Citrus Sinensis ID: 012748

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------

MIPIALLIILLSCFCLDFAVAIDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPSTGSFSAGLIHQNIPEIFVWNVSRPYWRSGPWNGQIFIGIPELKSVYLFRHNFTFGFANDWTFFALTAQGILEERIWIKWKDNWEVGFLNLRTECDVYGKCGAFGICNSQEKPICSCLEGFEPKNAEEWNRGNWTSGCIRRSKLQCERRNITGKVGKEDGFSKLNKMKVPDFTEWTSPATEDECREQCLKNCSCIAYAFDGGIGCMVWRSINLIDIQRLPFGGTDLYIRVANSDVDEKGKKDVFVSPLIKGMFALAICTLFLWRWIAKRKGNVLVNFS

cccccHHHHHHHHHHHHHHHccccccccccccccccEEEEcccEEEEEEcccccccccEEEEEccccccccEEEEcccccccccccEEEEEcccccEEEEcccccEEEccccccccccccEEEEEccccEEEEEcccccEEEEcccccccccccccccccccccccEEEEEEcccccccccccEEEEEEcccccEEEEEEccEEEEEEccccccEEEEEcccccEEEEEEEEEEccccEEEEEEEccccEEEEEEEEcccccEEEEEEccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccEEEccccccccccEEcccccHHHHHHHHHccccEEEEEEcccccEEEEEccccEEEEEcccccEEEEEEEEcccccccccccEEEEHHHHHHHHHHHHHHHHHHHHHccccccccccc

cHHHHHHHHHHHHHcHHHEEEEccccccccEcccccEEEccccEEEEEEEcccccccEEEEEEEEEccccEEEEEEEcccccccccEEEEEccccEEEEEcccccEEEEccccccccccEEEEEcccccEEEEEcccccEEEEEccccccccccccccccccccccccEEEEcccccccccccEEEEEccccccEEEEEcccEEEEEccccccEEEccccccccccEEEEEEEEEEcccEEEEEEccccEEEEEEEccccccEEEEEEccccccccccccccccEEccccccccccccccccccHHHHHccccccccEEEcEcEcccccccccccccccEEEccccccccccHEEEcccHHHHHHHHHHccccEEEEEccccEEEEEEcHHHHHHHHHccccccEEEEEEHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc

MIPIALLIILLSCFCLDFAVAidssitssqlirdpdailsngsnfklgffnpadspyrymgiwydmpseKAVIWVANrdnplkdssgiitisedgnlvlvnGQKEVLWSSnvsnlvnnstsaqlldsgnlvlrdNINRAIVWEsfqeptdsflpgmhhgidqrtgkkvqltswkslsdpstgsfsaglihqnipeifvwnvsrpywrsgpwngqifigipelksvYLFRHnftfgfandwtFFALTAQGILEERIWIKWKDNWEVGFLNLRTecdvygkcgafgicnsqekpicsclegfepknaeewnrgnwtsgcirrsklqcerrnitgkvgkedgfsklnkmkvpdftewtspatedecreqclkncsciayafdggIGCMVWRSinlidiqrlpfggtdlYIRVansdvdekgkkdvfvsPLIKGMFALAICTLFLWRWIAKrkgnvlvnfs

MIPIALLIILLSCFCLDFAVAIDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTsaqlldsgnLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPSTGSFSAGLIHQNIPEIFVWNVSRPYWRSGPWNGQIFIGIPELKSVYLFRHNFTFGFANDWTFFALTAQGILEERIWIKWKDNWEVGFLNLRTECDVYGKCGAFGICNSQEKPICSCLEGFEPKnaeewnrgnwtsgcirrsklqcerrnitgkvgkedgfsklnkmkvpdfteWTSPATEDECREQCLKNCSCIAYAFDGGIGCMVWRSINLIDIQRLPFGGTDLYIRvansdvdekgkKDVFVSPLIKGMFALAICTLFLWRWIAKRKGNVLVNFS

MIPIALLIILLSCFCLDFAVAIDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEvlwssnvsnlvnnsTSAQLLDSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPSTGSFSAGLIHQNIPEIFVWNVSRPYWRSGPWNGQIFIGIPELKSVYLFRHNFTFGFANDWTFFALTAQGILEERIWIKWKDNWEVGFLNLRTECDVYGKCGAFGICNSQEKPICSCLEGFEPKNAEEWNRGNWTSGCIRRSKLQCERRNITGKVGKEDGFSKLNKMKVPDFTEWTSPATEDECREQCLKNCSCIAYAFDGGIGCMVWRSINLIDIQRLPFGGTDLYIRVANSDVDEKGKKDVFVSPLIKGMFALAICTLFLWRWIAKRKGNVLVNFS

**PIALLIILLSCFCLDFAVAIDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGI**********************SFSAGLIHQNIPEIFVWNVSRPYWRSGPWNGQIFIGIPELKSVYLFRHNFTFGFANDWTFFALTAQGILEERIWIKWKDNWEVGFLNLRTECDVYGKCGAFGICNSQEKPICSCLEGFEPKNAEEWNRGNWTSGCIRRSKLQCERRNITGKVG***GFSKLNKMKVPDFTEWTSPATEDECREQCLKNCSCIAYAFDGGIGCMVWRSINLIDIQRLPFGGTDLYIRVANSDVDEKGKKDVFVSPLIKGMFALAICTLFLWRWIAKRKGNVLV***

MIPIALLIILLSCFCLDFAVAIDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNL**NSTSAQLLDSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPSTGSFSAGLIHQNIPEIFVWNVSRPYWRSGPWNGQIFIGIPELKSVYLFRHNFTFGFANDWTFFALTAQGILEERIWIKWKDNWEVGFLNLRTECDVYGKCGAFGICNSQEKPICSCLEGFEPKNAEEWNRGNWTSGCIRRSKLQ*********VGKEDGFSKLNKMKVPDFTEWTSPATEDECREQCLKNCSCIAYAFDGGIGCMVWRSINLIDIQRLPFGGTDLYIRVANS*********VFVSPLIKGMFALAICTLFLWRWIAKRKG*******

MIPIALLIILLSCFCLDFAVAIDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPSTGSFSAGLIHQNIPEIFVWNVSRPYWRSGPWNGQIFIGIPELKSVYLFRHNFTFGFANDWTFFALTAQGILEERIWIKWKDNWEVGFLNLRTECDVYGKCGAFGICNSQEKPICSCLEGFEPKNAEEWNRGNWTSGCIRRSKLQCERRNI******EDGFSKLNKMKVPDFTEWTSPATEDECREQCLKNCSCIAYAFDGGIGCMVWRSINLIDIQRLPFGGTDLYIRVANSDVDEKGKKDVFVSPLIKGMFALAICTLFLWRWIAKRKGN******

