Citrus Sinensis ID: 012802
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 456 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SU63 | 538 | Aldehyde dehydrogenase fa | yes | no | 0.978 | 0.828 | 0.743 | 0.0 | |
| Q8S528 | 534 | Aldehyde dehydrogenase fa | no | no | 0.910 | 0.777 | 0.797 | 0.0 | |
| Q66HF8 | 519 | Aldehyde dehydrogenase X, | yes | no | 0.907 | 0.797 | 0.596 | 1e-144 | |
| Q5R6B5 | 517 | Aldehyde dehydrogenase X, | yes | no | 0.907 | 0.800 | 0.591 | 1e-143 | |
| P30837 | 517 | Aldehyde dehydrogenase X, | yes | no | 0.907 | 0.800 | 0.586 | 1e-143 | |
| P20000 | 520 | Aldehyde dehydrogenase, m | yes | no | 0.907 | 0.796 | 0.596 | 1e-142 | |
| Q9CZS1 | 519 | Aldehyde dehydrogenase X, | yes | no | 0.907 | 0.797 | 0.588 | 1e-142 | |
| Q2XQV4 | 521 | Aldehyde dehydrogenase, m | no | no | 0.866 | 0.758 | 0.616 | 1e-142 | |
| Q5RF00 | 517 | Aldehyde dehydrogenase, m | no | no | 0.936 | 0.825 | 0.579 | 1e-140 | |
| P81178 | 500 | Aldehyde dehydrogenase, m | N/A | no | 0.899 | 0.82 | 0.597 | 1e-140 |
| >sp|Q9SU63|AL2B4_ARATH Aldehyde dehydrogenase family 2 member B4, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B4 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 717 bits (1852), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/456 (74%), Positives = 393/456 (86%), Gaps = 10/456 (2%)
Query: 1 MAARRIPLLLSRSFTSSSPTLF-SRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITP 59
MAARR+ LLSRSF++SSP LF S+GR+ C +++AAAE+ I P
Sbjct: 1 MAARRVSSLLSRSFSASSPLLFRSQGRN---CYNGGI------LRRFGTSSAAAEEIINP 51
Query: 60 PVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG 119
V+V +TQLLING FVDSASGKTFPTLDPRTG+VI HVAEG+AED+NRAV AAR AFDEG
Sbjct: 52 SVQVSHTQLLINGNFVDSASGKTFPTLDPRTGEVIAHVAEGDAEDINRAVKAARTAFDEG 111
Query: 120 PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179
PWP+M+AYERS+++LRFADL+E+H++E+A+LETWDNGKP++QS E+PM RLFRYYAG
Sbjct: 112 PWPKMSAYERSRVLLRFADLVEKHSEELASLETWDNGKPYQQSLTAEIPMFARLFRYYAG 171
Query: 180 WADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239
WADKI GLT PADG Y V TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA
Sbjct: 172 WADKIHGLTIPADGNYQVHTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 231
Query: 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299
EQTPL+A Y KL EAGLPPGVLNIVSG+G TAGAALASHM+VDKLAFTGST TGK++L
Sbjct: 232 EQTPLTAFYAGKLFLEAGLPPGVLNIVSGFGATAGAALASHMDVDKLAFTGSTDTGKVIL 291
Query: 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
LAA SNLKPVTLELGGKSPFIV EDAD+DKA ELAH+ALFFNQGQCCCAGSRTFVHE V
Sbjct: 292 GLAANSNLKPVTLELGGKSPFIVFEDADIDKAVELAHFALFFNQGQCCCAGSRTFVHEKV 351
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 419
YD+FVEK+ A A+KRVVGDPF+ GI+QGPQID +QFEK++KYI+SG++ A LE GG+++
Sbjct: 352 YDEFVEKSKARALKRVVGDPFRKGIEQGPQIDLKQFEKVMKYIKSGIESNATLECGGDQI 411
Query: 420 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 455
G KGY+I+PTVF+ VKDDMLIA+DEIFGPVQSILK+
Sbjct: 412 GDKGYFIQPTVFSNVKDDMLIAQDEIFGPVQSILKF 447
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Possesses activity on acetaldehyde and glycolaldehyde in vitro. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 3 |
| >sp|Q8S528|AL2B7_ARATH Aldehyde dehydrogenase family 2 member B7, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B7 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/415 (79%), Positives = 375/415 (90%)
Query: 42 GYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGE 101
G S+ AAA E+ ITPPVKV++TQLLI G+FVD+ SGKTFPTLDPR G+VI V+EG+
Sbjct: 30 GAQRYSNLAAAVENTITPPVKVEHTQLLIGGRFVDAVSGKTFPTLDPRNGEVIAQVSEGD 89
Query: 102 AEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQ 161
AEDVNRAV+AARKAFDEGPWP+MTAYERSKI+ RFADL+E+HNDEIAALETWDNGKP+EQ
Sbjct: 90 AEDVNRAVAAARKAFDEGPWPKMTAYERSKILFRFADLIEKHNDEIAALETWDNGKPYEQ 149
Query: 162 SAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221
SAQ EVPM R+FRYYAGWADKI G+T P DGP+HVQTLHEPIGVAGQIIPWNFPLLM +
Sbjct: 150 SAQIEVPMLARVFRYYAGWADKIHGMTMPGDGPHHVQTLHEPIGVAGQIIPWNFPLLMLS 209
Query: 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHM 281
WK+GPALACGNT+VLKTAEQTPLSAL V KLLHEAGLP GV+NIVSG+G TAGAA+ASHM
Sbjct: 210 WKLGPALACGNTVVLKTAEQTPLSALLVGKLLHEAGLPDGVVNIVSGFGATAGAAIASHM 269
Query: 282 EVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 341
+VDK+AFTGST GKI+L+LA+KSNLK VTLELGGKSPFIVCEDADVD+A ELAH+ALFF
Sbjct: 270 DVDKVAFTGSTDVGKIILELASKSNLKAVTLELGGKSPFIVCEDADVDQAVELAHFALFF 329
Query: 342 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 401
NQGQCCCAGSRTFVHE VYD+FVEKA A A+KR VGDPFK GI+QGPQ+DSEQF KILKY
Sbjct: 330 NQGQCCCAGSRTFVHERVYDEFVEKAKARALKRNVGDPFKSGIEQGPQVDSEQFNKILKY 389
Query: 402 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
I+ GV+ GA L+ GG+RLG+KGYYI+PTVF+ VKDDMLIA DEIFGPVQ+ILK+K
Sbjct: 390 IKHGVEAGATLQAGGDRLGSKGYYIQPTVFSDVKDDMLIATDEIFGPVQTILKFK 444
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Possesses activity on acetaldehyde and glycolaldehyde in vitro. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q66HF8|AL1B1_RAT Aldehyde dehydrogenase X, mitochondrial OS=Rattus norvegicus GN=Aldh1b1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 512 bits (1318), Expect = e-144, Method: Compositional matrix adjust.
Identities = 248/416 (59%), Positives = 310/416 (74%), Gaps = 2/416 (0%)
Query: 42 GYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGE 101
G +T+ S AAA +PI P ++ Y QL IN ++ D+ S KTFPT++P TG+VI HVAEG+
Sbjct: 16 GRTTSYSTAAALPNPIPNP-EIRYNQLFINNEWHDAVSKKTFPTVNPTTGEVIGHVAEGD 74
Query: 102 AEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE 160
DV+ AV AAR+AF G PW RM A ER +++ R ADL+ER +A+LET DNGKPF+
Sbjct: 75 RADVDLAVRAAREAFRLGSPWRRMDASERGRLLNRLADLVERDRVYLASLETLDNGKPFQ 134
Query: 161 QSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220
+S ++ +++RY AGWADK G T P DG + T HEP+GV GQIIPWNFPL+M
Sbjct: 135 ESYVLDLDEVIKVYRYLAGWADKWHGKTIPMDGEHFCFTRHEPVGVCGQIIPWNFPLVMQ 194
Query: 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 280
WK+ PALA GNT+V+K AEQTPLSALY++ L+ EAG PPGV+NI++GYGPTAGAA+A H
Sbjct: 195 GWKLAPALATGNTVVMKVAEQTPLSALYLASLIKEAGFPPGVVNIITGYGPTAGAAIAQH 254
Query: 281 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 340
M+VDK+AFTGST G ++ + A SNLK VTLELGGKSP IV DAD+D A + H ALF
Sbjct: 255 MDVDKVAFTGSTEVGHLIQKAAGDSNLKRVTLELGGKSPSIVLADADMDHAVDQCHEALF 314
Query: 341 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 400
FN GQCCCAGSRTFV ES+Y +F+E+ A KR VG+PF+ QQGPQ+D EQFEKIL
Sbjct: 315 FNMGQCCCAGSRTFVEESIYHEFLERTVEKAKKRKVGNPFELDTQQGPQVDKEQFEKILG 374
Query: 401 YIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
YIR G GAKL GGER G +G++IKPTVF V+DDM IA++EIFGPVQ + K+K
Sbjct: 375 YIRLGQKEGAKLLCGGERFGERGFFIKPTVFGNVQDDMRIAREEIFGPVQPLFKFK 430
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ALDHs play a major role in the detoxification of alcohol-derived acetaldehyde. They are involved in the metabolism of corticosteroids, biogenic amines, neurotransmitters, and lipid peroxidation. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q5R6B5|AL1B1_PONAB Aldehyde dehydrogenase X, mitochondrial OS=Pongo abelii GN=ALDH1B1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 509 bits (1312), Expect = e-143, Method: Compositional matrix adjust.
Identities = 246/416 (59%), Positives = 310/416 (74%), Gaps = 2/416 (0%)
Query: 42 GYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGE 101
G + S+AAA PI P + Y QL IN ++ D+ S KTFPT++P TG+VI HVAEG+
Sbjct: 14 GRTARYSSAAALPSPILNP-DIPYNQLFINNEWQDAVSKKTFPTVNPTTGEVIGHVAEGD 72
Query: 102 AEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE 160
DV+RAV AAR+AF G PW RM A ER +++ ADL+ER +A+LET DNGKPF+
Sbjct: 73 RADVDRAVKAAREAFRLGSPWRRMDASERGRLLNCLADLVERDRVYLASLETLDNGKPFQ 132
Query: 161 QSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220
+S ++ +++RY+AGWADK G T P DG + T HEPIGV GQIIPWNFPL+M
Sbjct: 133 ESYALDLDEVIKVYRYFAGWADKWHGKTIPMDGQHFCFTRHEPIGVCGQIIPWNFPLVMQ 192
Query: 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 280
WK+ PALA GNT+V+K AEQTPLSALY++ L+ EAG PPGV+NI++GYGPTAGAA+A H
Sbjct: 193 GWKLAPALATGNTVVMKVAEQTPLSALYLASLIKEAGFPPGVVNIITGYGPTAGAAIAQH 252
Query: 281 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 340
M+VDK+AFTGST G ++ + A SNLK VTLELGGKSP IV DAD++ A E H ALF
Sbjct: 253 MDVDKVAFTGSTEVGHLIQKAAGDSNLKRVTLELGGKSPSIVLADADMEHAVEQCHEALF 312
Query: 341 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 400
FN GQCCCAGSRTFV ES+Y++F+E+ A +R VG+PF+ QQGPQ+D EQFE++L
Sbjct: 313 FNMGQCCCAGSRTFVEESIYNEFLERTVEKAKQRKVGNPFELDTQQGPQVDKEQFERVLG 372
Query: 401 YIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
YI+ G GAKL GGER G +G++IKPTVF GV+DDM IAK+EIFGPVQ + K+K
Sbjct: 373 YIQLGQKEGAKLLCGGERFGERGFFIKPTVFGGVQDDMRIAKEEIFGPVQPLFKFK 428
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ALDHs play a major role in the detoxification of alcohol-derived acetaldehyde. They are involved in the metabolism of corticosteroids, biogenic amines, neurotransmitters, and lipid peroxidation. Pongo abelii (taxid: 9601) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P30837|AL1B1_HUMAN Aldehyde dehydrogenase X, mitochondrial OS=Homo sapiens GN=ALDH1B1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 507 bits (1305), Expect = e-143, Method: Compositional matrix adjust.
Identities = 244/416 (58%), Positives = 310/416 (74%), Gaps = 2/416 (0%)
Query: 42 GYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGE 101
G + S+AAA PI P + Y QL IN ++ D+ S KTFPT++P TG+VI HVAEG+
Sbjct: 14 GRTARYSSAAALPSPILNP-DIPYNQLFINNEWQDAVSKKTFPTVNPTTGEVIGHVAEGD 72
Query: 102 AEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE 160
DV+RAV AAR+AF G PW RM A ER +++ ADL+ER +A+LET DNGKPF+
Sbjct: 73 RADVDRAVKAAREAFRLGSPWRRMDASERGRLLNLLADLVERDRVYLASLETLDNGKPFQ 132
Query: 161 QSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220
+S ++ +++RY+AGWADK G T P DG + T HEP+GV GQIIPWNFPL+M
Sbjct: 133 ESYALDLDEVIKVYRYFAGWADKWHGKTIPMDGQHFCFTRHEPVGVCGQIIPWNFPLVMQ 192
Query: 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 280
WK+ PALA GNT+V+K AEQTPLSALY++ L+ EAG PPGV+NI++GYGPTAGAA+A H
Sbjct: 193 GWKLAPALATGNTVVMKVAEQTPLSALYLASLIKEAGFPPGVVNIITGYGPTAGAAIAQH 252
Query: 281 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 340
++VDK+AFTGST G ++ + A SNLK VTLELGGKSP IV DAD++ A E H ALF
Sbjct: 253 VDVDKVAFTGSTEVGHLIQKAAGDSNLKRVTLELGGKSPSIVLADADMEHAVEQCHEALF 312
Query: 341 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 400
FN GQCCCAGSRTFV ES+Y++F+E+ A +R VG+PF+ QQGPQ+D EQFE++L
Sbjct: 313 FNMGQCCCAGSRTFVEESIYNEFLERTVEKAKQRKVGNPFELDTQQGPQVDKEQFERVLG 372
Query: 401 YIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
YI+ G GAKL GGER G +G++IKPTVF GV+DDM IAK+EIFGPVQ + K+K
Sbjct: 373 YIQLGQKEGAKLLCGGERFGERGFFIKPTVFGGVQDDMRIAKEEIFGPVQPLFKFK 428
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ALDHs play a major role in the detoxification of alcohol-derived acetaldehyde. They are involved in the metabolism of corticosteroids, biogenic amines, neurotransmitters, and lipid peroxidation. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P20000|ALDH2_BOVIN Aldehyde dehydrogenase, mitochondrial OS=Bos taurus GN=ALDH2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 506 bits (1302), Expect = e-142, Method: Compositional matrix adjust.
Identities = 248/416 (59%), Positives = 303/416 (72%), Gaps = 2/416 (0%)
Query: 42 GYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGE 101
G S+A A P P +V Y Q+ IN ++ D+ S KTFPT++P TGDVI HVAEG+
Sbjct: 17 GRRLLSAATQAVPTPNQQP-EVLYNQIFINNEWHDAVSKKTFPTVNPSTGDVICHVAEGD 75
Query: 102 AEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE 160
DV+RAV AAR AF G PW RM A ER +++ R ADL+ER +AALET DNGKP+
Sbjct: 76 KADVDRAVKAARAAFQLGSPWRRMDASERGRLLNRLADLIERDRTYLAALETLDNGKPYI 135
Query: 161 QSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220
S ++ M + RYYAGWADK G T P DG Y T HEP+GV GQIIPWNFPLLM
Sbjct: 136 ISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQ 195
Query: 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 280
AWK+GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+N++ G+GPTAGAA+ASH
Sbjct: 196 AWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIASH 255
Query: 281 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 340
+VDK+AFTGST G ++ A KSNLK VTLELGGKSP I+ DAD+D A E AH+ALF
Sbjct: 256 EDVDKVAFTGSTEVGHLIQVAAGKSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF 315
Query: 341 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 400
FNQGQCCCAGSRTFV E +Y +FVE++ A A RVVG+PF +QGPQ+D QF+K+L
Sbjct: 316 FNQGQCCCAGSRTFVQEDIYAEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKVLG 375
Query: 401 YIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
YI+SG + GAKL GG +GY+I+PTVF V+D M IAK+EIFGPV ILK+K
Sbjct: 376 YIKSGKEEGAKLLCGGGAAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFK 431
|
Bos taurus (taxid: 9913) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q9CZS1|AL1B1_MOUSE Aldehyde dehydrogenase X, mitochondrial OS=Mus musculus GN=Aldh1b1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 506 bits (1302), Expect = e-142, Method: Compositional matrix adjust.
Identities = 245/416 (58%), Positives = 312/416 (75%), Gaps = 2/416 (0%)
Query: 42 GYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGE 101
G +T+ S AAA +PI P ++ Y +L IN ++ D+ S KTFPT++P TG+VI HVAEG+
Sbjct: 16 GRTTSYSTAAALPNPIPNP-EICYNKLFINNEWHDAVSKKTFPTVNPTTGEVIGHVAEGD 74
Query: 102 AEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE 160
DV+ AV AAR+AF G PW RM A ER +++ R ADL+ER +A+LET DNGKPF+
Sbjct: 75 RADVDLAVKAAREAFRLGSPWRRMDASERGRLLNRLADLVERDRVYLASLETLDNGKPFQ 134
Query: 161 QSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220
+S ++ +++RY+AGWADK G T P DG + T HEP+GV GQIIPWNFPL+M
Sbjct: 135 ESYVLDLDEVIKVYRYFAGWADKWHGKTIPMDGEHFCFTRHEPVGVCGQIIPWNFPLVMQ 194
Query: 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 280
WK+ PALA GNT+V+K AEQTPLSALY++ L+ EAG PPGV+NI++GYGPTAGAA+A H
Sbjct: 195 GWKLAPALATGNTVVMKVAEQTPLSALYLASLIKEAGFPPGVVNIITGYGPTAGAAIAQH 254
Query: 281 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 340
M+VDK+AFTGST G ++ + A +SNLK VTLELGGKSP IV DAD++ A + H ALF
Sbjct: 255 MDVDKVAFTGSTEVGHLIQKAAGESNLKRVTLELGGKSPSIVLADADMEHAVDQCHEALF 314
Query: 341 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 400
FN GQCCCAGSRTFV ES+Y +F+E+ A +R VG+PF+ QQGPQ+D EQFE+IL
Sbjct: 315 FNMGQCCCAGSRTFVEESIYREFLERTVEKAKQRKVGNPFELDTQQGPQVDKEQFERILG 374
Query: 401 YIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
YIR G GAKL GGERLG +G++IKPTVF V+D M IAK+EIFGPVQ + K+K
Sbjct: 375 YIRLGQKEGAKLLCGGERLGERGFFIKPTVFGDVQDGMRIAKEEIFGPVQPLFKFK 430
|
ALDHs play a major role in the detoxification of alcohol-derived acetaldehyde. They are involved in the metabolism of corticosteroids, biogenic amines, neurotransmitters, and lipid peroxidation. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q2XQV4|ALDH2_PIG Aldehyde dehydrogenase, mitochondrial OS=Sus scrofa GN=ALDH2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 505 bits (1300), Expect = e-142, Method: Compositional matrix adjust.
Identities = 244/396 (61%), Positives = 297/396 (75%), Gaps = 1/396 (0%)
Query: 62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-P 120
++ Y Q+ IN ++ D+ S KTFPT++P TGDVI HVAEG+ EDV+RAV AAR AF G P
Sbjct: 37 EIFYNQIFINNEWHDAISKKTFPTVNPSTGDVICHVAEGDKEDVDRAVEAARAAFQLGSP 96
Query: 121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
W R+ A +R +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGW
Sbjct: 97 WRRLDASDRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGW 156
Query: 181 ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 240
ADK G T P DG Y T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K +E
Sbjct: 157 ADKYHGKTLPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVSE 216
Query: 241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
QTPL+ALYV+ L+ EAG PPGV+NIV GYGPTAGAA+ASH +VDK+AFTGST G ++
Sbjct: 217 QTPLTALYVANLIKEAGFPPGVVNIVPGYGPTAGAAIASHEDVDKVAFTGSTEVGHLIQV 276
Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
A KSNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCCAGSRTFV E +Y
Sbjct: 277 AAGKSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIY 336
Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 420
+FVE++ A A RVVG+PF +QGPQID QF+KIL YI+SG + GAKL GG
Sbjct: 337 AEFVERSVARARSRVVGNPFDSRTEQGPQIDETQFKKILGYIKSGKEEGAKLLCGGGAAA 396
Query: 421 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
+GY+I+PTVF V+D M IAK+EIFGPV ILK+K
Sbjct: 397 DRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFK 432
|
Is capable of converting retinaldehyde to retinoic acid. Sus scrofa (taxid: 9823) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q5RF00|ALDH2_PONAB Aldehyde dehydrogenase, mitochondrial OS=Pongo abelii GN=ALDH2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 499 bits (1285), Expect = e-140, Method: Compositional matrix adjust.
Identities = 248/428 (57%), Positives = 304/428 (71%), Gaps = 1/428 (0%)
Query: 30 LCRAAAAAAASCGYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPR 89
+ RAAA G S+AA A +V Q+ IN ++ D+ S KTFPT++P
Sbjct: 1 MLRAAARFGPRLGRRLLSAAATQAVPAPNQQPEVFCNQIFINNEWHDAVSRKTFPTVNPS 60
Query: 90 TGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIA 148
TG+VI VAEG+ EDV++AV AAR AF G PW RM A R +++ R ADL+ER +A
Sbjct: 61 TGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLA 120
Query: 149 ALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAG 208
ALET DNGKP+ S ++ M + RYYAGWADK G T P DG + T HEP+GV G
Sbjct: 121 ALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCG 180
Query: 209 QIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSG 268
QIIPWNFPLLM AWK+GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G
Sbjct: 181 QIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPG 240
Query: 269 YGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADV 328
+GPTAGAA+ASH +VDK+AFTGST G+++ A SNLK VTLELGGKSP I+ DAD+
Sbjct: 241 FGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADM 300
Query: 329 DKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGP 388
D A E AH+ALFFNQGQCCCAGSRTFV E +YD+FVE++ A A RVVG+PF +QGP
Sbjct: 301 DWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGP 360
Query: 389 QIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGP 448
Q+D QF+KIL YI +G GAKL GG +GY+I+PTVF V+D M IAK+EIFGP
Sbjct: 361 QVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGP 420
Query: 449 VQSILKYK 456
V ILK+K
Sbjct: 421 VMQILKFK 428
|
Is capable of converting retinaldehyde to retinoic acid. Pongo abelii (taxid: 9601) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P81178|ALDH2_MESAU Aldehyde dehydrogenase, mitochondrial OS=Mesocricetus auratus GN=ALDH2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 499 bits (1284), Expect = e-140, Method: Compositional matrix adjust.
Identities = 246/412 (59%), Positives = 301/412 (73%), Gaps = 2/412 (0%)
Query: 46 ASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDV 105
+++A +A P P +V Q+ IN ++ D+ S KTFPT++P TG+VI VAEG EDV
Sbjct: 1 SAAATSAVPAPNQQP-EVFCNQIFINNEWHDAVSKKTFPTVNPSTGEVICQVAEGSKEDV 59
Query: 106 NRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164
++AV AAR AF G PW RM A +R +++ R ADL+ER +AALET DNGKP+ S
Sbjct: 60 DKAVKAARAAFQLGSPWRRMDASDRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYL 119
Query: 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224
++ M + RYYAGWADK G T P DG + T HEP+GV GQIIPWNFPLLM AWK+
Sbjct: 120 VDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKL 179
Query: 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVD 284
GPALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VD
Sbjct: 180 GPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVD 239
Query: 285 KLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 344
K+AFTGST G ++ A SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQG
Sbjct: 240 KVAFTGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQG 299
Query: 345 QCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 404
QCCCAGSRTFV E VYD+FVE++ A A RVVG+PF +QGPQ+D QF+KIL YI+S
Sbjct: 300 QCCCAGSRTFVQEDVYDEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKILGYIKS 359
Query: 405 GVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
G GAKL GG +GY+I+PTVF VKD M IAK+EIFGPV ILK+K
Sbjct: 360 GQQEGAKLLCGGGAAADRGYFIQPTVFGDVKDGMTIAKEEIFGPVMQILKFK 411
|
Mesocricetus auratus (taxid: 10036) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 456 | ||||||
| 356497822 | 538 | PREDICTED: aldehyde dehydrogenase family | 0.975 | 0.827 | 0.780 | 0.0 | |
| 356501653 | 539 | PREDICTED: aldehyde dehydrogenase family | 0.969 | 0.820 | 0.786 | 0.0 | |
| 224064707 | 540 | predicted protein [Populus trichocarpa] | 0.982 | 0.829 | 0.770 | 0.0 | |
| 223452696 | 534 | mitochondrial benzaldehyde dehydrogenase | 0.973 | 0.831 | 0.774 | 0.0 | |
| 356567618 | 536 | PREDICTED: aldehyde dehydrogenase family | 0.905 | 0.770 | 0.826 | 0.0 | |
| 225424691 | 538 | PREDICTED: aldehyde dehydrogenase family | 0.896 | 0.760 | 0.836 | 0.0 | |
| 356526813 | 536 | PREDICTED: aldehyde dehydrogenase family | 0.905 | 0.770 | 0.818 | 0.0 | |
| 225452510 | 535 | PREDICTED: aldehyde dehydrogenase family | 0.975 | 0.831 | 0.769 | 0.0 | |
| 297850852 | 534 | hypothetical protein ARALYDRAFT_472641 [ | 0.971 | 0.829 | 0.772 | 0.0 | |
| 449440686 | 548 | PREDICTED: aldehyde dehydrogenase family | 0.899 | 0.748 | 0.812 | 0.0 |
| >gi|356497822|ref|XP_003517756.1| PREDICTED: aldehyde dehydrogenase family 2 member B7, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 752 bits (1942), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/456 (78%), Positives = 404/456 (88%), Gaps = 11/456 (2%)
Query: 2 AARRIPLLLSRSFTSSSPT-LFSRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITPP 60
++ RI LLSRSF S+S T LFSR + A + S AAA E+PI PP
Sbjct: 3 SSMRISRLLSRSFLSASTTPLFSR----------GGSGALGAGLSKFSTAAAIEEPIKPP 52
Query: 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP 120
VKV++TQLLI+G+FVD+A+GKTFPTLDPRTGDVI+HVAEG+ EDV+RAV+AARKAFD GP
Sbjct: 53 VKVEHTQLLIDGKFVDAATGKTFPTLDPRTGDVISHVAEGDHEDVDRAVAAARKAFDHGP 112
Query: 121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
WP+MTAYER +I+LR ADL E+HNDE+AALETWDNGKP+EQSAQ E+PM RLFRYYAGW
Sbjct: 113 WPKMTAYERQRILLRAADLFEKHNDELAALETWDNGKPYEQSAQIEIPMLVRLFRYYAGW 172
Query: 181 ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 240
ADKI GLT PADGPYHVQTLHEPIGVAGQIIPWNFPL+MFAWKVGPALACGNTIVLKTAE
Sbjct: 173 ADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLVMFAWKVGPALACGNTIVLKTAE 232
Query: 241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
QTPLSALY SKLLHEAGLPPGVLN++SG+GPTAGAA+ASHM++DKLAFTGST TGK+VL+
Sbjct: 233 QTPLSALYASKLLHEAGLPPGVLNVISGFGPTAGAAIASHMDIDKLAFTGSTETGKVVLE 292
Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
LAA+SNLKPVTLELGGKSPFIVCEDADVD+A ELAH+ALFFNQGQCCCAGSRTFVHE VY
Sbjct: 293 LAARSNLKPVTLELGGKSPFIVCEDADVDEAVELAHFALFFNQGQCCCAGSRTFVHERVY 352
Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 420
D+F+EKA A A+KR VGDPFKGGI+QGPQIDSEQF+KILKYIRSGV+ GA LETGG+R G
Sbjct: 353 DEFIEKAKARALKRAVGDPFKGGIEQGPQIDSEQFQKILKYIRSGVESGATLETGGDRFG 412
Query: 421 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
G+YI+PTVF+ VKDDMLIAK+EIFGPVQ+ILK+K
Sbjct: 413 NSGFYIQPTVFSNVKDDMLIAKEEIFGPVQTILKFK 448
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356501653|ref|XP_003519638.1| PREDICTED: aldehyde dehydrogenase family 2 member B7, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 752 bits (1941), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/454 (78%), Positives = 402/454 (88%), Gaps = 12/454 (2%)
Query: 5 RIPLLLSRSFTSSSPT--LFSRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITPPVK 62
RI LLSRSF S+S T LFSR + A + S AAA E+PI PP+K
Sbjct: 6 RISRLLSRSFLSASTTTPLFSR----------GGSGALGAGLSKFSTAAAIEEPIKPPLK 55
Query: 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP 122
V++TQLLI+G+FVD+A+GKTFPTLDPRTGDVI+HVAEG+ EDV+RAV+AARKAFD GPWP
Sbjct: 56 VEHTQLLIDGKFVDAATGKTFPTLDPRTGDVISHVAEGDHEDVDRAVAAARKAFDRGPWP 115
Query: 123 RMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWAD 182
+MTAYER +I+LR ADL E+HND++AALETWDNGKP+EQSAQ E+PM RLFRYYAGWAD
Sbjct: 116 KMTAYERQRILLRAADLFEKHNDDLAALETWDNGKPYEQSAQIEIPMLVRLFRYYAGWAD 175
Query: 183 KIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242
KI GLT PADGPYHVQTLHEPIGVAGQIIPWNFPL+MFAWKVGPALACGNTIVLKTAEQT
Sbjct: 176 KIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLVMFAWKVGPALACGNTIVLKTAEQT 235
Query: 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
PLSALY SKLLHEAGLPPGVLNI+SG+GPTAGAA+ASHM++DKLAFTGST TGKIVL+LA
Sbjct: 236 PLSALYASKLLHEAGLPPGVLNIISGFGPTAGAAIASHMDIDKLAFTGSTETGKIVLELA 295
Query: 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 362
A+SNLKPVTLELGGKSPFIVCEDADVD+A ELAH+ALFFNQGQCCCAGSRTFVHE VYD+
Sbjct: 296 ARSNLKPVTLELGGKSPFIVCEDADVDEAVELAHFALFFNQGQCCCAGSRTFVHERVYDE 355
Query: 363 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 422
F+EKA A A+KR VGDPFKGGI+QGPQIDSEQF+KILKYIRSGV+ GA LETGG+R G
Sbjct: 356 FIEKAKARALKRAVGDPFKGGIEQGPQIDSEQFQKILKYIRSGVESGATLETGGDRFGNS 415
Query: 423 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
G+YI+PTVF+ VKDDMLIAK+EIFGPVQSILK+K
Sbjct: 416 GFYIQPTVFSNVKDDMLIAKEEIFGPVQSILKFK 449
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224064707|ref|XP_002301540.1| predicted protein [Populus trichocarpa] gi|222843266|gb|EEE80813.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 746 bits (1926), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/458 (77%), Positives = 398/458 (86%), Gaps = 10/458 (2%)
Query: 1 MAARRIPLLLSRSFTSSS--PTLFSRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPIT 58
MAA++I +LSRSF+S++ P FSR R S S ++ AA EDPIT
Sbjct: 1 MAAKKISTVLSRSFSSAAAPPCFFSRVR--------GGGGQSRLISRYNTTLAAVEDPIT 52
Query: 59 PPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDE 118
PPV V Y QLLINGQFVD+ASGKTFPTLDPRTG+VI HVAEG+ EDVNRAVSAARKAFDE
Sbjct: 53 PPVSVKYNQLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDVEDVNRAVSAARKAFDE 112
Query: 119 GPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA 178
GPWPRMTAYERS+II RFADLLE+H DEIAALETWDNGKP+EQSA+ E+PMT R+FRYYA
Sbjct: 113 GPWPRMTAYERSRIIWRFADLLEKHTDEIAALETWDNGKPYEQSAKIEIPMTVRIFRYYA 172
Query: 179 GWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 238
GWADKI GLT PADGPYHVQTLHEPIGVAGQIIPWNFP+LMF+WKVGPALACGNT+V+KT
Sbjct: 173 GWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPMLMFSWKVGPALACGNTVVIKT 232
Query: 239 AEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 298
AEQTPLSA+Y +KL HEAGLP GVLN+VSG+GPTAGAALASHM+VDKLAFTGST TGKIV
Sbjct: 233 AEQTPLSAVYAAKLFHEAGLPDGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIV 292
Query: 299 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 358
L+LA+KSNLKPVTLELGGKSPFIVCEDADVD+A EL+H A+FFNQGQCCCAGSRTFVHE
Sbjct: 293 LELASKSNLKPVTLELGGKSPFIVCEDADVDQAVELSHSAVFFNQGQCCCAGSRTFVHER 352
Query: 359 VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER 418
VYD+FVEKA A A +R VGDPFK GI+QGPQ+DS+QFEKIL+ IRSGV+ GA L+ GG+R
Sbjct: 353 VYDEFVEKAKARANQRAVGDPFKEGIEQGPQVDSDQFEKILRIIRSGVESGANLKAGGDR 412
Query: 419 LGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
G GYYI+PTVF+ V+DDMLIAK+EIFGPVQSI K+K
Sbjct: 413 FGTTGYYIQPTVFSDVQDDMLIAKEEIFGPVQSIFKFK 450
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|223452696|gb|ACM89738.1| mitochondrial benzaldehyde dehydrogenase [Antirrhinum majus] | Back alignment and taxonomy information |
|---|
Score = 742 bits (1916), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/456 (77%), Positives = 394/456 (86%), Gaps = 12/456 (2%)
Query: 1 MAARRIPLLLSRSFTSSSPTLFSRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITPP 60
MAA R LLSRS P L G+ S L R Y ++AAAA E+PI PP
Sbjct: 1 MAAHRFSSLLSRSV----PLLSRGGKQSYLGRGV--------YRYGTAAAAALEEPIKPP 48
Query: 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP 120
V V Y +LLINGQFVD+ASGKTFPTLDPR+G+VI HVAEG+AED+NRAV+AARKAFDEGP
Sbjct: 49 VSVQYDKLLINGQFVDAASGKTFPTLDPRSGEVIAHVAEGDAEDINRAVAAARKAFDEGP 108
Query: 121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
WP+M AYER KI+LRFADL+E+HNDE+AALE WD+GKP+EQ AQ E+PM RLFRYYAGW
Sbjct: 109 WPKMPAYERQKIMLRFADLVEKHNDEVAALEAWDSGKPYEQCAQVEIPMFVRLFRYYAGW 168
Query: 181 ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 240
ADKI GLT PADGP+HVQTLHEPIGVAGQIIPWNFPL+MF WKVGPALACGN++VLKTAE
Sbjct: 169 ADKIHGLTIPADGPHHVQTLHEPIGVAGQIIPWNFPLVMFGWKVGPALACGNSVVLKTAE 228
Query: 241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
QTPLSAL VSKL HEAGLP GVLNIVSG+GPTAGAAL HM+VDKLAFTGST TGKIVL+
Sbjct: 229 QTPLSALLVSKLFHEAGLPEGVLNIVSGFGPTAGAALCRHMDVDKLAFTGSTETGKIVLE 288
Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
L+AKSNLKPVTLELGGKSPFIVCEDADVDKA ELAH+ALFFNQGQCCCAGSRTFVHE VY
Sbjct: 289 LSAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHEKVY 348
Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 420
D+FVEKA A A+KR VGDPFK G++QGPQ+D++QFEKILKYIRSG + GA LETGG+RLG
Sbjct: 349 DEFVEKAKARALKRTVGDPFKAGMEQGPQVDADQFEKILKYIRSGAESGATLETGGDRLG 408
Query: 421 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
KGYYI+PTVF+ VKDDMLIAKDEIFGPVQ+ILK+K
Sbjct: 409 TKGYYIQPTVFSDVKDDMLIAKDEIFGPVQTILKFK 444
|
Source: Antirrhinum majus Species: Antirrhinum majus Genus: Antirrhinum Family: Plantaginaceae Order: Lamiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356567618|ref|XP_003552014.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 737 bits (1903), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/416 (82%), Positives = 385/416 (92%), Gaps = 3/416 (0%)
Query: 41 CGYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEG 100
C YST+S A E+P+ P V+V++TQLLI+G+FVD+ASGKTFPTLDPRTG+VI HVAEG
Sbjct: 34 CKYSTSS---AIEEEPVKPSVQVEHTQLLIDGKFVDAASGKTFPTLDPRTGEVIAHVAEG 90
Query: 101 EAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE 160
+EDV+RAV+AARKAFD GPWP+MTAYER +I+LR ADLLE+HNDE+AALETWDNGKP+E
Sbjct: 91 HSEDVDRAVAAARKAFDHGPWPKMTAYERQRILLRAADLLEKHNDELAALETWDNGKPYE 150
Query: 161 QSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220
Q+A+ EVPM RL RYYAGWADKI GLT PADGPYHVQTLHEPIGVAGQIIPWNFPLLMF
Sbjct: 151 QAAKIEVPMLVRLIRYYAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 210
Query: 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 280
AWKVGPALACGNTIVLKTAEQTPLSALY +KL HEAGLP GVLN+VSG+GPTAGAALASH
Sbjct: 211 AWKVGPALACGNTIVLKTAEQTPLSALYAAKLFHEAGLPAGVLNVVSGFGPTAGAALASH 270
Query: 281 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 340
MEVDKLAFTGST TGK+VL+LAAKSNLKPVTLELGGKSPFIVCEDADVD+A ELAH+ALF
Sbjct: 271 MEVDKLAFTGSTDTGKVVLELAAKSNLKPVTLELGGKSPFIVCEDADVDQAVELAHFALF 330
Query: 341 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 400
FNQGQCCCAGSRTFVHESVYD+FVEKA A A+KRVVGDPFKGGI+QGPQIDS+QFEKIL+
Sbjct: 331 FNQGQCCCAGSRTFVHESVYDEFVEKAKARALKRVVGDPFKGGIEQGPQIDSDQFEKILR 390
Query: 401 YIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
YIRSGV+ GA LETGG++LG KG+YI+PTVF+ VKD MLIA+DEIFGPVQSILK+K
Sbjct: 391 YIRSGVESGATLETGGDKLGNKGFYIQPTVFSNVKDGMLIARDEIFGPVQSILKFK 446
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225424691|ref|XP_002263479.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial [Vitis vinifera] gi|296086543|emb|CBI32132.3| unnamed protein product [Vitis vinifera] gi|426204222|gb|AFY12671.1| mitochondrial aldehyde dehydrogenase 2B8 [Vitis quinquangularis] | Back alignment and taxonomy information |
|---|
Score = 734 bits (1896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/409 (83%), Positives = 378/409 (92%)
Query: 48 SAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNR 107
S AA E+PI P V V+YTQLLINGQFVD+A+GKTF TLDPRTG+VI VAEG+AEDVNR
Sbjct: 40 STAAVVEEPINPSVNVNYTQLLINGQFVDAATGKTFETLDPRTGNVIASVAEGDAEDVNR 99
Query: 108 AVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEV 167
AVSAARKAFDEGPWPRM+ YERSKI+LRFADLLE+HNDEIAALETWDNGKPFEQ+A+ EV
Sbjct: 100 AVSAARKAFDEGPWPRMSPYERSKILLRFADLLEKHNDEIAALETWDNGKPFEQAAKAEV 159
Query: 168 PMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 227
P+ RL RYYAGWADKI GLT PADG + VQTLHEPIGVAGQIIPWNFPLLM+AWK+GPA
Sbjct: 160 PLVIRLMRYYAGWADKIHGLTVPADGLHQVQTLHEPIGVAGQIIPWNFPLLMYAWKIGPA 219
Query: 228 LACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLA 287
LACGNTIVLKTAEQTPLSALY SKLLHEAGLPPGVLN+VSGYGPTAGAALASHM+VDKLA
Sbjct: 220 LACGNTIVLKTAEQTPLSALYASKLLHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLA 279
Query: 288 FTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCC 347
FTGST TGKIVLQLAA+SNLKPVTLELGGKSPFIVCEDA+VD+A ELAH+ALFFNQGQCC
Sbjct: 280 FTGSTATGKIVLQLAARSNLKPVTLELGGKSPFIVCEDANVDEAVELAHFALFFNQGQCC 339
Query: 348 CAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD 407
CAGSRTFVHES+YD+FVEKA A A++R VGDPFK GI+QGPQIDS+QFEKIL+YIRSGV+
Sbjct: 340 CAGSRTFVHESIYDEFVEKAKARALRRTVGDPFKAGIEQGPQIDSDQFEKILRYIRSGVE 399
Query: 408 GGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
GA LETGGER G +G++IKPTVF+ V+D MLIA+DEIFGPVQSILK+K
Sbjct: 400 NGATLETGGERFGKEGFFIKPTVFSNVQDGMLIAQDEIFGPVQSILKFK 448
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356526813|ref|XP_003532011.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 730 bits (1885), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/413 (81%), Positives = 383/413 (92%)
Query: 44 STASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAE 103
S S++AA E+PI P ++V++TQLLI+G+FVD+ASGKTF TLDPRTG+VI HVAEG +E
Sbjct: 34 SKFSTSAAIEEEPIKPSIQVEHTQLLIDGKFVDAASGKTFQTLDPRTGEVIAHVAEGHSE 93
Query: 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163
DV+RAVSAARKAFD GPWP+MTAYER +I+LR ADL+E+HNDE+AALETWDNGKP+EQ+A
Sbjct: 94 DVDRAVSAARKAFDHGPWPKMTAYERQRILLRVADLIEKHNDELAALETWDNGKPYEQAA 153
Query: 164 QTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223
+ EVPM RL RYYAGWADKI GLT PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK
Sbjct: 154 KIEVPMLVRLIRYYAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 213
Query: 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 283
VGPALACGNTIVLKTAEQTPLSALY +KL HEAGLP GVLN+VSG+GPTAGAALASHMEV
Sbjct: 214 VGPALACGNTIVLKTAEQTPLSALYAAKLFHEAGLPAGVLNVVSGFGPTAGAALASHMEV 273
Query: 284 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 343
DKLAFTGST TGK+VL+LAAKSNLKPVTLELGGKSPFIVCEDADVD+A ELAH+ALFFNQ
Sbjct: 274 DKLAFTGSTDTGKVVLELAAKSNLKPVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQ 333
Query: 344 GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 403
GQCCCAGSRTFVHE+VY++FV+KA A A++RVVGDPFKGGI+QGPQIDS+QFEKIL+YIR
Sbjct: 334 GQCCCAGSRTFVHENVYEEFVQKAKARALRRVVGDPFKGGIEQGPQIDSDQFEKILRYIR 393
Query: 404 SGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
SGV+ GA LETGG++LG KG+YI+PTVF+ VKD MLIAKDEIFGPVQSILK+K
Sbjct: 394 SGVESGATLETGGDKLGNKGFYIQPTVFSNVKDGMLIAKDEIFGPVQSILKFK 446
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225452510|ref|XP_002274863.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial [Vitis vinifera] gi|296087691|emb|CBI34947.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 729 bits (1883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/456 (76%), Positives = 396/456 (86%), Gaps = 11/456 (2%)
Query: 1 MAARRIPLLLSRSFTSSSPTLFSRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITPP 60
MAA RI LLS S T++S L S GR S R G S S+A A E+PITPP
Sbjct: 1 MAAPRIFSLLSASSTAAS--LRSFGRYSRWGR---------GSSRFSTAVATEEEPITPP 49
Query: 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP 120
V++DYTQLLING+FVD+ASGKTFPTLDPRTGDVI HVAEGEAED+NRAVSAARKAFDEGP
Sbjct: 50 VQIDYTQLLINGRFVDAASGKTFPTLDPRTGDVIAHVAEGEAEDINRAVSAARKAFDEGP 109
Query: 121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
WP+MT YERS I+ RFADLLE+H EIAALE+WDNGKP+EQ+A E+PM R+FRYYAGW
Sbjct: 110 WPKMTPYERSCILFRFADLLEKHCSEIAALESWDNGKPYEQAANVEIPMVIRVFRYYAGW 169
Query: 181 ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 240
ADKI GLT PADG +HVQTLHEPIGVAGQIIPWNFPLL++ WKVGPALACGNTIVLKTAE
Sbjct: 170 ADKIHGLTVPADGLHHVQTLHEPIGVAGQIIPWNFPLLLYGWKVGPALACGNTIVLKTAE 229
Query: 241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
QTPLSALY SKLL+EAGLPPGVLN+VSG+GPTAGAAL+SHM+VDKLAFTGST TGKIVL
Sbjct: 230 QTPLSALYASKLLYEAGLPPGVLNVVSGFGPTAGAALSSHMDVDKLAFTGSTGTGKIVLG 289
Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
LAAKSNLKPVTLELGGKSPFIVCEDADVDKA EL+H ALF+NQGQ CC+GSRTFVHES+Y
Sbjct: 290 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELSHTALFYNQGQSCCSGSRTFVHESIY 349
Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 420
D+F+EKA A A+KRVVGDPFK G++QGPQIDS+QF KIL YI+SG++ GA LE GGE+
Sbjct: 350 DEFIEKAKARALKRVVGDPFKKGVEQGPQIDSQQFNKILGYIKSGIEAGATLEAGGEKFS 409
Query: 421 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
+KGYYI+PTVF+ V D+MLIAK+EIFGPVQSILK+K
Sbjct: 410 SKGYYIQPTVFSNVHDNMLIAKEEIFGPVQSILKFK 445
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297850852|ref|XP_002893307.1| hypothetical protein ARALYDRAFT_472641 [Arabidopsis lyrata subsp. lyrata] gi|297339149|gb|EFH69566.1| hypothetical protein ARALYDRAFT_472641 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/457 (77%), Positives = 399/457 (87%), Gaps = 14/457 (3%)
Query: 1 MAARRIPLLLSRSFTSSSPTLFS-RGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITP 59
MA+RR+ LLSRSF SSSP+LFS RG + G S+AAAA E+ ITP
Sbjct: 1 MASRRVSSLLSRSFMSSSPSLFSLRGMNR-------------GAQRYSNAAAAVENTITP 47
Query: 60 PVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG 119
PVKV++TQLLI G+FVD+ SGKTFPTLDPR G+VI VAEG+AEDVNRAV+AARKAFDEG
Sbjct: 48 PVKVEHTQLLIGGRFVDAVSGKTFPTLDPRNGEVIAQVAEGDAEDVNRAVAAARKAFDEG 107
Query: 120 PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179
PWPRMTAYERSKI+ RFADL+E+HNDEIAALETWDNGKP+EQS Q EVPM R+FRYYAG
Sbjct: 108 PWPRMTAYERSKILFRFADLIEKHNDEIAALETWDNGKPYEQSVQIEVPMLARVFRYYAG 167
Query: 180 WADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239
WADKI G+T P DGP+HVQTLHEPIGVAGQIIPWNFPLLM +WK+GPALACGNTIVLKTA
Sbjct: 168 WADKIHGMTMPGDGPHHVQTLHEPIGVAGQIIPWNFPLLMLSWKLGPALACGNTIVLKTA 227
Query: 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299
EQTPLSAL V KLLHEAGLP GV+NIVSG+G TAGAA+ASHM+VDK+AFTGST GKI+L
Sbjct: 228 EQTPLSALLVGKLLHEAGLPDGVVNIVSGFGATAGAAIASHMDVDKVAFTGSTDVGKIIL 287
Query: 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
+LA+KSNLK VTLELGGKSPFIVCEDADVD+A ELAH+ALFFNQGQCCCAGSRTFVHE V
Sbjct: 288 ELASKSNLKAVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTFVHERV 347
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 419
YD+FVEKA A A+KR VGDPFK GI+QGPQ+DSEQF+KILKYI+ GV+ GA L+ GG+RL
Sbjct: 348 YDEFVEKAKARALKRNVGDPFKSGIEQGPQVDSEQFKKILKYIKYGVEAGATLQAGGDRL 407
Query: 420 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
G+KGYYI+PTVF+ VKDDMLIA DEIFGPVQ+ILK+K
Sbjct: 408 GSKGYYIQPTVFSDVKDDMLIATDEIFGPVQTILKFK 444
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449440686|ref|XP_004138115.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/410 (81%), Positives = 382/410 (93%)
Query: 47 SSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVN 106
S++A A E+ ITPPV+++YTQ LINGQFVDSASGKTFPT DPRTG+VI HVAEG+AEDVN
Sbjct: 49 STSALAEEELITPPVQINYTQNLINGQFVDSASGKTFPTYDPRTGEVIAHVAEGDAEDVN 108
Query: 107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTE 166
RAVSAARKAFDEGPWPRM+AYERS+I+LRFADL+E+H E++ALETW+NGKP+EQS ++E
Sbjct: 109 RAVSAARKAFDEGPWPRMSAYERSRILLRFADLIEKHTPELSALETWNNGKPYEQSLKSE 168
Query: 167 VPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 226
+P+ RLF YYAGWADKI GLT PADG +HVQ LHEPIGVAGQIIPWNFPL+MFAWKVGP
Sbjct: 169 LPLLVRLFHYYAGWADKIHGLTVPADGNHHVQVLHEPIGVAGQIIPWNFPLIMFAWKVGP 228
Query: 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKL 286
ALACGNT+VLKTAEQTPL+ALYV+KLLHEAGLPPGVLNIVSGYGPTAGAALASHM+VDKL
Sbjct: 229 ALACGNTVVLKTAEQTPLTALYVAKLLHEAGLPPGVLNIVSGYGPTAGAALASHMDVDKL 288
Query: 287 AFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQC 346
AFTGST+TGK+VL+LAAKSNLKPVTLELGGKSPFIVCEDADVDKA ELAH+ALFFNQGQC
Sbjct: 289 AFTGSTSTGKVVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQC 348
Query: 347 CCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV 406
CCAGSRTFVHE V+++FVEK+ A A +RVVGDPFK G++QGPQIDS+QFEK+L+YI+SG+
Sbjct: 349 CCAGSRTFVHERVHEEFVEKSKARAQRRVVGDPFKKGVEQGPQIDSDQFEKVLRYIKSGI 408
Query: 407 DGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
+ A LE GG RLG+KGY+I+PTVF+ VKDDMLIAKDEIFGPVQSILK+K
Sbjct: 409 ESNATLECGGGRLGSKGYFIEPTVFSNVKDDMLIAKDEIFGPVQSILKFK 458
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 456 | ||||||
| TAIR|locus:2034855 | 534 | ALDH2B7 "AT1G23800" [Arabidops | 0.971 | 0.829 | 0.752 | 1.5e-186 | |
| TAIR|locus:2097845 | 538 | ALDH2B4 "AT3G48000" [Arabidops | 0.978 | 0.828 | 0.736 | 7.6e-183 | |
| UNIPROTKB|Q2XQV4 | 521 | ALDH2 "Aldehyde dehydrogenase, | 0.866 | 0.758 | 0.616 | 9.3e-130 | |
| UNIPROTKB|P20000 | 520 | ALDH2 "Aldehyde dehydrogenase, | 0.866 | 0.759 | 0.611 | 3.2e-129 | |
| UNIPROTKB|E2RHQ0 | 449 | ALDH1B1 "Uncharacterized prote | 0.877 | 0.890 | 0.597 | 4e-129 | |
| RGD|1306737 | 519 | Aldh1b1 "aldehyde dehydrogenas | 0.879 | 0.772 | 0.600 | 1.1e-128 | |
| UNIPROTKB|P30837 | 517 | ALDH1B1 "Aldehyde dehydrogenas | 0.877 | 0.773 | 0.594 | 1.4e-128 | |
| UNIPROTKB|F1ST54 | 517 | ALDH1B1 "Uncharacterized prote | 0.877 | 0.773 | 0.597 | 3.6e-128 | |
| UNIPROTKB|F1PBJ8 | 521 | ALDH2 "Uncharacterized protein | 0.866 | 0.758 | 0.611 | 1.2e-127 | |
| MGI|MGI:1919785 | 519 | Aldh1b1 "aldehyde dehydrogenas | 0.879 | 0.772 | 0.593 | 1.6e-127 |
| TAIR|locus:2034855 ALDH2B7 "AT1G23800" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1809 (641.9 bits), Expect = 1.5e-186, P = 1.5e-186
Identities = 344/457 (75%), Positives = 392/457 (85%)
Query: 1 MAARRIPLLLSRSFTSSSPTLFS-RGRDSSLCRXXXXXXXXXXXXXXXXXXXXXEDPITP 59
MA+RR+ LLSRSF SSS ++FS RG + R E+ ITP
Sbjct: 1 MASRRVSSLLSRSFMSSSRSIFSLRGMNRGAQRYSNLAAAV-------------ENTITP 47
Query: 60 PVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG 119
PVKV++TQLLI G+FVD+ SGKTFPTLDPR G+VI V+EG+AEDVNRAV+AARKAFDEG
Sbjct: 48 PVKVEHTQLLIGGRFVDAVSGKTFPTLDPRNGEVIAQVSEGDAEDVNRAVAAARKAFDEG 107
Query: 120 PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179
PWP+MTAYERSKI+ RFADL+E+HNDEIAALETWDNGKP+EQSAQ EVPM R+FRYYAG
Sbjct: 108 PWPKMTAYERSKILFRFADLIEKHNDEIAALETWDNGKPYEQSAQIEVPMLARVFRYYAG 167
Query: 180 WADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239
WADKI G+T P DGP+HVQTLHEPIGVAGQIIPWNFPLLM +WK+GPALACGNT+VLKTA
Sbjct: 168 WADKIHGMTMPGDGPHHVQTLHEPIGVAGQIIPWNFPLLMLSWKLGPALACGNTVVLKTA 227
Query: 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299
EQTPLSAL V KLLHEAGLP GV+NIVSG+G TAGAA+ASHM+VDK+AFTGST GKI+L
Sbjct: 228 EQTPLSALLVGKLLHEAGLPDGVVNIVSGFGATAGAAIASHMDVDKVAFTGSTDVGKIIL 287
Query: 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
+LA+KSNLK VTLELGGKSPFIVCEDADVD+A ELAH+ALFFNQGQCCCAGSRTFVHE V
Sbjct: 288 ELASKSNLKAVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTFVHERV 347
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 419
YD+FVEKA A A+KR VGDPFK GI+QGPQ+DSEQF KILKYI+ GV+ GA L+ GG+RL
Sbjct: 348 YDEFVEKAKARALKRNVGDPFKSGIEQGPQVDSEQFNKILKYIKHGVEAGATLQAGGDRL 407
Query: 420 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
G+KGYYI+PTVF+ VKDDMLIA DEIFGPVQ+ILK+K
Sbjct: 408 GSKGYYIQPTVFSDVKDDMLIATDEIFGPVQTILKFK 444
|
|
| TAIR|locus:2097845 ALDH2B4 "AT3G48000" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1774 (629.5 bits), Expect = 7.6e-183, P = 7.6e-183
Identities = 336/456 (73%), Positives = 387/456 (84%)
Query: 1 MAARRIPLLLSRSFTSSSPTLF-SRGRDSSLCRXXXXXXXXXXXXXXXXXXXXXEDPITP 59
MAARR+ LLSRSF++SSP LF S+GR+ C E+ I P
Sbjct: 1 MAARRVSSLLSRSFSASSPLLFRSQGRN---C------YNGGILRRFGTSSAAAEEIINP 51
Query: 60 PVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG 119
V+V +TQLLING FVDSASGKTFPTLDPRTG+VI HVAEG+AED+NRAV AAR AFDEG
Sbjct: 52 SVQVSHTQLLINGNFVDSASGKTFPTLDPRTGEVIAHVAEGDAEDINRAVKAARTAFDEG 111
Query: 120 PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179
PWP+M+AYERS+++LRFADL+E+H++E+A+LETWDNGKP++QS E+PM RLFRYYAG
Sbjct: 112 PWPKMSAYERSRVLLRFADLVEKHSEELASLETWDNGKPYQQSLTAEIPMFARLFRYYAG 171
Query: 180 WADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239
WADKI GLT PADG Y V TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA
Sbjct: 172 WADKIHGLTIPADGNYQVHTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 231
Query: 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299
EQTPL+A Y KL EAGLPPGVLNIVSG+G TAGAALASHM+VDKLAFTGST TGK++L
Sbjct: 232 EQTPLTAFYAGKLFLEAGLPPGVLNIVSGFGATAGAALASHMDVDKLAFTGSTDTGKVIL 291
Query: 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
LAA SNLKPVTLELGGKSPFIV EDAD+DKA ELAH+ALFFNQGQCCCAGSRTFVHE V
Sbjct: 292 GLAANSNLKPVTLELGGKSPFIVFEDADIDKAVELAHFALFFNQGQCCCAGSRTFVHEKV 351
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 419
YD+FVEK+ A A+KRVVGDPF+ GI+QGPQID +QFEK++KYI+SG++ A LE GG+++
Sbjct: 352 YDEFVEKSKARALKRVVGDPFRKGIEQGPQIDLKQFEKVMKYIKSGIESNATLECGGDQI 411
Query: 420 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 455
G KGY+I+PTVF+ VKDDMLIA+DEIFGPVQSILK+
Sbjct: 412 GDKGYFIQPTVFSNVKDDMLIAQDEIFGPVQSILKF 447
|
|
| UNIPROTKB|Q2XQV4 ALDH2 "Aldehyde dehydrogenase, mitochondrial" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1273 (453.2 bits), Expect = 9.3e-130, P = 9.3e-130
Identities = 244/396 (61%), Positives = 297/396 (75%)
Query: 62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-P 120
++ Y Q+ IN ++ D+ S KTFPT++P TGDVI HVAEG+ EDV+RAV AAR AF G P
Sbjct: 37 EIFYNQIFINNEWHDAISKKTFPTVNPSTGDVICHVAEGDKEDVDRAVEAARAAFQLGSP 96
Query: 121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
W R+ A +R +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGW
Sbjct: 97 WRRLDASDRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGW 156
Query: 181 ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 240
ADK G T P DG Y T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K +E
Sbjct: 157 ADKYHGKTLPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVSE 216
Query: 241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
QTPL+ALYV+ L+ EAG PPGV+NIV GYGPTAGAA+ASH +VDK+AFTGST G ++
Sbjct: 217 QTPLTALYVANLIKEAGFPPGVVNIVPGYGPTAGAAIASHEDVDKVAFTGSTEVGHLIQV 276
Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
A KSNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCCAGSRTFV E +Y
Sbjct: 277 AAGKSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIY 336
Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 420
+FVE++ A A RVVG+PF +QGPQID QF+KIL YI+SG + GAKL GG
Sbjct: 337 AEFVERSVARARSRVVGNPFDSRTEQGPQIDETQFKKILGYIKSGKEEGAKLLCGGGAAA 396
Query: 421 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
+GY+I+PTVF V+D M IAK+EIFGPV ILK+K
Sbjct: 397 DRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFK 432
|
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| UNIPROTKB|P20000 ALDH2 "Aldehyde dehydrogenase, mitochondrial" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1268 (451.4 bits), Expect = 3.2e-129, P = 3.2e-129
Identities = 242/396 (61%), Positives = 296/396 (74%)
Query: 62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-P 120
+V Y Q+ IN ++ D+ S KTFPT++P TGDVI HVAEG+ DV+RAV AAR AF G P
Sbjct: 36 EVLYNQIFINNEWHDAVSKKTFPTVNPSTGDVICHVAEGDKADVDRAVKAARAAFQLGSP 95
Query: 121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
W RM A ER +++ R ADL+ER +AALET DNGKP+ S ++ M + RYYAGW
Sbjct: 96 WRRMDASERGRLLNRLADLIERDRTYLAALETLDNGKPYIISYLVDLDMVLKCLRYYAGW 155
Query: 181 ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 240
ADK G T P DG Y T HEP+GV GQIIPWNFPLLM AWK+GPALA GN +V+K AE
Sbjct: 156 ADKYHGKTIPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAE 215
Query: 241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
QTPL+ALYV+ L+ EAG PPGV+N++ G+GPTAGAA+ASH +VDK+AFTGST G ++
Sbjct: 216 QTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQV 275
Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
A KSNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQCCCAGSRTFV E +Y
Sbjct: 276 AAGKSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIY 335
Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 420
+FVE++ A A RVVG+PF +QGPQ+D QF+K+L YI+SG + GAKL GG
Sbjct: 336 AEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKVLGYIKSGKEEGAKLLCGGGAAA 395
Query: 421 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
+GY+I+PTVF V+D M IAK+EIFGPV ILK+K
Sbjct: 396 DRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFK 431
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| UNIPROTKB|E2RHQ0 ALDH1B1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1267 (451.1 bits), Expect = 4.0e-129, P = 4.0e-129
Identities = 240/402 (59%), Positives = 303/402 (75%)
Query: 56 PITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKA 115
PI P + Y QL IN ++ D+AS KTFPT++P TG+VI HVAEG+ DV+RAV AAR+A
Sbjct: 31 PILNP-DIRYNQLFINNEWQDAASKKTFPTVNPTTGEVIGHVAEGDRADVDRAVKAAREA 89
Query: 116 FDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLF 174
F G PW RM A ER +++ R ADL+ER +A+LET DNGKPF++S ++ +++
Sbjct: 90 FRLGSPWRRMDASERGRLLNRLADLVERDRVYLASLETLDNGKPFQESYALDLDEVIKVY 149
Query: 175 RYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTI 234
RY+AGWADK G T P DG + T HEP+GV GQIIPWNFPL+M WK+ PALA GNT+
Sbjct: 150 RYFAGWADKWHGKTIPMDGEHFCFTRHEPVGVCGQIIPWNFPLVMQGWKLAPALATGNTV 209
Query: 235 VLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTT 294
V+K AEQTPLSALY++ L+ EAG PPGV+N+V+GYGPTAGAA+A HM++DK+AFTGST
Sbjct: 210 VMKVAEQTPLSALYLASLIKEAGFPPGVVNVVTGYGPTAGAAIARHMDIDKVAFTGSTEV 269
Query: 295 GKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTF 354
G ++ + A SNLK VTLELGGKSP +V DAD++ A H ALFFN GQCCCAGSRTF
Sbjct: 270 GHLIQKAAGDSNLKRVTLELGGKSPSVVLADADMEHAVAQCHEALFFNMGQCCCAGSRTF 329
Query: 355 VHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLET 414
V ES+YD+F+E+ A +R VG+PF+ QQGPQ+D EQFE+IL YIR G GAKL
Sbjct: 330 VQESIYDEFLERTVEKAKQRRVGNPFELDTQQGPQVDKEQFERILNYIRLGQKEGAKLLC 389
Query: 415 GGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
GGER G +G++IKPTVF V+DDM IA++EIFGPVQ + K+K
Sbjct: 390 GGERFGDRGFFIKPTVFGDVQDDMKIAREEIFGPVQPLFKFK 431
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| RGD|1306737 Aldh1b1 "aldehyde dehydrogenase 1 family, member B1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1263 (449.7 bits), Expect = 1.1e-128, P = 1.1e-128
Identities = 242/403 (60%), Positives = 302/403 (74%)
Query: 55 DPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARK 114
+PI P ++ Y QL IN ++ D+ S KTFPT++P TG+VI HVAEG+ DV+ AV AAR+
Sbjct: 29 NPIPNP-EIRYNQLFINNEWHDAVSKKTFPTVNPTTGEVIGHVAEGDRADVDLAVRAARE 87
Query: 115 AFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRL 173
AF G PW RM A ER +++ R ADL+ER +A+LET DNGKPF++S ++ ++
Sbjct: 88 AFRLGSPWRRMDASERGRLLNRLADLVERDRVYLASLETLDNGKPFQESYVLDLDEVIKV 147
Query: 174 FRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 233
+RY AGWADK G T P DG + T HEP+GV GQIIPWNFPL+M WK+ PALA GNT
Sbjct: 148 YRYLAGWADKWHGKTIPMDGEHFCFTRHEPVGVCGQIIPWNFPLVMQGWKLAPALATGNT 207
Query: 234 IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 293
+V+K AEQTPLSALY++ L+ EAG PPGV+NI++GYGPTAGAA+A HM+VDK+AFTGST
Sbjct: 208 VVMKVAEQTPLSALYLASLIKEAGFPPGVVNIITGYGPTAGAAIAQHMDVDKVAFTGSTE 267
Query: 294 TGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRT 353
G ++ + A SNLK VTLELGGKSP IV DAD+D A + H ALFFN GQCCCAGSRT
Sbjct: 268 VGHLIQKAAGDSNLKRVTLELGGKSPSIVLADADMDHAVDQCHEALFFNMGQCCCAGSRT 327
Query: 354 FVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLE 413
FV ES+Y +F+E+ A KR VG+PF+ QQGPQ+D EQFEKIL YIR G GAKL
Sbjct: 328 FVEESIYHEFLERTVEKAKKRKVGNPFELDTQQGPQVDKEQFEKILGYIRLGQKEGAKLL 387
Query: 414 TGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
GGER G +G++IKPTVF V+DDM IA++EIFGPVQ + K+K
Sbjct: 388 CGGERFGERGFFIKPTVFGNVQDDMRIAREEIFGPVQPLFKFK 430
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| UNIPROTKB|P30837 ALDH1B1 "Aldehyde dehydrogenase X, mitochondrial" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1262 (449.3 bits), Expect = 1.4e-128, P = 1.4e-128
Identities = 239/402 (59%), Positives = 303/402 (75%)
Query: 56 PITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKA 115
PI P + Y QL IN ++ D+ S KTFPT++P TG+VI HVAEG+ DV+RAV AAR+A
Sbjct: 28 PILNP-DIPYNQLFINNEWQDAVSKKTFPTVNPTTGEVIGHVAEGDRADVDRAVKAAREA 86
Query: 116 FDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLF 174
F G PW RM A ER +++ ADL+ER +A+LET DNGKPF++S ++ +++
Sbjct: 87 FRLGSPWRRMDASERGRLLNLLADLVERDRVYLASLETLDNGKPFQESYALDLDEVIKVY 146
Query: 175 RYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTI 234
RY+AGWADK G T P DG + T HEP+GV GQIIPWNFPL+M WK+ PALA GNT+
Sbjct: 147 RYFAGWADKWHGKTIPMDGQHFCFTRHEPVGVCGQIIPWNFPLVMQGWKLAPALATGNTV 206
Query: 235 VLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTT 294
V+K AEQTPLSALY++ L+ EAG PPGV+NI++GYGPTAGAA+A H++VDK+AFTGST
Sbjct: 207 VMKVAEQTPLSALYLASLIKEAGFPPGVVNIITGYGPTAGAAIAQHVDVDKVAFTGSTEV 266
Query: 295 GKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTF 354
G ++ + A SNLK VTLELGGKSP IV DAD++ A E H ALFFN GQCCCAGSRTF
Sbjct: 267 GHLIQKAAGDSNLKRVTLELGGKSPSIVLADADMEHAVEQCHEALFFNMGQCCCAGSRTF 326
Query: 355 VHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLET 414
V ES+Y++F+E+ A +R VG+PF+ QQGPQ+D EQFE++L YI+ G GAKL
Sbjct: 327 VEESIYNEFLERTVEKAKQRKVGNPFELDTQQGPQVDKEQFERVLGYIQLGQKEGAKLLC 386
Query: 415 GGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
GGER G +G++IKPTVF GV+DDM IAK+EIFGPVQ + K+K
Sbjct: 387 GGERFGERGFFIKPTVFGGVQDDMRIAKEEIFGPVQPLFKFK 428
|
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| UNIPROTKB|F1ST54 ALDH1B1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1258 (447.9 bits), Expect = 3.6e-128, P = 3.6e-128
Identities = 240/402 (59%), Positives = 302/402 (75%)
Query: 56 PITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKA 115
PI P + Y QL IN ++ D+ S KTF T++P TG+VI HVAEG+ DV+RAV AAR+A
Sbjct: 28 PILNP-DIRYNQLFINNEWQDAVSKKTFQTVNPTTGEVIGHVAEGDQADVDRAVKAAREA 86
Query: 116 FDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLF 174
F G PW RM A ER +++ R ADL+ER +A+LET DNGKPF++S ++ +++
Sbjct: 87 FRLGSPWRRMDASERGRLLNRLADLVERDRVYLASLETLDNGKPFQESYALDLDEVIKVY 146
Query: 175 RYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTI 234
RY+AGWADK G T P DG + T HEP+GV GQIIPWNFPL+M AWK+ PALA GNT+
Sbjct: 147 RYFAGWADKWHGKTIPMDGEHFCFTRHEPVGVCGQIIPWNFPLVMQAWKLAPALATGNTV 206
Query: 235 VLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTT 294
V+K AEQTPLSALY++ L+ E G PPGV+NI++GYGPTAG A+A HM+V+K+AFTGST
Sbjct: 207 VMKVAEQTPLSALYLASLIKEVGFPPGVVNILTGYGPTAGTAIAHHMDVNKVAFTGSTEV 266
Query: 295 GKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTF 354
G ++ + A SNLK VTLELGGKSP IV DAD+D A E H ALFFN GQCCCAGSRTF
Sbjct: 267 GHLIQKAAGDSNLKRVTLELGGKSPSIVLADADMDHAVEQCHEALFFNMGQCCCAGSRTF 326
Query: 355 VHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLET 414
V ES+YD+F+E+ A +R VG+PF+ QQGPQ++ EQFE+IL YI+ G GAKL
Sbjct: 327 VEESIYDEFLERTVEKAKRRKVGNPFELDTQQGPQVNKEQFERILGYIQLGQKEGAKLLC 386
Query: 415 GGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
GGER G +G++IKPTVF GV+DDM IAK+EIFGPVQ + K+K
Sbjct: 387 GGERFGERGFFIKPTVFGGVQDDMRIAKEEIFGPVQPLFKFK 428
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| UNIPROTKB|F1PBJ8 ALDH2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1253 (446.1 bits), Expect = 1.2e-127, P = 1.2e-127
Identities = 242/396 (61%), Positives = 295/396 (74%)
Query: 62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-P 120
+V Y Q+ IN ++ D+ S KTFPT++P TG+VI VAEG+ EDV++AV AAR AF G P
Sbjct: 37 EVFYNQIFINNEWHDAVSKKTFPTINPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSP 96
Query: 121 WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW 180
W RM A +R +++ R ADL+ER +AALET DNGKP+ S ++ M R RYYAGW
Sbjct: 97 WRRMDASDRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLRCLRYYAGW 156
Query: 181 ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 240
ADK G T P DG + T HEP+GV GQIIPWNFPLLM AWK+GPALA GN IV+K AE
Sbjct: 157 ADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVIVMKVAE 216
Query: 241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
QTPL+ALYV+ L+ EAG PPGV+NI+ G+GPTAGAA+ASH +VDK+AFTGST G +V
Sbjct: 217 QTPLTALYVANLIKEAGFPPGVVNIIPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLVQV 276
Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
A SNLK VTLELGGKSP I+ DAD++ A E AH+ALFFNQGQCCCAGSRTFV E VY
Sbjct: 277 AAGNSNLKRVTLELGGKSPNIIMSDADMNWAVEQAHFALFFNQGQCCCAGSRTFVQEDVY 336
Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 420
+FVE++ A A RVVG+PF +QGPQ+D QF+KIL YI+SG + GAKL GG
Sbjct: 337 AEFVERSVARAKSRVVGNPFDSQTEQGPQVDETQFKKILGYIKSGKEEGAKLLCGGGAAA 396
Query: 421 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
+GY+I+PTVF V+D M IAK+EIFGPV ILK+K
Sbjct: 397 DRGYFIQPTVFGDVQDTMTIAKEEIFGPVMQILKFK 432
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| MGI|MGI:1919785 Aldh1b1 "aldehyde dehydrogenase 1 family, member B1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1252 (445.8 bits), Expect = 1.6e-127, P = 1.6e-127
Identities = 239/403 (59%), Positives = 304/403 (75%)
Query: 55 DPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARK 114
+PI P ++ Y +L IN ++ D+ S KTFPT++P TG+VI HVAEG+ DV+ AV AAR+
Sbjct: 29 NPIPNP-EICYNKLFINNEWHDAVSKKTFPTVNPTTGEVIGHVAEGDRADVDLAVKAARE 87
Query: 115 AFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRL 173
AF G PW RM A ER +++ R ADL+ER +A+LET DNGKPF++S ++ ++
Sbjct: 88 AFRLGSPWRRMDASERGRLLNRLADLVERDRVYLASLETLDNGKPFQESYVLDLDEVIKV 147
Query: 174 FRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 233
+RY+AGWADK G T P DG + T HEP+GV GQIIPWNFPL+M WK+ PALA GNT
Sbjct: 148 YRYFAGWADKWHGKTIPMDGEHFCFTRHEPVGVCGQIIPWNFPLVMQGWKLAPALATGNT 207
Query: 234 IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 293
+V+K AEQTPLSALY++ L+ EAG PPGV+NI++GYGPTAGAA+A HM+VDK+AFTGST
Sbjct: 208 VVMKVAEQTPLSALYLASLIKEAGFPPGVVNIITGYGPTAGAAIAQHMDVDKVAFTGSTE 267
Query: 294 TGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRT 353
G ++ + A +SNLK VTLELGGKSP IV DAD++ A + H ALFFN GQCCCAGSRT
Sbjct: 268 VGHLIQKAAGESNLKRVTLELGGKSPSIVLADADMEHAVDQCHEALFFNMGQCCCAGSRT 327
Query: 354 FVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLE 413
FV ES+Y +F+E+ A +R VG+PF+ QQGPQ+D EQFE+IL YIR G GAKL
Sbjct: 328 FVEESIYREFLERTVEKAKQRKVGNPFELDTQQGPQVDKEQFERILGYIRLGQKEGAKLL 387
Query: 414 TGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
GGERLG +G++IKPTVF V+D M IAK+EIFGPVQ + K+K
Sbjct: 388 CGGERLGERGFFIKPTVFGDVQDGMRIAKEEIFGPVQPLFKFK 430
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q25417 | ALDH2_LEITA | 1, ., 2, ., 1, ., 3 | 0.5171 | 0.8859 | 0.8112 | N/A | no |
| P41751 | ALDH_ASPNG | 1, ., 2, ., 1, ., 3 | 0.5235 | 0.8728 | 0.8008 | yes | no |
| Q9SU63 | AL2B4_ARATH | 1, ., 2, ., 1, ., 3 | 0.7434 | 0.9780 | 0.8289 | yes | no |
| O34660 | ALDH4_BACSU | 1, ., 2, ., 1, ., 3 | 0.5205 | 0.8530 | 0.7858 | yes | no |
| Q9CZS1 | AL1B1_MOUSE | 1, ., 2, ., 1, ., 3 | 0.5889 | 0.9078 | 0.7976 | yes | no |
| P30837 | AL1B1_HUMAN | 1, ., 2, ., 1, ., 3 | 0.5865 | 0.9078 | 0.8007 | yes | no |
| P81178 | ALDH2_MESAU | 1, ., 2, ., 1, ., 3 | 0.5970 | 0.8991 | 0.82 | N/A | no |
| P51977 | AL1A1_SHEEP | 1, ., 2, ., 1, ., 3, 6 | 0.5582 | 0.8991 | 0.8183 | N/A | no |
| P46367 | ALDH4_YEAST | 1, ., 2, ., 1, ., 3 | 0.5024 | 0.875 | 0.7687 | yes | no |
| Q5R6B5 | AL1B1_PONAB | 1, ., 2, ., 1, ., 3 | 0.5913 | 0.9078 | 0.8007 | yes | no |
| P08157 | ALDH_EMENI | 1, ., 2, ., 1, ., 3 | 0.5572 | 0.8662 | 0.7947 | yes | no |
| O14293 | YF19_SCHPO | 1, ., 2, ., 1, ., - | 0.5049 | 0.875 | 0.7932 | yes | no |
| Q8HYE4 | AL1A1_MACFA | 1, ., 2, ., 1, ., 3, 6 | 0.5474 | 0.8969 | 0.8163 | N/A | no |
| P20000 | ALDH2_BOVIN | 1, ., 2, ., 1, ., 3 | 0.5961 | 0.9078 | 0.7961 | yes | no |
| Q66HF8 | AL1B1_RAT | 1, ., 2, ., 1, ., 3 | 0.5961 | 0.9078 | 0.7976 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.2.1 | 0.976 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | estExt_fgenesh4_pm.C_LG_II0915 | aldehyde dehydrogenase (NAD+) (EC-1.2.1.3) (541 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | eugene3.00140876 | acetate-CoA ligase (EC-6.2.1.1) (684 aa) | • | • | 0.927 | ||||||
 | gw1.V.4399.1 | hypothetical protein (495 aa) | • | • | • | 0.903 | |||||
 | gw1.I.2279.1 | hypothetical protein (496 aa) | • | • | • | 0.903 | |||||
 | gw1.IX.2836.1 | SubName- Full=Putative uncharacterized protein; (481 aa) | • | • | • | 0.903 | |||||
 | gw1.IX.2840.1 | SubName- Full=Putative uncharacterized protein; (496 aa) | • | • | • | 0.903 | |||||
 | estExt_fgenesh4_pg.C_LG_IV0428 | pyruvate decarboxylase (EC-4.1.1.1) (582 aa) | • | • | 0.902 | ||||||
 | gw1.XI.3391.1 | pyruvate decarboxylase (EC-4.1.1.1) (574 aa) | • | • | 0.902 | ||||||
 | estExt_fgenesh4_pm.C_LG_XVI0442 | pyruvate decarboxylase (EC-4.1.1.1) (606 aa) | • | 0.901 | |||||||
 | eugene3.00060891 | pyruvate decarboxylase (EC-4.1.1.1) (606 aa) | • | 0.901 | |||||||
 | gw1.XIV.108.1 | annotation not avaliable (356 aa) | • | 0.899 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 456 | |||
| PLN02466 | 538 | PLN02466, PLN02466, aldehyde dehydrogenase family | 0.0 | |
| cd07142 | 476 | cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen | 0.0 | |
| cd07091 | 476 | cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH | 0.0 | |
| cd07141 | 481 | cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin | 0.0 | |
| PLN02766 | 501 | PLN02766, PLN02766, coniferyl-aldehyde dehydrogena | 0.0 | |
| pfam00171 | 459 | pfam00171, Aldedh, Aldehyde dehydrogenase family | 0.0 | |
| cd07143 | 481 | cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al | 0.0 | |
| cd07144 | 484 | cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi | 1e-180 | |
| cd07112 | 462 | cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+ | 1e-173 | |
| COG1012 | 472 | COG1012, PutA, NAD-dependent aldehyde dehydrogenas | 1e-165 | |
| cd07078 | 432 | cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog | 1e-165 | |
| cd07119 | 482 | cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de | 1e-163 | |
| cd07114 | 457 | cd07114, ALDH_DhaS, Uncharacterized Candidatus pel | 1e-161 | |
| cd07115 | 453 | cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens | 1e-158 | |
| cd07093 | 455 | cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen | 1e-151 | |
| cd07140 | 486 | cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate | 1e-149 | |
| cd07559 | 480 | cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu | 1e-148 | |
| cd07109 | 454 | cd07109, ALDH_AAS00426, Uncharacterized Saccharopo | 1e-144 | |
| cd07103 | 451 | cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina | 1e-142 | |
| PRK13252 | 488 | PRK13252, PRK13252, betaine aldehyde dehydrogenase | 1e-142 | |
| cd07138 | 466 | cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox | 1e-139 | |
| cd07088 | 468 | cd07088, ALDH_LactADH-AldA, Escherichia coli lacta | 1e-138 | |
| cd07117 | 475 | cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo | 1e-136 | |
| cd07090 | 457 | cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy | 1e-134 | |
| cd07118 | 454 | cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos | 1e-134 | |
| cd07139 | 471 | cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo | 1e-133 | |
| PRK13473 | 475 | PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd | 1e-133 | |
| cd07097 | 473 | cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+ | 1e-131 | |
| TIGR01804 | 467 | TIGR01804, BADH, glycine betaine aldehyde dehydrog | 1e-130 | |
| cd07110 | 456 | cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy | 1e-129 | |
| cd07089 | 459 | cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6- | 1e-128 | |
| cd07092 | 450 | cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d | 1e-126 | |
| cd07111 | 480 | cd07111, ALDH_F16, Aldehyde dehydrogenase family 1 | 1e-125 | |
| PLN02467 | 503 | PLN02467, PLN02467, betaine aldehyde dehydrogenase | 1e-123 | |
| cd07116 | 479 | cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD | 1e-122 | |
| TIGR02299 | 488 | TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate | 1e-121 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 1e-120 | |
| PRK09847 | 494 | PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty | 1e-119 | |
| cd07131 | 478 | cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi | 1e-119 | |
| cd07108 | 457 | cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d | 1e-118 | |
| cd07106 | 446 | cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac | 1e-118 | |
| PLN02278 | 498 | PLN02278, PLN02278, succinic semialdehyde dehydrog | 1e-114 | |
| cd07107 | 456 | cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben | 1e-113 | |
| cd07104 | 431 | cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P) | 1e-111 | |
| cd07113 | 477 | cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep | 1e-111 | |
| cd07124 | 512 | cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline- | 1e-111 | |
| cd07149 | 453 | cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi | 1e-109 | |
| cd07086 | 478 | cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha | 1e-107 | |
| cd07150 | 451 | cd07150, ALDH_VaniDH_like, Pseudomonas putida vani | 1e-106 | |
| cd07145 | 456 | cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu | 1e-103 | |
| TIGR01780 | 448 | TIGR01780, SSADH, succinate-semialdehyde dehydroge | 1e-103 | |
| TIGR03216 | 481 | TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia | 1e-103 | |
| cd07151 | 465 | cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb | 2e-98 | |
| PRK03137 | 514 | PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy | 2e-97 | |
| cd07099 | 453 | cd07099, ALDH_DDALDH, Methylomonas sp | 7e-97 | |
| cd07085 | 478 | cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd | 5e-94 | |
| PRK09407 | 524 | PRK09407, gabD2, succinic semialdehyde dehydrogena | 1e-93 | |
| PRK11241 | 482 | PRK11241, gabD, succinate-semialdehyde dehydrogena | 3e-93 | |
| cd07100 | 429 | cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul | 1e-91 | |
| cd07105 | 432 | cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena | 3e-91 | |
| TIGR03374 | 472 | TIGR03374, ABALDH, 1-pyrroline dehydrogenase | 4e-91 | |
| cd07152 | 443 | cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde | 6e-91 | |
| cd07120 | 455 | cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al | 5e-90 | |
| cd07082 | 473 | cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph | 2e-88 | |
| PRK10090 | 409 | PRK10090, PRK10090, aldehyde dehydrogenase A; Prov | 5e-87 | |
| cd07101 | 454 | cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul | 1e-86 | |
| cd07094 | 453 | cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA | 2e-86 | |
| cd07102 | 452 | cd07102, ALDH_EDX86601, Uncharacterized aldehyde d | 8e-86 | |
| cd07146 | 451 | cd07146, ALDH_PhpJ, Streptomyces putative phosphon | 8e-86 | |
| TIGR04284 | 480 | TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, | 2e-84 | |
| cd07147 | 452 | cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f | 4e-78 | |
| TIGR01237 | 511 | TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb | 3e-77 | |
| cd07098 | 465 | cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil | 3e-76 | |
| cd07130 | 474 | cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin | 9e-74 | |
| cd07083 | 500 | cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent | 5e-70 | |
| PRK09406 | 457 | PRK09406, gabD1, succinic semialdehyde dehydrogena | 1e-66 | |
| TIGR03250 | 472 | TIGR03250, PhnAcAld_DH, putative phosphonoacetalde | 3e-66 | |
| cd07125 | 518 | cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car | 1e-63 | |
| TIGR01722 | 477 | TIGR01722, MMSDH, methylmalonic acid semialdehyde | 2e-62 | |
| cd07095 | 431 | cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem | 5e-62 | |
| cd07087 | 426 | cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: | 3e-61 | |
| cd07134 | 433 | cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy | 1e-57 | |
| TIGR01238 | 500 | TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb | 2e-55 | |
| cd07133 | 434 | cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd | 4e-55 | |
| PRK09457 | 487 | PRK09457, astD, succinylglutamic semialdehyde dehy | 5e-54 | |
| COG4230 | 769 | COG4230, COG4230, Delta 1-pyrroline-5-carboxylate | 6e-54 | |
| PRK11904 | 1038 | PRK11904, PRK11904, bifunctional proline dehydroge | 3e-53 | |
| cd07136 | 449 | cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh | 6e-53 | |
| cd07135 | 436 | cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia | 5e-52 | |
| PRK11905 | 1208 | PRK11905, PRK11905, bifunctional proline dehydroge | 6e-52 | |
| cd07148 | 455 | cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031 | 1e-50 | |
| PLN02419 | 604 | PLN02419, PLN02419, methylmalonate-semialdehyde de | 2e-49 | |
| TIGR03240 | 484 | TIGR03240, arg_catab_astD, succinylglutamic semial | 6e-49 | |
| PLN02315 | 508 | PLN02315, PLN02315, aldehyde dehydrogenase family | 3e-47 | |
| PLN00412 | 496 | PLN00412, PLN00412, NADP-dependent glyceraldehyde- | 3e-47 | |
| cd07123 | 522 | cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca | 3e-44 | |
| PTZ00381 | 493 | PTZ00381, PTZ00381, aldehyde dehydrogenase family | 6e-44 | |
| TIGR01236 | 532 | TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb | 1e-42 | |
| PRK13968 | 462 | PRK13968, PRK13968, putative succinate semialdehyd | 2e-42 | |
| cd07132 | 443 | cd07132, ALDH_F3AB, Aldehyde dehydrogenase family | 3e-41 | |
| PRK11809 | 1318 | PRK11809, putA, trifunctional transcriptional regu | 4e-38 | |
| cd07137 | 432 | cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase | 3e-33 | |
| cd07084 | 442 | cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+ | 3e-31 | |
| PLN02174 | 484 | PLN02174, PLN02174, aldehyde dehydrogenase family | 1e-25 | |
| PRK11903 | 521 | PRK11903, PRK11903, aldehyde dehydrogenase; Provis | 3e-22 | |
| PLN02203 | 484 | PLN02203, PLN02203, aldehyde dehydrogenase | 4e-21 | |
| cd07128 | 513 | cd07128, ALDH_MaoC-N, N-terminal domain of the mon | 2e-19 | |
| cd07126 | 489 | cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carb | 2e-16 | |
| TIGR02278 | 663 | TIGR02278, PaaN-DH, phenylacetic acid degradation | 2e-15 | |
| cd07129 | 454 | cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh | 3e-14 | |
| cd07077 | 397 | cd07077, ALDH-like, NAD(P)+-dependent aldehyde deh | 3e-13 | |
| PRK11563 | 675 | PRK11563, PRK11563, bifunctional aldehyde dehydrog | 2e-11 | |
| cd07121 | 429 | cd07121, ALDH_EutE, Ethanolamine utilization prote | 5e-06 | |
| cd07081 | 439 | cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acyla | 1e-05 | |
| cd07122 | 436 | cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldeh | 3e-04 | |
| PRK15398 | 465 | PRK15398, PRK15398, aldehyde dehydrogenase EutE; P | 4e-04 | |
| TIGR02288 | 551 | TIGR02288, PaaN_2, phenylacetic acid degradation p | 0.004 |
| >gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Score = 888 bits (2297), Expect = 0.0
Identities = 374/457 (81%), Positives = 413/457 (90%), Gaps = 10/457 (2%)
Query: 1 MAARRIPLLLSRSFTSSSPTLF-SRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITP 59
MAARRI LLSRS ++SS L SRGR+ R G S+AAAA E+PITP
Sbjct: 1 MAARRISSLLSRSLSASSSALLRSRGRNGGRGR---------GIRRFSTAAAAVEEPITP 51
Query: 60 PVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG 119
PV+V YTQLLINGQFVD+ASGKTFPTLDPRTG+VI HVAEG+AEDVNRAV+AARKAFDEG
Sbjct: 52 PVQVSYTQLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEG 111
Query: 120 PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179
PWP+MTAYERS+I+LRFADLLE+HNDE+AALETWDNGKP+EQSA+ E+PM RLFRYYAG
Sbjct: 112 PWPKMTAYERSRILLRFADLLEKHNDELAALETWDNGKPYEQSAKAELPMFARLFRYYAG 171
Query: 180 WADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239
WADKI GLT PADGP+HVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA
Sbjct: 172 WADKIHGLTVPADGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 231
Query: 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299
EQTPLSALY +KLLHEAGLPPGVLN+VSG+GPTAGAALASHM+VDKLAFTGST TGKIVL
Sbjct: 232 EQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVL 291
Query: 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
+LAAKSNLKPVTLELGGKSPFIVCEDADVDKA ELAH+ALFFNQGQCCCAGSRTFVHE V
Sbjct: 292 ELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERV 351
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 419
YD+FVEKA A A+KRVVGDPFK G++QGPQIDSEQFEKIL+YI+SGV+ GA LE GG+R
Sbjct: 352 YDEFVEKAKARALKRVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRF 411
Query: 420 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
G+KGYYI+PTVF+ V+DDMLIA+DEIFGPVQSILK+K
Sbjct: 412 GSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFK 448
|
Length = 538 |
| >gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Score = 773 bits (1997), Expect = 0.0
Identities = 315/394 (79%), Positives = 356/394 (90%)
Query: 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP 122
V +T+L INGQFVD+ASGKTFPT+DPR G+VI HVAEG+AEDV+RAV AARKAFDEGPWP
Sbjct: 1 VKHTKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWP 60
Query: 123 RMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWAD 182
RMT YERS+I+LRFADLLE+H DE+AALETWDNGKP+EQ+ EVP+ RLFRYYAGWAD
Sbjct: 61 RMTGYERSRILLRFADLLEKHADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWAD 120
Query: 183 KIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242
KI G+T PADGP+HV TLHEPIGV GQIIPWNFPLLMFAWKVGPALACGNTIVLK AEQT
Sbjct: 121 KIHGMTLPADGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQT 180
Query: 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
PLSAL +KL EAGLP GVLNIV+G+GPTAGAA+ASHM+VDK+AFTGST GKI++QLA
Sbjct: 181 PLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLA 240
Query: 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 362
AKSNLKPVTLELGGKSPFIVCEDADVDKA ELAH+ALFFNQGQCCCAGSRTFVHES+YD+
Sbjct: 241 AKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDE 300
Query: 363 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 422
FVEKA A A+KRVVGDPF+ G++QGPQ+D EQFEKIL YI G + GA L TGG+R+G+K
Sbjct: 301 FVEKAKARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSK 360
Query: 423 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
GYYI+PT+F+ VKDDM IA+DEIFGPVQSILK+K
Sbjct: 361 GYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFK 394
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476 |
| >gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Score = 695 bits (1795), Expect = 0.0
Identities = 255/391 (65%), Positives = 307/391 (78%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
T L IN +FVDS SGKTFPT++P T +VI VAE + EDV+ AV AAR AF+ G W +M
Sbjct: 4 TGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMD 63
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
ER +++ + ADL+ER DE+AALE+ DNGKP E+SA+ +V ++ + RYYAGWADKIQ
Sbjct: 64 PRERGRLLNKLADLIERDRDELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQ 123
Query: 186 GLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
G T P DG + T EPIGV GQIIPWNFPLLM AWK+ PALA GNT+VLK AEQTPLS
Sbjct: 124 GKTIPIDGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLS 183
Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
ALY+++L+ EAG PPGV+NIV G+GPTAGAA++SHM+VDK+AFTGST G+ +++ AAKS
Sbjct: 184 ALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAKS 243
Query: 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365
NLK VTLELGGKSP IV +DAD+DKA E A + +FFNQGQCCCAGSR FV ES+YD+FVE
Sbjct: 244 NLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVE 303
Query: 366 KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYY 425
K A A KRVVGDPF QGPQ+ QF+KIL YI SG GA L TGGER G+KGY+
Sbjct: 304 KFKARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYF 363
Query: 426 IKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
I+PTVFT VKDDM IAK+EIFGPV +ILK+K
Sbjct: 364 IQPTVFTDVKDDMKIAKEEIFGPVVTILKFK 394
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476 |
| >gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Score = 657 bits (1698), Expect = 0.0
Identities = 247/397 (62%), Positives = 304/397 (76%), Gaps = 1/397 (0%)
Query: 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG- 119
++ YT++ IN ++ DS SGKTFPT++P TG+ I V EG+ DV++AV AAR AF G
Sbjct: 2 PEIKYTKIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGS 61
Query: 120 PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179
PW M A ER +++ + ADL+ER +A+LET DNGKPF +S ++P ++ RYYAG
Sbjct: 62 PWRTMDASERGRLLNKLADLIERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAG 121
Query: 180 WADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239
WADKI G T P DG + T HEP+GV GQIIPWNFPLLM AWK+ PALACGNT+VLK A
Sbjct: 122 WADKIHGKTIPMDGDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPA 181
Query: 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299
EQTPL+ALY++ L+ EAG PPGV+N+V GYGPTAGAA++SH ++DK+AFTGST GK++
Sbjct: 182 EQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQ 241
Query: 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
Q A KSNLK VTLELGGKSP IV DAD+D A E AH ALFFN GQCCCAGSRTFV ES+
Sbjct: 242 QAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESI 301
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 419
YD+FV+++ A KRVVG+PF +QGPQID EQF+KIL+ I SG GAKLE GG+R
Sbjct: 302 YDEFVKRSVERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRH 361
Query: 420 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
G KGY+I+PTVF+ V DDM IAK+EIFGPVQ I K+K
Sbjct: 362 GDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFK 398
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481 |
| >gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 562 bits (1449), Expect = 0.0
Identities = 228/395 (57%), Positives = 291/395 (73%)
Query: 62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPW 121
++ +T+L ING+FVD+ASGKTF T DPRTG+VI +AEG+ EDV+ AV AAR+AFD GPW
Sbjct: 17 EIKFTKLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPW 76
Query: 122 PRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA 181
PRM+ +ER +I+++FADL+E H +E+AAL+T D GK F ++P L RYYAG A
Sbjct: 77 PRMSGFERGRIMMKFADLIEEHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAA 136
Query: 182 DKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
DKI G T TL EPIGV G IIPWNFP MF KV PALA G T+V+K AEQ
Sbjct: 137 DKIHGETLKMSRQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQ 196
Query: 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
TPLSAL+ + L AG+P GV+N+V+G+GPTAGAA+ASHM+VDK++FTGST G+ ++Q
Sbjct: 197 TPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQA 256
Query: 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
AA SNLK V+LELGGKSP ++ +DADVD A +LA +F+N+G+ C A SR +V E +YD
Sbjct: 257 AATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYD 316
Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 421
+FV+K A VVGDPF +QGPQ+D +QFEKIL YI G GA L TGG+ G
Sbjct: 317 EFVKKLVEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGD 376
Query: 422 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
KGYYI+PT+FT V +DM IA+DEIFGPV S++K+K
Sbjct: 377 KGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFK 411
|
Length = 501 |
| >gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 531 bits (1370), Expect = 0.0
Identities = 197/383 (51%), Positives = 251/383 (65%), Gaps = 5/383 (1%)
Query: 74 FVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKII 133
+VDS S +T ++P TG+VI V AEDV+ AV+AAR AF W + ER+ I+
Sbjct: 1 WVDS-SSETIEVINPATGEVIATVPAATAEDVDAAVAAARAAFKA--WAKTPPSERAAIL 57
Query: 134 LRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADG 193
L+ ADLLE DE+A LET + GKP + A+ EVP RYYAG A K++G T P+D
Sbjct: 58 LKAADLLEERRDELAELETLETGKPLAE-ARGEVPRAIDTLRYYAGLARKLEGETLPSDP 116
Query: 194 PYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLL 253
T EP+GV G I PWNFPLL+ AWK+ PALA GNT+VLK +E TPL+AL +++L
Sbjct: 117 GVLAYTRREPLGVVGAITPWNFPLLLAAWKIAPALAAGNTVVLKPSELTPLTALLLAELF 176
Query: 254 HEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLE 313
EAGLPPGVLN+V+G G G AL H +VDK++FTGST G+ + + AAK NLK VTLE
Sbjct: 177 EEAGLPPGVLNVVTGSGSEVGDALVEHPDVDKVSFTGSTEVGRRIAKAAAK-NLKRVTLE 235
Query: 314 LGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK 373
LGGK+P IV +DAD+D A E A + F N GQ C AGSR VHES+YD+FVE+ A
Sbjct: 236 LGGKNPLIVFDDADLDAAVEGAVFGAFGNAGQVCTAGSRLLVHESIYDEFVERLVEAAKS 295
Query: 374 RVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTG 433
VGDP GP I +Q E++L YI + GAKL GGE KGY+++PTV
Sbjct: 296 LKVGDPLDPDTDIGPLISKKQRERVLSYIEDAKEEGAKLLCGGEAGLEKGYFVEPTVLAD 355
Query: 434 VKDDMLIAKDEIFGPVQSILKYK 456
V DM IA++EIFGPV S++ +K
Sbjct: 356 VTPDMRIAQEEIFGPVLSVIPFK 378
|
This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459 |
| >gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Score = 513 bits (1323), Expect = 0.0
Identities = 213/392 (54%), Positives = 273/392 (69%), Gaps = 2/392 (0%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPR-M 124
T L ING+FVDS G T +P TG +IT +AE DV+ AV A AF E W +
Sbjct: 7 TGLFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAF-ETDWGLKV 65
Query: 125 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184
+ +R + + + ADL+ER+ D +A++E DNGK F + + +V + FRYY GWADKI
Sbjct: 66 SGSKRGRCLSKLADLMERNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKI 125
Query: 185 QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G D T HEPIGV GQIIPWNFPLLM AWK+ PALA GNTIVLK +E TPL
Sbjct: 126 HGQVIETDIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPL 185
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
SALY++KL+ EAG PPGV+N+VSGYG T G A++SHM++DK+AFTGST G+ V++ AAK
Sbjct: 186 SALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAK 245
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
SNLK VTLELGGKSP IV +DAD++ A Y +FFN GQ CCAGSR +V E +YD+FV
Sbjct: 246 SNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFV 305
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 424
++ A K VGDPF QGPQ+ Q+E+I+ YI SG GA +ETGG+R G +GY
Sbjct: 306 KRFKEKAKKLKVGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGY 365
Query: 425 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
+I+PT+FT V +DM I K+EIFGPV +++K+K
Sbjct: 366 FIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFK 397
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481 |
| >gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Score = 513 bits (1322), Expect = e-180
Identities = 207/402 (51%), Positives = 267/402 (66%), Gaps = 9/402 (2%)
Query: 62 KVDYTQ---LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDE 118
Y Q L IN +FV S+ G+T T++P TG+VI V EDV++AV AARKAF E
Sbjct: 1 GKSYDQPTGLFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAF-E 59
Query: 119 GPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA 178
W ++T ER +++ + ADL+E++ D +AA+E D+GKP+ +A ++ + RYYA
Sbjct: 60 SWWSKVTGEERGELLDKLADLVEKNRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYA 119
Query: 179 GWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 238
GWADKIQG T P TLHEP GV GQIIPWN+PL M AWK+ PALA GNT+V+K
Sbjct: 120 GWADKIQGKTIPTSPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKP 179
Query: 239 AEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 298
AE TPLS LY + L+ EAG PPGV+NI+ GYG AG+ALA H +VDK+AFTGST TG++V
Sbjct: 180 AENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLV 239
Query: 299 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES 358
++ AA NLK VTLE GGKSP +V EDAD+D+A + A + +N GQ C A SR +V ES
Sbjct: 240 MKAAA-QNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQES 298
Query: 359 VYDQFVEKANALAMKR-VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE 417
+YD+FVEK + VG PF GPQ+ Q++++L YI G GAKL GGE
Sbjct: 299 IYDKFVEKFVEHVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGE 358
Query: 418 RLG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
+ KGY+I PT+FT V DM I K+EIFGPV I K+K
Sbjct: 359 KAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFK 400
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484 |
| >gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Score = 493 bits (1271), Expect = e-173
Identities = 194/382 (50%), Positives = 255/382 (66%), Gaps = 7/382 (1%)
Query: 80 GKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADL 139
G+TF T++P TG V+ VA +A DV+RAV+AAR+AF+ G W R++ ER ++LR ADL
Sbjct: 1 GETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADL 60
Query: 140 LERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQT 199
+E H DE+A LET D GKP + +VP FR+YA DK+ G AP
Sbjct: 61 IEAHRDELALLETLDMGKPISDALAVDVPSAANTFRWYAEAIDKVYGEVAPT--GPDALA 118
Query: 200 L--HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG 257
L EP+GV G ++PWNFPLLM AWK+ PALA GN++VLK AEQ+PL+AL +++L EAG
Sbjct: 119 LITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELALEAG 178
Query: 258 LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 317
LP GVLN+V G+G TAG AL HM+VD LAFTGST G+ L+ + +SNLK V LE GGK
Sbjct: 179 LPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGK 238
Query: 318 SPFIVCEDA-DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 376
SP IV DA D+D AAE A +F+NQG+ C AGSR VHES+ D+F+EK A A +
Sbjct: 239 SPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKP 298
Query: 377 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL--GAKGYYIKPTVFTGV 434
GDP + G + F+K+L YI SG GA+L GG+R+ G++++PTVF GV
Sbjct: 299 GDPLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGV 358
Query: 435 KDDMLIAKDEIFGPVQSILKYK 456
DM IA++EIFGPV S++ +
Sbjct: 359 TPDMRIAREEIFGPVLSVITFD 380
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462 |
| >gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 474 bits (1223), Expect = e-165
Identities = 197/391 (50%), Positives = 256/391 (65%), Gaps = 8/391 (2%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+LLI+G++VD AS T ++P TG+VI V AEDV+ AV+AAR AF+ W R++
Sbjct: 1 YKLLIDGEWVDGAS--TIEVINPATGEVIATVPAATAEDVDAAVAAARAAFE--AWSRLS 56
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A ER+ I+ R ADLLE +E+AAL T + GKP + A+ E+ RYYA A +++
Sbjct: 57 AEERAAILRRIADLLEARAEELAALITLETGKPISE-ARGEIARAADFIRYYAEEARRLE 115
Query: 186 GLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
G T P D EP+GV G I PWNFPL + AWK+ PALA GNT+VLK +EQTPLS
Sbjct: 116 GETIPTDKGSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLS 175
Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
AL +++L EAGLP GVLN+V+G G G AL +H +VD ++FTGST G+ + AA
Sbjct: 176 ALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAA- 234
Query: 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365
NLKPVTLELGGKSP IV EDAD+D A + A + FFN GQ C A SR VHESVYD+FVE
Sbjct: 235 NLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVE 294
Query: 366 KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYY 425
+ A A VGDP GP I EQ +++ YI V GA+L GG+R G GY+
Sbjct: 295 RLVARAASLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRPG--GYF 352
Query: 426 IKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
++PT+ GV DM IA++EIFGPV ++++K
Sbjct: 353 VEPTILEGVTPDMRIAREEIFGPVLPVIRFK 383
|
Length = 472 |
| >gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 473 bits (1219), Expect = e-165
Identities = 180/353 (50%), Positives = 231/353 (65%), Gaps = 6/353 (1%)
Query: 106 NRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165
+ AV+AAR AF W + ER+ I+ + ADLLE +E+AALET + GKP + A
Sbjct: 1 DAAVAAARAAFKA--WAALPPAERAAILRKLADLLEERREELAALETLETGKP-IEEALG 57
Query: 166 EVPMTTRLFRYYAGWADKIQGLTAPADGPYHV-QTLHEPIGVAGQIIPWNFPLLMFAWKV 224
EV FRYYAG A ++ G P+ P + EP+GV G I PWNFPLL+ AWK+
Sbjct: 58 EVARAADTFRYYAGLARRLHGEVIPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKL 117
Query: 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVD 284
PALA GNT+VLK +E TPL+AL +++LL EAGLPPGVLN+V+G G GAALASH VD
Sbjct: 118 APALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVTGDGDEVGAALASHPRVD 177
Query: 285 KLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 344
K++FTGST GK +++ AA+ NLK VTLELGGKSP IV +DAD+D A + A + F N G
Sbjct: 178 KISFTGSTAVGKAIMRAAAE-NLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAG 236
Query: 345 QCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 404
Q C A SR VHES+YD+FVE+ VG+P GP I + Q +++L YI
Sbjct: 237 QVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIED 296
Query: 405 GVDGGAKLETGGERL-GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
GAKL GG+RL G KGY++ PTV T V DM IA++EIFGPV ++ +K
Sbjct: 297 AKAEGAKLLCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFK 349
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432 |
| >gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 469 bits (1210), Expect = e-163
Identities = 175/391 (44%), Positives = 249/391 (63%), Gaps = 6/391 (1%)
Query: 70 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYER 129
I+G++V++ASGKT ++P G+VI V EG AED RA++AAR+AFD G WP + A ER
Sbjct: 2 IDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQER 61
Query: 130 SKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA 189
+ ++ R AD + +E+A LET + GK +S + ++ FRYYAG A K G
Sbjct: 62 AALLFRIADKIREDAEELARLETLNTGKTLRES-EIDIDDVANCFRYYAGLATKETGEVY 120
Query: 190 PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 249
+T+ EP+GV G I PWN+PLL AWK+ PALA GNT+V+K +E TPL+ + +
Sbjct: 121 DVPPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIAL 180
Query: 250 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKP 309
+L+ EAGLP GV+N+V+G G T GA LA +VD ++FTG T TG+ +++ AA N+K
Sbjct: 181 FELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAG-NVKK 239
Query: 310 VTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANA 369
V LELGGK+P IV DAD + A + A +FFN GQ C AGSR V ES++D+FV
Sbjct: 240 VALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAE 299
Query: 370 LAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYY 425
A K +G+ + GP + +E EK+L YI+ G + GA+L GG+R AKGY+
Sbjct: 300 RAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYF 359
Query: 426 IKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
++PT+F V M I ++EIFGPV ++ ++
Sbjct: 360 VEPTIFDDVDRTMRIVQEEIFGPVLTVERFD 390
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482 |
| >gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Score = 462 bits (1191), Expect = e-161
Identities = 182/378 (48%), Positives = 237/378 (62%), Gaps = 9/378 (2%)
Query: 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
+++P TG+ V E A DV+RAV+AAR AF+ G W ++T ER K++ R ADL+E +
Sbjct: 1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANA 60
Query: 145 DEIAALETWDNGKPF-EQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHE 202
+E+A LET DNGK E AQ V +RYYAG ADKI+G P D G Y T E
Sbjct: 61 EELAELETRDNGKLIRETRAQ--VRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRRE 118
Query: 203 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGV 262
P+GV I PWN PLL+ A K+ PALA GNT+VLK +E TP S L ++KL EAG PPGV
Sbjct: 119 PLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAEEAGFPPGV 178
Query: 263 LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 322
+N+V+G+GP G AL H V K+AFTG T TG+ + + AA+ NL PVTLELGGKSP IV
Sbjct: 179 VNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAE-NLAPVTLELGGKSPNIV 237
Query: 323 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 382
+DAD+D A +F GQ C AGSR V S+YD+FVE+ A A VGDP
Sbjct: 238 FDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDP 297
Query: 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDM 438
Q GP Q EK+ +Y+ + GA++ TGGER GY+ +PT+ V +DM
Sbjct: 298 ETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDM 357
Query: 439 LIAKDEIFGPVQSILKYK 456
IA++E+FGPV S++ +
Sbjct: 358 RIAQEEVFGPVLSVIPFD 375
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457 |
| >gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 454 bits (1170), Expect = e-158
Identities = 191/372 (51%), Positives = 258/372 (69%), Gaps = 3/372 (0%)
Query: 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
TL+P TG++I VA+ AEDV+ AV+AAR AF+ W M ER +I+ R A+L+ +
Sbjct: 1 TLNPATGELIARVAQASAEDVDAAVAAARAAFE--AWSAMDPAERGRILWRLAELILANA 58
Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPI 204
DE+A LE+ D GKP + + +VP FRYYAGWADKI+G P GP+ T+ EP+
Sbjct: 59 DELARLESLDTGKPIRAARRLDVPRAADTFRYYAGWADKIEGEVIPVRGPFLNYTVREPV 118
Query: 205 GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLN 264
GV G I+PWNFPL+ AWKV PALA GNT+VLK AE TPLSAL +++L+ EAG P GVLN
Sbjct: 119 GVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEAGFPAGVLN 178
Query: 265 IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324
+V+G+G AGAAL H +VDK+ FTGST G+ ++Q A NLK V+LELGGKS IV
Sbjct: 179 VVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQ-GAAGNLKRVSLELGGKSANIVFA 237
Query: 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384
DAD+D A A +F+NQGQ C AGSR VHES+YD+F+E+ +LA GDP
Sbjct: 238 DADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKT 297
Query: 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDE 444
Q GP + QF+++L Y+ G + GA+L TGG+R GA+G++++PT+F V +M IA++E
Sbjct: 298 QMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEE 357
Query: 445 IFGPVQSILKYK 456
IFGPV S+++++
Sbjct: 358 IFGPVVSVMRFR 369
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453 |
| >gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Score = 438 bits (1129), Expect = e-151
Identities = 169/369 (45%), Positives = 240/369 (65%), Gaps = 7/369 (1%)
Query: 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
+P TG+V+ V EG A +V+ AV+AA++AF W RM+ ER++I+ + ADL+E
Sbjct: 1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFPG--WSRMSPAERARILHKVADLIEARA 58
Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPI 204
DE+A LE+ D GKP + ++P FR++A + ++ G + P DG L +P+
Sbjct: 59 DELALLESLDTGKPITLARTRDIPRAAANFRFFADYILQLDGESYPQDGGALNYVLRQPV 118
Query: 205 GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLN 264
GVAG I PWN PL++ WK+ PALA GNT+VLK +E TPL+A +++L +EAGLPPGV+N
Sbjct: 119 GVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELANEAGLPPGVVN 178
Query: 265 IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324
+V G+GP AGAAL +H +VD ++FTG T TG+ +++ AA NLKPV+LELGGK+P IV
Sbjct: 179 VVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAP-NLKPVSLELGGKNPNIVFA 237
Query: 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384
DAD+D+A + A + F N G+ C AGSR V S+YD+F+E+ A VGDP
Sbjct: 238 DADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDT 297
Query: 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLI 440
+ GP I E EK+L Y+ GA + TGG R GY+++PTV TG+ +D +
Sbjct: 298 EVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRV 357
Query: 441 AKDEIFGPV 449
A++EIFGPV
Sbjct: 358 AQEEIFGPV 366
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455 |
| >gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Score = 432 bits (1112), Expect = e-149
Identities = 183/395 (46%), Positives = 256/395 (64%), Gaps = 4/395 (1%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
QL ING+FVD+ GKT+ T++P G VI V+ EDV+RAV+AA++AF+ G W +M
Sbjct: 6 HQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMN 65
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A +R +++ R ADL+E H +E+A +E+ D+G + + +T V M+ + FRY+AGW DKIQ
Sbjct: 66 ARDRGRLMYRLADLMEEHQEELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQ 125
Query: 186 GLTAPADG--PYHVQTL--HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
G T P + P TL EPIGV G +IPWN+PL+M AWK+ LA GNT+VLK A+
Sbjct: 126 GKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQV 185
Query: 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
TPL+AL ++L +AG P GV+NI+ G G G L+ H +V KL FTGST GK +++
Sbjct: 186 TPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKS 245
Query: 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
A SNLK V+LELGGKSP I+ D D+DKA + ++FFN+G+ C A R FV ES++D
Sbjct: 246 CAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHD 305
Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 421
+FV + K +GDP GPQ +K+++Y GV GA L GG+++
Sbjct: 306 EFVRRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDR 365
Query: 422 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
G++ +PTVFT V+D M IAK+E FGP+ I K+
Sbjct: 366 PGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFD 400
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486 |
| >gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Score = 431 bits (1111), Expect = e-148
Identities = 178/399 (44%), Positives = 244/399 (61%), Gaps = 13/399 (3%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
ING++V + G+ F +P G V+ + AEDV+ AV AA +AF W + +
Sbjct: 2 DNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFKT--WGKTSV 59
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
ER+ I+ + AD +E + + +A ET DNGKP ++ ++P+ FRY+AG +G
Sbjct: 60 AERANILNKIADRIEENLELLAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEG 119
Query: 187 LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
+ D HEP+GV GQIIPWNFPLLM AWK+ PALA GNT+VLK A QTPLS
Sbjct: 120 SLSEIDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSI 179
Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306
L + +L+ + LP GV+N+V+G+G AG LASH + KLAFTGSTT G++++Q AA+ N
Sbjct: 180 LVLMELIGDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAE-N 237
Query: 307 LKPVTLELGGKSPFIVCEDA-----DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
L PVTLELGGKSP I +DA D D AE FNQG+ C SR V ES+YD
Sbjct: 238 LIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYD 297
Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL-- 419
+F+E+A VG+P G Q+ +Q EKIL Y+ G + GA++ TGGERL
Sbjct: 298 EFIERAVERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTL 357
Query: 420 --GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
KGY+ +PT+ G +DM I ++EIFGPV +++ +K
Sbjct: 358 GGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFK 396
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480 |
| >gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Score = 418 bits (1076), Expect = e-144
Identities = 168/371 (45%), Positives = 227/371 (61%), Gaps = 7/371 (1%)
Query: 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145
DP TG+V +A G A DV+RAV AAR+AF E W R++ ER +++LR A L+ H D
Sbjct: 2 FDPSTGEVFARIARGGAADVDRAVQAARRAF-ESGWLRLSPAERGRLLLRIARLIREHAD 60
Query: 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIG 205
E+A LE+ D GKP Q A+ +V R F YY G ADK+ G T P Y V T+ EP G
Sbjct: 61 ELARLESLDTGKPLTQ-ARADVEAAARYFEYYGGAADKLHGETIPLGPGYFVYTVREPHG 119
Query: 206 VAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNI 265
V G IIPWN+PL + V PALA GN +V+K AE PL+AL +++L EAGLP G LN+
Sbjct: 120 VTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEEAGLPAGALNV 179
Query: 266 VSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED 325
V+G G AGAAL +H VD ++FTGS TG V++ AA+ N+ PVTLELGGKSP IV D
Sbjct: 180 VTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAE-NVVPVTLELGGKSPQIVFAD 238
Query: 326 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 385
AD++ A + A+ N GQ C AGSR VH S+YD+ +E+ VG P
Sbjct: 239 ADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVG-PGLEDPD 297
Query: 386 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL---GAKGYYIKPTVFTGVKDDMLIAK 442
GP I ++Q +++ ++ GA++ GG A GY++ PT+ V D +A+
Sbjct: 298 LGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQ 357
Query: 443 DEIFGPVQSIL 453
+EIFGPV +++
Sbjct: 358 EEIFGPVLAVM 368
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454 |
| >gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Score = 414 bits (1066), Expect = e-142
Identities = 164/372 (44%), Positives = 225/372 (60%), Gaps = 5/372 (1%)
Query: 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145
++P TG+VI V + A D + A+ AA AF W + TA ER+ I+ R+ADL+ +
Sbjct: 2 INPATGEVIGEVPDAGAADADAAIDAAAAAFKT--WRKTTARERAAILRRWADLIRERAE 59
Query: 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYH-VQTLHEPI 204
++A L T + GKP + A+ EV ++A A +I G T P+ P + + +P+
Sbjct: 60 DLARLLTLEQGKPLAE-ARGEVDYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPV 118
Query: 205 GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLN 264
GV I PWNFP M K+ PALA G T+VLK AE+TPLSAL +++L EAGLP GVLN
Sbjct: 119 GVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSALALAELAEEAGLPAGVLN 178
Query: 265 IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324
+V+G G AL + V K++FTGST GK+++ AA +K V+LELGG +PFIV +
Sbjct: 179 VVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAA-DTVKRVSLELGGNAPFIVFD 237
Query: 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384
DAD+DKA + A + F N GQ C +R +VHES+YD+FVEK K VG+ G
Sbjct: 238 DADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGT 297
Query: 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDE 444
GP I+ EK+ + V GAK+ TGG+RLG GY+ +PTV T V DDMLI +E
Sbjct: 298 DMGPLINERAVEKVEALVEDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEE 357
Query: 445 IFGPVQSILKYK 456
FGPV I+ +
Sbjct: 358 TFGPVAPIIPFD 369
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451 |
| >gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 415 bits (1068), Expect = e-142
Identities = 168/393 (42%), Positives = 236/393 (60%), Gaps = 8/393 (2%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
L I+G +V++ SG+TF ++P TG+V+ V DV AV++A++ W MTA
Sbjct: 8 SLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQKI--WAAMTA 65
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
ERS+I+ R D+L NDE+AALET D GKP ++++ ++ + YYAG A ++G
Sbjct: 66 MERSRILRRAVDILRERNDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEG 125
Query: 187 LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
P G V T EP+GV I WN+P+ + WK PALA GN ++ K +E TPL+A
Sbjct: 126 EQIPLRGGSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTA 185
Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306
L ++++ EAGLP GV N+V G G GA L H ++ K++FTG TGK V+ AA S
Sbjct: 186 LKLAEIYTEAGLPDGVFNVVQGDGRV-GAWLTEHPDIAKVSFTGGVPTGKKVMAAAAAS- 243
Query: 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 366
LK VT+ELGGKSP IV +DAD+D+AA++A A F++ GQ C G+R FV +S+ F +
Sbjct: 244 LKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEAR 303
Query: 367 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL----GAK 422
+ +GDP GP + +K+L YI G GA+L GGERL A
Sbjct: 304 LLERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFAN 363
Query: 423 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 455
G ++ PTVFT DDM I ++EIFGPV S+L +
Sbjct: 364 GAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTF 396
|
Length = 488 |
| >gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Score = 407 bits (1049), Expect = e-139
Identities = 166/392 (42%), Positives = 225/392 (57%), Gaps = 12/392 (3%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
I+G +V A +T ++P T +VI V G A DV+RAV+AAR+AF W +
Sbjct: 1 FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFP--AWSATSVE 58
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
ER+ ++ R A+ E DE+A T + G P + +V + R A +
Sbjct: 59 ERAALLERIAEAYEARADELAQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFE 118
Query: 188 TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247
G V + EPIGV G I PWN+PL KV PALA G T+VLK +E PLSA+
Sbjct: 119 ERR--GNSLV--VREPIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSAI 174
Query: 248 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 307
++++L EAGLP GV N+V+G GP G AL++H +VD ++FTGST GK V + AA + +
Sbjct: 175 ILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAADT-V 233
Query: 308 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 367
K V LELGGKS I+ +DAD++KA A F N GQ C A +R V S Y + E A
Sbjct: 234 KRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIA 293
Query: 368 NALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG----ERLGAKG 423
A A VVGDP GP + QF+++ YI+ G++ GA+L GG E L +G
Sbjct: 294 AAAAEAYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGL-ERG 352
Query: 424 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 455
Y++KPTVF V DM IA++EIFGPV SI+ Y
Sbjct: 353 YFVKPTVFADVTPDMTIAREEIFGPVLSIIPY 384
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466 |
| >gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 404 bits (1040), Expect = e-138
Identities = 168/389 (43%), Positives = 236/389 (60%), Gaps = 6/389 (1%)
Query: 70 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYER 129
ING+FV S+SG+T L+P TG+V+ V AED +RAV AA A W R+ A ER
Sbjct: 2 INGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQKA--WERLPAIER 59
Query: 130 SKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA 189
+ + + ADL+ + DE+A L + GK A+ EV T Y A WA +I+G
Sbjct: 60 AAYLRKLADLIRENADELAKLIVEEQGKTLSL-ARVEVEFTADYIDYMAEWARRIEGEII 118
Query: 190 PADGPY-HVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 248
P+D P ++ PIGV I+PWNFP + A K+ PAL GNTIV+K +E+TPL+AL
Sbjct: 119 PSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNALE 178
Query: 249 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLK 308
++L+ EAGLP GVLNIV+G G G AL +H +V ++ TGST G+ +++ AA+ N+
Sbjct: 179 FAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAE-NIT 237
Query: 309 PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKAN 368
V+LELGGK+P IV +DAD+D A + + N GQ C R +VHE +YD+F+EK
Sbjct: 238 KVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLV 297
Query: 369 ALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL-GAKGYYIK 427
VGDPF GP ++ +K+ + + V+ GA L TGG+R G KGY+ +
Sbjct: 298 EKMKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYE 357
Query: 428 PTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
PTV T V+ DM I ++EIFGPV ++K+
Sbjct: 358 PTVLTNVRQDMEIVQEEIFGPVLPVVKFS 386
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468 |
| >gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 399 bits (1028), Expect = e-136
Identities = 175/394 (44%), Positives = 248/394 (62%), Gaps = 8/394 (2%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
L ING++V +SG+T + +P G+ ++ + + DV+RAV AA++AF W + T
Sbjct: 2 GLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFKT--WRKTTV 59
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
ER+ I+ + AD+++ + + +A +ET DNGKP ++ ++P+ FRY+AG +G
Sbjct: 60 AERANILNKIADIIDENKELLAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEG 119
Query: 187 LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
D L EPIGV GQIIPWNFP LM AWK+ PALA GNT+V+K + T LS
Sbjct: 120 SANMIDEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSL 179
Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306
L ++K++ + LP GV+NIV+G G +G L +H +DKLAFTGST G+ V AAK
Sbjct: 180 LELAKIIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAK-K 237
Query: 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 366
L P TLELGGKS I+ +DA+ DKA E A + FNQGQ CCAGSR FV E +YD+FV K
Sbjct: 238 LIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAK 297
Query: 367 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AK 422
VG+P Q G Q++ +Q +KIL Y+ + GAK+ TGG RL K
Sbjct: 298 LKEKFENVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDK 357
Query: 423 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
G++I+PT+ V +DM +A++EIFGPV +++K+K
Sbjct: 358 GFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFK 391
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475 |
| >gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Score = 394 bits (1014), Expect = e-134
Identities = 169/377 (44%), Positives = 221/377 (58%), Gaps = 10/377 (2%)
Query: 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
++P TG+V+ V AEDV+ AV +A+ A E W + ER +I+ + ADLL N
Sbjct: 1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQKE--WSATSGMERGRILRKAADLLRERN 58
Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPI 204
DEIA LET DNGKP E A+ ++ + YYAG A + G P G T EP+
Sbjct: 59 DEIARLETIDNGKPIE-EARVDIDSSADCLEYYAGLAPTLSGEHVPLPGGSFAYTRREPL 117
Query: 205 GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLN 264
GV I WN+P+ + +WK PALACGN +V K + TPL+AL ++++L EAGLP GV N
Sbjct: 118 GVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALLLAEILTEAGLPDGVFN 177
Query: 265 IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324
+V G G T G L H +V K++FTGS TGK V+ AAK +K VTLELGGKSP I+ +
Sbjct: 178 VVQGGGET-GQLLCEHPDVAKVSFTGSVPTGKKVMSAAAK-GIKHVTLELGGKSPLIIFD 235
Query: 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384
DAD++ A A A F +QGQ C G+R FV S+ D+F E+ K +GDP
Sbjct: 236 DADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDT 295
Query: 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-----AKGYYIKPTVFTGVKDDML 439
Q G I E EK+L YI S GAK+ GGER+ G+Y+ P V T DDM
Sbjct: 296 QMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMT 355
Query: 440 IAKDEIFGPVQSILKYK 456
I ++EIFGPV SIL +
Sbjct: 356 IVREEIFGPVMSILPFD 372
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457 |
| >gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Score = 393 bits (1012), Expect = e-134
Identities = 175/371 (47%), Positives = 236/371 (63%), Gaps = 4/371 (1%)
Query: 88 PRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI 147
P G V+ AEG EDV+ AV+AARKAFD+GPWPRM+ ER+ ++L+ ADL+ + +
Sbjct: 4 PAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERL 63
Query: 148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQ-TLHEPIGV 206
A +ET ++GKP Q A+ E+ L+RY A A + G + G + L EPIGV
Sbjct: 64 ALIETLESGKPISQ-ARGEIEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIGV 122
Query: 207 AGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIV 266
G I PWNFP L+ + K+ ALA G T+V+K +E T + L +++LL EAGLP GV+NIV
Sbjct: 123 VGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLIEAGLPAGVVNIV 182
Query: 267 SGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDA 326
+GYG T G A+ H +VD ++FTGST GK + AA+ NLK V+LELGGK+P IV DA
Sbjct: 183 TGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAAR-NLKKVSLELGGKNPQIVFADA 241
Query: 327 DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQ 386
D+D AA+ + ++FN G+CC +GSR VHES+ D FV A + K VGDP +
Sbjct: 242 DLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKV 301
Query: 387 GPQIDSEQFEKILKYIRSGVDGGAKLETGGERL-GAKGYYIKPTVFTGVKDDMLIAKDEI 445
G I+ Q KI Y+ +G GA L GGERL A G + +PT+FT V DM IA++EI
Sbjct: 302 GAIINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEI 361
Query: 446 FGPVQSILKYK 456
FGPV S+L +
Sbjct: 362 FGPVLSVLTFD 372
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454 |
| >gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 391 bits (1008), Expect = e-133
Identities = 164/393 (41%), Positives = 220/393 (55%), Gaps = 9/393 (2%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
L I G++V + +T + P T +V+ V E DV+ AV+AAR+AFD GPWPR++
Sbjct: 1 LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPA 60
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK---I 184
ER+ ++ R AD LE DE+A L T +NG P S + + P L RYYA A
Sbjct: 61 ERAAVLRRLADALEARADELARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFE 120
Query: 185 QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
+ G V EP+GV I+PWN PL + A K+ PALA G T+VLK + +TPL
Sbjct: 121 ERRPGSGGGHVLV--RREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPL 178
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
A +++ EAGLPPGV+N+V G L H VDK++FTGST G+ + +
Sbjct: 179 DAYLLAEAAEEAGLPPGVVNVVPA-DREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCG- 236
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
L VTLELGGKS IV +DAD+D A A N GQ C A +R V S YD+ V
Sbjct: 237 ERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVV 296
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA--K 422
E A VGDP Q GP + Q E++ YI G GA+L TGG R +
Sbjct: 297 EALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDR 356
Query: 423 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 455
G++++PT+F V +DM IA++EIFGPV S++ Y
Sbjct: 357 GWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPY 389
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471 |
| >gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 391 bits (1007), Expect = e-133
Identities = 161/392 (41%), Positives = 229/392 (58%), Gaps = 7/392 (1%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
T+LLING+ V G+ P +P TG+V+ +AE A V+ AV+AA AF E W + T
Sbjct: 3 TKLLINGELVAG-EGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFPE--WSQTT 59
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
ER++ +L+ AD +E + DE A LE+ + GKP + E+P +FR++AG A ++
Sbjct: 60 PKERAEALLKLADAIEENADEFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLE 119
Query: 186 GLTAPADGPYHVQTLH-EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G A H + +P+GV I PWN+PL+M AWK+ PALA GNT+VLK +E TPL
Sbjct: 120 GKAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSEITPL 179
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
+AL +++L + LPPGVLN+V+G G T G AL H +V ++ TGS TGK VL AA
Sbjct: 180 TALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAAD 238
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
S +K LELGGK+P IV +DAD+D E ++N GQ C A R + +YD V
Sbjct: 239 S-VKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLV 297
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI-RSGVDGGAKLETGGERLGAKG 423
K A VGDP + GP I + +++ ++ R+ G ++ TGGE KG
Sbjct: 298 AKLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKG 357
Query: 424 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 455
YY +PT+ G + D I + E+FGPV S+ +
Sbjct: 358 YYYEPTLLAGARQDDEIVQREVFGPVVSVTPF 389
|
Length = 475 |
| >gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Score = 388 bits (998), Expect = e-131
Identities = 168/392 (42%), Positives = 230/392 (58%), Gaps = 10/392 (2%)
Query: 69 LINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
I+G++V G+ +P T DV+ A AED + A++AA AF W R +
Sbjct: 4 YIDGEWVAGGDGE--ENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFPA--WRRTSPE 59
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
R+ I+ + D LE +E+A L T + GK + A+ EV ++FRYYAG A ++ G
Sbjct: 60 ARADILDKAGDELEARKEELARLLTREEGKTLPE-ARGEVTRAGQIFRYYAGEALRLSGE 118
Query: 188 TAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
T P+ P V+T EP+GV G I PWNFP+ + AWK+ PALA GNT+V K AE TP SA
Sbjct: 119 TLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASA 178
Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306
+ ++L EAGLP GV N+V G G G AL H +VD ++FTGST G+ + AA +
Sbjct: 179 WALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAA-AR 237
Query: 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 366
V LE+GGK+P +V +DAD+D A E A FF+ GQ C A SR V E ++D+FVE
Sbjct: 238 GARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEA 297
Query: 367 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL--GAKGY 424
VGD G+ GP + Q EK L+YI GAKL GGERL +GY
Sbjct: 298 LVERTKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGY 357
Query: 425 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
Y+ P +F GV +DM IA++EIFGPV ++++ +
Sbjct: 358 YLAPALFAGVTNDMRIAREEIFGPVAAVIRVR 389
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473 |
| >gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 384 bits (988), Expect = e-130
Identities = 161/390 (41%), Positives = 237/390 (60%), Gaps = 7/390 (1%)
Query: 70 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYER 129
I+G++V+ ++G T ++P G+VI V EDV RA++AAR+A E W M+ ER
Sbjct: 2 IDGEYVEDSAGTTREIINPANGEVIATVHAATPEDVERAIAAARRAQGE--WAAMSPMER 59
Query: 130 SKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA 189
+I+ R ADL+ N+E+A LET D GK +++ ++ +F ++AG A + G
Sbjct: 60 GRILRRAADLIRERNEELAKLETLDTGKTLQETIVADMDSGADVFEFFAGLAPALNGEII 119
Query: 190 PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 249
P GP T+ EP+GV I WN+PL + +WK+ PALA GN +V K +E TPL+AL V
Sbjct: 120 PLGGPSFAYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSENTPLTALKV 179
Query: 250 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKP 309
++++ EAGLP GV N+V G G G L +H +V K++FTG TGK ++ AA +LK
Sbjct: 180 AEIMEEAGLPKGVFNVVQGDGAEVGPLLVNHPDVAKVSFTGGVPTGKKIMA-AAAGHLKH 238
Query: 310 VTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANA 369
VT+ELGGKSP IV +DAD++ A + A FF+ GQ C G+R FVH+ + ++F+ +
Sbjct: 239 VTMELGGKSPLIVFDDADLESAVDGAMLGNFFSAGQVCSNGTRVFVHKKIKERFLARLVE 298
Query: 370 LAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYY 425
+ +GDPF + GP I + +K+L YI G GA L TGG R G++
Sbjct: 299 RTERIKLGDPFDEATEMGPLISAAHRDKVLSYIEKGKAEGATLATGGGRPENVGLQNGFF 358
Query: 426 IKPTVFTGVKDDMLIAKDEIFGPVQSILKY 455
++PTVF DDM I ++EIFGPV ++L +
Sbjct: 359 VEPTVFADCTDDMTIVREEIFGPVMTVLTF 388
|
Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467 |
| >gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Score = 380 bits (977), Expect = e-129
Identities = 172/371 (46%), Positives = 231/371 (62%), Gaps = 10/371 (2%)
Query: 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
++P T I + AEDV+ AV AAR+AF W + T ER+K + A+ +
Sbjct: 1 VINPATEATIGEIPAATAEDVDAAVRAARRAFPR--WKKTTGAERAKYLRAIAEGVRERR 58
Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA----DGPYHVQTL 200
+E+A LE DNGKP ++ A +V F YYA A+++ A + +
Sbjct: 59 EELAELEARDNGKPLDE-AAWDVDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVR 117
Query: 201 HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPP 260
EP+GV G I PWNFPLLM AWKV PALA G T+VLK +E T L+ L ++++ EAGLPP
Sbjct: 118 REPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELELAEIAAEAGLPP 177
Query: 261 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPF 320
GVLN+V+G G AGA LA+H +DK++FTGST TG V+Q AA+ ++KPV+LELGGKSP
Sbjct: 178 GVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQ-DIKPVSLELGGKSPI 236
Query: 321 IVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380
IV +DAD++KA E A + F+N GQ C A SR VHES+ D F+E+ A VGDP
Sbjct: 237 IVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPL 296
Query: 381 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER--LGAKGYYIKPTVFTGVKDDM 438
+ G++ GP + Q+EK+L +I G + GA+L GG R KGY+I PTVF V D
Sbjct: 297 EEGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDS 356
Query: 439 LIAKDEIFGPV 449
I ++EIFGPV
Sbjct: 357 RIWREEIFGPV 367
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456 |
| >gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Score = 378 bits (973), Expect = e-128
Identities = 155/380 (40%), Positives = 212/380 (55%), Gaps = 13/380 (3%)
Query: 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145
++P T +VI + A DV+ A++AAR+AFD G W A ER++ + + + LE +
Sbjct: 2 INPATEEVIGTAPDAGAADVDAAIAAARRAFDTGDW-STDAEERARCLRQLHEALEARKE 60
Query: 146 EIAALETWDNGKP--FEQSAQTEVPMTTRLFRYYAGWADKI---QGLTAPAD--GPYHVQ 198
E+ AL + G P ++ Q + P+ RY+A AD L PA GP
Sbjct: 61 ELRALLVAEVGAPVMTARAMQVDGPIGH--LRYFADLADSFPWEFDLPVPALRGGPGRRV 118
Query: 199 TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGL 258
EP+GV I PWNFP + K+ PALA GNT+VLK A TPLSAL + +++ E L
Sbjct: 119 VRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEIIAETDL 178
Query: 259 PPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS 318
P GV+N+V+G G AL + VD ++FTGST G+ ++ AA + LK V LELGGKS
Sbjct: 179 PAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAA-ATLKRVLLELGGKS 237
Query: 319 PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 378
IV +DAD+ AA A N GQ C +R V S YD+ VE A VGD
Sbjct: 238 ANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGD 297
Query: 379 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL--GAKGYYIKPTVFTGVKD 436
P G GP I + Q +++ YI G D GA+L TGG R KG+Y++PT+F V +
Sbjct: 298 PADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDN 357
Query: 437 DMLIAKDEIFGPVQSILKYK 456
DM IA++EIFGPV ++ Y
Sbjct: 358 DMRIAQEEIFGPVLVVIPYD 377
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459 |
| >gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Score = 372 bits (957), Expect = e-126
Identities = 163/372 (43%), Positives = 220/372 (59%), Gaps = 6/372 (1%)
Query: 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145
+DP TG+ I V + A DV+ AV+AA AF W R T ERSK +L+ AD +E + +
Sbjct: 2 VDPATGEEIATVPDASAADVDAAVAAAHAAFPS--WRRTTPAERSKALLKLADAIEENAE 59
Query: 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTL-HEPI 204
E+AALE+ + GKP E+P FR++AG A ++G A P H + EPI
Sbjct: 60 ELAALESRNTGKPLHLVRDDELPGAVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPI 119
Query: 205 GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLN 264
GV QI PWN+PL+M AWK+ PALA GNT+VLK +E TPL+ L +++L E LPPGV+N
Sbjct: 120 GVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLLLAELAAE-VLPPGVVN 178
Query: 265 IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324
+V G G +AG AL +H V ++ TGS TGK V + AA LK V LELGGK+P IV +
Sbjct: 179 VVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAAD-TLKRVHLELGGKAPVIVFD 237
Query: 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384
DAD+D A A ++N GQ C A R +VHESVYD+FV VGDP
Sbjct: 238 DADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDT 297
Query: 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDE 444
+ GP + Q E++ ++ A++ TGG R GY+ +PTV GV D I ++E
