|...|.+|.+++.|.|+...+-|-+
T Consensus 24 y~gkw~--a~g~vv~t~~pann~pia~v~~asv~dye~~~k~a~ea~k--iw~~vpapkrgeivrqigdalr~klq~lg~ 99 (507)
T KOG2453|consen 24 YHGKWA--ASGQVVQTFAPANNSPIANVQNASVQDYEIAIKEAKEAYK--IWCEVPAPKRGEIVRQIGDALRTKLQNLGK 99 (507)
T ss_pred eeeeec--cCCceeEeecCCCCChhHHHhhccHHHHHHHHHHHHHHHH--HHhcCCCCccchHHHHHHHHHHHHHHHHhh
Confidence 456995 3788999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCC-ceEEEEEccceEEEEEcCCCchHHhhHHHHHHHH
Q 012658 150 LETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 228 (459)
Q Consensus 150 ~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~-~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL 228 (459)
++++|+||-..+. .+|+..-++.++|..++.+.+.+..+|...+ ......|.|+|+|++|+.+|||-...-|.-+.|+
T Consensus 100 lvslemgkilaeg-vgevqeyvdicdyavglsr~l~g~i~pserpghalleqwnplg~vgvitafnfpcavygwnnaiaM 178 (507)
T KOG2453|consen 100 LVSLEMGKILAEG-VGEVQEYVDICDYAVGLSRSLEGKIFPSERPGHALLEQWNPLGVVGVITAFNFPCAVYGWNNAIAM 178 (507)
T ss_pred hhhhhhhhHhhhc-chhHHHHHHHHHHhhhhhhhhCCcccCCCCCchhHHHhcCCcceEEEEEeccCCceeeccCchhhh
Confidence 9999999998885 5799999999999999999999999887654 4445789999999999999999999999999999
Q ss_pred hcCCeEEeecCCCchHHHHHH----HHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHh
Q 012658 229 ACGNTIVLKTAEQTPLSALYV----SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304 (459)
Q Consensus 229 aaGN~VVlKps~~~p~~~~~l----~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~ 304 (459)
.+||+|++||++++|+++... ++.|.+--+|++......| +.+.+.++..+.++..+.||||+++++.+.+....
T Consensus 179 v~gncVvWKpApttpLtTiAvtklIaevL~qnnl~~aicsltcG-~aDigrAaakdgRvnlvsftGssQvgKsvgq~vqa 257 (507)
T KOG2453|consen 179 VCGNCVVWKPAPTTPLTTIAVTKLIAEVLEQNNLPGAICSLTCG-GADIGRAAAKDGRVNLVSFTGSSQVGKSVGQQVQA 257 (507)
T ss_pred hhcceeEecCCCCcceeHHHHHHHHHHHHhccCCCcceeeeccc-chhhhhhccccCceeecccccchhhhhHHHHHHHH
Confidence 999999999999999887654 4556666799998888888 77899999999999999999999999999888876
Q ss_pred cCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCC
Q 012658 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384 (459)
Q Consensus 305 ~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~ 384 (459)
++.+..+||||+|++||.+|||+..++...++++...+||.|+..+|++|||++||+++++|+...+.+++|+|+|+++
T Consensus 258 -rfgk~llelggnnaiiv~edadl~lvvps~lfaavgtagqrctt~rrl~~hesvyd~vlerlkkayaq~~ignpld~nt 336 (507)
T KOG2453|consen 258 -RFGKLLLELGGNNAIIVNEDADLNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVYDQVLERLKKAYAQFEIGNPLDSNT 336 (507)
T ss_pred -HhhhHHHhhcCCceEEEeccccceeeehHHHHHHhcccccchhhhhHHHhhHHHHHHHHHHHHHHHHheecCCcCCCCc
Confidence 6678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 385 ~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
-+||+.+++...+.+.-|++++++|.++++||+..+.+|+|++|||++ ...|.+++.+|.|.|||+|++++++
T Consensus 337 l~gplht~qav~~f~~~veeak~~ggki~yggkv~er~gnfveptivt-l~hda~vv~~etfapilyvlkf~~~ 409 (507)
T KOG2453|consen 337 LIGPLHTQQAVGKFKASVEEAKASGGKIEYGGKVLERDGNFVEPTIVT-LKHDAPVVLRETFAPILYVLKFSTL 409 (507)
T ss_pred eeccccCHHHHHHHHHHHHHHHhcCCeEEECCEeeccCCCcccceEEE-ecCCcchhhhhhccceeeEEeccch
Confidence 999999999999999999999999999999999888899999999997 8899999999999999999999886
|
|
| >TIGR00407 proA gamma-glutamyl phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-55 Score=448.99 Aligned_cols=299 Identities=19% Similarity=0.172 Sum_probs=254.6
Q ss_pred HHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHH------HHHHcCCCh--hhh---hhcchHHHHHHHHHHHHh
Q 012658 112 ARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAAL------ETWDNGKPF--EQS---AQTEVPMTTRLFRYYAGW 180 (459)
Q Consensus 112 A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~------~~~e~Gkp~--~~a---~~~ev~~~~~~l~~~a~~ 180 (459)
|++||. .|++++..+|.++|+++++.|++|.++|+++ +++|+|||. .++ ...|+..+++.++||++.
T Consensus 1 a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~~ev~~~~~~~~~~a~~ 78 (398)
T TIGR00407 1 AKQAAN--ILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTEGRLKGIADGVKDVIEL 78 (398)
T ss_pred ChhHHH--HHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCHHHHHHHHHHHHHHhcC
Confidence 467888 9999999999999999999999999999999 999999993 221 235899999999999988
Q ss_pred hhhhcCcccCC---CCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHH----H
Q 012658 181 ADKIQGLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKL----L 253 (459)
Q Consensus 181 ~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~l----l 253 (459)
++.. +...+. ..+...+.+++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..++++ |
T Consensus 79 a~~~-g~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al 155 (398)
T TIGR00407 79 ADPV-GKVIDGRELDSGLTLERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDAL 155 (398)
T ss_pred CCCC-cccccceecCCCceEEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHH
Confidence 8664 444432 23556788999999999999997 6 67889999999999999999999999999999999 5
Q ss_pred HHcCCCCCcEEeecCCC-hhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEccCCCHHHHH
Q 012658 254 HEAGLPPGVLNIVSGYG-PTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAA 332 (459)
Q Consensus 254 ~~aGlP~g~v~vv~g~~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa 332 (459)
.++|+|+|+||+|+|.+ ++.++.|..|++|++|.||||+.+|+.+++. ..+|+++|+|||||+||++|||+|.|+
T Consensus 156 ~eaGlP~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~----~~~~~~~e~gGk~p~iV~~dADl~~Aa 231 (398)
T TIGR00407 156 AQTGLPVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQT----STIPVLGHGDGICHIYLDESADLIKAI 231 (398)
T ss_pred HHcCCChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHh----CCCCEEEecCCcceEEEeCCCCHHHHH
Confidence 69999999999999844 4578899999999999999999999988764 458999999999999999999999999
Q ss_pred HHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeE
Q 012658 333 ELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKL 412 (459)
Q Consensus 333 ~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v 412 (459)
+.+++++|.+ ||.|++++|+|||+++||+|+++|++++.++++ .+++ .+.+.+++..
T Consensus 232 ~~iv~~~~~~-GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~--------~~~~------~~~i~~~v~~-------- 288 (398)
T TIGR00407 232 KVIVNAKTQR-PSTCNAIETLLVNKAIAREFLPVLENQLLEKGV--------TIHA------DAYALKLLEL-------- 288 (398)
T ss_pred HHHHhhhcCC-CCcccccceEEEeHHHHHHHHHHHHHHHHhcCC--------EEec------CHHHHHHHhc--------
Confidence 9999999975 999999999999999999999999999987643 1222 1334333321
Q ss_pred EeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 413 ETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 413 ~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
|| |||+ ++ +|.+++||+||||++|++|+|+
T Consensus 289 --g~-----------~tv~-~~--~~~i~~eE~FgPvl~v~~~~~~ 318 (398)
T TIGR00407 289 --GP-----------ATEA-IV--CKTDFDKEFLSLDLSVKIVESL 318 (398)
T ss_pred --cC-----------cccc-cc--ccccccchhhCceeEEEEECCH
Confidence 11 3554 33 3799999999999999999985
|
The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif. |
| >cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-55 Score=448.91 Aligned_cols=294 Identities=19% Similarity=0.183 Sum_probs=265.4
Q ss_pred HHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhh----------hcchHHHHHHHHHHHHh
Q 012658 111 AARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA----------QTEVPMTTRLFRYYAGW 180 (459)
Q Consensus 111 ~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~----------~~ev~~~~~~l~~~a~~ 180 (459)
.|++||+ .|++++..+|.++|+++++.|+++.++|+++++.|+|||+.+.. ..|+..+++.+++++..
T Consensus 2 ~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~a~~ 79 (397)
T cd07077 2 SAKNAQR--TLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGITAS 79 (397)
T ss_pred hHHHHHH--HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHHHHh
Confidence 5888999 99999999999999999999999999999999999999965432 13788899999999876
Q ss_pred hhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHc---C
Q 012658 181 ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA---G 257 (459)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~a---G 257 (459)
.++..+...+. ....+++++|+|||++|.|||||+. .++++++||++||+||+|||+.+|+++..+++++.++ |
T Consensus 80 ~~~~~~~~~~~--~~~~~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~~~g 156 (397)
T cd07077 80 VGHIQDVLLPD--NGETYVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADAAH 156 (397)
T ss_pred cCcccceEecC--CCceEEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHhhcC
Confidence 55554443332 3357889999999999999999999 9999999999999999999999999999999999987 9
Q ss_pred CCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHH
Q 012658 258 LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHY 337 (459)
Q Consensus 258 lP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~ 337 (459)
+|+++++++++.+.+.+..|..|+++|.|+||||+++++.+.+.+. .+|+++|+||++|+||++|||+|.|++.+++
T Consensus 157 ~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~---~~~~~~~~gg~~~~iv~~dad~~~a~~~~~~ 233 (397)
T cd07077 157 GPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSP---HIPVIGFGAGNSPVVVDETADEERASGSVHD 233 (397)
T ss_pred CCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCC---CCceEEecCCcceEEEcCCCCHHHHHHHHHH
Confidence 9999999999877788999999999999999999999999987662 5899999999999999999999999999999
Q ss_pred HhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCc
Q 012658 338 ALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE 417 (459)
Q Consensus 338 ~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~ 417 (459)
++|.| ||.|+++++||||+++||+|+++|++++.. +|++++.||.
T Consensus 234 ~~~~~-GQ~C~a~~~v~V~~~i~d~~~~~l~~~~~~----------------------------------~G~~~~~g~~ 278 (397)
T cd07077 234 SKFFD-QNACASEQNLYVVDDVLDPLYEEFKLKLVV----------------------------------EGLKVPQETK 278 (397)
T ss_pred hhccC-CccCCCCeEEEEehhhhHHHHHHHHHHHHh----------------------------------cCcCcCCCce
Confidence 99999 999999999999999999999999998864 5788887773
Q ss_pred ccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 418 RLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 418 ~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++|+.|| ++|.+++||+||||++|++|+|+
T Consensus 279 -----~~~~~pt------~~~~~~~~E~FgPvl~v~~~~~~ 308 (397)
T cd07077 279 -----PLSKETT------PSFDDEALESMTPLECQFRVLDV 308 (397)
T ss_pred -----eeEEecc------CCCChhhhhhhCceeEEEEEcch
Confidence 5788887 78999999999999999999986
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. |
| >cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-51 Score=418.70 Aligned_cols=284 Identities=52% Similarity=0.803 Sum_probs=266.5
Q ss_pred HHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCccc-
Q 012658 111 AARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA- 189 (459)
Q Consensus 111 ~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~- 189 (459)
.|++++. .|++++..+|.++|+++++.|.++.++|++++++|+|||+.++. .|+...++.+++++...++..+...
T Consensus 2 ~a~~a~~--~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~~~-~ev~~~~~~l~~~~~~~~~~~~~~~~ 78 (367)
T cd06534 2 AARAAFK--AWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEAL-GEVARAIDTFRYAAGLADKLGGPELP 78 (367)
T ss_pred hHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 5788898 99999999999999999999999999999999999999988865 5999999999999998887765332
Q ss_pred CCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCC
Q 012658 190 PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 269 (459)
Q Consensus 190 ~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~ 269 (459)
+...+...+.+++|+||+++|.|||+|+...++.+++||++||+||+|||+.+|.++..|+++|.++|+|+|++++++++
T Consensus 79 ~~~~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag~p~~~v~~~~~~ 158 (367)
T cd06534 79 SPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGG 158 (367)
T ss_pred ccCCCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcCCCcCeEEEEEcC
Confidence 23446678899999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred ChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCcccc
Q 012658 270 GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCA 349 (459)
Q Consensus 270 ~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a 349 (459)
+++.+..|..|+++|.|.||||+++++.|.+.+++ +++|+++|+||+|++||++|+|++.|++.+++++|.++||.|++
T Consensus 159 ~~~~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~-~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~~~~gq~C~s 237 (367)
T cd06534 159 GDEVGAALLSHPRVDKISFTGSTAVGKAIMKAAAE-NLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTA 237 (367)
T ss_pred chhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhc-CCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCC
Confidence 77788999999999999999999999999999987 68999999999999999999999999999999999999999999
Q ss_pred CceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecE
Q 012658 350 GSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPT 429 (459)
Q Consensus 350 ~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PT 429 (459)
+++||||++++|+|+++|+ |
T Consensus 238 ~~~v~v~~~~~~~f~~~l~------------------------------------------------------------t 257 (367)
T cd06534 238 ASRLLVHESIYDEFVEKLV------------------------------------------------------------T 257 (367)
T ss_pred CcEEEEcHHHHHHHHHhhc------------------------------------------------------------e
Confidence 9999999999999999998 7
Q ss_pred EEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 430 VFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 430 vl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
|+.+++++++++++|+|||+++|+.|+|+
T Consensus 258 l~~~~~~~~~~~~~E~fgPv~~v~~~~~~ 286 (367)
T cd06534 258 VLVDVDPDMPIAQEEIFGPVLPVIRFKDE 286 (367)
T ss_pred eeeCCCCCCccccCCccCceEEEEecCCH
Confidence 88889999999999999999999999975
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri |
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-51 Score=447.05 Aligned_cols=297 Identities=19% Similarity=0.179 Sum_probs=252.4
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhc---------------chH
Q 012658 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT---------------EVP 168 (459)
Q Consensus 104 dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~---------------ev~ 168 (459)
+++..++.|++||. .|+.++..+|.++|+++++.|++|.++|+ .++||++.++... |+.
T Consensus 287 ~~~~~~~~A~~A~~--~w~~~~~~~R~~~L~~la~~l~~~~eei~----~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~ 360 (715)
T TIGR01092 287 GERDMAVAARESSR--MLQALSSEQRKEILHDIADALEDNEDEIL----AENKKDVAAAQGAGYAASLVARLSMSPSKIS 360 (715)
T ss_pred HHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHHHHHHH----HHHhhhHHHHHhcCcchhHHHHHhCCHHHHH
Confidence 48888999999999 99999999999999999999999999997 4888888765431 477
Q ss_pred HHHHHHHHHHHhhhhhcCcccC---CCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHH
Q 012658 169 MTTRLFRYYAGWADKIQGLTAP---ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245 (459)
Q Consensus 169 ~~~~~l~~~a~~~~~~~~~~~~---~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~ 245 (459)
.++..++++++. .+..+...+ ...+...+..++|+|||++|+||| |+.+ ++++++||++||+||+|||+.+|++
T Consensus 361 ~~~~~l~~~a~~-~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t 437 (715)
T TIGR01092 361 SLAISLRQLAAM-EDPIGRVLKRTRIADNLILEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARS 437 (715)
T ss_pred HHHHHHHHHhcC-CCcccccccccccCCCceeEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHH
Confidence 788888888873 333333332 122344577899999999999999 9999 6899999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCC----cEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEE
Q 012658 246 ALYVSKLLHEAGLPPG----VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321 (459)
Q Consensus 246 ~~~l~~ll~~aGlP~g----~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~i 321 (459)
+..|++++.++ +|+| ++++|++ +++.+..|..|+++|+|+||||+.+|+.|++.++ +|+++|+|||||+|
T Consensus 438 ~~~l~~l~~~a-lp~g~~~~~~~~v~~-~~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~----~pv~lElgGk~p~i 511 (715)
T TIGR01092 438 NAILHKVITEA-IPIHVGKKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTK----IPVLGHADGICHVY 511 (715)
T ss_pred HHHHHHHHHHH-cCCCCCCcEEEEeCC-hHHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCC----CCEEEEcCCcceEE
Confidence 99999999999 9987 6899985 5677889999999999999999999999998753 89999999999999
Q ss_pred EccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHH
Q 012658 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 401 (459)
Q Consensus 322 V~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~ 401 (459)
|++|||++.|++.++.++|.+ ||.|++++|||||+++||+ | .+.++
T Consensus 512 V~~dADl~~A~~~i~~~~~~~-GQ~C~a~~rvlV~~~i~d~-------------------------~--------~~~~~ 557 (715)
T TIGR01092 512 VDKSASVDMAKRIVRDAKCDY-PAACNAMETLLVHKDLLRN-------------------------G--------LLDDL 557 (715)
T ss_pred ECCCCCHHHHHHHHHHHhCCC-CCccccCcEEEEehhhccc-------------------------h--------hHHHH
Confidence 999999999987777776655 9999999999999999985 1 26678
Q ss_pred HHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 402 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 402 i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++++++|++++ ||.... .|+. .++++|++++||+||||++|++|+|+
T Consensus 558 v~~~~~~Ga~l~-Gg~~~~---~~~~-----~~~~~~~i~~eE~FGPvl~v~~~~~~ 605 (715)
T TIGR01092 558 IDMLRTEGVTIH-GGPRFA---AYLT-----FNISETKSFRTEYSSLACTVEIVDDV 605 (715)
T ss_pred HHHHHHCCCEEE-CCcchh---heec-----cCCCCchhhhccccCceEEEEEECCH
Confidence 888888999985 775421 2442 23679999999999999999999985
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. |
| >cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-33 Score=287.96 Aligned_cols=179 Identities=20% Similarity=0.250 Sum_probs=160.5
Q ss_pred CceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCC----CcEEee--c
Q 012658 194 PYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPP----GVLNIV--S 267 (459)
Q Consensus 194 ~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~----g~v~vv--~ 267 (459)
+...++.++|+||+++|+|||+|+ ..++.+++||++||++|+|||+.+|.++..|.++|.++ +|+ +.++++ +
T Consensus 103 ~~~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~~l~~~-~p~~~~~~~~~vv~~~ 180 (422)
T cd07080 103 GRGGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTATALLRSLADV-DPNHPLTDSISVVYWP 180 (422)
T ss_pred CCCCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHHHHHHHHHHhc-CCCCcccceEEEEEec
Confidence 445678899999999999999999 79999999999999999999999999999999999999 787 888998 4
Q ss_pred CCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCc-EEEccCC----CHHHHHHHHHHHhhcc
Q 012658 268 GYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSP-FIVCEDA----DVDKAAELAHYALFFN 342 (459)
Q Consensus 268 g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p-~iV~~dA----Dld~aa~~i~~~~~~~ 342 (459)
|.+.+++..|..++ |.|+||||+++++.|++.++. + +.++|+|||++ +|+.+++ |++.+++.+++++|.|
T Consensus 181 g~~~~~~~~l~~~~--D~i~~~Gs~~~~~~i~~~a~~-~--~~~Le~Ggk~s~~vi~~~a~~~~dl~~aa~~~a~~~~~~ 255 (422)
T cd07080 181 GGDAELEERILASA--DAVVAWGGEEAVKAIRSLLPP-G--CRLIDFGPKYSFAVIDREALESEKLAEVADALAEDICRY 255 (422)
T ss_pred CCchHHHHHHHHhC--CEEEEeCCHHHHHHHHHhCCC-C--CeeeecCCceeEEEecHHhhccccHHHHHHHHHHHHHHH
Confidence 65666889999887 999999999999999998874 4 56999999955 5555568 9999999999999999
Q ss_pred CCCccccCceeEeeCcc---hHHHHHHHHHHHHhhccCCC
Q 012658 343 QGQCCCAGSRTFVHESV---YDQFVEKANALAMKRVVGDP 379 (459)
Q Consensus 343 ~GQ~C~a~~~v~V~e~v---~d~f~~~l~~~~~~~~vG~p 379 (459)
+||.|+|+++||||+++ +++|.++|+++++++.-..|
T Consensus 256 ~gQ~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~p 295 (422)
T cd07080 256 DQQACSSPQVVFVEKDDDEELREFAEALAAALERLPRRYP 295 (422)
T ss_pred hhhhccCCeEEEEECCCCchHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999 99999999999998865444
|
Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN. |
| >COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.90 E-value=3e-22 Score=195.97 Aligned_cols=261 Identities=20% Similarity=0.246 Sum_probs=213.6
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHH------cCCChhhhhhc-------chHH
Q 012658 103 EDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWD------NGKPFEQSAQT-------EVPM 169 (459)
Q Consensus 103 ~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e------~Gkp~~~a~~~-------ev~~ 169 (459)
.++.+..+.|++|.. ....++..+|.+.|.++++.|+.+.+++.++...| +|.+ ++... .+..
T Consensus 3 ~~~~~~~~~Ak~A~~--~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~--~~m~DRL~L~~~Ri~~ 78 (417)
T COG0014 3 SELEELGKRAKAASR--KLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLS--EAMLDRLALTPSRIEA 78 (417)
T ss_pred hHHHHHHHHHHHHHH--HHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCc--HHHHHHHcCCHHHHHH
Confidence 356677788888888 88999999999999999999999999999887765 3433 22111 2344
Q ss_pred HHHHHHHHHHhhhhhcCcc--cCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHH
Q 012658 170 TTRLFRYYAGWADKIQGLT--APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247 (459)
Q Consensus 170 ~~~~l~~~a~~~~~~~~~~--~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~ 247 (459)
.++.++..+.+.|++.... ...+.+...+..+.|+||+++| |......+....+.+|.+||+||||.+..+..+..
T Consensus 79 ma~gl~~Va~L~DPvGev~~~~~~~nGL~i~~~rvPLGVigvI--YEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~ 156 (417)
T COG0014 79 MADGLRQVAALPDPVGEVIDGWTLPNGLQIYRVRVPLGVIGVI--YESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNA 156 (417)
T ss_pred HHHHHHHHhcCCCchHhhhccccCCCCCEEEEEEccceEEEEE--EecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHH
Confidence 4445555555544432211 1245678889999999999999 77777888888999999999999999999999999
Q ss_pred HHHHHH----HHcCCCCCcEEeecCCC-hhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEE
Q 012658 248 YVSKLL----HEAGLPPGVLNIVSGYG-PTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 322 (459)
Q Consensus 248 ~l~~ll----~~aGlP~g~v~vv~g~~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV 322 (459)
.+.+++ .++|+|++.||+++..+ .++.+.|.....||.|...|+..--+.+.+. ...||+-.+-|+|.++|
T Consensus 157 ai~~~i~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~----a~vPVi~~~~G~CHiyv 232 (417)
T COG0014 157 AIVEVIQEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVEN----ATVPVIEHGVGNCHIYV 232 (417)
T ss_pred HHHHHHHHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhC----CcCCEEecCcceEEEEe
Confidence 888765 56799999999998744 4455666667779999999999988887766 35899999999999999
Q ss_pred ccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhh
Q 012658 323 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 374 (459)
Q Consensus 323 ~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~ 374 (459)
+.+||+|.|.+.++.++....+ .|++.+.++||+.+.++|+.+|.+.+...
T Consensus 233 d~~ADld~A~~ii~nAKtqrPs-~CNA~EtLLVh~~ia~~fLp~l~~~l~~~ 283 (417)
T COG0014 233 DESADLDKALKIIVNAKTQRPS-VCNAAETLLVHRAIAKSFLPKLANALQEA 283 (417)
T ss_pred cccCCHHHHHHHHHcccCCCCc-ccchHHHHHcCHHHHHHhHHHHHHHHHhc
Confidence 9999999999999999999998 99999999999999999999999988754
|
|
| >KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.5e-18 Score=162.10 Aligned_cols=254 Identities=22% Similarity=0.239 Sum_probs=194.5
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHH------HHcCCChhhhhh-----cchHHHHHH
Q 012658 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALET------WDNGKPFEQSAQ-----TEVPMTTRL 173 (459)
Q Consensus 105 v~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~------~e~Gkp~~~a~~-----~ev~~~~~~ 173 (459)
+++..+.||.++. ..+.++.++|.++|.++++.|..+..++.++.. .+.|..-..-.+ +.+......
T Consensus 2 ~e~~a~~aR~a~r--~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~GL~~sll~RL~l~~~K~~sl~~g 79 (433)
T KOG4165|consen 2 VEEMAENAREAGR--ILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAGLAESLLKRLDLSPGKISSLAAG 79 (433)
T ss_pred HHHHHHHHHHHhh--HHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcCccHHHHHHhcCChHHHHHHHHH
Confidence 3455678888888 889999999999999999999988777766443 345532111100 112222233
Q ss_pred HHHHHHhhhhhcCccc---CCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHH
Q 012658 174 FRYYAGWADKIQGLTA---PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVS 250 (459)
Q Consensus 174 l~~~a~~~~~~~~~~~---~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~ 250 (459)
++..+. .....|..+ ....+...+....|+||.++| |....-......+.|++.||.+++|....+..+...|.
T Consensus 80 ~~~ia~-~edpvGRVl~~~~ladgL~L~qvt~PiGvLLVI--FESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~ 156 (433)
T KOG4165|consen 80 LRQIAE-LEDPVGRVLKKTRLADGLELEQVTVPIGVLLVI--FESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALH 156 (433)
T ss_pred HHHHHh-cccchhhheeeeeccCCceEEEeeccceEEEEE--eccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHH
Confidence 333333 111122221 134567777888999999999 66666677777788999999999999999999999998
Q ss_pred HHHHHc----CCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEccCC
Q 012658 251 KLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDA 326 (459)
Q Consensus 251 ~ll~~a----GlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~dA 326 (459)
++..++ |.|.+.|++|.. ..++.+.|..+.-||.|...||+...+.|... ..+||..+-.|.+.++|+.||
T Consensus 157 ~~v~~al~~~~~~~~aV~LV~s-REev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~----tkIPVLGHA~GichvYvd~da 231 (433)
T KOG4165|consen 157 KLVQEALGTHGGPGKAVQLVTS-REEVSDLLKLDDYIDLVIPRGSSDLVRSIKDT----TKIPVLGHAEGICHVYVDKDA 231 (433)
T ss_pred HHHHHHhhhccCchhhhhheec-HHHHHHHhhhhhheeEEecCCcHHHHHHHhhc----ccCcccccccceeEEEecccc
Confidence 887765 779999999997 56788888888889999999999999988765 458999999999999999999
Q ss_pred CHHHHHHHHHHHhhccCCCccccCceeEeeCc-----chHHHHHHHHH
Q 012658 327 DVDKAAELAHYALFFNQGQCCCAGSRTFVHES-----VYDQFVEKANA 369 (459)
Q Consensus 327 Dld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~-----v~d~f~~~l~~ 369 (459)
|+++|.+.+..+++.+.. .|++.+.++||++ .++++...|++
T Consensus 232 d~~kA~riv~DaK~dYPA-aCNAmETLLIh~dl~~~~~~~~l~~~l~~ 278 (433)
T KOG4165|consen 232 DLDKAKRIVRDAKCDYPA-ACNAMETLLIHKDLEQSPFFDDLINMLKE 278 (433)
T ss_pred CHHHHHHHHhcccCCCch-hhhhHHHHhccHhhhhcchHHHHHHHHHh
Confidence 999999999999998876 9999999999996 44555555543
|
|
| >PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.3e-13 Score=141.06 Aligned_cols=173 Identities=20% Similarity=0.205 Sum_probs=143.4
Q ss_pred EEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCC----CcEEee--cCCC
Q 012658 197 VQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPP----GVLNIV--SGYG 270 (459)
Q Consensus 197 ~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~----g~v~vv--~g~~ 270 (459)
.+..+.|.|++++|.|.|.|+..+.. ++.+|++||..|+|+|...+..+..|.+.|.+. .|. ..+.++ ++.+
T Consensus 81 ~~~~~~p~g~v~Hi~agNvp~~~~~S-~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~-~~~~~l~~~i~v~~~~~~d 158 (399)
T PF05893_consen 81 GYVRAFPRGLVFHIAAGNVPLVGFYS-LVRGLLSGNANIVKLSSRDPFLAPALLRSLAEI-DPEHPLADSIAVVYWPGGD 158 (399)
T ss_pred chhhccCCceEEEEcCCCccchHHHH-HHHHHHhCCceEEECCCCchhHHHHHHHHHHhh-CccchhhhcEEEEEecCCc
Confidence 66789999999999999999977665 677888999999999999999999999999886 443 456666 4556
Q ss_pred hhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccC
Q 012658 271 PTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAG 350 (459)
Q Consensus 271 ~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~ 350 (459)
.++...+.+ ..|.++.+||.++.+.|.+.+. ..++.+....-.+.++|..+++++.+++.+....+.+.+|.|.|+
T Consensus 159 ~~~~~~~~~--~~D~vv~wGgd~ti~~ir~~~~--~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCsSp 234 (399)
T PF05893_consen 159 EELEEALSQ--QADAVVAWGGDETIRAIRQPLP--PGARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACSSP 234 (399)
T ss_pred hHHHHHHHH--HCCEEEEeCCHHHHHHHHHHcC--CCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccCCC
Confidence 667777763 5899999999999999988443 345666666667778888888999999999999999999999999
Q ss_pred ceeEee---CcchHHHHHHHHHHHHhhc
Q 012658 351 SRTFVH---ESVYDQFVEKANALAMKRV 375 (459)
Q Consensus 351 ~~v~V~---e~v~d~f~~~l~~~~~~~~ 375 (459)
+.|||. +.-.++|.++|.+++.+..
T Consensus 235 ~~ifv~~g~~~~~~~f~~~L~~~L~~~~ 262 (399)
T PF05893_consen 235 QVIFVETGDGDSVEEFAERLAEALERAA 262 (399)
T ss_pred eEEEEECCCcccHHHHHHHHHHHHHHHH
Confidence 999999 3445888889888877653
|
The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.75 E-value=3.8e-08 Score=112.92 Aligned_cols=111 Identities=17% Similarity=0.083 Sum_probs=88.4
Q ss_pred cccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEee
Q 012658 187 LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIV 266 (459)
Q Consensus 187 ~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv 266 (459)
..+|.+.|+.+..+..|+|+++|++||| ..++.+++.||++||+||+||++.++. .+ +.+|..+.+.+
T Consensus 1062 ~~LPGPTGEsN~L~l~~RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~-------~~--~~Lp~~~~~~~ 1129 (1208)
T PRK11905 1062 QELPGPTGESNLLSLHPRGRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAA-------AL--ADLPGLVAARI 1129 (1208)
T ss_pred ccCCCCCCcceeEEecCCceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHH-------HH--HhCcccccccc
Confidence 3578888999999999999999999999 557889999999999999999998752 11 12565555544
Q ss_pred cCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCC--CceEEec
Q 012658 267 SGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL--KPVTLEL 314 (459)
Q Consensus 267 ~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~--~pv~lel 314 (459)
.++..+..++.|+.|.|+|++++.+.|.+..+++.. .|++.|.
T Consensus 1130 -----~~~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G~Ivpliaet 1174 (1208)
T PRK11905 1130 -----DWTQDWEADDPFAGALLEGDAERARAVRQALAARPGAIVPLIAAE 1174 (1208)
T ss_pred -----ccccccccCCcccEEEEeCCHHHHHHHHHHHHhCCCCcceEEecC
Confidence 234577788889999999999999999999998652 3444444
|
|
| >KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.39 E-value=7.1e-07 Score=75.40 Aligned_cols=90 Identities=19% Similarity=0.115 Sum_probs=69.2
Q ss_pred hHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHH-hCCCeEEeCCcccCCCCceEecEEEeeCCCCC
Q 012658 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV-DGGAKLETGGERLGAKGYYIKPTVFTGVKVLI 438 (459)
Q Consensus 360 ~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~-~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~ 438 (459)
.....+.|+++.+.+++-+-..+++|. .+...+|.++|++-. ..|-.+..-|. .+|+|+.||++. |+|+|
T Consensus 8 aksW~~~lve~ak~l~v~~g~kp~tD~-----~a~~~ri~~liqS~~~~~~r~~yl~~y---a~~~f~~~tiLs-vtP~m 78 (157)
T KOG2449|consen 8 AKSWHPTLVEDAKVLKVNAGEKPQTDK-----YAPKVRIDKLIQSEDPLDGRFIYLPGY---AEGNFVGPTILS-VTPNM 78 (157)
T ss_pred hhhhhHHHHHhhhheEeccCCCCCccc-----hhHHHHHHHHhcCcCccCCceEEeecc---ccCCcccceEEE-ecCCc
Confidence 356777888899999998888888887 556678888888621 12444443333 468999999998 99999
Q ss_pred CCcCcCCCcceEEEEecCCC
Q 012658 439 LISPASISPNILHTFNGENF 458 (459)
Q Consensus 439 ~i~~~EifgPvl~v~~~~~~ 458 (459)
.++.|||||||+.+..-+++
T Consensus 79 s~ykeeI~gpVlv~l~~~tl 98 (157)
T KOG2449|consen 79 SCYKEEIFGPVLVRLETETL 98 (157)
T ss_pred ceeHhhhhcceEEEEeecCC
Confidence 99999999999998776654
|
|
| >PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0021 Score=59.57 Aligned_cols=119 Identities=16% Similarity=0.123 Sum_probs=80.4
Q ss_pred CcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHH
Q 012658 318 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 397 (459)
Q Consensus 318 ~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~ 397 (459)
.-+||++|.|++.|+.-++.+.-.--| ..+.-.|+|||++.|+|+++++.+++. +++.+ .+...+.+
T Consensus 6 ~lMIvfe~GDlnsA~~~L~~sl~~Pf~--~~~VatVlVqEsireefi~rvr~~m~p------l~~~v-----a~Hpny~r 72 (215)
T PF07368_consen 6 QLMIVFEDGDLNSAMHYLLESLHNPFA--PGAVATVLVQESIREEFIERVRSRMKP------LSPQV-----ANHPNYLR 72 (215)
T ss_pred eEEEEEeCCCHHHHHHHHHHHHhCccc--CCcEEEEEEeHHHHHHHHHHHHHhCcc------CChhh-----ccCcHHHH
Confidence 458999999999999999999865444 456778999999999999999988763 33332 23334555
Q ss_pred HHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCC
Q 012658 398 ILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGEN 457 (459)
Q Consensus 398 i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~ 457 (459)
-.+.|+ .-+++++.++... .-..-.|.++.|.+.+.. -+ -..+|+.+.-+++
T Consensus 73 sl~~i~---~l~~~~I~~~~~~--~~~~aSPilV~d~~h~~f--g~-~PTgViTlhtFRt 124 (215)
T PF07368_consen 73 SLKKIK---CLNAKTIVADFEN--VPPPASPILVCDFTHSYF--GD-GPTGVITLHTFRT 124 (215)
T ss_pred HHHHHH---hcCCeEEEecccC--CCCCCCCEEEcCCCHHHc--CC-CCCeEEEEEccCC
Confidence 444444 4689999884321 123346888888766422 22 3345666655544
|
The function of this family is unknown. |
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0041 Score=72.43 Aligned_cols=104 Identities=13% Similarity=0.061 Sum_probs=79.1
Q ss_pred cccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEee
Q 012658 187 LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIV 266 (459)
Q Consensus 187 ~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv 266 (459)
..+|++.|+.+..+..|+|+|+|+++-. ...+.+++.+|++||.+|+..++.. .. ++ +++|+.+.+.+
T Consensus 1171 ~~LPGPTGE~N~l~l~pRg~vLcl~~~~---~~~~~Ql~Aala~Gn~~v~~~~~~~---~~----~~--~~Lp~~v~~~v 1238 (1318)
T PRK11809 1171 RLLPGPTGERNTYTLLPRERVLCLADTE---QDALTQLAAVLAVGSQALWPDDALH---RA----LV--AALPAAVQARI 1238 (1318)
T ss_pred ccCCCCCCCcceeeccCCCcEEEeCCCH---HHHHHHHHHHHHhCCEEEEeCCchh---HH----HH--HhccHHHHhHh
Confidence 3578888999999999999999998733 3578899999999999988644432 12 22 46898888876
Q ss_pred cCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcC
Q 012658 267 SGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306 (459)
Q Consensus 267 ~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~ 306 (459)
.-. . ........++.|.|.|+.+..+.+.++.++|.
T Consensus 1239 ~~~---~-~~~~~~~~~~avl~~G~~~~l~~~~~~LA~R~ 1274 (1318)
T PRK11809 1239 QLA---K-DWQLADQPFDAVLFHGDSDQLRALCEQVAQRD 1274 (1318)
T ss_pred hhc---c-ccccccCCccEEEEeCCHHHHHHHHHHHhcCC
Confidence 321 1 12223356999999999999999999999855
|
|
| >COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.70 E-value=27 Score=36.01 Aligned_cols=163 Identities=18% Similarity=0.170 Sum_probs=92.0
Q ss_pred CCceEEEEEccceEEEEEcC---CCchHHhhHHHHHHHHhcCCeEEe--ecCCCchHHHHHHHHHHHHcCCCCCcEEeec
Q 012658 193 GPYHVQTLHEPIGVAGQIIP---WNFPLLMFAWKVGPALACGNTIVL--KTAEQTPLSALYVSKLLHEAGLPPGVLNIVS 267 (459)
Q Consensus 193 ~~~~~~~~~~P~GVv~~i~p---~n~P~~~~~~~l~~ALaaGN~VVl--Kps~~~p~~~~~l~~ll~~aGlP~g~v~vv~ 267 (459)
.|......+.|+--|++-.| .-||-..++ ...||-.+|+.=|+ -|+...- .+..+.-....+|+.+ |..
T Consensus 106 ~Gv~~g~~~~Pi~~VGlYVPGG~A~ypStvLM-~avPAkvAGv~~Iv~~tPp~~~g-v~p~iL~AA~~~Gv~e----Iy~ 179 (425)
T COG0141 106 PGVVLGQRWRPIERVGLYVPGGKAAYPSTVLM-NAVPAKVAGVEEIVVVTPPPKDG-VNPEILAAARLAGVDE----VYK 179 (425)
T ss_pred CCcEEEEEEEEhhheEEEccCCCcCChHHHHH-hhccHhhcCCceEEEECCCCCCC-CCHHHHHHHHHhCcHH----HHH
Confidence 46677889999999999888 555554444 47899999986543 4554422 2222223334445432 222
Q ss_pred CCChhHHHHHHcC----CCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEE-ccCCCHHHHHHHHHHHhhcc
Q 012658 268 GYGPTAGAALASH----MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV-CEDADVDKAAELAHYALFFN 342 (459)
Q Consensus 268 g~~~~~~~~L~~~----~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV-~~dADld~aa~~i~~~~~~~ 342 (459)
-.|.+.-.+|.-. ++||+|+=.|+.=+... +.... +..-+=+..|-..-+|| ++++|.+..+..++.-+=..
T Consensus 180 vGGAQAIAAlAYGTetV~~VdkIvGPGN~yVtaA--Kr~v~-g~V~ID~~AGPSEvlViAD~ta~p~~vA~DLLsQAEHd 256 (425)
T COG0141 180 VGGAQAIAALAYGTETVPKVDKIVGPGNAYVTAA--KRLVS-GVVGIDMIAGPSEVLVIADETANPDFVAADLLSQAEHD 256 (425)
T ss_pred ccCHHHHHHHHccCCcCCccCeeeCCCcHHHHHH--HHHhh-CCcccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhhcC
Confidence 2255555666665 88999999888755321 11111 22222222233334444 44599999988877655443
Q ss_pred CCCccccCceeEeeCcchHHHHHHHHHHH
Q 012658 343 QGQCCCAGSRTFVHESVYDQFVEKANALA 371 (459)
Q Consensus 343 ~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~ 371 (459)
. ..+.|+|..+ ++|.++..+++
T Consensus 257 ~-----~a~aiLvT~s--~~la~~v~~~v 278 (425)
T COG0141 257 P-----DAQAILVTDS--EELAEAVEAAV 278 (425)
T ss_pred C-----CceEEEEeCc--HHHHHHHHHHH
Confidence 2 2455677664 34444444433
|
|
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=89.10 E-value=4 Score=43.15 Aligned_cols=110 Identities=17% Similarity=0.182 Sum_probs=75.0
Q ss_pred ccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeec
Q 012658 188 TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVS 267 (459)
Q Consensus 188 ~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~ 267 (459)
.+|.+.+..++....|.|-|+++.+ +....+.+++.+|+.||.+++-+.... +.++. .+|..+-..+.