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiii

iiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii

SSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooo

SSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii

SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		457	2.2.26 [Sep-21-2011]
Q9SXB4		820	G-type lectin S-receptor-	yes	no	0.956	0.532	0.456	1e-111
Q9SXB5		820	G-type lectin S-receptor-	no	no	0.956	0.532	0.439	1e-105
Q9SXB8		842	G-type lectin S-receptor-	no	no	0.925	0.502	0.450	1e-103
Q9LPZ9		830	G-type lectin S-receptor-	no	no	0.954	0.525	0.413	1e-94
Q9SY89		842	Putative G-type lectin S-	no	no	0.945	0.513	0.365	1e-82
O81906		849	G-type lectin S-receptor-	no	no	0.943	0.507	0.386	4e-82
O64784		821	G-type lectin S-receptor-	no	no	0.947	0.527	0.358	2e-79
O81832		783	G-type lectin S-receptor-	no	no	0.901	0.526	0.361	4e-79
O81905		850	Receptor-like serine/thre	no	no	0.894	0.481	0.367	2e-78
O64782		805	G-type lectin S-receptor-	no	no	0.943	0.535	0.340	1e-77

>sp\|Q9SXB4\|Y1130_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300 OS=Arabidopsis thaliana GN=At1g11300 PE=2 SV=1	Back alignment and function desciption

 Score =  401 bits (1031), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 210/460 (45%), Positives = 296/460 (64%), Gaps = 23/460 (5%)

Query: 8   IILLSCFCLDFAVAIDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMP 67
           I++LSCF L  ++A + +  S +L  D + I+S+   F+ GFF+P +S  RY GIWY+  
Sbjct: 13  ILVLSCFFLSVSLAQERAFFSGKL-NDSETIVSSFRTFRFGFFSPVNSTSRYAGIWYNSV 71

Query: 68  SEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVN-NSTSAQLLD 126
           S + VIWVAN+D P+ DSSG+I++S+DGNLV+ +GQ+ VLWS+NVS   + NST A+LLD
Sbjct: 72  SVQTVIWVANKDKPINDSSGVISVSQDGNLVVTDGQRRVLWSTNVSTQASANSTVAELLD 131

Query: 127 SGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGK-KVQLTSWKSLSDPSTGSFS 185
           SGNLVL++  + A +WESF+ PTDS+LP M  G + R G   V +TSWKS SDPS GS++
Sbjct: 132 SGNLVLKEASSDAYLWESFKYPTDSWLPNMLVGTNARIGGGNVTITSWKSPSDPSPGSYT 191

Query: 186 AGLIHQNIPEIFVWNVS---RPYWRSGPWNGQIFIGIPELKS-VYLFRH--------NFT 233
           A L+    PE+F+ N +      WRSGPWNGQ+F G+P++ + V+L+R         + T
Sbjct: 192 AALVLAAYPELFIMNNNNNNSTVWRSGPWNGQMFNGLPDVYAGVFLYRFIVNDDTNGSVT 251

Query: 234 FGFANDWT--FFALTAQGILEERIWIKWKDNWEVGFLNLRTECDVYGKCGAFGICNSQEK 291
             +AND T  +F +  +G +  R W + + NW VG     TECD Y +CG F  CN ++ 
Sbjct: 252 MSYANDSTLRYFYMDYRGSVIRRDWSETRRNWTVGLQVPATECDNYRRCGEFATCNPRKN 311

Query: 292 PICSCLEGFEPKNAEEWNRGNWTSGCIRRSKLQCERRNITGKVGKEDGFSKLNKMKVPDF 351
           P+CSC+ GF P+N  EWN GNW+ GC RR  LQCER+N  G     DGF +L +MK+PDF
Sbjct: 312 PLCSCIRGFRPRNLIEWNNGNWSGGCTRRVPLQCERQNNNGSA---DGFLRLRRMKLPDF 368

Query: 352 TEWTSPATEDECREQCLKNCSCIAYAFDGGIGCMVWRSINLIDIQRLPFGGTDLYIRVAN 411
               S A+E EC   CL+ CSCIA A   G GCM+W   +L+D Q L   G DLYIR+A+
Sbjct: 369 AR-RSEASEPECLRTCLQTCSCIAAAHGLGYGCMIWNG-SLVDSQELSASGLDLYIRLAH 426

Query: 412 SDVDEKGKKDVFVSPLIK-GMFALAICTLFLWRWIAKRKG 450
           S++  K K+ + +  ++  G+F +A C L   R + K++ 
Sbjct: 427 SEIKTKDKRPILIGTILAGGIFVVAACVLLARRIVMKKRA 466

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp\|Q9SXB5\|Y1135_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11305 OS=Arabidopsis thaliana GN=At1g11305 PE=2 SV=1	Back alignment and function description

>sp\|Q9SXB8\|Y1133_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 OS=Arabidopsis thaliana GN=At1g11330 PE=1 SV=3	Back alignment and function description

>sp\|Q9LPZ9\|SD113_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 OS=Arabidopsis thaliana GN=SD113 PE=1 SV=2	Back alignment and function description

>sp\|Q9SY89\|Y1661_ARATH Putative G-type lectin S-receptor-like serine/threonine-protein kinase At1g61610 OS=Arabidopsis thaliana GN=At1g61610 PE=2 SV=1	Back alignment and function description

>sp\|O81906\|B120_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase B120 OS=Arabidopsis thaliana GN=B120 PE=1 SV=1	Back alignment and function description

>sp\|O64784\|Y1136_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g61360 OS=Arabidopsis thaliana GN=At1g61360 PE=2 SV=1	Back alignment and function description

>sp\|O81832\|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=3 SV=4	Back alignment and function description

>sp\|O81905\|SD18_ARATH Receptor-like serine/threonine-protein kinase SD1-8 OS=Arabidopsis thaliana GN=SD18 PE=1 SV=1	Back alignment and function description

>sp\|O64782\|SD129_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD1-29 OS=Arabidopsis thaliana GN=SD129 PE=1 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		457
359496521		844	PREDICTED: G-type lectin S-receptor-like	0.956	0.517	0.571	1e-142
359496519		854	PREDICTED: G-type lectin S-receptor-like	0.967	0.517	0.540	1e-139
359497887		565	PREDICTED: G-type lectin S-receptor-like	0.897	0.725	0.575	1e-133
224114137		827	predicted protein [Populus trichocarpa]	0.967	0.534	0.520	1e-133
224112032		824	predicted protein [Populus trichocarpa]	0.969	0.537	0.520	1e-133
224114141		824	predicted protein [Populus trichocarpa]	0.969	0.537	0.520	1e-133
224114125		832	predicted protein [Populus trichocarpa]	0.960	0.527	0.516	1e-132
224104212		1217	predicted protein [Populus trichocarpa]	0.969	0.364	0.516	1e-132
359497280		920	PREDICTED: G-type lectin S-receptor-like	0.890	0.442	0.561	1e-132
359496523		753	PREDICTED: G-type lectin S-receptor-like	0.838	0.508	0.591	1e-130

