Citrus Sinensis ID: 012679


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------46
MDAGSMKAESRCPLQEQFLQRKNSKENLDRFIPNRSAMDFDYAHYMVTEGRKDKENNQAMSVCSPSKEAYRKQLAEVFNMNRTRILAFKNKPPTPVELIPEMHSSSASASSSVQQAKLNKPRRHIPQSSERTLDAPDLVDDYYLNLLDWGSSNVLAIALGSTVYLWDASDGTTSELVTVDDENGPVTSVNWAPDGRHIAIGLNNCQVQLWDSTANRQLRTLRGGHRSRVGSLAWNNHILTTGGMDGLIINNDVRVRDHIVETYRGHNQEVCGLKWSASGQQLASGGNDNLLHIWDRSMASSNSVTQWLHRLEEHTSAVKAIAWCPFQSNLLATGGGGGDRCIKFWNTHTGACLNSVDTGSQVCALLWNKNERELLSSHGFTQNQLTLWKYPSMVKMAELSGHTSRVLFMAQSPDGCTVASAAADETLRFWNVFGAPQVISKSAPKPNREPFAQLNRIR
cccccccccccccccccccccccccccccCCccccccccccHccccccccccccccccccccccccHHHHHHHHHHHccccccEEEEEcccccccccccccccccccccccEEEECccccccEECccccccEEEccccccccEEEEEEEccccEEEEEEccEEEEEEcccccEEEEEEcccccccEEEEEEcccccEEEEEEccccEEEEEccccEEEEEccccccccEEEEECcccEEEEECccccEEEEEcccccccccEEccccccEEEEEEcccccEEEEECccccEEEEEccccccccccccEEEcccccccEEEEEEccccccEEEEEccccccEEEEEEcccccEEEEECccccEEEEEEEccccEEEEEcccccccEEEEEcccccEEEEEEcccccEEEEEEcccccEEEEEcccccEEEEEcccccCEcccccccccccccccccccc
*******************************IPNRSAMDFDYAHYMV**************************LAEVFNMNRTRILAF***************************************SSERTLDAPDLVDDYYLNLLDWGSSNVLAIALGSTVYLWDASDGTTSELVTVDDENGPVTSVNWAPDGRHIAIGLNNCQVQLWDSTANRQLRTLRGGHRSRVGSLAWNNHILTTGGMDGLIINNDVRVRDHIVETYRGHNQEVCGLKWSASGQQLASGGNDNLLHIWDRSMASSNSVTQWLHRLEEHTSAVKAIAWCPFQSNLLATGGGGGDRCIKFWNTHTGACLNSVDTGSQVCALLWNKNERELLSSHGFTQNQLTLWKYPSMVKMAELSGHTSRVLFMAQSPDGCTVASAAADETLRFWNVFGAPQV*************AQLN*I*
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MDAGSMKAESRCPLQEQFLQRKNSKENLDRFIPNRSAMDFDYAHYMVTEGRKDKENNQAMSVCSPSKEAYRKQLAEVFNMNRTRILAFKNKPPTPVELIPEMHSSSASASSSVQQAKLNKPRRHIPQSSERTLDAPDLVDDYYLNLLDWGSSNVLAIALGSTVYLWDASDGTTSELVTVDDENGPVTSVNWAPDGRHIAIGLNNCQVQLWDSTANRQLRTLRGGHRSRVGSLAWNNHILTTGGMDGLIINNDVRVRDHIVETYRGHNQEVCGLKWSASGQQLASGGNDNLLHIWDRSMASSNSVTQWLHRLEEHTSAVKAIAWCPFQSNLLATGGGGGDRCIKFWNTHTGACLNSVDTGSQVCALLWNKNERELLSSHGFTQNQLTLWKYPSMVKMAELSGHTSRVLFMAQSPDGCTVASAAADETLRFWNVFGAPQVISKSAPKPNREPFAQLNRIR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Anaphase-promoting complex subunit cdc20 Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.probableQ54MZ3
Cell division cycle protein 20 homolog Required for full ubiquitin ligase activity of the anaphase promoting complex/cyclosome (APC/C) and may confer substrate specificity upon the complex. Is regulated by MAD2L1: in metaphase the MAD2L1-CDC20-APC/C ternary complex is inactive and in anaphase the CDC20-APC/C binary complex is active in degrading substrates. The CDC20-APC/C complex positively regulates the formation of synaptic vesicle clustering at active zone to the presynaptic membrane in postmitotic neurons. CDC20-APC/C-induced degradation of NEUROD2 induces presynaptic differentiation (By similarity). Interacts with NEK2.probableQ62623
Cell division cycle protein 20 homolog Required for full ubiquitin ligase activity of the anaphase promoting complex/cyclosome (APC/C) and may confer substrate specificity upon the complex. Is regulated by MAD2L1: in metaphase the MAD2L1-CDC20-APC/C ternary complex is inactive and in anaphase the CDC20-APC/C binary complex is active in degrading substrates. The CDC20-APC/C complex positively regulates the formation of synaptic vesicle clustering at active zone to the presynaptic membrane in postmitotic neurons. CDC20-APC/C-induced degradation of NEUROD2 induces presynaptic differentiation.probableQ9JJ66

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1NR0, chain A
Confidence level:very confident
Coverage over the Query: 142-437
View the alignment between query and template
View the model in PyMOL
Template: 4AEZ, chain A
Confidence level:very confident
Coverage over the Query: 82-102,123-434
View the alignment between query and template
View the model in PyMOL
Template: 4GGD, chain A
Confidence level:very confident
Coverage over the Query: 123-433
View the alignment between query and template
View the model in PyMOL