T Consensus 628 ~LpGptGErN~~~l~pr~rvl~~~~---~~~~~~~ql~a~la~G~~~v~~~~~~~-------aa~~~--~l~~~v~~~~~ 695 (769)
T COG4230 628 LLPGPTGERNTYTLHPRGRVLCVAG---DEQDLLTQLAAVLAVGNQVVIPEDSGL-------AALLK--DLPSAVASRIQ 695 (769)
T ss_pred ecCCCcccceeecccCCccEEEeCC---CHHHHHHHHHHHHhcCCeEEecCcchH-------HHHHH--hchhhhhhhee
Confidence 3567778899999999999999866 677888899999999999998665432 22222 24544322222
Q ss_pred CCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecC
Q 012658 268 GYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG 315 (459)
Q Consensus 268 g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelg 315 (459)
-.+ +. ...-.++.+.|-|..+-.+.+.+..+. ...|++.-.+
T Consensus 696 ~~~----~~-~~~~~~~~vl~~gd~~~~r~~~~~iA~-~~Gpiv~~~~ 737 (769)
T COG4230 696 VAK----DW-TADIPFDAVLFHGDSDRLRALCEAIAA-RDGPIVSVQG 737 (769)
T ss_pred ecc----ch-hhccceeeEEecCCHHHHHHHHHHHhc-CCCCeEEeec
Confidence 111 12 333467999999999999999887776 3455544433
|
|
| >PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine | Back alignment and domain information |
|---|
Probab=88.43 E-value=33 Score=35.42 Aligned_cols=166 Identities=19% Similarity=0.109 Sum_probs=75.9
Q ss_pred CCceEEEEEccceEEEEEcC-CCchHH-hhHHHHHHHHhcCCeEEe--ecCCCchHHHHHHHHHHHHcCCCCCcEEeecC
Q 012658 193 GPYHVQTLHEPIGVAGQIIP-WNFPLL-MFAWKVGPALACGNTIVL--KTAEQTPLSALYVSKLLHEAGLPPGVLNIVSG 268 (459)
Q Consensus 193 ~~~~~~~~~~P~GVv~~i~p-~n~P~~-~~~~~l~~ALaaGN~VVl--Kps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g 268 (459)
.|......+.|+.-|++-.| ..+|+. +.+..++||-.+|..=|+ -|+...-.....+.-..+.+|+.+ +..-
T Consensus 96 ~G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~TPp~~~G~i~p~vL~Aa~~~Gv~e----vy~v 171 (412)
T PF00815_consen 96 PGVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPPKDGKINPAVLAAAHLAGVDE----VYKV 171 (412)
T ss_dssp TTEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE-SS------HHHHHHHHHTT-SE----EEE-
T ss_pred CCcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEcCCCccCCCCHHHHHHHHHcCCCE----EEec
Confidence 36667788999999999988 445553 335568899999986554 444432233334445566677742 2222
Q ss_pred CChhHHHHHHc----CCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCc--EEEccCCCHHHHHHHHHHHhhcc
Q 012658 269 YGPTAGAALAS----HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSP--FIVCEDADVDKAAELAHYALFFN 342 (459)
Q Consensus 269 ~~~~~~~~L~~----~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p--~iV~~dADld~aa~~i~~~~~~~ 342 (459)
.|.+.-.+|.- -|+||+|+=.|+.=+...=..... ..-+ =-+.|.+= +|-+++||.+..+..++.-+=..
T Consensus 172 GGaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g---~V~I-D~~AGPSEv~ViAD~~A~p~~vAaDLLaQAEHd 247 (412)
T PF00815_consen 172 GGAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFG---DVGI-DMIAGPSEVLVIADETANPEFVAADLLAQAEHD 247 (412)
T ss_dssp -HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHH---S-EE-S------EEEEEE-TTS-HHHHHHHHHHHHTT-
T ss_pred ccHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcC---Cccc-CCCCCCCceEEEECCCCCHHHHHHHHHHHhccC
Confidence 24444444443 488999999998755332111111 1111 11233333 33356799999888877665444
Q ss_pred CCCccccCceeEeeCcchHHHHHHHHHHHHh
Q 012658 343 QGQCCCAGSRTFVHESVYDQFVEKANALAMK 373 (459)
Q Consensus 343 ~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~ 373 (459)
.. .+.++|..+ +++.++..+.+.+
T Consensus 248 ~~-----a~~vLvt~s--~~la~~V~~~v~~ 271 (412)
T PF00815_consen 248 PD-----AQAVLVTTS--EELAEAVEAEVER 271 (412)
T ss_dssp TT------EEEEEES---HHHHHHHHHHHHH
T ss_pred CC-----CceEEEECC--HHHHHHHHHHHHH
Confidence 33 234666655 4455555444443
|
In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B. |
| >PRK13769 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=83.33 E-value=56 Score=33.25 Aligned_cols=164 Identities=16% Similarity=0.151 Sum_probs=95.8
Q ss_pred CCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEee-cCCCchHHHHHHHHHHHHcCCCCCcEEeecCCCh
Q 012658 193 GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLK-TAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGP 271 (459)
Q Consensus 193 ~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlK-ps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~ 271 (459)
.|.....++.|+-.|++-.|.-||- +.+...+||-.+|+.=|+- .++.. .....|+ ..+.+|+.+ +..-.|.
T Consensus 83 ~Gv~~g~~~~Pi~rvG~YVPa~~pS-tvLM~~iPAkvAGV~~Iv~~TPp~~-i~p~vL~-aa~~~Gv~e----Iy~vGGA 155 (368)
T PRK13769 83 GGVLRSVFWKPVRRAALYVPARYVS-TLVMLAVPARAAGVEEIYVVTPPRG-VTGELLA-VAKELGVKG----VLAIGGP 155 (368)
T ss_pred CCeEEEEEEeeeeeeEEEeccchHH-HHHHhhccHhhcCCCeEEEeCCCCC-CCHHHHH-HHHHcCCCe----eecccCH
Confidence 4566678899999999999965553 3455689999999876543 22221 2233333 456666642 3322244
Q ss_pred hHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCc
Q 012658 272 TAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGS 351 (459)
Q Consensus 272 ~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~ 351 (459)
+.-.++...-+||+|+=.|+.=+...=.... +..-+=+--|-.--+||-+++|.+..+..++.-+=... ..+
T Consensus 156 QAIAa~a~gt~VDkIvGPGN~yV~~AK~~v~---g~V~ID~~AGPSEvlViAD~a~p~~vAaDLLaQAEH~~-----~a~ 227 (368)
T PRK13769 156 HGLAYAVFHMGVDMVAGPGGLYVQAAKYVLS---QYVGIDGIEGPTELVVYAEGVPPEVAVRGALAQLEHGP-----TSF 227 (368)
T ss_pred HHHHHHhcCCCcCEEECCCcHHHHHHHHHHh---CCcCCCCcCCCcceEEEcCCCCHHHHHHHHHHHhhcCC-----CCc
Confidence 5445666666999999999875533211111 21222122244555677777999988877765543322 234
Q ss_pred eeEeeCcchHHHHHHHHHHHHh
Q 012658 352 RTFVHESVYDQFVEKANALAMK 373 (459)
Q Consensus 352 ~v~V~e~v~d~f~~~l~~~~~~ 373 (459)
.++|..+ +++.++..+++.+
T Consensus 228 ~iLvT~s--~~la~~V~~~v~~ 247 (368)
T PRK13769 228 AYLLSTD--AELLKAAEEIYRR 247 (368)
T ss_pred EEEEECC--HHHHHHHHHHHHH
Confidence 5666554 4555555555443
|
|
| >COG1438 ArgR Arginine repressor [Transcription] | Back alignment and domain information |
|---|
Probab=80.41 E-value=12 Score=33.01 Aligned_cols=136 Identities=19% Similarity=0.168 Sum_probs=79.9
Q ss_pred HHHHHHHHHHH----cHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEE
Q 012658 132 IILRFADLLER----HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA 207 (459)
Q Consensus 132 iL~~~a~~l~~----~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv 207 (459)
.++.+.+.+.+ -++||.+.+..+ |-.+.++. .++..+++..-.+|...+...|....+.++-
T Consensus 7 R~~~Ik~iI~~~~i~TQ~Elv~~L~~~-Gi~vTQaT-------------vSRDlkelglvKv~~~~g~~~Y~l~~~~~~~ 72 (150)
T COG1438 7 RLELIKEIITEEKISTQEELVELLQEE-GIEVTQAT-------------VSRDLKELGLVKVRNEKGTYVYSLPAELGVP 72 (150)
T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHc-CCeEehHH-------------HHHHHHHcCCEEecCCCCcEEEEeCCccCCC
Confidence 34444455544 458888877653 43345542 1222334444455555555555544444432
Q ss_pred EEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEE
Q 012658 208 GQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLA 287 (459)
Q Consensus 208 ~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ 287 (459)
.. ..+...+...+...=-.||-+|+|..|. .+..++.++...+.| +.+..+.|++ + .++
T Consensus 73 ~~----~~~~~~~~~~v~~vd~~~~~ivlkT~PG---~A~~ia~~lD~~~~~-eIlGTIaGdD-T------------ilV 131 (150)
T COG1438 73 PT----SKLKRYLKDLVLSIDRNGNLIVLKTSPG---AAQLIARLLDSLAKD-EILGTIAGDD-T------------ILV 131 (150)
T ss_pred ch----hhHHHHHHHHheeeccCCcEEEEEeCCc---hHHHHHHHHHhcCch-hhheeeeCCC-e------------EEE
Confidence 21 2222334444555566899999998865 788999999998887 8899888842 1 244
Q ss_pred eeCChHHHHHHHHHH
Q 012658 288 FTGSTTTGKIVLQLA 302 (459)
Q Consensus 288 ftGs~~~g~~i~~~~ 302 (459)
.+-+...++.+.+..
T Consensus 132 i~r~~~~a~~l~~~l 146 (150)
T COG1438 132 ICRSEETAKELYEEL 146 (150)
T ss_pred EecCchhHHHHHHHH
Confidence 455666677666554
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 459 | ||||
| 1ag8_A | 499 | Aldehyde Dehydrogenase From Bovine Mitochondria Len | 1e-132 | ||
| 1o05_A | 500 | Apo Form Of Human Mitochondrial Aldehyde Dehydrogen | 1e-131 | ||
| 2onn_A | 500 | Arg475gln Mutant Of Human Mitochondrial Aldehyde De | 1e-131 | ||
| 1cw3_A | 494 | Human Mitochondrial Aldehyde Dehydrogenase Complexe | 1e-130 | ||
| 1zum_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 1e-130 | ||
| 3n81_A | 500 | T244a Mutant Of Human Mitochondrial Aldehyde Dehydr | 1e-130 | ||
| 1nzw_A | 500 | Cys302ser Mutant Of Human Mitochondrial Aldehyde De | 1e-130 | ||
| 3n80_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase, Apo For | 1e-129 | ||
| 3inl_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 1e-129 | ||
| 4fr8_A | 500 | Crystal Structure Of Human Aldehyde Dehydrogenase-2 | 1e-128 | ||
| 1bi9_A | 499 | Retinal Dehydrogenase Type Two With Nad Bound Lengt | 1e-128 | ||
| 1bxs_A | 501 | Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad | 1e-122 | ||
| 1o9j_A | 501 | The X-Ray Crystal Structure Of Eta-Crystallin Lengt | 1e-116 | ||
| 2o2p_A | 517 | Crystal Structure Of The C-Terminal Domain Of Rat 1 | 5e-92 | ||
| 3rhm_A | 517 | Crystal Structure Of The E673q Mutant Of C-Terminal | 1e-91 | ||
| 3rhj_A | 517 | Crystal Structure Of The E673a Mutant Of The C-Term | 3e-91 | ||
| 4gnz_A | 517 | Crystal Structure Of The C707s Mutant Of C-terminal | 1e-90 | ||
| 3rhr_A | 517 | Crystal Structure Of The C707a Mutant Of The C-Term | 1e-90 | ||
| 3rhl_A | 517 | Crystal Structure Of The E673aC707A DOUBLE MUTANT O | 5e-90 | ||
| 2wme_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 2e-79 | ||
| 2wox_A | 489 | Betaine Aldehyde Dehydrogenase From Pseudomonas Aer | 2e-79 | ||
| 2xdr_A | 489 | Crystallographic Structure Of Betaine Aldehyde Dehy | 1e-78 | ||
| 4a0m_A | 496 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 2e-78 | ||
| 3zqa_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 2e-78 | ||
| 2wme_C | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 3e-78 | ||
| 2d4e_A | 515 | Crystal Structure Of The Hpcc From Thermus Thermoph | 4e-74 | ||
| 3iwj_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 2 | 1e-70 | ||
| 3iwk_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1 | 5e-69 | ||
| 3ed6_A | 520 | 1.7 Angstrom Resolution Crystal Structure Of Betain | 5e-68 | ||
| 3jz4_C | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 8e-67 | ||
| 3jz4_A | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 8e-67 | ||
| 4i8p_A | 520 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1a | 1e-66 | ||
| 4i9b_A | 517 | Structure Of Aminoaldehyde Dehydrogenase 1 From Sol | 4e-66 | ||
| 3u4j_A | 528 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 2e-65 | ||
| 4i8q_A | 514 | Structure Of The Aminoaldehyde Dehydrogenase 1 E260 | 2e-65 | ||
| 1a4s_A | 503 | Betaine Aldehyde Dehydrogenase From Cod Liver Lengt | 1e-64 | ||
| 3r31_A | 517 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 4e-62 | ||
| 3ifg_A | 484 | Crystal Structure Of Succinate-Semialdehyde Dehydro | 5e-61 | ||
| 3ek1_A | 504 | Crystal Structure Of Aldehyde Dehydrogenase From Br | 7e-61 | ||
| 1wnb_A | 495 | Escherichia Coli Ydcw Gene Product Is A Medium-Chai | 1e-60 | ||
| 2imp_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 1e-59 | ||
| 2opx_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 1e-59 | ||
| 2hg2_A | 479 | Structure Of Lactaldehyde Dehydrogenase Length = 47 | 2e-59 | ||
| 4dal_A | 498 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 2e-59 | ||
| 3i44_A | 497 | Crystal Structure Of Aldehyde Dehydrogenase From Ba | 6e-58 | ||
| 3ty7_A | 478 | Crystal Structure Of Aldehyde Dehydrogenase Family | 2e-56 | ||
| 2w8n_A | 487 | The Crytal Structure Of The Oxidized Form Of Human | 4e-55 | ||
| 3k2w_A | 497 | Crystal Structure Of Betaine-Aldehyde Dehydrogenase | 3e-54 | ||
| 2w8p_A | 487 | The Crystal Structure Of Human C340a Ssadh Length = | 7e-54 | ||
| 3b4w_A | 495 | Crystal Structure Of Mycobacterium Tuberculosis Ald | 9e-52 | ||
| 3qan_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 2e-49 | ||
| 3r64_A | 508 | Crystal Structure Of A Nad-Dependent Benzaldehyde D | 2e-47 | ||
| 3rjl_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 4e-47 | ||
| 3rh9_A | 506 | The Crystal Structure Of Oxidoreductase From Marino | 2e-46 | ||
| 1t90_A | 486 | Crystal Structure Of Methylmalonate Semialdehyde De | 4e-44 | ||
| 3pqa_A | 486 | Crystal Structure Of Glyceraldehyde-3-Phosphate Deh | 1e-42 | ||
| 4dng_A | 485 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 2e-42 | ||
| 3prl_A | 505 | Crystal Structure Of Nadp-Dependent Glyceraldehyde- | 8e-42 | ||
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate Dehydrogenase Length = 51 | 2e-40 | ||
| 2bhp_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 2e-40 | ||
| 2bja_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 5e-39 | ||
| 2jg7_A | 510 | Crystal Structure Of Seabream Antiquitin And Elucid | 4e-38 | ||
| 1euh_A | 475 | Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase | 1e-37 | ||
| 2id2_A | 475 | Gapn T244s Mutant X-Ray Structure At 2.5 A Length = | 3e-37 | ||
| 2esd_A | 475 | Crystal Structure Of Thioacylenzyme Intermediate Of | 7e-37 | ||
| 1qi1_A | 475 | Ternary Complex Of An Nadp Dependent Aldehyde Dehyd | 2e-36 | ||
| 3ros_A | 484 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 1e-34 | ||
| 2j6l_A | 500 | Structure Of Aminoadipate-Semialdehyde Dehydrogenas | 4e-34 | ||
| 3ju8_A | 490 | Crystal Structure Of Succinylglutamic Semialdehyde | 8e-33 | ||
| 1ky8_A | 501 | Crystal Structure Of The Non-Phosphorylating Glycer | 1e-32 | ||
| 1uxv_A | 501 | Structural Basis For Allosteric Regulation And Subs | 1e-32 | ||
| 1uxn_A | 501 | Structural Basis For Allosteric Regulation And Subs | 1e-32 | ||
| 3haz_A | 1001 | Crystal Structure Of Bifunctional Proline Utilizati | 2e-31 | ||
| 4f9i_A | 1026 | Crystal Structure Of Proline Utilization A (Puta) F | 3e-31 | ||
| 3efv_A | 462 | Crystal Structure Of A Putative Succinate-Semialdeh | 6e-31 | ||
| 4e4g_A | 521 | Crystal Structure Of Putative Methylmalonate-Semial | 1e-28 | ||
| 4h7n_A | 474 | The Structure Of Putative Aldehyde Dehydrogenase Pu | 1e-24 | ||
| 3lv1_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 2e-23 | ||
| 3sza_A | 469 | Crystal Structure Of Human Aldh3a1 - Apo Form Lengt | 3e-23 | ||
| 3v9j_A | 563 | Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat | 1e-22 | ||
| 1ad3_A | 452 | Class 3 Aldehyde Dehydrogenase Complex With Nicotin | 2e-22 | ||
| 3lns_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 3e-22 | ||
| 3v9g_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 8e-21 | ||
| 3v9h_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 2e-20 | ||
| 3v9i_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 4e-20 | ||
| 2y53_A | 534 | Crystal Structure Of E257q Mutant Of The Box Pathwa | 9e-18 | ||
| 2y51_A | 534 | Crystal Structure Of E167a Mutant Of The Box Pathwa | 9e-18 | ||
| 2y52_A | 534 | Crystal Structure Of E496a Mutant Of The Box Pathwa | 1e-17 | ||
| 2vro_A | 532 | Crystal Structure Of Aldehyde Dehydrogenase From Bu | 1e-17 | ||
| 2y5d_A | 534 | Crystal Structure Of C296a Mutant Of The Box Pathwa | 1e-16 | ||
| 3v4c_A | 528 | Crystal Structure Of A Semialdehyde Dehydrogenase F | 4e-11 | ||
| 1eyy_A | 510 | Crystal Structure Of The Nadp+ Dependent Aldehyde D | 7e-08 | ||
| 3my7_A | 452 | The Crystal Structure Of The Acdh Domain Of An Alco | 4e-05 |
| >pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499 | Back alignment and structure |
|
| >pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494 | Back alignment and structure |
|
| >pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500 | Back alignment and structure |
|
| >pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500 | Back alignment and structure |
|
| >pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500 | Back alignment and structure |
|
| >pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499 | Back alignment and structure |
|
| >pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501 | Back alignment and structure |
|
| >pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501 | Back alignment and structure |
|
| >pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517 | Back alignment and structure |
|
| >pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489 | Back alignment and structure |
|
| >pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489 | Back alignment and structure |
|
| >pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496 | Back alignment and structure |
|
| >pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490 | Back alignment and structure |
|
| >pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515 | Back alignment and structure |
|
| >pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503 | Back alignment and structure |
|
| >pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503 | Back alignment and structure |
|
| >pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520 | Back alignment and structure |
|
| >pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520 | Back alignment and structure |
|
| >pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517 | Back alignment and structure |
|
| >pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528 | Back alignment and structure |
|
| >pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514 | Back alignment and structure |
|
| >pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503 | Back alignment and structure |
|
| >pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517 | Back alignment and structure |
|
| >pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484 | Back alignment and structure |
|
| >pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504 | Back alignment and structure |
|
| >pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495 | Back alignment and structure |
|
| >pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479 | Back alignment and structure |
|
| >pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479 | Back alignment and structure |
|
| >pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479 | Back alignment and structure |
|
| >pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498 | Back alignment and structure |
|
| >pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497 | Back alignment and structure |
|
| >pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478 | Back alignment and structure |
|
| >pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497 | Back alignment and structure |
|
| >pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495 | Back alignment and structure |
|
| >pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538 | Back alignment and structure |
|
| >pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508 | Back alignment and structure |
|
| >pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538 | Back alignment and structure |
|
| >pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506 | Back alignment and structure |
|
| >pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486 | Back alignment and structure |
|
| >pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486 | Back alignment and structure |
|
| >pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485 | Back alignment and structure |
|
| >pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505 | Back alignment and structure |
|
| >pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516 | Back alignment and structure |
|
| >pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516 | Back alignment and structure |
|
| >pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516 | Back alignment and structure |
|
| >pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510 | Back alignment and structure |
|
| >pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475 | Back alignment and structure |
|
| >pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475 | Back alignment and structure |
|
| >pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484 | Back alignment and structure |
|
| >pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490 | Back alignment and structure |
|
| >pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501 | Back alignment and structure |
|
| >pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001 | Back alignment and structure |
|
| >pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026 | Back alignment and structure |
|
| >pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462 | Back alignment and structure |
|
| >pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521 | Back alignment and structure |
|
| >pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474 | Back alignment and structure |
|
| >pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457 | Back alignment and structure |
|
| >pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469 | Back alignment and structure |
|
| >pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563 | Back alignment and structure |
|
| >pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452 | Back alignment and structure |
|
| >pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457 | Back alignment and structure |
|
| >pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566 | Back alignment and structure |
|
| >pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566 | Back alignment and structure |
|
| >pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566 | Back alignment and structure |
|
| >pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Burkholderia Xenovorans Lb400 Length = 532 | Back alignment and structure |
|
| >pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 528 | Back alignment and structure |
|
| >pdb|1EYY|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde Dehydrogenase From Vibrio Harveyi. Length = 510 | Back alignment and structure |
|
| >pdb|3MY7|A Chain A, The Crystal Structure Of The Acdh Domain Of An Alcohol Dehyd From Vibrio Parahaemolyticus To 2.25a Length = 452 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500 | Back alignment and structure |
|---|
Score = 701 bits (1812), Expect = 0.0
Identities = 227/390 (58%), Positives = 281/390 (72%), Gaps = 4/390 (1%)
Query: 50 AAAAEDPITPPVK---VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVN 106
+AAA + P + V Q+ IN ++ D+ S KTFPT++P TG+VI VAEG+ EDV+
Sbjct: 1 SAAATQAVPAPNQQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVD 60
Query: 107 RAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165
+AV AAR AF G PW RM A R +++ R ADL+ER +AALET DNGKP+ S
Sbjct: 61 KAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLV 120
Query: 166 EVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225
++ M + RYYAGWADK G T P DG + T HEP+GV GQIIPWNFPLLM AWK+G
Sbjct: 121 DLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLG 180
Query: 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDK 285
PALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK
Sbjct: 181 PALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDK 240
Query: 286 LAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQ 345
+AFTGST G+++ A SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQ
Sbjct: 241 VAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQ 300
Query: 346 CCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 405
C CAGSRTFV E +YD+FVE++ A A RVVG+PF +QGPQ+D QF+KIL YI +G
Sbjct: 301 CSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTG 360
Query: 406 VDGGAKLETGGERLGAKGYYIKPTVFTGVK 435
GAKL GG +GY+I+PTVF V+
Sbjct: 361 KQEGAKLLCGGGIAADRGYFIQPTVFGDVQ 390
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501 | Back alignment and structure |
|---|
Score = 701 bits (1812), Expect = 0.0
Identities = 212/390 (54%), Positives = 272/390 (69%), Gaps = 1/390 (0%)
Query: 47 SSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVN 106
SS+A ++ YT++ IN ++ S SGK FP +P T + + V EG+ EDV+
Sbjct: 2 SSSAMPDVPAPLTNLQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVD 61
Query: 107 RAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165
+AV AAR+AF G PW M A ER +++ + ADL+ER +A +E + GK F +
Sbjct: 62 KAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLM 121
Query: 166 EVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225
++ + RY AGWADKIQG T P DG + T EP+GV GQIIPWNFPLLMF WK+G
Sbjct: 122 DLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIG 181
Query: 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDK 285
PAL+CGNT+V+K AEQTPL+AL++ L+ EAG PPGV+NIV GYGPTAGAA++SHM+VDK
Sbjct: 182 PALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDK 241
Query: 286 LAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQ 345
+AFTGST GK++ + A KSNLK V+LELGGKSP IV DAD+D A E AH +F++QGQ
Sbjct: 242 VAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQ 301
Query: 346 CCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 405
CC A SR FV ES+YD+FV ++ A K V+G+P G+ QGPQID EQ+EKIL I SG
Sbjct: 302 CCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESG 361
Query: 406 VDGGAKLETGGERLGAKGYYIKPTVFTGVK 435
GAKLE GG G KGY+I+PTVF+ V
Sbjct: 362 KKEGAKLECGGGPWGNKGYFIQPTVFSDVT 391
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517 | Back alignment and structure |
|---|
Score = 694 bits (1793), Expect = 0.0
Identities = 159/399 (39%), Positives = 242/399 (60%), Gaps = 7/399 (1%)
Query: 44 STASSAAAAAEDPITPPVKVDY---TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEG 100
+ K+ QL I G+FVD+ KT+ T++P G VI V+
Sbjct: 12 GEDDESECVINYVEKAVNKLTLQMPYQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLA 71
Query: 101 EAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE 160
+ DV++AV+AA++AF+ G W ++ A +R +++ R AD++E+H +E+A +E D G +
Sbjct: 72 QVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYT 131
Query: 161 QSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGP----YHVQTLHEPIGVAGQIIPWNFP 216
+ +T V M+ + FRY+AGW DKIQG T P + T EP+GV G +IPWN+P
Sbjct: 132 LALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYP 191
Query: 217 LLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAA 276
L+M +WK LA GNT+V+K A+ TPL+AL ++L +AG+P GV+NI+ G G G
Sbjct: 192 LMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQR 251
Query: 277 LASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAH 336
L+ H +V K+ FTGST GK +++ A SN+K V+LELGGKSP I+ D D++KA ++
Sbjct: 252 LSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGM 311
Query: 337 YALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFE 396
++FFN+G+ C A R FV ES+++QFV+K K +G+P + GPQ
Sbjct: 312 SSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLR 371
Query: 397 KILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVK 435
K+++Y + GV GA L GG ++ G++ +PTVFT V+
Sbjct: 372 KLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVE 410
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520 | Back alignment and structure |
|---|
Score = 674 bits (1741), Expect = 0.0
Identities = 141/396 (35%), Positives = 216/396 (54%), Gaps = 7/396 (1%)
Query: 45 TASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAED 104
+ + +K + I+G++V+SA+ T ++P +VI V+EG ED
Sbjct: 12 DLGTENLYFQSNAMELLKHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKED 71
Query: 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164
RA+ AAR+AF+ G W + TA R K + AD ++ H + +A LET D GK E+ +
Sbjct: 72 AERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEE-SY 130
Query: 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223
++ +F Y+AG ADK G + P + + EP+GV QI PWN+PLL +WK
Sbjct: 131 ADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWK 190
Query: 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 283
+ PALA G ++V+K +E TPL+ + V +L+ E G P G +N++ G G G ++ H EV
Sbjct: 191 IAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEV 250
Query: 284 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 343
D ++FTG TGK +++ AA +N+ + LELGGK+P I+ +DAD + A + A +F+
Sbjct: 251 DLVSFTGGIETGKHIMKNAA-NNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHA 309
Query: 344 GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 403
GQ C AGSR V S+ D+F + K +G+ F + GP I +E KI Y+
Sbjct: 310 GQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMD 369
Query: 404 SGVDGGAKLETGGERLG----AKGYYIKPTVFTGVK 435
GA + GG+R G + +PTV T
Sbjct: 370 VAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCD 405
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 670 bits (1730), Expect = 0.0
Identities = 160/394 (40%), Positives = 231/394 (58%), Gaps = 6/394 (1%)
Query: 46 ASSAAAAAEDPITPPVKVD-YTQLLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAE 103
+ A D P +++ Q+L++G+ VD+ASG T + P G+V+ E A+
Sbjct: 2 VMLSNFIAPDSNDPRLRIKSRYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASAD 61
Query: 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163
DV +AV+AARKAFD GPWPRM+ ERS+++ + ADL+ +E+A +E+ + GKP Q A
Sbjct: 62 DVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILARQEELALIESLEVGKPIAQ-A 120
Query: 164 QTEVPMTTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAW 222
+ E+ L+ Y AG A ++G T G L EP+GV G I PWNFP ++ +
Sbjct: 121 RGEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASE 180
Query: 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 282
+V A+ G T+VLK +E T +++ +++L EAG+P GV N+V+GYG AG LA
Sbjct: 181 RVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPN 240
Query: 283 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 342
VD +AFTGS G + ++AA+ +K V LELGGK P IV DAD+D AA+ Y ++ N
Sbjct: 241 VDMVAFTGSVRVGTKLGEIAAR-TVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHN 299
Query: 343 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 402
GQCC +GSR V E + D +E+ ++ K GDP + G I EK+ Y+
Sbjct: 300 AGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYV 359
Query: 403 RSGVDGGAKLETGGERLGA-KGYYIKPTVFTGVK 435
+G+ GA+L GGER+G G Y PTVF GV
Sbjct: 360 TAGITSGAELLLGGERIGREAGLYYAPTVFAGVT 393
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503 | Back alignment and structure |
|---|
Score = 665 bits (1717), Expect = 0.0
Identities = 150/384 (39%), Positives = 216/384 (56%), Gaps = 11/384 (2%)
Query: 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDE-- 118
+ + QL ING + K P ++P T ++I + EDV+ AV+AA+ A
Sbjct: 3 IPIPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNK 62
Query: 119 -GPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYY 177
W + R++ + A + E+A LE+ D GKP ++ A ++ F YY
Sbjct: 63 GADWATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDE-AAWDIDDVAGCFEYY 121
Query: 178 AGWADKIQGLTAPA----DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 233
A A+K+ + L EPIGV G I PWN+P+LM WKV PALA G
Sbjct: 122 ADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCA 181
Query: 234 IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 293
+LK +E L+ L + ++ E GLPPGVLNI++G GP AGA LA+H +VDK+AFTGS+
Sbjct: 182 AILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSA 241
Query: 294 TGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRT 353
TG ++ AA+ +KPV+LELGGKSP +V ED D+DKAAE A + F+ GQ C A SR
Sbjct: 242 TGSKIMTAAAQ-LVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRL 300
Query: 354 FVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLE 413
+HES+ +F+ + + DP + G + GP + Q+EKILK++ + GA +
Sbjct: 301 ILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATIL 360
Query: 414 TGGERLG--AKGYYIKPTVFTGVK 435
TGG R KG++I+PT+ T V
Sbjct: 361 TGGSRPEHLKKGFFIEPTIITDVT 384
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515 | Back alignment and structure |
|---|
Score = 662 bits (1711), Expect = 0.0
Identities = 155/400 (38%), Positives = 225/400 (56%), Gaps = 13/400 (3%)
Query: 44 STASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAE 103
+ + + + +K I G+FV S SG+TFP+LDP T +V+ A G
Sbjct: 5 DRVAGISWETIEEVRRRLKERPALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGER 64
Query: 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163
+V+RA AA +AF W R A ER + +LR A+L+E+H DE+A +E D G+
Sbjct: 65 EVDRAAKAAHEAFQ--RWSRTKAKERKRYLLRIAELIEKHADELAVMECLDAGQVLRI-V 121
Query: 164 QTEVPMTTRLFRYYAGWADK-IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222
+ +V F +YA +A+ ++ T P D + T+ P G G I PWN PL++ W
Sbjct: 122 RAQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTW 181
Query: 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 282
++ PALA GNT+VLK AE +P +A ++++L EA LPPGV N+V G+G AGAAL +H
Sbjct: 182 RIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPL 241
Query: 283 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 342
V L TG T TGKIV++ AA +LK ++ ELGGKSP +V DAD+++A + + +F
Sbjct: 242 VPLLTLTGETETGKIVMRNAA-DHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSF 300
Query: 343 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 402
G+ C A SR V E +++ FV K A VG P + GP I E +++L Y+
Sbjct: 301 NGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYV 360
Query: 403 RSGVDGGAKLETGGERLG--------AKGYYIKPTVFTGV 434
+G GA+L GGER ++G Y+ PTVF G
Sbjct: 361 EAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVGE 400
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503 | Back alignment and structure |
|---|
Score = 653 bits (1688), Expect = 0.0
Identities = 137/396 (34%), Positives = 208/396 (52%), Gaps = 12/396 (3%)
Query: 47 SSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTF-PTLDPRTGDVITHVAEGEAEDV 105
+ + T V V G+ + S G T P +P TG V+ + AE+V
Sbjct: 1 AQLVDSMPSASTGSVVVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEV 60
Query: 106 NRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165
++AV +A+ A+ W +M ERS+++L A ++ D IA LE +NGK A+
Sbjct: 61 DQAVQSAQAAYL--KWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTI-TEAEY 117
Query: 166 EVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225
++ + YYAG A + G G T EP+GV I+ WN+P ++ AWK
Sbjct: 118 DIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCA 177
Query: 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDK 285
PALACGN +V K + TP++ + ++++ HEAG+P G++N+V G G G+ L H V K
Sbjct: 178 PALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAK 236
Query: 286 LAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQ 345
++FTGS TGK V++++AK +K VTLELGGKSP ++ +D +++ A A A F QGQ
Sbjct: 237 VSFTGSVPTGKKVMEMSAK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQ 295
Query: 346 CCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 405
C G+R FV + QF+E+ VVGDP + G I Q +K+L ++
Sbjct: 296 VCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQA 355
Query: 406 VDGGAKLETGGERLG------AKGYYIKPTVFTGVK 435
GA++ GGE L GY++ P V +
Sbjct: 356 KKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCR 391
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517 | Back alignment and structure |
|---|
Score = 650 bits (1678), Expect = 0.0
Identities = 137/382 (35%), Positives = 201/382 (52%), Gaps = 9/382 (2%)
Query: 58 TPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFD 117
TP I+G +V+ +G F ++ P TG++I + V RA+++A++A
Sbjct: 7 TPLKAQPKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQ- 65
Query: 118 EGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYY 177
W M+ R +I+ R AD++ ND ++ LET D GKP +++ + F ++
Sbjct: 66 -KEWAAMSPMARGRILKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSGADAFEFF 124
Query: 178 AGWA-DKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVL 236
G A + G P G T P+GV I WN+P + WK PAL GN +V
Sbjct: 125 GGIAPSALNGDYIPLGGD-FAYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVF 183
Query: 237 KTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGK 296
K +E TPL AL ++++L EAGLP G+ N++ G T G L +H +V K++ TGS TG+
Sbjct: 184 KPSENTPLGALKIAEILIEAGLPKGLFNVIQGDRDT-GPLLVNHPDVAKVSLTGSVPTGR 242
Query: 297 IVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVH 356
V AA +LK VT+ELGGKSP IV +DAD++ A A F++ GQ C G+R FV
Sbjct: 243 KVAAAAA-GHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQ 301
Query: 357 ESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG 416
+ +F+E ++GDP GP + Q EK+L YI G GA L TGG
Sbjct: 302 KKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGG 361
Query: 417 ---ERLGAKGYYIKPTVFTGVK 435
+ +G Y++PTVF V
Sbjct: 362 GIPNNVAGEGAYVQPTVFADVT 383
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495 | Back alignment and structure |
|---|
Score = 643 bits (1662), Expect = 0.0
Identities = 138/392 (35%), Positives = 203/392 (51%), Gaps = 7/392 (1%)
Query: 46 ASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDV 105
+ + +LLING+ V G+ P +P TGDV+ +AE AE V
Sbjct: 4 HHHHHHLESTSLYKKAGLMQHKLLINGELVS-GEGEKQPVYNPATGDVLLEIAEASAEQV 62
Query: 106 NRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165
+ AV AA AF W + T R++ +L+ AD++E + A LE+ + GKP +
Sbjct: 63 DAAVRAADAAF--AEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFND 120
Query: 166 EVPMTTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224
E+P +FR++AG A + GL A + +P+GV I PWN+PL+M AWK+
Sbjct: 121 EIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKL 180
Query: 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVD 284
PALA GN +VLK +E TPL+AL +++L + P GV+NI+ G G T G L H +V
Sbjct: 181 APALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVR 239
Query: 285 KLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 344
++ TGS TG+ ++ A S++K +ELGGK+P IV +DAD++ E ++N G
Sbjct: 240 MVSLTGSIATGEHIISHTA-SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAG 298
Query: 345 QCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 404
Q C A R + + +YD VEK A G P + GP E++ K +
Sbjct: 299 QDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEE 358
Query: 405 GV-DGGAKLETGGERLGAKGYYIKPTVFTGVK 435
G K+ TGGE+ GYY PT+ G
Sbjct: 359 AKATGHIKVITGGEKRKGNGYYYAPTLLAGAL 390
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498 | Back alignment and structure |
|---|
Score = 638 bits (1648), Expect = 0.0
Identities = 132/390 (33%), Positives = 198/390 (50%), Gaps = 7/390 (1%)
Query: 48 SAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNR 107
S+ + TQLLI +F + L+PRTG I +AE ++
Sbjct: 8 SSGVDLGTENLYFQSMMDTQLLIGSRFEA-GTEAEEHILNPRTGAGIIDLAEASHAQIDA 66
Query: 108 AVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEV 167
AV AA +AF W + T ERS +L+ AD +E+ DE AALE + GKP E+
Sbjct: 67 AVDAAERAFV--GWSQTTPAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDEL 124
Query: 168 PMTTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 226
P +R++AG + A P + +PIG+ G I PWN+PL+M AWK+ P
Sbjct: 125 PAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAP 184
Query: 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKL 286
A+ GNT+V K +EQTPL+AL +++L+ + LP GV+N+++G G T G AL +H +V +
Sbjct: 185 AIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMV 243
Query: 287 AFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQC 346
+ TG TGK VL AAK +K LELGGK+P IV DAD++ ++N GQ
Sbjct: 244 SITGDIATGKKVLAAAAK-TVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQD 302
Query: 347 CCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV 406
C A R + +Y++ V + + GP I Q +++ ++
Sbjct: 303 CTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAA 362
Query: 407 D-GGAKLETGGERLGAKGYYIKPTVFTGVK 435
D ++ TGG +G++ +PTV G
Sbjct: 363 DQKHIEITTGGRTGSDEGFFFQPTVVAGAT 392
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495 | Back alignment and structure |
|---|
Score = 592 bits (1530), Expect = 0.0
Identities = 134/375 (35%), Positives = 188/375 (50%), Gaps = 4/375 (1%)
Query: 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP 122
+Y +L I G++ ++ P TG+ + V A DV+ AV+AAR AFD GPWP
Sbjct: 6 TEYDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWP 65
Query: 123 RMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWAD 182
+ER+ +I +L D L + G+P + Y+AG AD
Sbjct: 66 STPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAAD 125
Query: 183 KIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242
K+ EP+GV G I+ WN PL + K+ PAL G TIVLK A +T
Sbjct: 126 KVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAET 185
Query: 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
PL+A ++++ E GLP GVL++V G G G AL S+ ++D FTGS+ G+ V + A
Sbjct: 186 PLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRA 244
Query: 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 362
A+ LKP TLELGGKS I+ ED D+ A + ++ N GQ C +R S YD+
Sbjct: 245 AE-MLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDE 303
Query: 363 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-- 420
V VG P Q GP I +Q ++ YI G++ GA+L GG R
Sbjct: 304 IVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGL 363
Query: 421 AKGYYIKPTVFTGVK 435
G++I+PTVF V
Sbjct: 364 DNGFFIQPTVFADVD 378
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497 | Back alignment and structure |
|---|
Score = 575 bits (1484), Expect = 0.0
Identities = 128/392 (32%), Positives = 207/392 (52%), Gaps = 7/392 (1%)
Query: 47 SSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVN 106
P ++ + ING + D ++ +DP T + ++ G D +
Sbjct: 7 HHMGTLEAQTQGPGSMLNKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDAD 66
Query: 107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTE 166
+A++AA+KAF W + +ER + + ++ E+ + ++A + + G P + + +
Sbjct: 67 KAINAAKKAFQ--TWKTTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQ 124
Query: 167 VPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 226
+ R + + A +G ++ IGV G I PWN+P+ KV P
Sbjct: 125 TATGSSHIRNFIKAYKEFSFQEALIEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIP 184
Query: 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKL 286
AL G T+VLK +E PLSA+ +++L EA LP GV N+++G G G+ L++H +++ +
Sbjct: 185 ALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMI 244
Query: 287 AFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQC 346
+FTGST GK + + A+ LK V LELGGK I+ DAD+D A + F+N GQ
Sbjct: 245 SFTGSTRAGKDISKNASN-TLKRVCLELGGKGANIIFADADID-ALQRGVRHCFYNSGQS 302
Query: 347 CCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV 406
C A +R V +++YD+ ++ A +A K VG + G GP + EQ++KI I+SG+
Sbjct: 303 CNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGI 362
Query: 407 DGGAKLETGGERLGA---KGYYIKPTVFTGVK 435
D GA L TGG L +GYY++PTVF VK
Sbjct: 363 DEGATLVTGGTGLPMGMERGYYVRPTVFADVK 394
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538 | Back alignment and structure |
|---|
Score = 574 bits (1483), Expect = 0.0
Identities = 128/394 (32%), Positives = 197/394 (50%), Gaps = 14/394 (3%)
Query: 49 AAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNR 107
A A + + +Y L+ING+ V + + +P R ++ V++ + +
Sbjct: 22 AFEEALGLVEKELGKEY-PLIINGERVTT--EDKIQSWNPARKDQLVGSVSKANQDLAEK 78
Query: 108 AVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEV 167
A+ +A +AF W + ER+ I+++ A ++ R E +A + GKP+++ A +
Sbjct: 79 AIQSADEAFQ--TWRNVNPEERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKE-ADADT 135
Query: 168 PMTTRLFRYYAGWADKI-QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 226
YYA ++ +G + + + P+GV I PWNF L +
Sbjct: 136 AEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVA 195
Query: 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKL 286
+ GNT+VLK A TP+ A ++L +AGLP GV+N V G G G L H + +
Sbjct: 196 PIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLI 255
Query: 287 AFTGSTTTGKIVLQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 341
FTGS G + + AA ++LK V +E+GGK +V DAD+D AAE + F
Sbjct: 256 TFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFG 315
Query: 342 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 401
GQ C AGSR +H+ VYD+ +EK ALA VGDP GP ID + FEKI+ Y
Sbjct: 316 FSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSY 375
Query: 402 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVK 435
I G G +L TGGE + G++I+PT+ +
Sbjct: 376 IEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLD 408
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478 | Back alignment and structure |
|---|
Score = 569 bits (1468), Expect = 0.0
Identities = 131/375 (34%), Positives = 202/375 (53%), Gaps = 10/375 (2%)
Query: 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPR 123
DYT+ ING++V+S S +T ++P T +VI VA+G DV++AV AA + E +
Sbjct: 6 DYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLE--FRH 63
Query: 124 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 183
+ ER ++ + E D+I T + G P S + M F D
Sbjct: 64 TSVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDN 123
Query: 184 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243
+ D + E IGV+G I PWNFP + K+ A A G+ +VLK +E+TP
Sbjct: 124 YEFEERRGDD----LVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETP 179
Query: 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303
+A+ ++++ + G+P GV N+V+G G G L+ H +V ++FTGS TG +++ AA
Sbjct: 180 FAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAA 239
Query: 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 363
K + K V+LELGGKSP+IV +D D+ +AA+ + N GQ C AG+R V + D F
Sbjct: 240 K-DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAF 298
Query: 364 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA-- 421
+ + + VG+P + G Q GP I +QF+++ YI G++ GA+L GG
Sbjct: 299 LAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGL 358
Query: 422 -KGYYIKPTVFTGVK 435
KGY+ +PT+F V
Sbjct: 359 EKGYFARPTIFINVD 373
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516 | Back alignment and structure |
|---|
Score = 551 bits (1423), Expect = 0.0
Identities = 121/379 (31%), Positives = 187/379 (49%), Gaps = 15/379 (3%)
Query: 65 YTQLLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPR 123
+ L I G++VD+ + +L+P +V+ A+ + A+ AA KAF W
Sbjct: 37 HYPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWKD 92
Query: 124 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 183
+RS+++L+ A L+ R E+ A ++ GK + + A +V YYA A +
Sbjct: 93 WPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVE-ASADVAEAIDFIEYYARAALR 151
Query: 184 IQGLTAPADGP--YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
+ ++ + P+G I PWNFP+ +F + +A GNT++ K AE
Sbjct: 152 YRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAED 211
Query: 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
+ V ++ HEAG PPGV+N + G G GA L H + + FTGS G + +
Sbjct: 212 AVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEA 271
Query: 302 AAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVH 356
A + + K +E GGK+ IV E AD D AAE + + QGQ C A SR +
Sbjct: 272 AGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILT 331
Query: 357 ESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG 416
+ Y+ +E+ A + VG P + GP + +EQ K+L YI G + G +L GG
Sbjct: 332 QGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGG 389
Query: 417 ERLGAKGYYIKPTVFTGVK 435
+RL +GY+I PTVFT V
Sbjct: 390 KRLEGEGYFIAPTVFTEVP 408
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508 | Back alignment and structure |
|---|
Score = 525 bits (1355), Expect = 0.0
Identities = 128/376 (34%), Positives = 191/376 (50%), Gaps = 9/376 (2%)
Query: 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP 122
+D T+ LI GQ+V+ S + ++P VI + DV+ A AA+KA W
Sbjct: 10 IDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQ--AEWA 67
Query: 123 RMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWAD 182
A ERS II R A+LLE H +EI ++G + A E+ + + + A +
Sbjct: 68 ATPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSK-ANLEITLAGNITKESASFPG 126