>gi\|359496521\|ref\|XP_002262970.2\| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330-like [Vitis vinifera]	Back alignment and taxonomy information

 Score =  512 bits (1319), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 264/462 (57%), Positives = 332/462 (71%), Gaps = 25/462 (5%)

Query: 4   IALLIILLSCFCLDFAVAIDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIW 63
           +  L++LLS  C  F  AID+ +TS++ I DP+ ++SNGS FKLGFF+ ADS  RY+GIW
Sbjct: 9   VIALLLLLSVICFGFCTAIDT-MTSTRFIEDPETLVSNGSAFKLGFFSLADSTNRYVGIW 67

Query: 64  YDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQ 123
           Y  PS   VIWVANRD PL DSSGI+TISEDGNL+++NGQKE++WSSNVSN   NS SAQ
Sbjct: 68  YSTPSLSTVIWVANRDKPLNDSSGIVTISEDGNLLVMNGQKEIVWSSNVSNASANS-SAQ 126

Query: 124 LLDSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPSTGS 183
           LLDSGNLVL+DN + +I WES Q P+ S LP M    D  TG+KV LTSWKS SDPS GS
Sbjct: 127 LLDSGNLVLQDN-SGSITWESIQHPSHSLLPNMKISTDTNTGEKVVLTSWKSPSDPSIGS 185

Query: 184 FSAGLIHQNIPEIFVWNVSRPYWRSGPWNGQIFIGIPELKSVYLFRHNF----------- 232
           FS G+   NIP+IF+WN S PYWRSGPW+ QIFIGIP++ SVY  R  F           
Sbjct: 186 FSLGMNPLNIPQIFIWNGSHPYWRSGPWSSQIFIGIPDMDSVY--RSGFQVVDDKEGTVY 243

Query: 233 -TFGFAND--WTFFALTAQGILEERIWIKWKDNWEVGFLNLRTECDVYGKCGAFGICNSQ 289
            TF  AN   + ++ LT+QG L +      K+ W V + + ++ECDVYG CGAFGICNS 
Sbjct: 244 ATFTEANSSIFLYYVLTSQGSLVQTDREYGKEEWGVTWRSNKSECDVYGTCGAFGICNSG 303

Query: 290 EKPICSCLEGFEPKNAEEWNRGNWTSGCIRRSKLQCERRNITGKVGKEDGFSKLNKMKVP 349
             PICSCL G+EPK  EEW+RGNWTSGC+R++ LQCER N +G+ GK DGF +L  +KVP
Sbjct: 304 TSPICSCLRGYEPKYTEEWSRGNWTSGCVRKTTLQCERTNSSGQQGKIDGFFRLTTVKVP 363

Query: 350 DFTEWTSPATEDECREQCLKNCSCIAYAFDGGIGCMVWRSINLIDIQRLPFGGTDLYIRV 409
           D+ +W S A EDECRE+CLKNCSCIAY++  GIGCM+W S +LID+Q+    G DLYIR+
Sbjct: 364 DYADW-SLAHEDECREECLKNCSCIAYSYYSGIGCMLW-SGSLIDLQKFTKRGADLYIRL 421

Query: 410 ANSDVDEKGKKDVFV---SPLIKGMFALAICTLFLWRWIAKR 448
           A+S++  K K+D+ V     ++ G  A+AICT FLWRWI ++
Sbjct: 422 AHSELG-KNKRDMKVIISVTIVIGTIAIAICTYFLWRWIGRQ 462

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|359496519\|ref\|XP_002263029.2\| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|359497887\|ref\|XP_003635683.1\| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330-like, partial [Vitis vinifera]	Back alignment and taxonomy information

>gi\|224114137\|ref\|XP_002316677.1\| predicted protein [Populus trichocarpa] gi\|222859742\|gb\|EEE97289.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|224112032\|ref\|XP_002332843.1\| predicted protein [Populus trichocarpa] gi\|222833304\|gb\|EEE71781.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|224114141\|ref\|XP_002316678.1\| predicted protein [Populus trichocarpa] gi\|222859743\|gb\|EEE97290.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|224114125\|ref\|XP_002316674.1\| predicted protein [Populus trichocarpa] gi\|222859739\|gb\|EEE97286.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|224104212\|ref\|XP_002333971.1\| predicted protein [Populus trichocarpa] gi\|222839418\|gb\|EEE77755.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|359497280\|ref\|XP_003635472.1\| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|359496523\|ref\|XP_003635255.1\| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330-like [Vitis vinifera]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		457
TAIR\|locus:2200151		830	SD1-13 "S-domain-1 13" [Arabid	0.962	0.530	0.409	1.1e-89
TAIR\|locus:2131684		783	AT4G27290 [Arabidopsis thalian	0.892	0.521	0.377	1.3e-75
TAIR\|locus:2141181		850	RK3 "receptor kinase 3" [Arabi	0.940	0.505	0.358	1.7e-73
TAIR\|locus:2197649		821	AT1G61360 [Arabidopsis thalian	0.962	0.535	0.349	4.6e-73
TAIR\|locus:2197729		805	SD1-29 "S-domain-1 29" [Arabid	0.954	0.541	0.346	5.3e-72
TAIR\|locus:2197734		814	AT1G61370 [Arabidopsis thalian	0.954	0.535	0.341	6.1e-71
TAIR\|locus:2200888		804	AT1G61500 [Arabidopsis thalian	0.925	0.526	0.358	1.3e-70
TAIR\|locus:2197704		831	AT1G61390 [Arabidopsis thalian	0.954	0.524	0.325	2.1e-70
TAIR\|locus:2197664		804	AT1G61490 [Arabidopsis thalian	0.958	0.544	0.352	5.5e-70
TAIR\|locus:2018506		847	RK2 "receptor kinase 2" [Arabi	0.947	0.511	0.354	5.5e-70

TAIR\|locus:2200151 SD1-13 "S-domain-1 13" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 895 (320.1 bits), Expect = 1.1e-89, P = 1.1e-89
 Identities = 190/464 (40%), Positives = 271/464 (58%)

