Citrus Sinensis ID: 012824

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450------
MLDGMFSFVLLDTRDKSFIAARDAIGVTPLYMGWGLDGSIWFASEMKALSDDCERFISFPPGHIYSSKQGGLRRWYNPPCYSEQIPSNPYDPLVLRKAFEKAVVKRLMTDVPFGVLLSGGLDSSLVAAVASRYLADSEAACQWGSQLHSFCIGLEGSPDLKAAREVADYLGTRHHEFHFTVQEGIDALEEVIYHIETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHQETCRKIKALHLYDCLRANKSTSAWGVEARVPFLDKEFINTAMSIDPEWKMVRPDLGRIEKWILRNAFDDDKQPYLPKHILYRQKEQFSDGVGYSWIDGLRDHANKQVTDAMLANSSFVYPENTPTTKEAYYYRTIFEKFFPKNAARATVPGGPSVACSTAKAVEWDAAWSKNPDPSGRAALGVHAAAYEEAVDTKPANPVNGPLQ
cccccEEEEEEEccccEEEEEccccccccEEEEECcccCEEEEEcHHHHHHcccccEECccccEEEECcccEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHccccccEEEEcccccccHHHHHHHHHHHcccEEEEEEcHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHcccEEEECccccHHHcccccHHcccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHccccccccccccccccHHHHHHHHHccccccccccHHHHccccccccccccccHHHHHHHHHHHHHcHHHHHcccccccccccccHHHHHHHHHHHHHcccHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccccc
MLDGMFSFVLLDTRDKSFIAARDAIGVTPLYMGWGLDGSIWFASEMKALSDDCERFISFPPGHIYSSKQGGLRRWYNPPCYSEQIPSNPYDPLVLRKAFEKAVVKRLMTDVPFGVLLSGGLDSSLVAAVASRYLADSEAACQWGSQLHSFCIGLEGSPDLKAAREVADYLGTRHHEFHFTVQEGIDALEEVIYHIETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHQETCRKIKALHLYDCLRANKSTSAWGVEARVPFLDKEFINTAMSIDPEWKMVRPDLGRIEKWILRNAFDDDKQPYLPKHILYRQKEQFSDGVGYSWIDGLRDHANKQVTDAMLANSSFVYPENTPTTKEAYYYRTIFEKFFPKNAARATVPGGPSVACSTAKAVEWDAAWSKNPDPSGRAALGVHAA*******************
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MLDGMFSFVLLDTRDKSFIAARDAIGVTPLYMGWGLDGSIWFASEMKALSDDCERFISFPPGHIYSSKQGGLRRWYNPPCYSEQIPSNPYDPLVLRKAFEKAVVKRLMTDVPFGVLLSGGLDSSLVAAVASRYLADSEAACQWGSQLHSFCIGLEGSPDLKAAREVADYLGTRHHEFHFTVQEGIDALEEVIYHIETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHQETCRKIKALHLYDCLRANKSTSAWGVEARVPFLDKEFINTAMSIDPEWKMVRPDLGRIEKWILRNAFDDDKQPYLPKHILYRQKEQFSDGVGYSWIDGLRDHANKQVTDAMLANSSFVYPENTPTTKEAYYYRTIFEKFFPKNAARATVPGGPSVACSTAKAVEWDAAWSKNPDPSGRAALGVHAAAYEEAVDTKPANPVNGPLQ

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Asparagine synthetase [glutamine-hydrolyzing] 2 probableQ43011
Asparagine synthetase [glutamine-hydrolyzing] 3 Essential for nitrogen assimilation, distribution and remobilization within the plant via the phloem.probableQ9LFU1
Asparagine synthetase [glutamine-hydrolyzing] probableO24661

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
6.-.-.-Ligases.probable
6.3.-.-Forming carbon-nitrogen bonds.probable
6.3.5.-Carbon--nitrogen ligases with glutamine as amido-N-donor.probable
6.3.5.4Asparagine synthase (glutamine-hydrolyzing).probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1CT9, chain A
Confidence level:very confident
Coverage over the Query: 1-134,147-402
View the alignment between query and template
View the model in PyMOL