Query: 183 KIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
++ G +P++ P + GV G I PWNFPL + V PALA GN +V+K A
Sbjct: 127 RVHGRISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASD 186
Query: 242 TPLSALYVS-KLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
TP++ + ++ EAG+P GV++ V+G G G +H ++FTGST G+ V +
Sbjct: 187 TPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGE 246
Query: 301 LAAKS-NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
LA +K V LELGG +PF+V DAD+D AA+ A F +QGQ C + +R V +V
Sbjct: 247 LAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAV 306
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 419
+D+F+EK GDP G GP I+ Q + + I GA ++ G
Sbjct: 307 HDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI- 365
Query: 420 GAKGYYIKPTVFTGVK 435
+G + P VF+ V
Sbjct: 366 --EGRLVHPHVFSDVT 379
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501 | Back alignment and structure |
|---|
Score = 480 bits (1237), Expect = e-167
Identities = 107/386 (27%), Positives = 158/386 (40%), Gaps = 15/386 (3%)
Query: 54 EDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAAR 113
E I V + G++ S G+ P I V E+V R +
Sbjct: 7 EGVIKEKGGVPVYPSYLAGEWGGS--GQEIEVKSPIDLATIAKVISPSREEVERTLDVLF 64
Query: 114 KAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRL 173
K M ER ++ + AD++ER+ D A + + GKP A EV
Sbjct: 65 KRGRW-SARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSA-AVGEVKAAVDR 122
Query: 174 FRYYAGWADKIQGLTAPADGPYHVQ-----TLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 228
R KI G P D Y EP+GV I P+N+PL K+ +
Sbjct: 123 LRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSF 182
Query: 229 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 288
GN +V+K + PL A K L +AG PP + +++ G + + V ++F
Sbjct: 183 IYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKE-AEKIVADDRVAAVSF 241
Query: 289 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 348
TGST G+ + +K +ELGG P IV EDAD+D AA+ ++ GQ C
Sbjct: 242 TGSTEVGER---VVKVGGVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCD 298
Query: 349 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 408
A VY + VE+ VGDP + GP I ++++ I V+
Sbjct: 299 AIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEK 358
Query: 409 GAKLETGGERLGAKGYYIKPTVFTGV 434
G ++ GG RLG Y++PT
Sbjct: 359 GGRVLAGGRRLG--PTYVQPTFVEAP 382
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505 | Back alignment and structure |
|---|
Score = 478 bits (1234), Expect = e-167
Identities = 124/376 (32%), Positives = 181/376 (48%), Gaps = 16/376 (4%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+L NG++V+S +G+ P +G + + E+VN A+ A+ A W
Sbjct: 12 ANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKI--WKIRP 69
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
+ER ++ +ADLLE + I L + KP + A EV T + R+ A A ++
Sbjct: 70 IHERVDLLYAWADLLEERKEIIGELIMHEVAKPKKS-AIGEVSRTADIIRHTADEALRLN 128
Query: 186 GLTAPADGPYHVQ------TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239
G T D EP+GV I P+N+P+ + A K+ PAL GNT+V K A
Sbjct: 129 GETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPA 188
Query: 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299
Q LS + + + L +AG P G++ +V+G G G L H +D + FTG TTTG+
Sbjct: 189 TQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGER-- 246
Query: 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
++ K+ + PV LELGGK P IV +DAD+ A F GQ C A R FV +SV
Sbjct: 247 -ISEKAKMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSV 305
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 419
DQ V L + VG P P ID + I I ++ GA L +G +R
Sbjct: 306 ADQLVANIKELVEQLTVGSPED-DADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR- 363
Query: 420 GAKGYYIKPTVFTGVK 435
+G + PT+ V
Sbjct: 364 --QGNLLSPTLLDDVT 377
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490 | Back alignment and structure |
|---|
Score = 473 bits (1219), Expect = e-165
Identities = 109/369 (29%), Positives = 163/369 (44%), Gaps = 7/369 (1%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+ I GQ++ G+T +LDP V+ +A V+ AV AAR+AF W R
Sbjct: 6 STHYIAGQWLA-GQGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPA--WARRP 62
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
+R +++ RFA L+ DE+A + + GKP + + TEV +
Sbjct: 63 LEQRIELLERFAATLKSRADELARVIGEETGKPLWE-SATEVTSMVNKVAISVQAFRERT 121
Query: 186 GLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
G + H+P GV P+NFP + + PAL GN +V K +E TP
Sbjct: 122 GEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKV 181
Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
A K +AGLP GVLN+V G G G ALA+H +D L FTGS+ TG ++
Sbjct: 182 AELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQ 240
Query: 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY-DQFV 364
K + LE+GG +P +V E AD+D A + F + GQ C R V + + D +
Sbjct: 241 PQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALL 300
Query: 365 EKANALAMKRVVGDPF-KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 423
+ A++ VG + G I E +LK + GA+ +
Sbjct: 301 ARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGA 360
Query: 424 YYIKPTVFT 432
+ P +
Sbjct: 361 ALLTPGILD 369
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486 | Back alignment and structure |
|---|
Score = 472 bits (1217), Expect = e-165
Identities = 107/369 (28%), Positives = 183/369 (49%), Gaps = 17/369 (4%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
+ I+G++++ + ++P + +VI + E+ A+ A K + +
Sbjct: 2 MFIDGKWIN---REDMDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEV--MKNLPIT 56
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
+R I++ A ++ +E+A + D GKP +Q A+ EV + F+ A + + +
Sbjct: 57 KRYNILMNIAKQIKEKKEELAKILAIDAGKPIKQ-ARVEVERSIGTFKLAAFYVKEHRDE 115
Query: 188 TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247
P+D + T EP+G+ G I P+NFPL + A K+ PA+A GN IV + + PL +
Sbjct: 116 VIPSDD-RLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCI 174
Query: 248 YVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303
++K++ A +P GV N+++G G G + + +V+ ++FTGS+ G+++ + A
Sbjct: 175 ELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG 234
Query: 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 363
K + LELGG +P IV +DAD++KA F GQ C + V ES+ D+F
Sbjct: 235 ---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKF 291
Query: 364 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 423
+E A VG+P GP I E E + K + +D G KL GG+R
Sbjct: 292 IEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DK 348
Query: 424 YYIKPTVFT 432
PT+
Sbjct: 349 ALFYPTILE 357
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534 | Back alignment and structure |
|---|
Score = 467 bits (1203), Expect = e-162
Identities = 84/395 (21%), Positives = 140/395 (35%), Gaps = 29/395 (7%)
Query: 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPR 123
+ + + GQ++ +G DP TG + V+ + A
Sbjct: 6 ELLKNHVAGQWIA-GTGAGITLTDPVTGVALVRVSSEGLDLARAFSFAREDGG--AALRA 62
Query: 124 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 183
+T +R+ + LL+ + A+ T ++G SA ++ YYA
Sbjct: 63 LTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSA-VDIDGGIFTLSYYAKLGAS 121
Query: 184 IQGLTAPADGP----------YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 233
+ + A DG L GVA I +NFP K PAL G
Sbjct: 122 LGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVP 181
Query: 234 IVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGST 292
+++K A T + + +AG LPPG L+I+ G ++ L D ++FTGS
Sbjct: 182 VIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTGSA 238
Query: 293 TTGKIVLQLAAKS-NLKPVTLELGGKSPFIVCEDADV-----DKAAELAHYALFFNQGQC 346
T + A + ++ + I+C DA D + + GQ
Sbjct: 239 DTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQK 298
Query: 347 CCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV 406
C A R FV E+ + +E A K VG+P ++ G + EQ+E +L I +
Sbjct: 299 CTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALR 358
Query: 407 DGGAKLETGGERL-----GAKGYYIKPTVFTGVKV 436
+ + P +F
Sbjct: 359 EEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDP 393
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479 | Back alignment and structure |
|---|
Score = 433 bits (1116), Expect = e-149
Identities = 129/371 (34%), Positives = 200/371 (53%), Gaps = 6/371 (1%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+ I+GQFV ++P T VI+ + +G+AED +A+ AA +A E W +
Sbjct: 7 HPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPE--WEALP 64
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A ER+ + + + + EI+AL + GK + A+ EV T Y A WA + +
Sbjct: 65 AIERASWLRKISAGIRERASEISALIVEEGGKIQQL-AEVEVAFTADYIDYMAEWARRYE 123
Query: 186 GLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G +D P ++ +GV I+PWNFP + A K+ PAL GNTIV+K +E TP
Sbjct: 124 GEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPN 183
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
+A+ +K++ E GLP GV N+V G G T G LA + +V ++ TGS + G+ ++ AA
Sbjct: 184 NAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAA- 242
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
N+ V LELGGK+P IV +DAD++ A + + N GQ C R +V + +YDQFV
Sbjct: 243 KNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFV 302
Query: 365 EKANALAMKRVVGDPF-KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 423
+ G+P + I GP I++ E++ + + V+ GA++ GG+ + KG
Sbjct: 303 NRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKG 362
Query: 424 YYIKPTVFTGV 434
YY PT+ V
Sbjct: 363 YYYPPTLLLDV 373
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475 | Back alignment and structure |
|---|
Score = 416 bits (1072), Expect = e-143
Identities = 111/375 (29%), Positives = 178/375 (47%), Gaps = 18/375 (4%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+ +NG++ S +P +G + V E+V+ ++A+KA W ++
Sbjct: 5 YKNYVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPA--WRALS 60
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
ER+ + + AD+L R ++I A+ + + K + +SA +EV T + Y A +++
Sbjct: 61 YIERAAYLHKVADILMRDKEKIGAILSKEVAKGY-KSAVSEVVRTAEIINYAAEEGLRME 119
Query: 186 GLTAPADGPYHVQ------TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239
G EP+G+ I P+N+P+ + K+ PAL GN I K
Sbjct: 120 GEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPP 179
Query: 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299
Q +S L +++ EAGLP GV N ++G G G + H V+ + FTGST G+ +
Sbjct: 180 TQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIG 239
Query: 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
++A ++P+ LELGGK IV EDAD++ A+ F GQ C A R V ESV
Sbjct: 240 KMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESV 296
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 419
D+ VEK + +G+P P ID++ + + I D GA T +R
Sbjct: 297 ADELVEKIREKVLALTIGNPED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR- 354
Query: 420 GAKGYYIKPTVFTGV 434
+G I P +F V
Sbjct: 355 --EGNLICPILFDKV 367
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485 | Back alignment and structure |
|---|
Score = 406 bits (1047), Expect = e-139
Identities = 114/374 (30%), Positives = 180/374 (48%), Gaps = 10/374 (2%)
Query: 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPR 123
+ ING++ SG+T L+P VIT + + + A A+KA E W +
Sbjct: 5 TLNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKE--WAK 62
Query: 124 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 183
T +R ++ + L + D+I + + G + + E+ T + + +
Sbjct: 63 STTEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIK-STIELEQTIAILDEAMTYTGE 121
Query: 184 IQGL-TAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
+ G+ P+D + P+GV I P+NFP+ + + PA+A GN++V K Q
Sbjct: 122 LGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQ 181
Query: 242 TPLSA-LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
T +S ++K AGLP GVLN++ G + ++ ++FTGST G+ + +
Sbjct: 182 TAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGE 241
Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
+A K + LELGG +PF V DADVD+A + A + F +QGQ C +R VH+ VY
Sbjct: 242 IAG-RAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVY 300
Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 420
D+FVEK A + GD GP I+ Q EK L+ I G +L G+R+
Sbjct: 301 DEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKRV- 359
Query: 421 AKGYYIKPTVFTGV 434
G + P VF G
Sbjct: 360 --GNVLTPYVFVGA 371
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500 | Back alignment and structure |
|---|
Score = 398 bits (1025), Expect = e-135
Identities = 101/375 (26%), Positives = 166/375 (44%), Gaps = 12/375 (3%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+ + NG + G+ T P + I V + D V AR+A+ W +
Sbjct: 24 NEGVYNGSWGGR--GEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKI--WADIP 79
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A +R +I+ + D L + +L + + GK EV + Y G + I
Sbjct: 80 APKRGEIVRQIGDALREKIQVLGSLVSLEMGKIL-VEGVGEVQEYVDICDYAVGLSRMIG 138
Query: 186 GLTAPADGPYH-VQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G P++ H + P+G+ G I +NFP+ ++ W A+ CGN + K A T L
Sbjct: 139 GPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSL 198
Query: 245 SALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
++ V+K++ + LP + ++ G G G A+A V+ L+FTGST GK V
Sbjct: 199 ISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQVGL 257
Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
+ + LELGG + I EDAD+ A +A GQ C R F+HES++
Sbjct: 258 MVQER-FGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIH 316
Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 420
D+ V + + VG+P+ + GP + L + G + GG+ +
Sbjct: 317 DEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMD 376
Query: 421 AKGYYIKPTVFTGVK 435
G Y++PT+ TG+
Sbjct: 377 RPGNYVEPTIVTGLG 391
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026 | Back alignment and structure |
|---|
Score = 410 bits (1055), Expect = e-134
Identities = 113/374 (30%), Positives = 180/374 (48%), Gaps = 13/374 (3%)
Query: 69 LINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
ING+ V + PT++P + +V+ + + +V A++AA+ AF W
Sbjct: 535 FINGKEVRT--NDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPA--WRDTDPR 590
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
R++ +L+ A + E++A + + GK ++Q A +V YYA ++
Sbjct: 591 TRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQ-AYADVTEAIDFLEYYAREMIRLGQP 649
Query: 188 TAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
P +EP GVA I PWNFPL + A+ GN +V K + T +
Sbjct: 650 QRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIG 709
Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK-- 304
++ +L EAGLP GV N G G G L H ++ +AFTGS TG +++ AAK
Sbjct: 710 WHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVH 769
Query: 305 ---SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
+N+K + E+GGK+ I+ +DAD+D+A Y+ F QGQ C A SR V ++VYD
Sbjct: 770 PGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYD 829
Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 421
+F+E+ ++A VG G D + + I +Y G G L
Sbjct: 830 KFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLY-ESPVPAG 888
Query: 422 KGYYIKPTVFTGVK 435
+GY++ T+ G+K
Sbjct: 889 EGYFVPMTIIGGIK 902
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497 | Back alignment and structure |
|---|
Score = 384 bits (990), Expect = e-130
Identities = 132/375 (35%), Positives = 186/375 (49%), Gaps = 9/375 (2%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
I GQ+V S T L P TG VI + G D A+ A+ A W ++T
Sbjct: 13 KVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKA--WAKLT 70
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A R ++ FA+ + + +A + + GK A+ EV +T Y A I+
Sbjct: 71 ARTRQNMLRTFANKIRENKHILAPMLVAEQGKLLSV-AEMEVDVTATFIDYGCDNALTIE 129
Query: 186 GLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G P+D + P GV I WNFPL + K+GPAL GNT+VLK ++TPL
Sbjct: 130 GDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPL 189
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
+ + ++ EAGLP GVLN+++G G G L + TGST GK + + +A
Sbjct: 190 ATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSA- 248
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
+ PV LELGGK+P +V +DAD+DKAAE A + F N GQ C R +VH SVYD+F+
Sbjct: 249 EYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFM 308
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL----G 420
K L VGDP Q GP+ + + + I + + GA + TGG+
Sbjct: 309 AKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGF 368
Query: 421 AKGYYIKPTVFTGVK 435
G + +PTV VK
Sbjct: 369 EGGCWYEPTVLVDVK 383
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481 | Back alignment and structure |
|---|
Score = 379 bits (976), Expect = e-128
Identities = 139/370 (37%), Positives = 208/370 (56%), Gaps = 5/370 (1%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
Q LING+++D+ +G+ +P GD + V + A++ A+ AA +A W +T
Sbjct: 10 QQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPA--WRALT 67
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A ER+ I+ + +L+ H D++A L T + GKP + A+ E+ ++A +I
Sbjct: 68 AKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAE-AKGEISYAASFIEWFAEEGKRIY 126
Query: 186 GLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G T P + + +PIGV I PWNFP M K GPALA G T+VLK A QTP
Sbjct: 127 GDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPF 186
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
SAL +++L AG+P GV N+V+G G L S+ V KL+FTGST G+ +++ A
Sbjct: 187 SALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCA- 245
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
++K V+LELGG +PFIV +DAD+DKA E A + F N GQ C +R +V + VYD+F
Sbjct: 246 KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFA 305
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 424
EK K +GD G+ GP ID + K+ ++I ++ GA++ GG+ G
Sbjct: 306 EKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGN 365
Query: 425 YIKPTVFTGV 434
+ +PT+ V
Sbjct: 366 FFQPTILVDV 375
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484 | Back alignment and structure |
|---|
Score = 379 bits (976), Expect = e-128
Identities = 145/370 (39%), Positives = 206/370 (55%), Gaps = 5/370 (1%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
Q I G++ + S TF DP TG+ + V + A + RA+ AA+ A+ W T
Sbjct: 13 HQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAG--WRMKT 70
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A ER+ I+ R+ DL+ ++D++A + T + GKP + A+ E+ ++A ++
Sbjct: 71 AKERAAILRRWFDLVIANSDDLALILTTEQGKPLAE-AKGEIAYAASFIEWFAEEGKRVA 129
Query: 186 GLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G T P + + EPIGV I PWNFP M A KVGPALA G IV+K AE TP
Sbjct: 130 GDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPF 189
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
SAL ++ L AG+P GVL++V G G + S+ V KL+FTGST G++++ +A
Sbjct: 190 SALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSA- 248
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
+K +TLELGG +PFIV +DAD+D A E A + + N GQ C +R FVHE VYD F
Sbjct: 249 PTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFA 308
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 424
+K A K VG + G GP I+ +K+ +I + GA L TGG+R
Sbjct: 309 DKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHG 368
Query: 425 YIKPTVFTGV 434
+ +PTV TGV
Sbjct: 369 FFEPTVLTGV 378
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504 | Back alignment and structure |
|---|
Score = 378 bits (972), Expect = e-127
Identities = 140/370 (37%), Positives = 209/370 (56%), Gaps = 7/370 (1%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+Q L+NG+++D+A G T +P G VI V + A+ A+ KA W T
Sbjct: 33 SQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSG--WAAKT 90
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A ER+ I+ ++ DL+ + D+IA + T + GKP + A+ EV ++A A ++
Sbjct: 91 AKERAGILRKWFDLIIANADDIALIMTSEQGKPLAE-ARGEVLYAASFIEWFAEEAKRVY 149
Query: 186 GLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G T PA + + +P+GV I PWNFP M K PALA G T++++ A+ TPL
Sbjct: 150 GDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPL 209
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
+AL + L +AG+P GVL IV+G GA L S+ V KL+FTGST G++++ A
Sbjct: 210 TALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCA- 268
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
+K ++LELGG +PFIV +DAD+D A + A + + N GQ C +R +V VYD+F
Sbjct: 269 PTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFA 328
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 424
EK A + VG+ + G+ GP I+ + K+ +I V GAKL TGG+ LG G
Sbjct: 329 EKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKELG--GL 386
Query: 425 YIKPTVFTGV 434
+ +P + TGV
Sbjct: 387 FFEPGILTGV 396
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506 | Back alignment and structure |
|---|
Score = 377 bits (970), Expect = e-127
Identities = 130/371 (35%), Positives = 185/371 (49%), Gaps = 6/371 (1%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
I G++ DSA G TF +P TG VI V EDV AV A + A
Sbjct: 12 LTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRL--TNPWP 69
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
R K + D L+ + +EI + ++GKP+++ AQ EV F Y A +
Sbjct: 70 IETRRKWLEDIRDGLKENREEIGRILCMEHGKPWKE-AQGEVDYAAGFFDYCAKHISALD 128
Query: 186 GLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
T P + P+GV G I+PWNFP+ M A K+ ALA G V+K A +TPL
Sbjct: 129 SHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPL 188
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
+ + ++ + LP G++N+V G G L H +V L+FTGST G+ ++ A
Sbjct: 189 TMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTA- 247
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
+K + LELGG +PFIV +DAD++ AA+ F GQ C +R FVHE V D F
Sbjct: 248 EQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFG 307
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA-KG 423
+K K VGD GI GP I+ + F+K+ ++++ +D GA L G + G
Sbjct: 308 QKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDG 367
Query: 424 YYIKPTVFTGV 434
+ PTV GV
Sbjct: 368 LFFPPTVVQGV 378
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487 | Back alignment and structure |
|---|
Score = 365 bits (939), Expect = e-123
Identities = 133/374 (35%), Positives = 209/374 (55%), Gaps = 11/374 (2%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
T + G+++ + TFP DP +G + VA+ + AV AA +AF W ++
Sbjct: 13 TDSFVGGRWLPA--AATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCR--WREVS 68
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A ERS ++ ++ +L+ ++ D++A + T ++GKP ++ A E+ + +++ A ++
Sbjct: 69 AKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKE-AHGEILYSAFFLEWFSEEARRVY 127
Query: 186 GLTAPADGPYH-VQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G L +PIGVA I PWNFP M KVG ALA G T+V+K AE TP
Sbjct: 128 GDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPF 187
Query: 245 SALYVSKLLHEAGLPPGVLNIV---SGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
SAL +++L +AG+P GV N++ G A+ + V K++FTGSTTTGKI+L
Sbjct: 188 SALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHH 247
Query: 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
AA +++K V++ELGG +PFIV + A+VD+A A + F N GQ C ++ V ++D
Sbjct: 248 AA-NSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHD 306
Query: 362 QFVEK-ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 420
FV+ A A+ VG+ F+ G QGP I+ + EK+ K + V GA + TGG+R
Sbjct: 307 AFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQ 366
Query: 421 AKGYYIKPTVFTGV 434
+ +PT+ V
Sbjct: 367 LGKNFFEPTLLCNV 380
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510 | Back alignment and structure |
|---|
Score = 359 bits (923), Expect = e-120
Identities = 80/389 (20%), Positives = 136/389 (34%), Gaps = 36/389 (9%)
Query: 75 VDSASGKTFPTLDPRTGDVI-THVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKII 133
++ + F + TG+ + +VN+A +AA K + + R+ +R+ ++
Sbjct: 1 MNPQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARD--FRRLNNSKRASLL 58
Query: 134 LRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADG 193
A LE +D+I A + P + E+ T R +A + A D
Sbjct: 59 RTIASELEARSDDIIARAHLETALPEVR-LTGEIARTANQLRLFADVVNSGSYHQAILDT 117
Query: 194 P---------YHVQTLHEPIGVAGQIIPWNFPLLMFA--WKVGPALACGNTIVLKTAEQT 242
P ++ +G NFPL A ALA G +++K
Sbjct: 118 PNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAH 177
Query: 243 PLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 298
P ++ V++ + +A LP + ++ G G AL SH E+ + FTGS G+ +
Sbjct: 178 PGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRAL 237
Query: 299 LQLAAKS-NLKPVTLELGGKSPFIVCEDADVDKA--AELAHYALFFNQGQCCCAGSRTFV 355
LA + P ELG +P + A KA A+ ++ GQ C F
Sbjct: 238 FNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFA 297
Query: 356 HES-VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLET 414
+ F+E A +L P I + + G D G +
Sbjct: 298 LNTPETQAFIETAQSL------IRQQSPSTLLTPGIRDSYQS---QVVSRGSDDGIDVTF 348
Query: 415 GGERLGAKGYYIKPTVFTGVKVLILISPA 443
+ +F PA
Sbjct: 349 SQAE----SPCVASALFVTSSENWRKHPA 373
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462 | Back alignment and structure |
|---|
Score = 337 bits (867), Expect = e-112
Identities = 100/357 (28%), Positives = 158/357 (44%), Gaps = 5/357 (1%)
Query: 79 SGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFAD 138
+ +++P TG + + A+++ A+S A F + W + +R++ +
Sbjct: 5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKK--WKMTSVAQRAQTLRDIGQ 62
Query: 139 LLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQ 198
L H +E+A T + GKP +Q A+ EV + L +YA +
Sbjct: 63 ALRAHAEEMAQCITREMGKPIKQ-ARAEVTKSAALCDWYAEHGPAMLNPEPTLVENQQAV 121
Query: 199 TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGL 258
+ P+GV I+PWNFPL P L GN+ +LK A A ++++L EAG
Sbjct: 122 IEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIARILAEAGT 181
Query: 259 PPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS 318
P GV V+ + + + TGS G + A LK LELGG
Sbjct: 182 PAGVYGWVNANNEGVSQMIN-DPRIAAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGGSD 239
Query: 319 PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 378
PFIV DAD++ A + A + N GQ C A R V E + F ++ A A +GD
Sbjct: 240 PFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGD 299
Query: 379 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVK 435
P GP + +++ + +++ V GA+L GGE++ +G Y TV V
Sbjct: 300 PLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVT 356
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484 | Back alignment and structure |
|---|
Score = 336 bits (865), Expect = e-111
Identities = 95/354 (26%), Positives = 158/354 (44%), Gaps = 5/354 (1%)
Query: 82 TFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE 141
+ +++P T + ++ ++ A++ A + + W R++I+ A+ L+
Sbjct: 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKK--WRHEEPASRAEILHDIANALK 62
Query: 142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLH 201
H DE+A + T + GK + ++ EV + + YYA ++ T + L
Sbjct: 63 EHEDELAKMMTLEMGKLLSE-SKEEVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLK 121
Query: 202 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPG 261
+ GV PWNFPL P GN I+LK A P SA +K++ AG P G
Sbjct: 122 QSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEG 181
Query: 262 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321
L + +A + +A TGS G V + A K NLK T+ELGG FI
Sbjct: 182 SLINLYPSYDQLADIIA-DPRIQGVALTGSERGGSAVAEAAGK-NLKKSTMELGGNDAFI 239
Query: 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381
V +DAD + + A +N GQ C + R V +S YD+ + + + GDP +
Sbjct: 240 VLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLE 299
Query: 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVK 435
P + EK+ ++ +D GAK+ + +KG + +PT+ T +
Sbjct: 300 ADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIA 353
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452 | Back alignment and structure |
|---|
Score = 313 bits (805), Expect = e-103
Identities = 61/342 (17%), Positives = 121/342 (35%), Gaps = 19/342 (5%)
Query: 97 VAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNG 156
+ +++ ++ +KA +E + + + KI + + +A ++G
Sbjct: 1 MPVTNMAELDAMIARVKKAQEE--FATYSQEQVDKIFRAASLAANQARIPLAQQAVEESG 58
Query: 157 KPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFP 216
+ + F Y ++ G+ D T+ EP+G+ I+P P
Sbjct: 59 MGIVE-DKVIKNHFASEFIYNKYKDEQTCGIL-EEDDNLGTMTIAEPVGIICGIVPTTNP 116
Query: 217 LLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPT 272
+K +L N I+ + S +KL+ +A G P ++ +
Sbjct: 117 TSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVE 176
Query: 273 AGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAA 332
AL H ++ + TG K AA S+ KP G P ++ E AD+ +A
Sbjct: 177 LSNALMKHDDIALILATGGPGMVK-----AAYSSGKPAIGVGAGNVPVVIDETADIKRAV 231
Query: 333 ELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDS 392
+ F+ G C + V + VYD+ E+ + + +++ ID
Sbjct: 232 ASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASHKAHVLSKTDAD-KVRKVLLIDG 290
Query: 393 EQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGV 434
KI+ + + E G ++ A + V
Sbjct: 291 ALNAKIVGQPATAI-----AEMAGVKVPADTKVLIGEGLGKV 327
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 302 bits (776), Expect = 8e-98
Identities = 92/400 (23%), Positives = 140/400 (35%), Gaps = 43/400 (10%)
Query: 66 TQLLINGQFVDSA-SGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRM 124
+ L+ G+++D A + + P P A G E VNRA AA +AF +
Sbjct: 30 GKHLVAGEWLDGAGTFASAPAHGPAHD-----FAVGTVELVNRACEAAEEAFWT--YGYS 82
Query: 125 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA--- 181
+ ER+ + AD +E + I + + + G P + E TT R +A
Sbjct: 83 SRKERAAFLRAIADEIEARAEAITEIGSQETGLPEAR-LNGERGRTTGQLRLFADHIEKG 141
Query: 182 -------DKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLM--FAWKVGPALACGN 232
D PA ++ + P+G NFPL ALA G
Sbjct: 142 DYLDRRVDAAMPERQPAPRQ-EIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGC 200
Query: 233 TIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 288
+V+K P + V++ + A G+ PGV +++ G G AL H + + F
Sbjct: 201 PVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGF 260
Query: 289 TGSTTTGKIVLQLAAKS-NLKPVTLELGGKSPFIVCEDADVDKAAELAH---YALFFNQG 344
TGS G+ + L A P ELG +P + +A +A L +L G
Sbjct: 261 TGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAG 320
Query: 345 QCCCAGSRTFVHESV-YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 403
Q C V E D+F A K GI + + +F
Sbjct: 321 QFCTNPGIAVVIEGADADRFTTAAVEALAKVAPQTMLTDGIAKAYRDGQARFAT------ 374
Query: 404 SGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPA 443
K E + G P +F L A
Sbjct: 375 ---RNAVKPLLATE---SSGRDASPNLFETTGAQFLADHA 408
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001 | Back alignment and structure |
|---|
Score = 307 bits (788), Expect = 4e-95
Identities = 117/402 (29%), Positives = 173/402 (43%), Gaps = 15/402 (3%)
Query: 45 TASSAAAAAEDPITPPVKVDYTQLLINGQFVD---SASGKTFPTLDPRTGDVITHVAEGE 101
AAA I P + N + V+ + T + +A+
Sbjct: 490 AIVRPQAAAHPRIPLPCD-LFAPERRNSRGVEFGARTALDQLLTDVKAETGDLKPIADAT 548
Query: 102 AEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQ 161
+ + AV+AAR F W R A R+ + + A LLE + AL + GK +
Sbjct: 549 PDQAHAAVAAARAGFAG--WSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDD 606
Query: 162 SAQTEVPMTTRLFRYYAGWADKIQGLTAPADGP--YHVQTLHEPIGVAGQIIPWNFPLLM 219
A +E+ RYYA K+ G GP GV I PWNFPL +
Sbjct: 607 -ALSELREAADFCRYYAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAI 665
Query: 220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS 279
F +V AL GN++V K AEQTP A LLHEAG+P L +V+G G GAAL +
Sbjct: 666 FLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDGR-IGAALTA 724
Query: 280 HMEVDKLAFTGSTTTGKIVLQLAAKSN--LKPVTLELGGKSPFIVCEDADVDKAAELAHY 337
H ++ + FTGST + + + A + + P+ E GG + I A ++ A+
Sbjct: 725 HPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVT 784
Query: 338 ALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 397
+ F + GQ C A FV E V D+ +E A + +GDP GP ID E ++
Sbjct: 785 SAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQR 844
Query: 398 ILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLIL 439
+ +I A+L G +G ++ P +F + L
Sbjct: 845 LDAHIARM-KTEARLHFAGPA--PEGCFVAPHIFELTEAGQL 883
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486 | Back alignment and structure |
|---|
Score = 274 bits (702), Expect = 3e-87
Identities = 113/372 (30%), Positives = 183/372 (49%), Gaps = 7/372 (1%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+ ING++V+S + + ++P T +V+ V ED++ A A +AF W ++
Sbjct: 6 LKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKT--WSKVA 63
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
R++I+ F LL +H +E+A L T +NGK ++ A EV + AG +
Sbjct: 64 VPRRARILFNFQQLLSQHKEELAHLITIENGKNTKE-ALGEVGRGIENVEFAAGAPSLMM 122
Query: 186 GLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G + + PIGV G I P+NFP+++ W A+A GNT +LK +E+TPL
Sbjct: 123 GDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPL 182
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
+ +L +AGLP GV N+V G + H E+ ++F GS G+ V + ++
Sbjct: 183 LTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSE 241
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
NLK V G K+ IV DA+++ A F + G+ C A + V E + D+F+
Sbjct: 242 -NLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFM 300
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKG 423
K +G+ G+ GP I + ++ L YI G++ GA+L G G
Sbjct: 301 AKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDG 360
Query: 424 YYIKPTVFTGVK 435
Y++ PT+F V
Sbjct: 361 YFVGPTIFDNVT 372
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521 | Back alignment and structure |
|---|
Score = 268 bits (687), Expect = 1e-84
Identities = 106/395 (26%), Positives = 186/395 (47%), Gaps = 11/395 (2%)
Query: 47 SSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVN 106
SS + + + I+G+ V SG+ +P TG+V VA D+
Sbjct: 8 SSGVDLGTENLYFQSMMYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLA 67
Query: 107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTE 166
AV +A+ A + W R+++ ++F LL + +E+A + + ++GK + A+ +
Sbjct: 68 AAVESAKAAQPK--WAATNPQRRARVFMKFVQLLNDNMNELAEMLSREHGKTIDD-AKGD 124
Query: 167 VPMTTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225
+ + + G + GP + ++ +P+G+ I P+NFP ++ W
Sbjct: 125 IVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFA 184
Query: 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDK 285
PA+ACGN +LK +E+ P + +++L+ EAGLP G+LN+V+G A A+ +H ++
Sbjct: 185 PAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNG-DKGAVDAILTHPDIAA 243
Query: 286 LAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQ 345
++F GST + V AA N K G K+ I+ DAD+D+AA A + + G+
Sbjct: 244 VSFVGSTPIARYVYGTAAM-NGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGE 302
Query: 346 CCCAGSRT-FVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 404
C A S V E ++ ++K + +G GP + E ++I I S
Sbjct: 303 RCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDS 362
Query: 405 GVDGGAKLETGGERL----GAKGYYIKPTVFTGVK 435
G++ GAKL G G++I +F V
Sbjct: 363 GIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVT 397
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563 | Back alignment and structure |
|---|
Score = 258 bits (661), Expect = 3e-80
Identities = 91/374 (24%), Positives = 152/374 (40%), Gaps = 15/374 (4%)
Query: 68 LLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
++ + V + L P + + +NRA+ AA A E W
Sbjct: 66 CVVGDEEVWT--SDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKE--WDLKPM 121
Query: 127 YERSKIILRFADLLE-RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI- 184
+R+++ L+ AD+L E+ A GK Q+ FR+ A +A ++
Sbjct: 122 ADRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELE 181
Query: 185 QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
+ G I P+NF + G GN ++ K ++ L
Sbjct: 182 GEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAI-GGNLAGAPALMGNVVLWKPSDTAML 240
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
++ V ++L EAGLPP ++ V GPT G + S + + FTGS T K + + A+
Sbjct: 241 ASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQ 300
Query: 305 S-----NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
+ + E GGK+ V ADVD + F GQ C A SR +V +S+
Sbjct: 301 NLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSL 360
Query: 360 YDQFVEKANALAMKRVVGDPFKG-GIQQGPQIDSEQFEKILKYIRSG-VDGGAKLETGGE 417
+ Q + + VGDP + G ID++ F +I K++ + GG+
Sbjct: 361 WPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQ 420
Query: 418 RLGAKGYYIKPTVF 431
+ GYY++P +
Sbjct: 421 CNESVGYYVEPCII 434
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464 | Back alignment and structure |
|---|
Score = 248 bits (634), Expect = 2e-77
Identities = 53/329 (16%), Positives = 112/329 (34%), Gaps = 23/329 (6%)
Query: 103 EDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162
++V + +A KA E M+ + I+ AD +++A + + G Q
Sbjct: 12 QEVRNLIESANKAQKE--LAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQD 69
Query: 163 AQTEVPMTTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFA 221
+ ++ + + ++ + + V + P+GV +IP P
Sbjct: 70 KVIKNVFASK---HVYNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVI 126
Query: 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHE----AGLPPGVLNIVSGYGPTAGAAL 277
+K ++ GN+IV + L +++ E AG P G ++ ++ L
Sbjct: 127 YKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQGTDQL 186
Query: 278 ASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHY 337
H + + TG + K AA S+ P G P + A++ +A +
Sbjct: 187 MKHKDTAVILATGGSAMVK-----AAYSSGTPAIGVGPGNGPAFIERSANIPRAVKHILD 241
Query: 338 ALFFNQGQCCCAGSRTFVHESVYDQFVEK--------ANALAMKRVVGDPFKGGIQQGPQ 389
+ F+ G C + V + + + + ++ + P
Sbjct: 242 SKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPA 301
Query: 390 IDSEQFEKILKYIRSGVDGGAKLETGGER 418
I + + I V A++ E
Sbjct: 302 IVGKSVQHIANLAGLTVPADARVLIAEET 330
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469 | Back alignment and structure |
|---|
Score = 193 bits (494), Expect = 8e-57
Identities = 96/343 (27%), Positives = 145/343 (42%), Gaps = 29/343 (8%)
Query: 103 EDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI-AALETWDNGKPFEQ 161
++ AV AR AF G R + + L++ E+ AL D K
Sbjct: 18 SKISEAVKRARAAFSSGRTR--PLQFRIQQLEALQRLIQEQEQELVGALAA-DLHKNEWN 74
Query: 162 SAQTEVPMTTRLFRYY----AGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPL 217
+ EV Y WA P + EP+GV I WN+P
Sbjct: 75 AYYEEVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPF 134
Query: 218 -LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAA 276
L VG A+A GN +VLK +E + A ++ ++ + L + +++G G
Sbjct: 135 NLTIQPMVG-AIAAGNAVVLKPSELSENMASLLATIIPQY-LDKDLYPVING-GVPETTE 191
Query: 277 LASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAH 336
L D + +TGST GKI++ AAK +L PVTLELGGKSP V ++ D+D A
Sbjct: 192 LLKE-RFDHILYTGSTGVGKIIMTAAAK-HLTPVTLELGGKSPCYVDKNCDLDVACRRIA 249
Query: 337 YALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQ----IDS 392
+ F N GQ C A S+ +Q VE +K+ + + + ++ I +
Sbjct: 250 WGKFMNSGQTCVAPDYILCDPSIQNQIVE-----KLKKSLKEFYGEDAKKSRDYGRIISA 304
Query: 393 EQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVK 435
F++++ I G K+ GG A YI PT+ T V
Sbjct: 305 RHFQRVMGLIE-----GQKVAYGGTG-DAATRYIAPTILTDVD 341
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457 | Back alignment and structure |
|---|
Score = 182 bits (465), Expect = 9e-53
Identities = 89/350 (25%), Positives = 145/350 (41%), Gaps = 23/350 (6%)
Query: 92 DVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI-AAL 150
D H+ ++ SA + F R + + R + + + + + +AL
Sbjct: 17 DDDKHMNYLSPAKIDSLFSAQKAYFATRATA--DVGFRKQSLERLKEAVINNKEALYSAL 74
Query: 151 ETWDNGKPFEQSAQTEVPMTTRLFRYY----AGWADKIQGLTAPADGPYHVQTLHEPIGV 206
D GKP + E+ + W + + P + EP GV
Sbjct: 75 AE-DLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGV 133
Query: 207 AGQIIPWNFPL-LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNI 265
I P+N+P+ L +G A+ GNT ++K +E TP ++ + K++ EA P + +
Sbjct: 134 TYIIGPFNYPVNLTLTPLIG-AIIGGNTCIIKPSETTPETSAVIEKIIAEA-FAPEYVAV 191
Query: 266 VSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED 325
+ G G + L S D + FTGS GK+V+Q AAK +L PV LELGGK P IV D
Sbjct: 192 IQG-GRDENSHLLSL-PFDFIFFTGSPNVGKVVMQAAAK-HLTPVVLELGGKCPLIVLPD 248
Query: 326 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 385
AD+D+ + F N GQ A +VH SV D +E + V
Sbjct: 249 ADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLE-----RLVERVKTELPEINS 303
Query: 386 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVK 435
G + Q ++++ + ++ G + + TV GV+
Sbjct: 304 TGKLVTERQVQRLVSLLE---ATQGQVLVGSQA-DVSKRALSATVVDGVE 349
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 459 | |||
| 2wme_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 100.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 100.0 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 100.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 100.0 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 100.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 100.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 100.0 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 100.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 100.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 100.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 100.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 100.0 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 100.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 100.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 100.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 100.0 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 100.0 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 100.0 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 100.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 100.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 100.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 100.0 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 100.0 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 100.0 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 100.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 100.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 100.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 100.0 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 100.0 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 100.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 100.0 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 100.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 100.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 100.0 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 100.0 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 100.0 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 100.0 | |
| 4h7n_A | 474 | Aldehyde dehydrogenase; structural genomics, PSI-b | 100.0 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 100.0 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 100.0 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 100.0 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 100.0 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 100.0 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 100.0 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 100.0 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 100.0 | |
| 2h5g_A | 463 | Delta 1-pyrroline-5-carboxylate synthetase; dehydr | 100.0 | |
| 1vlu_A | 468 | Gamma-glutamyl phosphate reductase; YOR323C, struc | 100.0 | |
| 4ghk_A | 444 | Gamma-glutamyl phosphate reductase; structural gen | 100.0 | |
| 1o20_A | 427 | Gamma-glutamyl phosphate reductase; TM0293, struct | 100.0 | |
| 4gic_A | 423 | HDH, histidinol dehydrogenase; protein structure i | 90.28 |
| >2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-92 Score=737.82 Aligned_cols=393 Identities=40% Similarity=0.677 Sum_probs=377.0
Q ss_pred CccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHc
Q 012658 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (459)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~ 143 (459)
...++||||+|+++.++++++++||+||++|++++.++.+|+++|+++|++||. .|++++..+|.++|++++++|++|
T Consensus 5 ~~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~ 82 (490)
T 2wme_A 5 EEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQK--VWAAMTAMQRSRILRRAVDILRER 82 (490)
T ss_dssp CCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred CCCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHh
Confidence 345899999999988999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHH
Q 012658 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (459)
Q Consensus 144 ~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (459)
.++|++++++|+|||+.++...|+..+++.++||+++++++.+...+...+...++.++|+|||++|+|||||+.+.+++
T Consensus 83 ~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~ 162 (490)
T 2wme_A 83 NDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWK 162 (490)
T ss_dssp HHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCccccccCCcceeEEecceeEEEEeccccCcchhhhhh
Confidence 99999999999999999987667999999999999999998887777666778899999999999999999999999999
Q ss_pred HHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHH
Q 012658 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (459)
Q Consensus 224 l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a 303 (459)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|..||+||+|.||||+.+|+.|++.++
T Consensus 163 ~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a 242 (490)
T 2wme_A 163 SAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASAS 242 (490)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999988899999999999999999999999999987666
Q ss_pred hcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCC
Q 012658 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (459)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~ 383 (459)
.+++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|+|++++
T Consensus 243 ~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~~ 322 (490)
T 2wme_A 243 SSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDEN 322 (490)
T ss_dssp HHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred ccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCcccc
Confidence 55899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccC----CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 384 ~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++||+++..+++++.++|++++++||++++||.... .+|+|++||||.+++++|++++||+||||++|++|+|+
T Consensus 323 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 401 (490)
T 2wme_A 323 TNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDE 401 (490)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCH
T ss_pred CccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCH
Confidence 9999999999999999999999999999999997643 36899999999999999999999999999999999985
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-88 Score=706.62 Aligned_cols=390 Identities=37% Similarity=0.581 Sum_probs=373.4
Q ss_pred ccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 012658 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (459)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~ 144 (459)
..++||||+|+.+.++++++++||.||+++++++.++.+|+++|++.|++||+ .|+.++..+|.++|+++++.|++|.