Query:     6 LLIILLS--CFCLDFAVAIDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIW 63
             LLI+LL+  CF L   +A D  IT S   RD + ++SN S F+ GFF+P +S  RY GIW
Sbjct:     4 LLILLLTLICFSLRLCLATDV-ITFSSEFRDSETVVSNHSTFRFGFFSPVNSTGRYAGIW 62

Query:    64 YDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEXXXXXXXXXXXXXXTS-A 122
             ++    + V+WVAN ++P+ DSSG+++IS++GNLV+++G+ +              T  A
Sbjct:    63 FNNIPVQTVVWVANSNSPINDSSGMVSISKEGNLVVMDGRGQVHWSTNVLVPVAANTFYA 122

Query:   123 QLLDSGNLVLRDNINRA--IVWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPS 180
             +LL++GNLVL    N    I+WESF+ P + +LP M    D +TG+ ++L SWKS  DPS
Sbjct:   123 RLLNTGNLVLLGTTNTGDEILWESFEHPQNIYLPTMSLATDTKTGRSLKLRSWKSPFDPS 182

Query:   181 TGSFSAGLIHQNIPEIFVWNVSRPYWRSGPWNGQIFIGIPELK-SVYLF--------RHN 231
              G +SAGLI    PE+ VW      WRSGPWNGQ FIG+P +   + LF        R +
Sbjct:   183 PGRYSAGLIPLPFPELVVWKDDLLMWRSGPWNGQYFIGLPNMDYRINLFELTLSSDNRGS 242

Query:   232 FTFGFANDWTF--FALTAQGILEERIWIKWKDNWEVGFLNLRTECDVYGKCGAFGIC--N 287
              +  +A +     F L ++G + +R W      W+       T+CD Y  CG F  C  N
Sbjct:   243 VSMSYAGNTLLYHFLLDSEGSVFQRDWNVAIQEWKTWLKVPSTKCDTYATCGQFASCRFN 302

Query:   288 SQEKPICSCLEGFEPKNAEEWNRGNWTSGCIRRSKLQCERRNITGKVGKEDGFSKLNKMK 347
                 P C C+ GF+P++  EWN GNWT GC+R++ LQCE R+      K DGF ++ KMK
Sbjct:   303 PGSTPPCMCIRGFKPQSYAEWNNGNWTQGCVRKAPLQCESRDNNDGSRKSDGFVRVQKMK 362

Query:   348 VPDFTEWTSPATEDECREQCLKNCSCIAYAFDGGIGCMVWRSINLIDIQRLPFGGTDLYI 407
             VP   +  S A E +C E CLKNCSC AY+FD GIGC++W S NL+D+Q     G   YI
Sbjct:   363 VPHNPQ-RSGANEQDCPESCLKNCSCTAYSFDRGIGCLLW-SGNLMDMQEFSGTGVVFYI 420

Query:   408 RVANSDVDEKGKKDVFVS-PLIKGMFALA-ICTLFLWRWIAKRK 449
             R+A+S+  ++  + + ++  L+ G F  A    L LW+ IAK +
Sbjct:   421 RLADSEFKKRTNRSIVITVTLLVGAFLFAGTVVLALWK-IAKHR 463

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=RCA;IDA

GO:0009637 "response to blue light" evidence=RCA

GO:0010155 "regulation of proton transport" evidence=RCA

GO:0016556 "mRNA modification" evidence=RCA

TAIR\|locus:2131684 AT4G27290 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2141181 RK3 "receptor kinase 3" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2197649 AT1G61360 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2197729 SD1-29 "S-domain-1 29" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2197734 AT1G61370 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2200888 AT1G61500 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2197704 AT1G61390 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2197664 AT1G61490 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2018506 RK2 "receptor kinase 2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		457
pfam01453		109	pfam01453, B_lectin, D-mannose binding lectin	2e-36
cd00028		116	cd00028, B_lectin, Bulb-type mannose-specific lect	2e-30
pfam00954		110	pfam00954, S_locus_glycop, S-locus glycoprotein fa	2e-28
smart00108		114	smart00108, B_lectin, Bulb-type mannose-specific l	2e-28
cd01098		84	cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain	1e-23
pfam08276		66	pfam08276, PAN_2, PAN-like domain	5e-18
smart00473		78	smart00473, PAN_AP, divergent subfamily of APPLE d	2e-13
cd00129		80	cd00129, PAN_APPLE, PAN/APPLE-like domain; present	0.002

>gnl\|CDD\|216511 pfam01453, B_lectin, D-mannose binding lectin	Back alignment and domain information

 Score =  129 bits (327), Expect = 2e-36
 Identities = 54/113 (47%), Positives = 68/113 (60%), Gaps = 5/113 (4%)

Query: 69  EKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSG 128
            + V+WVANR NPL DSS  + +  DGNLVL +G   V+WSSN S   +    A L D G
Sbjct: 1   NQTVVWVANRLNPLTDSSYTLILQSDGNLVLYDGNGRVVWSSNTSGKGSG-CVAVLQDDG 59

Query: 129 NLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRT-GKKVQLTSWKSLSDPS 180
           NLVL DN +  ++W+SF  PTD+ LPG          G   +LTSWKS +DPS
Sbjct: 60  NLVLYDN-SGKVLWQSFDHPTDTLLPGQ--KDGNVVIGGSRRLTSWKSNTDPS 109

These proteins include mannose-specific lectins from plants as well as bacteriocins from bacteria. Length = 109

>gnl\|CDD\|237995 cd00028, B_lectin, Bulb-type mannose-specific lectin	Back alignment and domain information

>gnl\|CDD\|201524 pfam00954, S_locus_glycop, S-locus glycoprotein family	Back alignment and domain information

>gnl\|CDD\|214519 smart00108, B_lectin, Bulb-type mannose-specific lectin	Back alignment and domain information

>gnl\|CDD\|238531 cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins	Back alignment and domain information

>gnl\|CDD\|219774 pfam08276, PAN_2, PAN-like domain	Back alignment and domain information

>gnl\|CDD\|214680 smart00473, PAN_AP, divergent subfamily of APPLE domains	Back alignment and domain information

