Citrus Sinensis ID: 012785

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450------
MAKITPLFSLKNLLVVSLALNVSLIWRAMHESEKCNFDSSFSLQQQRRSVMAGCVLKEKEHVSERTHLSLSSSPSPSPSSSLTSTDIQSQDGGERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAKRFNKDGPYIELVTSPNNPDGSVRQSVVNRSGGILVHDLAYYWPQYTSITYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNLFVQRLSKILS
cccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHccccccccccccccccccccccccccccccccccccHHccccccEEEcccccccccccHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHccEEccccEEEEcccHHHHHHHHHHHHcccccccccEEEEccccccccHHHHcccccEEEEEccccccccccccEEEEEcccccccHHHHHHHHcccccEEEEEEECcccccccccccccccEEEcccccccccccccHHccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHccccEEEcccccccEEccccccccccccccccccccHHHHHHHHHHccCEECcccccccccccEEEEccccHHHHHHHHHHHHHHHc
****TPLFSLKNLLVVSLALNVSLIWRAMHESEKCN****************************************************SQDGGERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAKRFNKDGPYIELVTSPNNPDGSVRQSVVNRSGGILVHDLAYYWPQYTSITYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNLFVQRLSKILS
xxxxxxHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
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MAKITPLFSLKNLLVVSLALNVSLIWRAMHESEKCNFDSSFSLQQQRRSVMAGCVLKEKEHVSERTHLSLSSSPSPSPSSSLTSTDIQSQDGGERIINVDHGDPTMYEKYWQKVGDKTTIVIPGWQSLSYFSDVRNLCWFLEPEFAKEVVRLHKVVGNAITENHHIVVGTGSTQLFQAALYALSSQDASEPISVVSAAPYYSSYPSITDCVKSRLYKWAGDAKRFNKDGPYIELVTSPNNPDGSVRQSVVNRSGGILVHDLAYYWPQYTSITYPADHDLMLFTVSKSTGHAGTRIGWALVKDMEVAKKMTKYIELNTIGVSKDSQLRAAKVLKVVSDSCKPSGSEDECFFEFTNHQMSTRWKQLRMAVQKSGLFSVPELPSQFCTFLGRAFEPQPAFAWLKCEQEIEDCESFLKGNKILTRSGKHFGFSPKYVRISMLDRDENYNLFVQRLSKILS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Tryptophan aminotransferase-related protein 2 Involved in auxin production. Both TAA1 and TAR2 are required for maintaining proper auxin levels in roots, while TAA1, TAR1 and TAR2 are required for proper embryo patterning. Involved in the maintenance of the root stem cell niches.probableQ94A02

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.6.-.-Transferring nitrogenous groups.probable
2.6.1.-Transaminases (aminotransferases).probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3BWN, chain A
Confidence level:very confident
Coverage over the Query: 91-455
View the alignment between query and template
View the model in PyMOL
Template: 2HOX, chain A
Confidence level:very confident
Coverage over the Query: 36-456
View the alignment between query and template
View the model in PyMOL
Template: 3F6T, chain A
Confidence level:confident
Coverage over the Query: 8-383,397-455
View the alignment between query and template
View the model in PyMOL