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 89 (484)
T 3ifg_A 12 RHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWA--GWRMKTAKERAAILRRWFDLVIANS 89 (484)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 45789999999887889999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCC-CCceEEEEEccceEEEEEcCCCchHHhhHHH
Q 012658 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (459)
Q Consensus 145 ~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (459)
++|++++++|+|||+.++. .|+..+++.++||+.+++++.+...+.. .+...++.++|+|||++|+|||||+.+.+++
T Consensus 90 ~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 168 (484)
T 3ifg_A 90 DDLALILTTEQGKPLAEAK-GEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARK 168 (484)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHHH
Confidence 9999999999999999976 5999999999999999888766655533 4567889999999999999999999999999
Q ss_pred HHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHH
Q 012658 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (459)
Q Consensus 224 l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a 303 (459)
+++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|++.+.++.|.+||+||+|.||||+.+|+.|++.++
T Consensus 169 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa 248 (484)
T 3ifg_A 169 VGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSA 248 (484)
T ss_dssp HHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTG
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999998
Q ss_pred hcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCC
Q 012658 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (459)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~ 383 (459)
+ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++++
T Consensus 249 ~-~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 327 (484)
T 3ifg_A 249 P-TVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESG 327 (484)
T ss_dssp G-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred c-cCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 384 ~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++||+++..+++++.++|++++++|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 328 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 402 (484)
T 3ifg_A 328 ATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASE 402 (484)
T ss_dssp CCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCH
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCH
Confidence 999999999999999999999999999999999865557999999999999999999999999999999999985
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-88 Score=708.37 Aligned_cols=390 Identities=41% Similarity=0.753 Sum_probs=370.9
Q ss_pred CceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 012658 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (459)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~ 146 (459)
++||||+|+.+.++++++++||.||+++++++.++.+|+++|++.|++||++|.|+.++..+|.++|++++++|+++.++
T Consensus 38 ~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~e 117 (517)
T 2o2p_A 38 QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEE 117 (517)
T ss_dssp SEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 68999999987667899999999999999999999999999999999999866799999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCC----CCCceEEEEEccceEEEEEcCCCchHHhhHH
Q 012658 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA----DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (459)
Q Consensus 147 l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (459)
|++++++|+|||+.++...|+..+++.++||+++++++.+...+. ..+...++.++|+|||++|+|||||+.+.++
T Consensus 118 la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 197 (517)
T 2o2p_A 118 LATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSW 197 (517)
T ss_dssp HHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHHH
Confidence 999999999999999864699999999999999998876655443 2233678999999999999999999999999
Q ss_pred HHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHH
Q 012658 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (459)
Q Consensus 223 ~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~ 302 (459)
++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|.+.+.+..|..|++|++|.||||+.+|+.|++.+
T Consensus 198 ~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~a 277 (517)
T 2o2p_A 198 KTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 277 (517)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998788899999999999999999999999999999
Q ss_pred H-hcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCC
Q 012658 303 A-KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381 (459)
Q Consensus 303 a-~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~ 381 (459)
+ + ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++
T Consensus 278 a~~-~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~ 356 (517)
T 2o2p_A 278 ALS-NVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLE 356 (517)
T ss_dssp HHH-TCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTS
T ss_pred HHh-cCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 8 6 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCC
Q 012658 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGEN 457 (459)
Q Consensus 382 ~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~ 457 (459)
+++++||+++..+++++.++|++++++||++++||.....+|+|++||||.+++++|++++||+||||++|++|+|
T Consensus 357 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 432 (517)
T 2o2p_A 357 RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFAD 432 (517)
T ss_dssp TTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECT
T ss_pred CCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCC
Confidence 9999999999999999999999999999999999976444699999999999999999999999999999999998
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-87 Score=705.59 Aligned_cols=392 Identities=33% Similarity=0.515 Sum_probs=375.3
Q ss_pred CCccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHH
Q 012658 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (459)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~ 142 (459)
+...++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|++
T Consensus 9 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 86 (506)
T 3rh9_A 9 LENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALR--LTNPWPIETRRKWLEDIRDGLKE 86 (506)
T ss_dssp GSCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCC--SSSCCCHHHHHHHHHHHHHHHHH
T ss_pred ccccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 3455899999999887889999999999999999999999999999999999999 99999999999999999999999
Q ss_pred cHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEE-ccceEEEEEcCCCchHHhhH
Q 012658 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLH-EPIGVAGQIIPWNFPLLMFA 221 (459)
Q Consensus 143 ~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~-~P~GVv~~i~p~n~P~~~~~ 221 (459)
|.++|++++++|+|||+.++. .|+..+++.++|++++++++.+...+...+...++.+ +|+|||++|+|||||+.+.+
T Consensus 87 ~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 165 (506)
T 3rh9_A 87 NREEIGRILCMEHGKPWKEAQ-GEVDYAAGFFDYCAKHISALDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIA 165 (506)
T ss_dssp THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGGCCEECSCCGGGCEEEEEEEECCSEEEECCSSSTTHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCceeeEeecccceEEEEECCCchHHHHHH
Confidence 999999999999999999987 6999999999999999998877766654566788889 99999999999999999999
Q ss_pred HHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHH
Q 012658 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (459)
Q Consensus 222 ~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 301 (459)
+++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|.+.+.+..|++||+||+|.||||+.+|+.|++.
T Consensus 166 ~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~ 245 (506)
T 3rh9_A 166 KKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVD 245 (506)
T ss_dssp HHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred HHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCC
Q 012658 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381 (459)
Q Consensus 302 ~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~ 381 (459)
+++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++
T Consensus 246 aa~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 324 (506)
T 3rh9_A 246 TAE-QVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMN 324 (506)
T ss_dssp TTT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTS
T ss_pred hhh-cCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 887 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCC-CCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA-KGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 382 ~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~-~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++++||+++..+++++.++|++++++||++++||...+. .|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 325 ~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 402 (506)
T 3rh9_A 325 DGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTE 402 (506)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred cCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCH
Confidence 9999999999999999999999999999999999976433 7999999999999999999999999999999999985
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-87 Score=706.95 Aligned_cols=390 Identities=36% Similarity=0.608 Sum_probs=373.2
Q ss_pred ccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhc--cCCCCCCCCHHHHHHHHHHHHHHHHH
Q 012658 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAF--DEGPWPRMTAYERSKIILRFADLLER 142 (459)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~--~~g~W~~~~~~~R~~iL~~~a~~l~~ 142 (459)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|++.|++|| . .|+.++..+|.++|+++++.|++
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~--~w~~~~~~~R~~~L~~~a~~l~~ 109 (520)
T 3ed6_A 32 SQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESG--EWSQETAETRGKKVRAIADKIKE 109 (520)
T ss_dssp CCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHT--TTTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcccc--ccccCCHHHHHHHHHHHHHHHHH
Confidence 4578999999988788999999999999999999999999999999999999 8 99999999999999999999999
Q ss_pred cHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCC-CCceEEEEEccceEEEEEcCCCchHHhhH
Q 012658 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221 (459)
Q Consensus 143 ~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 221 (459)
+.++|++++++|+|||+.++. .|+..+++.++||+++++++.+...+.. .+...++.++|+|||++|+|||||+.+.+
T Consensus 110 ~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 188 (520)
T 3ed6_A 110 HREALARLETLDTGKTLEESY-ADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQAS 188 (520)
T ss_dssp THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccCccEEEEECCCccHHHHHH
Confidence 999999999999999999987 5999999999999999988776655543 46678899999999999999999999999
Q ss_pred HHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHH
Q 012658 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (459)
Q Consensus 222 ~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 301 (459)
+++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|++.+.++.|.+||+||+|.||||+.+|+.|++.
T Consensus 189 ~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~ 268 (520)
T 3ed6_A 189 WKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKN 268 (520)
T ss_dssp HHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred HHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCC
Q 012658 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381 (459)
Q Consensus 302 ~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~ 381 (459)
+++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|
T Consensus 269 aa~-~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d 347 (520)
T 3ed6_A 269 AAN-NVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFD 347 (520)
T ss_dssp HHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTS
T ss_pred hhh-cCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 987 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccC----CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCC
Q 012658 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGEN 457 (459)
Q Consensus 382 ~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~ 457 (459)
+++++||++++.+++++.++|++++++||++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 348 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 427 (520)
T 3ed6_A 348 ADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFET 427 (520)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCC
Confidence 999999999999999999999999999999999997642 4699999999999999999999999999999999998
Q ss_pred C
Q 012658 458 F 458 (459)
Q Consensus 458 ~ 458 (459)
+
T Consensus 428 ~ 428 (520)
T 3ed6_A 428 E 428 (520)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-87 Score=702.12 Aligned_cols=394 Identities=54% Similarity=0.916 Sum_probs=373.1
Q ss_pred ccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCC-CCCCCCHHHHHHHHHHHHHHHHHc
Q 012658 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERH 143 (459)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g-~W~~~~~~~R~~iL~~~a~~l~~~ 143 (459)
..++||||+|+.+.++++++++||.||+++++++.++.+|++++++.|++||++| .|+.++..+|.++|+++++.|++|
T Consensus 20 ~~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (501)
T 1bxs_A 20 YTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERD 99 (501)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred ccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHH
Confidence 3468999999987678899999999999999999999999999999999999853 699999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHH
Q 012658 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (459)
Q Consensus 144 ~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (459)
.++|++++++|+|||+.++...|+..+++.++||+++++++.+...+...+...+..++|+|||++|+|||||+...+++
T Consensus 100 ~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 179 (501)
T 1bxs_A 100 RLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWK 179 (501)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeeccCCcceeEEecCCceEEEECCCcchHHHHHHH
Confidence 99999999999999998876679999999999999999887766555444556789999999999999999999999999
Q ss_pred HHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHH
Q 012658 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (459)
Q Consensus 224 l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a 303 (459)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.+.+..|.+||+||+|.||||+.+|+.|++.++
T Consensus 180 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa 259 (501)
T 1bxs_A 180 IGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAG 259 (501)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999998
Q ss_pred hcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCC
Q 012658 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (459)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~ 383 (459)
..++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|++
T Consensus 260 ~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 339 (501)
T 1bxs_A 260 KSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPG 339 (501)
T ss_dssp HTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTT
T ss_pred hccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCcccC
Confidence 23899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 384 ~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++||++++.+++++.++|++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 340 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 414 (501)
T 1bxs_A 340 VSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSL 414 (501)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred CccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCH
Confidence 999999999999999999999999999999999765446999999999999999999999999999999999985
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-87 Score=701.48 Aligned_cols=393 Identities=35% Similarity=0.564 Sum_probs=372.6
Q ss_pred CccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHc
Q 012658 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (459)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~ 143 (459)
.+.++||||+|+.+.++++++++||.||+++++++.++.+|++++++.|++||++|.|+.++..+|.++|+++++.|++|
T Consensus 7 ~~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~ 86 (495)
T 3b4w_A 7 EYDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAER 86 (495)
T ss_dssp ECSSEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHH
Confidence 44578999999987678899999999999999999999999999999999999866799999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHH
Q 012658 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (459)
Q Consensus 144 ~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (459)
.++|++++++|+|||+.++...|+..+++.++||+++++++.+...+.+.+...+..++|+|||++|+|||||+...+++
T Consensus 87 ~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 166 (495)
T 3b4w_A 87 KDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNK 166 (495)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceEEEEEccCceEEEECCCcchHHHHHHH
Confidence 99999999999999999986469999999999999999887766544333456789999999999999999999999999
Q ss_pred HHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHH
Q 012658 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (459)
Q Consensus 224 l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a 303 (459)
+++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+| +.+.+..|++|++||+|.||||+.+|+.|++.++
T Consensus 167 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa 245 (495)
T 3b4w_A 167 IAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRAA 245 (495)
T ss_dssp HHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999 8889999999999999999999999999999998
Q ss_pred hcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCC
Q 012658 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (459)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~ 383 (459)
+ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++++
T Consensus 246 ~-~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 324 (495)
T 3b4w_A 246 E-MLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPA 324 (495)
T ss_dssp H-TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTT
T ss_pred h-cCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCC
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccC--CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 384 ~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++||+++..+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 325 ~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 401 (495)
T 3b4w_A 325 AQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTE 401 (495)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSH
T ss_pred CccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCH
Confidence 9999999999999999999999999999999997643 36999999999999999999999999999999999985
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-87 Score=701.49 Aligned_cols=391 Identities=34% Similarity=0.557 Sum_probs=372.8
Q ss_pred CCccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHH
Q 012658 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (459)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~ 142 (459)
+...++||||+|+.+.++ +++++||.||+++++++.++.+|+++|++.|++||+ .|+.++..+|.++|+++++.|++
T Consensus 23 ~~~~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 99 (498)
T 4f3x_A 23 MMDTQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFV--GWSQTTPAERSNALLKIADAIEK 99 (498)
T ss_dssp CCCCCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHH
T ss_pred ccccCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 345589999999987666 999999999999999999999999999999999999 99999999999999999999999
Q ss_pred cHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCC-CCCceEEEEEccceEEEEEcCCCchHHhhH
Q 012658 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221 (459)
Q Consensus 143 ~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 221 (459)
|.++|++++++|+|||+.++...|+..+++.++||+++++++.+...+. ..+...++.++|+|||++|+|||||+.+.+
T Consensus 100 ~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 179 (498)
T 4f3x_A 100 EADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMA 179 (498)
T ss_dssp THHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHHHHH
Confidence 9999999999999999999845799999999999999998876655442 245678899999999999999999999999
Q ss_pred HHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHH
Q 012658 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (459)
Q Consensus 222 ~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 301 (459)
+++++||++||+||+|||+.+|+++..|++++.++ +|+|++|+|+|++.+.++.|+.||+||+|.||||+.+|+.|++.
T Consensus 180 ~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~ 258 (498)
T 4f3x_A 180 WKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAA 258 (498)
T ss_dssp HHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999 99999999999888899999999999999999999999999999
Q ss_pred HHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCC
Q 012658 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381 (459)
Q Consensus 302 ~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~ 381 (459)
+++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|
T Consensus 259 aa~-~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d 337 (498)
T 4f3x_A 259 AAK-TVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDD 337 (498)
T ss_dssp HHT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSG
T ss_pred HHh-hCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCcc
Confidence 987 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCHHHHHHHHHHHHHHHhCCC-eEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGA-KLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 382 ~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga-~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++++||+++..+++++.++|++++++|+ ++++||...+.+|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 338 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 415 (498)
T 4f3x_A 338 TENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGK 415 (498)
T ss_dssp GGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTT
T ss_pred ccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCH
Confidence 99999999999999999999999999999 999999865567999999999999999999999999999999999986
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-87 Score=701.94 Aligned_cols=388 Identities=36% Similarity=0.607 Sum_probs=371.4
Q ss_pred ccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 012658 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (459)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~ 144 (459)
..++||||+|+.+.++++++++||.||+++++++.++.+|+++|++.|++||+ .|+.++..+|.++|+++++.|+++.
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 109 (504)
T 3ek1_A 32 KSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALS--GWAAKTAKERAGILRKWFDLIIANA 109 (504)
T ss_dssp CSSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHHH
Confidence 44789999999887889999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCC-CCceEEEEEccceEEEEEcCCCchHHhhHHH
Q 012658 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (459)
Q Consensus 145 ~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (459)
++|++++++|+|||+.++.. |+..+++.++||+.+++++.+...+.. .+...++.++|+|||++|+|||||+.+.+++
T Consensus 110 ~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 188 (504)
T 3ek1_A 110 DDIALIMTSEQGKPLAEARG-EVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRK 188 (504)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHH
Confidence 99999999999999999764 999999999999999988766655433 3567889999999999999999999999999
Q ss_pred HHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHH
Q 012658 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (459)
Q Consensus 224 l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a 303 (459)
+++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|.+.+.++.|.+||+||+|.||||+.+|+.|++.++
T Consensus 189 ~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa 268 (504)
T 3ek1_A 189 AAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCA 268 (504)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHG
T ss_pred HHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999998
Q ss_pred hcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCC
Q 012658 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (459)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~ 383 (459)
+ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++++
T Consensus 269 ~-~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 347 (504)
T 3ek1_A 269 P-TIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPG 347 (504)
T ss_dssp G-GTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred h-hcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCcccc
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 384 ~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++||+++..+++++.++|++++++|+++++||.. .+|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 348 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 420 (504)
T 3ek1_A 348 VVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE--LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTE 420 (504)
T ss_dssp CCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE--EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCH
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCH
Confidence 99999999999999999999999999999999975 35899999999999999999999999999999999985
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-87 Score=702.54 Aligned_cols=390 Identities=40% Similarity=0.676 Sum_probs=374.0
Q ss_pred ccCceecCEeeeCCCCCeeeeeCCCC-CCEEEEEecCCHHHHHHHHHHHHHhc--cCCCCCCCCHHHHHHHHHHHHHHHH
Q 012658 65 YTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAF--DEGPWPRMTAYERSKIILRFADLLE 141 (459)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~dv~~av~~A~~A~--~~g~W~~~~~~~R~~iL~~~a~~l~ 141 (459)
..++||||+|+.+.++++++++||.| |+++++++.++.+|++++++.|++|| . .|+.++..+|.++|+++++.|+
T Consensus 22 ~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~--~w~~~~~~~R~~~L~~~a~~l~ 99 (528)
T 3u4j_A 22 RYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAG--PWPRMSGAERSRLMFKVADLIL 99 (528)
T ss_dssp BCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTS--SGGGSCHHHHHHHHHHHHHHHH
T ss_pred ccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhcccc--ccccCCHHHHHHHHHHHHHHHH
Confidence 45799999999887889999999999 99999999999999999999999999 7 8999999999999999999999
Q ss_pred HcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCC-CCceEEEEEccceEEEEEcCCCchHHhh
Q 012658 142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMF 220 (459)
Q Consensus 142 ~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~ 220 (459)
++.++|++++++|+|||+.++ ..|+..+++.++|++++++++.+...+.. .+...++.++|+|||++|+|||||+...
T Consensus 100 ~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 178 (528)
T 3u4j_A 100 ARQEELALIESLEVGKPIAQA-RGEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIA 178 (528)
T ss_dssp HTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHHHH
Confidence 999999999999999999998 57999999999999999988876665544 4667899999999999999999999999
Q ss_pred HHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHH
Q 012658 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (459)
Q Consensus 221 ~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 300 (459)
++++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|.+.+.+..|+.||+||+|.||||+.+|+.|++
T Consensus 179 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~ 258 (528)
T 3u4j_A 179 SERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGE 258 (528)
T ss_dssp HHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988889999999999999999999999999999
Q ss_pred HHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCC
Q 012658 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380 (459)
Q Consensus 301 ~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~ 380 (459)
.+++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+
T Consensus 259 ~aa~-~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~ 337 (528)
T 3u4j_A 259 IAAR-TVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPL 337 (528)
T ss_dssp HHHT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTT
T ss_pred HHHh-cCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCC
Confidence 9887 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCC-CCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 381 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA-KGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 381 ~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~-~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++++++||+++..+++++.++|++++++||++++||..... +|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 338 ~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 416 (528)
T 3u4j_A 338 NERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTA 416 (528)
T ss_dssp STTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSH
T ss_pred CcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCH
Confidence 99999999999999999999999999999999999976543 7999999999999999999999999999999999985
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-87 Score=700.51 Aligned_cols=392 Identities=57% Similarity=0.953 Sum_probs=371.4
Q ss_pred CceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCC-CCCCCCHHHHHHHHHHHHHHHHHcHH
Q 012658 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHND 145 (459)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g-~W~~~~~~~R~~iL~~~a~~l~~~~~ 145 (459)
++||||+|+.+.++++++++||.||+++++++.++.+|++++++.|++||++| .|+.++..+|.++|+++++.|++|.+
T Consensus 21 ~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 100 (500)
T 1o04_A 21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRT 100 (500)
T ss_dssp SEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 58999999987678899999999999999999999999999999999999742 59999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHH
Q 012658 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225 (459)
Q Consensus 146 ~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 225 (459)
+|++++++|+|||+.++...|+..+++.++||+++++++.+...+...+...++.++|+|||++|+|||||+.+.+++++
T Consensus 101 ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a 180 (500)
T 1o04_A 101 YLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLG 180 (500)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceecCCCceEEEEEecCCcEEEECCCCchHHHHHHHHH
Confidence 99999999999999887667999999999999999888766554544455678999999999999999999999999999
Q ss_pred HHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhc
Q 012658 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305 (459)
Q Consensus 226 ~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~ 305 (459)
+||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|.+.+.+..|..||+||+|.||||+.+|+.|++.++..
T Consensus 181 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~ 260 (500)
T 1o04_A 181 PALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSS 260 (500)
T ss_dssp HHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHT
T ss_pred HHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhh
Confidence 99999999999999999999999999999999999999999998888999999999999999999999999999999823
Q ss_pred CCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCc
Q 012658 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 385 (459)
Q Consensus 306 ~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~ 385 (459)
++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++++++
T Consensus 261 ~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~ 340 (500)
T 1o04_A 261 NLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTE 340 (500)
T ss_dssp TCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCS
T ss_pred cCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 386 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 386 ~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+||+++..+++++.++|++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 341 ~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 413 (500)
T 1o04_A 341 QGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTI 413 (500)
T ss_dssp BCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred cCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCH
Confidence 9999999999999999999999999999999764346999999999999999999999999999999999985
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-86 Score=697.74 Aligned_cols=394 Identities=39% Similarity=0.672 Sum_probs=372.6
Q ss_pred CCccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCC---CCCCCCHHHHHHHHHHHHHH
Q 012658 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG---PWPRMTAYERSKIILRFADL 139 (459)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g---~W~~~~~~~R~~iL~~~a~~ 139 (459)
+...++||||+|+.+.++++++++||+||+++++++.++.+|+++|++.|++||.+| .|+.++..+|.++|+++++.
T Consensus 5 ~~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~ 84 (503)
T 3iwj_A 5 IPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAK 84 (503)
T ss_dssp CCCCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHH
T ss_pred CCCCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHH
Confidence 344579999999988788999999999999999999999999999999999999843 79999999999999999999
Q ss_pred HHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCccc---CC-CCCceEEEEEccceEEEEEcCCCc
Q 012658 140 LERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA---PA-DGPYHVQTLHEPIGVAGQIIPWNF 215 (459)
Q Consensus 140 l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~---~~-~~~~~~~~~~~P~GVv~~i~p~n~ 215 (459)
|++|.++|++++++|+|||+.++. .|+..+++.++||+.+++++.+... +. ..+...++.++|+|||++|+||||
T Consensus 85 l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~ 163 (503)
T 3iwj_A 85 VTEKKPELAKLESIDCGKPLDEAA-WDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNY 163 (503)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSS
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCch
Confidence 999999999999999999999975 5999999999999999988765431 11 235678899999999999999999
Q ss_pred hHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHH
Q 012658 216 PLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG 295 (459)
Q Consensus 216 P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g 295 (459)
|+.+.++++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|++.+.+..|..|++||+|.||||+++|
T Consensus 164 P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G 243 (503)
T 3iwj_A 164 PMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATG 243 (503)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHH
T ss_pred HHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHH
Confidence 99999999999999999999999999999999999999999999999999999888899999999999999999999999
Q ss_pred HHHHHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhc
Q 012658 296 KIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 375 (459)
Q Consensus 296 ~~i~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~ 375 (459)
+.|++.+++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus 244 ~~i~~~aa~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 322 (503)
T 3iwj_A 244 SKIMTAAAQ-LVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIK 322 (503)
T ss_dssp HHHHHHHGG-GTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHhc-CCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhcc
Confidence 999999887 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccC--CCCceEecEEEeeCCCCCCCcCcCCCcceEEEE
Q 012658 376 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKVLILISPASISPNILHTF 453 (459)
Q Consensus 376 vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~ 453 (459)
+|+|+++++++||++++.+++++.++|++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|+
T Consensus 323 ~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 402 (503)
T 3iwj_A 323 ISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVK 402 (503)
T ss_dssp BSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred CCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEE
Confidence 999999999999999999999999999999999999999997643 579999999999999999999999999999999
Q ss_pred ecCCC
Q 012658 454 NGENF 458 (459)
Q Consensus 454 ~~~~~ 458 (459)
+|+|+
T Consensus 403 ~~~~~ 407 (503)
T 3iwj_A 403 TFSTE 407 (503)
T ss_dssp EESSH
T ss_pred EeCCH
Confidence 99985
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-86 Score=697.14 Aligned_cols=394 Identities=32% Similarity=0.537 Sum_probs=368.1
Q ss_pred CCCCCccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHH
Q 012658 60 PVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADL 139 (459)
Q Consensus 60 ~~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~ 139 (459)
..+....++||||+|+.+.++++++++||.||+++++++.++.+|+++|++.|++||+ .|+.++..+|.++|+++++.
T Consensus 20 ~~m~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~ 97 (497)
T 3i44_A 20 GSMLNKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQ--TWKTTSPHERLGFVEKILEI 97 (497)
T ss_dssp --CEEECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHH
T ss_pred cccccccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHH
Confidence 3334567899999999987888999999999999999999999999999999999999 99999999999999999999
Q ss_pred HHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEE-EccceEEEEEcCCCchHH
Q 012658 140 LERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTL-HEPIGVAGQIIPWNFPLL 218 (459)
Q Consensus 140 l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~-~~P~GVv~~i~p~n~P~~ 218 (459)
|+++.++|++++++|+|||+.++...|+..+++.+++++...+.......+. .+...++. ++|+|||++|+|||||+.
T Consensus 98 l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~ 176 (497)
T 3i44_A 98 YEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALI-EGNEQAILHYDAIGVVGLITPWNWPMN 176 (497)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEESS-TTCSSCEEEEEECCEEEEECCSSSHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccc-CCceeEEEeecCceEEEEECCCcchHH
Confidence 9999999999999999999999875799999999999998776643322221 13445677 999999999999999999
Q ss_pred hhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHH
Q 012658 219 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 298 (459)
Q Consensus 219 ~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 298 (459)
+.++++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|++.+.+..|++||+||+|.||||+.+|+.|
T Consensus 177 ~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i 256 (497)
T 3i44_A 177 QVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDI 256 (497)
T ss_dssp HHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888999999999999999999999999999
Q ss_pred HHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCC
Q 012658 299 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 378 (459)
Q Consensus 299 ~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~ 378 (459)
++.+++ ++||+++|||||||+||++||| |.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 257 ~~~aa~-~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~ 334 (497)
T 3i44_A 257 SKNASN-TLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGP 334 (497)
T ss_dssp HHHHHT-TTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCC
T ss_pred HHHHhh-cCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCC
Confidence 999987 8999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCc-ccC--CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEec
Q 012658 379 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE-RLG--AKGYYIKPTVFTGVKVLILISPASISPNILHTFNG 455 (459)
Q Consensus 379 p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~-~~~--~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~ 455 (459)
|+|+++++||++++.+++++.++|++++++||++++||. ... ..|+|++|||+.+++++|++++||+||||++|++|
T Consensus 335 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~ 414 (497)
T 3i44_A 335 GHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPF 414 (497)
T ss_dssp TTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred CCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEec
Confidence 999999999999999999999999999999999999994 322 26999999999999999999999999999999999
Q ss_pred CCC
Q 012658 456 ENF 458 (459)
Q Consensus 456 ~~~ 458 (459)
+|+
T Consensus 415 ~~~ 417 (497)
T 3i44_A 415 NTE 417 (497)
T ss_dssp SSH
T ss_pred CCH
Confidence 985
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-86 Score=698.35 Aligned_cols=394 Identities=34% Similarity=0.550 Sum_probs=372.7
Q ss_pred CCCCccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHH
Q 012658 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLL 140 (459)
Q Consensus 61 ~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l 140 (459)
.+....++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|
T Consensus 8 ~~~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l 85 (497)
T 3k2w_A 8 LHFKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQK--AWAKLTARTRQNMLRTFANKI 85 (497)
T ss_dssp CCCCTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHH
T ss_pred ccccccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHH
Confidence 445566899999999987889999999999999999999999999999999999999 999999999999999999999
Q ss_pred HHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCC-CCCceEEEEEccceEEEEEcCCCchHHh
Q 012658 141 ERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLM 219 (459)
Q Consensus 141 ~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 219 (459)
+++.++|++++++|+|||+.++. .|+..+++.++|++.+++++.+...+. ..+...++.++|+|||++|+|||||+..
T Consensus 86 ~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~ 164 (497)
T 3k2w_A 86 RENKHILAPMLVAEQGKLLSVAE-MEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLAL 164 (497)
T ss_dssp HTTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHH
Confidence 99999999999999999999986 599999999999999988877655443 2466788999999999999999999999
Q ss_pred hHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHH
Q 012658 220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299 (459)
Q Consensus 220 ~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 299 (459)
.++++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|.+.+.+..|+.||+||+|.||||+.+|+.|+
T Consensus 165 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~ 244 (497)
T 3k2w_A 165 AGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIY 244 (497)
T ss_dssp HHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCC
Q 012658 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379 (459)
Q Consensus 300 ~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p 379 (459)
+.+++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 245 ~~aa~-~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p 323 (497)
T 3k2w_A 245 KTSAE-YMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDP 323 (497)
T ss_dssp HHHTT-TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCT
T ss_pred HHhhh-cCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence 99987 89999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcc--cCC--CCceEecEEEeeCCCCCCCcCcCCCcceEEEEec
Q 012658 380 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER--LGA--KGYYIKPTVFTGVKVLILISPASISPNILHTFNG 455 (459)
Q Consensus 380 ~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~--~~~--~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~ 455 (459)
+++++++||+++..+++++.++|++++++||++++||.. ... +|+|++|||+.+++++|++++||+||||++|++|
T Consensus 324 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~ 403 (497)
T 3k2w_A 324 MDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKV 403 (497)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred CCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEe
Confidence 999999999999999999999999999999999999973 222 6899999999999999999999999999999999
Q ss_pred CCC
Q 012658 456 ENF 458 (459)
Q Consensus 456 ~~~ 458 (459)
+|+
T Consensus 404 ~~~ 406 (497)
T 3k2w_A 404 SSM 406 (497)
T ss_dssp SCH
T ss_pred CCH
Confidence 985
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-86 Score=695.17 Aligned_cols=390 Identities=34% Similarity=0.619 Sum_probs=369.5
Q ss_pred CccCceecCEeeeCCCCCe-eeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHH
Q 012658 64 DYTQLLINGQFVDSASGKT-FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (459)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~-~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~ 142 (459)
...++||||+|+.+.++++ ++++||.||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|++
T Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 95 (503)
T 1a4s_A 18 TDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL--KWSKMAGIERSRVMLEAARIIRE 95 (503)
T ss_dssp CSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHH
T ss_pred cccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHH
Confidence 3457899999998767788 99999999999999999999999999999999999 99999999999999999999999
Q ss_pred cHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHH
Q 012658 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (459)
Q Consensus 143 ~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (459)
|.++|++++++|+|||+.++. .|+..+++.++||+++++++.+...+...+...++.++|+|||++|+|||||+...++
T Consensus 96 ~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 174 (503)
T 1a4s_A 96 RRDNIAKLEVINNGKTITEAE-YDIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAW 174 (503)
T ss_dssp THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccCCCCceeEEEEecCceEEEECCCcchHHHHHH
Confidence 999999999999999999875 5999999999999999988766544433344678999999999999999999999999
Q ss_pred HHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHH
Q 012658 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (459)
Q Consensus 223 ~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~ 302 (459)
++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+ +.+..|..||+||+|.||||+.+|+.|++.+
T Consensus 175 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~a 253 (503)
T 1a4s_A 175 KCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVMEMS 253 (503)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999977 8899999999999999999999999999999
Q ss_pred HhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCC
Q 012658 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 382 (459)
Q Consensus 303 a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~ 382 (459)
++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++
T Consensus 254 a~-~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 332 (503)
T 1a4s_A 254 AK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLT 332 (503)
T ss_dssp HT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTST
T ss_pred hh-cCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCccc
Confidence 87 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCccc--C----CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecC
Q 012658 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL--G----AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGE 456 (459)
Q Consensus 383 ~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~--~----~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~ 456 (459)
++++||+++..+++++.++|++++++|+++++||... . .+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 333 ~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 412 (503)
T 1a4s_A 333 ETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFD 412 (503)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEEC
T ss_pred CCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecC
Confidence 9999999999999999999999999999999999764 2 368999999999999999999999999999999999
Q ss_pred CC
Q 012658 457 NF 458 (459)
Q Consensus 457 ~~ 458 (459)
|+
T Consensus 413 ~~ 414 (503)
T 1a4s_A 413 TE 414 (503)
T ss_dssp CH
T ss_pred CH
Confidence 85
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-86 Score=698.12 Aligned_cols=388 Identities=35% Similarity=0.608 Sum_probs=369.9
Q ss_pred CCccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHH
Q 012658 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (459)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~ 142 (459)
....++||||+|+.+.++++++++||+||+++++++.++.+|+++|++.|++||. .|+.++..+|.++|+++++.|++
T Consensus 12 ~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 89 (517)
T 3r31_A 12 QPKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQK--EWAAMSPMARGRILKRAADIMRE 89 (517)
T ss_dssp CCSSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHH
T ss_pred ccccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHH
Confidence 3456899999999887889999999999999999999999999999999999999 99999999999999999999999
Q ss_pred cHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhh----hcCcccCCCCCceEEEEEccceEEEEEcCCCchHH
Q 012658 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK----IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLL 218 (459)
Q Consensus 143 ~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~----~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~ 218 (459)
+.++|++++++|+|||+.++ |+..+++.++||+.++++ +.+...+...+. .++.++|+|||++|+|||||+.