>gnl\|CDD\|238074 cd00129, PAN_APPLE, PAN/APPLE-like domain; present in N-terminal (N) domains of plasminogen/ hepatocyte growth factor proteins, plasma prekallikrein/coagulation factor XI and microneme antigen proteins, plant receptor-like protein kinases, and various nematode and leech anti-platelet proteins	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		457
PF01453		114	B_lectin: D-mannose binding lectin; InterPro: IPR0	99.96
cd00028		116	B_lectin Bulb-type mannose-specific lectin. The do	99.94
smart00108		114	B_lectin Bulb-type mannose-specific lectin.	99.93
PF00954		110	S_locus_glycop: S-locus glycoprotein family; Inter	99.91
PF08276		66	PAN_2: PAN-like domain; InterPro: IPR013227 PAN do	99.57
cd01098		84	PAN_AP_plant Plant PAN/APPLE-like domain; present	99.48
cd00129		80	PAN_APPLE PAN/APPLE-like domain; present in N-term	99.43
smart00108		114	B_lectin Bulb-type mannose-specific lectin.	98.82
cd00028		116	B_lectin Bulb-type mannose-specific lectin. The do	98.72
smart00473		78	PAN_AP divergent subfamily of APPLE domains. Apple	98.61
PF01453		114	B_lectin: D-mannose binding lectin; InterPro: IPR0	98.22
cd01100		73	APPLE_Factor_XI_like Subfamily of PAN/APPLE-like d	97.45
smart00223		79	APPLE APPLE domain. Four-fold repeat in plasma kal	91.88
PF00024		79	PAN_1: PAN domain This Prosite entry concerns appl	91.71
PF08693		40	SKG6: Transmembrane alpha-helix domain; InterPro:	88.6
PF14295		51	PAN_4: PAN domain; PDB: 2YIL_E 2YIP_C 2YIO_A.	88.36
PF02009		299	Rifin_STEVOR: Rifin/stevor family; InterPro: IPR00	87.77
smart00605		94	CW CW domain.	87.43
PF04478		154	Mid2: Mid2 like cell wall stress sensor; InterPro:	87.24
PF08277		71	PAN_3: PAN-like domain; InterPro: IPR006583 PAN do	86.0
PF01102		122	Glycophorin_A: Glycophorin A; InterPro: IPR001195	85.12
PRK11138		394	outer membrane biogenesis protein BamB; Provisiona	84.63
cd00053		36	EGF Epidermal growth factor domain, found in epide	80.65

>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity

Back alignment and domain information

Probab=99.96  E-value=7.1e-31  Score=226.19  Aligned_cols=110  Identities=45%  Similarity=0.766  Sum_probs=80.9

Q ss_pred             CCeEEEEecCCCCCCCC--CcEEEEecCCcEEEEcCCCeEEEee-cCCCCC-CCceEEEEccCCCEEEEeccCCeEEEee
Q 012748           69 EKAVIWVANRDNPLKDS--SGIITISEDGNLVLVNGQKEVLWSS-NVSNLV-NNSTSAQLLDSGNLVLRDNINRAIVWES  144 (457)
Q Consensus        69 ~~tvVW~ANr~~Pv~~~--~~~l~l~~dG~L~l~d~~~~~vWst-~~~~~~-~~~~~a~LldsGNlVl~d~~~~~~lWQS  144 (457)
                      ++||||+|||+.|+...  ..+|.|+.||+|+|+|..++.+|++ ++.+.. .+. .|+|+|+|||||+|. .+.+||||
T Consensus         1 ~~tvvW~an~~~p~~~~s~~~~L~l~~dGnLvl~~~~~~~iWss~~t~~~~~~~~-~~~L~~~GNlvl~d~-~~~~lW~S   78 (114)
T PF01453_consen    1 PRTVVWVANRNSPLTSSSGNYTLILQSDGNLVLYDSNGSVIWSSNNTSGRGNSGC-YLVLQDDGNLVLYDS-SGNVLWQS   78 (114)
T ss_dssp             ---------TTEEEEECETTEEEEEETTSEEEEEETTTEEEEE--S-TTSS-SSE-EEEEETTSEEEEEET-TSEEEEES
T ss_pred             CcccccccccccccccccccccceECCCCeEEEEcCCCCEEEEecccCCccccCe-EEEEeCCCCEEEEee-cceEEEee
Confidence            46899999999999542  4789999999999999999999999 555543 356 999999999999997 78999999


Q ss_pred             ccCCCCcCCCCceeeeeecCCceeEEEeccCCCCCC
Q 012748          145 FQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPS  180 (457)
Q Consensus       145 Fd~PTDTLLPGq~L~~~~~tG~~~~L~Sw~s~~dps  180 (457)
                      |||||||+||||+|+.+..+|.+..|+||++.+|||
T Consensus        79 f~~ptdt~L~~q~l~~~~~~~~~~~~~sw~s~~dps  114 (114)
T PF01453_consen   79 FDYPTDTLLPGQKLGDGNVTGKNDSLTSWSSNTDPS  114 (114)
T ss_dssp             TTSSS-EEEEEET--TSEEEEESTSSEEEESS----
T ss_pred             cCCCccEEEeccCcccCCCccccceEEeECCCCCCC
Confidence            999999999999999877776666799999999996

Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....

>cd00028 B_lectin Bulb-type mannose-specific lectin	Back alignment and domain information

>smart00108 B_lectin Bulb-type mannose-specific lectin	Back alignment and domain information

>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation	Back alignment and domain information

>PF08276 PAN_2: PAN-like domain; InterPro: IPR013227 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions []	Back alignment and domain information

>cd01098 PAN_AP_plant Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins	Back alignment and domain information

>cd00129 PAN_APPLE PAN/APPLE-like domain; present in N-terminal (N) domains of plasminogen/ hepatocyte growth factor proteins, plasma prekallikrein/coagulation factor XI and microneme antigen proteins, plant receptor-like protein kinases, and various nematode and leech anti-platelet proteins	Back alignment and domain information

>smart00108 B_lectin Bulb-type mannose-specific lectin	Back alignment and domain information

>cd00028 B_lectin Bulb-type mannose-specific lectin	Back alignment and domain information

>smart00473 PAN_AP divergent subfamily of APPLE domains	Back alignment and domain information

Back alignment and domain information

>cd01100 APPLE_Factor_XI_like Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins	Back alignment and domain information

>smart00223 APPLE APPLE domain	Back alignment and domain information

>PF00024 PAN_1: PAN domain This Prosite entry concerns apple domains, a subset of PAN domains; InterPro: IPR003014 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions []	Back alignment and domain information

>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]	Back alignment and domain information

>PF14295 PAN_4: PAN domain; PDB: 2YIL_E 2YIP_C 2YIO_A	Back alignment and domain information

>PF02009 Rifin_STEVOR: Rifin/stevor family; InterPro: IPR002858 Malaria is still a major cause of mortality in many areas of the world	Back alignment and domain information

>smart00605 CW CW domain	Back alignment and domain information

>PF04478 Mid2: Mid2 like cell wall stress sensor; InterPro: IPR007567 This family represents a region near the C terminus of Mid2, which contains a transmembrane region	Back alignment and domain information