Sbjct: 298 EMGPLNSAAQRERVAGFV-ERAPAHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEE 356
Query: 445 IFGPVQSILKYK 456
IFGPV ++ +
Sbjct: 357 IFGPVVTVQPFD 368
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450 |
| >gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Score = 370 bits (953), Expect = e-125
Identities = 176/389 (45%), Positives = 244/389 (62%), Gaps = 14/389 (3%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
ING++V + K+FPT++P TG+V+ V + E EDV+ AV+AAR AF+ W + +
Sbjct: 24 HFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFES--WSALPGH 81
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
R++ + R A +++H A LE+ DNGKP +S ++P+ R F ++AGWA +
Sbjct: 82 VRARHLYRIARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLD-- 139
Query: 188 TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247
T A +P+GV GQI+PWNFPLLM AWK+ PALA GNT+VLK AE TPL+AL
Sbjct: 140 TELAG--------WKPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTAL 191
Query: 248 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 307
+++ EAGLPPGVLNIV+G G G+ALA+H VDK+AFTGST G+ + + A +
Sbjct: 192 LFAEICAEAGLPPGVLNIVTGNGSF-GSALANHPGVDKVAFTGSTEVGRALRRATAGTG- 249
Query: 308 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 367
K ++LELGGKSPFIV +DAD+D A E A++FNQGQ CCAGSR V ESV ++ + K
Sbjct: 250 KKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKL 309
Query: 368 NALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIK 427
VGDP I G +D Q ++I + + G GA + G L +KG +
Sbjct: 310 KERMSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYP 369
Query: 428 PTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
PT+FT V IA++EIFGPV +L ++
Sbjct: 370 PTLFTNVPPASRIAQEEIFGPVLVVLTFR 398
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480 |
| >gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 367 bits (943), Expect = e-123
Identities = 172/406 (42%), Positives = 234/406 (57%), Gaps = 15/406 (3%)
Query: 56 PITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKA 115
I P + QL I G++ + GK P ++P T + I + AEDV+ AV AARKA
Sbjct: 2 AIPVPRR----QLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKA 57
Query: 116 FDE---GPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTR 172
F W R T R+K + A + E+A LET D GKP +++A +
Sbjct: 58 FKRNKGKDWARTTGAVRAKYLRAIAAKITERKSELAKLETLDCGKPLDEAAWDMDDVAG- 116
Query: 173 LFRYYAGWADKIQGL-TAPADGP---YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 228
F YYA A+ + AP P + L EP+GV G I PWN+PLLM WKV PAL
Sbjct: 117 CFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLLMATWKVAPAL 176
Query: 229 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 288
A G T VLK +E ++ L ++ + E GLPPGVLN+V+G G AGA LASH VDK+AF
Sbjct: 177 AAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAF 236
Query: 289 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 348
TGST TG+ ++ AA+ +KPV+LELGGKSP IV +D D+DKA E A + F+ GQ C
Sbjct: 237 TGSTATGRKIMTAAAQ-MVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICS 295
Query: 349 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 408
A SR VHE + +F+EK A + DP + G + GP + Q+EK+LK+I +
Sbjct: 296 ATSRLLVHERIASEFLEKLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSE 355
Query: 409 GAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSI 452
GA + GG+R KG++I+PT+ T V M I ++E+FGPV +
Sbjct: 356 GATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCV 401
|
Length = 503 |
| >gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 363 bits (933), Expect = e-122
Identities = 170/398 (42%), Positives = 232/398 (58%), Gaps = 18/398 (4%)
Query: 70 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYER 129
I G++V G+ F + P TG V V AED+ A+ AA A + W + + ER
Sbjct: 5 IGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKEA--WGKTSVAER 62
Query: 130 SKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA 189
+ I+ + AD +E + + +A ETWDNGKP ++ ++P+ FRY+AG +G +
Sbjct: 63 ANILNKIADRMEANLEMLAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSIS 122
Query: 190 PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 249
D HEP+GV GQIIPWNFPLLM WK+ PALA GN +VLK AEQTP S L +
Sbjct: 123 EIDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASILVL 182
Query: 250 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKP 309
+L+ + LPPGV+N+V+G+G AG LAS + K+AFTG TTTG++++Q A++ N+ P
Sbjct: 183 MELIGDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASE-NIIP 240
Query: 310 VTLELGGKSPFIVCE------DADVDKAAELAHYALF-FNQGQCCCAGSRTFVHESVYDQ 362
VTLELGGKSP I DA DKA E + +F NQG+ C SR + ES+YD+
Sbjct: 241 VTLELGGKSPNIFFADVMDADDAFFDKALE--GFVMFALNQGEVCTCPSRALIQESIYDR 298
Query: 363 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER---- 418
F+E+A G+P G Q EQ EKIL YI G + GA++ TGGER
Sbjct: 299 FMERALERVKAIKQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELG 358
Query: 419 LGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
G Y PT F G + M I ++EIFGPV ++ +K
Sbjct: 359 GLLGGGYYVPTTFKG-GNKMRIFQEEIFGPVLAVTTFK 395
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479 |
| >gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 361 bits (927), Expect = e-121
Identities = 167/397 (42%), Positives = 237/397 (59%), Gaps = 13/397 (3%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
I+G+FV S SG+TF TL P T +V+ VA G A DV+RA AA++AF W + A
Sbjct: 3 HFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFKR--WAELKAA 60
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA-DKIQG 186
ER + + + ADL+E+H DEIA LE D G+P Q+ Q +V FR++A + + G
Sbjct: 61 ERKRYLHKIADLIEQHADEIAVLECLDCGQPLRQTRQ-QVIRAAENFRFFADKCEEAMDG 119
Query: 187 LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
T P D + T+ P+G G I PWN P ++ WK+ PALA GNT+VLK AE +PL+A
Sbjct: 120 RTYPVDTHLNY-TVRVPVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPLTA 178
Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306
++++ EAGLP GV N+V G+G AG AL +H +V ++FTG T TG I+++ A +
Sbjct: 179 ARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGADT- 237
Query: 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 366
LK ++ELGGKSP IV +DAD+++A + + +F G+ C A SR V ES+ + FVEK
Sbjct: 238 LKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEK 297
Query: 367 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA----- 421
VG P + GP I E K+L Y+ + GA + GGER
Sbjct: 298 LVERVRAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGED 357
Query: 422 --KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
+G Y+ PTVFTG + M IA++EIFGPV +++ +K
Sbjct: 358 LGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFK 394
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 355 bits (913), Expect = e-120
Identities = 156/347 (44%), Positives = 193/347 (55%), Gaps = 65/347 (18%)
Query: 111 AARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMT 170
AAR AF W + ER+ I+ + ADLLE +E+AALET + GKP + A EV
Sbjct: 2 AARAAFKA--WAALPPAERAAILRKIADLLEERREELAALETLETGKP-IEEALGEVARA 58
Query: 171 TRLFRYYAGWADKIQGLTAPADGPYHV-QTLHEPIGVAGQIIPWNFPLLMFAWKVGPALA 229
FRY AG ADK+ G P+ P EP+GV G I PWNFPLL+ AWK+ PALA
Sbjct: 59 IDTFRYAAGLADKLGGPELPSPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALA 118
Query: 230 CGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFT 289
GNT+VLK +E TPL+AL +++LL EAGLPPGV+N+V G G GAAL SH VDK++FT
Sbjct: 119 AGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDEVGAALLSHPRVDKISFT 178
Query: 290 GSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCA 349
GST GK +++ AA+ NLKPVTLELGGKSP IV EDAD+D A E A + FFN GQ C A
Sbjct: 179 GSTAVGKAIMKAAAE-NLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTA 237
Query: 350 GSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 409
SR VHES + D F
Sbjct: 238 ASRLLVHES-----------------IYDEFV---------------------------- 252
Query: 410 AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
E+L TV V DM IA++EIFGPV ++++K
Sbjct: 253 -------EKLV--------TVLVDVDPDMPIAQEEIFGPVLPVIRFK 284
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 357 bits (918), Expect = e-119
Identities = 160/392 (40%), Positives = 231/392 (58%), Gaps = 3/392 (0%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+L ING++ +A +TF T+DP T + +A G++ D++RAVSAAR F+ G W +
Sbjct: 20 NRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSS 79
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
+R ++ + ADL+E H +E+A LET D GKP S + ++P R R+YA DK+
Sbjct: 80 PAKRKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVY 139
Query: 186 GLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
G A + EP+GV I+PWNFPLL+ WK+GPALA GN+++LK +E++PLS
Sbjct: 140 GEVATTSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLS 199
Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
A+ ++ L EAGLP GVLN+V+G+G AG AL+ H ++D +AFTGST TGK +L+ A S
Sbjct: 200 AIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDS 259
Query: 306 NLKPVTLELGGKSPFIVCEDA-DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
N+K V LE GGKS IV D D+ +AA +F+NQGQ C AG+R + ES+ D+F+
Sbjct: 260 NMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFL 319
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 424
A G P G ID + + +IR G G L G R
Sbjct: 320 ALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREGESKGQLLLDG--RNAGLAA 377
Query: 425 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
I PT+F V + ++++EIFGPV + ++
Sbjct: 378 AIGPTIFVDVDPNASLSREEIFGPVLVVTRFT 409
|
Length = 494 |
| >gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Score = 355 bits (914), Expect = e-119
Identities = 172/394 (43%), Positives = 241/394 (61%), Gaps = 10/394 (2%)
Query: 69 LINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
I G++VDSASG+TF + +P +V+ A DV+ AV AAR+AF E W ++ A
Sbjct: 2 YIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFPE--WRKVPAP 59
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
R++ + R A+LL++ +E+A L T + GKP + + +V + +Y AG ++ G
Sbjct: 60 RRAEYLFRAAELLKKRKEELARLVTREMGKPLAE-GRGDVQEAIDMAQYAAGEGRRLFGE 118
Query: 188 TAPADGPYHVQ-TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
T P++ P T +PIGV I PWNFP+ + +WK+ PAL CGNT+V K AE TP A
Sbjct: 119 TVPSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPACA 178
Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306
L + +L EAGLPPGV+N+V G G G AL H +VD ++FTGST G+ + + A+ N
Sbjct: 179 LKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCARPN 238
Query: 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 366
K V LE+GGK+P IV +DAD+D A E A ++ F GQ C A SR VHESVYD+F+++
Sbjct: 239 -KRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKR 297
Query: 367 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL----GAK 422
A + VGD GP I+ Q EK+L Y G + GA L GGERL K
Sbjct: 298 FVERAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEK 357
Query: 423 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
GY+++PTVFT V DM IA++EIFGPV ++++
Sbjct: 358 GYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVS 391
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478 |
| >gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Score = 354 bits (910), Expect = e-118
Identities = 169/379 (44%), Positives = 231/379 (60%), Gaps = 12/379 (3%)
Query: 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
++P TG VI V A DV+RAV+AA+ AF W A ER K++ R AD LE +
Sbjct: 1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAF--PEWAATPARERGKLLARIADALEARS 58
Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQ-TLHEP 203
+E+A L + G A+ E + LFRY+ G A +++G T P GP + T+ EP
Sbjct: 59 EELARLLALETGNALRTQARPEAAVLADLFRYFGGLAGELKGETLPF-GPDVLTYTVREP 117
Query: 204 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVL 263
+GV G I+PWN PL++ A K+ PAL GNT+VLK AE PL+ L ++++L + LP GVL
Sbjct: 118 LGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILAQV-LPAGVL 176
Query: 264 NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 323
N+++GYG GAAL H +VDK+ FTGST GKI+ + AA L PV+LELGGKSP IV
Sbjct: 177 NVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAAD-RLIPVSLELGGKSPMIVF 235
Query: 324 EDADVDKAAELAHYAL-FFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 382
DAD+D A + A + F QGQ C AGSR FVHE +YD F+EK A K +GDP
Sbjct: 236 PDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDE 295
Query: 383 GIQQGPQIDSEQFEKILKYIRSGVDG-GAKLETGG----ERLGAKGYYIKPTVFTGVKDD 437
G I +QF K+ YI G+ GA + GG E A G++++PT+F+GV ++
Sbjct: 296 ATDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNE 355
Query: 438 MLIAKDEIFGPVQSILKYK 456
+A++EIFGPV + +K
Sbjct: 356 WRLAREEIFGPVLCAIPWK 374
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457 |
| >gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Score = 352 bits (907), Expect = e-118
Identities = 156/374 (41%), Positives = 205/374 (54%), Gaps = 14/374 (3%)
Query: 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145
++P TG+V +++AV+AA+ AF W ER +L AD +E + +
Sbjct: 2 INPATGEVFASAPVASEAQLDQAVAAAKAAFPG--WSATPLEERRAALLAIADAIEANAE 59
Query: 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA--DKIQGLTAPADGPYHVQTLHEP 203
E+A L T + GKP + AQ EV RY A D++ V+ +P
Sbjct: 60 ELARLLTLEQGKPLAE-AQFEVGGAVAWLRYTASLDLPDEVIEDDDTR----RVELRRKP 114
Query: 204 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVL 263
+GV I+PWNFPLL+ AWK+ PAL GNT+VLK + TPL L + +L E LPPGVL
Sbjct: 115 LGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEV-LPPGVL 173
Query: 264 NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 323
N+VSG G G AL SH ++ K++FTGST TGK V+ AAK LK VTLELGG IV
Sbjct: 174 NVVSG-GDELGPALTSHPDIRKISFTGSTATGKKVMASAAK-TLKRVTLELGGNDAAIVL 231
Query: 324 EDADVDKAAE-LAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 382
D D+D A L A F N GQ C A R +VHES+YD+F E ALA VVGD
Sbjct: 232 PDVDIDAVAPKLFWGA-FINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDP 290
Query: 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAK 442
G GP + Q++K+ + + GAK+ GGE L GY+I PT+ + I
Sbjct: 291 GTTLGPVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVD 350
Query: 443 DEIFGPVQSILKYK 456
+E FGPV +LKY
Sbjct: 351 EEQFGPVLPVLKYS 364
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446 |
| >gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 343 bits (882), Expect = e-114
Identities = 165/392 (42%), Positives = 238/392 (60%), Gaps = 5/392 (1%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
TQ LI G++ D+ GKTFP +P TG+VI +V + N A+++A AF W ++T
Sbjct: 25 TQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFP--SWSKLT 82
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A ERSKI+ R+ DL+ + +++A L T + GKP + A EV Y+A A ++
Sbjct: 83 ASERSKILRRWYDLIIANKEDLAQLMTLEQGKPL-KEAIGEVAYGASFLEYFAEEAKRVY 141
Query: 186 G-LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G + + L +P+GV G I PWNFPL M KVGPALA G T+V+K +E TPL
Sbjct: 142 GDIIPSPFPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPL 201
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
+AL ++L +AG+PPGVLN+V G P G AL + +V K+ FTGST GK ++ AA
Sbjct: 202 TALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAAA 261
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
+ +K V+LELGG +PFIV +DAD+D A + A + F N GQ C +R V E +YD+F
Sbjct: 262 T-VKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFA 320
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 424
E + K VVGD F+ G+ QGP I+ +K+ +++ V GAK+ GG+R G
Sbjct: 321 EAFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGT 380
Query: 425 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
+ +PTV V +DMLI ++E+FGPV + ++K
Sbjct: 381 FYEPTVLGDVTEDMLIFREEVFGPVAPLTRFK 412
|
Length = 498 |
| >gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Score = 339 bits (872), Expect = e-113
Identities = 155/377 (41%), Positives = 221/377 (58%), Gaps = 10/377 (2%)
Query: 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
++P TG V+ V A DV+RAV+AAR AF E W T ER++++ A L H
Sbjct: 1 VINPATGQVLARVPAASAADVDRAVAAARAAFPE--WRATTPLERARMLRELATRLREHA 58
Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPI 204
+E+A ++ D G P + +V + L Y+AG +++G T P G TL EP
Sbjct: 59 EELALIDALDCGNPV-SAMLGDVMVAAALLDYFAGLVTELKGETIPVGGRNLHYTLREPY 117
Query: 205 GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLN 264
GV +I+ +N PL+ A K+ LA GNT+V+K EQ PLSAL +++L E LPPGV N
Sbjct: 118 GVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELAREV-LPPGVFN 176
Query: 265 IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324
I+ G G TAGAAL H +V ++A GS TG+ +++ AA+ +K VTLELGGK+ IV
Sbjct: 177 ILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEG-IKHVTLELGGKNALIVFP 235
Query: 325 DADVDKAAELAHYALFFN-QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383
DAD + AA+ A + F GQ C + SR FVHES+YD+ + + VGDP
Sbjct: 236 DADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPA 295
Query: 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER----LGAKGYYIKPTVFTGVKDDML 439
GP + +Q+++++ YI S GA+L TGG R G+Y++PTVF V M
Sbjct: 296 TTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMR 355
Query: 440 IAKDEIFGPVQSILKYK 456
IA++EIFGPV S+L+++
Sbjct: 356 IAREEIFGPVLSVLRWR 372
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456 |
| >gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 335 bits (861), Expect = e-111
Identities = 143/355 (40%), Positives = 197/355 (55%), Gaps = 9/355 (2%)
Query: 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163
DV+RA +AA A W ER+ I+ + A++LE DEIA ++G A
Sbjct: 1 DVDRAYAAAAAAQKA--WAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTR-PKA 57
Query: 164 QTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQ-TLHEPIGVAGQIIPWNFPLLMFAW 222
EV + R AG + +G P+D P P+GV G I P+NFPL++
Sbjct: 58 AFEVGAAIAILREAAGLPRRPEGEILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMR 117
Query: 223 KVGPALACGNTIVLKTAEQTPLS-ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHM 281
V PALA GN +VLK +TP++ L ++++ EAGLP GVLN+V G G G AL H
Sbjct: 118 SVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVLNVVPGGGSEIGDALVEHP 177
Query: 282 EVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 341
V ++FTGST G+ + +LA + +LK V LELGG +P IV +DAD+D A A + F
Sbjct: 178 RVRMISFTGSTAVGRHIGELAGR-HLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFL 236
Query: 342 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 401
+QGQ C A R VHESVYD+FVEK A A VGDP GP I+ Q +++
Sbjct: 237 HQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAI 296
Query: 402 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
+ V GA+L TGG +G + +PTV + V DM I ++EIFGPV ++ +
Sbjct: 297 VEDAVAAGARLLTGGT---YEGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFD 348
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431 |
| >gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Score = 336 bits (864), Expect = e-111
Identities = 160/394 (40%), Positives = 221/394 (56%), Gaps = 9/394 (2%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
I+G+ V S K +P T VI VA DV+ AV++A +AF W + T
Sbjct: 2 HFIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFV-SAWAKTTPA 60
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
ER +I+LR ADL+E+H +E+A LET +GK S EV + RY+AGWA KI G
Sbjct: 61 ERGRILLRLADLIEQHGEELAQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGE 120
Query: 188 T------APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
T + Y T EP+GV I+PWNF +++ WK+G ALA G TIV+K +E
Sbjct: 121 TLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKPSEF 180
Query: 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
TPL+ L V++L EAG+P GVLN+V+G G GA L SH +V K++FTGS TGK + +
Sbjct: 181 TPLTLLRVAELAKEAGIPDGVLNVVNGKGAV-GAQLISHPDVAKVSFTGSVATGKKIGRQ 239
Query: 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
AA S+L VTLELGGK+ +DAD+D E A F +QGQ C A R +VH S +D
Sbjct: 240 AA-SDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFD 298
Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 421
+ V K VG P + GP + F+K+ Y+ G ++ GGE L
Sbjct: 299 ELVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAG 358
Query: 422 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 455
+GY+++PT+ D + ++E FGPV S + Y
Sbjct: 359 EGYFVQPTLVLARSADSRLMREETFGPVVSFVPY 392
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477 |
| >gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Score = 337 bits (867), Expect = e-111
Identities = 154/397 (38%), Positives = 216/397 (54%), Gaps = 14/397 (3%)
Query: 68 LLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
L+I G+ V + + + +P +V+ V + E+ AV AAR AF W R
Sbjct: 35 LVIGGKEVRT--EEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFPT--WRRTPP 90
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
ER++++LR A LL R E+AA + GK + + A +V YYA +++G
Sbjct: 91 EERARLLLRAAALLRRRRFELAAWMVLEVGKNWAE-ADADVAEAIDFLEYYAREMLRLRG 149
Query: 187 LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
+ ++ P+GV I PWNFPL + A AL GNT+VLK AE TP+ A
Sbjct: 150 FPVEMVPGEDNRYVYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIA 209
Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK-- 304
+ ++L EAGLPPGV+N + G G G L H +V +AFTGS G + + AAK
Sbjct: 210 AKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQ 269
Query: 305 ---SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
LK V E+GGK+ IV EDAD+D+AAE + F QGQ C A SR VHESVYD
Sbjct: 270 PGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYD 329
Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG- 420
+F+E+ VGDP + GP ID ++I +YI G G +L GGE L
Sbjct: 330 EFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKSEG-RLLLGGEVLEL 388
Query: 421 -AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
A+GY+++PT+F V D +A++EIFGPV +++K K
Sbjct: 389 AAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAK 425
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512 |
| >gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 329 bits (846), Expect = e-109
Identities = 159/379 (41%), Positives = 216/379 (56%), Gaps = 14/379 (3%)
Query: 83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142
+ P G+VI V EDV +A++AA++ E + AYER++I+ R A LLE
Sbjct: 1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAKEMK--SLPAYERAEILERAAQLLEE 58
Query: 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQ---- 198
+E A + GKP + A+ EV R A A ++ G T P D +
Sbjct: 59 RREEFARTIALEAGKPIKD-ARKEVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIG 117
Query: 199 -TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG 257
T+ EPIGV I P+NFPL + A KVGPA+A GN +VLK A QTPLSAL +++LL EAG
Sbjct: 118 FTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLEAG 177
Query: 258 LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 317
LP G LN+V+G G T G AL + V ++FTGS G+ +A K+ LK VTLELG
Sbjct: 178 LPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEA---IARKAGLKKVTLELGSN 234
Query: 318 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 377
+ IV DAD++KA E F N GQ C + R FVHE +YD+F+E+ A K VVG
Sbjct: 235 AAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVG 294
Query: 378 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDD 437
DP GP I + E+I +++ V+GGA+L TGG+R GA ++PTV T V D
Sbjct: 295 DPLDEDTDVGPMISEAEAERIEEWVEEAVEGGARLLTGGKRDGA---ILEPTVLTDVPPD 351
Query: 438 MLIAKDEIFGPVQSILKYK 456
M + +E+F PV S+ +
Sbjct: 352 MKVVCEEVFAPVVSLNPFD 370
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453 |
| >gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 326 bits (839), Expect = e-107
Identities = 145/395 (36%), Positives = 210/395 (53%), Gaps = 13/395 (3%)
Query: 69 LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYE 128
+I G++V S G+TF + +P G+ I V EDV AV+AAR+AF E W ++ A
Sbjct: 2 VIGGEWVGSG-GETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFKE--WRKVPAPR 58
Query: 129 RSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT 188
R +I+ + + L + + + L + + GK EV + Y G + + GLT
Sbjct: 59 RGEIVRQIGEALRKKKEALGRLVSLEMGKIL-PEGLGEVQEMIDICDYAVGLSRMLYGLT 117
Query: 189 APADGPYHVQ-TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247
P++ P H P+GV G I +NFP+ + W AL CGNT+V K +E TPL+A+
Sbjct: 118 IPSERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLTAI 177
Query: 248 YVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303
V+K+L E GLPPGV+N+V+G G G L V ++FTGST G+ V + A
Sbjct: 178 AVTKILAEVLEKNGLPPGVVNLVTGGGD-GGELLVHDPRVPLVSFTGSTEVGRRVGETVA 236
Query: 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 363
+ V LELGG + IV +DAD+D A +A GQ C R VHESVYD+F
Sbjct: 237 RRF-GRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEF 295
Query: 364 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL--GA 421
+E+ + +GDP G GP I+ EK L I G + TGG+R+ G
Sbjct: 296 LERLVKAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGE 355
Query: 422 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
G Y++PT+ TGV DD I ++E F P+ ++K+
Sbjct: 356 PGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFD 390
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478 |
| >gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Score = 322 bits (828), Expect = e-106
Identities = 154/375 (41%), Positives = 214/375 (57%), Gaps = 8/375 (2%)
Query: 83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142
F L+P G V VA G +D RA++AA AF W T ER +I+L+ A+++ER
Sbjct: 1 FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAF--PAWAATTPSERERILLKAAEIMER 58
Query: 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQ-TLH 201
D++ L + G + A E T L R AG +++G T P+D P V ++
Sbjct: 59 RADDLIDLLIDEGGSTY-GKAWFETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVR 117
Query: 202 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPG 261
P+GV I P+N+PL++ KV ALA GNT+VLK +E+TP+ L +++++ EAGLP G
Sbjct: 118 RPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEAGLPKG 177
Query: 262 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321
V N+V+G G G L V + FTGST G+ + + A + +LK +TLELGGK+P I
Sbjct: 178 VFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGR-HLKKITLELGGKNPLI 236
Query: 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381
V DAD+D A A + F +QGQ C + SR V E VYD+FV+K A A K VGDP
Sbjct: 237 VLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRD 296
Query: 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIA 441
GP I Q E+I + + V GAKL TGG+ G + +PTV T V DM I
Sbjct: 297 PDTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGKYDGN---FYQPTVLTDVTPDMRIF 353
Query: 442 KDEIFGPVQSILKYK 456
++E FGPV S++ K
Sbjct: 354 REETFGPVTSVIPAK 368
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451 |
| >gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 315 bits (810), Expect = e-103
Identities = 154/381 (40%), Positives = 219/381 (57%), Gaps = 15/381 (3%)
Query: 83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142
+P G+VI V E+V A+ A KA D + AY+R KI+++ A+L+ER
Sbjct: 1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKDV--MSNLPAYKRYKILMKVAELIER 58
Query: 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADG-PYH----V 197
+E+A L T + GKP +QS + EV T RLF+ A A ++G T P D Y+
Sbjct: 59 RKEELAKLLTIEVGKPIKQS-RVEVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIA 117
Query: 198 QTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG 257
T+ EPIGV G I P+NFP +FA K+ PA+A GN++V+K + TPL+A+ ++K+L EAG
Sbjct: 118 FTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILEEAG 177
Query: 258 LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK--SNLKPVTLELG 315
LPPGV+N+V+GYG G + ++ +V+ ++FTGST G L +A+K K V LELG
Sbjct: 178 LPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVG---LLIASKAGGTGKKVALELG 234
Query: 316 GKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 375
G P IV +DAD+++A +A F N GQ C A R V E VYD+F++ K
Sbjct: 235 GSDPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLK 294
Query: 376 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVK 435
VGDP GP I E E++ + V+ G K+ GG+R G + PTV
Sbjct: 295 VGDPLDESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGKRDE--GSFFPPTVLENDT 352
Query: 436 DDMLIAKDEIFGPVQSILKYK 456
DM++ K+E+FGPV I K K
Sbjct: 353 PDMIVMKEEVFGPVLPIAKVK 373
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456 |
| >gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 314 bits (806), Expect = e-103
Identities = 145/372 (38%), Positives = 226/372 (60%), Gaps = 6/372 (1%)
Query: 87 DPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146
+P TG++I V + ++ A+ AA +AF W TA ERS ++ ++ +L+ + D+
Sbjct: 3 NPATGEIIGSVPDQGVDETEAAIRAAYEAFKT--WRATTAKERSSLLRKWYNLMMENKDD 60
Query: 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYH-VQTLHEPIG 205
+A L T +NGKP ++ A+ E+ ++A A ++ G T P+ + + +P+G
Sbjct: 61 LARLITLENGKPLKE-AKGEILYAASFLEWFAEEAKRVYGDTIPSPQSDKRLIVIKQPVG 119
Query: 206 VAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNI 265
V I PWNFP M K G ALA G T+V+K AEQTPLSAL +++L +AG+P GVLN+
Sbjct: 120 VCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQAGIPKGVLNV 179
Query: 266 VSG-YGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324
++G G L + V K++FTGST GKI+++ +A + +K V++ELGG +PFIV +
Sbjct: 180 ITGSRAKEVGNVLTTSPLVRKISFTGSTNVGKILMKQSAST-VKKVSMELGGNAPFIVFD 238
Query: 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384
DAD+D+A E A + F N GQ C +R +VH+ +YD+F +K K VG+ G+
Sbjct: 239 DADLDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGV 298
Query: 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDE 444
QGP I+ + EK+ K+I V+ GAK+ TGG+R G + +PTV + V DML++K+E
Sbjct: 299 TQGPLINEKAVEKVEKHIADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTADMLVSKEE 358
Query: 445 IFGPVQSILKYK 456
FGP+ + K+
Sbjct: 359 TFGPLAPVFKFD 370
|
Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448 |
| >gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 315 bits (809), Expect = e-103
Identities = 153/398 (38%), Positives = 216/398 (54%), Gaps = 18/398 (4%)
Query: 70 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYER 129
ING FV SGKTF ++P G VI V E A +V+ AV+AAR A +GPW +MT ER
Sbjct: 5 INGAFV--ESGKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAAL-KGPWGKMTVAER 61
Query: 130 SKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG--- 186
+ ++ AD +ER D+ A E D GKP ++ ++P FR +A
Sbjct: 62 ADLLYAVADEIERRFDDFLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECF 121
Query: 187 -LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
+ P + +P+GV G I PWN PLL+ WKVGPALACGNT+V+K +E+TP +
Sbjct: 122 EMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGT 181
Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGP-TAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
A + ++++ G+P GV N+V G+GP +AG L H VD + FTG T TG +++ AA
Sbjct: 182 ATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAAAD 241
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
+KPV+ ELGGK+ IV D D D A + F N GQ C R +V ++D+FV
Sbjct: 242 G-VKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFV 300
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG-------E 417
A A +G P GP I +E +K+L Y V+ GA + TGG
Sbjct: 301 AALKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDA 360
Query: 418 RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 455
A G +++PT++TG+ D + +EIFGP I +
Sbjct: 361 L--AGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPF 396
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481 |
| >gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 303 bits (777), Expect = 2e-98
Identities = 155/389 (39%), Positives = 212/389 (54%), Gaps = 13/389 (3%)
Query: 72 GQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSK 131
G++ D S +T L+P TG+ + + EDV+ A AA A E W ER++
Sbjct: 1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQKE--WAATLPQERAE 58
Query: 132 IILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA 191
I+ + A +LE DEI ++G + A E + R A + +++G P+
Sbjct: 59 ILEKAAQILEERRDEIVEWLIRESGSTRIK-ANIEWGAAMAITREAATFPLRMEGRILPS 117
Query: 192 DGP---YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA-L 247
D P V EP+GV G I PWNFPL + V PALA GN +VLK A TP++ L
Sbjct: 118 DVPGKENRV--YREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPITGGL 175
Query: 248 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 307
++K+ EAGLP GVLN+V G G G A H ++FTGST G+ + +LA + +L
Sbjct: 176 LLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGR-HL 234
Query: 308 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 367
K V LELGG +PF+V EDAD+D A A + F +QGQ C A +R VHE VYD+FVEK
Sbjct: 235 KKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKF 294
Query: 368 NALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIK 427
GDP GP I+ Q + +L I V+ GA L GGE A+G ++
Sbjct: 295 VERVKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGE---AEGNVLE 351
Query: 428 PTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
PTV + V +DM IA++EIFGPV I+K
Sbjct: 352 PTVLSDVTNDMEIAREEIFGPVAPIIKAD 380
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465 |
| >gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 301 bits (774), Expect = 2e-97
Identities = 141/399 (35%), Positives = 207/399 (51%), Gaps = 20/399 (5%)
Query: 68 LLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
L+I G+ + + +++P +V+ V++ E +A+ AA +AF+ W + +
Sbjct: 39 LIIGGERITTE--DKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFET--WKKWSP 94
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA----GWAD 182
+R++I+LR A ++ R E +A + GKP+ + A + YYA AD
Sbjct: 95 EDRARILLRAAAIIRRRKHEFSAWLVKEAGKPWAE-ADADTAEAIDFLEYYARQMLKLAD 153
Query: 183 KIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242
+ P + H + + P+GV I PWNFP + A A+ GNT++LK A T
Sbjct: 154 GKPVESRPGE---HNRYFYIPLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDT 210
Query: 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
P+ A ++L EAGLP GV+N V G G G L H + + FTGS G + + A
Sbjct: 211 PVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERA 270
Query: 303 AKSN-----LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHE 357
AK LK V E+GGK +V EDAD+D AAE + F GQ C A SR VHE
Sbjct: 271 AKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHE 330
Query: 358 SVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE 417
VYD+ +EK L + VG+P GP I+ F+KI+ YI G + G +L GGE
Sbjct: 331 DVYDEVLEKVVELTKELTVGNPEDNA-YMGPVINQASFDKIMSYIEIGKEEG-RLVLGGE 388
Query: 418 RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
+KGY+I+PT+F V I ++EIFGPV + +K K
Sbjct: 389 GDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAK 427
|
Length = 514 |
| >gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp | Back alignment and domain information |
|---|
Score = 298 bits (765), Expect = 7e-97
Identities = 142/374 (37%), Positives = 197/374 (52%), Gaps = 10/374 (2%)
Query: 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145
+P TG+V+ V + +V AV+ AR A W + R++ +LR+ L H D
Sbjct: 1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQRA--WAALGVEGRAQRLLRWKRALADHAD 58
Query: 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI---QGLTAPADGPYHVQTL-H 201
E+A L + GKP A EV + + A A ++ + + P T+ +
Sbjct: 59 ELAELLHAETGKPRA-DAGLEVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEY 117
Query: 202 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPG 261
P GV G I PWN+PLL + PALA GN +VLK +E TPL +++ AG P G
Sbjct: 118 RPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLVGELLAEAWAAAGPPQG 177
Query: 262 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321
VL +V+G G T GAAL VDK+AFTGS TG+ V+ AA+ L PV LELGGK P I
Sbjct: 178 VLQVVTGDGAT-GAALIDA-GVDKVAFTGSVATGRKVMAAAAE-RLIPVVLELGGKDPMI 234
Query: 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381
V DAD+++AA A + N GQ C + R +VHESVYD+FV + A A G
Sbjct: 235 VLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDI 294
Query: 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIA 441
G GP + Q + + +++ V GAK TGG R G + +PTV T V DM +
Sbjct: 295 GDADIGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVM 354
Query: 442 KDEIFGPVQSILKY 455
++E FGPV ++
Sbjct: 355 REETFGPVLPVMPV 368
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453 |
| >gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Score = 291 bits (748), Expect = 5e-94
Identities = 138/395 (34%), Positives = 205/395 (51%), Gaps = 12/395 (3%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+L ING++V+S + + +P TG+VI V AE+V+ AV+AA+ AF W
Sbjct: 1 LKLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFPA--WSATP 58
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
+R +++ +F LLE + DE+A L T ++GK A+ +V + + ++
Sbjct: 59 VLKRQQVMFKFRQLLEENLDELARLITLEHGKTLAD-ARGDVLRGLEVVEFACSIPHLLK 117
Query: 186 GLTAP--ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243
G A G + +P+GV I P+NFP ++ W A+ACGNT VLK +E+ P
Sbjct: 118 GEYLENVARG-IDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVP 176
Query: 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303
+A+ +++LL EAGLP GVLN+V G G A AL H ++ ++F GST G+ + + AA
Sbjct: 177 GAAMRLAELLQEAGLPDGVLNVVHG-GKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAA 235
Query: 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 363
+ K V G K+ +V DAD+++ A A F GQ C A S D++
Sbjct: 236 ANG-KRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEW 294
Query: 364 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL---- 419
+ K A K VG G GP I E+I I SGV+ GAKL G +
Sbjct: 295 IPKLVERAKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPG 354
Query: 420 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 454
G ++ PT+ V DM I K+EIFGPV SI++
Sbjct: 355 YENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVR 389
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478 |
| >gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 292 bits (749), Expect = 1e-93
Identities = 156/396 (39%), Positives = 208/396 (52%), Gaps = 30/396 (7%)
Query: 75 VDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIIL 134
VD A+G T P TG+ + V A DV A + AR A + W ER+ ++L
Sbjct: 26 VDGAAGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAA--QRAWAATPVRERAAVLL 83
Query: 135 RFADLLERHNDEIAALETWDNGKPFEQSAQTE---VPMTTRLFRYYAGWADKIQGLTAPA 191
RF DL+ + +E+ L + GK + A E V +T R YYA A K L AP
Sbjct: 84 RFHDLVLENREELLDLVQLETGKA-RRHAFEEVLDVALTAR---YYARRAPK---LLAPR 136
Query: 192 D--GPYHVQT----LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
G V T L +P GV G I PWN+PL + PAL GN +VLK QTPL+
Sbjct: 137 RRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTPLT 196
Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
AL +LL+EAGLP + +V+G GP G AL + D L FTGST TG+++ + A
Sbjct: 197 ALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQAG-R 253
Query: 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365
L +LELGGK+P IV +DAD+DKAA A A F N GQ C + R +VHES+YD+FV
Sbjct: 254 RLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVR 313
Query: 366 K--ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER---LG 420
A AM+ +G + G I Q E + ++ V GA + GG+ LG
Sbjct: 314 AFVAAVRAMR--LGAGYDYSADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLG 371
Query: 421 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
+ +PTV TGV DM +A++E FGPV S+
Sbjct: 372 P--LFYEPTVLTGVTPDMELAREETFGPVVSVYPVA 405
|
Length = 524 |
| >gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Score = 289 bits (742), Expect = 3e-93
Identities = 148/391 (37%), Positives = 225/391 (57%), Gaps = 5/391 (1%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
Q LING+++D+ +G+ +P GD + V + A++ A+ AA +A W +TA
Sbjct: 12 QALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTA 69
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
ER+ I+ R+ +L+ H D++A L T + GKP + A+ E+ ++A +I G
Sbjct: 70 KERANILRRWFNLMMEHQDDLARLMTLEQGKPLAE-AKGEISYAASFIEWFAEEGKRIYG 128
Query: 187 LTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
T P + + +PIGV I PWNFP M K GPALA G T+VLK A QTP S
Sbjct: 129 DTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFS 188
Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
AL +++L AG+P GV N+V+G G L S+ V KL+FTGST G+ +++ AK
Sbjct: 189 ALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAK- 247
Query: 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365
++K V+LELGG +PFIV +DAD+DKA E A + F N GQ C +R +V + VYD+F E
Sbjct: 248 DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAE 307
Query: 366 KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYY 425
K K +GD + G+ GP ID + K+ ++I ++ GA++ GG+ G +
Sbjct: 308 KLQQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNF 367
Query: 426 IKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
+PT+ V + +AK+E FGP+ + ++K
Sbjct: 368 FQPTILVDVPANAKVAKEETFGPLAPLFRFK 398
|
Length = 482 |
| >gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Score = 284 bits (729), Expect = 1e-91
Identities = 129/361 (35%), Positives = 176/361 (48%), Gaps = 23/361 (6%)
Query: 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164
+ A+ A AF W + + ER+ ++ + ADLL DE+A L T + GKP + A+
Sbjct: 1 IEAALDRAHAAFLA--WRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAE-AR 57
Query: 165 TEVPMTTRLFRYYAGWADKIQGLTAP----ADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220
EV + RYYA + + A D +EP+GV I+PWNFP
Sbjct: 58 AEVEKCAWICRYYA---ENAEAFLADEPIETDAG-KAYVRYEPLGVVLGIMPWNFPF--- 110
Query: 221 AWKV----GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVL-NIVSGYGPTAGA 275
W+V P L GNT++LK A P AL + +L EAG P GV N++
Sbjct: 111 -WQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQNLLIDSDQVE-- 167
Query: 276 ALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELA 335
A+ + V + TGS G+ V A K NLK LELGG PFIV +DAD+DKA + A
Sbjct: 168 AIIADPRVRGVTLTGSERAGRAVAAEAGK-NLKKSVLELGGSDPFIVLDDADLDKAVKTA 226
Query: 336 HYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQF 395
N GQ C A R VHE VYD+F+EK VGDP GP +
Sbjct: 227 VKGRLQNAGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLR 286
Query: 396 EKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 455
+++ + + V GA L GG+R G + PTV T V M +E+FGPV +++K
Sbjct: 287 DELHEQVEEAVAAGATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKV 346
Query: 456 K 456
K
Sbjct: 347 K 347
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429 |
| >gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Score = 282 bits (725), Expect = 3e-91
Identities = 136/358 (37%), Positives = 190/358 (53%), Gaps = 14/358 (3%)
Query: 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163
D ++AV AA AF W + ER I+L+ ADLLE DE + G A
Sbjct: 1 DADQAVEAAAAAFPA--WSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGAT-AAWA 57
Query: 164 QTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQ-TLHEPIGVAGQIIPWNFPLLMFAW 222
V + + R A +I G + P+D P + + EP+GV I PWN P+++
Sbjct: 58 GFNVDLAAGMLREAASLITQIIGGSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTR 117
Query: 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY---GPTAGAALAS 279
+ LA GNT+VLK +E +P + + ++ HEAGLP GVLN+V+ P AL +
Sbjct: 118 AIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNVVTHSPEDAPEVVEALIA 177
Query: 280 HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYAL 339
H V K+ FTGST G+I+ + AAK +LKPV LELGGK+P IV EDAD+D AA A +
Sbjct: 178 HPAVRKVNFTGSTRVGRIIAETAAK-HLKPVLLELGGKAPAIVLEDADLDAAANAALFGA 236
Query: 340 FFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKIL 399
F N GQ C + R VHES+ D+FVEK +K F G + G + + +++
Sbjct: 237 FLNSGQICMSTERIIVHESIADEFVEK-----LKAAAEKLFAGPVVLGSLVSAAAADRVK 291
Query: 400 KYIRSGVDGGAKLETGG-ERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
+ + + GAKL GG G + PT+ V DM I +E FGPV SI++ K
Sbjct: 292 ELVDDALSKGAKLVVGGLADESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVK 349
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432 |
| >gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Score = 284 bits (727), Expect = 4e-91
Identities = 153/391 (39%), Positives = 215/391 (54%), Gaps = 7/391 (1%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
+LLING+ V G+ P +P TG+VI +AE AE V+ AV AA AF E W + T
Sbjct: 3 KLLINGELVS-GEGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFAE--WGQTTP 59
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
R++ +L+ AD++E + A LE+ + GKP E+P +FR++AG A + G
Sbjct: 60 KARAECLLKLADVIEENAQVFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSG 119
Query: 187 LTAPADGPYHVQTLH-EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
L A H + +P+GV I PWN+PL+M AWK+ PALA GN +VLK +E TPL+
Sbjct: 120 LAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLT 179
Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
AL +++L + P GV+NI+ G G T G L H +V ++ TGS TG+ +L A S
Sbjct: 180 ALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAPS 238
Query: 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365
+K +ELGGK+P IV +DAD+D E F+N GQ C A R + +YD VE
Sbjct: 239 -IKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVE 297
Query: 366 KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI-RSGVDGGAKLETGGERLGAKGY 424
K A G P + GP E+++K + + G K+ TGGE+ GY
Sbjct: 298 KLGAAVATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGY 357
Query: 425 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 455
Y PT+ G K D I + E+FGPV SI +
Sbjct: 358 YFAPTLLAGAKQDDAIVQKEVFGPVVSITSF 388
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472 |
| >gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 282 bits (724), Expect = 6e-91
Identities = 144/367 (39%), Positives = 194/367 (52%), Gaps = 9/367 (2%)
Query: 91 GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAAL 150
G V+ V +A DV+RA + A A W ER+ ++ R ADLLE H DEIA
Sbjct: 1 GAVLGEVGVADAADVDRAAARAAAAQRA--WAATPPRERAAVLRRAADLLEEHADEIADW 58
Query: 151 ETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQI 210
++G A EV AG + QG P+ P+GV G I
Sbjct: 59 IVRESGS-IRPKAGFEVGAAIGELHEAAGLPTQPQGEILPSAPGRLSLARRVPLGVVGVI 117
Query: 211 IPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV-SKLLHEAGLPPGVLNIVSGY 269
P+NFPL++ V PALA GN +VLK +TP+S V ++L EAGLP GVL+++ G
Sbjct: 118 SPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIARLFEEAGLPAGVLHVLPG- 176
Query: 270 GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 329
G AG AL V ++FTGST G+ V + A + +LK V+LELGGK+ IV +DAD+D
Sbjct: 177 GADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGR-HLKKVSLELGGKNALIVLDDADLD 235
Query: 330 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQ 389
AA + F +QGQ C A R VHESV D + K A A VGDP G + GP
Sbjct: 236 LAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPL 295
Query: 390 IDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPV 449
I++ Q +++ + V GA+LE GG G + +PTV +GVK M +EIFGPV
Sbjct: 296 INARQLDRVHAIVDDSVAAGARLEAGGTY---DGLFYRPTVLSGVKPGMPAFDEEIFGPV 352
Query: 450 QSILKYK 456
+ +
Sbjct: 353 APVTVFD 359
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443 |
| >gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Score = 280 bits (719), Expect = 5e-90
Identities = 135/371 (36%), Positives = 200/371 (53%), Gaps = 11/371 (2%)
Query: 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
++DP TG+VI A+G + A++AAR+AFDE W R++++L AD E +
Sbjct: 1 SIDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDW-AHDPRLRARVLLELADAFEANA 59
Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA-PADGPYHVQTLHEP 203
+ +A L +NGK + A+ E+ RYYAG A G P G + + L EP
Sbjct: 60 ERLARLLALENGKILGE-ARFEISGAISELRYYAGLARTEAGRMIEPEPGSFSL-VLREP 117
Query: 204 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA-GLPPGV 262
+GVAG I+PWN P+++ + PALA G T+V+K A QT + ++L E LP GV
Sbjct: 118 MGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQINAAIIRILAEIPSLPAGV 177
Query: 263 LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 322
+N+ + G A L + +VD ++FTGST TG+ + AA LK + LELGGK+P IV
Sbjct: 178 VNLFTESGSEGAAHLVASPDVDVISFTGSTATGR-AIMAAAAPTLKRLGLELGGKTPCIV 236
Query: 323 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK-ANALAMKRVVGDPFK 381
+DAD+D A AL GQ C AGSR V S+ D+ ++ A LA + VG
Sbjct: 237 FDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVK-VGPGLD 295
Query: 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG---AKGYYIKPTVFTGVKDDM 438
GP ID +++ + + + GA++ G + AKG +++PT+ D
Sbjct: 296 PASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDA 355
Query: 439 LIAKDEIFGPV 449
I ++EIFGPV
Sbjct: 356 DIVQEEIFGPV 366
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455 |
| >gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Score = 277 bits (710), Expect = 2e-88
Identities = 145/394 (36%), Positives = 201/394 (51%), Gaps = 15/394 (3%)
Query: 69 LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYE 128
LING++ +S SGKT P G+VI V A ++ A A A G WP M E
Sbjct: 5 LINGEWKES-SGKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAG-RGWWPTMPLEE 62
Query: 129 RSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT 188
R + +FADLL+ + +E+A L W+ GK + A EV T R ++ G +
Sbjct: 63 RIDCLHKFADLLKENKEEVANLLMWEIGKTL-KDALKEVDRTIDYIRDTIEELKRLDGDS 121
Query: 189 APADGPYHVQTL-----HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243
P D + EP+GV I P+N+PL + K+ PAL GNT+V K A Q
Sbjct: 122 LPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVFKPATQGV 181
Query: 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303
L + +++ H+AG P GV+N+V+G G G L +H +D ++FTGST G + +
Sbjct: 182 LLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKKQHP 241
Query: 304 KSNLKPVTLELGGKSPFIVCEDADVDKAA-ELAHYALFFNQGQCCCAGSRTFVHESVYDQ 362
K + LELGGK P IV DAD++ AA E+ AL ++ GQ C A R VHESV D+
Sbjct: 242 M---KRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYS-GQRCTAIKRVLVHESVADE 297
Query: 363 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 422
VE K VG P+ G+ P ID + + + I V GA + GG R G
Sbjct: 298 LVELLKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGREG-- 355
Query: 423 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
G I PT+ V DM +A +E FGPV I++
Sbjct: 356 GNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVN 389
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473 |
| >gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Score = 271 bits (695), Expect = 5e-87
Identities = 120/314 (38%), Positives = 180/314 (57%), Gaps = 6/314 (1%)
Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEP 203
EI+AL + GK +Q A+ EV T Y A WA + +G +D P ++
Sbjct: 13 SEISALIVEEGGKI-QQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRA 71
Query: 204 IGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVL 263
+GV I+PWNFP + A K+ PAL GNTIV+K +E TP +A+ +K++ E GLP GV
Sbjct: 72 LGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVF 131
Query: 264 NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 323
N+V G G T G LA + +V ++ TGS + G+ ++ AAK N+ V LELGGK+P IV
Sbjct: 132 NLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMAAAAK-NITKVCLELGGKAPAIVM 190
Query: 324 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV-VGDPFKG 382
+DAD+D A + + N GQ C R +V + +YDQFV + AM+ V G+P +
Sbjct: 191 DDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGE-AMQAVQFGNPAER 249
Query: 383 G-IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIA 441
I GP I++ E++ + + V+ GA++ GG+ + KGYY PT+ V+ +M I
Sbjct: 250 NDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIM 309
Query: 442 KDEIFGPVQSILKY 455
+E FGPV ++ +
Sbjct: 310 HEETFGPVLPVVAF 323
|
Length = 409 |
| >gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Score = 272 bits (697), Expect = 1e-86
Identities = 142/381 (37%), Positives = 192/381 (50%), Gaps = 24/381 (6%)
Query: 87 DPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146
P TG+ + + + DV A + AR A W ER+ + LRF DL+ DE
Sbjct: 2 APFTGEPLGELPQSTPADVEAAFARARAAQRA--WAARPFAERAAVFLRFHDLVLERRDE 59
Query: 147 IAALETWDNGK----PFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQT--- 199
+ L + GK FE+ V + R YYA A+++ G V T
Sbjct: 60 LLDLIQLETGKARRHAFEEVLD--VAIVAR---YYARRAERLLK-PRRRRGAIPVLTRTT 113
Query: 200 -LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGL 258
P GV G I PWN+PL + PAL GN +VLK QT L+AL+ +LL EAGL
Sbjct: 114 VNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALTALWAVELLIEAGL 173
Query: 259 PPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS 318
P + +V+G G G A+ + D + FTGST TG++V + A L +LELGGK+
Sbjct: 174 PRDLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTATGRVVAERAG-RRLIGCSLELGGKN 230
Query: 319 PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 378
P IV EDAD+DKAA A A F N GQ C + R +VHESVYD+FV + A +G
Sbjct: 231 PMIVLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGA 290
Query: 379 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER---LGAKGYYIKPTVFTGVK 435
G G I Q +++ ++ V GA + GG LG Y+ +PTV TGV
Sbjct: 291 ALDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGRARPDLGP--YFYEPTVLTGVT 348
Query: 436 DDMLIAKDEIFGPVQSILKYK 456
+DM + +E FGPV SI +
Sbjct: 349 EDMELFAEETFGPVVSIYRVA 369
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454 |
| >gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Score = 271 bits (695), Expect = 2e-86
Identities = 143/375 (38%), Positives = 202/375 (53%), Gaps = 14/375 (3%)
Query: 87 DPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146
+P G+VI V + D A++ AR + + +ER I+ R ADLL++ +E
Sbjct: 5 NPYDGEVIGKVPADDRADAEEALATARAGAEN--RRALPPHERMAILERAADLLKKRAEE 62
Query: 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQ-----TLH 201
A + + GKP + A+ EV R A A++I+G P D T+
Sbjct: 63 FAKIIACEGGKPIKD-ARVEVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIR 121
Query: 202 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPG 261
EP+GV I P+NFPL + A K+ PA+A G +VLK A +TPLSAL ++K+L EAG+P G
Sbjct: 122 EPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEAGVPEG 181
Query: 262 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321
VL +V+G G A A+ V L+FTGS G+ L A + K + LELGG +P I
Sbjct: 182 VLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGE---ALRANAGGKRIALELGGNAPVI 238
Query: 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381
V DAD+D A E F++ GQ C + R +VHE +YD+F+E A K VGDP
Sbjct: 239 VDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLD 298
Query: 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIA 441
GP I E E++ +++ V+ GA+L GGER GA KPTV V D ++
Sbjct: 299 EDTDVGPLISEEAAERVERWVEEAVEAGARLLCGGERDGA---LFKPTVLEDVPRDTKLS 355
Query: 442 KDEIFGPVQSILKYK 456
+E FGPV I++Y
Sbjct: 356 TEETFGPVVPIIRYD 370
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453 |
| >gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Score = 269 bits (691), Expect = 8e-86
Identities = 133/373 (35%), Positives = 177/373 (47%), Gaps = 9/373 (2%)
Query: 88 PRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI 147
P G VI E V A+ AR A W + ER I+ R +LL + DEI
Sbjct: 3 PIDGSVIAERPLASLEAVRAALERARAAQKG--WRAVPLEERKAIVTRAVELLAANTDEI 60
Query: 148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK-IQGLTAPADGPYHVQTLHEPIGV 206
A TW G+P Q+ E+ RY A++ + + P + EP+GV
Sbjct: 61 AEELTWQMGRPIAQAGG-EIRGMLERARYMISIAEEALADIRVPEKDGFERYIRREPLGV 119
Query: 207 AGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIV 266
I PWN+P L V PAL GN ++LK + QTPL + EAGLP GV ++
Sbjct: 120 VLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGERFAAAFAEAGLPEGVFQVL 179
Query: 267 SGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDA 326
T AAL + +D ++FTGS G+ + Q AA V LELGGK P V DA
Sbjct: 180 HLSHET-SAALIADPRIDHVSFTGSVAGGRAI-QRAAAGRFIKVGLELGGKDPAYVRPDA 237
Query: 327 DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQ 386
D+D AAE FFN GQ CC+ R +VHES+YD FVE A+ +GDP
Sbjct: 238 DLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTL 297
Query: 387 GPQIDSEQFEKILKYIRSGVDGGAKLETGGERL---GAKGYYIKPTVFTGVKDDMLIAKD 443
GP + + + + I + GA+ G A G Y+ PTV T V M + ++
Sbjct: 298 GPVVSARAADFVRAQIADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMRE 357
Query: 444 EIFGPVQSILKYK 456
E FGPV I+K K
Sbjct: 358 ETFGPVVGIMKVK 370
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452 |
| >gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Score = 269 bits (690), Expect = 8e-86
Identities = 138/376 (36%), Positives = 196/376 (52%), Gaps = 17/376 (4%)
Query: 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145
+P TG+V+ V G E + A++ A +T Y+RS I+ + A LLE +
Sbjct: 4 RNPYTGEVVGTVPAGTEEALREALALAA-----SYRSTLTRYQRSAILNKAAALLEARRE 58
Query: 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-----GPYHVQTL 200
E A L T ++G + + EV + R+ A A + G + D + TL
Sbjct: 59 EFARLITLESGLCL-KDTRYEVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTL 117
Query: 201 HEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPP 260
EP+GV I P+N PL A K+ PA+A N IVLK +E+TPLSA+Y++ LL+EAGLPP
Sbjct: 118 REPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYEAGLPP 177
Query: 261 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPF 320
+L++V+G G L +H +VD + FTG GK + AA + K LELGG P
Sbjct: 178 DMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAI---AATAGYKRQLLELGGNDPL 234
Query: 321 IVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380
IV +DAD+++AA LA + N GQ C A R VHESV D+FV+ + VVGDP
Sbjct: 235 IVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPM 294
Query: 381 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLI 440
G ID E +I + + GA++ G +R GA PTV V D +
Sbjct: 295 DPATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQRQGA---LYAPTVLDHVPPDAEL 351
Query: 441 AKDEIFGPVQSILKYK 456
+E FGPV +++ K
Sbjct: 352 VTEETFGPVAPVIRVK 367
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451 |
| >gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family | Back alignment and domain information |
|---|
Score = 267 bits (683), Expect = 2e-84
Identities = 150/400 (37%), Positives = 221/400 (55%), Gaps = 15/400 (3%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
++LLI+G+ V ++G TFPT++P T +V+ A+ A D++ A++AAR+AFDE W R T
Sbjct: 1 SRLLIDGKLVAGSAG-TFPTVNPATEEVLGVAADATAADMDAAIAAARRAFDETDWSRDT 59
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKP--FEQSAQTEVPMTTRLFRYYAGWADK 183
A R + + + D L H +E+ L + G P AQ E P+ + A A+
Sbjct: 60 AL-RVRCLRQLRDALRAHVEELRELTIAEVGAPRMLTAGAQLEGPVDD--LGFAADLAES 116
Query: 184 IQ-----GLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 238
G+ +P P E +GV G I PWNFP + K+GPALA GNT+VLK
Sbjct: 117 YAWTTDLGVASPMGIPTRRTLRREAVGVVGAITPWNFPHQINLAKLGPALAAGNTVVLKP 176
Query: 239 AEQTPLSALYVSKLLHE-AGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 297
A TP A + +L+ E PPGV+NIV+ GA LA VD ++FTGST TG+
Sbjct: 177 APDTPWCAAVLGELIAEHTDFPPGVVNIVTSSDHRLGALLAKDPRVDMVSFTGSTATGRA 236
Query: 298 VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHE 357
V+ AA + LK V LELGGKS FIV +DAD+ A +A + + + GQ C +R V
Sbjct: 237 VMADAAAT-LKKVFLELGGKSAFIVLDDADLAAACSMAAFTVCMHAGQGCAITTRLVVPR 295
Query: 358 SVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE 417
+ YD+ V A A GDP G GP I + Q +++ Y+ V G + GG
Sbjct: 296 ARYDEAVAAAAATMGSIKPGDPADPGTVCGPVISARQRDRVQSYLDLAVAEGGRFACGGG 355
Query: 418 RLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 455
R +G++++PTV G+ ++ +A++EIFGPV +++ +
Sbjct: 356 RPADRDRGFFVEPTVIAGLDNNARVAREEIFGPVLTVIAH 395
|
This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480 |
| >gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Score = 249 bits (639), Expect = 4e-78
Identities = 135/380 (35%), Positives = 188/380 (49%), Gaps = 17/380 (4%)
Query: 83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142
+P TG+V+ VA +D+ A++AA KAF P + A+ R+ I+L LE
Sbjct: 1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFR--PMRALPAHRRAAILLHCVARLEE 58
Query: 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGP-----YHV 197
+E+A + GKP + A+ EV FR A A +I G P D
Sbjct: 59 RFEELAETIVLEAGKPIKD-ARGEVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQG 117
Query: 198 QTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG 257
PIG I P+NFPL + A KV PA+A G VLK A +TPLSAL + ++L E G
Sbjct: 118 LVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASRTPLSALILGEVLAETG 177
Query: 258 LPPGVLNIVSGYGPTAGAA-LASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGG 316
LP G +++ A L + + L+FTGS G + A K K V LELGG
Sbjct: 178 LPKGAFSVLPC--SRDDADLLVTDERIKLLSFTGSPAVGWDLKARAGK---KKVVLELGG 232
Query: 317 KSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 376
+ IV DAD+D AA+ + F+ GQ C + R VH SVYD+F + A
Sbjct: 233 NAAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKT 292
Query: 377 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKD 436
GDP GP I + E++ ++ VD GAKL TGG+R G ++PT+ V
Sbjct: 293 GDPKDDATDVGPMISESEAERVEGWVNEAVDAGAKLLTGGKR---DGALLEPTILEDVPP 349
Query: 437 DMLIAKDEIFGPVQSILKYK 456
DM + +E+FGPV ++ Y
Sbjct: 350 DMEVNCEEVFGPVVTVEPYD 369
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452 |
| >gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Score = 249 bits (637), Expect = 3e-77
Identities = 139/397 (35%), Positives = 204/397 (51%), Gaps = 15/397 (3%)
Query: 68 LLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
L+ING+ V++ + +++P +V+ V++ E A+ AA KAF+ W +
Sbjct: 35 LVINGERVETEN--KIVSINPCDKSEVVGTVSKASQEHAEHALQAAAKAFEA--WKKTDP 90
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI-- 184
ER+ I+ + A ++ R E +AL + GKP+ + A EV YYA ++
Sbjct: 91 EERAAILFKAAAIVRRRRHEFSALLVKEVGKPWNE-ADAEVAEAIDFMEYYARQMIELAK 149
Query: 185 QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
+G + Q ++ P GV I PWNFP + + GN +VLK AE P+
Sbjct: 150 GKPVNSREGETN-QYVYTPTGVTVVISPWNFPFAIMVGMTVAPIVTGNCVVLKPAEAAPV 208
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
A ++L EAGLP GV+ V G G G L H + + FTGS G + + AAK
Sbjct: 209 IAAKFVEILEEAGLPKGVVQFVPGSGSEVGDYLVDHPKTSLITFTGSREVGTRIFERAAK 268
Query: 305 -----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
+LK V E+GGK IV EDAD++ AA+ A + F GQ C AGSR VHE V
Sbjct: 269 VQPGQKHLKRVIAEMGGKDTVIVDEDADIELAAQSAFTSAFGFAGQKCSAGSRAVVHEKV 328
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 419
YD+ VE+ + VG P + GP ID + F KI++YI G G +L +GG
Sbjct: 329 YDEVVERFVEITESLKVGPPDSADVYVGPVIDQKSFNKIMEYIEIGKAEG-RLVSGGCGD 387
Query: 420 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
+KGY+I PT+F V +A++EIFGPV + ++
Sbjct: 388 DSKGYFIGPTIFADVDRKARLAQEEIFGPVVAFIRAS 424
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511 |
| >gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Score = 245 bits (627), Expect = 3e-76
Identities = 123/392 (31%), Positives = 187/392 (47%), Gaps = 36/392 (9%)
Query: 87 DPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146
DP TG + V EDV+ A++AAR A E W + + ER K++ + + +E
Sbjct: 2 DPATGQHLGSVPADTPEDVDEAIAAARAAQRE--WAKTSFAERRKVLRSLLKYILENQEE 59
Query: 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA-------PADGPYHVQT 199
I + D GK ++ E+ + T +KI+ P P +
Sbjct: 60 ICRVACRDTGKTMVDASLGEI-LVT---------CEKIRWTLKHGEKALRPESRPGGLLM 109
Query: 200 LH-------EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY---- 248
+ EP+GV G I+ WN+P + AL GN IV+K +EQ S+ +
Sbjct: 110 FYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWSSGFFLSI 169
Query: 249 VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLK 308
+ + L G P ++ +V+ T AL SH +D + F GS GK V+ AA+S L
Sbjct: 170 IRECLAACGHDPDLVQLVTCLPET-AEALTSHPVIDHITFIGSPPVGKKVMAAAAES-LT 227
Query: 309 PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKAN 368
PV LELGGK P IV +DAD+D+ A + F + GQ C R VHE +YD+ +E
Sbjct: 228 PVVLELGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILT 287
Query: 369 ALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER----LGAKGY 424
G P G + G I +F+++ + + V+ GA+L GG+R +G+
Sbjct: 288 DRVQALRQGPPLDGDVDVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQGH 347
Query: 425 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
Y PT+ V DM IA++E+FGPV ++K
Sbjct: 348 YFPPTLLVDVTPDMKIAQEEVFGPVMVVMKAS 379
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465 |
| >gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Score = 239 bits (611), Expect = 9e-74
Identities = 125/387 (32%), Positives = 189/387 (48%), Gaps = 17/387 (4%)
Query: 78 ASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFA 137
G ++ P G+ I V + ED + AA++AF E W + A +R +I+ +
Sbjct: 9 GGGGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFKE--WRDVPAPKRGEIVRQIG 66
Query: 138 DLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHV 197
D L + + + L + + GK EV + + G + ++ GLT P++ P H
Sbjct: 67 DALRKKKEALGKLVSLEMGKIL-PEGLGEVQEMIDICDFAVGLSRQLYGLTIPSERPGHR 125
Query: 198 QTLHE---PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKL-- 252
+ E P+GV G I +NFP+ ++ W AL CGN +V K + TPL+A+ V+K+
Sbjct: 126 --MMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSPTTPLTAIAVTKIVA 183
Query: 253 --LHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPV 310
L + GLP + ++V G G G AL V ++FTGST G+ V Q A
Sbjct: 184 RVLEKNGLPGAIASLVCG-GADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAA-RFGRS 241
Query: 311 TLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANAL 370
LELGG + IV EDAD+D A +A GQ C R VHES+YD+ +E+
Sbjct: 242 LLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKK- 300
Query: 371 AMKRV-VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPT 429
A K+V +GDP G GP + L I G + GG+ + G Y++PT
Sbjct: 301 AYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPT 360
Query: 430 VFTGVKDDMLIAKDEIFGPVQSILKYK 456
+ G+ D I K+E F P+ +LK+
Sbjct: 361 IVEGLS-DAPIVKEETFAPILYVLKFD 386
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474 |
| >gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Score = 230 bits (587), Expect = 5e-70
Identities = 132/397 (33%), Positives = 206/397 (51%), Gaps = 14/397 (3%)
Query: 68 LLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
L+I G++VD+ ++ P +V+ A+ + + A+ AA AF W
Sbjct: 21 LVIGGEWVDTKERMV--SVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFKT--WKDWPQ 76
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
+R++++L+ ADLL R E+ A T++ GK + + A +V RYYA A +++
Sbjct: 77 EDRARLLLKAADLLRRRRRELIATLTYEVGKNWVE-AIDDVAEAIDFIRYYARAALRLRY 135
Query: 187 --LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
+ ++ + +G I PWNFP+ +F + +A GNT++ K AE +
Sbjct: 136 PAVEVVPYPGEDNESFYVGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVV 195
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
V ++ HEAG PPGV+ + G G GA L H + + FTGS TGK + + AA+
Sbjct: 196 VGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAAAR 255
Query: 305 -----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
+ K + +E GGK+ IV E AD + E + F QGQ C A SR + +
Sbjct: 256 LAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGA 315
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 419
Y+ +E+ A + VG P + G GP ID+EQ K+L YI G + G +L GG+RL
Sbjct: 316 YEPVLERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRL 374
Query: 420 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
+GY++ PTV V IA++EIFGPV S+++YK
Sbjct: 375 EGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYK 411
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500 |
| >gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 219 bits (561), Expect = 1e-66
Identities = 133/378 (35%), Positives = 185/378 (48%), Gaps = 22/378 (5%)
Query: 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
T++P TG+ + ++V+ A++ A F + + T +R++ ADLLE
Sbjct: 5 TINPATGETVKTFTALTDDEVDAAIARAHARFRD--YRTTTFAQRARWANAAADLLEAEA 62
Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA--PAD----GPYHVQ 198
D++AAL T + GK SA+ E + FRYYA + + L A PAD G
Sbjct: 63 DQVAALMTLEMGKTL-ASAKAEALKCAKGFRYYA---EHAEALLADEPADAAAVGASRAY 118
Query: 199 TLHEPIGVAGQIIPWNFPLLMFAWKV----GPALACGNTIVLKTAEQTPLSALYVSKLLH 254
++P+GV ++PWNFPL W+V PAL GN +LK A P +ALY++ L
Sbjct: 119 VRYQPLGVVLAVMPWNFPL----WQVVRFAAPALMAGNVGLLKHASNVPQTALYLADLFR 174
Query: 255 EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLEL 314
AG P G + G A A+ V TGS G+ V +A +K LEL
Sbjct: 175 RAGFPDGCFQTLL-VGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDE-IKKTVLEL 232
Query: 315 GGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 374
GG PFIV AD+D+AAE A A N GQ C A R VH VYD F EK A
Sbjct: 233 GGSDPFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAAL 292
Query: 375 VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGV 434
VGDP GP + +++ K + V GA + GG+R G++ PTV T +
Sbjct: 293 RVGDPTDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDI 352
Query: 435 KDDMLIAKDEIFGPVQSI 452
DM + +E+FGPV S+
Sbjct: 353 TPDMRLYTEEVFGPVASL 370
|
Length = 457 |
| >gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 219 bits (560), Expect = 3e-66
Identities = 135/395 (34%), Positives = 193/395 (48%), Gaps = 20/395 (5%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
L I G+ V + P G V+ V + +DV RA + A A+ P +T Y
Sbjct: 6 LRIAGEKVSR--DRVIEVRYPYNGTVVGTVPKASVDDVRRAFAIAA-AYR----PTLTRY 58
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
ERS I+ R A LL +EI+ L T ++G ++ + EV + + A A + G
Sbjct: 59 ERSAILDRAAALLAARKEEISDLITLESGLS-KKDSLYEVGRVADVLTFAAAEALRDDGQ 117
Query: 188 T-----APADGPYHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
P V T EP+ GV I P+N P+ A K+ PA+A N +V+K +E+
Sbjct: 118 IFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEK 177
Query: 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
TPLSALY++ +L+EAGLPP +L +V+G L ++ VD + FTG GK +
Sbjct: 178 TPLSALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYI--- 234
Query: 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
AA++ + LELGG P IV EDAD+D+AA+LA + N GQ C A R V ESV D
Sbjct: 235 AARAGYRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVAD 294
Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 421
+F E GDP + G ID + + GA+L G R GA
Sbjct: 295 RFTELLVEKTRAWRYGDPMDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVRDGA 354
Query: 422 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
PTV V M + ++E FGPV ++++
Sbjct: 355 ---LYAPTVLDRVDPSMTLVREETFGPVSPVIRFC 386
|
This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472 |
| >gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Score = 213 bits (546), Expect = 1e-63
Identities = 131/402 (32%), Positives = 196/402 (48%), Gaps = 32/402 (7%)
Query: 69 LINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
+ING+ ++ G P +DP I V+ +AEDV+ A++ A AF W
Sbjct: 36 IINGEETETGEGA--PVIDPADHERTIGEVSLADAEDVDAALAIAAAAFAG--WSATPVE 91
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
ER++I+ + ADLLE + E+ AL + GK A EV RYYA A ++
Sbjct: 92 ERAEILEKAADLLEANRGELIALAAAEAGKTLAD-ADAEVREAIDFCRYYAAQARELFSD 150
Query: 188 TAPADGPYHVQTLH-EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
+ L GV I PWNFPL +F ++ ALA GNT++ K AEQTPL A
Sbjct: 151 PELPGPTGELNGLELHGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIA 210
Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ-LAAKS 305
+LLHEAG+P VL +V G G G AL +H +D + FTGST T K++ + LA +
Sbjct: 211 ARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERD 270
Query: 306 N-LKPVTLELGGKSPFIVCEDADVDKA-AELAHYALFFNQGQCCCAGSRTFVHESVYDQF 363
+ P+ E GGK+ IV A ++A ++ A F + GQ C A ++ E + ++F
Sbjct: 271 GPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSA-FGSAGQRCSALRLLYLQEEIAERF 329
Query: 364 VE--KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL-- 419
+E K ++K VGDP+ GP ID + + + +L G L
Sbjct: 330 IEMLKGAMASLK--VGDPWDLSTDVGPLIDKPAGKLLRAHT--------ELMRGEAWLIA 379
Query: 420 -----GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
GY++ P + V L E+FGP+ ++++K
Sbjct: 380 PAPLDDGNGYFVAPGIIEIVGIFDL--TTEVFGPILHVIRFK 419
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518 |
| >gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 209 bits (534), Expect = 2e-62
Identities = 126/393 (32%), Positives = 196/393 (49%), Gaps = 11/393 (2%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
I G+F + ASG P +P T +V T VA ++V+ AV++AR+ F W + +
Sbjct: 2 NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETF--LTWGQTSL 59
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
+R+ ++LR+ LL+ H DEIA L T ++GK A +V + + G ++G
Sbjct: 60 AQRTSVLLRYQALLKEHRDEIAELITAEHGKTHS-DALGDVARGLEVVEHACGVNSLLKG 118
Query: 187 LTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
T+ V ++ +P+GV I P+NFP ++ W A+ACGNT VLK +E+ P +
Sbjct: 119 ETSTQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSA 178
Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
A+ +++L EAG P GVLN+V G A L H +V ++F GST G+ + +
Sbjct: 179 AVKLAELFSEAGAPDGVLNVVHG-DKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSAH 237
Query: 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365
K V G K+ +V DAD D AA+ A + GQ C A S V D++V
Sbjct: 238 G-KRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAIS-AAVLVGAADEWVP 295
Query: 366 KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY- 424
+ A K +G G + GP I + +++ I G GA++ G GY
Sbjct: 296 EIRERAEKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYE 355
Query: 425 ---YIKPTVFTGVKDDMLIAKDEIFGPVQSILK 454
++ PT+ V M ++EIFGPV +L+
Sbjct: 356 EGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLE 388
|
Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477 |
| >gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Score = 207 bits (528), Expect = 5e-62
Identities = 124/363 (34%), Positives = 183/363 (50%), Gaps = 24/363 (6%)
Query: 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163
V+ AV+AAR AF W ++ ER+ I+ RFA+LL+ + +E+A L + + GKP + A
Sbjct: 1 QVDAAVAAARAAFPG--WAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWE-A 57
Query: 164 QTEVP-------MTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFP 216
QTEV ++ + + G + T A G ++ H P GV P+NFP
Sbjct: 58 QTEVAAMAGKIDISIKAYHERTG-----ERATPMAQGRAVLR--HRPHGVMAVFGPFNFP 110
Query: 217 LLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAA 276
+ + PAL GNT+V K +E TP A + +L EAGLPPGVLN+V G G G A
Sbjct: 111 GHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVLNLVQG-GRETGEA 169
Query: 277 LASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAH 336
LA+H +D L FTGS TG ++ + A K + LE+GG +P +V + AD+D AA L
Sbjct: 170 LAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIV 229
Query: 337 YALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQF 395
+ F GQ C R V + V D F+E+ A + +G P GP I +
Sbjct: 230 QSAFLTAGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAA 289
Query: 396 EKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVF--TGVKDDMLIAKDEIFGPVQSIL 453
+ L + + G + ERL A ++ P + T D + +EIFGP+ +
Sbjct: 290 ARYLLAQQDLLALGGEPLLAMERLVAGTAFLSPGIIDVTDAAD---VPDEEIFGPLLQVY 346
Query: 454 KYK 456
+Y
Sbjct: 347 RYD 349
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431 |
| >gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Score = 205 bits (523), Expect = 3e-61
Identities = 115/364 (31%), Positives = 174/364 (47%), Gaps = 39/364 (10%)
Query: 108 AVSAARKAFDEG-----PWPRMTAYERSKIILRFADLLERHNDEI-AALETWDNGKPFEQ 161
V+ R+ F G W R + +L + +EI AAL D GKP +
Sbjct: 3 LVARLRETFLTGKTRSLEW-------RKAQLKALKRMLTENEEEIAAALYA-DLGKPPAE 54
Query: 162 SAQTEVPMTTRLFRYY----AGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPL 217
+ TE+ + + W + P + EP+GV I PWN+PL
Sbjct: 55 AYLTEIAVVLGEIDHALKHLKKWMKPRRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPL 114
Query: 218 -LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAA 276
L A +G A+A GNT+VLK +E P ++ ++KL+ + P + +V G A A
Sbjct: 115 QLALAPLIG-AIAAGNTVVLKPSELAPATSALLAKLIPKY-FDPEAVAVVEGGVEVATAL 172
Query: 277 LASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAH 336
LA D + FTGS GKIV++ AAK +L PVTLELGGKSP IV +DA+++ AA
Sbjct: 173 LAEPF--DHIFFTGSPAVGKIVMEAAAK-HLTPVTLELGGKSPCIVDKDANLEVAARRIA 229
Query: 337 YALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQ----IDS 392
+ F N GQ C A VHES+ D+ +E +K+ + + + ++ P I+
Sbjct: 230 WGKFLNAGQTCIAPDYVLVHESIKDELIE-----ELKKAIKEFYGEDPKESPDYGRIINE 284
Query: 393 EQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSI 452
F+++ + K+ GG+ + YI PT+ V D + ++EIFGP+ I
Sbjct: 285 RHFDRLASLL-----DDGKVVIGGQV-DKEERYIAPTILDDVSPDSPLMQEEIFGPILPI 338
Query: 453 LKYK 456
L Y
Sbjct: 339 LTYD 342
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426 |
| >gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Score = 195 bits (499), Expect = 1e-57
Identities = 126/362 (34%), Positives = 178/362 (49%), Gaps = 32/362 (8%)
Query: 107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTE 166
+A + A +A TA ER + R + +EI A D KP + TE
Sbjct: 8 QAHALALRAS--------TAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTE 59
Query: 167 V-PMTTRL---FRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFA 221
+ P+ + + ++ W K + + P + +EP GV I PWN+P F
Sbjct: 60 ILPVLSEINHAIKHLKKWM-KPKRVRTPLLLFGTKSKIRYEPKGVCLIISPWNYP---FN 115
Query: 222 WKVGP---ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA 278
GP A+A GNT +LK +E TP ++ ++K++ EA + + G A A L
Sbjct: 116 LAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREA-FDEDEVAVFEGDAEVAQALLE 174
Query: 279 SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 338
+ D + FTGS GKIV+ AAK +L VTLELGGKSP IV E AD+ KAA+ +
Sbjct: 175 --LPFDHIFFTGSPAVGKIVMAAAAK-HLASVTLELGGKSPTIVDETADLKKAAKKIAWG 231
Query: 339 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQ----IDSEQ 394
F N GQ C A FVHESV D FVE A +++ G + P ++
Sbjct: 232 KFLNAGQTCIAPDYVFVHESVKDAFVEHLKA-EIEKFYGK--DAARKASPDLARIVNDRH 288
Query: 395 FEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 454
F+++ + V GAK+E GG+ A YI PTV T V DM I ++EIFGPV I+
Sbjct: 289 FDRLKGLLDDAVAKGAKVEFGGQ-FDAAQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIIT 347
Query: 455 YK 456
Y+
Sbjct: 348 YE 349
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433 |
| >gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Score = 192 bits (488), Expect = 2e-55
Identities = 123/394 (31%), Positives = 179/394 (45%), Gaps = 24/394 (6%)
Query: 69 LINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
+I + + P +P D++ V V A+ +A++AF W A
Sbjct: 41 IIGHSYKADGEAQ--PVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFPT--WNATPAK 96
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
ER+ + R ADLLE H E+ AL + GK +A EV RYYA + G
Sbjct: 97 ERAAKLDRLADLLELHMPELMALCVREAGKTI-HNAIAEVREAVDFCRYYAKQVRDVLG- 154
Query: 188 TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247
+ E GV I PWNFPL +F ++ ALA GNT++ K AEQT L A
Sbjct: 155 ----------EFSVESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAY 204
Query: 248 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 307
+L+ EAG P G + ++ G G GAAL S + +AFTGST +++ Q A+
Sbjct: 205 RAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQRED 264
Query: 308 KPVTL--ELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365
PV L E GG++ IV A ++ + F + GQ C A V E V D+ +
Sbjct: 265 APVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLT 324
Query: 366 KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG---AKLETGGERLGAK 422
+ VG P GP ID+E + +L +I A+L R
Sbjct: 325 MIQGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQH 384
Query: 423 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
G ++ PT+F DD+ +E+FGPV +++YK
Sbjct: 385 GTFVAPTLFE--LDDIAELSEEVFGPVLHVVRYK 416
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500 |
| >gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 188 bits (481), Expect = 4e-55
Identities = 113/360 (31%), Positives = 172/360 (47%), Gaps = 33/360 (9%)
Query: 113 RKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIA-ALETWDNGKPFEQSAQTEVPMTT 171
+ AF P P + ER + R LL + D +A A+ + ++ E+ +
Sbjct: 8 KAAFLANPPP--SLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSI 65
Query: 172 RLFRYY----AGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP- 226
++ W + P + ++P+GV G I+PWN+PL + +GP
Sbjct: 66 AGIKHARKHLKKWMKPSRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYL---ALGPL 122
Query: 227 --ALACGNTIVLKTAEQTP-LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 283
ALA GN +++K +E TP SAL +++LL E + +V+G G AA S +
Sbjct: 123 IAALAAGNRVMIKPSEFTPRTSAL-LAELLAEY-FDEDEVAVVTG-GADVAAAF-SSLPF 178
Query: 284 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 343
D L FTGST G+ V++ AA+ NL PVTLELGGKSP I+ DAD+ KAAE + N
Sbjct: 179 DHLLFTGSTAVGRHVMRAAAE-NLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLNA 237
Query: 344 GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQ----IDSEQFEKIL 399
GQ C A V E ++FV A A A+ ++ + P I+ + ++
Sbjct: 238 GQTCVAPDYVLVPEDKLEEFVAAAKA-AVAKMYPT-----LADNPDYTSIINERHYARLQ 291
Query: 400 KYIRSGVDGGAKLET---GGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
+ GA++ GE A + PT+ V DDM + ++EIFGP+ IL Y
Sbjct: 292 GLLEDARAKGARVIELNPAGEDFAATR-KLPPTLVLNVTDDMRVMQEEIFGPILPILTYD 350
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434 |
| >gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 187 bits (477), Expect = 5e-54
Identities = 133/413 (32%), Positives = 197/413 (47%), Gaps = 54/413 (13%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
L ING ++ G+ F + +P +G+V+ + A V+ AV AAR AF W R++
Sbjct: 3 LWINGDWIA-GQGEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFPA--WARLSFE 59
Query: 128 ERSKIILRFADLLERHNDEIA---ALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184
ER I+ RFA LLE + +E+A A ET GKP ++A TEV +KI
Sbjct: 60 ERQAIVERFAALLEENKEELAEVIARET---GKPLWEAA-TEV----------TAMINKI 105
Query: 185 QGLTAPADGPYHVQT--------------LHEPIGVAGQIIPWNFPLLMFAWKVGPALAC 230
++ A YH +T H P GV P+NFP + + PAL
Sbjct: 106 -AISIQA---YHERTGEKRSEMADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLA 161
Query: 231 GNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTG 290
GNT+V K +E TP A KL +AGLP GVLN+V G G G ALA+H ++D L FTG
Sbjct: 162 GNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTG 220
Query: 291 STTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAG 350
S TG ++ + A K + LE+GG +P ++ E AD+D A L + F + GQ C
Sbjct: 221 SANTGYLLHRQFAGQPEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCA 280
Query: 351 SRTFVHESVY-DQFVEKANALAMKRVVGDPFKGGIQQ-----GPQIDSEQFEKILKYIRS 404
R V + D F+ + A+A + VG + G I + + ++
Sbjct: 281 RRLLVPQGAQGDAFLARLVAVAKRLTVGRWD----AEPQPFMGAVISEQAAQGLVAAQAQ 336
Query: 405 GVDGGAKLETGGERLGAKGYYIKPTVF--TGVKDDMLIAKDEIFGPVQSILKY 455
+ G K +L A + P + TGV + + +E FGP+ +++Y
Sbjct: 337 LLALGGKSLLEMTQLQAGTGLLTPGIIDVTGVAE---LPDEEYFGPLLQVVRY 386
|
Length = 487 |
| >gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 192 bits (489), Expect = 6e-54
Identities = 131/393 (33%), Positives = 189/393 (48%), Gaps = 24/393 (6%)
Query: 69 LINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
++NG V A G+ P ++P D++ V E DV +A+ AA A W
Sbjct: 117 IVNGAPV--AGGEPRPVINPADPDDIVGTVTEATEADVEQALEAAVAAAPI--WSATPPA 172
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA-DKIQG 186
ER+ I+ R ADL+E ++ L + GK +A EV RYYAG A D
Sbjct: 173 ERAAILERAADLMEAQMPQLMGLLVREAGKTL-SNAIAEVREAVDFLRYYAGQARDTFGN 231
Query: 187 LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
LT H P+G I PWNFPL +F ++ ALA GN+++ K AEQTPL A
Sbjct: 232 LT------------HRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIA 279
Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306
+LLHEAG+PPGVL ++ G G T GAAL + V + FTGST +++ + AK
Sbjct: 280 AQAVRLLHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQ 339
Query: 307 LKPVTL--ELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
+P+ L E GG++ IV A ++ + F + GQ C A + E V D+ +
Sbjct: 340 GRPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRIL 399
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI-RSGVDGGAKLETGGERLGAKG 423
+ VG+P + GP ID+E I K+I G + KG
Sbjct: 400 TMLKGAMAELRVGNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKG 459
Query: 424 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
++ PT+ D L + E+FGPV +++YK
Sbjct: 460 TFVAPTLIELENLDEL--QREVFGPVLHVVRYK 490
|
Length = 769 |
| >gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 191 bits (489), Expect = 3e-53
Identities = 145/402 (36%), Positives = 202/402 (50%), Gaps = 39/402 (9%)
Query: 75 VDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKII 133
+ + G+ P + P V+ VA +AE V +A++AAR AF W R ER+ I+
Sbjct: 556 IINGEGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFPA--WSRTPVEERAAIL 613
Query: 134 LRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG----LTA 189
R ADLLE + E+ AL + GK Q A EV RYYA A ++ G L
Sbjct: 614 ERAADLLEANRAELIALCVREAGKTL-QDAIAEVREAVDFCRYYAAQARRLFGAPEKLPG 672
Query: 190 PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 249
P G + LH GV I PWNFPL +F +V ALA GNT++ K AEQTPL A
Sbjct: 673 P-TGESNELRLH-GRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEA 730
Query: 250 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ-LAAKSNLK 308
KLLHEAG+P VL ++ G G T GAAL + + +AFTGST T +I+ + LAA+
Sbjct: 731 VKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDG-P 789
Query: 309 PVTL--ELGGKSPFIVCEDA---------DVDKAAELAHYALFFNQGQCCCAGSRTFVHE 357
V L E GG++ IV D+ DV +A F + GQ C A FV E
Sbjct: 790 IVPLIAETGGQNAMIV--DSTALPEQVVDDVVTSA-------FRSAGQRCSALRVLFVQE 840
Query: 358 SVYDQFVEK-ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKL--ET 414
+ D+ +E A+A + VGDP GP ID+E + +I + A+L +
Sbjct: 841 DIADRVIEMLKGAMA-ELKVGDPRLLSTDVGPVIDAEAKANLDAHIER-MKREARLLAQL 898
Query: 415 GGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
G+++ PT F D + + E+FGP+ +++YK
Sbjct: 899 PLPAGTENGHFVAPTAFE--IDSISQLEREVFGPILHVIRYK 938
|
Length = 1038 |
| >gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Score = 183 bits (467), Expect = 6e-53
Identities = 93/260 (35%), Positives = 138/260 (53%), Gaps = 21/260 (8%)
Query: 202 EPIGVAGQIIPWNFPL-LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPP 260
EP GV I PWN+P L A +G A+A GNT VLK +E TP ++ ++K++ E
Sbjct: 99 EPYGVVLIIAPWNYPFQLALAPLIG-AIAAGNTAVLKPSELTPNTSKVIAKIIEET-FDE 156
Query: 261 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPF 320
+ +V G L D + FTGS GKIV++ AAK +L PVTLELGGKSP
Sbjct: 157 EYVAVVEGGVEENQELLDQKF--DYIFFTGSVRVGKIVMEAAAK-HLTPVTLELGGKSPC 213
Query: 321 IVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380
IV EDA++ AA+ + F N GQ C A VHESV ++F++ +K + +
Sbjct: 214 IVDEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLVHESVKEKFIK-----ELKEEIKKFY 268
Query: 381 KGGIQQGP---QIDSEQ-FEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKD 436
+ P +I +E+ F+++ + +G K+ GG + YI+PT+ V
Sbjct: 269 GEDPLESPDYGRIINEKHFDRLAGLLDNG-----KIVFGGNT-DRETLYIEPTILDNVTW 322
Query: 437 DMLIAKDEIFGPVQSILKYK 456
D + ++EIFGP+ +L Y
Sbjct: 323 DDPVMQEEIFGPILPVLTYD 342
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449 |
| >gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Score = 180 bits (460), Expect = 5e-52
Identities = 95/262 (36%), Positives = 142/262 (54%), Gaps = 23/262 (8%)
Query: 201 HEPIGVAGQIIPWNFPLLMFAWKVGP---ALACGNTIVLKTAEQTPLSALYVSKLLHEAG 257
EP+GV I PWN+P+L+ + P A+A G T+VLK +E TP +A +++L+ +
Sbjct: 106 KEPLGVVLIIGPWNYPVLL---ALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPKY- 161
Query: 258 LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 317
L P +V G P A L DK+ +TGS G+I+ + AAK +L PVTLELGGK
Sbjct: 162 LDPDAFQVVQGGVPETTALLEQKF--DKIFYTGSGRVGRIIAEAAAK-HLTPVTLELGGK 218
Query: 318 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 377
SP IV ++AD++ AA+ + F N GQ C A V SVYD+FVE +K+V+
Sbjct: 219 SPVIVTKNADLELAAKRILWGKFGNAGQICVAPDYVLVDPSVYDEFVE-----ELKKVLD 273
Query: 378 DPFKGGIQQGPQ----IDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTG 433
+ + GG P ++ F ++ + + K+ GGE A +I PT+ +
Sbjct: 274 EFYPGGANASPDYTRIVNPRHFNRLKSLLDT---TKGKVVIGGEMDEAT-RFIPPTIVSD 329
Query: 434 VKDDMLIAKDEIFGPVQSILKY 455
V D + +E+FGPV I+K
Sbjct: 330 VSWDDSLMSEELFGPVLPIIKV 351
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436 |
| >gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 188 bits (480), Expect = 6e-52
Identities = 136/406 (33%), Positives = 191/406 (47%), Gaps = 62/406 (15%)
Query: 76 DSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIIL 134
G T P L+P DV+ V E AEDV RA++AA+ AF E W A ER+ I+
Sbjct: 562 GDVDGGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFPE--WSATPAAERAAILE 619
Query: 135 RFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGP 194
R ADL+E H E+ AL + GK +A EV RYYA Q
Sbjct: 620 RAADLMEAHMPELFALAVREAGKTL-ANAIAEVREAVDFLRYYAA-----QARRLLNGPG 673
Query: 195 YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH 254
H+P+G I PWNFPL +F ++ AL GNT++ K AEQTPL A +LLH
Sbjct: 674 ------HKPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAARAVRLLH 727
Query: 255 EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTL-- 312
EAG+P L ++ G G T GAAL + + + FTGST +++ + AK + PV L
Sbjct: 728 EAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPLIA 787
Query: 313 ELGGKSPFIVCED---------ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 363
E GG++ IV D ADV +A F + GQ C A + E V D+
Sbjct: 788 ETGGQNAMIV--DSSALPEQVVADVIASA-------FDSAGQRCSALRVLCLQEDVADRV 838
Query: 364 VEKANAL--AMK-RVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL- 419
+ L AM +GDP++ GP ID+E I +I + G +
Sbjct: 839 LT---MLKGAMDELRIGDPWRLSTDVGPVIDAEAQANIEAHI-------EAMRAAGRLVH 888
Query: 420 -------GAKGYYIKPTVFTGVKD--DMLIAKDEIFGPVQSILKYK 456
KG ++ PT+ + D+ + E+FGPV ++++K
Sbjct: 889 QLPLPAETEKGTFVAPTLIE-IDSISDL---EREVFGPVLHVVRFK 930
|
Length = 1208 |
| >gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 177 bits (451), Expect = 1e-50
Identities = 125/396 (31%), Positives = 173/396 (43%), Gaps = 52/396 (13%)
Query: 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAF-DEGPWPRMTAYERSKIILRFADLLERHN 144
++P I V + +++A+ A F D W + A+ER I+ R ADL+E
Sbjct: 4 VNPFDLKPIGEVPTVDWAAIDKALDTAHALFLDRNNW--LPAHERIAILERLADLMEERA 61
Query: 145 DEIAALETWDNGKPF---------------------EQSAQTEVPMTTRLFRYYAGWADK 183
DE+A L + GKP Q E+PM
Sbjct: 62 DELALLIAREGGKPLVDAKVEVTRAIDGVELAADELGQLGGREIPM-------------- 107
Query: 184 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243
GLT + G T EPIGV I +N PL + +V PA+A G +++K A TP
Sbjct: 108 --GLTPASAGRI-AFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATP 164
Query: 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303
LS L LLHEAGLP G V A L + V +F GS G ++
Sbjct: 165 LSCLAFVDLLHEAGLPEGWCQAVPCENAVA-EKLVTDPRVAFFSFIGSARVGWML----- 218
Query: 304 KSNLKPVT---LELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
+S L P T LE GG +P IV AD+D F++ GQ C + R FV +
Sbjct: 219 RSKLAPGTRCALEHGGAAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIA 278
Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 420
D F ++ A A K VVGDP + GP I + +++ +++ V GA+L GG+RL
Sbjct: 279 DDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRLS 338
Query: 421 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
Y PTV D ++ EIFGPV + Y
Sbjct: 339 DTTY--APTVLLDPPRDAKVSTQEIFGPVVCVYSYD 372
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455 |
| >gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Score = 177 bits (449), Expect = 2e-49
Identities = 143/447 (31%), Positives = 220/447 (49%), Gaps = 22/447 (4%)
Query: 11 SRSFTSSSPTLFSRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITPPVKVDYTQLLI 70
S S T+++ T+ R ++L R + S S++ + P PP + LI
Sbjct: 64 SSSTTTTTTTMLLRISGNNL-RPLRPQFLALRSSWLSTSPEQSTQPQMPPRVPN----LI 118
Query: 71 NGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERS 130
G FV+S S ++P T +V++ V E+ AVSAA++AF W R
Sbjct: 119 GGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFPL--WRNTPITTRQ 176
Query: 131 KIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP 190
+++L+F +L+ ++ D++A T + GK + S ++ + + G A G P
Sbjct: 177 RVMLKFQELIRKNMDKLAMNITTEQGKTLKDS-HGDIFRGLEVVEHACGMATLQMGEYLP 235
Query: 191 -ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 249
++ EP+GV I P+NFP ++ W A+ CGNT +LK +E+ P +++ +
Sbjct: 236 NVSNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVIL 295
Query: 250 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKP 309
++L EAGLP GVLNIV G T A+ ++ ++F GS T G + AA K
Sbjct: 296 AELAMEAGLPDGVLNIVHGTNDTVN-AICDDEDIRAVSFVGSNTAGMHIYARAAAKG-KR 353
Query: 310 VTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR-TFVHE--SVYDQFVEK 366
+ +G K+ +V DA++D A F GQ C A S FV + S D+ VE+
Sbjct: 354 IQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGDAKSWEDKLVER 413
Query: 367 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY-- 424
A AL K G + GP I + E+I + I+SGVD GAKL G + GY
Sbjct: 414 AKAL--KVTCGSEPDADL--GPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEK 469
Query: 425 --YIKPTVFTGVKDDMLIAKDEIFGPV 449
+I PT+ +GV DM K+EIFGPV
Sbjct: 470 GNFIGPTILSGVTPDMECYKEEIFGPV 496
|
Length = 604 |
| >gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 173 bits (441), Expect = 6e-49
Identities = 125/399 (31%), Positives = 192/399 (48%), Gaps = 24/399 (6%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
L I+G++ G++F + +P T +V+ A A V AV+AAR AF W R++
Sbjct: 1 LFIDGKWRAGQ-GESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFPA--WARLSLE 57
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEV-PMTTRLFRYYAGWADKIQG 186
ER ++ RFA LLE + +A + + GKP ++ TEV M ++ + ++ G
Sbjct: 58 ERIAVVQRFAALLEERKEALARVIARETGKPLWETR-TEVASMIGKVAISIKAYHER-TG 115
Query: 187 LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
+ H P GV P+NFP + + PAL GNT+V K +E TP A
Sbjct: 116 ESENPMPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVA 175
Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306
KL +AGLP GVLN+V G G ALA+H ++D L FTGS+ TG ++ + A
Sbjct: 176 EETVKLWEKAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRP 234
Query: 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY-DQFVE 365
K + LE+GG +P IV E AD+D A L + F + GQ C R V + D F+
Sbjct: 235 EKILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLA 294
Query: 366 KANALAMKRVVGD------PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 419
+ +A + VG PF G + I + +++L + G K +L
Sbjct: 295 RLVEVAERLTVGAWDAEPQPFMGAV-----ISLQAAQRLLAAQAKLLALGGKSLLAMRQL 349
Query: 420 GAKGYYIKPTVF--TGVKDDMLIAKDEIFGPVQSILKYK 456
+ P + TGV + + +E FGP+ +++Y
Sbjct: 350 DPGAALLTPGIIDVTGVAE---LPDEEHFGPLLQVIRYD 385
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484 |
| >gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Score = 170 bits (431), Expect = 3e-47
Identities = 114/390 (29%), Positives = 185/390 (47%), Gaps = 23/390 (5%)
Query: 78 ASGKTFPTLDPRTGDVITHVAEGEAEDVN---RAVSAARKAFDEGPWPRMTAYERSKIIL 134
A+G +++P I V E ED RA A K W ++ A +R +I+
Sbjct: 31 ANGPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAKI-----WMQVPAPKRGEIVR 85
Query: 135 RFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGP 194
+ D L D + L + + GK + EV + + G + ++ G P++ P
Sbjct: 86 QIGDALRAKLDYLGRLVSLEMGKILAEGI-GEVQEIIDMCDFAVGLSRQLNGSIIPSERP 144
Query: 195 YHVQT-LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKL- 252
H+ + P+G+ G I +NFP + W AL CGN +V K A TPL + ++KL
Sbjct: 145 NHMMMEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAMTKLV 204
Query: 253 ---LHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKP 309
L + LP + G G G A+A + ++FTGS+ G +V Q +
Sbjct: 205 AEVLEKNNLPGAIFTSFCG-GAEIGEAIAKDTRIPLVSFTGSSKVGLMV-QQTVNARFGK 262
Query: 310 VTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANA 369
LEL G + IV +DAD+ A +A GQ C R +HES+YD +E+
Sbjct: 263 CLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLT 322
Query: 370 LAMKRVVGDPFKGGIQQGP---QIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYI 426
+ + +GDP + G GP + FEK ++ I+S G K+ TGG + ++G ++
Sbjct: 323 VYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKS---QGGKILTGGSAIESEGNFV 379
Query: 427 KPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
+PT+ + D + K+E+FGPV ++K+K
Sbjct: 380 QPTIVE-ISPDADVVKEELFGPVLYVMKFK 408
|
Length = 508 |
| >gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 169 bits (430), Expect = 3e-47
Identities = 126/423 (29%), Positives = 193/423 (45%), Gaps = 37/423 (8%)
Query: 51 AAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVS 110
A + D + +G++ S+SGK+ +P T V E+VN+A+
Sbjct: 1 MAGTGFFAEILDGDVYKYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAME 60
Query: 111 AARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMT 170
+A+ A + W + ++R++++ + A +L+ H IA + KP + A TEV +
Sbjct: 61 SAKAA--QKAWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKP-AKDAVTEVVRS 117
Query: 171 TRLFRYYAGWADKIQGLTAPADGPYHVQ-------------TLHEPIGVAGQIIPWNFPL 217
L Y A +G+ +G + V T P+GV I P+N+P+
Sbjct: 118 GDLISYTAE-----EGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPV 172
Query: 218 LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAAL 277
+ K+ PAL GN +VLK Q ++AL++ H AG P G+++ V+G G G L
Sbjct: 173 NLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFL 232
Query: 278 ASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHY 337
H V+ ++FTG T + ++ K+ + P+ +ELGGK IV EDAD+D AA
Sbjct: 233 TMHPGVNCISFTGGDTG----IAISKKAGMVPLQMELGGKDACIVLEDADLDLAAANIIK 288
Query: 338 ALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 397
F GQ C A V ESV D VEK NA K VG P + I E
Sbjct: 289 GGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGPP-----EDDCDITPVVSES 343
Query: 398 ILKYIRSGVDG----GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSIL 453
+I V GA +R +G I P + V+ DM IA +E FGPV ++
Sbjct: 344 SANFIEGLVMDAKEKGATFCQEWKR---EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVI 400
Query: 454 KYK 456
+
Sbjct: 401 RIN 403
|
Length = 496 |
| >gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Score = 161 bits (410), Expect = 3e-44
Identities = 119/399 (29%), Positives = 176/399 (44%), Gaps = 64/399 (16%)
Query: 93 VITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE-RHNDEIAALE 151
V+ +A V +A+ AA +A E W RM +R+ I L+ ADLL ++ E+ A
Sbjct: 59 VLATYHYADAALVEKAIEAALEARKE--WARMPFEDRAAIFLKAADLLSGKYRYELNAAT 116
Query: 152 TWDNGK-PFEQSAQTEVPMTTRL---FRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVA 207
GK + Q E+ L R+ +A+++ Y Q L P GV
Sbjct: 117 MLGQGKNVW----QAEIDAACELIDFLRFNVKYAEEL----------YAQQPLSSPAGVW 162
Query: 208 GQ------------IIPWNF----------PLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
+ + P+NF P LM GN ++ K ++ LS
Sbjct: 163 NRLEYRPLEGFVYAVSPFNFTAIGGNLAGAPALM-----------GNVVLWKPSDTAVLS 211
Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTT-----GKIVLQ 300
V K+L EAGLPPGV+N V G GP G + + + L FTGST T +I
Sbjct: 212 NYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWKQIGEN 271
Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
L + E GGK+ +V ADVD F QGQ C A SR +V ES++
Sbjct: 272 LDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLW 331
Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI-RSGVDGGAKLETGGERL 419
+ E+ + +GDP G ID + F++I YI + D A++ GG+
Sbjct: 332 PEVKERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCD 391
Query: 420 GAKGYYIKPTVF--TGVKDDMLIAKDEIFGPVQSILKYK 456
+ GY+++PTV T K ++ +EIFGPV ++ Y
Sbjct: 392 DSVGYFVEPTVIETTDPKHKLM--TEEIFGPVLTVYVYP 428
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522 |
| >gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Score = 160 bits (407), Expect = 6e-44
Identities = 104/333 (31%), Positives = 164/333 (49%), Gaps = 15/333 (4%)
Query: 129 RSKIILRFADLLERHNDEI-AALETWDNGKPFEQSAQTEVPMTT----RLFRYYAGWADK 183
R + + +LE + E A+ D G+ ++ TEV +T L ++ +
Sbjct: 31 RKQQLRNLLRMLEENKQEFSEAVHK-DLGRHPFETKMTEVLLTVAEIEHLLKHLDEYLKP 89
Query: 184 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243
+ T GP + EP+GV I WN+PL + + A+A GNT+VLK +E +P
Sbjct: 90 EKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSP 149
Query: 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303
++ ++KLL + L P + ++ G L D + FTGS GK+V+Q AA
Sbjct: 150 HTSKLMAKLLTKY-LDPSYVRVIEGGVEVTTELLKEPF--DHIFFTGSPRVGKLVMQAAA 206
Query: 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 363
+ NL P TLELGGKSP IV + ++ AA + F N GQ C A VH S+ D+F
Sbjct: 207 E-NLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGKFLNAGQTCVAPDYVLVHRSIKDKF 265
Query: 364 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 423
+E A A+K G+ K ++ +++ + I+ D G K+ GGE + +
Sbjct: 266 IE-ALKEAIKEFFGEDPKKSEDYSRIVNEFHTKRLAELIK---DHGGKVVYGGE-VDIEN 320
Query: 424 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
Y+ PT+ D + ++EIFGP+ IL Y+
Sbjct: 321 KYVAPTIIVNPDLDSPLMQEEIFGPILPILTYE 353
|
Length = 493 |
| >gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Score = 157 bits (399), Expect = 1e-42
Identities = 124/398 (31%), Positives = 182/398 (45%), Gaps = 14/398 (3%)
Query: 68 LLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
L+I G+ V + SG+ + P V+ E N+AV AA A E W +
Sbjct: 34 LVIGGEEVWT-SGERIYQVSPHNHQAVLAKATNATEELANKAVEAALDAKKE--WSLLPF 90
Query: 127 YERSKIILRFADLLE-RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
Y+R+ I L+ ADLL + EI A K Q+ V FR+ A +A ++
Sbjct: 91 YDRAAIFLKAADLLSGPYRAEILAATMLGQSKTVYQAEIDAVAELIDFFRFNAKYARELY 150
Query: 186 GLTAPADGPYHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
+ +T + P+ G I P+NF + PAL GNT++ K ++ L
Sbjct: 151 EQQPISAPGEWNRTEYRPLEGFVYAISPFNFTAIAGNLAGAPALM-GNTVIWKPSDTAML 209
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTT-----GKIVL 299
S V ++L EAGLPPGV+N V G GP + + ++ + FTGST T ++
Sbjct: 210 SNYLVMRILEEAGLPPGVINFVPGDGPLVSDTVLADPDLAGIHFTGSTPTFKHLWKQVAQ 269
Query: 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
L N + E GGK +V ADV+ F QGQ C A SR +V S+
Sbjct: 270 NLDRYHNFPRIVGETGGKDFHVVHPSADVEHVVSGTIRGAFEYQGQKCSACSRLYVPHSL 329
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLET--GGE 417
+ +F + A + VGDP G G ID + F KI+KYI + L GG+
Sbjct: 330 WPRFKGRLLAELSRVKVGDPDDFGTFMGAVIDEKSFAKIVKYIEHAKSDPSALTILAGGK 389
Query: 418 RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 455
+ GY+++PTV + K+EIFGPV ++ Y
Sbjct: 390 YDDSVGYFVEPTVVESKDPQEPLMKEEIFGPVLTVYVY 427
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532 |
| >gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 156 bits (395), Expect = 2e-42
Identities = 109/377 (28%), Positives = 170/377 (45%), Gaps = 23/377 (6%)
Query: 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144
+++P TG+ ++ + A+D+ A+ A F + W R++ + L +
Sbjct: 11 SVNPATGEQLSVLPWAGADDIENALQLAAAGFRD--WRETNIDYRAQKLRDIGKALRARS 68
Query: 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQT----- 199
+E+A + T + GKP Q A+ EV + L +YA G P V+
Sbjct: 69 EEMAQMITREMGKPINQ-ARAEVAKSANLCDWYAE-----HGPAMLKAEPTLVENQQAVI 122
Query: 200 LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLP 259
+ P+G I+PWNFPL P L GN +LK A A ++++ +AG+P
Sbjct: 123 EYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPNVMGCAQLIAQVFKDAGIP 182
Query: 260 PGVLNIVSGYGPTAGAALASHMEVDK----LAFTGSTTTGKIVLQLAAKSNLKPVTLELG 315
GV ++ A S M D + TGS G + A + LK LELG
Sbjct: 183 QGVYGWLN-----ADNDGVSQMINDSRIAAVTVTGSVRAGAAIGAQAGAA-LKKCVLELG 236
Query: 316 GKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 375
G PFIV DAD++ A + A + N GQ C A R + E + F E+ A A
Sbjct: 237 GSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALK 296
Query: 376 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVK 435
+GDP GP + +++ + + + GA+L GGE++ G Y PTV V
Sbjct: 297 MGDPRDEENALGPMARFDLRDELHHQVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVT 356
Query: 436 DDMLIAKDEIFGPVQSI 452
+M ++E+FGPV +I
Sbjct: 357 PEMTAFREELFGPVAAI 373
|
Length = 462 |
| >gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Score = 151 bits (385), Expect = 3e-41
Identities = 122/361 (33%), Positives = 171/361 (47%), Gaps = 39/361 (10%)
Query: 108 AVSAARKAFDEGPWPRMTAYE-RSKIILRFADLLERHNDEI-AALETWDNGKPFEQSAQT 165
AV AR+AF G + E R + + +LE + DEI AL D KP ++ +
Sbjct: 3 AVRRAREAFSSG---KTRPLEFRIQQLEALLRMLEENEDEIVEALAK-DLRKPKFEAVLS 58
Query: 166 EVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTL-------HEPIGVAGQIIPWNFPL- 217
E+ + +Y + P ++ TL EP+GV I WN+PL
Sbjct: 59 EILLVKNEIKYAI---SNLPEWMKPEPVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQ 115
Query: 218 LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLN-----IVSGYGPT 272
L VG A+A GN +V+K +E +P +A KLL E L P L+ +V G G
Sbjct: 116 LTLVPLVG-AIAAGNCVVIKPSEVSPATA----KLLAE--LIPKYLDKECYPVVLG-GVE 167
Query: 273 AGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAA 332
L D + +TGST+ GKIV+Q AAK +L PVTLELGGKSP V + D+D AA
Sbjct: 168 ETTELLKQ-RFDYIFYTGSTSVGKIVMQAAAK-HLTPVTLELGGKSPCYVDKSCDIDVAA 225
Query: 333 ELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDS 392
+ F N GQ C A V ++FVE +K G+ K G I+
Sbjct: 226 RRIAWGKFINAGQTCIAPDYVLCTPEVQEKFVEALKK-TLKEFYGEDPKESPDYGRIIND 284
Query: 393 EQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSI 452
F+++ K + G K+ GG+ K YI PTV T VK + ++EIFGP+ I
Sbjct: 285 RHFQRLKKLLSGG-----KVAIGGQ-TDEKERYIAPTVLTDVKPSDPVMQEEIFGPILPI 338
Query: 453 L 453
+
Sbjct: 339 V 339
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443 |
| >gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 147 bits (374), Expect = 4e-38
Identities = 124/394 (31%), Positives = 177/394 (44%), Gaps = 58/394 (14%)
Query: 87 DPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP-WPRMTAYERSKIILRFADLLERHND 145
DPR D++ +V E +V +A+ +A A P W ER+ I+ R ADL+E
Sbjct: 668 DPR--DIVGYVREATPAEVEQALESAVNA---APIWFATPPAERAAILERAADLMEAQMQ 722
Query: 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA-DKIQGLTAPADGPYHVQTLHEPI 204
+ L + GK F +A EV RYYAG D T H P+
Sbjct: 723 TLMGLLVREAGKTF-SNAIAEVREAVDFLRYYAGQVRDDFDNDT------------HRPL 769
Query: 205 GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLN 264
G I PWNFPL +F +V ALA GN+++ K AEQTPL A ++L EAG+P GV+
Sbjct: 770 GPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQ 829
Query: 265 IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ------LAAKSNLKPVTLELGGKS 318
++ G G T GAAL + V + FTGST ++ LQ L + P+ E GG++
Sbjct: 830 LLPGRGETVGAALVADARVRGVMFTGSTEVARL-LQRNLAGRLDPQGRPIPLIAETGGQN 888
Query: 319 PFIVCEDA-------DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALA 371
IV A DV +A F + GQ C A + + V D+ L
Sbjct: 889 AMIVDSSALTEQVVADVLASA-------FDSAGQRCSALRVLCLQDDVADR------TLK 935
Query: 372 MKR------VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK---LETGGERLGAK 422
M R +G+P + GP ID+E I ++I++ G
Sbjct: 936 MLRGAMAECRMGNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQS 995
Query: 423 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
G ++ PT+ D L K E+FGPV +++Y
Sbjct: 996 GTFVPPTLIELDSFDEL--KREVFGPVLHVVRYN 1027
|
Length = 1318 |
| >gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Score = 129 bits (327), Expect = 3e-33
Identities = 113/368 (30%), Positives = 164/368 (44%), Gaps = 36/368 (9%)
Query: 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILR-FADLLERHNDEI-AALETWDNGKPFEQS 162
R V R+ F G R + E K L+ L++ + D+I AAL D GKP +S
Sbjct: 1 APRLVRELRETFRSG---RTRSAEWRKSQLKGLLRLVDENEDDIFAALRQ-DLGKPSAES 56
Query: 163 AQTEVPMTTR--------LFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWN 214
+ EV + L ++ A K T PA + + EP+GV I WN
Sbjct: 57 FRDEVSVLVSSCKLAIKELKKWMAPEKVKTPLTTFPAKA----EIVSEPLGVVLVISAWN 112
Query: 215 FPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAG 274
FP L+ V A+A GN +VLK +E P ++ ++KL+ L + ++ G G
Sbjct: 113 FPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLI-PEYLDTKAIKVIEG-GVPET 170
Query: 275 AALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAE- 333
AL + DK+ FTGS G+I++ AAK +L PVTLELGGK P IV D+ A
Sbjct: 171 TALLEQ-KWDKIFFTGSPRVGRIIMAAAAK-HLTPVTLELGGKCPVIVDSTVDLKVAVRR 228
Query: 334 --LAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF-KGGIQQG--P 388
+ N GQ C A V ES ++ A+K + F + +
Sbjct: 229 IAGGKWGC--NNGQACIAPDYVLVEESFAPTLID-----ALKNTLEKFFGENPKESKDLS 281
Query: 389 QIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGP 448
+I + + L + K+ GGER K YI+PT+ D I +EIFGP
Sbjct: 282 RIVNSHHFQRLSRLLDDPSVADKIVHGGER-DEKNLYIEPTILLDPPLDSSIMTEEIFGP 340
Query: 449 VQSILKYK 456
+ I+ K
Sbjct: 341 LLPIITVK 348
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432 |
| >gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Score = 124 bits (313), Expect = 3e-31
Identities = 90/367 (24%), Positives = 149/367 (40%), Gaps = 29/367 (7%)
Query: 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164
RA+ AA R+ +R+ + R L + +IAA GK + +
Sbjct: 1 PERALLAADI--STKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGWMFAEN 58
Query: 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHE---PIGVAGQIIPWNFPLLMFA 221
R + ++ +I G Q H P G I +NFPL +
Sbjct: 59 ICGDQVQLRARAFVIYSYRIPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPL 118
Query: 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASH 280
++ ALA GN +++K + + +LLH AG LPP + +++G G T AL H
Sbjct: 119 LQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPEDVTLINGDGKT-MQALLLH 177
Query: 281 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDAD-VDKAAELAHYAL 339
+ FTGS+ + +LA + + LEL G + ++ DA VD A +
Sbjct: 178 PNPKMVLFTGSSRVAE---KLALDAKQARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDM 234
Query: 340 FFNQGQCCCAGSRTFVHESVYDQ-FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 398
GQ C A S FV E+ VEK AL +R + D G +Q + +
Sbjct: 235 TACSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLEDLLLGPVQ------TFTTLAM 288
Query: 399 LKYIRSGVDGGAKLETGGERLGAK------GYYIKPTVFTGVKDDMLIAK---DEIFGPV 449
+ ++ + G+ L G+ L G + +F + + + + +EIFGP
Sbjct: 289 IAHMEN--LLGSVLLFSGKELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPF 346
Query: 450 QSILKYK 456
+++YK
Sbjct: 347 AIVVEYK 353
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442 |
| >gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 1e-25
Identities = 103/358 (28%), Positives = 166/358 (46%), Gaps = 16/358 (4%)
Query: 102 AEDVNRAVSAARKAFDEGPWPRMTAYE-RSKIILRFADLLERHNDEIAALETWDNGKPFE 160
A D + V+ R++FD+G YE R + + + + H EI A D GKP
Sbjct: 9 AADASILVTELRRSFDDGV---TRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPEL 65
Query: 161 QSAQTEVPM---TTRL-FRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFP 216
+S+ EV + + +L + W + T+ P + + EP+GV I WN+P
Sbjct: 66 ESSVYEVSLLRNSIKLALKQLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYP 125
Query: 217 LLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAA 276
L+ V A++ GN +VLK +E P S+ ++KLL E L + +V G A
Sbjct: 126 FLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLL-EQYLDSSAVRVVEGAVTETTAL 184
Query: 277 LASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAH 336
L + DK+ +TGS+ G++++ AAK +L PV LELGGKSP +V D D+
Sbjct: 185 L--EQKWDKIFYTGSSKIGRVIMAAAAK-HLTPVVLELGGKSPVVVDSDTDLKVTVRRII 241
Query: 337 YALF-FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQF 395
+ N GQ C + + + ++ A ++ G ++S F
Sbjct: 242 AGKWGCNNGQACISPDYILTTKEYAPKVID-AMKKELETFYGKNPMESKDMSRIVNSTHF 300
Query: 396 EKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSIL 453
+++ K + + K+ GGE+ + I PT+ V D LI +EIFGP+ IL
Sbjct: 301 DRLSKLLDEK-EVSDKIVYGGEK-DRENLKIAPTILLDVPLDSLIMSEEIFGPLLPIL 356
|
Length = 484 |
| >gnl|CDD|237016 PRK11903, PRK11903, aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 99.0 bits (247), Expect = 3e-22
Identities = 104/424 (24%), Positives = 168/424 (39%), Gaps = 57/424 (13%)
Query: 70 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY-E 128
+ G++ SG P DP TG+ + V D+ A + AR+ G R Y +
Sbjct: 9 VAGRWQA-GSGAGTPLFDPVTGEELVRV-SATGLDLAAAFAFARE--QGGAALRALTYAQ 64
Query: 129 RSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT 188
R+ ++ +L+ + D + T N + ++ YYA +
Sbjct: 65 RAALLAAIVKVLQANRDAYYDIAT-ANSGTTRNDSAVDIDGGIFTLGYYAKLGAALGDAR 123
Query: 189 APADGP---------YHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 238
DG + Q + P GVA I +NFP K PAL G +++K
Sbjct: 124 LLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFPAWGLWEKAAPALLAGVPVIVKP 183
Query: 239 AEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHM-EVDKLAFTGSTTTGK 296
A T + K + AG LP G L++V G + A L H+ D ++FTGS T
Sbjct: 184 ATATAWLTQRMVKDVVAAGILPAGALSVVCG----SSAGLLDHLQPFDVVSFTGSAETAA 239
Query: 297 I------VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ------- 343
+ V+Q + + N++ +L ++ DA A + LF +
Sbjct: 240 VLRSHPAVVQRSVRVNVEADSLNSA-----LLGPDAAPGSEA----FDLFVKEVVREMTV 290
Query: 344 --GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 401
GQ C A R FV E++YD E A K VG+P G++ GP + Q +
Sbjct: 291 KSGQKCTAIRRIFVPEALYDAVAEALAARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAG 350
Query: 402 IRSGVDGGAKLETGGERLG------AKGYYIKPTVFTGVKDDM---LIAKDEIFGPVQSI 452
+ + + A++ G A + PT+ G D + E+FGPV ++
Sbjct: 351 L-AALRAQAEVLFDGGGFALVDADPAVAACVGPTLL-GASDPDAATAVHDVEVFGPVATL 408
Query: 453 LKYK 456
L Y+
Sbjct: 409 LPYR 412
|
Length = 521 |
| >gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 95.2 bits (237), Expect = 4e-21
Identities = 96/380 (25%), Positives = 162/380 (42%), Gaps = 43/380 (11%)
Query: 98 AEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKI--ILRFADLLERHNDEIAALETWDN 155
E E + +V+ R+ ++ G R + +S++ +LR L + AL D
Sbjct: 1 EEAPGETLEGSVAELRETYESGR-TRSLEWRKSQLKGLLRL--LKDNEEAIFKALHQ-DL 56
Query: 156 GKPFEQSAQTEVPMTTRLFRY----YAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQII 211
GK ++ + EV + T+ W + P + + EP+GV
Sbjct: 57 GKHRVEAYRDEVGVLTKSANLALSNLKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFS 116
Query: 212 PWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGP 271
WNFP+ + + A+A GN +VLK +E P ++ +++ + L + ++ G GP
Sbjct: 117 SWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANI-PKYLDSKAVKVIEG-GP 174
Query: 272 TAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV-CEDADVDK 330
G L H + DK+ FTGS G+I++ AAK +L PV LELGGK P IV + D
Sbjct: 175 AVGEQLLQH-KWDKIFFTGSPRVGRIIMTAAAK-HLTPVALELGGKCPCIVDSLSSSRDT 232
Query: 331 --------AAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 382
+ A GQ C A V E +E + +K+ G+ +
Sbjct: 233 KVAVNRIVGGKWGSCA-----GQACIAIDYVLVEERFAPILIELLKST-IKKFFGENPRE 286
Query: 383 GIQQGPQIDSEQFEKILKYIR------SGVDGGAKLETGGERLGAKGYYIKPTVFTGVKD 436
++ + F+++ ++ S V GG+ + K +I+PT+
Sbjct: 287 SKSMARILNKKHFQRLSNLLKDPRVAASIVHGGS--------IDEKKLFIEPTILLNPPL 338
Query: 437 DMLIAKDEIFGPVQSILKYK 456
D I +EIFGP+ I+ K
Sbjct: 339 DSDIMTEEIFGPLLPIITVK 358
|
Length = 484 |
| >gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Score = 90.4 bits (225), Expect = 2e-19
Identities = 115/434 (26%), Positives = 168/434 (38%), Gaps = 76/434 (17%)
Query: 70 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPR-MTAYE 128
+ GQ+ +G D TG+V+ V+ E D AV+ AR+ GP R +T +E
Sbjct: 5 VAGQWHAG-TGDGRTLHDAVTGEVVARVS-SEGLDFAAAVAYARE--KGGPALRALTFHE 60
Query: 129 RSKIILRFADLLERHNDEIAALETW------DNGKPFEQSAQTEVPMTTRLFRYYAGWAD 182
R+ ++ A L +++ AL D+ + T LF YA
Sbjct: 61 RAAMLKALAKYLMERKEDLYALSAATGATRRDSWIDIDGGIGT-------LF-AYASLGR 112
Query: 183 KIQGLTAPADGPYHVQTLHEPI----------------GVAGQIIPWNFPLLMFAWKVGP 226
+ + + V+ EP+ GVA I +NFP+ K P
Sbjct: 113 RE-----LPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFNFPVWGMLEKFAP 167
Query: 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHMEVDK 285
AL G +++K A T V K + E+G LP G L ++ G + G L E D
Sbjct: 168 ALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICG---SVGDLLDHLGEQDV 224
Query: 286 LAFTGSTTTGKIVLQLAAKSNLK----PVTLELGGKSPFIVCEDADVDKAAELAHYALFF 341
+AFTGS T +L A N+ E + I+ DA + LF
Sbjct: 225 VAFTGSAATAA---KLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPE----FDLFV 277
Query: 342 NQ---------GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDS 392
+ GQ C A R FV E+ D +E A K VVGDP G++ GP +
Sbjct: 278 KEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEALKARLAKVVVGDPRLEGVRMGPLVSR 337
Query: 393 EQFEKILKYI---RSG---VDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKD--- 443
EQ E + + + V GG KG + PT+ DD A
Sbjct: 338 EQREDVRAAVATLLAEAEVVFGGPDRFEVVGADAEKGAFFPPTLLLC--DDPDAATAVHD 395
Query: 444 -EIFGPVQSILKYK 456
E FGPV +++ Y
Sbjct: 396 VEAFGPVATLMPYD 409
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. Length = 513 |
| >gnl|CDD|143444 cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Score = 81.4 bits (201), Expect = 2e-16
Identities = 111/415 (26%), Positives = 177/415 (42%), Gaps = 45/415 (10%)
Query: 69 LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYE 128
L+ G++ +++ T LDP GD V + + +++N V + R+ G + E
Sbjct: 2 LVAGKWKGASNYTTL--LDPLNGDKFISVPDTDEDEINEFVDSLRQCPKSGLHNPLKNPE 59
Query: 129 R----SKIILRFADLLERHNDE--IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWAD 182
R + R A L + E A L K Q A EV +T + +AG D
Sbjct: 60 RYLLYGDVSHRVAHELRKPEVEDFFARLIQRVAPKSDAQ-ALGEVVVTRKFLENFAG--D 116
Query: 183 KIQ----GLTAPADGPYHVQTLHE---PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIV 235
+++ P D + Q P G I P+NFPL + A ++ AL GN +
Sbjct: 117 QVRFLARSFNVPGD--HQGQQSSGYRWPYGPVAIITPFNFPLEIPALQLMGALFMGNKPL 174
Query: 236 LKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG 295
LK + + +LLH G+P ++++ GPT L FTGS+
Sbjct: 175 LKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPTMNKIL-LEANPRMTLFTGSS--- 230
Query: 296 KIVLQLAAKSNLKPVTLELGGKSPFIVCED-ADVDKAAELAHYALFFNQGQCCCAGSRTF 354
K+ +LA + + K V LE G I+ D +DVD A + GQ C A S F
Sbjct: 231 KVAERLALELHGK-VKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILF 289
Query: 355 VHESVYDQ-FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD-GGAKL 412
HE+ ++K ALA +R + D + GP + + E+IL ++ + GAK+
Sbjct: 290 AHENWVQAGILDKLKALAEQRKLED-----LTIGP-VLTWTTERILDHVDKLLAIPGAKV 343
Query: 413 ETGGERLGAK------GYYIKPTVFTGVKDDML-----IAKDEIFGPVQSILKYK 456
GG+ L G Y VF +++ + + E+FGP Q + +YK
Sbjct: 344 LFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTEVFGPFQVVTEYK 398
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. Length = 489 |
| >gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 78.3 bits (193), Expect = 2e-15
Identities = 111/412 (26%), Positives = 172/412 (41%), Gaps = 36/412 (8%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPR-MT 125
Q ++G++ + G+ P D TG+V+ V E DV AV+ AR+ GP R +T
Sbjct: 2 QSYLSGEWR-TGQGEGVPVRDASTGEVLARVT-SEGLDVAAAVAWAREV--GGPALRALT 57
Query: 126 AYERSKIILRFADLLERHNDEIAALETW------DNGKPFEQSAQTEVPMTTRLFRYYAG 179
+ER++++ A L + + AL DN + T ++ R
Sbjct: 58 FHERARMLKALAQYLSERKEALYALAATTGATRRDNWVDIDGGIGTLFTYSSLGRRELPD 117
Query: 180 WADKIQGLTAP--ADGPYHVQTLHEPI-GVAGQIIPWNFPLLMFAWKVGPALACGNTIVL 236
+ P DG + + + P GVA QI +NFP+ K PA G +
Sbjct: 118 ANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFNFPVWGLLEKFAPAFLAGVPTLA 177
Query: 237 KTAEQTPLSALYVSKLLHEAGL-PPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG 295
K A T A + + + E+GL P G L ++ G +AG L D +AFTGS T
Sbjct: 178 KPATPTAYVAEALVRTMVESGLLPEGSLQLICG---SAGDLLDHLDHRDVVAFTGSAATA 234
Query: 296 KIVLQLAAKSNLK----PVTLELGGKSPFIVCEDADVDKAAELAHYA------LFFNQGQ 345
+L A N+ E + I+ EDA D+ E +A L GQ
Sbjct: 235 D---RLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEP-EFDLFAQEIVRELTIKAGQ 290
Query: 346 CCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 405
C A R V +++ + ++ A K V+GDP + G+ GP + EQ + + +
Sbjct: 291 KCTAIRRVIVPKALLEAVLKALQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAAL 350
Query: 406 VDGGAKLETGG-ERLGAKGYYIKPTVFTGVKDDMLIAKD-EIFGPVQSILKY 455
+ GA++ GG RL G + PT+ E FGPV + Y
Sbjct: 351 LAAGAEVRLGGPGRL--DGAFFPPTLLLAEDPWAGAVHATEAFGPVATFFPY 400
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663 |
| >gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Score = 74.1 bits (183), Expect = 3e-14
Identities = 94/378 (24%), Positives = 135/378 (35%), Gaps = 56/378 (14%)
Query: 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI---AALETWDNGKPFEQ 161
V+ A +AA AF+ + ++ R+ + AD +E DE+ A ET G P E
Sbjct: 1 VDAAAAAAAAAFES--YRALSPARRAAFLEAIADEIEALGDELVARAHAET---GLP-EA 54
Query: 162 SAQTEVPMTTRLFRYYA------GWADKIQGLTAPADGPY---HVQTLHEPIGVAGQIIP 212
Q E+ TT R +A W D P P ++ + P+G
Sbjct: 55 RLQGELGRTTGQLRLFADLVREGSWLDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGA 114
Query: 213 WNFPLLMFAWKVG-----PALACGNTIVLK-------TAEQTPLSALYVSKLLHEAGLPP 260
NFP A+ V ALA G +V+K T+E L A + L GLP
Sbjct: 115 SNFP---LAFSVAGGDTASALAAGCPVVVKAHPAHPGTSE---LVARAIRAALRATGLPA 168
Query: 261 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL-KPVTLELGGKSP 319
GV +++ G G G AL H + + FTGS G+ + AA P ELG +P
Sbjct: 169 GVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNP 228
Query: 320 FIVCEDADVDKAAELA---HYALFFNQGQCCCAGSRTFVHESV-YDQFVEKANALAMKRV 375
+ A ++ +A +L GQ C V D F+
Sbjct: 229 VFILPGALAERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAP 288
Query: 376 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVK 435
GI + + E + G L G G PT+F V
Sbjct: 289 AQTMLTPGIAEAYRQGVEA--------LAAAPGVRVLAGGAAAEGGNQA--APTLFK-VD 337
Query: 436 DDMLIAKD----EIFGPV 449
+A E+FGP
Sbjct: 338 AAAFLADPALQEEVFGPA 355
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454 |
| >gnl|CDD|143396 cd07077, ALDH-like, NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Score = 70.7 bits (173), Expect = 3e-13
Identities = 61/257 (23%), Positives = 93/257 (36%), Gaps = 24/257 (9%)
Query: 125 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRL----------F 174
+R II A+ L +A+ + G + M
Sbjct: 14 HDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTE 73
Query: 175 RYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTI 234
R IQ + P +G +V+ PIGV I+P PL +A N
Sbjct: 74 RGITASVGHIQDVLLPDNGETYVRA--FPIGVTMHILPSTNPLSGIT-SALRGIATRNQC 130
Query: 235 VLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA----SHMEVDKLAFTG 290
+ + P + LL +A I+ Y P LA SH ++D + TG
Sbjct: 131 IFRPHPSAPFTN-RALALLFQAADAAHGPKILVLYVPHPSDELAEELLSHPKIDLIVATG 189
Query: 291 STTTGKIVLQLAAK-SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCA 349
G+ + A K S PV G SP +V E AD ++A+ H + FF+Q C +
Sbjct: 190 ----GRDAVDAAVKHSPHIPVIGFGAGNSPVVVDETADEERASGSVHDSKFFDQ-NACAS 244
Query: 350 GSRTFVHESVYDQFVEK 366
+V + V D E+
Sbjct: 245 EQNLYVVDDVLDPLYEE 261
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 397 |
| >gnl|CDD|236931 PRK11563, PRK11563, bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 66.0 bits (162), Expect = 2e-11
Identities = 82/281 (29%), Positives = 119/281 (42%), Gaps = 46/281 (16%)
Query: 205 GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVL 263
GVA I +NFP+ K+ PA G ++K A T V +L+ E+G LP G L
Sbjct: 150 GVAVHINAFNFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGAL 209
Query: 264 NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 323
++ G +AG L D + FTGS T + +L A N+ + PF
Sbjct: 210 QLICG---SAGDLLDHLDGQDVVTFTGSAATAQ---KLRAHPNV------VANSVPFTA- 256
Query: 324 EDAD--------VDKAAELAHYALFFNQ---------GQCCCAGSRTFVHESVYDQFVEK 366
+AD D + LF + GQ C A R V ++ D +E
Sbjct: 257 -EADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAVIEA 315
Query: 367 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG----ERLGA- 421
A K VVGDP G++ G EQ E + + + + + A++ GG E +GA
Sbjct: 316 LRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLA-AAEIVFGGPDSFEVVGAD 374
Query: 422 --KGYYIKPTVFTGVKDDMLIAKD----EIFGPVQSILKYK 456
KG + PT+ DD L A E FGPV +++ Y
Sbjct: 375 AEKGAFFPPTLLYC--DDPLEAPAVHDVEAFGPVSTLMPYD 413
|
Length = 675 |
| >gnl|CDD|143439 cd07121, ALDH_EutE, Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Score = 48.0 bits (115), Expect = 5e-06
Identities = 76/320 (23%), Positives = 119/320 (37%), Gaps = 67/320 (20%)
Query: 103 EDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162
V+ AV+AA+ A + + + T +R KII + L + +E+A + E+
Sbjct: 4 ATVDDAVAAAKAAQKQ--YRKCTLADREKIIEAIREALLSNAEELAEMA-------VEE- 53
Query: 163 AQTEVPMTTRLFRYYAGWADKIQGLTAPAD---GPYHVQ----------TLHE--PIGVA 207
T + R DKI A+ G + TL E P GV
Sbjct: 54 --------TGMGRV----EDKIAKNHLAAEKTPGTEDLTTTAWSGDNGLTLVEYAPFGVI 101
Query: 208 GQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVL 263
G I P P LA GN +V + Y +L+++A G P ++
Sbjct: 102 GAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAEAGGPDNLV 161
Query: 264 NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG---GKSPF 320
V L +H +++ L TG G V++ A S K + G G P
Sbjct: 162 VTVEEPTIETTNELMAHPDINLLVVTG----GPAVVKAALSSGKKAI----GAGAGNPPV 213
Query: 321 IVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380
+V E AD++KAA F+ C A +SV D + AM+R
Sbjct: 214 VVDETADIEKAARDIVQGASFDNNLPCIAEKEVIAVDSVADYLIA-----AMQR------ 262
Query: 381 KGGIQQGPQIDSEQFEKILK 400
++ EQ E++L+
Sbjct: 263 ----NGAYVLNDEQAEQLLE 278
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. Length = 429 |
| >gnl|CDD|143400 cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Score = 46.9 bits (111), Expect = 1e-05
Identities = 42/179 (23%), Positives = 69/179 (38%), Gaps = 9/179 (5%)
Query: 192 DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVL----KTAEQTPLSAL 247
D + EPIGV I P P +K +L N+I+ + + T +A
Sbjct: 84 DENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAAT 143
Query: 248 YVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 307
+ + AG P ++ + L + L TG K AA S+
Sbjct: 144 LLLQAAVAAGAPENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPAVVK-----AAYSSG 198
Query: 308 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 366
KP G +P ++ E AD+ +A + + F+ G C + V +SVYD+ +
Sbjct: 199 KPAIGVGAGNTPVVIDETADIKRAVQSIVKSKTFDNGVICASEQSVIVVDSVYDEVMRL 257
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. Length = 439 |
| >gnl|CDD|143440 cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Score = 42.5 bits (101), Expect = 3e-04
Identities = 44/180 (24%), Positives = 72/180 (40%), Gaps = 20/180 (11%)
Query: 202 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVL----KTAEQTPLSALYVSKLLHEAG 257
EP+GV +IP P +K AL N I+ + + + +A + + AG
Sbjct: 94 EPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAG 153
Query: 258 LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG-- 315
P G++ + L H +VD + TG K AA S+ KP +G
Sbjct: 154 APEGLIQWIEEPSIELTQELMKHPDVDLILATGGPGMVK-----AAYSSGKPA---IGVG 205
Query: 316 -GKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 374
G P + E AD+ +A + + F+ G C + V + +YD+ +KR
Sbjct: 206 PGNVPAYIDETADIKRAVKDIILSKTFDNGTICASEQSVIVDDEIYDEVRA-----ELKR 260
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. Length = 436 |
| >gnl|CDD|237956 PRK15398, PRK15398, aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 4e-04
Identities = 79/320 (24%), Positives = 118/320 (36%), Gaps = 67/320 (20%)
Query: 103 EDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162
V+ AV+AA+ A + + + R +II + L H +E+A L E+
Sbjct: 36 ASVDDAVAAAKVAQQR--YQQKSLAMRQRIIDAIREALLPHAEELAELA-------VEE- 85
Query: 163 AQTEVPMTTRLFRYYAGWADKIQGLTAPAD---GPYHVQ----------TLHE--PIGVA 207
T + R DKI A A+ G + TL E P GV
Sbjct: 86 --------TGMGRV----EDKIAKNVAAAEKTPGVEDLTTEALTGDNGLTLIEYAPFGVI 133
Query: 208 GQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVL 263
G + P P LA GN++V +L +LL+EA G P ++
Sbjct: 134 GAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNEAIVAAGGPENLV 193
Query: 264 NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG---GKSPF 320
V+ L H + L TG G V++ A KS K + G G P
Sbjct: 194 VTVAEPTIETAQRLMKHPGIALLVVTG----GPAVVKAAMKSGKKAI----GAGAGNPPV 245
Query: 321 IVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380
+V E AD++KAA F+ C A V +SV D+ + M++
Sbjct: 246 VVDETADIEKAARDIVKGASFDNNLPCIAEKEVIVVDSVADELMR-----LMEK------ 294
Query: 381 KGGIQQGPQIDSEQFEKILK 400
+ +EQ EK+ K
Sbjct: 295 ----NGAVLLTAEQAEKLQK 310
|
Length = 465 |
| >gnl|CDD|131341 TIGR02288, PaaN_2, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 39.5 bits (92), Expect = 0.004
Identities = 54/193 (27%), Positives = 81/193 (41%), Gaps = 30/193 (15%)
Query: 213 WNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS-ALYVS---KLLHEAGLPPGVLNIVSG 268
WN +FA +LA GN +++K L AL V ++L EAG P ++ + +
Sbjct: 208 WNTYPGLFA-----SLATGNPVLVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAA- 261
Query: 269 YGPTAGAA--LASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDA 326
+ P AA LA+ V + FTGS G+ + Q A ++ V E G + I+
Sbjct: 262 FDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNARQAQ---VYTEKAGVNTVIIESTD 318
Query: 327 DVDKAAELAHYALFFNQGQCCCA---------GSRTFVHESVYDQFVEKANALAMKRVVG 377
D ++L GQ C G RT YD+ V A A+ ++G
Sbjct: 319 DYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSYDE-VAADLATAIDGLLG 377
Query: 378 DPFK-----GGIQ 385
DP + G IQ
Sbjct: 378 DPARATAVLGAIQ 390
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has a domain which is a member of the pfam00171 family. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. Length = 551 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 456 | |||
| PLN02466 | 538 | aldehyde dehydrogenase family 2 member | 100.0 | |
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| KOG2451 | 503 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| COG1012 | 472 | PutA NAD-dependent aldehyde dehydrogenases [Energy | 100.0 | |
| PRK11241 | 482 | gabD succinate-semialdehyde dehydrogenase I; Provi | 100.0 | |
| PLN02766 | 501 | coniferyl-aldehyde dehydrogenase | 100.0 | |
| PLN02419 | 604 | methylmalonate-semialdehyde dehydrogenase [acylati | 100.0 | |
| cd07140 | 486 | ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge | 100.0 | |
| cd07142 | 476 | ALDH_F2BC Arabidosis aldehyde dehydrogenase family | 100.0 | |
| TIGR03374 | 472 | ABALDH 1-pyrroline dehydrogenase. Members of this | 100.0 | |
| cd07113 | 477 | ALDH_PADH_NahF Escherichia coli NAD+-dependent phe | 100.0 | |
| PLN02278 | 498 | succinic semialdehyde dehydrogenase | 100.0 | |
| cd07141 | 481 | ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro | 100.0 | |
| PRK13252 | 488 | betaine aldehyde dehydrogenase; Provisional | 100.0 | |
| PLN02315 | 508 | aldehyde dehydrogenase family 7 member | 100.0 | |
| PLN02467 | 503 | betaine aldehyde dehydrogenase | 100.0 | |
| cd07117 | 475 | ALDH_StaphAldA1 Uncharacterized Staphylococcus aur | 100.0 | |
| cd07559 | 480 | ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep | 100.0 | |
| cd07143 | 481 | ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh | 100.0 | |
| TIGR03216 | 481 | OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy | 100.0 | |
| cd07123 | 522 | ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate | 100.0 | |
| TIGR01236 | 533 | D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07091 | 476 | ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families | 100.0 | |
| TIGR02299 | 488 | HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd | 100.0 | |
| cd07085 | 478 | ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog | 100.0 | |
| cd07097 | 473 | ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent | 100.0 | |
| cd07119 | 482 | ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be | 100.0 | |
| cd07144 | 484 | ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd | 100.0 | |
| PRK09457 | 487 | astD succinylglutamic semialdehyde dehydrogenase; | 100.0 | |
| PRK09847 | 494 | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen | 100.0 | |
| PRK13473 | 475 | gamma-aminobutyraldehyde dehydrogenase; Provisiona | 100.0 | |
| cd07116 | 479 | ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen | 100.0 | |
| TIGR01804 | 467 | BADH glycine betaine aldehyde dehydrogenase. Betai | 100.0 | |
| cd07086 | 478 | ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip | 100.0 | |
| cd07124 | 512 | ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl | 100.0 | |
| cd07130 | 474 | ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se | 100.0 | |
| cd07138 | 466 | ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac | 100.0 | |
| cd07088 | 468 | ALDH_LactADH-AldA Escherichia coli lactaldehyde de | 100.0 | |
| PRK13968 | 462 | putative succinate semialdehyde dehydrogenase; Pro | 100.0 | |
| cd07139 | 471 | ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy | 100.0 | |
| TIGR01237 | 511 | D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| PRK09406 | 457 | gabD1 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| cd07131 | 478 | ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen | 100.0 | |
| TIGR01780 | 448 | SSADH succinate-semialdehyde dehydrogenase. SSADH | 100.0 | |
| cd07083 | 500 | ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)- | 100.0 | |
| cd07128 | 513 | ALDH_MaoC-N N-terminal domain of the monoamine oxi | 100.0 | |
| cd07111 | 480 | ALDH_F16 Aldehyde dehydrogenase family 16A1-like. | 100.0 | |
| TIGR03240 | 484 | arg_catab_astD succinylglutamic semialdehyde dehyd | 100.0 | |
| PRK03137 | 514 | 1-pyrroline-5-carboxylate dehydrogenase; Provision | 100.0 | |
| TIGR01722 | 477 | MMSDH methylmalonic acid semialdehyde dehydrogenas | 100.0 | |
| cd07151 | 465 | ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd | 100.0 | |
| TIGR03250 | 472 | PhnAcAld_DH putative phosphonoacetaldehyde dehydro | 100.0 | |
| cd07120 | 455 | ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh | 100.0 | |
| TIGR02278 | 663 | PaaN-DH phenylacetic acid degradation protein paaN | 100.0 | |
| cd07112 | 462 | ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent | 100.0 | |
| cd07145 | 456 | ALDH_LactADH_F420-Bios Methanocaldococcus jannasch | 100.0 | |
| cd07118 | 454 | ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr | 100.0 | |
| PF00171 | 462 | Aldedh: Aldehyde dehydrogenase family; InterPro: I | 100.0 | |
| PLN00412 | 496 | NADP-dependent glyceraldehyde-3-phosphate dehydrog | 100.0 | |
| PRK11903 | 521 | aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07107 | 456 | ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde | 100.0 | |
| cd07115 | 453 | ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy | 100.0 | |
| cd07110 | 456 | ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro | 100.0 | |
| TIGR01238 | 500 | D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07089 | 459 | ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric | 100.0 | |
| cd07125 | 518 | ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d | 100.0 | |
| cd07148 | 455 | ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si | 100.0 | |
| cd07109 | 454 | ALDH_AAS00426 Uncharacterized Saccharopolyspora sp | 100.0 | |
| cd07090 | 457 | ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty | 100.0 | |
| cd07150 | 451 | ALDH_VaniDH_like Pseudomonas putida vanillin dehyd | 100.0 | |
| PRK09407 | 524 | gabD2 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| PRK11563 | 675 | bifunctional aldehyde dehydrogenase/enoyl-CoA hydr | 100.0 | |
| cd07082 | 473 | ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat | 100.0 | |
| cd07101 | 454 | ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi | 100.0 | |
| cd07114 | 457 | ALDH_DhaS Uncharacterized Candidatus pelagibacter | 100.0 | |
| PLN02174 | 484 | aldehyde dehydrogenase family 3 member H1 | 100.0 | |
| cd07106 | 446 | ALDH_AldA-AAD23400 Streptomyces aureofaciens putat | 100.0 | |
| cd07126 | 489 | ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de | 100.0 | |
| cd07108 | 457 | ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a | 100.0 | |
| cd07099 | 453 | ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di | 100.0 | |
| cd07094 | 453 | ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende | 100.0 | |
| cd07102 | 452 | ALDH_EDX86601 Uncharacterized aldehyde dehydrogena | 100.0 | |
| cd07092 | 450 | ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g | 100.0 | |
| cd07103 | 451 | ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald | 100.0 | |
| cd07147 | 452 | ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1 | 100.0 | |
| cd07098 | 465 | ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and | 100.0 | |
| cd07152 | 443 | ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen | 100.0 | |
| cd07093 | 455 | ALDH_F8_HMSADH Human aldehyde dehydrogenase family | 100.0 | |
| cd07146 | 451 | ALDH_PhpJ Streptomyces putative phosphonoformaldeh | 100.0 | |
| PRK11904 | 1038 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 100.0 | |
| cd07100 | 429 | ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi | 100.0 | |
| cd07095 | 431 | ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde | 100.0 | |
| cd07149 | 453 | ALDH_y4uC Uncharacterized ALDH (y4uC) with similar | 100.0 | |
| PLN02203 | 484 | aldehyde dehydrogenase | 100.0 | |
| cd07135 | 436 | ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde | 100.0 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| TIGR02288 | 551 | PaaN_2 phenylacetic acid degradation protein paaN. | 100.0 | |
| cd07104 | 431 | ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen | 100.0 | |
| cd07105 | 432 | ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l | 100.0 | |
| PRK10090 | 409 | aldehyde dehydrogenase A; Provisional | 100.0 | |
| PTZ00381 | 493 | aldehyde dehydrogenase family protein; Provisional | 100.0 | |
| cd07137 | 432 | ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m | 100.0 | |
| cd07136 | 449 | ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr | 100.0 | |
| cd07127 | 549 | ALDH_PAD-PaaZ Phenylacetic acid degradation protei | 100.0 | |
| cd07133 | 434 | ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l | 100.0 | |
| cd07134 | 433 | ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro | 100.0 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 100.0 | |
| cd07132 | 443 | ALDH_F3AB Aldehyde dehydrogenase family 3 members | 100.0 | |
| cd07087 | 426 | ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl | 100.0 | |
| KOG2452 | 881 | consensus Formyltetrahydrofolate dehydrogenase [Nu | 100.0 | |
| cd07081 | 439 | ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh | 100.0 | |
| cd07129 | 454 | ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr | 100.0 | |
| cd07084 | 442 | ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent | 100.0 | |
| cd07078 | 432 | ALDH NAD(P)+ dependent aldehyde dehydrogenase fami | 100.0 | |
| KOG2454 | 583 | consensus Betaine aldehyde dehydrogenase [Energy p | 100.0 | |
| cd07121 | 429 | ALDH_EutE Ethanolamine utilization protein EutE-li | 100.0 | |
| PRK15398 | 465 | aldehyde dehydrogenase EutE; Provisional | 100.0 | |
| KOG2456 | 477 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| cd07122 | 436 | ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr | 100.0 | |
| TIGR02518 | 488 | EutH_ACDH acetaldehyde dehydrogenase (acetylating) | 100.0 | |
| KOG2455 | 561 | consensus Delta-1-pyrroline-5-carboxylate dehydrog | 100.0 | |
| PRK13805 | 862 | bifunctional acetaldehyde-CoA/alcohol dehydrogenas | 100.0 | |
| cd07079 | 406 | ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu | 100.0 | |
| PRK00197 | 417 | proA gamma-glutamyl phosphate reductase; Provision | 100.0 | |
| KOG2453 | 507 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 100.0 | |
| TIGR00407 | 398 | proA gamma-glutamyl phosphate reductase. The prosi | 100.0 | |
| cd07077 | 397 | ALDH-like NAD(P)+-dependent aldehyde dehydrogenase | 100.0 | |
| cd06534 | 367 | ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s | 100.0 | |
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 100.0 | |
| cd07080 | 422 | ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac | 100.0 | |
| COG0014 | 417 | ProA Gamma-glutamyl phosphate reductase [Amino aci | 99.92 | |
| KOG4165 | 433 | consensus Gamma-glutamyl phosphate reductase [Amin | 99.82 | |
| PF05893 | 399 | LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086 | 99.61 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 98.79 | |
| KOG2449 | 157 | consensus Methylmalonate semialdehyde dehydrogenas | 98.22 | |
| PF07368 | 215 | DUF1487: Protein of unknown function (DUF1487); In | 97.49 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 96.75 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 85.33 | |
| COG0141 | 425 | HisD Histidinol dehydrogenase [Amino acid transpor | 84.5 | |
| COG1438 | 150 | ArgR Arginine repressor [Transcription] | 83.99 |
| >PLN02466 aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-94 Score=761.26 Aligned_cols=447 Identities=84% Similarity=1.328 Sum_probs=421.9
Q ss_pred CccccchhhhcccccCCCc-ccccCCCCCchhHHHHHHhhhcccccccccccccCCCCCCCCCCCccCceecCEeeeCCC
Q 012802 1 MAARRIPLLLSRSFTSSSP-TLFSRGRDSSLCRAAAAAAASCGYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSAS 79 (456)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~G~~~~~~~ 79 (456)
||+||+|+||||+|+++++ +++++++++++++..+ ||++ +.+++|+++.+++++.++++||||+|+.+.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~---~~~~~~~~~~~~~~~~~~~~~I~G~~~~~~~ 71 (538)
T PLN02466 1 MAARRISSLLSRSLSASSSALLRSRGRNGGRGRGIR------RFST---AAAAVEEPITPPVQVSYTQLLINGQFVDAAS 71 (538)
T ss_pred CCchHHHHHHHHHhhcccHHHhhhccccCCCCcccc------cccc---ccccccCcCCCccccccccceECCEEecCCC
Confidence 8999999999999977654 7888999999999998 8877 6567999999999999999999999998777
Q ss_pred CCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCCh
Q 012802 80 GKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPF 159 (456)
Q Consensus 80 ~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 159 (456)
+++++++||+||+++++++.++.+|+++|++.|++||+++.|+.++.++|.++|+++++.|++++++|++++++|+|||+
T Consensus 72 ~~~~~v~~P~tg~~i~~v~~~~~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~GK~~ 151 (538)
T PLN02466 72 GKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLEKHNDELAALETWDNGKPY 151 (538)
T ss_pred CCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCcCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 88999999999999999999999999999999999998556999999999999999999999999999999999999999
Q ss_pred hhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecC
Q 012802 160 EQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239 (456)
Q Consensus 160 ~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps 239 (456)
.+++..|+..+++.++||+.+.++..+...+...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 152 ~~a~~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~l~~~~i~pALaaGN~VVlKPs 231 (538)
T PLN02466 152 EQSAKAELPMFARLFRYYAGWADKIHGLTVPADGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 231 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEecceEEEEECCCchHHHHHHHHHhHHHHcCCEEEeECC
Confidence 98876799999999999999988887765554344467899999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCc
Q 012802 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSP 319 (456)
Q Consensus 240 ~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~ 319 (456)
+.+|++++.++++|.++|+|+|+||+|+|++.+.+..|.+|++||+|+||||+.+|+.|++.++..++||+++|+|||||
T Consensus 232 ~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~~~aa~~~l~pv~lElGGknp 311 (538)
T PLN02466 232 EQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAKSNLKPVTLELGGKSP 311 (538)
T ss_pred CCCcHHHHHHHHHHHhcCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHhcCCCcEEEEcCCCCe
Confidence 99999999999999999999999999999777889999999999999999999999999999885489999999999999
Q ss_pred eEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHH
Q 012802 320 FIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKIL 399 (456)
Q Consensus 320 ~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~ 399 (456)
+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++.++++|+|+++++++||+++..+++++.
T Consensus 312 ~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~ 391 (538)
T PLN02466 312 FIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRVVGDPFKKGVEQGPQIDSEQFEKIL 391 (538)
T ss_pred EEEcCCCCHHHHHHHHHHHHHhhcCCCcCcCcEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCCccCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 400 KYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 400 ~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++|++++++|+++++||...+++|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 392 ~~v~~a~~~Ga~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~ 448 (538)
T PLN02466 392 RYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFK 448 (538)
T ss_pred HHHHHHHHCCCEEEecCCcCCCCceEEEEEEEecCCCCCchhcCCccCcEEEEEEeC
Confidence 999999999999999998755579999999999999999999999999999999996
|
|
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-96 Score=726.81 Aligned_cols=394 Identities=62% Similarity=1.010 Sum_probs=384.0
Q ss_pred CCcc-CceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 012802 63 VDYT-QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE 141 (456)
Q Consensus 63 ~~~~-~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~ 141 (456)
...+ ++||||+|++..++++|+++||.||+++++|+.++.+||+.++++|++||+.+.|++++..+|.++|++++++++
T Consensus 17 ~~~~~~lfin~e~~~~~s~kt~~~~nP~tg~~i~~v~~~~~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~~Adlie 96 (501)
T KOG2450|consen 17 IQPTLGLFINGEFVDSVSGKTFPVVNPATGEVIAKVAEATEEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRKLADLIE 96 (501)
T ss_pred ccchhheeecCeeecccCCceeeeecCCCCCeEEEeccccHHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHHHHHHHH
Confidence 3344 899999999999999999999999999999999999999999999999998667999999999999999999999
Q ss_pred hcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHH
Q 012802 142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221 (456)
Q Consensus 142 ~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 221 (456)
+++++|+.+++.+.|||+.+++..++..+++.+|||++|++++++...+.+..+..|+.++|+||++.|.|||||+.+..
T Consensus 97 ~~~~~lA~~E~~d~GKp~~~a~~~Dl~~~~~~~ry~ag~ad~~~~~~~~~~~~~~~yt~~eP~GV~G~I~pWN~Pllm~a 176 (501)
T KOG2450|consen 97 QDADVLAALEVLDNGKPYPEALVSDLPPAIDCFRYYAGWADKIHGSTIPTDGEFFAYTRREPIGVCGQIIPWNFPLLMQA 176 (501)
T ss_pred hhhHHHhhhcccccCCcchhhhhcCchhhhhHHHhhccchhhcccccCCCCCceEEEecCCcceeeeEeccCchHHHHHH
Confidence 99999999999999999999997899999999999999999999988888888999999999999999999999999999
Q ss_pred HHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHH
Q 012802 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (456)
Q Consensus 222 ~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~ 301 (456)
|+++|||++||+||+||++++|++++.+++++.++|+|+|++|+|+|.|.+.+.+|.+|++|++|+||||+.+|+.|++.
T Consensus 177 wKlaPALa~GNtvV~Kpae~tplsal~~~~l~~eaG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I~~a 256 (501)
T KOG2450|consen 177 WKLAPALAAGNTVVLKPAEQTPLTALYLASLCKEAGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKEIMEA 256 (501)
T ss_pred HhhhhHHhhCcEEEecCCCCCCchHHHHHHHhHHhcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhh-cccCCCC
Q 012802 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK-RVVGDPF 380 (456)
Q Consensus 302 aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~-~~~G~p~ 380 (456)
++.+++||+++|||||+|.||++|+|+|.|++.++.+.|+|+||.|++.+|+|||+++||+|+++++++.++ +++|||+
T Consensus 257 aa~~n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iydefv~~~v~~a~~~~kvGdP~ 336 (501)
T KOG2450|consen 257 AAESNLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIYDEFVEKFVAAAKKKLKVGDPF 336 (501)
T ss_pred hhhcCCceeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechHHHHHHHHHHHHHhcccccCCCC
Confidence 998899999999999999999999999999999999999999999999999999999999999999999966 9999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 381 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 381 ~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++.+.+||++++.|++||.+||+.++++||++++||.+..++|||++|||+.++.++|.|++|||||||++|++|+
T Consensus 337 ~~~~~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~ 412 (501)
T KOG2450|consen 337 DEGTEQGPQISKTQYEKILGYIESGKKEGATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFK 412 (501)
T ss_pred CcccccccccCHHHHHHHHHHHHHHHhcCCEEEecCcccCCCceEECCeeccCCChhhhhhHhhccCceEEEEecC
Confidence 9999999999999999999999999999999999999888899999999999999999999999999999999996
|
|
| >KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-91 Score=664.86 Aligned_cols=388 Identities=39% Similarity=0.682 Sum_probs=372.9
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 012802 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (456)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (456)
..+.||+|+|+++.++++|++.||++||+|+.+++.+.+|.+.|++.|++||. .|++++..+|.++|++|.++|.+|.
T Consensus 23 ~~~~~igGkWv~s~~~~tF~V~nPa~geii~~V~~~~V~e~~kAI~aA~EaF~--s~~~~takeRs~lLrkwy~Li~en~ 100 (503)
T KOG2451|consen 23 RAQSYIGGKWVDSPDNKTFEVDNPANGEIIGKVADMTVEEAEKAIDAAYEAFK--SYRNLTAKERSALLRKWYELIMENK 100 (503)
T ss_pred chhccccceeeccCCCCeeeccCCCccchhhcccCCcHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHhch
Confidence 46889999999998999999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCC-CCCceEEEEEccceEEEEEcCcChhHHHHHHH
Q 012802 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (456)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (456)
|+|++++++|+|||+.++. +|+..+..++.||++.++++.|...+. .......+.++|+||+++|+|||||..+...+
T Consensus 101 ddLa~iiTlE~GKpL~eA~-gEv~y~a~f~eWyAeEA~RvyGdii~s~~~~rr~i~ikQPvGV~alItPWNFP~AMItRK 179 (503)
T KOG2451|consen 101 DDLATIITLENGKPLGEAK-GEVAYSAAFFEWYAEEARRVYGDIIPSLNPNRRLIVIKQPVGVVALITPWNFPAAMITRK 179 (503)
T ss_pred HHHHHHHhhhcCCchhhcc-ceeehhHHHHHHHHHHhhhhhccccCCCCCCceEEEEeccceeEEEecCcCChHHHHHhH
Confidence 9999999999999999986 599999999999999999999987764 34667789999999999999999999999999
Q ss_pred HhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCC---chHHHHHHHcCCCccEEEEeCChHHHHHHHH
Q 012802 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY---GPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (456)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~---~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~ 300 (456)
..+||++||+||+||+++||++++.++++..+||+|+|++|+|+++ ..++++.|..+|+|++|+||||+.+|+.+++
T Consensus 180 ~gAALAaGCTvVvkPs~~TPlsaLala~lA~~AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VGKiL~~ 259 (503)
T KOG2451|consen 180 AGAALAAGCTVVVKPSEDTPLSALALAKLAEEAGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVGKILMA 259 (503)
T ss_pred HHHHHhcCceEEEccCCCCchHHHHHHHHHHHcCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHHHHHHH
Confidence 9999999999999999999999999999999999999999999963 4578999999999999999999999999999
Q ss_pred HHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCC
Q 012802 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380 (456)
Q Consensus 301 ~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~ 380 (456)
+++. .+|++.+||||+.|+||++|||+|+|++.....+|.|+||.|.+++|+|||+++||+|+++|.++++++++||.+
T Consensus 260 qsas-tvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iyD~Fv~~l~e~vkkl~vGdG~ 338 (503)
T KOG2451|consen 260 QSAS-TVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIYDKFVSKLAEAVKKLKVGDGL 338 (503)
T ss_pred hhhh-hhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhHHHHHHHHHHHHHheeccCCC
Confidence 9987 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccC-CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 381 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 381 ~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
|+++++||+|+..+.+|++.++++|+.+|++|++||+... .+++|++||||.+|+++|.+.+||+|||+.+|++||
T Consensus 339 ~~~tt~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kFd 415 (503)
T KOG2451|consen 339 DPGTTQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERSELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKFD 415 (503)
T ss_pred CCCCccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEccccCCccccceEeecCCccceeeccccccccceeeeeC
Confidence 9999999999999999999999999999999999999554 455999999999999999999999999999999996
|
|
| >COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-86 Score=687.56 Aligned_cols=381 Identities=51% Similarity=0.850 Sum_probs=364.0
Q ss_pred CceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHH
Q 012802 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (456)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ 146 (456)
++||||+|++..+ +++++||.||+++++++.++.+|+++|+++|+.||+ .|+++++.+|.++|+++++.|+++.++
T Consensus 2 ~~~i~g~~~~~~~--~~~~~nP~tg~~i~~~~~a~~~dv~~Av~aA~~a~~--~W~~~~~~eR~~iL~~~a~~l~~~~~e 77 (472)
T COG1012 2 KLLIDGEWVDGAS--TIEVINPATGEVIATVPAATAEDVDAAVAAARAAFE--AWSRLSAEERAAILRRIADLLEARAEE 77 (472)
T ss_pred CccCCCeecCCCC--ceeeeCCCCCCEEeeecCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 6799999998654 899999999999999999999999999999999998 999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhh
Q 012802 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 226 (456)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 226 (456)
|+.++++|+|||+.+++. |+..+++.++|+++.++++.+...+.+.+...+++++|+|||++|+|||||+++.+|+++|
T Consensus 78 la~~~~~e~Gk~i~ea~~-ei~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~ap 156 (472)
T COG1012 78 LAALITLETGKPISEARG-EIARAADFIRYYAEEARRLEGETIPTDKGSKALVRREPLGVVGAITPWNFPLALAAWKLAP 156 (472)
T ss_pred HHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccCCCCCcceEEEeecceEEEEECCCCCHHHHHHhhHHH
Confidence 999999999999999886 6999999999999999988777644444678899999999999999999999999999999
Q ss_pred hhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCC
Q 012802 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306 (456)
Q Consensus 227 ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~ 306 (456)
||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+.++.|+.||+|++|+||||+.+|+.|++.+++ +
T Consensus 157 ALaaGntVV~KPse~tp~sa~~l~~~~~~aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~~Aa~-~ 235 (472)
T COG1012 157 ALAAGNTVVLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAA-N 235 (472)
T ss_pred HHHcCCEEEEECcccCcHHHHHHHHHHHHhCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHHHHhh-c
Confidence 999999999999999999999999999999999999999999877799999999999999999999999999999997 9
Q ss_pred CCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhh-cccCCCCCCCCc
Q 012802 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK-RVVGDPFKGGIQ 385 (456)
Q Consensus 307 ~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~-~~~G~p~~~~~~ 385 (456)
+||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|.++ ++ +++|||.|+.++
T Consensus 236 ~k~~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~-~~~l~~Gd~~d~~t~ 314 (472)
T COG1012 236 LKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVAR-AASLKVGDPLDPSTD 314 (472)
T ss_pred CCcEEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhHHHHHHHHHHH-HhcCCCCCCCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999 65 899998999999
Q ss_pred cccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 386 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 386 ~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+||+++.++++++.++|++++++|+++++||.. .. |+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 315 ~Gpli~~~~~~~v~~~i~~a~~~G~~~~~Gg~~-~~-g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~ 383 (472)
T COG1012 315 LGPLISEEQLDRVEGYIEDAVAEGARLLAGGKR-PG-GYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFK 383 (472)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcC-CC-CeEECCEEEecCCCCChhhhccccCCceEEEEeC
Confidence 999999999999999999999999999999983 33 9999999999999999999999999999999996
|
|
| >PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-86 Score=687.69 Aligned_cols=387 Identities=38% Similarity=0.678 Sum_probs=366.2
Q ss_pred cCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHH
Q 012802 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (456)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (456)
.++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++||+ .|+.++.++|.++|+++++.|+++++
T Consensus 11 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~v~~~~~~~~~~v~~av~~A~~a~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ 88 (482)
T PRK11241 11 QQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKERANILRRWFNLMMEHQD 88 (482)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 3689999999766678899999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCC-CCceEEEEEccceEEEEEcCcChhHHHHHHHH
Q 012802 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (456)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 224 (456)
+|++++++|+|||+.+++. |+..+++.++|++.++++..+...+.. .+...+++++|+|||++|+|||||+...++++
T Consensus 89 ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 167 (482)
T PRK11241 89 DLARLMTLEQGKPLAEAKG-EISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKA 167 (482)
T ss_pred HHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEeeceEEEEECCCcChHHHHHHHH
Confidence 9999999999999999874 999999999999998887665543321 23456789999999999999999999999999
Q ss_pred hhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhh
Q 012802 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304 (456)
Q Consensus 225 ~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~ 304 (456)
++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+|+|++.+.+..|+.|++|+.|+||||+++|+.|++.+++
T Consensus 168 ~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~~~aa~ 247 (482)
T PRK11241 168 GPALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAK 247 (482)
T ss_pred HHHHHhCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999777889999999999999999999999999999988
Q ss_pred CCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCC
Q 012802 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384 (456)
Q Consensus 305 ~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 384 (456)
+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|+++++
T Consensus 248 -~l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~ 326 (482)
T PRK11241 248 -DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLEKGV 326 (482)
T ss_pred -cCCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 385 ~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++||++++.+++++.++|++++++|+++++||.....+|+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 327 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~ 398 (482)
T PRK11241 327 TIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFK 398 (482)
T ss_pred CcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCCCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeC
Confidence 999999999999999999999999999999997543469999999999999999999999999999999996
|
|
| >PLN02766 coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-85 Score=686.69 Aligned_cols=394 Identities=58% Similarity=0.973 Sum_probs=370.8
Q ss_pred CCccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHh
Q 012802 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (456)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~ 142 (456)
+..+++||||+|+.+.++.+++++||+||+++++++.++.+|++++++.|++||+.+.|+.++.++|.++|+++++.|++
T Consensus 18 ~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~ 97 (501)
T PLN02766 18 IKFTKLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPWPRMSGFERGRIMMKFADLIEE 97 (501)
T ss_pred cccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHH
Confidence 33457899999998767789999999999999999999999999999999999975469999999999999999999999
Q ss_pred cHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHH
Q 012802 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (456)
Q Consensus 143 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (456)
++++|++++++|+|||+.+++..|+..+++.++|++..+++..+...+.......++.++|+|||++|+|||||+...++
T Consensus 98 ~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 177 (501)
T PLN02766 98 HIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGETLKMSRQLQGYTLKEPIGVVGHIIPWNFPSTMFFM 177 (501)
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCceEEEEeccceEEEEECCCCChHHHHHH
Confidence 99999999999999999888766999999999999998887766544333345677899999999999999999999999
Q ss_pred HHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHH
Q 012802 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (456)
Q Consensus 223 ~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~a 302 (456)
++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|++.+.+..|+.|++||.|+||||+.+|+.|++.+
T Consensus 178 ~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~~~G~~i~~~a 257 (501)
T PLN02766 178 KVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQAA 257 (501)
T ss_pred HHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHhcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999997778899999999999999999999999999998
Q ss_pred hhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCC
Q 012802 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 382 (456)
Q Consensus 303 a~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~ 382 (456)
+..+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++
T Consensus 258 a~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~d~f~~~l~~~~~~l~~G~p~~~ 337 (501)
T PLN02766 258 ATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGDPFDP 337 (501)
T ss_pred hhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCCCC
Confidence 84489999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 383 ~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++++||+++..+++++.++|++++++|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 338 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~ 411 (501)
T PLN02766 338 RARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFK 411 (501)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhCCccCceEEEEEeC
Confidence 99999999999999999999999999999999997644579999999999999999999999999999999996
|
|
| >PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-85 Score=691.01 Aligned_cols=386 Identities=32% Similarity=0.478 Sum_probs=364.7
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 012802 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (456)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (456)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|++.|++||+ .|+.++.++|.++|+++++.|++++
T Consensus 113 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eR~~iL~k~a~~L~~~~ 190 (604)
T PLN02419 113 RVPNLIGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFP--LWRNTPITTRQRVMLKFQELIRKNM 190 (604)
T ss_pred ccceeECCEEecCCCCceEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhH
Confidence 46889999999876678899999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCC-CCCceEEEEEccceEEEEEcCcChhHHHHHHH
Q 012802 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (456)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (456)
++|++++++|+|||+.+++. |+..+++.++|++++++...+...+. ..+...+++++|+|||++|+|||||+...+++
T Consensus 191 ~ela~~~~~E~GKp~~ea~~-EV~~~i~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~reP~GVV~~I~PwNfPl~l~~~~ 269 (604)
T PLN02419 191 DKLAMNITTEQGKTLKDSHG-DIFRGLEVVEHACGMATLQMGEYLPNVSNGVDTYSIREPLGVCAGICPFNFPAMIPLWM 269 (604)
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhhCCcccccCCCccceEEecCccEEEEECCCccHHHHHHHH
Confidence 99999999999999999874 99999999999999988776654432 23445678999999999999999999999999
Q ss_pred HhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHh
Q 012802 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (456)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa 303 (456)
+++||++||+||+|||+.+|+++..+++++.++|+|+|+||+|+|++ +.+..|+.|++|++|+||||+.+|+.|++.++
T Consensus 270 iapALaAGNtVVlKPSe~tp~ta~~l~~l~~eAGlP~GvvnvV~G~~-~~~~~L~~~~~Vd~V~FTGSt~vG~~I~~~Aa 348 (604)
T PLN02419 270 FPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGTN-DTVNAICDDEDIRAVSFVGSNTAGMHIYARAA 348 (604)
T ss_pred HHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCcCcceEEEEeCCh-HHHHHHHhCCCCCEEEEeCChHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999864 57888999999999999999999999999988
Q ss_pred hCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCC
Q 012802 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (456)
Q Consensus 304 ~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 383 (456)
. +++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||++ +|+|+++|.++++++++|+|.|++
T Consensus 349 ~-~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv~V~~~-~d~f~e~l~~~~~~l~vG~p~d~~ 426 (604)
T PLN02419 349 A-KGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGD-AKSWEDKLVERAKALKVTCGSEPD 426 (604)
T ss_pred c-cCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEEEEeCc-HHHHHHHHHHHHHHhccCCCCCCC
Confidence 7 89999999999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCccc----CCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL----GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 384 ~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++|||++++.+++++.++|++++++|+++++||... .++|+|++||||.+++++|.+++||+||||++|++|+
T Consensus 427 t~~GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eEiFGPVl~V~~~~ 503 (604)
T PLN02419 427 ADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQAN 503 (604)
T ss_pred CCccCCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCCCcCCEEEEEecC
Confidence 999999999999999999999999999999999752 1469999999999999999999999999999999986
|
|
| >cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-84 Score=678.30 Aligned_cols=391 Identities=46% Similarity=0.834 Sum_probs=368.6
Q ss_pred cCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHH
Q 012802 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (456)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (456)
.++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++||..+.|++++..+|.++|+++++.|+++++
T Consensus 6 ~~~~I~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 85 (486)
T cd07140 6 HQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEHQE 85 (486)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 46899999998767789999999999999999999999999999999999974469999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCC----CCceEEEEEccceEEEEEcCcChhHHHHH
Q 012802 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD----GPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221 (456)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 221 (456)
+|++++++|+|||+.++...|+..+++.++|++.+.++..+...+.. .....+++++|+|||++|+|||||+...+
T Consensus 86 ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~~~ 165 (486)
T cd07140 86 ELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLA 165 (486)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEeeccceEEEEcCCchHHHHHH
Confidence 99999999999999988767999999999999999887766544321 22346789999999999999999999999
Q ss_pred HHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHH
Q 012802 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (456)
Q Consensus 222 ~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~ 301 (456)
+++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++..|..|++|++|+||||+.+|+.|++.
T Consensus 166 ~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 245 (486)
T cd07140 166 WKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKS 245 (486)
T ss_pred HHHHHHHHhCCEEEEECCccCcHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999777889999999999999999999999999999
Q ss_pred HhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCC
Q 012802 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381 (456)
Q Consensus 302 aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~ 381 (456)
++..+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++.++++|+|++
T Consensus 246 aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~~~f~~~l~~~~~~l~~g~p~~ 325 (486)
T cd07140 246 CAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGDPLD 325 (486)
T ss_pred HHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhCCccCCCC
Confidence 88547899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 382 ~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++++||++++.+++++.++|++++++|+++++||...+.+|+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 326 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~ 400 (486)
T cd07140 326 RSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFD 400 (486)
T ss_pred CCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEcC
Confidence 999999999999999999999999999999999997655578999999999999999999999999999999985
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. |
| >cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-84 Score=676.02 Aligned_cols=393 Identities=80% Similarity=1.320 Sum_probs=371.1
Q ss_pred CccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 012802 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (456)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (456)
+++++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++||+.+.|+.++.++|.++|+++++.|+++
T Consensus 2 ~~~~~~i~g~~~~~~~~~~~~v~~P~t~~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 81 (476)
T cd07142 2 KHTKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKH 81 (476)
T ss_pred CcccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHHHHHHHHHHh
Confidence 45788999999987677889999999999999999999999999999999999744599999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHH
Q 012802 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (456)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (456)
+++|++++++|+|||+.+++..|+..+++.++|++.+.++..+...+...+...++.++|+|||++|+|||||+...+++
T Consensus 82 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~ 161 (476)
T cd07142 82 ADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMTLPADGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWK 161 (476)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEeceeeEEEECCCccHHHHHHHH
Confidence 99999999999999999887669999999999999998887766554333455678999999999999999999999999
Q ss_pred HhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHh
Q 012802 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (456)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa 303 (456)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+.+..|..|+++|.|+||||+.+|+.|++.++
T Consensus 162 i~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~~~aa 241 (476)
T cd07142 162 VGPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAA 241 (476)
T ss_pred HHHHHHcCCEEEEECCCcccHHHHHHHHHHHHcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999977778999999999999999999999999999988
Q ss_pred hCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCC
Q 012802 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (456)
Q Consensus 304 ~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 383 (456)
+.+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.+++.++++|+|.+++
T Consensus 242 ~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 321 (476)
T cd07142 242 KSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPFRKG 321 (476)
T ss_pred HcCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 54789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 384 ~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++||+++..+++++.++|++++++|+++++||...+.+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 322 ~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~ 394 (476)
T cd07142 322 VEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFK 394 (476)
T ss_pred CcCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCCCCeeEccEEeecCCCCChhhhCCccCceEEEEeeC
Confidence 9999999999999999999999999999999998755579999999999999999999999999999999986
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. |
| >TIGR03374 ABALDH 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-83 Score=666.27 Aligned_cols=386 Identities=39% Similarity=0.673 Sum_probs=363.0
Q ss_pred cCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHH
Q 012802 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (456)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (456)
.++||||+|+.+ ++.+++++||.||+++++++.++.+|++++++.|++||+ .|+.++.++|.++|+++++.|+++++
T Consensus 2 ~~~~i~g~~~~~-~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 78 (472)
T TIGR03374 2 HKLLINGELVSG-EGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFA--EWGQTTPKARAECLLKLADVIEENAQ 78 (472)
T ss_pred CCceECCEEecC-CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 478999999975 467899999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCC-CCCceEEEEEccceEEEEEcCcChhHHHHHHHH
Q 012802 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (456)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 224 (456)
+|++++++|+|||+.++...|+..+++.++|++...+.+.+...+. ..+...++.++|+|||++|+|||||+...++++
T Consensus 79 ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 158 (472)
T TIGR03374 79 VFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKL 158 (472)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccCCCceEEEEEecceEEEEECCCCchHHHHHHHH
Confidence 9999999999999988766699999999999998877665542221 124457889999999999999999999999999
Q ss_pred hhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhh
Q 012802 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304 (456)
Q Consensus 225 ~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~ 304 (456)
++||++||+||+|||+.+|+++..+++++.++ +|+|++|+++|++.+++..|+.|++||+|+||||+++|+.|++.++.
T Consensus 159 ~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~ 237 (472)
T TIGR03374 159 APALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAP 237 (472)
T ss_pred HHHHhcCCEEEecCCCCCCHHHHHHHHHHHHh-CCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhh
Confidence 99999999999999999999999999999985 99999999999777889999999999999999999999999999987
Q ss_pred CCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCC
Q 012802 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384 (456)
Q Consensus 305 ~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 384 (456)
++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++
T Consensus 238 -~~~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~ 316 (472)
T TIGR03374 238 -SIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPDDEST 316 (472)
T ss_pred -cccceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHHhhCC-CEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 385 QQGPQIDSEQFEKILKYIRSGVDGG-AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 385 ~~Gp~i~~~~~~~~~~~i~~a~~~G-a~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++||+++..+++++.++|++++++| +++++||....+.|+|+.|||+.+++++|++++||+||||++|++|+
T Consensus 317 ~~Gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~ 389 (472)
T TIGR03374 317 ELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFD 389 (472)
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccCCCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEEC
Confidence 9999999999999999999999999 79999997654468999999999999999999999999999999996
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. |
| >cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-82 Score=665.93 Aligned_cols=386 Identities=41% Similarity=0.688 Sum_probs=363.4
Q ss_pred ceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHH
Q 012802 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI 147 (456)
Q Consensus 68 ~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~l 147 (456)
+||||+|+.+.++++++++||.||+++++++.++.+|++++++.|++||+. .|++++.++|.++|+++++.|++++++|
T Consensus 2 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~-~w~~~~~~~R~~~L~~~a~~l~~~~~el 80 (477)
T cd07113 2 HFIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFVS-AWAKTTPAERGRILLRLADLIEQHGEEL 80 (477)
T ss_pred CeECCEEecCCCCCeEeeeCCCCCCEEEEEcCCCHHHHHHHHHHHHHHhHh-hhccCCHHHHHHHHHHHHHHHHHCHHHH
Confidence 689999998766788999999999999999999999999999999999972 3999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCC------CCCceEEEEEccceEEEEEcCcChhHHHHH
Q 012802 148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA------DGPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221 (456)
Q Consensus 148 a~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~------~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 221 (456)
++++++|+|||+.+++..|+..+++.++|++++..+..+...+. ..+...+++++|+|||++|+|||||+...+
T Consensus 81 a~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 160 (477)
T cd07113 81 AQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAV 160 (477)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCCChHHHHHH
Confidence 99999999999998875699999999999999888766544321 123456789999999999999999999999
Q ss_pred HHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHH
Q 012802 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (456)
Q Consensus 222 ~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~ 301 (456)
+++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++. .+..|+.|++||+|+||||+.+|+.|++.
T Consensus 161 ~~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~aglP~gvv~~v~g~~~-~~~~L~~~~~v~~V~fTGS~~~G~~i~~~ 239 (477)
T cd07113 161 WKIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGA-VGAQLISHPDVAKVSFTGSVATGKKIGRQ 239 (477)
T ss_pred HHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCcCCCcEEEEecCch-HHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998766 88999999999999999999999999999
Q ss_pred HhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCC
Q 012802 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381 (456)
Q Consensus 302 aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~ 381 (456)
+++ +++|+++|+||+||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|
T Consensus 240 aa~-~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~ 318 (477)
T cd07113 240 AAS-DLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSPMD 318 (477)
T ss_pred HHh-hcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 987 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 382 ~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++++||++++.+++++.++|++++++|+++++||....++|+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 319 ~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~ 393 (477)
T cd07113 319 ESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYE 393 (477)
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeC
Confidence 999999999999999999999999999999999997654569999999999999999999999999999999986
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. |
| >PLN02278 succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-82 Score=666.82 Aligned_cols=387 Identities=43% Similarity=0.725 Sum_probs=366.7
Q ss_pred cCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHH
Q 012802 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (456)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (456)
.++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++||+ .|+.++.++|.++|+++++.|+++.+
T Consensus 25 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ 102 (498)
T PLN02278 25 TQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFP--SWSKLTASERSKILRRWYDLIIANKE 102 (498)
T ss_pred ccceECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 4689999999866678999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCC-CCceEEEEEccceEEEEEcCcChhHHHHHHHH
Q 012802 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (456)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 224 (456)
+|++++++|+|||..++.. |+..+++.++|++...++..+...+.. .+...+++++|+|||++|+|||||+.+.++++
T Consensus 103 ~la~~~~~e~Gk~~~~a~~-Ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~i 181 (498)
T PLN02278 103 DLAQLMTLEQGKPLKEAIG-EVAYGASFLEYFAEEAKRVYGDIIPSPFPDRRLLVLKQPVGVVGAITPWNFPLAMITRKV 181 (498)
T ss_pred HHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEeecccEEEEECCCccHHHHHHHHH
Confidence 9999999999999999874 999999999999999887766544322 24456788999999999999999999999999
Q ss_pred hhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhh
Q 012802 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304 (456)
Q Consensus 225 ~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~ 304 (456)
++||++||+||+|||+.+|+++..+.++|.++|+|+|++|+|+|++.+.+..|+.|++||+|+||||+.+|+.|++.+++
T Consensus 182 ~~ALaaGN~VVlKps~~tp~~~~~l~~~l~eaglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~ 261 (498)
T PLN02278 182 GPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAAA 261 (498)
T ss_pred HHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCChhhHHHHhcCCCcCEEEEECcHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999777788999999999999999999999999999887
Q ss_pred CCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCC
Q 012802 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384 (456)
Q Consensus 305 ~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 384 (456)
+++|+++|+|||||+||++|||+|.|++.|++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++++
T Consensus 262 -~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~ 340 (498)
T PLN02278 262 -TVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFSKAVQKLVVGDGFEEGV 340 (498)
T ss_pred -cCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 385 ~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++||++++.+++++.++|++++++|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 341 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~v~~~~ 412 (498)
T PLN02278 341 TQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFK 412 (498)
T ss_pred cCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCceEeeEEEecCCCCChhhhCCCcCCEEEEEeeC
Confidence 999999999999999999999999999999997644468999999999999999999999999999999996
|
|
| >cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-82 Score=664.82 Aligned_cols=395 Identities=63% Similarity=1.058 Sum_probs=371.6
Q ss_pred CCCccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHHHHH
Q 012802 62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLL 140 (456)
Q Consensus 62 ~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~-~W~~~~~~~R~~~L~~~a~~l 140 (456)
.++.+++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++||..+ .|++++.++|.++|+++++.|
T Consensus 3 ~~~~~~~~I~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L~~~a~~l 82 (481)
T cd07141 3 EIKYTKIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLI 82 (481)
T ss_pred ccccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHH
Confidence 4556789999999987677899999999999999999999999999999999999742 699999999999999999999
Q ss_pred HhcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHH
Q 012802 141 ERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220 (456)
Q Consensus 141 ~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~ 220 (456)
+++.++|++++++|+|||..++...|+..+++.++|++++.++..+...+...+...+.+++|+|||++|+|||||+...
T Consensus 83 ~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~ 162 (481)
T cd07141 83 ERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKTIPMDGDFFTYTRHEPVGVCGQIIPWNFPLLMA 162 (481)
T ss_pred HHhHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEEeceeEEEEEccChhHHHHH
Confidence 99999999999999999997666669999999999999998888775544334456788999999999999999999999
Q ss_pred HHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHH
Q 012802 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (456)
Q Consensus 221 ~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~ 300 (456)
++++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+|++++.+.+..|..|++||.|+||||+.+|+.|++
T Consensus 163 ~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~ 242 (481)
T cd07141 163 AWKLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQ 242 (481)
T ss_pred HHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999977778899999999999999999999999999
Q ss_pred HHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCC
Q 012802 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380 (456)
Q Consensus 301 ~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~ 380 (456)
.++..+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+
T Consensus 243 ~aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~ 322 (481)
T cd07141 243 AAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGNPF 322 (481)
T ss_pred HhhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 88754789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 381 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 381 ~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
|+++++||++++.+++++.++|++++++|+++++||...++.|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 323 ~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~ 398 (481)
T cd07141 323 DPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFK 398 (481)
T ss_pred CCCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhccccCCeEEEEeeC
Confidence 9999999999999999999999999999999999998755579999999999999999999999999999999996
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. |
| >PRK13252 betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-82 Score=665.64 Aligned_cols=389 Identities=43% Similarity=0.754 Sum_probs=367.6
Q ss_pred CccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 012802 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (456)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (456)
.+.++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++|++ .|+.++.++|.++|+++++.|+++
T Consensus 5 ~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~ 82 (488)
T PRK13252 5 PLQSLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQK--IWAAMTAMERSRILRRAVDILRER 82 (488)
T ss_pred ccccccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHh
Confidence 346889999999876778999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHH
Q 012802 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (456)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (456)
+++|++++++|+|||+.+++..|+..+++.++|++++.+.+.+...+...+...+++++|+|||++|+|||||+...+++
T Consensus 83 ~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~~ 162 (488)
T PRK13252 83 NDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGEQIPLRGGSFVYTRREPLGVCAGIGAWNYPIQIACWK 162 (488)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCceEEEEEeeeeEEEEECCCchHHHHHHHH
Confidence 99999999999999999987669999999999999988877665444333456788999999999999999999999999
Q ss_pred HhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHh
Q 012802 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (456)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa 303 (456)
+++||++||+||+|||+.+|+++..++++|.++|+|+|+||++++++. .+..|+.|+++|.|+||||+.+|+.|.+.++
T Consensus 163 ~~~ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~aglP~g~v~~v~g~~~-~~~~L~~~~~vd~V~fTGS~~~g~~i~~~aa 241 (488)
T PRK13252 163 SAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQGDGR-VGAWLTEHPDIAKVSFTGGVPTGKKVMAAAA 241 (488)
T ss_pred HHHHHhcCCeEEEeCCccCcHHHHHHHHHHHHcCcCcccEEEEecCcH-HHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999998665 8899999999999999999999999999988
Q ss_pred hCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCC
Q 012802 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (456)
Q Consensus 304 ~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 383 (456)
. +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.+++
T Consensus 242 ~-~l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 320 (488)
T PRK13252 242 A-SLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIGDPMDPA 320 (488)
T ss_pred h-cCCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 7 799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 384 ~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++||++++.+++++.++|++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 321 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~ 397 (488)
T PRK13252 321 TNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFD 397 (488)
T ss_pred CcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEeeC
Confidence 9999999999999999999999999999999996432 369999999999999999999999999999999986
|
|
| >PLN02315 aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-82 Score=664.42 Aligned_cols=386 Identities=28% Similarity=0.499 Sum_probs=361.5
Q ss_pred CCccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHh
Q 012802 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (456)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~ 142 (456)
+.+.++||||+|+.+ +.+++++||.||+++++++.++.+|+++|+++|++||+ .|++++..+|.++|+++++.|++
T Consensus 18 ~~~~~~~I~G~~~~~--~~~~~~~nP~t~~~i~~~~~a~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~ 93 (508)
T PLN02315 18 SRNLGCYVGGEWRAN--GPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAK--IWMQVPAPKRGEIVRQIGDALRA 93 (508)
T ss_pred ccccCceECCEEecC--CCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHh
Confidence 334688999999853 57899999999999999999999999999999999999 99999999999999999999999
Q ss_pred cHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCC-CCceEEEEEccceEEEEEcCcChhHHHHH
Q 012802 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221 (456)
Q Consensus 143 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 221 (456)
+.++|++++++|+|||+.++. .|+..+++.++|+++.++++.+...+.. .+...+..++|+|||++|+|||||+..++
T Consensus 94 ~~~~la~~~~~e~GK~~~~a~-~ev~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 172 (508)
T PLN02315 94 KLDYLGRLVSLEMGKILAEGI-GEVQEIIDMCDFAVGLSRQLNGSIIPSERPNHMMMEVWNPLGIVGVITAFNFPCAVLG 172 (508)
T ss_pred HHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceEEEEECCCcchHHHHH
Confidence 999999999999999999986 5999999999999998887766544322 23455778999999999999999999999
Q ss_pred HHHhhhhhcCCEEEeecCCCChhHHHH----HHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHH
Q 012802 222 WKVGPALACGNTIVLKTAEQTPLSALY----VSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 297 (456)
Q Consensus 222 ~~l~~ALaaGN~VVlkps~~~p~~~~~----l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~ 297 (456)
+++++||++||+||+|||+.+|+++.. +.+++.++|+|+|++|++++ +.+.+..|..|+++++|+||||+.+|+.
T Consensus 173 ~~~~~ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g-~~~~~~~l~~~~~v~~v~fTGS~~~G~~ 251 (508)
T PLN02315 173 WNACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCG-GAEIGEAIAKDTRIPLVSFTGSSKVGLM 251 (508)
T ss_pred HHHhHHHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecC-ChHHHHHHhcCCCCCEEEEECCHHHHHH
Confidence 999999999999999999999999887 67788999999999999998 7778999999999999999999999999
Q ss_pred HHHHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccC
Q 012802 298 VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 377 (456)
Q Consensus 298 i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G 377 (456)
|++.++. +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|.++++++++|
T Consensus 252 v~~~aa~-~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG 330 (508)
T PLN02315 252 VQQTVNA-RFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQVKIG 330 (508)
T ss_pred HHHHHHh-cCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhcCCC
Confidence 9999887 889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 378 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 378 ~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+|.++++++||+++..+++++.+++++++++|+++++||...+.+|+|++|||+ +++++|.+++||+||||++|++|+
T Consensus 331 ~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl-~v~~~~~i~~eE~FGPVl~V~~~~ 408 (508)
T PLN02315 331 DPLEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQPTIV-EISPDADVVKEELFGPVLYVMKFK 408 (508)
T ss_pred CCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEecEEE-ecCCCChHHhCCCcCCEEEEEEeC
Confidence 999999999999999999999999999999999999999765557999999999 699999999999999999999996
|
|
| >PLN02467 betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-82 Score=662.05 Aligned_cols=390 Identities=43% Similarity=0.741 Sum_probs=367.3
Q ss_pred CCccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhc-----ccCCCCCCCHHHHHHHHHHHH
Q 012802 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAF-----DEGPWPRMTAYERSKIILRFA 137 (456)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~-----~~~~W~~~~~~~R~~~L~~~a 137 (456)
+...++||||+|+.+.++++++++||+||+++++++.++.+|+++|++.|++|| . .|++++..+|.++|++++
T Consensus 5 ~~~~~~~I~g~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~dv~~av~~A~~a~~~~~~~--~W~~~~~~~R~~~L~~~a 82 (503)
T PLN02467 5 VPRRQLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGK--DWARTTGAVRAKYLRAIA 82 (503)
T ss_pred cCccCceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcccc--hhhcCCHHHHHHHHHHHH
Confidence 344588999999987677899999999999999999999999999999999999 6 899999999999999999
Q ss_pred HHHHhcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCccc---CCC-CCceEEEEEccceEEEEEcCc
Q 012802 138 DLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA---PAD-GPYHVQTLHEPIGVAGQIIPW 213 (456)
Q Consensus 138 ~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~---~~~-~~~~~~~~~~P~GVv~~i~p~ 213 (456)
+.|++++++|++++++|+|||+.+++. |+..+++.++||+.+++++.+... ... .+...+++++|+|||++|+||
T Consensus 83 ~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~Pw 161 (503)
T PLN02467 83 AKITERKSELAKLETLDCGKPLDEAAW-DMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPW 161 (503)
T ss_pred HHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCC
Confidence 999999999999999999999999874 999999999999999888765431 111 234578899999999999999
Q ss_pred ChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChH
Q 012802 214 NFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 293 (456)
Q Consensus 214 n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~ 293 (456)
|||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.+.+..|+.|++|+.|+||||+.
T Consensus 162 N~P~~~~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~eag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~ 241 (503)
T PLN02467 162 NYPLLMATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTA 241 (503)
T ss_pred ChHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHcCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHH
Confidence 99999999999999999999999999999999999999999999999999999997778899999999999999999999
Q ss_pred HHHHHHHHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhh
Q 012802 294 TGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK 373 (456)
Q Consensus 294 ~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~ 373 (456)
+|+.|++.++. ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.+++++
T Consensus 242 ~g~~v~~~aa~-~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~ 320 (503)
T PLN02467 242 TGRKIMTAAAQ-MVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAKN 320 (503)
T ss_pred HHHHHHHHHhc-cCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHHHHHHHHHHHHHHh
Confidence 99999999887 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccC--CCCceEecEEEeeCCCCCcccccccccceeE
Q 012802 374 RVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQS 451 (456)
Q Consensus 374 ~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~ 451 (456)
+++|||.|+++++||+++..+++++.++|++++.+|+++++||.... .+|+|++|||+.+++++|.+++||+||||++
T Consensus 321 l~~g~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~ 400 (503)
T PLN02467 321 IKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLC 400 (503)
T ss_pred cCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHhhCCCCCceEE
Confidence 99999999999999999999999999999999999999999997532 3689999999999999999999999999999
Q ss_pred EEEeC
Q 012802 452 ILKYK 456 (456)
Q Consensus 452 v~~~~ 456 (456)
|++|+
T Consensus 401 v~~~~ 405 (503)
T PLN02467 401 VKTFS 405 (503)
T ss_pred EEeeC
Confidence 99986
|
|
| >cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-82 Score=659.58 Aligned_cols=386 Identities=45% Similarity=0.801 Sum_probs=364.9
Q ss_pred CceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHH
Q 012802 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (456)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ 146 (456)
++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++||. .|+.++.++|.++|+++++.|++++++
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~ 79 (475)
T cd07117 2 GLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFK--TWRKTTVAERANILNKIADIIDENKEL 79 (475)
T ss_pred CceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHH
Confidence 579999999876778999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhh
Q 012802 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 226 (456)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 226 (456)
|++++++|+|||+.+++..|+..+++.++||+.++.+..+...+...+...+++++|+|||++|+|||||+...++++++
T Consensus 80 la~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~ 159 (475)
T cd07117 80 LAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSANMIDEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAP 159 (475)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceeEEEEeecceEEEECCCccHHHHHHHHHHH
Confidence 99999999999999987679999999999999888766654433333445788999999999999999999999999999
Q ss_pred hhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCC
Q 012802 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306 (456)
Q Consensus 227 ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~ 306 (456)
||++||+||+|||+.+|+++..+++++.++ +|+|++|+|+|++.+.+..|+.|+++|.|+||||+.+|+.|++.+++ +
T Consensus 160 AL~aGN~VvlKPs~~~p~~~~~l~~~~~~~-lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~ 237 (475)
T cd07117 160 ALAAGNTVVIKPSSTTSLSLLELAKIIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAK-K 237 (475)
T ss_pred HHHcCCEEEEECCccCcHHHHHHHHHHHHh-CCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-c
Confidence 999999999999999999999999999985 99999999999777889999999999999999999999999999887 8
Q ss_pred CCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCcc
Q 012802 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQ 386 (456)
Q Consensus 307 ~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~ 386 (456)
++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.+++.++++|+|.++++++
T Consensus 238 ~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~ 317 (475)
T cd07117 238 LIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLDPDTQM 317 (475)
T ss_pred CCcEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 387 GPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 387 Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
||++++.+++++.++|++++++|+++++||.... ++|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 318 gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~ 391 (475)
T cd07117 318 GAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFK 391 (475)
T ss_pred cCcCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEEC
Confidence 9999999999999999999999999999997632 368999999999999999999999999999999996
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. |
| >cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-82 Score=661.32 Aligned_cols=386 Identities=46% Similarity=0.794 Sum_probs=367.0
Q ss_pred CceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHH
Q 012802 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (456)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ 146 (456)
++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++||+ .|+.++.++|.++|+++++.|++++++
T Consensus 2 ~~~I~g~~~~~~~~~~~~v~~P~t~~~~~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~ 79 (480)
T cd07559 2 DNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFK--TWGKTSVAERANILNKIADRIEENLEL 79 (480)
T ss_pred CccCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 579999999877778999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhh
Q 012802 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 226 (456)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 226 (456)
|++++++|+|||+.++...|+..+++.++|++++.+...+...+...+...++.++|+|||++|+|||||+...++++++
T Consensus 80 la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~ 159 (480)
T cd07559 80 LAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSLSEIDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAP 159 (480)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHHHHH
Confidence 99999999999999987679999999999999988877665444444566788999999999999999999999999999
Q ss_pred hhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCC
Q 012802 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306 (456)
Q Consensus 227 ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~ 306 (456)
||++||+||+|||+.+|+++..+++++.++ +|+|++|+++|++.+.+..|+.|++|++|+||||+.+|+.|++.+++ +
T Consensus 160 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~-~ 237 (480)
T cd07559 160 ALAAGNTVVLKPASQTPLSILVLMELIGDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAE-N 237 (480)
T ss_pred HHHcCCEEEEECchhhhHHHHHHHHHHHHh-CCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-c
Confidence 999999999999999999999999999996 99999999999777889999999999999999999999999999987 8
Q ss_pred CCcEEEecCCCCceEeccCC-----CHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCC
Q 012802 307 LKPVTLELGGKSPFIVCEDA-----DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381 (456)
Q Consensus 307 ~~pv~lelgG~~~~iV~~da-----D~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~ 381 (456)
++|+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|++
T Consensus 238 ~~p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~ 317 (480)
T cd07559 238 LIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEAIKVGNPLD 317 (480)
T ss_pred CCcEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 382 ~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++++||++++.+++++.++|++++++|+++++||.... .+|+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 318 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~ 396 (480)
T cd07559 318 PETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFK 396 (480)
T ss_pred CCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEEEeeC
Confidence 999999999999999999999999999999999997642 469999999999999999999999999999999986
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. |
| >cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-81 Score=656.97 Aligned_cols=390 Identities=54% Similarity=0.936 Sum_probs=366.8
Q ss_pred cCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCC-CCCHHHHHHHHHHHHHHHHhcH
Q 012802 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP-RMTAYERSKIILRFADLLERHN 144 (456)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~-~~~~~~R~~~L~~~a~~l~~~~ 144 (456)
.++||||+|+.+.++.++.++||.||+++++++.++.+|++++++.|++||.. .|+ .++.++|.++|+++++.|++++
T Consensus 7 ~~~~I~G~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~-~W~~~~~~~~R~~~L~~~a~~l~~~~ 85 (481)
T cd07143 7 TGLFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFET-DWGLKVSGSKRGRCLSKLADLMERNL 85 (481)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhhhh-hhcccCCHHHHHHHHHHHHHHHHHhH
Confidence 46899999998766788999999999999999999999999999999999972 499 9999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHH
Q 012802 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (456)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 224 (456)
++|++++++|+|||+.+....|+..+++.++|++.++++..+...+...+...++.++|+|||++|+|||||+...++++
T Consensus 86 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~ 165 (481)
T cd07143 86 DYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQVIETDIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKI 165 (481)
T ss_pred HHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEecceeEEEECCCcChHHHHHHHH
Confidence 99999999999999876655699999999999999998776654433334567789999999999999999999999999
Q ss_pred hhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhh
Q 012802 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304 (456)
Q Consensus 225 ~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~ 304 (456)
++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+|+|++.+.+..|..|+++|.|+||||+.+|+.|++.++.
T Consensus 166 ~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~~~aa~ 245 (481)
T cd07143 166 APALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAK 245 (481)
T ss_pred HHHHHcCCEEEEeCCCCCcHHHHHHHHHHHhcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999777889999999999999999999999999999885
Q ss_pred CCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCC
Q 012802 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384 (456)
Q Consensus 305 ~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 384 (456)
.+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|.++++
T Consensus 246 ~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 325 (481)
T cd07143 246 SNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDPFAEDT 325 (481)
T ss_pred hcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 385 ~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++||++++.+++++.++|++++.+|+++++||....++|+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 326 ~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~ 397 (481)
T cd07143 326 FQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFK 397 (481)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeC
Confidence 999999999999999999999999999999998755578999999999999999999999999999999985
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. |
| >TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-81 Score=658.08 Aligned_cols=385 Identities=39% Similarity=0.677 Sum_probs=361.2
Q ss_pred CceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCC-CCCCCHHHHHHHHHHHHHHHHhcHH
Q 012802 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP-WPRMTAYERSKIILRFADLLERHND 145 (456)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~-W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (456)
++||||+|+. ++++++++||+||+++++++.++.+|++++++.|++||. . |+++|.++|.++|+++++.|+++.+
T Consensus 2 ~~~i~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~~w~~~~~~~R~~~L~~~a~~l~~~~~ 77 (481)
T TIGR03216 2 RNFINGAFVE--SGKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAALK--GPWGKMTVAERADLLYAVADEIERRFD 77 (481)
T ss_pred CceECCEEec--CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhH--hhHhhCCHHHHHHHHHHHHHHHHHhHH
Confidence 5799999986 568899999999999999999999999999999999998 7 9999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCC----CCCceEEEEEccceEEEEEcCcChhHHHHH
Q 012802 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA----DGPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221 (456)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 221 (456)
+|++++++|+|||..++...|+..+++.++|++...+...+...+. ..+...+.+++|+|||++|+|||||+...+
T Consensus 78 ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~ 157 (481)
T TIGR03216 78 DFLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMT 157 (481)
T ss_pred HHHHHHHHHcCCcHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHH
Confidence 9999999999999988866699999999999999887665543321 113456788999999999999999999999
Q ss_pred HHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCch-HHHHHHHcCCCccEEEEeCChHHHHHHHH
Q 012802 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGP-TAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (456)
Q Consensus 222 ~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~-~~~~~L~~~~~v~~V~ftGS~~~g~~i~~ 300 (456)
+++++||++||+||+|||+.+|+++.+++++|.++|+|+|++|+++|++. +.+..|..|++||.|+||||+.+|+.|++
T Consensus 158 ~~~~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~i~~ 237 (481)
T TIGR03216 158 WKVGPALACGNTVVVKPSEETPGTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMK 237 (481)
T ss_pred HHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998654 57899999999999999999999999999
Q ss_pred HHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCC
Q 012802 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380 (456)
Q Consensus 301 ~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~ 380 (456)
.+++ +++|+++|+||+||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|.
T Consensus 238 ~aa~-~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~ 316 (481)
T TIGR03216 238 AAAD-GVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAESLKIGVPD 316 (481)
T ss_pred HHhc-CCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 9987 889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccC-----CCCceEecEEEeeCCCCCcccccccccceeEEEEe
Q 012802 381 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 455 (456)
Q Consensus 381 ~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-----~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~ 455 (456)
++++++||++++.+++++.++|++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|
T Consensus 317 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~~~ 396 (481)
T TIGR03216 317 DPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPF 396 (481)
T ss_pred CCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEEEe
Confidence 9999999999999999999999999999999999997532 36999999999999999999999999999999999
Q ss_pred C
Q 012802 456 K 456 (456)
Q Consensus 456 ~ 456 (456)
+
T Consensus 397 ~ 397 (481)
T TIGR03216 397 D 397 (481)
T ss_pred C
Confidence 6
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation. |
| >cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-81 Score=661.49 Aligned_cols=386 Identities=30% Similarity=0.437 Sum_probs=360.9
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHh-
Q 012802 65 YTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER- 142 (456)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~- 142 (456)
..++||||+|+.+ +++++++||+| |+++++++.++.+|++++++.|++||. .|++++..+|.++|+++++.|++
T Consensus 32 ~~~~~i~G~~~~~--~~~~~v~~P~~tg~~l~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~ 107 (522)
T cd07123 32 EIPLVIGGKEVRT--GNTGKQVMPHDHAHVLATYHYADAALVEKAIEAALEARK--EWARMPFEDRAAIFLKAADLLSGK 107 (522)
T ss_pred ccCeeECCEEcCC--CCeEEEECCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhh
Confidence 4678999999863 57899999995 999999999999999999999999999 99999999999999999999996
Q ss_pred cHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCC-CCCceEEEEEccc-eEEEEEcCcChhHHHH
Q 012802 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPI-GVAGQIIPWNFPLLMF 220 (456)
Q Consensus 143 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~-GVv~~i~p~n~P~~~~ 220 (456)
++++|+.++++|+|||+.++...|+..+++.++|++.+++++.+...+. ..+...++.++|+ |||++|+|||||+...
T Consensus 108 ~~~ela~~~~~e~Gk~~~~a~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwNfP~~~~ 187 (522)
T cd07123 108 YRYELNAATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEELYAQQPLSSPAGVWNRLEYRPLEGFVYAVSPFNFTAIGG 187 (522)
T ss_pred CHHHHHHHHHHhcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCceEEEECCcccHHHHH
Confidence 8999999999999999988765688899999999999888775543322 2245678899998 9999999999999999
Q ss_pred HHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHH
Q 012802 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (456)
Q Consensus 221 ~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~ 300 (456)
.+++++|| +||+||+|||+.+|+++..++++|.++|+|+|++|+++|++.+.+..|+.|++|++|+||||+++|+.|++
T Consensus 188 ~~~~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~~i~~ 266 (522)
T cd07123 188 NLAGAPAL-MGNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWK 266 (522)
T ss_pred HHHHHHHH-hCCEEEEECCCCCCHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHHHHHH
Confidence 99999999 69999999999999999999999999999999999999977778999999999999999999999999999
Q ss_pred HHhhCCCC------cEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhc
Q 012802 301 LAAKSNLK------PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 374 (456)
Q Consensus 301 ~aa~~~~~------pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~ 374 (456)
.++. +++ ++++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++
T Consensus 267 ~aa~-~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l 345 (522)
T cd07123 267 QIGE-NLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEELKEI 345 (522)
T ss_pred HHHh-hcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhC
Confidence 9987 666 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhC-CCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEE
Q 012802 375 VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG-GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSIL 453 (456)
Q Consensus 375 ~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~-Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~ 453 (456)
++|+|+|+++++||++++.+++++.++|++++++ |+++++||....++|+|++||||.+++++|++++||+||||++|+
T Consensus 346 ~~G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~V~ 425 (522)
T cd07123 346 KMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGPVLTVY 425 (522)
T ss_pred ccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcCCCCCceEcCEEEeCCCCCChhhhcCCCCCeEEEE
Confidence 9999999999999999999999999999999999 999999997644468999999999999999999999999999999
Q ss_pred EeC
Q 012802 454 KYK 456 (456)
Q Consensus 454 ~~~ 456 (456)
+|+
T Consensus 426 ~~~ 428 (522)
T cd07123 426 VYP 428 (522)
T ss_pred EeC
Confidence 985
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. |
| >TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-81 Score=660.40 Aligned_cols=388 Identities=31% Similarity=0.439 Sum_probs=362.3
Q ss_pred CccCceecCEeeeCCCCCeeeeecCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH-
Q 012802 64 DYTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE- 141 (456)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~- 141 (456)
...++||||+|+.+ ++.+++++||.| |+++++++.++.+|++++++.|++||+ .|+.++..+|.++|+++++.|+
T Consensus 30 ~~~~~~i~G~~~~~-~~~~~~~~nP~t~g~~i~~~~~~~~~~v~~av~~A~~a~~--~W~~~~~~~R~~~L~k~a~~l~~ 106 (533)
T TIGR01236 30 IEIPLVIGGEEVMG-SGERIDQVQPHNHQAVLAKATNATEEDAAKAVEAALDAKK--DWSALPFYDRAAIFLKAADLLSG 106 (533)
T ss_pred eeeceeECCEEecC-CCCEEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHh
Confidence 45689999999974 557899999997 899999999999999999999999999 9999999999999999999999
Q ss_pred hcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCccc-CCCCCceEEEEEccc-eEEEEEcCcChhHHH
Q 012802 142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA-PADGPYHVQTLHEPI-GVAGQIIPWNFPLLM 219 (456)
Q Consensus 142 ~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~-~~~~~~~~~~~~~P~-GVv~~i~p~n~P~~~ 219 (456)
+++++|++++++|+|||+.+++..++..+++.++|++.+++++.+... ....+..+++.++|+ |||++|+|||||+..
T Consensus 107 ~~~~~la~~~~~e~GK~~~~a~~e~v~~~i~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~ 186 (533)
T TIGR01236 107 PYREEILAATMLGQSKNVYQAEIDAVAELIDFFRFNVKYARELYEQQPSESAPGEWNRTDYRPLEGFVYAISPFNFTAIA 186 (533)
T ss_pred hcHHHHHHHHHHHcCCcHHHHhHhHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCCEEEEEeCCchHHHH
Confidence 599999999999999999998754499999999999998887765433 222355678899999 999999999999999
Q ss_pred HHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHH
Q 012802 220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299 (456)
Q Consensus 220 ~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~ 299 (456)
..+++++|| +||+||+|||+.+|+++..++++|.++|+|+|++|+|+|++.+.+..|+.|++|++|+||||+++|+.|+
T Consensus 187 ~~~~~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~G~~i~ 265 (533)
T TIGR01236 187 GNLPGAPAL-MGNTVIWKPSITATLSNYLTMRILEEAGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTATFKHLW 265 (533)
T ss_pred HHHHHHHHH-hCCeEEEECCCcCCHHHHHHHHHHHhcCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 999999999 7999999999999999999999999999999999999997778899999999999999999999999999
Q ss_pred HHHhhCCCC------cEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhh
Q 012802 300 QLAAKSNLK------PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK 373 (456)
Q Consensus 300 ~~aa~~~~~------pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~ 373 (456)
+.+++ +++ ++++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++
T Consensus 266 ~~aa~-~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~ 344 (533)
T TIGR01236 266 KWVAS-NLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLYVPHSVWPRFKDELLAELAE 344 (533)
T ss_pred HHHHh-hccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEEchhHHHHHHHHHHHHHhc
Confidence 99987 666 49999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhCC--CEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeE
Q 012802 374 RVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG--AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQS 451 (456)
Q Consensus 374 ~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~G--a~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~ 451 (456)
+++|+|.|+++++||+++..+++++.++|++++++| +++++||.....+|+|++||||.+++++|++++||+||||++
T Consensus 345 l~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~~~~G~~~~PTvl~~~~~d~~i~~eE~FGPVl~ 424 (533)
T TIGR01236 345 VKVGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYDDSEGYFVEPTVILSKDPTDPLMVEEIFGPVLT 424 (533)
T ss_pred CCcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcccCCCCeEE
Confidence 999999999999999999999999999999999987 799999976444689999999999999999999999999999
Q ss_pred EEEeC
Q 012802 452 ILKYK 456 (456)
Q Consensus 452 v~~~~ 456 (456)
|++|+
T Consensus 425 v~~~~ 429 (533)
T TIGR01236 425 VYVYP 429 (533)
T ss_pred EEEeC
Confidence 99996
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate. |
| >cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-81 Score=654.92 Aligned_cols=391 Identities=65% Similarity=1.076 Sum_probs=368.1
Q ss_pred cCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHH
Q 012802 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (456)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (456)
.++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++||....|+.++.++|.++|+++++.|+++++
T Consensus 4 ~~~~I~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 83 (476)
T cd07091 4 TGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLADLIERDRD 83 (476)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 47899999997767788999999999999999999999999999999999982225599999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHh
Q 012802 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225 (456)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 225 (456)
+|++++++|+|||+.++...|+..+++.++|++++.++..+...+...+...++.++|+|||++|+|||||+...+++++
T Consensus 84 ~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~ 163 (476)
T cd07091 84 ELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKTIPIDGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLA 163 (476)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEeceeEEEEECCCcCHHHHHHHHHH
Confidence 99999999999998776667999999999999999887766554433456678999999999999999999999999999
Q ss_pred hhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhC
Q 012802 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305 (456)
Q Consensus 226 ~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~ 305 (456)
+||++||+||+|||+.+|.++..++++|.++|+|+|++|+|++++.+.+..|..|+++|.|+||||+.+|+.|++.++.+
T Consensus 164 ~AL~aGN~VvlKps~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~~~aa~~ 243 (476)
T cd07091 164 PALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAKS 243 (476)
T ss_pred HHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999997778889999999999999999999999999998865
Q ss_pred CCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCc
Q 012802 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 385 (456)
Q Consensus 306 ~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~ 385 (456)
+++|+++|+|||||+||++|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|++++++
T Consensus 244 ~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~~~ 323 (476)
T cd07091 244 NLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVGDPFDPDTF 323 (476)
T ss_pred CCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCCc
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 386 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 386 ~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+||++++.+++++.++|++++++|+++++||....+.|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 324 ~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~ 394 (476)
T cd07091 324 QGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFK 394 (476)
T ss_pred CCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECcEEecCCCCCChhhhCCCCCCeEEEeecC
Confidence 99999999999999999999999999999998755678999999999999999999999999999999986
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co |
| >TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-81 Score=656.09 Aligned_cols=385 Identities=43% Similarity=0.754 Sum_probs=363.1
Q ss_pred CceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHH
Q 012802 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (456)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ 146 (456)
++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++||. .|+.++.++|.++|+++++.|++++++
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~~ 79 (488)
T TIGR02299 2 GHFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFK--RWAELKAAERKRYLHKIADLIEQHADE 79 (488)
T ss_pred CccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 569999999876678899999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHh-hcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHh
Q 012802 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK-IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225 (456)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~-~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 225 (456)
|++++++|+|||+.+++ .|+..+++.++|+++..++ ..+...+.. ....+.+++|+|||++|+|||||+...+++++
T Consensus 80 l~~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~ 157 (488)
T TIGR02299 80 IAVLECLDCGQPLRQTR-QQVIRAAENFRFFADKCEEAMDGRTYPVD-THLNYTVRVPVGPVGLITPWNAPFMLSTWKIA 157 (488)
T ss_pred HHHHHHHHcCCcHHHHH-HHHHHHHHHHHHHHHhHHHhcCCccccCC-CceEEEEEEecceEEEECCCccHHHHHHHHHH
Confidence 99999999999999988 5999999999999988773 344433332 34568899999999999999999999999999
Q ss_pred hhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhC
Q 012802 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305 (456)
Q Consensus 226 ~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~ 305 (456)
+||++||+||+|||+.+|+++..++++|.++|+|+|++|++++++.+.+..|..|++||.|+||||+.+|+.|++.++.
T Consensus 158 ~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~aa~- 236 (488)
T TIGR02299 158 PALAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGAD- 236 (488)
T ss_pred HHHHcCCEEEEECchhchHHHHHHHHHHHHcCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh-
Confidence 9999999999999999999999999999999999999999998777788899999999999999999999999999987
Q ss_pred CCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCc
Q 012802 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 385 (456)
Q Consensus 306 ~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~ 385 (456)
+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.+++++
T Consensus 237 ~l~~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~~~ 316 (488)
T TIGR02299 237 TLKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLDPETE 316 (488)
T ss_pred cCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCCcCCCCCCCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccC-------CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 386 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-------AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 386 ~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-------~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+||++++.+++++.++|++++++|+++++||.... .+|+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 317 ~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~ 394 (488)
T TIGR02299 317 VGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFK 394 (488)
T ss_pred CCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEeeC
Confidence 99999999999999999999999999999997532 258999999999999999999999999999999986
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. |
| >cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-81 Score=652.12 Aligned_cols=385 Identities=35% Similarity=0.538 Sum_probs=362.7
Q ss_pred CceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHH
Q 012802 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (456)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ 146 (456)
++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++|++ .|+.++.++|.++|+++++.|++++++
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e 79 (478)
T cd07085 2 KLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFP--AWSATPVLKRQQVMFKFRQLLEENLDE 79 (478)
T ss_pred CceECCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 579999999876678899999999999999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCC-CCCceEEEEEccceEEEEEcCcChhHHHHHHHHh
Q 012802 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225 (456)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 225 (456)
|++++++|+|||+.+++ .|+..+++.++|++...+...+...+. ..+...+..++|+|||++|+|||||+...+++++
T Consensus 80 l~~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~ 158 (478)
T cd07085 80 LARLITLEHGKTLADAR-GDVLRGLEVVEFACSIPHLLKGEYLENVARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFP 158 (478)
T ss_pred HHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhCCeecccCCCCceeEEEEecceEEEEECCCChHHHHHHHHHH
Confidence 99999999999999987 499999999999998777666654432 2245678999999999999999999999999999
Q ss_pred hhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhC
Q 012802 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305 (456)
Q Consensus 226 ~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~ 305 (456)
+||++||+||+|||+.+|+++..++++|.++|+|+|++|+++++ .+.+..|+.|++|+.|+||||+.+|+.|++.+++
T Consensus 159 ~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aGlP~gvv~~v~g~-~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~- 236 (478)
T cd07085 159 MAIACGNTFVLKPSERVPGAAMRLAELLQEAGLPDGVLNVVHGG-KEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAA- 236 (478)
T ss_pred HHHhcCCEEEEECCCcCcHHHHHHHHHHHHhCCCCCcEEEEecC-HHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhh-
Confidence 99999999999999999999999999999999999999999984 5678899999999999999999999999999887
Q ss_pred CCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCc
Q 012802 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 385 (456)
Q Consensus 306 ~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~ 385 (456)
+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+++++
T Consensus 237 ~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~ 316 (478)
T cd07085 237 NGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDDPGAD 316 (478)
T ss_pred cCCcEEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCC
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 386 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 386 ~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+||++++.+++++.++|++++++|+++++||.... .+|+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 317 ~gpli~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~ 391 (478)
T cd07085 317 MGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVD 391 (478)
T ss_pred cCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeC
Confidence 99999999999999999999999999999997531 469999999999999999999999999999999986
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. |
| >cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-81 Score=651.16 Aligned_cols=385 Identities=43% Similarity=0.709 Sum_probs=362.7
Q ss_pred cCceecCEeeeCCCCCeeeeecCC-CCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 012802 66 TQLLINGQFVDSASGKTFPTLDPR-TGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (456)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~-tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (456)
+++||||+|+.+. ..++++||. ||+++++++.++.+|++++++.|++||+ .|+.++.++|.++|+++++.|++++
T Consensus 1 ~~~~i~g~~~~~~--~~~~v~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~ 76 (473)
T cd07097 1 YRNYIDGEWVAGG--DGEENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFP--AWRRTSPEARADILDKAGDELEARK 76 (473)
T ss_pred CCceECCEEecCC--CCceeECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhH
Confidence 3679999999753 347999999 5999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCC-CCCceEEEEEccceEEEEEcCcChhHHHHHHH
Q 012802 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (456)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (456)
++|++++++|+|||+.+++. |+..+++.++||+...++..+...+. ..+...++.++|+|||++|+|||||+...+++
T Consensus 77 ~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~ 155 (473)
T cd07097 77 EELARLLTREEGKTLPEARG-EVTRAGQIFRYYAGEALRLSGETLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWK 155 (473)
T ss_pred HHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEEeeeeEEEEcccChHHHHHHHH
Confidence 99999999999999999875 99999999999999888776654332 23456789999999999999999999999999
Q ss_pred HhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHh
Q 012802 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (456)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa 303 (456)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.+++..|+.|++|++|.||||+.+|+.|++.++
T Consensus 156 i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa 235 (473)
T cd07097 156 IAPALAYGNTVVFKPAELTPASAWALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAA 235 (473)
T ss_pred HHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999977778999999999999999999999999999998
Q ss_pred hCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCC
Q 012802 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (456)
Q Consensus 304 ~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 383 (456)
+ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.+++
T Consensus 236 ~-~~~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 314 (473)
T cd07097 236 A-RGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDALDEG 314 (473)
T ss_pred c-cCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccC--CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 384 ~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++||++++.+++++.++|++++++|+++++||.... ++|+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 315 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~ 389 (473)
T cd07097 315 VDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVR 389 (473)
T ss_pred CcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccC
Confidence 9999999999999999999999999999999997543 368999999999999999999999999999999985
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. |
| >cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-80 Score=651.88 Aligned_cols=386 Identities=45% Similarity=0.787 Sum_probs=364.7
Q ss_pred eecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 012802 69 LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIA 148 (456)
Q Consensus 69 ~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la 148 (456)
||||+|+...++.+++++||+||+++++++.++.+|++++++.|++||+.+.|+.++..+|.++|+++++.|++++++|+
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 80 (482)
T cd07119 1 YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELA 80 (482)
T ss_pred CCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 69999987666788999999999999999999999999999999999974469999999999999999999999999999
Q ss_pred HHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhh
Q 012802 149 ALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 228 (456)
Q Consensus 149 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL 228 (456)
+++++|+|||..+++. |+..+++.++|++.+.++..+...+...+...+++++|+|||++|+|||||+...++++++||
T Consensus 81 ~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~AL 159 (482)
T cd07119 81 RLETLNTGKTLRESEI-DIDDVANCFRYYAGLATKETGEVYDVPPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPAL 159 (482)
T ss_pred HHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEeeeeeEEEEcCCchHHHHHHHHHHHHH
Confidence 9999999999999875 999999999999999887665544433455678999999999999999999999999999999
Q ss_pred hcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCC
Q 012802 229 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLK 308 (456)
Q Consensus 229 aaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~ 308 (456)
++||+||+|||+.+|+++..++++|.++|+|+|++|+|++++.+.+..|+.|+++|+|+||||+.+|+.|++.+++ +++
T Consensus 160 aaGN~VilKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~-~~~ 238 (482)
T cd07119 160 AAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAG-NVK 238 (482)
T ss_pred hcCCEEEEECCccccHHHHHHHHHHHHcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCC
Confidence 9999999999999999999999999999999999999998777789999999999999999999999999999887 889
Q ss_pred cEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCcccc
Q 012802 309 PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGP 388 (456)
Q Consensus 309 pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp 388 (456)
|+++|+|||||+||++|||+|.|++.+++++|.|+||.|+++++||||+++||+|+++|++++.++++|+|.++++++||
T Consensus 239 ~~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~gp 318 (482)
T cd07119 239 KVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNGLDADTEMGP 318 (482)
T ss_pred cEEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhhCCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 389 QIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 389 ~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 319 li~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~ 390 (482)
T cd07119 319 LVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFD 390 (482)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccC
Confidence 99999999999999999999999999997532 268999999999999999999999999999999986
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. |
| >cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-80 Score=650.63 Aligned_cols=388 Identities=53% Similarity=0.895 Sum_probs=365.1
Q ss_pred cCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCC-CCCCCHHHHHHHHHHHHHHHHhcH
Q 012802 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP-WPRMTAYERSKIILRFADLLERHN 144 (456)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~-W~~~~~~~R~~~L~~~a~~l~~~~ 144 (456)
.++||||+|+.+.++.+++++||+||+++++++.++.+|++++++.|++||. . |+.++.++|.++|+++++.|++++
T Consensus 8 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~ai~~A~~A~~--~~w~~~~~~~R~~iL~~~a~~l~~~~ 85 (484)
T cd07144 8 TGLFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFE--SWWSKVTGEERGELLDKLADLVEKNR 85 (484)
T ss_pred cCcEECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hhHhcCCHHHHHHHHHHHHHHHHHhH
Confidence 4689999999876678899999999999999999999999999999999998 5 889999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHH
Q 012802 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (456)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 224 (456)
++|++++++|+|||..++...|+..+++.++|++++.++..+...+...+...+..++|+|||++|+|||||+...++++
T Consensus 86 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~ 165 (484)
T cd07144 86 DLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTIPTSPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKL 165 (484)
T ss_pred HHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEEecceEEEEECcCCCHHHHHHHHH
Confidence 99999999999999877655699999999999999988886655443334556889999999999999999999999999
Q ss_pred hhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhh
Q 012802 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304 (456)
Q Consensus 225 ~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~ 304 (456)
++||++||+||+|||+.+|+++..+.++|.++|+|+|++|+|+|++.+.+..|..|+++|.|.||||+.+|+.|++.++.
T Consensus 166 ~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~a~~ 245 (484)
T cd07144 166 APALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAAQ 245 (484)
T ss_pred HHHHHcCCEEEEECCccchHHHHHHHHHHHHhCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999777889999999999999999999999999999887
Q ss_pred CCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhh-cccCCCCCCC
Q 012802 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK-RVVGDPFKGG 383 (456)
Q Consensus 305 ~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~-~~~G~p~~~~ 383 (456)
+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++.+ +++|+|++++
T Consensus 246 -~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~G~p~~~~ 324 (484)
T cd07144 246 -NLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSPFDDD 324 (484)
T ss_pred -cCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhhCCcCCCCCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999985 8999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccC---CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 384 ~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~---~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++||+++..+++++.++|++++++|+++++||.... ++|+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 325 ~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~ 400 (484)
T cd07144 325 TVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFK 400 (484)
T ss_pred CcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcccCCCCceECCEEEeCCCCCCchhhCCCCCceEEEeccC
Confidence 9999999999999999999999999999999997643 368999999999999999999999999999999985
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. |
| >PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-80 Score=649.19 Aligned_cols=384 Identities=32% Similarity=0.474 Sum_probs=358.4
Q ss_pred CceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHH
Q 012802 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (456)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ 146 (456)
.+||||+|+.+ ++++++++||+||+++++++.++.++++++++.|++||+ .|++++..+|.++|+++++.|+++.++
T Consensus 2 ~~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~a~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e 78 (487)
T PRK09457 2 TLWINGDWIAG-QGEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFP--AWARLSFEERQAIVERFAALLEENKEE 78 (487)
T ss_pred CceECCEEecC-CCCEEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHhHHHH
Confidence 47999999875 457899999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhh
Q 012802 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 226 (456)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 226 (456)
|++++++|+|||+.+++ .|+..+++.++|++.+..+..+.......+...+++++|+|||++|+|||||+...++++++
T Consensus 79 la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 157 (487)
T PRK09457 79 LAEVIARETGKPLWEAA-TEVTAMINKIAISIQAYHERTGEKRSEMADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVP 157 (487)
T ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCceeccCCCceeEEEEeccEEEEEECCCchHHHHHHHHHHH
Confidence 99999999999999987 49999999999999877665554333223445688999999999999999999999999999
Q ss_pred hhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCC
Q 012802 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306 (456)
Q Consensus 227 ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~ 306 (456)
||++||+||+|||+.+|+++..+++++.++|+|+|++|+|++ +.+.+..|..|++||.|+||||+++|+.|++.++.+.
T Consensus 158 ALaaGN~VvlKPs~~tp~t~~~l~~l~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~ 236 (487)
T PRK09457 158 ALLAGNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQP 236 (487)
T ss_pred HHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcC
Confidence 999999999999999999999999999999999999999998 5678999999999999999999999999999887645
Q ss_pred CCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchH-HHHHHHHHHHhhhcccCCCC-CCCC
Q 012802 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY-DQFVEKANALAMKRVVGDPF-KGGI 384 (456)
Q Consensus 307 ~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-d~f~~~l~~~~~~~~~G~p~-~~~~ 384 (456)
.+++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++| |+|+++|+++++++++|||+ ++.+
T Consensus 237 ~~~~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~vG~p~~~~~~ 316 (487)
T PRK09457 237 EKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRWDAEPQP 316 (487)
T ss_pred CCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHHHHHHHHHHHHhcCcCCCCCcCCCC
Confidence 688999999999999999999999999999999999999999999999999998 99999999999999999996 7889
Q ss_pred ccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 385 ~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++||+++..+++++.++|++++++|+++++||...+++|+|++|||+ +++++|++++||+||||++|++|+
T Consensus 317 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl-~v~~~~~i~~eE~FGPVl~V~~~~ 387 (487)
T PRK09457 317 FMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTGLLTPGII-DVTGVAELPDEEYFGPLLQVVRYD 387 (487)
T ss_pred ccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccCCCCeeEecEEe-ccCCCChHHhCCCcCCeEEEEEeC
Confidence 99999999999999999999999999999988654456899999999 799999999999999999999996
|
|
| >PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-80 Score=648.57 Aligned_cols=389 Identities=41% Similarity=0.717 Sum_probs=365.7
Q ss_pred cCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHH
Q 012802 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (456)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (456)
+++||||+|+...++++++++||+||+++++++.++.+|++++++.|++||+.+.|+.+|.++|.++|+++++.|+++++
T Consensus 20 ~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~v~~~~~~dv~~av~aA~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 99 (494)
T PRK09847 20 NRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAE 99 (494)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 46899999998767788999999999999999999999999999999999974469999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHh
Q 012802 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225 (456)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 225 (456)
+|++++++|+|||+.++...|+..+++.++|++++.++..+...+...+...++.++|+|||++|+|||||+...+++++
T Consensus 100 ela~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 179 (494)
T PRK09847 100 ELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLG 179 (494)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEecceeEEEEECCCccHHHHHHHHHH
Confidence 99999999999999887656999999999999999888766554433344568899999999999999999999999999
Q ss_pred hhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhC
Q 012802 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305 (456)
Q Consensus 226 ~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~ 305 (456)
+||++||+||+|||+.+|.++..+++++.++|+|+|++|++++++.+.+..|+.|+++|.|+||||+.+|+.|.+.++..
T Consensus 180 ~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~v~~~aa~~ 259 (494)
T PRK09847 180 PALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDS 259 (494)
T ss_pred HHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999997778899999999999999999999999999998844
Q ss_pred CCCcEEEecCCCCceEeccCC-CHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCC
Q 012802 306 NLKPVTLELGGKSPFIVCEDA-DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384 (456)
Q Consensus 306 ~~~pv~lelgG~~~~iV~~da-D~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 384 (456)
+++|+++|+||+||+||.+|+ |+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++
T Consensus 260 ~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 339 (494)
T PRK09847 260 NMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHPLDPAT 339 (494)
T ss_pred CCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 789999999999999999997 9999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 385 ~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++||++++.+++++.++|++++++| ++++||... ..++|++|||+.+++++|++++||+||||++|++|+
T Consensus 340 ~~gpli~~~~~~~v~~~v~~a~~~G-~i~~gg~~~-~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~ 409 (494)
T PRK09847 340 TMGTLIDCAHADSVHSFIREGESKG-QLLLDGRNA-GLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFT 409 (494)
T ss_pred cCCCCcCHHHHHHHHHHHHHHHHCC-eEEECCccC-CCCceEeeEEEeCCCCCChHHhCcCcCceEEEEecC
Confidence 9999999999999999999999999 999998753 357899999999999999999999999999999986
|
|
| >PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-80 Score=648.76 Aligned_cols=386 Identities=41% Similarity=0.701 Sum_probs=363.9
Q ss_pred cCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHH
Q 012802 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (456)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (456)
.++||||+|+.+ ++++++++||+||+++++++.++.+|++++++.|++||+ .|+.++.++|.++|+++++.|+++++
T Consensus 3 ~~~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 79 (475)
T PRK13473 3 TKLLINGELVAG-EGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFP--EWSQTTPKERAEALLKLADAIEENAD 79 (475)
T ss_pred ccceECCEEecC-CCCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 468999999875 668899999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccC-CCCCceEEEEEccceEEEEEcCcChhHHHHHHHH
Q 012802 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (456)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 224 (456)
+|++++++|+|||..++...|+..+++.++|+++..+.+.+...+ ...+...+++++|+|||++|+|||||+...++++
T Consensus 80 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~i 159 (475)
T PRK13473 80 EFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKL 159 (475)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceeEEEEccCChHHHHHHHHH
Confidence 999999999999998876569999999999999888877654322 1223456789999999999999999999999999
Q ss_pred hhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhh
Q 012802 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304 (456)
Q Consensus 225 ~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~ 304 (456)
++||++||+||+|||+.+|+++..+++++.++ +|+|++|++++++.+.+..|+.|++||.|+||||+++|+.|++.++.
T Consensus 160 ~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~a-lP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~~~aa~ 238 (475)
T PRK13473 160 APALAAGNTVVLKPSEITPLTALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAAD 238 (475)
T ss_pred HHHHhcCCEEEEECCCCChHHHHHHHHHHHHh-CCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999 99999999999777889999999999999999999999999999887
Q ss_pred CCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCC
Q 012802 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384 (456)
Q Consensus 305 ~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 384 (456)
+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++
T Consensus 239 -~~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~ 317 (475)
T PRK13473 239 -SVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPDDEDT 317 (475)
T ss_pred -cCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCC
Confidence 8899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHHhhCC-CEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 385 QQGPQIDSEQFEKILKYIRSGVDGG-AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 385 ~~Gp~i~~~~~~~~~~~i~~a~~~G-a~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++||++++.+++++.++|++++++| +++++||....+.|+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 318 ~~gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~ 390 (475)
T PRK13473 318 ELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFD 390 (475)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcCCCCceeEcCEEEecCCCCChhhhCCccCCeEEEeccC
Confidence 9999999999999999999999999 99999997654468999999999999999999999999999999985
|
|
| >cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-80 Score=649.19 Aligned_cols=384 Identities=44% Similarity=0.732 Sum_probs=359.9
Q ss_pred CceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHH
Q 012802 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (456)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ 146 (456)
++||||+|+.+.++++++++||.||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|++++++
T Consensus 2 ~~~i~g~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~ 79 (479)
T cd07116 2 DNFIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKE--AWGKTSVAERANILNKIADRMEANLEM 79 (479)
T ss_pred CceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 579999999877778999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhh
Q 012802 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 226 (456)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 226 (456)
|+.++++|+|||+.++...|+..+++.++||++..+...+...+...+...+++++|+|||++|+|||||+.+.++++++
T Consensus 80 la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 159 (479)
T cd07116 80 LAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSISEIDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAP 159 (479)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhHHHcCCeeecCCCCceEEEEEeccceEEEECCCchHHHHHHHHHHH
Confidence 99999999999998877669999999999999988776554433333456788999999999999999999999999999
Q ss_pred hhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCC
Q 012802 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306 (456)
Q Consensus 227 ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~ 306 (456)
||++||+||+|||+.+|+++..+++++.++ +|+|++|+++|.+.+.+..|+.|++||+|+||||+.+|+.|++.+++ +
T Consensus 160 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~a-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~-~ 237 (479)
T cd07116 160 ALAAGNCVVLKPAEQTPASILVLMELIGDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASE-N 237 (479)
T ss_pred HHHcCCEEEEECCCCChHHHHHHHHHHHHH-CCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHc-C
Confidence 999999999999999999999999999998 99999999998777889999999999999999999999999999987 7
Q ss_pred CCcEEEecCCCCceEeccC------CCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCC
Q 012802 307 LKPVTLELGGKSPFIVCED------ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380 (456)
Q Consensus 307 ~~pv~lelgG~~~~iV~~d------aD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~ 380 (456)
++|+++|+|||||+||++| ||+|.|++.++++. +|+||.|++++|||||+++||+|+++|.++++++++|+|+
T Consensus 238 ~~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~ 316 (479)
T cd07116 238 IIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFA-LNQGEVCTCPSRALIQESIYDRFMERALERVKAIKQGNPL 316 (479)
T ss_pred CCeEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 9999999999999999987 79999999999865 5999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 381 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 381 ~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++++++||++++.+++++.++|++++++|+++++||.... .+|+|+.|||+.+++ +|.+++||+||||++|++|+
T Consensus 317 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~-~~~~~~eE~FGPVl~v~~~~ 395 (479)
T cd07116 317 DTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGN-KMRIFQEEIFGPVLAVTTFK 395 (479)
T ss_pred CCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCC-CChhhhcCCcCceEEEEEeC
Confidence 9999999999999999999999999999999999997532 368999999999874 99999999999999999996
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. |
| >TIGR01804 BADH glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-80 Score=647.54 Aligned_cols=385 Identities=43% Similarity=0.755 Sum_probs=364.4
Q ss_pred eecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 012802 69 LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIA 148 (456)
Q Consensus 69 ~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la 148 (456)
||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++||+ .|+.++.++|.++|+++++.|++++++|+
T Consensus 1 ~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la 78 (467)
T TIGR01804 1 FIDGEWVEASAGETREIINPANQEVIATVAEATREDVERAIAAARRAQG--EWASMTPEERGRILRRIAELIRERNEELA 78 (467)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 6999999766678999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhh
Q 012802 149 ALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 228 (456)
Q Consensus 149 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL 228 (456)
+++++|+|||+.++...|+..+++.++|++...++..+...+.......+..++|+|||++|+|||||+...++++++||
T Consensus 79 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL 158 (467)
T TIGR01804 79 KLETLDTGKTLEETSVADMDDIADVFEFFAGLADKDGGEIIPLPIPSFSYTIREPLGVCVGIGAWNYPLQIASWKIAPAL 158 (467)
T ss_pred HHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCCccccCCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHH
Confidence 99999999999998556999999999999998887766544333234568899999999999999999999999999999
Q ss_pred hcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCC
Q 012802 229 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLK 308 (456)
Q Consensus 229 aaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~ 308 (456)
++||+||+|||+.+|.++..++++|.++|+|+|++|++++++.+.+..|..|+++|.|+||||+++|+.|++.+++ ++|
T Consensus 159 aaGN~VvlKps~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~-~l~ 237 (467)
T TIGR01804 159 AAGNAMVFKPSEITPLTALKVAELMEEAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAAAD-HLK 237 (467)
T ss_pred hcCCEEEeeCCccCcHHHHHHHHHHHHcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCC
Confidence 9999999999999999999999999999999999999998777889999999999999999999999999999887 889
Q ss_pred cEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCcccc
Q 012802 309 PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGP 388 (456)
Q Consensus 309 pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp 388 (456)
|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||
T Consensus 238 ~~~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gp 317 (467)
T TIGR01804 238 HVTMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIKEKFEARLVERTKRIKLGDGFDEATEMGP 317 (467)
T ss_pred cEEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhhCCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 389 QIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 389 ~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++++.+++++.++|++++.+|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 318 li~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~ 389 (467)
T TIGR01804 318 LISAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFS 389 (467)
T ss_pred cCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecC
Confidence 99999999999999999999999999997532 358999999999999999999999999999999986
|
Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171). |
| >cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-80 Score=648.59 Aligned_cols=383 Identities=37% Similarity=0.637 Sum_probs=361.5
Q ss_pred ceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHH
Q 012802 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI 147 (456)
Q Consensus 68 ~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~l 147 (456)
+||||+|+.+. +.+++++||+||+++++++.++.+|++++++.|++||. .|+.++.++|.++|+++++.|++++++|
T Consensus 1 ~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el 77 (478)
T cd07086 1 GVIGGEWVGSG-GETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFK--EWRKVPAPRRGEIVRQIGEALRKKKEAL 77 (478)
T ss_pred CcCCCEEecCC-CCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 58999999765 67899999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCC-CCceEEEEEccceEEEEEcCcChhHHHHHHHHhh
Q 012802 148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 226 (456)
Q Consensus 148 a~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 226 (456)
++++++|+|||+.+++. |+..+++.++|++...+++.+...+.. .+...+++++|+|||++|+|||||+...++++++
T Consensus 78 a~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ 156 (478)
T cd07086 78 GRLVSLEMGKILPEGLG-EVQEMIDICDYAVGLSRMLYGLTIPSERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAI 156 (478)
T ss_pred HHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceeEEEECCCCcHHHHHHHHHHH
Confidence 99999999999999874 999999999999998888766544321 2345678999999999999999999999999999
Q ss_pred hhhcCCEEEeecCCCChhHHHHHHHHHHHc----CCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHH
Q 012802 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (456)
Q Consensus 227 ALaaGN~VVlkps~~~p~~~~~l~~~l~~a----GlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~a 302 (456)
||++||+||+|||+.+|+++..+++++.++ |+|+|++|++++++. .+..|..|+++|.|.||||+.+|+.|++.+
T Consensus 157 ALaaGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~-~~~~L~~~~~vd~v~fTGs~~~g~~i~~~a 235 (478)
T cd07086 157 ALVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGD-GGELLVHDPRVPLVSFTGSTEVGRRVGETV 235 (478)
T ss_pred HHHcCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCch-hHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 999999999999999999999999999999 999999999998655 889999999999999999999999999998
Q ss_pred hhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCC
Q 012802 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 382 (456)
Q Consensus 303 a~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~ 382 (456)
++ +++|+++|+|||||+||++|||++.|++.|++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++
T Consensus 236 a~-~~~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~ 314 (478)
T cd07086 236 AR-RFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGDPLDE 314 (478)
T ss_pred hc-cCCcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHHHHHHHHHHHHHHhCCcCCCCCC
Confidence 87 88999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCC--CCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA--KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 383 ~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~--~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++++||++++.+++++.++|++++++|+++++||..... +|+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 315 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~ 390 (478)
T cd07086 315 GTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFD 390 (478)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeC
Confidence 999999999999999999999999999999999976432 68999999999999999999999999999999986
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). |
| >cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-80 Score=651.47 Aligned_cols=385 Identities=39% Similarity=0.604 Sum_probs=364.2
Q ss_pred cCceecCEeeeCCCCCeeeeecCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 012802 66 TQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (456)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (456)
.++||||+|+. ++.+++++||+| |+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|++++
T Consensus 33 ~~~~i~g~~~~--~~~~~~v~~P~t~~~~i~~~~~a~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~ 108 (512)
T cd07124 33 YPLVIGGKEVR--TEEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFP--TWRRTPPEERARLLLRAAALLRRRR 108 (512)
T ss_pred cceeECCEEec--CCCeEEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCH
Confidence 57899999996 356899999998 999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHH
Q 012802 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (456)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 224 (456)
++|++++++|+|||+.+++. |+..+++.++|++.++++..+...+...+...+++++|+|||++|+|||||+.+.++++
T Consensus 109 ~~la~~~~~e~Gk~~~ea~~-ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i 187 (512)
T cd07124 109 FELAAWMVLEVGKNWAEADA-DVAEAIDFLEYYAREMLRLRGFPVEMVPGEDNRYVYRPLGVGAVISPWNFPLAILAGMT 187 (512)
T ss_pred HHHHHHHHHHcCcCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEecceEEEEECCCChHHHHHHHHH
Confidence 99999999999999999875 99999999999999988876554443335567899999999999999999999999999
Q ss_pred hhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhh
Q 012802 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304 (456)
Q Consensus 225 ~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~ 304 (456)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+.+..|..|+++|.|+||||+.+|+.|++.+++
T Consensus 188 ~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~ 267 (512)
T cd07124 188 TAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAK 267 (512)
T ss_pred HHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCCCceEEeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999877889999999999999999999999999999886
Q ss_pred C-----CCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCC
Q 012802 305 S-----NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379 (456)
Q Consensus 305 ~-----~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p 379 (456)
+ +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|++++.++++|+|
T Consensus 268 ~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p 347 (512)
T cd07124 268 VQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTKALKVGDP 347 (512)
T ss_pred ccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCccccceEEEEcHHHHHHHHHHHHHHHHhCCCCCC
Confidence 4 68999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCC--CCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 380 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA--KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 380 ~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~--~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
.|+++++||++++.+++++.++|++++. |+++++||..... +|+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 348 ~d~~~~~Gpli~~~~~~~v~~~i~~a~~-g~~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~ 425 (512)
T cd07124 348 EDPEVYMGPVIDKGARDRIRRYIEIGKS-EGRLLLGGEVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAK 425 (512)
T ss_pred CCCCCcccCCcCHHHHHHHHHHHHHHHh-CCEEEecCccCCCCCCCceEcCEEEecCCCCChHHhCCCcCCeEEEEecC
Confidence 9999999999999999999999999988 9999999976432 69999999999999999999999999999999985
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. |
| >cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-80 Score=643.91 Aligned_cols=380 Identities=31% Similarity=0.568 Sum_probs=354.7
Q ss_pred eecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 012802 69 LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIA 148 (456)
Q Consensus 69 ~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la 148 (456)
+|||+|+.+ +++++++||.||+++++++.++.+|++++++.|++||. .|+++|.++|.++|+++++.|++++++|+
T Consensus 2 ~i~g~~~~~--~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la 77 (474)
T cd07130 2 VYDGEWGGG--GGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFK--EWRDVPAPKRGEIVRQIGDALRKKKEALG 77 (474)
T ss_pred eECCEEecC--CCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 799999974 47899999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCC-CCceEEEEEccceEEEEEcCcChhHHHHHHHHhhh
Q 012802 149 ALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 227 (456)
Q Consensus 149 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 227 (456)
+++++|+|||+.++. .|+..+++.++|++++.+.+.+...+.. .+...+..++|+|||++|+|||||+...++++++|
T Consensus 78 ~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 156 (474)
T cd07130 78 KLVSLEMGKILPEGL-GEVQEMIDICDFAVGLSRQLYGLTIPSERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIA 156 (474)
T ss_pred HHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHhHHHhcCccccCCCCCceEEEEEecceeEEEEccCCCHHHHHHHHhhHH
Confidence 999999999999886 5999999999999988776655443321 24456788999999999999999999999999999
Q ss_pred hhcCCEEEeecCCCChhHHHHHHHH----HHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHh
Q 012802 228 LACGNTIVLKTAEQTPLSALYVSKL----LHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (456)
Q Consensus 228 LaaGN~VVlkps~~~p~~~~~l~~~----l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa 303 (456)
|++||+||+|||+.+|+++..++++ |.++|+|+|++|+++|+ .+.+..|++|++||+|+||||+++|+.|++.++
T Consensus 157 LaaGN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~-~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~aa 235 (474)
T cd07130 157 LVCGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGG-ADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVA 235 (474)
T ss_pred HHcCCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCC-hhHHHHHhcCCCCCEEEEECchHHHHHHHHHHH
Confidence 9999999999999999999988776 46999999999999984 456899999999999999999999999999988
Q ss_pred hCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCC
Q 012802 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (456)
Q Consensus 304 ~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 383 (456)
+ +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||++++
T Consensus 236 ~-~~~~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~ 314 (474)
T cd07130 236 A-RFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDPLDDG 314 (474)
T ss_pred h-cCCCEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHHHHHHHHHHHHHhcCCcCCCCCCC
Confidence 7 889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 384 ~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++||++++.+++++.++|++++++|+++++||...+.+|+|++|||+.++++ |.+++||+||||++|++|+
T Consensus 315 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~~~~-~~i~~eE~FGPvl~v~~~~ 386 (474)
T cd07130 315 TLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTIVEGLSD-APIVKEETFAPILYVLKFD 386 (474)
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEccEEEecCCC-CHHHhCCCcCCeEEEEEeC
Confidence 99999999999999999999999999999999986545689999999998876 9999999999999999996
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. |
| >cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-80 Score=644.68 Aligned_cols=382 Identities=42% Similarity=0.667 Sum_probs=361.2
Q ss_pred ceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHH
Q 012802 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI 147 (456)
Q Consensus 68 ~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~l 147 (456)
+||||+|+.+.++++++++||.||+++++++.++.+|++++++.|++||. .|+++|.++|.++|+++++.|++++++|
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l 78 (466)
T cd07138 1 FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFP--AWSATSVEERAALLERIAEAYEARADEL 78 (466)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 58999999876678899999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhh
Q 012802 148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 227 (456)
Q Consensus 148 a~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 227 (456)
++++++|+|||..++...|+..+++.++|+++..++..+... ....+.+++|+|||++|+|||||+...++++++|
T Consensus 79 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~A 154 (466)
T cd07138 79 AQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEER----RGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPA 154 (466)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccccc----CceEEEEEeecceEEEECCCccHHHHHHHHHHHH
Confidence 999999999999887656899999999999988776644322 2345778999999999999999999999999999
Q ss_pred hhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCC
Q 012802 228 LACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 307 (456)
Q Consensus 228 LaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~ 307 (456)
|++||+||+|||+.+|+++..++++|.++|+|+|++|++++++.+.+..|..|++++.|.||||+.+|+.|++.++. ++
T Consensus 155 LaaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~~ 233 (466)
T cd07138 155 LAAGCTVVLKPSEVAPLSAIILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAAD-TV 233 (466)
T ss_pred HhcCCEEEEECCCcCcHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-cC
Confidence 99999999999999999999999999999999999999999777789999999999999999999999999999987 78
Q ss_pred CcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccc
Q 012802 308 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQG 387 (456)
Q Consensus 308 ~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~G 387 (456)
+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+++++++|
T Consensus 234 ~~v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~g 313 (466)
T cd07138 234 KRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDPATTLG 313 (466)
T ss_pred CeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccC---CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 388 PQIDSEQFEKILKYIRSGVDGGAKLETGGERLG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 388 p~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~---~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
|++++.+++++.+++++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 314 pli~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~ 385 (466)
T cd07138 314 PLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYD 385 (466)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCcCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccC
Confidence 999999999999999999999999999996432 368999999999999999999999999999999985
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. |
| >cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-80 Score=643.68 Aligned_cols=384 Identities=43% Similarity=0.744 Sum_probs=364.2
Q ss_pred eecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 012802 69 LINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIA 148 (456)
Q Consensus 69 ~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la 148 (456)
||||+|+...++++++++||.||+++++++.++.+|++++++.|++|++ .|+.++.++|.++|+++++.|+++.++|+
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 78 (468)
T cd07088 1 YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQK--AWERLPAIERAAYLRKLADLIRENADELA 78 (468)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 6999999766778999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCC-CCceEEEEEccceEEEEEcCcChhHHHHHHHHhhh
Q 012802 149 ALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 227 (456)
Q Consensus 149 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 227 (456)
+++++|+|||..+++. |+..+++.++|++.++.+..+...+.. .+...+.+++|+|||++|+|||||+...++++++|
T Consensus 79 ~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 157 (468)
T cd07088 79 KLIVEEQGKTLSLARV-EVEFTADYIDYMAEWARRIEGEIIPSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPA 157 (468)
T ss_pred HHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCccccCccccceeEEEEecceeEEEEccCchHHHHHHHHHHHH
Confidence 9999999999999874 999999999999998887766544332 24567889999999999999999999999999999
Q ss_pred hhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCC
Q 012802 228 LACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 307 (456)
Q Consensus 228 LaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~ 307 (456)
|++||+||+|||+.+|.++..++++|.++|+|+|++|++++++.+.+..|..|+++|.|.||||+.+|+.|++.+++ ++
T Consensus 158 L~aGN~VVlKps~~~p~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~-~~ 236 (468)
T cd07088 158 LVTGNTIVIKPSEETPLNALEFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAE-NI 236 (468)
T ss_pred HHcCCEEEEECCCcchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cC
Confidence 99999999999999999999999999999999999999999777788999999999999999999999999999887 89
Q ss_pred CcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccc
Q 012802 308 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQG 387 (456)
Q Consensus 308 ~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~G 387 (456)
+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++++++|
T Consensus 237 ~~~~lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~g 316 (468)
T cd07088 237 TKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMG 316 (468)
T ss_pred CcEEEECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccC-CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 388 PQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 388 p~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
|++++.+++++.++|++++++|+++++||.... ++|+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 317 pli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 386 (468)
T cd07088 317 PLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFS 386 (468)
T ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecC
Confidence 999999999999999999999999999997643 469999999999999999999999999999999986
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. |
| >PRK13968 putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-80 Score=639.94 Aligned_cols=371 Identities=27% Similarity=0.447 Sum_probs=348.4
Q ss_pred CeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChh
Q 012802 81 KTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE 160 (456)
Q Consensus 81 ~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 160 (456)
++++++||+||++|++++.++.+|++++++.|++||+ .|++++.++|.++|+++++.|++++++|++++++|+|||+.
T Consensus 7 ~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 84 (462)
T PRK13968 7 THAISVNPATGEQLSVLPWAGADDIENALQLAAAGFR--DWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPIN 84 (462)
T ss_pred CceEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHH
Confidence 5688999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred hhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCC
Q 012802 161 QSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 240 (456)
Q Consensus 161 ~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~ 240 (456)
+++ .|+..+++.++||+...++..+.......+...++.++|+|||++|+|||||+++.++++++||++||+||+|||+
T Consensus 85 ~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~KPs~ 163 (462)
T PRK13968 85 QAR-AEVAKSANLCDWYAEHGPAMLKAEPTLVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAP 163 (462)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHhhCCccccCCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 887 4999999999999988776643322212345678899999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCce
Q 012802 241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPF 320 (456)
Q Consensus 241 ~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~ 320 (456)
.+|+++..+++++.++|+|+|++|+|++++.. +..+..|+++|+|+||||+++|+.|++.++. ++||+++|+|||||+
T Consensus 164 ~tp~~~~~l~~~~~~aGlP~gv~~~v~g~~~~-~~~l~~~~~v~~V~fTGs~~~G~~i~~~aa~-~l~~~~lElGGk~p~ 241 (462)
T PRK13968 164 NVMGCAQLIAQVFKDAGIPQGVYGWLNADNDG-VSQMINDSRIAAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGGSDPF 241 (462)
T ss_pred cChHHHHHHHHHHHHcCcCcCcEEEEecCchh-hHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCcEEEecCCCCce
Confidence 99999999999999999999999999986554 4558899999999999999999999999987 899999999999999
Q ss_pred EeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHH
Q 012802 321 IVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 400 (456)
Q Consensus 321 iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~ 400 (456)
||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|.++++++||+++..+++++.+
T Consensus 242 iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~ 321 (462)
T PRK13968 242 IVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHH 321 (462)
T ss_pred EECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 401 YIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 401 ~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++++++.+|+++++||.....+|+|++||||.+++++|.+++||+||||++|++|+
T Consensus 322 ~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~ 377 (462)
T PRK13968 322 QVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAK 377 (462)
T ss_pred HHHHHHHCCCEEEeCCCcCCCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEEC
Confidence 99999999999999997644458999999999999999999999999999999996
|
|
| >cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-79 Score=640.46 Aligned_cols=387 Identities=43% Similarity=0.701 Sum_probs=362.0
Q ss_pred ceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHH
Q 012802 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI 147 (456)
Q Consensus 68 ~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~l 147 (456)
+||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++||..+.|+.+|..+|.++|+++++.|+++.++|
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~el 80 (471)
T cd07139 1 LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADEL 80 (471)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEeEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 48999999766668899999999999999999999999999999999998445999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcc-cCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhh
Q 012802 148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT-APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 226 (456)
Q Consensus 148 a~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~-~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 226 (456)
++++++|+|||..++...|+..+++.++|++...++..+.. .+...+...+..++|+|||++|+|||||+...++++++
T Consensus 81 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~i~~ 160 (471)
T cd07139 81 ARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEERRPGSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAP 160 (471)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCceEEEEEEeccEEEEEcCCchHHHHHHHHHHH
Confidence 99999999999877766699999999999999887664322 22223456788999999999999999999999999999
Q ss_pred hhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCC
Q 012802 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306 (456)
Q Consensus 227 ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~ 306 (456)
||++||+||+|||+.+|+++..+.++|.++|+|+|++|++++ +.+.+..|+.|++++.|+||||+.+|+.|++.+++ +
T Consensus 161 ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~~~~-~ 238 (471)
T cd07139 161 ALAAGCTVVLKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPA-DREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCGE-R 238 (471)
T ss_pred HHhcCCEEEEECCCcCCHHHHHHHHHHHHcCCCCCcEEEEeC-CHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-c
Confidence 999999999999999999999999999999999999999998 55688999999999999999999999999999887 8
Q ss_pred CCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCcc
Q 012802 307 LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQ 386 (456)
Q Consensus 307 ~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~ 386 (456)
++|+++|+||+||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|.++++++++|+|+++++++
T Consensus 239 ~~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~ 318 (471)
T cd07139 239 LARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDPLDPATQI 318 (471)
T ss_pred CCEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhCCcCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccC--CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 387 GPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 387 Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
||++++.+++++.++|++++.+|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 319 gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~ 390 (471)
T cd07139 319 GPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYD 390 (471)
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecC
Confidence 9999999999999999999999999999997543 358999999999999999999999999999999986
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. |
| >TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-79 Score=644.82 Aligned_cols=387 Identities=34% Similarity=0.543 Sum_probs=362.2
Q ss_pred CccCceecCEeeeCCCCCeeeeecCC-CCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHh
Q 012802 64 DYTQLLINGQFVDSASGKTFPTLDPR-TGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (456)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~-tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~ 142 (456)
...++||||+|+.+ +.+++++||. ||+++++++.++.+|++++++.|++||+ .|++++.++|.++|+++++.|++
T Consensus 31 ~~~~~~i~g~~~~~--~~~~~~~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~ 106 (511)
T TIGR01237 31 KTYPLYINGEYVET--ENKIDSINPCDPSEVVGKVGKASVEQAEHALQIAKKAFE--AWKKTPVRERAGILRKAAAIMER 106 (511)
T ss_pred cccceeECCEEecC--CCeEEeECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHH
Confidence 34578999999964 4568999999 5999999999999999999999999999 99999999999999999999999
Q ss_pred cHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccC-CCCCceEEEEEccceEEEEEcCcChhHHHHH
Q 012802 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221 (456)
Q Consensus 143 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 221 (456)
++++|++++++|+|||+.++.. |+..+++.++|++.++++..+...+ ...+...+++++|+|||++|+|||||+...+
T Consensus 107 ~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~ 185 (511)
T TIGR01237 107 RRHELNALICLEVGKIIPEADA-EVAEAIDFCEYYAREMERLAGQGVNLDIEGETNRYFYQPRGVAVVISPWNFPMAIAV 185 (511)
T ss_pred CHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceeEEEECCCCcHHHHHH
Confidence 9999999999999999999775 9999999999999988877654332 2234567889999999999999999999999
Q ss_pred HHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHH
Q 012802 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (456)
Q Consensus 222 ~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~ 301 (456)
+++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+.+..|+.|++++.|.||||+.+|+.|++.
T Consensus 186 ~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~ 265 (511)
T TIGR01237 186 GMTVAPIVTGNCVVLKPAETSTVIAAKIVEILIEAGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIYED 265 (511)
T ss_pred HHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999777889999999999999999999999999998
Q ss_pred Hhh-----CCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhccc
Q 012802 302 AAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 376 (456)
Q Consensus 302 aa~-----~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~ 376 (456)
++. .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++
T Consensus 266 aa~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~ 345 (511)
T TIGR01237 266 AAKVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLSPVYDAVVERFVEATRSLNV 345 (511)
T ss_pred HhcccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEEehhHHHHHHHHHHHHHHhCCC
Confidence 873 378999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 377 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 377 G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
|+|.++++++||++++.+++++.++|++++++| ++++||....++|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 346 g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~g-~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~~~ 424 (511)
T TIGR01237 346 GPTDDPSTQVGPVIDQKSQAKIQEYIEQGKAEG-ELAIGGCDAPSEGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIRAA 424 (511)
T ss_pred CCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCC-cEEECCccCCCCCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEeeC
Confidence 999999999999999999999999999999999 7889987544568999999999999999999999999999999985
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs. |
| >PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-79 Score=636.84 Aligned_cols=369 Identities=34% Similarity=0.539 Sum_probs=348.2
Q ss_pred eeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhh
Q 012802 83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162 (456)
Q Consensus 83 ~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 162 (456)
++++||.||+++++++.++.+|++++++.|++||. .|+.++.++|.++|+++++.|++++++|++++++|+|||+.++
T Consensus 3 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a 80 (457)
T PRK09406 3 IATINPATGETVKTFTALTDDEVDAAIARAHARFR--DYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLASA 80 (457)
T ss_pred eeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHH
Confidence 68899999999999999999999999999999999 9999999999999999999999999999999999999999998
Q ss_pred hccchHHHHHHHHHHHHHhHhhcCcccCC---CCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecC
Q 012802 163 AQTEVPMTTRLFRYYAGWADKIQGLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239 (456)
Q Consensus 163 ~~~ev~~~~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps 239 (456)
.. |+..+++.++|++..+++..+..... ......+++++|+|||++|+|||||++..++++++||++||+||+|||
T Consensus 81 ~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps 159 (457)
T PRK09406 81 KA-EALKCAKGFRYYAEHAEALLADEPADAAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHA 159 (457)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECC
Confidence 64 99999999999999887765433211 123467889999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCc
Q 012802 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSP 319 (456)
Q Consensus 240 ~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~ 319 (456)
+.+|+++.++++++.++|+|+|++|+|++ +...+..|+.|+++++|+||||+++|+.|++.+++ ++||+++|+|||||
T Consensus 160 ~~~p~~~~~l~~l~~~aGlP~gvv~~v~~-g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~~-~~~~~~lElGG~~~ 237 (457)
T PRK09406 160 SNVPQTALYLADLFRRAGFPDGCFQTLLV-GSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGD-EIKKTVLELGGSDP 237 (457)
T ss_pred CcCcHHHHHHHHHHHHhCCCcCcEEEEcC-CchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh-cCCceeeecCCCCe
Confidence 99999999999999999999999999986 34467889999999999999999999999999887 89999999999999
Q ss_pred eEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHH
Q 012802 320 FIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKIL 399 (456)
Q Consensus 320 ~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~ 399 (456)
+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|+|+++++||++++.+++++.
T Consensus 238 ~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~ 317 (457)
T PRK09406 238 FIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVE 317 (457)
T ss_pred eEECCCCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCcCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 400 KYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 400 ~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++|++++++|+++++||...+.+|+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 318 ~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~ 374 (457)
T PRK09406 318 KQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVA 374 (457)
T ss_pred HHHHHHHHCCCEEEeCCCcCCCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeC
Confidence 999999999999999998655579999999999999999999999999999999986
|
|
| >cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-79 Score=639.15 Aligned_cols=385 Identities=44% Similarity=0.722 Sum_probs=363.2
Q ss_pred ceecCEeeeCCCCCeeeeecCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHH
Q 012802 68 LLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (456)
Q Consensus 68 ~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ 146 (456)
+||||+|+.+.++++++++||+| ++++++++.++.+|++++++.|++||. .|+.++.++|.++|+++++.|++++++
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~l~~~a~~l~~~~~e 78 (478)
T cd07131 1 NYIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFP--EWRKVPAPRRAEYLFRAAELLKKRKEE 78 (478)
T ss_pred CcCCCEeecCCCCCeEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 48999999766678999999999 689999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCC-CCceEEEEEccceEEEEEcCcChhHHHHHHHHh
Q 012802 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225 (456)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 225 (456)
|++++++|+|||+.+++. |+..+++.++|++...+++.+...+.. .+...+.+++|+|||++|+|||||+...+++++
T Consensus 79 la~~~~~e~Gk~~~~~~~-ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~ 157 (478)
T cd07131 79 LARLVTREMGKPLAEGRG-DVQEAIDMAQYAAGEGRRLFGETVPSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIF 157 (478)
T ss_pred HHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCcccccCCCCceEEEEeeceeEEEEECCcCcHHHHHHHHHH
Confidence 999999999999999874 999999999999998887665543321 234678999999999999999999999999999
Q ss_pred hhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhC
Q 012802 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305 (456)
Q Consensus 226 ~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~ 305 (456)
+||++||+||+|||+.+|+++..++++|.++|+|+|++|++++++.+.+..|..|++||.|+||||+.+|+.|++.+++
T Consensus 158 ~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~- 236 (478)
T cd07131 158 PALVCGNTVVFKPAEDTPACALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCAR- 236 (478)
T ss_pred HHHHcCCEEEEECCCcCcHHHHHHHHHHHhcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-
Confidence 9999999999999999999999999999999999999999999777789999999999999999999999999999987
Q ss_pred CCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCc
Q 012802 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 385 (456)
Q Consensus 306 ~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~ 385 (456)
+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.+++++
T Consensus 237 ~~~~~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~ 316 (478)
T cd07131 237 PNKRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDEETD 316 (478)
T ss_pred cCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhHHHHHHHHHHHHHhcCCCCCCCCCCc
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 386 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 386 ~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+||++++.+++++.++|++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 317 ~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~ 391 (478)
T cd07131 317 MGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVS 391 (478)
T ss_pred CCcCCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeC
Confidence 99999999999999999999999999999997532 468999999999999999999999999999999986
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. |
| >TIGR01780 SSADH succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-79 Score=635.78 Aligned_cols=368 Identities=40% Similarity=0.710 Sum_probs=349.3
Q ss_pred eecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhc
Q 012802 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (456)
Q Consensus 85 v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 164 (456)
++||.||+++++++.++.+|++.+++.|++|++ .|+.++.++|.++|+++++.|++++++|++++++|+|||+.+++.
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 78 (448)
T TIGR01780 1 VYNPATGEIIGTVPDQGVEEAEAAIRAAYEAFK--TWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLKEAKG 78 (448)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence 479999999999999999999999999999999 999999999999999999999999999999999999999999874
Q ss_pred cchHHHHHHHHHHHHHhHhhcCcccCC-CCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCCh
Q 012802 165 TEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243 (456)
Q Consensus 165 ~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p 243 (456)
|+..+++.++|++.+.++..+...+. ..+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 79 -ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p 157 (448)
T TIGR01780 79 -EILYAASFLEWFAEEAKRVYGDTIPSPQSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTP 157 (448)
T ss_pred -HHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccch
Confidence 99999999999998887776654432 2344567889999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCCCCeEEEecCC-chHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEe
Q 012802 244 LSALYVSKLLHEAGLPPGVLNIVSGY-GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 322 (456)
Q Consensus 244 ~~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV 322 (456)
+++..++++|.++|+|+|++|+++++ +.+.+..|+.|++++.|+||||+.+|+.|++.++. +++|+++|+|||||+||
T Consensus 158 ~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa~-~~~~~~lElGGk~~~iV 236 (448)
T TIGR01780 158 LSALALARLAEQAGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSAS-TVKKVSMELGGNAPFIV 236 (448)
T ss_pred HHHHHHHHHHHHcCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCCceEeecCCCCeeEE
Confidence 99999999999999999999999997 67788999999999999999999999999999987 89999999999999999
Q ss_pred ccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHH
Q 012802 323 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 402 (456)
Q Consensus 323 ~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i 402 (456)
++|+|+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.++++++||++++.+++++.++|
T Consensus 237 ~~dadl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i 316 (448)
T TIGR01780 237 FDDADIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHI 316 (448)
T ss_pred CCCCCHHHHHHHHHHHHHHhcCCcccCCceeechHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 403 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 403 ~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++++++|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 317 ~~a~~~Ga~il~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~ 370 (448)
T TIGR01780 317 ADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFD 370 (448)
T ss_pred HHHHHCCCEEEeCCCcCCCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEEC
Confidence 999999999999997654568999999999999999999999999999999996
|
SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070). |
| >cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-79 Score=640.59 Aligned_cols=388 Identities=34% Similarity=0.554 Sum_probs=363.1
Q ss_pred CCCccCceecCEeeeCCCCCeeeeecCC-CCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHH
Q 012802 62 KVDYTQLLINGQFVDSASGKTFPTLDPR-TGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLL 140 (456)
Q Consensus 62 ~~~~~~~~I~G~~~~~~~~~~~~v~~P~-tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l 140 (456)
.....++||||+|+.+ +.+++++||. ||+++++++.++.+|++++++.|++||+ .|+.+|.++|.++|+++++.|
T Consensus 15 ~~~~~~~~i~g~~~~~--~~~~~~~~P~~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l 90 (500)
T cd07083 15 FGRAYPLVIGGEWVDT--KERMVSVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFK--TWKDWPQEDRARLLLKAADLL 90 (500)
T ss_pred ccccccceECCEEecC--CCceEeeCCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHH
Confidence 3445689999999863 4678999998 6999999999999999999999999999 999999999999999999999
Q ss_pred HhcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCccc--CCCCCceEEEEEccceEEEEEcCcChhHH
Q 012802 141 ERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA--PADGPYHVQTLHEPIGVAGQIIPWNFPLL 218 (456)
Q Consensus 141 ~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~--~~~~~~~~~~~~~P~GVv~~i~p~n~P~~ 218 (456)
++++++|+++++.|+|||+.++. .|+..+++.++||++++.+..+... +...+...+++++|+|||++|+|||||+.
T Consensus 91 ~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~ 169 (500)
T cd07083 91 RRRRRELIATLTYEVGKNWVEAI-DDVAEAIDFIRYYARAALRLRYPAVEVVPYPGEDNESFYVGLGAGVVISPWNFPVA 169 (500)
T ss_pred HhCHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCCceEEEEEeccceEEEEcCCccHHH
Confidence 99999999999999999999866 5999999999999999887765432 22235567889999999999999999999
Q ss_pred HHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHH
Q 012802 219 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 298 (456)
Q Consensus 219 ~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i 298 (456)
..++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.+.+..|+.|++||.|+||||+.+|+.|
T Consensus 170 ~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~v 249 (500)
T cd07083 170 IFTGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKI 249 (500)
T ss_pred HHHHHHHHHHHcCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999777889999999999999999999999999
Q ss_pred HHHHhhCCC------CcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhh
Q 012802 299 LQLAAKSNL------KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAM 372 (456)
Q Consensus 299 ~~~aa~~~~------~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~ 372 (456)
++.+++ ++ +|+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++
T Consensus 250 ~~~aa~-~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~ 328 (500)
T cd07083 250 YEAAAR-LAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPVLERLLKRAE 328 (500)
T ss_pred HHHHhh-ccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHH
Confidence 999887 54 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEE
Q 012802 373 KRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSI 452 (456)
Q Consensus 373 ~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v 452 (456)
++++|+|.++.+++||++++.+++++.++|++++++| ++++||....+.|+|++|||+.+++++|.+++||+||||++|
T Consensus 329 ~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g-~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v 407 (500)
T cd07083 329 RLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSV 407 (500)
T ss_pred cCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-EEEeCCCcCCCCCeEEccEEEeCCCCCChHhhCCCCCceEEE
Confidence 9999999999999999999999999999999999887 899999765556899999999999999999999999999999
Q ss_pred EEeC
Q 012802 453 LKYK 456 (456)
Q Consensus 453 ~~~~ 456 (456)
++|+
T Consensus 408 ~~~~ 411 (500)
T cd07083 408 IRYK 411 (500)
T ss_pred EEeC
Confidence 9985
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. |
| >cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-79 Score=639.62 Aligned_cols=380 Identities=27% Similarity=0.338 Sum_probs=344.4
Q ss_pred CceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHHHHHHHhcHH
Q 012802 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKA-FDEGPWPRMTAYERSKIILRFADLLERHND 145 (456)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A-~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (456)
++||||+|+.+ ++++++++||+||+++++++.++ +|+++|+++|++| |+ .|+.++.++|.++|+++++.|+++++
T Consensus 2 ~~~I~g~~~~~-~~~~~~~~nP~tg~~~~~~~~~~-~dv~~Av~~A~~A~~~--~W~~~~~~~Ra~~L~~~a~~l~~~~~ 77 (513)
T cd07128 2 QSYVAGQWHAG-TGDGRTLHDAVTGEVVARVSSEG-LDFAAAVAYAREKGGP--ALRALTFHERAAMLKALAKYLMERKE 77 (513)
T ss_pred ceeECCEEEcC-CCCEEEeECCCCCCEEEEEcCCH-HHHHHHHHHHHHhhhc--hhhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 67999999976 36789999999999999999876 8999999999997 67 89999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcC--------cccCCCC-C-ceEEEEEcc-ceEEEEEcCcC
Q 012802 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG--------LTAPADG-P-YHVQTLHEP-IGVAGQIIPWN 214 (456)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~--------~~~~~~~-~-~~~~~~~~P-~GVv~~i~p~n 214 (456)
+|+++ +.|+|||+.+++ .|+..+++.++||++++++..+ ...+... + ...++.++| +|||++|+|||
T Consensus 78 ~la~l-~~e~Gkp~~ea~-~Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN 155 (513)
T cd07128 78 DLYAL-SAATGATRRDSW-IDIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFN 155 (513)
T ss_pred HHHHH-HHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHhhccccccccCCcccccCCCccccceEEEEecccEEEEECCcc
Confidence 99996 899999999987 4999999999999998877542 2222111 1 245678999 59999999999
Q ss_pred hhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcC-CCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChH
Q 012802 215 FPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 293 (456)
Q Consensus 215 ~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aG-lP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~ 293 (456)
||+...++++++||++||+||+|||+.+|+++..+++++.++| +|+|++|+|+|++..++..+ +.+|+|.||||++
T Consensus 156 ~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaG~lP~gv~~~v~g~~~~~~~~l---~~~d~v~fTGS~~ 232 (513)
T cd07128 156 FPVWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICGSVGDLLDHL---GEQDVVAFTGSAA 232 (513)
T ss_pred cHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCCCCCCcEEEecCChHHHhccc---CCCCEEEEECCHH
Confidence 9999999999999999999999999999999999999999999 99999999998644444332 5789999999999
Q ss_pred HHHHHHHHHh-hCCCCcEEEecCCCCceEeccCCC-----HHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHH
Q 012802 294 TGKIVLQLAA-KSNLKPVTLELGGKSPFIVCEDAD-----VDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 367 (456)
Q Consensus 294 ~g~~i~~~aa-~~~~~pv~lelgG~~~~iV~~daD-----~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l 367 (456)
+|+.|++.++ ..+++|+++|+|||||+||++||| +|.+++.+++++|.|+||.|++++|+|||+++||+|+++|
T Consensus 233 ~G~~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l 312 (513)
T cd07128 233 TAAKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEAL 312 (513)
T ss_pred HHHHHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEEEehHHHHHHHHHH
Confidence 9999999863 237899999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCccc-------CCCCceEecEEEeeCCCC--C
Q 012802 368 NALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL-------GAKGYYIKPTVFTGVKDD--M 438 (456)
Q Consensus 368 ~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~-------~~~g~~~~PTvl~~v~~~--~ 438 (456)
+++++++++|+|+++++++||++++.+++++.++|++++++ |++++||... .++|+|++|||+.+++++ |
T Consensus 313 ~~~~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~-A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~ 391 (513)
T cd07128 313 KARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAE-AEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAAT 391 (513)
T ss_pred HHHHHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhC-CEEEECCCccccccCCCCCCCEEECCEEEeccCCcccc
Confidence 99999999999999999999999999999999999999988 9999999652 136899999999999874 8
Q ss_pred cccccccccceeEEEEeC
Q 012802 439 LIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 439 ~i~~~EifGPvl~v~~~~ 456 (456)
.+++||+||||++|++|+
T Consensus 392 ~i~~eE~FGPVl~V~~~~ 409 (513)
T cd07128 392 AVHDVEAFGPVATLMPYD 409 (513)
T ss_pred hHHhCCCcCCeEEEEeeC
Confidence 999999999999999996
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. |
| >cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-79 Score=636.74 Aligned_cols=378 Identities=46% Similarity=0.778 Sum_probs=358.0
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 012802 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (456)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (456)
..++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++||. .|++++.++|.++|+++++.|++++
T Consensus 21 ~~~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~a~~~~v~~ai~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 98 (480)
T cd07111 21 SFGHFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFE--SWSALPGHVRARHLYRIARHIQKHQ 98 (480)
T ss_pred cccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhH
Confidence 45789999999866678899999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHH
Q 012802 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (456)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 224 (456)
++|++++++|+|||+.+++..|+..+++.+++++.+.+...+. ...++|+|||++|+|||||+...++++
T Consensus 99 ~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~----------~~~~~P~GVV~~I~PwN~P~~~~~~~i 168 (480)
T cd07111 99 RLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLDTE----------LAGWKPVGVVGQIVPWNFPLLMLAWKI 168 (480)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----------cccceecceEEEECCCccHHHHHHHHH
Confidence 9999999999999999987669999999999998887654321 345799999999999999999999999
Q ss_pred hhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhh
Q 012802 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304 (456)
Q Consensus 225 ~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~ 304 (456)
++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|++++ +.+..|..|+++|.|+||||+.+|+.|++.+++
T Consensus 169 ~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~-~~~~~l~~~~~v~~v~ftGs~~~g~~v~~~aa~ 247 (480)
T cd07111 169 CPALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPGVLNIVTGNG-SFGSALANHPGVDKVAFTGSTEVGRALRRATAG 247 (480)
T ss_pred HHHHHcCCEEEEECCCCChHHHHHHHHHHHhcCCCcccEEEEeCCc-hHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999865 578999999999999999999999999999887
Q ss_pred CCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCC
Q 012802 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384 (456)
Q Consensus 305 ~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 384 (456)
+++|+++|+|||||+||++|+|+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++
T Consensus 248 -~~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~ 326 (480)
T cd07111 248 -TGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRVGDPLDKAI 326 (480)
T ss_pred -cCCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 7899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 385 ~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++||++++.+++++.++|++++++|+++++||...+++|+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 327 ~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~ 398 (480)
T cd07111 327 DMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFR 398 (480)
T ss_pred ccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcCCCCCCeeEeecCC
Confidence 999999999999999999999999999999987544579999999999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. |
| >TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-79 Score=637.29 Aligned_cols=383 Identities=31% Similarity=0.463 Sum_probs=355.4
Q ss_pred ceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHH
Q 012802 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI 147 (456)
Q Consensus 68 ~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~l 147 (456)
+||||+|+.+ ++++++++||.||+++++++.++.+|++++++.|++||+ .|+.++.++|.++|+++++.|++++++|
T Consensus 1 ~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el 77 (484)
T TIGR03240 1 LFIDGKWRAG-QGESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFP--AWARLSLEERIAVVQRFAALLEERKEAL 77 (484)
T ss_pred CeECCEEecC-CCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 4899999875 468899999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhh
Q 012802 148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 227 (456)
Q Consensus 148 a~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 227 (456)
++++++|+|||..++. .|+..+++.++|++....+..+.......+...++.++|+|||++|+|||||+...++++++|
T Consensus 78 a~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~A 156 (484)
T TIGR03240 78 ARVIARETGKPLWETR-TEVASMIGKVAISIKAYHERTGESENPMPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPA 156 (484)
T ss_pred HHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEecccEEEEECCCchHHHHHHHHHHHH
Confidence 9999999999999887 599999999999888776665543221223456788999999999999999999999999999
Q ss_pred hhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCC
Q 012802 228 LACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 307 (456)
Q Consensus 228 LaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~ 307 (456)
|++||+||+|||+.+|+++..+++++.++|+|+|++|+|+| +.+.+..|+.|+++|.|+||||+++|+.|++.++.+..
T Consensus 157 LaaGN~VVlKPs~~tp~t~~~l~~~~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~aa~~~~ 235 (484)
T TIGR03240 157 LLAGNTVVFKPSELTPWVAEETVKLWEKAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPE 235 (484)
T ss_pred HHcCCEEEEECCccccHHHHHHHHHHHHhCcCcccEEEEeC-CHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhcCC
Confidence 99999999999999999999999999999999999999998 56788999999999999999999999999998876457
Q ss_pred CcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchH-HHHHHHHHHHhhhcccCCC-CCCCCc
Q 012802 308 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY-DQFVEKANALAMKRVVGDP-FKGGIQ 385 (456)
Q Consensus 308 ~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-d~f~~~l~~~~~~~~~G~p-~~~~~~ 385 (456)
+++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++ |+|+++|.++++++++|+| .+++++
T Consensus 236 ~~~~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~ 315 (484)
T TIGR03240 236 KILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLVEVAERLTVGAWDAEPQPF 315 (484)
T ss_pred CcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccHHHHHHHHHHHHHhcccCCCCcCCCCc
Confidence 88999999999999999999999999999999999999999999999999985 9999999999999999997 578899
Q ss_pred cccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 386 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 386 ~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+||+++..+++++.++|++++++|+++++||...+++|+|++|||+ +++++|.+++||+||||++|++|+
T Consensus 316 ~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~i~PTvl-~v~~~~~i~~eE~FGPVl~v~~~~ 385 (484)
T TIGR03240 316 MGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALLTPGII-DVTGVAELPDEEHFGPLLQVIRYD 385 (484)
T ss_pred ccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCEEEcCEEE-ccCCCCHHHhCCCcCCeEEEEEeC
Confidence 9999999999999999999999999999988754456899999999 699999999999999999999996
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism. |
| >PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-79 Score=641.52 Aligned_cols=385 Identities=36% Similarity=0.587 Sum_probs=360.3
Q ss_pred ccCceecCEeeeCCCCCeeeeecCC-CCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 012802 65 YTQLLINGQFVDSASGKTFPTLDPR-TGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (456)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~-tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (456)
..++||||+|+.+ +.+++++||+ ||+++++++.++.+|++++++.|++||. .|+.++.++|.++|+++++.|+++
T Consensus 36 ~~~~~i~g~~~~~--~~~~~~~~P~~t~~~i~~~~~a~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~ 111 (514)
T PRK03137 36 DYPLIIGGERITT--EDKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFE--TWKKWSPEDRARILLRAAAIIRRR 111 (514)
T ss_pred ccceeECCEEecC--CCeeEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHC
Confidence 4578999999964 5679999999 6999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhc-CcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHH
Q 012802 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ-GLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (456)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (456)
.++|++++++|+|||+.+++. |+..+++.++||+..+++.. +.......+...+++++|+|||++|+|||||+...++
T Consensus 112 ~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 190 (514)
T PRK03137 112 KHEFSAWLVKEAGKPWAEADA-DTAEAIDFLEYYARQMLKLADGKPVESRPGEHNRYFYIPLGVGVVISPWNFPFAIMAG 190 (514)
T ss_pred HHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCceEEEEEecCcEEEEECCCccHHHHHHH
Confidence 999999999999999999875 99999999999999887764 3222222355678999999999999999999999999
Q ss_pred HHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHH
Q 012802 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (456)
Q Consensus 223 ~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~a 302 (456)
++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.+.+..|++|++++.|+||||+.+|+.|++.+
T Consensus 191 ~i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~a 270 (514)
T PRK03137 191 MTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERA 270 (514)
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999997778899999999999999999999999999998
Q ss_pred hhC-----CCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccC
Q 012802 303 AKS-----NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 377 (456)
Q Consensus 303 a~~-----~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G 377 (456)
+.. ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 271 a~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g 350 (514)
T PRK03137 271 AKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLEKVVELTKELTVG 350 (514)
T ss_pred hcccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeHHHHHHHHHHHHHHHHhCCCC
Confidence 752 689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 378 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 378 ~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+|.++. ++||++++.+++++.++|++++++ +++++||.....+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 351 ~p~~~~-~~Gpli~~~~~~~v~~~v~~a~~~-~~vl~Gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~ 427 (514)
T PRK03137 351 NPEDNA-YMGPVINQASFDKIMSYIEIGKEE-GRLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAK 427 (514)
T ss_pred CCCCcc-CcCCCCCHHHHHHHHHHHHHHHhC-CEEEeCCCcCCCCceEEeeEEEeCCCCCCHHHhCCCCCceEEEEecC
Confidence 999998 999999999999999999999887 69999997654579999999999999999999999999999999985
|
|
| >TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-78 Score=635.62 Aligned_cols=384 Identities=32% Similarity=0.507 Sum_probs=361.5
Q ss_pred CceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHH
Q 012802 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (456)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ 146 (456)
++||||+|+.+.++++++++||+||++|++++.++.+|++++++.|++||+ .|++++.++|.++|+++++.|++++++
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~ai~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~ 79 (477)
T TIGR01722 2 NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFL--TWGQTSLAQRTSVLLRYQALLKEHRDE 79 (477)
T ss_pred ceeECCEEecCCCCCeEeeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 579999999766678899999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCC-CCceEEEEEccceEEEEEcCcChhHHHHHHHHh
Q 012802 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225 (456)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 225 (456)
|+++++.|+|||+.+++ .|+..+++.++|++...+.+.+...+.. .+...+.+++|+|||++|+|||||+...+++++
T Consensus 80 l~~~~~~e~Gk~~~~a~-~ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~ 158 (477)
T TIGR01722 80 IAELITAEHGKTHSDAL-GDVARGLEVVEHACGVNSLLKGETSTQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFP 158 (477)
T ss_pred HHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEcccceEEEEccCChHHHHHHHHHH
Confidence 99999999999999987 5999999999999988877766544321 344567899999999999999999999999999
Q ss_pred hhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhC
Q 012802 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305 (456)
Q Consensus 226 ~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~ 305 (456)
+||++||+||+|||+.+|+++..+.++|.++|+|+|++|+|+| +.+.+..|+.|++|+.|+||||+.+|+.|.+.++.
T Consensus 159 ~ALaaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~~~~v~g-~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~a~~- 236 (477)
T TIGR01722 159 IAIACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHG-DKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSA- 236 (477)
T ss_pred HHHhcCCEEEeeCcccChHHHHHHHHHHHHhCcCCCeEEEEeC-CHHHHHHHHcCCCcCEEEEECCHHHHHHHHHHHHh-
Confidence 9999999999999999999999999999999999999999998 45568899999999999999999999999999887
Q ss_pred CCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCc
Q 012802 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 385 (456)
Q Consensus 306 ~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~ 385 (456)
++||+++|+||+||+||++|||+|.|++.+++++|.|+||.|++++|||||+++ |+|+++|+++++++++|+|.+++++
T Consensus 237 ~~~~v~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~-~~f~~~l~~~~~~~~~G~~~~~~~~ 315 (477)
T TIGR01722 237 HGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-DEWVPEIRERAEKIRIGPGDDPGAE 315 (477)
T ss_pred cCCeEEEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcH-HHHHHHHHHHHhcCCCCCCCCCCCC
Confidence 889999999999999999999999999999999999999999999999999998 9999999999999999999999999
Q ss_pred cccCCCHHHHHHHHHHHHHHhhCCCEEEeCCccc----CCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 386 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL----GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 386 ~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
|||++++.+++++.++|++++++|+++++||... .++|+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 316 ~Gp~i~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~ 390 (477)
T TIGR01722 316 MGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEAD 390 (477)
T ss_pred cCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeC
Confidence 9999999999999999999999999999999752 1368999999999999999999999999999999986
|
In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus. |
| >cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-79 Score=635.52 Aligned_cols=378 Identities=40% Similarity=0.639 Sum_probs=357.3
Q ss_pred CEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHH
Q 012802 72 GQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALE 151 (456)
Q Consensus 72 G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~ 151 (456)
|+|+.+.++.+++++||+||+++++++.++.+|++++++.|++|+. .|++++..+|.++|+++++.|++++++|++++
T Consensus 1 g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~ 78 (465)
T cd07151 1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQK--EWAATLPQERAEILEKAAQILEERRDEIVEWL 78 (465)
T ss_pred CCceeCCCCCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 6787766667899999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred HHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCC-CCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhc
Q 012802 152 TWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALAC 230 (456)
Q Consensus 152 ~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaa 230 (456)
++|+|||+.++.. |+..+++.++|++.+.++..+...+.. .+...+++++|+|||++|+|||||+...++++++||++
T Consensus 79 ~~e~Gk~~~~a~~-Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaa 157 (465)
T cd07151 79 IRESGSTRIKANI-EWGAAMAITREAATFPLRMEGRILPSDVPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALAL 157 (465)
T ss_pred HHHcCCCHHHHHH-HHHHHHHHHHHHHHhHHHhcCccccCCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHc
Confidence 9999999999875 999999999999998877765544322 24567889999999999999999999999999999999
Q ss_pred CCEEEeecCCCChhHH-HHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCc
Q 012802 231 GNTIVLKTAEQTPLSA-LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKP 309 (456)
Q Consensus 231 GN~VVlkps~~~p~~~-~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~p 309 (456)
||+||+|||+.+|.++ ..+.+++.++|+|+|++|+++|++.+.+..|+.|+.++.|.||||+.+|+.|++.+++ +++|
T Consensus 158 GN~Vi~Kps~~~p~~~~~~l~~~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~~~~ 236 (465)
T cd07151 158 GNAVVLKPASDTPITGGLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGR-HLKK 236 (465)
T ss_pred CCEEEEECCCCCcHhHHHHHHHHHHHcCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCc
Confidence 9999999999999996 7899999999999999999998777889999999999999999999999999999987 8999
Q ss_pred EEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccC
Q 012802 310 VTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQ 389 (456)
Q Consensus 310 v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~ 389 (456)
+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.++++++||+
T Consensus 237 ~~lElGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl 316 (465)
T cd07151 237 VALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVGPL 316 (465)
T ss_pred EEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 390 IDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 390 i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++.+++++.+++++++++|+++++||.. .|+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 317 i~~~~~~~v~~~v~~a~~~ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~ 380 (465)
T cd07151 317 INESQVDGLLDKIEQAVEEGATLLVGGEA---EGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKAD 380 (465)
T ss_pred cCHHHHHHHHHHHHHHHhCCCEEEecCCc---CCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeC
Confidence 99999999999999999999999999964 58999999999999999999999999999999986
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. |
| >TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-78 Score=630.98 Aligned_cols=377 Identities=35% Similarity=0.514 Sum_probs=352.9
Q ss_pred cCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHH
Q 012802 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (456)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (456)
-++||||+|+. ++++++++||+||+++++++.++.+|+++|++.|++||. .++..+|.++|+++++.|+++.+
T Consensus 4 ~~~~i~g~~~~--~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~-----~~~~~~R~~~l~~~a~~l~~~~~ 76 (472)
T TIGR03250 4 EALRIAGEKVS--RDRVIEVRYPYNGTVVGTVPKASVDDVRRAFAIAAAYRP-----TLTRYERSAILDRAAALLAARKE 76 (472)
T ss_pred CCceECCEEec--CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHh-----hCCHHHHHHHHHHHHHHHHHhHH
Confidence 36799999986 357899999999999999999999999999999988764 68999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccC-----CCCCceEEEEEccc-eEEEEEcCcChhHHH
Q 012802 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-----ADGPYHVQTLHEPI-GVAGQIIPWNFPLLM 219 (456)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~-----~~~~~~~~~~~~P~-GVv~~i~p~n~P~~~ 219 (456)
+|++++++|+|||+.+++. |+..+++.++|++..+.+..+...+ ...+...++.++|+ |||++|+|||||+..
T Consensus 77 ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~ 155 (472)
T TIGR03250 77 EISDLITLESGLSKKDSLY-EVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQ 155 (472)
T ss_pred HHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHH
Confidence 9999999999999999874 9999999999999988776554332 11234567899998 999999999999999
Q ss_pred HHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHH
Q 012802 220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299 (456)
Q Consensus 220 ~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~ 299 (456)
.++++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+++|++.+.+..|+.|++++.|.||||+.+|+.|+
T Consensus 156 ~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~ 235 (472)
T TIGR03250 156 VAHKIAPAIATNNRMVVKPSEKTPLSALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIA 235 (472)
T ss_pred HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999997777899999999999999999999999999
Q ss_pred HHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCC
Q 012802 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379 (456)
Q Consensus 300 ~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p 379 (456)
+.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus 236 ~~a~---~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p 312 (472)
T TIGR03250 236 ARAG---YRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDP 312 (472)
T ss_pred HHhc---CCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCC
Confidence 8874 5899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 380 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 380 ~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++++++||+++..+++++.+++++++++|+++++||.. .|+|++||||.+++++|++++||+||||++|++|+
T Consensus 313 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~---~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~ 386 (472)
T TIGR03250 313 MDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVR---DGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFC 386 (472)
T ss_pred CCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCc---CCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeC
Confidence 999999999999999999999999999999999999964 48999999999999999999999999999999986
|
It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. |
| >cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-78 Score=624.16 Aligned_cols=369 Identities=35% Similarity=0.589 Sum_probs=348.1
Q ss_pred eecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhc
Q 012802 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (456)
Q Consensus 85 v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 164 (456)
++||+||+++++++.++.+|+++|++.|++||..+.|+. +..+|.++|+++++.|++++++|++++++|+|||+.+++.
T Consensus 1 ~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 79 (455)
T cd07120 1 SIDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKILGEARF 79 (455)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 479999999999999999999999999999998334998 9999999999999999999999999999999999999875
Q ss_pred cchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChh
Q 012802 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244 (456)
Q Consensus 165 ~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~ 244 (456)
|+..+++.++||++++++..+...+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus 80 -Ev~~~i~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~~~ 158 (455)
T cd07120 80 -EISGAISELRYYAGLARTEAGRMIEPEPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQ 158 (455)
T ss_pred -HHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeECCCCChH
Confidence 9999999999999988877665443223456789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH-cCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEec
Q 012802 245 SALYVSKLLHE-AGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 323 (456)
Q Consensus 245 ~~~~l~~~l~~-aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~ 323 (456)
++..++++|.+ +|+|+|++|++++++.+.+..|+.|++++.|.||||+.+|+.|++.++. ++||+++|+||+||+||+
T Consensus 159 ~~~~l~~~~~~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~~~~~~lElGG~~~~IV~ 237 (455)
T cd07120 159 INAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAP-TLKRLGLELGGKTPCIVF 237 (455)
T ss_pred HHHHHHHHHHHhcCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeEEEECCCCCeeEEC
Confidence 99999999999 7999999999998777889999999999999999999999999999887 789999999999999999
Q ss_pred cCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHH
Q 012802 324 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 403 (456)
Q Consensus 324 ~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~ 403 (456)
+|+|+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|+
T Consensus 238 ~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~ 317 (455)
T cd07120 238 DDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVE 317 (455)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCCcCCccCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCCCEEEeCCcccC---CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 404 SGVDGGAKLETGGERLG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 404 ~a~~~Ga~v~~gg~~~~---~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++++|+++++||...+ .+|+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 318 ~a~~~ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~ 373 (455)
T cd07120 318 RAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFD 373 (455)
T ss_pred HHHHCCCEEEeCCccCcccCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecC
Confidence 99999999999886533 268999999999999999999999999999999986
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. |
| >TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-78 Score=646.37 Aligned_cols=380 Identities=25% Similarity=0.348 Sum_probs=346.6
Q ss_pred CceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHHHHHHHhcHH
Q 012802 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKA-FDEGPWPRMTAYERSKIILRFADLLERHND 145 (456)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A-~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (456)
++||||+|+.+. +++++++||.||+++++++.++ .|+++|++.|++| |+ .|++++..+|.++|+++++.|+++++
T Consensus 2 ~~~i~g~~~~~~-~~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~~A~~aa~~--~W~~~~~~eR~~~L~~~a~~l~~~~~ 77 (663)
T TIGR02278 2 QSYLSGEWRTGQ-GEGVPVRDASTGEVLARVTSEG-LDVAAAVAWAREVGGP--ALRALTFHERARMLKALAQYLSERKE 77 (663)
T ss_pred ceeECCEEEcCC-CCeEeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhcch--hhhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 579999998753 5789999999999999999999 5999999999996 88 89999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhc--------CcccCCC--CCceEEEEEccc-eEEEEEcCcC
Q 012802 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ--------GLTAPAD--GPYHVQTLHEPI-GVAGQIIPWN 214 (456)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~--------~~~~~~~--~~~~~~~~~~P~-GVv~~i~p~n 214 (456)
+|++ +++|+|||+.+++. |+..+++.++||+.++++.. +...+.. .+...++.++|+ |||++|+|||
T Consensus 78 ela~-~~~e~GK~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~Gvv~~I~pwN 155 (663)
T TIGR02278 78 ALYA-LAATTGATRRDNWV-DIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFN 155 (663)
T ss_pred HHHH-HHHHcCCCHHHHHH-HHHHHHHHHHHHHHhhhhhccccccccCCceeccCCCCccceEEEEEeCCceEEEEcCCc
Confidence 9999 59999999999875 99999999999999887632 3333321 123568899998 9999999999
Q ss_pred hhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcC-CCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChH
Q 012802 215 FPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 293 (456)
Q Consensus 215 ~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aG-lP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~ 293 (456)
||+...++++++||++||+||+|||+.+|+++..+++++.++| +|+|++|+|+|+. +..+..+++++.|+||||++
T Consensus 156 ~P~~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~aG~lP~gv~~~v~g~~---~~~~~~~~~~~~V~FTGS~~ 232 (663)
T TIGR02278 156 FPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSLQLICGSA---GDLLDHLDHRDVVAFTGSAA 232 (663)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCcEEEEeCCh---HHHHhcCCCCCEEEEECCHH
Confidence 9999999999999999999999999999999999999999999 9999999999852 23334347789999999999
Q ss_pred HHHHHHHHHh-hCCCCcEEEecCCCCceEeccCCC-----HHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHH
Q 012802 294 TGKIVLQLAA-KSNLKPVTLELGGKSPFIVCEDAD-----VDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 367 (456)
Q Consensus 294 ~g~~i~~~aa-~~~~~pv~lelgG~~~~iV~~daD-----~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l 367 (456)
+|+.|++.++ ..+++|+++|||||||+||++||| +|.|++.+++++|.|+||.|++++|||||++++|+|+++|
T Consensus 233 ~G~~i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l 312 (663)
T TIGR02278 233 TADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKAL 312 (663)
T ss_pred HHHHHHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEEEeHHHHHHHHHHH
Confidence 9999998743 238899999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCC-cccccccc
Q 012802 368 NALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDM-LIAKDEIF 446 (456)
Q Consensus 368 ~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~-~i~~~Eif 446 (456)
.+++.++++|+|.++++++||++++.+++++.++|++++++|+++++||... .+|+|++|||+.+++++| .+++||+|
T Consensus 313 ~~~~~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~-~~g~~~~PTvl~~~~~~~~~i~~eE~F 391 (663)
T TIGR02278 313 QARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGR-LDGAFFPPTLLLAEDPWAGAVHATEAF 391 (663)
T ss_pred HHHHHhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcC-CCCeeEccEEEeeCCcchhhHHhcccc
Confidence 9999999999999999999999999999999999999999999999999753 358999999999999886 79999999
Q ss_pred cceeEEEEeC
Q 012802 447 GPVQSILKYK 456 (456)
Q Consensus 447 GPvl~v~~~~ 456 (456)
|||++|++|+
T Consensus 392 GPVl~V~~~~ 401 (663)
T TIGR02278 392 GPVATFFPYG 401 (663)
T ss_pred CCeEEEEeeC
Confidence 9999999996
|
This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. |
| >cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-77 Score=624.62 Aligned_cols=376 Identities=51% Similarity=0.860 Sum_probs=354.1
Q ss_pred CeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChh
Q 012802 81 KTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE 160 (456)
Q Consensus 81 ~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 160 (456)
++++++||+||+++++++.++.+|++++++.|++||+.+.|+.++.++|.++|+++++.|++++++|++++++|+|||+.
T Consensus 2 ~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 81 (462)
T cd07112 2 ETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPIS 81 (462)
T ss_pred CeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH
Confidence 46899999999999999999999999999999999974469999999999999999999999999999999999999999
Q ss_pred hhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCC
Q 012802 161 QSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 240 (456)
Q Consensus 161 ~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~ 240 (456)
++...|+..+++.++|++.+.++..+...+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 82 ~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~ 161 (462)
T cd07112 82 DALAVDVPSAANTFRWYAEAIDKVYGEVAPTGPDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAE 161 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCCeeeeeCCC
Confidence 88656999999999999999887766543333345677899999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCce
Q 012802 241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPF 320 (456)
Q Consensus 241 ~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~ 320 (456)
.+|+++..++++|.++|+|+|++|+|++++.+.+..|..|++++.|.||||+.+|+.|++.++..++||+++|+||+||+
T Consensus 162 ~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~lelgG~n~~ 241 (462)
T cd07112 162 QSPLTALRLAELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGKSPN 241 (462)
T ss_pred CCCHHHHHHHHHHHhcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHHhcCCEEEecCCCCCeE
Confidence 99999999999999999999999999997778899999999999999999999999999998844789999999999999
Q ss_pred EeccCC-CHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHH
Q 012802 321 IVCEDA-DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKIL 399 (456)
Q Consensus 321 iV~~da-D~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~ 399 (456)
||++|+ |++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|+++++++||++++.+++++.
T Consensus 242 iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~ 321 (462)
T cd07112 242 IVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVSEAHFDKVL 321 (462)
T ss_pred EECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHH
Confidence 999999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCCEEEeCCcccC--CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 400 KYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 400 ~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++|++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 322 ~~v~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~ 380 (462)
T cd07112 322 GYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFD 380 (462)
T ss_pred HHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeC
Confidence 999999999999999997532 358999999999999999999999999999999986
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. |
| >cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-78 Score=626.42 Aligned_cols=368 Identities=41% Similarity=0.674 Sum_probs=349.1
Q ss_pred eeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhh
Q 012802 83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162 (456)
Q Consensus 83 ~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 162 (456)
++++||.||+++++++.++.+|++++++.|++||+ .|+.++.++|.++|+++++.|++++++|++++++|+|||+.++
T Consensus 1 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a 78 (456)
T cd07145 1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKD--VMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIKQS 78 (456)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHH
Confidence 36789999999999999999999999999999999 9999999999999999999999999999999999999999998
Q ss_pred hccchHHHHHHHHHHHHHhHhhcCcccCCC-----CCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEee
Q 012802 163 AQTEVPMTTRLFRYYAGWADKIQGLTAPAD-----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLK 237 (456)
Q Consensus 163 ~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlk 237 (456)
+. |+..+++.++|++++.+.+.+...+.+ .+...+.+++|+|||++|+|||||+...++++++||++||+||+|
T Consensus 79 ~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~K 157 (456)
T cd07145 79 RV-EVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVK 157 (456)
T ss_pred HH-HHHHHHHHHHHHHHHHHHhcCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEE
Confidence 75 999999999999988776665543322 134567889999999999999999999999999999999999999
Q ss_pred cCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCC
Q 012802 238 TAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 317 (456)
Q Consensus 238 ps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~ 317 (456)
||+.+|+++..+++++.++|+|+|++|+++|++.+.+..|+.|++++.|.||||+.+|+.|++.+++ +++|+++|+|||
T Consensus 158 ps~~~p~~~~~l~~~~~~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~-~~~~v~lElgG~ 236 (456)
T cd07145 158 PSSNTPLTAIELAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGG-TGKKVALELGGS 236 (456)
T ss_pred CCccchHHHHHHHHHHHHcCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCceEEecCCC
Confidence 9999999999999999999999999999999777889999999999999999999999999999987 889999999999
Q ss_pred CceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHH
Q 012802 318 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 397 (456)
Q Consensus 318 ~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~ 397 (456)
||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+++++++||+++..++++
T Consensus 237 n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~ 316 (456)
T cd07145 237 DPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVER 316 (456)
T ss_pred CeeEECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCcCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 398 ILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 398 ~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+.++|++++++|+++++||... .|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 317 ~~~~i~~a~~~ga~vl~gg~~~--~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~ 373 (456)
T cd07145 317 MENLVNDAVEKGGKILYGGKRD--EGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVK 373 (456)
T ss_pred HHHHHHHHHHCCCEEEeCCCCC--CCeEECCEeecCCCCCChHhhCCCCCceEEEEEEC
Confidence 9999999999999999999753 38999999999999999999999999999999996
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. |
| >cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-77 Score=622.96 Aligned_cols=369 Identities=47% Similarity=0.779 Sum_probs=349.1
Q ss_pred ecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhcc
Q 012802 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165 (456)
Q Consensus 86 ~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ 165 (456)
+||+||+++++++.++.+|++++++.|++||+.+.|+++|.++|.++|+++++.|++++++|++++++|+|||+.+++ .
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ 80 (454)
T cd07118 2 RSPAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPISQAR-G 80 (454)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-H
Confidence 589999999999999999999999999999984459999999999999999999999999999999999999999987 5
Q ss_pred chHHHHHHHHHHHHHhHhhcCcccCC-CCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChh
Q 012802 166 EVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244 (456)
Q Consensus 166 ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~ 244 (456)
|+..+++.++|++.+.+++.+...+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus 81 ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~~p~ 160 (454)
T cd07118 81 EIEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSG 160 (454)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCCCCcH
Confidence 99999999999999877776544332 23445678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEecc
Q 012802 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324 (456)
Q Consensus 245 ~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~ 324 (456)
++..++++|.++|+|+|++|++++++.+.+..|..|++++.|.||||+.+|+.|++.++. +++|+++|+|||||+||++
T Consensus 161 ~~~~l~~~~~~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~n~~iV~~ 239 (454)
T cd07118 161 TTLMLAELLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAAR-NLKKVSLELGGKNPQIVFA 239 (454)
T ss_pred HHHHHHHHHHhcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCCcEEeccCCCCceEECC
Confidence 999999999999999999999999777789999999999999999999999999999987 8999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHH
Q 012802 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 404 (456)
Q Consensus 325 daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~ 404 (456)
|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|+++++++||++++.+++++.++|++
T Consensus 240 dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~p~~~~~~~gpli~~~~~~~~~~~i~~ 319 (454)
T cd07118 240 DADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYVDA 319 (454)
T ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCcCCCCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhCCCEEEeCCcccC-CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 405 GVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 405 a~~~Ga~v~~gg~~~~-~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++++|+++++||.... ..|+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 320 a~~~ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~ 372 (454)
T cd07118 320 GRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFD 372 (454)
T ss_pred HHhCCCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEEC
Confidence 9999999999997653 368999999999999999999999999999999986
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. |
| >PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-78 Score=632.74 Aligned_cols=378 Identities=50% Similarity=0.801 Sum_probs=357.7
Q ss_pred eeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHH
Q 012802 74 FVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETW 153 (456)
Q Consensus 74 ~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~ 153 (456)
|+.+.+ ++++++||.||++|++++.++.+|++++++.|++||+ .|+.++..+|.++|+++++.|+++.++|++++++
T Consensus 1 w~~~~~-~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~ 77 (462)
T PF00171_consen 1 WVSSES-ETFDVINPATGEVIGEVPSATAEDVDRAVEAARAAFK--EWSKLPAAERARILERFADLLEERRDELAELIAL 77 (462)
T ss_dssp EEE-TS-SEEEEEETTTECEEEEEEEBSHHHHHHHHHHHHHHHH--HHTTSSHHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CcCCCC-CEEcCCCCCCcCEEEEEcCCCHHHHHHHHHHHHHHHH--hhhhhhhhhHHHHHHHHHHHHhhccccccccccc
Confidence 777655 7799999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred hcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCE
Q 012802 154 DNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 233 (456)
Q Consensus 154 e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~ 233 (456)
|+|||+.+++. |+..+++.++|++++++++.+...+.+.+...++.++|+|||++|+|||||+..+++++++||++||+
T Consensus 78 e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~ 156 (462)
T PF00171_consen 78 ETGKPIAEARG-EVDRAIDFLRYYADAARKLAGEVLPSDPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPALAAGNT 156 (462)
T ss_dssp HHTSSHHHHHH-HHHHHHHHHHHHHHHHHHHTEEEEEESTTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHHHTT-E
T ss_pred ccccccccccc-hhhhhhhhhhhhhhcccceehhhcccccccccccccccccceeecccccccccccccchhhhhccccc
Confidence 99999999987 99999999999999999877765555568889999999999999999999999999999999999999
Q ss_pred EEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEe
Q 012802 234 IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLE 313 (456)
Q Consensus 234 VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~le 313 (456)
||+|||+.+|+++..+++++.++|+|+|++|++++++.+.+..|+.|++++.|.||||+++|+.|.+.+++ +++|+++|
T Consensus 157 VVlkps~~~~~~~~~l~~~~~~AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~-~~~~v~le 235 (462)
T PF00171_consen 157 VVLKPSEQAPLTALLLAELLEEAGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAAK-NLKPVVLE 235 (462)
T ss_dssp EEEEEBTTSHHHHHHHHHHHHHHTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHHT-TTSEEEEE
T ss_pred ceeeeccccccccccchhhccccccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhccc-cccccccc
Confidence 99999999999999999999999999999999999888999999999999999999999999999999886 88999999
Q ss_pred cCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHH
Q 012802 314 LGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSE 393 (456)
Q Consensus 314 lgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~ 393 (456)
+||+||+||++|||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..
T Consensus 236 lgG~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~~gpl~~~~ 315 (462)
T PF00171_consen 236 LGGKNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIYDEFVEALKERVAKLRVGDPLDESTDVGPLISKA 315 (462)
T ss_dssp ECEEEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHTSEBSSTTSTTCSBCHCSSHH
T ss_pred ccccceeeEecccccccccccccchhcccccccccccccccccccccchhhhhhhhccccccccCCccccccccccccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhCCCEEEeCC---cccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 394 QFEKILKYIRSGVDGGAKLETGG---ERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 394 ~~~~~~~~i~~a~~~Ga~v~~gg---~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++++.++|++++.+||++++|| ......|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 316 ~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 381 (462)
T PF00171_consen 316 QRERVKALIEDAVAEGAKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYD 381 (462)
T ss_dssp HHHHHHHHHHHHHHTTSEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEES
T ss_pred hhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccceecccc
Confidence 99999999999999999999999 2345689999999999999999999999999999999996
|
2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A .... |
| >PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-77 Score=625.65 Aligned_cols=382 Identities=32% Similarity=0.458 Sum_probs=355.6
Q ss_pred CccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 012802 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (456)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (456)
...++||||+|+.+.++++++++||.||+++++++.++.+|++++++.|++||+ .|+.++..+|.++|+++++.|+++
T Consensus 14 ~~~~~~i~G~~~~~~~~~~~~~~~P~t~~~i~~~~~a~~~dv~~av~~A~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~ 91 (496)
T PLN00412 14 DVYKYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAAQK--AWAKTPLWKRAELLHKAAAILKEH 91 (496)
T ss_pred cccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHh
Confidence 446889999999766678899999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCc--ccC-----CC-CCceEEEEEccceEEEEEcCcCh
Q 012802 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL--TAP-----AD-GPYHVQTLHEPIGVAGQIIPWNF 215 (456)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~--~~~-----~~-~~~~~~~~~~P~GVv~~i~p~n~ 215 (456)
+++|++++++|+|||..++. .|+..+++.++|++..+.+..+. ..+ .. .+...+++++|+|||++|+||||
T Consensus 92 ~~el~~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~ 170 (496)
T PLN00412 92 KAPIAECLVKEIAKPAKDAV-TEVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNY 170 (496)
T ss_pred HHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecceEEEEECCCCc
Confidence 99999999999999999987 59999999999999876655322 111 11 12345688999999999999999
Q ss_pred hHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHH
Q 012802 216 PLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG 295 (456)
Q Consensus 216 P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g 295 (456)
|+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|++++++.+.+..|..|++|+.|.|||| .+|
T Consensus 171 P~~~~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs-~~g 249 (496)
T PLN00412 171 PVNLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTG 249 (496)
T ss_pred hHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHhCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeCh-HHH
Confidence 9999999999999999999999999999999999999999999999999999877788999999999999999999 999
Q ss_pred HHHHHHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcc
Q 012802 296 KIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 375 (456)
Q Consensus 296 ~~i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~ 375 (456)
+.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus 250 ~~v~~~a~---~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~ 326 (496)
T PLN00412 250 IAISKKAG---MVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLT 326 (496)
T ss_pred HHHHHHhC---CCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHHHHHHHHHHHHHHhCc
Confidence 99998874 689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEe
Q 012802 376 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 455 (456)
Q Consensus 376 ~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~ 455 (456)
+|+|.+ ++++||+++..+++++.++|++++.+|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|
T Consensus 327 ~g~p~~-~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~~---~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~ 402 (496)
T PLN00412 327 VGPPED-DCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKR---EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRI 402 (496)
T ss_pred cCCCcc-cCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCeEEecEEEeCCCCCCHHHhCcCCCCeEEEEEe
Confidence 999987 789999999999999999999999999999998753 5899999999999999999999999999999999
Q ss_pred C
Q 012802 456 K 456 (456)
Q Consensus 456 ~ 456 (456)
+
T Consensus 403 ~ 403 (496)
T PLN00412 403 N 403 (496)
T ss_pred C
Confidence 6
|
|
| >PRK11903 aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-77 Score=628.11 Aligned_cols=382 Identities=25% Similarity=0.347 Sum_probs=343.9
Q ss_pred cCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhc-ccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 012802 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAF-DEGPWPRMTAYERSKIILRFADLLERHN 144 (456)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~-~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (456)
.++||||+|+.+ ++.+++++||+||+++++++. +.+|+++|++.|++|+ + .|+++|..+|.++|+++++.|++++
T Consensus 5 ~~~~i~G~~~~~-~~~~~~~~nP~tge~l~~v~~-~~~dv~~Av~aA~~A~~~--~W~~~~~~eR~~~L~~~a~~l~~~~ 80 (521)
T PRK11903 5 LANYVAGRWQAG-SGAGTPLFDPVTGEELVRVSA-TGLDLAAAFAFAREQGGA--ALRALTYAQRAALLAAIVKVLQANR 80 (521)
T ss_pred hhhhCCCEEEcC-CCCeeeeECCCCCCEEEEecC-ChHHHHHHHHHHHHhhhh--hhhhCCHHHHHHHHHHHHHHHHHHH
Confidence 357999999975 357899999999999999997 8899999999999995 7 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCC---------CCceEEEEEcc-ceEEEEEcCcC
Q 012802 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD---------GPYHVQTLHEP-IGVAGQIIPWN 214 (456)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~---------~~~~~~~~~~P-~GVv~~i~p~n 214 (456)
++|++++++|+|||+.+++. |+..+++.++||+.+++.+.+...... .....+..++| +|||++|+|||
T Consensus 81 ~ela~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN 159 (521)
T PRK11903 81 DAYYDIATANSGTTRNDSAV-DIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFN 159 (521)
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECCcc
Confidence 99999999999999999875 999999999999998876654322111 12234677899 69999999999
Q ss_pred hhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcC-CCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChH
Q 012802 215 FPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 293 (456)
Q Consensus 215 ~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aG-lP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~ 293 (456)
||+...++++++||++||+||+|||+.+|+++..+++++.++| +|+|++|+|+|++.+++..| +++|+|+||||++
T Consensus 160 ~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~ag~lP~gv~~~v~g~~~~~~~~l---~~v~~v~fTGS~~ 236 (521)
T PRK11903 160 FPAWGLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCGSSAGLLDHL---QPFDVVSFTGSAE 236 (521)
T ss_pred hHHHHHHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHHhCCCCcCceEEeeCCchHHHhcc---cCCCEEEEECCHH
Confidence 9999999999999999999999999999999999999999999 99999999998665554444 7899999999999
Q ss_pred HHHHHHHHHh-hCCCCcEEEecCCCCceEeccCCC-----HHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHH
Q 012802 294 TGKIVLQLAA-KSNLKPVTLELGGKSPFIVCEDAD-----VDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 367 (456)
Q Consensus 294 ~g~~i~~~aa-~~~~~pv~lelgG~~~~iV~~daD-----~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l 367 (456)
+|+.|++.++ ..+++|+++|+|||||+||++||| ++.+++.+++++|.|+||.|++++|+|||+++||+|+++|
T Consensus 237 ~G~~v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~L 316 (521)
T PRK11903 237 TAAVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAEAL 316 (521)
T ss_pred HHHHHHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEEehhHHHHHHHHH
Confidence 9999999753 237899999999999999999999 5999999999999999999999999999999999999999
Q ss_pred HHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCccc------CCCCceEecEEEeeCCC--CCc
Q 012802 368 NALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL------GAKGYYIKPTVFTGVKD--DML 439 (456)
Q Consensus 368 ~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~------~~~g~~~~PTvl~~v~~--~~~ 439 (456)
+++++++++|+|+++++++||++++.+++++.++|+.. .+|+++++||... .++|+|++||||.++++ +|.
T Consensus 317 ~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~~-~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~~~ 395 (521)
T PRK11903 317 AARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAAL-RAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATA 395 (521)
T ss_pred HHHHHhccCCCCCCCcCccCCCCCHHHHHHHHHHHHHH-hcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCccch
Confidence 99999999999999999999999999999999999964 5799999999652 23589999999997655 478
Q ss_pred ccccccccceeEEEEeC
Q 012802 440 IAKDEIFGPVQSILKYK 456 (456)
Q Consensus 440 i~~~EifGPvl~v~~~~ 456 (456)
+++||+||||++|++|+
T Consensus 396 i~~eE~FGPvl~V~~~~ 412 (521)
T PRK11903 396 VHDVEVFGPVATLLPYR 412 (521)
T ss_pred HHhCcccCCeEEEEeeC
Confidence 99999999999999996
|
|
| >cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-77 Score=622.78 Aligned_cols=367 Identities=42% Similarity=0.717 Sum_probs=347.8
Q ss_pred eecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhc
Q 012802 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (456)
Q Consensus 85 v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 164 (456)
++||.||+++++++.++.+|++++++.|++||. .|+.++.++|.++|+++++.|+++.++|++++++|+|||+.++.
T Consensus 1 ~~~p~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~- 77 (456)
T cd07107 1 VINPATGQVLARVPAASAADVDRAVAAARAAFP--EWRATTPLERARMLRELATRLREHAEELALIDALDCGNPVSAML- 77 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-
Confidence 479999999999999999999999999999999 99999999999999999999999999999999999999999976
Q ss_pred cchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChh
Q 012802 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244 (456)
Q Consensus 165 ~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~ 244 (456)
.|+..+++.++|++++...+.+...+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus 78 ~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~ 157 (456)
T cd07107 78 GDVMVAAALLDYFAGLVTELKGETIPVGGRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPL 157 (456)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccccCCCCceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCChH
Confidence 59999999999999888777666555444556789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEecc
Q 012802 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324 (456)
Q Consensus 245 ~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~ 324 (456)
++..+++++.++ +|+|++|++++++.+.+..|+.|++++.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++
T Consensus 158 ~~~~l~~~~~~~-lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~-~~~~~~lElgG~~p~iV~~ 235 (456)
T cd07107 158 SALRLAELAREV-LPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAE-GIKHVTLELGGKNALIVFP 235 (456)
T ss_pred HHHHHHHHHHHh-CCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-CCCeEEEECCCCCeEEECC
Confidence 999999999995 99999999998777788999999999999999999999999999887 8999999999999999999
Q ss_pred CCCHHHHHHHHHHHH-hccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHH
Q 012802 325 DADVDKAAELAHYAL-FFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 403 (456)
Q Consensus 325 daD~d~aa~~i~~~~-~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~ 403 (456)
|||+|.|++.+++++ |.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.+++++.++|+
T Consensus 236 dadl~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~ 315 (456)
T cd07107 236 DADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYID 315 (456)
T ss_pred CCCHHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCcccCHHHHHHHHHHHH
Confidence 999999999999995 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 404 SGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 404 ~a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 316 ~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~ 372 (456)
T cd07107 316 SAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWR 372 (456)
T ss_pred HHHHCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeC
Confidence 99999999999997532 358999999999999999999999999999999996
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. |
| >cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-77 Score=622.79 Aligned_cols=369 Identities=52% Similarity=0.920 Sum_probs=351.8
Q ss_pred eecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhc
Q 012802 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (456)
Q Consensus 85 v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 164 (456)
++||+||+++++++.++.++++++++.|++||. .|+.++.++|.++|+++++.|++++++|++++++|+|||..++..
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~ 78 (453)
T cd07115 1 TLNPATGELIARVAQASAEDVDAAVAAARAAFE--AWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIRAARR 78 (453)
T ss_pred CCCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence 369999999999999999999999999999999 999999999999999999999999999999999999999999876
Q ss_pred cchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChh
Q 012802 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244 (456)
Q Consensus 165 ~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~ 244 (456)
.|+..+++.++|++.+.++..+...+...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus 79 ~ev~~~i~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~ 158 (453)
T cd07115 79 LDVPRAADTFRYYAGWADKIEGEVIPVRGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPL 158 (453)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCCcH
Confidence 69999999999999998887665544444566789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEecc
Q 012802 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324 (456)
Q Consensus 245 ~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~ 324 (456)
++..+.++|.++|+|+|++++|++++.+.++.|..|+++|.|+||||+.+|+.|++.++. +++|+++|+||++|+||++
T Consensus 159 ~~~~l~~~~~~aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~-~~~~~~lElgG~~p~iV~~ 237 (453)
T cd07115 159 SALRIAELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAG-NLKRVSLELGGKSANIVFA 237 (453)
T ss_pred HHHHHHHHHHhcCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCCeEEEecCCCCceEECC
Confidence 999999999999999999999999777788999999999999999999999999999887 8999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHH
Q 012802 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 404 (456)
Q Consensus 325 daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~ 404 (456)
|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++
T Consensus 238 dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~ 317 (453)
T cd07115 238 DADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDV 317 (453)
T ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 405 GVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 405 a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++++|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 318 a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~ 369 (453)
T cd07115 318 GREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFR 369 (453)
T ss_pred HHHCCCEEEeCCCCCCCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeC
Confidence 9999999999997654468999999999999999999999999999999986
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. |
| >cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-77 Score=622.81 Aligned_cols=368 Identities=47% Similarity=0.800 Sum_probs=348.5
Q ss_pred eecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhc
Q 012802 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (456)
Q Consensus 85 v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 164 (456)
++||+||+++++++.++.+|++++++.|++||. .|++++.++|.++|+++++.|+++.++|++++++|+|||+.++..
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 78 (456)
T cd07110 1 VINPATEATIGEIPAATAEDVDAAVRAARRAFP--RWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDEAAW 78 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence 479999999999999999999999999999999 999999999999999999999999999999999999999999875
Q ss_pred cchHHHHHHHHHHHHHhHhhcC---cccCCC-CCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCC
Q 012802 165 TEVPMTTRLFRYYAGWADKIQG---LTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 240 (456)
Q Consensus 165 ~ev~~~~~~l~~~a~~~~~~~~---~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~ 240 (456)
|+..+++.++|++++.+++.. ...+.. .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 79 -ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~ 157 (456)
T cd07110 79 -DVDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSE 157 (456)
T ss_pred -HHHHHHHHHHHHHHHHHHhhccCCccccCCCCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcc
Confidence 999999999999998887642 222222 355678999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCce
Q 012802 241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPF 320 (456)
Q Consensus 241 ~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~ 320 (456)
.+|+++..+++++.++|+|+|++|+|++++.+.+..|+.|++++.|.||||+.+|+.|++.+++ +++|+++|+|||||+
T Consensus 158 ~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~aa~-~~~~~~lElgG~~~~ 236 (456)
T cd07110 158 LTSLTELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQ-DIKPVSLELGGKSPI 236 (456)
T ss_pred cchHHHHHHHHHHHHcCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCeEEEEcCCCCee
Confidence 9999999999999999999999999999777789999999999999999999999999999887 889999999999999
Q ss_pred EeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHH
Q 012802 321 IVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 400 (456)
Q Consensus 321 iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~ 400 (456)
||++|+|++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+++++++||++++.+++++.+
T Consensus 237 iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~ 316 (456)
T cd07110 237 IVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLS 316 (456)
T ss_pred EECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCEEEeCCcccC--CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 401 YIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 401 ~i~~a~~~Ga~v~~gg~~~~--~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++++++.+|+++++||.... ++|+|++|||+.+++++|.++++|+||||++|++|+
T Consensus 317 ~v~~a~~~Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~ 374 (456)
T cd07110 317 FIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFA 374 (456)
T ss_pred HHHHHHhCCCEEEeCCCcccccCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecC
Confidence 99999999999999997643 468999999999999999999999999999999985
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. |
| >TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-77 Score=624.86 Aligned_cols=374 Identities=32% Similarity=0.473 Sum_probs=349.4
Q ss_pred CccCceecCEeeeCCCCCeeeeecCCCC-CEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHh
Q 012802 64 DYTQLLINGQFVDSASGKTFPTLDPRTG-DVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (456)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg-e~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~ 142 (456)
.+.++||||+|+. ++++++++||.|+ ++|++++.++.+|++++++.|++||+ .|++++..+|.++|+++++.|++
T Consensus 36 ~~~~~~i~g~~~~--~~~~~~~~nP~t~~e~i~~~~~~~~~dv~~av~~A~~a~~--~W~~~~~~~R~~~L~~~a~~l~~ 111 (500)
T TIGR01238 36 WQAAPIIGHSYKA--DGEAQPVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFP--TWNATPAKERAAKLDRLADLLEL 111 (500)
T ss_pred eecCceECCEEec--CCCeEEeeCCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHh
Confidence 3469999999986 5678999999995 89999999999999999999999999 99999999999999999999999
Q ss_pred cHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHH
Q 012802 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (456)
Q Consensus 143 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (456)
++++|++++++|+|||+.++.. |+..+++.++|+++..+...+. ..++|+|||++|+|||||+...++
T Consensus 112 ~~~ela~~~~~e~Gk~~~~a~~-ev~~~i~~l~~~a~~~~~~~~~-----------~~~~P~GVV~~I~pwN~P~~~~~~ 179 (500)
T TIGR01238 112 HMPELMALCVREAGKTIHNAIA-EVREAVDFCRYYAKQVRDVLGE-----------FSVESRGVFVCISPWNFPLAIFTG 179 (500)
T ss_pred HHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCc-----------eeccCcceEEEECCCchHHHHHHH
Confidence 9999999999999999999864 9999999999999887654321 358999999999999999999999
Q ss_pred HHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHH
Q 012802 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (456)
Q Consensus 223 ~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~a 302 (456)
++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.+.+..|..|+++|.|+||||+.+|+.|++.+
T Consensus 180 ~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~~~a 259 (500)
T TIGR01238 180 QISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTL 259 (500)
T ss_pred HHHHHHHcCCEEEEeCCCCccHHHHHHHHHHHHcCCCCCceEEEecCcchHHHHHhcCCCcCeEEEECCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999987767899999999999999999999999999999
Q ss_pred hhCCC---CcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCC
Q 012802 303 AKSNL---KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379 (456)
Q Consensus 303 a~~~~---~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p 379 (456)
++ ++ +|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|
T Consensus 260 a~-~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~vG~p 338 (500)
T TIGR01238 260 AQ-REDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVGVP 338 (500)
T ss_pred hh-cccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceeEEcHhhHHHHHHHHHHHHHhCCCCCC
Confidence 87 44 799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCc---ccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 380 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE---RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 380 ~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~---~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
.+++++|||++++.+++++.++|+++++.|++++.++. ....+|+|++|||+.+ ++|.+++||+||||++|++|+
T Consensus 339 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~~~~~~~g~f~~PTvl~~--~~~~~~~eE~FgPvl~v~~~~ 416 (500)
T TIGR01238 339 HLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGTFVAPTLFEL--DDIAELSEEVFGPVLHVVRYK 416 (500)
T ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCCCCCCCCCeeEcCEEEcc--CCchHhhCCCcCCEEEEEEeC
Confidence 99999999999999999999999999999999885432 1123699999999974 788999999999999999985
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase. |
| >cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-77 Score=621.48 Aligned_cols=369 Identities=41% Similarity=0.636 Sum_probs=349.0
Q ss_pred eecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCC-CCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhh
Q 012802 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP-RMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163 (456)
Q Consensus 85 v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~-~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~ 163 (456)
++||+||+++++++.++.+|++++++.|++||+ .|+ ++|..+|.++|+++++.|+++.++|++++++|+|||+.++.
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~ 78 (459)
T cd07089 1 VINPATEEVIGTAPDAGAADVDAAIAAARRAFD--TGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVMTAR 78 (459)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence 479999999999999999999999999999999 898 99999999999999999999999999999999999997766
Q ss_pred ccchHHHHHHHHHHHHHhHhhcCccc-CC----CCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeec
Q 012802 164 QTEVPMTTRLFRYYAGWADKIQGLTA-PA----DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 238 (456)
Q Consensus 164 ~~ev~~~~~~l~~~a~~~~~~~~~~~-~~----~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkp 238 (456)
..|+..+++.++|+++.+++..+... +. ..+...+++++|+|||++|+|||||+...++++++||++||+||+||
T Consensus 79 ~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKp 158 (459)
T cd07089 79 AMQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKP 158 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEEC
Confidence 66999999999999998887655432 21 12456789999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCC
Q 012802 239 AEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS 318 (456)
Q Consensus 239 s~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~ 318 (456)
|+.+|.++..+.++|.++|+|+|++|+++|++.+++..|..|++++.|.||||+.+|+.|++.+++ +++|+++|+||||
T Consensus 159 s~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~n 237 (459)
T cd07089 159 APDTPLSALLLGEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAA-TLKRVLLELGGKS 237 (459)
T ss_pred CCCChHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCCcEEEECCCCC
Confidence 999999999999999999999999999999777789999999999999999999999999999987 8899999999999
Q ss_pred ceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHH
Q 012802 319 PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 398 (456)
Q Consensus 319 ~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~ 398 (456)
|+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..+++++
T Consensus 238 ~~iV~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~v 317 (459)
T cd07089 238 ANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRV 317 (459)
T ss_pred eeEECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCEEEeCCcccC--CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 399 LKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 399 ~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
.+++++++++|+++++||.... ++|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 318 ~~~i~~a~~~Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~ 377 (459)
T cd07089 318 EGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYD 377 (459)
T ss_pred HHHHHHHHHCCCEEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccC
Confidence 9999999999999999997543 368999999999999999999999999999999985
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. |
| >cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-77 Score=625.94 Aligned_cols=383 Identities=32% Similarity=0.480 Sum_probs=357.5
Q ss_pred cCceecCEeeeCCCCCeeeeecCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 012802 66 TQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (456)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (456)
.-.||+|+|+ .++++++++||.| |+++++++.++.+|++++++.|++|++ .|+.++.++|.++|+++++.|++++
T Consensus 33 ~~p~i~g~~~--~~~~~~~v~~P~t~g~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 108 (518)
T cd07125 33 AIPIINGEET--ETGEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAFA--GWSATPVEERAEILEKAADLLEANR 108 (518)
T ss_pred cCceECCEEe--eCCCeEEEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhH
Confidence 4568999998 3578899999999 999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcc-cCCCCCceEEEEEccceEEEEEcCcChhHHHHHHH
Q 012802 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT-APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (456)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~-~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (456)
++|++++++|+|||+.+++. |+..+++.++|++..+++..+.. .+...+...+.+++|+|||++|+|||||+...+++
T Consensus 109 ~~la~~~~~e~Gk~~~~a~~-ev~~~i~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~GVV~~I~p~N~P~~~~~~~ 187 (518)
T cd07125 109 GELIALAAAEAGKTLADADA-EVREAIDFCRYYAAQARELFSDPELPGPTGELNGLELHGRGVFVCISPWNFPLAIFTGQ 187 (518)
T ss_pred HHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCceeEEEEecccEEEEECCcchHHHHHHHH
Confidence 99999999999999999874 99999999999999888765432 33333566789999999999999999999999999
Q ss_pred HhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHh
Q 012802 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (456)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa 303 (456)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.+.+..|..|+++|.|+||||+.+|+.|++.++
T Consensus 188 i~~ALaaGN~VVlKps~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa 267 (518)
T cd07125 188 IAAALAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALA 267 (518)
T ss_pred HHHHHHcCCEEEEeCCCcCcHHHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999977678899999999999999999999999999887
Q ss_pred hC--CCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCC
Q 012802 304 KS--NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381 (456)
Q Consensus 304 ~~--~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~ 381 (456)
++ .++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++.++++|+|.+
T Consensus 268 ~~~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~ 347 (518)
T cd07125 268 ERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKVGDPWD 347 (518)
T ss_pred hccCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcchhHHHHHHHHHHHHhcCCccCCCC
Confidence 53 3899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 382 ~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++++||++++.+++++.++|++++. ++++++||.....+|+|++|||+.++ +|.+++||+||||++|++|+
T Consensus 348 ~~~~~gpli~~~~~~~v~~~i~~a~~-~~~vl~gg~~~~~~g~~~~Ptvl~~v--~~~i~~eE~FgPVl~v~~~~ 419 (518)
T cd07125 348 LSTDVGPLIDKPAGKLLRAHTELMRG-EAWLIAPAPLDDGNGYFVAPGIIEIV--GIFDLTTEVFGPILHVIRFK 419 (518)
T ss_pred CCCCcCCCcCHHHHHHHHHHHHHHHh-CCEEEeCCCcCCCCCeEEccEEEeec--CChHhhCcccCCeEEEEEeC
Confidence 99999999999999999999999987 56899998753336999999999988 89999999999999999996
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. |
| >cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-77 Score=618.05 Aligned_cols=365 Identities=32% Similarity=0.461 Sum_probs=343.3
Q ss_pred eeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCC-CCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhh
Q 012802 84 PTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP-WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162 (456)
Q Consensus 84 ~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~-W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 162 (456)
+++||+||+++++++.++.+|++++++.|++||+ . |+.++.++|.++|+++++.|+++.++|++++++|+|||+.++
T Consensus 2 ~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a 79 (455)
T cd07148 2 EVVNPFDLKPIGEVPTVDWAAIDKALDTAHALFL--DRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPLVDA 79 (455)
T ss_pred CccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHh--hcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 5789999999999999999999999999999998 6 567999999999999999999999999999999999999998
Q ss_pred hccchHHHHHHHHHHHHHhHhhcCcccCCC-----CCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEee
Q 012802 163 AQTEVPMTTRLFRYYAGWADKIQGLTAPAD-----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLK 237 (456)
Q Consensus 163 ~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlk 237 (456)
.. |+..+++.++|++..+++..+...+.. .+...++.++|+|||++|+|||||+...++++++||++||+||+|
T Consensus 80 ~~-ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlK 158 (455)
T cd07148 80 KV-EVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVK 158 (455)
T ss_pred HH-HHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEee
Confidence 74 999999999999998887765433321 234578899999999999999999999999999999999999999
Q ss_pred cCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCC
Q 012802 238 TAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 317 (456)
Q Consensus 238 ps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~ 317 (456)
||+.+|+++..++++|.++|+|+|++|+++++ .+.+..|+.|++||.|.||||+.+|+.|++.++. + +|+++|+|||
T Consensus 159 ps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~-~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa~-~-~~~~lElGG~ 235 (455)
T cd07148 159 PALATPLSCLAFVDLLHEAGLPEGWCQAVPCE-NAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAP-G-TRCALEHGGA 235 (455)
T ss_pred CCCcccHHHHHHHHHHHHcCCCcCcEEEEeCC-hHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhc-C-CcEEEecCCC
Confidence 99999999999999999999999999999985 4578999999999999999999999999998875 4 8999999999
Q ss_pred CceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHH
Q 012802 318 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 397 (456)
Q Consensus 318 ~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~ 397 (456)
||+||++|||+|.|++.|++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+++++++||++++.++++
T Consensus 236 ~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~ 315 (455)
T cd07148 236 APVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDR 315 (455)
T ss_pred CceEECCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCcCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 398 ILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 398 ~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+.++|++++++|+++++||... .|+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 316 ~~~~i~~a~~~Ga~vl~gg~~~--~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~ 372 (455)
T cd07148 316 VEEWVNEAVAAGARLLCGGKRL--SDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYD 372 (455)
T ss_pred HHHHHHHHHhCCCEEEeCCccC--CCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecC
Confidence 9999999999999999999763 47899999999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-77 Score=618.74 Aligned_cols=367 Identities=45% Similarity=0.759 Sum_probs=347.8
Q ss_pred eecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCC-CCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhh
Q 012802 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP-RMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163 (456)
Q Consensus 85 v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~-~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~ 163 (456)
++||+||+++++++.++.+|++++++.|++|++ .|. .++.++|.++|+++++.|++++++|++++++|+|||+.+++
T Consensus 1 ~~~P~tg~~i~~~~~~~~~dv~~av~~a~~A~~--~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~ 78 (454)
T cd07109 1 VFDPSTGEVFARIARGGAADVDRAVQAARRAFE--SGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLTQAR 78 (454)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH
Confidence 479999999999999999999999999999998 776 99999999999999999999999999999999999999987
Q ss_pred ccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCCh
Q 012802 164 QTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243 (456)
Q Consensus 164 ~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p 243 (456)
. |+..+++.++|++++.++..+...+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 79 ~-ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p 157 (454)
T cd07109 79 A-DVEAAARYFEYYGGAADKLHGETIPLGPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAP 157 (454)
T ss_pred H-HHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCh
Confidence 4 999999999999998888776555433456788999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEec
Q 012802 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 323 (456)
Q Consensus 244 ~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~ 323 (456)
+++..+++++.++|+|+|++|++++++.+.+..|+.|+++|.|+||||+.+|+.|++.+++ +++|+++|+|||||+||+
T Consensus 158 ~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~-~~~p~~lElgG~~~~iV~ 236 (454)
T cd07109 158 LTALRLAELAEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAE-NVVPVTLELGGKSPQIVF 236 (454)
T ss_pred HHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCcEEEECCCCCceEEC
Confidence 9999999999999999999999998777789999999999999999999999999999887 889999999999999999
Q ss_pred cCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHH
Q 012802 324 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 403 (456)
Q Consensus 324 ~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~ 403 (456)
+|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+ .+++||++++.+++++.++|+
T Consensus 237 ~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~-~~~~gpli~~~~~~~~~~~i~ 315 (454)
T cd07109 237 ADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLE-DPDLGPLISAKQLDRVEGFVA 315 (454)
T ss_pred CCCCHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCcc-cCcCCCccCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999986 689999999999999999999
Q ss_pred HHhhCCCEEEeCCcccC---CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 404 SGVDGGAKLETGGERLG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 404 ~a~~~Ga~v~~gg~~~~---~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++++|+++++||.... +.|+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 316 ~a~~~ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~ 371 (454)
T cd07109 316 RARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFD 371 (454)
T ss_pred HHHhCCCEEEeCCCcCcccCCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecC
Confidence 99999999999987532 368999999999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. |
| >cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-77 Score=619.98 Aligned_cols=367 Identities=45% Similarity=0.762 Sum_probs=348.8
Q ss_pred eecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhc
Q 012802 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (456)
Q Consensus 85 v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 164 (456)
++||.||+++++++.++.+|++++++.|++|+. .|+.++.++|.++|+++++.|+++.++|++++++|+|||+.++..
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 78 (457)
T cd07090 1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQK--EWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPIEEARV 78 (457)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence 479999999999999999999999999999999 999999999999999999999999999999999999999988764
Q ss_pred cchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChh
Q 012802 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244 (456)
Q Consensus 165 ~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~ 244 (456)
|+..+++.++|++++.+++.+...+...+...+++++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.
T Consensus 79 -ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~~~ 157 (457)
T cd07090 79 -DIDSSADCLEYYAGLAPTLSGEHVPLPGGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPL 157 (457)
T ss_pred -HHHHHHHHHHHHHHHHHHhCCeeeccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCCCcCcH
Confidence 9999999999999988877665544444667789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEecc
Q 012802 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324 (456)
Q Consensus 245 ~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~ 324 (456)
++..+.+++.++|+|+|++|++++++ +.+..|+.|++++.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++
T Consensus 158 ~~~~l~~~~~~aGlP~g~~~~v~g~~-~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~~~~~~lelgG~~p~iV~~ 235 (457)
T cd07090 158 TALLLAEILTEAGLPDGVFNVVQGGG-ETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAK-GIKHVTLELGGKSPLIIFD 235 (457)
T ss_pred HHHHHHHHHHHcCCCcccEEEEeCCh-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-cCCceEEecCCCCceEECC
Confidence 99999999999999999999999854 588999999999999999999999999999987 8999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHH
Q 012802 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 404 (456)
Q Consensus 325 daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~ 404 (456)
|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|+++++++||+++..+++++.++|++
T Consensus 236 dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~ 315 (457)
T cd07090 236 DADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIES 315 (457)
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhCCCEEEeCCcccC-----CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 405 GVDGGAKLETGGERLG-----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 405 a~~~Ga~v~~gg~~~~-----~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++++|+++++||.... ++|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 316 a~~~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~ 372 (457)
T cd07090 316 AKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFD 372 (457)
T ss_pred HHHCCCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEEC
Confidence 9999999999997532 358999999999999999999999999999999986
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. |
| >cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-77 Score=618.57 Aligned_cols=367 Identities=41% Similarity=0.666 Sum_probs=349.8
Q ss_pred eeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhh
Q 012802 83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162 (456)
Q Consensus 83 ~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 162 (456)
++++||+||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|+++.++|++++++|+|||+.++
T Consensus 1 ~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a 78 (451)
T cd07150 1 FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAFP--AWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTYGKA 78 (451)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHH
Confidence 46789999999999999999999999999999999 9999999999999999999999999999999999999999987
Q ss_pred hccchHHHHHHHHHHHHHhHhhcCcccCCC-CCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCC
Q 012802 163 AQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241 (456)
Q Consensus 163 ~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~ 241 (456)
.. |+..+++.+++++.+.++..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 79 ~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~ 157 (451)
T cd07150 79 WF-ETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEE 157 (451)
T ss_pred HH-HHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECCcc
Confidence 65 999999999999999887766544433 3556789999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceE
Q 012802 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321 (456)
Q Consensus 242 ~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~i 321 (456)
+|.++..++++|.++|+|+|++|++++++.+.+..|..|++||+|.||||+.+|+.|++.+++ +++|+++|+|||||+|
T Consensus 158 ~p~t~~~l~~~~~~ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~-~~~~~~lelGG~~~~i 236 (451)
T cd07150 158 TPVIGLKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGR-HLKKITLELGGKNPLI 236 (451)
T ss_pred CcHHHHHHHHHHHHhCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCCceEeecCCCCeeE
Confidence 999999999999999999999999998777889999999999999999999999999999987 8999999999999999
Q ss_pred eccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHH
Q 012802 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 401 (456)
Q Consensus 322 V~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~ 401 (456)
|++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||+++..+++++.++
T Consensus 237 V~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~ 316 (451)
T cd07150 237 VLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQ 316 (451)
T ss_pred ECCCCChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 402 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 402 i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++++.+|+++++||.. .|+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 317 i~~a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 368 (451)
T cd07150 317 VEDAVAKGAKLLTGGKY---DGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAK 368 (451)
T ss_pred HHHHHhCCCEEEeCCcc---CCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeC
Confidence 99999999999999964 48999999999999999999999999999999996
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. |
| >PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-76 Score=624.03 Aligned_cols=383 Identities=37% Similarity=0.544 Sum_probs=357.0
Q ss_pred cCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHH
Q 012802 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (456)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (456)
...+|.|.|- .++++++++||+||+++++++.++.+|++++++.|++|++ .|++++.++|.++|+++++.|+++.+
T Consensus 19 ~~~~~~~~~~--~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~ 94 (524)
T PRK09407 19 LRRLTARVDG--AAGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAAQR--AWAATPVRERAAVLLRFHDLVLENRE 94 (524)
T ss_pred HHHHHhhcCC--CCCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhHH
Confidence 4566777764 4678999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccC---CCCCceEEEEEccceEEEEEcCcChhHHHHHH
Q 012802 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP---ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (456)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~---~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (456)
+|++++++|+|||+.++. .|+..+++.++|++..+++..+.... .......+..++|+|||++|+|||||+...++
T Consensus 95 ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~~ 173 (524)
T PRK09407 95 ELLDLVQLETGKARRHAF-EEVLDVALTARYYARRAPKLLAPRRRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVS 173 (524)
T ss_pred HHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCccccccCCCCceEEEEEecceEEEEEeCCCChHHHHHH
Confidence 999999999999999876 49999999999999988776543221 11234678899999999999999999999999
Q ss_pred HHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHH
Q 012802 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (456)
Q Consensus 223 ~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~a 302 (456)
++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|++++.+.+..|++| ++.|+||||+.+|+.|++.+
T Consensus 174 ~~~~ALaaGN~VIlKPs~~tp~~~~~l~~ll~eaGlP~gvv~~v~g~~~~~~~~L~~~--~d~V~fTGs~~~g~~v~~~a 251 (524)
T PRK09407 174 DAIPALLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQA 251 (524)
T ss_pred HHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCcccEEEEecCCchHHHHHHhc--CCEEEEECCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999777788999976 78999999999999999998
Q ss_pred hhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCC
Q 012802 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 382 (456)
Q Consensus 303 a~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~ 382 (456)
++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++
T Consensus 252 a~-~~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~ 330 (524)
T PRK09407 252 GR-RLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAGYDY 330 (524)
T ss_pred Hh-cCCcEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCc
Confidence 87 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccC-CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 383 ~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++++||++++.+++++.+++++++++|+++++||.... .+|+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 331 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~ 405 (524)
T PRK09407 331 SADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVA 405 (524)
T ss_pred CCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeC
Confidence 99999999999999999999999999999999997532 358999999999999999999999999999999996
|
|
| >PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-77 Score=642.14 Aligned_cols=382 Identities=26% Similarity=0.344 Sum_probs=344.6
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 012802 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKA-FDEGPWPRMTAYERSKIILRFADLLERH 143 (456)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A-~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (456)
+.++||||+|+.+ ++++++++||.||+++++++.++ +|+++|++.|++| |+ .|++++..+|.++|+++++.|+++
T Consensus 4 ~~~~~i~G~~~~~-~~~~~~~~nP~tg~~i~~~~~~~-~dv~~Av~~A~~A~~~--~W~~~~~~eR~~~L~~~a~~l~~~ 79 (675)
T PRK11563 4 KLQSYVAGRWQTG-QGEGRPLHDAVTGEPVARVSSEG-LDFAAALAYAREVGGP--ALRALTFHERAAMLKALAKYLLER 79 (675)
T ss_pred cccceecCEEEcC-CCCceeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhhhh--hhhcCCHHHHHHHHHHHHHHHHHh
Confidence 3578999999975 56789999999999999999987 6999999999998 67 899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhc--------CcccCCC--CCceEEEEEccc-eEEEEEcC
Q 012802 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ--------GLTAPAD--GPYHVQTLHEPI-GVAGQIIP 212 (456)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~--------~~~~~~~--~~~~~~~~~~P~-GVv~~i~p 212 (456)
.++|++ +++|+|||+.+++. |+..+++.++||+.++++.. +...+.. .....+..++|+ |||++|+|
T Consensus 80 ~~ela~-l~~e~GK~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~GVv~~I~P 157 (675)
T PRK11563 80 KEELYA-LSAQTGATRRDSWI-DIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLSKGGTFAGRHILTPLEGVAVHINA 157 (675)
T ss_pred HHHHHH-HHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHhhhccccccccCCccccccCCCcccceEEEeecCceEEEECC
Confidence 999999 58999999999875 99999999999999876542 3222211 112256888997 99999999
Q ss_pred cChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcC-CCCCeEEEecCCchHHHHHHHcCCCccEEEEeCC
Q 012802 213 WNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGS 291 (456)
Q Consensus 213 ~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aG-lP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS 291 (456)
||||+...++++++||++||+||+|||+.+|+++..+++++.++| +|+|++|+|+|++. ..+..++.+++|.||||
T Consensus 158 wNfP~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~eaG~~P~gv~~vv~g~~~---~~~~~~~~i~~v~FTGS 234 (675)
T PRK11563 158 FNFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLICGSAG---DLLDHLDGQDVVTFTGS 234 (675)
T ss_pred CchHHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHcCCCCCCcEEEeeCCHH---HHhhcCCCCCEEEEECc
Confidence 999999999999999999999999999999999999999999999 99999999998532 34444568999999999
Q ss_pred hHHHHHHHHHHh-hCCCCcEEEecCCCCceEeccCCC-----HHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHH
Q 012802 292 TTTGKIVLQLAA-KSNLKPVTLELGGKSPFIVCEDAD-----VDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVE 365 (456)
Q Consensus 292 ~~~g~~i~~~aa-~~~~~pv~lelgG~~~~iV~~daD-----~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~ 365 (456)
+++|+.|++.++ ..+++|+++|||||||+||++||| +|.|++.+++++|.|+||.|++++|+|||+++||+|++
T Consensus 235 ~~~G~~i~~~~~a~~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~ 314 (675)
T PRK11563 235 AATAQKLRAHPNVVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAVIE 314 (675)
T ss_pred HHHHHHHHhhhhhhhCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEEeeHHHHHHHHH
Confidence 999999998632 238999999999999999999995 99999999999999999999999999999999999999
Q ss_pred HHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCccc-------CCCCceEecEEEeeCCC--
Q 012802 366 KANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL-------GAKGYYIKPTVFTGVKD-- 436 (456)
Q Consensus 366 ~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~-------~~~g~~~~PTvl~~v~~-- 436 (456)
+|+++++++++|+|+++++++||++++.+++++.++|++++++ |++++||... ..+|+|++||||.++++
T Consensus 315 ~l~~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~-a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~~~ 393 (675)
T PRK11563 315 ALRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPLE 393 (675)
T ss_pred HHHHHHhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhC-CEEEECCcccccccCCCCCCCeeECCEEEeccCchh
Confidence 9999999999999999999999999999999999999999998 9999999632 13699999999999998
Q ss_pred CCcccccccccceeEEEEeC
Q 012802 437 DMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 437 ~~~i~~~EifGPvl~v~~~~ 456 (456)
+|.+++||+||||++|++|+
T Consensus 394 ~~~i~~eEiFGPVl~V~~~~ 413 (675)
T PRK11563 394 APAVHDVEAFGPVSTLMPYD 413 (675)
T ss_pred hhhHhhccccCCceEEEecC
Confidence 57999999999999999986
|
|
| >cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-76 Score=617.27 Aligned_cols=382 Identities=36% Similarity=0.525 Sum_probs=360.7
Q ss_pred cCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHHHHHHHHhcH
Q 012802 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRM-TAYERSKIILRFADLLERHN 144 (456)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~-~~~~R~~~L~~~a~~l~~~~ 144 (456)
+++||||+|+.+. +++++++||+||+++++++.++.+|++++++.|++|++ .|+++ +.++|.++|+++++.|++++
T Consensus 2 ~~~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~~R~~~L~~~a~~l~~~~ 78 (473)
T cd07082 2 FKYLINGEWKESS-GKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGR--GWWPTMPLEERIDCLHKFADLLKENK 78 (473)
T ss_pred CCceECCEEecCC-CCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhcCCHHHHHHHHHHHHHHHHHHH
Confidence 4689999999764 68899999999999999999999999999999999999 99988 99999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCC-----CCceEEEEEccceEEEEEcCcChhHHH
Q 012802 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-----GPYHVQTLHEPIGVAGQIIPWNFPLLM 219 (456)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-----~~~~~~~~~~P~GVv~~i~p~n~P~~~ 219 (456)
++|++++++|+|||..++.. |+..+++.++|+++..+++.+...+.. .+...+.+++|+|||++|+|||||+..
T Consensus 79 ~el~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~ 157 (473)
T cd07082 79 EEVANLLMWEIGKTLKDALK-EVDRTIDYIRDTIEELKRLDGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNL 157 (473)
T ss_pred HHHHHHHHHHcCCcHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccccccccCCCceeEEEEecceEEEEECCcCcHHHH
Confidence 99999999999999999865 999999999999998887765543321 345678899999999999999999999
Q ss_pred HHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHH
Q 012802 220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299 (456)
Q Consensus 220 ~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~ 299 (456)
.++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+++++++++.+.+..|..|+++|.|+||||+++|+.|.
T Consensus 158 ~~~~i~~AL~aGN~vilKps~~~~~~~~~l~~~l~~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~ 237 (473)
T cd07082 158 TVSKLIPALIMGNTVVFKPATQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLK 237 (473)
T ss_pred HHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999997777899999999999999999999999999
Q ss_pred HHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCC
Q 012802 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379 (456)
Q Consensus 300 ~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p 379 (456)
+.++ ++|+++|+||+||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|.++++++++|+|
T Consensus 238 ~~a~---~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~~ 314 (473)
T cd07082 238 KQHP---MKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVGMP 314 (473)
T ss_pred HHhC---CCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHHHHHHHHHHHHHhcCCCCCC
Confidence 8875 6999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 380 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 380 ~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
.++++++||+++..+++++.+++++++.+|+++++||... .|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 315 ~~~~~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~~--~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~ 389 (473)
T cd07082 315 WDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGRE--GGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVN 389 (473)
T ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC--CCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeC
Confidence 9999999999999999999999999999999999999753 38999999999999999999999999999999985
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. |
| >cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-76 Score=613.69 Aligned_cols=365 Identities=37% Similarity=0.566 Sum_probs=343.0
Q ss_pred ecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhcc
Q 012802 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165 (456)
Q Consensus 86 ~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ 165 (456)
.||+||+++++++.++.+|++++++.|++||. .|++++.++|.++|+++++.|++++++|++++++|+|||+.++. .
T Consensus 1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~-~ 77 (454)
T cd07101 1 EAPFTGEPLGELPQSTPADVEAAFARARAAQR--AWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARRHAF-E 77 (454)
T ss_pred CcCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHH-H
Confidence 38999999999999999999999999999999 99999999999999999999999999999999999999999886 5
Q ss_pred chHHHHHHHHHHHHHhHhhcCccc-C--CCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCC
Q 012802 166 EVPMTTRLFRYYAGWADKIQGLTA-P--ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242 (456)
Q Consensus 166 ev~~~~~~l~~~a~~~~~~~~~~~-~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~ 242 (456)
|+..+++.++|++..+.+..+... + .......+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus 78 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~ 157 (454)
T cd07101 78 EVLDVAIVARYYARRAERLLKPRRRRGAIPVLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQT 157 (454)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccc
Confidence 999999999999988877654322 1 1123467899999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEe
Q 012802 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 322 (456)
Q Consensus 243 p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV 322 (456)
|+++..+.+++.++|+|+|++|+++|++.+.+..|.+| ++.|.||||+.+|+.|++.+++ +++|+++|+||+||+||
T Consensus 158 p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~--~~~V~fTGs~~~g~~i~~~aa~-~~~~~~lElgG~~p~iV 234 (454)
T cd07101 158 ALTALWAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTATGRVVAERAGR-RLIGCSLELGGKNPMIV 234 (454)
T ss_pred hHHHHHHHHHHHHcCcCCCcEEEEeCCcHHHHHHHHhC--CCEEEEECCHHHHHHHHHHHHh-cCCcEEEECCCCceEEE
Confidence 99999999999999999999999999888888999986 5889999999999999999987 88999999999999999
Q ss_pred ccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHH
Q 012802 323 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 402 (456)
Q Consensus 323 ~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i 402 (456)
++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.+++++.+++
T Consensus 235 ~~dAdl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~v 314 (454)
T cd07101 235 LEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHV 314 (454)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhCCCEEEeCCcccC-CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 403 RSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 403 ~~a~~~Ga~v~~gg~~~~-~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++++++|+++++||.... .+|+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 315 ~~a~~~Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~ 369 (454)
T cd07101 315 DDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVA 369 (454)
T ss_pred HHHHHCCCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeC
Confidence 999999999999997532 358999999999999999999999999999999996
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). |
| >cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-76 Score=613.48 Aligned_cols=370 Identities=48% Similarity=0.812 Sum_probs=349.4
Q ss_pred eecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhc
Q 012802 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (456)
Q Consensus 85 v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 164 (456)
++||+||++|++++.++.+|++++++.|++|+.++.|+.+|.++|.++|+++++.|.+++++|++++++|+|||+.+++.
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~ 80 (457)
T cd07114 1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLIRETRA 80 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 46999999999999999999999999999999744599999999999999999999999999999999999999999775
Q ss_pred cchHHHHHHHHHHHHHhHhhcCcccCCC-CCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCCh
Q 012802 165 TEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243 (456)
Q Consensus 165 ~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p 243 (456)
|+..+++.+++++.+.+++.+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 81 -ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~~~p 159 (457)
T cd07114 81 -QVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTP 159 (457)
T ss_pred -HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCccch
Confidence 999999999999988877765444332 355678899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEec
Q 012802 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 323 (456)
Q Consensus 244 ~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~ 323 (456)
+++..++++|.++|+|+|++|++++++.+.+..|..|++++.|+||||+++|+.|++.+++ +++|+++|+||+||+||+
T Consensus 160 ~~~~~l~~~l~~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~ 238 (457)
T cd07114 160 ASTLELAKLAEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAE-NLAPVTLELGGKSPNIVF 238 (457)
T ss_pred HHHHHHHHHHHHcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeEEEecCCCCeeEEC
Confidence 9999999999999999999999999777789999999999999999999999999999887 889999999999999999
Q ss_pred cCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHH
Q 012802 324 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 403 (456)
Q Consensus 324 ~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~ 403 (456)
+|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|+
T Consensus 239 ~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~ 318 (457)
T cd07114 239 DDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKVERYVA 318 (457)
T ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 404 SGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 404 ~a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++++|+++++||.... ..|+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 319 ~a~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 375 (457)
T cd07114 319 RAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFD 375 (457)
T ss_pred HHHHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccC
Confidence 99999999999997642 358999999999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. |
| >PLN02174 aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-76 Score=610.59 Aligned_cols=348 Identities=28% Similarity=0.395 Sum_probs=323.0
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHH
Q 012802 100 GEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179 (456)
Q Consensus 100 ~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~ 179 (456)
-...|++++++.|++||. .|+.++..+|.++|+++++.|++|.++|+++++.|+|||+.++...|+..+++.++|+++
T Consensus 7 ~~~~~v~~av~~a~~af~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~~~~ 84 (484)
T PLN02174 7 FGAADASILVTELRRSFD--DGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALK 84 (484)
T ss_pred cCHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 457899999999999999 899999999999999999999999999999999999999988876799999999999999
Q ss_pred HhHhhcC----cccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHH
Q 012802 180 WADKIQG----LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHE 255 (456)
Q Consensus 180 ~~~~~~~----~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~ 255 (456)
..++..+ .......+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++++++.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~l~~~ 164 (484)
T PLN02174 85 QLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQ 164 (484)
T ss_pred HHHHHhcccccccccccCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHH
Confidence 8876654 221222234578999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHH
Q 012802 256 AGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELA 335 (456)
Q Consensus 256 aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i 335 (456)
++|+|++|+|+|. .+.+..|.. +++|+|+||||+.+|+.|++.+++ +++|+++|||||||+||++|||++.|++.+
T Consensus 165 -~lp~gvv~vv~G~-~~~~~~l~~-~~vd~V~FTGS~~~G~~I~~~aa~-~l~~v~LELGGk~p~iV~~dADl~~Aa~~i 240 (484)
T PLN02174 165 -YLDSSAVRVVEGA-VTETTALLE-QKWDKIFYTGSSKIGRVIMAAAAK-HLTPVVLELGGKSPVVVDSDTDLKVTVRRI 240 (484)
T ss_pred -hCCCCEEEEEECC-hHHHHHHhc-ccCCEEEEECChHHHHHHHHHHHh-cCCcEEEecCCCCeEEEcCCCCHHHHHHHH
Confidence 6999999999984 445666776 899999999999999999999987 899999999999999999999999999999
Q ss_pred HHHHh-ccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEe
Q 012802 336 HYALF-FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLET 414 (456)
Q Consensus 336 ~~~~~-~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~ 414 (456)
++++| .|+||.|++++|||||++++|+|+++|.++++++++|+|.+ ++++||++++.+++++.++|+++ .+|+++++
T Consensus 241 ~~g~f~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~-~~~~Gpli~~~~~~~v~~~i~~a-~~ga~~~~ 318 (484)
T PLN02174 241 IAGKWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPME-SKDMSRIVNSTHFDRLSKLLDEK-EVSDKIVY 318 (484)
T ss_pred HHHHhhCCCCCCCCcCcEEEEeHHHHHHHHHHHHHHHHhhcCCCCcc-cCCcCCCCCHHHHHHHHHHHHHH-HcCCEEEE
Confidence 99999 69999999999999999999999999999999999999987 79999999999999999999998 78999999
Q ss_pred CCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 415 GGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 415 gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
||.. +.+|+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 319 GG~~-~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 359 (484)
T PLN02174 319 GGEK-DRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLN 359 (484)
T ss_pred CCCc-CCCCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCC
Confidence 9975 3468999999999999999999999999999999986
|
|
| >cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-76 Score=610.17 Aligned_cols=364 Identities=41% Similarity=0.680 Sum_probs=343.0
Q ss_pred eecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhc
Q 012802 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (456)
Q Consensus 85 v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 164 (456)
++||+||+++++++.++.+|++++++.|++||. .|++++..+|.++|+++++.|++++++|++++++|+|||..++..
T Consensus 1 ~~~P~tg~~~~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 78 (446)
T cd07106 1 VINPATGEVFASAPVASEAQLDQAVAAAKAAFP--GWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLAEAQF 78 (446)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence 479999999999999999999999999999999 999999999999999999999999999999999999999998875
Q ss_pred cchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChh
Q 012802 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244 (456)
Q Consensus 165 ~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~ 244 (456)
|+..+++.++++++... .+...+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus 79 -ev~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~ 155 (446)
T cd07106 79 -EVGGAVAWLRYTASLDL--PDEVIEDDDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPL 155 (446)
T ss_pred -HHHHHHHHHHHHHhhhh--cCccccCCCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCccchH
Confidence 99999999999998763 232222223556789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEecc
Q 012802 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324 (456)
Q Consensus 245 ~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~ 324 (456)
++..+++++.++ +|+|++|+++++ .+.+..|.+|+++|.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++
T Consensus 156 ~~~~l~~~~~~~-lP~g~~~~v~g~-~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~-~~~~~~lElGG~~p~iV~~ 232 (446)
T cd07106 156 CTLKLGELAQEV-LPPGVLNVVSGG-DELGPALTSHPDIRKISFTGSTATGKKVMASAAK-TLKRVTLELGGNDAAIVLP 232 (446)
T ss_pred HHHHHHHHHHHh-CCcCeEEEeeCC-hhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeeEEecCCCCeeEECC
Confidence 999999999995 999999999984 4688999999999999999999999999999887 8999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHH
Q 012802 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 404 (456)
Q Consensus 325 daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~ 404 (456)
|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++++
T Consensus 233 dADl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~i~~ 312 (446)
T cd07106 233 DVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVED 312 (446)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCCCCCcEEEEccccHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 405 GVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 405 a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++.+|+++++||......|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 313 a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~ 364 (446)
T cd07106 313 AKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYS 364 (446)
T ss_pred HHHCCCEEEeCCCcCCCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeC
Confidence 9999999999997654468999999999999999999999999999999986
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. |
| >cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-75 Score=607.66 Aligned_cols=373 Identities=26% Similarity=0.337 Sum_probs=338.1
Q ss_pred ceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCC--CCCCHHHH----HHHHHHHHHHHH
Q 012802 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPW--PRMTAYER----SKIILRFADLLE 141 (456)
Q Consensus 68 ~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W--~~~~~~~R----~~~L~~~a~~l~ 141 (456)
+||||+|+.+ +++++++||.||+++++++.++.+|+++|+++|++||+ .| ..++..+| .++|.++++.|+
T Consensus 1 ~~i~g~~~~~--~~~~~~~nP~t~~~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~~~R~l~~~~il~~~a~~l~ 76 (489)
T cd07126 1 NLVAGKWKGA--SNYTTLLDPLNGDKFISVPDTDEDEINEFVDSLRQCPK--SGLHNPLKNPERYLLYGDVSHRVAHELR 76 (489)
T ss_pred CcCCCEEecC--CCcEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hccccCCCHHHHhhhHHHHHHHHHHHHH
Confidence 4799999874 47899999999999999999999999999999999999 67 66789999 899999999999
Q ss_pred hc--HHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCccc--CC-CCCceEEEEEccceEEEEEcCcChh
Q 012802 142 RH--NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA--PA-DGPYHVQTLHEPIGVAGQIIPWNFP 216 (456)
Q Consensus 142 ~~--~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~--~~-~~~~~~~~~~~P~GVv~~i~p~n~P 216 (456)
++ .++|++++++|+|||+.+++ .|+..+++.++||++..++..+... +. ..+...+++++|+|||++|+|||||
T Consensus 77 ~~~~~~~la~~~~~e~GK~~~~a~-~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~v~r~P~GVV~~I~PwNfP 155 (489)
T cd07126 77 KPEVEDFFARLIQRVAPKSDAQAL-GEVVVTRKFLENFAGDQVRFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFP 155 (489)
T ss_pred cCCCHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCceeccCCCCCCceeEEEEecceEEEEECCCchH
Confidence 99 49999999999999999886 4999999999999998877655442 21 1245678999999999999999999
Q ss_pred HHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHH
Q 012802 217 LLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGK 296 (456)
Q Consensus 217 ~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~ 296 (456)
+.+.++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+ +..+..|+++++|+||||+++|+
T Consensus 156 ~~l~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~aGlP~gv~~vv~G~~~~-~~~l~~~~~v~~V~FTGS~~vGr 234 (489)
T cd07126 156 LEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPT-MNKILLEANPRMTLFTGSSKVAE 234 (489)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCcCcCcEEEEeCCchh-HHHHhcCCCCCEEEEECCHHHHH
Confidence 99999999999999999999999999999999999999999999999999996655 45578899999999999999999
Q ss_pred HHHHHHhhCCCCcEEEecCCCCceEeccCC-CHHHHHHHHHHHHhccCCCcccCCceeEeccch-HHHHHHHHHHHhhhc
Q 012802 297 IVLQLAAKSNLKPVTLELGGKSPFIVCEDA-DVDKAAELAHYALFFNQGQCCCAGSRTFVHESV-YDQFVEKANALAMKR 374 (456)
Q Consensus 297 ~i~~~aa~~~~~pv~lelgG~~~~iV~~da-D~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i-~d~f~~~l~~~~~~~ 374 (456)
.|...++ +++.+|+||++|+||++|+ |+|.|++.+++++|.|+||.|++++|+|||+++ +|+|+++|.+.++++
T Consensus 235 ~i~~~~g----~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~ 310 (489)
T cd07126 235 RLALELH----GKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKALAEQR 310 (489)
T ss_pred HHHHHhC----CCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchHHHHHHHHHHHHHhc
Confidence 9988765 4699999999999999999 999999999999999999999999999999995 689999999999999
Q ss_pred ccCCCCCCCCccccCCCHHHHHHHHHHHHHHhh-CCCEEEeCCcccCC----CC-ceEecEEEee------CCCCCcccc
Q 012802 375 VVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD-GGAKLETGGERLGA----KG-YYIKPTVFTG------VKDDMLIAK 442 (456)
Q Consensus 375 ~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~-~Ga~v~~gg~~~~~----~g-~~~~PTvl~~------v~~~~~i~~ 442 (456)
++|+ +++||+++.. .+++.++|+++++ +|+++++||..... +| +|++||||.. ++++|++++
T Consensus 311 ~~g~-----~~~Gpli~~~-~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~ 384 (489)
T cd07126 311 KLED-----LTIGPVLTWT-TERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVT 384 (489)
T ss_pred ccCC-----CcCCCCcCHH-HHHHHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHh
Confidence 9875 4899999998 8999999999997 99999999976432 33 3899999952 578999999
Q ss_pred cccccceeEEEEeC
Q 012802 443 DEIFGPVQSILKYK 456 (456)
Q Consensus 443 ~EifGPvl~v~~~~ 456 (456)
||+||||++|++|+
T Consensus 385 eEiFGPVl~V~~~~ 398 (489)
T cd07126 385 TEVFGPFQVVTEYK 398 (489)
T ss_pred CCCcCCEEEEEEEC
Confidence 99999999999995
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. |
| >cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-75 Score=609.50 Aligned_cols=367 Identities=46% Similarity=0.788 Sum_probs=346.3
Q ss_pred eecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCCh-hhhh
Q 012802 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPF-EQSA 163 (456)
Q Consensus 85 v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~-~~a~ 163 (456)
++||.||+++++++.++.+|++++++.|++||+ .|+.++.++|.++|+++++.|++++++|++++++|+|||+ .+++
T Consensus 1 ~~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~a~ 78 (457)
T cd07108 1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAFP--EWAATPARERGKLLARIADALEARSEELARLLALETGNALRTQAR 78 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcHHHHH
Confidence 479999999999999999999999999999999 9999999999999999999999999999999999999997 5766
Q ss_pred ccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCCh
Q 012802 164 QTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243 (456)
Q Consensus 164 ~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p 243 (456)
.|+..+++.++|++++...+.+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 79 -~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p 157 (457)
T cd07108 79 -PEAAVLADLFRYFGGLAGELKGETLPFGPDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAP 157 (457)
T ss_pred -HHHHHHHHHHHHHHHHHHHhCCceeccCCCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCc
Confidence 5999999999999998877666554433455667889999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEec
Q 012802 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 323 (456)
Q Consensus 244 ~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~ 323 (456)
.++..+++++.++ +|+|++|+++|++.+.+..|..|+++|.|+||||+.+|+.|++.+++ +++|+++|+|||||+||+
T Consensus 158 ~~~~~l~~~~~~~-lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~-~l~~~~lelgG~~~~iV~ 235 (457)
T cd07108 158 LAVLLLAEILAQV-LPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAAD-RLIPVSLELGGKSPMIVF 235 (457)
T ss_pred HHHHHHHHHHHHh-CCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhc-cCCeEEEECCCCCeeEEC
Confidence 9999999999996 99999999998777788999999999999999999999999999987 899999999999999999
Q ss_pred cCCCHHHHHHHHHHH-HhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHH
Q 012802 324 EDADVDKAAELAHYA-LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 402 (456)
Q Consensus 324 ~daD~d~aa~~i~~~-~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i 402 (456)
+|||++.|++.++++ +|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|
T Consensus 236 ~dAdl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i 315 (457)
T cd07108 236 PDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGYI 315 (457)
T ss_pred CCCCHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHH
Confidence 999999999999999 4999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhh-CCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 403 RSGVD-GGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 403 ~~a~~-~Ga~v~~gg~~~~----~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++++ +|+++++||.... .+|+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 316 ~~a~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~ 374 (457)
T cd07108 316 DLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWK 374 (457)
T ss_pred HHHHhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCC
Confidence 99998 9999999997642 469999999999999999999999999999999986
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. |
| >cd07099 ALDH_DDALDH Methylomonas sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-75 Score=607.51 Aligned_cols=365 Identities=38% Similarity=0.585 Sum_probs=343.9
Q ss_pred ecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhcc
Q 012802 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165 (456)
Q Consensus 86 ~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ 165 (456)
+||+||+++++++.++.+|++++++.|++||. .|++++.++|.++|+++++.|++++++|++++++|+|||+.++. .
T Consensus 1 ~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~-~ 77 (453)
T cd07099 1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQR--AWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRADAG-L 77 (453)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-H
Confidence 48999999999999999999999999999999 99999999999999999999999999999999999999998765 4
Q ss_pred chHHHHHHHHHHHHHhHhhcCcc-cCC---CCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCC
Q 012802 166 EVPMTTRLFRYYAGWADKIQGLT-APA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241 (456)
Q Consensus 166 ev~~~~~~l~~~a~~~~~~~~~~-~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~ 241 (456)
|+..+++.++|+++.+.+..+.. .+. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 78 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~ 157 (453)
T cd07099 78 EVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEV 157 (453)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCcc
Confidence 99999999999999887765432 221 13556789999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceE
Q 012802 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321 (456)
Q Consensus 242 ~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~i 321 (456)
+|+++..++++|.++|+|+|++|++++++ +.+..|+.| .+|.|+||||+++|+.|++.+++ +++|+++|+|||||+|
T Consensus 158 ~p~~~~~l~~~l~~ag~P~g~~~vv~g~~-~~~~~l~~~-~vd~V~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~~p~i 234 (453)
T cd07099 158 TPLVGELLAEAWAAAGPPQGVLQVVTGDG-ATGAALIDA-GVDKVAFTGSVATGRKVMAAAAE-RLIPVVLELGGKDPMI 234 (453)
T ss_pred chHHHHHHHHHHHHcCCCCCeEEEEeCCc-hHHHHHhcC-CCCEEEEECCHHHHHHHHHHHHh-cCCeEEEECCCCCeEE
Confidence 99999999999999999999999999965 678888887 59999999999999999999987 7999999999999999
Q ss_pred eccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHH
Q 012802 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 401 (456)
Q Consensus 322 V~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~ 401 (456)
|++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.|+++++||++++.+++++.++
T Consensus 235 V~~dadl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~ 314 (453)
T cd07099 235 VLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRH 314 (453)
T ss_pred ECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCCcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 402 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 402 i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++++++|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 315 i~~a~~~ga~~~~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~ 369 (453)
T cd07099 315 VDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVA 369 (453)
T ss_pred HHHHHhCCCEEEeCCCcCCCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeC
Confidence 9999999999999997643468999999999999999999999999999999986
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. |
| >cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-75 Score=607.80 Aligned_cols=364 Identities=38% Similarity=0.617 Sum_probs=346.6
Q ss_pred eeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhh
Q 012802 84 PTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163 (456)
Q Consensus 84 ~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~ 163 (456)
+++||+||+++++++.++.+|++++++.|++|+. .|++++..+|.++|+++++.|+++.++|++++++|+|||+.+++
T Consensus 2 ~~~~P~t~~~~~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~ 79 (453)
T cd07094 2 DVHNPYDGEVIGKVPADDRADAEEALATARAGAE--NRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIKDAR 79 (453)
T ss_pred CccCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH
Confidence 5789999999999999999999999999999999 99999999999999999999999999999999999999999987
Q ss_pred ccchHHHHHHHHHHHHHhHhhcCcccCCC-----CCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeec
Q 012802 164 QTEVPMTTRLFRYYAGWADKIQGLTAPAD-----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 238 (456)
Q Consensus 164 ~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkp 238 (456)
. |+..+++.++|++...++..+...+.+ .+...+..++|+|||++|+|||||+...++++++||++||+||+||
T Consensus 80 ~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~Kp 158 (453)
T cd07094 80 V-EVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKP 158 (453)
T ss_pred H-HHHHHHHHHHHHHHHHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEEC
Confidence 5 999999999999998888766544332 2456778899999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCC
Q 012802 239 AEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS 318 (456)
Q Consensus 239 s~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~ 318 (456)
|+.+|+++..+++++.++|+|+|++++++|++.+++..|..|+++|.|+||||+++|+.|++.+ +++|+++|+||||
T Consensus 159 s~~~p~~~~~l~~~l~~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a---~~~~~~lelGGk~ 235 (453)
T cd07094 159 ASKTPLSALELAKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANA---GGKRIALELGGNA 235 (453)
T ss_pred CCcchHHHHHHHHHHHHcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHc---CCCceEEecCCCC
Confidence 9999999999999999999999999999997778899999999999999999999999999987 5799999999999
Q ss_pred ceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHH
Q 012802 319 PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 398 (456)
Q Consensus 319 ~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~ 398 (456)
|+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..+++++
T Consensus 236 ~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~ 315 (453)
T cd07094 236 PVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERV 315 (453)
T ss_pred ceEECCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 399 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 399 ~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
.++|++++++|+++++||.. .|+|++|||+.+++++|+++++|+||||++|++|+
T Consensus 316 ~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~ 370 (453)
T cd07094 316 ERWVEEAVEAGARLLCGGER---DGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYD 370 (453)
T ss_pred HHHHHHHHHCCCEEEeCccC---CCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeC
Confidence 99999999999999999864 48999999999999999999999999999999996
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. |
| >cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-75 Score=605.75 Aligned_cols=366 Identities=36% Similarity=0.556 Sum_probs=346.7
Q ss_pred ecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhcc
Q 012802 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165 (456)
Q Consensus 86 ~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ 165 (456)
+||+||+++++++.++.+|++++++.|++||+ .|+.++..+|.++|+++++.|+++.++|++++++|+|||..++. .
T Consensus 1 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~-~ 77 (452)
T cd07102 1 ISPIDGSVIAERPLASLEAVRAALERARAAQK--GWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQAG-G 77 (452)
T ss_pred CCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHH-H
Confidence 58999999999999999999999999999999 99999999999999999999999999999999999999999876 5
Q ss_pred chHHHHHHHHHHHHHhHhhcCcc-cCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChh
Q 012802 166 EVPMTTRLFRYYAGWADKIQGLT-APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244 (456)
Q Consensus 166 ev~~~~~~l~~~a~~~~~~~~~~-~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~ 244 (456)
|+..+++.++|++..+++..+.. .+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus 78 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~ 157 (452)
T cd07102 78 EIRGMLERARYMISIAEEALADIRVPEKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPL 157 (452)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcccCCCCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcH
Confidence 99999999999999887665432 23334566788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEecc
Q 012802 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324 (456)
Q Consensus 245 ~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~ 324 (456)
++..|.++|.++|+|+|++|++++++ +.+..|+.|++|+.|.||||+++|+.|++.+++ +++|+++|+|||||+||++
T Consensus 158 ~~~~l~~~l~~aGlP~g~~~~v~g~~-~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~-~~~~v~lelgG~~~~iV~~ 235 (452)
T cd07102 158 CGERFAAAFAEAGLPEGVFQVLHLSH-ETSAALIADPRIDHVSFTGSVAGGRAIQRAAAG-RFIKVGLELGGKDPAYVRP 235 (452)
T ss_pred HHHHHHHHHHhcCCCcCcEEEEeCCc-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCCcEEEECCCCCceEEcC
Confidence 99999999999999999999999966 788999999999999999999999999999887 8899999999999999999
Q ss_pred CCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHH
Q 012802 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 404 (456)
Q Consensus 325 daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~ 404 (456)
|||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|++++.++++|+|.++++++||+++..+++++.+++++
T Consensus 236 dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~l~vg~p~~~~~~~gpli~~~~~~~i~~~i~~ 315 (452)
T cd07102 236 DADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIAD 315 (452)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhCCCEEEeCCccc---CCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 405 GVDGGAKLETGGERL---GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 405 a~~~Ga~v~~gg~~~---~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++.+|+++++||... +.+|+|++|||+.+++++|+++++|+||||++|++|+
T Consensus 316 a~~~ga~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~ 370 (452)
T cd07102 316 AIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVK 370 (452)
T ss_pred HHhCCCEEEeCCCCCCCCCCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeC
Confidence 999999999999753 2468999999999999999999999999999999985
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. |
| >cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-75 Score=605.85 Aligned_cols=367 Identities=44% Similarity=0.710 Sum_probs=346.1
Q ss_pred eecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhc
Q 012802 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (456)
Q Consensus 85 v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 164 (456)
++||.||+++++++.++.+|++++++.|++|++ .|+.++.++|.++|+++++.|+++.++|++++++|+|||..++..
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~~~~~ 78 (450)
T cd07092 1 VVDPATGEEIATVPDASAADVDAAVAAAHAAFP--SWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLHLVRD 78 (450)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHH
Confidence 479999999999999999999999999999999 999999999999999999999999999999999999999977666
Q ss_pred cchHHHHHHHHHHHHHhHhhcCcccCC-CCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCCh
Q 012802 165 TEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243 (456)
Q Consensus 165 ~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p 243 (456)
.|+..+++.+++++...+.+.+...+. ..+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 79 ~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~ 158 (450)
T cd07092 79 DELPGAVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTP 158 (450)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcccCccCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccch
Confidence 699999999999998877765543221 1234567899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEec
Q 012802 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 323 (456)
Q Consensus 244 ~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~ 323 (456)
+++..+.++|.+ |+|+|++|++++++.+.+..|+.|++++.|+||||+.+|+.|++.+++ +++|+++|+|||||+||+
T Consensus 159 ~~~~~l~~~~~~-glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~-~~~~~~lelgG~~p~iV~ 236 (450)
T cd07092 159 LTTLLLAELAAE-VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAAD-TLKRVHLELGGKAPVIVF 236 (450)
T ss_pred HHHHHHHHHHHh-cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCCcEEEECCCCCeeEEC
Confidence 999999999999 999999999998777788999999999999999999999999999987 889999999999999999
Q ss_pred cCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHH
Q 012802 324 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 403 (456)
Q Consensus 324 ~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~ 403 (456)
+|||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|+
T Consensus 237 ~dAdl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~i~~~i~ 316 (450)
T cd07092 237 DDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVE 316 (450)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhhCCcCCCCCCCCccCcccCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 404 SGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 404 ~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++ +|+++++||......|+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 317 ~a~-~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 368 (450)
T cd07092 317 RAP-AHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFD 368 (450)
T ss_pred HHH-cCCEEEeCCCCCCCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEEC
Confidence 998 9999999997654579999999999999999999999999999999986
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. |
| >cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-75 Score=604.55 Aligned_cols=368 Identities=44% Similarity=0.744 Sum_probs=349.6
Q ss_pred eecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhc
Q 012802 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (456)
Q Consensus 85 v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 164 (456)
++||.||+++++++.++.+|++++++.|++|++ .|+.++.++|.++|+++++.|+++.++|++++++|+|||..+++.
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 78 (451)
T cd07103 1 VINPATGEVIGEVPDAGAADADAAIDAAAAAFK--TWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLAEARG 78 (451)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 479999999999999999999999999999999 999999999999999999999999999999999999999999874
Q ss_pred cchHHHHHHHHHHHHHhHhhcCcccCCC-CCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCCh
Q 012802 165 TEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243 (456)
Q Consensus 165 ~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p 243 (456)
|+..+++.++|++...++..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 79 -ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~ 157 (451)
T cd07103 79 -EVDYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETP 157 (451)
T ss_pred -HHHHHHHHHHHHHHHHHHhcCcccccCCCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCc
Confidence 999999999999988877666544322 355678999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEec
Q 012802 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC 323 (456)
Q Consensus 244 ~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~ 323 (456)
.++..++++|.++|+|+|++|++++++.+.+..|..|+++|.|+||||+.+|+.|.+.+++ +++|+++|+|||||+||+
T Consensus 158 ~~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~ 236 (451)
T cd07103 158 LSALALAELAEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAAD-TVKRVSLELGGNAPFIVF 236 (451)
T ss_pred HHHHHHHHHHHHcCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCcEEEECCCCCeEEEC
Confidence 9999999999999999999999999777788999999999999999999999999999988 889999999999999999
Q ss_pred cCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHH
Q 012802 324 EDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 403 (456)
Q Consensus 324 ~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~ 403 (456)
+|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|.++++++++|+|.++++++||++++.+++++.++++
T Consensus 237 ~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~i~ 316 (451)
T cd07103 237 DDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVE 316 (451)
T ss_pred CCCCHHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcCcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 404 SGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 404 ~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++.+|+++++||.....+|+|++|||+.+++++|.++++|+||||++|++|+
T Consensus 317 ~a~~~ga~~l~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~ 369 (451)
T cd07103 317 DAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFD 369 (451)
T ss_pred HHHHCCCEEEeCCCcCCCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEEC
Confidence 99999999999997654478999999999999999999999999999999986
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. |
| >cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-75 Score=604.59 Aligned_cols=364 Identities=36% Similarity=0.564 Sum_probs=342.6
Q ss_pred eeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhh
Q 012802 83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162 (456)
Q Consensus 83 ~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 162 (456)
++++||+||+++++++.++.+|++++++.|++||. .|++++..+|.++|+++++.|++++++|++++++|+|||+.++
T Consensus 1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 78 (452)
T cd07147 1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFR--PMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKDA 78 (452)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH
Confidence 46789999999999999999999999999999999 9999999999999999999999999999999999999999998
Q ss_pred hccchHHHHHHHHHHHHHhHhhcCcccCC-----CCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEee
Q 012802 163 AQTEVPMTTRLFRYYAGWADKIQGLTAPA-----DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLK 237 (456)
Q Consensus 163 ~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-----~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlk 237 (456)
+. |+..+++.++|++..+.+..+...+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|
T Consensus 79 ~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlK 157 (452)
T cd07147 79 RG-EVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLK 157 (452)
T ss_pred HH-HHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEE
Confidence 75 99999999999998877665443221 1244567889999999999999999999999999999999999999
Q ss_pred cCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCC
Q 012802 238 TAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 317 (456)
Q Consensus 238 ps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~ 317 (456)
||+.+|+++.+++++|.++|+|+|++|+++++ .+.+..|..|+++|.|+||||+.+|+.|++.++. +|+++|+|||
T Consensus 158 ps~~~p~~~~~l~~~l~~ag~P~g~v~~v~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a~~---~~v~lelgG~ 233 (452)
T cd07147 158 PASRTPLSALILGEVLAETGLPKGAFSVLPCS-RDDADLLVTDERIKLLSFTGSPAVGWDLKARAGK---KKVVLELGGN 233 (452)
T ss_pred CCCCCcHHHHHHHHHHHHcCCCcCcEEEEeCC-ccchhHHhcCCCCCEEEEECCHHHHHHHHHHhCc---CceEeecCCC
Confidence 99999999999999999999999999999985 4578899999999999999999999999998764 7999999999
Q ss_pred CceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHH
Q 012802 318 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 397 (456)
Q Consensus 318 ~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~ 397 (456)
||+||++|||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|++++.++++|+|.++++++||+++..++++
T Consensus 234 ~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~ 313 (452)
T cd07147 234 AAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAER 313 (452)
T ss_pred CcEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 398 ILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 398 ~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 314 ~~~~i~~a~~~Ga~~l~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 369 (452)
T cd07147 314 VEGWVNEAVDAGAKLLTGGKR---DGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYD 369 (452)
T ss_pred HHHHHHHHHHCCCEEEecCCc---CCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeC
Confidence 999999999999999999964 48999999999999999999999999999999986
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. |
| >cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-74 Score=604.54 Aligned_cols=367 Identities=32% Similarity=0.550 Sum_probs=341.5
Q ss_pred ecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhcc
Q 012802 86 LDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165 (456)
Q Consensus 86 ~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ 165 (456)
+||.||+++++++.++.+|++++++.|++|++ .|+++|.++|.++|+++++.|++++++|++++++|+|||+.+++..
T Consensus 1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ 78 (465)
T cd07098 1 YDPATGQHLGSVPADTPEDVDEAIAAARAAQR--EWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLG 78 (465)
T ss_pred CCCCCCCeeEEeeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Confidence 58999999999999999999999999999999 9999999999999999999999999999999999999999998767
Q ss_pred chHHHHHHHHHHHHHhHhhcCc-ccCCC---CCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCC
Q 012802 166 EVPMTTRLFRYYAGWADKIQGL-TAPAD---GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241 (456)
Q Consensus 166 ev~~~~~~l~~~a~~~~~~~~~-~~~~~---~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~ 241 (456)
|+..+++.++|++...++.... ..+.. .+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.
T Consensus 79 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~ 158 (465)
T cd07098 79 EILVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQ 158 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECCCc
Confidence 9999999999999877664322 22211 2345678899999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHH----HHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCC
Q 012802 242 TPLSALYVSKLL----HEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 317 (456)
Q Consensus 242 ~p~~~~~l~~~l----~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~ 317 (456)
+|+++..+++++ .++|+|+|++|+|++++ +.+..|+.|++|+.|.||||+.+|+.|.+.+++ +++|+++|+|||
T Consensus 159 ~p~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~-~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~-~~~~~~lelgG~ 236 (465)
T cd07098 159 VAWSSGFFLSIIRECLAACGHDPDLVQLVTCLP-ETAEALTSHPVIDHITFIGSPPVGKKVMAAAAE-SLTPVVLELGGK 236 (465)
T ss_pred CcHHHHHHHHHHHHHHHhcCCCCCeEEEEECCH-HHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeEEEECCCC
Confidence 999999766654 68999999999999965 788999999999999999999999999999987 789999999999
Q ss_pred CceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHH
Q 012802 318 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 397 (456)
Q Consensus 318 ~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~ 397 (456)
||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++.++++|+|+++++++||++++.++++
T Consensus 237 ~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~ 316 (465)
T cd07098 237 DPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDR 316 (465)
T ss_pred CeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 398 ILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 398 ~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+.++|++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 317 ~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 379 (465)
T cd07098 317 LEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKAS 379 (465)
T ss_pred HHHHHHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeC
Confidence 99999999999999999986532 368999999999999999999999999999999996
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. |
| >cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-75 Score=601.94 Aligned_cols=358 Identities=40% Similarity=0.633 Sum_probs=339.0
Q ss_pred CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhccchHHH
Q 012802 91 GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMT 170 (456)
Q Consensus 91 ge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~ 170 (456)
|+++++++.++.++++++++.|++||+ .|++++.++|.++|+++++.|++++++|++++++|+|||+.++.. |+..+
T Consensus 1 ~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~ 77 (443)
T cd07152 1 GAVLGEVGVADAADVDRAAARAAAAQR--AWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKAGF-EVGAA 77 (443)
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH-HHHHH
Confidence 689999999999999999999999999 999999999999999999999999999999999999999988775 99999
Q ss_pred HHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHH-HHH
Q 012802 171 TRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA-LYV 249 (456)
Q Consensus 171 ~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~-~~l 249 (456)
++.+++++.+.++..+...+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++ ..+
T Consensus 78 i~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~~l 157 (443)
T cd07152 78 IGELHEAAGLPTQPQGEILPSAPGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVI 157 (443)
T ss_pred HHHHHHHHHhHHHhCCccccccCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHHHH
Confidence 9999999987766555444433455678899999999999999999999999999999999999999999999996 799
Q ss_pred HHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEeccCCCHH
Q 012802 250 SKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVD 329 (456)
Q Consensus 250 ~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d 329 (456)
.++|.++|+|+|++|++++ +.+.+..|..|+++|.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++
T Consensus 158 ~~~~~~ag~P~gvv~~v~g-~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~-~~~~~~lElGGk~~~iV~~dAdl~ 235 (443)
T cd07152 158 ARLFEEAGLPAGVLHVLPG-GADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGR-HLKKVSLELGGKNALIVLDDADLD 235 (443)
T ss_pred HHHHHHhCcCcCcEEEecC-ChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCcEEEECCCCCeEEECCCCCHH
Confidence 9999999999999999998 55688999999999999999999999999999887 899999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhCC
Q 012802 330 KAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGG 409 (456)
Q Consensus 330 ~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~G 409 (456)
.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.++++++||++++.+++++.++|++++.+|
T Consensus 236 ~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~G 315 (443)
T cd07152 236 LAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAAG 315 (443)
T ss_pred HHHHHHHHHHHhhcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 410 AKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 410 a~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 316 a~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~ 359 (443)
T cd07152 316 ARLEAGGTY---DGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFD 359 (443)
T ss_pred CEEEeccCc---CCEEEcCEEEecCCCCChhhhccccCCeEEEEeeC
Confidence 999999964 48999999999999999999999999999999986
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. |
| >cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-74 Score=601.91 Aligned_cols=369 Identities=46% Similarity=0.829 Sum_probs=349.6
Q ss_pred eecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhc
Q 012802 85 TLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164 (456)
Q Consensus 85 v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 164 (456)
.+||+||+++++++.++.+|++++++.|++|+. .|+.++.++|.++|+++++.|++++++|++++++|+|||..+++.
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~ 78 (455)
T cd07093 1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFP--GWSRMSPAERARILHKVADLIEARADELALLESLDTGKPITLART 78 (455)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 369999999999999999999999999999999 999999999999999999999999999999999999999988776
Q ss_pred cchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChh
Q 012802 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244 (456)
Q Consensus 165 ~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~ 244 (456)
.|+..+++.++|+++...+..+...+...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus 79 ~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~p~ 158 (455)
T cd07093 79 RDIPRAAANFRFFADYILQLDGESYPQDGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPL 158 (455)
T ss_pred HHHHHHHHHHHHHHHhHHHhCCccccCCCCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcCcH
Confidence 79999999999999887765544444334667788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEecc
Q 012802 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324 (456)
Q Consensus 245 ~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~ 324 (456)
++..+.++|.++|+|+|+||++++++.+.+..|+.|++++.|+||||+.+|+.|++.+++ +++|+++|+||+||+||++
T Consensus 159 ~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~~ 237 (455)
T cd07093 159 TAWLLAELANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAP-NLKPVSLELGGKNPNIVFA 237 (455)
T ss_pred HHHHHHHHHHhcCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhh-cccceEeecCCCCceEECC
Confidence 999999999999999999999998777889999999999999999999999999999987 8899999999999999999
Q ss_pred CCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHH
Q 012802 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 404 (456)
Q Consensus 325 daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~ 404 (456)
|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++
T Consensus 238 dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~ 317 (455)
T cd07093 238 DADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVEL 317 (455)
T ss_pred CCCHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhCCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 405 GVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 405 a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++.+|+++++||.... +.|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 318 a~~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 373 (455)
T cd07093 318 ARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFD 373 (455)
T ss_pred HHHCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeC
Confidence 9999999999997642 358999999999999999999999999999999986
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. |
| >cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-74 Score=598.63 Aligned_cols=361 Identities=38% Similarity=0.575 Sum_probs=339.4
Q ss_pred eeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhh
Q 012802 84 PTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163 (456)
Q Consensus 84 ~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~ 163 (456)
+++||+||+++++++.++.++++++++.|+++ |+.++.++|.++|+++++.|++++++|++++++|+|||+.++.
T Consensus 2 ~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~~-----~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~ 76 (451)
T cd07146 2 EVRNPYTGEVVGTVPAGTEEALREALALAASY-----RSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLKDTR 76 (451)
T ss_pred CccCCCCCCEEEEEcCCCHHHHHHHHHHHHHH-----HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence 57899999999999999999999999998763 7789999999999999999999999999999999999999987
Q ss_pred ccchHHHHHHHHHHHHHhHhhcCcccCCC-----CCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeec
Q 012802 164 QTEVPMTTRLFRYYAGWADKIQGLTAPAD-----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 238 (456)
Q Consensus 164 ~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkp 238 (456)
. |+..+++.++|++....+..+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+||
T Consensus 77 ~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKp 155 (451)
T cd07146 77 Y-EVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKP 155 (451)
T ss_pred H-HHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEEC
Confidence 4 999999999999988776655433221 2445678999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCC
Q 012802 239 AEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS 318 (456)
Q Consensus 239 s~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~ 318 (456)
|+.+|+++..+.++|.++|+|+|++|++++++.+++..|++|+++|.|+||||+.+|+.|.+.++ ++|+++|+||||
T Consensus 156 s~~~p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~a~---~~~~~lElGG~~ 232 (451)
T cd07146 156 SEKTPLSAIYLADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAG---YKRQLLELGGND 232 (451)
T ss_pred CCCchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhc---CCceeeecCCCc
Confidence 99999999999999999999999999999977788999999999999999999999999998764 589999999999
Q ss_pred ceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHH
Q 012802 319 PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 398 (456)
Q Consensus 319 ~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~ 398 (456)
|+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.|+++++||++++.+++++
T Consensus 233 p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v 312 (451)
T cd07146 233 PLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQI 312 (451)
T ss_pred eEEECCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 399 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 399 ~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
.+++++++++|+++++||.. .|+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 313 ~~~v~~a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~ 367 (451)
T cd07146 313 ENRVEEAIAQGARVLLGNQR---QGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVK 367 (451)
T ss_pred HHHHHHHHhCCCEEEeCCCc---CCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeC
Confidence 99999999999999999964 48999999999999999999999999999999996
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. |
| >PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-74 Score=639.01 Aligned_cols=380 Identities=35% Similarity=0.512 Sum_probs=355.0
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCC-EEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 012802 65 YTQLLINGQFVDSASGKTFPTLDPRTGD-VITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (456)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge-~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (456)
..+.+||| ++++++++||+|++ +|++++.++.+++++|++.|++||+ .|+.++.++|.++|+++++.|+++
T Consensus 552 ~~~~~i~g------~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Ai~aA~~A~~--~W~~~~~~~Ra~iL~kaAdll~~~ 623 (1038)
T PRK11904 552 QAGPIING------EGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFP--AWSRTPVEERAAILERAADLLEAN 623 (1038)
T ss_pred eecceEcC------CCCeEEEECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHh
Confidence 45677888 45679999999988 9999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcc--cCCCCCceEEEEEccceEEEEEcCcChhHHHHH
Q 012802 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT--APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221 (456)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~--~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 221 (456)
+++|+.++++|+|||+.++. .|+..++++++||+..+.+..+.. .+...+..++..++|+|||++|+|||||+..++
T Consensus 624 ~~eL~~l~~~E~GK~~~~a~-~EV~eaid~lr~ya~~a~~~~~~~~~l~g~~ge~n~~~~~P~GVv~~IsPwNfPlai~~ 702 (1038)
T PRK11904 624 RAELIALCVREAGKTLQDAI-AEVREAVDFCRYYAAQARRLFGAPEKLPGPTGESNELRLHGRGVFVCISPWNFPLAIFL 702 (1038)
T ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCCcccCCCCCceeEEEEecceEEEEECCCccHHHHHH
Confidence 99999999999999999986 499999999999999988876542 333446778899999999999999999999999
Q ss_pred HHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHH
Q 012802 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (456)
Q Consensus 222 ~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~ 301 (456)
+++++||++||+||+|||+++|+++..++++|.++|+|+|++|+++|++.+++..|+.|++|++|.||||+++|+.|.+.
T Consensus 703 ~~i~aALaaGNtVIlKPse~tpl~a~~l~~ll~eAGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~ 782 (1038)
T PRK11904 703 GQVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRT 782 (1038)
T ss_pred HHHHHHHHcCCEEEeeCCCcCHHHHHHHHHHHHHhCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999998
Q ss_pred HhhC--CCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCC
Q 012802 302 AAKS--NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379 (456)
Q Consensus 302 aa~~--~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p 379 (456)
++.+ .++|+++|+|||||+||++|||+|+|++.+++|+|.++||.|+++++||||+++||+|+++|+++++++++|+|
T Consensus 783 ~A~~~g~~~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~fl~~L~~~~~~l~vGdp 862 (1038)
T PRK11904 783 LAARDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSALRVLFVQEDIADRVIEMLKGAMAELKVGDP 862 (1038)
T ss_pred HhhccCCCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEeHHHHHHHHHHHHHHHHhccCCCc
Confidence 8863 37899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccC--CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 380 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 380 ~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
.++++++||+|++.+++++.++|+++++ |+++++||...+ ++|+|+.|||+.. +++.+++||+||||++|++|+
T Consensus 863 ~d~~t~~GPvI~~~a~~~l~~~I~~a~~-ga~vl~gg~~~~~~~~G~fv~PTvi~~--~~~~~~~eEiFGPVL~V~~~~ 938 (1038)
T PRK11904 863 RLLSTDVGPVIDAEAKANLDAHIERMKR-EARLLAQLPLPAGTENGHFVAPTAFEI--DSISQLEREVFGPILHVIRYK 938 (1038)
T ss_pred ccccCCccCCCCHHHHHHHHHHHHHHHc-CCEEEeCCCCCCCCCCceEEeeEEEcc--CCcHHhCCCCcCcEEEEEEeC
Confidence 9999999999999999999999999876 899999997643 3599999999963 678899999999999999995
|
|
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-74 Score=646.81 Aligned_cols=373 Identities=30% Similarity=0.471 Sum_probs=347.6
Q ss_pred CccCceecCEeeeCCCCCeeeeecCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHh
Q 012802 64 DYTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (456)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~ 142 (456)
++...+|+|+. ..+.+++++||.| +++|++++.++.+|+++|++.|++||. .|+.+|..+|+++|+++++.|++
T Consensus 645 ~~~~p~~~~~~---~~~~~~~v~nPa~~~~~vg~v~~a~~~dv~~Av~aA~~A~~--~W~~~p~~eRa~iL~r~Adlle~ 719 (1318)
T PRK11809 645 WQAAPMLEDPV---AAGEMSPVINPADPRDIVGYVREATPAEVEQALESAVNAAP--IWFATPPAERAAILERAADLMEA 719 (1318)
T ss_pred cccCCcccCcC---CCCCEEEeECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHH
Confidence 34466778842 3567899999998 899999999999999999999999998 99999999999999999999999
Q ss_pred cHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHH
Q 012802 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (456)
Q Consensus 143 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (456)
++++|+.++++|+|||+.++.. |+..++++++||+..++.... ...++|+|||++|+|||||+.++++
T Consensus 720 ~~~eL~~l~~~EaGKt~~~A~~-EV~eaidflryyA~~a~~~~~-----------~~~~~PlGVV~~IsPWNFPlai~~g 787 (1318)
T PRK11809 720 QMQTLMGLLVREAGKTFSNAIA-EVREAVDFLRYYAGQVRDDFD-----------NDTHRPLGPVVCISPWNFPLAIFTG 787 (1318)
T ss_pred CHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcC-----------CceeecccEEEEECCCccHHHHHHH
Confidence 9999999999999999999764 999999999999988764311 2458999999999999999999999
Q ss_pred HHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHH
Q 012802 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (456)
Q Consensus 223 ~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~a 302 (456)
++++||++||+||+|||+++|+++..++++|+++|+|+|++|+++|++.+++..|+.|++|++|+||||+++|+.|++.+
T Consensus 788 ~iaaALaAGN~VV~KPseqTpl~a~~lv~ll~eAGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~a 867 (1318)
T PRK11809 788 QVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNL 867 (1318)
T ss_pred HHHHHHHcCCeEEEeCCCCcHHHHHHHHHHHHHhCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999998
Q ss_pred hhCCC------CcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhccc
Q 012802 303 AKSNL------KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 376 (456)
Q Consensus 303 a~~~~------~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~ 376 (456)
++ ++ +|+++|+||+|++||++|||+|+|++.+++|+|.++||.|++++++|||++++|+|+++|+++++++++
T Consensus 868 A~-~l~~~g~~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e~Iad~fl~~L~~a~~~l~v 946 (1318)
T PRK11809 868 AG-RLDPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVADRTLKMLRGAMAECRM 946 (1318)
T ss_pred hh-hcccccCceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEcHHHHHHHHHHHHHHHHhcCC
Confidence 86 43 799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccC---CCCceEecEEEeeCCCCCcccccccccceeEEE
Q 012802 377 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSIL 453 (456)
Q Consensus 377 G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~---~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~ 453 (456)
|||.+.++++||+|++.+++++.++|++++++|+++++||.... ++|+|++|||+.. +++.++++|+||||++|+
T Consensus 947 GdP~~~~tdvGPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~~~~~~G~fv~PTIi~~--~~~~~l~eEiFGPVL~V~ 1024 (1318)
T PRK11809 947 GNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPPTLIEL--DSFDELKREVFGPVLHVV 1024 (1318)
T ss_pred CCcccccCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCCCCCCCeEEeeEEEec--cchhhhcCcccCceEEEE
Confidence 99999999999999999999999999999999999999875422 4699999999974 678899999999999999
Q ss_pred EeC
Q 012802 454 KYK 456 (456)
Q Consensus 454 ~~~ 456 (456)
+|+
T Consensus 1025 ~~~ 1027 (1318)
T PRK11809 1025 RYN 1027 (1318)
T ss_pred EeC
Confidence 994
|
|
| >cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-74 Score=594.35 Aligned_cols=346 Identities=36% Similarity=0.560 Sum_probs=326.5
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhh
Q 012802 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184 (456)
Q Consensus 105 v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~ 184 (456)
++++++.|++||+ .|+.++.++|.++|+++++.|+++.++|++++++|+|||..+++. |+..+++.++|++..+++.
T Consensus 1 v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~ 77 (429)
T cd07100 1 IEAALDRAHAAFL--AWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEARA-EVEKCAWICRYYAENAEAF 77 (429)
T ss_pred CHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHh
Confidence 4789999999999 999999999999999999999999999999999999999999874 9999999999999988876
Q ss_pred cC-cccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeE
Q 012802 185 QG-LTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVL 263 (456)
Q Consensus 185 ~~-~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv 263 (456)
.+ ...+.+ +...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|+++|.++|+|+|++
T Consensus 78 ~~~~~~~~~-~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~aglP~gvv 156 (429)
T cd07100 78 LADEPIETD-AGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVF 156 (429)
T ss_pred cCCeeccCC-CceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCcE
Confidence 43 323322 4567889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccC
Q 012802 264 NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 343 (456)
Q Consensus 264 ~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~ 343 (456)
|++++++ +.+..|+.|++|+.|.||||+++|+.|++.+++ ++||+++|+|||||+||++|||++.|++.+++++|.|+
T Consensus 157 ~~v~g~~-~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~-~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~ 234 (429)
T cd07100 157 QNLLIDS-DQVEAIIADPRVRGVTLTGSERAGRAVAAEAGK-NLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNA 234 (429)
T ss_pred EEEeCCc-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhcc
Confidence 9999855 467889999999999999999999999999887 89999999999999999999999999999999999999
Q ss_pred CCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCC
Q 012802 344 GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 423 (456)
Q Consensus 344 GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g 423 (456)
||.|++++|||||+++||+|+++|++++.++++|+|+++++++||++++.+++++.++|++++++|+++++||...+..|
T Consensus 235 GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g 314 (429)
T cd07100 235 GQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPDGPG 314 (429)
T ss_pred CCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999997654468
Q ss_pred ceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 424 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 424 ~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+|++|||+.+++++|++++||+||||++|++|+
T Consensus 315 ~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~ 347 (429)
T cd07100 315 AFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVK 347 (429)
T ss_pred eEEcCEEeecCCCCCHHHhCCCCCCeEEEeeeC
Confidence 999999999999999999999999999999986
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. |
| >cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-73 Score=589.77 Aligned_cols=348 Identities=34% Similarity=0.495 Sum_probs=327.3
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHh
Q 012802 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 183 (456)
Q Consensus 104 ~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~ 183 (456)
|++++++.|++||+ .|+.+|.++|.++|+++++.|+++.++|++++++|+|||+.++. .|+..+++.++|++....+
T Consensus 1 ~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~~~~~~~ 77 (431)
T cd07095 1 QVDAAVAAARAAFP--GWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQ-TEVAAMAGKIDISIKAYHE 77 (431)
T ss_pred CHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 57899999999999 99999999999999999999999999999999999999999987 4999999999999988777
Q ss_pred hcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeE
Q 012802 184 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVL 263 (456)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv 263 (456)
..+.......+...+++++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++..+.++|.++|+|+|++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~ag~P~g~~ 157 (431)
T cd07095 78 RTGERATPMAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVL 157 (431)
T ss_pred hcCCcccCCCCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHHhCcChhHh
Confidence 65544332335577899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccC
Q 012802 264 NIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 343 (456)
Q Consensus 264 ~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~ 343 (456)
|++++ +.+.+..|++|+++|.|+||||+.+|+.|++.++.+.++++++|+|||||+||++|||++.|++.+++++|.|+
T Consensus 158 ~~v~g-~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~~~~~~ 236 (431)
T cd07095 158 NLVQG-GRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTA 236 (431)
T ss_pred eEEeC-cHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhC
Confidence 99998 45678999999999999999999999999998876467999999999999999999999999999999999999
Q ss_pred CCcccCCceeEeccc-hHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCC
Q 012802 344 GQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 422 (456)
Q Consensus 344 GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~ 422 (456)
||.|++++|||||++ ++|+|+++|.++++++++|+|.++++++||+++..+++++.+++++++++|+++++||...+++
T Consensus 237 GQ~C~a~~rv~V~~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~~~~~~ 316 (431)
T cd07095 237 GQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLVAG 316 (431)
T ss_pred CCCCCCCeEEEEcCcchHHHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCCcCCCC
Confidence 999999999999999 9999999999999999999999999999999999999999999999999999999999765557
Q ss_pred CceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 423 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 423 g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
|+|++|||+ +++++|.+++||+||||++|++|+
T Consensus 317 g~~~~Ptv~-~v~~~~~i~~eE~FgPvl~v~~~~ 349 (431)
T cd07095 317 TAFLSPGII-DVTDAADVPDEEIFGPLLQVYRYD 349 (431)
T ss_pred CeEEcCEEE-ecCCCChHHhCCCcCCeEEEEeeC
Confidence 999999999 699999999999999999999986
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. |
| >cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-73 Score=590.58 Aligned_cols=365 Identities=42% Similarity=0.667 Sum_probs=344.0
Q ss_pred eeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhh
Q 012802 83 FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162 (456)
Q Consensus 83 ~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 162 (456)
|+++||+||+++++++.++.++++++++.|++|+. .|+.++.++|.++|+++++.|+++.++|+++++.|+|||..++
T Consensus 1 ~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 78 (453)
T cd07149 1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAK--EMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIKDA 78 (453)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHH
Confidence 46789999999999999999999999999999999 9999999999999999999999999999999999999999998
Q ss_pred hccchHHHHHHHHHHHHHhHhhcCcccCCC-----CCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEee
Q 012802 163 AQTEVPMTTRLFRYYAGWADKIQGLTAPAD-----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLK 237 (456)
Q Consensus 163 ~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlk 237 (456)
.. |+..+++.++|++....+..+...+.+ .+...+.+++|+|||++|+|||||+...++++++||++||+||+|
T Consensus 79 ~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~K 157 (453)
T cd07149 79 RK-EVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLK 157 (453)
T ss_pred HH-HHHHHHHHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEE
Confidence 74 999999999999988776655433321 133457889999999999999999999999999999999999999
Q ss_pred cCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCC
Q 012802 238 TAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGK 317 (456)
Q Consensus 238 ps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~ 317 (456)
||+.+|+++..+.++|.++|+|+|++|++++++.+++..|..|+++|+|.||||+++|+.|++.++ ++|+++|+|||
T Consensus 158 ps~~~p~~~~~l~~~l~~ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~---~~~~~lelGGk 234 (453)
T cd07149 158 PASQTPLSALKLAELLLEAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG---LKKVTLELGSN 234 (453)
T ss_pred CCCcchHHHHHHHHHHHHcCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHcC---CCceeeecCCC
Confidence 999999999999999999999999999999977777899999999999999999999999998863 68999999999
Q ss_pred CceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHH
Q 012802 318 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 397 (456)
Q Consensus 318 ~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~ 397 (456)
||+||++|+|++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++.++++|+|.++++++||++++.++++
T Consensus 235 ~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~ 314 (453)
T cd07149 235 AAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAER 314 (453)
T ss_pred ceEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHHHHHHHHHHHHHHhCCcCCCCCCCCccccccCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 398 ILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 398 ~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+.+++++++.+|+++++||.. .|+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 315 ~~~~i~~a~~~ga~v~~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~ 370 (453)
T cd07149 315 IEEWVEEAVEGGARLLTGGKR---DGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFD 370 (453)
T ss_pred HHHHHHHHHHCCCEEEeCCCC---CCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeC
Confidence 999999999999999999964 48999999999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >PLN02203 aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-71 Score=578.26 Aligned_cols=349 Identities=26% Similarity=0.382 Sum_probs=324.1
Q ss_pred cCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHH
Q 012802 99 EGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA 178 (456)
Q Consensus 99 ~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a 178 (456)
.++.+|++++++.|++||. .|+.++..+|.++|+++++.|++++++|+++++.|+|||+.++...|+..+++.++|++
T Consensus 2 ~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~~ 79 (484)
T PLN02203 2 EAPGETLEGSVAELRETYE--SGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSANLAL 79 (484)
T ss_pred CCCHHHHHHHHHHHHHHHH--hcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4678999999999999999 99999999999999999999999999999999999999999886669999999999999
Q ss_pred HHhHhhcCcc---cCC-CCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHH
Q 012802 179 GWADKIQGLT---APA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH 254 (456)
Q Consensus 179 ~~~~~~~~~~---~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~ 254 (456)
+..++..+.. .+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++.+++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~ 159 (484)
T PLN02203 80 SNLKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIP 159 (484)
T ss_pred HHHHHHhccccccCCcccCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHH
Confidence 8877764321 121 224567899999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEecc---CCCHHHH
Q 012802 255 EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE---DADVDKA 331 (456)
Q Consensus 255 ~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~---daD~d~a 331 (456)
++ +|+|++|+++| +.+++..|..| .+|.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++ |||+|.|
T Consensus 160 ~~-lP~gvv~vv~g-~~~~~~~l~~~-~vd~v~fTGS~~~G~~v~~~aa~-~l~~v~lElGGknp~iV~~d~~daDl~~a 235 (484)
T PLN02203 160 KY-LDSKAVKVIEG-GPAVGEQLLQH-KWDKIFFTGSPRVGRIIMTAAAK-HLTPVALELGGKCPCIVDSLSSSRDTKVA 235 (484)
T ss_pred Hh-CCcCEEEEEeC-CHHHHHHHHhC-CCCEEEEECCHHHHHHHHHHHHh-cCCCEEEEecCCCeEEEccCCCCCCHHHH
Confidence 95 99999999998 67889999999 59999999999999999999987 8999999999999999997 6999999
Q ss_pred HHHHHHHHhc-cCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCC
Q 012802 332 AELAHYALFF-NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGA 410 (456)
Q Consensus 332 a~~i~~~~~~-~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga 410 (456)
++.+++++|. |+||.|++++|+|||++++|+|+++|.+++.++++|+|.++ +++||++++.+++++.++|++++++ +
T Consensus 236 a~~i~~~~f~~~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~p~~~-~~~Gpli~~~~~~~v~~~i~~a~~~-~ 313 (484)
T PLN02203 236 VNRIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRES-KSMARILNKKHFQRLSNLLKDPRVA-A 313 (484)
T ss_pred HHHHHHHhcccCCCCccccCCeEEEcHHHHHHHHHHHHHHHHHhcCCCCCcC-CCcCCCCCHHHHHHHHHHHHHHHhC-C
Confidence 9999999996 89999999999999999999999999999999999999886 6899999999999999999999887 7
Q ss_pred EEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 411 KLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 411 ~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++++||.. +++|+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 314 ~~~~gg~~-~~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~ 358 (484)
T PLN02203 314 SIVHGGSI-DEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVK 358 (484)
T ss_pred eEEeCCCc-CCCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeC
Confidence 89999865 3469999999999999999999999999999999996
|
|
| >cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-72 Score=575.38 Aligned_cols=346 Identities=29% Similarity=0.394 Sum_probs=321.9
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHH
Q 012802 100 GEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179 (456)
Q Consensus 100 ~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~ 179 (456)
++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++++++|++++++|+|||+.++...|+..+++.++|++.
T Consensus 2 ~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~ 79 (436)
T cd07135 2 TPLDEIDSIHSRLRATFR--SGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLK 79 (436)
T ss_pred CCHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHH
Confidence 578999999999999999 999999999999999999999999999999999999999988865699999999999999
Q ss_pred HhHhhcCcccCCC-----CCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHH
Q 012802 180 WADKIQGLTAPAD-----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH 254 (456)
Q Consensus 180 ~~~~~~~~~~~~~-----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~ 254 (456)
.++++........ .+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l~~ 159 (436)
T cd07135 80 NLKKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVP 159 (436)
T ss_pred HHHHhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHH
Confidence 8876543222111 13457889999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHH
Q 012802 255 EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAEL 334 (456)
Q Consensus 255 ~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~ 334 (456)
+ |+|+|++|++++++.+.+ .|+.|+ +|.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|||+|.|++.
T Consensus 160 ~-~lP~g~v~vv~g~~~~~~-~l~~~~-vd~v~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~~~~iV~~dADl~~aa~~ 235 (436)
T cd07135 160 K-YLDPDAFQVVQGGVPETT-ALLEQK-FDKIFYTGSGRVGRIIAEAAAK-HLTPVTLELGGKSPVIVTKNADLELAAKR 235 (436)
T ss_pred H-hCCcCEEEEEcCCchhHH-HHHhCC-CCEEEEECCcHHHHHHHHHHHh-cCCCeEEEccCCCcEEECCCCCHHHHHHH
Confidence 9 699999999998666654 588899 9999999999999999998887 89999999999999999999999999999
Q ss_pred HHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEe
Q 012802 335 AHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLET 414 (456)
Q Consensus 335 i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~ 414 (456)
+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+| ++++++||+++..+++++.++++++ |+++++
T Consensus 236 i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~i~~~v~~a---g~~v~~ 311 (436)
T cd07135 236 ILWGKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGA-NASPDYTRIVNPRHFNRLKSLLDTT---KGKVVI 311 (436)
T ss_pred HHHHHhccCCceecCCCEEeccHHHHHHHHHHHHHHHHHhcCCCC-CCCCCcCCCCCHHHHHHHHHHHHhc---CCeEEE
Confidence 999999999999999999999999999999999999999999999 8999999999999999999999986 889999
Q ss_pred CCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 415 GGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 415 gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
||... ++|+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 312 gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~ 352 (436)
T cd07135 312 GGEMD-EATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVD 352 (436)
T ss_pred CCCcC-CCCCEEccEEEecCCCccHHHhccccCCceEEEecC
Confidence 99764 468999999999999999999999999999999986
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-72 Score=625.68 Aligned_cols=373 Identities=34% Similarity=0.518 Sum_probs=347.2
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 012802 65 YTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (456)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (456)
..+.+|+|+.. .+.+++++||.| ++++++++.++.+++++|++.|++||+ .|+.++.++|.++|+++++.|+++
T Consensus 554 ~~~~~i~g~~~---~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Av~aA~~A~~--~W~~~~~~~Ra~iL~raAdll~~~ 628 (1208)
T PRK11905 554 HAAPLLAGGDV---DGGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFP--EWSATPAAERAAILERAADLMEAH 628 (1208)
T ss_pred eecceeccccc---cCCeeeEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHh
Confidence 34667777654 245689999999 999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHH
Q 012802 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (456)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (456)
+++|+.++++|+||++.++. .|+..++++++||+..+++..+ ...++|+|||++|+|||||+.+++++
T Consensus 629 ~~eL~~l~~~E~GKt~~ea~-~Ev~eaid~lr~ya~~a~~~~~-----------~~~~~P~GVv~~IsPwNfPlai~~g~ 696 (1208)
T PRK11905 629 MPELFALAVREAGKTLANAI-AEVREAVDFLRYYAAQARRLLN-----------GPGHKPLGPVVCISPWNFPLAIFTGQ 696 (1208)
T ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcC-----------CceecCccEEEEEcCCcCHHHHHHHH
Confidence 99999999999999999986 4999999999999998765532 13578999999999999999999999
Q ss_pred HhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHh
Q 012802 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (456)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa 303 (456)
+++||++||+||+|||+++|+++..++++|.++|+|+|++|+|+|++.+++..|+.|++|++|+||||+++|+.|.+.++
T Consensus 697 i~aALaaGN~VV~KPse~tpl~a~~l~~ll~eAGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~~~A 776 (1208)
T PRK11905 697 IAAALVAGNTVLAKPAEQTPLIAARAVRLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLA 776 (1208)
T ss_pred HHHHHHcCCEEEEeCCcccHHHHHHHHHHHHHcCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999988
Q ss_pred hC--CCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCC
Q 012802 304 KS--NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381 (456)
Q Consensus 304 ~~--~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~ 381 (456)
.+ ..+|+++|+|||||+||++|||+|.|++.+++|+|.++||.|++++++|||++++|+|+++|+++++++++|||.+
T Consensus 777 ~~~~~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~f~e~L~~~~~~l~vGdP~d 856 (1208)
T PRK11905 777 KRSGPPVPLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVADRVLTMLKGAMDELRIGDPWR 856 (1208)
T ss_pred hhcCCCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEehhHHHHHHHHHHHHHHHhcCCCchh
Confidence 73 2589999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccC-CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 382 ~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
.++++||+|++.+++++.++|++++++|+.++.|+.... ++|+|+.|||+.. +++.++++|+||||++|++|+
T Consensus 857 ~~t~~GPvId~~a~~~i~~~I~~a~~~G~~l~~g~~~~~~~~G~fv~PTVl~~--~~~~~~~eEiFGPVL~V~~y~ 930 (1208)
T PRK11905 857 LSTDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETEKGTFVAPTLIEI--DSISDLEREVFGPVLHVVRFK 930 (1208)
T ss_pred ccCCccCccCHHHHHHHHHHHHHHHHCCCEEEEccCCCCCCCCeEEeeEEEec--CChHHhcCCccCceEEEEEeC
Confidence 999999999999999999999999999999888764322 4699999999973 678999999999999999995
|
|
| >TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-71 Score=581.14 Aligned_cols=359 Identities=20% Similarity=0.234 Sum_probs=318.4
Q ss_pred eeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhh
Q 012802 84 PTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163 (456)
Q Consensus 84 ~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~ 163 (456)
.-+||+|++++++++.++. ++++++|++||+ .|+++++.+|.++|+++++.|+++.++|++++++|+|||+.+++
T Consensus 68 ~e~~P~t~~~~~~~~~~~~---~~av~aA~~A~~--~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~a~ 142 (551)
T TIGR02288 68 GERSPYGVELGVTYPQCDG---DALLDAAHAALP--GWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMMAF 142 (551)
T ss_pred cccCCCCCCEEEEEcCCCH---HHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHH
Confidence 3459999999999999985 899999999999 99999999999999999999999999999999999999998763
Q ss_pred c-c---chHHHHHHHHHHHHHhHhhcCccc---CCC-C---CceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCC
Q 012802 164 Q-T---EVPMTTRLFRYYAGWADKIQGLTA---PAD-G---PYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGN 232 (456)
Q Consensus 164 ~-~---ev~~~~~~l~~~a~~~~~~~~~~~---~~~-~---~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN 232 (456)
. + ++...++.++|+++...++.+... +.. . ....+..++|+||+++|+|||||+++.++++++||++||
T Consensus 143 e~gkp~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaaGN 222 (551)
T TIGR02288 143 QAGGPHAQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGN 222 (551)
T ss_pred hccChHHHHHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHcCC
Confidence 2 2 677889999999998877765433 211 1 112234789999999999999999999999999999999
Q ss_pred EEEeecCCCChhHHH----HHHHHHHHcCCCCCeEEEecCC-chHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCC
Q 012802 233 TIVLKTAEQTPLSAL----YVSKLLHEAGLPPGVLNIVSGY-GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNL 307 (456)
Q Consensus 233 ~VVlkps~~~p~~~~----~l~~~l~~aGlP~gvv~vv~g~-~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~ 307 (456)
+||+|||+.+|+++. .+.++|.++|+|+|+||+++++ +.++++.|+.||+|++|.||||+.+|+.|++.++.
T Consensus 223 ~VVlKPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~G~~I~~~aa~--- 299 (551)
T TIGR02288 223 PVLVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNARQ--- 299 (551)
T ss_pred eEEEECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHHHHHHHHhccc---
Confidence 999999999999765 5779999999999999999985 67789999999999999999999999999998763
Q ss_pred CcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccc---------hHHHHHHHHHHHhhhcccCC
Q 012802 308 KPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES---------VYDQFVEKANALAMKRVVGD 378 (456)
Q Consensus 308 ~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~---------i~d~f~~~l~~~~~~~~~G~ 378 (456)
+++++|+|||||+||++|+|+|.+++.+++++|.|+||.|++++|+|||++ +||+|+++|+++++++ +||
T Consensus 300 ~~v~lElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~def~~~L~~~~~~l-vGd 378 (551)
T TIGR02288 300 AQVYTEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDGL-LGD 378 (551)
T ss_pred CcEEeecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEeccccccccchhHHHHHHHHHHHHHHHh-cCC
Confidence 799999999999999999999999999999999999999999999999999 7999999999999999 999
Q ss_pred CCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccC---CCC-ceEecEEEeeCCCCCcccccccccceeEEEE
Q 012802 379 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG---AKG-YYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 454 (456)
Q Consensus 379 p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~---~~g-~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~ 454 (456)
|.++.+++||+++..+++++ ++++++| ++++||.... ..| +|++|||+....++|.+++||+||||++|++
T Consensus 379 p~~~~~~~Gplis~~~~~ri----~~a~~~G-~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~ 453 (551)
T TIGR02288 379 PARATAVLGAIQSPDTLARI----AEARALG-EVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPIAFVVA 453 (551)
T ss_pred cccccccccCcCCHHHHHHH----HHHHhCC-CEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCCEEEEEE
Confidence 99999999999999999996 5566678 5666664421 134 6899999954445999999999999999999
Q ss_pred eC
Q 012802 455 YK 456 (456)
Q Consensus 455 ~~ 456 (456)
|+
T Consensus 454 ~~ 455 (551)
T TIGR02288 454 VD 455 (551)
T ss_pred EC
Confidence 96
|
This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. |
| >cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-71 Score=573.78 Aligned_cols=346 Identities=41% Similarity=0.667 Sum_probs=327.4
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHh
Q 012802 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 183 (456)
Q Consensus 104 ~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~ 183 (456)
|++++++.|++|++ .|+.++..+|.++|+++++.|++++++|+++++.|+|||..++.. |+..+++.++|++.+.++
T Consensus 1 ~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~-ei~~~~~~l~~~~~~~~~ 77 (431)
T cd07104 1 DVDRAYAAAAAAQK--AWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAAF-EVGAAIAILREAAGLPRR 77 (431)
T ss_pred CHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 57899999999999 999999999999999999999999999999999999999998764 999999999999998876
Q ss_pred hcCcccCCC-CCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhH-HHHHHHHHHHcCCCCC
Q 012802 184 IQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS-ALYVSKLLHEAGLPPG 261 (456)
Q Consensus 184 ~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~-~~~l~~~l~~aGlP~g 261 (456)
..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+ +..+.+++.++|+|+|
T Consensus 78 ~~~~~~~~~~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aGlP~g 157 (431)
T cd07104 78 PEGEILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKG 157 (431)
T ss_pred hcCccccCCCCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHHHHHHHcCCCcc
Confidence 655444332 35667899999999999999999999999999999999999999999999998 6789999999999999
Q ss_pred eEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhc
Q 012802 262 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 341 (456)
Q Consensus 262 vv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~ 341 (456)
++|++++++.+.+..|+.|++++.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.|++++|.
T Consensus 158 vv~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~ 236 (431)
T cd07104 158 VLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGR-HLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFL 236 (431)
T ss_pred cEEEeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHh
Confidence 9999999777789999999999999999999999999999987 899999999999999999999999999999999999
Q ss_pred cCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCC
Q 012802 342 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 421 (456)
Q Consensus 342 ~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~ 421 (456)
|+||.|+++++||||++++|+|+++|.+++.++++|+|.++++++||++++.+++++.+++++++.+|+++++||..
T Consensus 237 ~~GQ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~~--- 313 (431)
T cd07104 237 HQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTY--- 313 (431)
T ss_pred cCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999964
Q ss_pred CCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 422 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 422 ~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 314 ~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~ 348 (431)
T cd07104 314 EGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFD 348 (431)
T ss_pred CCceECCEEeecCCCCChhhhCcCcCCeEEEEEEC
Confidence 48999999999999999999999999999999986
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. |
| >cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-71 Score=572.32 Aligned_cols=344 Identities=39% Similarity=0.607 Sum_probs=321.3
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHh
Q 012802 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 183 (456)
Q Consensus 104 ~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~ 183 (456)
|++++++.|++||+ .|++++.++|.++|+++++.|+++.++|++++++|+|||..++. .|+..+++.++|+++..++
T Consensus 1 ~v~~ai~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~-~ei~~~~~~l~~~~~~~~~ 77 (432)
T cd07105 1 DADQAVEAAAAAFP--AWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAG-FNVDLAAGMLREAASLITQ 77 (432)
T ss_pred CHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 57899999999999 99999999999999999999999999999999999999987765 4999999999999998876
Q ss_pred hcCcccCCC-CCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCe
Q 012802 184 IQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGV 262 (456)
Q Consensus 184 ~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gv 262 (456)
..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~aGlP~gv 157 (432)
T cd07105 78 IIGGSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGV 157 (432)
T ss_pred hcCeecccCCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHcCcCCCc
Confidence 644433322 3456788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCC---chHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHH
Q 012802 263 LNIVSGY---GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYAL 339 (456)
Q Consensus 263 v~vv~g~---~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~ 339 (456)
+|+++++ +.+++..|+.|++++.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|+|++.|++.+++++
T Consensus 158 ~~~v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~-~~~~~~lElgGk~p~iV~~dadl~~aa~~i~~~~ 236 (432)
T cd07105 158 LNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAK-HLKPVLLELGGKAPAIVLEDADLDAAANAALFGA 236 (432)
T ss_pred EEEEeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeEEEeCCCCCceEECCCCCHHHHHHHHHHHH
Confidence 9999974 34578999999999999999999999999999887 8999999999999999999999999999999999
Q ss_pred hccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCccc
Q 012802 340 FFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 419 (456)
Q Consensus 340 ~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~ 419 (456)
|.|+||.|+++++||||+++||+|+++|.+++.++++| ++++||++++.+++++.++|++++++|+++++||...
T Consensus 237 ~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g-----~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~ 311 (432)
T cd07105 237 FLNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAG-----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLAD 311 (432)
T ss_pred HhcCCCCCcCCceEEEcHHHHHHHHHHHHHHHHhhcCC-----CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcC
Confidence 99999999999999999999999999999999999988 5899999999999999999999999999999999764
Q ss_pred C-CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 420 G-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 420 ~-~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
. .+|+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 312 ~~~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~ 349 (432)
T cd07105 312 ESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVK 349 (432)
T ss_pred CCCCCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeC
Confidence 2 468999999999999999999999999999999986
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. |
| >PRK10090 aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-71 Score=566.76 Aligned_cols=322 Identities=36% Similarity=0.635 Sum_probs=304.7
Q ss_pred HHHHHHHHHhcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCC-CCceEEEEEccceEEEEEc
Q 012802 133 ILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQII 211 (456)
Q Consensus 133 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~ 211 (456)
|+++++.|++++++|++++++|+|||+.++. .|+..+++.++|++.+++...+...+.. .+...+++++|+|||++|+
T Consensus 1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~ 79 (409)
T PRK10090 1 LRKIAAGIRERASEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGIL 79 (409)
T ss_pred CHHHHHHHHHCHHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccCCCCCCceeEEEEecccEEEEEC
Confidence 5789999999999999999999999999987 4999999999999999887766443322 2346788999999999999
Q ss_pred CcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCC
Q 012802 212 PWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGS 291 (456)
Q Consensus 212 p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS 291 (456)
|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|++.+.+..|..|+++|.|+||||
T Consensus 80 p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~V~ftGs 159 (409)
T PRK10090 80 PWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGS 159 (409)
T ss_pred CCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCCCcccEEEEeCCChhHHHHHhcCCCcCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999977788999999999999999999
Q ss_pred hHHHHHHHHHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHh
Q 012802 292 TTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALA 371 (456)
Q Consensus 292 ~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~ 371 (456)
+.+|+.|++.++. ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.+++
T Consensus 160 ~~~g~~v~~~aa~-~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~ 238 (409)
T PRK10090 160 VSAGEKIMAAAAK-NITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAM 238 (409)
T ss_pred HHHHHHHHHHHHh-cCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEcHHHHHHHHHHHHHHH
Confidence 9999999999887 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCC-CCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCccccccccccee
Q 012802 372 MKRVVGDPFKG-GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQ 450 (456)
Q Consensus 372 ~~~~~G~p~~~-~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl 450 (456)
+++++|||+++ ++++||++++.+++++.++|++++++|+++++||....+.|+|++|||+.+++++|++++||+||||+
T Consensus 239 ~~~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl 318 (409)
T PRK10090 239 QAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVL 318 (409)
T ss_pred HhcCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEecEEEeCCCCCCHHHhCCCCCceE
Confidence 99999999998 99999999999999999999999999999999997755568999999999999999999999999999
Q ss_pred EEEEeC
Q 012802 451 SILKYK 456 (456)
Q Consensus 451 ~v~~~~ 456 (456)
+|++|+
T Consensus 319 ~v~~~~ 324 (409)
T PRK10090 319 PVVAFD 324 (409)
T ss_pred EEEEEC
Confidence 999986
|
|
| >PTZ00381 aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-70 Score=573.06 Aligned_cols=347 Identities=30% Similarity=0.443 Sum_probs=320.4
Q ss_pred cCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHH
Q 012802 99 EGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA 178 (456)
Q Consensus 99 ~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a 178 (456)
..+.+|++++++.+++||. .|+.++.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.++|++
T Consensus 3 ~~~~~~i~~av~~a~~a~~--~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~~~~ 80 (493)
T PTZ00381 3 PDNPEIIPPIVKKLKESFL--TGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLL 80 (493)
T ss_pred CCCHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4678999999999999999 99999999999999999999999999999999999999999887779999999999999
Q ss_pred HHhHhhcCcc-cC---CCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHH
Q 012802 179 GWADKIQGLT-AP---ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH 254 (456)
Q Consensus 179 ~~~~~~~~~~-~~---~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~ 254 (456)
+..++..... .. ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~ 160 (493)
T PTZ00381 81 KHLDEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLT 160 (493)
T ss_pred HHHHHHhCCcccCCccccCCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHH
Confidence 8776653322 11 1123457889999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHH
Q 012802 255 EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAEL 334 (456)
Q Consensus 255 ~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~ 334 (456)
++ +|+|++++++| +.+.+..|..|+ +|+|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.
T Consensus 161 ~~-lp~~~v~vv~g-~~~~~~~l~~~~-~d~i~FTGS~~vG~~V~~~aa~-~l~pv~lElGGk~p~iV~~dAdl~~Aa~~ 236 (493)
T PTZ00381 161 KY-LDPSYVRVIEG-GVEVTTELLKEP-FDHIFFTGSPRVGKLVMQAAAE-NLTPCTLELGGKSPVIVDKSCNLKVAARR 236 (493)
T ss_pred Hh-CCcCEEEEecC-CHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHh-cCCcEEEEcCCCCceEEcCCCCHHHHHHH
Confidence 95 99999999998 667788888887 9999999999999999999887 89999999999999999999999999999
Q ss_pred HHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEe
Q 012802 335 AHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLET 414 (456)
Q Consensus 335 i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~ 414 (456)
+++++|.|+||.|++++++|||++++|+|+++|++.++++. |++.++++++||+++.++++++.++++ ++|+++++
T Consensus 237 i~~g~~~naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~ri~~~i~---~~ga~~~~ 312 (493)
T PTZ00381 237 IAWGKFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFF-GEDPKKSEDYSRIVNEFHTKRLAELIK---DHGGKVVY 312 (493)
T ss_pred HHHHHHhhcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHHHh-CCCCccCCCcCCCCCHHHHHHHHHHHH---hCCCcEEE
Confidence 99999999999999999999999999999999999999985 666678899999999999999999996 36999999
Q ss_pred CCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 415 GGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 415 gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
||.. +.+++|++|||+.+++++|++++||+||||++|++|+
T Consensus 313 gG~~-~~~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 353 (493)
T PTZ00381 313 GGEV-DIENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYE 353 (493)
T ss_pred CCCc-CCCCCeEeeEEEecCCCCChHHhccccCCeEEEEeeC
Confidence 9975 3468999999999999999999999999999999996
|
|
| >cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-70 Score=563.92 Aligned_cols=341 Identities=31% Similarity=0.451 Sum_probs=314.8
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcC
Q 012802 107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186 (456)
Q Consensus 107 ~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~ 186 (456)
++++.|++||. .|+.++..+|.++|+++++.|++++++|++++++|+|||+.++...|+..+++.++|++....+..+
T Consensus 3 ~a~~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~ 80 (432)
T cd07137 3 RLVRELRETFR--SGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKWMA 80 (432)
T ss_pred HHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 47899999999 9999999999999999999999999999999999999999887656999999999999988766443
Q ss_pred cc---cCC-CCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCe
Q 012802 187 LT---APA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGV 262 (456)
Q Consensus 187 ~~---~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gv 262 (456)
.. .+. ......++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..++++|.++ +|+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~~-~P~gv 159 (432)
T cd07137 81 PEKVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPEY-LDTKA 159 (432)
T ss_pred CcccCCCcccCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCe
Confidence 21 111 12335678999999999999999999999999999999999999999999999999999999995 99999
Q ss_pred EEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHh-c
Q 012802 263 LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF-F 341 (456)
Q Consensus 263 v~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~-~ 341 (456)
+|+++| +.+.+..|+.| .++.|+||||+.+|+.|++.++. +++|+++|+|||||+||++|||++.|++.+++++| .
T Consensus 160 v~~v~g-~~~~~~~L~~~-~i~~v~fTGs~~~g~~v~~~aa~-~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f~~ 236 (432)
T cd07137 160 IKVIEG-GVPETTALLEQ-KWDKIFFTGSPRVGRIIMAAAAK-HLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGC 236 (432)
T ss_pred EEEEeC-CHHHHHHHHhC-CCCEEEEECChHHHHHHHHHHHh-cCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhhhc
Confidence 999998 55678888887 69999999999999999999887 89999999999999999999999999999999999 5
Q ss_pred cCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCC
Q 012802 342 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 421 (456)
Q Consensus 342 ~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~ 421 (456)
|+||.|++++|+|||++++|+|+++|.+++.++++||| ++++++||++++.+++++.++|++++. |+++++||.. +.
T Consensus 237 ~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~v~~~i~~a~~-ga~~l~gg~~-~~ 313 (432)
T cd07137 237 NNGQACIAPDYVLVEESFAPTLIDALKNTLEKFFGENP-KESKDLSRIVNSHHFQRLSRLLDDPSV-ADKIVHGGER-DE 313 (432)
T ss_pred cCCCcccCCCEEEEcHHHHHHHHHHHHHHHHHHhCCCC-CccCCcCCcCCHHHHHHHHHHHHHHHh-CCeEEeCCCc-CC
Confidence 99999999999999999999999999999999999999 568999999999999999999999998 9999999965 34
Q ss_pred CCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 422 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 422 ~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 314 ~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~ 348 (432)
T cd07137 314 KNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVK 348 (432)
T ss_pred CCCEEeeEEEecCCCcchhhhcccccCceEEEEeC
Confidence 69999999999999999999999999999999986
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. |
| >cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-70 Score=565.51 Aligned_cols=337 Identities=31% Similarity=0.461 Sum_probs=312.3
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcC
Q 012802 107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186 (456)
Q Consensus 107 ~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~ 186 (456)
+.+++|++||+ .|+.++..+|.++|+++++.|+++.++|++++++|+|||+.++...|+..+++.++|++..+++..+
T Consensus 2 ~~v~~a~~a~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~ 79 (449)
T cd07136 2 SLVEKQRAFFK--TGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMK 79 (449)
T ss_pred hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 56889999999 9999999999999999999999999999999999999999998766999999999999998877644
Q ss_pred c-ccCCC---CCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCe
Q 012802 187 L-TAPAD---GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGV 262 (456)
Q Consensus 187 ~-~~~~~---~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gv 262 (456)
. ..+.. .+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++ +|+|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~a-lP~gv 158 (449)
T cd07136 80 PKRVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEET-FDEEY 158 (449)
T ss_pred CCccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHHh-CCCCE
Confidence 3 22211 2446788999999999999999999999999999999999999999999999999999999998 99999
Q ss_pred EEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhcc
Q 012802 263 LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 342 (456)
Q Consensus 263 v~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~ 342 (456)
+|+++| +.+.+..|+.|+ ||.|.||||+++|+.|++.+++ +++|+++|+|||||+||++|||+|.|++.+++++|.|
T Consensus 159 ~~~v~g-~~~~~~~L~~~~-v~~V~fTGS~~~g~~i~~~aa~-~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~~~ 235 (449)
T cd07136 159 VAVVEG-GVEENQELLDQK-FDYIFFTGSVRVGKIVMEAAAK-HLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLN 235 (449)
T ss_pred EEEEeC-ChHHHHHHhcCC-CCEEEEECCHHHHHHHHHHHHh-cCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHHcc
Confidence 999998 456678888765 9999999999999999999887 7899999999999999999999999999999999999
Q ss_pred CCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCC
Q 012802 343 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 422 (456)
Q Consensus 343 ~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~ 422 (456)
+||.|++++|||||+++||+|+++|+++++++++|+|.+ .+++||++++.+++++.++|+++ ++++||... .+
T Consensus 236 ~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~g~p~~-~~~~gpli~~~~~~~i~~~i~~a-----~~~~gG~~~-~~ 308 (449)
T cd07136 236 AGQTCVAPDYVLVHESVKEKFIKELKEEIKKFYGEDPLE-SPDYGRIINEKHFDRLAGLLDNG-----KIVFGGNTD-RE 308 (449)
T ss_pred cCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCCCCC-CCCccCcCCHHHHHHHHHHHhcc-----eEEECCCcC-CC
Confidence 999999999999999999999999999999999999987 89999999999999999999874 799999753 36
Q ss_pred CceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 423 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 423 g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
|+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 309 g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~ 342 (449)
T cd07136 309 TLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYD 342 (449)
T ss_pred CCEEeeEEEecCCCcChHHhccccCCeeEEEEeC
Confidence 8999999999999999999999999999999996
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. |
| >cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-70 Score=570.54 Aligned_cols=366 Identities=20% Similarity=0.211 Sum_probs=326.7
Q ss_pred CCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcC
Q 012802 77 SASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNG 156 (456)
Q Consensus 77 ~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~G 156 (456)
..++++.+++||+|++++++++.+ |++++++.|++|++ .|+++++++|.++|++++++|++++++|++++++|+|
T Consensus 61 ~~~~~~~~~~~P~~~~l~~~~~~a---dv~~ai~aA~~A~~--~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~G 135 (549)
T cd07127 61 GASGWVGGEVSPYGVELGVTYPQC---DPDALLAAARAAMP--GWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTG 135 (549)
T ss_pred CCCCCeeeeECCCCCcEEEEEchH---HHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHC
Confidence 345678999999999999999887 89999999999999 9999999999999999999999999999999999999
Q ss_pred CChhhhhc----cchHHHHHHHHHHHHHhHhhcCcccC---CC----CCceEEEEEccceEEEEEcCcChhHHHHHHHHh
Q 012802 157 KPFEQSAQ----TEVPMTTRLFRYYAGWADKIQGLTAP---AD----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225 (456)
Q Consensus 157 k~~~~a~~----~ev~~~~~~l~~~a~~~~~~~~~~~~---~~----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 225 (456)
|++.++.. .|+..+++.++|+++...++.+.... .. ........++|+||+++|+|||||+++.+.+++
T Consensus 136 k~~~~a~qa~~~~evd~a~e~~~~a~~~~~~~~~~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~ 215 (549)
T cd07127 136 QAFMMAFQAGGPHAQDRGLEAVAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVIGCSTFPTWNGYPGLF 215 (549)
T ss_pred CCHHHHHhcccHHHHHHHHHHHHHHHHHHHhccccccccCCCCCcccccccceeEEecccEEEEEeCcCChHHHHHHHHH
Confidence 99977653 27999999999999988877543221 00 011224578999999999999999999999999
Q ss_pred hhhhcCCEEEeecCCCChhHHH----HHHHHHHHcCCCCCeEEEecCC-chHHHHHHHcCCCccEEEEeCChHHHHHHHH
Q 012802 226 PALACGNTIVLKTAEQTPLSAL----YVSKLLHEAGLPPGVLNIVSGY-GPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (456)
Q Consensus 226 ~ALaaGN~VVlkps~~~p~~~~----~l~~~l~~aGlP~gvv~vv~g~-~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~ 300 (456)
+||++||+||+|||+.+|+++. .+.++|.++|+|+|+||+++++ +.+++..|+.|++|++|.||||+.+|+.|.+
T Consensus 216 ~ALaaGN~VVvKPs~~a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~ 295 (549)
T cd07127 216 ASLATGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEA 295 (549)
T ss_pred HHHhcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHH
Confidence 9999999999999999999864 4668999999999999999985 4678999999999999999999999999999
Q ss_pred HHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccc---------hHHHHHHHHHHHh
Q 012802 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES---------VYDQFVEKANALA 371 (456)
Q Consensus 301 ~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~---------i~d~f~~~l~~~~ 371 (456)
.++. +|+++|+||||++||++|+|++.+++.+++++|.|+||.|++++|+|||++ +||+|+++|++++
T Consensus 296 ~a~~---~~v~~ElGGkn~~IV~~dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~~ 372 (549)
T cd07127 296 NARQ---AQVYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAI 372 (549)
T ss_pred Hhcc---CcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHccCCCCCCCCCEEEEECCccccccchhHHHHHHHHHHHHH
Confidence 9864 799999999999999999999999999999999999999999999999999 8999999999999
Q ss_pred hhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccC---CCC-ceEecEEEeeCCCCCccccccccc
Q 012802 372 MKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG---AKG-YYIKPTVFTGVKDDMLIAKDEIFG 447 (456)
Q Consensus 372 ~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~---~~g-~~~~PTvl~~v~~~~~i~~~EifG 447 (456)
+++ +|||.+..+++||++++.+++++.++ ++.|+ +++||.... ..| +|++|||+.+++++|.+++||+||
T Consensus 373 ~~l-~Gdp~~~~~~~Gpli~~~~~~ri~~a----~~~g~-vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FG 446 (549)
T cd07127 373 DGL-LADPARAAALLGAIQSPDTLARIAEA----RQLGE-VLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFG 446 (549)
T ss_pred HHh-cCCccccccccCCcCCHHHHHHHHHH----HhCCC-EEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcC
Confidence 999 99999999999999999999998654 44565 777876431 134 566999999999999999999999
Q ss_pred ceeEEEEeC
Q 012802 448 PVQSILKYK 456 (456)
Q Consensus 448 Pvl~v~~~~ 456 (456)
||++|++|+
T Consensus 447 PVl~V~~~~ 455 (549)
T cd07127 447 PIAFVVATD 455 (549)
T ss_pred ceEEEEEeC
Confidence 999999996
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. |
| >cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-69 Score=558.73 Aligned_cols=341 Identities=31% Similarity=0.435 Sum_probs=313.3
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCC-hhhhhccchHHHHHHHHHHHHHhHhhcC
Q 012802 108 AVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKP-FEQSAQTEVPMTTRLFRYYAGWADKIQG 186 (456)
Q Consensus 108 av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~-~~~a~~~ev~~~~~~l~~~a~~~~~~~~ 186 (456)
.++.|++||. .|+.++..+|.++|+++++.|++++++|++++++|+||+ ..++...|+..+++.++|++....+..+
T Consensus 3 ~~~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~~~~~ 80 (434)
T cd07133 3 LLERQKAAFL--ANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKKWMK 80 (434)
T ss_pred HHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 5678999999 999999999999999999999999999999999999985 5566556999999999999988776543
Q ss_pred ccc-CC---CCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCe
Q 012802 187 LTA-PA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGV 262 (456)
Q Consensus 187 ~~~-~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gv 262 (456)
... .. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..++++|+++ +|+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~a-lP~g~ 159 (434)
T cd07133 81 PSRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEY-FDEDE 159 (434)
T ss_pred CcccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCe
Confidence 321 11 12445788999999999999999999999999999999999999999999999999999999997 99999
Q ss_pred EEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhcc
Q 012802 263 LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 342 (456)
Q Consensus 263 v~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~ 342 (456)
+|+++| +.+.+..|..|+ +|.|+||||+.+|+.|++.++. +++|+++|+|||||+||++|+|++.|++.+++++|.|
T Consensus 160 ~~~v~g-~~~~~~~l~~~~-v~~V~ftGs~~~g~~v~~~aa~-~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~~~ 236 (434)
T cd07133 160 VAVVTG-GADVAAAFSSLP-FDHLLFTGSTAVGRHVMRAAAE-NLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLN 236 (434)
T ss_pred EEEEeC-ChHHHHHHHhCC-CCEEEEeCchHHHHHHHHHHHh-cCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHhcc
Confidence 999998 456788888765 9999999999999999999887 8999999999999999999999999999999999999
Q ss_pred CCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccC--
Q 012802 343 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-- 420 (456)
Q Consensus 343 ~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-- 420 (456)
+||.|++++|||||++++|+|+++|++++.++++|+ ++++++||++++.+++++.++|++++++|+++++||....
T Consensus 237 ~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~--~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~ 314 (434)
T cd07133 237 AGQTCVAPDYVLVPEDKLEEFVAAAKAAVAKMYPTL--ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDF 314 (434)
T ss_pred CCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCC--CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCcCC
Confidence 999999999999999999999999999999999886 4778999999999999999999999999999999997532
Q ss_pred CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 421 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 421 ~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
.+|+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 315 ~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~ 350 (434)
T cd07133 315 AATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYD 350 (434)
T ss_pred CCCcEEeeEEEeCCCCCCcccccccCCCeeEEEEeC
Confidence 468999999999999999999999999999999986
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. |
| >cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-69 Score=554.74 Aligned_cols=343 Identities=35% Similarity=0.436 Sum_probs=318.4
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcC
Q 012802 107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186 (456)
Q Consensus 107 ~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~ 186 (456)
+++++|++||. .|+.++..+|.++|+++++.|++++++|++++++|+|||+.++...|+..+++.++|++....+..+
T Consensus 2 ~~~~~a~~a~~--~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~ 79 (433)
T cd07134 2 RVFAAQQAHAL--ALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKWMK 79 (433)
T ss_pred hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 57889999999 9999999999999999999999999999999999999999987656999999999999987655432
Q ss_pred c-ccCC---CCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCe
Q 012802 187 L-TAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGV 262 (456)
Q Consensus 187 ~-~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gv 262 (456)
. ..+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~a-~p~g~ 158 (433)
T cd07134 80 PKRVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREA-FDEDE 158 (433)
T ss_pred CcccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCE
Confidence 2 1211 12446789999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred EEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhcc
Q 012802 263 LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 342 (456)
Q Consensus 263 v~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~ 342 (456)
++++++ +.+.+..|++|+ ++.|.||||+.+|+.|++.+++ +++|+++|+||+||+||++|||++.|++.+++++|.+
T Consensus 159 v~~v~g-~~~~~~~l~~~~-v~~v~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~~~ 235 (433)
T cd07134 159 VAVFEG-DAEVAQALLELP-FDHIFFTGSPAVGKIVMAAAAK-HLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLN 235 (433)
T ss_pred EEEEeC-ChhHHHHHHhCC-CCEEEEECChHHHHHHHHHHHh-cCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhhcC
Confidence 999998 456788899987 9999999999999999999887 7899999999999999999999999999999999999
Q ss_pred CCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCC-CCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCC
Q 012802 343 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP-FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 421 (456)
Q Consensus 343 ~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p-~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~ 421 (456)
+||.|+++++||||++++|+|+++|++++++++.|+| .++++++||++++.+++++.++|++++++|+++++||... .
T Consensus 236 ~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~-~ 314 (433)
T cd07134 236 AGQTCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFD-A 314 (433)
T ss_pred cCCcccCCcEEEECHHHHHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCcC-C
Confidence 9999999999999999999999999999999988887 8889999999999999999999999999999999999753 4
Q ss_pred CCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 422 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 422 ~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
.|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 315 ~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~ 349 (433)
T cd07134 315 AQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYE 349 (433)
T ss_pred CCCEEeeEEEeCCCCccHHHhccccCceEEEEEeC
Confidence 58999999999999999999999999999999996
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. |
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-69 Score=534.84 Aligned_cols=402 Identities=32% Similarity=0.481 Sum_probs=366.8
Q ss_pred hHHHHHHhhhcccccccccccccCCCCCCCCCCCccCceecCEeeeCCCCCeeeeecCCC-CCEEEEEecCCHHHHHHHH
Q 012802 31 CRAAAAAAASCGYSTASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAV 109 (456)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av 109 (456)
|..-.|++++++++++|++..+ ...+.++....++|+.+. +|++.+++||.+ .++++++..++.+|+++|+
T Consensus 85 NSaG~Dlsne~~la~L~~al~~------~a~~~w~A~p~~~~~~~~--~g~~~pV~nPad~~dvVG~V~ea~~~~v~~A~ 156 (769)
T COG4230 85 NSAGLDLSNEHRLASLSSALLA------SAGQKWQAAPIVNGAPVA--GGEPRPVINPADPDDIVGTVTEATEADVEQAL 156 (769)
T ss_pred cccccCcchHHHHHHHHHHHHh------hhhhhhccccccCCCcCC--CCCcccccCCCCHhHCeeeeeecCHHHHHHHH
Confidence 3355678899999999988655 445677778899998874 568899999998 5788999999999999999
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCccc
Q 012802 110 SAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA 189 (456)
Q Consensus 110 ~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~ 189 (456)
+.|.+|+. .|..+++.+|+.+|+|++++|+.+..+|..++++|.||++..+.. |+.+++++||||+.+++.-.++
T Consensus 157 ~~A~~a~p--~W~atp~~eRAaiL~raAdlme~~m~~L~~L~~REAGKtl~naIA-EVREAVDFlrYYA~~ar~~~g~-- 231 (769)
T COG4230 157 EAAVAAAP--IWSATPPAERAAILERAADLMEAQMPQLMGLLVREAGKTLSNAIA-EVREAVDFLRYYAGQARDTFGN-- 231 (769)
T ss_pred HHHHhhCc--ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHH-HHHHHHHHHHHHHHHHhcccCc--
Confidence 99999999 999999999999999999999999999999999999999999875 9999999999999988753321
Q ss_pred CCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCC
Q 012802 190 PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 269 (456)
Q Consensus 190 ~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~ 269 (456)
..+.|+|++++|+|||||+.++..+++.||++||+|+-||.++||+.+..-+++++++|+|++++|+++|+
T Consensus 232 ---------~~~~~~G~vVcISPWNFPLAIFtGqiaAAL~aGN~VlAKPAEqTpLIAa~aV~ll~eAGvP~~~lqLLpG~ 302 (769)
T COG4230 232 ---------LTHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQLLPGR 302 (769)
T ss_pred ---------cccCCCCcEEEECCCCchHHHHHhHHHHHHHcCCccccCccccccHHHHHHHHHHHHcCCChhhHHhcCCC
Confidence 34689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCC--CCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcc
Q 012802 270 GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN--LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCC 347 (456)
Q Consensus 270 ~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~--~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C 347 (456)
|.++|..|..++++++|+|||||++++.|.+..+++. ..|++.|.||.|++||+.+|--++++..++.|+|..+||.|
T Consensus 303 G~tvGa~L~~darv~GV~FTGSTevA~li~~~LA~r~g~~~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRC 382 (769)
T COG4230 303 GETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGRPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRC 382 (769)
T ss_pred CcccchhhhcCcccceEEEeCcHHHHHHHHHHHhhcCCCCCceEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchh
Confidence 9999999999999999999999999999999988754 67899999999999999999999999999999999999999
Q ss_pred cCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccC-CCCceE
Q 012802 348 CAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYI 426 (456)
Q Consensus 348 ~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~ 426 (456)
.+.+.+|+++++.|..+++|+-.+.++++|+|..-.+|+||+|+.+....++++|+..+.+|-.+..-....+ .+|.|+
T Consensus 383 SALRvLclQ~DvAd~~l~mLKGAm~el~~G~p~~l~tDVGPVIdaEAk~~i~~Hi~~mr~~gr~v~q~~~~~~~q~GtFv 462 (769)
T COG4230 383 SALRVLCLQEDVADRILTMLKGAMAELRVGNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFV 462 (769)
T ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHhccCCccceeccccccccHHHHHHHHHHHHHHHhcccchhhccCCCccCCceee
Confidence 9999999999999999999999999999999999999999999999999999999999988866654333222 479999
Q ss_pred ecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 427 KPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 427 ~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
.||+++- ++..-++.|+|||||.|++|+
T Consensus 463 ~Ptl~El--~~~~eL~rEVFGPVLHVvRy~ 490 (769)
T COG4230 463 APTLIEL--ENLDELQREVFGPVLHVVRYK 490 (769)
T ss_pred CceeEEc--CCHHHHHHHhccceeEEEEec
Confidence 9999976 344557889999999999996
|
|
| >cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-67 Score=545.92 Aligned_cols=337 Identities=31% Similarity=0.426 Sum_probs=308.8
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcC
Q 012802 107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186 (456)
Q Consensus 107 ~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~ 186 (456)
++++.|++||. .|+.++..+|.++|+++++.|++++++|++++++|+|||+.++...|+..+++.++|+++.+++..+
T Consensus 2 ~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~ 79 (443)
T cd07132 2 EAVRRAREAFS--SGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPEWMK 79 (443)
T ss_pred hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 57899999999 9999999999999999999999999999999999999999988767999999999999988776643
Q ss_pred cccC-C---CCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCe
Q 012802 187 LTAP-A---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGV 262 (456)
Q Consensus 187 ~~~~-~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gv 262 (456)
.... . ......++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++ +|+|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~-lp~gv 158 (443)
T cd07132 80 PEPVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKY-LDKEC 158 (443)
T ss_pred CccCCCccccCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCe
Confidence 2211 1 12345788999999999999999999999999999999999999999999999999999999985 99999
Q ss_pred EEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhcc
Q 012802 263 LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 342 (456)
Q Consensus 263 v~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~ 342 (456)
+|++++++.. +..|+. ++||.|.||||+++|+.|.+.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|
T Consensus 159 ~~vv~g~~~~-~~~l~~-~~vd~V~fTGs~~~g~~i~~~a~~-~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f~~ 235 (443)
T cd07132 159 YPVVLGGVEE-TTELLK-QRFDYIFYTGSTSVGKIVMQAAAK-HLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFIN 235 (443)
T ss_pred EEEEeCCHHH-HHHHHh-CCCCEEEEECChHHHHHHHHHHHh-hCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhc
Confidence 9999995444 555665 589999999999999999999887 8999999999999999999999999999999999999
Q ss_pred CCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCC
Q 012802 343 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 422 (456)
Q Consensus 343 ~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~ 422 (456)
+||.|++++|||||++++|+|+++|.+++++++.|+| ++++++||++++.+++++.+++++ +++++||... .+
T Consensus 236 ~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~v~~~i~~-----a~~~~gg~~~-~~ 308 (443)
T cd07132 236 AGQTCIAPDYVLCTPEVQEKFVEALKKTLKEFYGEDP-KESPDYGRIINDRHFQRLKKLLSG-----GKVAIGGQTD-EK 308 (443)
T ss_pred CCCceeCCcEEEEcHHHHHHHHHHHHHHHHHhcCCCC-CcccccCCcCCHHHHHHHHHHHhC-----CEEEeCCccC-CC
Confidence 9999999999999999999999999999999998988 788999999999999999999874 4899999753 46
Q ss_pred CceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 423 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 423 g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 309 ~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~ 342 (443)
T cd07132 309 ERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVN 342 (443)
T ss_pred CCEEeeEEEeCCCCCChHHhccccCceeEEEEeC
Confidence 8999999999999999999999999999999986
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. |
| >cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-66 Score=536.04 Aligned_cols=337 Identities=33% Similarity=0.485 Sum_probs=309.3
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcC
Q 012802 107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186 (456)
Q Consensus 107 ~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~ 186 (456)
++++.|++||. .|+.+|..+|.++|+++++.|++++++|++++++|+|||+.++...|+..+++.++|++...++..+
T Consensus 2 ~~v~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~~~~ 79 (426)
T cd07087 2 ELVARLRETFL--TGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMK 79 (426)
T ss_pred hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 37899999999 9999999999999999999999999999999999999998777666999999999999988776543
Q ss_pred cc-c--C-CCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCe
Q 012802 187 LT-A--P-ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGV 262 (456)
Q Consensus 187 ~~-~--~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gv 262 (456)
.. . + ...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..++++|.+ |+|+|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~-~~P~gv 158 (426)
T cd07087 80 PRRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPK-YFDPEA 158 (426)
T ss_pred CcccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH-hCCCCE
Confidence 21 1 1 11234578899999999999999999999999999999999999999999999999999999999 699999
Q ss_pred EEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhcc
Q 012802 263 LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 342 (456)
Q Consensus 263 v~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~ 342 (456)
+|+++|++ +.+..|+.|+ ++.|.||||+++|+.|++.++. ++||+++|+|||||+||++|||+|.|++.+++++|.|
T Consensus 159 ~~vv~g~~-~~~~~l~~~~-v~~V~ftGs~~~g~~i~~~a~~-~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~ 235 (426)
T cd07087 159 VAVVEGGV-EVATALLAEP-FDHIFFTGSPAVGKIVMEAAAK-HLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLN 235 (426)
T ss_pred EEEEeCCc-hHHHHHHhCC-CCEEEEeCChHHHHHHHHHHHh-hCCceEEeccCCCceEecCCCCHHHHHHHHHHHHHhc
Confidence 99999854 5688899998 9999999999999999999887 7899999999999999999999999999999999999
Q ss_pred CCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCC
Q 012802 343 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAK 422 (456)
Q Consensus 343 ~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~ 422 (456)
+||.|+++++||||++++|+|+++|.+++++++.|+| ++.+++||++++.+++++.++++++ ++++||.. +.+
T Consensus 236 ~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~~~~-~~~~~~gpli~~~~~~~~~~~i~~a-----~v~~gg~~-~~~ 308 (426)
T cd07087 236 AGQTCIAPDYVLVHESIKDELIEELKKAIKEFYGEDP-KESPDYGRIINERHFDRLASLLDDG-----KVVIGGQV-DKE 308 (426)
T ss_pred cCCccccCCEEEEcHHHHHHHHHHHHHHHHHHcCCCC-ccCCCcCCCCCHHHHHHHHHHHhcc-----eEEeCCcc-CCC
Confidence 9999999999999999999999999999999986666 4689999999999999999999865 79999865 346
Q ss_pred CceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 423 GYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 423 g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 309 g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~ 342 (426)
T cd07087 309 ERYIAPTILDDVSPDSPLMQEEIFGPILPILTYD 342 (426)
T ss_pred CCEEeeEEEecCCCCCHHHhcccccceEEEEEeC
Confidence 8999999999999999999999999999999986
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. |
| >KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-67 Score=513.50 Aligned_cols=369 Identities=42% Similarity=0.784 Sum_probs=348.7
Q ss_pred CceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHH
Q 012802 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (456)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ 146 (456)
..||+|+|+.+++++|+.++||.|+.+|++++.++..|+++|+.+|+.||+.|.|.+++..+|.+.|.+++++|++|+++
T Consensus 423 ~~fi~g~fv~~~~~~t~~tinp~~~~~ic~~~la~v~dvd~av~aak~afe~g~w~~~sar~rg~~~y~la~lme~h~ee 502 (881)
T KOG2452|consen 423 QLFIGGEFVDAEGAKTSETINPTDGSVICQVSLAQVTDVDKAVAAAKGAFENGRWGKISARDRGRLMYRLADLMEQHQEE 502 (881)
T ss_pred hhccCcEeecccCCccccccCCCCCCeeEEeehhHhhhHHHHHHHHhhhhhcCcccccchhhhhhhhhhccchhhhccch
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCC----CCceEEEEEccceEEEEEcCcChhHHHHHH
Q 012802 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD----GPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (456)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (456)
|+.+.++|.|--+.-+...-+...++.+|||++|.+++.|.+.|.. +.....+.++|+||+++|.|||||+.++.|
T Consensus 503 lat~e~ldagavytlalkthvgmsi~~~ryfagwcdkiqg~tipi~~arpn~nl~lt~~epigv~g~i~pwnyplmmlsw 582 (881)
T KOG2452|consen 503 LATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLSW 582 (881)
T ss_pred hhhhhhccccceeeeeehhhcCceehHHHHhhhhhhhccCceeccccCCCCCcceeeecCcceeEEEeccCCchHHHHHH
Confidence 9999999999888777777889999999999999999999988854 344567899999999999999999999999
Q ss_pred HHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHH
Q 012802 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (456)
Q Consensus 223 ~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~a 302 (456)
+.+++|++- ..++.+- .|++|+++|.|.-++..|..||+|++|-||||+++|+.|++.+
T Consensus 583 k~aaclaa~-----------------~~k~~e~----sgvini~~gsgslvg~rls~hpdvrkigftgsteig~~im~sc 641 (881)
T KOG2452|consen 583 KTAACLAAQ-----------------VLKFAEL----TGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 641 (881)
T ss_pred HHHHHHHHH-----------------Hhhhhhh----cceEEEecCCcchhccccccCCccceeccccchHHHHHHHHHH
Confidence 999999631 1122211 5889999999999999999999999999999999999999999
Q ss_pred hhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCC
Q 012802 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 382 (456)
Q Consensus 303 a~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~ 382 (456)
+.++.|+|.+|+||++|+|++.|+|+++|++....+.|++.|..|++..|+||.+++.|+|+.++.+.++++++|+|+|.
T Consensus 642 a~snikkvslelgg~sp~iifad~dl~kav~~~~~~vff~kgenciaagr~fi~~sihd~fv~~~vee~~~~~ig~pldr 721 (881)
T KOG2452|consen 642 AISNVKKVSLELGGESPFIIFADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSIHDEFVRRVVEEVRKMKVGNPLDR 721 (881)
T ss_pred hhcchheeeeeccCCCceEEEecCcHHHHHHhhccceeecCCcchhhhcceeehhhhhHHHHHHHHHHHHhhccCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 383 ~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++.||.-.-.+..++.+|++++++.||++.|||.+....|.|++|||+.++.+.|.+..||-||||+.|.+|+
T Consensus 722 ~t~hgpqnh~ahl~kl~ey~~~~v~~ga~~~~gg~~~~r~g~~f~pti~s~i~d~~f~a~eesfgpim~is~f~ 795 (881)
T KOG2452|consen 722 DTDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFA 795 (881)
T ss_pred cccCCchhHHHHHHHHHHHHHHHhccCcEEEECCccCCCCCcccCCeeecccchhhhhhhccccCceEEEEecC
Confidence 99999999999999999999999999999999999988889999999999999999999999999999999985
|
|
| >cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-67 Score=536.88 Aligned_cols=326 Identities=19% Similarity=0.218 Sum_probs=285.7
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhccchHHHHH--HHHHHHHHhH
Q 012802 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTR--LFRYYAGWAD 182 (456)
Q Consensus 105 v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~--~l~~~a~~~~ 182 (456)
+++|++.|++||+ .|+++|+++|.++|+++++.|++++++|+++++.|+|||+.+++. ++..... ..++++.
T Consensus 1 ~~~Ai~~A~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~~-~~~~~~~~~~~~~~~~--- 74 (439)
T cd07081 1 LDDAVAAAKVAQQ--GLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDKV-IKNHFAAEYIYNVYKD--- 74 (439)
T ss_pred CHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHH-HHHHHHHHHHHHHHhc---
Confidence 4689999999999 999999999999999999999999999999999999999988764 4444433 2233332
Q ss_pred hhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHH----HcCC
Q 012802 183 KIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGL 258 (456)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~----~aGl 258 (456)
...+...+.+.+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++. ++|+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~aG~ 154 (439)
T cd07081 75 EKTCGVLTGDENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGA 154 (439)
T ss_pred cccCceecCCCCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHcCC
Confidence 122222232223456889999999999999999999999999999999999999999999999999888875 6799
Q ss_pred CCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHH
Q 012802 259 PPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYA 338 (456)
Q Consensus 259 P~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~ 338 (456)
|+|++|+|++.+.+.++.|+.|++|++|.||||++ +++.+++ ++||+++|+|||+|+||++|||+|.|++.++++
T Consensus 155 P~gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~----v~~~aa~-~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~~ 229 (439)
T cd07081 155 PENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPA----VVKAAYS-SGKPAIGVGAGNTPVVIDETADIKRAVQSIVKS 229 (439)
T ss_pred ChhhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHH----HHHHHHh-cCCCEEEEcCCCCeEEEcCCCCHHHHHHHHHHH
Confidence 99999999987777899999999999999999987 4556666 789999999999999999999999999999999
Q ss_pred HhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCc-
Q 012802 339 LFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE- 417 (456)
Q Consensus 339 ~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~- 417 (456)
+|.|+||.|++.+|+|||+++||+|+++|.+++ ||+++.++++++.++|+++.++|++++.|+.
T Consensus 230 ~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~---------------gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~~~ 294 (439)
T cd07081 230 KTFDNGVICASEQSVIVVDSVYDEVMRLFEGQG---------------AYKLTAEELQQVQPVILKNGDVNRDIVGQDAY 294 (439)
T ss_pred HhcCCCCCCCCCCEEEEcHHHHHHHHHHHHHcC---------------CccCCHHHHHHHHHHHHhcCCcCCcccCCCHH
Confidence 999999999999999999999999999998864 8999999999999999999999998764432
Q ss_pred c-cCCCCceEecE---EEeeCC--CCCcccccccccceeEEEEeC
Q 012802 418 R-LGAKGYYIKPT---VFTGVK--DDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 418 ~-~~~~g~~~~PT---vl~~v~--~~~~i~~~EifGPvl~v~~~~ 456 (456)
. ....|+|++|| ++.+++ ++|.+++||+||||++|++|+
T Consensus 295 ~~~~~~G~~~~pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~ 339 (439)
T cd07081 295 KIAAAAGLKVPQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAA 339 (439)
T ss_pred HHHHHcCCccCCCceEEEEecCCCCCCchhhhCccCceEEEEEcC
Confidence 1 12358999998 999988 999999999999999999986
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. |
| >cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-66 Score=534.47 Aligned_cols=338 Identities=23% Similarity=0.336 Sum_probs=303.4
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhh
Q 012802 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184 (456)
Q Consensus 105 v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~ 184 (456)
+++|++.|++||+ .|+.++..+|.++|+++++.|+++.++|++++++|+|||..++. .|+..+++.++|++..+++.
T Consensus 1 v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~~~-~ev~~~~~~l~~~a~~~~~~ 77 (454)
T cd07129 1 VDAAAAAAAAAFE--SYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQ-GELGRTTGQLRLFADLVREG 77 (454)
T ss_pred ChHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHH-HHHHHHHHHHHHHHHHHHhc
Confidence 4789999999999 99999999999999999999999999999999999999998876 59999999999999877643
Q ss_pred c--CcccCC-------CCCceEEEEEccceEEEEEcCcChhHHH--HHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHH
Q 012802 185 Q--GLTAPA-------DGPYHVQTLHEPIGVAGQIIPWNFPLLM--FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLL 253 (456)
Q Consensus 185 ~--~~~~~~-------~~~~~~~~~~~P~GVv~~i~p~n~P~~~--~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l 253 (456)
. +..... ..+...+++++|+|||++|+|||||+.. .++++++||++||+||+|||+.+|+++.++++++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~ 157 (454)
T cd07129 78 SWLDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAI 157 (454)
T ss_pred CCccccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHH
Confidence 2 211110 1123457889999999999999999988 4589999999999999999999999999998877
Q ss_pred H----HcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhC-CCCcEEEecCCCCceEeccCC--
Q 012802 254 H----EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS-NLKPVTLELGGKSPFIVCEDA-- 326 (456)
Q Consensus 254 ~----~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~-~~~pv~lelgG~~~~iV~~da-- 326 (456)
. ++|+|+|++|+|+|++.+.+..|+.|++|+.|+||||+.+|+.|++.++++ +++|+++|+|||||+||++|+
T Consensus 158 ~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~~iV~~da~~ 237 (454)
T cd07129 158 RAALRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGALA 237 (454)
T ss_pred HHHHHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCcEEEeCCcch
Confidence 4 889999999999997767899999999999999999999999999988863 589999999999999999999
Q ss_pred -CHHHHHHHHHHHHhccCCCcccCCceeEeccc-hHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHH
Q 012802 327 -DVDKAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 404 (456)
Q Consensus 327 -D~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~ 404 (456)
|+|.|++.+++++|.|+||.|++++|||||++ ++|+|+++|.++++++++| |++++.+.++..++|++
T Consensus 238 ~dl~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~~i~d~f~~~l~~~~~~~~~g----------~~~~~~~~~~~~~~i~~ 307 (454)
T cd07129 238 ERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPAQ----------TMLTPGIAEAYRQGVEA 307 (454)
T ss_pred HHHHHHHHHHHHHHhcCCCCeecCCceEEEeCcccHHHHHHHHHHHHhccCCC----------CCcChHHHHHHHHHHHH
Confidence 89999999999999999999999999999999 9999999999999988754 66667777788888899
Q ss_pred HhhC-CCEEEeCCcccCCCCceEecEEEeeCC---CCCcccccccccceeEEEEeC
Q 012802 405 GVDG-GAKLETGGERLGAKGYYIKPTVFTGVK---DDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 405 a~~~-Ga~v~~gg~~~~~~g~~~~PTvl~~v~---~~~~i~~~EifGPvl~v~~~~ 456 (456)
++++ |+++++||... .+|+|++|||+..++ ++|.+++||+||||++|++|+
T Consensus 308 a~~~~ga~~l~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~ 362 (454)
T cd07129 308 LAAAPGVRVLAGGAAA-EGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYD 362 (454)
T ss_pred HHhcCCcEEEeCCCcC-CCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeC
Confidence 9888 99999999754 469999999998666 689999999999999999996
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. |
| >cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-66 Score=532.07 Aligned_cols=334 Identities=26% Similarity=0.298 Sum_probs=302.3
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhc
Q 012802 106 NRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185 (456)
Q Consensus 106 ~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~ 185 (456)
++|++.|++||. .|++++.++|.++|+++++.|++++++|++++++|+|||+ +.. .|+..+++.++|++..++...
T Consensus 2 ~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~~-~ev~~~i~~~~~~~~~~~~~~ 77 (442)
T cd07084 2 ERALLAADISTK--AARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGW-MFA-ENICGDQVQLRARAFVIYSYR 77 (442)
T ss_pred hHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCch-hhh-hhhcchHHHHHHHHHHHHhcc
Confidence 678999999999 9999999999999999999999999999999999999998 544 599999999999998876531
Q ss_pred --Cc---ccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCC-C
Q 012802 186 --GL---TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGL-P 259 (456)
Q Consensus 186 --~~---~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGl-P 259 (456)
+. ..+.......+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+ |
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~~ag~~P 157 (442)
T cd07084 78 IPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLP 157 (442)
T ss_pred ccccccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHHHhCCCC
Confidence 21 11111134568899999999999999999999999999999999999999999999999999999999998 9
Q ss_pred CCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEeccCC-CHHHHHHHHHHH
Q 012802 260 PGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDA-DVDKAAELAHYA 338 (456)
Q Consensus 260 ~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~da-D~d~aa~~i~~~ 338 (456)
+|+++++++++. .+..|+.|++++.|+||||+++|+.|++.++. +|+++|+|||||+||++|| |+|.+++.++++
T Consensus 158 ~g~~~~v~g~~~-~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~---~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~ 233 (442)
T cd07084 158 PEDVTLINGDGK-TMQALLLHPNPKMVLFTGSSRVAEKLALDAKQ---ARIYLELAGFNWKVLGPDAQAVDYVAWQCVQD 233 (442)
T ss_pred ccceEEeeCCcH-HHHHHHcCCCCCEEEEECCHHHHHHHHHhccC---CcEEEeccCcCcEEECCChhhHHHHHHHHHHH
Confidence 999999999766 88999999999999999999999999998764 8999999999999999999 699999999999
Q ss_pred HhccCCCcccCCceeEeccc-hHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhC-CCEEEeCC
Q 012802 339 LFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG-GAKLETGG 416 (456)
Q Consensus 339 ~~~~~GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~-Ga~v~~gg 416 (456)
+|.|+||.|++++|+|||++ ++|+|+++|.++++++++| ++++||++++ ++.++|++++++ |+++++||
T Consensus 234 ~~~~~GQ~C~a~~rl~V~~~~i~~~f~~~l~~~~~~~~~g-----~~~~gpl~~~----~~~~~i~~a~~~gga~~~~gg 304 (442)
T cd07084 234 MTACSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLE-----DLLLGPVQTF----TTLAMIAHMENLLGSVLLFSG 304 (442)
T ss_pred HhcccCCeecCCcEEEEeCCccHHHHHHHHHHHHHhcccC-----ccccChhhhH----HHHHHHHHHHhcCCcEEEeCC
Confidence 99999999999999999999 9999999999999999998 6889999765 455667777777 59999999
Q ss_pred cccC------CCCceEecEEEeeCCCCC---cccccccccceeEEEEeC
Q 012802 417 ERLG------AKGYYIKPTVFTGVKDDM---LIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 417 ~~~~------~~g~~~~PTvl~~v~~~~---~i~~~EifGPvl~v~~~~ 456 (456)
.... .+|+|++|||+.+++++| .+++||+||||++|++|+
T Consensus 305 ~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~ 353 (442)
T cd07084 305 KELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYK 353 (442)
T ss_pred cccccCCCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeC
Confidence 7521 258999999999999997 999999999999999996
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. |
| >cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-64 Score=520.72 Aligned_cols=347 Identities=51% Similarity=0.846 Sum_probs=325.8
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhc
Q 012802 106 NRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185 (456)
Q Consensus 106 ~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~ 185 (456)
+++++.|++|+. .|+.++.++|.++|+++++.|.++.++|+++++.|+||++.++. .|+..+++.+++++...++..
T Consensus 1 ~~av~~a~~a~~--~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~~~~-~ei~~~i~~l~~~~~~~~~~~ 77 (432)
T cd07078 1 DAAVAAARAAFK--AWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEAL-GEVARAADTFRYYAGLARRLH 77 (432)
T ss_pred CHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 368899999999 99999999999999999999999999999999999999988765 599999999999998887765
Q ss_pred Cccc-CCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEE
Q 012802 186 GLTA-PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLN 264 (456)
Q Consensus 186 ~~~~-~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~ 264 (456)
+... ....+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+++
T Consensus 78 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~~~ 157 (432)
T cd07078 78 GEVIPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLN 157 (432)
T ss_pred CccccccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcCcEE
Confidence 5432 233466788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCC
Q 012802 265 IVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 344 (456)
Q Consensus 265 vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~G 344 (456)
++++++.+.+..|..|+++|.|.||||+.+++.|.+.+++ +++|+++|+||++++||++|+|++.|++.+++++|.++|
T Consensus 158 ~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~-~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~~~~G 236 (432)
T cd07078 158 VVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAE-NLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAG 236 (432)
T ss_pred EEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-ccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccC
Confidence 9998766688999999999999999999999999999987 789999999999999999999999999999999999999
Q ss_pred CcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCC-CC
Q 012802 345 QCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA-KG 423 (456)
Q Consensus 345 Q~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~g 423 (456)
|.|+++++||||++++|+|+++|++++.++++|+|+++++++||++++.+++++.++|++++++|+++++||..... +|
T Consensus 237 q~C~a~~~i~v~~~~~~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~~~~g 316 (432)
T cd07078 237 QVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEGGKG 316 (432)
T ss_pred CCccCCceEEEcHHHHHHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999976432 58
Q ss_pred ceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 424 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 424 ~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+|++|||+.+++++++++++|+||||++|++|+
T Consensus 317 ~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~ 349 (432)
T cd07078 317 YFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFK 349 (432)
T ss_pred cEEccEEEecCCCCChhhhCCCcCceEEEEEeC
Confidence 999999999999999999999999999999985
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer |
| >KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-65 Score=488.80 Aligned_cols=375 Identities=30% Similarity=0.516 Sum_probs=346.9
Q ss_pred CCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCC
Q 012802 78 ASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGK 157 (456)
Q Consensus 78 ~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk 157 (456)
.+.++++.+.|.||+.+++++..++.|+++-+..|++|++ +|.+.+...|.++|+.+.+.|-+|.|.+++..++|+||
T Consensus 61 ~~~~~vqCycPatg~yLG~fp~~~~tdide~v~la~kAQk--tW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDtGK 138 (583)
T KOG2454|consen 61 QSDKKVQCYCPATGKYLGYFPALSPTDIDERVTLARKAQK--TWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDTGK 138 (583)
T ss_pred CCCCceEEecCCCcceeeecccCChhhHHHHHHHHHHHHh--hhhhccHHHHHHHHHHHHHHHhhchhheeeeeecccCc
Confidence 4557899999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred ChhhhhccchHHHHHHHHHHHHHhHhhcCcc-cCC---CCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCE
Q 012802 158 PFEQSAQTEVPMTTRLFRYYAGWADKIQGLT-APA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 233 (456)
Q Consensus 158 ~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~-~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~ 233 (456)
++.++..+|+-.+.+.+.|.....++..... .|. ..-...++.++|+||+..|.|||||+...+.++.+||.+||+
T Consensus 139 TmvDAs~GEIlvTlEKI~Wtl~~Ger~L~P~~Rpn~~~~~yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlFsGNa 218 (583)
T KOG2454|consen 139 TMVDASLGEILVTLEKITWTLSEGERWLKPESRPNGRAMLYKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAALFSGNA 218 (583)
T ss_pred hhhhhhHhHHHHHHHHhhhhhhcchhhcCCcCCCchhheeeccceEEEeecceEEEeeecCCchhhhhhHHHHHHhcCCe
Confidence 9999999999999999998887655432221 121 112346789999999999999999999999999999999999
Q ss_pred EEeecCCCChhHHHHHHHH----HHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCc
Q 012802 234 IVLKTAEQTPLSALYVSKL----LHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKP 309 (456)
Q Consensus 234 VVlkps~~~p~~~~~l~~~----l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~p 309 (456)
+|+|-|+.+.++.....++ |+..|-|+++|+++++. ++.+++|.+|+.|+++.|.||+.+++.|++.+++ .++|
T Consensus 219 IVvK~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itcl-pd~a~~ltSh~g~khitFiGSqpvak~i~~~AAk-~LTP 296 (583)
T KOG2454|consen 219 IVVKVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITCL-PDTAEALTSHSGVKHITFIGSQPVAKMIMRNAAK-TLTP 296 (583)
T ss_pred EEEEeecceeeehhhHHHHHHHHHHHcCCCcchhheeecC-cchHhHhhcCCCcceEEEecCcHHHHHHHHhhhh-hcCc
Confidence 9999999999988765555 55569999999999985 4678999999999999999999999999999998 9999
Q ss_pred EEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccC
Q 012802 310 VTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQ 389 (456)
Q Consensus 310 v~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~ 389 (456)
+++|||||+++||++|+|++..+..++++.|..+||.|...+|++||+++||.|+..|-.+++.++.|.|.....|||.|
T Consensus 297 v~lELGGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGiER~iv~k~~Yd~~i~~l~~rv~s~r~G~~~~~~vDMGAm 376 (583)
T KOG2454|consen 297 VTLELGGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGIERFIVHKDIYDAFIGQLTKRVKSVRAGPPLTGRVDMGAM 376 (583)
T ss_pred EEEeecCcccEEEeccccHHHHHHHHHhhhhhhcCCcccceeEEEEecchHHHHHHHHHHHHHHHHcCCCccCccchhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhhCCCEEEeCCccc----CCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 390 IDSEQFEKILKYIRSGVDGGAKLETGGERL----GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 390 i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++.++++.++++|++|+.+||+++.||.+. ...|.|++||+|.+++++|.|+|||.||||++|++++
T Consensus 377 ~s~nrfdhLesLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~im~ak 447 (583)
T KOG2454|consen 377 CSQNRFDHLESLVNDAVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMPIMQAK 447 (583)
T ss_pred hhccchHHHHHHHHHHHhhcchhhhcccccCCCCCCcccccCCeEEEecCchhhhHhhhccccchhhhhcC
Confidence 999999999999999999999999999875 2679999999999999999999999999999999874
|
|
| >cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-64 Score=520.78 Aligned_cols=323 Identities=23% Similarity=0.255 Sum_probs=286.0
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHh
Q 012802 102 AEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA 181 (456)
Q Consensus 102 ~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~ 181 (456)
.+|++++++.|++||+ .|++++.++|.++|+++++.|+++.++|++++++|+|||+.++. ++.++|+++..
T Consensus 3 ~~~v~~av~~A~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~-------~~~~~~~~~~~ 73 (429)
T cd07121 3 FATVDDAVAAAKAAQK--QYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDK-------IAKNHLAAEKT 73 (429)
T ss_pred hhhHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-------HHHHHHHHHhc
Confidence 4789999999999999 99999999999999999999999999999999999999986642 45566665532
Q ss_pred HhhcCcc-c-C---CCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHH--
Q 012802 182 DKIQGLT-A-P---ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH-- 254 (456)
Q Consensus 182 ~~~~~~~-~-~---~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~-- 254 (456)
. +.. . + ...+...+++++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++..+++++.
T Consensus 74 ~---~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~ 150 (429)
T cd07121 74 P---GTEDLTTTAWSGDNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKA 150 (429)
T ss_pred C---cccccccccccCCCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHH
Confidence 1 111 1 1 1112345788999999999999999999999999999999999999999999999999999874
Q ss_pred --HcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEeccCCCHHHHH
Q 012802 255 --EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAA 332 (456)
Q Consensus 255 --~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa 332 (456)
++|+|+|++|++++++.+.+..|++|++||+|+||||+.+|+.|++. .+|+++|+|||+|+||++|||+|.|+
T Consensus 151 ~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~-----~k~~~lelGGk~p~iV~~dADld~Aa 225 (429)
T cd07121 151 IAEAGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS-----GKKAIGAGAGNPPVVVDETADIEKAA 225 (429)
T ss_pred HHHcCCCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC-----CCceEeecCCCceEEEecCCCHHHHH
Confidence 78999999999998777788999999999999999999999999874 48999999999999999999999999
Q ss_pred HHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhC--CC
Q 012802 333 ELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG--GA 410 (456)
Q Consensus 333 ~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~--Ga 410 (456)
+.|++++|.|+||.|++++|||||+++||+|+++|+++ + .++++..+++++.++|+++++. |+
T Consensus 226 ~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~L~~~------~---------~~~i~~~~~~~v~~~i~~a~~~~~ga 290 (429)
T cd07121 226 RDIVQGASFDNNLPCIAEKEVIAVDSVADYLIAAMQRN------G---------AYVLNDEQAEQLLEVVLLTNKGATPN 290 (429)
T ss_pred HHHHhcccccCCCCCCccceEEEeHHHHHHHHHHHHHC------C---------CEEcCHHHHHHHHHhhcccCCCcccc
Confidence 99999999999999999999999999999999999875 1 1478999999999999999864 79
Q ss_pred EEEeCCccc---CCCCceEe---cEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 411 KLETGGERL---GAKGYYIK---PTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 411 ~v~~gg~~~---~~~g~~~~---PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++++||... ...|+|++ |||+.+++++|++++||+||||++|++|+
T Consensus 291 ~~~~gg~~~~~~~~~G~~~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~ 342 (429)
T cd07121 291 KKWVGKDASKILKAAGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVK 342 (429)
T ss_pred ccccCcCHHHHHHHcCCCCCCCCeEEEEecCCCCCccccccccceEEEEEeC
Confidence 999998531 12478888 49999999999999999999999999996
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. |
| >PRK15398 aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-63 Score=516.73 Aligned_cols=328 Identities=22% Similarity=0.226 Sum_probs=286.0
Q ss_pred cCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHH
Q 012802 99 EGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA 178 (456)
Q Consensus 99 ~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a 178 (456)
....+|++++++.|++||. .|+.++.++|.++|+++++.|+++.++|+++++.|+|||+.+++. +.+++++
T Consensus 32 ~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~~ea~~-------~~~~~~~ 102 (465)
T PRK15398 32 MGVFASVDDAVAAAKVAQQ--RYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKI-------AKNVAAA 102 (465)
T ss_pred ccHHHHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHH-------HHHHHHH
Confidence 4668899999999999999 999999999999999999999999999999999999999877542 3445555
Q ss_pred HHhHhh---cCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHH-
Q 012802 179 GWADKI---QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH- 254 (456)
Q Consensus 179 ~~~~~~---~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~- 254 (456)
...... ...... ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.
T Consensus 103 ~~~~~~~~~~~~~~~-~~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~~ 181 (465)
T PRK15398 103 EKTPGVEDLTTEALT-GDNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNE 181 (465)
T ss_pred HHhccccccccCccc-CCCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHHH
Confidence 443211 111111 123456788899999999999999999999999999999999999999999999999999876
Q ss_pred ---HcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEeccCCCHHHH
Q 012802 255 ---EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKA 331 (456)
Q Consensus 255 ---~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~a 331 (456)
++|+|+|++|++++.+.+.+..|++|++||+|+||||+.+|+.|++ ..+|+++|+|||||+||++|||+|.|
T Consensus 182 ~l~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~-----~~k~~~~elGGk~p~IV~~dADld~A 256 (465)
T PRK15398 182 AIVAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK-----SGKKAIGAGAGNPPVVVDETADIEKA 256 (465)
T ss_pred HHHHcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHH-----cCCceeeecCCCceEEEecCCCHHHH
Confidence 6899999999999866678899999999999999999999999988 24899999999999999999999999
Q ss_pred HHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCE
Q 012802 332 AELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK 411 (456)
Q Consensus 332 a~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~ 411 (456)
++.|++++|.|+||.|++++|||||+++||+|+++|+++ + +|+++..+++++.++++++.+++++
T Consensus 257 a~~i~~g~~~n~GQ~C~A~~rvlV~~si~d~f~~~l~~~------~---------~~li~~~~~~~v~~~l~~~~~~~~~ 321 (465)
T PRK15398 257 ARDIVKGASFDNNLPCIAEKEVIVVDSVADELMRLMEKN------G---------AVLLTAEQAEKLQKVVLKNGGTVNK 321 (465)
T ss_pred HHHHHHhcccCCCCcCCCCceEEEeHHHHHHHHHHHHHc------C---------CccCCHHHHHHHHHHHhhcccccch
Confidence 999999999999999999999999999999999999875 1 2789999999999999975545667
Q ss_pred EEeCCcc---cCCCCceE---ecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 412 LETGGER---LGAKGYYI---KPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 412 v~~gg~~---~~~~g~~~---~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++.||.. .+..|+|+ +|||+.+++++|++++||+||||++|++|+
T Consensus 322 ~~~g~~~~~i~~~~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~ 372 (465)
T PRK15398 322 KWVGKDAAKILEAAGINVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVK 372 (465)
T ss_pred hhhCCCHHHHHHhCCCCCCCCCCEEEecCCCCCchhcccccCceEEEEEeC
Confidence 7777642 12246666 489999999999999999999999999996
|
|
| >KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-64 Score=480.62 Aligned_cols=340 Identities=28% Similarity=0.411 Sum_probs=308.1
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhh
Q 012802 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184 (456)
Q Consensus 105 v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~ 184 (456)
++..++.+|.+|.+| +.-+.+.|.+.|+++.+.+++|.++|.+++..|.+|+..++...|+....+.++|+....++.
T Consensus 4 ~~~~v~~~R~~F~sG--rtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L~~w 81 (477)
T KOG2456|consen 4 ISETVRRLRLAFSSG--RTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENLPEW 81 (477)
T ss_pred HHHHHHHHHHHHhcC--CcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhHHh
Confidence 455688999999976 889999999999999999999999999999999999999998899999999999988766655
Q ss_pred cCc-ccC---CCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCC
Q 012802 185 QGL-TAP---ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPP 260 (456)
Q Consensus 185 ~~~-~~~---~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~ 260 (456)
... ..+ .......+++.+|.|||++|+|||||+.+.+.++++||||||+||+|||+.+|.++..+++++.+. |+.
T Consensus 82 v~~~~v~~~~~t~~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Y-ld~ 160 (477)
T KOG2456|consen 82 VKPEPVKKSFLTFLDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQY-LDQ 160 (477)
T ss_pred ccccccCcccccccCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHh-cCc
Confidence 322 211 223567889999999999999999999999999999999999999999999999999999999999 999
Q ss_pred CeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHh
Q 012802 261 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 340 (456)
Q Consensus 261 gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~ 340 (456)
+++.||.|.-++.+. |..| ++|+|+||||+.+|+.|+.++++ ++.||+||||||||++|++|+|++-+++.|+|++|
T Consensus 161 ~~~~VV~Ggv~ETt~-LL~~-rfD~IfyTGsp~VgkIim~aAaK-hLTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk~ 237 (477)
T KOG2456|consen 161 DLIRVVNGGVPETTE-LLKQ-RFDHIFYTGSPRVGKIIMAAAAK-HLTPVTLELGGKSPCYVDKNCDLKIAARRIAWGKW 237 (477)
T ss_pred ceEEEecCCCchHHH-HHHh-hccEEEecCCchHHHHHHHHHHh-cCCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHhh
Confidence 999999995555555 4444 89999999999999999999998 99999999999999999999999999999999999
Q ss_pred ccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccC
Q 012802 341 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 420 (456)
Q Consensus 341 ~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~ 420 (456)
.|+||.|.+++.|+++++++++|+++++..++++ .|+...++.+++.+|+..+++|+...++.- .+|+.||..+
T Consensus 238 ~N~GQtCvapDYiL~~k~~~~kli~alk~~l~eF-YG~n~~eS~d~sRiIn~~hf~Rl~~ll~~~----~kv~~Gg~~d- 311 (477)
T KOG2456|consen 238 MNSGQTCVAPDYILCSKSIQPKLIDALKSTLKEF-YGENPKESKDLSRIINQRHFQRLSALLDET----GKVAIGGESD- 311 (477)
T ss_pred ccCCCeeccCCeEEecHhhhHHHHHHHHHHHHHH-hCCCccccccHHHHhhHHHHHHHHHHhcCC----CceecCCccc-
Confidence 9999999999999999999999999999999987 576667899999999999999999998752 6799999864
Q ss_pred CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 421 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 421 ~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+...|++|||+.+|++++++|+||||||||||+.++
T Consensus 312 ~~d~~I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~ 347 (477)
T KOG2456|consen 312 ESDRYIAPTILLDVPEDSPVMQEEIFGPILPIITVQ 347 (477)
T ss_pred hhhcccCCeEEecCCCCChhhhhhhccCccceeEhh
Confidence 445799999999999999999999999999999873
|
|
| >cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-63 Score=510.59 Aligned_cols=327 Identities=21% Similarity=0.273 Sum_probs=292.0
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhccchHHHHH-HHHHHHHHhHh
Q 012802 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTR-LFRYYAGWADK 183 (456)
Q Consensus 105 v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~-~l~~~a~~~~~ 183 (456)
++++++.|++||. .|+++|.++|.++|+++++.|++++++|++++++|+|||+.+++..|+..+++ .++|++.. +
T Consensus 1 ~~~av~~A~~A~~--~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~--~ 76 (436)
T cd07122 1 VDELVERARKAQR--EFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM--K 76 (436)
T ss_pred ChHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC--c
Confidence 4789999999999 99999999999999999999999999999999999999998887557777787 78888753 2
Q ss_pred hcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHH----HcCCC
Q 012802 184 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLP 259 (456)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~----~aGlP 259 (456)
..+.. ....+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++. ++|+|
T Consensus 77 ~~g~~-~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG~P 155 (436)
T cd07122 77 TVGVI-EEDEEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAGAP 155 (436)
T ss_pred ceeee-ccCCCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcCCC
Confidence 22221 11224457889999999999999999999999999999999999999999999999999888865 78999
Q ss_pred CCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHH
Q 012802 260 PGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYAL 339 (456)
Q Consensus 260 ~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~ 339 (456)
+|++|++++.+.+.+..|.+|++|+.|+||||+.+++ .++. +++|+++|+|||||+||++|||+|.|++.+++++
T Consensus 156 ~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~~----~a~~-~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~~ 230 (436)
T cd07122 156 EGLIQWIEEPSIELTQELMKHPDVDLILATGGPGMVK----AAYS-SGKPAIGVGPGNVPAYIDETADIKRAVKDIILSK 230 (436)
T ss_pred chhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHHH----HHHh-cCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHHh
Confidence 9999999987777899999999999999999999764 3444 7899999999999999999999999999999999
Q ss_pred hccCCCcccCCceeEeccchHHHHHHHHHHHhhhc-------ccCCC-CCCCCccccCCCHHHHHHHHHHHHHHhhCCCE
Q 012802 340 FFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR-------VVGDP-FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK 411 (456)
Q Consensus 340 ~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~-------~~G~p-~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~ 411 (456)
|.|+||.|++++|||||+++||+|+++|+++...+ ++|++ .+.++++||+++..+.+++.+++..++.+|++
T Consensus 231 f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~ga~ 310 (436)
T cd07122 231 TFDNGTICASEQSVIVDDEIYDEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEVPEDTK 310 (436)
T ss_pred hccCCCCCCCCCEEEEechhHHHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCCCCCCe
Confidence 99999999999999999999999999999999887 89998 46788999999999999998888888888888
Q ss_pred EEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 412 LETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 412 v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++.|+ +.+++++|+++ +|.||||++|++|+
T Consensus 311 vl~~~--------------~~~v~~~~~~~-~E~FGPVl~v~~~~ 340 (436)
T cd07122 311 VLVAE--------------ETGVGPEEPLS-REKLSPVLAFYRAE 340 (436)
T ss_pred EEEEe--------------cCCCCCCCcch-hcccCCeEEEEEeC
Confidence 88766 46888999988 56799999999986
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. |
| >TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-62 Score=507.85 Aligned_cols=334 Identities=18% Similarity=0.175 Sum_probs=294.4
Q ss_pred cCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHH
Q 012802 99 EGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA 178 (456)
Q Consensus 99 ~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a 178 (456)
..+.+|++++++.|++||+ .|+.++.++|.++|+++++.|++++++|+++++.|+||+..+.+..+.....+.+.+++
T Consensus 4 ~~~~~~v~~av~~A~~A~~--~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~~~~ 81 (488)
T TIGR02518 4 LYSIQQVRNLIRSAKVAQK--KLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIVYDSI 81 (488)
T ss_pred ccCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHH
Confidence 4678899999999999999 99999999999999999999999999999999999999987755323334555555554
Q ss_pred HHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHH----HHHHH
Q 012802 179 GWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV----SKLLH 254 (456)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l----~~~l~ 254 (456)
...+. .+. ...+.+...+.+++|+|||++|.|||||+....+++++||++||+||+|||+.+|.++..+ .+++.
T Consensus 82 ~~~~~-~G~-~~~~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~l~ 159 (488)
T TIGR02518 82 KDMKT-IGI-LSEDKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAE 159 (488)
T ss_pred hhCcc-cce-ecCCCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHHHH
Confidence 42222 232 2223345678899999999999999999999999999999999999999999999999985 44558
Q ss_pred HcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHH
Q 012802 255 EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAEL 334 (456)
Q Consensus 255 ~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~ 334 (456)
++|+|+|+||++++.+.+.+..|++|++||+|.||||+.+++. +.. .++|+++|+|||+|+||++|||+|.|++.
T Consensus 160 eaGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~~~----a~~-~~~pv~~e~gGn~p~iV~~dADld~Aa~~ 234 (488)
T TIGR02518 160 EAGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMVKA----AYS-SGTPAIGVGPGNGPAYIERTANVKKAVRD 234 (488)
T ss_pred HcCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHHHH----HHH-cCCCEEEEcCCCCeEEEeCCCCHHHHHHH
Confidence 9999999999999877788999999999999999999997644 333 67999999999999999999999999999
Q ss_pred HHHHHhccCCCcccCCceeEeccchHHHHHHHHHHH-------hhhcccCCC-CCCCCccccCCCHHHHHHHHHHHHHHh
Q 012802 335 AHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANAL-------AMKRVVGDP-FKGGIQQGPQIDSEQFEKILKYIRSGV 406 (456)
Q Consensus 335 i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~-------~~~~~~G~p-~~~~~~~Gp~i~~~~~~~~~~~i~~a~ 406 (456)
+++++|+|+||.|++.+|||||+++||+|+++|.++ .+.+++|+| +++++++||+++..+++++.++++.++
T Consensus 235 iv~sk~~~~Gq~C~a~~rllV~~~i~d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~~av 314 (488)
T TIGR02518 235 IIDSKTFDNGTICASEQSIIVEECNKDAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLAGLTV 314 (488)
T ss_pred HHHHHhcCCCCCCCCCCEEEEeHHHHHHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHHhcccc
Confidence 999999999999999999999999999999999998 889999996 678999999999999999999999999
Q ss_pred hCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 407 DGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 407 ~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
.+|+++++||.. .+.++|++ ++|+||||++|++|+
T Consensus 315 ~~gakll~gg~~--------------~v~~~~~~-~~E~fgPVl~v~~~~ 349 (488)
T TIGR02518 315 PEDAKVLIGEQN--------------GVGNKNPY-SREKLTTILAFYTEE 349 (488)
T ss_pred CCCCEEEEeCCC--------------CCCCCCcc-ccCccCceEEEEEeC
Confidence 999999999852 36778886 799999999999986
|
|
| >KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-62 Score=471.89 Aligned_cols=389 Identities=26% Similarity=0.392 Sum_probs=357.9
Q ss_pred CCccCceecCEeeeCCCCCeeeeecCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 012802 63 VDYTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE 141 (456)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~ 141 (456)
....|..|||+.+.+. .+....+|++ +.+++.+..++.++++.|++.|.+|.. .|..+|..+|.+|++|+|++++
T Consensus 57 ~~evP~vIg~~~v~t~--~~q~q~~P~~hq~~lA~~~yA~~k~ie~AIkaAl~a~~--~W~~~PiadR~aI~lkAAdlis 132 (561)
T KOG2455|consen 57 PLEVPLVIGDKEVYTN--DEQYQVCPHNHQHVLAKVYYATKKQIEKAIKAALSAQK--TWELVPIADRLAIFLKAADLIS 132 (561)
T ss_pred ceeccEEECCeeeecC--CcccccCCchhhhhhhheeeccHHHHHHHHHHHHhhcC--ccccCcHHHHHHHHHHHHHHhc
Confidence 3456899999999753 4477889997 568899999999999999999999998 9999999999999999999999
Q ss_pred -hcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCC-CCCceEEEEEccc-eEEEEEcCcChhHH
Q 012802 142 -RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPI-GVAGQIIPWNFPLL 218 (456)
Q Consensus 142 -~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~-GVv~~i~p~n~P~~ 218 (456)
+++-+|....+...||...++..+-+.+.++++|+.+..+.++....... ..+..+...++|+ |.|..|+||||-..
T Consensus 133 tkyr~~l~aatMlgqgKt~~qAeiDa~~eLidf~R~na~ya~eL~~~qpi~~~~~t~ns~~yRpleGFVaAisPFnftAI 212 (561)
T KOG2455|consen 133 TKYRYDLLAATMLGQGKTAIQAEIDAAAELIDFFRFNAKYASELYAQQPISQTKGTWNSMEYRPLEGFVAAISPFNFTAI 212 (561)
T ss_pred chHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHhHHHHHHhhhcCCccccCCCCcceeeccccceeEEecccceeee
Confidence 78888888999999999999876557788999999999988886654432 4455666777887 99999999999999
Q ss_pred HHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHH
Q 012802 219 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 298 (456)
Q Consensus 219 ~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i 298 (456)
..-...+||| +||+|++|||..+.++++++.++|+|||+|+|++|+|+++++..++.+..++++.++.||||+.+-+.+
T Consensus 213 ~gnLa~aPaL-MGN~VLwkPS~ta~lssYii~~il~EAGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~~fk~l 291 (561)
T KOG2455|consen 213 GGNLAGAPAL-MGNVVLWKPSDTAALSSYIIYRILREAGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVPTFKHL 291 (561)
T ss_pred ccccccChhh-hcceeeecccchhHHHHHHHHHHHHHcCCCccceeeccCCCCeecceeccCcccceeeeecccHHHHHH
Confidence 9988899999 799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhC-----CCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhh
Q 012802 299 LQLAAKS-----NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK 373 (456)
Q Consensus 299 ~~~aa~~-----~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~ 373 (456)
.+..+++ .+.+++.|+||||..+|+++||++.++...++++|-++||.|.+.+|+||++++++.+.++|.+.-.+
T Consensus 292 wk~V~~n~~~Y~~fPrlvgEcgGkNFHfVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~wp~i~e~l~~~~~q 371 (561)
T KOG2455|consen 292 WKKVGENVDNYRTFPRLVGECGGKNFHFVHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLWPQIREELVEEHSQ 371 (561)
T ss_pred HHHHHhhhhhhhcchhhhccCCCcceEEeccccchHHHHHHHHHHHHhhcccccchhhhcccchhhcHHHHHHHHHHHhh
Confidence 9888762 46789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCC-CCCCCccccCCCHHHHHHHHHHHHHHhh-CCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeE
Q 012802 374 RVVGDP-FKGGIQQGPQIDSEQFEKILKYIRSGVD-GGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQS 451 (456)
Q Consensus 374 ~~~G~p-~~~~~~~Gp~i~~~~~~~~~~~i~~a~~-~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~ 451 (456)
+++||| .|.++.+||+|+...|+|++++|++++. ....|++||+.++..|+|+.|||+...+|+.++|.||+|||||+
T Consensus 372 ~~igd~~~d~~~f~gavIh~~sF~rl~k~le~ak~~~~leiL~GGk~DdS~G~FV~PTiv~~kdP~~pim~ee~fGPvLs 451 (561)
T KOG2455|consen 372 LKIGDPVIDFSTFIGAVIHDKSFARLKKVLEHAKKDPELEILAGGKCDDSTGYFVEPTIVLSKDPKDPIMTEEIFGPVLS 451 (561)
T ss_pred cccCCccccccchhhhhccHHHHHHHHHHHHhhccCccceeeecCcccCCCCeeecceEEEccCCCcchhhhhccCceeE
Confidence 999998 7889999999999999999999999976 35789999999999999999999999999999999999999999
Q ss_pred EEEeC
Q 012802 452 ILKYK 456 (456)
Q Consensus 452 v~~~~ 456 (456)
|+.|+
T Consensus 452 VyvY~ 456 (561)
T KOG2455|consen 452 VYVYE 456 (561)
T ss_pred EEEec
Confidence 99984
|
|
| >PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-58 Score=509.21 Aligned_cols=336 Identities=20% Similarity=0.273 Sum_probs=287.8
Q ss_pred EEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhccchHHHHHHHH
Q 012802 96 HVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFR 175 (456)
Q Consensus 96 ~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~ 175 (456)
.+...+.+|++++++.|++||+ .|++++.++|.++|+++++.+++++++|+++++.|+|||+.+++..+...+.+.++
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~~~~ 82 (862)
T PRK13805 5 EMAVTNVAELDALVEKAKKAQE--EFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGVVEDKVIKNHFASEYIY 82 (862)
T ss_pred ccCCCCHHHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHH
Confidence 3456889999999999999999 99999999999999999999999999999999999999998866434444444444
Q ss_pred HHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHH-
Q 012802 176 YYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH- 254 (456)
Q Consensus 176 ~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~- 254 (456)
++.. .++..+. ...+.....+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.
T Consensus 83 ~~~~-~~~~~g~-~~~~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~~~ 160 (862)
T PRK13805 83 NSYK-DEKTVGV-IEEDDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIVLD 160 (862)
T ss_pred HHhc-CCCcccc-cCcCCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHHHH
Confidence 3332 1112221 122234457889999999999999999999999999999999999999999999999999999875
Q ss_pred ---HcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEeccCCCHHHH
Q 012802 255 ---EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKA 331 (456)
Q Consensus 255 ---~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~a 331 (456)
++|+|+|+||++++.+.+.+..|++|++||+|+||||+.+++ .++. +++|+++|+|||+|+||++|||++.|
T Consensus 161 ~l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~~----~a~~-~~~pv~~e~gGk~p~iV~~dADl~~A 235 (862)
T PRK13805 161 AAVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMVK----AAYS-SGKPALGVGAGNVPAYIDKTADIKRA 235 (862)
T ss_pred HHHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHHH----HHHh-cCCCeEEECCCCCeEEEeCCCCHHHH
Confidence 689999999999987778899999999999999999998653 4444 78999999999999999999999999
Q ss_pred HHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCE
Q 012802 332 AELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK 411 (456)
Q Consensus 332 a~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~ 411 (456)
++.|++++|.|+||.|++++|||||+++||+|+++|.++ | +|+++.++++++.++|+++++.|+.
T Consensus 236 a~~i~~~k~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~------g---------~~l~~~~~~~~v~~~i~~a~~~~~~ 300 (862)
T PRK13805 236 VNDILLSKTFDNGMICASEQAVIVDDEIYDEVKEEFASH------G---------AYFLNKKELKKLEKFIFGKENGALN 300 (862)
T ss_pred HHHHHHhhhccCCCccCCCceEEEehhhHHHHHHHHHHh------C---------CeeCCHHHHHHHHHHHhhccCCCcC
Confidence 999999999999999999999999999999999998876 1 5899999999999999998766553
Q ss_pred E-EeCCccc---CCCCceEecEE------EeeCCCCCcccccccccceeEEEEeC
Q 012802 412 L-ETGGERL---GAKGYYIKPTV------FTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 412 v-~~gg~~~---~~~g~~~~PTv------l~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
. +.||... ...|+|++||+ +.+++++|++++ |+||||++|++|+
T Consensus 301 ~~~~g~~~~~~~~~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~ 354 (862)
T PRK13805 301 ADIVGQSAYKIAEMAGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAK 354 (862)
T ss_pred ccccCCCHHHHHHHcCCCCCCCCeEEEEecCCCCCCCcchh-cccCcEEEEEEEC
Confidence 2 4466421 13488999997 778999999888 7999999999985
|
|
| >cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-58 Score=469.40 Aligned_cols=298 Identities=19% Similarity=0.217 Sum_probs=257.4
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChh----hhh-------ccchHHHHHHHH
Q 012802 107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE----QSA-------QTEVPMTTRLFR 175 (456)
Q Consensus 107 ~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a~-------~~ev~~~~~~l~ 175 (456)
..++.|++||. .|+.+|.++|.++|+++++.|++++++|+++++.|+||+.. ++. ..|+..+++.++
T Consensus 2 ~~~~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~ 79 (406)
T cd07079 2 ELAKRAKAASR--ALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLR 79 (406)
T ss_pred hHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHH
Confidence 45788999999 99999999999999999999999999999999777766643 222 138889999999
Q ss_pred HHHHHhHhhcCcccCC---CCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHH
Q 012802 176 YYAGWADKIQGLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKL 252 (456)
Q Consensus 176 ~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~ 252 (456)
+++...+. .+...+. +.+...+++++|+|||++|+|| +| ...++++++||++||+||+|||+.+|+++..++++
T Consensus 80 ~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~ 156 (406)
T cd07079 80 QVAALPDP-VGEVLRGWTLPNGLQIEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSNRALVEI 156 (406)
T ss_pred HHHhcCCC-CcccccceeccCccceeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHH
Confidence 99876542 2332221 2234567899999999999996 55 67889999999999999999999999999999999
Q ss_pred HH----HcCCCCCeEEEecCCch-HHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEeccCCC
Q 012802 253 LH----EAGLPPGVLNIVSGYGP-TAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDAD 327 (456)
Q Consensus 253 l~----~aGlP~gvv~vv~g~~~-~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~daD 327 (456)
+. ++|+|+|++|++++.+. +.+..|.+||++|+|+||||+.+|+.|++.+ ++|+++|||||||+||++|||
T Consensus 157 ~~~~l~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a----~~pv~lELGGk~p~IV~~dAD 232 (406)
T cd07079 157 IQEALEEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENA----TIPVIKHGDGNCHVYVDESAD 232 (406)
T ss_pred HHHHHHHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhc----CCCEEeecCCcceEEEeCCCC
Confidence 87 89999999999998544 6788899999999999999999999998876 589999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHhh
Q 012802 328 VDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD 407 (456)
Q Consensus 328 ~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~ 407 (456)
+|.|++.+++++|.|+| .|++++|||||+++||+|+++|.+++++
T Consensus 233 l~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~si~d~f~~~l~~~~~~---------------------------------- 277 (406)
T cd07079 233 LEMAVRIVVNAKTQRPS-VCNALETLLVHRDIAEEFLPKLAEALRE---------------------------------- 277 (406)
T ss_pred HHHHHHHHHHcccCCCc-ccccceeEEEeHHHHHHHHHHHHHHHHH----------------------------------
Confidence 99999999999999999 9999999999999999999999998775
Q ss_pred CCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 408 GGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 408 ~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
.|++++.|+.. ..|++|| ++++|++++||+||||++|++|+
T Consensus 278 ~ga~~~~g~~~----~~~~~pt----v~~d~~i~~eE~FGPVl~v~~~~ 318 (406)
T cd07079 278 AGVELRGDEET----LAILPGA----KPATEEDWGTEYLDLILAVKVVD 318 (406)
T ss_pred CCCEEecCHHH----HHhcccc----cCCCcchhhhhhhCceeEEEEeC
Confidence 25665533321 1488898 78999999999999999999996
|
Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1). |
| >PRK00197 proA gamma-glutamyl phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-57 Score=467.92 Aligned_cols=303 Identities=21% Similarity=0.242 Sum_probs=260.9
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChh----hhhc-------cchHHH
Q 012802 102 AEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE----QSAQ-------TEVPMT 170 (456)
Q Consensus 102 ~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a~~-------~ev~~~ 170 (456)
.+|++++++.|++||. .|+.+|..+|.++|+++++.|++++++|++++++|+||+.. ++.. .|+..+
T Consensus 3 ~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~ 80 (417)
T PRK00197 3 MEYLEELGRRAKAASR--KLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGI 80 (417)
T ss_pred hhHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHH
Confidence 3689999999999999 99999999999999999999999999999999988877642 3321 478889
Q ss_pred HHHHHHHHHHhHhhcCcccCC---CCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHH
Q 012802 171 TRLFRYYAGWADKIQGLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247 (456)
Q Consensus 171 ~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~ 247 (456)
++.++|++.+.+.. +...+. ..+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++.
T Consensus 81 ~~~~~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~ 157 (417)
T PRK00197 81 AEGLRQVAALPDPV-GEVLDGWTLPNGLRIGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHSNR 157 (417)
T ss_pred HHHHHHHhhcCCCc-cccccceecCCCceEEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHHHH
Confidence 99999999876643 333321 22335788999999999999986 4 678899999999999999999999999999
Q ss_pred HHHHHH----HHcCCCCCeEEEecCCc-hHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEe
Q 012802 248 YVSKLL----HEAGLPPGVLNIVSGYG-PTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 322 (456)
Q Consensus 248 ~l~~~l----~~aGlP~gvv~vv~g~~-~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV 322 (456)
.+++++ .++|+|+|++|+|++.+ .+.+..|.+|++||+|+||||+.+|+.|++.+ ++|+++|||||||+||
T Consensus 158 ~l~~l~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a----~~~~~lELGGk~p~IV 233 (417)
T PRK00197 158 ALVAVIQEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENA----TVPVIEHGDGICHIYV 233 (417)
T ss_pred HHHHHHHHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhc----CCCEEeecCCcceEEE
Confidence 998885 68899999999999644 55788899999999999999999999998864 5899999999999999
Q ss_pred ccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHH
Q 012802 323 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 402 (456)
Q Consensus 323 ~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i 402 (456)
++|||+|.|++.+++++|.|+| .|++++|+|||+++||+|+++|.+++++++++
T Consensus 234 ~~dAdl~~Aa~~iv~~~~~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~------------------------- 287 (417)
T PRK00197 234 DESADLDKALKIVLNAKTQRPS-VCNALETLLVHEAIAEEFLPKLAEALAEAGVE------------------------- 287 (417)
T ss_pred eCCCCHHHHHHHHHHhccCCCc-ccccceEEEEEHHHhHHHHHHHHHHHHHCCCe-------------------------
Confidence 9999999999999999999999 99999999999999999999999999987532
Q ss_pred HHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 403 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 403 ~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++ ||... .+ |+ |||+ +++|.+++||+||||++|++|+
T Consensus 288 ---------~~-~~~~~--~~-~~-PTi~---~~~~~i~~eE~FGPVl~v~~~~ 324 (417)
T PRK00197 288 ---------LR-GDEAA--LA-LL-PDVV---PATEEDWDTEYLDLILAVKVVD 324 (417)
T ss_pred ---------Ee-cCHHH--HH-hh-cccc---cCCcchhhhhhhCceEEEEEeC
Confidence 11 11110 12 33 9998 4689999999999999999996
|
|
| >KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-57 Score=422.71 Aligned_cols=379 Identities=30% Similarity=0.522 Sum_probs=354.5
Q ss_pred ecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHH
Q 012802 70 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAA 149 (456)
Q Consensus 70 I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~ 149 (456)
.+|+|- .+|..+++++|++.++|+.+..++.+|-+.+++.|++|++ .|...+..+|.++.+.+.|.|....+.|-+
T Consensus 24 y~gkw~--a~g~vv~t~~pann~pia~v~~asv~dye~~~k~a~ea~k--iw~~vpapkrgeivrqigdalr~klq~lg~ 99 (507)
T KOG2453|consen 24 YHGKWA--ASGQVVQTFAPANNSPIANVQNASVQDYEIAIKEAKEAYK--IWCEVPAPKRGEIVRQIGDALRTKLQNLGK 99 (507)
T ss_pred eeeeec--cCCceeEeecCCCCChhHHHhhccHHHHHHHHHHHHHHHH--HHhcCCCCccchHHHHHHHHHHHHHHHHhh
Confidence 456996 5778899999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCC-CceEEEEEccceEEEEEcCcChhHHHHHHHHhhhh
Q 012802 150 LETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADG-PYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 228 (456)
Q Consensus 150 ~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~-~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL 228 (456)
++++|+||-..+.. +|+..-++.+.|..++.+.+.+..+|... ++-....|.|+|+|++|+.+|||....-|.-+-||
T Consensus 100 lvslemgkilaegv-gevqeyvdicdyavglsr~l~g~i~pserpghalleqwnplg~vgvitafnfpcavygwnnaiaM 178 (507)
T KOG2453|consen 100 LVSLEMGKILAEGV-GEVQEYVDICDYAVGLSRSLEGKIFPSERPGHALLEQWNPLGVVGVITAFNFPCAVYGWNNAIAM 178 (507)
T ss_pred hhhhhhhhHhhhcc-hhHHHHHHHHHHhhhhhhhhCCcccCCCCCchhHHHhcCCcceEEEEEeccCCceeeccCchhhh
Confidence 99999999998864 69999999999999999999998888665 34445689999999999999999999999999999
Q ss_pred hcCCEEEeecCCCChhHHHHHHH----HHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhh
Q 012802 229 ACGNTIVLKTAEQTPLSALYVSK----LLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304 (456)
Q Consensus 229 aaGN~VVlkps~~~p~~~~~l~~----~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~ 304 (456)
.+||+|++||++.+|+++...-+ .|.+--+|++.....+| +.+.+.++..+.++..+.||||+++++.+.+....
T Consensus 179 v~gncVvWKpApttpLtTiAvtklIaevL~qnnl~~aicsltcG-~aDigrAaakdgRvnlvsftGssQvgKsvgq~vqa 257 (507)
T KOG2453|consen 179 VCGNCVVWKPAPTTPLTTIAVTKLIAEVLEQNNLPGAICSLTCG-GADIGRAAAKDGRVNLVSFTGSSQVGKSVGQQVQA 257 (507)
T ss_pred hhcceeEecCCCCcceeHHHHHHHHHHHHhccCCCcceeeeccc-chhhhhhccccCceeecccccchhhhhHHHHHHHH
Confidence 99999999999999998776554 45566899999999998 67899999999999999999999999999988777
Q ss_pred CCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCC
Q 012802 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384 (456)
Q Consensus 305 ~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 384 (456)
++-+..+||||+|+.||.+|||+..++...++++...+||.|+..+|++||+++||+.+++|+...+++++|+|+|+++
T Consensus 258 -rfgk~llelggnnaiiv~edadl~lvvps~lfaavgtagqrctt~rrl~~hesvyd~vlerlkkayaq~~ignpld~nt 336 (507)
T KOG2453|consen 258 -RFGKLLLELGGNNAIIVNEDADLNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVYDQVLERLKKAYAQFEIGNPLDSNT 336 (507)
T ss_pred -HhhhHHHhhcCCceEEEeccccceeeehHHHHHHhcccccchhhhhHHHhhHHHHHHHHHHHHHHHHheecCCcCCCCc
Confidence 5678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 385 ~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
-+||+.+++...+.+..++.++++|+++++||+..+..|+|++|||++ ...|.++..+|.|.||++|++|+
T Consensus 337 l~gplht~qav~~f~~~veeak~~ggki~yggkv~er~gnfveptivt-l~hda~vv~~etfapilyvlkf~ 407 (507)
T KOG2453|consen 337 LIGPLHTQQAVGKFKASVEEAKASGGKIEYGGKVLERDGNFVEPTIVT-LKHDAPVVLRETFAPILYVLKFS 407 (507)
T ss_pred eeccccCHHHHHHHHHHHHHHHhcCCeEEECCEeeccCCCcccceEEE-ecCCcchhhhhhccceeeEEecc
Confidence 999999999999999999999999999999999888889999999997 89999999999999999999985
|
|
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-55 Score=477.23 Aligned_cols=298 Identities=21% Similarity=0.230 Sum_probs=263.1
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHH------HHhcC--CChhhhh---ccchHHHH
Q 012802 103 EDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALE------TWDNG--KPFEQSA---QTEVPMTT 171 (456)
Q Consensus 103 ~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~------~~e~G--k~~~~a~---~~ev~~~~ 171 (456)
+++++++++|++||. .|+++|..+|.++|+++++.|+++.++|++++ ++|+| ||+.++. ..|+..++
T Consensus 294 ~~~~~~~~aA~~A~~--~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~ 371 (718)
T PLN02418 294 VGAREMAVAARESSR--KLQALSSEERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLA 371 (718)
T ss_pred HHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHH
Confidence 359999999999999 89999999999999999999999999999996 77999 8877753 35999999
Q ss_pred HHHHHHHHHhHhhcCcccC---CCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHH
Q 012802 172 RLFRYYAGWADKIQGLTAP---ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALY 248 (456)
Q Consensus 172 ~~l~~~a~~~~~~~~~~~~---~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~ 248 (456)
+.++||++. .+..+...+ ...+...++.++|+|||++|+||| |+.+. ++++|||++||+||+|||+.+|+++..
T Consensus 372 ~~~~~~a~~-~~~~g~~~~~~~~~~~~~~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s~~~ 448 (718)
T PLN02418 372 ASIRQLADM-EDPIGRVLKRTEVADGLVLEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARSNAI 448 (718)
T ss_pred HHHHHHhcC-ccccCccccccccCCCceEEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHHHHH
Confidence 999999987 334444333 223444688999999999999999 99999 999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCe----EEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEecc
Q 012802 249 VSKLLHEAGLPPGV----LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE 324 (456)
Q Consensus 249 l~~~l~~aGlP~gv----v~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~ 324 (456)
+++++.++ +|+|+ +|+|++ +.+.+..|..|++|++|+||||+.. +++.++. ++||+++|+|||+|+||++
T Consensus 449 l~~l~~eA-lP~gv~~~v~nvv~g-~~~~g~~L~~~~~v~~V~FTGSt~~---i~~~aa~-~~k~v~lELGGk~p~iV~~ 522 (718)
T PLN02418 449 LHKVITDA-IPKTVGGKLIGLVTS-RDEIPDLLKLDDVIDLVIPRGSNKL---VSQIKAS-TKIPVLGHADGICHVYVDK 522 (718)
T ss_pred HHHHHHHH-ccccCCcceEEEeCC-cHHHHHHHhhCCCCCEEEEeCCHHH---HHHHHHh-cCCCEEEeCCCcceEEEeC
Confidence 99999999 99995 999997 5678999999999999999999964 4444554 7899999999999999999
Q ss_pred CCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHH
Q 012802 325 DADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 404 (456)
Q Consensus 325 daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~ 404 (456)
|||+|.|++.+++++|.| ||.|++.+|+|||+++||+ | .+.++|++
T Consensus 523 DADld~A~~~i~~~~~~n-GQ~C~a~~RllVh~~i~d~------------------------G---------~~~~~i~~ 568 (718)
T PLN02418 523 SADMDMAKRIVVDAKTDY-PAACNAMETLLVHKDLVQN------------------------G---------GLNDLLVA 568 (718)
T ss_pred CCCHHHHHHHHHHHhCCC-CCccccCcEEEEecccccc------------------------c---------cHHHHHHH
Confidence 999999999999999999 9999999999999999997 2 35899999
Q ss_pred HhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 405 GVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 405 a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++++||++ +||.+.. | +|. + ++|.+++||+||||++|.+|+
T Consensus 569 a~~~Ga~l-~Gg~~~~--g------~l~-~-~~~~i~~eE~FgPv~~i~~~~ 609 (718)
T PLN02418 569 LRSAGVTL-YGGPRAS--K------LLN-I-PEAQSFHHEYSSLACTVEIVD 609 (718)
T ss_pred HHHCCCEE-ECCcccc--C------eeC-C-CCchhhhCCcCCeeEEEEEEC
Confidence 99999999 6885431 3 243 4 889999999999999999986
|
|
| >TIGR00407 proA gamma-glutamyl phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-55 Score=447.04 Aligned_cols=296 Identities=19% Similarity=0.174 Sum_probs=252.0
Q ss_pred HHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHH------HHHhcCCCh------hhhhccchHHHHHHHHHHHH
Q 012802 112 ARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAAL------ETWDNGKPF------EQSAQTEVPMTTRLFRYYAG 179 (456)
Q Consensus 112 A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~------~~~e~Gk~~------~~a~~~ev~~~~~~l~~~a~ 179 (456)
|++||. .|++++..+|.++|+++++.|++++++|+++ ++.|+|||. .++. .|+..+++.++|+++
T Consensus 1 a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~-~ev~~~~~~~~~~a~ 77 (398)
T TIGR00407 1 AKQAAN--ILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTE-GRLKGIADGVKDVIE 77 (398)
T ss_pred ChhHHH--HHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCH-HHHHHHHHHHHHHhc
Confidence 467888 8999999999999999999999999999999 899999993 2233 489999999999998
Q ss_pred HhHhhcCcccCC---CCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHH----
Q 012802 180 WADKIQGLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKL---- 252 (456)
Q Consensus 180 ~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~---- 252 (456)
.++.. +...+. ..+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..++++
T Consensus 78 ~a~~~-g~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~a 154 (398)
T TIGR00407 78 LADPV-GKVIDGRELDSGLTLERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDA 154 (398)
T ss_pred CCCCC-cccccceecCCCceEEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHH
Confidence 88654 433332 23557788999999999999997 6 67889999999999999999999999999999999
Q ss_pred HHHcCCCCCeEEEecCCc-hHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEeccCCCHHHH
Q 012802 253 LHEAGLPPGVLNIVSGYG-PTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKA 331 (456)
Q Consensus 253 l~~aGlP~gvv~vv~g~~-~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~a 331 (456)
|.++|+|+|++|+|++.+ .+.+..|.+|++||+|+||||+.+|+.+++. ..+|+++|+|||+|+||++|||+|.|
T Consensus 155 l~eaGlP~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~----~~~~~~~e~gGk~p~iV~~dADl~~A 230 (398)
T TIGR00407 155 LAQTGLPVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQT----STIPVLGHGDGICHIYLDESADLIKA 230 (398)
T ss_pred HHHcCCChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHh----CCCCEEEecCCcceEEEeCCCCHHHH
Confidence 569999999999999744 4578999999999999999999999988764 45799999999999999999999999
Q ss_pred HHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCE
Q 012802 332 AELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK 411 (456)
Q Consensus 332 a~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~ 411 (456)
++.+++++|.+ ||.|++++|+|||+++||+|+++|.+++.++.+ .+++ .+.+.+++..
T Consensus 231 a~~iv~~~~~~-GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~--------~~~~------~~~i~~~v~~------- 288 (398)
T TIGR00407 231 IKVIVNAKTQR-PSTCNAIETLLVNKAIAREFLPVLENQLLEKGV--------TIHA------DAYALKLLEL------- 288 (398)
T ss_pred HHHHHhhhcCC-CCcccccceEEEeHHHHHHHHHHHHHHHHhcCC--------EEec------CHHHHHHHhc-------
Confidence 99999999965 999999999999999999999999999987643 2222 1334444321
Q ss_pred EEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 412 LETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 412 v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
|| |||+ + .+|.+++||+||||++|++|+
T Consensus 289 ---g~-----------~tv~-~--~~~~i~~eE~FgPvl~v~~~~ 316 (398)
T TIGR00407 289 ---GP-----------ATEA-I--VCKTDFDKEFLSLDLSVKIVE 316 (398)
T ss_pred ---cC-----------cccc-c--cccccccchhhCceeEEEEEC
Confidence 11 3554 2 337899999999999999986
|
The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif. |
| >cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-55 Score=447.23 Aligned_cols=292 Identities=20% Similarity=0.202 Sum_probs=262.7
Q ss_pred HHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhh----------ccchHHHHHHHHHHHHH
Q 012802 111 AARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA----------QTEVPMTTRLFRYYAGW 180 (456)
Q Consensus 111 ~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~----------~~ev~~~~~~l~~~a~~ 180 (456)
.|++||+ .|++++..+|.++|+++++.|++++++|+++++.|+|||+.+.. ..|+..+++.++|++..
T Consensus 2 ~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~a~~ 79 (397)
T cd07077 2 SAKNAQR--TLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGITAS 79 (397)
T ss_pred hHHHHHH--HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHHHHh
Confidence 5788998 99999999999999999999999999999999999999965432 13788999999999876
Q ss_pred hHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHc---C
Q 012802 181 ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA---G 257 (456)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~a---G 257 (456)
..+..+...+. ....+++++|+|||++|.|||||+. .++++++||++||+||+|||+.+|+++.++++++.++ |
T Consensus 80 ~~~~~~~~~~~--~~~~~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~~~g 156 (397)
T cd07077 80 VGHIQDVLLPD--NGETYVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADAAH 156 (397)
T ss_pred cCcccceEecC--CCceEEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHhhcC
Confidence 55544433222 3357899999999999999999999 9999999999999999999999999999999999987 9
Q ss_pred CCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHH
Q 012802 258 LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHY 337 (456)
Q Consensus 258 lP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~ 337 (456)
+|+++++++++.+.+.+..|+.|+++|+|+||||+++++.+.+.+. .+|+++|+||++++||++|||++.|++.+++
T Consensus 157 ~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~---~~~~~~~~gg~~~~iv~~dad~~~a~~~~~~ 233 (397)
T cd07077 157 GPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSP---HIPVIGFGAGNSPVVVDETADEERASGSVHD 233 (397)
T ss_pred CCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCC---CCceEEecCCcceEEEcCCCCHHHHHHHHHH
Confidence 9999999999877778999999999999999999999999988763 5899999999999999999999999999999
Q ss_pred HHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCc
Q 012802 338 ALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE 417 (456)
Q Consensus 338 ~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~ 417 (456)
++|.| ||.|+++++||||+++||+|+++|.+++.. +|++++.||.
T Consensus 234 ~~~~~-GQ~C~a~~~v~V~~~i~d~~~~~l~~~~~~----------------------------------~G~~~~~g~~ 278 (397)
T cd07077 234 SKFFD-QNACASEQNLYVVDDVLDPLYEEFKLKLVV----------------------------------EGLKVPQETK 278 (397)
T ss_pred hhccC-CccCCCCeEEEEehhhhHHHHHHHHHHHHh----------------------------------cCcCcCCCce
Confidence 99999 999999999999999999999999998875 5777877763
Q ss_pred ccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 418 RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 418 ~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++|+.|| ++|.+++||+||||++|++|+
T Consensus 279 -----~~~~~pt------~~~~~~~~E~FgPvl~v~~~~ 306 (397)
T cd07077 279 -----PLSKETT------PSFDDEALESMTPLECQFRVL 306 (397)
T ss_pred -----eeEEecc------CCCChhhhhhhCceeEEEEEc
Confidence 5788887 789999999999999999985
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. |
| >cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-51 Score=419.16 Aligned_cols=282 Identities=56% Similarity=0.885 Sum_probs=264.8
Q ss_pred HHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCccc-
Q 012802 111 AARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA- 189 (456)
Q Consensus 111 ~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~- 189 (456)
.|++++. .|+.++.++|.++|+++++.|.++.++|++++++|+|||+.++.. |+..+++.++|++.+.++..+...
T Consensus 2 ~a~~a~~--~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~~~~-ev~~~~~~l~~~~~~~~~~~~~~~~ 78 (367)
T cd06534 2 AARAAFK--AWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEALG-EVARAIDTFRYAAGLADKLGGPELP 78 (367)
T ss_pred hHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccc
Confidence 5788888 999999999999999999999999999999999999999988764 999999999999998887765322
Q ss_pred CCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCC
Q 012802 190 PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 269 (456)
Q Consensus 190 ~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~ 269 (456)
....+...+.+++|+||+++|.|||+|+...++++++||++||+||+|||+.+|.++..++++|.++|+|+|++++++++
T Consensus 79 ~~~~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag~p~~~v~~~~~~ 158 (367)
T cd06534 79 SPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGG 158 (367)
T ss_pred ccCCCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcCCCcCeEEEEEcC
Confidence 23346678899999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred chHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccC
Q 012802 270 GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCA 349 (456)
Q Consensus 270 ~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a 349 (456)
+++.+..|..|+++|.|.||||+++++.|.+.+++ +++|+++|+||+|++||++|+|++.|++.+++++|.++||.|++
T Consensus 159 ~~~~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~-~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~~~~gq~C~s 237 (367)
T cd06534 159 GDEVGAALLSHPRVDKISFTGSTAVGKAIMKAAAE-NLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTA 237 (367)
T ss_pred chhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhc-CCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCC
Confidence 77788999999999999999999999999999987 78999999999999999999999999999999999999999999
Q ss_pred CceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecE
Q 012802 350 GSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPT 429 (456)
Q Consensus 350 ~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PT 429 (456)
+++||||++++|+|+++|+ |
T Consensus 238 ~~~v~v~~~~~~~f~~~l~------------------------------------------------------------t 257 (367)
T cd06534 238 ASRLLVHESIYDEFVEKLV------------------------------------------------------------T 257 (367)
T ss_pred CcEEEEcHHHHHHHHHhhc------------------------------------------------------------e
Confidence 9999999999999999998 7
Q ss_pred EEeeCCCCCcccccccccceeEEEEeC
Q 012802 430 VFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 430 vl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
|+.+++++++++++|+||||++|++|+
T Consensus 258 l~~~~~~~~~~~~~E~fgPv~~v~~~~ 284 (367)
T cd06534 258 VLVDVDPDMPIAQEEIFGPVLPVIRFK 284 (367)
T ss_pred eeeCCCCCCccccCCccCceEEEEecC
Confidence 888889999999999999999999985
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri |
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-51 Score=446.11 Aligned_cols=295 Identities=19% Similarity=0.196 Sum_probs=250.4
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhcc---------------chH
Q 012802 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT---------------EVP 168 (456)
Q Consensus 104 ~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~---------------ev~ 168 (456)
+++..+++|++||. .|+.++.++|.++|+++++.|+++.++|+ .++||++.+++.. |+.
T Consensus 287 ~~~~~~~~A~~A~~--~w~~~~~~~R~~~L~~la~~l~~~~eei~----~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~ 360 (715)
T TIGR01092 287 GERDMAVAARESSR--MLQALSSEQRKEILHDIADALEDNEDEIL----AENKKDVAAAQGAGYAASLVARLSMSPSKIS 360 (715)
T ss_pred HHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHHHHHHH----HHHhhhHHHHHhcCcchhHHHHHhCCHHHHH
Confidence 37888999999999 99999999999999999999999999997 4888888766531 367
Q ss_pred HHHHHHHHHHHHhHhhcCcccC---CCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhH
Q 012802 169 MTTRLFRYYAGWADKIQGLTAP---ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245 (456)
Q Consensus 169 ~~~~~l~~~a~~~~~~~~~~~~---~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~ 245 (456)
.+++.++++++. .+..+...+ ...+...+.+++|+|||++|+||| |+.+ ++++++||++||+||+|||+.+|++
T Consensus 361 ~~~~~l~~~a~~-~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t 437 (715)
T TIGR01092 361 SLAISLRQLAAM-EDPIGRVLKRTRIADNLILEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARS 437 (715)
T ss_pred HHHHHHHHHhcC-CCcccccccccccCCCceeEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHH
Confidence 788888888873 333333222 112344578999999999999999 9999 6899999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCC----eEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceE
Q 012802 246 ALYVSKLLHEAGLPPG----VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321 (456)
Q Consensus 246 ~~~l~~~l~~aGlP~g----vv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~i 321 (456)
+..+++++.++ +|+| ++++|++ +++.+..|..|++||+|+||||+.+|+.|++.++ +|+++|+|||||+|
T Consensus 438 ~~~l~~l~~~a-lp~g~~~~~~~~v~~-~~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~----~pv~lElgGk~p~i 511 (715)
T TIGR01092 438 NAILHKVITEA-IPIHVGKKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTK----IPVLGHADGICHVY 511 (715)
T ss_pred HHHHHHHHHHH-cCCCCCCcEEEEeCC-hHHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCC----CCEEEEcCCcceEE
Confidence 99999999999 9987 6899985 5677889999999999999999999999998863 89999999999999
Q ss_pred eccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHH
Q 012802 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 401 (456)
Q Consensus 322 V~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~ 401 (456)
|++|||++.|++.++.++|.+ ||.|++++|||||+++||+ | .+.++
T Consensus 512 V~~dADl~~A~~~i~~~~~~~-GQ~C~a~~rvlV~~~i~d~-------------------------~--------~~~~~ 557 (715)
T TIGR01092 512 VDKSASVDMAKRIVRDAKCDY-PAACNAMETLLVHKDLLRN-------------------------G--------LLDDL 557 (715)
T ss_pred ECCCCCHHHHHHHHHHHhCCC-CCccccCcEEEEehhhccc-------------------------h--------hHHHH
Confidence 999999999987777777665 9999999999999999985 1 26688
Q ss_pred HHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 402 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 402 i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++++++|++++ ||.+.. .|+. .++++|++++||+||||++|++|+
T Consensus 558 v~~~~~~Ga~l~-Gg~~~~---~~~~-----~~~~~~~i~~eE~FGPvl~v~~~~ 603 (715)
T TIGR01092 558 IDMLRTEGVTIH-GGPRFA---AYLT-----FNISETKSFRTEYSSLACTVEIVD 603 (715)
T ss_pred HHHHHHCCCEEE-CCcchh---heec-----cCCCCchhhhccccCceEEEEEEC
Confidence 888888999985 775421 2442 236789999999999999999996
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. |
| >cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=281.92 Aligned_cols=266 Identities=17% Similarity=0.177 Sum_probs=194.2
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH----hcHHHHHHHHHHhcCCChhhhhccchHHHHHHHH--H
Q 012802 103 EDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE----RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFR--Y 176 (456)
Q Consensus 103 ~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~----~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~--~ 176 (456)
.+++...+..+...+ ....++.++..+++.++++.+. ..+.+..+.+..-+|.+...... .+......++ .
T Consensus 5 ~~~~~~~~~l~~~~~--~~~~~~~~~iv~~l~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~-a~~~l~~~~~r~~ 81 (422)
T cd07080 5 PDLDALIEELRLNRR--ALAALPVEEIVDFLDRAGKRLLDPDYPLRQQAERLLPTVTGYSEEMLRE-GLKRLMALFRREN 81 (422)
T ss_pred HHHHHHHHHHHhhHH--hHhcCCHHHHHHHHHHHHHHhcCCCchHHHHHHHhhhhccCCCHHHHHH-HHHHHHHHcCHHH
Confidence 344444444433332 3445666666666666666664 23344455555556655333221 2222222222 1
Q ss_pred HHHHhHhhcCc--ccC--CCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHH
Q 012802 177 YAGWADKIQGL--TAP--ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKL 252 (456)
Q Consensus 177 ~a~~~~~~~~~--~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~ 252 (456)
......+-.+. .+. ...+...++.++|+|++++|+|||||+ ..++.+++||++||++|+|||+.+|.++..+.++
T Consensus 82 l~~~l~~el~~~~~Ld~w~~~~~~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~~ 160 (422)
T cd07080 82 LERILERELGSPGILDEWVPPGRGGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTATALLRS 160 (422)
T ss_pred HHHHHHHhcCCcccccCCccCCCCCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHHHHHHHH
Confidence 11111111111 000 111445678999999999999999999 7899999999999999999999999999999999
Q ss_pred HHHcCCCC----CeEEEe--cCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCc-eEeccC
Q 012802 253 LHEAGLPP----GVLNIV--SGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSP-FIVCED 325 (456)
Q Consensus 253 l~~aGlP~----gvv~vv--~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~-~iV~~d 325 (456)
|.++ +|+ +.++++ +|.+.+++..|..++ |+|+||||+++++.|++.++. + +.++|+|||++ +|+.++
T Consensus 161 l~~~-~p~~~~~~~~~vv~~~g~~~~~~~~l~~~~--D~i~~~Gs~~~~~~i~~~a~~-~--~~~Le~Ggk~s~~vi~~~ 234 (422)
T cd07080 161 LADV-DPNHPLTDSISVVYWPGGDAELEERILASA--DAVVAWGGEEAVKAIRSLLPP-G--CRLIDFGPKYSFAVIDRE 234 (422)
T ss_pred HHhc-CCCCcccceEEEEEecCCchHHHHHHHHhC--CEEEEeCCHHHHHHHHHhCCC-C--CeeeecCCceeEEEecHH
Confidence 9999 787 888998 465566888899886 999999999999999998875 4 56999999955 555556
Q ss_pred C----CHHHHHHHHHHHHhccCCCcccCCceeEeccch---HHHHHHHHHHHhhhcccCC
Q 012802 326 A----DVDKAAELAHYALFFNQGQCCCAGSRTFVHESV---YDQFVEKANALAMKRVVGD 378 (456)
Q Consensus 326 a----D~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i---~d~f~~~l~~~~~~~~~G~ 378 (456)
+ |++.+++.+++++|.|+||.|.|+++||||+++ +++|.++|.++++++.-..
T Consensus 235 a~~~~dl~~aa~~~a~~~~~~~gQ~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~ 294 (422)
T cd07080 235 ALESEKLAEVADALAEDICRYDQQACSSPQVVFVEKDDDEELREFAEALAAALERLPRRY 294 (422)
T ss_pred hhccccHHHHHHHHHHHHHHHhhhhccCCeEEEEECCCCchHHHHHHHHHHHHHHHHHhC
Confidence 8 999999999999999999999999999999999 9999999999999875433
|
Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN. |
| >COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.92 E-value=5e-24 Score=207.80 Aligned_cols=261 Identities=20% Similarity=0.240 Sum_probs=217.3
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhc------CCChhhhhcc-------chHH
Q 012802 103 EDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDN------GKPFEQSAQT-------EVPM 169 (456)
Q Consensus 103 ~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~------Gk~~~~a~~~-------ev~~ 169 (456)
.++.+..+.|++|.. ....++..+|.+.|.++++.|+++.++|.++...|. |.+ ++..+ .+..
T Consensus 3 ~~~~~~~~~Ak~A~~--~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~--~~m~DRL~L~~~Ri~~ 78 (417)
T COG0014 3 SELEELGKRAKAASR--KLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLS--EAMLDRLALTPSRIEA 78 (417)
T ss_pred hHHHHHHHHHHHHHH--HHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCc--HHHHHHHcCCHHHHHH
Confidence 356777888998888 889999999999999999999999999999887764 332 22111 2333
Q ss_pred HHHHHHHHHHHhHhhcCcc--cCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHH
Q 012802 170 TTRLFRYYAGWADKIQGLT--APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247 (456)
Q Consensus 170 ~~~~l~~~a~~~~~~~~~~--~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~ 247 (456)
.++.++..+.+.|++.... ...+.+.+.+..+.|+||+++| |......+....+.||++||+||||.+..+..++.
T Consensus 79 ma~gl~~Va~L~DPvGev~~~~~~~nGL~i~~~rvPLGVigvI--YEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~ 156 (417)
T COG0014 79 MADGLRQVAALPDPVGEVIDGWTLPNGLQIYRVRVPLGVIGVI--YESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNA 156 (417)
T ss_pred HHHHHHHHhcCCCchHhhhccccCCCCCEEEEEEccceEEEEE--EecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHH
Confidence 4444555555444432211 1235688899999999999999 88888889999999999999999999999999999
Q ss_pred HHHHHHH----HcCCCCCeEEEecCC-chHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEe
Q 012802 248 YVSKLLH----EAGLPPGVLNIVSGY-GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 322 (456)
Q Consensus 248 ~l~~~l~----~aGlP~gvv~vv~g~-~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV 322 (456)
.+.++++ ++|+|++.||+++.. ..++.+.|..+..||.|...||...-+.|.+.+ -.||+-.+-|+|.+||
T Consensus 157 ai~~~i~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a----~vPVi~~~~G~CHiyv 232 (417)
T COG0014 157 AIVEVIQEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENA----TVPVIEHGVGNCHIYV 232 (417)
T ss_pred HHHHHHHHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCC----cCCEEecCcceEEEEe
Confidence 8888755 669999999999974 456677777888999999999999988887765 3799999999999999
Q ss_pred ccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhc
Q 012802 323 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 374 (456)
Q Consensus 323 ~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~ 374 (456)
+.+||+|.|.+.++.++....+ .|++.+.++||+.+.++|+.+|.+.+...
T Consensus 233 d~~ADld~A~~ii~nAKtqrPs-~CNA~EtLLVh~~ia~~fLp~l~~~l~~~ 283 (417)
T COG0014 233 DESADLDKALKIIVNAKTQRPS-VCNAAETLLVHRAIAKSFLPKLANALQEA 283 (417)
T ss_pred cccCCHHHHHHHHHcccCCCCc-ccchHHHHHcCHHHHHHhHHHHHHHHHhc
Confidence 9999999999999999999998 99999999999999999999999988854
|
|
| >KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.82 E-value=4e-19 Score=167.88 Aligned_cols=253 Identities=22% Similarity=0.238 Sum_probs=196.9
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHH------hcCCChhhhh-----ccchHHHHHHH
Q 012802 106 NRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETW------DNGKPFEQSA-----QTEVPMTTRLF 174 (456)
Q Consensus 106 ~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~------e~Gk~~~~a~-----~~ev~~~~~~l 174 (456)
++..+.||.+.. .++.++.++|.++|.++++.|..+..++..+... +.|.....-. .+.+......+
T Consensus 3 e~~a~~aR~a~r--~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~GL~~sll~RL~l~~~K~~sl~~g~ 80 (433)
T KOG4165|consen 3 EEMAENAREAGR--ILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAGLAESLLKRLDLSPGKISSLAAGL 80 (433)
T ss_pred HHHHHHHHHHhh--HHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcCccHHHHHHhcCChHHHHHHHHHH
Confidence 455678888888 8999999999999999999999888777765544 4442211100 01222223333
Q ss_pred HHHHHHhHhhcCccc---CCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHH
Q 012802 175 RYYAGWADKIQGLTA---PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSK 251 (456)
Q Consensus 175 ~~~a~~~~~~~~~~~---~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~ 251 (456)
+..+..-+. -|..+ ....+...+....|+||.++| |....-.+....+.|++.||.++||....+..+...+.+
T Consensus 81 ~~ia~~edp-vGRVl~~~~ladgL~L~qvt~PiGvLLVI--FESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~~ 157 (433)
T KOG4165|consen 81 RQIAELEDP-VGRVLKKTRLADGLELEQVTVPIGVLLVI--FESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALHK 157 (433)
T ss_pred HHHHhcccc-hhhheeeeeccCCceEEEeeccceEEEEE--eccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHHH
Confidence 444432111 12211 134577778889999999999 777777777777889999999999999999999998888
Q ss_pred HHHHc----CCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEeccCCC
Q 012802 252 LLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDAD 327 (456)
Q Consensus 252 ~l~~a----GlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~daD 327 (456)
+..+| |.|.+.|++|+. ..++.+.|..+..||.|...||+...+.|... ..+||.-+-.|.+.+||++|||
T Consensus 158 ~v~~al~~~~~~~~aV~LV~s-REev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~----tkIPVLGHA~GichvYvd~dad 232 (433)
T KOG4165|consen 158 LVQEALGTHGGPGKAVQLVTS-REEVSDLLKLDDYIDLVIPRGSSDLVRSIKDT----TKIPVLGHAEGICHVYVDKDAD 232 (433)
T ss_pred HHHHHhhhccCchhhhhheec-HHHHHHHhhhhhheeEEecCCcHHHHHHHhhc----ccCcccccccceeEEEeccccC
Confidence 87766 779999999997 57788999999999999999999999988765 3489999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCCcccCCceeEeccc-----hHHHHHHHHHH
Q 012802 328 VDKAAELAHYALFFNQGQCCCAGSRTFVHES-----VYDQFVEKANA 369 (456)
Q Consensus 328 ~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~-----i~d~f~~~l~~ 369 (456)
+++|.+.+..+++.+.. .|++.+.+++|++ .++++...|.+
T Consensus 233 ~~kA~riv~DaK~dYPA-aCNAmETLLIh~dl~~~~~~~~l~~~l~~ 278 (433)
T KOG4165|consen 233 LDKAKRIVRDAKCDYPA-ACNAMETLLIHKDLEQSPFFDDLINMLKE 278 (433)
T ss_pred HHHHHHHHhcccCCCch-hhhhHHHHhccHhhhhcchHHHHHHHHHh
Confidence 99999999999999987 9999999999996 34555555544
|
|
| >PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins | Back alignment and domain information |
|---|
Probab=99.61 E-value=9e-13 Score=134.49 Aligned_cols=244 Identities=18% Similarity=0.142 Sum_probs=168.3
Q ss_pred CCCHHHHHHHHHHHHHHHHhc--HHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHH--HHhHhhcCcccCCC---CCc
Q 012802 123 RMTAYERSKIILRFADLLERH--NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA--GWADKIQGLTAPAD---GPY 195 (456)
Q Consensus 123 ~~~~~~R~~~L~~~a~~l~~~--~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a--~~~~~~~~~~~~~~---~~~ 195 (456)
.+|.++...+|.++++.+... .....+.+..-+|.+....+. +......|+.-. ...+.-.+.....+ ...
T Consensus 2 ~~~~~~Ii~~l~~~~~~~~~~~~~~r~~~~l~~~~g~~~~~~~~--l~~~~~~~~r~~L~~~l~~el~~~~~Ld~~~~~~ 79 (399)
T PF05893_consen 2 DLPVEEIIDFLDRVGKRWLDPDYPRRAIELLPKITGYSPEMVEY--LEALMRWFRRENLERKLERELGNPESLDGWVPRG 79 (399)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCchHHHHHhhhhhcCCCHHHHHH--HHHHHHhcCHHHHHHHHHHhcCCHhHhhcccccc
Confidence 356666666777776666643 222455555566666443221 222222211000 00111111111111 122
Q ss_pred eEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCC----CeEEEe--cCC
Q 012802 196 HVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPP----GVLNIV--SGY 269 (456)
Q Consensus 196 ~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~----gvv~vv--~g~ 269 (456)
..+..+.|.|++++|.|.|.|+..+.. ++.+|++||..|+|.|...+..+..|.+.|.+. .|. ..+.++ ++.
T Consensus 80 ~~~~~~~p~g~v~Hi~agNvp~~~~~S-~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~-~~~~~l~~~i~v~~~~~~ 157 (399)
T PF05893_consen 80 DGYVRAFPRGLVFHIAAGNVPLVGFYS-LVRGLLSGNANIVKLSSRDPFLAPALLRSLAEI-DPEHPLADSIAVVYWPGG 157 (399)
T ss_pred cchhhccCCceEEEEcCCCccchHHHH-HHHHHHhCCceEEECCCCchhHHHHHHHHHHhh-CccchhhhcEEEEEecCC
Confidence 366789999999999999999977665 567788999999999999999999999999886 554 446666 444
Q ss_pred chHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccC
Q 012802 270 GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCA 349 (456)
Q Consensus 270 ~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a 349 (456)
+.++...+. ...|+++.+||.++.+.|.+.+. ...+.+....-.+-.++..+++++.+++.+..-.+...+|.|.|
T Consensus 158 d~~~~~~~~--~~~D~vv~wGgd~ti~~ir~~~~--~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCsS 233 (399)
T PF05893_consen 158 DEELEEALS--QQADAVVAWGGDETIRAIRQPLP--PGARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACSS 233 (399)
T ss_pred chHHHHHHH--HHCCEEEEeCCHHHHHHHHHHcC--CCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccCC
Confidence 556677776 36899999999999999998543 23455555555666777778899999999999999999999999
Q ss_pred CceeEec---cchHHHHHHHHHHHhhhc
Q 012802 350 GSRTFVH---ESVYDQFVEKANALAMKR 374 (456)
Q Consensus 350 ~~~v~V~---~~i~d~f~~~l~~~~~~~ 374 (456)
++.|||. +.-.++|.++|.+++.+.
T Consensus 234 p~~ifv~~g~~~~~~~f~~~L~~~L~~~ 261 (399)
T PF05893_consen 234 PQVIFVETGDGDSVEEFAERLAEALERA 261 (399)
T ss_pred CeEEEEECCCcccHHHHHHHHHHHHHHH
Confidence 9999999 344678888887777764
|
The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.79 E-value=4.2e-08 Score=112.33 Aligned_cols=111 Identities=17% Similarity=0.104 Sum_probs=88.8
Q ss_pred ccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEec
Q 012802 188 TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVS 267 (456)
Q Consensus 188 ~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~ 267 (456)
.+|.+.|+.+..+..|+|++++|+||| ..++.+++.||++||+||+||++.++. .+ +.+|..+.+.+
T Consensus 1063 ~LPGPTGEsN~L~l~~RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~-------~~--~~Lp~~~~~~~- 1129 (1208)
T PRK11905 1063 ELPGPTGESNLLSLHPRGRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAA-------AL--ADLPGLVAARI- 1129 (1208)
T ss_pred cCCCCCCcceeEEecCCceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHH-------HH--HhCcccccccc-
Confidence 456677999999999999999999999 557889999999999999999998752 11 23676666555
Q ss_pred CCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCC--CCcEEEecC
Q 012802 268 GYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN--LKPVTLELG 315 (456)
Q Consensus 268 g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~--~~pv~lelg 315 (456)
..+..+..++.|++|.|+|++++.+.|.+..++|. +.|++.|..
T Consensus 1130 ----~~~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G~Ivpliaet~ 1175 (1208)
T PRK11905 1130 ----DWTQDWEADDPFAGALLEGDAERARAVRQALAARPGAIVPLIAAEP 1175 (1208)
T ss_pred ----ccccccccCCcccEEEEeCCHHHHHHHHHHHHhCCCCcceEEecCC
Confidence 23446778889999999999999999999998864 355555554
|
|
| >KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.22 E-value=3.3e-06 Score=71.23 Aligned_cols=86 Identities=27% Similarity=0.250 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHh-hCCCEEEeCCcccCCCCceEecEEEeeCCCCC
Q 012802 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV-DGGAKLETGGERLGAKGYYIKPTVFTGVKDDM 438 (456)
Q Consensus 360 ~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~-~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~ 438 (456)
.....+.|++..+.+++-+-..+++|. ....+++.++|+.-. ..|..+..-| .+.|+|+.||+|. |+|+|
T Consensus 8 aksW~~~lve~ak~l~v~~g~kp~tD~-----~a~~~ri~~liqS~~~~~~r~~yl~~---ya~~~f~~~tiLs-vtP~m 78 (157)
T KOG2449|consen 8 AKSWHPTLVEDAKVLKVNAGEKPQTDK-----YAPKVRIDKLIQSEDPLDGRFIYLPG---YAEGNFVGPTILS-VTPNM 78 (157)
T ss_pred hhhhhHHHHHhhhheEeccCCCCCccc-----hhHHHHHHHHhcCcCccCCceEEeec---cccCCcccceEEE-ecCCc
Confidence 356677888888888887777788886 556677888877621 1233333333 2579999999998 99999
Q ss_pred cccccccccceeEEEE
Q 012802 439 LIAKDEIFGPVQSILK 454 (456)
Q Consensus 439 ~i~~~EifGPvl~v~~ 454 (456)
.++.|||||||+..+.
T Consensus 79 s~ykeeI~gpVlv~l~ 94 (157)
T KOG2449|consen 79 SCYKEEIFGPVLVRLE 94 (157)
T ss_pred ceeHhhhhcceEEEEe
Confidence 9999999999998764
|
|
| >PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0011 Score=61.26 Aligned_cols=118 Identities=18% Similarity=0.139 Sum_probs=82.2
Q ss_pred CceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHH
Q 012802 318 SPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 397 (456)
Q Consensus 318 ~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~ 397 (456)
+-+||++|.|++.|+..++.+.-.--| ..+.-.|+|||++.|+|+++++.+++.+ ++.+.. ...+.+
T Consensus 6 ~lMIvfe~GDlnsA~~~L~~sl~~Pf~--~~~VatVlVqEsireefi~rvr~~m~pl------~~~va~-----Hpny~r 72 (215)
T PF07368_consen 6 QLMIVFEDGDLNSAMHYLLESLHNPFA--PGAVATVLVQESIREEFIERVRSRMKPL------SPQVAN-----HPNYLR 72 (215)
T ss_pred eEEEEEeCCCHHHHHHHHHHHHhCccc--CCcEEEEEEeHHHHHHHHHHHHHhCccC------Chhhcc-----CcHHHH
Confidence 458999999999999999999865544 5678889999999999999999988743 443332 234555
Q ss_pred HHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 398 ILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 398 ~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
-.+.++ .-+++++.++... .-..-.|.|+.+.+.+. +-. -..+|+++..|+
T Consensus 73 sl~~i~---~l~~~~I~~~~~~--~~~~aSPilV~d~~h~~--fg~-~PTgViTlhtFR 123 (215)
T PF07368_consen 73 SLKKIK---CLNAKTIVADFEN--VPPPASPILVCDFTHSY--FGD-GPTGVITLHTFR 123 (215)
T ss_pred HHHHHH---hcCCeEEEecccC--CCCCCCCEEEcCCCHHH--cCC-CCCeEEEEEccC
Confidence 555544 4689999885432 22345788888766532 222 444577776664
|
The function of this family is unknown. |
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0051 Score=71.51 Aligned_cols=103 Identities=14% Similarity=0.067 Sum_probs=78.1
Q ss_pred ccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEec
Q 012802 188 TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVS 267 (456)
Q Consensus 188 ~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~ 267 (456)
.+|.+.|+.+.....|+|+|+++.+-. ...+.+++++|++||.+|+..++. ... ++ +++|+.+.+.+.
T Consensus 1172 ~LPGPTGE~N~l~l~pRg~vLcl~~~~---~~~~~Ql~Aala~Gn~~v~~~~~~---~~~----~~--~~Lp~~v~~~v~ 1239 (1318)
T PRK11809 1172 LLPGPTGERNTYTLLPRERVLCLADTE---QDALTQLAAVLAVGSQALWPDDAL---HRA----LV--AALPAAVQARIQ 1239 (1318)
T ss_pred cCCCCCCCcceeeccCCCcEEEeCCCH---HHHHHHHHHHHHhCCEEEEeCCch---hHH----HH--HhccHHHHhHhh
Confidence 456778999999999999999998733 367889999999999998864433 222 22 469999888764
Q ss_pred CCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCC
Q 012802 268 GYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306 (456)
Q Consensus 268 g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~ 306 (456)
-. .........++.|.|.|..+..+.+.+..++|.
T Consensus 1240 ~~----~~~~~~~~~~~avl~~G~~~~l~~~~~~LA~R~ 1274 (1318)
T PRK11809 1240 LA----KDWQLADQPFDAVLFHGDSDQLRALCEQVAQRD 1274 (1318)
T ss_pred hc----cccccccCCccEEEEeCCHHHHHHHHHHHhcCC
Confidence 31 112223367999999999999999999998854
|
|
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=85.33 E-value=7.9 Score=40.92 Aligned_cols=109 Identities=17% Similarity=0.188 Sum_probs=73.8
Q ss_pred cCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecC
Q 012802 189 APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSG 268 (456)
Q Consensus 189 ~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g 268 (456)
++.+.++.+.....|.|-|+++.+ +....+.+++.+|+.||.+++-+.... +..+. .+|..+-..+.-
T Consensus 629 LpGptGErN~~~l~pr~rvl~~~~---~~~~~~~ql~a~la~G~~~v~~~~~~~-------aa~~~--~l~~~v~~~~~~ 696 (769)
T COG4230 629 LPGPTGERNTYTLHPRGRVLCVAG---DEQDLLTQLAAVLAVGNQVVIPEDSGL-------AALLK--DLPSAVASRIQV 696 (769)
T ss_pred cCCCcccceeecccCCccEEEeCC---CHHHHHHHHHHHHhcCCeEEecCcchH-------HHHHH--hchhhhhhheee
Confidence 445568889999999999999855 667888899999999999998654321 22222 255554222221
Q ss_pred CchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecC
Q 012802 269 YGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG 315 (456)
Q Consensus 269 ~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelg 315 (456)
.+ +. ...-.++.+.|-|..+-.+.+.+..+. ..-|++.-.+
T Consensus 697 ~~----~~-~~~~~~~~vl~~gd~~~~r~~~~~iA~-~~Gpiv~~~~ 737 (769)
T COG4230 697 AK----DW-TADIPFDAVLFHGDSDRLRALCEAIAA-RDGPIVSVQG 737 (769)
T ss_pred cc----ch-hhccceeeEEecCCHHHHHHHHHHHhc-CCCCeEEeec
Confidence 11 12 333568999999999999999997776 3345544333
|
|
| >COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=84.50 E-value=52 Score=33.84 Aligned_cols=167 Identities=16% Similarity=0.130 Sum_probs=94.4
Q ss_pred CCceEEEEEccceEEEEEcC---cChhHHHHHHHHhhhhhcCCEEEe--ecCCCChhHHHHHHHHHHHcCCCCCeEEEec
Q 012802 193 GPYHVQTLHEPIGVAGQIIP---WNFPLLMFAWKVGPALACGNTIVL--KTAEQTPLSALYVSKLLHEAGLPPGVLNIVS 267 (456)
Q Consensus 193 ~~~~~~~~~~P~GVv~~i~p---~n~P~~~~~~~l~~ALaaGN~VVl--kps~~~p~~~~~l~~~l~~aGlP~gvv~vv~ 267 (456)
.|.....++.|+--|++-.| .-||-..++. ..||-.+|+.=|+ -|+...- .+..+.-..+.+|+.+ +..
T Consensus 106 ~Gv~~g~~~~Pi~~VGlYVPGG~A~ypStvLM~-avPAkvAGv~~Iv~~tPp~~~g-v~p~iL~AA~~~Gv~e----Iy~ 179 (425)
T COG0141 106 PGVVLGQRWRPIERVGLYVPGGKAAYPSTVLMN-AVPAKVAGVEEIVVVTPPPKDG-VNPEILAAARLAGVDE----VYK 179 (425)
T ss_pred CCcEEEEEEEEhhheEEEccCCCcCChHHHHHh-hccHhhcCCceEEEECCCCCCC-CCHHHHHHHHHhCcHH----HHH
Confidence 46677789999999999999 5666666555 6789999986543 4444322 2333333344455532 111
Q ss_pred CCchHHHHHHHcC----CCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEecc-CCCHHHHHHHHHHHHhcc
Q 012802 268 GYGPTAGAALASH----MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCE-DADVDKAAELAHYALFFN 342 (456)
Q Consensus 268 g~~~~~~~~L~~~----~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~-daD~d~aa~~i~~~~~~~ 342 (456)
-.|...-.+|.-. +.||+|+=.|+.=+.-+ |.... +..-+=+..|-..-+|+.+ ++|.+.++..++.-+=..
T Consensus 180 vGGAQAIAAlAYGTetV~~VdkIvGPGN~yVtaA--Kr~v~-g~V~ID~~AGPSEvlViAD~ta~p~~vA~DLLsQAEHd 256 (425)
T COG0141 180 VGGAQAIAALAYGTETVPKVDKIVGPGNAYVTAA--KRLVS-GVVGIDMIAGPSEVLVIADETANPDFVAADLLSQAEHD 256 (425)
T ss_pred ccCHHHHHHHHccCCcCCccCeeeCCCcHHHHHH--HHHhh-CCcccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhhcC
Confidence 1245555666655 89999999888655332 21111 2222222334444445544 489999887766544333
Q ss_pred CCCcccCCceeEeccc--hHHHHHHHHHHHhhh
Q 012802 343 QGQCCCAGSRTFVHES--VYDQFVEKANALAMK 373 (456)
Q Consensus 343 ~GQ~C~a~~~v~V~~~--i~d~f~~~l~~~~~~ 373 (456)
. ..+.|+|..+ ..++..+++.+.+..
T Consensus 257 ~-----~a~aiLvT~s~~la~~v~~~v~~~l~~ 284 (425)
T COG0141 257 P-----DAQAILVTDSEELAEAVEAAVERQLET 284 (425)
T ss_pred C-----CceEEEEeCcHHHHHHHHHHHHHHHHh
Confidence 2 2345666554 344444455444444
|
|
| >COG1438 ArgR Arginine repressor [Transcription] | Back alignment and domain information |
|---|
Probab=83.99 E-value=9.8 Score=33.42 Aligned_cols=138 Identities=21% Similarity=0.192 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHHHHHh----cHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEc
Q 012802 127 YERSKIILRFADLLER----HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHE 202 (456)
Q Consensus 127 ~~R~~~L~~~a~~l~~----~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 202 (456)
++|.+.+++ .+.+ .++||.+.+..+ |..+.++.. ....+++.-..++.+.+...|....
T Consensus 5 ~~R~~~Ik~---iI~~~~i~TQ~Elv~~L~~~-Gi~vTQaTv-------------SRDlkelglvKv~~~~g~~~Y~l~~ 67 (150)
T COG1438 5 EERLELIKE---IITEEKISTQEELVELLQEE-GIEVTQATV-------------SRDLKELGLVKVRNEKGTYVYSLPA 67 (150)
T ss_pred HHHHHHHHH---HHHhCCCCCHHHHHHHHHHc-CCeEehHHH-------------HHHHHHcCCEEecCCCCcEEEEeCC
Confidence 345554444 4444 368888877544 433666432 2333444444455444545454444
Q ss_pred cceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCC
Q 012802 203 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 282 (456)
Q Consensus 203 P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~ 282 (456)
+.|+-.. ..+...+...+...=-.||-+|+|..|- .+..++.++...+.| +++..+.|++ +
T Consensus 68 ~~~~~~~----~~~~~~~~~~v~~vd~~~~~ivlkT~PG---~A~~ia~~lD~~~~~-eIlGTIaGdD-T---------- 128 (150)
T COG1438 68 ELGVPPT----SKLKRYLKDLVLSIDRNGNLIVLKTSPG---AAQLIARLLDSLAKD-EILGTIAGDD-T---------- 128 (150)
T ss_pred ccCCCch----hhHHHHHHHHheeeccCCcEEEEEeCCc---hHHHHHHHHHhcCch-hhheeeeCCC-e----------
Confidence 4443221 2232334455556666899999998755 789999999998888 8898888742 1
Q ss_pred ccEEEEeCChHHHHHHHHHH
Q 012802 283 VDKLAFTGSTTTGKIVLQLA 302 (456)
Q Consensus 283 v~~V~ftGS~~~g~~i~~~a 302 (456)
.++.+-|.+.++.+.+..
T Consensus 129 --ilVi~r~~~~a~~l~~~l 146 (150)
T COG1438 129 --ILVICRSEETAKELYEEL 146 (150)
T ss_pred --EEEEecCchhHHHHHHHH
Confidence 244455666677666554
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 456 | ||||
| 1ag8_A | 499 | Aldehyde Dehydrogenase From Bovine Mitochondria Len | 1e-141 | ||
| 2onn_A | 500 | Arg475gln Mutant Of Human Mitochondrial Aldehyde De | 1e-139 | ||
| 1o05_A | 500 | Apo Form Of Human Mitochondrial Aldehyde Dehydrogen | 1e-139 | ||
| 1cw3_A | 494 | Human Mitochondrial Aldehyde Dehydrogenase Complexe | 1e-139 | ||
| 1zum_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 1e-139 | ||
| 3n81_A | 500 | T244a Mutant Of Human Mitochondrial Aldehyde Dehydr | 1e-139 | ||
| 1nzw_A | 500 | Cys302ser Mutant Of Human Mitochondrial Aldehyde De | 1e-138 | ||
| 3n80_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase, Apo For | 1e-138 | ||
| 3inl_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 1e-138 | ||
| 1bi9_A | 499 | Retinal Dehydrogenase Type Two With Nad Bound Lengt | 1e-138 | ||
| 4fr8_A | 500 | Crystal Structure Of Human Aldehyde Dehydrogenase-2 | 1e-137 | ||
| 1bxs_A | 501 | Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad | 1e-132 | ||
| 1o9j_A | 501 | The X-Ray Crystal Structure Of Eta-Crystallin Lengt | 1e-126 | ||
| 2o2p_A | 517 | Crystal Structure Of The C-Terminal Domain Of Rat 1 | 2e-98 | ||
| 3rhm_A | 517 | Crystal Structure Of The E673q Mutant Of C-Terminal | 4e-98 | ||
| 3rhj_A | 517 | Crystal Structure Of The E673a Mutant Of The C-Term | 9e-98 | ||
| 3rhr_A | 517 | Crystal Structure Of The C707a Mutant Of The C-Term | 2e-97 | ||
| 4gnz_A | 517 | Crystal Structure Of The C707s Mutant Of C-terminal | 3e-97 | ||
| 3rhl_A | 517 | Crystal Structure Of The E673aC707A DOUBLE MUTANT O | 1e-96 | ||
| 2wme_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 2e-88 | ||
| 2wox_A | 489 | Betaine Aldehyde Dehydrogenase From Pseudomonas Aer | 2e-88 | ||
| 2xdr_A | 489 | Crystallographic Structure Of Betaine Aldehyde Dehy | 9e-88 | ||
| 3zqa_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 3e-87 | ||
| 2wme_C | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 3e-87 | ||
| 4a0m_A | 496 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 4e-83 | ||
| 2d4e_A | 515 | Crystal Structure Of The Hpcc From Thermus Thermoph | 4e-79 | ||
| 3iwj_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 2 | 1e-75 | ||
| 3iwk_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1 | 9e-74 | ||
| 3ed6_A | 520 | 1.7 Angstrom Resolution Crystal Structure Of Betain | 1e-72 | ||
| 1a4s_A | 503 | Betaine Aldehyde Dehydrogenase From Cod Liver Lengt | 1e-72 | ||
| 3u4j_A | 528 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 3e-72 | ||
| 4i8p_A | 520 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1a | 2e-71 | ||
| 4i9b_A | 517 | Structure Of Aminoaldehyde Dehydrogenase 1 From Sol | 2e-71 | ||
| 3jz4_A | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 3e-71 | ||
| 3jz4_C | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 3e-71 | ||
| 4i8q_A | 514 | Structure Of The Aminoaldehyde Dehydrogenase 1 E260 | 1e-70 | ||
| 3r31_A | 517 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 2e-70 | ||
| 3ek1_A | 504 | Crystal Structure Of Aldehyde Dehydrogenase From Br | 4e-67 | ||
| 3ifg_A | 484 | Crystal Structure Of Succinate-Semialdehyde Dehydro | 7e-67 | ||
| 1wnb_A | 495 | Escherichia Coli Ydcw Gene Product Is A Medium-Chai | 2e-65 | ||
| 4dal_A | 498 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 3e-64 | ||
| 2opx_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 5e-64 | ||
| 2hg2_A | 479 | Structure Of Lactaldehyde Dehydrogenase Length = 47 | 5e-64 | ||
| 2imp_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 5e-64 | ||
| 3i44_A | 497 | Crystal Structure Of Aldehyde Dehydrogenase From Ba | 1e-63 | ||
| 3ty7_A | 478 | Crystal Structure Of Aldehyde Dehydrogenase Family | 5e-63 | ||
| 2w8n_A | 487 | The Crytal Structure Of The Oxidized Form Of Human | 3e-61 | ||
| 2w8p_A | 487 | The Crystal Structure Of Human C340a Ssadh Length = | 4e-60 | ||
| 3k2w_A | 497 | Crystal Structure Of Betaine-Aldehyde Dehydrogenase | 4e-59 | ||
| 3b4w_A | 495 | Crystal Structure Of Mycobacterium Tuberculosis Ald | 6e-59 | ||
| 3r64_A | 508 | Crystal Structure Of A Nad-Dependent Benzaldehyde D | 5e-55 | ||
| 3qan_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 7e-54 | ||
| 1t90_A | 486 | Crystal Structure Of Methylmalonate Semialdehyde De | 2e-50 | ||
| 3rjl_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 2e-50 | ||
| 3rh9_A | 506 | The Crystal Structure Of Oxidoreductase From Marino | 6e-49 | ||
| 4dng_A | 485 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 3e-47 | ||
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate Dehydrogenase Length = 51 | 4e-46 | ||
| 3prl_A | 505 | Crystal Structure Of Nadp-Dependent Glyceraldehyde- | 6e-46 | ||
| 2bhp_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 6e-46 | ||
| 3pqa_A | 486 | Crystal Structure Of Glyceraldehyde-3-Phosphate Deh | 3e-45 | ||
| 2bja_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 1e-44 | ||
| 2jg7_A | 510 | Crystal Structure Of Seabream Antiquitin And Elucid | 2e-42 | ||
| 1euh_A | 475 | Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase | 2e-42 | ||
| 2id2_A | 475 | Gapn T244s Mutant X-Ray Structure At 2.5 A Length = | 4e-42 | ||
| 2esd_A | 475 | Crystal Structure Of Thioacylenzyme Intermediate Of | 1e-41 | ||
| 1qi1_A | 475 | Ternary Complex Of An Nadp Dependent Aldehyde Dehyd | 4e-41 | ||
| 3ros_A | 484 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 6e-38 | ||
| 2j6l_A | 500 | Structure Of Aminoadipate-Semialdehyde Dehydrogenas | 6e-38 | ||
| 1ky8_A | 501 | Crystal Structure Of The Non-Phosphorylating Glycer | 1e-36 | ||
| 4f9i_A | 1026 | Crystal Structure Of Proline Utilization A (Puta) F | 1e-36 | ||
| 1uxv_A | 501 | Structural Basis For Allosteric Regulation And Subs | 5e-36 | ||
| 1uxn_A | 501 | Structural Basis For Allosteric Regulation And Subs | 8e-36 | ||
| 3efv_A | 462 | Crystal Structure Of A Putative Succinate-Semialdeh | 5e-35 | ||
| 3haz_A | 1001 | Crystal Structure Of Bifunctional Proline Utilizati | 6e-35 | ||
| 3ju8_A | 490 | Crystal Structure Of Succinylglutamic Semialdehyde | 5e-34 | ||
| 4e4g_A | 521 | Crystal Structure Of Putative Methylmalonate-Semial | 9e-34 | ||
| 4h7n_A | 474 | The Structure Of Putative Aldehyde Dehydrogenase Pu | 5e-28 | ||
| 3v9j_A | 563 | Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat | 4e-27 | ||
| 3sza_A | 469 | Crystal Structure Of Human Aldh3a1 - Apo Form Lengt | 6e-27 | ||
| 1ad3_A | 452 | Class 3 Aldehyde Dehydrogenase Complex With Nicotin | 3e-26 | ||
| 3v9g_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 2e-25 | ||
| 3v9h_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 3e-25 | ||
| 3lv1_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 4e-25 | ||
| 3v9i_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 8e-25 | ||
| 3lns_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 1e-23 | ||
| 2y53_A | 534 | Crystal Structure Of E257q Mutant Of The Box Pathwa | 9e-19 | ||
| 2vro_A | 532 | Crystal Structure Of Aldehyde Dehydrogenase From Bu | 1e-18 | ||
| 2y51_A | 534 | Crystal Structure Of E167a Mutant Of The Box Pathwa | 1e-18 | ||
| 2y52_A | 534 | Crystal Structure Of E496a Mutant Of The Box Pathwa | 1e-18 | ||
| 2y5d_A | 534 | Crystal Structure Of C296a Mutant Of The Box Pathwa | 2e-17 | ||
| 3v4c_A | 528 | Crystal Structure Of A Semialdehyde Dehydrogenase F | 5e-11 | ||
| 1eyy_A | 510 | Crystal Structure Of The Nadp+ Dependent Aldehyde D | 8e-08 | ||
| 3my7_A | 452 | The Crystal Structure Of The Acdh Domain Of An Alco | 4e-05 |
| >pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499 | Back alignment and structure |
|
| >pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494 | Back alignment and structure |
|
| >pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500 | Back alignment and structure |
|
| >pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500 | Back alignment and structure |
|
| >pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499 | Back alignment and structure |
|
| >pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500 | Back alignment and structure |
|
| >pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501 | Back alignment and structure |
|
| >pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501 | Back alignment and structure |
|
| >pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517 | Back alignment and structure |
|
| >pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489 | Back alignment and structure |
|
| >pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489 | Back alignment and structure |
|
| >pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490 | Back alignment and structure |
|
| >pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496 | Back alignment and structure |
|
| >pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515 | Back alignment and structure |
|
| >pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503 | Back alignment and structure |
|
| >pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503 | Back alignment and structure |
|
| >pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520 | Back alignment and structure |
|
| >pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503 | Back alignment and structure |
|
| >pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528 | Back alignment and structure |
|
| >pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520 | Back alignment and structure |
|
| >pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517 | Back alignment and structure |
|
| >pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514 | Back alignment and structure |
|
| >pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517 | Back alignment and structure |
|
| >pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504 | Back alignment and structure |
|
| >pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484 | Back alignment and structure |
|
| >pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495 | Back alignment and structure |
|
| >pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498 | Back alignment and structure |
|
| >pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479 | Back alignment and structure |
|
| >pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479 | Back alignment and structure |
|
| >pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479 | Back alignment and structure |
|
| >pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497 | Back alignment and structure |
|
| >pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478 | Back alignment and structure |
|
| >pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497 | Back alignment and structure |
|
| >pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495 | Back alignment and structure |
|
| >pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508 | Back alignment and structure |
|
| >pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538 | Back alignment and structure |
|
| >pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486 | Back alignment and structure |
|
| >pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538 | Back alignment and structure |
|
| >pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506 | Back alignment and structure |
|
| >pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485 | Back alignment and structure |
|
| >pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516 | Back alignment and structure |
|
| >pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505 | Back alignment and structure |
|
| >pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516 | Back alignment and structure |
|
| >pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486 | Back alignment and structure |
|
| >pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516 | Back alignment and structure |
|
| >pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510 | Back alignment and structure |
|
| >pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475 | Back alignment and structure |
|
| >pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475 | Back alignment and structure |
|
| >pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484 | Back alignment and structure |
|
| >pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501 | Back alignment and structure |
|
| >pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026 | Back alignment and structure |
|
| >pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462 | Back alignment and structure |
|
| >pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001 | Back alignment and structure |
|
| >pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490 | Back alignment and structure |
|
| >pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521 | Back alignment and structure |
|
| >pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474 | Back alignment and structure |
|
| >pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563 | Back alignment and structure |
|
| >pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469 | Back alignment and structure |
|
| >pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452 | Back alignment and structure |
|
| >pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566 | Back alignment and structure |
|
| >pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566 | Back alignment and structure |
|
| >pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457 | Back alignment and structure |
|
| >pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566 | Back alignment and structure |
|
| >pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457 | Back alignment and structure |
|
| >pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Burkholderia Xenovorans Lb400 Length = 532 | Back alignment and structure |
|
| >pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 528 | Back alignment and structure |
|
| >pdb|1EYY|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde Dehydrogenase From Vibrio Harveyi. Length = 510 | Back alignment and structure |
|
| >pdb|3MY7|A Chain A, The Crystal Structure Of The Acdh Domain Of An Alcohol Dehyd From Vibrio Parahaemolyticus To 2.25a Length = 452 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500 | Back alignment and structure |
|---|
Score = 743 bits (1921), Expect = 0.0
Identities = 242/411 (58%), Positives = 298/411 (72%), Gaps = 4/411 (0%)
Query: 50 AAAAEDPITPPVK---VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVN 106
+AAA + P + V Q+ IN ++ D+ S KTFPT++P TG+VI VAEG+ EDV+
Sbjct: 1 SAAATQAVPAPNQQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVD 60
Query: 107 RAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165
+AV AAR AF G PW RM A R +++ R ADL+ER +AALET DNGKP+ S
Sbjct: 61 KAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLV 120
Query: 166 EVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225
++ M + RYYAGWADK G T P DG + T HEP+GV GQIIPWNFPLLM AWK+G
Sbjct: 121 DLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLG 180
Query: 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDK 285
PALA GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK
Sbjct: 181 PALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDK 240
Query: 286 LAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQ 345
+AFTGST G+++ A SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQ
Sbjct: 241 VAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQ 300
Query: 346 CCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 405
C CAGSRTFV E +YD+FVE++ A A RVVG+PF +QGPQ+D QF+KIL YI +G
Sbjct: 301 CSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTG 360
Query: 406 VDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
GAKL GG +GY+I+PTVF V+D M IAK+EIFGPV ILK+K
Sbjct: 361 KQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFK 411
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501 | Back alignment and structure |
|---|
Score = 743 bits (1921), Expect = 0.0
Identities = 228/411 (55%), Positives = 291/411 (70%), Gaps = 1/411 (0%)
Query: 47 SSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVN 106
SS+A ++ YT++ IN ++ S SGK FP +P T + + V EG+ EDV+
Sbjct: 2 SSSAMPDVPAPLTNLQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVD 61
Query: 107 RAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165
+AV AAR+AF G PW M A ER +++ + ADL+ER +A +E + GK F +
Sbjct: 62 KAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLM 121
Query: 166 EVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225
++ + RY AGWADKIQG T P DG + T EP+GV GQIIPWNFPLLMF WK+G
Sbjct: 122 DLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIG 181
Query: 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDK 285
PAL+CGNT+V+K AEQTPL+AL++ L+ EAG PPGV+NIV GYGPTAGAA++SHM+VDK
Sbjct: 182 PALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDK 241
Query: 286 LAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQ 345
+AFTGST GK++ + A KSNLK V+LELGGKSP IV DAD+D A E AH +F++QGQ
Sbjct: 242 VAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQ 301
Query: 346 CCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 405
CC A SR FV ES+YD+FV ++ A K V+G+P G+ QGPQID EQ+EKIL I SG
Sbjct: 302 CCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESG 361
Query: 406 VDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
GAKLE GG G KGY+I+PTVF+ V DDM IAK+EIFGPVQ I+K+K
Sbjct: 362 KKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFK 412
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517 | Back alignment and structure |
|---|
Score = 736 bits (1902), Expect = 0.0
Identities = 169/420 (40%), Positives = 256/420 (60%), Gaps = 7/420 (1%)
Query: 44 STASSAAAAAEDPITPPVKVDY---TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEG 100
+ K+ QL I G+FVD+ KT+ T++P G VI V+
Sbjct: 12 GEDDESECVINYVEKAVNKLTLQMPYQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLA 71
Query: 101 EAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE 160
+ DV++AV+AA++AF+ G W ++ A +R +++ R AD++E+H +E+A +E D G +
Sbjct: 72 QVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYT 131
Query: 161 QSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGP----YHVQTLHEPIGVAGQIIPWNFP 216
+ +T V M+ + FRY+AGW DKIQG T P + T EP+GV G +IPWN+P
Sbjct: 132 LALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYP 191
Query: 217 LLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAA 276
L+M +WK LA GNT+V+K A+ TPL+AL ++L +AG+P GV+NI+ G G G
Sbjct: 192 LMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQR 251
Query: 277 LASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAH 336
L+ H +V K+ FTGST GK +++ A SN+K V+LELGGKSP I+ D D++KA ++
Sbjct: 252 LSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGM 311
Query: 337 YALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFE 396
++FFN+G+ C A R FV ES+++QFV+K K +G+P + GPQ
Sbjct: 312 SSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLR 371
Query: 397 KILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
K+++Y + GV GA L GG ++ G++ +PTVFT V+D M IAK+E FGP+ I ++
Sbjct: 372 KLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFA 431
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520 | Back alignment and structure |
|---|
Score = 715 bits (1847), Expect = 0.0
Identities = 148/417 (35%), Positives = 230/417 (55%), Gaps = 7/417 (1%)
Query: 45 TASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAED 104
+ + +K + I+G++V+SA+ T ++P +VI V+EG ED
Sbjct: 12 DLGTENLYFQSNAMELLKHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKED 71
Query: 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164
RA+ AAR+AF+ G W + TA R K + AD ++ H + +A LET D GK E+ +
Sbjct: 72 AERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEE-SY 130
Query: 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223
++ +F Y+AG ADK G + P + + EP+GV QI PWN+PLL +WK
Sbjct: 131 ADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWK 190
Query: 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEV 283
+ PALA G ++V+K +E TPL+ + V +L+ E G P G +N++ G G G ++ H EV
Sbjct: 191 IAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEV 250
Query: 284 DKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQ 343
D ++FTG TGK +++ AA +N+ + LELGGK+P I+ +DAD + A + A +F+
Sbjct: 251 DLVSFTGGIETGKHIMKNAA-NNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHA 309
Query: 344 GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 403
GQ C AGSR V S+ D+F + K +G+ F + GP I +E KI Y+
Sbjct: 310 GQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMD 369
Query: 404 SGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
GA + GG+R G + +PTV T M I ++E+FGPV ++ ++
Sbjct: 370 VAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFE 426
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 710 bits (1834), Expect = 0.0
Identities = 173/415 (41%), Positives = 247/415 (59%), Gaps = 6/415 (1%)
Query: 46 ASSAAAAAEDPITPPVKVD-YTQLLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAE 103
+ A D P +++ Q+L++G+ VD+ASG T + P G+V+ E A+
Sbjct: 2 VMLSNFIAPDSNDPRLRIKSRYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASAD 61
Query: 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163
DV +AV+AARKAFD GPWPRM+ ERS+++ + ADL+ +E+A +E+ + GKP Q A
Sbjct: 62 DVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILARQEELALIESLEVGKPIAQ-A 120
Query: 164 QTEVPMTTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAW 222
+ E+ L+ Y AG A ++G T G L EP+GV G I PWNFP ++ +
Sbjct: 121 RGEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASE 180
Query: 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 282
+V A+ G T+VLK +E T +++ +++L EAG+P GV N+V+GYG AG LA
Sbjct: 181 RVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPN 240
Query: 283 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 342
VD +AFTGS G + ++AA+ +K V LELGGK P IV DAD+D AA+ Y ++ N
Sbjct: 241 VDMVAFTGSVRVGTKLGEIAAR-TVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHN 299
Query: 343 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 402
GQCC +GSR V E + D +E+ ++ K GDP + G I EK+ Y+
Sbjct: 300 AGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYV 359
Query: 403 RSGVDGGAKLETGGERLGA-KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
+G+ GA+L GGER+G G Y PTVF GV DM IA++EIFGPV S L +K
Sbjct: 360 TAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFK 414
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503 | Back alignment and structure |
|---|
Score = 706 bits (1824), Expect = 0.0
Identities = 157/405 (38%), Positives = 229/405 (56%), Gaps = 11/405 (2%)
Query: 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDE-- 118
+ + QL ING + K P ++P T ++I + EDV+ AV+AA+ A
Sbjct: 3 IPIPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNK 62
Query: 119 -GPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYY 177
W + R++ + A + E+A LE+ D GKP ++ A ++ F YY
Sbjct: 63 GADWATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDE-AAWDIDDVAGCFEYY 121
Query: 178 AGWADKIQGLTAPA----DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 233
A A+K+ + L EPIGV G I PWN+P+LM WKV PALA G
Sbjct: 122 ADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCA 181
Query: 234 IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 293
+LK +E L+ L + ++ E GLPPGVLNI++G GP AGA LA+H +VDK+AFTGS+
Sbjct: 182 AILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSA 241
Query: 294 TGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRT 353
TG ++ AA+ +KPV+LELGGKSP +V ED D+DKAAE A + F+ GQ C A SR
Sbjct: 242 TGSKIMTAAAQ-LVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRL 300
Query: 354 FVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLE 413
+HES+ +F+ + + DP + G + GP + Q+EKILK++ + GA +
Sbjct: 301 ILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATIL 360
Query: 414 TGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
TGG R KG++I+PT+ T V +M I ++E+FGPV + +
Sbjct: 361 TGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFS 405
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515 | Back alignment and structure |
|---|
Score = 699 bits (1806), Expect = 0.0
Identities = 165/422 (39%), Positives = 241/422 (57%), Gaps = 14/422 (3%)
Query: 44 STASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAE 103
+ + + + +K I G+FV S SG+TFP+LDP T +V+ A G
Sbjct: 5 DRVAGISWETIEEVRRRLKERPALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGER 64
Query: 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSA 163
+V+RA AA +AF W R A ER + +LR A+L+E+H DE+A +E D G+
Sbjct: 65 EVDRAAKAAHEAFQ--RWSRTKAKERKRYLLRIAELIEKHADELAVMECLDAGQVLRI-V 121
Query: 164 QTEVPMTTRLFRYYAGWADK-IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222
+ +V F +YA +A+ ++ T P D + T+ P G G I PWN PL++ W
Sbjct: 122 RAQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTW 181
Query: 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHME 282
++ PALA GNT+VLK AE +P +A ++++L EA LPPGV N+V G+G AGAAL +H
Sbjct: 182 RIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPL 241
Query: 283 VDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFN 342
V L TG T TGKIV++ AA +LK ++ ELGGKSP +V DAD+++A + + +F
Sbjct: 242 VPLLTLTGETETGKIVMRNAA-DHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSF 300
Query: 343 QGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 402
G+ C A SR V E +++ FV K A VG P + GP I E +++L Y+
Sbjct: 301 NGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYV 360
Query: 403 RSGVDGGAKLETGGERLG--------AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 454
+G GA+L GGER ++G Y+ PTVF G ++ M IA++EIFGPV +
Sbjct: 361 EAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIP 419
Query: 455 YK 456
+K
Sbjct: 420 FK 421
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503 | Back alignment and structure |
|---|
Score = 696 bits (1800), Expect = 0.0
Identities = 149/417 (35%), Positives = 223/417 (53%), Gaps = 12/417 (2%)
Query: 47 SSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTF-PTLDPRTGDVITHVAEGEAEDV 105
+ + T V V G+ + S G T P +P TG V+ + AE+V
Sbjct: 1 AQLVDSMPSASTGSVVVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEV 60
Query: 106 NRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165
++AV +A+ A+ W +M ERS+++L A ++ D IA LE +NGK A+
Sbjct: 61 DQAVQSAQAAYL--KWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTI-TEAEY 117
Query: 166 EVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225
++ + YYAG A + G G T EP+GV I+ WN+P ++ AWK
Sbjct: 118 DIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCA 177
Query: 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDK 285
PALACGN +V K + TP++ + ++++ HEAG+P G++N+V G G G+ L H V K
Sbjct: 178 PALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAK 236
Query: 286 LAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQ 345
++FTGS TGK V++++AK +K VTLELGGKSP ++ +D +++ A A A F QGQ
Sbjct: 237 VSFTGSVPTGKKVMEMSAK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQ 295
Query: 346 CCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSG 405
C G+R FV + QF+E+ VVGDP + G I Q +K+L ++
Sbjct: 296 VCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQA 355
Query: 406 VDGGAKLETGGERLG------AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
GA++ GGE L GY++ P V +DDM K+EIFGPV S+L +
Sbjct: 356 KKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFD 412
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517 | Back alignment and structure |
|---|
Score = 693 bits (1790), Expect = 0.0
Identities = 149/403 (36%), Positives = 217/403 (53%), Gaps = 9/403 (2%)
Query: 58 TPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFD 117
TP I+G +V+ +G F ++ P TG++I + V RA+++A++A
Sbjct: 7 TPLKAQPKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQ- 65
Query: 118 EGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYY 177
W M+ R +I+ R AD++ ND ++ LET D GKP +++ + F ++
Sbjct: 66 -KEWAAMSPMARGRILKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSGADAFEFF 124
Query: 178 AGWA-DKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVL 236
G A + G P G T P+GV I WN+P + WK PAL GN +V
Sbjct: 125 GGIAPSALNGDYIPLGGD-FAYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVF 183
Query: 237 KTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGK 296
K +E TPL AL ++++L EAGLP G+ N++ G T G L +H +V K++ TGS TG+
Sbjct: 184 KPSENTPLGALKIAEILIEAGLPKGLFNVIQGDRDT-GPLLVNHPDVAKVSLTGSVPTGR 242
Query: 297 IVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVH 356
V AA +LK VT+ELGGKSP IV +DAD++ A A F++ GQ C G+R FV
Sbjct: 243 KVAAAAA-GHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQ 301
Query: 357 ESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG 416
+ +F+E ++GDP GP + Q EK+L YI G GA L TGG
Sbjct: 302 KKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGG 361
Query: 417 ---ERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
+ +G Y++PTVF V DDM IA++EIFGPV +L +
Sbjct: 362 GIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFD 404
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495 | Back alignment and structure |
|---|
Score = 683 bits (1766), Expect = 0.0
Identities = 146/413 (35%), Positives = 215/413 (52%), Gaps = 7/413 (1%)
Query: 46 ASSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDV 105
+ + +LLING+ V G+ P +P TGDV+ +AE AE V
Sbjct: 4 HHHHHHLESTSLYKKAGLMQHKLLINGELVS-GEGEKQPVYNPATGDVLLEIAEASAEQV 62
Query: 106 NRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQT 165
+ AV AA AF W + T R++ +L+ AD++E + A LE+ + GKP +
Sbjct: 63 DAAVRAADAAF--AEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFND 120
Query: 166 EVPMTTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224
E+P +FR++AG A + GL A + +P+GV I PWN+PL+M AWK+
Sbjct: 121 EIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKL 180
Query: 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVD 284
PALA GN +VLK +E TPL+AL +++L + P GV+NI+ G G T G L H +V
Sbjct: 181 APALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVR 239
Query: 285 KLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 344
++ TGS TG+ ++ A S++K +ELGGK+P IV +DAD++ E ++N G
Sbjct: 240 MVSLTGSIATGEHIISHTA-SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAG 298
Query: 345 QCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 404
Q C A R + + +YD VEK A G P + GP E++ K +
Sbjct: 299 QDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEE 358
Query: 405 GV-DGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
G K+ TGGE+ GYY PT+ G D I + E+FGPV S+ +
Sbjct: 359 AKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFD 411
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498 | Back alignment and structure |
|---|
Score = 677 bits (1750), Expect = 0.0
Identities = 139/411 (33%), Positives = 211/411 (51%), Gaps = 7/411 (1%)
Query: 48 SAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNR 107
S+ + TQLLI +F + L+PRTG I +AE ++
Sbjct: 8 SSGVDLGTENLYFQSMMDTQLLIGSRFEA-GTEAEEHILNPRTGAGIIDLAEASHAQIDA 66
Query: 108 AVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEV 167
AV AA +AF W + T ERS +L+ AD +E+ DE AALE + GKP E+
Sbjct: 67 AVDAAERAFV--GWSQTTPAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDEL 124
Query: 168 PMTTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 226
P +R++AG + A P + +PIG+ G I PWN+PL+M AWK+ P
Sbjct: 125 PAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAP 184
Query: 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKL 286
A+ GNT+V K +EQTPL+AL +++L+ + LP GV+N+++G G T G AL +H +V +
Sbjct: 185 AIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMV 243
Query: 287 AFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQC 346
+ TG TGK VL AAK +K LELGGK+P IV DAD++ ++N GQ
Sbjct: 244 SITGDIATGKKVLAAAAK-TVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQD 302
Query: 347 CCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV 406
C A R + +Y++ V + + GP I Q +++ ++
Sbjct: 303 CTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAA 362
Query: 407 D-GGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
D ++ TGG +G++ +PTV G + I + E+FGPV S+ ++
Sbjct: 363 DQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFT 413
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495 | Back alignment and structure |
|---|
Score = 631 bits (1630), Expect = 0.0
Identities = 145/396 (36%), Positives = 204/396 (51%), Gaps = 4/396 (1%)
Query: 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP 122
+Y +L I G++ ++ P TG+ + V A DV+ AV+AAR AFD GPWP
Sbjct: 6 TEYDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWP 65
Query: 123 RMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWAD 182
+ER+ +I +L D L + G+P + Y+AG AD
Sbjct: 66 STPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAAD 125
Query: 183 KIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQT 242
K+ EP+GV G I+ WN PL + K+ PAL G TIVLK A +T
Sbjct: 126 KVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAET 185
Query: 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
PL+A ++++ E GLP GVL++V G G G AL S+ ++D FTGS+ G+ V + A
Sbjct: 186 PLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRA 244
Query: 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQ 362
A+ LKP TLELGGKS I+ ED D+ A + ++ N GQ C +R S YD+
Sbjct: 245 AE-MLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDE 303
Query: 363 FVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-- 420
V VG P Q GP I +Q ++ YI G++ GA+L GG R
Sbjct: 304 IVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGL 363
Query: 421 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
G++I+PTVF V + M IA++EIFGPV +I+ Y
Sbjct: 364 DNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYD 399
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497 | Back alignment and structure |
|---|
Score = 614 bits (1587), Expect = 0.0
Identities = 138/413 (33%), Positives = 221/413 (53%), Gaps = 7/413 (1%)
Query: 47 SSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVN 106
P ++ + ING + D ++ +DP T + ++ G D +
Sbjct: 7 HHMGTLEAQTQGPGSMLNKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDAD 66
Query: 107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTE 166
+A++AA+KAF W + +ER + + ++ E+ + ++A + + G P + + +
Sbjct: 67 KAINAAKKAFQ--TWKTTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQ 124
Query: 167 VPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 226
+ R + + A +G ++ IGV G I PWN+P+ KV P
Sbjct: 125 TATGSSHIRNFIKAYKEFSFQEALIEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIP 184
Query: 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKL 286
AL G T+VLK +E PLSA+ +++L EA LP GV N+++G G G+ L++H +++ +
Sbjct: 185 ALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMI 244
Query: 287 AFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQC 346
+FTGST GK + + A+ LK V LELGGK I+ DAD+D A + F+N GQ
Sbjct: 245 SFTGSTRAGKDISKNASN-TLKRVCLELGGKGANIIFADADID-ALQRGVRHCFYNSGQS 302
Query: 347 CCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV 406
C A +R V +++YD+ ++ A +A K VG + G GP + EQ++KI I+SG+
Sbjct: 303 CNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGI 362
Query: 407 DGGAKLETGGERLGA---KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
D GA L TGG L +GYY++PTVF VK M I ++EIFGPV S+L +
Sbjct: 363 DEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFN 415
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538 | Back alignment and structure |
|---|
Score = 614 bits (1586), Expect = 0.0
Identities = 136/415 (32%), Positives = 210/415 (50%), Gaps = 14/415 (3%)
Query: 49 AAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNR 107
A A + + +Y L+ING+ V + + +P R ++ V++ + +
Sbjct: 22 AFEEALGLVEKELGKEY-PLIINGERVTT--EDKIQSWNPARKDQLVGSVSKANQDLAEK 78
Query: 108 AVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEV 167
A+ +A +AF W + ER+ I+++ A ++ R E +A + GKP+++ A +
Sbjct: 79 AIQSADEAFQ--TWRNVNPEERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKE-ADADT 135
Query: 168 PMTTRLFRYYAGWADKI-QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 226
YYA ++ +G + + + P+GV I PWNF L +
Sbjct: 136 AEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVA 195
Query: 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKL 286
+ GNT+VLK A TP+ A ++L +AGLP GV+N V G G G L H + +
Sbjct: 196 PIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLI 255
Query: 287 AFTGSTTTGKIVLQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFF 341
FTGS G + + AA ++LK V +E+GGK +V DAD+D AAE + F
Sbjct: 256 TFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFG 315
Query: 342 NQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 401
GQ C AGSR +H+ VYD+ +EK ALA VGDP GP ID + FEKI+ Y
Sbjct: 316 FSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSY 375
Query: 402 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
I G G +L TGGE + G++I+PT+ + + +I ++EIFGPV + K
Sbjct: 376 IEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKAN 429
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478 | Back alignment and structure |
|---|
Score = 609 bits (1572), Expect = 0.0
Identities = 142/396 (35%), Positives = 218/396 (55%), Gaps = 10/396 (2%)
Query: 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPR 123
DYT+ ING++V+S S +T ++P T +VI VA+G DV++AV AA + E +
Sbjct: 6 DYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLE--FRH 63
Query: 124 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 183
+ ER ++ + E D+I T + G P S + M F D
Sbjct: 64 TSVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDN 123
Query: 184 IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 243
+ D + E IGV+G I PWNFP + K+ A A G+ +VLK +E+TP
Sbjct: 124 YEFEERRGDD----LVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETP 179
Query: 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303
+A+ ++++ + G+P GV N+V+G G G L+ H +V ++FTGS TG +++ AA
Sbjct: 180 FAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAA 239
Query: 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 363
K + K V+LELGGKSP+IV +D D+ +AA+ + N GQ C AG+R V + D F
Sbjct: 240 K-DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAF 298
Query: 364 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA-- 421
+ + + VG+P + G Q GP I +QF+++ YI G++ GA+L GG
Sbjct: 299 LAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGL 358
Query: 422 -KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
KGY+ +PT+F V + M IA++EIFGPV S++ Y
Sbjct: 359 EKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYN 394
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516 | Back alignment and structure |
|---|
Score = 590 bits (1524), Expect = 0.0
Identities = 131/400 (32%), Positives = 202/400 (50%), Gaps = 15/400 (3%)
Query: 65 YTQLLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPR 123
+ L I G++VD+ + +L+P +V+ A+ + A+ AA KAF W
Sbjct: 37 HYPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWKD 92
Query: 124 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 183
+RS+++L+ A L+ R E+ A ++ GK + + A +V YYA A +
Sbjct: 93 WPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVE-ASADVAEAIDFIEYYARAALR 151
Query: 184 IQGLTAPADGP--YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
+ ++ + P+G I PWNFP+ +F + +A GNT++ K AE
Sbjct: 152 YRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAED 211
Query: 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
+ V ++ HEAG PPGV+N + G G GA L H + + FTGS G + +
Sbjct: 212 AVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEA 271
Query: 302 AAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVH 356
A + + K +E GGK+ IV E AD D AAE + + QGQ C A SR +
Sbjct: 272 AGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILT 331
Query: 357 ESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG 416
+ Y+ +E+ A + VG P + GP + +EQ K+L YI G + G +L GG
Sbjct: 332 QGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGG 389
Query: 417 ERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
+RL +GY+I PTVFT V IA++EIFGPV S+++ K
Sbjct: 390 KRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVK 429
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508 | Back alignment and structure |
|---|
Score = 561 bits (1447), Expect = 0.0
Identities = 140/397 (35%), Positives = 207/397 (52%), Gaps = 9/397 (2%)
Query: 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWP 122
+D T+ LI GQ+V+ S + ++P VI + DV+ A AA+KA W
Sbjct: 10 IDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQ--AEWA 67
Query: 123 RMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWAD 182
A ERS II R A+LLE H +EI ++G + A E+ + + + A +
Sbjct: 68 ATPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSK-ANLEITLAGNITKESASFPG 126
Query: 183 KIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
++ G +P++ P + GV G I PWNFPL + V PALA GN +V+K A
Sbjct: 127 RVHGRISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASD 186
Query: 242 TPLSALYVS-KLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
TP++ + ++ EAG+P GV++ V+G G G +H ++FTGST G+ V +
Sbjct: 187 TPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGE 246
Query: 301 LAAKS-NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
LA +K V LELGG +PF+V DAD+D AA+ A F +QGQ C + +R V +V
Sbjct: 247 LAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAV 306
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 419
+D+F+EK GDP G GP I+ Q + + I GA ++ G
Sbjct: 307 HDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI- 365
Query: 420 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
+G + P VF+ V DM IA++EIFGP+ S+LK
Sbjct: 366 --EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKAD 400
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505 | Back alignment and structure |
|---|
Score = 511 bits (1319), Expect = e-180
Identities = 133/397 (33%), Positives = 194/397 (48%), Gaps = 16/397 (4%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+L NG++V+S +G+ P +G + + E+VN A+ A+ A W
Sbjct: 12 ANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKI--WKIRP 69
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
+ER ++ +ADLLE + I L + KP + A EV T + R+ A A ++
Sbjct: 70 IHERVDLLYAWADLLEERKEIIGELIMHEVAKPKKS-AIGEVSRTADIIRHTADEALRLN 128
Query: 186 GLTAPADGPYHVQ------TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239
G T D EP+GV I P+N+P+ + A K+ PAL GNT+V K A
Sbjct: 129 GETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPA 188
Query: 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299
Q LS + + + L +AG P G++ +V+G G G L H +D + FTG TTTG+
Sbjct: 189 TQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGER-- 246
Query: 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
++ K+ + PV LELGGK P IV +DAD+ A F GQ C A R FV +SV
Sbjct: 247 -ISEKAKMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSV 305
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 419
DQ V L + VG P P ID + I I ++ GA L +G +R
Sbjct: 306 ADQLVANIKELVEQLTVGSPED-DADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR- 363
Query: 420 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
+G + PT+ V M +A +E FGPV I++ K
Sbjct: 364 --QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVK 398
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501 | Back alignment and structure |
|---|
Score = 510 bits (1315), Expect = e-179
Identities = 115/411 (27%), Positives = 171/411 (41%), Gaps = 18/411 (4%)
Query: 54 EDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAAR 113
E I V + G++ S G+ P I V E+V R +
Sbjct: 7 EGVIKEKGGVPVYPSYLAGEWGGS--GQEIEVKSPIDLATIAKVISPSREEVERTLDVLF 64
Query: 114 KAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRL 173
K M ER ++ + AD++ER+ D A + + GKP A EV
Sbjct: 65 KRGRW-SARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSA-AVGEVKAAVDR 122
Query: 174 FRYYAGWADKIQGLTAPADGPYHVQ-----TLHEPIGVAGQIIPWNFPLLMFAWKVGPAL 228
R KI G P D Y EP+GV I P+N+PL K+ +
Sbjct: 123 LRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSF 182
Query: 229 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 288
GN +V+K + PL A K L +AG PP + +++ G + + V ++F
Sbjct: 183 IYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKE-AEKIVADDRVAAVSF 241
Query: 289 TGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC 348
TGST G+ + +K +ELGG P IV EDAD+D AA+ ++ GQ C
Sbjct: 242 TGSTEVGER---VVKVGGVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCD 298
Query: 349 AGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDG 408
A VY + VE+ VGDP + GP I ++++ I V+
Sbjct: 299 AIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEK 358
Query: 409 GAKLETGGERLGAKGYYIKPTVFTG---VKDDMLIAKDEIFGPVQSILKYK 456
G ++ GG RLG Y++PT DM++ K E+F PV ++ K
Sbjct: 359 GGRVLAGGRRLG--PTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVK 407
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486 | Back alignment and structure |
|---|
Score = 503 bits (1298), Expect = e-177
Identities = 115/393 (29%), Positives = 195/393 (49%), Gaps = 18/393 (4%)
Query: 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
+ I+G++++ + ++P + +VI + E+ A+ A K + +
Sbjct: 2 MFIDGKWIN---REDMDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEV--MKNLPIT 56
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
+R I++ A ++ +E+A + D GKP +Q A+ EV + F+ A + + +
Sbjct: 57 KRYNILMNIAKQIKEKKEELAKILAIDAGKPIKQ-ARVEVERSIGTFKLAAFYVKEHRDE 115
Query: 188 TAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247
P+D + T EP+G+ G I P+NFPL + A K+ PA+A GN IV + + PL +
Sbjct: 116 VIPSDD-RLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCI 174
Query: 248 YVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303
++K++ A +P GV N+++G G G + + +V+ ++FTGS+ G+++ + A
Sbjct: 175 ELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG 234
Query: 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQF 363
K + LELGG +P IV +DAD++KA F GQ C + V ES+ D+F
Sbjct: 235 ---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKF 291
Query: 364 VEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 423
+E A VG+P GP I E E + K + +D G KL GG+R
Sbjct: 292 IEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DK 348
Query: 424 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
PT+ V D ++ K E F PV I++
Sbjct: 349 ALFYPTILE-VDRDNILCKTETFAPVIPIIRTN 380
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490 | Back alignment and structure |
|---|
Score = 502 bits (1294), Expect = e-176
Identities = 115/393 (29%), Positives = 174/393 (44%), Gaps = 8/393 (2%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+ I GQ++ G+T +LDP V+ +A V+ AV AAR+AF W R
Sbjct: 6 STHYIAGQWLA-GQGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPA--WARRP 62
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
+R +++ RFA L+ DE+A + + GKP + + TEV +
Sbjct: 63 LEQRIELLERFAATLKSRADELARVIGEETGKPLWE-SATEVTSMVNKVAISVQAFRERT 121
Query: 186 GLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLS 245
G + H+P GV P+NFP + + PAL GN +V K +E TP
Sbjct: 122 GEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKV 181
Query: 246 ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305
A K +AGLP GVLN+V G G G ALA+H +D L FTGS+ TG ++
Sbjct: 182 AELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQ 240
Query: 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY-DQFV 364
K + LE+GG +P +V E AD+D A + F + GQ C R V + + D +
Sbjct: 241 PQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALL 300
Query: 365 EKANALAMKRVVGDPF-KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 423
+ A++ VG + G I E +LK + GA+ +
Sbjct: 301 ARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGA 360
Query: 424 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
+ P + V +E FGP+ +++Y
Sbjct: 361 ALLTPGILD-VSAVAERPDEEFFGPLLQVIRYS 392
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534 | Back alignment and structure |
|---|
Score = 497 bits (1282), Expect = e-174
Identities = 92/417 (22%), Positives = 153/417 (36%), Gaps = 31/417 (7%)
Query: 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPR 123
+ + + GQ++ +G DP TG + V+ + A
Sbjct: 6 ELLKNHVAGQWIA-GTGAGITLTDPVTGVALVRVSSEGLDLARAFSFAREDGG--AALRA 62
Query: 124 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 183
+T +R+ + LL+ + A+ T ++G SA ++ YYA
Sbjct: 63 LTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSA-VDIDGGIFTLSYYAKLGAS 121
Query: 184 IQGLTAPADGP----------YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNT 233
+ + A DG L GVA I +NFP K PAL G
Sbjct: 122 LGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVP 181
Query: 234 IVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGST 292
+++K A T + + +AG LPPG L+I+ G ++ L D ++FTGS
Sbjct: 182 VIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTGSA 238
Query: 293 TTGKIVLQLAAKS-NLKPVTLELGGKSPFIVCEDADV-----DKAAELAHYALFFNQGQC 346
T + A + ++ + I+C DA D + + GQ
Sbjct: 239 DTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQK 298
Query: 347 CCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV 406
C A R FV E+ + +E A K VG+P ++ G + EQ+E +L I +
Sbjct: 299 CTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALR 358
Query: 407 DGGAKLETGGERL-----GAKGYYIKPTVF--TGVKDDMLIAKDEIFGPVQSILKYK 456
+ + P +F + L+ E+FGPV S+ Y+
Sbjct: 359 EEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYR 415
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479 | Back alignment and structure |
|---|
Score = 463 bits (1194), Expect = e-161
Identities = 136/393 (34%), Positives = 213/393 (54%), Gaps = 6/393 (1%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+ I+GQFV ++P T VI+ + +G+AED +A+ AA +A E W +
Sbjct: 7 HPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPE--WEALP 64
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A ER+ + + + + EI+AL + GK + A+ EV T Y A WA + +
Sbjct: 65 AIERASWLRKISAGIRERASEISALIVEEGGKIQQL-AEVEVAFTADYIDYMAEWARRYE 123
Query: 186 GLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G +D P ++ +GV I+PWNFP + A K+ PAL GNTIV+K +E TP
Sbjct: 124 GEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPN 183
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
+A+ +K++ E GLP GV N+V G G T G LA + +V ++ TGS + G+ ++ AA
Sbjct: 184 NAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAA- 242
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
N+ V LELGGK+P IV +DAD++ A + + N GQ C R +V + +YDQFV
Sbjct: 243 KNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFV 302
Query: 365 EKANALAMKRVVGDPF-KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 423
+ G+P + I GP I++ E++ + + V+ GA++ GG+ + KG
Sbjct: 303 NRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKG 362
Query: 424 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
YY PT+ V+ +M I +E FGPV ++ +
Sbjct: 363 YYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFD 395
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475 | Back alignment and structure |
|---|
Score = 447 bits (1153), Expect = e-155
Identities = 120/397 (30%), Positives = 191/397 (48%), Gaps = 18/397 (4%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+ +NG++ S +P +G + V E+V+ ++A+KA W ++
Sbjct: 5 YKNYVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPA--WRALS 60
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
ER+ + + AD+L R ++I A+ + + K + +SA +EV T + Y A +++
Sbjct: 61 YIERAAYLHKVADILMRDKEKIGAILSKEVAKGY-KSAVSEVVRTAEIINYAAEEGLRME 119
Query: 186 GLTAPADGPYHVQ------TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTA 239
G EP+G+ I P+N+P+ + K+ PAL GN I K
Sbjct: 120 GEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPP 179
Query: 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299
Q +S L +++ EAGLP GV N ++G G G + H V+ + FTGST G+ +
Sbjct: 180 TQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIG 239
Query: 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
++A ++P+ LELGGK IV EDAD++ A+ F GQ C A R V ESV
Sbjct: 240 KMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESV 296
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 419
D+ VEK + +G+P P ID++ + + I D GA T +R
Sbjct: 297 ADELVEKIREKVLALTIGNPED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR- 354
Query: 420 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
+G I P +F V DM +A +E FGPV I++
Sbjct: 355 --EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVT 389
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485 | Back alignment and structure |
|---|
Score = 436 bits (1123), Expect = e-150
Identities = 121/396 (30%), Positives = 194/396 (48%), Gaps = 10/396 (2%)
Query: 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPR 123
+ ING++ SG+T L+P VIT + + + A A+KA E W +
Sbjct: 5 TLNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKE--WAK 62
Query: 124 MTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK 183
T +R ++ + L + D+I + + G + + E+ T + + +
Sbjct: 63 STTEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIK-STIELEQTIAILDEAMTYTGE 121
Query: 184 IQGL-TAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
+ G+ P+D + P+GV I P+NFP+ + + PA+A GN++V K Q
Sbjct: 122 LGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQ 181
Query: 242 TPLSA-LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
T +S ++K AGLP GVLN++ G + ++ ++FTGST G+ + +
Sbjct: 182 TAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGE 241
Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
+A K + LELGG +PF V DADVD+A + A + F +QGQ C +R VH+ VY
Sbjct: 242 IAG-RAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVY 300
Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 420
D+FVEK A + GD GP I+ Q EK L+ I G +L G+R+
Sbjct: 301 DEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKRV- 359
Query: 421 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
G + P VF G ++ IA+ E+F P+ +I+K
Sbjct: 360 --GNVLTPYVFVGADNNSKIAQTELFAPIATIIKAG 393
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500 | Back alignment and structure |
|---|
Score = 430 bits (1107), Expect = e-148
Identities = 108/396 (27%), Positives = 177/396 (44%), Gaps = 12/396 (3%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+ + NG + G+ T P + I V + D V AR+A+ W +
Sbjct: 24 NEGVYNGSWGGR--GEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKI--WADIP 79
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A +R +I+ + D L + +L + + GK EV + Y G + I
Sbjct: 80 APKRGEIVRQIGDALREKIQVLGSLVSLEMGKIL-VEGVGEVQEYVDICDYAVGLSRMIG 138
Query: 186 GLTAPADGPYH-VQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G P++ H + P+G+ G I +NFP+ ++ W A+ CGN + K A T L
Sbjct: 139 GPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSL 198
Query: 245 SALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300
++ V+K++ + LP + ++ G G G A+A V+ L+FTGST GK V
Sbjct: 199 ISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQVGL 257
Query: 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVY 360
+ + LELGG + I EDAD+ A +A GQ C R F+HES++
Sbjct: 258 MVQER-FGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIH 316
Query: 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 420
D+ V + + VG+P+ + GP + L + G + GG+ +
Sbjct: 317 DEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMD 376
Query: 421 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
G Y++PT+ TG+ D IA E F P+ + K++
Sbjct: 377 RPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQ 412
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026 | Back alignment and structure |
|---|
Score = 440 bits (1134), Expect = e-145
Identities = 122/395 (30%), Positives = 196/395 (49%), Gaps = 13/395 (3%)
Query: 69 LINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAY 127
ING+ V + PT++P + +V+ + + +V A++AA+ AF W
Sbjct: 535 FINGKEVRT--NDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPA--WRDTDPR 590
Query: 128 ERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL 187
R++ +L+ A + E++A + + GK ++Q A +V YYA ++
Sbjct: 591 TRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQ-AYADVTEAIDFLEYYAREMIRLGQP 649
Query: 188 TAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 246
P +EP GVA I PWNFPL + A+ GN +V K + T +
Sbjct: 650 QRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIG 709
Query: 247 LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK-- 304
++ +L EAGLP GV N G G G L H ++ +AFTGS TG +++ AAK
Sbjct: 710 WHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVH 769
Query: 305 ---SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
+N+K + E+GGK+ I+ +DAD+D+A Y+ F QGQ C A SR V ++VYD
Sbjct: 770 PGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYD 829
Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 421
+F+E+ ++A VG G D + + I +Y G G L
Sbjct: 830 KFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLY-ESPVPAG 888
Query: 422 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
+GY++ T+ G+K + IA++EIFGPV ++++ K
Sbjct: 889 EGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAK 923
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497 | Back alignment and structure |
|---|
Score = 415 bits (1069), Expect = e-142
Identities = 139/396 (35%), Positives = 198/396 (50%), Gaps = 9/396 (2%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
I GQ+V S T L P TG VI + G D A+ A+ A W ++T
Sbjct: 13 KVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKA--WAKLT 70
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A R ++ FA+ + + +A + + GK A+ EV +T Y A I+
Sbjct: 71 ARTRQNMLRTFANKIRENKHILAPMLVAEQGKLLSV-AEMEVDVTATFIDYGCDNALTIE 129
Query: 186 GLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G P+D + P GV I WNFPL + K+GPAL GNT+VLK ++TPL
Sbjct: 130 GDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPL 189
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
+ + ++ EAGLP GVLN+++G G G L + TGST GK + + +A
Sbjct: 190 ATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSA- 248
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
+ PV LELGGK+P +V +DAD+DKAAE A + F N GQ C R +VH SVYD+F+
Sbjct: 249 EYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFM 308
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL----G 420
K L VGDP Q GP+ + + + I + + GA + TGG+
Sbjct: 309 AKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGF 368
Query: 421 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
G + +PTV VK D ++ +E FGP+ I+K
Sbjct: 369 EGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVS 404
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481 | Back alignment and structure |
|---|
Score = 409 bits (1053), Expect = e-140
Identities = 145/392 (36%), Positives = 222/392 (56%), Gaps = 5/392 (1%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
Q LING+++D+ +G+ +P GD + V + A++ A+ AA +A W +T
Sbjct: 10 QQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPA--WRALT 67
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A ER+ I+ + +L+ H D++A L T + GKP + A+ E+ ++A +I
Sbjct: 68 AKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAE-AKGEISYAASFIEWFAEEGKRIY 126
Query: 186 GLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G T P + + +PIGV I PWNFP M K GPALA G T+VLK A QTP
Sbjct: 127 GDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPF 186
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
SAL +++L AG+P GV N+V+G G L S+ V KL+FTGST G+ +++ A
Sbjct: 187 SALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCA- 245
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
++K V+LELGG +PFIV +DAD+DKA E A + F N GQ C +R +V + VYD+F
Sbjct: 246 KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFA 305
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 424
EK K +GD G+ GP ID + K+ ++I ++ GA++ GG+ G
Sbjct: 306 EKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGN 365
Query: 425 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
+ +PT+ V + ++K+E FGP+ + ++K
Sbjct: 366 FFQPTILVDVPANAKVSKEETFGPLAPLFRFK 397
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484 | Back alignment and structure |
|---|
Score = 409 bits (1054), Expect = e-140
Identities = 154/392 (39%), Positives = 221/392 (56%), Gaps = 5/392 (1%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
Q I G++ + S TF DP TG+ + V + A + RA+ AA+ A+ W T
Sbjct: 13 HQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAG--WRMKT 70
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A ER+ I+ R+ DL+ ++D++A + T + GKP + A+ E+ ++A ++
Sbjct: 71 AKERAAILRRWFDLVIANSDDLALILTTEQGKPLAE-AKGEIAYAASFIEWFAEEGKRVA 129
Query: 186 GLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G T P + + EPIGV I PWNFP M A KVGPALA G IV+K AE TP
Sbjct: 130 GDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPF 189
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
SAL ++ L AG+P GVL++V G G + S+ V KL+FTGST G++++ +A
Sbjct: 190 SALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSA- 248
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
+K +TLELGG +PFIV +DAD+D A E A + + N GQ C +R FVHE VYD F
Sbjct: 249 PTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFA 308
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 424
+K A K VG + G GP I+ +K+ +I + GA L TGG+R
Sbjct: 309 DKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHG 368
Query: 425 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
+ +PTV TGVK DM +AK+E FGP+ + ++
Sbjct: 369 FFEPTVLTGVKPDMDVAKEETFGPLAPLFRFA 400
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504 | Back alignment and structure |
|---|
Score = 408 bits (1050), Expect = e-139
Identities = 149/392 (38%), Positives = 223/392 (56%), Gaps = 7/392 (1%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+Q L+NG+++D+A G T +P G VI V + A+ A+ KA W T
Sbjct: 33 SQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSG--WAAKT 90
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A ER+ I+ ++ DL+ + D+IA + T + GKP + A+ EV ++A A ++
Sbjct: 91 AKERAGILRKWFDLIIANADDIALIMTSEQGKPLAE-ARGEVLYAASFIEWFAEEAKRVY 149
Query: 186 GLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G T PA + + +P+GV I PWNFP M K PALA G T++++ A+ TPL
Sbjct: 150 GDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPL 209
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
+AL + L +AG+P GVL IV+G GA L S+ V KL+FTGST G++++ A
Sbjct: 210 TALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCA- 268
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
+K ++LELGG +PFIV +DAD+D A + A + + N GQ C +R +V VYD+F
Sbjct: 269 PTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFA 328
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY 424
EK A + VG+ + G+ GP I+ + K+ +I V GAKL TGG+ LG G
Sbjct: 329 EKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKELG--GL 386
Query: 425 YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
+ +P + TGV DML+AK+E FGP+ + +
Sbjct: 387 FFEPGILTGVTSDMLVAKEETFGPLAPLFAFD 418
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506 | Back alignment and structure |
|---|
Score = 406 bits (1046), Expect = e-138
Identities = 135/393 (34%), Positives = 197/393 (50%), Gaps = 6/393 (1%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
I G++ DSA G TF +P TG VI V EDV AV A + A
Sbjct: 12 LTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRL--TNPWP 69
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
R K + D L+ + +EI + ++GKP+++ AQ EV F Y A +
Sbjct: 70 IETRRKWLEDIRDGLKENREEIGRILCMEHGKPWKE-AQGEVDYAAGFFDYCAKHISALD 128
Query: 186 GLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
T P + P+GV G I+PWNFP+ M A K+ ALA G V+K A +TPL
Sbjct: 129 SHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPL 188
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
+ + ++ + LP G++N+V G G L H +V L+FTGST G+ ++ A
Sbjct: 189 TMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTA- 247
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
+K + LELGG +PFIV +DAD++ AA+ F GQ C +R FVHE V D F
Sbjct: 248 EQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFG 307
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA-KG 423
+K K VGD GI GP I+ + F+K+ ++++ +D GA L G + G
Sbjct: 308 QKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDG 367
Query: 424 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
+ PTV GV +M ++E FGP+ + ++
Sbjct: 368 LFFPPTVVQGVDREMCCYQEETFGPLVPMALFR 400
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487 | Back alignment and structure |
|---|
Score = 395 bits (1018), Expect = e-134
Identities = 141/396 (35%), Positives = 222/396 (56%), Gaps = 11/396 (2%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
T + G+++ + TFP DP +G + VA+ + AV AA +AF W ++
Sbjct: 13 TDSFVGGRWLPA--AATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCR--WREVS 68
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
A ERS ++ ++ +L+ ++ D++A + T ++GKP ++ A E+ + +++ A ++
Sbjct: 69 AKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKE-AHGEILYSAFFLEWFSEEARRVY 127
Query: 186 GLTAPADGPYH-VQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G L +PIGVA I PWNFP M KVG ALA G T+V+K AE TP
Sbjct: 128 GDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPF 187
Query: 245 SALYVSKLLHEAGLPPGVLNIV---SGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
SAL +++L +AG+P GV N++ G A+ + V K++FTGSTTTGKI+L
Sbjct: 188 SALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHH 247
Query: 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
AA +++K V++ELGG +PFIV + A+VD+A A + F N GQ C ++ V ++D
Sbjct: 248 AA-NSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHD 306
Query: 362 QFVEK-ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 420
FV+ A A+ VG+ F+ G QGP I+ + EK+ K + V GA + TGG+R
Sbjct: 307 AFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQ 366
Query: 421 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
+ +PT+ V DML +E FGP+ ++K+
Sbjct: 367 LGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFD 402
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510 | Back alignment and structure |
|---|
Score = 380 bits (977), Expect = e-128
Identities = 84/405 (20%), Positives = 146/405 (36%), Gaps = 39/405 (9%)
Query: 75 VDSASGKTFPTLDPRTGDVI-THVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKII 133
++ + F + TG+ + +VN+A +AA K + + R+ +R+ ++
Sbjct: 1 MNPQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARD--FRRLNNSKRASLL 58
Query: 134 LRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADG 193
A LE +D+I A + P + E+ T R +A + A D
Sbjct: 59 RTIASELEARSDDIIARAHLETALPEVR-LTGEIARTANQLRLFADVVNSGSYHQAILDT 117
Query: 194 P---------YHVQTLHEPIGVAGQIIPWNFPLLMFA--WKVGPALACGNTIVLKTAEQT 242
P ++ +G NFPL A ALA G +++K
Sbjct: 118 PNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAH 177
Query: 243 PLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 298
P ++ V++ + +A LP + ++ G G AL SH E+ + FTGS G+ +
Sbjct: 178 PGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRAL 237
Query: 299 LQLAAKS-NLKPVTLELGGKSPFIVCEDADVDKA--AELAHYALFFNQGQCCCAGSRTFV 355
LA + P ELG +P + A KA A+ ++ GQ C F
Sbjct: 238 FNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFA 297
Query: 356 HES-VYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLET 414
+ F+E A +L P I + + G D G +
Sbjct: 298 LNTPETQAFIETAQSL------IRQQSPSTLLTPGIRDSYQS---QVVSRGSDDGIDVTF 348
Query: 415 GGERLGAKGYYIKPTVFTGVKDDML---IAKDEIFGPVQSILKYK 456
+ +F ++ ++EIFGP I+ +
Sbjct: 349 SQAE----SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCE 389
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462 | Back alignment and structure |
|---|
Score = 364 bits (937), Expect = e-123
Identities = 109/378 (28%), Positives = 170/378 (44%), Gaps = 5/378 (1%)
Query: 79 SGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFAD 138
+ +++P TG + + A+++ A+S A F + W + +R++ +
Sbjct: 5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKK--WKMTSVAQRAQTLRDIGQ 62
Query: 139 LLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQ 198
L H +E+A T + GKP +Q A+ EV + L +YA +
Sbjct: 63 ALRAHAEEMAQCITREMGKPIKQ-ARAEVTKSAALCDWYAEHGPAMLNPEPTLVENQQAV 121
Query: 199 TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGL 258
+ P+GV I+PWNFPL P L GN+ +LK A A ++++L EAG
Sbjct: 122 IEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIARILAEAGT 181
Query: 259 PPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS 318
P GV V+ + + + TGS G + A LK LELGG
Sbjct: 182 PAGVYGWVNANNEGVSQMIN-DPRIAAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGGSD 239
Query: 319 PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 378
PFIV DAD++ A + A + N GQ C A R V E + F ++ A A +GD
Sbjct: 240 PFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGD 299
Query: 379 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDM 438
P GP + +++ + +++ V GA+L GGE++ +G Y TV V DM
Sbjct: 300 PLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDM 359
Query: 439 LIAKDEIFGPVQSILKYK 456
+ E+FGPV +I K
Sbjct: 360 TAFRQELFGPVAAITVAK 377
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484 | Back alignment and structure |
|---|
Score = 363 bits (935), Expect = e-122
Identities = 100/375 (26%), Positives = 168/375 (44%), Gaps = 5/375 (1%)
Query: 82 TFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE 141
+ +++P T + ++ ++ A++ A + + W R++I+ A+ L+
Sbjct: 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKK--WRHEEPASRAEILHDIANALK 62
Query: 142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLH 201
H DE+A + T + GK + ++ EV + + YYA ++ T + L
Sbjct: 63 EHEDELAKMMTLEMGKLLSE-SKEEVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLK 121
Query: 202 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPG 261
+ GV PWNFPL P GN I+LK A P SA +K++ AG P G
Sbjct: 122 QSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEG 181
Query: 262 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321
L + +A + +A TGS G V + A K NLK T+ELGG FI
Sbjct: 182 SLINLYPSYDQLADIIA-DPRIQGVALTGSERGGSAVAEAAGK-NLKKSTMELGGNDAFI 239
Query: 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381
V +DAD + + A +N GQ C + R V +S YD+ + + + GDP +
Sbjct: 240 VLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLE 299
Query: 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIA 441
P + EK+ ++ +D GAK+ + +KG + +PT+ T + D +
Sbjct: 300 ADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVF 359
Query: 442 KDEIFGPVQSILKYK 456
E+FGP+ + +
Sbjct: 360 DKEVFGPIAEVFVVE 374
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452 | Back alignment and structure |
|---|
Score = 337 bits (867), Expect = e-112
Identities = 65/364 (17%), Positives = 127/364 (34%), Gaps = 20/364 (5%)
Query: 97 VAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNG 156
+ +++ ++ +KA +E + + + KI + + +A ++G
Sbjct: 1 MPVTNMAELDAMIARVKKAQEE--FATYSQEQVDKIFRAASLAANQARIPLAQQAVEESG 58
Query: 157 KPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFP 216
+ + F Y ++ G+ D T+ EP+G+ I+P P
Sbjct: 59 MGIVE-DKVIKNHFASEFIYNKYKDEQTCGIL-EEDDNLGTMTIAEPVGIICGIVPTTNP 116
Query: 217 LLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPT 272
+K +L N I+ + S +KL+ +A G P ++ +
Sbjct: 117 TSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVE 176
Query: 273 AGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAA 332
AL H ++ + TG K AA S+ KP G P ++ E AD+ +A
Sbjct: 177 LSNALMKHDDIALILATGGPGMVK-----AAYSSGKPAIGVGAGNVPVVIDETADIKRAV 231
Query: 333 ELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDS 392
+ F+ G C + V + VYD+ E+ + + +++ ID
Sbjct: 232 ASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASHKAHVLSKTDAD-KVRKVLLIDG 290
Query: 393 EQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSI 452
KI+ + + E G ++ A + V D A E P +
Sbjct: 291 ALNAKIVGQPATAI-----AEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGM 344
Query: 453 LKYK 456
+
Sbjct: 345 FRAD 348
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 322 bits (826), Expect = e-105
Identities = 95/416 (22%), Positives = 149/416 (35%), Gaps = 46/416 (11%)
Query: 66 TQLLINGQFVDSA-SGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRM 124
+ L+ G+++D A + + P P A G E VNRA AA +AF +
Sbjct: 30 GKHLVAGEWLDGAGTFASAPAHGPAHD-----FAVGTVELVNRACEAAEEAFWT--YGYS 82
Query: 125 TAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWA--- 181
+ ER+ + AD +E + I + + + G P + E TT R +A
Sbjct: 83 SRKERAAFLRAIADEIEARAEAITEIGSQETGLPEAR-LNGERGRTTGQLRLFADHIEKG 141
Query: 182 -------DKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLM--FAWKVGPALACGN 232
D PA ++ + P+G NFPL ALA G
Sbjct: 142 DYLDRRVDAAMPERQPAPRQ-EIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGC 200
Query: 233 TIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAF 288
+V+K P + V++ + A G+ PGV +++ G G AL H + + F
Sbjct: 201 PVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGF 260
Query: 289 TGSTTTGKIVLQLAAKS-NLKPVTLELGGKSPFIVCEDADVDKAAELAH---YALFFNQG 344
TGS G+ + L A P ELG +P + +A +A L +L G
Sbjct: 261 TGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAG 320
Query: 345 QCCCAGSRTFVHESV-YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIR 403
Q C V E D+F A K GI + + +F
Sbjct: 321 QFCTNPGIAVVIEGADADRFTTAAVEALAKVAPQTMLTDGIAKAYRDGQARFAT------ 374
Query: 404 SGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDML---IAKDEIFGPVQSILKYK 456
K E + G P +F L +E+FGP+ +++
Sbjct: 375 ---RNAVKPLLATE---SSGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVG 424
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001 | Back alignment and structure |
|---|
Score = 325 bits (835), Expect = e-102
Identities = 121/419 (28%), Positives = 184/419 (43%), Gaps = 17/419 (4%)
Query: 45 TASSAAAAAEDPITPPVKVDYTQLLINGQFVD---SASGKTFPTLDPRTGDVITHVAEGE 101
AAA I P + N + V+ + T + +A+
Sbjct: 490 AIVRPQAAAHPRIPLPCD-LFAPERRNSRGVEFGARTALDQLLTDVKAETGDLKPIADAT 548
Query: 102 AEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQ 161
+ + AV+AAR F W R A R+ + + A LLE + AL + GK +
Sbjct: 549 PDQAHAAVAAARAGFAG--WSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDD 606
Query: 162 SAQTEVPMTTRLFRYYAGWADKIQGLTAPADGP--YHVQTLHEPIGVAGQIIPWNFPLLM 219
A +E+ RYYA K+ G GP GV I PWNFPL +
Sbjct: 607 -ALSELREAADFCRYYAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAI 665
Query: 220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS 279
F +V AL GN++V K AEQTP A LLHEAG+P L +V+G G GAAL +
Sbjct: 666 FLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDGR-IGAALTA 724
Query: 280 HMEVDKLAFTGSTTTGKIVLQLAAKSN--LKPVTLELGGKSPFIVCEDADVDKAAELAHY 337
H ++ + FTGST + + + A + + P+ E GG + I A ++ A+
Sbjct: 725 HPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVT 784
Query: 338 ALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEK 397
+ F + GQ C A FV E V D+ +E A + +GDP GP ID E ++
Sbjct: 785 SAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQR 844
Query: 398 ILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
+ +I A+L G +G ++ P +F + +E+FGP+ +++Y+
Sbjct: 845 LDAHIARM-KTEARLHFAGPA--PEGCFVAPHIFELTEAG--QLTEEVFGPILHVVRYR 898
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486 | Back alignment and structure |
|---|
Score = 303 bits (778), Expect = 1e-98
Identities = 123/391 (31%), Positives = 197/391 (50%), Gaps = 7/391 (1%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+ ING++V+S + + ++P T +V+ V ED++ A A +AF W ++
Sbjct: 6 LKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKT--WSKVA 63
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
R++I+ F LL +H +E+A L T +NGK ++ A EV + AG +
Sbjct: 64 VPRRARILFNFQQLLSQHKEELAHLITIENGKNTKE-ALGEVGRGIENVEFAAGAPSLMM 122
Query: 186 GLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
G + + PIGV G I P+NFP+++ W A+A GNT +LK +E+TPL
Sbjct: 123 GDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPL 182
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
+ +L +AGLP GV N+V G + H E+ ++F GS G+ V + ++
Sbjct: 183 LTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSE 241
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
NLK V G K+ IV DA+++ A F + G+ C A + V E + D+F+
Sbjct: 242 -NLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFM 300
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKG 423
K +G+ G+ GP I + ++ L YI G++ GA+L G G
Sbjct: 301 AKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDG 360
Query: 424 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 454
Y++ PT+F V +M I KDEIF PV S+++
Sbjct: 361 YFVGPTIFDNVTTEMTIWKDEIFAPVLSVIR 391
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521 | Back alignment and structure |
|---|
Score = 297 bits (763), Expect = 6e-96
Identities = 117/414 (28%), Positives = 200/414 (48%), Gaps = 11/414 (2%)
Query: 47 SSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVN 106
SS + + + I+G+ V SG+ +P TG+V VA D+
Sbjct: 8 SSGVDLGTENLYFQSMMYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLA 67
Query: 107 RAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTE 166
AV +A+ A + W R+++ ++F LL + +E+A + + ++GK + A+ +
Sbjct: 68 AAVESAKAAQPK--WAATNPQRRARVFMKFVQLLNDNMNELAEMLSREHGKTIDD-AKGD 124
Query: 167 VPMTTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225
+ + + G + GP + ++ +P+G+ I P+NFP ++ W
Sbjct: 125 IVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFA 184
Query: 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDK 285
PA+ACGN +LK +E+ P + +++L+ EAGLP G+LN+V+G A A+ +H ++
Sbjct: 185 PAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNG-DKGAVDAILTHPDIAA 243
Query: 286 LAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQ 345
++F GST + V AA N K G K+ I+ DAD+D+AA A + + G+
Sbjct: 244 VSFVGSTPIARYVYGTAAM-NGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGE 302
Query: 346 CCCAGSRT-FVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRS 404
C A S V E ++ ++K + +G GP + E ++I I S
Sbjct: 303 RCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDS 362
Query: 405 GVDGGAKLETGGERL----GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 454
G++ GAKL G G++I +F V DM I K EIFGPV S+++
Sbjct: 363 GIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVR 416
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563 | Back alignment and structure |
|---|
Score = 279 bits (716), Expect = 2e-88
Identities = 100/399 (25%), Positives = 164/399 (41%), Gaps = 15/399 (3%)
Query: 68 LLINGQFVDSASGKTFPTLDP-RTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
++ + V + L P + + +NRA+ AA A E W
Sbjct: 66 CVVGDEEVWT--SDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKE--WDLKPM 121
Query: 127 YERSKIILRFADLLE-RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI- 184
+R+++ L+ AD+L E+ A GK Q+ FR+ A +A ++
Sbjct: 122 ADRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELE 181
Query: 185 QGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
+ G I P+NF + G GN ++ K ++ L
Sbjct: 182 GEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAI-GGNLAGAPALMGNVVLWKPSDTAML 240
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
++ V ++L EAGLPP ++ V GPT G + S + + FTGS T K + + A+
Sbjct: 241 ASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQ 300
Query: 305 S-----NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV 359
+ + E GGK+ V ADVD + F GQ C A SR +V +S+
Sbjct: 301 NLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSL 360
Query: 360 YDQFVEKANALAMKRVVGDPFKG-GIQQGPQIDSEQFEKILKYIRSG-VDGGAKLETGGE 417
+ Q + + VGDP + G ID++ F +I K++ + GG+
Sbjct: 361 WPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQ 420
Query: 418 RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
+ GYY++P + I K+EIFGPV ++ Y
Sbjct: 421 CNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYP 459
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464 | Back alignment and structure |
|---|
Score = 261 bits (668), Expect = 2e-82
Identities = 57/367 (15%), Positives = 122/367 (33%), Gaps = 38/367 (10%)
Query: 103 EDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162
++V + +A KA E M+ + I+ AD +++A + + G Q
Sbjct: 12 QEVRNLIESANKAQKE--LAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQD 69
Query: 163 AQTEVPMTTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNFPLLMFA 221
+ ++ + + ++ + + V + P+GV +IP P
Sbjct: 70 KVIKNVFASK---HVYNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVI 126
Query: 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHE----AGLPPGVLNIVSGYGPTAGAAL 277
+K ++ GN+IV + L +++ E AG P G ++ ++ L
Sbjct: 127 YKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQGTDQL 186
Query: 278 ASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHY 337
H + + TG + K AA S+ P G P + A++ +A +
Sbjct: 187 MKHKDTAVILATGGSAMVK-----AAYSSGTPAIGVGPGNGPAFIERSANIPRAVKHILD 241
Query: 338 ALFFNQGQCCCAGSRTFVHESVYDQFVEK--------ANALAMKRVVGDPFKGGIQQGPQ 389
+ F+ G C + V + + + + ++ + P
Sbjct: 242 SKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPA 301
Query: 390 IDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPV 449
I + + I V A++ E T V + ++ E P+
Sbjct: 302 IVGKSVQHIANLAGLTVPADARVLIAEE--------------TKVGAKIPYSR-EKLAPI 346
Query: 450 QSILKYK 456
+ +
Sbjct: 347 LAFYTAE 353
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469 | Back alignment and structure |
|---|
Score = 222 bits (567), Expect = 2e-67
Identities = 103/364 (28%), Positives = 157/364 (43%), Gaps = 29/364 (7%)
Query: 103 EDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI-AALETWDNGKPFEQ 161
++ AV AR AF G R + + L++ E+ AL D K
Sbjct: 18 SKISEAVKRARAAFSSGRTR--PLQFRIQQLEALQRLIQEQEQELVGALAA-DLHKNEWN 74
Query: 162 SAQTEVPMTTRLFRYY----AGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPL 217
+ EV Y WA P + EP+GV I WN+P
Sbjct: 75 AYYEEVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPF 134
Query: 218 -LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAA 276
L VG A+A GN +VLK +E + A ++ ++ + L + +++G G
Sbjct: 135 NLTIQPMVG-AIAAGNAVVLKPSELSENMASLLATIIPQY-LDKDLYPVING-GVPETTE 191
Query: 277 LASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAH 336
L D + +TGST GKI++ AAK +L PVTLELGGKSP V ++ D+D A
Sbjct: 192 LLKE-RFDHILYTGSTGVGKIIMTAAAK-HLTPVTLELGGKSPCYVDKNCDLDVACRRIA 249
Query: 337 YALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQ----IDS 392
+ F N GQ C A S+ +Q VE +K+ + + + ++ I +
Sbjct: 250 WGKFMNSGQTCVAPDYILCDPSIQNQIVE-----KLKKSLKEFYGEDAKKSRDYGRIISA 304
Query: 393 EQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSI 452
F++++ I G K+ GG A YI PT+ T V + ++EIFGPV I
Sbjct: 305 RHFQRVMGLIE-----GQKVAYGGTG-DAATRYIAPTILTDVDPQSPVMQEEIFGPVLPI 358
Query: 453 LKYK 456
+ +
Sbjct: 359 VCVR 362
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457 | Back alignment and structure |
|---|
Score = 204 bits (520), Expect = 7e-61
Identities = 94/371 (25%), Positives = 158/371 (42%), Gaps = 23/371 (6%)
Query: 92 DVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI-AAL 150
D H+ ++ SA + F R + + R + + + + + +AL
Sbjct: 17 DDDKHMNYLSPAKIDSLFSAQKAYFATRATA--DVGFRKQSLERLKEAVINNKEALYSAL 74
Query: 151 ETWDNGKPFEQSAQTEVPMTTRLFRYY----AGWADKIQGLTAPADGPYHVQTLHEPIGV 206
D GKP + E+ + W + + P + EP GV
Sbjct: 75 AE-DLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGV 133
Query: 207 AGQIIPWNFPL-LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNI 265
I P+N+P+ L +G A+ GNT ++K +E TP ++ + K++ EA P + +
Sbjct: 134 TYIIGPFNYPVNLTLTPLIG-AIIGGNTCIIKPSETTPETSAVIEKIIAEA-FAPEYVAV 191
Query: 266 VSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCED 325
+ G G + L S D + FTGS GK+V+Q AAK +L PV LELGGK P IV D
Sbjct: 192 IQG-GRDENSHLLSL-PFDFIFFTGSPNVGKVVMQAAAK-HLTPVVLELGGKCPLIVLPD 248
Query: 326 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 385
AD+D+ + F N GQ A +VH SV D +E + V
Sbjct: 249 ADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLE-----RLVERVKTELPEINS 303
Query: 386 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEI 445
G + Q ++++ + ++ G + + TV GV+ + + +E+
Sbjct: 304 TGKLVTERQVQRLVSLLE---ATQGQVLVGSQA-DVSKRALSATVVDGVEWNDPLMSEEL 359
Query: 446 FGPVQSILKYK 456
FGP+ +L++
Sbjct: 360 FGPILPVLEFD 370
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 456 | |||
| 2wme_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 100.0 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 100.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 100.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 100.0 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 100.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 100.0 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 100.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 100.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 100.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 100.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 100.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 100.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 100.0 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 100.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 100.0 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 100.0 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 100.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 100.0 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 100.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 100.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 100.0 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 100.0 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 100.0 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 100.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 100.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 100.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 100.0 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 100.0 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 100.0 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 100.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 100.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 100.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 100.0 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 100.0 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 100.0 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 100.0 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 100.0 | |
| 4h7n_A | 474 | Aldehyde dehydrogenase; structural genomics, PSI-b | 100.0 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 100.0 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 100.0 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 100.0 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 100.0 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 100.0 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 100.0 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 100.0 | |
| 2h5g_A | 463 | Delta 1-pyrroline-5-carboxylate synthetase; dehydr | 100.0 | |
| 1vlu_A | 468 | Gamma-glutamyl phosphate reductase; YOR323C, struc | 100.0 | |
| 4ghk_A | 444 | Gamma-glutamyl phosphate reductase; structural gen | 100.0 | |
| 1o20_A | 427 | Gamma-glutamyl phosphate reductase; TM0293, struct | 100.0 | |
| 4gic_A | 423 | HDH, histidinol dehydrogenase; protein structure i | 87.61 |
| >2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-92 Score=735.44 Aligned_cols=392 Identities=43% Similarity=0.740 Sum_probs=375.6
Q ss_pred CCccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHh
Q 012802 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (456)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~ 142 (456)
+.+.++||||+|+++.++++++++||+||++|++++.++.+|+++|+++|++||. .|++++..+|.++|+++++.|++
T Consensus 4 ~~~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~~L~~~a~~l~~ 81 (490)
T 2wme_A 4 FEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQK--VWAAMTAMQRSRILRRAVDILRE 81 (490)
T ss_dssp SCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHH
Confidence 3456899999999988899999999999999999999999999999999999999 99999999999999999999999
Q ss_pred cHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHH
Q 012802 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (456)
Q Consensus 143 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (456)
++++|++++++|+|||+.+++..|+..+++.++||+++++++.+...+...+...+++++|+|||++|+|||||+.+.++
T Consensus 82 ~~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~ 161 (490)
T 2wme_A 82 RNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALW 161 (490)
T ss_dssp THHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCccccccCCcceeEEecceeEEEEeccccCcchhhhh
Confidence 99999999999999999998876799999999999999998887776666677889999999999999999999999999
Q ss_pred HHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHH
Q 012802 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (456)
Q Consensus 223 ~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~a 302 (456)
++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+||+|+||||+.+|+.|++.+
T Consensus 162 ~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~ 241 (490)
T 2wme_A 162 KSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASA 241 (490)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred hHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999998889999999999999999999999999998766
Q ss_pred hhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCC
Q 012802 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 382 (456)
Q Consensus 303 a~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~ 382 (456)
+.+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+|+
T Consensus 242 a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~ 321 (490)
T 2wme_A 242 SSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDE 321 (490)
T ss_dssp HHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTST
T ss_pred hccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCccc
Confidence 55589999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 383 ~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++++||+++..+++++.++|++++++|+++++||.+.. .+|+|++||||.+++++|++++||+||||++|++|+
T Consensus 322 ~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 399 (490)
T 2wme_A 322 NTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYD 399 (490)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred cCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeC
Confidence 99999999999999999999999999999999998643 469999999999999999999999999999999996
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-88 Score=703.86 Aligned_cols=388 Identities=39% Similarity=0.640 Sum_probs=371.7
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 012802 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (456)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (456)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||. .|+.++..+|.++|+++++.|++++
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 89 (484)
T 3ifg_A 12 RHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWA--GWRMKTAKERAAILRRWFDLVIANS 89 (484)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 45789999999877889999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCC-CCceEEEEEccceEEEEEcCcChhHHHHHHH
Q 012802 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (456)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (456)
++|++++++|+|||+.+++. |+..+++.++||+.+.++..+...+.. .+...+++++|+|||++|+|||||+.+.+++
T Consensus 90 ~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 168 (484)
T 3ifg_A 90 DDLALILTTEQGKPLAEAKG-EIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARK 168 (484)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHHH
Confidence 99999999999999999874 999999999999999888766555433 4567889999999999999999999999999
Q ss_pred HhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHh
Q 012802 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (456)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa 303 (456)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++..|.+||+||+|+||||+.+|+.|++.++
T Consensus 169 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa 248 (484)
T 3ifg_A 169 VGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSA 248 (484)
T ss_dssp HHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTG
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999998
Q ss_pred hCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCC
Q 012802 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (456)
Q Consensus 304 ~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 383 (456)
+ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|||+|++
T Consensus 249 ~-~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 327 (484)
T 3ifg_A 249 P-TVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESG 327 (484)
T ss_dssp G-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred c-cCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 384 ~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++||+++..+++++.++|++++++|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 328 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 400 (484)
T 3ifg_A 328 ATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFA 400 (484)
T ss_dssp CCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEEC
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeC
Confidence 9999999999999999999999999999999998755579999999999999999999999999999999996
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-87 Score=703.45 Aligned_cols=390 Identities=35% Similarity=0.570 Sum_probs=373.6
Q ss_pred CCccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHh
Q 012802 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (456)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~ 142 (456)
....++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||. .|+.++..+|.++|+++++.|++
T Consensus 9 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 86 (506)
T 3rh9_A 9 LENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALR--LTNPWPIETRRKWLEDIRDGLKE 86 (506)
T ss_dssp GSCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCC--SSSCCCHHHHHHHHHHHHHHHHH
T ss_pred ccccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 3456899999999887889999999999999999999999999999999999999 99999999999999999999999
Q ss_pred cHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEE-ccceEEEEEcCcChhHHHHH
Q 012802 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLH-EPIGVAGQIIPWNFPLLMFA 221 (456)
Q Consensus 143 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~-~P~GVv~~i~p~n~P~~~~~ 221 (456)
+.++|++++++|+|||+.++. .|+..+++.++|+++++++..+...+...+...++++ +|+|||++|+|||||+...+
T Consensus 87 ~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 165 (506)
T 3rh9_A 87 NREEIGRILCMEHGKPWKEAQ-GEVDYAAGFFDYCAKHISALDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIA 165 (506)
T ss_dssp THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGGCCEECSCCGGGCEEEEEEEECCSEEEECCSSSTTHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCceeeEeecccceEEEEECCCchHHHHHH
Confidence 999999999999999999988 6999999999999999998877665544566788889 99999999999999999999
Q ss_pred HHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHH
Q 012802 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (456)
Q Consensus 222 ~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~ 301 (456)
+++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|++.+.+..|++||+||+|+||||+.+|+.|++.
T Consensus 166 ~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~ 245 (506)
T 3rh9_A 166 KKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVD 245 (506)
T ss_dssp HHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred HhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCC
Q 012802 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381 (456)
Q Consensus 302 aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~ 381 (456)
+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++
T Consensus 246 aa~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 324 (506)
T 3rh9_A 246 TAE-QVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMN 324 (506)
T ss_dssp TTT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTS
T ss_pred hhh-cCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 987 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCC-CCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA-KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 382 ~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++++||+++..+++++.++|++++++|+++++||...+. +|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 325 ~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 400 (506)
T 3rh9_A 325 DGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFR 400 (506)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEEC
T ss_pred cCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeC
Confidence 9999999999999999999999999999999999976433 79999999999999999999999999999999996
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-87 Score=705.83 Aligned_cols=390 Identities=43% Similarity=0.803 Sum_probs=369.6
Q ss_pred cCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHH
Q 012802 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (456)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (456)
+++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||++|.|+.++..+|.++|+++++.|+++.+
T Consensus 37 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ 116 (517)
T 2o2p_A 37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQE 116 (517)
T ss_dssp CSEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 36899999998666789999999999999999999999999999999999985569999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCC----CCCceEEEEEccceEEEEEcCcChhHHHHH
Q 012802 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA----DGPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221 (456)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 221 (456)
+|++++++|+|||+.++...|+..+++.++||+++++++.+...+. ..+...++.++|+|||++|+|||||+.+.+
T Consensus 117 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 196 (517)
T 2o2p_A 117 ELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLS 196 (517)
T ss_dssp HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHH
Confidence 9999999999999999874699999999999999998876654443 223367899999999999999999999999
Q ss_pred HHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHH
Q 012802 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (456)
Q Consensus 222 ~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~ 301 (456)
+++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++..|..|++||+|+||||+.+|+.|++.
T Consensus 197 ~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~ 276 (517)
T 2o2p_A 197 WKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276 (517)
T ss_dssp HHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888889999999999999999999999999999
Q ss_pred Hh-hCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCC
Q 012802 302 AA-KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380 (456)
Q Consensus 302 aa-~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~ 380 (456)
++ + ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|||+
T Consensus 277 aa~~-~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~ 355 (517)
T 2o2p_A 277 CALS-NVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355 (517)
T ss_dssp HHHH-TCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTT
T ss_pred hHHh-cCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 98 6 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 381 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 381 ~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
|+++++||+++..+++++.++|++++++|+++++||.....+|+|++||||.+++++|++++||+||||++|++|+
T Consensus 356 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 431 (517)
T 2o2p_A 356 ERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFA 431 (517)
T ss_dssp STTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEEC
T ss_pred CCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcC
Confidence 9999999999999999999999999999999999997644469999999999999999999999999999999996
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-87 Score=704.81 Aligned_cols=388 Identities=38% Similarity=0.655 Sum_probs=371.6
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhc--ccCCCCCCCHHHHHHHHHHHHHHHHh
Q 012802 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAF--DEGPWPRMTAYERSKIILRFADLLER 142 (456)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~--~~~~W~~~~~~~R~~~L~~~a~~l~~ 142 (456)
.+++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++|| . .|+.++..+|.++|+++++.|++
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~--~w~~~~~~~R~~~L~~~a~~l~~ 109 (520)
T 3ed6_A 32 SQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESG--EWSQETAETRGKKVRAIADKIKE 109 (520)
T ss_dssp CCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHT--TTTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcccc--ccccCCHHHHHHHHHHHHHHHHH
Confidence 4679999999988788999999999999999999999999999999999999 7 89999999999999999999999
Q ss_pred cHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCC-CCceEEEEEccceEEEEEcCcChhHHHHH
Q 012802 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221 (456)
Q Consensus 143 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 221 (456)
+.++|++++++|+|||+.+++. |+..+++.++|++++++++.+...+.. .+...++.++|+|||++|+|||||+.+.+
T Consensus 110 ~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 188 (520)
T 3ed6_A 110 HREALARLETLDTGKTLEESYA-DMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQAS 188 (520)
T ss_dssp THHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccCccEEEEECCCccHHHHHH
Confidence 9999999999999999999875 999999999999999988776555433 46678899999999999999999999999
Q ss_pred HHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHH
Q 012802 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (456)
Q Consensus 222 ~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~ 301 (456)
+++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|++.+++..|.+||+||+|+||||+.+|+.|++.
T Consensus 189 ~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~ 268 (520)
T 3ed6_A 189 WKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKN 268 (520)
T ss_dssp HHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred HhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCC
Q 012802 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381 (456)
Q Consensus 302 aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~ 381 (456)
++. ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|
T Consensus 269 aa~-~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d 347 (520)
T 3ed6_A 269 AAN-NVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFD 347 (520)
T ss_dssp HHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTS
T ss_pred hhh-cCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 987 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccC----CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 382 ~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++++||+++..+++++.++|++++++|+++++||.... .+|+|++||||.+++++|++++||+||||++|++|+
T Consensus 348 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 426 (520)
T 3ed6_A 348 ADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFE 426 (520)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeC
Confidence 999999999999999999999999999999999997642 479999999999999999999999999999999996
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-87 Score=698.99 Aligned_cols=390 Identities=57% Similarity=0.980 Sum_probs=370.3
Q ss_pred cCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHHHHHHhcH
Q 012802 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHN 144 (456)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~-~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (456)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||++| .|+.++..+|.++|+++++.|+++.
T Consensus 21 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (501)
T 1bxs_A 21 TKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDR 100 (501)
T ss_dssp CSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHHH
Confidence 468999999987677899999999999999999999999999999999999743 5999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHH
Q 012802 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (456)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 224 (456)
++|++++++|+|||+.++...|+..+++.++||+++++++.+...+...+...++.++|+|||++|+|||||+...++++
T Consensus 101 ~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 180 (501)
T 1bxs_A 101 LLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKI 180 (501)
T ss_dssp HHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeeccCCcceeEEecCCceEEEECCCcchHHHHHHHH
Confidence 99999999999999988766799999999999999998877655444445567899999999999999999999999999
Q ss_pred hhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHh-
Q 012802 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA- 303 (456)
Q Consensus 225 ~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa- 303 (456)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+.+..|..|++||+|+||||+.+|+.|++.++
T Consensus 181 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~ 260 (501)
T 1bxs_A 181 GPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGK 260 (501)
T ss_dssp HHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999987888999999999999999999999999999998
Q ss_pred hCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCC
Q 012802 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (456)
Q Consensus 304 ~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 383 (456)
+ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus 261 ~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 339 (501)
T 1bxs_A 261 S-NLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPG 339 (501)
T ss_dssp T-TCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTT
T ss_pred c-cCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCcccC
Confidence 6 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 384 ~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++||+++..+++++.++|++++++|+++++||.....+|+|++||||.+++++|++++||+||||++|++|+
T Consensus 340 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 412 (501)
T 1bxs_A 340 VSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFK 412 (501)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEEC
T ss_pred CccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeC
Confidence 9999999999999999999999999999999997654469999999999999999999999999999999996
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-87 Score=700.19 Aligned_cols=392 Identities=35% Similarity=0.604 Sum_probs=371.0
Q ss_pred CCCCCccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHH
Q 012802 60 PVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADL 139 (456)
Q Consensus 60 ~~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~ 139 (456)
+..+...++||||+|+.+.++ +++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.
T Consensus 20 ~~~~~~~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~ 96 (498)
T 4f3x_A 20 FQSMMDTQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFV--GWSQTTPAERSNALLKIADA 96 (498)
T ss_dssp ---CCCCCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHH
T ss_pred hhhccccCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHH
Confidence 344455789999999987666 999999999999999999999999999999999999 89999999999999999999
Q ss_pred HHhcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCC-CCCceEEEEEccceEEEEEcCcChhHH
Q 012802 140 LERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLL 218 (456)
Q Consensus 140 l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~ 218 (456)
|+++.++|++++++|+|||+.++...|+..+++.++||+++++++.+...+. ..+...++.++|+|||++|+|||||+.
T Consensus 97 l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~ 176 (498)
T 4f3x_A 97 IEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLM 176 (498)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHH
T ss_pred HHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHH
Confidence 9999999999999999999999844699999999999999988876654432 245678899999999999999999999
Q ss_pred HHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHH
Q 012802 219 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 298 (456)
Q Consensus 219 ~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i 298 (456)
+.++++++||++||+||+|||+.+|+++..+++++.++ +|+|++|+|+|++.+.+..|+.||+||+|+||||+.+|+.|
T Consensus 177 ~~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i 255 (498)
T 4f3x_A 177 MMAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKV 255 (498)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHH
Confidence 99999999999999999999999999999999999999 99999999999888899999999999999999999999999
Q ss_pred HHHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCC
Q 012802 299 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 378 (456)
Q Consensus 299 ~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~ 378 (456)
++.+++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 256 ~~~aa~-~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~ 334 (498)
T 4f3x_A 256 LAAAAK-TVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNL 334 (498)
T ss_dssp HHHHHT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSC
T ss_pred HHHHHh-hCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCC
Confidence 999987 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCCHHHHHHHHHHHHHHhhCCC-EEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 379 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGA-KLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 379 p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga-~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
|+|+++++||+++..+++++.++|++++++|+ ++++||...+.+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 335 p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 413 (498)
T 4f3x_A 335 DDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFT 413 (498)
T ss_dssp SSGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEEC
T ss_pred CccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeC
Confidence 99999999999999999999999999999999 9999998755689999999999999999999999999999999996
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-87 Score=699.81 Aligned_cols=386 Identities=38% Similarity=0.663 Sum_probs=369.8
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 012802 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (456)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (456)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|++++
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 109 (504)
T 3ek1_A 32 KSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALS--GWAAKTAKERAGILRKWFDLIIANA 109 (504)
T ss_dssp CSSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHHH
Confidence 45789999999887889999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCC-CCceEEEEEccceEEEEEcCcChhHHHHHHH
Q 012802 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (456)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (456)
++|++++++|+|||+.+++. |+..+++.++||+.+.++..+...+.. .+...++.++|+|||++|+|||||+.+.+++
T Consensus 110 ~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 188 (504)
T 3ek1_A 110 DDIALIMTSEQGKPLAEARG-EVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRK 188 (504)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHH
Confidence 99999999999999999875 999999999999999888766554432 3567889999999999999999999999999
Q ss_pred HhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHh
Q 012802 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (456)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa 303 (456)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++..|++||+||+|+||||+.+|+.|++.++
T Consensus 189 ~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa 268 (504)
T 3ek1_A 189 AAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCA 268 (504)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHG
T ss_pred HHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999998
Q ss_pred hCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCC
Q 012802 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (456)
Q Consensus 304 ~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 383 (456)
+ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|||++++
T Consensus 269 ~-~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 347 (504)
T 3ek1_A 269 P-TIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPG 347 (504)
T ss_dssp G-GTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred h-hcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCcccc
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 384 ~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++||+++..+++++.++|++++++|+++++||.. .+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 348 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 418 (504)
T 3ek1_A 348 VVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE--LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFD 418 (504)
T ss_dssp CCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE--EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEEC
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCCceECCeEEecCCCcChhhcccccCcEEEEEEeC
Confidence 99999999999999999999999999999999975 369999999999999999999999999999999996
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-87 Score=696.30 Aligned_cols=390 Identities=37% Similarity=0.618 Sum_probs=369.9
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 012802 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (456)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (456)
+.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||.+|.|+.++..+|.++|+++++.|++++
T Consensus 8 ~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~ 87 (495)
T 3b4w_A 8 YDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERK 87 (495)
T ss_dssp CSSEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHH
Confidence 34789999999876778999999999999999999999999999999999998667999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHH
Q 012802 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (456)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 224 (456)
++|++++++|+|||+.++...|+..+++.++|++++++++.+...+...+...++.++|+|||++|+|||||+...++++
T Consensus 88 ~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 167 (495)
T 3b4w_A 88 DLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKI 167 (495)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceEEEEEccCceEEEECCCcchHHHHHHHH
Confidence 99999999999999999874699999999999999988877655443334567899999999999999999999999999
Q ss_pred hhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhh
Q 012802 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304 (456)
Q Consensus 225 ~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~ 304 (456)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+| +.+.+..|++|++||+|+||||+.+|+.|++.+++
T Consensus 168 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~ 246 (495)
T 3b4w_A 168 APALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAE 246 (495)
T ss_dssp HHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999 88899999999999999999999999999999987
Q ss_pred CCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCC
Q 012802 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384 (456)
Q Consensus 305 ~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 384 (456)
++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+++++
T Consensus 247 -~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 325 (495)
T 3b4w_A 247 -MLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAA 325 (495)
T ss_dssp -TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTTC
T ss_pred -cCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccC--CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 385 ~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++||+++..+++++.++|++++++|+++++||.... .+|+|++||||.+++++|++++||+||||++|++|+
T Consensus 326 ~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 399 (495)
T 3b4w_A 326 QIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYD 399 (495)
T ss_dssp CBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred ccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecC
Confidence 999999999999999999999999999999997643 369999999999999999999999999999999996
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-86 Score=700.18 Aligned_cols=390 Identities=43% Similarity=0.736 Sum_probs=371.9
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 012802 65 YTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (456)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (456)
..++||||+|+.+.++++++++||+| |+++++++.++.+|+++++++|++||+++.|+.++.++|.++|+++++.|+++
T Consensus 22 ~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 101 (528)
T 3u4j_A 22 RYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILAR 101 (528)
T ss_dssp BCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHH
Confidence 45799999999887889999999999 99999999999999999999999999212899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCC-CCceEEEEEccceEEEEEcCcChhHHHHHH
Q 012802 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (456)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (456)
.++|++++++|+|||+.++ ..|+..+++.++|++++++++.+...+.. .+...++.++|+|||++|+|||||+...++
T Consensus 102 ~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 180 (528)
T 3u4j_A 102 QEELALIESLEVGKPIAQA-RGEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASE 180 (528)
T ss_dssp HHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHHHHHH
Confidence 9999999999999999998 46999999999999999988776655544 466789999999999999999999999999
Q ss_pred HHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHH
Q 012802 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (456)
Q Consensus 223 ~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~a 302 (456)
++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+.+..|+.||+||+|+||||+.+|+.|++.+
T Consensus 181 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~a 260 (528)
T 3u4j_A 181 RVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIA 260 (528)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999998
Q ss_pred hhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCC
Q 012802 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 382 (456)
Q Consensus 303 a~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~ 382 (456)
++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++
T Consensus 261 a~-~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 339 (528)
T 3u4j_A 261 AR-TVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNE 339 (528)
T ss_dssp HT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTTST
T ss_pred Hh-cCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCCCc
Confidence 87 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCC-CCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA-KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 383 ~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++++||+++..+++++.++|++++++|+++++||..... +|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 340 ~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 414 (528)
T 3u4j_A 340 RTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFK 414 (528)
T ss_dssp TCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeC
Confidence 999999999999999999999999999999999986543 79999999999999999999999999999999996
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-86 Score=695.36 Aligned_cols=391 Identities=40% Similarity=0.723 Sum_probs=370.6
Q ss_pred CccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccC---CCCCCCHHHHHHHHHHHHHHH
Q 012802 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG---PWPRMTAYERSKIILRFADLL 140 (456)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~---~W~~~~~~~R~~~L~~~a~~l 140 (456)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||.+| .|+.++..+|.++|+++++.|
T Consensus 6 ~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~l 85 (503)
T 3iwj_A 6 PTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKV 85 (503)
T ss_dssp CCCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHHH
T ss_pred CCCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHHH
Confidence 34679999999988788999999999999999999999999999999999999743 799999999999999999999
Q ss_pred HhcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCccc---CC-CCCceEEEEEccceEEEEEcCcChh
Q 012802 141 ERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA---PA-DGPYHVQTLHEPIGVAGQIIPWNFP 216 (456)
Q Consensus 141 ~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~---~~-~~~~~~~~~~~P~GVv~~i~p~n~P 216 (456)
+++.++|++++++|+|||+.++.. |+..+++.++|++.+++++.+... .. ..+...++.++|+|||++|+|||||
T Consensus 86 ~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P 164 (503)
T 3iwj_A 86 TEKKPELAKLESIDCGKPLDEAAW-DIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYP 164 (503)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchH
Confidence 999999999999999999999864 999999999999999888765431 11 2356788999999999999999999
Q ss_pred HHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHH
Q 012802 217 LLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGK 296 (456)
Q Consensus 217 ~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~ 296 (456)
+.+.++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+.+..|+.|++||+|+||||+.+|+
T Consensus 165 ~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~ 244 (503)
T 3iwj_A 165 MLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGS 244 (503)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHH
Confidence 99999999999999999999999999999999999999999999999999998888999999999999999999999999
Q ss_pred HHHHHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhccc
Q 012802 297 IVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 376 (456)
Q Consensus 297 ~i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~ 376 (456)
.|++.++. ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 245 ~i~~~aa~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 323 (503)
T 3iwj_A 245 KIMTAAAQ-LVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKI 323 (503)
T ss_dssp HHHHHHGG-GTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCB
T ss_pred HHHHHHhc-CCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccC
Confidence 99999887 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccC--CCCceEecEEEeeCCCCCcccccccccceeEEEE
Q 012802 377 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 454 (456)
Q Consensus 377 G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~ 454 (456)
|||+++++++||+++..+++++.++|++++++|+++++||...+ .+|+|++|||+.+++++|++++||+||||++|++
T Consensus 324 g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~ 403 (503)
T 3iwj_A 324 SDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKT 403 (503)
T ss_dssp SCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEE
T ss_pred CCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEEE
Confidence 99999999999999999999999999999999999999997643 5799999999999999999999999999999999
Q ss_pred eC
Q 012802 455 YK 456 (456)
Q Consensus 455 ~~ 456 (456)
|+
T Consensus 404 ~~ 405 (503)
T 3iwj_A 404 FS 405 (503)
T ss_dssp ES
T ss_pred eC
Confidence 96
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-87 Score=697.57 Aligned_cols=389 Identities=61% Similarity=1.015 Sum_probs=369.0
Q ss_pred CceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHHHHHHhcHH
Q 012802 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHND 145 (456)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~-~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (456)
++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++||++| .|+.++..+|.++|+++++.|+++.+
T Consensus 21 ~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 100 (500)
T 1o04_A 21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRT 100 (500)
T ss_dssp SEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 58999999987677899999999999999999999999999999999999732 59999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHh
Q 012802 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225 (456)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 225 (456)
+|++++++|+|||+.++...|+..+++.++||++++++..+...+...+...++.++|+|||++|+|||||+.+.+++++
T Consensus 101 ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a 180 (500)
T 1o04_A 101 YLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLG 180 (500)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceecCCCceEEEEEecCCcEEEECCCCchHHHHHHHHH
Confidence 99999999999999987667999999999999999888766544444455678999999999999999999999999999
Q ss_pred hhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHh-h
Q 012802 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA-K 304 (456)
Q Consensus 226 ~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa-~ 304 (456)
+||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++..|+.|++||+|+||||+.+|+.|++.++ +
T Consensus 181 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~ 260 (500)
T 1o04_A 181 PALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSS 260 (500)
T ss_dssp HHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHT
T ss_pred HHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhh
Confidence 999999999999999999999999999999999999999999977789999999999999999999999999999998 6
Q ss_pred CCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCC
Q 012802 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384 (456)
Q Consensus 305 ~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 384 (456)
++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|+++
T Consensus 261 -~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 339 (500)
T 1o04_A 261 -NLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKT 339 (500)
T ss_dssp -TCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTC
T ss_pred -cCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 385 ~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++||+++..+++++.++|++++++|+++++||.....+|+|++||||.+++++|++++||+||||++|++|+
T Consensus 340 ~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 411 (500)
T 1o04_A 340 EQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFK 411 (500)
T ss_dssp SBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEEC
T ss_pred ccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeC
Confidence 999999999999999999999999999999997643469999999999999999999999999999999996
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-86 Score=693.21 Aligned_cols=387 Identities=35% Similarity=0.597 Sum_probs=364.9
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 012802 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (456)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (456)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|+++.
T Consensus 25 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 102 (497)
T 3i44_A 25 KRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQ--TWKTTSPHERLGFVEKILEIYEKRS 102 (497)
T ss_dssp ECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHHH
Confidence 46899999999988888999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEE-EccceEEEEEcCcChhHHHHHHH
Q 012802 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTL-HEPIGVAGQIIPWNFPLLMFAWK 223 (456)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~-~~P~GVv~~i~p~n~P~~~~~~~ 223 (456)
++|++++++|+|||+.+++..|+..+++.++|+++..+......... .+...++. ++|+|||++|+|||||+.+.+++
T Consensus 103 ~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 181 (497)
T 3i44_A 103 SDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALI-EGNEQAILHYDAIGVVGLITPWNWPMNQVTLK 181 (497)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEESS-TTCSSCEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccc-CCceeEEEeecCceEEEEECCCcchHHHHHHH
Confidence 99999999999999999875699999999999998776543322211 13446677 99999999999999999999999
Q ss_pred HhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHh
Q 012802 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (456)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa 303 (456)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++..|++||+||+|+||||+.+|+.|++.++
T Consensus 182 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~aa 261 (497)
T 3i44_A 182 VIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNAS 261 (497)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999998
Q ss_pred hCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCC
Q 012802 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (456)
Q Consensus 304 ~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 383 (456)
+ ++||+++|||||||+||++||| +.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|||+|++
T Consensus 262 ~-~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~ 339 (497)
T 3i44_A 262 N-TLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTG 339 (497)
T ss_dssp T-TTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSCS
T ss_pred h-cCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 7 8999999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCc-ccC--CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE-RLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 384 ~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~-~~~--~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++||+++..+++++.++|++++++|+++++||. ... .+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 340 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 415 (497)
T 3i44_A 340 NHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFN 415 (497)
T ss_dssp SCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecC
Confidence 9999999999999999999999999999999994 322 379999999999999999999999999999999996
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-86 Score=692.67 Aligned_cols=388 Identities=37% Similarity=0.683 Sum_probs=367.7
Q ss_pred CccCceecCEeeeCCCCCe-eeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHh
Q 012802 64 DYTQLLINGQFVDSASGKT-FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (456)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~-~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~ 142 (456)
...++||||+|+.+.++++ ++++||+||+++++++.++.+|+++++++|++||. .|+.++.++|.++|+++++.|++
T Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 95 (503)
T 1a4s_A 18 TDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL--KWSKMAGIERSRVMLEAARIIRE 95 (503)
T ss_dssp CSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHH
T ss_pred cccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHH
Confidence 3457899999998766788 99999999999999999999999999999999999 89999999999999999999999
Q ss_pred cHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHH
Q 012802 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (456)
Q Consensus 143 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (456)
+.++|++++++|+|||+.++. .|+..+++.++|+++++++..+...+...+...++.++|+|||++|+|||||+.+.++
T Consensus 96 ~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 174 (503)
T 1a4s_A 96 RRDNIAKLEVINNGKTITEAE-YDIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAW 174 (503)
T ss_dssp THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccCCCCceeEEEEecCceEEEECCCcchHHHHHH
Confidence 999999999999999999986 4999999999999999988766543333344678999999999999999999999999
Q ss_pred HHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHH
Q 012802 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (456)
Q Consensus 223 ~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~a 302 (456)
++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++ +++..|..|++||+|+||||+.+|+.|++.+
T Consensus 175 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~a 253 (503)
T 1a4s_A 175 KCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVMEMS 253 (503)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999977 8899999999999999999999999999999
Q ss_pred hhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCC
Q 012802 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 382 (456)
Q Consensus 303 a~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~ 382 (456)
++ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|||+++
T Consensus 254 a~-~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 332 (503)
T 1a4s_A 254 AK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLT 332 (503)
T ss_dssp HT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTST
T ss_pred hh-cCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCccc
Confidence 87 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCccc--C----CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL--G----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 383 ~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~--~----~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++++||+++..+++++.++|++++++|+++++||... . .+|+|++||||.+++++|++++||+||||++|++|+
T Consensus 333 ~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 412 (503)
T 1a4s_A 333 ETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFD 412 (503)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEEC
T ss_pred CCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecC
Confidence 9999999999999999999999999999999999764 2 369999999999999999999999999999999996
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-86 Score=694.99 Aligned_cols=391 Identities=35% Similarity=0.595 Sum_probs=370.0
Q ss_pred CCCccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 012802 62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE 141 (456)
Q Consensus 62 ~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~ 141 (456)
..+..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||. .|+.++.++|.++|+++++.|+
T Consensus 9 ~~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 86 (497)
T 3k2w_A 9 HFKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQK--AWAKLTARTRQNMLRTFANKIR 86 (497)
T ss_dssp CCCTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHH
T ss_pred cccccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHH
Confidence 34557899999999987889999999999999999999999999999999999999 8999999999999999999999
Q ss_pred hcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCC-CCCceEEEEEccceEEEEEcCcChhHHHH
Q 012802 142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220 (456)
Q Consensus 142 ~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~ 220 (456)
++.++|++++++|+|||+.++. .|+..+++.++|++.+++++.+...+. ..+...++.++|+|||++|+|||||+...
T Consensus 87 ~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 165 (497)
T 3k2w_A 87 ENKHILAPMLVAEQGKLLSVAE-MEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALA 165 (497)
T ss_dssp TTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHHH
Confidence 9999999999999999999987 599999999999999988876654443 24667889999999999999999999999
Q ss_pred HHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHH
Q 012802 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (456)
Q Consensus 221 ~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~ 300 (456)
++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+.+..|+.||+||+|+||||+.+|+.|++
T Consensus 166 ~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~ 245 (497)
T 3k2w_A 166 GRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYK 245 (497)
T ss_dssp HHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988889999999999999999999999999999
Q ss_pred HHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCC
Q 012802 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380 (456)
Q Consensus 301 ~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~ 380 (456)
.+++ ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+
T Consensus 246 ~aa~-~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~ 324 (497)
T 3k2w_A 246 TSAE-YMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPM 324 (497)
T ss_dssp HHTT-TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTT
T ss_pred Hhhh-cCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCC
Confidence 9987 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcc--cCC--CCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 381 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER--LGA--KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 381 ~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~--~~~--~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++++++||+++..+++++.++|++++++|+++++||.. .+. +|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 325 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 404 (497)
T 3k2w_A 325 DADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVS 404 (497)
T ss_dssp STTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeC
Confidence 99999999999999999999999999999999999973 222 69999999999999999999999999999999996
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-86 Score=694.72 Aligned_cols=383 Identities=38% Similarity=0.678 Sum_probs=367.1
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 012802 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (456)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (456)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||. .|+.++..+|.++|+++++.|+++.
T Consensus 14 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 91 (517)
T 3r31_A 14 KASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQK--EWAAMSPMARGRILKRAADIMRERN 91 (517)
T ss_dssp SSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHH
Confidence 46899999999888889999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHh----hcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHH
Q 012802 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK----IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220 (456)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~----~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~ 220 (456)
++|++++++|+|||+.++ |+..+++.++|++++.++ +.+...+...+. .+++++|+|||++|+|||||+...
T Consensus 92 ~ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~~~~-~~~~~~P~GVV~~I~PwN~P~~~~ 167 (517)
T 3r31_A 92 DALSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAPSALNGDYIPLGGDF-AYTKRVPLGVCVGIGAWNYPQQIA 167 (517)
T ss_dssp HHHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEECSSSE-EEEEEEECSEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhccccccCcccccCCCc-ceEEEcCccEEEEECCCcchHHHH
Confidence 999999999999999886 999999999999999988 666655544455 899999999999999999999999
Q ss_pred HHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHH
Q 012802 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (456)
Q Consensus 221 ~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~ 300 (456)
++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+| +.+.+..|+.||+||+|+||||+.+|+.|++
T Consensus 168 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~ 246 (517)
T 3r31_A 168 CWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPTGRKVAA 246 (517)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcCEEeccCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 7789999999999999999999999999999
Q ss_pred HHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCC
Q 012802 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380 (456)
Q Consensus 301 ~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~ 380 (456)
.+++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+
T Consensus 247 ~aa~-~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~ 325 (517)
T 3r31_A 247 AAAG-HLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPL 325 (517)
T ss_dssp HHHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCCTT
T ss_pred Hhhc-CCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCCCC
Confidence 9998 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcc-c---CCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 381 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER-L---GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 381 ~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~-~---~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
|+++++||+++..+++++.++|++++++|+++++|| . . .++|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 326 ~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG-~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 404 (517)
T 3r31_A 326 DYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGG-GIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFD 404 (517)
T ss_dssp STTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECC-SCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEEC
T ss_pred CcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECC-ccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeC
Confidence 999999999999999999999999999999999999 4 2 2479999999999999999999999999999999996
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-85 Score=693.28 Aligned_cols=385 Identities=34% Similarity=0.574 Sum_probs=368.4
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 012802 65 YTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (456)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (456)
.+++||||+|+. ++++++++||+| |+++++++.++.+|+++|+++|++||. .|+.++..+|.++|+++++.|+++
T Consensus 37 ~~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 112 (538)
T 3qan_A 37 EYPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQ--TWRNVNPEERANILVKAAAIIRRR 112 (538)
T ss_dssp EECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHH
Confidence 468999999997 678999999999 999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHH-hHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHH
Q 012802 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW-ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (456)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~-~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (456)
+++|++++++|+|||+.++.. |+..+++.++||+++ .+...+...+...+...++.++|+|||++|+|||||+.+.++
T Consensus 113 ~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 191 (538)
T 3qan_A 113 KHEFSAWLVHEAGKPWKEADA-DTAEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVG 191 (538)
T ss_dssp HHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHTCBCCCCCTTEEEEEEEEECCEEEEECCSTTTTHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCeeecccCCcceeeecCCCcEEEEECCCchHHHHHHH
Confidence 999999999999999999876 999999999999998 566667666544567889999999999999999999999999
Q ss_pred HHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHH
Q 012802 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (456)
Q Consensus 223 ~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~a 302 (456)
++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++..|+.||+||+|+||||+.+|+.|++.+
T Consensus 192 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~a 271 (538)
T 3qan_A 192 TAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERA 271 (538)
T ss_dssp HHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999999
Q ss_pred hhCC------CCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhccc
Q 012802 303 AKSN------LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 376 (456)
Q Consensus 303 a~~~------~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~ 376 (456)
+. + +||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++
T Consensus 272 a~-~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~v 350 (538)
T 3qan_A 272 AV-VRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTV 350 (538)
T ss_dssp TS-CCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCB
T ss_pred hh-ccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccC
Confidence 87 5 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 377 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 377 G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
|||+|+++++||+++..+++++.++|++++++| ++++||.....+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 351 G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~ 429 (538)
T 3qan_A 351 GDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKAN 429 (538)
T ss_dssp SCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeC
Confidence 999999999999999999999999999999999 9999998754479999999999999999999999999999999996
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-85 Score=686.10 Aligned_cols=388 Identities=37% Similarity=0.669 Sum_probs=370.6
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 012802 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (456)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (456)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.
T Consensus 9 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 86 (481)
T 3jz4_A 9 RQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKERATILRNWFNLMMEHQ 86 (481)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHHHH
Confidence 35789999999887889999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCC-CCCceEEEEEccceEEEEEcCcChhHHHHHHH
Q 012802 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (456)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (456)
++|++++++|+|||..+++. |+..+++.++|++.+..+..+...+. ..+...+++++|+|||++|+|||||+...+++
T Consensus 87 ~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 165 (481)
T 3jz4_A 87 DDLARLMTLEQGKPLAEAKG-EISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRK 165 (481)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHHH
Confidence 99999999999999999874 99999999999999887766655443 24567889999999999999999999999999
Q ss_pred HhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHh
Q 012802 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (456)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa 303 (456)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+.+..|++||+||+|+||||+.+|+.|++.++
T Consensus 166 ~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa 245 (481)
T 3jz4_A 166 AGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCA 245 (481)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHT
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999998
Q ss_pred hCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCC
Q 012802 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (456)
Q Consensus 304 ~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 383 (456)
+ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|++++
T Consensus 246 ~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 324 (481)
T 3jz4_A 246 K-DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNG 324 (481)
T ss_dssp T-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTT
T ss_pred h-cCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCc
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 384 ~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++||+++..+++++.++|++++++|+++++||...+.+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 325 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 397 (481)
T 3jz4_A 325 VTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFK 397 (481)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEEC
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEEC
Confidence 9999999999999999999999999999999998655568999999999999999999999999999999996
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-85 Score=685.53 Aligned_cols=388 Identities=35% Similarity=0.617 Sum_probs=368.1
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 012802 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (456)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (456)
+.++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++||. .|+.++.++|.++|+++++.|++++
T Consensus 6 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (479)
T 2imp_A 6 QHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQP--EWEALPAIERASWLRKISAGIRERA 83 (479)
T ss_dssp ECCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHH
Confidence 35789999999876778999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCC-CCceEEEEEccceEEEEEcCcChhHHHHHHH
Q 012802 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (456)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (456)
++|++++++|+|||+.++. .|+..+++.++|+++++++..+...+.. .+...++.++|+|||++|+|||||+...+++
T Consensus 84 ~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 162 (479)
T 2imp_A 84 SEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARK 162 (479)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHH
Confidence 9999999999999999987 5999999999999998887766554332 2456789999999999999999999999999
Q ss_pred HhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHh
Q 012802 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (456)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa 303 (456)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++..|.+|++||+|+||||+.+|+.|++.++
T Consensus 163 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa 242 (479)
T 2imp_A 163 MAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAA 242 (479)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999977778999999999999999999999999999998
Q ss_pred hCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCC-C
Q 012802 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK-G 382 (456)
Q Consensus 304 ~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~-~ 382 (456)
+ ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|+| +
T Consensus 243 ~-~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 321 (479)
T 2imp_A 243 K-NITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERN 321 (479)
T ss_dssp T-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCS
T ss_pred c-cCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccC
Confidence 7 8999999999999999999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred CCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 383 ~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++++||+++..+++++.++|++++++|+++++||...+.+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 322 ~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~ 395 (479)
T 2imp_A 322 DIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFD 395 (479)
T ss_dssp SCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEES
T ss_pred CCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeC
Confidence 99999999999999999999999999999999997633469999999999999999999999999999999996
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-85 Score=690.97 Aligned_cols=386 Identities=42% Similarity=0.730 Sum_probs=367.8
Q ss_pred cCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHH
Q 012802 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (456)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (456)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||. .|+.++..+|.++|+++++.|+++.+
T Consensus 27 ~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 104 (515)
T 2d4e_A 27 ALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQ--RWSRTKAKERKRYLLRIAELIEKHAD 104 (515)
T ss_dssp BCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999876778999999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCC-CCCceEEEEEccceEEEEEcCcChhHHHHHHHH
Q 012802 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (456)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 224 (456)
+|++++++|+|||+.++. .|+..+++.++|+++++++..+...+. ..+...++.++|+|||++|+|||||+.+.++++
T Consensus 105 ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 183 (515)
T 2d4e_A 105 ELAVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRI 183 (515)
T ss_dssp HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhh
Confidence 999999999999999987 699999999999999988877665443 335567899999999999999999999999999
Q ss_pred hhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhh
Q 012802 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304 (456)
Q Consensus 225 ~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~ 304 (456)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++..|..|++||+|+||||+.+|+.|++.+++
T Consensus 184 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~ 263 (515)
T 2d4e_A 184 APALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAAD 263 (515)
T ss_dssp HHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGG
T ss_pred hHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999777889999999999999999999999999999987
Q ss_pred CCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCC
Q 012802 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384 (456)
Q Consensus 305 ~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 384 (456)
++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.++++
T Consensus 264 -~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 342 (515)
T 2d4e_A 264 -HLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPET 342 (515)
T ss_dssp -GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTC
T ss_pred -cCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccC--------CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--------AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 385 ~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--------~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++||+++..+++++.++|++++++|+++++||.... ..|+|++|||+.+ +++|++++||+||||++|++|+
T Consensus 343 ~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~ 421 (515)
T 2d4e_A 343 EVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFK 421 (515)
T ss_dssp SBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEES
T ss_pred ccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeC
Confidence 999999999999999999999999999999997643 2699999999999 9999999999999999999996
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-86 Score=692.87 Aligned_cols=388 Identities=29% Similarity=0.467 Sum_probs=367.2
Q ss_pred CccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 012802 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (456)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (456)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||. .|+.++..+|.++|+++++.|+++
T Consensus 25 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 102 (521)
T 4e4g_A 25 YELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQP--KWAATNPQRRARVFMKFVQLLNDN 102 (521)
T ss_dssp EEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred hccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHH
Confidence 346899999999887789999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccC-CCCCceEEEEEccceEEEEEcCcChhHHHHHH
Q 012802 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (456)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (456)
.++|++++++|+|||+.+++ .|+..+++.++||+++.+.+.+...+ ...+...++.++|+|||++|+|||||+.+.++
T Consensus 103 ~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 181 (521)
T 4e4g_A 103 MNELAEMLSREHGKTIDDAK-GDIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPMW 181 (521)
T ss_dssp HHHHHHHHHHHHCSCHHHHH-HHHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSCTTHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcchHHHHHH
Confidence 99999999999999999987 49999999999999988777655432 12356788999999999999999999999999
Q ss_pred HHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHH
Q 012802 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (456)
Q Consensus 223 ~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~a 302 (456)
++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|+ .+.+..|+.||+||+|+||||+.+|+.|++.+
T Consensus 182 ~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~-~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~a 260 (521)
T 4e4g_A 182 MFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGD-KGAVDAILTHPDIAAVSFVGSTPIARYVYGTA 260 (521)
T ss_dssp HHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCC-HHHHHHHHTCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCC-hHHHHHHHhCCCcCEEEEECCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999995 45679999999999999999999999999999
Q ss_pred hhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccc-hHHHHHHHHHHHhhhcccCCCCC
Q 012802 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPFK 381 (456)
Q Consensus 303 a~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~G~p~~ 381 (456)
++ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++ +||+|+++|+++++++++|+|++
T Consensus 261 a~-~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~~ 339 (521)
T 4e4g_A 261 AM-NGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYTD 339 (521)
T ss_dssp HH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTTC
T ss_pred hh-cCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCCC
Confidence 88 89999999999999999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCccc----CCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL----GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 382 ~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++++||+++..+++++.++|++++++|+++++||... ..+|+|++||||.+++++|++++||+||||++|++|+
T Consensus 340 ~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 418 (521)
T 4e4g_A 340 EKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRAR 418 (521)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBS
T ss_pred ccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeC
Confidence 99999999999999999999999999999999999752 2579999999999999999999999999999999985
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-85 Score=687.11 Aligned_cols=383 Identities=34% Similarity=0.520 Sum_probs=364.8
Q ss_pred CccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 012802 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (456)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (456)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||. .|+.++..+|.++|+++++.|+++
T Consensus 10 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 87 (505)
T 3prl_A 10 FNANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQK--IWKIRPIHERVDLLYAWADLLEER 87 (505)
T ss_dssp EECCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred cccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHH
Confidence 345899999999887789999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCC--C----CceEEEEEccceEEEEEcCcChhH
Q 012802 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD--G----PYHVQTLHEPIGVAGQIIPWNFPL 217 (456)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~--~----~~~~~~~~~P~GVv~~i~p~n~P~ 217 (456)
.++|++++++|+|||+.++.. |+..+++.++|++++.++..+...+.. . +...++.++|+|||++|+|||||+
T Consensus 88 ~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~ 166 (505)
T 3prl_A 88 KEIIGELIMHEVAKPKKSAIG-EVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPV 166 (505)
T ss_dssp HHHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTT
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHH
Confidence 999999999999999999875 999999999999999888766543321 1 456789999999999999999999
Q ss_pred HHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHH
Q 012802 218 LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 297 (456)
Q Consensus 218 ~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~ 297 (456)
.+.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.+++..|..||+||+|+||||+.+|+.
T Consensus 167 ~~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~ 246 (505)
T 3prl_A 167 NLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGER 246 (505)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988889999999999999999999999999
Q ss_pred HHHHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccC
Q 012802 298 VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 377 (456)
Q Consensus 298 i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G 377 (456)
|++.++ +||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|
T Consensus 247 i~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g 323 (505)
T 3prl_A 247 ISEKAK---MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVG 323 (505)
T ss_dssp HHHHCC---SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBS
T ss_pred HHHHcc---CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccC
Confidence 999876 79999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 378 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 378 ~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
||+ +++++||+++..+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 324 ~p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~---~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~ 398 (505)
T 3prl_A 324 SPE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR---QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVK 398 (505)
T ss_dssp CTT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred CCC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeC
Confidence 999 9999999999999999999999999999999999974 58999999999999999999999999999999996
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-85 Score=685.99 Aligned_cols=386 Identities=38% Similarity=0.658 Sum_probs=365.5
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 012802 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (456)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (456)
..++||||+|+.+.+ ++++++||+||+++++++.++.+|+++++++|++||. .|+.++..+|.++|+++++.|++++
T Consensus 23 ~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 99 (495)
T 1wnd_A 23 QHKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA--EWGQTTPKVRAECLLKLADVIEENG 99 (495)
T ss_dssp CCCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHH
Confidence 357899999998655 8899999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCC-CCceEEEEEccceEEEEEcCcChhHHHHHHH
Q 012802 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (456)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (456)
++|++++++|+|||+.++...|+..+++.++|+++++++..+...+.. .+...++.++|+|||++|+|||||+...+++
T Consensus 100 ~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 179 (495)
T 1wnd_A 100 QVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWK 179 (495)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcchHHHHHHH
Confidence 999999999999999998655999999999999999887765544322 2446789999999999999999999999999
Q ss_pred HhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHh
Q 012802 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (456)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa 303 (456)
+++||++||+||+|||+.+|+++..+++++.++ +|+|++|+|+|++.+.+..|++||+||+|+||||+.+|+.|++.++
T Consensus 180 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa 258 (495)
T 1wnd_A 180 LAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTA 258 (495)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHG
T ss_pred HHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHH
Confidence 999999999999999999999999999999999 9999999999977788999999999999999999999999999998
Q ss_pred hCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCC
Q 012802 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (456)
Q Consensus 304 ~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 383 (456)
+ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|||+|++
T Consensus 259 ~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 337 (495)
T 1wnd_A 259 S-SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDES 337 (495)
T ss_dssp G-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTT
T ss_pred h-cCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCC
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHhhCC-CEEEeCCc-ccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 384 IQQGPQIDSEQFEKILKYIRSGVDGG-AKLETGGE-RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 384 ~~~Gp~i~~~~~~~~~~~i~~a~~~G-a~v~~gg~-~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++||+++..+++++.++|++++++| +++++||. .. +.|+|++||||.+++++|++++||+||||++|++|+
T Consensus 338 ~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 411 (495)
T 1wnd_A 338 TELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-GNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFD 411 (495)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-SSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEEC
T ss_pred CCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-CCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeC
Confidence 99999999999999999999999999 99999997 43 369999999999999999999999999999999996
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-84 Score=679.52 Aligned_cols=384 Identities=37% Similarity=0.629 Sum_probs=365.3
Q ss_pred cCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHH
Q 012802 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (456)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (456)
.++||||+|+.+. ++++++||+||+++++++.++.+|++++++.|++||. .|+.++.++|.++|+++++.|+++.+
T Consensus 13 ~~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 88 (487)
T 2w8n_A 13 TDSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFC--RWREVSAKERSSLLRKWYNLMIQNKD 88 (487)
T ss_dssp CSEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cCeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999754 7899999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCC-CCCceEEEEEccceEEEEEcCcChhHHHHHHHH
Q 012802 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (456)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 224 (456)
+|++++++|+|||+.++.. |+..+++.++|++++.+++.+...+. ..+...++.++|+|||++|+|||||+...++++
T Consensus 89 ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 167 (487)
T 2w8n_A 89 DLARIITAESGKPLKEAHG-EILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKV 167 (487)
T ss_dssp HHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHH
Confidence 9999999999999999875 99999999999999988876665443 235677899999999999999999999999999
Q ss_pred hhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEec---CCchHHHHHHHcCCCccEEEEeCChHHHHHHHHH
Q 012802 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVS---GYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (456)
Q Consensus 225 ~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~---g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~ 301 (456)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+ |++.+.+..|.+|++||+|+||||+.+|+.|++.
T Consensus 168 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~ 247 (487)
T 2w8n_A 168 GAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHH 247 (487)
T ss_dssp HHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999 8677789999999999999999999999999999
Q ss_pred HhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhh-cccCCCC
Q 012802 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK-RVVGDPF 380 (456)
Q Consensus 302 aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~-~~~G~p~ 380 (456)
+++ ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.+++++ +++|||.
T Consensus 248 aa~-~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~ 326 (487)
T 2w8n_A 248 AAN-SVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGF 326 (487)
T ss_dssp HHT-TTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTT
T ss_pred Hhc-cCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcc
Confidence 987 89999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCc-eEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 381 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY-YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 381 ~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~-~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++++++||+++..+++++.++|++++++|+++++||... ++|+ |++|||+.+++++|++++||+||||++|++|+
T Consensus 327 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 402 (487)
T 2w8n_A 327 EEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-QLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFD 402 (487)
T ss_dssp STTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-TTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEES
T ss_pred cccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-CCCCceECCEEEecCCCcchhhhcccccceEEEEEeC
Confidence 999999999999999999999999999999999999763 3689 99999999999999999999999999999996
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-84 Score=678.55 Aligned_cols=386 Identities=31% Similarity=0.508 Sum_probs=366.1
Q ss_pred CccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 012802 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (456)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (456)
..+++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++||. .|+.++.++|.++|+++++.|+++
T Consensus 5 ~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 82 (485)
T 4dng_A 5 TLNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQK--EWAKSTTEDRKAVLQKARGYLHEN 82 (485)
T ss_dssp GCCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHH
Confidence 346899999999887889999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCC--CCceEEEEEccceEEEEEcCcChhHHHHH
Q 012802 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD--GPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221 (456)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 221 (456)
.++|++++++|+|||+.+++. |+..+++.++|++++.+++.+...+.. .+...+++++|+|||++|+|||||+...+
T Consensus 83 ~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 161 (485)
T 4dng_A 83 RDDIIMMIARETGGTIIKSTI-ELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSM 161 (485)
T ss_dssp HHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHHH
Confidence 999999999999999999886 999999999999999988777655432 35678999999999999999999999999
Q ss_pred HHHhhhhhcCCEEEeecCCCChhHH-HHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHH
Q 012802 222 WKVGPALACGNTIVLKTAEQTPLSA-LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (456)
Q Consensus 222 ~~l~~ALaaGN~VVlkps~~~p~~~-~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~ 300 (456)
+++++||++||+||+|||+.+|+++ .++.+++.++|+|+|++|+|+|++.+.+..|++||+||+|+||||+.+|+.|++
T Consensus 162 ~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~ 241 (485)
T 4dng_A 162 RSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGE 241 (485)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHH
Confidence 9999999999999999999999999 999999999999999999999988789999999999999999999999999999
Q ss_pred HHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCC
Q 012802 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380 (456)
Q Consensus 301 ~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~ 380 (456)
.+++ ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.
T Consensus 242 ~aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~ 320 (485)
T 4dng_A 242 IAGR-AFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQT 320 (485)
T ss_dssp HHHH-HTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTT
T ss_pred HHhh-hccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCC
Confidence 9987 889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 381 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 381 ~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
|+++++||+++..+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 321 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~ 393 (485)
T 4dng_A 321 DPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR---VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAG 393 (485)
T ss_dssp STTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEES
T ss_pred cCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCcEECCEEEecCCCCChhhcCccccceEEEEEeC
Confidence 99999999999999999999999999999999999975 58999999999999999999999999999999996
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-84 Score=678.05 Aligned_cols=385 Identities=28% Similarity=0.492 Sum_probs=363.2
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 012802 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (456)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (456)
.++.||||+|+. ++++++++||+||+++++++.++.+|+++++++|++||. .|+.++..+|.++|+++++.|+++.
T Consensus 23 ~~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 98 (500)
T 2j6l_A 23 ENEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWK--IWADIPAPKRGEIVRQIGDALREKI 98 (500)
T ss_dssp EEECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 478999999994 568899999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCC-CCceEEEEEccceEEEEEcCcChhHHHHHHH
Q 012802 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (456)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (456)
++|++++++|+|||+.++. .|+..+++.++|++++.+++.+...+.. .+...++.++|+|||++|+|||||+.+.+++
T Consensus 99 ~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 177 (500)
T 2j6l_A 99 QVLGSLVSLEMGKILVEGV-GEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWN 177 (500)
T ss_dssp HHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEECCCcchhhHHHHH
Confidence 9999999999999999985 5999999999999998877766544432 2445678899999999999999999999999
Q ss_pred HhhhhhcCCEEEeecCCCChhHHHHHHHHHH----HcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHH
Q 012802 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299 (456)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~----~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~ 299 (456)
+++||++||+||+|||+.+|+++..+++++. ++|+|+|++|+|+| +.+++..|..|++||+|+||||+.+|+.|+
T Consensus 178 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~I~FTGS~~~g~~i~ 256 (500)
T 2j6l_A 178 NAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQVG 256 (500)
T ss_dssp HHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHCTTCSEEEEESCHHHHHHHH
T ss_pred HHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 9999999999999999999999999988876 46999999999999 778899999999999999999999999999
Q ss_pred HHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCC
Q 012802 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379 (456)
Q Consensus 300 ~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p 379 (456)
+.+++ +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|
T Consensus 257 ~~aa~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 335 (500)
T 2j6l_A 257 LMVQE-RFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNP 335 (500)
T ss_dssp HHHHH-TTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCT
T ss_pred HHhcc-CCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCCc
Confidence 99988 89999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 380 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 380 ~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
.++++++||+++..+++++.++|++++++|+++++||...+.+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 336 ~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 412 (500)
T 2j6l_A 336 WDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQ 412 (500)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEEC
T ss_pred ccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeC
Confidence 99999999999999999999999999999999999997644569999999999999999999999999999999996
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-84 Score=678.65 Aligned_cols=389 Identities=35% Similarity=0.575 Sum_probs=369.4
Q ss_pred CCCCccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHH
Q 012802 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLL 140 (456)
Q Consensus 61 ~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l 140 (456)
..+...++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++||+ .|+.++.++|.++|+++++.|
T Consensus 8 ~~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l 85 (508)
T 3r64_A 8 AGIDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQA--EWAATPAAERSAIIYRAAELL 85 (508)
T ss_dssp TTBCTTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHH
T ss_pred CCccccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHH
Confidence 445567899999999887889999999999999999999999999999999999999 899999999999999999999
Q ss_pred HhcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCC--CCceEEEEEccceEEEEEcCcChhHH
Q 012802 141 ERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD--GPYHVQTLHEPIGVAGQIIPWNFPLL 218 (456)
Q Consensus 141 ~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~i~p~n~P~~ 218 (456)
+++.++|++++++|+|||..+++. |+..+++.++|++.+.++..+ ..+.. .+...++.++|+|||++|+|||||+.
T Consensus 86 ~~~~~ela~~~~~e~Gk~~~~a~~-Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~ 163 (508)
T 3r64_A 86 EEHREEIVEWLIKESGSTRSKANL-EITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLN 163 (508)
T ss_dssp HHTHHHHHHHHHHTSCCCHHHHHH-HHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHH
T ss_pred HHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHH
Confidence 999999999999999999999876 999999999999998877665 44322 35678899999999999999999999
Q ss_pred HHHHHHhhhhhcCCEEEeecCCCChhHH-HHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHH
Q 012802 219 MFAWKVGPALACGNTIVLKTAEQTPLSA-LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 297 (456)
Q Consensus 219 ~~~~~l~~ALaaGN~VVlkps~~~p~~~-~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~ 297 (456)
..++++++||++||+||+|||+.+|+++ .++++++.++|+|+|++|+|+|++.+.+..|++||+||+|+||||+.+|+.
T Consensus 164 ~~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~ 243 (508)
T 3r64_A 164 LSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRR 243 (508)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHH
T ss_pred HHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHH
Confidence 9999999999999999999999999999 999999999999999999999977889999999999999999999999999
Q ss_pred HHHHHhhC-CCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhccc
Q 012802 298 VLQLAAKS-NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 376 (456)
Q Consensus 298 i~~~aa~~-~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~ 376 (456)
|++.++++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++
T Consensus 244 i~~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 323 (508)
T 3r64_A 244 VGELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPT 323 (508)
T ss_dssp HHHHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCB
T ss_pred HHHHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccC
Confidence 99988742 58999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 377 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 377 G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
|+|+++++++||+++..+++++.++|++++++|+++++||.. +|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 324 G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 400 (508)
T 3r64_A 324 GDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKAD 400 (508)
T ss_dssp SCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE---ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEES
T ss_pred CCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC---CCcEEecEEEecCCCCChhhcccccCceEEEEEeC
Confidence 999999999999999999999999999999999999999975 58999999999999999999999999999999996
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-84 Score=675.00 Aligned_cols=375 Identities=30% Similarity=0.532 Sum_probs=353.0
Q ss_pred ceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHH
Q 012802 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI 147 (456)
Q Consensus 68 ~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~l 147 (456)
+||||+|+.+ ++ ++++||+||+++++++.++.+|+++++++|++||. .|+.++..+|.++|+++++.|+++.++|
T Consensus 2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el 76 (486)
T 3pqa_A 2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKE--VMKNLPITKRYNILMNIAKQIKEKKEEL 76 (486)
T ss_dssp -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHH--HHHTCCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999974 45 99999999999999999999999999999999999 8999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhh
Q 012802 148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 227 (456)
Q Consensus 148 a~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 227 (456)
++++++|+|||..+++ .|+..+++.++|++++++++.+...+.+ +...++.++|+|||++|+|||||+.+.++++++|
T Consensus 77 a~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 154 (486)
T 3pqa_A 77 AKILAIDAGKPIKQAR-VEVERSIGTFKLAAFYVKEHRDEVIPSD-DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPA 154 (486)
T ss_dssp HHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCCEEEECCT-TEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCceecCC-CceeEEEEccccEEEEECCCchHHHHHHHHHHHH
Confidence 9999999999999987 4999999999999999988766555443 5678899999999999999999999999999999
Q ss_pred hhcCCEEEeecCCCChhHHHHHHHHHHHc----CCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHh
Q 012802 228 LACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (456)
Q Consensus 228 LaaGN~VVlkps~~~p~~~~~l~~~l~~a----GlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa 303 (456)
|++||+||+|||+.+|+++.++++++.++ |+|+|++|+|+|++.+++..|+.||+||+|+||||+.+|+.|++.++
T Consensus 155 LaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa 234 (486)
T 3pqa_A 155 IATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG 234 (486)
T ss_dssp HHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC
T ss_pred HHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC
Confidence 99999999999999999999999999999 99999999999988888999999999999999999999999999875
Q ss_pred hCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCC
Q 012802 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (456)
Q Consensus 304 ~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 383 (456)
+||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|++
T Consensus 235 ---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 311 (486)
T 3pqa_A 235 ---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEK 311 (486)
T ss_dssp ---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred ---CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 384 ~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++||+++..+++++.++|++++++|+++++||.. .|+|++|||+ +++++|++++||+||||++|++|+
T Consensus 312 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~ 380 (486)
T 3pqa_A 312 TDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTN 380 (486)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEEC
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCcEeccEEE-eCCCCChhhcccccccEEEEEEEc
Confidence 99999999999999999999999999999999965 5899999999 999999999999999999999996
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-84 Score=678.52 Aligned_cols=384 Identities=34% Similarity=0.553 Sum_probs=362.3
Q ss_pred cCceecCEeeeCCCCCeeeeecCC-CCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 012802 66 TQLLINGQFVDSASGKTFPTLDPR-TGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (456)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~-tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (456)
+++||||+|+. ++++++++||+ ||+++++++.++.+|+++++++|++||. .|+.++..+|.++|+++++.|++++
T Consensus 38 ~~~~i~G~~~~--~~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 113 (516)
T 1uzb_A 38 YPLYIGGEWVD--TKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWKDWPQEDRSRLLLKAAALMRRRK 113 (516)
T ss_dssp ECEEETTEEEC--CSSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred cceeECCEEec--CCCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 47899999996 35789999999 6999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccC--CCCCceEEEEEccceEEEEEcCcChhHHHHHH
Q 012802 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP--ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (456)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (456)
++|++++++|+|||+.++. .|+..+++.++||+++++++.+...+ ...+...++.++|+|||++|+|||||+.+.++
T Consensus 114 ~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 192 (516)
T 1uzb_A 114 RELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTG 192 (516)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHHH
Confidence 9999999999999999987 59999999999999998888765432 22345678999999999999999999999999
Q ss_pred HHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHH
Q 012802 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (456)
Q Consensus 223 ~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~a 302 (456)
++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++..|++|++||+|+||||+.+|+.|++.+
T Consensus 193 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~a 272 (516)
T 1uzb_A 193 MIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAA 272 (516)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999997788999999999999999999999999999998
Q ss_pred hh-----CCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccC
Q 012802 303 AK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 377 (456)
Q Consensus 303 a~-----~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G 377 (456)
+. +++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|
T Consensus 273 a~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 352 (516)
T 1uzb_A 273 GRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVG 352 (516)
T ss_dssp TSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBS
T ss_pred hhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCC
Confidence 81 3799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 378 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 378 ~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+| ++++++||+++..+++++.++|++++++| ++++||.....+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 353 ~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 429 (516)
T 1uzb_A 353 PA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVK 429 (516)
T ss_dssp CG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred CC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeC
Confidence 99 99999999999999999999999999999 8999997533469999999999999999999999999999999996
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-84 Score=672.90 Aligned_cols=371 Identities=27% Similarity=0.456 Sum_probs=356.9
Q ss_pred CeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChh
Q 012802 81 KTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE 160 (456)
Q Consensus 81 ~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 160 (456)
++++++||+||+++++++.++.+|+++++++|++||. .|+.++..+|.++|+++++.|+++.++|++++++|+|||+.
T Consensus 4 ~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 81 (484)
T 3ros_A 4 SKYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYK--KWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLS 81 (484)
T ss_dssp CCCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHH
T ss_pred CccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH
Confidence 3589999999999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred hhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCC
Q 012802 161 QSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAE 240 (456)
Q Consensus 161 ~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~ 240 (456)
+++ .|+..+++.++|+++++++..+...+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 82 ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~ 160 (484)
T 3ros_A 82 ESK-EEVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAH 160 (484)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHHHHTSCEEECCTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCT
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHhcCCeeccCCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 988 5999999999999999988877655444567889999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCce
Q 012802 241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPF 320 (456)
Q Consensus 241 ~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~ 320 (456)
.+|+++..+++++.++|+|+|++|+|+|++.+.+. |+.||+||+|+||||+.+|+.|++.+++ ++||+++|||||||+
T Consensus 161 ~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~-~lk~v~lELGGk~p~ 238 (484)
T 3ros_A 161 NVPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGK-NLKKSTMELGGNDAF 238 (484)
T ss_dssp TCHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHH-TTCEEEEECCCCCEE
T ss_pred CChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhc-cCCceEeecCCCCcc
Confidence 99999999999999999999999999998878888 9999999999999999999999999998 899999999999999
Q ss_pred EeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHH
Q 012802 321 IVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 400 (456)
Q Consensus 321 iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~ 400 (456)
||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+++++++||+++..+++++.+
T Consensus 239 iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~ 318 (484)
T 3ros_A 239 IVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEA 318 (484)
T ss_dssp EECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHH
T ss_pred eeCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 401 YIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 401 ~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+|++++++|+++++||...+.+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 319 ~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 374 (484)
T 3ros_A 319 QVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVE 374 (484)
T ss_dssp HHHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEES
T ss_pred HHHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcC
Confidence 99999999999999998655689999999999999999999999999999999996
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-84 Score=673.84 Aligned_cols=386 Identities=32% Similarity=0.530 Sum_probs=364.1
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 012802 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (456)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (456)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||. .|+.++.++|.++|+++++.|++++
T Consensus 5 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 82 (486)
T 1t90_A 5 KLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFK--TWSKVAVPRRARILFNFQQLLSQHK 82 (486)
T ss_dssp BCCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHTTH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHH
Confidence 35789999999876778999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccC-CCCCceEEEEEccceEEEEEcCcChhHHHHHHH
Q 012802 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (456)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (456)
++|++++++|+|||+.++. .|+..+++.++|++.+.+.+.+...+ ...+...+++++|+|||++|+|||||+...+++
T Consensus 83 ~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 161 (486)
T 1t90_A 83 EELAHLITIENGKNTKEAL-GEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWM 161 (486)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHHH
Confidence 9999999999999999886 59999999999999877776655432 123456788999999999999999999999999
Q ss_pred HhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHh
Q 012802 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (456)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa 303 (456)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+| +.+.+..|++|++||+|+||||+.+|+.|++.++
T Consensus 162 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa 240 (486)
T 1t90_A 162 FPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGS 240 (486)
T ss_dssp HHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999998 5578999999999999999999999999999998
Q ss_pred hCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCce-eEeccchHHHHHHHHHHHhhhcccCCCCCC
Q 012802 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR-TFVHESVYDQFVEKANALAMKRVVGDPFKG 382 (456)
Q Consensus 304 ~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~-v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~ 382 (456)
+ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++| ||||++ ||+|+++|.++++++++|+|+++
T Consensus 241 ~-~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~ 318 (486)
T 1t90_A 241 E-NLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDD 318 (486)
T ss_dssp H-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTST
T ss_pred c-cCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCcc
Confidence 7 89999999999999999999999999999999999999999999999 999999 99999999999999999999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCccc-CCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL-GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 383 ~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~-~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++++||+++..+++++.++|++++++|+++++||... .++|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 319 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~ 393 (486)
T 1t90_A 319 GVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVK 393 (486)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeC
Confidence 9999999999999999999999999999999999743 2369999999999999999999999999999999996
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-83 Score=670.14 Aligned_cols=379 Identities=31% Similarity=0.489 Sum_probs=358.9
Q ss_pred cCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHH
Q 012802 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (456)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (456)
+++||||+|+.+.+ +++++||+||+++++++.++.+|++++++.|++||. .|+.++.++|.++|+++++.|+++.+
T Consensus 5 ~~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 80 (475)
T 1euh_A 5 YKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQP--AWRALSYIERAAYLHKVADILMRDKE 80 (475)
T ss_dssp CCEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHhHH
Confidence 47899999997544 899999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCC-CC----ceE-EEEEccceEEEEEcCcChhHHH
Q 012802 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GP----YHV-QTLHEPIGVAGQIIPWNFPLLM 219 (456)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~----~~~-~~~~~P~GVv~~i~p~n~P~~~ 219 (456)
+|++++++|+|||+.++. .|+..+++.++|+++++++..+...+.. .+ ... ++.++|+|||++|+|||||+..
T Consensus 81 ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 159 (475)
T 1euh_A 81 KIGAILSKEVAKGYKSAV-SEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNL 159 (475)
T ss_dssp HHHHHHHHHHTCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchHHH
Confidence 999999999999999986 5999999999999998887655543321 23 456 8999999999999999999999
Q ss_pred HHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHH
Q 012802 220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299 (456)
Q Consensus 220 ~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~ 299 (456)
.++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+.+..|..|++||+|+||||+.+|+.|+
T Consensus 160 ~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~ 239 (475)
T 1euh_A 160 AGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIG 239 (475)
T ss_dssp HHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999997777899999999999999999999999999
Q ss_pred HHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCC
Q 012802 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379 (456)
Q Consensus 300 ~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p 379 (456)
+.++ +||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|||
T Consensus 240 ~~aa---~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 316 (475)
T 1euh_A 240 KMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNP 316 (475)
T ss_dssp HHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCG
T ss_pred HhcC---CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCc
Confidence 9876 7999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 380 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 380 ~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
.+ ++++||+++..+++++.++|++++++|+++++||.. .|+|++||||.+++++|++++||+||||++|++|+
T Consensus 317 ~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~---~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~ 389 (475)
T 1euh_A 317 ED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVT 389 (475)
T ss_dssp GG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred cc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCceeCCEEEeCCCCcCHHHcCccccceEEEEecC
Confidence 99 999999999999999999999999999999999965 48999999999999999999999999999999996
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-84 Score=674.03 Aligned_cols=385 Identities=36% Similarity=0.617 Sum_probs=365.1
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 012802 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (456)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (456)
..++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++||+ .|+.++..+|.++|+++++.|+++.
T Consensus 7 ~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 84 (478)
T 3ty7_A 7 YTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYL--EFRHTSVKERQALLDKIVKEYENRK 84 (478)
T ss_dssp CCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred hhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhH
Confidence 46899999999988889999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHH
Q 012802 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (456)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 224 (456)
++|++++++|+|||+.++...|+..+++.++|+++++++..+... ....++.++|+|||++|+|||||+...++++
T Consensus 85 ~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 160 (478)
T 3ty7_A 85 DDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER----RGDDLVVKEAIGVSGLITPWNFPTNQTSLKL 160 (478)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE----ETTEEEEEEECCCEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC----CccceEEecCceEEEEECCCcchHHHHHHHH
Confidence 999999999999999998567999999999999999887765432 2357889999999999999999999999999
Q ss_pred hhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhh
Q 012802 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304 (456)
Q Consensus 225 ~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~ 304 (456)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.+++..|..||+||+|+||||+.+|+.|++.+++
T Consensus 161 ~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa~ 240 (478)
T 3ty7_A 161 AAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAK 240 (478)
T ss_dssp HHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTTT
T ss_pred HHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999888899999999999999999999999999999887
Q ss_pred CCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCC
Q 012802 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384 (456)
Q Consensus 305 ~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 384 (456)
+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|+++++
T Consensus 241 -~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 319 (478)
T 3ty7_A 241 -DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGT 319 (478)
T ss_dssp -TTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTC
T ss_pred -cCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccC---CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 385 ~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~---~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++||+++..+++++.++|++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 320 ~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~ 394 (478)
T 3ty7_A 320 QVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYN 394 (478)
T ss_dssp CBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred ccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecC
Confidence 999999999999999999999999999999994321 479999999999999999999999999999999996
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-83 Score=672.61 Aligned_cols=381 Identities=28% Similarity=0.424 Sum_probs=360.9
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 012802 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (456)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (456)
.+++||||+|+.+. ++++++||+||+++++++.++.+|+++++++|++||.. .|+.++.++|.++|+++++.|++++
T Consensus 18 ~~~~~i~g~~~~~~--~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~-~w~~~~~~~R~~~L~~~a~~l~~~~ 94 (501)
T 1uxt_A 18 VYPSYLAGEWGGSG--QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRW-SARDMPGTERLAVLRKAADIIERNL 94 (501)
T ss_dssp EECEECSSSEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHH-HHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhh-hhccCCHHHHHHHHHHHHHHHHHhH
Confidence 45789999999753 78999999999999999999999999999999999962 4999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCC---CC--CceEEEEEccceEEEEEcCcChhHHH
Q 012802 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA---DG--PYHVQTLHEPIGVAGQIIPWNFPLLM 219 (456)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~---~~--~~~~~~~~~P~GVv~~i~p~n~P~~~ 219 (456)
++|++++++|+|||+.++. .|+..+++.++|+++++++..+...+. .. +...++.++|+|||++|+|||||+.+
T Consensus 95 ~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 173 (501)
T 1uxt_A 95 DVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFD 173 (501)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccHHHH
Confidence 9999999999999999987 599999999999999988876654443 22 34678999999999999999999999
Q ss_pred HHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHH
Q 012802 220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299 (456)
Q Consensus 220 ~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~ 299 (456)
.++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++ +++..|..|++||+|+||||+.+|+.|+
T Consensus 174 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~FTGS~~~G~~i~ 252 (501)
T 1uxt_A 174 AVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGERVV 252 (501)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEEEeCcHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999977 8899999999999999999999999999
Q ss_pred HHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCC
Q 012802 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379 (456)
Q Consensus 300 ~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p 379 (456)
+.++ +||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|||
T Consensus 253 ~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 329 (501)
T 1uxt_A 253 KVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDP 329 (501)
T ss_dssp HHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCT
T ss_pred HhcC---CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCc
Confidence 9876 7999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCC-ceEecEEEeeCC---CCCcccccccccceeEEEEe
Q 012802 380 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG-YYIKPTVFTGVK---DDMLIAKDEIFGPVQSILKY 455 (456)
Q Consensus 380 ~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g-~~~~PTvl~~v~---~~~~i~~~EifGPvl~v~~~ 455 (456)
+|+++++||+++..+++++.++|++++++|+++++||.. .| +|++|||+.+++ ++|++++||+||||++|++|
T Consensus 330 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~---~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~ 406 (501)
T 1uxt_A 330 RDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR---LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEV 406 (501)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB---CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEE
T ss_pred cccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEee
Confidence 999999999999999999999999999999999999975 58 999999999999 99999999999999999999
Q ss_pred C
Q 012802 456 K 456 (456)
Q Consensus 456 ~ 456 (456)
+
T Consensus 407 ~ 407 (501)
T 1uxt_A 407 K 407 (501)
T ss_dssp S
T ss_pred C
Confidence 6
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-83 Score=666.77 Aligned_cols=384 Identities=30% Similarity=0.419 Sum_probs=363.5
Q ss_pred cCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHH
Q 012802 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (456)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (456)
.++||||+|+.+. +.++.++||+||+++++++.++.+|++++++.|++||. .|+.++.++|.++|+++++.|+++++
T Consensus 6 ~~~~I~G~~~~~~-~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 82 (490)
T 3ju8_A 6 STHYIAGQWLAGQ-GETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFP--AWARRPLEQRIELLERFAATLKSRAD 82 (490)
T ss_dssp CCEEETTEEECCC-SCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cCceECCEEecCC-CCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 3789999999753 57899999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHh
Q 012802 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225 (456)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 225 (456)
+|++++++|+|||+.+++ .|+..+++.++|++.+.++..+...+...+...++.++|+|||++|+|||||+...+++++
T Consensus 83 ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 161 (490)
T 3ju8_A 83 ELARVIGEETGKPLWESA-TEVTSMVNKVAISVQAFRERTGEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIV 161 (490)
T ss_dssp HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHSCCEEEEETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccCCCCeeeEEECCCCEEEEECCCcchHHHHHHHHH
Confidence 999999999999999987 5999999999999998888776654322344567789999999999999999999999999
Q ss_pred hhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhC
Q 012802 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305 (456)
Q Consensus 226 ~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~ 305 (456)
+||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+| +.+.+..|+.|++||+|+||||+.+|+.|++.+++
T Consensus 162 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~- 239 (490)
T 3ju8_A 162 PALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGG- 239 (490)
T ss_dssp HHHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTT-
T ss_pred HHHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhc-
Confidence 9999999999999999999999999999999999999999999 67889999999999999999999999999999887
Q ss_pred CCCcE-EEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccch-HHHHHHHHHHHhhhcccCC-CCCC
Q 012802 306 NLKPV-TLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV-YDQFVEKANALAMKRVVGD-PFKG 382 (456)
Q Consensus 306 ~~~pv-~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i-~d~f~~~l~~~~~~~~~G~-p~~~ 382 (456)
+++|+ ++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++ ||+|+++|+++++++++|+ |.|+
T Consensus 240 ~~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~ 319 (490)
T 3ju8_A 240 QPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQP 319 (490)
T ss_dssp CTTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSS
T ss_pred cCCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCC
Confidence 88998 8999999999999999999999999999999999999999999999996 9999999999999999999 9999
Q ss_pred CCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 383 ~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++++||+++..+++++.++|++++++|+++++||...+.+|+|++|||+. ++++|++++||+||||++|++|+
T Consensus 320 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~ 392 (490)
T 3ju8_A 320 APFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYS 392 (490)
T ss_dssp CCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEES
T ss_pred cCccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeC
Confidence 99999999999999999999999999999999998766689999999999 99999999999999999999996
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-83 Score=673.83 Aligned_cols=387 Identities=27% Similarity=0.386 Sum_probs=362.7
Q ss_pred CccCceecCEeeeCCCCCeeeeecCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHh
Q 012802 64 DYTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (456)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~ 142 (456)
..+++||||+|+.+. .++.++||.| |+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|+++++.|++
T Consensus 62 ~~~~~~I~G~~~~~~--~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~~ 137 (563)
T 4e3x_A 62 EAIPCVVGDEEVWTS--DIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARK--EWDLKPMADRAQVFLKAADMLSG 137 (563)
T ss_dssp EECCEEETTEEECCS--CEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHT
T ss_pred ccCCeEECCEEeecC--CceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHh
Confidence 457899999999743 4678999998 799999999999999999999999999 89999999999999999999999
Q ss_pred c-HHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccC-CCCCceEEEEEccceEEEEEcCcChhHHHH
Q 012802 143 H-NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220 (456)
Q Consensus 143 ~-~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~ 220 (456)
+ +++|+.++++|+|||+.++...++..+++.++|++.+++++.+.... .+.+...+.++.|+|||++|+|||||+...
T Consensus 138 ~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~~ 217 (563)
T 4e3x_A 138 PRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGG 217 (563)
T ss_dssp TTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHHH
T ss_pred ccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHHH
Confidence 9 99999999999999999987645999999999999999888764332 222344567778889999999999999999
Q ss_pred HHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHH
Q 012802 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (456)
Q Consensus 221 ~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~ 300 (456)
.+++++|| +||+||+|||+.+|+++..++++|.++|+|+|+||+|+|++.++++.|+.||+|++|+||||+.+|+.|++
T Consensus 218 ~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~ 296 (563)
T 4e3x_A 218 NLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWR 296 (563)
T ss_dssp HHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence 99999999 59999999999999999999999999999999999999988889999999999999999999999999999
Q ss_pred HHhhCCCC------cEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhc
Q 012802 301 LAAKSNLK------PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 374 (456)
Q Consensus 301 ~aa~~~~~------pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~ 374 (456)
.+++ +++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|.++++++
T Consensus 297 ~aa~-~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l 375 (563)
T 4e3x_A 297 QVAQ-NLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRI 375 (563)
T ss_dssp HHHH-TTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTC
T ss_pred HHHh-hCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhc
Confidence 9988 777 499999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCC-CCCCCccccCCCHHHHHHHHHHHHHHhh-CCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEE
Q 012802 375 VVGDP-FKGGIQQGPQIDSEQFEKILKYIRSGVD-GGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSI 452 (456)
Q Consensus 375 ~~G~p-~~~~~~~Gp~i~~~~~~~~~~~i~~a~~-~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v 452 (456)
++||| +|+++++||+++..+++++.++|+++++ +|+++++||...+.+|+|++|||+.+++++|++++||+||||++|
T Consensus 376 ~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V 455 (563)
T 4e3x_A 376 KVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTV 455 (563)
T ss_dssp CBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEEE
T ss_pred cCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEEE
Confidence 99999 9999999999999999999999999996 899999999876668999999999999999999999999999999
Q ss_pred EEeC
Q 012802 453 LKYK 456 (456)
Q Consensus 453 ~~~~ 456 (456)
++|+
T Consensus 456 ~~~~ 459 (563)
T 4e3x_A 456 YVYP 459 (563)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9995
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-81 Score=648.94 Aligned_cols=373 Identities=29% Similarity=0.468 Sum_probs=355.0
Q ss_pred CCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCC
Q 012802 79 SGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKP 158 (456)
Q Consensus 79 ~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~ 158 (456)
+..+++++||+||+++++++.++.+|+++++++|++||. .|+.++..+|.++|+++++.|+++.++|+++++.|+|||
T Consensus 5 s~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 82 (462)
T 3etf_A 5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFK--KWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKP 82 (462)
T ss_dssp -CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC
T ss_pred ccCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 446789999999999999999999999999999999999 899999999999999999999999999999999999999
Q ss_pred hhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeec
Q 012802 159 FEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 238 (456)
Q Consensus 159 ~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkp 238 (456)
+.+++. |+..+++.++|++++.++..+.......+...+++++|+|||++|+|||||+...++++++||++||+||+||
T Consensus 83 ~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKp 161 (462)
T 3etf_A 83 IKQARA-EVTKSAALCDWYAEHGPAMLNPEPTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKH 161 (462)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHHHHHHTSCEECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHH-HHHHHHHHHHHHHHhHHHhcCCcccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEEC
Confidence 999874 9999999999999998887665432223567889999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCC
Q 012802 239 AEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS 318 (456)
Q Consensus 239 s~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~ 318 (456)
|+.+|+++.++++++.++|+|+|++|+|+| +.+.+..|+.|++|+.|+||||+.+|+.|++.+++ +++|+++|+||||
T Consensus 162 s~~tp~~~~~l~~~l~~aglP~gv~~vv~g-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~-~~~~v~lElGGk~ 239 (462)
T 3etf_A 162 APNVTGCAQMIARILAEAGTPAGVYGWVNA-NNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGGSD 239 (462)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCBTTEEECCC-CHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHH-TTCCEEEECCCCE
T ss_pred CCCCcHHHHHHHHHHHHhCCCcCeEEEEEC-CHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhc-cCCceEEEcCCCC
Confidence 999999999999999999999999999998 45678899999999999999999999999999998 8999999999999
Q ss_pred ceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHH
Q 012802 319 PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 398 (456)
Q Consensus 319 ~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~ 398 (456)
|+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.++++++||+++..+++++
T Consensus 240 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v 319 (462)
T 3etf_A 240 PFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDEL 319 (462)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHH
T ss_pred ccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 399 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 399 ~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
.++|++++++|+++++||...+.+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 320 ~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~ 377 (462)
T 3etf_A 320 HQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAK 377 (462)
T ss_dssp HHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred HHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcC
Confidence 9999999999999999998665689999999999999999999999999999999996
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-80 Score=687.59 Aligned_cols=386 Identities=31% Similarity=0.512 Sum_probs=365.9
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 012802 65 YTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (456)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (456)
..++||||+|+. ++++++++||+| ++++++++.++.+|+++|+++|++||. .|+.++..+|.++|+++++.|+++
T Consensus 531 ~~~~~I~G~~~~--~~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eRa~iL~~~Adll~~~ 606 (1026)
T 4f9i_A 531 TYPLFINGKEVR--TNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFP--AWRDTDPRTRAEYLLKAAQAARKR 606 (1026)
T ss_dssp EECEEETTEEEC--CSCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccCceECCEEec--CCCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHHH
Confidence 468999999996 467899999998 999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCC-CCCceEEEEEccceEEEEEcCcChhHHHHHH
Q 012802 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (456)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (456)
+++|+.++++|+|||+.++.. |+..+++.++||+.+++++.+...+. ..+..+++.++|+|||++|+|||||+.+.++
T Consensus 607 ~~eLa~~~~~E~GK~~~ea~~-Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~ 685 (1026)
T 4f9i_A 607 LFELSAWQVLEIGKQWDQAYA-DVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMG 685 (1026)
T ss_dssp HHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHHhCCChhhHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHHH
Confidence 999999999999999999875 99999999999999998876554332 3466788999999999999999999999999
Q ss_pred HHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHH
Q 012802 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (456)
Q Consensus 223 ~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~a 302 (456)
++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++..|++||+|++|+||||+.+|+.|++.+
T Consensus 686 ~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~a 765 (1026)
T 4f9i_A 686 MASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERA 765 (1026)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999998
Q ss_pred hh-----CCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccC
Q 012802 303 AK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 377 (456)
Q Consensus 303 a~-----~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G 377 (456)
+. +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|
T Consensus 766 a~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG 845 (1026)
T 4f9i_A 766 AKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVG 845 (1026)
T ss_dssp TSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBC
T ss_pred hcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccC
Confidence 73 3689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 378 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 378 ~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+|.++++++||+|+..+++++.++|++++++| ++++||.....+|+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 846 ~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~ 923 (1026)
T 4f9i_A 846 PSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAK 923 (1026)
T ss_dssp CTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred CcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeC
Confidence 99999999999999999999999999999999 9999997644459999999999999999999999999999999985
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-79 Score=649.15 Aligned_cols=381 Identities=25% Similarity=0.359 Sum_probs=347.8
Q ss_pred cCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 012802 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKA-FDEGPWPRMTAYERSKIILRFADLLERHN 144 (456)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A-~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (456)
.++||||+|+.+.+ .+++++||+||+++++++.++ +|+++|+++|++| |+ .|+.++..+|.++|+++++.|++++
T Consensus 8 ~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (534)
T 2y53_A 8 LKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGA--ALRALTYAQRAARLADIVKLLQAKR 83 (534)
T ss_dssp CCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred hhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhh--hhhhCCHHHHHHHHHHHHHHHHHhH
Confidence 57899999997544 579999999999999999988 9999999999999 58 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcc-------cCCC--CCceEEEEEccc-eEEEEEcCcC
Q 012802 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT-------APAD--GPYHVQTLHEPI-GVAGQIIPWN 214 (456)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~-------~~~~--~~~~~~~~~~P~-GVv~~i~p~n 214 (456)
++|++++++|+|||+.++.. |+..+++.++||+.+++++.+.. .+.. .....+..++|+ |||++|+|||
T Consensus 84 ~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN 162 (534)
T 2y53_A 84 GDYYAIATANSGTTRNDSAV-DIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFN 162 (534)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTT
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCc
Confidence 99999999999999999874 99999999999999887764321 1221 222467889997 9999999999
Q ss_pred hhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcC-CCCCeEEEecCCchHHHHHHHcC-CCccEEEEeCCh
Q 012802 215 FPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASH-MEVDKLAFTGST 292 (456)
Q Consensus 215 ~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aG-lP~gvv~vv~g~~~~~~~~L~~~-~~v~~V~ftGS~ 292 (456)
||+.+.++++++||++||+||+|||+.+|+++..+++++.++| +|+|++|+|+|++.+ +..+ +++|+|+||||+
T Consensus 163 ~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~----l~~~l~~vd~V~FTGS~ 238 (534)
T 2y53_A 163 FPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAG----LLDQIRSFDVVSFTGSA 238 (534)
T ss_dssp CTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTT----SGGGCCTTCEEEEESCH
T ss_pred hHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHH----HHhcccccCEEEEECCH
Confidence 9999999999999999999999999999999999999999999 899999999986543 3333 579999999999
Q ss_pred HHHHHHHHHHh-hCCCCcEEEecCCCCceEeccCC-----CHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHH
Q 012802 293 TTGKIVLQLAA-KSNLKPVTLELGGKSPFIVCEDA-----DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEK 366 (456)
Q Consensus 293 ~~g~~i~~~aa-~~~~~pv~lelgG~~~~iV~~da-----D~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~ 366 (456)
.+|+.|++.++ ..++||+++|||||||+||++|| |+|.|++.+++++|.|+||.|++++|||||+++||+|+++
T Consensus 239 ~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~ 318 (534)
T 2y53_A 239 DTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEA 318 (534)
T ss_dssp HHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHH
T ss_pred HHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHH
Confidence 99999998774 23899999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCccc------CCCCceEecEEEeeCCCC--C
Q 012802 367 ANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL------GAKGYYIKPTVFTGVKDD--M 438 (456)
Q Consensus 367 l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~------~~~g~~~~PTvl~~v~~~--~ 438 (456)
|+++++++++|||+|+++++||++++.+++++.++|+++ .+|+++++||... ..+|+|++||||.+++++ |
T Consensus 319 l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~ 397 (534)
T 2y53_A 319 LKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNAT 397 (534)
T ss_dssp HHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCS
T ss_pred HHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccC
Confidence 999999999999999999999999999999999999999 6899999999642 136999999999999987 6
Q ss_pred cccccccccceeEEEEeC
Q 012802 439 LIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 439 ~i~~~EifGPvl~v~~~~ 456 (456)
.+++||+||||++|++|+
T Consensus 398 ~i~~eEiFGPVl~v~~~~ 415 (534)
T 2y53_A 398 LLHDVEVFGPVASVAPYR 415 (534)
T ss_dssp STTTCCCSSSEEEEEEEC
T ss_pred HHHhCCCcCCEEEEEEEC
Confidence 999999999999999996
|
| >4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-79 Score=640.47 Aligned_cols=371 Identities=28% Similarity=0.402 Sum_probs=347.3
Q ss_pred CCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCC
Q 012802 78 ASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGK 157 (456)
Q Consensus 78 ~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk 157 (456)
...+|++++||+||+++++++.++.+|+++|+++|++||+ .|++++.++|.++|+++++.|++|+++|++++++|+||
T Consensus 3 a~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk 80 (474)
T 4h7n_A 3 AMTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQS--RWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGR 80 (474)
T ss_dssp CCCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHH--HHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSC
T ss_pred CCCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4568999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred ChhhhhccchHHHHHHHHHHHHHhHhhcCccc-C-CCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEE
Q 012802 158 PFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA-P-ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIV 235 (456)
Q Consensus 158 ~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~-~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VV 235 (456)
+... . .|+...++.++||+.+..+...... . ...+...+..++|+|||++|+|||||+.+.++++++||++||+||
T Consensus 81 ~~~~-~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VV 158 (474)
T 4h7n_A 81 LSIT-V-LEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVV 158 (474)
T ss_dssp SHHH-H-HHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEE
T ss_pred cHHH-H-HHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCcee
Confidence 8644 3 4999999999999988877644322 2 123456677889999999999999999999999999999999999
Q ss_pred eecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecC
Q 012802 236 LKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG 315 (456)
Q Consensus 236 lkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelg 315 (456)
+|||+.+|+++..+++++.++|+|+|++|+++| +.+.+..|..| +|+|+||||+.+|+.|++.+++ ++||+++|||
T Consensus 159 lKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa~-~~~~v~lElG 234 (474)
T 4h7n_A 159 VKPSEIAPRFVAPLLMALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTGSVATGREVAETAAR-RFIPAYLELG 234 (474)
T ss_dssp EEECTTSCTTHHHHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHHH-HTCCEEEECC
T ss_pred ecccccCchHHHHHHhhhhhhcccccceeeccc-cchhhhhhhhc--cceEEeccccchhhhhhhhhhc-ccccccccCC
Confidence 999999999999999999999999999999999 56778888876 8999999999999999999988 8999999999
Q ss_pred CCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHH
Q 012802 316 GKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQF 395 (456)
Q Consensus 316 G~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~ 395 (456)
||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.+++.++++|+|.++++++||+++..++
T Consensus 235 Gk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~ 314 (474)
T 4h7n_A 235 GKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQA 314 (474)
T ss_dssp CCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHH
T ss_pred CcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCCEEEeCCcccC-CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 396 EKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 396 ~~~~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++.+++++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 315 ~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~ 376 (474)
T 4h7n_A 315 GIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFP 376 (474)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred HHHHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEEC
Confidence 9999999999999999999997643 578999999999999999999999999999999996
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-75 Score=608.24 Aligned_cols=361 Identities=25% Similarity=0.389 Sum_probs=322.1
Q ss_pred CeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChh
Q 012802 81 KTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE 160 (456)
Q Consensus 81 ~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 160 (456)
..+++.||+||+++++++.++.+|+++++++|++||. .|+.++.++|.++|+++++.|+++.++|++++++|+|||+.
T Consensus 6 ~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 83 (457)
T 3lns_A 6 HHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFA--TRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKD 83 (457)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHH
T ss_pred ccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH
Confidence 4578999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred hhhccchHHHHHHHHHHHHHhHhhcCcc-cCC---CCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEe
Q 012802 161 QSAQTEVPMTTRLFRYYAGWADKIQGLT-APA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVL 236 (456)
Q Consensus 161 ~a~~~ev~~~~~~l~~~a~~~~~~~~~~-~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVl 236 (456)
+++..|+..+++.++|+++..++..+.. .+. ..+...+++++|+|||++|+|||||+...++++++||++||+||+
T Consensus 84 ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVl 163 (457)
T 3lns_A 84 VVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCII 163 (457)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEE
Confidence 9876699999999999999887765421 211 134678899999999999999999999999999999999999999
Q ss_pred ecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCC
Q 012802 237 KTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGG 316 (456)
Q Consensus 237 kps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG 316 (456)
|||+.+|+++..+++++.++ +|+|++|+|+| +.+.+..|++ ++||+|+||||+.+|+.|++.+++ ++||+++|+||
T Consensus 164 Kps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa~-~l~pv~lElGG 239 (457)
T 3lns_A 164 KPSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAK-HLTPVVLELGG 239 (457)
T ss_dssp ECCTTCHHHHHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCC
T ss_pred ECCCCChHHHHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHhh-ccCceEEECCC
Confidence 99999999999999999998 99999999999 6778889998 689999999999999999999987 89999999999
Q ss_pred CCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHH
Q 012802 317 KSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFE 396 (456)
Q Consensus 317 ~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~ 396 (456)
|||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++ |.++ ++||+++..+++
T Consensus 240 k~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~ 314 (457)
T 3lns_A 240 KCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQVQ 314 (457)
T ss_dssp CEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHH
T ss_pred CCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999987 6666 999999999999
Q ss_pred HHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 397 KILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 397 ~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++.++|+++. +++++||... .+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 315 rv~~~i~~a~---~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 370 (457)
T 3lns_A 315 RLVSLLEATQ---GQVLVGSQAD-VSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFD 370 (457)
T ss_dssp HHHHHHHHCC---SEEEECCCEE-GGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEES
T ss_pred HHHHHHHhcC---CeEEeCCccC-CCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeC
Confidence 9999999863 5999999753 369999999999999999999999999999999996
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-75 Score=618.42 Aligned_cols=372 Identities=23% Similarity=0.321 Sum_probs=338.6
Q ss_pred CccCceecCEeeeCCCCCeeeeecCCCCCEEE-EEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHh
Q 012802 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVIT-HVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (456)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~-~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~ 142 (456)
+..++||||+|+.+.+ ++||+||++++ +++.++.+|+++++++|++||. .|+.++..+|.++|+++++.|++
T Consensus 28 ~~~~~~I~G~~~~~~~-----v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 100 (528)
T 3v4c_A 28 PKGKHLVAGEWLDGAG-----TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFW--TYGYSSRKERAAFLRAIADEIEA 100 (528)
T ss_dssp CCCCEEETTEEECCSS-----EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHH
T ss_pred cccCceECCEEecCCC-----ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHH
Confidence 3468999999997532 89999999998 9999999999999999999999 89999999999999999999999
Q ss_pred cHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhh--cCccc----CC---CCCceEEEEEccceEEEEEcCc
Q 012802 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI--QGLTA----PA---DGPYHVQTLHEPIGVAGQIIPW 213 (456)
Q Consensus 143 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~--~~~~~----~~---~~~~~~~~~~~P~GVv~~i~p~ 213 (456)
++++|++++++|+|||+.++. .|+..+++.++||++++++. .+... +. ..+...++.++|+|||++|+||
T Consensus 101 ~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~Pw 179 (528)
T 3v4c_A 101 RAEAITEIGSQETGLPEARLN-GERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGAS 179 (528)
T ss_dssp THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECCS
T ss_pred hHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECCC
Confidence 999999999999999999877 49999999999999988772 22211 11 1234578899999999999999
Q ss_pred ChhHHHHH--HHHhhhhhcCCEEEeecCCCChhHHHHHHHHH----HHcCCCCCeEEEecCCchHHHHHHHcCCCccEEE
Q 012802 214 NFPLLMFA--WKVGPALACGNTIVLKTAEQTPLSALYVSKLL----HEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLA 287 (456)
Q Consensus 214 n~P~~~~~--~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l----~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ 287 (456)
|||+.+.+ +++++||++||+||+|||+.+|+++..+++++ .++|+|+|++|+|+|++.+++..|+.||+||+|+
T Consensus 180 N~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~ 259 (528)
T 3v4c_A 180 NFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVG 259 (528)
T ss_dssp SSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEE
T ss_pred cchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEE
Confidence 99999865 99999999999999999999999999999875 4689999999999998888999999999999999
Q ss_pred EeCChHHHHHHHHHHhhCCC--CcEEEecCCCCceEeccCC---CHHHHHHHHHHHHhccCCCcccCCceeEeccc-hHH
Q 012802 288 FTGSTTTGKIVLQLAAKSNL--KPVTLELGGKSPFIVCEDA---DVDKAAELAHYALFFNQGQCCCAGSRTFVHES-VYD 361 (456)
Q Consensus 288 ftGS~~~g~~i~~~aa~~~~--~pv~lelgG~~~~iV~~da---D~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~-i~d 361 (456)
||||+.+|+.|++.+++ ++ ||+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++|||||++ +||
T Consensus 260 fTGS~~~G~~i~~~aa~-~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d 338 (528)
T 3v4c_A 260 FTGSLAGGRALFDLCAA-RPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADAD 338 (528)
T ss_dssp EESCHHHHHHHHHHHHH-SSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHHH
T ss_pred EECChHHHHHHHHHHhh-ccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHHH
Confidence 99999999999999988 77 9999999999999999999 88999999999999999999999999999997 999
Q ss_pred HHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCC---C
Q 012802 362 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDD---M 438 (456)
Q Consensus 362 ~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~---~ 438 (456)
+|+++|++++++++.| +.+||+++..+.+++.++++ ++|+++++||.. +|+|++|||+.+++++ |
T Consensus 339 ~f~~~l~~~~~~~~~~------~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~---~g~~~~PTvl~~~~~~~~~~ 406 (528)
T 3v4c_A 339 RFTTAAVEALAKVAPQ------TMLTDGIAKAYRDGQARFAT---RNAVKPLLATES---SGRDASPNLFETTGAQFLAD 406 (528)
T ss_dssp HHHHHHHHHHHTCCCE------ECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC---CTTEECCEEEEEEHHHHHHC
T ss_pred HHHHHHHHHHHhcccC------CCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc---CCceeccEEEEecCcccccC
Confidence 9999999999988643 67899999888888887764 489999999974 6999999999998888 9
Q ss_pred cccccccccceeEEEEeC
Q 012802 439 LIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 439 ~i~~~EifGPvl~v~~~~ 456 (456)
++++||+||||++|++|+
T Consensus 407 ~i~~eEiFGPVl~V~~~~ 424 (528)
T 3v4c_A 407 HALGEEVFGPLGLVVRVG 424 (528)
T ss_dssp GGGGCCCSSSEEEEEEES
T ss_pred hhhcccccCCeEEEEecC
Confidence 999999999999999996
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-74 Score=595.77 Aligned_cols=344 Identities=28% Similarity=0.396 Sum_probs=315.8
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHH
Q 012802 100 GEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179 (456)
Q Consensus 100 ~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~ 179 (456)
.+.+|+++++++|++||. .|+.++..+|.++|+++++.|+++.++|++++++|+|||+.++...|+..+++.++|++.
T Consensus 15 ~s~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~ 92 (469)
T 3sza_A 15 SHMSKISEAVKRARAAFS--SGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQ 92 (469)
T ss_dssp ---CHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 456799999999999999 999999999999999999999999999999999999999999876799999999998887
Q ss_pred HhHhhcCcc----cCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHH
Q 012802 180 WADKIQGLT----APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHE 255 (456)
Q Consensus 180 ~~~~~~~~~----~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~ 255 (456)
......... .....+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+++++.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~ 172 (469)
T 3sza_A 93 KLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQ 172 (469)
T ss_dssp HHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred HHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH
Confidence 665443211 1112245688999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHH
Q 012802 256 AGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELA 335 (456)
Q Consensus 256 aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i 335 (456)
+ +|+|++|+|+|++ +.+..|+.| +||+|+||||+.+|+.|++.+++ ++||+++|||||||+||++|||+|.|++.+
T Consensus 173 a-lP~gvv~vv~g~~-~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa~-~lkpv~lELGGk~p~iV~~dADl~~Aa~~i 248 (469)
T 3sza_A 173 Y-LDKDLYPVINGGV-PETTELLKE-RFDHILYTGSTGVGKIIMTAAAK-HLTPVTLELGGKSPCYVDKNCDLDVACRRI 248 (469)
T ss_dssp H-SCTTTSCBCCCSH-HHHHHHTTS-CCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCCCCEEEECTTSCHHHHHHHH
T ss_pred h-CCcceEEEEECCH-HHHHHHHhc-CCCEEEEECCHHHHHHHHHHHhh-ccCceEEecCCCCceEECCCCCHHHHHHHH
Confidence 8 9999999999954 445667777 89999999999999999999987 899999999999999999999999999999
Q ss_pred HHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeC
Q 012802 336 HYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETG 415 (456)
Q Consensus 336 ~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~g 415 (456)
++++|.|+||.|++++|||||+++||+|+++|.++++++ +|+|.++++++||+++..+++++.++| +|+++++|
T Consensus 249 ~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~G 322 (469)
T 3sza_A 249 AWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYG 322 (469)
T ss_dssp HHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEEC
T ss_pred HHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeC
Confidence 999999999999999999999999999999999999988 699999999999999999999999998 69999999
Q ss_pred CcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 416 GERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 416 g~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
|... ++|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 323 G~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 362 (469)
T 3sza_A 323 GTGD-AATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVR 362 (469)
T ss_dssp CCEE-TTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECS
T ss_pred CccC-CCCceeCCeeecCCCCcchhhhccccCCeEEEEecC
Confidence 9764 479999999999999999999999999999999986
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-74 Score=607.12 Aligned_cols=362 Identities=21% Similarity=0.310 Sum_probs=331.4
Q ss_pred CCCCCeeeeecCCCCCEE-EEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhc
Q 012802 77 SASGKTFPTLDPRTGDVI-THVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDN 155 (456)
Q Consensus 77 ~~~~~~~~v~~P~tge~i-~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~ 155 (456)
+.++++++++||+||+++ ++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++++++|++++++|+
T Consensus 3 ~~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~ 80 (510)
T 1ez0_A 3 PQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR--DFRRLNNSKRASLLRTIASELEARSDDIIARAHLET 80 (510)
T ss_dssp --CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 346788999999999999 79999999999999999999999 899999999999999999999999999999999999
Q ss_pred CCChhhhhccchHHHHHHHHHHHHHhHh--hcCccc----CC--CCC-ceEEEEEccceEEEEEcCcChhHHHH--HHHH
Q 012802 156 GKPFEQSAQTEVPMTTRLFRYYAGWADK--IQGLTA----PA--DGP-YHVQTLHEPIGVAGQIIPWNFPLLMF--AWKV 224 (456)
Q Consensus 156 Gk~~~~a~~~ev~~~~~~l~~~a~~~~~--~~~~~~----~~--~~~-~~~~~~~~P~GVv~~i~p~n~P~~~~--~~~l 224 (456)
|||+.++. .|+..+++.++||++++++ ..+... +. ..+ ...+++++|+|||++|+|||||+.+. .+++
T Consensus 81 Gk~~~~a~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 159 (510)
T 1ez0_A 81 ALPEVRLT-GEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDT 159 (510)
T ss_dssp CCCHHHHH-HHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHH
T ss_pred CCCHHHHH-HHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHH
Confidence 99998875 5999999999999998875 333221 11 111 24678999999999999999999985 4999
Q ss_pred hhhhhcCCEEEeecCCCChhHHHHHHHHH----HHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHH
Q 012802 225 GPALACGNTIVLKTAEQTPLSALYVSKLL----HEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (456)
Q Consensus 225 ~~ALaaGN~VVlkps~~~p~~~~~l~~~l----~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~ 300 (456)
++||++||+||+|||+.+|+++..+++++ .++|+|+|++|+|+|++.+++..|+.|++||+|+||||+.+|+.|++
T Consensus 160 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~ 239 (510)
T 1ez0_A 160 ASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFN 239 (510)
T ss_dssp HHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHH
Confidence 99999999999999999999999999998 56799999999999977789999999999999999999999999999
Q ss_pred HHhhCCC--CcEEEecCCCCceEeccCCCHH--HHHHHHHHHHhccCCCcccCCceeEeccc-hHHHHHHHHHHHhhhcc
Q 012802 301 LAAKSNL--KPVTLELGGKSPFIVCEDADVD--KAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRV 375 (456)
Q Consensus 301 ~aa~~~~--~pv~lelgG~~~~iV~~daD~d--~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~ 375 (456)
.+++ ++ ||+++|||||||+||++|||+| .|++.+++++|.|+||.|++++|||||++ +||+|+++|.+++++++
T Consensus 240 ~aa~-~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~ 318 (510)
T 1ez0_A 240 LAHE-RPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQS 318 (510)
T ss_dssp HHHH-SSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCC
T ss_pred Hhhc-cCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcC
Confidence 9987 64 9999999999999999999999 99999999999999999999999999999 99999999999999886
Q ss_pred cCCCCCCCCccccCCCHHHHHHHHHHHHHHhh-CCCEEEeCCcccCCCCceEecEEEeeCCCC---CcccccccccceeE
Q 012802 376 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD-GGAKLETGGERLGAKGYYIKPTVFTGVKDD---MLIAKDEIFGPVQS 451 (456)
Q Consensus 376 ~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~-~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~---~~i~~~EifGPvl~ 451 (456)
+ ||++++.+.+++.++|+++++ +|+++++||. .|+|++|||+.+++++ |++++||+||||++
T Consensus 319 ~----------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~----~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~ 384 (510)
T 1ez0_A 319 P----------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA----ESPCVASALFVTSSENWRKHPAWEEEIFGPQSL 384 (510)
T ss_dssp C----------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC----CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEE
T ss_pred C----------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC----CCCEecCEEEEecCCccccCHHHcCCccCCeEE
Confidence 4 688888999999999999984 8999999996 2899999999988888 99999999999999
Q ss_pred EEEeC
Q 012802 452 ILKYK 456 (456)
Q Consensus 452 v~~~~ 456 (456)
|++|+
T Consensus 385 v~~~~ 389 (510)
T 1ez0_A 385 IVVCE 389 (510)
T ss_dssp EEEES
T ss_pred EEEeC
Confidence 99996
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-72 Score=621.18 Aligned_cols=351 Identities=31% Similarity=0.466 Sum_probs=332.7
Q ss_pred EecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHH
Q 012802 97 VAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRY 176 (456)
Q Consensus 97 v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~ 176 (456)
++.++.+|+++|++.|++||. .|+.++..+|.++|+++++.|+++.++|+++++.|+|||+.++.. |+..+++.++|
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~~-Ev~~ai~~lr~ 620 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFA--GWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALS-ELREAADFCRY 620 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHH-HHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHH-HHHHHHHHHHH
Confidence 889999999999999999999 999999999999999999999999999999999999999999864 99999999999
Q ss_pred HHHHhHhhcCcc--cCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHH
Q 012802 177 YAGWADKIQGLT--APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH 254 (456)
Q Consensus 177 ~a~~~~~~~~~~--~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~ 254 (456)
|+.+.++..+.. .+...+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++..+++++.
T Consensus 621 ~a~~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~ 700 (1001)
T 3haz_A 621 YAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLH 700 (1001)
T ss_dssp HHHHHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred HHHHHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHH
Confidence 999998876643 333456788899999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhC--CCCcEEEecCCCCceEeccCCCHHHHH
Q 012802 255 EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS--NLKPVTLELGGKSPFIVCEDADVDKAA 332 (456)
Q Consensus 255 ~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~--~~~pv~lelgG~~~~iV~~daD~d~aa 332 (456)
++|+|+|++|+|+|++.+ +..|+.||+|++|+||||+.+|+.|++.++++ +++|+++|+|||||+||++|||++.|+
T Consensus 701 eAGlP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa 779 (1001)
T 3haz_A 701 EAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVA 779 (1001)
T ss_dssp HHTCCTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHH
T ss_pred HhCcCcCcEEEEecCchH-HHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHH
Confidence 999999999999998777 99999999999999999999999999998863 589999999999999999999999999
Q ss_pred HHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEE
Q 012802 333 ELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKL 412 (456)
Q Consensus 333 ~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v 412 (456)
+.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..+++++.++|++++++| ++
T Consensus 780 ~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v 858 (1001)
T 3haz_A 780 DDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL 858 (1001)
T ss_dssp HHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE
T ss_pred HHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888 88
Q ss_pred EeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 413 ETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 413 ~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+||... +.|+|++|||+.+ ++|.+++||+||||++|++|+
T Consensus 859 -~gg~~~-~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~ 898 (1001)
T 3haz_A 859 -HFAGPA-PEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYR 898 (1001)
T ss_dssp -EEECCC-CSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEEC
T ss_pred -eccccC-CCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeC
Confidence 888653 4699999999975 788999999999999999995
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-64 Score=525.19 Aligned_cols=333 Identities=18% Similarity=0.232 Sum_probs=287.9
Q ss_pred EecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhccchHHHHHHH-H
Q 012802 97 VAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLF-R 175 (456)
Q Consensus 97 v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l-~ 175 (456)
++.++.+|++++++.|++||+ .|+.++.++|.++|+++++.+++++++|+++++.|+|||+.++...|+..+.+.+ +
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~--~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~ 78 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQE--EFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYN 78 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 467899999999999999999 9999999999999999999999999999999999999999988755666666666 3
Q ss_pred HHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHH-
Q 012802 176 YYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH- 254 (456)
Q Consensus 176 ~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~- 254 (456)
++... +..+ ..+.+.+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.
T Consensus 79 ~~~~~--~~~g-~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~ 155 (452)
T 3my7_A 79 KYKDE--QTCG-ILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLD 155 (452)
T ss_dssp HHTTC--CCSE-EC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred Hhhhc--cccc-cccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHH
Confidence 44321 1111 1222334557889999999999999999999999999999999999999999999999999888875
Q ss_pred ---HcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEeccCCCHHHH
Q 012802 255 ---EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKA 331 (456)
Q Consensus 255 ---~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~a 331 (456)
++|+|+|++|+|++++.+.+..|+.||+|++|+||||+.+++ .++. ++||+++|+|||+|+||++|||++.|
T Consensus 156 a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~~----~a~~-~~kp~~~e~gG~~p~iV~~dADl~~A 230 (452)
T 3my7_A 156 AAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK----AAYS-SGKPAIGVGAGNVPVVIDETADIKRA 230 (452)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHHH----HHHT-SSSCEEECC--CEEEEECTTSCHHHH
T ss_pred HHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHHH----HHHh-cCCCEEecCCCCCeEEEeCCCCHHHH
Confidence 789999999999998888999999999999999999998654 4444 78999999999999999999999999
Q ss_pred HHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCE
Q 012802 332 AELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK 411 (456)
Q Consensus 332 a~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~ 411 (456)
++.+++++|+|+||.|+++++||||+++||+|+++|+++ .||++++++++++.++++++...|++
T Consensus 231 a~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~ 295 (452)
T 3my7_A 231 VASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNAK 295 (452)
T ss_dssp HHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECGG
T ss_pred HHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCCe
Confidence 999999999999999999999999999999999999875 39999999999999999887677888
Q ss_pred EEeCCccc---CCCCceEecEE-------EeeCCCCCcccccccccceeEEEEeC
Q 012802 412 LETGGERL---GAKGYYIKPTV-------FTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 412 v~~gg~~~---~~~g~~~~PTv-------l~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+ +||... ...|+|++||+ +.++++++++++ |+||||++|++|+
T Consensus 296 v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~ 348 (452)
T 3my7_A 296 I-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRAD 348 (452)
T ss_dssp G-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEES
T ss_pred E-ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeC
Confidence 7 476532 13589999997 668899999886 8999999999996
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-65 Score=527.09 Aligned_cols=336 Identities=17% Similarity=0.224 Sum_probs=293.4
Q ss_pred EEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhccchHHHHHHHH
Q 012802 96 HVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFR 175 (456)
Q Consensus 96 ~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~ 175 (456)
.++.++.+|++++++.|++||+ .|+.++.++|.++|+++++.|+++.++|+++++.|+||+..++...+...+.+.+.
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~ 82 (464)
T 3k9d_A 5 DKDLRSIQEVRNLIESANKAQK--ELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVY 82 (464)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHH
Confidence 3456778999999999999999 89999999999999999999999999999999999999988765444444444443
Q ss_pred HHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHH----
Q 012802 176 YYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSK---- 251 (456)
Q Consensus 176 ~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~---- 251 (456)
++....+ ..+. .+.+.+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++
T Consensus 83 ~~~~~~~-~~g~-~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~ 160 (464)
T 3k9d_A 83 NYIKDMK-TIGM-LKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISE 160 (464)
T ss_dssp HHHTTCC-CSEE-EEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred Hhhhccc-ccce-eccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHH
Confidence 3322111 1111 112345678899999999999999999999999999999999999999999999999998655
Q ss_pred HHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecC-CCCceEeccCCCHHH
Q 012802 252 LLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG-GKSPFIVCEDADVDK 330 (456)
Q Consensus 252 ~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelg-G~~~~iV~~daD~d~ 330 (456)
++.++|+|+|++|+|++++.+.+..|++||+||+|+||||+.+ ++.+++ ++||+ +|+| ||+|+||++|||++.
T Consensus 161 ~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~-~~kpv-lelG~G~~p~iV~~dADl~~ 234 (464)
T 3k9d_A 161 AAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAYS-SGTPA-IGVGPGNGPAFIERSANIPR 234 (464)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHTT-SSSCE-EEBCCCCCEEEECTTSCHHH
T ss_pred HHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHHh-cCCcE-EeeCCCCCeEEECCCCCHHH
Confidence 4688999999999999988889999999999999999999985 445555 78999 7888 999999999999999
Q ss_pred HHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHh-------hhcccCCCC-CCCCccccCCCHHHHHHHHHHH
Q 012802 331 AAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALA-------MKRVVGDPF-KGGIQQGPQIDSEQFEKILKYI 402 (456)
Q Consensus 331 aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~-------~~~~~G~p~-~~~~~~Gp~i~~~~~~~~~~~i 402 (456)
|++.+++++|+|+||.|++++|||||+++||+|+++|+++. +..++|+|. ++++++||+++.++++++.+++
T Consensus 235 Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~ 314 (464)
T 3k9d_A 235 AVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLA 314 (464)
T ss_dssp HHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999986 467889987 7889999999999999999999
Q ss_pred HHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 403 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 403 ~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+.++.+|+++++||.. ++++++++. +|+||||++|++|+
T Consensus 315 ~~a~~~ga~vl~gg~~--------------~v~~~~~~~-~E~fgPVl~v~~~~ 353 (464)
T 3k9d_A 315 GLTVPADARVLIAEET--------------KVGAKIPYS-REKLAPILAFYTAE 353 (464)
T ss_dssp TCCCCTTCCEEEEECC--------------CCSTTCGGG-SCCCSSEEEEEEES
T ss_pred hhhhcCCCEEEEcCCC--------------CCCCCCccc-ccccCceEEEEEeC
Confidence 9999999999999852 577888866 79999999999986
|
| >2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-64 Score=521.55 Aligned_cols=320 Identities=19% Similarity=0.140 Sum_probs=256.7
Q ss_pred eeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhc-------C
Q 012802 84 PTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDN-------G 156 (456)
Q Consensus 84 ~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~-------G 156 (456)
-++||.||+++++++.++.+|+++++++|++||. .|+.++..+|.++|+++++.|++++++|++++++|+ |
T Consensus 10 ~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~G 87 (463)
T 2h5g_A 10 GVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGR--MLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLA 87 (463)
T ss_dssp -------------------CCHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSC
T ss_pred CCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCC
Confidence 4789999999999999999999999999999999 899999999999999999999999999999999999 7
Q ss_pred CChh----hhhccchHHHHHHHHHHHHHhHhhcCcccCCC---CCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhh
Q 012802 157 KPFE----QSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD---GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALA 229 (456)
Q Consensus 157 k~~~----~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~---~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALa 229 (456)
||+. ++. .|+..+++.++|+++++++..+...+.. .+...++.++|+|||++|+||| |.... +++++||+
T Consensus 88 k~~~~rl~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALa 164 (463)
T 2h5g_A 88 APLLKRLSLST-SKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIA 164 (463)
T ss_dssp HHHHHTTCCCH-HHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHH
T ss_pred CchhhhhhhhH-HHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHH
Confidence 9987 344 5999999999999988877766543311 3456789999999999999777 77666 89999999
Q ss_pred cCCEEEeecCCCChhHHHHHHHHHHHc----CCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhC
Q 012802 230 CGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305 (456)
Q Consensus 230 aGN~VVlkps~~~p~~~~~l~~~l~~a----GlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~ 305 (456)
+||+||+|||+.+|+++..+++++.++ | |+|++|+|+| +.+++..|..|++||+|+||||+.+|+.|++.++
T Consensus 165 aGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa-- 240 (463)
T 2h5g_A 165 SGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNT-REEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK-- 240 (463)
T ss_dssp HTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCT-TCCC-------CCCSEEEEESCHHHHHHHHHHCS--
T ss_pred cCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcC-CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--
Confidence 999999999999999999999999999 9 9999999999 6678899999999999999999999999999876
Q ss_pred CCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCc
Q 012802 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 385 (456)
Q Consensus 306 ~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~ 385 (456)
+||+++|||||||+||++|||+|.|++.+++++|.| ||.|++++|||||+++||
T Consensus 241 -l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d------------------------ 294 (463)
T 2h5g_A 241 -GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR------------------------ 294 (463)
T ss_dssp -SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT------------------------
T ss_pred -CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc------------------------
Confidence 799999999999999999999999999999999999 999999999999999998
Q ss_pred cccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 386 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 386 ~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
||+ + .+++++++++|++++.|+.. ...|+|+ +++|++++||+||||++|++|+
T Consensus 295 -~p~-----~---~~~i~~~~~~Ga~v~~G~~~-~~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~ 347 (463)
T 2h5g_A 295 -TPL-----F---DQIIDMLRVEQVKIHAGPKF-ASYLTFS--------PSEVKSLRTEYGDLELCIEVVD 347 (463)
T ss_dssp -SHH-----H---HHHHHHHHHTTCEEEECHHH-HC-----------------CCSSCCCCSSEEEEEEES
T ss_pred -hHH-----H---HHHHHHHHhCCCEEEeCCcc-cccCccC--------CCCchHHhccccCceEEEEEeC
Confidence 343 2 34588888999999855542 2235553 5789999999999999999996
|
| >1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-63 Score=512.31 Aligned_cols=312 Identities=17% Similarity=0.159 Sum_probs=263.8
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCCh----hhhhccchHH-HHHHHHHHH
Q 012802 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPF----EQSAQTEVPM-TTRLFRYYA 178 (456)
Q Consensus 104 ~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~~~ev~~-~~~~l~~~a 178 (456)
.+++++++|++||+ .|+.++.++|.++|+++++.|++++++|++++++|+|||. .++...|+.. +++.++|++
T Consensus 15 ~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a 92 (468)
T 1vlu_A 15 SSQQIAKNARKAGN--ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVML 92 (468)
T ss_dssp HHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHH
T ss_pred hHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHH
Confidence 58899999999999 8999999999999999999999999999999999999998 7765568888 889999999
Q ss_pred HHhHhhc------CcccCC---CCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHH
Q 012802 179 GWADKIQ------GLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 249 (456)
Q Consensus 179 ~~~~~~~------~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l 249 (456)
++.++.. +...+. +.+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..+
T Consensus 93 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 170 (468)
T 1vlu_A 93 QGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREM 170 (468)
T ss_dssp HHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHH
Confidence 8887765 333221 12456789999999999999999 9 99999999999999999999999999999999
Q ss_pred HHHHH----H----cCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceE
Q 012802 250 SKLLH----E----AGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321 (456)
Q Consensus 250 ~~~l~----~----aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~i 321 (456)
++++. + +|+|+|++|+|+ ++.+++..|..||+||+|+||||+.+|+.|++.+ +||+++|+|||||+|
T Consensus 171 ~~l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a----~kpv~lElGGk~p~i 245 (468)
T 1vlu_A 171 AKIVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSIY 245 (468)
T ss_dssp HHHHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTTBCSCCEEEE
T ss_pred HHHHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc----CCCEEeecCCccceE
Confidence 99995 8 999999999999 6667889999999999999999999999999875 599999999999999
Q ss_pred eccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhccc---CCCCCCCCccccCCCHHHHHHH
Q 012802 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV---GDPFKGGIQQGPQIDSEQFEKI 398 (456)
Q Consensus 322 V~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~---G~p~~~~~~~Gp~i~~~~~~~~ 398 (456)
|++|||++.|++.+++++|.|+| .|++++|||||+++ |+|+++|.++++++++ |||.+
T Consensus 246 V~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~----------------- 306 (468)
T 1vlu_A 246 LDEDADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL----------------- 306 (468)
T ss_dssp ECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-----------------
T ss_pred ECCCCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-----------------
Confidence 99999999999999999999999 99999999999999 9999999999999987 87643
Q ss_pred HHH-HHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 399 LKY-IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 399 ~~~-i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
.++ |++++ ++++||. | ++|||+ ++++|.+++||+||||++|++|+
T Consensus 307 ~~~~i~~a~----~~~~gG~-----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~ 352 (468)
T 1vlu_A 307 KTAYFDKLN----ELGKLTE-----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVT 352 (468)
T ss_dssp HHHHHHHHH----HHTCCCH-----H--HHTTBC---------------CCCCEEEECC
T ss_pred hcccccccc----eeeccCC-----C--CCCcee--eCCCchhhhcCccCceEEEEEeC
Confidence 345 66665 3667775 4 799997 78999999999999999999986
|
| >4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-59 Score=485.70 Aligned_cols=305 Identities=20% Similarity=0.205 Sum_probs=255.7
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChh----hhhc-------cchHHH
Q 012802 102 AEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE----QSAQ-------TEVPMT 170 (456)
Q Consensus 102 ~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a~~-------~ev~~~ 170 (456)
.+|++++++.|++||. .|+.++..+|.++|+++++.|+++.++|++++++|+||+.. ++.. .|+..+
T Consensus 25 ~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~ 102 (444)
T 4ghk_A 25 DQYMTDVGRRARRASR--SIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTM 102 (444)
T ss_dssp HHHHHHHHHHHHHHHH--HHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHH
T ss_pred HHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHH
Confidence 5789999999999999 89999999999999999999999999999999999999853 4432 378899
Q ss_pred HHHHHHHHHHhHhhcCcccCC---CCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHH
Q 012802 171 TRLFRYYAGWADKIQGLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247 (456)
Q Consensus 171 ~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~ 247 (456)
++.++|++.+.+.. +...+. ..+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++.
T Consensus 103 ~~~l~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 179 (444)
T 4ghk_A 103 VEGLRQVATLPDPI-GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNT 179 (444)
T ss_dssp HHHHHHHHHSCCCT-TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred HHHHHHHHhhcccc-CccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHH
Confidence 99999999887542 333221 23567889999999999999998 8 688999999999999999999999999999
Q ss_pred HHHHHH----HHcCCCCCeEEEecCCch-HHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEe
Q 012802 248 YVSKLL----HEAGLPPGVLNIVSGYGP-TAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 322 (456)
Q Consensus 248 ~l~~~l----~~aGlP~gvv~vv~g~~~-~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV 322 (456)
.+++++ .++|+|+|++|+|+|.+. ..+..|.+||+||+|+||||+.+|+.|++.+ +||+++|||||||+||
T Consensus 180 ~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a----~~pv~lELGGk~p~IV 255 (444)
T 4ghk_A 180 ALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA----RVPMIKHLDGICHVYV 255 (444)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----CSCBCCCCCCCCEEEE
T ss_pred HHHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC----CCCEEEEcCCcCeEEE
Confidence 999997 799999999999998654 5788899999999999999999999998765 6999999999999999
Q ss_pred ccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhccc---CCCCCCCCccccCCCHHHHHHHH
Q 012802 323 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV---GDPFKGGIQQGPQIDSEQFEKIL 399 (456)
Q Consensus 323 ~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~---G~p~~~~~~~Gp~i~~~~~~~~~ 399 (456)
++|||+|.|++.+++++|.|+| .|++++|||||+++||+|+++|+++++++++ |+|. ..
T Consensus 256 ~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~-----------------~~ 317 (444)
T 4ghk_A 256 DDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD-----------------AR 317 (444)
T ss_dssp CTTCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH-----------------HH
T ss_pred CCCCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH-----------------HH
Confidence 9999999999999999999999 9999999999999999999999999999988 7653 14
Q ss_pred HHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 400 KYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 400 ~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++|+++. + | ++ ++++|++++||+||||++|++|+
T Consensus 318 ~~i~~a~-~--------------G------~~--~~~~~~~~~eEiFGPVl~v~~~~ 351 (444)
T 4ghk_A 318 AVLEAAG-V--------------G------PL--VDATDEDWRTEYLAPVLAIKIVD 351 (444)
T ss_dssp HHHHHTT-C--------------C------CC--EECCSGGGTCC---CEEEEEEES
T ss_pred HHHHhcc-c--------------C------cc--cCCCchhhhccccCceEEEEEeC
Confidence 5666642 1 2 22 35689999999999999999996
|
| >1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-59 Score=482.60 Aligned_cols=303 Identities=20% Similarity=0.201 Sum_probs=265.7
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCCh----hhhh-------ccchHHH
Q 012802 102 AEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPF----EQSA-------QTEVPMT 170 (456)
Q Consensus 102 ~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~-------~~ev~~~ 170 (456)
.+++++++++|++||+ .|+.++..+|.++|+++++.|++++++|+++++.|+||+. .++. ..|+..+
T Consensus 13 ~~~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~ 90 (427)
T 1o20_A 13 MDELLEKAKKVREAWD--VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEM 90 (427)
T ss_dssp -CHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHH
Confidence 4589999999999999 8999999999999999999999999999999999999985 4443 1489999
Q ss_pred HHHHHHHHHHhHhhcCcccCC---CCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHH
Q 012802 171 TRLFRYYAGWADKIQGLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247 (456)
Q Consensus 171 ~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~ 247 (456)
++.++||+++.++ .+...+. +.+...+++++|+|||++|+||| +..+++++++||++||+||+|||+.+|+++.
T Consensus 91 ~~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~ 167 (427)
T 1o20_A 91 IKACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNK 167 (427)
T ss_dssp HHHHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHH
T ss_pred HHHHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHH
Confidence 9999999988765 3433221 23456788999999999999886 4788999999999999999999999999999
Q ss_pred HHHHHHH----HcCCCCCeEEEecCC-chHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEe
Q 012802 248 YVSKLLH----EAGLPPGVLNIVSGY-GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 322 (456)
Q Consensus 248 ~l~~~l~----~aGlP~gvv~vv~g~-~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV 322 (456)
.+++++. ++|+|+|++|+|+|. +++.+..|..||+||+|+||||+.+|+.|++.+ +||+++|||||||+||
T Consensus 168 ~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a----~~~v~lELGGk~p~iV 243 (427)
T 1o20_A 168 AIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA----TVPVLETGVGNCHIFV 243 (427)
T ss_dssp HHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----SSCBCCCCCCCEEEEE
T ss_pred HHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc----CCCEEEecCCCceEEE
Confidence 9999998 689999999999984 466789999999999999999999999999876 4899999999999999
Q ss_pred ccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHH
Q 012802 323 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 402 (456)
Q Consensus 323 ~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i 402 (456)
++|||+|.|++.+++++|.|+| .|++++|||||+++||+|+++|.+++++++++
T Consensus 244 ~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~------------------------- 297 (427)
T 1o20_A 244 DESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE------------------------- 297 (427)
T ss_dssp CTTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE-------------------------
T ss_pred eCCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe-------------------------
Confidence 9999999999999999999999 99999999999999999999999999987652
Q ss_pred HHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 403 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 403 ~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+.||.+. .+ |+ ||| ++++|.+++||+||||++|++|+
T Consensus 298 ----------~~gg~~~--~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~ 334 (427)
T 1o20_A 298 ----------VRGCEKT--RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVK 334 (427)
T ss_dssp ----------EEECHHH--HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEES
T ss_pred ----------eecChhh--hh-hC-Ccc---cCCCcchhhcccccceEEEEEEC
Confidence 2233321 12 33 996 34678999999999999999996
|
| >4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=87.61 E-value=24 Score=35.05 Aligned_cols=167 Identities=14% Similarity=0.105 Sum_probs=93.9
Q ss_pred CCceEEEEEccceEEEEEcCc---ChhHHHHHHHHhhhhhcCCE-EEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecC
Q 012802 193 GPYHVQTLHEPIGVAGQIIPW---NFPLLMFAWKVGPALACGNT-IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSG 268 (456)
Q Consensus 193 ~~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~l~~ALaaGN~-VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g 268 (456)
.+.....++.|+--|++-.|. .||-..++. .+||..+|+. +|+..++..-.....+.-..+.+|+.+ +..-
T Consensus 119 ~G~~~g~~~~Pi~~VGlYVPGG~A~ypSsvLM~-aiPAkVAGV~~Iv~~tPp~~G~i~p~iL~AA~l~Gv~e----Iy~v 193 (423)
T 4gic_A 119 DGTLLGQKITPLDRVGLYVPGGKAAYPSSVLMN-AVPAKVAGVPELIMAVPAPRGELNALVLAAAYISGVDR----VFRI 193 (423)
T ss_dssp TSCEEEEEEEECSEEEEECCCSTTCCHHHHHHH-HHHHHHHTCSEEEEECCCGGGCCCHHHHHHHHHHTCCE----EECC
T ss_pred CCCEEEEEEEEecceeEEeeCCCCchhhHHHHh-hccHHHhCCCeEEEecCCCCCCccHHHHHHHHhcCCcE----EEEc
Confidence 456677889999999999995 366555554 6889999996 444443322222233334445566643 3333
Q ss_pred CchHHHHHHHc----CCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEec-cCCCHHHHHHHHHHHHhccC
Q 012802 269 YGPTAGAALAS----HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVC-EDADVDKAAELAHYALFFNQ 343 (456)
Q Consensus 269 ~~~~~~~~L~~----~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~-~daD~d~aa~~i~~~~~~~~ 343 (456)
.|...-.+|.- -|+||+|+=.|+.=+..+ |..-. +..-+=+.-|-.--+||. +++|.+.++..++.-+=...
T Consensus 194 GGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~A--Kr~v~-g~VgIDm~AGPSEilViAD~~a~p~~vAaDLlsQAEHd~ 270 (423)
T 4gic_A 194 GGAQAVAALAYGTETVPRVDKIVGPGNIYVATA--KKLVF-GQVGIDMVAGPSEILVISDGRTDPDWIAMDLFSQAEHDE 270 (423)
T ss_dssp CHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHH--HHHHB-TTBEECCCCCCCEEEEEECSCSCHHHHHHHHHHHHTTCT
T ss_pred CChhhhhhhccCCCcccceeEEecCCcHHHHHH--HHHhc-CCcCcccccccceEEEEeCCCCCHHHHHHHHHHhhccCC
Confidence 35554455543 678999999998766443 22221 222222222333334443 35899998877765443322
Q ss_pred CCcccCCceeEeccc--hHHHHHHHHHHHhh
Q 012802 344 GQCCCAGSRTFVHES--VYDQFVEKANALAM 372 (456)
Q Consensus 344 GQ~C~a~~~v~V~~~--i~d~f~~~l~~~~~ 372 (456)
..+.++|..+ ..++..+++.+.+.
T Consensus 271 -----~a~~iLvT~s~~la~~V~~~i~~~l~ 296 (423)
T 4gic_A 271 -----DAQAILISPDAAHLEAVQASIERLLP 296 (423)
T ss_dssp -----TCEEEEEESCHHHHHHHHHHHHHHGG
T ss_pred -----CCeEEEEeCcHHHHHHHHHHHHHHHh
Confidence 2345666554 33444444444443
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 456 | ||||
| d1bxsa_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-151 | |
| d1o04a_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-151 | |
| d1a4sa_ | 503 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-124 | |
| d1wnda_ | 474 | c.82.1.1 (A:) Putative betaine aldehyde dehydrogen | 1e-105 | |
| d1euha_ | 474 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 7e-85 | |
| d1uzba_ | 516 | c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen | 2e-84 | |
| d1ad3a_ | 446 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 3e-67 | |
| d1ky8a_ | 499 | c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3 | 6e-67 | |
| d1ez0a_ | 504 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 2e-36 | |
| d1o20a_ | 414 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 1e-34 | |
| d1vlua_ | 436 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 3e-15 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Score = 438 bits (1128), Expect = e-151
Identities = 226/402 (56%), Positives = 288/402 (71%), Gaps = 2/402 (0%)
Query: 56 PITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKA 115
P+T + YT++ IN ++ S SGK FP +P T + + V EG+ EDV++AV AAR+A
Sbjct: 5 PLTNL-QFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQA 63
Query: 116 FDEGP-WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLF 174
F G W M A ER +++ + ADL+ER +A +E + GK F + ++ +
Sbjct: 64 FQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTL 123
Query: 175 RYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTI 234
RY AGWADKIQG T P DG + T EP+GV GQIIPWNFPLLMF WK+GPAL+CGNT+
Sbjct: 124 RYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTV 183
Query: 235 VLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTT 294
V+K AEQTPL+AL++ L+ EAG PPGV+NIV GYGPTAGAA++SHM+VDK+AFTGST
Sbjct: 184 VVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEV 243
Query: 295 GKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTF 354
GK++ + A KSNLK V+LELGGKSP IV DAD+D A E AH +F++QGQCC A SR F
Sbjct: 244 GKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLF 303
Query: 355 VHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLET 414
V ES+YD+FV ++ A K V+G+P G+ QGPQID EQ+EKIL I SG GAKLE
Sbjct: 304 VEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLEC 363
Query: 415 GGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
GG G KGY+I+PTVF+ V DDM IAK+EIFGPVQ I+K+K
Sbjct: 364 GGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFK 405
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Score = 436 bits (1122), Expect = e-151
Identities = 240/406 (59%), Positives = 294/406 (72%), Gaps = 2/406 (0%)
Query: 52 AAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSA 111
A P P +V Q+ IN ++ D+ S KTFPT++P TG+VI VAEG+ EDV++AV A
Sbjct: 1 AVPAPNQQP-EVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKA 59
Query: 112 ARKAFDEGP-WPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMT 170
AR AF G W RM A R +++ R ADL+ER +AALET DNGKP+ S ++ M
Sbjct: 60 ARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMV 119
Query: 171 TRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALAC 230
+ RYYAGWADK G T P DG + T HEP+GV GQIIPWNFPLLM AWK+GPALA
Sbjct: 120 LKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALAT 179
Query: 231 GNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTG 290
GN +V+K AEQTPL+ALYV+ L+ EAG PPGV+NIV G+GPTAGAA+ASH +VDK+AFTG
Sbjct: 180 GNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTG 239
Query: 291 STTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAG 350
ST G+++ A SNLK VTLELGGKSP I+ DAD+D A E AH+ALFFNQGQC CAG
Sbjct: 240 STEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAG 299
Query: 351 SRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGA 410
SRTFV E +YD+FVE++ A A RVVG+PF +QGPQ+D QF+KIL YI +G GA
Sbjct: 300 SRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGA 359
Query: 411 KLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
KL GG +GY+I+PTVF V+D M IAK+EIFGPV ILK+K
Sbjct: 360 KLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFK 405
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Score = 368 bits (946), Expect = e-124
Identities = 147/406 (36%), Positives = 220/406 (54%), Gaps = 12/406 (2%)
Query: 58 TPPVKVDYTQLLINGQFVDSASGKTF-PTLDPRTGDVITHVAEGEAEDVNRAVSAARKAF 116
T V V G+ + S G T P +P TG V+ + AE+V++AV +A+ A+
Sbjct: 12 TGSVVVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAY 71
Query: 117 DEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRY 176
+ W +M ERS+++L A ++ D IA LE +N A+ ++ + Y
Sbjct: 72 LK--WSKMAGIERSRVMLEAARIIRERRDNIAKLEVINN-GKTITEAEYDIDAAWQCIEY 128
Query: 177 YAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVL 236
YAG A + G G T EP+GV I+ WN+P ++ AWK PALACGN +V
Sbjct: 129 YAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVF 188
Query: 237 KTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGK 296
K + TP++ + ++++ HEAG+P G++N+V G G G+ L H V K++FTGS TGK
Sbjct: 189 KPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGK 247
Query: 297 IVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVH 356
V++++AK +K VTLELGGKSP ++ +D +++ A A A F QGQ C G+R FV
Sbjct: 248 KVMEMSAK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQ 306
Query: 357 ESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGG 416
+ QF+E+ VVGDP + G I Q +K+L ++ GA++ GG
Sbjct: 307 REIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGG 366
Query: 417 ERLG------AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
E L GY++ P V +DDM K+EIFGPV S+L +
Sbjct: 367 EPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFD 412
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Score = 319 bits (817), Expect = e-105
Identities = 147/393 (37%), Positives = 213/393 (54%), Gaps = 7/393 (1%)
Query: 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMT 125
+LLING+ V G+ P +P TGDV+ +AE AE V+ AV AA AF E W + T
Sbjct: 3 HKLLINGELVS-GEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAE--WGQTT 59
Query: 126 AYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQ 185
R++ +L+ AD++E + A LE+ + GKP + E+P +FR++AG A +
Sbjct: 60 PKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLN 119
Query: 186 GLTAPADGPYH-VQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 244
GL A H +P+GV I PWN+PL+M AWK+ PALA GN +VLK +E TPL
Sbjct: 120 GLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPL 179
Query: 245 SALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304
+AL +++L + P GV+NI+ G G T G L H +V ++ TGS TG+ ++
Sbjct: 180 TALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIIS-HTA 237
Query: 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364
S++K +ELGGK+P IV +DAD++ E ++N GQ C A R + + +YD V
Sbjct: 238 SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLV 297
Query: 365 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGV-DGGAKLETGGERLGAKG 423
EK A G P + GP E++ K + G K+ TGGE+ G
Sbjct: 298 EKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNG 357
Query: 424 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
YY PT+ G D I + E+FGPV S+ +
Sbjct: 358 YYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFD 390
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Score = 266 bits (680), Expect = 7e-85
Identities = 113/395 (28%), Positives = 181/395 (45%), Gaps = 16/395 (4%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
+ +NG++ S +P +G + V E+V+ ++A+KA W ++
Sbjct: 5 KNYVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPA--WRALSY 60
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRL-----FRYYAGWA 181
ER+ + + AD+L R ++I A+ + + K ++ + V +
Sbjct: 61 IERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGE 120
Query: 182 DKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
G A EP+G+ I P+N+P+ + K+ PAL GN I K Q
Sbjct: 121 VLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQ 180
Query: 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
+S L +++ EAGLP GV N ++G G G + H V+ + FTGST G+ + ++
Sbjct: 181 GSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKM 240
Query: 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
A ++P+ LELGGK IV EDAD++ A+ F GQ C A R V ESV D
Sbjct: 241 AG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVAD 297
Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 421
+ VEK + + + P ID++ + + I D GA T +R
Sbjct: 298 ELVEK-IREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKR--- 353
Query: 422 KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
+G I P +F V DM +A +E FGPV I++
Sbjct: 354 EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVT 388
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 266 bits (680), Expect = 2e-84
Identities = 132/416 (31%), Positives = 204/416 (49%), Gaps = 16/416 (3%)
Query: 49 AAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPR-TGDVITHVAEGEAEDVNR 107
A A + Y L I G++VD+ + +L+P +V+ A+ +
Sbjct: 22 AMREALRRVREEFGRHY-PLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEA 78
Query: 108 AVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEV 167
A+ AA KAF W +RS+++L+ A L+ R E+ A ++ GK + ++ +V
Sbjct: 79 ALEAAWKAFKT--WKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEA-SADV 135
Query: 168 PMTTRLFRYYAGWADKIQGLTAPADGPY--HVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225
YYA A + + ++ + P+G I PWNFP+ +F +
Sbjct: 136 AEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIV 195
Query: 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDK 285
+A GNT++ K AE + V ++ HEAG PPGV+N + G G GA L H +
Sbjct: 196 GPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRF 255
Query: 286 LAFTGSTTTGKIVLQLAAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 340
+ FTGS G + + A + + K +E GGK+ IV E AD D AAE + +
Sbjct: 256 INFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAY 315
Query: 341 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 400
QGQ C A SR + + Y+ +E+ A + VG P + GP + +EQ K+L
Sbjct: 316 GFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLS 374
Query: 401 YIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
YI G + G + GG+RL +GY+I PTVFT V IA++EIFGPV S+++ K
Sbjct: 375 YIEIGKNEGQLV-LGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVK 429
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 219 bits (559), Expect = 3e-67
Identities = 92/355 (25%), Positives = 139/355 (39%), Gaps = 17/355 (4%)
Query: 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164
++ V AR+AF+ + R + + ++ + I+ D GK S
Sbjct: 2 ISDTVKRAREAFNS--GKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYY 59
Query: 165 TEVPMTTRLFRYYA----GWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220
EV WA+ + EP+GV I WN+P +
Sbjct: 60 EEVAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLT 119
Query: 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH 280
+ A+A GN ++LK +E + A ++ L+ + + G
Sbjct: 120 IQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQ---YMDQNLYLVVKGGVPETTELLK 176
Query: 281 MEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 340
D + +TGST GKIV+ AAK +L PVTLELGGKSP V +D D+D A + F
Sbjct: 177 ERFDHIMYTGSTAVGKIVMAAAAK-HLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF 235
Query: 341 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILK 400
N GQ C A S+ +Q VEK G+ K G I+ F+++
Sbjct: 236 MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLK-DFYGEDAKQSRDYGRIINDRHFQRVKG 294
Query: 401 YIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 455
I + G YI PT+ V + ++EIFGPV I+
Sbjct: 295 LIDNQK------VAHGGTWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCV 343
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Score = 220 bits (561), Expect = 6e-67
Identities = 112/396 (28%), Positives = 168/396 (42%), Gaps = 14/396 (3%)
Query: 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTA 126
+ G++ S G+ P I V E+V R + K M
Sbjct: 18 PSYLAGEWGGS--GQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWS-ARDMPG 74
Query: 127 YERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG 186
ER ++ + AD++ER+ D A + + GKP A EV R KI G
Sbjct: 75 TERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSA-AVGEVKAAVDRLRLAELDLKKIGG 133
Query: 187 LTAPADGPYHVQ-----TLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241
P D Y EP+GV I P+N+PL K+ + GN +V+K +
Sbjct: 134 DYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSIS 193
Query: 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301
PL A K L +AG PP + +++ G A + + V ++FTGST G+ V+++
Sbjct: 194 DPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEK-IVADDRVAAVSFTGSTEVGERVVKV 252
Query: 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYD 361
+K +ELGG P IV EDAD+D AA+ ++ GQ C A VY
Sbjct: 253 GG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYG 309
Query: 362 QFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA 421
+ VE+ VGDP + GP I ++++ I V+ G ++ GG RLG
Sbjct: 310 KLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGP 369
Query: 422 KGYYIKP-TVFTGVKDDMLIAKDEIFGPVQSILKYK 456
DM++ K E+F PV S ++ K
Sbjct: 370 TYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVK 405
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Score = 138 bits (347), Expect = 2e-36
Identities = 68/397 (17%), Positives = 124/397 (31%), Gaps = 31/397 (7%)
Query: 79 SGKTFPTLDPRTGDVI-THVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFA 137
+ F + TG+ + +VN+A +AA K + + R+ +R+ ++ A
Sbjct: 1 TDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARD--FRRLNNSKRASLLRTIA 58
Query: 138 DLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD----- 192
LE +D+I A + P + E+ T R +A + A D
Sbjct: 59 SELEARSDDIIARAHLETALPEVR-LTGEIARTANQLRLFADVVNSGSYHQAILDTPNPT 117
Query: 193 ----GPYHVQTLHEPIGVAGQIIPWNFPL--LMFAWKVGPALACGNTIVLKTAEQTPLS- 245
++ +G NFPL ALA G +++K P +
Sbjct: 118 RAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTS 177
Query: 246 ---ALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302
A + + L + LP + ++ G G AL SH E+ + FTGS G+ + LA
Sbjct: 178 QIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLA 237
Query: 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAEL---AHYALFFNQGQCCCAGSRTFVHESV 359
+ G + + A+L ++ GQ C F +
Sbjct: 238 HERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTP 297
Query: 360 YDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL 419
Q + +++ + I +
Sbjct: 298 ETQAFIETAQSLIRQQSPSTLLTPGIRDSYQSQVVSRGSDDGIDVTFS---------QAE 348
Query: 420 GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456
+ ++EIFGP I+ +
Sbjct: 349 SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCE 385
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Score = 131 bits (330), Expect = 1e-34
Identities = 48/308 (15%), Positives = 90/308 (29%), Gaps = 15/308 (4%)
Query: 103 EDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQS 162
+++ R+A+D T E++K I + A+ L+ EI D K E+
Sbjct: 1 DELLEKAKKVREAWDV--LRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERG 58
Query: 163 -----------AQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQII 211
+ + G D + + ++ + + I
Sbjct: 59 VKESLVDRLALNDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGI 118
Query: 212 PWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSG-YG 270
+ + AL GNTI+L+ S + + EA +
Sbjct: 119 IYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIE 178
Query: 271 PTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDK 330
T + + + + + G ++ + PV G V E AD+ K
Sbjct: 179 NTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKK 238
Query: 331 AAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQI 390
A + A C A + VHE + +F+ K V ++
Sbjct: 239 AVPVIINAKTQR-PGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCEKTREIVPD 297
Query: 391 DSEQFEKI 398
E
Sbjct: 298 VVPATEDD 305
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 74.9 bits (183), Expect = 3e-15
Identities = 42/294 (14%), Positives = 91/294 (30%), Gaps = 34/294 (11%)
Query: 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQ 164
+ ARKA + ++ RS I+ + D L+ + I N + +
Sbjct: 5 SQQIAKNARKAGNI--LKTISNEGRSDILYKIHDALKANAHAIEE----ANKIDLAVAKE 58
Query: 165 TEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQ--------------- 209
T + + L R DK + + G V L +P+G
Sbjct: 59 TGLA-DSLLKRLDLFKGDKFEVM---LQGIKDVAELEDPVGKVKMARELDDGLTLYQVTA 114
Query: 210 -----IIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLL---HEAGLPPG 261
++ + + A ++ GN +LK +++ + ++K++
Sbjct: 115 PVGVLLVIFESRPEVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSET 174
Query: 262 VLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321
+ + S ++ ++ D+ +++ + PV G
Sbjct: 175 GVPVGSVQLIETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTTKIPVLGHADGICSIY 234
Query: 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 375
+ EDAD+ KA ++ A C ++ + N V
Sbjct: 235 LDEDADLIKAKRISLDAKTNYPAGCNA-METLLINPKFSKWWEVLENLTLEGGV 287
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 456 | |||
| d1bxsa_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Sheep (O | 100.0 | |
| d1o04a_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Human (H | 100.0 | |
| d1a4sa_ | 503 | Aldehyde reductase (dehydrogenase), ALDH {Baltic c | 100.0 | |
| d1wnda_ | 474 | Putative betaine aldehyde dehydrogenase YdcW {Esch | 100.0 | |
| d1uzba_ | 516 | 1-pyrroline-5-carboxylate dehydrogenase {Thermus t | 100.0 | |
| d1ky8a_ | 499 | Non-phosphorylating glyceraldehyde-3-phosphate deh | 100.0 | |
| d1euha_ | 474 | Aldehyde reductase (dehydrogenase), ALDH {Streptoc | 100.0 | |
| d1ad3a_ | 446 | Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat | 100.0 | |
| d1ez0a_ | 504 | Aldehyde reductase (dehydrogenase), ALDH {Vibrio h | 100.0 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 100.0 | |
| d1vlua_ | 436 | Gamma-glutamyl phosphate reductase {Baker's yeast | 100.0 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Probab=100.00 E-value=5e-88 Score=706.16 Aligned_cols=398 Identities=57% Similarity=0.974 Sum_probs=381.9
Q ss_pred CCCCCCccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHH
Q 012802 59 PPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFA 137 (456)
Q Consensus 59 ~~~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~-~W~~~~~~~R~~~L~~~a 137 (456)
...+++++++||||+|+.+.++++++++||+||++|++++.++.+|+++|+++|++||+.+ .|++++.++|.++|++++
T Consensus 7 ~~~~~~~~~~yI~G~w~~~~s~~~~~v~nP~t~e~i~~v~~a~~~dvd~Av~aA~~Af~a~~~W~~~s~~eR~~iL~kia 86 (494)
T d1bxsa_ 7 TNLQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLA 86 (494)
T ss_dssp SSCCCCCCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHH
T ss_pred CCCCcCcCCEEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHH
Confidence 3466778899999999998889999999999999999999999999999999999999742 499999999999999999
Q ss_pred HHHHhcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhH
Q 012802 138 DLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPL 217 (456)
Q Consensus 138 ~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~ 217 (456)
+.|++++++|++++++|+|||..++...|+..+++.++|++.+.++..+...+...+...++.++|+|||++|+|||||+
T Consensus 87 ~~L~~~~eela~l~~~E~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~ 166 (494)
T d1bxsa_ 87 DLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPL 166 (494)
T ss_dssp HHHHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHH
T ss_pred HHHHhCHHHHHHHHHHhcCCchhhhhhhhhhhhhHHHHHHhhhhhhhcceeecCCCCceeEEEEccEEEEEEEeCccchh
Confidence 99999999999999999999998876678999999999999999988887777777888999999999999999999999
Q ss_pred HHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHH
Q 012802 218 LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 297 (456)
Q Consensus 218 ~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~ 297 (456)
...++++++||++||+||+|||+.+|+++..+++++.++|||+|++|+|+|++.++++.|++||+|++|.||||+.+|+.
T Consensus 167 ~~~~~~i~~ALaaGN~VVlKpse~tp~~a~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~p~v~~i~fTGS~~~g~~ 246 (494)
T d1bxsa_ 167 LMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKL 246 (494)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHcCCeEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEecCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988889999999999999999999999999
Q ss_pred HHHHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccC
Q 012802 298 VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 377 (456)
Q Consensus 298 i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G 377 (456)
|++.++..++||+++|+||+||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|
T Consensus 247 i~~~aa~~~~~~~~lElGG~np~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~~~d~f~~~l~~~~~~~~~g 326 (494)
T d1bxsa_ 247 IKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLG 326 (494)
T ss_dssp HHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBS
T ss_pred HHHHhcccCCCeEEEEcCCcCcEEECcCcchhHhHHHHHHHHhcCCCcccccceEEecccchhHHHHHHHHhhhhheeee
Confidence 99998876799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 378 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 378 ~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+|.++++++||+++..+++++.++|++++++|+++++||...+++|+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 327 ~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FGPvl~v~~~~ 405 (494)
T d1bxsa_ 327 NPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFK 405 (494)
T ss_dssp CTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEEC
T ss_pred ccCCCCCcCCCcCCHHHHHHHHHHHHHHHHcCCEEEeCCCccCCCceeEcCEEEeCCCCCcHHHhccccCceEEEEEEC
Confidence 9999999999999999999999999999999999999998877889999999999999999999999999999999996
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00 E-value=3.8e-87 Score=699.20 Aligned_cols=396 Identities=60% Similarity=0.998 Sum_probs=379.6
Q ss_pred CCCCccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHHHH
Q 012802 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADL 139 (456)
Q Consensus 61 ~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~-~W~~~~~~~R~~~L~~~a~~ 139 (456)
.++.++++||||+|+++.++++++++||+||+++++++.++.+|+++|+++|++||+.+ .|++++.++|.++|+++++.
T Consensus 9 p~~~~~~~~I~G~w~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~Af~~~~~W~~~~~~eRa~iL~~~a~~ 88 (494)
T d1o04a_ 9 PEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADL 88 (494)
T ss_dssp CCCCCCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHH
T ss_pred CccccCCeEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHH
Confidence 44667899999999998889999999999999999999999999999999999999632 49999999999999999999
Q ss_pred HHhcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHH
Q 012802 140 LERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLM 219 (456)
Q Consensus 140 l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 219 (456)
|++++++|++++++|+|||+.++...|+..+++.++|++++.++..+...+...+...+++++|+|||++|+|||||+..
T Consensus 89 l~~~~eela~~~~~E~GK~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~ 168 (494)
T d1o04a_ 89 IERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLM 168 (494)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HHHhHHHHHHHHHHHhCcchhhhhhhHHHHHHHHHHHHHHHHHHhcCceeccCCCceeEEEEecccEEEEECCcccHHHH
Confidence 99999999999999999999988777999999999999999988887777767778889999999999999999999999
Q ss_pred HHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHH
Q 012802 220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299 (456)
Q Consensus 220 ~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~ 299 (456)
.++++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+|++.+.++.|+.||+|+.|.||||+.+|+.|+
T Consensus 169 ~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~l~~~aglP~gv~~~v~g~~~~~g~~L~~~~~v~~v~fTGS~~~g~~i~ 248 (494)
T d1o04a_ 169 QAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQ 248 (494)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEeCCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHhhCCCcCEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCC
Q 012802 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379 (456)
Q Consensus 300 ~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p 379 (456)
+.++.+++||+++||||+||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|.+++.++++|+|
T Consensus 249 ~~aa~~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p 328 (494)
T d1o04a_ 249 VAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNP 328 (494)
T ss_dssp HHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCT
T ss_pred HHhhccCCCeEEEECCCcCcEEEccCccHHHHHHhhhhhccccCcccccccccccccchhhHHHHHHHHHHhhheeecCc
Confidence 98875589999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 380 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 380 ~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
.++++++||++++.+++++.++|++++++|+++++||....++|+|++||||.+++++|++++||+||||++|++|+
T Consensus 329 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FGPvl~v~~~~ 405 (494)
T d1o04a_ 329 FDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFK 405 (494)
T ss_dssp TSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEEC
T ss_pred ccccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCceEcCEEEeCCCCCCHHHhccccCceEEEEEeC
Confidence 99999999999999999999999999999999999998877789999999999999999999999999999999996
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Probab=100.00 E-value=6.4e-84 Score=675.46 Aligned_cols=393 Identities=37% Similarity=0.684 Sum_probs=373.2
Q ss_pred CCCCCCccCceecCEeeeCCCCCee-eeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Q 012802 59 PPVKVDYTQLLINGQFVDSASGKTF-PTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFA 137 (456)
Q Consensus 59 ~~~~~~~~~~~I~G~~~~~~~~~~~-~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a 137 (456)
.++.+....+||||+|+++.+|+++ +++||+||+++++++.++.+|+++|+++|++||+ .|++++..+|.++|++++
T Consensus 13 ~~~~~~~~~n~I~G~~v~~~~g~~~~~V~nP~tge~i~~v~~a~~~dV~~AV~aA~~A~~--~W~~~s~~eR~~iL~~~a 90 (503)
T d1a4sa_ 13 GSVVVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL--KWSKMAGIERSRVMLEAA 90 (503)
T ss_dssp TTCCCCSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHH
T ss_pred CceeecCCCeEECCEEeCCCCCCeeeeeecCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHH
Confidence 4445566678999999998777766 6899999999999999999999999999999999 899999999999999999
Q ss_pred HHHHhcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhH
Q 012802 138 DLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPL 217 (456)
Q Consensus 138 ~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~ 217 (456)
+.|++++++|++++++|+|||+.++.. |+..+++.++|++.+.++..+.....+.+...++.++|+|||++|+|||||+
T Consensus 91 ~~L~~~~eela~~~~~etGkp~~ea~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~NfP~ 169 (503)
T d1a4sa_ 91 RIIRERRDNIAKLEVINNGKTITEAEY-DIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPF 169 (503)
T ss_dssp HHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECCSSSHH
T ss_pred HHHHHhHHHHHHHHHHhhhhcchhhhh-hhhhhhhcccccccccccccccccccCCCcccccccccceeeecccCCCChH
Confidence 999999999999999999999999875 9999999999999998887776665556778899999999999999999999
Q ss_pred HHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHH
Q 012802 218 LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 297 (456)
Q Consensus 218 ~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~ 297 (456)
...++++++||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+| +.+.+..|++|++|++|.||||+.+|+.
T Consensus 170 ~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~e~g~~L~~~~~v~~V~fTGS~~~G~~ 248 (503)
T d1a4sa_ 170 MIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKK 248 (503)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCCCeEEEecC-CHHHHHHHHhCCCcCEEEEeCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 5688999999999999999999999999
Q ss_pred HHHHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccC
Q 012802 298 VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 377 (456)
Q Consensus 298 i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G 377 (456)
|++.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++++|++++.+.++++++|
T Consensus 249 i~~~aa~-~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~ri~v~~~~~~~~~~~l~~~~~~~~~g 327 (503)
T d1a4sa_ 249 VMEMSAK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVG 327 (503)
T ss_dssp HHHHHHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBS
T ss_pred HHHHhhh-cCCcEEEECCCcCcEEECCCccHHHHhhhhhcchhccCCCccccCcceEEEechhhhHHHHHHHhhhhEeec
Confidence 9999987 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCccc------CCCCceEecEEEeeCCCCCcccccccccceeE
Q 012802 378 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL------GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQS 451 (456)
Q Consensus 378 ~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~------~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~ 451 (456)
+|.++.+++||++++.+++++.+++++++++||++++||... ..+|+|++||||.+++++|++++||+||||++
T Consensus 328 ~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~Ga~v~~gg~~~~~~~~~~~~G~~~~Ptvl~~~~~~~~~~~~E~FgPvl~ 407 (503)
T d1a4sa_ 328 DPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMS 407 (503)
T ss_dssp CTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEE
T ss_pred cccccccccccccCHHHHHHHHHHHHHHHHcCCEEEECCcccCCCCcccCCceEEcCEEEeCCCCCCHHHhccccCceEE
Confidence 999999999999999999999999999999999999999753 25789999999999999999999999999999
Q ss_pred EEEeC
Q 012802 452 ILKYK 456 (456)
Q Consensus 452 v~~~~ 456 (456)
|++|+
T Consensus 408 v~~~~ 412 (503)
T d1a4sa_ 408 VLPFD 412 (503)
T ss_dssp EEEEC
T ss_pred EEEcC
Confidence 99996
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.9e-82 Score=659.49 Aligned_cols=387 Identities=37% Similarity=0.653 Sum_probs=361.2
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcH
Q 012802 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (456)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (456)
++++||||+|+.+ ++++++++||+||++|++++.++.+|+++|+++|++||+ .|++++.++|.++|+++++.|++++
T Consensus 2 ~~~l~I~G~~v~~-~g~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~ 78 (474)
T d1wnda_ 2 QHKLLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA--EWGQTTPKVRAECLLKLADVIEENG 78 (474)
T ss_dssp CCCEEETTEEECC-CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCccEECCeEeCC-CCCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhCH
Confidence 4689999999975 668999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccC-CCCCceEEEEEccceEEEEEcCcChhHHHHHHH
Q 012802 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (456)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (456)
++|+++++.|+|||+.++...++..+.+.++|++...........+ ...+...+++++|+|||++|+|||||+...+++
T Consensus 79 ~ela~~~~~e~Gk~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~ 158 (474)
T d1wnda_ 79 QVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWK 158 (474)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCChhHhhhcccccccccccccccccccccccccccccCCcceEEEEecccceEEEeecchHhhhhhcc
Confidence 9999999999999999987767777778888777765544333222 224677889999999999999999999999999
Q ss_pred HhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHh
Q 012802 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (456)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa 303 (456)
+++||++||+||+|||+.+|+++..+++++++ ++|+|++|+|++++.++++.|++||+|+.|.||||+++|+.|++.++
T Consensus 159 ~a~ALaaGN~Vv~Kps~~~p~~~~~~~~l~~~-~lP~gv~~~v~g~~~~~g~~L~~~p~i~~v~fTGS~~~G~~i~~~a~ 237 (474)
T d1wnda_ 159 LAPALAAGNCVVLKPSEITPLTALKLAELAKD-IFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTA 237 (474)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHTT-TSCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHG
T ss_pred HHHHHHhCCCEEEeCCCcCcHHHHHHHHHHHH-hCCCCcEEEEeCCcHHHHHHHHhCCCcCEEEeeCCHHHHHHHHHhhh
Confidence 99999999999999999999999999999977 59999999999988889999999999999999999999999999998
Q ss_pred hCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCC
Q 012802 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (456)
Q Consensus 304 ~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 383 (456)
+ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|+|.+++
T Consensus 238 ~-~~k~~~lElgG~~p~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~~~~~l~~~~~~l~~G~~~~~~ 316 (474)
T d1wnda_ 238 S-SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDES 316 (474)
T ss_dssp G-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTT
T ss_pred c-CCCeEEEEcCCCCceEEcCchhhhhhhhhhhhhcccCCCcccccccccccccccchhhhhhhHHHHHhhccCCcCCCC
Confidence 8 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHhhCCC-EEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 384 IQQGPQIDSEQFEKILKYIRSGVDGGA-KLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 384 ~~~Gp~i~~~~~~~~~~~i~~a~~~Ga-~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
+++||+++..+.+++.+++++++.+|+ .++.|+....++|+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 317 ~~~Gpli~~~~~~~~~~~i~~a~~~ga~~v~~G~~~~~~~g~~~~Ptil~~~~~~~~~~~eE~FGPVl~v~~~~ 390 (474)
T d1wnda_ 317 TELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFD 390 (474)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEEC
T ss_pred ceecccccccccchHHHHHHHHHHCCCeEEEeCCcccCCCceEEeeeEeecccccccceeecccCCeEEEEEeC
Confidence 999999999999999999999999998 4666666666789999999999999999999999999999999996
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1.9e-80 Score=651.63 Aligned_cols=385 Identities=34% Similarity=0.550 Sum_probs=359.8
Q ss_pred ccCceecCEeeeCCCCCeeeeecCC-CCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 012802 65 YTQLLINGQFVDSASGKTFPTLDPR-TGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (456)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~-tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (456)
++++||||+|+.+ ++++.++||. ||+++++++.++.+|+++|+++|++||+ .|+++|.++|.++|+++++.|+++
T Consensus 37 ~~~l~I~G~~v~s--~~~~~~~nP~~tge~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~s~~~R~~iL~~~a~~l~~~ 112 (516)
T d1uzba_ 37 HYPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWKDWPQEDRSRLLLKAAALMRRR 112 (516)
T ss_dssp EECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred CCCeEEcCEEECC--CCCeEEeCCCCCCeEEEEEcCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHH
Confidence 5799999999974 4678999996 7999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccC--CCCCceEEEEEccceEEEEEcCcChhHHHHH
Q 012802 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP--ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221 (456)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 221 (456)
+++|++++++|+|||+.++.. |+..+++.++|++.......+.... ...+...+.+++|+|||++|+|||||+..++
T Consensus 113 ~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~PwN~Pl~~~~ 191 (516)
T d1uzba_ 113 KRELEATLVYEVGKNWVEASA-DVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFT 191 (516)
T ss_dssp HHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHH
T ss_pred HHHHHHHHHHHhCCCccccch-hHHHHHHHHHHHHHHHHhhhhcccccccccccceeEEeeccCcccccccccccccccc
Confidence 999999999999999999864 9999999999999988877654332 2235677888999999999999999999999
Q ss_pred HHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHH
Q 012802 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (456)
Q Consensus 222 ~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~ 301 (456)
+++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+.+..|+.||+|+.|.||||+.+|+.|++.
T Consensus 192 ~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~hp~v~~I~FTGs~~~G~~i~~~ 271 (516)
T d1uzba_ 192 GMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEA 271 (516)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred ccccchhhhcccccccccchhHHHHHHHHHHHHHhCcCcCeEEEccCChHHHHHHHHhCCCcCEEecccchhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999998
Q ss_pred Hhh-----CCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhccc
Q 012802 302 AAK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 376 (456)
Q Consensus 302 aa~-----~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~ 376 (456)
++. .++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|++++.++++++++
T Consensus 272 aa~~~~~~~~~k~v~lElgG~~p~iV~~dAd~~~aa~~i~~~~~~~~GQ~C~a~~ri~v~~~i~d~~~~~~~~~~~~l~~ 351 (516)
T d1uzba_ 272 AGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSV 351 (516)
T ss_dssp HTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCB
T ss_pred HhhcccchhhhhhheeeccCccceeeecchhHHHHHHHHhhhhcccCCCcccccCccccccccccchhhHHHHHHHhccc
Confidence 872 368999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 377 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 377 G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
| |.++.+++||+++..+++++.++|++++++|+.+ +||...+.+|+|++||||.+++++|++++||+||||++|++|+
T Consensus 352 g-~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v-~~g~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~ 429 (516)
T d1uzba_ 352 G-PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLV-LGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVK 429 (516)
T ss_dssp S-CGGGCCSBCCCSCHHHHHHHHHHHHHHTTTSEEE-ECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred C-CCcccCccccccCHHHHHHHHHHHHHHHHCCCEE-ECCCcCCCCCceECCEEEecCCCCchhhcCCCcCceEEEEEeC
Confidence 9 5688899999999999999999999999999766 4665556679999999999999999999999999999999996
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Probab=100.00 E-value=4.1e-74 Score=601.53 Aligned_cols=385 Identities=29% Similarity=0.432 Sum_probs=352.3
Q ss_pred CCCccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 012802 62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE 141 (456)
Q Consensus 62 ~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~ 141 (456)
.+..+++||||+|+. ++++++++||.||+++++++.++.+|+++|++.|++|+.. .|+++|.++|.++|+++++.|+
T Consensus 13 ~~~~~~~~I~G~~~~--sg~~~~v~~P~t~~~i~~v~~a~~~dv~~Av~~A~~a~~~-~w~~~~~~~R~~iL~~~a~~l~ 89 (499)
T d1ky8a_ 13 GVPVYPSYLAGEWGG--SGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRW-SARDMPGTERLAVLRKAADIIE 89 (499)
T ss_dssp TEEEECEECSSSEEC--CSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHH-HHHHSCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCEECCeECC--CCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHhchh-hhhcCCHHHHHHHHHHHHHHHH
Confidence 355689999999984 6689999999999999999999999999999999887762 5899999999999999999999
Q ss_pred hcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcccCC-----CCCceEEEEEccceEEEEEcCcChh
Q 012802 142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-----DGPYHVQTLHEPIGVAGQIIPWNFP 216 (456)
Q Consensus 142 ~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-----~~~~~~~~~~~P~GVv~~i~p~n~P 216 (456)
+++++|++++++|+|||..++. .|+..+++.++|++...++..+..... ..+...++.++|+|||++|+|||||
T Consensus 90 ~~~~~la~~~~~etGk~~~~a~-~Ev~~~i~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~N~P 168 (499)
T d1ky8a_ 90 RNLDVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYP 168 (499)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHGGGGGGTTTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCSSSH
T ss_pred HhHHHHHHHHHHHhCCCHHHHh-hhhhcccccccchhhhhhhhhhceeccccccccccccceeeeecccccccccccccc
Confidence 9999999999999999999986 599999999999999888775543221 2356678999999999999999999
Q ss_pred HHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHH
Q 012802 217 LLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGK 296 (456)
Q Consensus 217 ~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~ 296 (456)
+...++++++||++||+||+|||+.+|+++..+++++.++|+|+++++++.+++. .+..|..|+.|+.+.||||+..++
T Consensus 169 ~~~~~~~~~~ALaaGn~Vi~Kps~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~-~~~~l~~~~~i~~v~ftGs~~~g~ 247 (499)
T d1ky8a_ 169 LFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGK-EAEKIVADDRVAAVSFTGSTEVGE 247 (499)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCCCGG-GGHHHHHCTTCCEEEEESCHHHHH
T ss_pred chhhhhcchhhhcccccccccccccchhhhhhhccccccccccceeeecccCChH-HHHHHhhccceeEEEeecccccce
Confidence 9999999999999999999999999999999999999999999999999998654 568899999999999999999999
Q ss_pred HHHHHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhccc
Q 012802 297 IVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 376 (456)
Q Consensus 297 ~i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~ 376 (456)
.+.+.++ .+|+++|+||+||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++
T Consensus 248 ~i~~~~~---~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~d~f~~~l~~~~~~l~~ 324 (499)
T d1ky8a_ 248 RVVKVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRV 324 (499)
T ss_dssp HHHHHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHTCCB
T ss_pred EEeeccc---ccceEEecCCCCeEEEcCCcChhhhhhhhhhhhhccCcccccccccccccchhHHHHHHHHHHHHHhCcc
Confidence 9998764 4899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEe---eCCCCCcccccccccceeEEE
Q 012802 377 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFT---GVKDDMLIAKDEIFGPVQSIL 453 (456)
Q Consensus 377 G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~---~v~~~~~i~~~EifGPvl~v~ 453 (456)
|+|.|+.+++||+++..+++++++++++++.+|+++++||.... ..++.++++. ++.+||.+++||+||||++|+
T Consensus 325 G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~~~eE~FGPvl~v~ 402 (499)
T d1ky8a_ 325 GDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLG--PTYVQPTLVEAPADRVKDMVLYKREVFAPVASAV 402 (499)
T ss_dssp SCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEEE--TTEECCEEEECCHHHHTTSHHHHSCCCSSEEEEE
T ss_pred CCCCCccccccccchHHHHHHHHHHHHHHHHcCCEEeeeecccc--ccccccccccccccCCCCChhhhccccCceEEEE
Confidence 99999999999999999999999999999999999999997643 3344444443 456799999999999999999
Q ss_pred EeC
Q 012802 454 KYK 456 (456)
Q Consensus 454 ~~~ 456 (456)
+|+
T Consensus 403 ~~~ 405 (499)
T d1ky8a_ 403 EVK 405 (499)
T ss_dssp EES
T ss_pred EcC
Confidence 996
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=2.4e-71 Score=577.54 Aligned_cols=381 Identities=31% Similarity=0.479 Sum_probs=353.0
Q ss_pred CccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhc
Q 012802 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (456)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (456)
+++++||||+|+. ++++++++||.||+++++++.++.+|+++|+++|++||+ .|+++|.++|.++|+++++.|+++
T Consensus 2 k~~~n~I~G~~~~--~~~~~~v~~P~tg~~i~~~~~a~~~dv~~Ai~~A~~A~~--~W~~~s~~~R~~iL~~~a~~L~~~ 77 (474)
T d1euha_ 2 KQYKNYVNGEWKL--SENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQP--AWRALSYIERAAYLHKVADILMRD 77 (474)
T ss_dssp CBCCEEETTEEEC--CSSEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred ccccceecCeecC--CCCCEEEeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHhH--HHhhCCHHHHHHHHHHHHHHHHHh
Confidence 4679999999986 457899999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhhcCcc-----c-CCCCCceEEEEEccceEEEEEcCcChhH
Q 012802 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT-----A-PADGPYHVQTLHEPIGVAGQIIPWNFPL 217 (456)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~-----~-~~~~~~~~~~~~~P~GVv~~i~p~n~P~ 217 (456)
+++|++++++|+|||..++.. |+...+..++++........... . ....+...+++++|+|||++|+|||||+
T Consensus 78 ~~~la~~~~~e~Gk~~~~a~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~n~P~ 156 (474)
T d1euha_ 78 KEKIGAILSKEVAKGYKSAVS-EVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPV 156 (474)
T ss_dssp HHHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTT
T ss_pred HHHHHHHHHHHhCCCcchhcc-ccchhHHHHHHHHHHHhhhhcccccccccccccCCceeEEEeeceeEEEEeccccccc
Confidence 999999999999999999765 99999999999987665443211 1 1223566788999999999999999999
Q ss_pred HHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHH
Q 012802 218 LMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 297 (456)
Q Consensus 218 ~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~ 297 (456)
...++++++||++||+||+|||+.+|.++.+++++|.++|+|+|++|+|++++.++++.|..|++|+.|.||||+.+++.
T Consensus 157 ~~~~~~~~~aL~aGN~vV~Kps~~~~~~~~~l~~~~~eaglP~gv~~~i~g~~~~~~~~L~~~~~v~~v~ftGs~~~~~~ 236 (474)
T d1euha_ 157 NLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGER 236 (474)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHH
T ss_pred hhhhhhchhhhhccccceecccccchHHHHHHHHHHHHhCCCcCeEEEccCChHHHHHHHHhCCCccEEEecCccccccc
Confidence 99999999999999999999999999999999999999999999999999988889999999999999999999999999
Q ss_pred HHHHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccC
Q 012802 298 VLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 377 (456)
Q Consensus 298 i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G 377 (456)
+.+.++ .+|+++|+||+||+||++|||++.|++.+++++|.++||.|+++++||||++++++|+++++++...++.|
T Consensus 237 i~~~a~---~k~~~~e~gG~~~~iV~~dAdl~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~~l~~~~~~~~~~ 313 (474)
T d1euha_ 237 IGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIG 313 (474)
T ss_dssp HHHHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBS
T ss_pred hhhhcc---cceEEEecCCcceEEEECCCchhhHHHHHHHHHhhCCCCccccccccchhhhhhhhhhHhhhhhhhhcccc
Confidence 998864 58999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 378 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 378 ~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
++.+. .+++|++.....+++.+++..+...|+..+.++. ..|+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 314 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~ 388 (474)
T d1euha_ 314 NPEDD-ADITPLIDTKSADYVEGLINDANDKGATALTEIK---REGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVT 388 (474)
T ss_dssp CGGGT-CSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCC---EETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred Ccccc-cccccccchHHHHHHHHHHHhhhcccccccccCC---CCCCCcCCEEEecCCCcchhhhcccCCcEEEEEEeC
Confidence 99875 4679999999999999999999999998876654 368999999999999999999999999999999995
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=8e-66 Score=530.96 Aligned_cols=339 Identities=28% Similarity=0.377 Sum_probs=306.4
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhccchHHHHHHHHHHHHHhHhh
Q 012802 105 VNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI 184 (456)
Q Consensus 105 v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~ 184 (456)
|++|++.|++||+ .|+.+|.++|.++|+++++.|++++++|++++++|+|||..++...|+..+++.+++++......
T Consensus 2 v~~av~~Ar~Af~--~w~~~s~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~GK~~~ea~~~ev~~~i~~~~~~~~~~~~~ 79 (446)
T d1ad3a_ 2 ISDTVKRAREAFN--SGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDW 79 (446)
T ss_dssp HHHHHHHHHHHHH--TTGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH--hhCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7899999999999 99999999999999999999999999999999999999999987779999999999998776654
Q ss_pred cCcc----cCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHHHHHHHcCCCC
Q 012802 185 QGLT----APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPP 260 (456)
Q Consensus 185 ~~~~----~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~~~l~~aGlP~ 260 (456)
.... .....+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.++++++.+ ++|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~vi~Kps~~~p~~~~~~~~~~~~-~~~~ 158 (446)
T d1ad3a_ 80 AEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQ-YMDQ 158 (446)
T ss_dssp HSCEECCCCSTTTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHH-HSCT
T ss_pred hcccccccCCCCCCcceEEEeecceeEecccccccccccccccccccchhcccccccccceeccccccccccccc-cccc
Confidence 3221 1123456678899999999999999999999999999999999999999999999999999999977 5999
Q ss_pred CeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceEeccCCCHHHHHHHHHHHHh
Q 012802 261 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALF 340 (456)
Q Consensus 261 gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~iV~~daD~d~aa~~i~~~~~ 340 (456)
++++++.+.+... ..+. ++.+|.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|
T Consensus 159 ~~~~~~~~~~~~~-~~~~-~~~~~~v~fTGs~~~G~~i~~~aa~-~~~~~~lElgG~np~iV~~dADl~~Aa~~iv~~~~ 235 (446)
T d1ad3a_ 159 NLYLVVKGGVPET-TELL-KERFDHIMYTGSTAVGKIVMAAAAK-HLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF 235 (446)
T ss_dssp TTEEECCCSHHHH-HHHT-TSCCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCCCCEEEECSSSCHHHHHHHHHHHHH
T ss_pred cccccccccchhh-hhhc-ccccCceEEECcHHHHHHHHHHHHh-cCCcEEEECCCcCcEEEecCCchHHHHHHHHHHHh
Confidence 9999999865544 3444 5689999999999999999999987 88999999999999999999999999999999999
Q ss_pred ccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccC
Q 012802 341 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 420 (456)
Q Consensus 341 ~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~ 420 (456)
.|+||.|++++|||||++++|+|+++|.++++.+ +|+|.++.+++||++++.+++++..++++++ ...|+. ..
T Consensus 236 ~~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~-~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a~-----~~~g~~-~~ 308 (446)
T d1ad3a_ 236 MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGLIDNQK-----VAHGGT-WD 308 (446)
T ss_dssp TTTTCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTSCCCSCHHHHHHHHHTTTTSC-----EEECCC-EE
T ss_pred cCCCCccccCCccccccchhHHHHHhhhhhhhee-ecccccccccccchhhhhhhhhhhccccchh-----ccccee-ec
Confidence 9999999999999999999999999999999887 8999999999999999999999988876543 443443 34
Q ss_pred CCCceEecEEEeeCCCCCcccccccccceeEEEEeC
Q 012802 421 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (456)
Q Consensus 421 ~~g~~~~PTvl~~v~~~~~i~~~EifGPvl~v~~~~ 456 (456)
.+++|+.|||+.+++++|++++||+||||++|++|+
T Consensus 309 ~~~~~~~Ptil~~v~~~~~~~~eE~FgPVl~v~~~~ 344 (446)
T d1ad3a_ 309 QSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVR 344 (446)
T ss_dssp TTTTEECCEEECSCCTTSGGGTSCCCSSEECEEECS
T ss_pred CCCCCcCCEEEECCCCCCHHHhCcccCcceEEEEec
Confidence 568999999999999999999999999999999986
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=2e-66 Score=542.76 Aligned_cols=360 Identities=23% Similarity=0.318 Sum_probs=310.5
Q ss_pred CCeeeeecCCCCCEEE-EEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCC
Q 012802 80 GKTFPTLDPRTGDVIT-HVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKP 158 (456)
Q Consensus 80 ~~~~~v~~P~tge~i~-~v~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~ 158 (456)
+++|+++||+|||+|+ +++.++.+|+++|+++|++||. .|++++.++|.++|+++++.|++++++|++++++|+|||
T Consensus 2 ~~~f~~~nP~tge~l~~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gkp 79 (504)
T d1ez0a_ 2 DNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR--DFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALP 79 (504)
T ss_dssp CCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC
T ss_pred CCeEEEECCCCCCCcchhccCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4689999999999997 7999999999999999999999 999999999999999999999999999999999999999
Q ss_pred hhhhhccchHHHHHHHHHHHHHhHhhcCccc------C---CCCCceEEEEEccceEEEEEcCcChhHHHH--HHHHhhh
Q 012802 159 FEQSAQTEVPMTTRLFRYYAGWADKIQGLTA------P---ADGPYHVQTLHEPIGVAGQIIPWNFPLLMF--AWKVGPA 227 (456)
Q Consensus 159 ~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~------~---~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~--~~~l~~A 227 (456)
+.++. .|+..+++.++||+++.++...... + .......+..++|+|||++|+|||||+... .+++++|
T Consensus 80 ~~~a~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwNfPl~~~~~~~~~a~A 158 (504)
T d1ez0a_ 80 EVRLT-GEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASA 158 (504)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHH
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHhhhccccccccccccccccCcccceeEEEecCceEEEEecccccchhhhhhHHHHHH
Confidence 99986 5999999999999998876543221 1 112456778899999999999999998654 4699999
Q ss_pred hhcCCEEEeecCCCChhHHHHHHHH----HHHcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHh
Q 012802 228 LACGNTIVLKTAEQTPLSALYVSKL----LHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (456)
Q Consensus 228 LaaGN~VVlkps~~~p~~~~~l~~~----l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa 303 (456)
|++||+||+|||+.+|.++.++.++ +.++|+|+|++|+|+|++.++++.|++||+|++|+||||+.+|+.|.+.++
T Consensus 159 LaaGN~VVlKPs~~tp~ta~~~~~li~~a~~~aGlP~Gv~~~v~g~~~~~g~~L~~~p~v~~V~FTGS~~~g~~i~~~aa 238 (504)
T d1ez0a_ 159 LAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAH 238 (504)
T ss_dssp HHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHhccceecCcccccchhhhhhhHHHHHhhhhccccCceecccccccccccccccccccceeeeccchHHHHHHHhhhh
Confidence 9999999999999999998776555 567799999999999988899999999999999999999999999999998
Q ss_pred hCCCCc--EEEecCCCCceEeccCCCHHHHH--HHHHHHHhccCCCcccCCceeEeccchHH-HHHHHHHHHhhhcccCC
Q 012802 304 KSNLKP--VTLELGGKSPFIVCEDADVDKAA--ELAHYALFFNQGQCCCAGSRTFVHESVYD-QFVEKANALAMKRVVGD 378 (456)
Q Consensus 304 ~~~~~p--v~lelgG~~~~iV~~daD~d~aa--~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d-~f~~~l~~~~~~~~~G~ 378 (456)
+ +++| +++|+|||||+||++|||++.|+ +.++.++|.|+||.|++++|+||+++.++ .|++.+.+.++. +
T Consensus 239 ~-~~~~~~l~~ElGGknp~iV~~dAd~~~Aa~~~~~~~~~~~~~GQ~C~a~~rv~v~~~~~~~~~~~~~~~~~~~---~- 313 (504)
T d1ez0a_ 239 E-RPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQ---Q- 313 (504)
T ss_dssp H-SSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHH---C-
T ss_pred c-ccccccccccccccccccccccccHHHHhhhhccccchhhccCccccccccccchhhhhHHHHhhhhhhhhhh---c-
Confidence 8 6666 45699999999999999999875 47899999999999999999998877554 576666665543 2
Q ss_pred CCCCCCccccCCCHHHHHHHHHHHHHHhhCCCEEEeCCcccCCCCceEecEEEee---CCCCCcccccccccceeEEEEe
Q 012802 379 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTG---VKDDMLIAKDEIFGPVQSILKY 455 (456)
Q Consensus 379 p~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~---v~~~~~i~~~EifGPvl~v~~~ 455 (456)
++++.+||+++..+++++ ++.+..+|+.+..||.. +.+..|+++.. +..++++++||+||||++|++|
T Consensus 314 --~~~~~~gp~i~~~~~~~v---i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~eE~FGPvl~i~~~ 384 (504)
T d1ez0a_ 314 --SPSTLLTPGIRDSYQSQV---VSRGSDDGIDVTFSQAE----SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVC 384 (504)
T ss_dssp --CCBCCSSHHHHHHHHHHH---HHHHTSTTEEEEECCCC----TTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEE
T ss_pred --ccccccccchhhhhhhhh---hhhhhhhhhhccccccc----ccccCCccccccccccccchhhcccccCCeeeeeec
Confidence 457889999998887765 66677889999988753 44555655543 3457899999999999999999
Q ss_pred C
Q 012802 456 K 456 (456)
Q Consensus 456 ~ 456 (456)
+
T Consensus 385 ~ 385 (504)
T d1ez0a_ 385 E 385 (504)
T ss_dssp S
T ss_pred C
Confidence 5
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=6.8e-48 Score=393.47 Aligned_cols=269 Identities=18% Similarity=0.160 Sum_probs=221.5
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHhcCCChhhhhccc------------hHHH
Q 012802 103 EDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTE------------VPMT 170 (456)
Q Consensus 103 ~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~e------------v~~~ 170 (456)
+|++++++.|++||+ .|+++|..+|.++|+++++.|++|+++|++++++|+||+..++.. | +..+
T Consensus 1 ee~~~a~~~A~~Af~--~w~~~s~~eR~~iL~k~a~~l~~~~~eia~~~~~e~gk~~~~~~~-e~~~~rl~~~~~~i~~~ 77 (414)
T d1o20a_ 1 DELLEKAKKVREAWD--VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVK-ESLVDRLALNDKRIDEM 77 (414)
T ss_dssp CHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCC-HHHHHHHCCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhHHhcccc-HHHHHHHhccHHHHHHH
Confidence 578999999999999 999999999999999999999999999999999999999877543 3 5567
Q ss_pred HHHHHHHHHHhHhhcCcccCCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHHH
Q 012802 171 TRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVS 250 (456)
Q Consensus 171 ~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l~ 250 (456)
++.+++++...+...+...+..........++|+|+++++.|||||+.+.++++++||++||+||+|||+.+|.++..++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~~~ 157 (414)
T d1o20a_ 78 IKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIV 157 (414)
T ss_dssp HHHHHHHHHSCCCTTCEEEEEECTTSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHH
T ss_pred HHHHHHHHHhhhhccccccccccccccceeecccccccccccccCcHHHhhhccchheecccchhcccccccccccchhh
Confidence 77888887766555444433333445667788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHc----CCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCC-ceEeccC
Q 012802 251 KLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS-PFIVCED 325 (456)
Q Consensus 251 ~~l~~a----GlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~-~~iV~~d 325 (456)
+++.++ |+|.++++.+.+.+......+..++ .+.|+||+..++.+.+.+++ +.+++++|+||+| ++||++|
T Consensus 158 ~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~v~~~a~~-~~~~~~le~gGgn~~viv~~d 233 (414)
T d1o20a_ 158 SAIREALKETEIPESSVEFIENTDRSLVLEMIRLR---EYLSLVIPRGGYGLISFVRD-NATVPVLETGVGNCHIFVDES 233 (414)
T ss_dssp HHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCT---TTCSEEEECSCHHHHHHHHH-HCSSCBCCCCCCCEEEEECTT
T ss_pred hHHHhhhhhccccccccccccccchhhhhhccccc---ccCeEEEcccHHHHHHHhhh-ccccceecccCCCCCeecccc
Confidence 998877 5555557777765555555555443 34444444455666666666 5677888888766 5778899
Q ss_pred CCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhhhcccCCC
Q 012802 326 ADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379 (456)
Q Consensus 326 aD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p 379 (456)
||++.|++.++.++|.| ||.|++++|+|||+++||+|+++|.+...+..++++
T Consensus 234 Ad~~~A~~~~~~~~~~~-gq~C~a~~r~~V~~~i~d~f~~~l~~~~~~~~~~~~ 286 (414)
T d1o20a_ 234 ADLKKAVPVIINAKTQR-PGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVR 286 (414)
T ss_dssp SCHHHHHHHHHHHHHSC-TTSTTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred cchhhhhhHHHhhhhcC-CcccccccccchhHHHHHHHHHHHhHHHHHcCCccc
Confidence 99999999999999977 999999999999999999999999998888765543
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.3e-38 Score=324.82 Aligned_cols=259 Identities=18% Similarity=0.181 Sum_probs=203.2
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHH------hcCCChhhh-h-----ccchHHHH
Q 012802 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETW------DNGKPFEQS-A-----QTEVPMTT 171 (456)
Q Consensus 104 ~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~------e~Gk~~~~a-~-----~~ev~~~~ 171 (456)
+++++++.|++|++ .|+.++.++|.++|+++++.|++++++|+++... +.|++...- + ...+...+
T Consensus 4 ~~e~~~~~Ak~A~~--~l~~~s~~~R~~iL~~~a~~L~~~~~eI~~aN~~Dl~~a~~~g~~~~~idRL~l~~~~ri~~~~ 81 (436)
T d1vlua_ 4 SSQQIAKNARKAGN--ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVML 81 (436)
T ss_dssp HHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHH
T ss_pred HHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHcCCcHHHHHHHhcCchHHHHHHH
Confidence 46788899999999 9999999999999999999999999999886544 445542210 0 01244455
Q ss_pred HHHHHHHHHhHhhcCccc--CCCCCceEEEEEccceEEEEEcCcChhHHHHHHHHhhhhhcCCEEEeecCCCChhHHHHH
Q 012802 172 RLFRYYAGWADKIQGLTA--PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 249 (456)
Q Consensus 172 ~~l~~~a~~~~~~~~~~~--~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~~~~~l 249 (456)
+.++..+.+.+....... ..+.+...+..+.|+||+++| ||++| ..++.+.++||++||+|||||++.++.++..+
T Consensus 82 ~~l~~i~~~~dpvg~~~~~~~~~~gl~~~~~~~P~GVigiI-~e~~P-~vt~~~~~lalksGNavIlk~~~~a~~s~~~l 159 (436)
T d1vlua_ 82 QGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVI-FESRP-EVIANITALSIKSGNAAILKGGKESVNTFREM 159 (436)
T ss_dssp HHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEE-ESSCT-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHHhccccceeEeeeeeccccceEEEeeeeeeeeecc-ccccc-hhhhhhhhcccccCCcceecCCcccccCHHHH
Confidence 666655554332211110 123567788899999999988 66777 66677889999999999999999999999988
Q ss_pred HHHHH--------HcCCCCCeEEEecCCchHHHHHHHcCCCccEEEEeCChHHHHHHHHHHhhCCCCcEEEecCCCCceE
Q 012802 250 SKLLH--------EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321 (456)
Q Consensus 250 ~~~l~--------~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGS~~~g~~i~~~aa~~~~~pv~lelgG~~~~i 321 (456)
+++++ ++|+|+|+++++++ +.+.+..|..|++||.|+||||...++.+.+. ..+|++.++||++|+|
T Consensus 160 ~~~~~~al~~a~~~aGlP~~~i~~v~~-~~~v~~~l~~~~~Id~ii~tGg~~lv~~v~~~----~~~pvi~~~~G~~~~~ 234 (436)
T d1vlua_ 160 AKIVNDTIAQFQSETGVPVGSVQLIET-RQDVSDLLDQDEYIDLVVPRGSNALVRKIKDT----TKIPVLGHADGICSIY 234 (436)
T ss_dssp HHHHHHHHHHHHHHHCCCTTSEEECCC-C--CGGGGGCTTTCCEEEEESCHHHHHHHHHT----CCSCBTTBCSCCEEEE
T ss_pred HHHHHHhhhhhccccCCCCceEEEecc-hhHHHHHhccCCCCceEEEecCCceeeeeecc----ccceEEEecCCcccee
Confidence 77764 66999999999987 45678899999999999999999998887655 3369999999999999
Q ss_pred eccCCCHHHHHHHHHHHHhccCCCcccCCceeEeccchHHHHHHHHHHHhh
Q 012802 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAM 372 (456)
Q Consensus 322 V~~daD~d~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~ 372 (456)
|++|||+|.|++.++.++|.+.|| |++.++++||+++++.|...+....+
T Consensus 235 Vd~~ADl~~A~~~i~~ak~~~~g~-C~a~e~llV~e~ia~~~~~~~~~~~~ 284 (436)
T d1vlua_ 235 LDEDADLIKAKRISLDAKTNYPAG-CNAMETLLINPKFSKWWEVLENLTLE 284 (436)
T ss_dssp ECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTSTTHHHHHHHHHHH
T ss_pred ecccccHHHHHHHHHHHhccCCCc-cccccceeecHhhhhhhhhhHHHHHh
Confidence 999999999999999999999996 88999999999999887655544333
|