T Consensus 90 ~~~ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~~~~-~~~~~~P~GVV~~I~PwN~P~~ 165 (517)
T 3r31_A 90 RNDALSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAPSALNGDYIPLGGDF-AYTKRVPLGVCVGIGAWNYPQQ 165 (517)
T ss_dssp THHHHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEECSSSE-EEEEEEECSEEEEECCSSSHHH
T ss_pred HHHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhccccccCcccccCCCc-ceEEEcCccEEEEECCCcchHH
Confidence 99999999999999999886 999999999999999988 766665544455 8999999999999999999999
Q ss_pred hhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHH
Q 012658 219 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 298 (459)
Q Consensus 219 ~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 298 (459)
..++++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+| +.+.+..|+.||+||+|.||||+.+|+.|
T Consensus 166 ~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i 244 (517)
T 3r31_A 166 IACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPTGRKV 244 (517)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEEEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcCEEeccCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999 78899999999999999999999999999
Q ss_pred HHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCC
Q 012658 299 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 378 (459)
Q Consensus 299 ~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~ 378 (459)
++.+++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 245 ~~~aa~-~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 323 (517)
T 3r31_A 245 AAAAAG-HLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGD 323 (517)
T ss_dssp HHHHHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCC
T ss_pred HHHhhc-CCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCC
Confidence 999987 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCccc---CCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEec
Q 012658 379 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL---GAKGYYIKPTVFTGVKVLILISPASISPNILHTFNG 455 (459)
Q Consensus 379 p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~---~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~ 455 (459)
|+++++++||++++.+++++.++|++++++|+++++||... ..+|+|++|||+.+++++|++++||+||||++|++|
T Consensus 324 p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~ 403 (517)
T 3r31_A 324 PLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDF 403 (517)
T ss_dssp TTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEE
T ss_pred CCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEe
Confidence 99999999999999999999999999999999999999312 136999999999999999999999999999999999
Q ss_pred CCC
Q 012658 456 ENF 458 (459)
Q Consensus 456 ~~~ 458 (459)
+|+
T Consensus 404 ~~~ 406 (517)
T 3r31_A 404 DDE 406 (517)
T ss_dssp CCH
T ss_pred CCH
Confidence 985
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-85 Score=695.49 Aligned_cols=387 Identities=33% Similarity=0.542 Sum_probs=370.5
Q ss_pred ccCceecCEeeeCCCCCeeeeeCCCC-CCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHc
Q 012658 65 YTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (459)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~ 143 (459)
..++||||+|+. ++++++++||.| |+++++++.++.+|+++|++.|++||. .|+.++..+|.++|+++++.|+++
T Consensus 37 ~~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 112 (538)
T 3qan_A 37 EYPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQ--TWRNVNPEERANILVKAAAIIRRR 112 (538)
T ss_dssp EECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHH
Confidence 457899999997 788999999999 999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHh-hhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHH
Q 012658 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW-ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (459)
Q Consensus 144 ~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~-~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (459)
.++|++++++|+|||+.++.. |+..+++.++||+++ .+.+.+...+...+...++.++|+|||++|+|||||+.+.++
T Consensus 113 ~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 191 (538)
T 3qan_A 113 KHEFSAWLVHEAGKPWKEADA-DTAEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVG 191 (538)
T ss_dssp HHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHTCBCCCCCTTEEEEEEEEECCEEEEECCSTTTTHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCeeecccCCcceeeecCCCcEEEEECCCchHHHHHHH
Confidence 999999999999999999865 999999999999998 666677666655567889999999999999999999999999
Q ss_pred HHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHH
Q 012658 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (459)
Q Consensus 223 ~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~ 302 (459)
++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|++.+.+..|.+||+||+|.||||+.+|+.|++.+
T Consensus 192 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~a 271 (538)
T 3qan_A 192 TAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERA 271 (538)
T ss_dssp HHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999998
Q ss_pred HhcC------CCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhcc
Q 012658 303 AKSN------LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 376 (459)
Q Consensus 303 a~~~------~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~v 376 (459)
++ + +||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 272 a~-~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~v 350 (538)
T 3qan_A 272 AV-VRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTV 350 (538)
T ss_dssp TS-CCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCB
T ss_pred hh-ccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccC
Confidence 87 5 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecC
Q 012658 377 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGE 456 (459)
Q Consensus 377 G~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~ 456 (459)
|+|+++++++||+++..+++++.++|++++++| ++++||......|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 351 G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~ 429 (538)
T 3qan_A 351 GDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKAN 429 (538)
T ss_dssp SCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeC
Confidence 999999999999999999999999999999999 9999998754479999999999999999999999999999999999
Q ss_pred CC
Q 012658 457 NF 458 (459)
Q Consensus 457 ~~ 458 (459)
|+
T Consensus 430 ~~ 431 (538)
T 3qan_A 430 DF 431 (538)
T ss_dssp SH
T ss_pred CH
Confidence 85
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-85 Score=687.87 Aligned_cols=389 Identities=33% Similarity=0.573 Sum_probs=369.6
Q ss_pred cCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 012658 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (459)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~ 145 (459)
.++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++||+ .|+.++..+|.++|+++++.|++|.+
T Consensus 7 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 84 (479)
T 2imp_A 7 HPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQP--EWEALPAIERASWLRKISAGIRERAS 84 (479)
T ss_dssp CCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 3689999999876778999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCC-CCceEEEEEccceEEEEEcCCCchHHhhHHHH
Q 012658 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (459)
Q Consensus 146 ~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 224 (459)
+|++++++|+|||+.++. .|+..+++.++||++++++..+...+.. .+...+..++|+|||++|+|||||+...++++
T Consensus 85 ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 163 (479)
T 2imp_A 85 EISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKM 163 (479)
T ss_dssp HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHHH
Confidence 999999999999999876 6999999999999998887766654432 34567899999999999999999999999999
Q ss_pred HHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHh
Q 012658 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304 (459)
Q Consensus 225 ~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~ 304 (459)
++||++||+||+|||+.+|+++..|+++|.++|+|+|+||+|+|++.+.+..|.+|++||+|.||||+.+|+.|++.+++
T Consensus 164 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~ 243 (479)
T 2imp_A 164 APALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAK 243 (479)
T ss_dssp HHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHT
T ss_pred HHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999777889999999999999999999999999999987
Q ss_pred cCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCC-CC
Q 012658 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK-GG 383 (459)
Q Consensus 305 ~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~-~~ 383 (459)
++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++ ++
T Consensus 244 -~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 322 (479)
T 2imp_A 244 -NITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERND 322 (479)
T ss_dssp -TTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCSS
T ss_pred -cCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred CcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 384 ~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++||++++.+++++.++|++++++|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 323 ~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~ 397 (479)
T 2imp_A 323 IAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTL 397 (479)
T ss_dssp CSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSH
T ss_pred CccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCH
Confidence 999999999999999999999999999999999753346899999999999999999999999999999999985
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-85 Score=687.80 Aligned_cols=390 Identities=36% Similarity=0.617 Sum_probs=372.4
Q ss_pred ccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 012658 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (459)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~ 144 (459)
..++||||+|+.+.++++++++||.||+++++++.++.+|++++++.|++||+ .|+.++..+|.++|+++++.|+++.
T Consensus 9 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 86 (481)
T 3jz4_A 9 RQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKERATILRNWFNLMMEHQ 86 (481)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHHHH
Confidence 44789999999887889999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCC-CCceEEEEEccceEEEEEcCCCchHHhhHHH
Q 012658 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (459)
Q Consensus 145 ~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (459)
++|++++++|+|||..++. .|+..+++.++||+.++++..+...+.. .+...+..++|+|||++|+|||||+...+++
T Consensus 87 ~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 165 (481)
T 3jz4_A 87 DDLARLMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRK 165 (481)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHHH
Confidence 9999999999999999876 5999999999999998887766555432 4567889999999999999999999999999
Q ss_pred HHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHH
Q 012658 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (459)
Q Consensus 224 l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a 303 (459)
+++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|++.+.+..|.+||+||+|.||||+.+|+.|++.++
T Consensus 166 ~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa 245 (481)
T 3jz4_A 166 AGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCA 245 (481)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHT
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999988
Q ss_pred hcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCC
Q 012658 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (459)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~ 383 (459)
+ +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++++
T Consensus 246 ~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 324 (481)
T 3jz4_A 246 K-DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNG 324 (481)
T ss_dssp T-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTT
T ss_pred h-cCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCc
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 384 ~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++||++++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 325 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 399 (481)
T 3jz4_A 325 VTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDE 399 (481)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCH
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCH
Confidence 999999999999999999999999999999999765456899999999999999999999999999999999985
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-86 Score=695.99 Aligned_cols=392 Identities=26% Similarity=0.429 Sum_probs=370.0
Q ss_pred CCCccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHH
Q 012658 62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE 141 (459)
Q Consensus 62 ~~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~ 141 (459)
++...++||||+|+.+.++++++++||.||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|+
T Consensus 23 ~m~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 100 (521)
T 4e4g_A 23 MMYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQP--KWAATNPQRRARVFMKFVQLLN 100 (521)
T ss_dssp -CEEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHH
T ss_pred hhhccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHH
Confidence 34556899999999887889999999999999999999999999999999999999 9999999999999999999999
Q ss_pred HcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCC-CCCceEEEEEccceEEEEEcCCCchHHhh
Q 012658 142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220 (459)
Q Consensus 142 ~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~ 220 (459)
+|.++|++++++|+|||+.++. .|+..+++.++||+++.+.+.+...+. ..+...++.++|+|||++|+|||||+.+.
T Consensus 101 ~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 179 (521)
T 4e4g_A 101 DNMNELAEMLSREHGKTIDDAK-GDIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIP 179 (521)
T ss_dssp HHHHHHHHHHHHHHCSCHHHHH-HHHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSCTTHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcchHHHH
Confidence 9999999999999999999976 599999999999999887776654331 23566889999999999999999999999
Q ss_pred HHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHH
Q 012658 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (459)
Q Consensus 221 ~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 300 (459)
++++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+| +.+.+..|+.||+||+|.||||+.+|+.|++
T Consensus 180 ~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~ 258 (521)
T 4e4g_A 180 MWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNG-DKGAVDAILTHPDIAAVSFVGSTPIARYVYG 258 (521)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCC-CHHHHHHHHTCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeC-ChHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 4566799999999999999999999999999
Q ss_pred HHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCc-chHHHHHHHHHHHHhhccCCC
Q 012658 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDP 379 (459)
Q Consensus 301 ~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~-v~d~f~~~l~~~~~~~~vG~p 379 (459)
.+++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++ +||+|+++|+++++++++|+|
T Consensus 259 ~aa~-~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~ 337 (521)
T 4e4g_A 259 TAAM-NGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPY 337 (521)
T ss_dssp HHHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCT
T ss_pred HHhh-cCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCC
Confidence 9987 89999999999999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCccc----CCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEec
Q 012658 380 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL----GAKGYYIKPTVFTGVKVLILISPASISPNILHTFNG 455 (459)
Q Consensus 380 ~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~ 455 (459)
+++++++||+++..+++++.++|++++++||++++||... ..+|+|++|||+.+++++|++++||+||||++|++|
T Consensus 338 ~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~ 417 (521)
T 4e4g_A 338 TDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRA 417 (521)
T ss_dssp TCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCB
T ss_pred CCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEe
Confidence 9999999999999999999999999999999999999652 246999999999999999999999999999999999
Q ss_pred CCC
Q 012658 456 ENF 458 (459)
Q Consensus 456 ~~~ 458 (459)
+|+
T Consensus 418 ~~~ 420 (521)
T 4e4g_A 418 RNY 420 (521)
T ss_dssp SSH
T ss_pred CCH
Confidence 985
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-86 Score=693.63 Aligned_cols=387 Identities=40% Similarity=0.680 Sum_probs=369.5
Q ss_pred CceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 012658 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (459)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~ 146 (459)
++||||+|+.+.++++++++||.||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|++|.++
T Consensus 28 ~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e 105 (515)
T 2d4e_A 28 LHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQ--RWSRTKAKERKRYLLRIAELIEKHADE 105 (515)
T ss_dssp CEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 689999999876788999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCC-CCCceEEEEEccceEEEEEcCCCchHHhhHHHHH
Q 012658 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225 (459)
Q Consensus 147 l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 225 (459)
|++++++|+|||+.++. .|+..+++.++||++++++..+...+. ..+...++.++|+|||++|+|||||+.+.+++++
T Consensus 106 la~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 184 (515)
T 2d4e_A 106 LAVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIA 184 (515)
T ss_dssp HHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhhh
Confidence 99999999999999987 799999999999999998877765554 3355678999999999999999999999999999
Q ss_pred HHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhc
Q 012658 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305 (459)
Q Consensus 226 ~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~ 305 (459)
+||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|++.+.+..|..||+||+|.||||+.+|+.|++.+++
T Consensus 185 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~- 263 (515)
T 2d4e_A 185 PALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAAD- 263 (515)
T ss_dssp HHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGG-
T ss_pred HHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhh-
Confidence 9999999999999999999999999999999999999999999777899999999999999999999999999999987
Q ss_pred CCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCc
Q 012658 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 385 (459)
Q Consensus 306 ~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~ 385 (459)
++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+++++
T Consensus 264 ~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~ 343 (515)
T 2d4e_A 264 HLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETE 343 (515)
T ss_dssp GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCS
T ss_pred cCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccC--------CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCC
Q 012658 386 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--------AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGEN 457 (459)
Q Consensus 386 ~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~--------~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~ 457 (459)
+||+++..+++++.++|++++++|+++++||.... ..|+|++|||+.+ +++|++++||+||||++|++|+|
T Consensus 344 ~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~~ 422 (515)
T 2d4e_A 344 VGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKD 422 (515)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEESS
T ss_pred cCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeCC
Confidence 99999999999999999999999999999997643 2699999999999 99999999999999999999998
Q ss_pred C
Q 012658 458 F 458 (459)
Q Consensus 458 ~ 458 (459)
+
T Consensus 423 ~ 423 (515)
T 2d4e_A 423 E 423 (515)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-85 Score=689.50 Aligned_cols=388 Identities=36% Similarity=0.605 Sum_probs=367.4
Q ss_pred ccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 012658 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (459)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~ 144 (459)
..++||||+|+.+.+ ++++++||.||+++++++.++.+|++++++.|++||+ .|+.++..+|.++|+++++.|+++.
T Consensus 23 ~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 99 (495)
T 1wnd_A 23 QHKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA--EWGQTTPKVRAECLLKLADVIEENG 99 (495)
T ss_dssp CCCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHH
Confidence 357899999997655 8899999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCC-CCceEEEEEccceEEEEEcCCCchHHhhHHH
Q 012658 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (459)
Q Consensus 145 ~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (459)
++|++++++|+|||+.++...|+..+++.++||+++++++.+...+.. .+...++.++|+|||++|+|||||+...+++
T Consensus 100 ~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 179 (495)
T 1wnd_A 100 QVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWK 179 (495)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcchHHHHHHH
Confidence 999999999999999987655999999999999999888766554432 2446788999999999999999999999999
Q ss_pred HHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHH
Q 012658 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (459)
Q Consensus 224 l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a 303 (459)
+++||++||+||+|||+.+|+++..|++++.++ +|+|+||+|+|.+.+.+..|++||+||+|.||||+.+|+.|++.++
T Consensus 180 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa 258 (495)
T 1wnd_A 180 LAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTA 258 (495)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHG
T ss_pred HHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHH
Confidence 999999999999999999999999999999999 9999999999987888999999999999999999999999999998
Q ss_pred hcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCC
Q 012658 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (459)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~ 383 (459)
+ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++++
T Consensus 259 ~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 337 (495)
T 1wnd_A 259 S-SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDES 337 (495)
T ss_dssp G-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTT
T ss_pred h-cCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCC
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHhCC-CeEEeCCc-ccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 384 IQQGPQIDSEQFEKILKYIRSGVDGG-AKLETGGE-RLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 384 ~~~Gpl~~~~~~~~i~~~i~~a~~~G-a~v~~gg~-~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++||++++.+++++.++|++++++| +++++||. .. ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 338 ~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 413 (495)
T 1wnd_A 338 TELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-GNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNE 413 (495)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-SSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred CCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-CCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCH
Confidence 99999999999999999999999999 99999997 43 26899999999999999999999999999999999985
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-85 Score=688.98 Aligned_cols=384 Identities=32% Similarity=0.481 Sum_probs=365.9
Q ss_pred ccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 012658 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (459)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~ 144 (459)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|++.|++||. .|+.++..+|.++|+++++.|++|.
T Consensus 11 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 88 (505)
T 3prl_A 11 NANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQK--IWKIRPIHERVDLLYAWADLLEERK 88 (505)
T ss_dssp ECCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 44789999999887789999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCC--C----CceEEEEEccceEEEEEcCCCchHH
Q 012658 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD--G----PYHVQTLHEPIGVAGQIIPWNFPLL 218 (459)
Q Consensus 145 ~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~--~----~~~~~~~~~P~GVv~~i~p~n~P~~ 218 (459)
++|++++++|+|||+.++.. |+..+++.++||+++++++.+...+.. . +...++.++|+|||++|+|||||+.
T Consensus 89 ~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~ 167 (505)
T 3prl_A 89 EIIGELIMHEVAKPKKSAIG-EVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVN 167 (505)
T ss_dssp HHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTH
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHHH
Confidence 99999999999999999864 999999999999999888766544322 1 4567889999999999999999999
Q ss_pred hhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHH
Q 012658 219 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 298 (459)
Q Consensus 219 ~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 298 (459)
+.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.+.++.|..||+||+|.||||+.+|+.|
T Consensus 168 ~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i 247 (505)
T 3prl_A 168 LAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERI 247 (505)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888899999999999999999999999999
Q ss_pred HHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCC
Q 012658 299 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 378 (459)
Q Consensus 299 ~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~ 378 (459)
++.++ +||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 248 ~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 324 (505)
T 3prl_A 248 SEKAK---MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGS 324 (505)
T ss_dssp HHHCC---SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSC
T ss_pred HHHcc---CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCC
Confidence 98875 799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 379 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 379 p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
|+ +++++||+++..+++++.++|++++++||++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 325 p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~---~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~ 400 (505)
T 3prl_A 325 PE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR---QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDA 400 (505)
T ss_dssp TT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSH
T ss_pred CC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCH
Confidence 99 9999999999999999999999999999999999974 5899999999999999999999999999999999985
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-84 Score=681.40 Aligned_cols=385 Identities=35% Similarity=0.568 Sum_probs=366.6
Q ss_pred CceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 012658 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (459)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~ 146 (459)
++||||+|+.+. ++++++||.||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|++|.++
T Consensus 14 ~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e 89 (487)
T 2w8n_A 14 DSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFC--RWREVSAKERSSLLRKWYNLMIQNKDD 89 (487)
T ss_dssp SEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 689999999753 7899999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCC-CCCceEEEEEccceEEEEEcCCCchHHhhHHHHH
Q 012658 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225 (459)
Q Consensus 147 l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 225 (459)
|++++++|+|||+.++. .|+..+++.++||+++++++.+...+. ..+...+..++|+|||++|+|||||+...+++++
T Consensus 90 la~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 168 (487)
T 2w8n_A 90 LARIITAESGKPLKEAH-GEILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVG 168 (487)
T ss_dssp HHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHHH
Confidence 99999999999999886 499999999999999988877665443 2356778999999999999999999999999999
Q ss_pred HHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeec---CCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHH
Q 012658 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVS---GYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (459)
Q Consensus 226 ~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~---g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~ 302 (459)
+||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+ |.+.+.+..|.+|++||+|.||||+.+|+.|++.+
T Consensus 169 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~a 248 (487)
T 2w8n_A 169 AALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHA 248 (487)
T ss_dssp HHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHHH
T ss_pred HHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999 86778899999999999999999999999999999
Q ss_pred HhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHh-hccCCCCC
Q 012658 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK-RVVGDPFK 381 (459)
Q Consensus 303 a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~-~~vG~p~~ 381 (459)
++ +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|++
T Consensus 249 a~-~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~~ 327 (487)
T 2w8n_A 249 AN-SVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFE 327 (487)
T ss_dssp HT-TTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTTS
T ss_pred hc-cCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCccc
Confidence 87 89999999999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred CCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCc-eEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY-YIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 382 ~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~-~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++++||++++.+++++.++|++++++|+++++||... .+|+ |++|||+.+++++|++++||+||||++|++|+|+
T Consensus 328 ~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 404 (487)
T 2w8n_A 328 EGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-QLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTE 404 (487)
T ss_dssp TTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-TTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCH
T ss_pred ccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-CCCCceECCEEEecCCCcchhhhcccccceEEEEEeCCH
Confidence 99999999999999999999999999999999999764 3689 9999999999999999999999999999999985
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-84 Score=680.47 Aligned_cols=388 Identities=29% Similarity=0.466 Sum_probs=367.6
Q ss_pred CccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHc
Q 012658 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (459)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~ 143 (459)
...++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++||+ .|+.++..+|.++|+++++.|++|
T Consensus 5 ~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 82 (485)
T 4dng_A 5 TLNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQK--EWAKSTTEDRKAVLQKARGYLHEN 82 (485)
T ss_dssp GCCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHH
Confidence 345789999999887889999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCC--CCceEEEEEccceEEEEEcCCCchHHhhH
Q 012658 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD--GPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221 (459)
Q Consensus 144 ~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 221 (459)
.++|++++++|+|||+.++.. |+..+++.++|++.+.+.+.+...+.. .+...++.++|+|||++|+|||||+...+
T Consensus 83 ~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 161 (485)
T 4dng_A 83 RDDIIMMIARETGGTIIKSTI-ELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSM 161 (485)
T ss_dssp HHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHHH
Confidence 999999999999999999875 999999999999999988777665532 35678999999999999999999999999
Q ss_pred HHHHHHHhcCCeEEeecCCCchHHH-HHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHH
Q 012658 222 WKVGPALACGNTIVLKTAEQTPLSA-LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (459)
Q Consensus 222 ~~l~~ALaaGN~VVlKps~~~p~~~-~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 300 (459)
+++++||++||+||+|||+.+|+++ ..|+++|.++|+|+|+||+|+|++.+.+..|++||+||+|.||||+.+|+.|++
T Consensus 162 ~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~ 241 (485)
T 4dng_A 162 RSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGE 241 (485)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHH
Confidence 9999999999999999999999999 999999999999999999999987779999999999999999999999999999
Q ss_pred HHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCC
Q 012658 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380 (459)
Q Consensus 301 ~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~ 380 (459)
.+++ +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.
T Consensus 242 ~aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~ 320 (485)
T 4dng_A 242 IAGR-AFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQT 320 (485)
T ss_dssp HHHH-HTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTT
T ss_pred HHhh-hccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCC
Confidence 9987 789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 381 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 381 ~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++++++||+++..+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 321 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~ 395 (485)
T 4dng_A 321 DPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR---VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSD 395 (485)
T ss_dssp STTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSH
T ss_pred cCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCH
Confidence 99999999999999999999999999999999999975 5899999999999999999999999999999999985
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-84 Score=680.60 Aligned_cols=387 Identities=27% Similarity=0.454 Sum_probs=365.2
Q ss_pred ccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 012658 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (459)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~ 144 (459)
.+++||||+|+. ++++++++||.||+++++++.++.+|++++++.|++||+ .|+.++..+|.++|+++++.|++|.
T Consensus 23 ~~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 98 (500)
T 2j6l_A 23 ENEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWK--IWADIPAPKRGEIVRQIGDALREKI 98 (500)
T ss_dssp EEECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 458899999994 678999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCC-CCceEEEEEccceEEEEEcCCCchHHhhHHH
Q 012658 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (459)
Q Consensus 145 ~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (459)
++|++++++|+|||+.++ ..|+..+++.++|++++++++.+...+.. .+...+..++|+|||++|+|||||+.+.+++
T Consensus 99 ~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 177 (500)
T 2j6l_A 99 QVLGSLVSLEMGKILVEG-VGEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWN 177 (500)
T ss_dssp HHHHHHHHHHTCCCHHHH-HHHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEECCCcchhhHHHHH
Confidence 999999999999999987 46999999999999998887766654432 2445678899999999999999999999999
Q ss_pred HHHHHhcCCeEEeecCCCchHHHHHHHHHHH----HcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHH
Q 012658 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299 (459)
Q Consensus 224 l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~----~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 299 (459)
+++||++||+||+|||+.+|+++..|++++. ++|+|+|++|+|+| +.+.+..|..|++||+|.||||+.+|+.|+
T Consensus 178 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~I~FTGS~~~g~~i~ 256 (500)
T 2j6l_A 178 NAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQVG 256 (500)
T ss_dssp HHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHCTTCSEEEEESCHHHHHHHH
T ss_pred HHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 9999999999999999999999999988866 46999999999999 788999999999999999999999999999
Q ss_pred HHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCC
Q 012658 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379 (459)
Q Consensus 300 ~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p 379 (459)
+.+++ +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|+|
T Consensus 257 ~~aa~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 335 (500)
T 2j6l_A 257 LMVQE-RFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNP 335 (500)
T ss_dssp HHHHH-TTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCT
T ss_pred HHhcc-CCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCCc
Confidence 99987 89999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 380 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 380 ~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
.++++++||++++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 336 ~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 414 (500)
T 2j6l_A 336 WDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNE 414 (500)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCH
T ss_pred ccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCH
Confidence 9999999999999999999999999999999999999764456999999999999999999999999999999999985
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-84 Score=681.18 Aligned_cols=391 Identities=32% Similarity=0.529 Sum_probs=371.5
Q ss_pred CCCCccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHH
Q 012658 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLL 140 (459)
Q Consensus 61 ~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l 140 (459)
..+...++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++||+ .|+.++..+|.++|+++++.|
T Consensus 8 ~~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l 85 (508)
T 3r64_A 8 AGIDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQA--EWAATPAAERSAIIYRAAELL 85 (508)
T ss_dssp TTBCTTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHH
T ss_pred CCccccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHH
Confidence 556667899999999887889999999999999999999999999999999999999 999999999999999999999
Q ss_pred HHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCC--CCceEEEEEccceEEEEEcCCCchHH
Q 012658 141 ERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD--GPYHVQTLHEPIGVAGQIIPWNFPLL 218 (459)
Q Consensus 141 ~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~i~p~n~P~~ 218 (459)
++|.++|++++++|+|||..++.. |+..+++.++|++.++++..+ ..+.. .+...++.++|+|||++|+|||||+.
T Consensus 86 ~~~~~ela~~~~~e~Gk~~~~a~~-Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~ 163 (508)
T 3r64_A 86 EEHREEIVEWLIKESGSTRSKANL-EITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLN 163 (508)
T ss_dssp HHTHHHHHHHHHHTSCCCHHHHHH-HHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHH
T ss_pred HHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHH
Confidence 999999999999999999999865 999999999999998887665 44422 35678899999999999999999999
Q ss_pred hhHHHHHHHHhcCCeEEeecCCCchHHH-HHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHH
Q 012658 219 MFAWKVGPALACGNTIVLKTAEQTPLSA-LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 297 (459)
Q Consensus 219 ~~~~~l~~ALaaGN~VVlKps~~~p~~~-~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~ 297 (459)
..++++++||++||+||+|||+.+|+++ ..|++++.++|+|+|++|+|+|++.+.++.|++||+||+|.||||+.+|+.
T Consensus 164 ~~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~ 243 (508)
T 3r64_A 164 LSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRR 243 (508)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHH
T ss_pred HHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHH
Confidence 9999999999999999999999999999 999999999999999999999987889999999999999999999999999
Q ss_pred HHHHHHhc-CCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhcc
Q 012658 298 VLQLAAKS-NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 376 (459)
Q Consensus 298 i~~~~a~~-~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~v 376 (459)
|++.+++. +++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 244 i~~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 323 (508)
T 3r64_A 244 VGELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPT 323 (508)
T ss_dssp HHHHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCB
T ss_pred HHHHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccC
Confidence 99988742 58999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecC
Q 012658 377 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGE 456 (459)
Q Consensus 377 G~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~ 456 (459)
|+|.++++++||++++.+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 324 G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 400 (508)
T 3r64_A 324 GDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKAD 400 (508)
T ss_dssp SCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE---ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEES
T ss_pred CCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC---CCcEEecEEEecCCCCChhhcccccCceEEEEEeC
Confidence 999999999999999999999999999999999999999975 58999999999999999999999999999999999
Q ss_pred CC
Q 012658 457 NF 458 (459)
Q Consensus 457 ~~ 458 (459)
|+
T Consensus 401 ~~ 402 (508)
T 3r64_A 401 DE 402 (508)
T ss_dssp SH
T ss_pred CH
Confidence 85
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-84 Score=676.64 Aligned_cols=376 Identities=28% Similarity=0.495 Sum_probs=354.0
Q ss_pred ceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHH
Q 012658 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI 147 (459)
Q Consensus 68 ~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l 147 (459)
+||||+|+.+ ++ ++++||+||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|++|.++|
T Consensus 2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el 76 (486)
T 3pqa_A 2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKE--VMKNLPITKRYNILMNIAKQIKEKKEEL 76 (486)
T ss_dssp -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHH--HHHTCCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999974 56 99999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHH
Q 012658 148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 227 (459)
Q Consensus 148 ~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 227 (459)
++++++|+|||..++. .|+..+++.++||+.+++++.+...+.+ +...++.++|+|||++|+|||||+.+.++++++|
T Consensus 77 a~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 154 (486)
T 3pqa_A 77 AKILAIDAGKPIKQAR-VEVERSIGTFKLAAFYVKEHRDEVIPSD-DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPA 154 (486)
T ss_dssp HHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCCEEEECCT-TEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCceecCC-CceeEEEEccccEEEEECCCchHHHHHHHHHHHH
Confidence 9999999999999976 5999999999999999988776665544 6678899999999999999999999999999999
Q ss_pred HhcCCeEEeecCCCchHHHHHHHHHHHHc----CCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHH
Q 012658 228 LACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (459)
Q Consensus 228 LaaGN~VVlKps~~~p~~~~~l~~ll~~a----GlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a 303 (459)
|++||+||+|||+.+|+++..|++++.++ |+|+|++|+|+|++.+.+..|..||+||+|.||||+.+|+.|++.++
T Consensus 155 LaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa 234 (486)
T 3pqa_A 155 IATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG 234 (486)
T ss_dssp HHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC
T ss_pred HHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC
Confidence 99999999999999999999999999999 99999999999988888999999999999999999999999998875
Q ss_pred hcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCC
Q 012658 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (459)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~ 383 (459)
+||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++++
T Consensus 235 ---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 311 (486)
T 3pqa_A 235 ---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEK 311 (486)
T ss_dssp ---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred ---CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCC
Q 012658 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGEN 457 (459)
Q Consensus 384 ~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~ 457 (459)
+++||+++..+++++.++|++++++|+++++||.. .|+|++|||+ +++++|++++||+||||++|++|+|
T Consensus 312 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~ 381 (486)
T 3pqa_A 312 TDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE 381 (486)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH
Confidence 99999999999999999999999999999999965 5899999999 9999999999999999999999986
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-84 Score=680.84 Aligned_cols=386 Identities=32% Similarity=0.516 Sum_probs=364.2
Q ss_pred cCceecCEeeeCCCCCeeeeeCCC-CCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 012658 66 TQLLINGQFVDSASGKTFPTLDPR-TGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (459)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~-tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~ 144 (459)
.++||||+|+. ++++++++||+ ||+++++++.++.+|++++++.|++||+ .|+.++..+|.++|+++++.|++|.
T Consensus 38 ~~~~i~G~~~~--~~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 113 (516)
T 1uzb_A 38 YPLYIGGEWVD--TKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWKDWPQEDRSRLLLKAAALMRRRK 113 (516)
T ss_dssp ECEEETTEEEC--CSSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred cceeECCEEec--CCCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 47899999996 46789999999 6999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccC--CCCCceEEEEEccceEEEEEcCCCchHHhhHH
Q 012658 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP--ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (459)
Q Consensus 145 ~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (459)
++|++++++|+|||+.++. .|+..+++.++||+++++++.+...+ ...+...++.++|+|||++|+|||||+.+.++
T Consensus 114 ~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 192 (516)
T 1uzb_A 114 RELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTG 192 (516)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHHH
Confidence 9999999999999999986 69999999999999999888765432 22345678899999999999999999999999
Q ss_pred HHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHH
Q 012658 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (459)
Q Consensus 223 ~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~ 302 (459)
++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|.+.+.+..|++||+||+|.||||+.+|+.|++.+
T Consensus 193 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~a 272 (516)
T 1uzb_A 193 MIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAA 272 (516)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999998
Q ss_pred Hh-----cCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccC
Q 012658 303 AK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 377 (459)
Q Consensus 303 a~-----~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG 377 (459)
++ +++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 273 a~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 352 (516)
T 1uzb_A 273 GRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVG 352 (516)
T ss_dssp TSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBS
T ss_pred hhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCC
Confidence 71 3799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCC
Q 012658 378 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGEN 457 (459)
Q Consensus 378 ~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~ 457 (459)
+| ++++++||++++.+++++.++|++++++| ++++||......|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 353 ~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 430 (516)
T 1uzb_A 353 PA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKD 430 (516)
T ss_dssp CG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESS
T ss_pred CC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeCC
Confidence 99 99999999999999999999999999999 89999975334699999999999999999999999999999999998
Q ss_pred C
Q 012658 458 F 458 (459)
Q Consensus 458 ~ 458 (459)
+
T Consensus 431 ~ 431 (516)
T 1uzb_A 431 F 431 (516)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-84 Score=674.08 Aligned_cols=372 Identities=26% Similarity=0.415 Sum_probs=358.1
Q ss_pred eeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhh
Q 012658 82 TFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQ 161 (459)
Q Consensus 82 ~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~ 161 (459)
+++++||+||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|+++.++|++++++|+|||+.+
T Consensus 5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 82 (484)
T 3ros_A 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYK--KWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSE 82 (484)
T ss_dssp CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH
Confidence 589999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred hhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCC
Q 012658 162 SAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241 (459)
Q Consensus 162 a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~ 241 (459)
+. .|+..+++.++|++++++++.+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 83 a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~ 161 (484)
T 3ros_A 83 SK-EEVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHN 161 (484)
T ss_dssp HH-HHHHHHHHHHHHHHHHHHHHTSCEEECCTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTT
T ss_pred HH-HHHHHHHHHHHHHHHHHHHhcCCeeccCCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence 87 69999999999999999888776555445678899999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEE
Q 012658 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321 (459)
Q Consensus 242 ~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~i 321 (459)
+|+++..|++++.++|+|+|++|+|+|++.+.+. |..||+||+|.||||+.+|+.|++.+++ ++||+++|||||||+|
T Consensus 162 tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~-~lk~v~lELGGk~p~i 239 (484)
T 3ros_A 162 VPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGK-NLKKSTMELGGNDAFI 239 (484)
T ss_dssp CHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHH-TTCEEEEECCCCCEEE
T ss_pred ChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhc-cCCceEeecCCCCcce
Confidence 9999999999999999999999999998777888 9999999999999999999999999987 8999999999999999
Q ss_pred EccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHH
Q 012658 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 401 (459)
Q Consensus 322 V~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~ 401 (459)
|++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++++++||+++..+++++.++
T Consensus 240 V~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~ 319 (484)
T 3ros_A 240 VLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQ 319 (484)
T ss_dssp ECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHH
T ss_pred eCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 402 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 402 i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
|++++++|+++++||...+.+|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 320 i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 376 (484)
T 3ros_A 320 VKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDD 376 (484)
T ss_dssp HHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSH
T ss_pred HHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCH
Confidence 999999999999999765567999999999999999999999999999999999985
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-84 Score=676.03 Aligned_cols=388 Identities=30% Similarity=0.490 Sum_probs=366.0
Q ss_pred ccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 012658 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (459)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~ 144 (459)
..++||||+|+.+.++++++++||.||+++++++.++.+|++++++.|++||+ .|+.++..+|.++|+++++.|++|.
T Consensus 5 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 82 (486)
T 1t90_A 5 KLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFK--TWSKVAVPRRARILFNFQQLLSQHK 82 (486)
T ss_dssp BCCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHTTH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHH
Confidence 35789999999876788999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccC-CCCCceEEEEEccceEEEEEcCCCchHHhhHHH
Q 012658 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (459)
Q Consensus 145 ~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (459)
++|++++++|+|||+.++. .|+..+++.++|++.+.+.+.+...+ ...+...+..++|+|||++|+|||||+...+++
T Consensus 83 ~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 161 (486)
T 1t90_A 83 EELAHLITIENGKNTKEAL-GEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWM 161 (486)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHHH
Confidence 9999999999999998875 69999999999999877776655433 123456788999999999999999999999999
Q ss_pred HHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHH
Q 012658 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (459)
Q Consensus 224 l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a 303 (459)
+++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+| +.+.+..|++|++||+|.||||+.+|+.|++.++
T Consensus 162 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa 240 (486)
T 1t90_A 162 FPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGS 240 (486)
T ss_dssp HHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999 5678999999999999999999999999999988
Q ss_pred hcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCce-eEeeCcchHHHHHHHHHHHHhhccCCCCCC
Q 012658 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR-TFVHESVYDQFVEKANALAMKRVVGDPFKG 382 (459)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~-v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~ 382 (459)
+ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++| +|||++ ||+|+++|+++++++++|+|+++
T Consensus 241 ~-~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~ 318 (486)
T 1t90_A 241 E-NLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDD 318 (486)
T ss_dssp H-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTST
T ss_pred c-cCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCcc
Confidence 7 89999999999999999999999999999999999999999999999 999999 99999999999999999999999
Q ss_pred CCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccC-CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 383 ~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++++||+++..+++++.++|++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 319 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~ 395 (486)
T 1t90_A 319 GVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNL 395 (486)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSH
T ss_pred CCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCH
Confidence 99999999999999999999999999999999996432 36899999999999999999999999999999999985
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-84 Score=677.50 Aligned_cols=388 Identities=34% Similarity=0.570 Sum_probs=367.4
Q ss_pred CccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHc
Q 012658 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (459)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~ 143 (459)
...++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++||+ .|+.++..+|.++|+++++.|++|
T Consensus 6 ~~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 83 (478)
T 3ty7_A 6 DYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYL--EFRHTSVKERQALLDKIVKEYENR 83 (478)
T ss_dssp ECCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHT
T ss_pred hhhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHh
Confidence 356899999999988889999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHH
Q 012658 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (459)
Q Consensus 144 ~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (459)
.++|++++++|+|||+.++...|+..+++.++|+++++++..+... +...+..++|+|||++|+|||||+...+++
T Consensus 84 ~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 159 (478)
T 3ty7_A 84 KDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER----RGDDLVVKEAIGVSGLITPWNFPTNQTSLK 159 (478)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE----ETTEEEEEEECCCEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC----CccceEEecCceEEEEECCCcchHHHHHHH
Confidence 9999999999999999998667999999999999999887665432 235788999999999999999999999999
Q ss_pred HHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHH
Q 012658 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (459)
Q Consensus 224 l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a 303 (459)
+++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|++.+.+..|..||+||.|.||||+.+|+.|++.++
T Consensus 160 ~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa 239 (478)
T 3ty7_A 160 LAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAA 239 (478)
T ss_dssp HHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTT
T ss_pred HHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999888
Q ss_pred hcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCC
Q 012658 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (459)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~ 383 (459)
+ +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|++++
T Consensus 240 ~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 318 (478)
T 3ty7_A 240 K-DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDG 318 (478)
T ss_dssp T-TTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred h-cCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 7 889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCccc-C--CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL-G--AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 384 ~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~-~--~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++||+++..+++++.++|++++++|+++++||... . ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 319 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~ 396 (478)
T 3ty7_A 319 TQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDL 396 (478)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSH
T ss_pred CccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCH
Confidence 999999999999999999999999999999999432 1 46999999999999999999999999999999999985
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-84 Score=673.26 Aligned_cols=382 Identities=29% Similarity=0.438 Sum_probs=361.0
Q ss_pred ccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 012658 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (459)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~ 144 (459)
.+++||||+|+.+.+ +++++||+||+++++++.++.+|++++++.|++||+ .|+.++..+|.++|+++++.|++|.
T Consensus 4 ~~~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 79 (475)
T 1euh_A 4 QYKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQP--AWRALSYIERAAYLHKVADILMRDK 79 (475)
T ss_dssp BCCEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHhH
Confidence 347899999997533 899999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCC-CC----ceE-EEEEccceEEEEEcCCCchHH
Q 012658 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GP----YHV-QTLHEPIGVAGQIIPWNFPLL 218 (459)
Q Consensus 145 ~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~----~~~-~~~~~P~GVv~~i~p~n~P~~ 218 (459)
++|++++++|+|||+.++. .|+..+++.++|++++++++.+...+.. .+ ... +..++|+|||++|+|||||+.