>PF08277 PAN_3: PAN-like domain; InterPro: IPR006583 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions []	Back alignment and domain information

>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane	Back alignment and domain information

>PRK11138 outer membrane biogenesis protein BamB; Provisional	Back alignment and domain information

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		457
3a0c_A		110	Mannose/sialic acid-binding lectin; beta-prism II,	2e-10
2dpf_A		115	Curculin; sweet taste, taste modifying, plant prot	5e-09
2dpf_A		115	Curculin; sweet taste, taste modifying, plant prot	2e-05
1b2p_A		119	Protein (lectin); mannose-binding lectin, monocot,	5e-09
1kj1_A		109	Lectin I, lecgna 1; BULB lectin, mannose, plant pr	3e-08
1kj1_A		109	Lectin I, lecgna 1; BULB lectin, mannose, plant pr	3e-08
3dzw_A		109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	1e-07
1xd5_A		112	Gastrodianin-1, antifungal protein GAFP-1; monocot	6e-07
3r0e_A		109	Lectin; carbohydrate binding, carbohydrate, sugar	5e-06
3r0e_A		109	Lectin; carbohydrate binding, carbohydrate, sugar	4e-04
3r0e_B		110	Lectin; carbohydrate binding, carbohydrate, sugar	9e-06
3r0e_B		110	Lectin; carbohydrate binding, carbohydrate, sugar	3e-05
1dlp_A		236	Lectin scafet precursor; two-domain lectin, beta p	2e-05
1dlp_A		236	Lectin scafet precursor; two-domain lectin, beta p	4e-05
1dlp_A		236	Lectin scafet precursor; two-domain lectin, beta p	4e-04
3mez_A		111	Mannose-specific lectin 3 chain 1; heterotetramer,	7e-05
3m7h_A		276	Putidacin L1; monocot mannose-binding lectin, bact	1e-04
3m7h_A		276	Putidacin L1; monocot mannose-binding lectin, bact	2e-04
3mez_B		113	Mannose-specific lectin 3 chain 2; heterotetramer,	2e-04

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Length = 110	Back alignment and structure

 Score = 57.1 bits (138), Expect = 2e-10
 Identities = 22/121 (18%), Positives = 46/121 (38%), Gaps = 17/121 (14%)

Query: 24  SSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLK 83
           +S++S   +      L  G +++L      +       + YD       +W +N      
Sbjct: 2   NSLSSPNSLF-TGHSLEVGPSYRLIMQGDCNF------VLYD---SGKPVWASNTGG--L 49

Query: 84  DSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWE 143
            S   +T+  +GNLV+ +    V+W +  +    +     L    N+V+       +VW 
Sbjct: 50  GSGCRLTLHNNGNLVIYDQSNRVIWQTKTNG-KEDHYVLVLQQDRNVVIYGP----VVWA 104

Query: 144 S 144
           +
Sbjct: 105 T 105

PyMOL of 3a0c

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Length = 115	Back alignment and structure

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Length = 115	Back alignment and structure

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Length = 119	Back alignment and structure

>1kj1_A Lectin I, lecgna 1; BULB lectin, mannose, plant protein; HET: MAN; 2.20A {Allium sativum} SCOP: b.78.1.1 PDB: 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Length = 109	Back alignment and structure

>1kj1_A Lectin I, lecgna 1; BULB lectin, mannose, plant protein; HET: MAN; 2.20A {Allium sativum} SCOP: b.78.1.1 PDB: 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Length = 109	Back alignment and structure

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Length = 109	Back alignment and structure

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Length = 112	Back alignment and structure

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 109	Back alignment and structure

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 109	Back alignment and structure

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 110	Back alignment and structure

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 110	Back alignment and structure

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Length = 236	Back alignment and structure

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Length = 236	Back alignment and structure

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Length = 236	Back alignment and structure

>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 111	Back alignment and structure

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Length = 276	Back alignment and structure

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Length = 276	Back alignment and structure

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 113	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		457
3m7h_A		276	Putidacin L1; monocot mannose-binding lectin, bact	100.0
1dlp_A		236	Lectin scafet precursor; two-domain lectin, beta p	100.0
4h3o_A		105	Lectin; cadmium, plant protein; 2.17A {Allium sati	99.86
3a0c_A		110	Mannose/sialic acid-binding lectin; beta-prism II,	99.85
1b2p_A		119	Protein (lectin); mannose-binding lectin, monocot,	99.84
2dpf_A		115	Curculin; sweet taste, taste modifying, plant prot	99.82
1xd5_A		112	Gastrodianin-1, antifungal protein GAFP-1; monocot	99.81
3dzw_A		109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	99.76
3r0e_B		110	Lectin; carbohydrate binding, carbohydrate, sugar	99.72
1xd5_A		112	Gastrodianin-1, antifungal protein GAFP-1; monocot	99.71
3mez_B		113	Mannose-specific lectin 3 chain 2; heterotetramer,	99.7
3a0c_A		110	Mannose/sialic acid-binding lectin; beta-prism II,	99.69
3r0e_A		109	Lectin; carbohydrate binding, carbohydrate, sugar	99.67
1b2p_A		119	Protein (lectin); mannose-binding lectin, monocot,	99.65
2dpf_A		115	Curculin; sweet taste, taste modifying, plant prot	99.64
3mez_A		111	Mannose-specific lectin 3 chain 1; heterotetramer,	99.51
3mez_B		113	Mannose-specific lectin 3 chain 2; heterotetramer,	99.49
3mez_A		111	Mannose-specific lectin 3 chain 1; heterotetramer,	99.4
3dzw_A		109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	99.31
3r0e_B		110	Lectin; carbohydrate binding, carbohydrate, sugar	99.31
3r0e_A		109	Lectin; carbohydrate binding, carbohydrate, sugar	99.29
3m7h_A		276	Putidacin L1; monocot mannose-binding lectin, bact	99.27
4h3o_A		105	Lectin; cadmium, plant protein; 2.17A {Allium sati	99.16
1dlp_A		236	Lectin scafet precursor; two-domain lectin, beta p	98.97
2l2t_A		44	Receptor tyrosine-protein kinase ERBB-4; transmemb	91.59
2ll3_A		82	Micronemal protein 4; cell adhesion; NMR {Toxoplas	90.68
2ks1_B		44	Epidermal growth factor receptor; ERBB1, ERBB2, tr	90.26
2jwa_A		44	Receptor tyrosine-protein kinase ERBB-2; transmemb	89.0

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A*	Back alignment and structure

Probab=100.00  E-value=8.2e-44  Score=350.40  Aligned_cols=226  Identities=17%  Similarity=0.215  Sum_probs=174.3