T Consensus 80 ~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~ 158 (475)
T 1euh_A 80 EKIGAILSKEVAKGYKSAV-SEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVN 158 (475)
T ss_dssp HHHHHHHHHHHTCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchHH
Confidence 9999999999999999875 6999999999999999887665543322 23 356 899999999999999999999
Q ss_pred hhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHH
Q 012658 219 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 298 (459)
Q Consensus 219 ~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 298 (459)
..++++++||++||+||+|||+.+|+++..|+++|.++|+|+|+||+|+|.+.+.+..|..|++||+|.||||+.+|+.|
T Consensus 159 ~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i 238 (475)
T 1euh_A 159 LAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERI 238 (475)
T ss_dssp HHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999777789999999999999999999999999
Q ss_pred HHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCC
Q 012658 299 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 378 (459)
Q Consensus 299 ~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~ 378 (459)
++.++ ++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 239 ~~~aa---~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~ 315 (475)
T 1euh_A 239 GKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGN 315 (475)
T ss_dssp HHHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSC
T ss_pred HHhcC---CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCC
Confidence 98875 799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 379 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 379 p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
|.+ ++++||+++..+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 316 p~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~---~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~ 391 (475)
T 1euh_A 316 PED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSV 391 (475)
T ss_dssp GGG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCH
T ss_pred ccc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCH
Confidence 999 999999999999999999999999999999999975 4899999999999999999999999999999999985
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-83 Score=669.43 Aligned_cols=385 Identities=29% Similarity=0.390 Sum_probs=365.0
Q ss_pred CceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 012658 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (459)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~ 146 (459)
++||||+|+.+ ++.+++++||.||+++++++.++.+|++++++.|++||+ .|+.++..+|.++|+++++.|++|.++
T Consensus 7 ~~~I~G~~~~~-~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e 83 (490)
T 3ju8_A 7 THYIAGQWLAG-QGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFP--AWARRPLEQRIELLERFAATLKSRADE 83 (490)
T ss_dssp CEEETTEEECC-CSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CceECCEEecC-CCCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999976 457899999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHH
Q 012658 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 226 (459)
Q Consensus 147 l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 226 (459)
|++++++|+|||+.++. .|+..+++.++|++.+.+...+...+...+...+..++|+|||++|+|||||+...++++++
T Consensus 84 la~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 162 (490)
T 3ju8_A 84 LARVIGEETGKPLWESA-TEVTSMVNKVAISVQAFRERTGEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVP 162 (490)
T ss_dssp HHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHSCCEEEEETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccCCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHH
Confidence 99999999999999986 69999999999999988887766543223445677799999999999999999999999999
Q ss_pred HHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcC
Q 012658 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306 (459)
Q Consensus 227 ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~ 306 (459)
||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+| +.+.+..|..||+||+|.||||+.+|+.|++.+++ +
T Consensus 163 ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~-~ 240 (490)
T 3ju8_A 163 ALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGG-Q 240 (490)
T ss_dssp HHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTT-C
T ss_pred HHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhc-c
Confidence 999999999999999999999999999999999999999999 67899999999999999999999999999999887 8
Q ss_pred CCce-EEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcc-hHHHHHHHHHHHHhhccCC-CCCCC
Q 012658 307 LKPV-TLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV-YDQFVEKANALAMKRVVGD-PFKGG 383 (459)
Q Consensus 307 ~~pv-~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v-~d~f~~~l~~~~~~~~vG~-p~~~~ 383 (459)
++|+ ++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++ ||+|+++|+++++++++|+ |.+++
T Consensus 241 ~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~ 320 (490)
T 3ju8_A 241 PQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPA 320 (490)
T ss_dssp TTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSC
T ss_pred CCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCc
Confidence 8998 8999999999999999999999999999999999999999999999996 9999999999999999999 99999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 384 ~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++||+++..+++++.++|++++++||++++||.....+|+|++|||+. ++++|++++||+||||++|++|+|+
T Consensus 321 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~ 394 (490)
T 3ju8_A 321 PFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDF 394 (490)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSH
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCCH
Confidence 9999999999999999999999999999999997655679999999998 9999999999999999999999985
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-83 Score=675.72 Aligned_cols=383 Identities=26% Similarity=0.387 Sum_probs=362.7
Q ss_pred ccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 012658 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (459)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~ 144 (459)
..++||||+|+.+ + ++++++||+||+++++++.++.+|++++++.|++||+. .|+.++..+|.++|+++++.|++|.
T Consensus 18 ~~~~~i~g~~~~~-~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~-~w~~~~~~~R~~~L~~~a~~l~~~~ 94 (501)
T 1uxt_A 18 VYPSYLAGEWGGS-G-QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRW-SARDMPGTERLAVLRKAADIIERNL 94 (501)
T ss_dssp EECEECSSSEECC-S-CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHH-HHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecC-C-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhh-hhccCCHHHHHHHHHHHHHHHHHhH
Confidence 4578999999975 3 78999999999999999999999999999999999862 4999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCC---CC--CceEEEEEccceEEEEEcCCCchHHh
Q 012658 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA---DG--PYHVQTLHEPIGVAGQIIPWNFPLLM 219 (459)
Q Consensus 145 ~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~---~~--~~~~~~~~~P~GVv~~i~p~n~P~~~ 219 (459)
++|++++++|+|||+.++. .|+..+++.++||+.+++++.+...+. .. +...+..++|+|||++|+|||||+.+
T Consensus 95 ~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 173 (501)
T 1uxt_A 95 DVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFD 173 (501)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccHHHH
Confidence 9999999999999999987 699999999999999998876665443 22 33678999999999999999999999
Q ss_pred hHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHH
Q 012658 220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299 (459)
Q Consensus 220 ~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 299 (459)
.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++ +.+..|..|++||+|.||||+.+|+.|+
T Consensus 174 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~FTGS~~~G~~i~ 252 (501)
T 1uxt_A 174 AVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGERVV 252 (501)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEEEeCcHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999976 8899999999999999999999999999
Q ss_pred HHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCC
Q 012658 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379 (459)
Q Consensus 300 ~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p 379 (459)
+.++ +||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 253 ~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 329 (501)
T 1uxt_A 253 KVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDP 329 (501)
T ss_dssp HHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCT
T ss_pred HhcC---CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCc
Confidence 9876 7999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCC-ceEecEEEeeCC---CCCCCcCcCCCcceEEEEec
Q 012658 380 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG-YYIKPTVFTGVK---VLILISPASISPNILHTFNG 455 (459)
Q Consensus 380 ~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g-~~~~PTvl~~v~---~~~~i~~~EifgPvl~v~~~ 455 (459)
+++++++||++++.+++++.++|++++++||++++||.. .| +|++|||+.+++ ++|++++||+||||++|++|
T Consensus 330 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~---~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~ 406 (501)
T 1uxt_A 330 RDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR---LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEV 406 (501)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB---CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEE
T ss_pred cccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEee
Confidence 999999999999999999999999999999999999975 58 999999999999 99999999999999999999
Q ss_pred CCC
Q 012658 456 ENF 458 (459)
Q Consensus 456 ~~~ 458 (459)
+|+
T Consensus 407 ~~~ 409 (501)
T 1uxt_A 407 KDL 409 (501)
T ss_dssp SSH
T ss_pred CCH
Confidence 985
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-83 Score=674.87 Aligned_cols=388 Identities=25% Similarity=0.345 Sum_probs=363.1
Q ss_pred CccCceecCEeeeCCCCCeeeeeCCCC-CCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHH
Q 012658 64 DYTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (459)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~ 142 (459)
...++||||+|+.+ +.++.++||.| |+++++++.++.+|+++|++.|++||+ .|+.++..+|.++|++++++|++
T Consensus 62 ~~~~~~I~G~~~~~--~~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~~ 137 (563)
T 4e3x_A 62 EAIPCVVGDEEVWT--SDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARK--EWDLKPMADRAQVFLKAADMLSG 137 (563)
T ss_dssp EECCEEETTEEECC--SCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHT
T ss_pred ccCCeEECCEEeec--CCceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHh
Confidence 45689999999974 34778999998 899999999999999999999999999 99999999999999999999999
Q ss_pred c-HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccC-CCCCceEEEEEccceEEEEEcCCCchHHhh
Q 012658 143 H-NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220 (459)
Q Consensus 143 ~-~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~ 220 (459)
+ +++|++++++|+|||+.++...++..+++.++|++.+++++.+.... .+.+...+.++.|+|||++|+|||||+...
T Consensus 138 ~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~~ 217 (563)
T 4e3x_A 138 PRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGG 217 (563)
T ss_dssp TTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHHH
T ss_pred ccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHHH
Confidence 8 99999999999999999987645999999999999999888764432 222344566777889999999999999999
Q ss_pred HHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHH
Q 012658 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (459)
Q Consensus 221 ~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 300 (459)
.+++++|| +||+||+|||+.+|+++..|+++|.++|+|+|+||+|+|++.++++.|..||+|++|.||||+.+|+.|++
T Consensus 218 ~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~ 296 (563)
T 4e3x_A 218 NLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWR 296 (563)
T ss_dssp HHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence 99999999 59999999999999999999999999999999999999988889999999999999999999999999999
Q ss_pred HHHhcCCC------ceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhh
Q 012658 301 LAAKSNLK------PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 374 (459)
Q Consensus 301 ~~a~~~~~------pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~ 374 (459)
.+++ +++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++
T Consensus 297 ~aa~-~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l 375 (563)
T 4e3x_A 297 QVAQ-NLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRI 375 (563)
T ss_dssp HHHH-TTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTC
T ss_pred HHHh-hCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhc
Confidence 9987 677 499999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCC-CCCCCcccccCCHHHHHHHHHHHHHHHh-CCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEE
Q 012658 375 VVGDP-FKGGIQQGPQIDSEQFEKILKYIRSGVD-GGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHT 452 (459)
Q Consensus 375 ~vG~p-~~~~~~~Gpl~~~~~~~~i~~~i~~a~~-~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v 452 (459)
++|+| +|+++++||++++.+++++.++|+++++ +|+++++||.....+|+|++|||+.+++++|++++||+||||++|
T Consensus 376 ~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V 455 (563)
T 4e3x_A 376 KVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTV 455 (563)
T ss_dssp CBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEEE
T ss_pred cCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEEE
Confidence 99999 9999999999999999999999999996 899999999876668999999999999999999999999999999
Q ss_pred EecCC
Q 012658 453 FNGEN 457 (459)
Q Consensus 453 ~~~~~ 457 (459)
++|+|
T Consensus 456 ~~~~d 460 (563)
T 4e3x_A 456 YVYPD 460 (563)
T ss_dssp EEECG
T ss_pred EEECC
Confidence 99985
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-81 Score=650.49 Aligned_cols=375 Identities=26% Similarity=0.417 Sum_probs=356.9
Q ss_pred CCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCC
Q 012658 79 SGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKP 158 (459)
Q Consensus 79 ~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp 158 (459)
+..+++++||.||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|+++.++|+++++.|+|||
T Consensus 5 s~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 82 (462)
T 3etf_A 5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFK--KWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKP 82 (462)
T ss_dssp -CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC
T ss_pred ccCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 456799999999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred hhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeec
Q 012658 159 FEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 238 (459)
Q Consensus 159 ~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKp 238 (459)
+.++. .|+..+++.++|+++++++..+.......+...++.++|+|||++|+|||||+...++++++||++||+||+||
T Consensus 83 ~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKp 161 (462)
T 3etf_A 83 IKQAR-AEVTKSAALCDWYAEHGPAMLNPEPTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKH 161 (462)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHHHHTSCEECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHH-HHHHHHHHHHHHHHHhHHHhcCCcccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEEC
Confidence 99976 59999999999999998887665522223567889999999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcC
Q 012658 239 AEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS 318 (459)
Q Consensus 239 s~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~ 318 (459)
|+.+|+++..|+++|.++|+|+|++|+|+| +.+.+..|+.|++|+.|.||||+.+|+.|++.+++ +++|+++|+||||
T Consensus 162 s~~tp~~~~~l~~~l~~aglP~gv~~vv~g-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~-~~~~v~lElGGk~ 239 (462)
T 3etf_A 162 APNVTGCAQMIARILAEAGTPAGVYGWVNA-NNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGGSD 239 (462)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCBTTEEECCC-CHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHH-TTCCEEEECCCCE
T ss_pred CCCCcHHHHHHHHHHHHhCCCcCeEEEEEC-CHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhc-cCCceEEEcCCCC
Confidence 999999999999999999999999999998 56778999999999999999999999999999988 8999999999999
Q ss_pred cEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHH
Q 012658 319 PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 398 (459)
Q Consensus 319 p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i 398 (459)
|+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||+++..+++++
T Consensus 240 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v 319 (462)
T 3etf_A 240 PFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDEL 319 (462)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHH
T ss_pred ccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 399 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 399 ~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
.++|++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 320 ~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~ 379 (462)
T 3etf_A 320 HQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDA 379 (462)
T ss_dssp HHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSH
T ss_pred HHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCH
Confidence 999999999999999999865567999999999999999999999999999999999985
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-80 Score=690.17 Aligned_cols=388 Identities=30% Similarity=0.479 Sum_probs=368.0
Q ss_pred ccCceecCEeeeCCCCCeeeeeCCCC-CCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHc
Q 012658 65 YTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (459)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~ 143 (459)
..++||||+|+. ++++++++||+| |+++++++.++.+|+++|++.|++||. .|+.++..+|.++|++++++|+++
T Consensus 531 ~~~~~I~G~~~~--~~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eRa~iL~~~Adll~~~ 606 (1026)
T 4f9i_A 531 TYPLFINGKEVR--TNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFP--AWRDTDPRTRAEYLLKAAQAARKR 606 (1026)
T ss_dssp EECEEETTEEEC--CSCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccCceECCEEec--CCCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHHH
Confidence 457899999986 578999999998 999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCC-CCCceEEEEEccceEEEEEcCCCchHHhhHH
Q 012658 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (459)
Q Consensus 144 ~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (459)
.++|++++++|+|||+.++. .|+..+++.++||+.+++++.+...+. ..+..++..++|+|||++|+|||||+.+.++
T Consensus 607 ~~eLa~~~~~E~GK~~~ea~-~Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~ 685 (1026)
T 4f9i_A 607 LFELSAWQVLEIGKQWDQAY-ADVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMG 685 (1026)
T ss_dssp HHHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHHhCCChhhHH-HHHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHHH
Confidence 99999999999999999976 599999999999999998876654332 3466788999999999999999999999999
Q ss_pred HHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHH
Q 012658 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (459)
Q Consensus 223 ~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~ 302 (459)
++++||++||+||+|||+.+|+++..++++|.++|+|+|+||+|+|++.++++.|++||+|++|+||||+++|+.|++.+
T Consensus 686 ~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~a 765 (1026)
T 4f9i_A 686 MASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERA 765 (1026)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999998
Q ss_pred Hh-----cCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccC
Q 012658 303 AK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 377 (459)
Q Consensus 303 a~-----~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG 377 (459)
+. ++++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|
T Consensus 766 a~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG 845 (1026)
T 4f9i_A 766 AKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVG 845 (1026)
T ss_dssp TSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBC
T ss_pred hcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccC
Confidence 73 3689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCC
Q 012658 378 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGEN 457 (459)
Q Consensus 378 ~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~ 457 (459)
+|.++++++||+++..+++++.++|++++++| ++++||......|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 846 ~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d 924 (1026)
T 4f9i_A 846 PSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKD 924 (1026)
T ss_dssp CTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESS
T ss_pred CcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeCC
Confidence 99999999999999999999999999999999 99999976544599999999999999999999999999999999998
Q ss_pred C
Q 012658 458 F 458 (459)
Q Consensus 458 ~ 458 (459)
+
T Consensus 925 ~ 925 (1026)
T 4f9i_A 925 F 925 (1026)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-80 Score=643.85 Aligned_cols=373 Identities=27% Similarity=0.354 Sum_probs=349.5
Q ss_pred CCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCC
Q 012658 78 ASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGK 157 (459)
Q Consensus 78 ~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gk 157 (459)
.+++|++++||+||+++++++.++.+|+++|++.|++||+ .|++++..+|.++|+++++.|++|.++|++++++|+||
T Consensus 3 a~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk 80 (474)
T 4h7n_A 3 AMTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQS--RWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGR 80 (474)
T ss_dssp CCCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHH--HHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSC
T ss_pred CCCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4678999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred ChhhhhhcchHHHHHHHHHHHHhhhhhcCccc-CC-CCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEE
Q 012658 158 PFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA-PA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIV 235 (459)
Q Consensus 158 p~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~-~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VV 235 (459)
+... ..|+...+..+++|+..++++..... +. ..+...+..++|+|||++|+|||||+.+.++++++||++||+||
T Consensus 81 ~~~~--~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VV 158 (474)
T 4h7n_A 81 LSIT--VLEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVV 158 (474)
T ss_dssp SHHH--HHHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEE
T ss_pred cHHH--HHHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCcee
Confidence 8544 35999999999999988877654332 22 23455677889999999999999999999999999999999999
Q ss_pred eecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecC
Q 012658 236 LKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG 315 (459)
Q Consensus 236 lKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelg 315 (459)
+|||+.+|+++..+++++.++|+|+|++|+++| +.+.+..|..| +++|.||||+.+|+.|++.+++ ++||+++|||
T Consensus 159 lKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa~-~~~~v~lElG 234 (474)
T 4h7n_A 159 VKPSEIAPRFVAPLLMALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTGSVATGREVAETAAR-RFIPAYLELG 234 (474)
T ss_dssp EEECTTSCTTHHHHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHHH-HTCCEEEECC
T ss_pred ecccccCchHHHHHHhhhhhhcccccceeeccc-cchhhhhhhhc--cceEEeccccchhhhhhhhhhc-ccccccccCC
Confidence 999999999999999999999999999999999 66788899876 8999999999999999999988 7899999999
Q ss_pred CcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHH
Q 012658 316 GKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQF 395 (459)
Q Consensus 316 G~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~ 395 (459)
||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++.++++|+|.++++++||+++..++
T Consensus 235 Gk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~ 314 (474)
T 4h7n_A 235 GKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQA 314 (474)
T ss_dssp CCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHH
T ss_pred CcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCeEEeCCcccC-CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 396 EKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 396 ~~i~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++.+++++++++|+++++||...+ .+|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 315 ~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~ 378 (474)
T 4h7n_A 315 GIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDV 378 (474)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSH
T ss_pred HHHHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCH
Confidence 9999999999999999999997543 46899999999999999999999999999999999985
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-79 Score=651.27 Aligned_cols=384 Identities=23% Similarity=0.300 Sum_probs=349.0
Q ss_pred cCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHh-ccCCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 012658 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKA-FDEGPWPRMTAYERSKIILRFADLLERHN 144 (459)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A-~~~g~W~~~~~~~R~~iL~~~a~~l~~~~ 144 (459)
.++||||+|+.+.+ .+++++||.||+++++++.++ +|+++|++.|++| |+ .|+.++..+|.++|+++++.|++|.
T Consensus 8 ~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (534)
T 2y53_A 8 LKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGA--ALRALTYAQRAARLADIVKLLQAKR 83 (534)
T ss_dssp CCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred hhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhh--hhhhCCHHHHHHHHHHHHHHHHHhH
Confidence 57899999997644 579999999999999999988 9999999999999 58 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCc-------ccCCC--CCceEEEEEccc-eEEEEEcCCC
Q 012658 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL-------TAPAD--GPYHVQTLHEPI-GVAGQIIPWN 214 (459)
Q Consensus 145 ~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~-------~~~~~--~~~~~~~~~~P~-GVv~~i~p~n 214 (459)
++|++++++|+|||+.++. .|+..+++.++||+.+++++.+. ..+.. .....+..++|+ |||++|+|||
T Consensus 84 ~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN 162 (534)
T 2y53_A 84 GDYYAIATANSGTTRNDSA-VDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFN 162 (534)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTT
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCc
Confidence 9999999999999999886 59999999999999988776432 11221 222467889997 9999999999
Q ss_pred chHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcC-CCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChH
Q 012658 215 FPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 293 (459)
Q Consensus 215 ~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aG-lP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~ 293 (459)
||+.+.++++++||++||+||+|||+.+|+++..|++++.++| +|+|+||+|+|++.+++..| +++|+|.||||+.
T Consensus 163 ~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~l~~~l---~~vd~V~FTGS~~ 239 (534)
T 2y53_A 163 FPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAGLLDQI---RSFDVVSFTGSAD 239 (534)
T ss_dssp CTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTTSGGGC---CTTCEEEEESCHH
T ss_pred hHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHHHHhcc---cccCEEEEECCHH
Confidence 9999999999999999999999999999999999999999999 89999999999654433222 5799999999999
Q ss_pred HHHHHHHHHH-hcCCCceEEecCCcCcEEEccCC-----CHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHH
Q 012658 294 TGKIVLQLAA-KSNLKPVTLELGGKSPFIVCEDA-----DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 367 (459)
Q Consensus 294 ~g~~i~~~~a-~~~~~pv~lelgG~~p~iV~~dA-----Dld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l 367 (459)
+|+.|++.++ ..++||+++|||||||+||++|| |+|.|++.+++++|.|+||.|++++|||||+++||+|+++|
T Consensus 240 ~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l 319 (534)
T 2y53_A 240 TAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEAL 319 (534)
T ss_dssp HHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHH
T ss_pred HHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHHH
Confidence 9999998775 23899999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCccc------CCCCceEecEEEeeCCCC--CC
Q 012658 368 NALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL------GAKGYYIKPTVFTGVKVL--IL 439 (459)
Q Consensus 368 ~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~------~~~g~~~~PTvl~~v~~~--~~ 439 (459)
+++++++++|+|+++++++||++++.+++++.++|+++ ++|+++++||... ..+|+|++|||+.+++++ |+
T Consensus 320 ~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~ 398 (534)
T 2y53_A 320 KAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATL 398 (534)
T ss_dssp HHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCSS
T ss_pred HHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccCH
Confidence 99999999999999999999999999999999999999 6899999999642 135899999999999987 69
Q ss_pred CcCcCCCcceEEEEecC---CC
Q 012658 440 ISPASISPNILHTFNGE---NF 458 (459)
Q Consensus 440 i~~~EifgPvl~v~~~~---~~ 458 (459)
+++||+||||++|++|+ |+
T Consensus 399 i~~eEiFGPVl~v~~~~~~~~~ 420 (534)
T 2y53_A 399 LHDVEVFGPVASVAPYRVTTDT 420 (534)
T ss_dssp TTTCCCSSSEEEEEEECCCCC-
T ss_pred HHhCCCcCCEEEEEEECCCCCc
Confidence 99999999999999999 75
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-76 Score=610.46 Aligned_cols=363 Identities=24% Similarity=0.348 Sum_probs=324.0
Q ss_pred CeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChh
Q 012658 81 KTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE 160 (459)
Q Consensus 81 ~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~ 160 (459)
..+++.||+||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|+++.++|++++++|+|||+.
T Consensus 6 ~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 83 (457)
T 3lns_A 6 HHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFA--TRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKD 83 (457)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHH
T ss_pred ccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH
Confidence 4678999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred hhhhcchHHHHHHHHHHHHhhhhhcCc-ccCC---CCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEe
Q 012658 161 QSAQTEVPMTTRLFRYYAGWADKIQGL-TAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVL 236 (459)
Q Consensus 161 ~a~~~ev~~~~~~l~~~a~~~~~~~~~-~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVl 236 (459)
++...|+..+++.++|+++.+++.... ..+. ..+...+..++|+|||++|+|||||+...++++++||++||+||+
T Consensus 84 ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVl 163 (457)
T 3lns_A 84 VVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCII 163 (457)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEE
Confidence 987679999999999999988776542 2221 134678899999999999999999999999999999999999999
Q ss_pred ecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCC
Q 012658 237 KTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGG 316 (459)
Q Consensus 237 Kps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG 316 (459)
|||+.+|+++..|++++.++ +|+|+||+|+| +.+.+..|+. ++||+|.||||+.+|+.|++.+++ ++||+++|+||
T Consensus 164 Kps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa~-~l~pv~lElGG 239 (457)
T 3lns_A 164 KPSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAK-HLTPVVLELGG 239 (457)
T ss_dssp ECCTTCHHHHHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCC
T ss_pred ECCCCChHHHHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHhh-ccCceEEECCC
Confidence 99999999999999999999 99999999999 7788899998 689999999999999999999987 89999999999
Q ss_pred cCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHH
Q 012658 317 KSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFE 396 (459)
Q Consensus 317 ~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~ 396 (459)
|||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++ |.++ ++||++++.+++
T Consensus 240 k~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~ 314 (457)
T 3lns_A 240 KCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQVQ 314 (457)
T ss_dssp CEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHH
T ss_pred CCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999988 7776 999999999999
Q ss_pred HHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 397 KILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 397 ~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++.++|+++ ++++++||... .+|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 315 rv~~~i~~a---~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 372 (457)
T 3lns_A 315 RLVSLLEAT---QGQVLVGSQAD-VSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSV 372 (457)
T ss_dssp HHHHHHHHC---CSEEEECCCEE-GGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCH
T ss_pred HHHHHHHhc---CCeEEeCCccC-CCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCH
Confidence 999999985 35999999753 36899999999999999999999999999999999985
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-76 Score=620.38 Aligned_cols=375 Identities=22% Similarity=0.273 Sum_probs=340.0
Q ss_pred CCccCceecCEeeeCCCCCeeeeeCCCCCCEEE-EEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHH
Q 012658 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVIT-HVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE 141 (459)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~-~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~ 141 (459)
....++||||+|+.+.+ ++||+||++++ +++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|+
T Consensus 27 ~~~~~~~I~G~~~~~~~-----v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 99 (528)
T 3v4c_A 27 TPKGKHLVAGEWLDGAG-----TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFW--TYGYSSRKERAAFLRAIADEIE 99 (528)
T ss_dssp CCCCCEEETTEEECCSS-----EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHH
T ss_pred ccccCceECCEEecCCC-----ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHH
Confidence 34458999999997532 99999999998 9999999999999999999999 9999999999999999999999
Q ss_pred HcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhh--cCccc----CC---CCCceEEEEEccceEEEEEcC
Q 012658 142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI--QGLTA----PA---DGPYHVQTLHEPIGVAGQIIP 212 (459)
Q Consensus 142 ~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~--~~~~~----~~---~~~~~~~~~~~P~GVv~~i~p 212 (459)
+|.++|++++++|+|||+.++. .|+..+++.++||++++++. .+... +. ..+...+..++|+|||++|+|
T Consensus 100 ~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P 178 (528)
T 3v4c_A 100 ARAEAITEIGSQETGLPEARLN-GERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGA 178 (528)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECC
T ss_pred HhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECC
Confidence 9999999999999999998876 59999999999999988872 22211 11 123456889999999999999
Q ss_pred CCchHHhhH--HHHHHHHhcCCeEEeecCCCchHHHHHHHHHH----HHcCCCCCcEEeecCCChhHHHHHHcCCCccEE
Q 012658 213 WNFPLLMFA--WKVGPALACGNTIVLKTAEQTPLSALYVSKLL----HEAGLPPGVLNIVSGYGPTAGAALASHMEVDKL 286 (459)
Q Consensus 213 ~n~P~~~~~--~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll----~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v 286 (459)
||||+.+.+ +++++||++||+||+|||+.+|+++..+++++ .++|+|+|+||+|+|.+.+.+..|+.||+||+|
T Consensus 179 wN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V 258 (528)
T 3v4c_A 179 SNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAV 258 (528)
T ss_dssp SSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEE
T ss_pred CcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEE
Confidence 999999865 99999999999999999999999999999875 568999999999999888899999999999999
Q ss_pred EeeCChHHHHHHHHHHHhcCC--CceEEecCCcCcEEEccCC---CHHHHHHHHHHHhhccCCCccccCceeEeeCc-ch
Q 012658 287 AFTGSTTTGKIVLQLAAKSNL--KPVTLELGGKSPFIVCEDA---DVDKAAELAHYALFFNQGQCCCAGSRTFVHES-VY 360 (459)
Q Consensus 287 ~ftGs~~~g~~i~~~~a~~~~--~pv~lelgG~~p~iV~~dA---Dld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~-v~ 360 (459)
.||||+.+|+.|++.+++ ++ +|+++|+|||||+||++|| |+|.|++.+++++|.|+||.|++++|||||++ +|
T Consensus 259 ~fTGS~~~G~~i~~~aa~-~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~ 337 (528)
T 3v4c_A 259 GFTGSLAGGRALFDLCAA-RPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADA 337 (528)
T ss_dssp EEESCHHHHHHHHHHHHH-SSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHH
T ss_pred EEECChHHHHHHHHHHhh-ccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHH
Confidence 999999999999999987 77 9999999999999999999 88999999999999999999999999999997 99
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCC---
Q 012658 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVL--- 437 (459)
Q Consensus 361 d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~--- 437 (459)
|+|+++|+++++++++ ++.+||+++..+.+++.++++ ++|+++++||.. .|+|++|||+.+++++
T Consensus 338 d~f~~~l~~~~~~~~~------~~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~---~g~~~~PTvl~~~~~~~~~ 405 (528)
T 3v4c_A 338 DRFTTAAVEALAKVAP------QTMLTDGIAKAYRDGQARFAT---RNAVKPLLATES---SGRDASPNLFETTGAQFLA 405 (528)
T ss_dssp HHHHHHHHHHHHTCCC------EECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC---CTTEECCEEEEEEHHHHHH
T ss_pred HHHHHHHHHHHHhccc------CCCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc---CCceeccEEEEecCccccc
Confidence 9999999999998864 356899998888877777653 479999999974 6999999999998888
Q ss_pred CCCcCcCCCcceEEEEecCCC
Q 012658 438 ILISPASISPNILHTFNGENF 458 (459)
Q Consensus 438 ~~i~~~EifgPvl~v~~~~~~ 458 (459)
|++++||+||||++|++|+|+
T Consensus 406 ~~i~~eEiFGPVl~V~~~~~~ 426 (528)
T 3v4c_A 406 DHALGEEVFGPLGLVVRVGSP 426 (528)
T ss_dssp CGGGGCCCSSSEEEEEEESSH
T ss_pred ChhhcccccCCeEEEEecCCH
Confidence 899999999999999999985
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-74 Score=598.37 Aligned_cols=347 Identities=27% Similarity=0.353 Sum_probs=317.9
Q ss_pred cCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHH
Q 012658 99 EGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA 178 (459)
Q Consensus 99 ~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a 178 (459)
..+.+|++++++.|++||+ .|+.++..+|.++|+++++.|++|.++|++++++|+|||+.++...|+..+...+++++
T Consensus 14 ~~s~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~ 91 (469)
T 3sza_A 14 GSHMSKISEAVKRARAAFS--SGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMI 91 (469)
T ss_dssp ----CHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4567799999999999999 99999999999999999999999999999999999999999987679999999999888
Q ss_pred HhhhhhcCcc----cCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHH
Q 012658 179 GWADKIQGLT----APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH 254 (459)
Q Consensus 179 ~~~~~~~~~~----~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~ 254 (459)
.......... .....+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..|++++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~ 171 (469)
T 3sza_A 92 QKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIP 171 (469)
T ss_dssp HHHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHH
T ss_pred HHHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHH
Confidence 7665543221 111224568899999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHH
Q 012658 255 EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAEL 334 (459)
Q Consensus 255 ~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~ 334 (459)
++ +|+|++|+|+|+ .+.+..|+.| +||+|.||||+.+|+.|++.+++ ++||+++|||||||+||++|||+|.|++.
T Consensus 172 ~a-lP~gvv~vv~g~-~~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa~-~lkpv~lELGGk~p~iV~~dADl~~Aa~~ 247 (469)
T 3sza_A 172 QY-LDKDLYPVINGG-VPETTELLKE-RFDHILYTGSTGVGKIIMTAAAK-HLTPVTLELGGKSPCYVDKNCDLDVACRR 247 (469)
T ss_dssp HH-SCTTTSCBCCCS-HHHHHHHTTS-CCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCCCCEEEECTTSCHHHHHHH
T ss_pred Hh-CCcceEEEEECC-HHHHHHHHhc-CCCEEEEECCHHHHHHHHHHHhh-ccCceEEecCCCCceEECCCCCHHHHHHH
Confidence 98 999999999994 4556677777 89999999999999999999987 89999999999999999999999999999
Q ss_pred HHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEe
Q 012658 335 AHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLET 414 (459)
Q Consensus 335 i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~ 414 (459)
+++++|.|+||.|++++|||||+++||+|+++|+++++++ +|+|.++++++||+++..+++++.++| +||++++
T Consensus 248 i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~ 321 (469)
T 3sza_A 248 IAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAY 321 (469)
T ss_dssp HHHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEE
T ss_pred HHHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEe
Confidence 9999999999999999999999999999999999999998 699999999999999999999999998 6999999
Q ss_pred CCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 415 GGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 415 gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
||... .+|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 322 GG~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 364 (469)
T 3sza_A 322 GGTGD-AATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSL 364 (469)
T ss_dssp CCCEE-TTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSH
T ss_pred CCccC-CCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCH
Confidence 99764 46899999999999999999999999999999999985
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-74 Score=609.53 Aligned_cols=364 Identities=20% Similarity=0.264 Sum_probs=333.7
Q ss_pred CCCCCeeeeeCCCCCCEE-EEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHc
Q 012658 77 SASGKTFPTLDPRTGDVI-THVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDN 155 (459)
Q Consensus 77 ~~~~~~~~v~~P~tg~~i-~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~ 155 (459)
+.++++++++||+||+++ ++++.++.+|++++++.|++||+ .|+.++..+|.++|+++++.|++|.++|++++++|+
T Consensus 3 ~~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~ 80 (510)
T 1ez0_A 3 PQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR--DFRRLNNSKRASLLRTIASELEARSDDIIARAHLET 80 (510)
T ss_dssp --CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 446788999999999999 79999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCChhhhhhcchHHHHHHHHHHHHhhhh--hcCccc----CC--CCC-ceEEEEEccceEEEEEcCCCchHHhh--HHHH
Q 012658 156 GKPFEQSAQTEVPMTTRLFRYYAGWADK--IQGLTA----PA--DGP-YHVQTLHEPIGVAGQIIPWNFPLLMF--AWKV 224 (459)
Q Consensus 156 Gkp~~~a~~~ev~~~~~~l~~~a~~~~~--~~~~~~----~~--~~~-~~~~~~~~P~GVv~~i~p~n~P~~~~--~~~l 224 (459)
|||+.++. .|+..+++.++||++++++ ..+... +. ..+ ...+..++|+|||++|+|||||+.+. .+++
T Consensus 81 Gk~~~~a~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 159 (510)
T 1ez0_A 81 ALPEVRLT-GEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDT 159 (510)
T ss_dssp CCCHHHHH-HHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHH
T ss_pred CCCHHHHH-HHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHH
Confidence 99998764 6999999999999998876 333222 11 112 24678999999999999999999985 4999
Q ss_pred HHHHhcCCeEEeecCCCchHHHHHHHHHH----HHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHH
Q 012658 225 GPALACGNTIVLKTAEQTPLSALYVSKLL----HEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (459)
Q Consensus 225 ~~ALaaGN~VVlKps~~~p~~~~~l~~ll----~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 300 (459)
++||++||+||+|||+.+|+++..|++++ .++|+|+|++|+|+|.+.+.+..|++|++||+|.||||+.+|+.|++
T Consensus 160 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~ 239 (510)
T 1ez0_A 160 ASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFN 239 (510)
T ss_dssp HHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHH
Confidence 99999999999999999999999999998 56799999999999987889999999999999999999999999999
Q ss_pred HHHhcCC--CceEEecCCcCcEEEccCCCHH--HHHHHHHHHhhccCCCccccCceeEeeCc-chHHHHHHHHHHHHhhc
Q 012658 301 LAAKSNL--KPVTLELGGKSPFIVCEDADVD--KAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRV 375 (459)
Q Consensus 301 ~~a~~~~--~pv~lelgG~~p~iV~~dADld--~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~-v~d~f~~~l~~~~~~~~ 375 (459)
.+++ ++ ||+++|||||||+||++|||+| .|++.+++++|.|+||.|++++|||||++ +||+|+++|++++++++
T Consensus 240 ~aa~-~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~ 318 (510)
T 1ez0_A 240 LAHE-RPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQS 318 (510)
T ss_dssp HHHH-SSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCC
T ss_pred Hhhc-cCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcC
Confidence 9987 64 9999999999999999999999 99999999999999999999999999999 99999999999999887
Q ss_pred cCCCCCCCCcccccCCHHHHHHHHHHHHHHHh-CCCeEEeCCcccCCCCceEecEEEeeCCCC---CCCcCcCCCcceEE
Q 012658 376 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD-GGAKLETGGERLGAKGYYIKPTVFTGVKVL---ILISPASISPNILH 451 (459)
Q Consensus 376 vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~-~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~---~~i~~~EifgPvl~ 451 (459)
+ ||++++.+.+++.++|+++++ +|+++++||. .|+|++|||+.+++++ |++++||+||||++
T Consensus 319 ~----------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~----~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~ 384 (510)
T 1ez0_A 319 P----------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA----ESPCVASALFVTSSENWRKHPAWEEEIFGPQSL 384 (510)
T ss_dssp C----------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC----CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEE
T ss_pred C----------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC----CCCEecCEEEEecCCccccCHHHcCCccCCeEE
Confidence 3 688899999999999999994 7999999996 2899999999988888 99999999999999
Q ss_pred EEecCCC
Q 012658 452 TFNGENF 458 (459)
Q Consensus 452 v~~~~~~ 458 (459)
|++|+|+
T Consensus 385 v~~~~~~ 391 (510)
T 1ez0_A 385 IVVCENV 391 (510)
T ss_dssp EEEESSH
T ss_pred EEEeCCH
Confidence 9999984
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-72 Score=620.36 Aligned_cols=352 Identities=30% Similarity=0.421 Sum_probs=333.6
Q ss_pred EecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHH
Q 012658 97 VAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRY 176 (459)
Q Consensus 97 v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~ 176 (459)
++.++.+|+++|++.|++||. .|+.++..+|.++|+++++.|++|.++|++++++|+|||+.++. .|+..+++.++|
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~-~Ev~~ai~~lr~ 620 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFA--GWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDAL-SELREAADFCRY 620 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHH-HHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHH-HHHHHHHHHHHH
Confidence 889999999999999999999 99999999999999999999999999999999999999999975 599999999999
Q ss_pred HHHhhhhhcCcc--cCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHH
Q 012658 177 YAGWADKIQGLT--APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH 254 (459)
Q Consensus 177 ~a~~~~~~~~~~--~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~ 254 (459)
|+.++++..+.. .+...+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++..+++++.
T Consensus 621 ~a~~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~ 700 (1001)
T 3haz_A 621 YAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLH 700 (1001)
T ss_dssp HHHHHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred HHHHHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHH
Confidence 999998876643 344556788899999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhc--CCCceEEecCCcCcEEEccCCCHHHHH
Q 012658 255 EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS--NLKPVTLELGGKSPFIVCEDADVDKAA 332 (459)
Q Consensus 255 ~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~--~~~pv~lelgG~~p~iV~~dADld~aa 332 (459)
++|+|+|+||+|+|++.+ +..|+.||+|++|+||||+++|+.|++.++++ +++|+++|+|||||+||++|||+|.|+
T Consensus 701 eAGlP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa 779 (1001)
T 3haz_A 701 EAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVA 779 (1001)
T ss_dssp HHTCCTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHH
T ss_pred HhCcCcCcEEEEecCchH-HHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHH
Confidence 999999999999998777 99999999999999999999999999998863 489999999999999999999999999
Q ss_pred HHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeE
Q 012658 333 ELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKL 412 (459)
Q Consensus 333 ~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v 412 (459)
+.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++++++||+++..+++++.++|++++++| ++
T Consensus 780 ~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v 858 (1001)
T 3haz_A 780 DDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL 858 (1001)
T ss_dssp HHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE
T ss_pred HHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988 88
Q ss_pred EeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCC
Q 012658 413 ETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGEN 457 (459)
Q Consensus 413 ~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~ 457 (459)
+||... ..|+|++|||+.+ ++|.+++||+||||++|++|++
T Consensus 859 -~gg~~~-~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~ 899 (1001)
T 3haz_A 859 -HFAGPA-PEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRP 899 (1001)
T ss_dssp -EEECCC-CSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECG
T ss_pred -eccccC-CCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCC
Confidence 888653 3599999999975 7899999999999999999985
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-65 Score=526.99 Aligned_cols=335 Identities=18% Similarity=0.222 Sum_probs=289.7
Q ss_pred EecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHH-H
Q 012658 97 VAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLF-R 175 (459)
Q Consensus 97 v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l-~ 175 (459)
++.++.+|++++++.|++||+ .|+.++.++|.++|+++++.|+++.++|+++++.|+|||..++...|+..+.+.+ +
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~--~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~ 78 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQE--EFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYN 78 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 356899999999999999999 9999999999999999999999999999999999999999987655777777766 3
Q ss_pred HHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHH-
Q 012658 176 YYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH- 254 (459)
Q Consensus 176 ~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~- 254 (459)
++... +..+ ..+.+.+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.
T Consensus 79 ~~~~~--~~~g-~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~ 155 (452)
T 3my7_A 79 KYKDE--QTCG-ILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLD 155 (452)
T ss_dssp HHTTC--CCSE-EC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred Hhhhc--cccc-cccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHH
Confidence 44321 1111 1222334556889999999999999999999999999999999999999999999999998888875
Q ss_pred ---HcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEccCCCHHHH
Q 012658 255 ---EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKA 331 (459)
Q Consensus 255 ---~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~dADld~a 331 (459)
++|+|+|+||+|+|++.+.++.|+.||+|+.|.||||+.+++ .++. ++||+++|+|||+|+||++|||+|.|
T Consensus 156 a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~~----~a~~-~~kp~~~e~gG~~p~iV~~dADl~~A 230 (452)
T 3my7_A 156 AAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK----AAYS-SGKPAIGVGAGNVPVVIDETADIKRA 230 (452)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHHH----HHHT-SSSCEEECC--CEEEEECTTSCHHHH
T ss_pred HHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHHH----HHHh-cCCCEEecCCCCCeEEEeCCCCHHHH
Confidence 799999999999998889999999999999999999998654 3444 78999999999999999999999999
Q ss_pred HHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCe
Q 012658 332 AELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK 411 (459)
Q Consensus 332 a~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~ 411 (459)
++.+++++|+|+||.|+++++||||+++||+|+++|+++ .||++++++++++.++|+++.+.|++
T Consensus 231 a~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~ 295 (452)
T 3my7_A 231 VASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNAK 295 (452)
T ss_dssp HHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECGG
T ss_pred HHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCCe
Confidence 999999999999999999999999999999999999865 39999999999999999977677888
Q ss_pred EEeCCccc---CCCCceEecEE-------EeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 412 LETGGERL---GAKGYYIKPTV-------FTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 412 v~~gg~~~---~~~g~~~~PTv-------l~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+ +||... ...|+|++||+ +.+++++|++++ |+||||++|++|+|+
T Consensus 296 v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~ 350 (452)
T 3my7_A 296 I-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNF 350 (452)
T ss_dssp G-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSH
T ss_pred E-ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCH
Confidence 7 477532 23589999997 668899999886 899999999999985
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-65 Score=528.90 Aligned_cols=338 Identities=17% Similarity=0.219 Sum_probs=296.4
Q ss_pred EEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHH
Q 012658 96 HVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFR 175 (459)
Q Consensus 96 ~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~ 175 (459)
.++.++.+|++++++.|++||+ .|+.++..+|.++|+++++.|+++.++|+++++.|+|||..++...+...+++.+.
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~ 82 (464)
T 3k9d_A 5 DKDLRSIQEVRNLIESANKAQK--ELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVY 82 (464)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHH
Confidence 3556788999999999999999 99999999999999999999999999999999999999988765444444444444
Q ss_pred HHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHH----
Q 012658 176 YYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSK---- 251 (459)
Q Consensus 176 ~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~---- 251 (459)
++....+ ..+ ..+.+.+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++
T Consensus 83 ~~~~~~~-~~g-~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~ 160 (464)
T 3k9d_A 83 NYIKDMK-TIG-MLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISE 160 (464)
T ss_dssp HHHTTCC-CSE-EEEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred Hhhhccc-ccc-eeccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHH
Confidence 3332211 111 1122345678889999999999999999999999999999999999999999999999998654
Q ss_pred HHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecC-CcCcEEEccCCCHHH
Q 012658 252 LLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG-GKSPFIVCEDADVDK 330 (459)
Q Consensus 252 ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelg-G~~p~iV~~dADld~ 330 (459)
++.++|+|+|+||+|+|++.+.+..|+.||+||+|.||||+.+ ++.+++ ++||+ +|+| ||+|+||++|||+|.
T Consensus 161 ~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~-~~kpv-lelG~G~~p~iV~~dADl~~ 234 (464)
T 3k9d_A 161 AAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAYS-SGTPA-IGVGPGNGPAFIERSANIPR 234 (464)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHTT-SSSCE-EEBCCCCCEEEECTTSCHHH
T ss_pred HHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHHh-cCCcE-EeeCCCCCeEEECCCCCHHH
Confidence 5688999999999999988899999999999999999999985 444554 78999 7888 999999999999999
Q ss_pred HHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHH-------HhhccCCCC-CCCCcccccCCHHHHHHHHHHH
Q 012658 331 AAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALA-------MKRVVGDPF-KGGIQQGPQIDSEQFEKILKYI 402 (459)
Q Consensus 331 aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~-------~~~~vG~p~-~~~~~~Gpl~~~~~~~~i~~~i 402 (459)
|++.+++++|+|+||.|+++++||||+++||+|+++|+++. +.+++|+|. ++++++||+++.++++++.+++
T Consensus 235 Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~ 314 (464)
T 3k9d_A 235 AVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLA 314 (464)
T ss_dssp HHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999885 577899998 7889999999999999999999
Q ss_pred HHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 403 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 403 ~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+.++.+|+++++||.. +++++|++. +|+||||++|++|+|+
T Consensus 315 ~~a~~~ga~vl~gg~~--------------~v~~~~~~~-~E~fgPVl~v~~~~~~ 355 (464)
T 3k9d_A 315 GLTVPADARVLIAEET--------------KVGAKIPYS-REKLAPILAFYTAETW 355 (464)
T ss_dssp TCCCCTTCCEEEEECC--------------CCSTTCGGG-SCCCSSEEEEEEESSH
T ss_pred hhhhcCCCEEEEcCCC--------------CCCCCCccc-ccccCceEEEEEeCCH
Confidence 9988999999999852 577888876 8999999999999985
|
| >2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-64 Score=523.87 Aligned_cols=322 Identities=19% Similarity=0.137 Sum_probs=259.2
Q ss_pred eeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHc-------C
Q 012658 84 PTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDN-------G 156 (459)
Q Consensus 84 ~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~-------G 156 (459)
-++||.||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|+++.++|++++++|+ |
T Consensus 10 ~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~G 87 (463)
T 2h5g_A 10 GVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGR--MLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLA 87 (463)
T ss_dssp -------------------CCHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSC
T ss_pred CCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCC
Confidence 4789999999999999999999999999999999 999999999999999999999999999999999999 7
Q ss_pred CChh----hhhhcchHHHHHHHHHHHHhhhhhcCcccCCC---CCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHh
Q 012658 157 KPFE----QSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD---GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALA 229 (459)
Q Consensus 157 kp~~----~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~---~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALa 229 (459)
||+. ++. .|+..+++.++|+++++++..+...+.. .+...++.++|+|||++|+||| |.... +++++||+
T Consensus 88 k~~~~rl~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALa 164 (463)
T 2h5g_A 88 APLLKRLSLST-SKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIA 164 (463)
T ss_dssp HHHHHTTCCCH-HHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHH
T ss_pred CchhhhhhhhH-HHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHH
Confidence 9987 343 6999999999999988877766553321 3446788999999999999887 87777 89999999
Q ss_pred cCCeEEeecCCCchHHHHHHHHHHHHc----CCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhc
Q 012658 230 CGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305 (459)
Q Consensus 230 aGN~VVlKps~~~p~~~~~l~~ll~~a----GlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~ 305 (459)
+||+||+|||+.+|+++..|++++.++ | |+|+||+|+| +.+++..|..||+||+|.||||+.+|+.|++.++
T Consensus 165 aGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa-- 240 (463)
T 2h5g_A 165 SGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNT-REEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK-- 240 (463)
T ss_dssp HTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCT-TCCC-------CCCSEEEEESCHHHHHHHHHHCS--
T ss_pred cCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcC-CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--
Confidence 999999999999999999999999999 9 9999999999 6778999999999999999999999999998875
Q ss_pred CCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCc
Q 012658 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 385 (459)
Q Consensus 306 ~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~ 385 (459)
+||+++|||||||+||++|||+|.|++.+++++|.| ||.|++++|||||+++||
T Consensus 241 -l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d------------------------ 294 (463)
T 2h5g_A 241 -GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR------------------------ 294 (463)
T ss_dssp -SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT------------------------
T ss_pred -CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc------------------------
Confidence 799999999999999999999999999999999999 999999999999999998
Q ss_pred ccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 386 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 386 ~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
||+ ++ +++++++++|++++.|+... ..|+|+ +++|++++||+||||++|++|+|+
T Consensus 295 -~p~-----~~---~~i~~~~~~Ga~v~~G~~~~-~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~ 349 (463)
T 2h5g_A 295 -TPL-----FD---QIIDMLRVEQVKIHAGPKFA-SYLTFS--------PSEVKSLRTEYGDLELCIEVVDNV 349 (463)
T ss_dssp -SHH-----HH---HHHHHHHHTTCEEEECHHHH-C-----------------CCSSCCCCSSEEEEEEESSH
T ss_pred -hHH-----HH---HHHHHHHhCCCEEEeCCccc-ccCccC--------CCCchHHhccccCceEEEEEeCCH
Confidence 343 23 45888889999998555422 235553 579999999999999999999985
|
| >1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-63 Score=513.94 Aligned_cols=314 Identities=17% Similarity=0.132 Sum_probs=266.1
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCCh----hhhhhcchHH-HHHHHHHHH
Q 012658 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPF----EQSAQTEVPM-TTRLFRYYA 178 (459)
Q Consensus 104 dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~----~~a~~~ev~~-~~~~l~~~a 178 (459)
.++++++.|++||+ .|+.++..+|.++|+++++.|+++.++|++++++|+|||. .++...|+.. +...++|++
T Consensus 15 ~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a 92 (468)
T 1vlu_A 15 SSQQIAKNARKAGN--ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVML 92 (468)
T ss_dssp HHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHH
T ss_pred hHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHH
Confidence 58999999999999 9999999999999999999999999999999999999998 7765568888 889999999
Q ss_pred Hhhhhhc------CcccCC---CCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHH
Q 012658 179 GWADKIQ------GLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 249 (459)
Q Consensus 179 ~~~~~~~------~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l 249 (459)
++++... +...+. +.+...+..++|+|||++|+||| | .+.++++++||++||+||+|||+.+|+++..|
T Consensus 93 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 170 (468)
T 1vlu_A 93 QGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREM 170 (468)
T ss_dssp HHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHH
Confidence 8887765 333231 12455788999999999999999 9 99999999999999999999999999999999
Q ss_pred HHHHH----H----cCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEE
Q 012658 250 SKLLH----E----AGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321 (459)
Q Consensus 250 ~~ll~----~----aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~i 321 (459)
++++. + +|+|+|+||+|+ ++++++..|..||+||+|.||||+.+|+.|++.+ +||+++|+|||||+|
T Consensus 171 ~~l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a----~kpv~lElGGk~p~i 245 (468)
T 1vlu_A 171 AKIVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSIY 245 (468)
T ss_dssp HHHHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTTBCSCCEEEE
T ss_pred HHHHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc----CCCEEeecCCccceE
Confidence 99995 8 999999999999 6767889999999999999999999999998765 699999999999999
Q ss_pred EccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhcc---CCCCCCCCcccccCCHHHHHHH
Q 012658 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV---GDPFKGGIQQGPQIDSEQFEKI 398 (459)
Q Consensus 322 V~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~v---G~p~~~~~~~Gpl~~~~~~~~i 398 (459)
|++|||+|.|++.+++++|.|+| .|++++|||||+++ |+|+++|+++++++++ |+|.+
T Consensus 246 V~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~----------------- 306 (468)
T 1vlu_A 246 LDEDADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL----------------- 306 (468)
T ss_dssp ECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-----------------
T ss_pred ECCCCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-----------------
Confidence 99999999999999999999999 99999999999999 9999999999999997 87643
Q ss_pred HHH-HHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 399 LKY-IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 399 ~~~-i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
.++ |++++ ++++||. | ++|||+ ++++|++++||+||||++|++|+|+
T Consensus 307 ~~~~i~~a~----~~~~gG~-----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~ 354 (468)
T 1vlu_A 307 KTAYFDKLN----ELGKLTE-----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTST 354 (468)
T ss_dssp HHHHHHHHH----HHTCCCH-----H--HHTTBC---------------CCCCEEEECCSH
T ss_pred hcccccccc----eeeccCC-----C--CCCcee--eCCCchhhhcCccCceEEEEEeCCH
Confidence 345 66665 4677885 4 799997 7899999999999999999999985
|
| >4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-59 Score=486.25 Aligned_cols=307 Identities=19% Similarity=0.179 Sum_probs=257.6
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCCh----hhhhh-------cchHHH
Q 012658 102 AEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPF----EQSAQ-------TEVPMT 170 (459)
Q Consensus 102 ~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~----~~a~~-------~ev~~~ 170 (459)
.+|++++++.|++||. .|+.++..+|.++|+++++.|++|.++|++++++|+||+. .++.. .|+..+
T Consensus 25 ~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~ 102 (444)
T 4ghk_A 25 DQYMTDVGRRARRASR--SIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTM 102 (444)
T ss_dssp HHHHHHHHHHHHHHHH--HHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHH
T ss_pred HHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHH
Confidence 5789999999999999 9999999999999999999999999999999999999984 34432 378899
Q ss_pred HHHHHHHHHhhhhhcCcccCC---CCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHH
Q 012658 171 TRLFRYYAGWADKIQGLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247 (459)
Q Consensus 171 ~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~ 247 (459)
++.+++++.+++.. +...+. ..+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++.
T Consensus 103 ~~~l~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 179 (444)
T 4ghk_A 103 VEGLRQVATLPDPI-GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNT 179 (444)
T ss_dssp HHHHHHHHHSCCCT-TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred HHHHHHHHhhcccc-CccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHH
Confidence 99999999887642 333331 24567889999999999999998 8 688999999999999999999999999999
Q ss_pred HHHHHH----HHcCCCCCcEEeecCCCh-hHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEE
Q 012658 248 YVSKLL----HEAGLPPGVLNIVSGYGP-TAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 322 (459)
Q Consensus 248 ~l~~ll----~~aGlP~g~v~vv~g~~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV 322 (459)
.|++++ .++|+|+|+||+|+|.+. ..+..|..||+||.|.||||+.+|+.|++.+ +||+++|||||||+||
T Consensus 180 ~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a----~~pv~lELGGk~p~IV 255 (444)
T 4ghk_A 180 ALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA----RVPMIKHLDGICHVYV 255 (444)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----CSCBCCCCCCCCEEEE
T ss_pred HHHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC----CCCEEEEcCCcCeEEE
Confidence 999997 799999999999998655 5788898999999999999999999998764 6999999999999999
Q ss_pred ccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhcc---CCCCCCCCcccccCCHHHHHHHH
Q 012658 323 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV---GDPFKGGIQQGPQIDSEQFEKIL 399 (459)
Q Consensus 323 ~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~v---G~p~~~~~~~Gpl~~~~~~~~i~ 399 (459)
++|||+|.|++.+++++|.|+| .|++++|||||+++||+|+++|+++++++++ |+|. ..
T Consensus 256 ~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~-----------------~~ 317 (444)
T 4ghk_A 256 DDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD-----------------AR 317 (444)
T ss_dssp CTTCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH-----------------HH
T ss_pred CCCCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH-----------------HH
Confidence 9999999999999999999999 9999999999999999999999999999988 6652 13
Q ss_pred HHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 400 KYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 400 ~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++|+++. + | ++ ++++|++++||+||||++|++|+|+
T Consensus 318 ~~i~~a~-~--------------G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~ 353 (444)
T 4ghk_A 318 AVLEAAG-V--------------G------PL--VDATDEDWRTEYLAPVLAIKIVDGI 353 (444)
T ss_dssp HHHHHTT-C--------------C------CC--EECCSGGGTCC---CEEEEEEESSH
T ss_pred HHHHhcc-c--------------C------cc--cCCCchhhhccccCceEEEEEeCCH
Confidence 5666542 1 2 22 3568999999999999999999985
|
| >1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-59 Score=484.18 Aligned_cols=305 Identities=20% Similarity=0.195 Sum_probs=267.6
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCCh----hhhh-------hcchHHH
Q 012658 102 AEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPF----EQSA-------QTEVPMT 170 (459)
Q Consensus 102 ~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~----~~a~-------~~ev~~~ 170 (459)
.++++++++.|++||+ .|+.++..+|.++|+++++.|++|.++|++++++|+|||. .++. ..|+..+
T Consensus 13 ~~~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~ 90 (427)
T 1o20_A 13 MDELLEKAKKVREAWD--VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEM 90 (427)
T ss_dssp -CHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHH
Confidence 4689999999999999 9999999999999999999999999999999999999985 4443 2589999
Q ss_pred HHHHHHHHHhhhhhcCcccCC---CCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHH
Q 012658 171 TRLFRYYAGWADKIQGLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247 (459)
Q Consensus 171 ~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~ 247 (459)
++.+++|+++++. .+...+. +.+...++.++|+|||++|+||| +...++++++||++||+||+|||+.+|+++.
T Consensus 91 ~~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~ 167 (427)
T 1o20_A 91 IKACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNK 167 (427)
T ss_dssp HHHHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHH
T ss_pred HHHHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHH
Confidence 9999999988765 3433331 23455788999999999999886 4788999999999999999999999999999
Q ss_pred HHHHHHH----HcCCCCCcEEeecCC-ChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEE
Q 012658 248 YVSKLLH----EAGLPPGVLNIVSGY-GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 322 (459)
Q Consensus 248 ~l~~ll~----~aGlP~g~v~vv~g~-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV 322 (459)
.|++++. ++|+|+|++|+|+|. +++.++.|..||+||+|.||||+.+|+.|++.+ .||+++|||||||+||
T Consensus 168 ~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a----~~~v~lELGGk~p~iV 243 (427)
T 1o20_A 168 AIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA----TVPVLETGVGNCHIFV 243 (427)
T ss_dssp HHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----SSCBCCCCCCCEEEEE
T ss_pred HHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc----CCCEEEecCCCceEEE
Confidence 9999998 679999999999984 466789999999999999999999999998875 5899999999999999
Q ss_pred ccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHH
Q 012658 323 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 402 (459)
Q Consensus 323 ~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i 402 (459)
++|||+|.|++.+++++|.|+| .|++++|||||+++||+|+++|++++++++++
T Consensus 244 ~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~------------------------- 297 (427)
T 1o20_A 244 DESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE------------------------- 297 (427)
T ss_dssp CTTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE-------------------------
T ss_pred eCCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe-------------------------
Confidence 9999999999999999999999 99999999999999999999999999988652
Q ss_pred HHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 403 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 403 ~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+.||... .| |+ ||| ++++|.+++||+||||++|++|+|+
T Consensus 298 ----------~~gg~~~--~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~ 336 (427)
T 1o20_A 298 ----------VRGCEKT--RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNV 336 (427)
T ss_dssp ----------EEECHHH--HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSH
T ss_pred ----------eecChhh--hh-hC-Ccc---cCCCcchhhcccccceEEEEEECCH
Confidence 2233321 12 33 996 3467899999999999999999985
|
| >4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=90.28 E-value=16 Score=36.43 Aligned_cols=166 Identities=16% Similarity=0.124 Sum_probs=96.7
Q ss_pred CCCceEEEEEccceEEEEEcCCC---chHHhhHHHHHHHHhcCCe-EEeecCCCchHHHHHHHHHHHHcCCCCCcEEeec
Q 012658 192 DGPYHVQTLHEPIGVAGQIIPWN---FPLLMFAWKVGPALACGNT-IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVS 267 (459)
Q Consensus 192 ~~~~~~~~~~~P~GVv~~i~p~n---~P~~~~~~~l~~ALaaGN~-VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~ 267 (459)
..|......+.|+--|++-.|.- ||-.. +...+||-.+|+. +|+..++..-.....+.-..+.+|+.+ +..
T Consensus 118 ~~G~~~g~~~~Pi~~VGlYVPGG~A~ypSsv-LM~aiPAkVAGV~~Iv~~tPp~~G~i~p~iL~AA~l~Gv~e----Iy~ 192 (423)
T 4gic_A 118 ADGTLLGQKITPLDRVGLYVPGGKAAYPSSV-LMNAVPAKVAGVPELIMAVPAPRGELNALVLAAAYISGVDR----VFR 192 (423)
T ss_dssp TTSCEEEEEEEECSEEEEECCCSTTCCHHHH-HHHHHHHHHHTCSEEEEECCCGGGCCCHHHHHHHHHHTCCE----EEC
T ss_pred CCCCEEEEEEEEecceeEEeeCCCCchhhHH-HHhhccHHHhCCCeEEEecCCCCCCccHHHHHHHHhcCCcE----EEE
Confidence 34667778899999999999944 55444 4558999999997 344333322112223333445566642 333
Q ss_pred CCChhHHHHHHc----CCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCc-EEE-ccCCCHHHHHHHHHHHhhc
Q 012658 268 GYGPTAGAALAS----HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSP-FIV-CEDADVDKAAELAHYALFF 341 (459)
Q Consensus 268 g~~~~~~~~L~~----~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p-~iV-~~dADld~aa~~i~~~~~~ 341 (459)
-.|.+.-.+|.- -|+||+|+=.|+.=+..+=.+. . +..-+=+. .|.+= +|| ++++|.+..+..++.-+=+
T Consensus 193 vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v--~-g~VgIDm~-AGPSEilViAD~~a~p~~vAaDLlsQAEH 268 (423)
T 4gic_A 193 IGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLV--F-GQVGIDMV-AGPSEILVISDGRTDPDWIAMDLFSQAEH 268 (423)
T ss_dssp CCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHH--B-TTBEECCC-CCCCEEEEEECSCSCHHHHHHHHHHHHTT
T ss_pred cCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHh--c-CCcCcccc-cccceEEEEeCCCCCHHHHHHHHHHhhcc
Confidence 335555555554 5789999999997664321111 1 22222222 33333 333 4458999988887766544
Q ss_pred cCCCccccCceeEeeCcchHHHHHHHHHHHHh
Q 012658 342 NQGQCCCAGSRTFVHESVYDQFVEKANALAMK 373 (459)
Q Consensus 342 ~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~ 373 (459)
... .+.++|..+ ++|.++..+++.+
T Consensus 269 d~~-----a~~iLvT~s--~~la~~V~~~i~~ 293 (423)
T 4gic_A 269 DED-----AQAILISPD--AAHLEAVQASIER 293 (423)
T ss_dssp CTT-----CEEEEEESC--HHHHHHHHHHHHH
T ss_pred CCC-----CeEEEEeCc--HHHHHHHHHHHHH
Confidence 332 345777766 5566666555544
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 459 | ||||
| d1bxsa_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-141 | |
| d1o04a_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-140 | |
| d1a4sa_ | 503 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-113 | |
| d1wnda_ | 474 | c.82.1.1 (A:) Putative betaine aldehyde dehydrogen | 1e-98 | |
| d1euha_ | 474 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 6e-79 | |
| d1uzba_ | 516 | c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen | 2e-73 | |
| d1ky8a_ | 499 | c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3 | 3e-61 | |
| d1ad3a_ | 446 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 2e-58 | |
| d1o20a_ | 414 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 6e-35 | |
| d1ez0a_ | 504 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 2e-34 | |
| d1vlua_ | 436 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 3e-15 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Score = 410 bits (1056), Expect = e-141
Identities = 210/381 (55%), Positives = 269/381 (70%), Gaps = 2/381 (0%)
Query: 56 PITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKA 115
P+T + YT++ IN ++ S SGK FP +P T + + V EG+ EDV++AV AAR+A
Sbjct: 5 PLTNL-QFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQA 63
Query: 116 FDEGP-WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLF 174
F G W M A ER +++ + ADL+ER +A +E + GK F + ++ +
Sbjct: 64 FQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTL 123
Query: 175 RYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTI 234
RY AGWADKIQG T P DG + T EP+GV GQIIPWNFPLLMF WK+GPAL+CGNT+
Sbjct: 124 RYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTV 183
Query: 235 VLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTT 294
V+K AEQTPL+AL++ L+ EAG PPGV+NIV GYGPTAGAA++SHM+VDK+AFTGST
Sbjct: 184 VVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEV 243
Query: 295 GKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTF 354
GK++ + A KSNLK V+LELGGKSP IV DAD+D A E AH +F++QGQCC A SR F
Sbjct: 244 GKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLF 303
Query: 355 VHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLET 414
V ES+YD+FV ++ A K V+G+P G+ QGPQID EQ+EKIL I SG GAKLE
Sbjct: 304 VEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLEC 363
Query: 415 GGERLGAKGYYIKPTVFTGVK 435
GG G KGY+I+PTVF+ V
Sbjct: 364 GGGPWGNKGYFIQPTVFSDVT 384
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Score = 408 bits (1049), Expect = e-140
Identities = 225/385 (58%), Positives = 277/385 (71%), Gaps = 2/385 (0%)
Query: 52 AAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSA 111
A P P +V Q+ IN ++ D+ S KTFPT++P TG+VI VAEG+ EDV++AV A
Sbjct: 1 AVPAPNQQP-EVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKA 59
Query: 112 ARKAFDEGP-WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMT 170
AR AF G W RM A R +++ R ADL+ER +AALET DNGKP+ S ++ M
Sbjct: 60 ARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMV 119
Query: 171 TRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALAC 230
+ RYYAGWADK G T P DG + T HEP+GV GQIIPWNFPLLM AWK+GPALA
Sbjct: 120 LKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALAT 179
Query: 231 GNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTG 290
GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK+AFTG
Sbjct: 180 GNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTG 239
Query: 291 STTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAG 350
ST G+++ A SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQC CAG
Sbjct: 240 STEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAG 299
Query: 351 SRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGA 410
SRTFV E +YD+FVE++ A A RVVG+PF +QGPQ+D QF+KIL YI +G GA
Sbjct: 300 SRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGA 359
Query: 411 KLETGGERLGAKGYYIKPTVFTGVK 435
KL GG +GY+I+PTVF V+
Sbjct: 360 KLLCGGGIAADRGYFIQPTVFGDVQ 384
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Score = 341 bits (876), Expect = e-113
Identities = 135/385 (35%), Positives = 205/385 (53%), Gaps = 12/385 (3%)
Query: 58 TPPVKVDYTQLLINGQFVDSASGKTF-PTLDPRTGDVITHVAEGEAEDVNRAVSAARKAF 116
T V V G+ + S G T P +P TG V+ + AE+V++AV +A+ A+
Sbjct: 12 TGSVVVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAY 71
Query: 117 DEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRY 176
+ W +M ERS+++L A ++ D IA LE +N A+ ++ + Y
Sbjct: 72 LK--WSKMAGIERSRVMLEAARIIRERRDNIAKLEVINN-GKTITEAEYDIDAAWQCIEY 128
Query: 177 YAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVL 236
YAG A + G G T EP+GV I+ WN+P ++ AWK PALACGN +V
Sbjct: 129 YAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVF 188
Query: 237 KTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGK 296
K + TP++ + ++++ HEAG+P G++N+V G G G+ L H V K++FTGS TGK
Sbjct: 189 KPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGK 247
Query: 297 IVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVH 356
V++++AK +K VTLELGGKSP ++ +D +++ A A A F QGQ C G+R FV
Sbjct: 248 KVMEMSAK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQ 306
Query: 357 ESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG 416
+ QF+E+ VVGDP + G I Q +K+L ++ GA++ GG
Sbjct: 307 REIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGG 366
Query: 417 ERLG------AKGYYIKPTVFTGVK 435
E L GY++ P V +
Sbjct: 367 EPLTPSDPKLKNGYFMSPCVLDNCR 391
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Score = 302 bits (773), Expect = 1e-98
Identities = 140/388 (36%), Positives = 205/388 (52%), Gaps = 7/388 (1%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+LLING+ V G+ P +P TGDV+ +AE AE V+ AV AA AF E W + T
Sbjct: 3 HKLLINGELVS-GEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAE--WGQTT 59
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
R++ +L+ AD++E + A LE+ + GKP + E+P +FR++AG A +
Sbjct: 60 PKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLN 119
Query: 186 GLTAPADGPYH-VQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
GL A H +P+GV I PWN+PL+M AWK+ PALA GN +VLK +E TPL
Sbjct: 120 GLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPL 179
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
+AL +++L + P GV+NI+ G G T G L H +V ++ TGS TG+ ++
Sbjct: 180 TALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIIS-HTA 237
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
S++K +ELGGK+P IV +DAD++ E ++N GQ C A R + + +YD V
Sbjct: 238 SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLV 297
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV-DGGAKLETGGERLGAKG 423
EK A G P + GP E++ K + G K+ TGGE+ G
Sbjct: 298 EKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNG 357
Query: 424 YYIKPTVFTGVKVLILISPASISPNILH 451
YY PT+ G I + ++
Sbjct: 358 YYYAPTLLAGALQDDAIVQKEVFGPVVS 385
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Score = 251 bits (641), Expect = 6e-79
Identities = 104/374 (27%), Positives = 168/374 (44%), Gaps = 16/374 (4%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
+ +NG++ S +P +G + V E+V+ ++A+KA W ++
Sbjct: 5 KNYVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPA--WRALSY 60
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRL-----FRYYAGWA 181
ER+ + + AD+L R ++I A+ + + K ++ + V +
Sbjct: 61 IERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGE 120
Query: 182 DKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
G A EP+G+ I P+N+P+ + K+ PAL GN I K Q
Sbjct: 121 VLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQ 180
Query: 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
+S L +++ EAGLP GV N ++G G G + H V+ + FTGST G+ + ++
Sbjct: 181 GSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKM 240
Query: 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
A ++P+ LELGGK IV EDAD++ A+ F GQ C A R V ESV D
Sbjct: 241 AG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVAD 297
Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 421
+ VEK + + + P ID++ + + I D GA T +R
Sbjct: 298 ELVEK-IREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKR--- 353
Query: 422 KGYYIKPTVFTGVK 435
+G I P +F V
Sbjct: 354 EGNLICPILFDKVT 367
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 237 bits (606), Expect = 2e-73
Identities = 122/395 (30%), Positives = 189/395 (47%), Gaps = 16/395 (4%)
Query: 49 AAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPR-TGDVITHVAEGEAEDVNR 107
A A + Y L I G++VD+ + +L+P +V+ A+ +
Sbjct: 22 AMREALRRVREEFGRHY-PLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEA 78
Query: 108 AVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEV 167
A+ AA KAF W +RS+++L+ A L+ R E+ A ++ GK + ++ +V
Sbjct: 79 ALEAAWKAFKT--WKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEA-SADV 135
Query: 168 PMTTRLFRYYAGWADKIQGLTAPADGPY--HVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225
YYA A + + ++ + P+G I PWNFP+ +F +
Sbjct: 136 AEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIV 195
Query: 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDK 285
+A GNT++ K AE + V ++ HEAG PPGV+N + G G GA L H +
Sbjct: 196 GPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRF 255
Query: 286 LAFTGSTTTGKIVLQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 340
+ FTGS G + + A + + K +E GGK+ IV E AD D AAE + +
Sbjct: 256 INFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAY 315
Query: 341 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 400
QGQ C A SR + + Y+ +E+ A + VG P + GP + +EQ K+L
Sbjct: 316 GFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLS 374
Query: 401 YIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVK 435
YI G + G + GG+RL +GY+I PTVFT V
Sbjct: 375 YIEIGKNEGQLV-LGGKRLEGEGYFIAPTVFTEVP 408
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Score = 205 bits (522), Expect = 3e-61
Identities = 98/353 (27%), Positives = 149/353 (42%), Gaps = 13/353 (3%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
+ G++ S G+ P I V E+V R + K M
Sbjct: 18 PSYLAGEWGGS--GQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWS-ARDMPG 74
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
ER ++ + AD++ER+ D A + + GKP A EV R KI G
Sbjct: 75 TERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSA-AVGEVKAAVDRLRLAELDLKKIGG 133
Query: 187 LTAPADGPYHVQ-----TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
P D Y EP+GV I P+N+PL K+ + GN +V+K +
Sbjct: 134 DYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSIS 193
Query: 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
PL A K L +AG PP + +++ G A + + V ++FTGST G+ V+++
Sbjct: 194 DPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEK-IVADDRVAAVSFTGSTEVGERVVKV 252
Query: 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
+K +ELGG P IV EDAD+D AA+ ++ GQ C A VY
Sbjct: 253 GG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYG 309
Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLET 414
+ VE+ VGDP + GP I ++++ I V+ G ++
Sbjct: 310 KLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLA 362
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 196 bits (498), Expect = 2e-58
Identities = 85/335 (25%), Positives = 128/335 (38%), Gaps = 17/335 (5%)
Query: 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164
++ V AR+AF+ + R + + ++ + I+ D GK S
Sbjct: 2 ISDTVKRAREAFNS--GKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYY 59
Query: 165 TEVPMTTRLFRYYA----GWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220
EV WA+ + EP+GV I WN+P +
Sbjct: 60 EEVAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLT 119
Query: 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 280
+ A+A GN ++LK +E + A ++ L+ + + G
Sbjct: 120 IQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQ---YMDQNLYLVVKGGVPETTELLK 176
Query: 281 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 340
D + +TGST GKIV+ AAK +L PVTLELGGKSP V +D D+D A + F
Sbjct: 177 ERFDHIMYTGSTAVGKIVMAAAAK-HLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF 235
Query: 341 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 400
N GQ C A S+ +Q VEK G+ K G I+ F+++
Sbjct: 236 MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLK-DFYGEDAKQSRDYGRIINDRHFQRVKG 294
Query: 401 YIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVK 435
I + G YI PT+ V
Sbjct: 295 LIDNQK------VAHGGTWDQSSRYIAPTILVDVD 323
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Score = 132 bits (332), Expect = 6e-35
Identities = 48/308 (15%), Positives = 90/308 (29%), Gaps = 15/308 (4%)
Query: 103 EDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162
+++ R+A+D T E++K I + A+ L+ EI D K E+
Sbjct: 1 DELLEKAKKVREAWDV--LRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERG 58
Query: 163 -----------AQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQII 211
+ + G D + + ++ + + I
Sbjct: 59 VKESLVDRLALNDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGI 118
Query: 212 PWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSG-YG 270
+ + AL GNTI+L+ S + + EA +
Sbjct: 119 IYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIE 178
Query: 271 PTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDK 330
T + + + + + G ++ + PV G V E AD+ K
Sbjct: 179 NTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKK 238
Query: 331 AAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQI 390
A + A C A + VHE + +F+ K V ++
Sbjct: 239 AVPVIINAKTQR-PGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCEKTREIVPD 297
Query: 391 DSEQFEKI 398
E
Sbjct: 298 VVPATEDD 305
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Score = 132 bits (333), Expect = 2e-34
Identities = 62/343 (18%), Positives = 112/343 (32%), Gaps = 22/343 (6%)
Query: 79 SGKTFPTLDPRTGDVI-THVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFA 137
+ F + TG+ + +VN+A +AA K + + R+ +R+ ++ A
Sbjct: 1 TDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARD--FRRLNNSKRASLLRTIA 58
Query: 138 DLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD----- 192
LE +D+I A + P + E+ T R +A + A D
Sbjct: 59 SELEARSDDIIARAHLETALPEVR-LTGEIARTANQLRLFADVVNSGSYHQAILDTPNPT 117
Query: 193 ----GPYHVQTLHEPIGVAGQIIPWNFPL--LMFAWKVGPALACGNTIVLKTAEQTPLS- 245
++ +G NFPL ALA G +++K P +
Sbjct: 118 RAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTS 177
Query: 246 ---ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
A + + L + LP + ++ G G AL SH E+ + FTGS G+ + LA
Sbjct: 178 QIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLA 237
Query: 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAEL---AHYALFFNQGQCCCAGSRTFVHESV 359
+ G + + A+L ++ GQ C F +
Sbjct: 238 HERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTP 297
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 402
Q + +++ + I
Sbjct: 298 ETQAFIETAQSLIRQQSPSTLLTPGIRDSYQSQVVSRGSDDGI 340
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 75.3 bits (184), Expect = 3e-15
Identities = 42/294 (14%), Positives = 91/294 (30%), Gaps = 34/294 (11%)
Query: 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164
+ ARKA + ++ RS I+ + D L+ + I N + +
Sbjct: 5 SQQIAKNARKAGNI--LKTISNEGRSDILYKIHDALKANAHAIEE----ANKIDLAVAKE 58
Query: 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQ--------------- 209
T + + L R DK + + G V L +P+G
Sbjct: 59 TGLA-DSLLKRLDLFKGDKFEVM---LQGIKDVAELEDPVGKVKMARELDDGLTLYQVTA 114
Query: 210 -----IIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLL---HEAGLPPG 261
++ + + A ++ GN +LK +++ + ++K++
Sbjct: 115 PVGVLLVIFESRPEVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSET 174
Query: 262 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321
+ + S ++ ++ D+ +++ + PV G
Sbjct: 175 GVPVGSVQLIETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTTKIPVLGHADGICSIY 234
Query: 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 375
+ EDAD+ KA ++ A C ++ + N V
Sbjct: 235 LDEDADLIKAKRISLDAKTNYPAGCNA-METLLINPKFSKWWEVLENLTLEGGV 287
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 459 | |||
| d1bxsa_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Sheep (O | 100.0 | |
| d1o04a_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Human (H | 100.0 | |
| d1a4sa_ | 503 | Aldehyde reductase (dehydrogenase), ALDH {Baltic c | 100.0 | |
| d1wnda_ | 474 | Putative betaine aldehyde dehydrogenase YdcW {Esch | 100.0 | |
| d1uzba_ | 516 | 1-pyrroline-5-carboxylate dehydrogenase {Thermus t | 100.0 | |
| d1ky8a_ | 499 | Non-phosphorylating glyceraldehyde-3-phosphate deh | 100.0 | |
| d1euha_ | 474 | Aldehyde reductase (dehydrogenase), ALDH {Streptoc | 100.0 | |
| d1ad3a_ | 446 | Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat | 100.0 | |
| d1ez0a_ | 504 | Aldehyde reductase (dehydrogenase), ALDH {Vibrio h | 100.0 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 100.0 | |
| d1vlua_ | 436 | Gamma-glutamyl phosphate reductase {Baker's yeast | 100.0 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Probab=100.00 E-value=3.4e-88 Score=709.05 Aligned_cols=400 Identities=53% Similarity=0.905 Sum_probs=384.1
Q ss_pred CCCCCCccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCC-CCCCCCHHHHHHHHHHHH
Q 012658 59 PPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFA 137 (459)
Q Consensus 59 ~~~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g-~W~~~~~~~R~~iL~~~a 137 (459)
...+++++++||||+|+++.++++++++||+||++|++++.++.+|+++|+++|++||+.+ .|++++.++|.++|++++
T Consensus 7 ~~~~~~~~~~yI~G~w~~~~s~~~~~v~nP~t~e~i~~v~~a~~~dvd~Av~aA~~Af~a~~~W~~~s~~eR~~iL~kia 86 (494)
T d1bxsa_ 7 TNLQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLA 86 (494)
T ss_dssp SSCCCCCCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHH
T ss_pred CCCCcCcCCEEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHH
Confidence 3466778899999999998889999999999999999999999999999999999999742 599999999999999999
Q ss_pred HHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchH
Q 012658 138 DLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPL 217 (459)
Q Consensus 138 ~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~ 217 (459)
+.|++|+++|++++++|+|||+.++...|+..+++.+++++.+.++..+...+...+...++.++|+|||++|+|||||+
T Consensus 87 ~~L~~~~eela~l~~~E~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~ 166 (494)
T d1bxsa_ 87 DLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPL 166 (494)
T ss_dssp HHHHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHH
T ss_pred HHHHhCHHHHHHHHHHhcCCchhhhhhhhhhhhhHHHHHHhhhhhhhcceeecCCCCceeEEEEccEEEEEEEeCccchh
Confidence 99999999999999999999998877678999999999999999988888778777888999999999999999999999
Q ss_pred HhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHH
Q 012658 218 LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 297 (459)
Q Consensus 218 ~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~ 297 (459)
...++++++||++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|+++++++.|++||+|++|.||||+.+|+.
T Consensus 167 ~~~~~~i~~ALaaGN~VVlKpse~tp~~a~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~p~v~~i~fTGS~~~g~~ 246 (494)
T d1bxsa_ 167 LMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKL 246 (494)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHcCCeEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEecCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988889999999999999999999999999
Q ss_pred HHHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccC
Q 012658 298 VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 377 (459)
Q Consensus 298 i~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG 377 (459)
|++.+++.++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 247 i~~~aa~~~~~~~~lElGG~np~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~~~d~f~~~l~~~~~~~~~g 326 (494)
T d1bxsa_ 247 IKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLG 326 (494)
T ss_dssp HHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBS
T ss_pred HHHHhcccCCCeEEEEcCCcCcEEECcCcchhHhHHHHHHHHhcCCCcccccceEEecccchhHHHHHHHHhhhhheeee
Confidence 99998876799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCC
Q 012658 378 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGEN 457 (459)
Q Consensus 378 ~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~ 457 (459)
+|.++++++||++++.+++++.++|++++++||++++||...+..|+|++|||+.+++++|.+++||+||||++|++|+|
T Consensus 327 ~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FGPvl~v~~~~~ 406 (494)
T d1bxsa_ 327 NPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKS 406 (494)
T ss_dssp CTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECC
T ss_pred ccCCCCCcCCCcCCHHHHHHHHHHHHHHHHcCCEEEeCCCccCCCceeEcCEEEeCCCCCcHHHhccccCceEEEEEECC
Confidence 99999999999999999999999999999999999999987778899999999999999999999999999999999998
Q ss_pred C
Q 012658 458 F 458 (459)
Q Consensus 458 ~ 458 (459)
+
T Consensus 407 ~ 407 (494)
T d1bxsa_ 407 L 407 (494)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00 E-value=1.2e-87 Score=704.43 Aligned_cols=398 Identities=57% Similarity=0.937 Sum_probs=381.9
Q ss_pred CCCCccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCC-CCCCCCHHHHHHHHHHHHHH
Q 012658 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADL 139 (459)
Q Consensus 61 ~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g-~W~~~~~~~R~~iL~~~a~~ 139 (459)
.++.++++||||+|+++.++++++++||.||+++++++.++.+|+++|+++|++||+.+ .|++++..+|.++|+++++.
T Consensus 9 p~~~~~~~~I~G~w~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~Af~~~~~W~~~~~~eRa~iL~~~a~~ 88 (494)
T d1o04a_ 9 PEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADL 88 (494)
T ss_dssp CCCCCCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHH
T ss_pred CccccCCeEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHH
Confidence 44777899999999998889999999999999999999999999999999999999632 59999999999999999999
Q ss_pred HHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHh
Q 012658 140 LERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLM 219 (459)
Q Consensus 140 l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 219 (459)
|++|.++|++++++|+|||+.++...|+..+++.++|++.++++..+...+...+...++.++|+|||++|+|||||+..
T Consensus 89 l~~~~eela~~~~~E~GK~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~ 168 (494)
T d1o04a_ 89 IERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLM 168 (494)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HHHhHHHHHHHHHHHhCcchhhhhhhHHHHHHHHHHHHHHHHHHhcCceeccCCCceeEEEEecccEEEEECCcccHHHH
Confidence 99999999999999999999988777999999999999999998888877777778889999999999999999999999
Q ss_pred hHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHH
Q 012658 220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299 (459)
Q Consensus 220 ~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 299 (459)
.++++++||++||+||+|||+.+|.++.+|++++.++|+|+|++|+|+|++.+.++.|+.||+|+.|.||||+++|+.|+
T Consensus 169 ~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~l~~~aglP~gv~~~v~g~~~~~g~~L~~~~~v~~v~fTGS~~~g~~i~ 248 (494)
T d1o04a_ 169 QAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQ 248 (494)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEeCCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHhhCCCcCEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCC
Q 012658 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379 (459)
Q Consensus 300 ~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p 379 (459)
+.++.+++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++++|||++++|+|+++|++++.++++|+|
T Consensus 249 ~~aa~~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p 328 (494)
T d1o04a_ 249 VAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNP 328 (494)
T ss_dssp HHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCT
T ss_pred HHhhccCCCeEEEECCCcCcEEEccCccHHHHHHhhhhhccccCcccccccccccccchhhHHHHHHHHHHhhheeecCc
Confidence 88875589999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 380 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 380 ~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
.++++++||++++.+++++.++|++++++||++++||....+.|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 329 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FGPvl~v~~~~~~ 407 (494)
T d1o04a_ 329 FDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTI 407 (494)
T ss_dssp TSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred ccccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCceEcCEEEeCCCCCCHHHhccccCceEEEEEeCCH
Confidence 9999999999999999999999999999999999999877778999999999999999999999999999999999985
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Probab=100.00 E-value=4.6e-84 Score=678.14 Aligned_cols=396 Identities=35% Similarity=0.621 Sum_probs=376.0
Q ss_pred CCCCCCCccCceecCEeeeCCCCCee-eeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 012658 58 TPPVKVDYTQLLINGQFVDSASGKTF-PTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRF 136 (459)
Q Consensus 58 ~~~~~~~~~~~~I~G~~~~~~~~~~~-~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~ 136 (459)
..+..+....+||||+|+++.+|+++ +++||+||++|++++.++.+|+++|+++|++||+ .|++++..+|.++|+++
T Consensus 12 ~~~~~~~~~~n~I~G~~v~~~~g~~~~~V~nP~tge~i~~v~~a~~~dV~~AV~aA~~A~~--~W~~~s~~eR~~iL~~~ 89 (503)
T d1a4sa_ 12 TGSVVVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL--KWSKMAGIERSRVMLEA 89 (503)
T ss_dssp TTTCCCCSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHH
T ss_pred CCceeecCCCeEECCEEeCCCCCCeeeeeecCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHH
Confidence 34456666678999999998888766 6999999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCch
Q 012658 137 ADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFP 216 (459)
Q Consensus 137 a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P 216 (459)
++.|++|+++|++++++|+|||+.++. .|+..+++.++|++.+.++..+...+.+.+...++.++|+|||++|+|||||
T Consensus 90 a~~L~~~~eela~~~~~etGkp~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~NfP 168 (503)
T d1a4sa_ 90 ARIIRERRDNIAKLEVINNGKTITEAE-YDIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYP 168 (503)
T ss_dssp HHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECCSSSH
T ss_pred HHHHHHhHHHHHHHHHHhhhhcchhhh-hhhhhhhhcccccccccccccccccccCCCcccccccccceeeecccCCCCh
Confidence 999999999999999999999999976 5999999999999999988877666666677889999999999999999999
Q ss_pred HHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHH
Q 012658 217 LLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGK 296 (459)
Q Consensus 217 ~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~ 296 (459)
+...++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+| +.+.+..|++||+|++|.||||+++|+
T Consensus 169 ~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~e~g~~L~~~~~v~~V~fTGS~~~G~ 247 (503)
T d1a4sa_ 169 FMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGK 247 (503)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCCCeEEEecC-CHHHHHHHHhCCCcCEEEEeCCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999 678999999999999999999999999
Q ss_pred HHHHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhcc
Q 012658 297 IVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 376 (459)
Q Consensus 297 ~i~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~v 376 (459)
.|++.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++++|++++.+.++++++
T Consensus 248 ~i~~~aa~-~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~ri~v~~~~~~~~~~~l~~~~~~~~~ 326 (503)
T d1a4sa_ 248 KVMEMSAK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVV 326 (503)
T ss_dssp HHHHHHHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCB
T ss_pred HHHHHhhh-cCCcEEEECCCcCcEEECCCccHHHHhhhhhcchhccCCCccccCcceEEEechhhhHHHHHHHhhhhEee
Confidence 99999887 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCccc------CCCCceEecEEEeeCCCCCCCcCcCCCcceE
Q 012658 377 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL------GAKGYYIKPTVFTGVKVLILISPASISPNIL 450 (459)
Q Consensus 377 G~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~------~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl 450 (459)
|+|.++.+++||++++.+++++.+++++++++||++++||... ..+|+|++|||+.+++++|++++||+||||+
T Consensus 327 g~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~Ga~v~~gg~~~~~~~~~~~~G~~~~Ptvl~~~~~~~~~~~~E~FgPvl 406 (503)
T d1a4sa_ 327 GDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVM 406 (503)
T ss_dssp SCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEE
T ss_pred ccccccccccccccCHHHHHHHHHHHHHHHHcCCEEEECCcccCCCCcccCCceEEcCEEEeCCCCCCHHHhccccCceE
Confidence 9999999999999999999999999999999999999999643 2468999999999999999999999999999
Q ss_pred EEEecCCC
Q 012658 451 HTFNGENF 458 (459)
Q Consensus 451 ~v~~~~~~ 458 (459)
+|++|+|+
T Consensus 407 ~v~~~~~~ 414 (503)
T d1a4sa_ 407 SVLPFDTE 414 (503)
T ss_dssp EEEEECCH
T ss_pred EEEEcCCH
Confidence 99999985
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.4e-82 Score=661.50 Aligned_cols=389 Identities=35% Similarity=0.596 Sum_probs=362.1
Q ss_pred ccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 012658 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (459)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~ 144 (459)
..++||||+|+++ +|++++++||+||++|++++.++.+|+++|++.|++||+ .|++++..+|.++|+++++.|+++.
T Consensus 2 ~~~l~I~G~~v~~-~g~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~ 78 (474)
T d1wnda_ 2 QHKLLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA--EWGQTTPKVRAECLLKLADVIEENG 78 (474)
T ss_dssp CCCEEETTEEECC-CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCccEECCeEeCC-CCCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhCH
Confidence 3589999999976 779999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccC-CCCCceEEEEEccceEEEEEcCCCchHHhhHHH
Q 012658 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (459)
Q Consensus 145 ~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (459)
++|++++++|+|||+.++...++..+...++|++...........+ ...+...++.++|+|||++|+|||||+...+++
T Consensus 79 ~ela~~~~~e~Gk~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~ 158 (474)
T d1wnda_ 79 QVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWK 158 (474)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCChhHhhhcccccccccccccccccccccccccccccCCcceEEEEecccceEEEeecchHhhhhhcc
Confidence 9999999999999999987767777777777777665544333222 224677889999999999999999999999999
Q ss_pred HHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHH
Q 012658 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (459)
Q Consensus 224 l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a 303 (459)
+++||++||+||+|||+.+|+++..+++++++ ++|+|++|+|+|++.++++.|++||+|+.|.||||+++|+.|.+.++
T Consensus 159 ~a~ALaaGN~Vv~Kps~~~p~~~~~~~~l~~~-~lP~gv~~~v~g~~~~~g~~L~~~p~i~~v~fTGS~~~G~~i~~~a~ 237 (474)
T d1wnda_ 159 LAPALAAGNCVVLKPSEITPLTALKLAELAKD-IFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTA 237 (474)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHTT-TSCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHG
T ss_pred HHHHHHhCCCEEEeCCCcCcHHHHHHHHHHHH-hCCCCcEEEEeCCcHHHHHHHHhCCCcCEEEeeCCHHHHHHHHHhhh
Confidence 99999999999999999999999999999977 59999999999988899999999999999999999999999999988
Q ss_pred hcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCC
Q 012658 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (459)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~ 383 (459)
+ ++||+++|||||||+||++|||++.|++.+++++|+|+||.|++++|+|||+++||+|+++|+++++++++|+|.+++
T Consensus 238 ~-~~k~~~lElgG~~p~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~~~~~l~~~~~~l~~G~~~~~~ 316 (474)
T d1wnda_ 238 S-SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDES 316 (474)
T ss_dssp G-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTT
T ss_pred c-CCCeEEEEcCCCCceEEcCchhhhhhhhhhhhhcccCCCcccccccccccccccchhhhhhhHHHHHhhccCCcCCCC
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHhCCCe-EEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 384 IQQGPQIDSEQFEKILKYIRSGVDGGAK-LETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 384 ~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~-v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++||+++..+++++.+++++++++|+. ++.|+....+.|+|++|||+.+++++|.+++||+||||++|++|+|+
T Consensus 317 ~~~Gpli~~~~~~~~~~~i~~a~~~ga~~v~~G~~~~~~~g~~~~Ptil~~~~~~~~~~~eE~FGPVl~v~~~~~~ 392 (474)
T d1wnda_ 317 TELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNE 392 (474)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred ceecccccccccchHHHHHHHHHHCCCeEEEeCCcccCCCceEEeeeEeecccccccceeecccCCeEEEEEeCCH
Confidence 9999999999999999999999999985 55666666678999999999999999999999999999999999985
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1.2e-80 Score=654.66 Aligned_cols=387 Identities=32% Similarity=0.514 Sum_probs=361.5
Q ss_pred ccCceecCEeeeCCCCCeeeeeCCC-CCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHc
Q 012658 65 YTQLLINGQFVDSASGKTFPTLDPR-TGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (459)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~-tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~ 143 (459)
+.++||||+|+.+ ++++.++||. ||++|++++.++.+|+++|+++|++||+ .|+++|.++|.++|+++++.|++|
T Consensus 37 ~~~l~I~G~~v~s--~~~~~~~nP~~tge~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~s~~~R~~iL~~~a~~l~~~ 112 (516)
T d1uzba_ 37 HYPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWKDWPQEDRSRLLLKAAALMRRR 112 (516)
T ss_dssp EECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred CCCeEEcCEEECC--CCCeEEeCCCCCCeEEEEEcCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHH
Confidence 4599999999974 5689999996 7999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccC--CCCCceEEEEEccceEEEEEcCCCchHHhhH
Q 012658 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP--ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221 (459)
Q Consensus 144 ~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 221 (459)
.++|++++++|+|||+.++. .|+..+++.+++++..++...+.... ...+...+..++|+|||++|+|||||+...+
T Consensus 113 ~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~PwN~Pl~~~~ 191 (516)
T d1uzba_ 113 KRELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFT 191 (516)
T ss_dssp HHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHH
T ss_pred HHHHHHHHHHHhCCCccccc-hhHHHHHHHHHHHHHHHHhhhhcccccccccccceeEEeeccCcccccccccccccccc
Confidence 99999999999999999875 59999999999999998887654332 2235667888999999999999999999999
Q ss_pred HHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHH
Q 012658 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (459)
Q Consensus 222 ~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 301 (459)
+++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|.+.+.++.|+.||+|+.|.||||+.+|+.|++.
T Consensus 192 ~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~hp~v~~I~FTGs~~~G~~i~~~ 271 (516)
T d1uzba_ 192 GMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEA 271 (516)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred ccccchhhhcccccccccchhHHHHHHHHHHHHHhCcCcCeEEEccCChHHHHHHHHhCCCcCEEecccchhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888999999999999999999999999999998
Q ss_pred HHh-----cCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhcc
Q 012658 302 AAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 376 (459)
Q Consensus 302 ~a~-----~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~v 376 (459)
++. .++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|++++.++++++++
T Consensus 272 aa~~~~~~~~~k~v~lElgG~~p~iV~~dAd~~~aa~~i~~~~~~~~GQ~C~a~~ri~v~~~i~d~~~~~~~~~~~~l~~ 351 (516)
T d1uzba_ 272 AGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSV 351 (516)
T ss_dssp HTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCB
T ss_pred HhhcccchhhhhhheeeccCccceeeecchhHHHHHHHHhhhhcccCCCcccccCccccccccccchhhHHHHHHHhccc
Confidence 872 368999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecC
Q 012658 377 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGE 456 (459)
Q Consensus 377 G~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~ 456 (459)
| |.++++++||+++..+++++.++|++++++|+.+ +||.....+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 352 g-~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v-~~g~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~ 429 (516)
T d1uzba_ 352 G-PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLV-LGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVK 429 (516)
T ss_dssp S-CGGGCCSBCCCSCHHHHHHHHHHHHHHTTTSEEE-ECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred C-CCcccCccccccCHHHHHHHHHHHHHHHHCCCEE-ECCCcCCCCCceECCEEEecCCCCchhhcCCCcCceEEEEEeC
Confidence 9 6688999999999999999999999999999765 5666556679999999999999999999999999999999999
Q ss_pred CC
Q 012658 457 NF 458 (459)
Q Consensus 457 ~~ 458 (459)
|+
T Consensus 430 d~ 431 (516)
T d1uzba_ 430 DF 431 (516)
T ss_dssp SH
T ss_pred CH
Confidence 85
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Probab=100.00 E-value=2.8e-74 Score=604.12 Aligned_cols=391 Identities=26% Similarity=0.386 Sum_probs=355.4
Q ss_pred CCCCCCCccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 012658 58 TPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFA 137 (459)
Q Consensus 58 ~~~~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a 137 (459)
+..-.+...++||||+|+. ++++++++||.||+++++++.++.+|+++|++.|++++.. .|+++|..+|.++|++++
T Consensus 9 ~~~~~~~~~~~~I~G~~~~--sg~~~~v~~P~t~~~i~~v~~a~~~dv~~Av~~A~~a~~~-~w~~~~~~~R~~iL~~~a 85 (499)
T d1ky8a_ 9 KEKGGVPVYPSYLAGEWGG--SGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRW-SARDMPGTERLAVLRKAA 85 (499)
T ss_dssp EEETTEEEECEECSSSEEC--CSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHH-HHHHSCHHHHHHHHHHHH
T ss_pred HhcCCCCCCCCEECCeECC--CCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHhchh-hhhcCCHHHHHHHHHHHH
Confidence 3334455679999999985 6789999999999999999999999999999999877652 599999999999999999
Q ss_pred HHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccC-----CCCCceEEEEEccceEEEEEcC
Q 012658 138 DLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-----ADGPYHVQTLHEPIGVAGQIIP 212 (459)
Q Consensus 138 ~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~-----~~~~~~~~~~~~P~GVv~~i~p 212 (459)
+.|++|.++|++++++|+|||..++. .|+..+++.++|++...++..+.... ...+...+..++|+|||++|+|
T Consensus 86 ~~l~~~~~~la~~~~~etGk~~~~a~-~Ev~~~i~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p 164 (499)
T d1ky8a_ 86 DIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITP 164 (499)
T ss_dssp HHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHGGGGGGTTTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECC
T ss_pred HHHHHhHHHHHHHHHHHhCCCHHHHh-hhhhcccccccchhhhhhhhhhceeccccccccccccceeeeecccccccccc
Confidence 99999999999999999999999875 59999999999999988876554321 1235677899999999999999
Q ss_pred CCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCCh
Q 012658 213 WNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGST 292 (459)
Q Consensus 213 ~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~ 292 (459)
||||+.+.++++++||++||+||+|||+.+|.++..+++++.++|+|.++++++.+.+ +.+..|..|+.|+.+.||||+
T Consensus 165 ~N~P~~~~~~~~~~ALaaGn~Vi~Kps~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~-~~~~~l~~~~~i~~v~ftGs~ 243 (499)
T d1ky8a_ 165 FNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGST 243 (499)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCCCG-GGGHHHHHCTTCCEEEEESCH
T ss_pred ccccchhhhhcchhhhcccccccccccccchhhhhhhccccccccccceeeecccCCh-HHHHHHhhccceeEEEeeccc
Confidence 9999999999999999999999999999999999999999999999999999999865 457889999999999999999
Q ss_pred HHHHHHHHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHH
Q 012658 293 TTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAM 372 (459)
Q Consensus 293 ~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~ 372 (459)
..++.+.+.+ +.+|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++++|||++++|+|+++|+++++
T Consensus 244 ~~g~~i~~~~---~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~d~f~~~l~~~~~ 320 (499)
T d1ky8a_ 244 EVGERVVKVG---GVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLS 320 (499)
T ss_dssp HHHHHHHHHH---CSSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHH
T ss_pred ccceEEeecc---cccceEEecCCCCeEEEcCCcChhhhhhhhhhhhhccCcccccccccccccchhHHHHHHHHHHHHH
Confidence 9999998875 4589999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEE---eeCCCCCCCcCcCCCcce
Q 012658 373 KRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVF---TGVKVLILISPASISPNI 449 (459)
Q Consensus 373 ~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl---~~v~~~~~i~~~EifgPv 449 (459)
++++|+|.|+.+++||++++.+++++.++|++++++||++++||.... ..++.++++ .++.+||.+++||+||||
T Consensus 321 ~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~~~eE~FGPv 398 (499)
T d1ky8a_ 321 SLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLG--PTYVQPTLVEAPADRVKDMVLYKREVFAPV 398 (499)
T ss_dssp TCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEEE--TTEECCEEEECCHHHHTTSHHHHSCCCSSE
T ss_pred hCccCCCCCccccccccchHHHHHHHHHHHHHHHHcCCEEeeeecccc--ccccccccccccccCCCCChhhhccccCce
Confidence 999999999999999999999999999999999999999999997643 334444444 355689999999999999
Q ss_pred EEEEecCCC
Q 012658 450 LHTFNGENF 458 (459)
Q Consensus 450 l~v~~~~~~ 458 (459)
++|++|+|+
T Consensus 399 l~v~~~~~~ 407 (499)
T d1ky8a_ 399 ASAVEVKDL 407 (499)
T ss_dssp EEEEEESSH
T ss_pred EEEEEcCCH
Confidence 999999985
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=1.9e-71 Score=579.57 Aligned_cols=382 Identities=29% Similarity=0.438 Sum_probs=353.6
Q ss_pred ccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 012658 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (459)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~ 144 (459)
..++||||+|+. ++.+++++||.||+++++++.++.+|+++|++.|++|++ .|++++.++|.++|+++++.|+++.
T Consensus 3 ~~~n~I~G~~~~--~~~~~~v~~P~tg~~i~~~~~a~~~dv~~Ai~~A~~A~~--~W~~~s~~~R~~iL~~~a~~L~~~~ 78 (474)
T d1euha_ 3 QYKNYVNGEWKL--SENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQP--AWRALSYIERAAYLHKVADILMRDK 78 (474)
T ss_dssp BCCEEETTEEEC--CSSEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cccceecCeecC--CCCCEEEeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHhH--HHhhCCHHHHHHHHHHHHHHHHHhH
Confidence 459999999986 467999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcc-----cC-CCCCceEEEEEccceEEEEEcCCCchHH
Q 012658 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT-----AP-ADGPYHVQTLHEPIGVAGQIIPWNFPLL 218 (459)
Q Consensus 145 ~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~-----~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~ 218 (459)
++|++++++|+|||..++. .|+...+..++++........... .+ ...+...++.++|+|||++|+|||||+.
T Consensus 79 ~~la~~~~~e~Gk~~~~a~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~n~P~~ 157 (474)
T d1euha_ 79 EKIGAILSKEVAKGYKSAV-SEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVN 157 (474)
T ss_dssp HHHHHHHHHHHTCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTH
T ss_pred HHHHHHHHHHhCCCcchhc-cccchhHHHHHHHHHHHhhhhcccccccccccccCCceeEEEeeceeEEEEeccccccch
Confidence 9999999999999998875 599999999999887665443211 11 2235567888999999999999999999
Q ss_pred hhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHH
Q 012658 219 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 298 (459)
Q Consensus 219 ~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 298 (459)
..++++++||++||+||+||++.+|.++.+++++|.++|+|+|++|+++|++.++++.|..|++|+.|.||||+.+++.+
T Consensus 158 ~~~~~~~~aL~aGN~vV~Kps~~~~~~~~~l~~~~~eaglP~gv~~~i~g~~~~~~~~L~~~~~v~~v~ftGs~~~~~~i 237 (474)
T d1euha_ 158 LAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERI 237 (474)
T ss_dssp HHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred hhhhhchhhhhccccceecccccchHHHHHHHHHHHHhCCCcCeEEEccCChHHHHHHHHhCCCccEEEecCccccccch
Confidence 99999999999999999999999999999999999999999999999999888899999999999999999999999999
Q ss_pred HHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCC
Q 012658 299 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 378 (459)
Q Consensus 299 ~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~ 378 (459)
.+.+ +.+|+++|+||+||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++++++...++.|+
T Consensus 238 ~~~a---~~k~~~~e~gG~~~~iV~~dAdl~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~~l~~~~~~~~~~~ 314 (474)
T d1euha_ 238 GKMA---GMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGN 314 (474)
T ss_dssp HHHT---TTSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSC
T ss_pred hhhc---ccceEEEecCCcceEEEECCCchhhHHHHHHHHHhhCCCCccccccccchhhhhhhhhhHhhhhhhhhccccC
Confidence 8875 4689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 379 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 379 p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
|.+.. +++|++.....+++.+.+..+...|+..+.++.. .|+|++|||+.++++||++++||+||||++|++|+|+
T Consensus 315 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~ 390 (474)
T d1euha_ 315 PEDDA-DITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSV 390 (474)
T ss_dssp GGGTC-SBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCH
T ss_pred ccccc-ccccccchHHHHHHHHHHHhhhcccccccccCCC---CCCCcCCEEEecCCCcchhhhcccCCcEEEEEEeCCH
Confidence 98764 5789999999999999999999999888766543 5899999999999999999999999999999999985
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=6.1e-66 Score=533.05 Aligned_cols=341 Identities=26% Similarity=0.335 Sum_probs=307.6
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhh
Q 012658 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184 (459)
Q Consensus 105 v~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~ 184 (459)
|++||+.|++||+ .|+.++.++|.++|++++++|++|+++|++++++|+|||..++...|+..+++.+++++......
T Consensus 2 v~~av~~Ar~Af~--~w~~~s~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~GK~~~ea~~~ev~~~i~~~~~~~~~~~~~ 79 (446)
T d1ad3a_ 2 ISDTVKRAREAFN--SGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDW 79 (446)
T ss_dssp HHHHHHHHHHHHH--TTGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH--hhCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7899999999999 99999999999999999999999999999999999999999987789999999999998876654
Q ss_pred cCcc----cCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCC
Q 012658 185 QGLT----APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPP 260 (459)
Q Consensus 185 ~~~~----~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~ 260 (459)
.... .....+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.++++++++ ++|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~vi~Kps~~~p~~~~~~~~~~~~-~~~~ 158 (446)
T d1ad3a_ 80 AEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQ-YMDQ 158 (446)
T ss_dssp HSCEECCCCSTTTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHH-HSCT
T ss_pred hcccccccCCCCCCcceEEEeecceeEecccccccccccccccccccchhcccccccccceeccccccccccccc-cccc
Confidence 3321 1122355678899999999999999999999999999999999999999999999999999999977 4999
Q ss_pred CcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhh
Q 012658 261 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 340 (459)
Q Consensus 261 g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~ 340 (459)
++++++.+.+... ..+ .++.+|.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|||+|.|++.+++++|
T Consensus 159 ~~~~~~~~~~~~~-~~~-~~~~~~~v~fTGs~~~G~~i~~~aa~-~~~~~~lElgG~np~iV~~dADl~~Aa~~iv~~~~ 235 (446)
T d1ad3a_ 159 NLYLVVKGGVPET-TEL-LKERFDHIMYTGSTAVGKIVMAAAAK-HLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF 235 (446)
T ss_dssp TTEEECCCSHHHH-HHH-TTSCCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCCCCEEEECSSSCHHHHHHHHHHHHH
T ss_pred cccccccccchhh-hhh-cccccCceEEECcHHHHHHHHHHHHh-cCCcEEEECCCcCcEEEecCCchHHHHHHHHHHHh
Confidence 9999999865544 344 46789999999999999999999987 88999999999999999999999999999999999
Q ss_pred ccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccC
Q 012658 341 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 420 (459)
Q Consensus 341 ~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~ 420 (459)
.|+||.|++++|+|||+++||+|+++|.++++.+ +|+|.++++++||++++.+++++.++++++ +...|+.. .
T Consensus 236 ~~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~-~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a-----~~~~g~~~-~ 308 (446)
T d1ad3a_ 236 MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGLIDNQ-----KVAHGGTW-D 308 (446)
T ss_dssp TTTTCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTSCCCSCHHHHHHHHHTTTTS-----CEEECCCE-E
T ss_pred cCCCCccccCCccccccchhHHHHHhhhhhhhee-ecccccccccccchhhhhhhhhhhccccch-----hcccceee-c
Confidence 9999999999999999999999999999999887 899999999999999999999988877653 44444432 3
Q ss_pred CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 421 AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 421 ~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
..++|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 309 ~~~~~~~Ptil~~v~~~~~~~~eE~FgPVl~v~~~~~~ 346 (446)
T d1ad3a_ 309 QSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSL 346 (446)
T ss_dssp TTTTEECCEEECSCCTTSGGGTSCCCSSEECEEECSSH
T ss_pred CCCCCcCCEEEECCCCCCHHHhCcccCcceEEEEeccH
Confidence 46799999999999999999999999999999999985
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=2.1e-66 Score=543.92 Aligned_cols=363 Identities=21% Similarity=0.280 Sum_probs=312.4
Q ss_pred CCCeeeeeCCCCCCEEE-EEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCC
Q 012658 79 SGKTFPTLDPRTGDVIT-HVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGK 157 (459)
Q Consensus 79 ~~~~~~v~~P~tg~~i~-~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gk 157 (459)
++++|+++||+|||.|+ +++.++.+||++|+++|++||. .|++++..+|.++|+++++.|++|.++|++++++|+||
T Consensus 1 t~~~f~~~nP~tge~l~~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk 78 (504)
T d1ez0a_ 1 TDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR--DFRRLNNSKRASLLRTIASELEARSDDIIARAHLETAL 78 (504)
T ss_dssp CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCC
T ss_pred CCCeEEEECCCCCCCcchhccCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 35789999999999997 7999999999999999999999 99999999999999999999999999999999999999
Q ss_pred ChhhhhhcchHHHHHHHHHHHHhhhhhcCccc------C---CCCCceEEEEEccceEEEEEcCCCchHHhh--HHHHHH
Q 012658 158 PFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA------P---ADGPYHVQTLHEPIGVAGQIIPWNFPLLMF--AWKVGP 226 (459)
Q Consensus 158 p~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~------~---~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~--~~~l~~ 226 (459)
|+.++. .|+..+++.++||+++.++...... + ...+...+..+.|+|||++|+|||||+... .+++++
T Consensus 79 p~~~a~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwNfPl~~~~~~~~~a~ 157 (504)
T d1ez0a_ 79 PEVRLT-GEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTAS 157 (504)
T ss_dssp CHHHHH-HHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHH
T ss_pred CHHHHH-HHHHHHHHHHHHHHHHHhhhccccccccccccccccCcccceeEEEecCceEEEEecccccchhhhhhHHHHH
Confidence 999975 6999999999999998876543221 1 112446778899999999999999999754 469999
Q ss_pred HHhcCCeEEeecCCCchHHHHHHHHH----HHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHH
Q 012658 227 ALACGNTIVLKTAEQTPLSALYVSKL----LHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (459)
Q Consensus 227 ALaaGN~VVlKps~~~p~~~~~l~~l----l~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~ 302 (459)
||++||+||+|||+.+|.++.++.++ |.++|+|+|++|+|+|++.+.++.|++||+|++|.||||+.+|+.|.+.+
T Consensus 158 ALaaGN~VVlKPs~~tp~ta~~~~~li~~a~~~aGlP~Gv~~~v~g~~~~~g~~L~~~p~v~~V~FTGS~~~g~~i~~~a 237 (504)
T d1ez0a_ 158 ALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLA 237 (504)
T ss_dssp HHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHhccceecCcccccchhhhhhhHHHHHhhhhccccCceecccccccccccccccccccceeeeccchHHHHHHHhhh
Confidence 99999999999999999998876554 56779999999999998889999999999999999999999999999999
Q ss_pred HhcCCCce--EEecCCcCcEEEccCCCHHHHH--HHHHHHhhccCCCccccCceeEeeCcchH-HHHHHHHHHHHhhccC
Q 012658 303 AKSNLKPV--TLELGGKSPFIVCEDADVDKAA--ELAHYALFFNQGQCCCAGSRTFVHESVYD-QFVEKANALAMKRVVG 377 (459)
Q Consensus 303 a~~~~~pv--~lelgG~~p~iV~~dADld~aa--~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d-~f~~~l~~~~~~~~vG 377 (459)
++ +++|+ ++|+|||||+||++|||++.|+ +.++.++|.|+||.|++++|+||+++.++ .|++.+++.++. +
T Consensus 238 a~-~~~~~~l~~ElGGknp~iV~~dAd~~~Aa~~~~~~~~~~~~~GQ~C~a~~rv~v~~~~~~~~~~~~~~~~~~~---~ 313 (504)
T d1ez0a_ 238 HE-RPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQ---Q 313 (504)
T ss_dssp HH-SSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHH---C
T ss_pred hc-ccccccccccccccccccccccccHHHHhhhhccccchhhccCccccccccccchhhhhHHHHhhhhhhhhhh---c
Confidence 87 66665 5599999999999999999874 47899999999999999999998887654 566666655442 3
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEee---CCCCCCCcCcCCCcceEEEEe
Q 012658 378 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTG---VKVLILISPASISPNILHTFN 454 (459)
Q Consensus 378 ~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~---v~~~~~i~~~EifgPvl~v~~ 454 (459)
++++.+||+++..+++++ ++.+.++|+.+..||.. +.+..|+++.. +..+|++++||+||||++|++
T Consensus 314 ---~~~~~~gp~i~~~~~~~v---i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~eE~FGPvl~i~~ 383 (504)
T d1ez0a_ 314 ---SPSTLLTPGIRDSYQSQV---VSRGSDDGIDVTFSQAE----SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVV 383 (504)
T ss_dssp ---CCBCCSSHHHHHHHHHHH---HHHHTSTTEEEEECCCC----TTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEE
T ss_pred ---ccccccccchhhhhhhhh---hhhhhhhhhhccccccc----ccccCCccccccccccccchhhcccccCCeeeeee
Confidence 457889999999887765 66777889998888753 45556666554 334788999999999999999
Q ss_pred cCCC
Q 012658 455 GENF 458 (459)
Q Consensus 455 ~~~~ 458 (459)
|+|+
T Consensus 384 ~~~~ 387 (504)
T d1ez0a_ 384 CENV 387 (504)
T ss_dssp ESSH
T ss_pred cCCH
Confidence 9985
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=4.4e-48 Score=395.72 Aligned_cols=306 Identities=18% Similarity=0.139 Sum_probs=241.5
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcc------------hHHH
Q 012658 103 EDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTE------------VPMT 170 (459)
Q Consensus 103 ~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~e------------v~~~ 170 (459)
+|+.++++.|++||+ .|+++|..+|.++|++++++|++|+++|++++++|+||+..++.. | +..+
T Consensus 1 ee~~~a~~~A~~Af~--~w~~~s~~eR~~iL~k~a~~l~~~~~eia~~~~~e~gk~~~~~~~-e~~~~rl~~~~~~i~~~ 77 (414)
T d1o20a_ 1 DELLEKAKKVREAWD--VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVK-ESLVDRLALNDKRIDEM 77 (414)
T ss_dssp CHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCC-HHHHHHHCCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhHHhcccc-HHHHHHHhccHHHHHHH
Confidence 478999999999999 999999999999999999999999999999999999999877532 3 5667
Q ss_pred HHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHH
Q 012658 171 TRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVS 250 (459)
Q Consensus 171 ~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~ 250 (459)
++.+++++...+...+...+..........++|+|+++++.|||||+.+.++++++||++||+||+|||+.+|.++..++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~~~ 157 (414)
T d1o20a_ 78 IKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIV 157 (414)
T ss_dssp HHHHHHHHHSCCCTTCEEEEEECTTSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHH
T ss_pred HHHHHHHHHhhhhccccccccccccccceeecccccccccccccCcHHHhhhccchheecccchhcccccccccccchhh
Confidence 77888887766555554443333345567788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHc----CCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcC-cEEEccC
Q 012658 251 KLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS-PFIVCED 325 (459)
Q Consensus 251 ~ll~~a----GlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~-p~iV~~d 325 (459)
+++.++ |+|.++++.+.+.+......+..+ +.+.|+||+..++.+.+.+++ +.+++++|+||+| ++||++|
T Consensus 158 ~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~v~~~a~~-~~~~~~le~gGgn~~viv~~d 233 (414)
T d1o20a_ 158 SAIREALKETEIPESSVEFIENTDRSLVLEMIRL---REYLSLVIPRGGYGLISFVRD-NATVPVLETGVGNCHIFVDES 233 (414)
T ss_dssp HHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTC---TTTCSEEEECSCHHHHHHHHH-HCSSCBCCCCCCCEEEEECTT
T ss_pred hHHHhhhhhccccccccccccccchhhhhhcccc---cccCeEEEcccHHHHHHHhhh-ccccceecccCCCCCeecccc
Confidence 998877 555556777776665665666554 344445555555666666666 5677778888765 5778899
Q ss_pred CCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHH
Q 012658 326 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 405 (459)
Q Consensus 326 ADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a 405 (459)
||+|.|++.+++++|.| ||.|++++|+|||+++||+|+++|.+.+.+..++.+.++ .. .
T Consensus 234 Ad~~~A~~~~~~~~~~~-gq~C~a~~r~~V~~~i~d~f~~~l~~~~~~~~~~~~~~~----------~~--------~-- 292 (414)
T d1o20a_ 234 ADLKKAVPVIINAKTQR-PGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCE----------KT--------R-- 292 (414)
T ss_dssp SCHHHHHHHHHHHHHSC-TTSTTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEEEECH----------HH--------H--
T ss_pred cchhhhhhHHHhhhhcC-CcccccccccchhHHHHHHHHHHHhHHHHHcCCccccch----------hh--------h--
Confidence 99999999999999877 999999999999999999999999998887665443221 11 0
Q ss_pred HhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 406 VDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 406 ~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++.+.+... ....+++|+||||++|++|+|+
T Consensus 293 -------------------~~~~~~~~~---~~~~~~~E~FgPvl~v~~~~~~ 323 (414)
T d1o20a_ 293 -------------------EIVPDVVPA---TEDDWPTEYLDLIIAIKVVKNV 323 (414)
T ss_dssp -------------------HHSTTSEEC---CGGGTTCCCCSSEEEEEEESSH
T ss_pred -------------------hhcccceec---ccccCCceeeeeEEEEEEeCCH
Confidence 011111111 1235679999999999999985
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.2e-38 Score=325.97 Aligned_cols=318 Identities=16% Similarity=0.118 Sum_probs=222.8
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHH------HHHcCCChhhh----h-h-cchHHHH
Q 012658 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALE------TWDNGKPFEQS----A-Q-TEVPMTT 171 (459)
Q Consensus 104 dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~------~~e~Gkp~~~a----~-~-~ev~~~~ 171 (459)
+++++++.|++|+. .|+.++.++|.++|+++++.|++|.++|.++. +.+.|++...- . . ..+...+
T Consensus 4 ~~e~~~~~Ak~A~~--~l~~~s~~~R~~iL~~~a~~L~~~~~eI~~aN~~Dl~~a~~~g~~~~~idRL~l~~~~ri~~~~ 81 (436)
T d1vlua_ 4 SSQQIAKNARKAGN--ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVML 81 (436)
T ss_dssp HHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHH
T ss_pred HHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHcCCcHHHHHHHhcCchHHHHHHH
Confidence 46788899999999 99999999999999999999999999998854 44456542210 0 0 1244555
Q ss_pred HHHHHHHHhhhhhcCcc--cCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHH
Q 012658 172 RLFRYYAGWADKIQGLT--APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 249 (459)
Q Consensus 172 ~~l~~~a~~~~~~~~~~--~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l 249 (459)
+.++..+...+...... ...+.+...+..+.|+||+++| ||++| ..+.+..++||++||+||+||++.++.++..+
T Consensus 82 ~~l~~i~~~~dpvg~~~~~~~~~~gl~~~~~~~P~GVigiI-~e~~P-~vt~~~~~lalksGNavIlk~~~~a~~s~~~l 159 (436)
T d1vlua_ 82 QGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVI-FESRP-EVIANITALSIKSGNAAILKGGKESVNTFREM 159 (436)
T ss_dssp HHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEE-ESSCT-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHHhccccceeEeeeeeccccceEEEeeeeeeeeecc-ccccc-hhhhhhhhcccccCCcceecCCcccccCHHHH
Confidence 66666555433322111 1133566778889999999988 66677 56677889999999999999999999999888
Q ss_pred HHHH--------HHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEE
Q 012658 250 SKLL--------HEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321 (459)
Q Consensus 250 ~~ll--------~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~i 321 (459)
++++ .++|+|+++++++++ +.+.+..|..|++||.|.||||...++.+.+. ..+|++.++||++|+|
T Consensus 160 ~~~~~~al~~a~~~aGlP~~~i~~v~~-~~~v~~~l~~~~~Id~ii~tGg~~lv~~v~~~----~~~pvi~~~~G~~~~~ 234 (436)
T d1vlua_ 160 AKIVNDTIAQFQSETGVPVGSVQLIET-RQDVSDLLDQDEYIDLVVPRGSNALVRKIKDT----TKIPVLGHADGICSIY 234 (436)
T ss_dssp HHHHHHHHHHHHHHHCCCTTSEEECCC-C--CGGGGGCTTTCCEEEEESCHHHHHHHHHT----CCSCBTTBCSCCEEEE
T ss_pred HHHHHHhhhhhccccCCCCceEEEecc-hhHHHHHhccCCCCceEEEecCCceeeeeecc----ccceEEEecCCcccee
Confidence 7765 467999999999987 45678999999999999999999988887554 4469999999999999
Q ss_pred EccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHH
Q 012658 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 401 (459)
Q Consensus 322 V~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~ 401 (459)
|++|||+|+|++.++.++|.+.|| |++.++++||+++++.|...+....+. | ..+. .++.. ...
T Consensus 235 Vd~~ADl~~A~~~i~~ak~~~~g~-C~a~e~llV~e~ia~~~~~~~~~~~~~---g------v~l~--~~~~~----~~~ 298 (436)
T d1vlua_ 235 LDEDADLIKAKRISLDAKTNYPAG-CNAMETLLINPKFSKWWEVLENLTLEG---G------VTIH--ATKDL----KTA 298 (436)
T ss_dssp ECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTSTTHHHHHHHHHHHH---C------CCBE--ECHHH----HHH
T ss_pred ecccccHHHHHHHHHHHhccCCCc-cccccceeecHhhhhhhhhhHHHHHhC---C------cEEE--eCHHH----HHH
Confidence 999999999999999999999996 889999999999999886655443332 1 1111 12221 122
Q ss_pred HHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 402 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 402 i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
..+...+++.. .+....|++......| +.+|.|+|+++|++++|+
T Consensus 299 ~~~~~~~~~~~---------~~~~~~~~~~~~~~~d---~~~E~l~pvl~v~~v~~~ 343 (436)
T d1vlua_ 299 YFDKLNELGKL---------TEAIQCKTVDADEEQD---FDKEFLSLDLAAKFVTST 343 (436)
T ss_dssp HHHHHHHHTCC---------CHHHHTTBC----------------CCCCEEEECCSH
T ss_pred hhhhhhhcccc---------cccccccccCCCcccc---hhhhhhCcceeEEEECCH
Confidence 22221111111 1223344444333333 579999999999999985
|