Q ss_pred             ccccccceecCCCcccCCCeEEeCCCeeEEEEECCCCCCceEEEEEEeCCCCCeEEEEecCCCCCCCC----CcEEEEec
Q 012748           18 FAVAIDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDS----SGIITISE   93 (457)
Q Consensus        18 ~~~~~d~~l~~g~~l~~~~~L~S~~g~F~lGF~~~~~~~~~ylgIwy~~~~~~tvVW~ANr~~Pv~~~----~~~l~l~~   93 (457)
                      .+++.| +|.+|++|++|++|+|++|.|+||||.++   ++||   |+  +.+ +||+|||++|+.++    +++|+|+.
T Consensus        10 ~~~~~~-~l~~g~~l~~~~~l~S~~g~F~lgf~~~~---~~~l---y~--~~~-vvW~Anr~~p~~~~~~~~~~~l~l~~   79 (276)
T 3m7h_A           10 NGVGTS-VLPAYQTLSAGQYLLSPNQRFKLLLQGDG---NLVI---QD--NGA-TVWVANEQQPFSSTIPLRNKKAPLAF   79 (276)
T ss_dssp             CCTTSS-EECTTEEBCTTCEEECTTSSEEEEECTTS---CEEE---EE--TTE-EEEECSTTSTTEEEEECCCTTCCSEE
T ss_pred             ccccCC-EecCCCEecCCCEEEcCCCcEEEEEECCC---CeEE---EC--CCC-eEEECCCCCCcCCcccccceEEEEeC
Confidence            456789 99999999999999999999999999432   4676   76  666 99999999999874    67899999


Q ss_pred             CCcEEE--EcCCCeEEEeecCCCC-----CCCceEEEEccCCCEEEEeccCCeEEEeeccCCCCcCCCCceeeeeecCCc
Q 012748           94 DGNLVL--VNGQKEVLWSSNVSNL-----VNNSTSAQLLDSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGK  166 (457)
Q Consensus        94 dG~L~l--~d~~~~~vWst~~~~~-----~~~~~~a~LldsGNlVl~d~~~~~~lWQSFd~PTDTLLPGq~L~~~~~tG~  166 (457)
                      ||+|+|  .|++|.+||+++++..     ..++ .|+|+|+|||||+|   +.+||||  ||||||||||+|+.+..+|+
T Consensus        80 ~G~Lvl~~~~~~~~~vWst~~~~~~~~~~~~~~-~a~L~d~GNlVl~~---~~~lWqS--~ptdtlLpg~~~~~~l~~g~  153 (276)
T 3m7h_A           80 YVQYGAFLDDYSRRRVWLTDNSTFTSNDQWNRT-HLVLQDDGNIVLVD---SLALWNG--TPAIPLVPGAIDSLLLAPGS  153 (276)
T ss_dssp             EESSSEEEEEGGGTEEEEECCCCCCCTTHHHHE-EEEECTTSCEEEEE---EEEEEES--CTTSCCCCSCTTCEEECSSE
T ss_pred             CCcEEEEEeCCCCCEEEEeCCCcccccccCCce-EEEEeCCCCEEecC---CceeeCc--ccccccccccccccccccCc
Confidence            999999  7888899999998642     1246 89999999999998   4799999  99999999999999988885


Q ss_pred             eeEEEeccCCCCCCCcceEEEeecCCcceEEecC-CCcceeecCCCCCceeeecccce-eeeeeeEE----EEEE-ee--
Q 012748          167 KVQLTSWKSLSDPSTGSFSAGLIHQNIPEIFVWN-VSRPYWRSGPWNGQIFIGIPELK-SVYLFRHN----FTFG-FA--  237 (457)
Q Consensus       167 ~~~L~Sw~s~~dps~G~ysl~l~~~g~~~l~~~~-~~~~yw~sg~w~g~~~~~~~~~~-~~~~~~~~----~~~~-~~--  237 (457)
                        .|   ++..||++|.|+|+|+++|..  ++++ ++.+||++|+|++.....  .+. .+.+..++    .++. ..  
T Consensus       154 --~L---~S~~dps~G~fsl~l~~dGnl--vLy~~~~~~yW~Sgt~~~~~~~l--~l~~dGnLvl~d~~~~~vWsS~t~~  224 (276)
T 3m7h_A          154 --EL---VQGVVYGAGASKLVFQGDGNL--VAYGPNGAATWNAGTQGKGAVRA--VFQGDGNLVVYGAGNAVLWHSHTGG  224 (276)
T ss_dssp             --EE---CTTCEEEETTEEEEECTTSCE--EEECTTSSEEEECCCTTTTCCEE--EECTTSCEEEECTTSCEEEECSCTT
T ss_pred             --cc---ccCCCCCCceEEEeecCCceE--EEEeCCCeEEEECCCCCCccEEE--EEcCCCeEEEEeCCCcEEEEecCCC
Confidence              46   567899999999999999964  4454 468999999987542111  111 11111111    1111 11  


Q ss_pred             CCeEEEEEecCCCEEEEEEecCCCceEEEeeecC
Q 012748          238 NDWTFFALTAQGILEERIWIKWKDNWEVGFLNLR  271 (457)
Q Consensus       238 ~~s~~~~Ld~dG~l~~y~~~~~~~~W~~~~~~p~  271 (457)
                      ....+++|+.||+|++|.|   ...|..++.+|.
T Consensus       225 ~~~~rl~Ld~dGnLvly~~---~~~Wqsf~~~P~  255 (276)
T 3m7h_A          225 HASAVLRLQANGSIAILDE---KPVWARFGFQPT  255 (276)
T ss_dssp             CTTCEEEECTTSCEEEEEE---EEEEESSSCCTT
T ss_pred             CCCEEEEEcCCccEEEEcC---CCeEEccCccCC
Confidence            1112399999999999998   245777666664

PyMOL of 3m7h

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1	Back alignment and structure

>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*	Back alignment and structure

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*	Back alignment and structure

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1	Back alignment and structure

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*	Back alignment and structure

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A	Back alignment and structure

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*	Back alignment and structure

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}	Back alignment and structure

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A	Back alignment and structure

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0	Back alignment and structure

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*	Back alignment and structure

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}	Back alignment and structure

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1	Back alignment and structure

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*	Back alignment and structure

>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0	Back alignment and structure

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0	Back alignment and structure

>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0	Back alignment and structure

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*	Back alignment and structure

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}	Back alignment and structure

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}	Back alignment and structure

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A*	Back alignment and structure

>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*	Back alignment and structure

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1	Back alignment and structure

>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}	Back alignment and structure

>2ll3_A Micronemal protein 4; cell adhesion; NMR {Toxoplasma gondii} PDB: 2ll4_M*	Back alignment and structure

>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}	Back alignment and structure

>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		457
d1kj1a_		109	b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium	2e-17
d1dlpa2		120	b.78.1.1 (A:116-235) Fetuin-binding protein Scafet	3e-15
d1dlpa2		120	b.78.1.1 (A:116-235) Fetuin-binding protein Scafet	8e-04
d1dlpa1		115	b.78.1.1 (A:1-115) Fetuin-binding protein Scafet p	2e-14
d1jpca_		108	b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galan	3e-10
d1b2pa_		119	b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scill	3e-09
d1b2pa_		119	b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scill	1e-04
d1xd5a_		112	b.78.1.1 (A:) Gastrodianin (antifungal protein) {G	1e-08

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Length = 109	Back information, alignment and structure


class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

 Score = 75.4 bits (185), Expect = 2e-17
 Identities = 18/107 (16%), Positives = 40/107 (37%), Gaps = 10/107 (9%)

Query: 39  LSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLV 98
           L  G +  +  ++        + ++         +W +N     K       +  DGN V
Sbjct: 10  LYAGQSLDVEPYHFIMQEDCNLVLYDH----STSVWASNTGILGKKGCKA-VLQSDGNFV 64

Query: 99  LVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESF 145
           + + +   LW+S+     N +    L + GN+V+  +     +W + 
Sbjct: 65  VYDAEGRSLWASHSVR-GNGNYVLVLQEDGNVVIYGS----DIWSTG 106

PyMOL of d1kj1a_

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 120	Back information, alignment and structure

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 120	Back information, alignment and structure

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 115	Back information, alignment and structure

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Length = 108	Back information, alignment and structure

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 119	Back information, alignment and structure

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 119	Back information, alignment and structure

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Length = 112	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		457
d1xd5a_		112	Gastrodianin (antifungal protein) {Gastrodia elata	99.86
d1kj1a_		109	Lectin (agglutinin) {Garlic (Allium sativum) [TaxI	99.83
d1jpca_		108	Lectin (agglutinin) {Snowdrop (Galanthus nivalis)	99.83
d1dlpa2		120	Fetuin-binding protein Scafet precursor {Bluebell	99.75
d1dlpa1		115	Fetuin-binding protein Scafet precursor {Bluebell	99.65
d1b2pa_		119	Lectin (agglutinin) {Bluebell (Scilla campanulata)	99.62
d1dlpa1		115	Fetuin-binding protein Scafet precursor {Bluebell	99.46
d1b2pa_		119	Lectin (agglutinin) {Bluebell (Scilla campanulata)	99.29
d1jpca_		108	Lectin (agglutinin) {Snowdrop (Galanthus nivalis)	99.21
d1dlpa2		120	Fetuin-binding protein Scafet precursor {Bluebell	99.19
d1kj1a_		109	Lectin (agglutinin) {Garlic (Allium sativum) [TaxI	99.17
d1xd5a_		112	Gastrodianin (antifungal protein) {Gastrodia elata	98.99
d1emoa2		39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	90.82
d2vj3a1		42	Neurogenic locus notch homolog protein 1, Notch1 {	84.46
d1xkba1		39	Factor X, N-terminal module {Human (Homo sapiens)	82.26

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]}	Back information, alignment and structure

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

Probab=99.86  E-value=2.5e-21  Score=162.93  Aligned_cols=112  Identities=18%  Similarity=0.418  Sum_probs=94.0

Q ss_pred             ccceecCCCcccCCCeEEeCCCeeEEEEECCCCCCceEEEEEEeCCCCCeEEEEecCCCCCCCCCcEEEEecCCcEEEEc
Q 012748           22 IDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVN  101 (457)
Q Consensus        22 ~d~~l~~g~~l~~~~~L~S~~g~F~lGF~~~~~~~~~ylgIwy~~~~~~tvVW~ANr~~Pv~~~~~~l~l~~dG~L~l~d  101 (457)
                      +| +|.+||.|..|++|+|  |.|+|.|+.+++     |.|++    ..++||.||++.|..  .+.|.|+.||+|+|+|
T Consensus         1 tD-tL~~gq~L~~g~~l~~--g~~~l~~q~DGN-----Lvly~----~~~~vW~s~~~~~~~--~~~l~l~~dGnLvl~~   66 (112)
T d1xd5a_           1 SD-RLNSGHQLDTGGSLAE--GGYLFIIQNDCN-----LVLYD----NNRAVWASGTNGKAS--GCVLKMQNDGNLVIYS   66 (112)
T ss_dssp             CC-EEETTEEECTTCEEEE--TTEEEEECTTSC-----EEEEE----TTEEEEECCCTTSCS--SEEEEECTTSCEEEEE
T ss_pred             CC-EecCCCEecCCCEEEE--CCEEEEEcCCCC-----EEEEc----CCcEEEEccCccCCC--CcEEEEeccccEEEEe
Confidence            48 9999999999999975  999999998664     33443    468999999998743  4689999999999999


Q ss_pred             CCCeEEEeecCCCCCCCceEEEEccCCCEEEEeccCCeEEEeeccCCCC
Q 012748          102 GQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESFQEPTD  150 (457)
Q Consensus       102 ~~~~~vWst~~~~~~~~~~~a~LldsGNlVl~d~~~~~~lWQSFd~PTD  150 (457)
                      . +.++|++++....... .|+|+|+|||||++. ++.++|||+.||++
T Consensus        67 ~-~~~~w~s~t~~~~~~~-~l~L~ddGNlvly~~-~~~~~W~S~t~~~n  112 (112)
T d1xd5a_          67 G-SRAIWASNTNRQNGNY-YLILQRDRNVVIYDN-SNNAIWATHTNVGN  112 (112)
T ss_dssp             T-TEEEEECCCCCSCCCC-EEEECTTSCEEEECT-TSCEEEECCCCCCC
T ss_pred             c-CCeEEEEeeccCCCce-EEEEcCCCCEEEECC-CCcEEecCCCccCC
Confidence            7 5678887776544456 899999999999998 67899999999985

PyMOL of d1xd5a_

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]}	Back information, alignment and structure

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]}	Back information, alignment and structure

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}	Back information, alignment and structure

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}	Back information, alignment and structure

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]}	Back information, alignment and structure

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}	Back information, alignment and structure

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]}	Back information, alignment and structure

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]}	Back information, alignment and structure

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}	Back information, alignment and structure

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]}	Back information, alignment and structure

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]}	Back information, alignment and structure

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure