Citrus Sinensis ID: 012824

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450------

MLDGMFSFVLLDTRDKSFIAARDAIGVTPLYMGWGLDGSIWFASEMKALSDDCERFISFPPGHIYSSKQGGLRRWYNPPCYSEQIPSNPYDPLVLRKAFEKAVVKRLMTDVPFGVLLSGGLDSSLVAAVASRYLADSEAACQWGSQLHSFCIGLEGSPDLKAAREVADYLGTRHHEFHFTVQEGIDALEEVIYHIETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHQETCRKIKALHLYDCLRANKSTSAWGVEARVPFLDKEFINTAMSIDPEWKMVRPDLGRIEKWILRNAFDDDKQPYLPKHILYRQKEQFSDGVGYSWIDGLRDHANKQVTDAMLANSSFVYPENTPTTKEAYYYRTIFEKFFPKNAARATVPGGPSVACSTAKAVEWDAAWSKNPDPSGRAALGVHAAAYEEAVDTKPANPVNGPLQ

cccccEEEEEEEccccEEEEEccccccccEEEEEEcccEEEEEEcHHHHHHcccccEEEccccEEEEEcccEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHccccccEEEEcccccccHHHHHHHHHHHcccEEEEEEcHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHcccEEEEEccccHHHcccccHHHccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHccccccccccccccccHHHHHHHHHccccccccccHHHHccccccccccccccHHHHHHHHHHHHHcHHHHHcccccccccccccHHHHHHHHHHHHHcccHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccccc

ccccEEEEEEEcccccEEEEEEccccEEEEEEcccccccEEEHHHHHHHcccccHEEEcccccEEEcccccEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHcccccEEEEcccccHHHHHHHHHHHHccccHHHcccccccEEEEcccccHHHHHHHHHHHHHcccccEEEEEHHHHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHcccEEEEcccccHHHHccEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHcccHHHHcccccccHHHHHHHHHHccccccccccHHHHHHHHHHccccccHHHHHHHHHHHHHHccHHHHHccHHcccccccccHHHHHHHHHHHHHcccHHHHHHccccccEEcccHHHHHHcHHHHcccccccHHHHHHHHHHHHHHHccccccccccccc

MLDGMFSFVLLDTRDKSFIAARDaigvtplymgwgldgsIWFASEMKALSDdcerfisfppghiysskqgglrrwynppcyseqipsnpydplVLRKAFEKAVVKRLMTDVPFGVLLSGGLDSSLVAAVASRYLADSEAACQWGSQLHSFciglegspdlKAAREVADYLGTRHHEFHFTVQEGIDALEEVIYHIETYdvttirastpmfLMSRKIKSLGVKMVIsgegsdeifggylyfhkapnkeefHQETCRKIKALHLYDCLRANkstsawgvearvpfldkefintamsidpewkmvrpdlgRIEKWILRnafdddkqpylpkhilyrqkeqfsdgvgyswiDGLRDHANKQVTDAMLAnssfvypentpttkeAYYYRTIFEkffpknaaratvpggpsvacSTAKAVewdaawsknpdpsgraaLGVHAAAYEeavdtkpanpvngplq

MLDGMFSFVLLDTRDKSFIAARDAIGVTPLYMGWGLDGSIWFASEMKALSDDCERFISFPPGHIYSSKQGGLRRWYNPPCYSEQIPSNPYDPLVLRKAFEKAVVKRLMTDVPFGVLLSGGLDSSLVAAVASRYLADSEAACQWGSQLHSFCIGLEGSPDLKAAREVADYLGTRHHEFHFTVQEGIDALEEVIYHIETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHQETCRKIKALHLYDCLRANKstsawgvearvPFLDKEFINTamsidpewkmvrPDLGRIEKWILRNAFDDDKQPYLPKHILYRQKEQFSDGVGYSWIDGLRDHANKQVTDAMLAnssfvypentptTKEAYYYRTIFEKFFPKNAARATVPGGPSVACSTAKAVEWDAAWSKNPDPSGRAALGVHAAAYEeavdtkpanpvngplq

MLDGMFSFVLLDTRDKSFIAARDAIGVTPLYMGWGLDGSIWFASEMKALSDDCERFISFPPGHIYSSKQGGLRRWYNPPCYSEQIPSNPYDPLVLRKAFEKAVVKRLMTDVPFgvllsggldsslvAAVASRYLADSEAACQWGSQLHSFCIGLEGSPDLKAAREVADYLGTRHHEFHFTVQEGIDALEEVIYHIETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHQETCRKIKALHLYDCLRANKSTSAWGVEARVPFLDKEFINTAMSIDPEWKMVRPDLGRIEKWILRNAFDDDKQPYLPKHILYRQKEQFSDGVGYSWIDGLRDHANKQVTDAMLANSSFVYPENTPTTKEAYYYRTIFEKFFPKNAARATVPGGPSVACSTAKAVEWDAAWSKNPDPSGRAALGVHAAAYEEAVDTKPANPVNGPLQ

****MFSFVLLDTRDKSFIAARDAIGVTPLYMGWGLDGSIWFASEMKALSDDCERFISFPPGHIYSSKQGGLRRWYNPPCYSEQIPSNPYDPLVLRKAFEKAVVKRLMTDVPFGVLLSGGLDSSLVAAVASRYLADSEAACQWGSQLHSFCIGLEGSPDLKAAREVADYLGTRHHEFHFTVQEGIDALEEVIYHIETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHQETCRKIKALHLYDCLRANKSTSAWGVEARVPFLDKEFINTAMSIDPEWKMVRPDLGRIEKWILRNAFDDDKQPYLPKHILYRQKEQFSDGVGYSWIDGLRDHANKQVTDAMLANSSFVYPENTPTTKEAYYYRTIFEKFFPKNAARATVPGGPSVACSTAKAVEWDAAW************************************

*LDGMFSFVLLDTRDKSFIAARDAIGVTPLYMGWGLDGSIWFASEMKALSDDCERFISFPPGHIYSSKQGGLRRWYNPPCYSEQIPSNPYDPLVLRKAFEKAVVKRLMTDVPFGVLLSGGLDSSLVAAVASRYLADSEAACQWGSQLHSFCIGLEGSPDLKAAREVADYLGTRHHEFHFTVQEGIDALEEVIYHIETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHQETCRKIKALHLYDCLRANKSTSAWGVEARVPFLDKEFINTAMSIDPEWKMVRPDLGRIEKWILRNAFDDDKQPYLPKHILYRQKEQFSDGVGYSWIDGLRDHANKQVTDAMLANSSFVYPENTPTTKEAYYYRTIFEKFFPKNAARATVPGGPSVACSTAKAVEWDAAWSKNPDPSGRAALGVHAAAYEEAVD************

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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iiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		456	2.2.26 [Sep-21-2011]
Q9LFU1		578	Asparagine synthetase [gl	yes	no	0.980	0.773	0.866	0.0
Q43011		591	Asparagine synthetase [gl	yes	no	0.989	0.763	0.852	0.0
Q9LV77		578	Asparagine synthetase [gl	no	no	0.956	0.754	0.880	0.0
P31752		590	Asparagine synthetase [gl	N/A	no	0.964	0.745	0.809	0.0
O24661		586	Asparagine synthetase [gl	N/A	no	0.971	0.755	0.801	0.0
P49092		586	Asparagine synthetase [gl	N/A	no	0.984	0.766	0.790	0.0
P49078		584	Asparagine synthetase [gl	no	no	0.964	0.753	0.777	0.0
P19252		583	Asparagine synthetase, ro	N/A	no	0.964	0.754	0.804	0.0
P49093		586	Asparagine synthetase [gl	N/A	no	0.989	0.769	0.767	0.0
P49091		586	Asparagine synthetase [gl	N/A	no	0.989	0.769	0.756	0.0

>sp\|Q9LFU1\|ASNS3_ARATH Asparagine synthetase [glutamine-hydrolyzing] 3 OS=Arabidopsis thaliana GN=ASN3 PE=2 SV=1	Back alignment and function desciption

 Score =  836 bits (2159), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/449 (86%), Positives = 424/449 (94%), Gaps = 2/449 (0%)

Query: 1   MLDGMFSFVLLDTRDKSFIAARDAIGVTPLYMGWGLDGSIWFASEMKALSDDCERFISFP 60
           MLDGMF+FVLLDTRDKSFIAARDAIG+TPLY+GWGLDGS+WFASEMKALSDDCE+F+ FP
Sbjct: 116 MLDGMFAFVLLDTRDKSFIAARDAIGITPLYIGWGLDGSVWFASEMKALSDDCEQFMCFP 175

Query: 61  PGHIYSSKQGGLRRWYNPPCYSEQIPSNPYDPLVLRKAFEKAVVKRLMTDVPFGVLLSGG 120
           PGHIYSSKQGGLRRWYNPP +SE +PS PYDPLV+R  FEKAV+KRLMTDVPFGVLLSGG
Sbjct: 176 PGHIYSSKQGGLRRWYNPPWFSEVVPSTPYDPLVVRNTFEKAVIKRLMTDVPFGVLLSGG 235

Query: 121 LDSSLVAAVASRYLADSEAACQWGSQLHSFCIGLEGSPDLKAAREVADYLGTRHHEFHFT 180
           LDSSLVA+VA R+L  SEAACQWGS+LH+FCIGL+GSPDLKA REVADYLGTRHHE HFT
Sbjct: 236 LDSSLVASVALRHLEKSEAACQWGSKLHTFCIGLKGSPDLKAGREVADYLGTRHHELHFT 295

Query: 181 VQEGIDALEEVIYHIETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYF 240
           VQ+GIDA+EEVIYH+ETYDVTTIRASTPMFLMSRKIKSLGVKMV+SGEGSDEIFGGYLYF
Sbjct: 296 VQDGIDAIEEVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMVLSGEGSDEIFGGYLYF 355

Query: 241 HKAPNKEEFHQETCRKIKALHLYDCLRANKSTSAWGVEARVPFLDKEFINTAMSIDPEWK 300
           HKAPNK+EFH+ETCRKIKALH YDCLRANKSTSAWGVEARVPFLDKEFIN AMSIDPEWK
Sbjct: 356 HKAPNKKEFHEETCRKIKALHQYDCLRANKSTSAWGVEARVPFLDKEFINVAMSIDPEWK 415

Query: 301 MVRPDLGRIEKWILRNAFDDDKQPYLPKHILYRQKEQFSDGVGYSWIDGLRDHANKQVTD 360
           M+RPDLGRIEKW+LRNAFDD+K PYLPKHILYRQKEQFSDGVGYSWIDGL+DHANK V++
Sbjct: 416 MIRPDLGRIEKWVLRNAFDDEKNPYLPKHILYRQKEQFSDGVGYSWIDGLKDHANKHVSE 475

Query: 361 AMLANSSFVYPENTPTTKEAYYYRTIFEKFFPKNAARATVPGGPSVACSTAKAVEWDAAW 420
            ML N+SFV+P+NTP TKEAYYYRTIFEKFFPK+AARATVPGGPSVACSTAKAVEWDAAW
Sbjct: 476 TMLMNASFVFPDNTPLTKEAYYYRTIFEKFFPKSAARATVPGGPSVACSTAKAVEWDAAW 535

Query: 421 SKNPDPSGRAALGVHAAAYEE--AVDTKP 447
           S+N DPSGRAALGVH +AY E    D++P
Sbjct: 536 SQNLDPSGRAALGVHVSAYGEDKTEDSRP 564

Essential for nitrogen assimilation, distribution and remobilization within the plant via the phloem.
Arabidopsis thaliana (taxid: 3702)
EC: 6EC: .EC: 3EC: .EC: 5EC: .EC: 4

>sp\|Q43011\|ASNS2_ORYSJ Asparagine synthetase [glutamine-hydrolyzing] 2 OS=Oryza sativa subsp. japonica GN=Os06g0265000 PE=2 SV=3	Back alignment and function description

>sp\|Q9LV77\|ASNS2_ARATH Asparagine synthetase [glutamine-hydrolyzing] 2 OS=Arabidopsis thaliana GN=ASN2 PE=2 SV=1	Back alignment and function description

>sp\|P31752\|ASNS_ASPOF Asparagine synthetase [glutamine-hydrolyzing] OS=Asparagus officinalis PE=2 SV=2	Back alignment and function description

>sp\|O24661\|ASNS_TRIVS Asparagine synthetase [glutamine-hydrolyzing] OS=Triphysaria versicolor GN=AS PE=2 SV=3	Back alignment and function description

>sp\|P49092\|ASNS1_LOTJA Asparagine synthetase [glutamine-hydrolyzing] 1 OS=Lotus japonicus GN=AS1 PE=2 SV=2	Back alignment and function description

>sp\|P49078\|ASNS1_ARATH Asparagine synthetase [glutamine-hydrolyzing] 1 OS=Arabidopsis thaliana GN=ASN1 PE=2 SV=2	Back alignment and function description

>sp\|P19252\|ASNS2_PEA Asparagine synthetase, root [glutamine-hydrolyzing] OS=Pisum sativum GN=AS2 PE=2 SV=3	Back alignment and function description

>sp\|P49093\|ASNS2_LOTJA Asparagine synthetase [glutamine-hydrolyzing] 2 OS=Lotus japonicus GN=AS2 PE=2 SV=2	Back alignment and function description

>sp\|P49091\|ASNS_BRAOL Asparagine synthetase [glutamine-hydrolyzing] OS=Brassica oleracea PE=2 SV=2	Back alignment and function description

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		456
TAIR\|locus:2177694		578	ASN2 "asparagine synthetase 2"	0.997	0.787	0.829	2e-214
TAIR\|locus:2145377		578	ASN3 "asparagine synthetase 3"	0.980	0.773	0.837	1.1e-213
TAIR\|locus:2099580		584	ASN1 "glutamine-dependent aspa	0.964	0.753	0.747	5.9e-192
UNIPROTKB\|P22106		554	asnB [Escherichia coli K-12 (t	0.947	0.779	0.556	8.4e-129
DICTYBASE\|DDB_G0286059		557	asns "asparagine synthetase" [	0.934	0.764	0.547	3.3e-127
UNIPROTKB\|Q9KTB2		554	VC_0991 "Asparagine synthetase	0.947	0.779	0.548	3.4e-125
TIGR_CMR\|VC_0991		554	VC_0991 "asparagine synthetase	0.947	0.779	0.548	3.4e-125
ASPGD\|ASPL0000073587		571	AN4401 [Emericella nidulans (t	0.614	0.490	0.631	7.2e-124
TIGR_CMR\|CPS_2794		554	CPS_2794 "asparagine synthase	0.945	0.777	0.542	2.1e-123
TIGR_CMR\|SO_2767		554	SO_2767 "asparagine synthetase	0.947	0.779	0.532	8.3e-122

TAIR\|locus:2177694 ASN2 "asparagine synthetase 2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 2072 (734.4 bits), Expect = 2.0e-214, P = 2.0e-214
 Identities = 380/458 (82%), Positives = 416/458 (90%)

Query:     1 MLDGMFSFVLLDTRDKSFIAARDAIGVTPLYMGWGLDGSIWFASEMKALSDDCERFISFP 60
             MLDGMF+FVLLDTRDKSFIAARDAIG+TPLY+GWGLDGS+WFASEMKALSDDCE+F+SFP
Sbjct:   116 MLDGMFAFVLLDTRDKSFIAARDAIGITPLYIGWGLDGSVWFASEMKALSDDCEQFMSFP 175

Query:    61 PGHIYSSKQGGLRRWYNPPCYSEQIPSNPYDPLVLRKAFEKAVVKRLMTDVPFXXXXXXX 120
             PGHIYSSKQGGLRRWYNPP Y+EQ+PS PYDPLVLR AFEKAV+KRLMTDVPF       
Sbjct:   176 PGHIYSSKQGGLRRWYNPPWYNEQVPSTPYDPLVLRNAFEKAVIKRLMTDVPFGVLLSGG 235

Query:   121 XXXXXXAAVASRYLADSEAACQWGSQLHSFCIGLEGSPDLKAAREVADYLGTRHHEFHFT 180
                   AAVA R+L  SEAA QWGSQLH+FCIGL+GSPDLKA REVADYLGTRHHEF FT
Sbjct:   236 LDSSLVAAVALRHLEKSEAARQWGSQLHTFCIGLQGSPDLKAGREVADYLGTRHHEFQFT 295

Query:   181 VQEGIDALEEVIYHIETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYF 240
             VQ+GIDA+EEVIYHIETYDVTTIRASTPMFLMSRKIKSLGVKMV+SGEGSDEI GGYLYF
Sbjct:   296 VQDGIDAIEEVIYHIETYDVTTIRASTPMFLMSRKIKSLGVKMVLSGEGSDEILGGYLYF 355

Query:   241 HKAPNKEEFHQETCRKIKALHLYDCLRANKSTSAWGVEARVPFLDKEFINTAMSIDPEWK 300
             HKAPNK+EFH+ETCRKIKALH +DCLRANKSTSAWGVEARVPFLDKEF+N AMSIDPEWK
Sbjct:   356 HKAPNKKEFHEETCRKIKALHQFDCLRANKSTSAWGVEARVPFLDKEFLNVAMSIDPEWK 415

Query:   301 MVRPDLGRIEKWILRNAFDDDKQPYLPKHILYRQKEQFSDGVGYSWIDGLRDHANKQVTD 360
             +++PDLGRIEKW+LRNAFDD+++PYLPKHILYRQKEQFSDGVGYSWIDGL+DHANK V+D
Sbjct:   416 LIKPDLGRIEKWVLRNAFDDEERPYLPKHILYRQKEQFSDGVGYSWIDGLKDHANKHVSD 475

Query:   361 AMLANSSFVYPENTPTTKEAYYYRTIFEKFFPKNAARATVPGGPSVACSTAKAVEWDAAW 420
              ML+N+SFV+P+NTP TKEAYYYRTIFEKFFPK+AARATVPGGPS+ACSTAKAVEWDA W
Sbjct:   476 TMLSNASFVFPDNTPLTKEAYYYRTIFEKFFPKSAARATVPGGPSIACSTAKAVEWDATW 535

Query:   421 SKNPDPSGRAALGVHAAAYEE---AVDTKPANPVNGPL 455
             SKN DPSGRAALGVH AAYEE   A   K  + +  PL
Sbjct:   536 SKNLDPSGRAALGVHVAAYEEDKAAAAAKAGSDLVDPL 573

GO:0004066 "asparagine synthase (glutamine-hydrolyzing) activity" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0006529 "asparagine biosynthetic process" evidence=IEA;IGI;ISS

GO:0097164 "ammonium ion metabolic process" evidence=IMP

GO:0005829 "cytosol" evidence=IDA

GO:0042538 "hyperosmotic salinity response" evidence=IMP

GO:0009506 "plasmodesma" evidence=IDA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0004071 "aspartate-ammonia ligase activity" evidence=IGI

TAIR\|locus:2145377 ASN3 "asparagine synthetase 3" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2099580 ASN1 "glutamine-dependent asparagine synthase 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

UNIPROTKB\|P22106 asnB [Escherichia coli K-12 (taxid:83333)]	Back alignment and assigned GO terms

DICTYBASE\|DDB_G0286059 asns "asparagine synthetase" [Dictyostelium discoideum (taxid:44689)]	Back alignment and assigned GO terms

UNIPROTKB\|Q9KTB2 VC_0991 "Asparagine synthetase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]	Back alignment and assigned GO terms

TIGR_CMR\|VC_0991 VC_0991 "asparagine synthetase B, glutamine-hydrolyzing" [Vibrio cholerae O1 biovar El Tor (taxid:686)]	Back alignment and assigned GO terms

ASPGD\|ASPL0000073587 AN4401 [Emericella nidulans (taxid:162425)]	Back alignment and assigned GO terms

TIGR_CMR\|CPS_2794 CPS_2794 "asparagine synthase (glutamine-hydrolyzing)" [Colwellia psychrerythraea 34H (taxid:167879)]	Back alignment and assigned GO terms

TIGR_CMR\|SO_2767 SO_2767 "asparagine synthetase B, glutamine-hydrolyzing" [Shewanella oneidensis MR-1 (taxid:211586)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O24661	ASNS_TRIVS	6, ., 3, ., 5, ., 4	0.8013	0.9714	0.7559	N/A	no
Q9LFU1	ASNS3_ARATH	6, ., 3, ., 5, ., 4	0.8663	0.9802	0.7733	yes	no
P31752	ASNS_ASPOF	6, ., 3, ., 5, ., 4	0.8090	0.9649	0.7457	N/A	no
Q54MB4	ASNS_DICDI	6, ., 3, ., 5, ., 4	0.5717	0.9342	0.7648	yes	no
Q43011	ASNS2_ORYSJ	6, ., 3, ., 5, ., 4	0.8520	0.9890	0.7631	yes	no
P19251	ASNS1_PEA	6, ., 3, ., 5, ., 4	0.7682	0.9868	0.7679	N/A	no
P19252	ASNS2_PEA	6, ., 3, ., 5, ., 4	0.8045	0.9649	0.7547	N/A	no
P78753	ASNS_SCHPO	6, ., 3, ., 5, ., 4	0.5506	0.9276	0.7594	yes	no
P49092	ASNS1_LOTJA	6, ., 3, ., 5, ., 4	0.7902	0.9846	0.7662	N/A	no
P49093	ASNS2_LOTJA	6, ., 3, ., 5, ., 4	0.7671	0.9890	0.7696	N/A	no
P49090	ASNS2_YEAST	6, ., 3, ., 5, ., 4	0.5476	0.9122	0.7272	yes	no
P49091	ASNS_BRAOL	6, ., 3, ., 5, ., 4	0.7560	0.9890	0.7696	N/A	no
P49094	ASNS_MAIZE	6, ., 3, ., 5, ., 4	0.7570	1.0	0.7781	N/A	no
O24338	ASNS_SANAU	6, ., 3, ., 5, ., 4	0.8015	0.8618	0.7485	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	6.3.5	0.976
3rd Layer	6.3.5.4	0.991

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	gw1.V.2829.1	SubName- Full=Putative uncharacterized protein; (566 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	estExt_fgenesh4_pm.C_LG_XVIII0241	SubName- Full=Putative uncharacterized protein; (407 aa)		•	•	0.967
	gw1.XIV.3012.1	aspartate transaminase (EC-2.6.1.1) (403 aa)		•	•	0.967
	estExt_fgenesh4_pg.C_LG_VI1672	aspartate transaminase (EC-2.6.1.1) (449 aa)		•	•	0.967
	grail3.0013044701	aspartate transaminase (EC-2.6.1.1) (466 aa)		•	•	0.967
	estExt_fgenesh4_pm.C_LG_XVIII0158	aspartate transaminase (EC-2.6.1.1) (466 aa)		•	•	0.967
	gw1.VI.2755.1	aspartate transaminase (EC-2.6.1.1) (397 aa)		•	•	0.967
	estExt_fgenesh4_pg.C_LG_VI1671	aspartate transaminase (EC-2.6.1.1) (442 aa)		•	•	0.966
	eugene3.00012554	aspartate carbamoyltransferase (EC-2.1.3.2) (332 aa)		•	•	0.921
	estExt_fgenesh4_pg.C_LG_XVI0748	adenylosuccinate synthase (EC-6.3.4.4); Plays an important role in the de novo pathway of purin [...] (491 aa)	•	•	•	0.918
	gw1.X.3427.1	hypothetical protein (424 aa)	•	•	•	0.915

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		456
PLN02549		578	PLN02549, PLN02549, asparagine synthase (glutamine	0.0
PTZ00077		586	PTZ00077, PTZ00077, asparagine synthetase-like pro	0.0
PRK09431		554	PRK09431, asnB, asparagine synthetase B; Provision	0.0
TIGR01536		466	TIGR01536, asn_synth_AEB, asparagine synthase (glu	1e-115
COG0367		542	COG0367, AsnB, Asparagine synthase (glutamine-hydr	1e-112
cd01991		269	cd01991, Asn_Synthase_B_C, The C-terminal domain o	5e-81
pfam00733		195	pfam00733, Asn_synthase, Asparagine synthase	4e-73
TIGR03104		589	TIGR03104, trio_amidotrans, asparagine synthase fa	3e-29
TIGR03108		628	TIGR03108, eps_aminotran_1, exosortase A system-as	3e-21
cd00712		220	cd00712, AsnB, Glutamine amidotransferases class-I	1e-20
pfam13537		120	pfam13537, GATase_7, Glutamine amidotransferase do	1e-18
cd00352		220	cd00352, Gn_AT_II, Glutamine amidotransferases cla	2e-18
cd01910		224	cd01910, Wali7, This domain is present in Wali7, a	7e-10
pfam12481		228	pfam12481, DUF3700, Aluminium induced protein	9e-10
TIGR03108		628	TIGR03108, eps_aminotran_1, exosortase A system-as	3e-06
pfam13522		130	pfam13522, GATase_6, Glutamine amidotransferase do	3e-06
PRK09123		479	PRK09123, PRK09123, amidophosphoribosyltransferase	1e-04
pfam06508		137	pfam06508, ExsB, ExsB	6e-04
pfam00310		223	pfam00310, GATase_2, Glutamine amidotransferases c	9e-04
PRK13981		540	PRK13981, PRK13981, NAD synthetase; Provisional	0.003

>gnl\|CDD\|178164 PLN02549, PLN02549, asparagine synthase (glutamine-hydrolyzing)	Back alignment and domain information

 Score =  928 bits (2401), Expect = 0.0
 Identities = 381/454 (83%), Positives = 412/454 (90%)

Query: 1   MLDGMFSFVLLDTRDKSFIAARDAIGVTPLYMGWGLDGSIWFASEMKALSDDCERFISFP 60
           MLDGMFSFVLLDTRD SFIAARD IG+TPLY+GWGLDGS+WFASEMKAL DDCERF  FP
Sbjct: 116 MLDGMFSFVLLDTRDNSFIAARDHIGITPLYIGWGLDGSVWFASEMKALCDDCERFEEFP 175

Query: 61  PGHIYSSKQGGLRRWYNPPCYSEQIPSNPYDPLVLRKAFEKAVVKRLMTDVPFGVLLSGG 120
           PGH YSSK GG RRWYNPP +SE IPS PYDPLVLR+AFEKAV+KRLMTDVPFGVLLSGG
Sbjct: 176 PGHYYSSKAGGFRRWYNPPWFSESIPSTPYDPLVLREAFEKAVIKRLMTDVPFGVLLSGG 235

Query: 121 LDSSLVAAVASRYLADSEAACQWGSQLHSFCIGLEGSPDLKAAREVADYLGTRHHEFHFT 180
           LDSSLVA++A+R+LA+++AA QWG QLHSFC+GLEGSPDLKAAREVADYLGT HHEFHFT
Sbjct: 236 LDSSLVASIAARHLAETKAARQWGQQLHSFCVGLEGSPDLKAAREVADYLGTVHHEFHFT 295

Query: 181 VQEGIDALEEVIYHIETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYF 240
           VQEGIDA+E+VIYH+ETYDVTTIRASTPMFLMSRKIKSLGVKMV+SGEGSDEIFGGYLYF
Sbjct: 296 VQEGIDAIEDVIYHLETYDVTTIRASTPMFLMSRKIKSLGVKMVLSGEGSDEIFGGYLYF 355

Query: 241 HKAPNKEEFHQETCRKIKALHLYDCLRANKSTSAWGVEARVPFLDKEFINTAMSIDPEWK 300
           HKAPNKEEFH+ETCRKIKALH YDCLRANKSTSAWG+EARVPFLDKEFI+ AMSIDPEWK
Sbjct: 356 HKAPNKEEFHKETCRKIKALHQYDCLRANKSTSAWGLEARVPFLDKEFIDVAMSIDPEWK 415

Query: 301 MVRPDLGRIEKWILRNAFDDDKQPYLPKHILYRQKEQFSDGVGYSWIDGLRDHANKQVTD 360
           M+RP  GRIEKW+LR AFDD++ PYLPKHIL+RQKEQFSDGVGYSWIDGL+ HA K V+D
Sbjct: 416 MIRPGEGRIEKWVLRKAFDDEEDPYLPKHILWRQKEQFSDGVGYSWIDGLKAHAEKHVSD 475

Query: 361 AMLANSSFVYPENTPTTKEAYYYRTIFEKFFPKNAARATVPGGPSVACSTAKAVEWDAAW 420
            M AN+SF YP NTPTTKEAYYYR IFEK FP++AAR TVPGGPSVACSTAKAVEWDAAW
Sbjct: 476 EMFANASFRYPHNTPTTKEAYYYRMIFEKHFPQDAARLTVPGGPSVACSTAKAVEWDAAW 535

Query: 421 SKNPDPSGRAALGVHAAAYEEAVDTKPANPVNGP 454
           SKN DPSGRAALGVH AAYEE V    A  V   
Sbjct: 536 SKNLDPSGRAALGVHVAAYEEDVAADGAPAVPKA 569

Length = 578

>gnl\|CDD\|185431 PTZ00077, PTZ00077, asparagine synthetase-like protein; Provisional	Back alignment and domain information

>gnl\|CDD\|236513 PRK09431, asnB, asparagine synthetase B; Provisional	Back alignment and domain information

>gnl\|CDD\|233454 TIGR01536, asn_synth_AEB, asparagine synthase (glutamine-hydrolyzing)	Back alignment and domain information

>gnl\|CDD\|223444 COG0367, AsnB, Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|238949 cd01991, Asn_Synthase_B_C, The C-terminal domain of Asparagine Synthase B	Back alignment and domain information

>gnl\|CDD\|216090 pfam00733, Asn_synthase, Asparagine synthase	Back alignment and domain information

>gnl\|CDD\|234108 TIGR03104, trio_amidotrans, asparagine synthase family amidotransferase	Back alignment and domain information

>gnl\|CDD\|132152 TIGR03108, eps_aminotran_1, exosortase A system-associated amidotransferase 1	Back alignment and domain information

>gnl\|CDD\|238364 cd00712, AsnB, Glutamine amidotransferases class-II (GATase) asparagine synthase_B type	Back alignment and domain information

>gnl\|CDD\|222208 pfam13537, GATase_7, Glutamine amidotransferase domain	Back alignment and domain information

>gnl\|CDD\|238212 cd00352, Gn_AT_II, Glutamine amidotransferases class-II (GATase)	Back alignment and domain information

>gnl\|CDD\|238891 cd01910, Wali7, This domain is present in Wali7, a protein of unknown function, expressed in wheat and induced by aluminum	Back alignment and domain information

>gnl\|CDD\|221596 pfam12481, DUF3700, Aluminium induced protein	Back alignment and domain information

>gnl\|CDD\|132152 TIGR03108, eps_aminotran_1, exosortase A system-associated amidotransferase 1	Back alignment and domain information

>gnl\|CDD\|222195 pfam13522, GATase_6, Glutamine amidotransferase domain	Back alignment and domain information

>gnl\|CDD\|236384 PRK09123, PRK09123, amidophosphoribosyltransferase; Provisional	Back alignment and domain information

>gnl\|CDD\|219066 pfam06508, ExsB, ExsB	Back alignment and domain information

>gnl\|CDD\|215851 pfam00310, GATase_2, Glutamine amidotransferases class-II	Back alignment and domain information

>gnl\|CDD\|237577 PRK13981, PRK13981, NAD synthetase; Provisional	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		456
KOG0571		543	consensus Asparagine synthase (glutamine-hydrolyzi	100.0
PLN02549		578	asparagine synthase (glutamine-hydrolyzing)	100.0
PTZ00077		586	asparagine synthetase-like protein; Provisional	100.0
PRK09431		554	asnB asparagine synthetase B; Provisional	100.0
TIGR03104		589	trio_amidotrans asparagine synthase family amidotr	100.0
TIGR03108		628	eps_aminotran_1 exosortase 1 system-associated ami	100.0
TIGR01536		467	asn_synth_AEB asparagine synthase (glutamine-hydro	100.0
COG0367		542	AsnB Asparagine synthase (glutamine-hydrolyzing) [	100.0
cd01991		269	Asn_Synthase_B_C The C-terminal domain of Asparagi	100.0
PF00733		255	Asn_synthase: Asparagine synthase; InterPro: IPR00	100.0
KOG0573		520	consensus Asparagine synthase [Amino acid transpor	99.97
cd01910		224	Wali7 This domain is present in Wali7, a protein o	99.83
cd01909		199	betaLS_CarA_N Glutamine amidotransferases class-II	99.78
cd00712		220	AsnB Glutamine amidotransferases class-II (GATase)	99.62
cd01996		154	Alpha_ANH_like_III This is a subfamily of Adenine	99.48
TIGR03573		343	WbuX N-acetyl sugar amidotransferase. This enzyme	99.45
PF13537		125	GATase_7: Glutamine amidotransferase domain; PDB:	99.43
cd03766		181	Gn_AT_II_novel Gn_AT_II_novel. This asparagine syn	99.2
cd00715		252	GPATase_N Glutamine amidotransferases class-II (GN	99.15
PRK08341		442	amidophosphoribosyltransferase; Provisional	99.14
PRK06388		474	amidophosphoribosyltransferase; Provisional	99.11
PRK09123		479	amidophosphoribosyltransferase; Provisional	99.09
TIGR00268		252	conserved hypothetical protein TIGR00268. The N-te	99.09
PF12481		228	DUF3700: Aluminium induced protein ; InterPro: IPR	99.08
PRK08525		445	amidophosphoribosyltransferase; Provisional	99.07
PRK07631		475	amidophosphoribosyltransferase; Provisional	99.06
PRK07847		510	amidophosphoribosyltransferase; Provisional	99.05
cd00553		248	NAD_synthase NAD+ synthase is a homodimer, which c	99.05
PRK07272		484	amidophosphoribosyltransferase; Provisional	99.03
cd00714		215	GFAT Glutamine amidotransferases class-II (Gn-AT)_	99.01
PRK07349		500	amidophosphoribosyltransferase; Provisional	99.01
TIGR00552		250	nadE NAD+ synthetase. NAD+ synthetase is a nearly	99.0
PRK14561		194	hypothetical protein; Provisional	98.99
PRK06781		471	amidophosphoribosyltransferase; Provisional	98.98
cd01907		249	GlxB Glutamine amidotransferases class-II (Gn-AT)_	98.98
cd00352		220	Gn_AT_II Glutamine amidotransferases class-II (GAT	98.98
PRK13980		265	NAD synthetase; Provisional	98.98
PLN02440		479	amidophosphoribosyltransferase	98.97
COG1606		269	ATP-utilizing enzymes of the PP-loop superfamily [	98.96
PRK00876		326	nadE NAD synthetase; Reviewed	98.93
TIGR01134		442	purF amidophosphoribosyltransferase. Alternate nam	98.91
cd01990		202	Alpha_ANH_like_I This is a subfamily of Adenine nu	98.89
PRK00331		604	glucosamine--fructose-6-phosphate aminotransferase	98.87
PRK05793		469	amidophosphoribosyltransferase; Provisional	98.86
PRK09246		501	amidophosphoribosyltransferase; Provisional	98.85
PRK00143		346	mnmA tRNA-specific 2-thiouridylase MnmA; Reviewed	98.82
TIGR01135		607	glmS glucosamine--fructose-6-phosphate aminotransf	98.79
cd01998		349	tRNA_Me_trans tRNA methyl transferase. This family	98.78
cd01993		185	Alpha_ANH_like_II This is a subfamily of Adenine n	98.75
PF06508		209	QueC: Queuosine biosynthesis protein QueC; InterPr	98.73
PRK11106		231	queuosine biosynthesis protein QueC; Provisional	98.73
COG0482		356	TrmU Predicted tRNA(5-methylaminomethyl-2-thiourid	98.71
PTZ00323		294	NAD+ synthase; Provisional	98.7
PRK04527		400	argininosuccinate synthase; Provisional	98.69
PRK14665		360	mnmA tRNA-specific 2-thiouridylase MnmA; Provision	98.68
PF03054		356	tRNA_Me_trans: tRNA methyl transferase; InterPro:	98.65
COG0603		222	Predicted PP-loop superfamily ATPase [General func	98.64
PTZ00295		640	glucosamine-fructose-6-phosphate aminotransferase;	98.63
PF02540		242	NAD_synthase: NAD synthase; InterPro: IPR022310 NA	98.62
PRK13981		540	NAD synthetase; Provisional	98.58
TIGR00420		352	trmU tRNA (5-methylaminomethyl-2-thiouridylate)-me	98.58
PRK14664		362	tRNA-specific 2-thiouridylase MnmA; Provisional	98.58
PRK00509		399	argininosuccinate synthase; Provisional	98.54
TIGR00884		311	guaA_Cterm GMP synthase (glutamine-hydrolyzing), C	98.54
TIGR00364		201	exsB protein. This protein family is represented b	98.52
cd01712		177	ThiI ThiI is required for thiazole synthesis in th	98.51
PRK00768		268	nadE NAD synthetase; Reviewed	98.49
PRK08349		198	hypothetical protein; Validated	98.47
PRK00919		307	GMP synthase subunit B; Validated	98.46
PRK13820		394	argininosuccinate synthase; Provisional	98.43
TIGR02432		189	lysidine_TilS_N tRNA(Ile)-lysidine synthetase, N-t	98.39
PLN00200		404	argininosuccinate synthase; Provisional	98.39
cd01999		385	Argininosuccinate_Synthase Argininosuccinate synth	98.38
PRK10696		258	tRNA 2-thiocytidine biosynthesis protein TtcA; Pro	98.32
PRK00074		511	guaA GMP synthase; Reviewed	98.31
cd01986		103	Alpha_ANH_like Adenine nucleotide alpha hydrolases	98.29
COG0037		298	MesJ tRNA(Ile)-lysidine synthase MesJ [Cell cycle	98.27
cd01997		295	GMP_synthase_C The C-terminal domain of GMP synthe	98.25
cd00713		413	GltS Glutamine amidotransferases class-II (Gn-AT),	98.23
cd01992		185	PP-ATPase N-terminal domain of predicted ATPase of	98.22
TIGR00032		394	argG argininosuccinate synthase. argG in bacteria,	98.19
PLN02347		536	GMP synthetase	98.19
PRK01565		394	thiamine biosynthesis protein ThiI; Provisional	98.19
PF01171		182	ATP_bind_3: PP-loop family; InterPro: IPR011063 Th	98.17
KOG2805		377	consensus tRNA (5-methylaminomethyl-2-thiouridylat	98.14
PRK02628		679	nadE NAD synthetase; Reviewed	98.14
cd01995		169	ExsB ExsB is a transcription regulator related pro	98.12
PRK08384		381	thiamine biosynthesis protein ThiI; Provisional	98.05
COG2117		198	Predicted subunit of tRNA(5-methylaminomethyl-2-th	98.04
TIGR00342		371	thiazole biosynthesis/tRNA modification protein Th	98.03
cd01994		194	Alpha_ANH_like_IV This is a subfamily of Adenine n	97.99
COG1365		255	Predicted ATPase (PP-loop superfamily) [General fu	97.98
cd01713		173	PAPS_reductase This domain is found in phosphoaden	97.98
PTZ00394		670	glucosamine-fructose-6-phosphate aminotransferase;	97.97
TIGR03679		218	arCOG00187 arCOG00187 universal archaeal metal-bin	97.97
COG0171		268	NadE NAD synthase [Coenzyme metabolism]	97.91
PRK05370		447	argininosuccinate synthase; Validated	97.91
PF00764		388	Arginosuc_synth: Arginosuccinate synthase; InterPr	97.9
PRK05253		301	sulfate adenylyltransferase subunit 2; Provisional	97.9
PLN02981		680	glucosamine:fructose-6-phosphate aminotransferase	97.87
PRK01269		482	tRNA s(4)U8 sulfurtransferase; Provisional	97.82
COG0034		470	PurF Glutamine phosphoribosylpyrophosphate amidotr	97.78
PRK08576		438	hypothetical protein; Provisional	97.77
PLN02339		700	NAD+ synthase (glutamine-hydrolysing)	97.71
PF02568		197	ThiI: Thiamine biosynthesis protein (ThiI); InterP	97.69
PRK10660		436	tilS tRNA(Ile)-lysidine synthetase; Provisional	97.63
COG0137		403	ArgG Argininosuccinate synthase [Amino acid transp	97.62
KOG0572		474	consensus Glutamine phosphoribosylpyrophosphate am	97.61
COG0367		542	AsnB Asparagine synthase (glutamine-hydrolyzing) [	97.58
TIGR02039		294	CysD sulfate adenylyltransferase, small subunit. I	97.15
PRK11750		1485	gltB glutamate synthase subunit alpha; Provisional	97.05
PRK02090		241	phosphoadenosine phosphosulfate reductase; Provisi	97.05
COG0519		315	GuaA GMP synthase, PP-ATPase domain/subunit [Nucle	96.91
PRK08557		417	hypothetical protein; Provisional	96.83
cd01908		257	YafJ Glutamine amidotransferases class-II (Gn-AT)_	96.66
PF01507		174	PAPS_reduct: Phosphoadenosine phosphosulfate reduc	96.64
TIGR03442		251	conserved hypothetical protein TIGR03442. Members	96.55
PRK12563		312	sulfate adenylyltransferase subunit 2; Provisional	96.53
PRK13794		479	hypothetical protein; Provisional	96.4
PRK13795		636	hypothetical protein; Provisional	96.33
TIGR00289		222	conserved hypothetical protein TIGR00289. Homologo	96.25
COG0301		383	ThiI Thiamine biosynthesis ATP pyrophosphatase [Co	96.23
cd01984		86	AANH_like Adenine nucleotide alpha hydrolases supe	95.92
KOG1706		412	consensus Argininosuccinate synthase [Amino acid t	95.84
TIGR00434		212	cysH phosophoadenylyl-sulfate reductase (thioredox	95.73
KOG1622		552	consensus GMP synthase [Nucleotide transport and m	94.8
TIGR02057		226	PAPS_reductase phosphoadenosine phosphosulfate red	94.78
PF09147		201	DUF1933: Domain of unknown function (DUF1933); Int	94.65
COG0175		261	CysH 3'-phosphoadenosine 5'-phosphosulfate sulfotr	94.59
TIGR03183		447	DNA_S_dndC putative sulfurtransferase DndC. Member	94.55
COG3969		407	Predicted phosphoadenosine phosphosulfate sulfotra	94.49
PRK06850		507	hypothetical protein; Provisional	94.48
COG0449		597	GlmS Glucosamine 6-phosphate synthetase, contains	94.2
KOG2303		706	consensus Predicted NAD synthase, contains CN hydr	92.91
COG2102		223	Predicted ATPases of PP-loop superfamily [General	92.62
PF01902		218	ATP_bind_4: ATP-binding region; InterPro: IPR00276	91.47
TIGR00290		223	MJ0570_dom MJ0570-related uncharacterized domain.	91.41

>KOG0571 consensus Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism]	Back alignment and domain information

Probab=100.00  E-value=5.4e-112  Score=828.39  Aligned_cols=424  Identities=70%  Similarity=1.165  Sum_probs=400.6

Q ss_pred             CcceeEEEEEEECCCCEEEEEeccCCCccEEEEEecCCeEEEecccchhhhccCccEEeCCCcEEEecCCeEEEeeCCCC
Q 012824            1 MLDGMFSFVLLDTRDKSFIAARDAIGVTPLYMGWGLDGSIWFASEMKALSDDCERFISFPPGHIYSSKQGGLRRWYNPPC   80 (456)
Q Consensus         1 ~L~G~Fa~~i~D~~~~~l~laRD~~G~~PLyy~~~~~~~~~faSeik~L~~~~~~I~~lpPG~~~~~~~~~~~~y~~~~~   80 (456)
                      .|+|||||+++|.+.++++++||++|++||||+++.+++++||||+|+|.+.|+.|..+||||++..+.+.+.||++|.|
T Consensus       116 ~LDG~Fafvl~d~~~~kv~~aRDpiGv~~lY~g~~~~gs~~~aSe~k~l~d~C~~i~~fpPgh~y~~~~~~~~r~f~p~w  195 (543)
T KOG0571|consen  116 MLDGVFAFVLLDTKDDKVVAARDPIGVTPLYYGWDSDGSVYFASEMKCLEDDCEKIESFPPGHYYTSKTGKLTRYFNPEW  195 (543)
T ss_pred             HhhhheEEEEecCCCCeEEeccCCcCceeeEEEecCCCcEEEeeehhhhhhhhhceeecCCcceeecccccccCCCCchh
Confidence            48999999999999999999999999999999999889999999999999999999999999999998888999999999


Q ss_pred             CCCCCCCCCCcHHHHHHHHHHHHHHhhhcCCCeEEeccCcccHHHHHHHHHHHhchhhhhhhcCCcccceeccCCCCchH
Q 012824           81 YSEQIPSNPYDPLVLRKAFEKAVVKRLMTDVPFGVLLSGGLDSSLVAAVASRYLADSEAACQWGSQLHSFCIGLEGSPDL  160 (456)
Q Consensus        81 ~~~~~~~~~~~~~~lr~~L~~AV~~rl~sd~~vgv~LSGGlDSs~Iaala~~~~~~~~~~~~~~~~l~tfsig~~~~~e~  160 (456)
                      .....++.+.....+|+.|++||++|||+|+|+||+||||||||+||+++++.+++.+.  +.+.++++|+||+++++|+
T Consensus       196 ~~~~~~s~p~d~~~~r~~~~~aV~KRLM~d~p~GvLLSGGLDSSLvAsia~R~lk~~~~--~~~~~lhsFaIGle~SPDL  273 (543)
T KOG0571|consen  196 FDENIPSTPLDYLALRHTLEKAVRKRLMTDVPFGVLLSGGLDSSLVASIAARELKKAQA--ARGSKLHSFAIGLEDSPDL  273 (543)
T ss_pred             hhccCCCCcccHHHHHHHHHHHHHHHhhccCceeEEeeCCchHHHHHHHHHHHHHHhhh--hcCCCceEEEecCCCChhH
Confidence            87766766666778999999999999999999999999999999999999998865322  2256899999999999999


Q ss_pred             HHHHHHHHHhCCCceEEEeChhhHHHHHHHHHHhhccCCcccccchHHHHHHHHHHHhCCCcEEEEcCchhhhccCCccc
Q 012824          161 KAAREVADYLGTRHHEFHFTVQEGIDALEEVIYHIETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYF  240 (456)
Q Consensus       161 ~~A~~vA~~lg~~h~~~~~~~~~~~~~l~~~i~~~e~~~~~~i~~~~~~~~l~~~a~~~g~~vvLsG~GgDElfgGy~~~  240 (456)
                      ..|++||+++|+.||++.++.++.+++|+++|+++|+||.++||++++||+++++++++|++|||||+|+||+||||.||
T Consensus       274 ~aarkVAd~igt~Hhe~~ft~qegidal~eVI~hLETYDvttIRastpmyLlsr~Ikk~gvkmvlSGEGsDEifggYlYf  353 (543)
T KOG0571|consen  274 LAARKVADFIGTIHHEHTFTIQEGIDALDEVIYHLETYDVTTIRASTPMYLLSRKIKKLGVKMVLSGEGSDEIFGGYLYF  353 (543)
T ss_pred             HHHHHHHHHhCCcceEEEEcHHHHHHHHHHHheeeeccccceEecCCchHHHHHHHHhcceEEEEecCCchhhhcceeee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCChHHHHHHHHHHHHhchhhhhhhhccccccCCceecCCCCCHHHHHHHhcCCccccccCCCCCCcchHHHHHhccc
Q 012824          241 HKAPNKEEFHQETCRKIKALHLYDCLRANKSTSAWGVEARVPFLDKEFINTAMSIDPEWKMVRPDLGRIEKWILRNAFDD  320 (456)
Q Consensus       241 ~~~p~~~~~~~e~~~~~~~l~~~dllr~dr~~~a~gle~r~PflD~~lve~a~slP~~~k~~~~~~~~~~K~lLR~a~~~  320 (456)
                      +++|+.++|++|+.++++.||.+||||+|+++|+||+|+|+||||++|+++|++|||++|+.....++++||+||+||..
T Consensus       354 h~APs~~~fh~E~~rrvk~Lh~~DcLRankST~a~GlE~RVPFLDk~F~~~~~sldPe~K~~k~~~~r~eK~vlrsafd~  433 (543)
T KOG0571|consen  354 HKAPSAEEFHEESVRRVKHLHLYDCLRANKSTMAHGLEARVPFLDKRFLELAMSLDPEEKMIKPKEGRIEKYVLRSAFDT  433 (543)
T ss_pred             ecCCCHHHHHHHHHHHHHHHHHHHHhhcCccccccceeeecccccHHHHHHHhcCChhHhcCCcchhhHHHHHHHhhcCC
Confidence            99999999999999999999999999999999999999999999999999999999999998755578999999999999


Q ss_pred             CCCCCCChhhhhccccCCCCCCchhhhHHHHHHHHHhcChHHHhcCCCCCCCCCCchhhHhHHHHHHHHHCCCccccccc
Q 012824          321 DKQPYLPKHILYRQKEQFSDGVGYSWIDGLRDHANKQVTDAMLANSSFVYPENTPTTKEAYYYRTIFEKFFPKNAARATV  400 (456)
Q Consensus       321 ~~~~~LP~~i~~R~K~~f~~~~~~~w~~~l~~~~~~~l~d~~l~~~~~~~~~~~p~~ke~~~~~~~~~~~~~~~~~~~~~  400 (456)
                      .+.|+||++|+||+|++|++++|++|+++|+++++..++|.++++++..+|+++|.|||+||||+||+++||++.+..++
T Consensus       434 ~~~pyLP~eilwrqkeqfsdgVgySwid~L~d~~e~~isd~m~a~a~~~fp~ntP~TkEayyYR~iFe~~fp~~~~a~~v  513 (543)
T KOG0571|consen  434 TEKPYLPDEILWRQKEQFSDGVGYSWIDGLKDHAEKQISDAMFANAAAEFPDNTPTTKEAYYYRQIFERFFPQKTAADTV  513 (543)
T ss_pred             cCCCcChHHHHHHHHhhhccccchHHHHHHHHHHHHhcCHHHHhChHhhCCCCCCCchhHHHHHHHHHHHCCcchhhhhH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999986554443


Q ss_pred             cCCcccccchhhhhhhhh--hhcCCCCCCchhhhHHhHHhhh
Q 012824          401 PGGPSVACSTAKAVEWDA--AWSKNPDPSGRAALGVHAAAYE  440 (456)
Q Consensus       401 ~~~~~~~~~~~~~~~w~~--~~~~~~~~~~r~~~~~~~~~~~  440 (456)
                                   .+|+|  +|.++.|||||++. ||..++.
T Consensus       514 -------------~~wvp~a~W~~~~Dpsgr~~~-~h~~~~~  541 (543)
T KOG0571|consen  514 -------------HKWVPKAKWGCAEDPSGRAAL-VHEKAAV  541 (543)
T ss_pred             -------------HhhcchhhccCCCCccchhHH-HHHhhhc
Confidence                         37999  99999999999876 9998864

>PLN02549 asparagine synthase (glutamine-hydrolyzing)	Back alignment and domain information

>PTZ00077 asparagine synthetase-like protein; Provisional	Back alignment and domain information

>PRK09431 asnB asparagine synthetase B; Provisional	Back alignment and domain information

>TIGR03104 trio_amidotrans asparagine synthase family amidotransferase	Back alignment and domain information

>TIGR03108 eps_aminotran_1 exosortase 1 system-associated amidotransferase 1	Back alignment and domain information

>TIGR01536 asn_synth_AEB asparagine synthase (glutamine-hydrolyzing)	Back alignment and domain information

>COG0367 AsnB Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism]	Back alignment and domain information

>cd01991 Asn_Synthase_B_C The C-terminal domain of Asparagine Synthase B	Back alignment and domain information

>PF00733 Asn_synthase: Asparagine synthase; InterPro: IPR001962 This domain is always found associated with (IPR000583 from INTERPRO)	Back alignment and domain information

>KOG0573 consensus Asparagine synthase [Amino acid transport and metabolism]	Back alignment and domain information

>cd01910 Wali7 This domain is present in Wali7, a protein of unknown function, expressed in wheat and induced by aluminum	Back alignment and domain information

>cd01909 betaLS_CarA_N Glutamine amidotransferases class-II (GATase) asparagine synthase_betaLS-type	Back alignment and domain information

>cd00712 AsnB Glutamine amidotransferases class-II (GATase) asparagine synthase_B type	Back alignment and domain information

>cd01996 Alpha_ANH_like_III This is a subfamily of Adenine nucleotide alpha hydrolases superfamily	Back alignment and domain information

>TIGR03573 WbuX N-acetyl sugar amidotransferase	Back alignment and domain information

>PF13537 GATase_7: Glutamine amidotransferase domain; PDB: 1JGT_A 1M1Z_B 1MB9_B 1MBZ_B 1MC1_A	Back alignment and domain information

>cd03766 Gn_AT_II_novel Gn_AT_II_novel	Back alignment and domain information

>cd00715 GPATase_N Glutamine amidotransferases class-II (GN-AT)_GPAT- type	Back alignment and domain information

>PRK08341 amidophosphoribosyltransferase; Provisional	Back alignment and domain information

>PRK06388 amidophosphoribosyltransferase; Provisional	Back alignment and domain information

>PRK09123 amidophosphoribosyltransferase; Provisional	Back alignment and domain information

>TIGR00268 conserved hypothetical protein TIGR00268	Back alignment and domain information

>PF12481 DUF3700: Aluminium induced protein ; InterPro: IPR024286 This entry represents a domain found in plant proteins that is approximately 120 amino acids in length	Back alignment and domain information

>PRK08525 amidophosphoribosyltransferase; Provisional	Back alignment and domain information

>PRK07631 amidophosphoribosyltransferase; Provisional	Back alignment and domain information

>PRK07847 amidophosphoribosyltransferase; Provisional	Back alignment and domain information

>cd00553 NAD_synthase NAD+ synthase is a homodimer, which catalyzes the final step in de novo nicotinamide adenine dinucleotide (NAD+) biosynthesis, an amide transfer from either ammonia or glutamine to nicotinic acid adenine dinucleotide (NaAD)	Back alignment and domain information

>PRK07272 amidophosphoribosyltransferase; Provisional	Back alignment and domain information

>cd00714 GFAT Glutamine amidotransferases class-II (Gn-AT)_GFAT-type	Back alignment and domain information

>PRK07349 amidophosphoribosyltransferase; Provisional	Back alignment and domain information

>TIGR00552 nadE NAD+ synthetase	Back alignment and domain information

>PRK14561 hypothetical protein; Provisional	Back alignment and domain information

>PRK06781 amidophosphoribosyltransferase; Provisional	Back alignment and domain information

>cd01907 GlxB Glutamine amidotransferases class-II (Gn-AT)_GlxB-type	Back alignment and domain information

>cd00352 Gn_AT_II Glutamine amidotransferases class-II (GATase)	Back alignment and domain information

>PRK13980 NAD synthetase; Provisional	Back alignment and domain information

>PLN02440 amidophosphoribosyltransferase	Back alignment and domain information

>COG1606 ATP-utilizing enzymes of the PP-loop superfamily [General function prediction only]	Back alignment and domain information

>PRK00876 nadE NAD synthetase; Reviewed	Back alignment and domain information

>TIGR01134 purF amidophosphoribosyltransferase	Back alignment and domain information

>cd01990 Alpha_ANH_like_I This is a subfamily of Adenine nucleotide alpha hydrolases superfamily	Back alignment and domain information

>PRK00331 glucosamine--fructose-6-phosphate aminotransferase; Reviewed	Back alignment and domain information

>PRK05793 amidophosphoribosyltransferase; Provisional	Back alignment and domain information

>PRK09246 amidophosphoribosyltransferase; Provisional	Back alignment and domain information

>PRK00143 mnmA tRNA-specific 2-thiouridylase MnmA; Reviewed	Back alignment and domain information

>TIGR01135 glmS glucosamine--fructose-6-phosphate aminotransferase (isomerizing)	Back alignment and domain information

>cd01998 tRNA_Me_trans tRNA methyl transferase	Back alignment and domain information

>cd01993 Alpha_ANH_like_II This is a subfamily of Adenine nucleotide alpha hydrolases superfamily	Back alignment and domain information

>PF06508 QueC: Queuosine biosynthesis protein QueC; InterPro: IPR018317 This protein family is represented by a single member in nearly every completed large (> 1000 genes) prokaryotic genome	Back alignment and domain information

>PRK11106 queuosine biosynthesis protein QueC; Provisional	Back alignment and domain information

>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>PTZ00323 NAD+ synthase; Provisional	Back alignment and domain information

>PRK04527 argininosuccinate synthase; Provisional	Back alignment and domain information

>PRK14665 mnmA tRNA-specific 2-thiouridylase MnmA; Provisional	Back alignment and domain information

>PF03054 tRNA_Me_trans: tRNA methyl transferase; InterPro: IPR004506 tRNA-specific 2-thiouridylase catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34	Back alignment and domain information

>COG0603 Predicted PP-loop superfamily ATPase [General function prediction only]	Back alignment and domain information

>PTZ00295 glucosamine-fructose-6-phosphate aminotransferase; Provisional	Back alignment and domain information

>PF02540 NAD_synthase: NAD synthase; InterPro: IPR022310 NAD+ synthase (6	Back alignment and domain information

>PRK13981 NAD synthetase; Provisional	Back alignment and domain information

>TIGR00420 trmU tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase	Back alignment and domain information

>PRK14664 tRNA-specific 2-thiouridylase MnmA; Provisional	Back alignment and domain information

>PRK00509 argininosuccinate synthase; Provisional	Back alignment and domain information

>TIGR00884 guaA_Cterm GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit	Back alignment and domain information

>TIGR00364 exsB protein	Back alignment and domain information

>cd01712 ThiI ThiI is required for thiazole synthesis in the thiamine biosynthesis pathway	Back alignment and domain information

>PRK00768 nadE NAD synthetase; Reviewed	Back alignment and domain information

>PRK08349 hypothetical protein; Validated	Back alignment and domain information

>PRK00919 GMP synthase subunit B; Validated	Back alignment and domain information

>PRK13820 argininosuccinate synthase; Provisional	Back alignment and domain information

>TIGR02432 lysidine_TilS_N tRNA(Ile)-lysidine synthetase, N-terminal domain	Back alignment and domain information

>PLN00200 argininosuccinate synthase; Provisional	Back alignment and domain information

>cd01999 Argininosuccinate_Synthase Argininosuccinate synthase	Back alignment and domain information

>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional	Back alignment and domain information

>PRK00074 guaA GMP synthase; Reviewed	Back alignment and domain information

>cd01986 Alpha_ANH_like Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases and ATP sulphurylases	Back alignment and domain information

>COG0037 MesJ tRNA(Ile)-lysidine synthase MesJ [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>cd01997 GMP_synthase_C The C-terminal domain of GMP synthetase	Back alignment and domain information

>cd00713 GltS Glutamine amidotransferases class-II (Gn-AT), glutamate synthase (GltS)-type	Back alignment and domain information

>cd01992 PP-ATPase N-terminal domain of predicted ATPase of the PP-loop faimly implicated in cell cycle control [Cell division and chromosome partitioning]	Back alignment and domain information

>TIGR00032 argG argininosuccinate synthase	Back alignment and domain information

>PLN02347 GMP synthetase	Back alignment and domain information

>PRK01565 thiamine biosynthesis protein ThiI; Provisional	Back alignment and domain information

>PF01171 ATP_bind_3: PP-loop family; InterPro: IPR011063 This entry represents the PP-loop motif superfamily [,]	Back alignment and domain information

>KOG2805 consensus tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>PRK02628 nadE NAD synthetase; Reviewed	Back alignment and domain information

>cd01995 ExsB ExsB is a transcription regulator related protein	Back alignment and domain information

>PRK08384 thiamine biosynthesis protein ThiI; Provisional	Back alignment and domain information

>COG2117 Predicted subunit of tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>TIGR00342 thiazole biosynthesis/tRNA modification protein ThiI	Back alignment and domain information

>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily	Back alignment and domain information

>COG1365 Predicted ATPase (PP-loop superfamily) [General function prediction only]	Back alignment and domain information

>cd01713 PAPS_reductase This domain is found in phosphoadenosine phosphosulphate (PAPS) reductase enzymes or PAPS sulphotransferase	Back alignment and domain information

>PTZ00394 glucosamine-fructose-6-phosphate aminotransferase; Provisional	Back alignment and domain information

>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein	Back alignment and domain information

>COG0171 NadE NAD synthase [Coenzyme metabolism]	Back alignment and domain information

>PRK05370 argininosuccinate synthase; Validated	Back alignment and domain information

>PF00764 Arginosuc_synth: Arginosuccinate synthase; InterPro: IPR001518 Argininosuccinate synthase (6	Back alignment and domain information

>PRK05253 sulfate adenylyltransferase subunit 2; Provisional	Back alignment and domain information

>PLN02981 glucosamine:fructose-6-phosphate aminotransferase	Back alignment and domain information

>PRK01269 tRNA s(4)U8 sulfurtransferase; Provisional	Back alignment and domain information

>COG0034 PurF Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism]	Back alignment and domain information

>PRK08576 hypothetical protein; Provisional	Back alignment and domain information

>PLN02339 NAD+ synthase (glutamine-hydrolysing)	Back alignment and domain information

>PF02568 ThiI: Thiamine biosynthesis protein (ThiI); InterPro: IPR020536 Thiamine pyrophosphate (TPP) is synthesized de novo in many bacteria and is a required cofactor for many enzymes in the cell	Back alignment and domain information

>PRK10660 tilS tRNA(Ile)-lysidine synthetase; Provisional	Back alignment and domain information

>COG0137 ArgG Argininosuccinate synthase [Amino acid transport and metabolism]	Back alignment and domain information

>KOG0572 consensus Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism]	Back alignment and domain information

>COG0367 AsnB Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism]	Back alignment and domain information

>TIGR02039 CysD sulfate adenylyltransferase, small subunit	Back alignment and domain information

>PRK11750 gltB glutamate synthase subunit alpha; Provisional	Back alignment and domain information

>PRK02090 phosphoadenosine phosphosulfate reductase; Provisional	Back alignment and domain information

>COG0519 GuaA GMP synthase, PP-ATPase domain/subunit [Nucleotide transport and metabolism]	Back alignment and domain information

>PRK08557 hypothetical protein; Provisional	Back alignment and domain information

>cd01908 YafJ Glutamine amidotransferases class-II (Gn-AT)_YafJ-type	Back alignment and domain information

>PF01507 PAPS_reduct: Phosphoadenosine phosphosulfate reductase family; InterPro: IPR002500 This domain is found in phosphoadenosine phosphosulphate (PAPS) reductase enzymes or PAPS sulphotransferase	Back alignment and domain information

>TIGR03442 conserved hypothetical protein TIGR03442	Back alignment and domain information

>PRK12563 sulfate adenylyltransferase subunit 2; Provisional	Back alignment and domain information

>PRK13794 hypothetical protein; Provisional	Back alignment and domain information

>PRK13795 hypothetical protein; Provisional	Back alignment and domain information

>TIGR00289 conserved hypothetical protein TIGR00289	Back alignment and domain information

>COG0301 ThiI Thiamine biosynthesis ATP pyrophosphatase [Coenzyme metabolism]	Back alignment and domain information

>cd01984 AANH_like Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases, ATP sulphurylases Universal Stress Response protein and electron transfer flavoprotein (ETF)	Back alignment and domain information

>KOG1706 consensus Argininosuccinate synthase [Amino acid transport and metabolism]	Back alignment and domain information

>TIGR00434 cysH phosophoadenylyl-sulfate reductase (thioredoxin)	Back alignment and domain information

>KOG1622 consensus GMP synthase [Nucleotide transport and metabolism]	Back alignment and domain information

>TIGR02057 PAPS_reductase phosphoadenosine phosphosulfate reductase, thioredoxin dependent	Back alignment and domain information

>PF09147 DUF1933: Domain of unknown function (DUF1933); InterPro: IPR015230 This domain is predominantly found in carbapenam synthetase, and is composed of two antiparallel six-stranded beta-sheets that form a sandwich, flanked on each side by two alpha-helices	Back alignment and domain information

>COG0175 CysH 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes [Amino acid transport and metabolism / Coenzyme metabolism]	Back alignment and domain information

>TIGR03183 DNA_S_dndC putative sulfurtransferase DndC	Back alignment and domain information

>COG3969 Predicted phosphoadenosine phosphosulfate sulfotransferase [General function prediction only]	Back alignment and domain information

>PRK06850 hypothetical protein; Provisional	Back alignment and domain information

>COG0449 GlmS Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>KOG2303 consensus Predicted NAD synthase, contains CN hydrolase domain [Coenzyme transport and metabolism; General function prediction only]	Back alignment and domain information

>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]	Back alignment and domain information

>PF01902 ATP_bind_4: ATP-binding region; InterPro: IPR002761 This domain is about 200 amino acids long with a strongly conserved motif SGGKD at the N-terminal	Back alignment and domain information

>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		456
1ct9_A		553	Crystal Structure Of Asparagine Synthetase B From E		1e-140
1q15_A		503	Carbapenam Synthetase Length = 503		7e-12
1jgt_A		513	Crystal Structure Of Beta-Lactam Synthetase Length		2e-08

>pdb|1CT9|A Chain A, Crystal Structure Of Asparagine Synthetase B From Escherichia Coli Length = 553

Back alignment and structure

Iteration: 1

Score = 496 bits (1277), Expect = e-140, Method: Compositional matrix adjust. Identities = 247/444 (55%), Positives = 315/444 (70%), Gaps = 12/444 (2%) Query: 2 LDGMFSFVLLDTRDKSFIAARDAIGVTPLYMGWGLDGSIWFASEMKALSDDCERFISFPP 61 L GMF+F L D+ +++ RD +G+ PLYMG+ G ++ ASEMKAL C FP Sbjct: 117 LQGMFAFALYDSEKDAYLIGRDHLGIIPLYMGYDEHGQLYVASEMKALVPVCRTIKEFPA 176 Query: 62 GHIYSSKQGGLRRWYNPPCYS-EQIPSNPYDPLVLRKAFEKAVVKRLMTDVPFXXXXXXX 120 G S+ G +R +Y+ + + + N D LR+A E +V LM+DVP+ Sbjct: 177 GSYLWSQDGEIRSYYHRDWFDYDAVKDNVTDKNELRQALEDSVKSHLMSDVPYGVLLSGG 236 Query: 121 XXXXXXAAVASRYLA----DSEAACQWGSQLHSFCIGLEGSPDLKAAREVADYLGTRHHE 176 +A+ +Y A D E + W QLHSF +GL GSPDLKAA+EVA++LGT HHE Sbjct: 237 LDSSIISAITKKYAARRVEDQERSEAWWPQLHSFAVGLPGSPDLKAAQEVANHLGTVHHE 296 Query: 177 FHFTVQEGIDALEEVIYHIETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGG 236 HFTVQEG+DA+ +VIYHIETYDVTTIRASTPM+LMSRKIK++G+KMV+SGEGSDE+FGG Sbjct: 297 IHFTVQEGLDAIRDVIYHIETYDVTTIRASTPMYLMSRKIKAMGIKMVLSGEGSDEVFGG 356 Query: 237 YLYFHKAPNKEEFHQETCRKIKALHLYDCLRANKSTSAWGVEARVPFLDKEFINTAMSID 296 YLYFHKAPN +E H+ET RK+ ALH+YDC RANK+ SAWGVEARVPFLDK+F++ AM I+ Sbjct: 357 YLYFHKAPNAKELHEETVRKLLALHMYDCARANKAMSAWGVEARVPFLDKKFLDVAMRIN 416 Query: 297 PEWKMVRPDLGRIEKWILRNAFDDDKQPYLPKHILYRQKEQFSDGVGYSWIDGLRDHANK 356 P+ KM G++EK ILR F + YLP + +RQKEQFSDGVGYSWID L++ A + Sbjct: 417 PQDKMCGN--GKMEKHILRECF----EAYLPASVAWRQKEQFSDGVGYSWIDTLKEVAAQ 470 Query: 357 QVTDAMLANSSFVYPENTPTTKEAYYYRTIFEKFFPKNAARATVPGGPSVACSTAKAVEW 416 QV+D L + F +P NTPT+KEAY YR IFE+ FP +A VPGGPSVACS+AKA+EW Sbjct: 471 QVSDQQLETARFRFPYNTPTSKEAYLYREIFEELFPLPSAAECVPGGPSVACSSAKAIEW 530 Query: 417 DAAWSKNPDPSGRAALGVHAAAYE 440 D A+ K DPSGR A+GVH +AY+ Sbjct: 531 DEAFKKMDDPSGR-AVGVHQSAYK 553

PyMOL of 1ct9

>pdb|1Q15|A Chain A, Carbapenam Synthetase Length = 503

Back alignment and structure

>pdb|1JGT|A Chain A, Crystal Structure Of Beta-Lactam Synthetase Length = 513

Back alignment and structure

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		456
1ct9_A		553	Asparagine synthetase B; amidotransferase, substra	0.0
1jgt_A		513	Beta-lactam synthetase; asparagine synthetase, cla	1e-171
1q15_A		503	CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS,	1e-162
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-12
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-07
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-04
3k32_A		203	Uncharacterized protein MJ0690; predicted subunit	4e-10
3bl5_A		219	Queuosine biosynthesis protein QUEC; PREQ1 biosynt	7e-04
1ao0_A		459	Glutamine phosphoribosylpyrophosphate amidotransfe	8e-04

>1ct9_A Asparagine synthetase B; amidotransferase, substrate channeling, asparagine biosynthesis, ligase; HET: AMP GLN; 2.00A {Escherichia coli} SCOP: c.26.2.1 d.153.1.1 Length = 553	Back alignment and structure

 Score =  576 bits (1487), Expect = 0.0
 Identities = 258/445 (57%), Positives = 328/445 (73%), Gaps = 12/445 (2%)

Query: 1   MLDGMFSFVLLDTRDKSFIAARDAIGVTPLYMGWGLDGSIWFASEMKALSDDCERFISFP 60
            L GMF+F L D+   +++  RD +G+ PLYMG+   G ++ ASEMKAL   C     FP
Sbjct: 116 DLQGMFAFALYDSEKDAYLIGRDHLGIIPLYMGYDEHGQLYVASEMKALVPVCRTIKEFP 175

Query: 61  PGHIYSSKQGGLRRWYNPPCYS-EQIPSNPYDPLVLRKAFEKAVVKRLMTDVPFGVLLSG 119
            G    S+ G +R +Y+   +  + +  N  D   LR+A E +V   LM+DVP+GVLLSG
Sbjct: 176 AGSYLWSQDGEIRSYYHRDWFDYDAVKDNVTDKNELRQALEDSVKSHLMSDVPYGVLLSG 235

Query: 120 GLDSSLVAAVASRYLA----DSEAACQWGSQLHSFCIGLEGSPDLKAAREVADYLGTRHH 175
           GLDSS+++A+  +Y A    D E +  W  QLHSF +GL GSPDLKAA+EVA++LGT HH
Sbjct: 236 GLDSSIISAITKKYAARRVEDQERSEAWWPQLHSFAVGLPGSPDLKAAQEVANHLGTVHH 295

Query: 176 EFHFTVQEGIDALEEVIYHIETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFG 235
           E HFTVQEG+DA+ +VIYHIETYDVTTIRASTPM+LMSRKIK++G+KMV+SGEGSDE+FG
Sbjct: 296 EIHFTVQEGLDAIRDVIYHIETYDVTTIRASTPMYLMSRKIKAMGIKMVLSGEGSDEVFG 355

Query: 236 GYLYFHKAPNKEEFHQETCRKIKALHLYDCLRANKSTSAWGVEARVPFLDKEFINTAMSI 295
           GYLYFHKAPN +E H+ET RK+ ALH+YDC RANK+ SAWGVEARVPFLDK+F++ AM I
Sbjct: 356 GYLYFHKAPNAKELHEETVRKLLALHMYDCARANKAMSAWGVEARVPFLDKKFLDVAMRI 415

Query: 296 DPEWKMVRPDLGRIEKWILRNAFDDDKQPYLPKHILYRQKEQFSDGVGYSWIDGLRDHAN 355
           +P+ KM     G++EK ILR  F+     YLP  + +RQKEQFSDGVGYSWID L++ A 
Sbjct: 416 NPQDKM--CGNGKMEKHILRECFEA----YLPASVAWRQKEQFSDGVGYSWIDTLKEVAA 469

Query: 356 KQVTDAMLANSSFVYPENTPTTKEAYYYRTIFEKFFPKNAARATVPGGPSVACSTAKAVE 415
           +QV+D  L  + F +P NTPT+KEAY YR IFE+ FP  +A   VPGGPSVACS+AKA+E
Sbjct: 470 QQVSDQQLETARFRFPYNTPTSKEAYLYREIFEELFPLPSAAECVPGGPSVACSSAKAIE 529

Query: 416 WDAAWSKNPDPSGRAALGVHAAAYE 440
           WD A+ K  DPSGR A+GVH +AY+
Sbjct: 530 WDEAFKKMDDPSGR-AVGVHQSAYK 553

PyMOL of 1ct9

>1jgt_A Beta-lactam synthetase; asparagine synthetase, clavulanic AC AMPCPP, CEA, carboxyethylarginine, hydrolase; HET: APC CMA; 1.95A {Streptomyces clavuligerus} SCOP: c.26.2.1 d.153.1.1 PDB: 1m1z_A 1mb9_A* 1mbz_A* 1mc1_A* Length = 513	Back alignment and structure

>1q15_A CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, B-lactam synthetase, AS-B, class B asparagine synthetase, AMP-CPP; 2.30A {Pectobacterium carotovorum} SCOP: c.26.2.1 d.153.1.1 PDB: 1q19_A* Length = 503	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>3k32_A Uncharacterized protein MJ0690; predicted subunit of tRNA methyltransferase, methanocaldococcus jannaschii DSM , PSI- 2; 2.50A {Methanocaldococcus jannaschii} Length = 203	Back alignment and structure

>3bl5_A Queuosine biosynthesis protein QUEC; PREQ1 biosynthesis, RNA modification, tRNA, hydrolase; 2.95A {Bacillus subtilis} Length = 219	Back alignment and structure

>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1* Length = 459	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		456
1ct9_A		553	Asparagine synthetase B; amidotransferase, substra	100.0
1jgt_A		513	Beta-lactam synthetase; asparagine synthetase, cla	100.0
1q15_A		503	CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS,	100.0
1ao0_A		459	Glutamine phosphoribosylpyrophosphate amidotransfe	99.48
1xff_A		240	D-fructose-6-, glucosamine--fructose-6-phosphate a	99.2
2e18_A		257	NH(3)-dependent NAD(+) synthetase; ligase, structu	99.16
1kqp_A		271	NAD+ synthase, NH(3)-dependent NAD(+) synthetase,	99.15
3bl5_A		219	Queuosine biosynthesis protein QUEC; PREQ1 biosynt	99.15
1xng_A		268	NH(3)-dependent NAD(+) synthetase; amidotransferas	99.14
3n05_A		590	NH(3)-dependent NAD(+) synthetase; ligase, structu	99.03
3sdb_A		680	Glutamine-dependent NAD(+) synthetase; glutamine-a	99.0
1ecf_A		504	Glutamine phosphoribosylpyrophosphate amidotransf;	98.97
3k32_A		203	Uncharacterized protein MJ0690; predicted subunit	98.96
3fiu_A		249	NH(3)-dependent NAD(+) synthetase; rossman fold, a	98.87
2bpl_A		608	Glucosamine--fructose-6-phosphate aminotransferase	98.84
1wxi_A		275	NH(3)-dependent NAD(+) synthetase; NADE, E.coli, l	98.84
3p52_A		249	NH(3)-dependent NAD(+) synthetase; structural geno	98.83
2pg3_A		232	Queuosine biosynthesis protein QUEC; YP_049261.1,	98.82
2dpl_A		308	GMP synthetase, GMP synthase [glutamine-hydrolyzin	98.64
2nz2_A		413	Argininosuccinate synthase; amino-acid biosynthesi	98.61
1wy5_A		317	TILS, hypothetical UPF0072 protein AQ_1887; N-type	98.6
2hma_A		376	Probable tRNA (5-methylaminomethyl-2-thiouridylat	98.59
1vl2_A		421	Argininosuccinate synthase; TM1780, structural gen	98.57
1kor_A		400	Argininosuccinate synthetase; ligase, riken struct	98.56
3mdn_A		274	Glutamine aminotransferase class-II domain protei;	98.55
2der_A		380	TRNA-specific 2-thiouridylase MNMA; protein-RNA co	98.44
3q4g_A		279	NH(3)-dependent NAD(+) synthetase; structural geno	98.42
1k92_A		455	Argininosuccinate synthase, argininosuccinate SY;	98.34
3tqi_A		527	GMP synthase [glutamine-hydrolyzing]; ligase; 2.84	98.23
1gpm_A		525	GMP synthetase, XMP aminase; class I glutamine ami	98.21
3a2k_A		464	TRNA(Ile)-lysidine synthase; ligase, pseudo-knot,	98.2
3dpi_A		285	NAD+ synthetase; ssgcid, decode, structural genomi	98.16
3ilv_A		634	Glutamine-dependent NAD(+) synthetase; protein str	98.15
2ywb_A		503	GMP synthase [glutamine-hydrolyzing]; GMP syntheta	98.14
1sur_A		215	PAPS reductase; assimilatory sulfate reduction, 3-	98.05
4f4h_A		565	Glutamine dependent NAD+ synthetase; structural ge	98.04
2c5s_A		413	THII, probable thiamine biosynthesis protein THII;	97.92
2vxo_A		697	GMP synthase [glutamine-hydrolyzing]; proto-oncoge	97.91
3uow_A		556	GMP synthetase; structural genomics consortium, SG	97.89
1ni5_A		433	Putative cell cycle protein MESJ; structural genom	97.84
2o8v_A		252	Phosphoadenosine phosphosulfate reductase; disulfi	97.65
1zun_A		325	Sulfate adenylyltransferase subunit 2; beta barrel	97.62
2oq2_A		261	Phosphoadenosine phosphosulfate reductase; sulfate	97.48
3rjz_A		237	N-type ATP pyrophosphatase superfamily; structural	97.47
1ea0_A		1479	Glutamate synthase [NADPH] large chain; oxidoreduc	97.32
1vbk_A		307	Hypothetical protein PH1313; structural genomics,	97.31
1ofd_A		1520	Ferredoxin-dependent glutamate synthase 2; oxidore	97.27
1te5_A		257	Conserved hypothetical protein; glutamine amidotra	96.88
2wsi_A		306	FAD synthetase; transferase, nucleotidyltransferas	96.14
2goy_A		275	Adenosine phosphosulfate reductase; iron sulfur cl	95.99
3fwk_A		308	FMN adenylyltransferase; FAD biosynthesis, alpha/b	92.79

>1ct9_A Asparagine synthetase B; amidotransferase, substrate channeling, asparagine biosynthesis, ligase; HET: AMP GLN; 2.00A {Escherichia coli} SCOP: c.26.2.1 d.153.1.1	Back alignment and structure

Probab=100.00  E-value=3.3e-93  Score=759.86  Aligned_cols=432  Identities=59%  Similarity=1.020  Sum_probs=356.9

Q ss_pred             CcceeEEEEEEECCCCEEEEEeccCCCccEEEEEecCCeEEEecccchhhhccCccEEeCCCcEEEecCCeEEEeeCCCC
Q 012824            1 MLDGMFSFVLLDTRDKSFIAARDAIGVTPLYMGWGLDGSIWFASEMKALSDDCERFISFPPGHIYSSKQGGLRRWYNPPC   80 (456)
Q Consensus         1 ~L~G~Fa~~i~D~~~~~l~laRD~~G~~PLyy~~~~~~~~~faSeik~L~~~~~~I~~lpPG~~~~~~~~~~~~y~~~~~   80 (456)
                      +|+|||||+|||.++++++++||++|+|||||+...++.++||||+++|...+++|+.|||||++.+.+++.++||++.|
T Consensus       116 ~l~G~fa~~i~d~~~~~l~~aRD~~G~~PLy~~~~~~~~~~faSe~~al~~~~~~i~~l~pG~~~~~~~g~~~~yw~~~~  195 (553)
T 1ct9_A          116 DLQGMFAFALYDSEKDAYLIGRDHLGIIPLYMGYDEHGQLYVASEMKALVPVCRTIKEFPAGSYLWSQDGEIRSYYHRDW  195 (553)
T ss_dssp             GCCEEEEEEEEETTTTEEEEEECTTCCSCCEEEECTTCCEEEESSGGGTTTTCSEEEECCTTEEEETTTCSEEECCCCGG
T ss_pred             hCCccEEEEEEECCCCEEEEEECCCCCCCeEEEEecCCEEEEeechHHHHhhcCCEEEECCCeEEEEcCCcEEEeecCCc
Confidence            58999999999998899999999999999999984467899999999999999999999999999887777889999876


Q ss_pred             CCC-CCCCCCCcHHHHHHHHHHHHHHhhhcCCCeEEeccCcccHHHHHHHHHHHhchhhh----hhhcCCcccceeccCC
Q 012824           81 YSE-QIPSNPYDPLVLRKAFEKAVVKRLMTDVPFGVLLSGGLDSSLVAAVASRYLADSEA----ACQWGSQLHSFCIGLE  155 (456)
Q Consensus        81 ~~~-~~~~~~~~~~~lr~~L~~AV~~rl~sd~~vgv~LSGGlDSs~Iaala~~~~~~~~~----~~~~~~~l~tfsig~~  155 (456)
                      ... ..++.++.+++|+++|.+||++|+++|+|+|++||||+|||+|++++++...+...    +..|..+++|||++++
T Consensus       196 ~~~~~~~~~~~~~~~lr~~L~~aV~~rl~sdvpvgv~LSGGlDSS~iaala~~~~~~~~~~~~~~~a~~~~l~tfsig~~  275 (553)
T 1ct9_A          196 FDYDAVKDNVTDKNELRQALEDSVKSHLMSDVPYGVLLSGGLDSSIISAITKKYAARRVEDQERSEAWWPQLHSFAVGLP  275 (553)
T ss_dssp             GSHHHHTTCCCCHHHHHHHHHHHHHHHTCCSSCEEEECCSSHHHHHHHHHHHHHC----------------CEEEEEEST
T ss_pred             cccccCCCHHHHHHHHHHHHHHHHHHHhcCCCceEEeCCCCccHHHHHHHHHHhhccccccccccccccCceeEEEecCC
Confidence            531 23355778999999999999999999999999999999999999999987642100    0001124899999999


Q ss_pred             CCchHHHHHHHHHHhCCCceEEEeChhhHHHHHHHHHHhhccCCcccccchHHHHHHHHHHHhCCCcEEEEcCchhhhcc
Q 012824          156 GSPDLKAAREVADYLGTRHHEFHFTVQEGIDALEEVIYHIETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFG  235 (456)
Q Consensus       156 ~~~e~~~A~~vA~~lg~~h~~~~~~~~~~~~~l~~~i~~~e~~~~~~i~~~~~~~~l~~~a~~~g~~vvLsG~GgDElfg  235 (456)
                      +++|..+|+++|+++|++||++.++.+++++.++++++++++++.+++++++++|++++.+++.|++|+|||+||||+||
T Consensus       276 ~~~E~~~A~~vA~~lg~~h~~i~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~~g~~vvLsG~GaDElfg  355 (553)
T 1ct9_A          276 GSPDLKAAQEVANHLGTVHHEIHFTVQEGLDAIRDVIYHIETYDVTTIRASTPMYLMSRKIKAMGIKMVLSGEGSDEVFG  355 (553)
T ss_dssp             TCHHHHHHHHHHHHHTCEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTCCEEECCTTHHHHHT
T ss_pred             CCcHHHHHHHHHHHhCCCCEEEECCHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHHHHHHHcCCeEEEECCCchhccc
Confidence            88999999999999999999999999999999999999999887767777789999999999999999999999999999


Q ss_pred             CCccccCCCChHHHHHHHHHHHHhchhhhhhhhccccccCCceecCCCCCHHHHHHHhcCCccccccCCCCCCcchHHHH
Q 012824          236 GYLYFHKAPNKEEFHQETCRKIKALHLYDCLRANKSTSAWGVEARVPFLDKEFINTAMSIDPEWKMVRPDLGRIEKWILR  315 (456)
Q Consensus       236 Gy~~~~~~p~~~~~~~e~~~~~~~l~~~dllr~dr~~~a~gle~r~PflD~~lve~a~slP~~~k~~~~~~~~~~K~lLR  315 (456)
                      ||.+|+..|....|.+++.+++.+++.+|++|.||++|++|+|+|+||||++|||||++||+++|+.++  ++.+|+|||
T Consensus       356 GY~~~~~~~~~~~~~~e~~~~l~~l~~~~l~r~Dr~~ma~glE~R~PfLD~~lve~a~~lP~~~k~~~~--g~~~K~iLR  433 (553)
T 1ct9_A          356 GYLYFHKAPNAKELHEETVRKLLALHMYDCARANKAMSAWGVEARVPFLDKKFLDVAMRINPQDKMCGN--GKMEKHILR  433 (553)
T ss_dssp             CSGGGGGCCSHHHHHHHHHHHHHHGGGTHHHHHHHHHHTTTCEEECGGGCHHHHHHHHHSCGGGTCC-----CCTTHHHH
T ss_pred             CcHhHhhCcchhhHHHHHHHHHHHHhhhcchhhhhHHhhcCceeECCcCCHHHHHHHhcCCHHHhccCC--CCcchHHHH
Confidence            999999999888899999899999999999999999999999999999999999999999999999752  247899999


Q ss_pred             HhcccCCCCCCChhhhhccccCCCCCCchhhhHHHHHHHHHhcChHHHhcCCCCCCCCCCchhhHhHHHHHHHHHCCCcc
Q 012824          316 NAFDDDKQPYLPKHILYRQKEQFSDGVGYSWIDGLRDHANKQVTDAMLANSSFVYPENTPTTKEAYYYRTIFEKFFPKNA  395 (456)
Q Consensus       316 ~a~~~~~~~~LP~~i~~R~K~~f~~~~~~~w~~~l~~~~~~~l~d~~l~~~~~~~~~~~p~~ke~~~~~~~~~~~~~~~~  395 (456)
                      +||++    +||++|+||+|+||+.|++++|++.++++++++++|+.+++++..++.++|.|||+||||+||++|||+++
T Consensus       434 ~a~~~----~LP~~i~~R~K~~f~~p~~~~w~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~e~~~~~~~f~~~~~~~~  509 (553)
T 1ct9_A          434 ECFEA----YLPASVAWRQKEQFSDGVGYSWIDTLKEVAAQQVSDQQLETARFRFPYNTPTSKEAYLYREIFEELFPLPS  509 (553)
T ss_dssp             HHHGG----GSCHHHHTCCCCTTCCTTCHHHHHHHHHHHHHHSCHHHHHTHHHHCCSSCCCSHHHHHHHHHHHHHCCCHH
T ss_pred             HHHHh----hCCHHHHcCCCcCCCCCccHhHHHHHHHHHHHHhChHHHHhhhhhcCCCCCCchhHHHHHHHHHHHCCcHH
Confidence            99999    99999999999999999998899889999999999999999998889999999999999999999999999


Q ss_pred             ccccccCCcccccchhhhhhhhhhhcCCCCCCchhhhHHhHHhh
Q 012824          396 ARATVPGGPSVACSTAKAVEWDAAWSKNPDPSGRAALGVHAAAY  439 (456)
Q Consensus       396 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~r~~~~~~~~~~  439 (456)
                      +..++|.+++|+||++++..|+++|.++.|||||++ ++|.+++
T Consensus       510 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~d~s~r~~-~~~~~~~  552 (553)
T 1ct9_A          510 AAECVPGGPSVACSSAKAIEWDEAFKKMDDPSGRAV-GVHQSAY  552 (553)
T ss_dssp             HHHHSCC-------------------------------------
T ss_pred             HHhhCCCCCCcccccHHHhhhhhhhCcCCCCcchhh-hhhhccC
Confidence            999999999999999999999999999999999976 9998876

PyMOL of 1ct9

>1jgt_A Beta-lactam synthetase; asparagine synthetase, clavulanic AC AMPCPP, CEA, carboxyethylarginine, hydrolase; HET: APC CMA; 1.95A {Streptomyces clavuligerus} SCOP: c.26.2.1 d.153.1.1 PDB: 1m1z_A 1mb9_A* 1mbz_A* 1mc1_A*	Back alignment and structure

>1q15_A CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, B-lactam synthetase, AS-B, class B asparagine synthetase, AMP-CPP; 2.30A {Pectobacterium carotovorum} SCOP: c.26.2.1 d.153.1.1 PDB: 1q19_A*	Back alignment and structure

>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*	Back alignment and structure

>1xff_A D-fructose-6-, glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; complex (transferase/inhibitor), glutamine amidotransferase; HET: GLU; 1.80A {Escherichia coli} SCOP: d.153.1.1 PDB: 1xfg_A*	Back alignment and structure

>2e18_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, NPPSFA, national project on Pro structural and functional analyses; 2.10A {Pyrococcus horikoshii}	Back alignment and structure

>1kqp_A NAD+ synthase, NH(3)-dependent NAD(+) synthetase, SPOR; ligase, amidotransferase, ATP pyrophosphatase, NAD-adenylate; HET: ADJ; 1.03A {Bacillus subtilis} SCOP: c.26.2.1 PDB: 1fyd_A* 1ifx_A* 1ee1_A* 1ih8_A* 1nsy_A* 2nsy_A* 2pzb_A 2pza_A* 2pz8_A	Back alignment and structure

>3bl5_A Queuosine biosynthesis protein QUEC; PREQ1 biosynthesis, RNA modification, tRNA, hydrolase; 2.95A {Bacillus subtilis}	Back alignment and structure

>1xng_A NH(3)-dependent NAD(+) synthetase; amidotransferase, ligase; HET: DND ATP; 1.70A {Helicobacter pylori} SCOP: c.26.2.1 PDB: 1xnh_A	Back alignment and structure

>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}	Back alignment and structure

>3sdb_A Glutamine-dependent NAD(+) synthetase; glutamine-amidotransferase, glutaminase, glutamine-dependent synthetase, ligase; 2.00A {Mycobacterium tuberculosis} PDB: 3seq_A* 3sez_A* 3szg_A* 3dla_A* 3syt_A*	Back alignment and structure

>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*	Back alignment and structure

>3k32_A Uncharacterized protein MJ0690; predicted subunit of tRNA methyltransferase, methanocaldococcus jannaschii DSM , PSI- 2; 2.50A {Methanocaldococcus jannaschii}	Back alignment and structure

>3fiu_A NH(3)-dependent NAD(+) synthetase; rossman fold, adenine nucleotide alpha hydrolase-like, ATP- binding, ligase, nucleotide-binding; HET: AMP; 1.85A {Francisella tularensis subsp}	Back alignment and structure

>2bpl_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; amidotransferase, ammonia channeling, glucosamine 6- phosphate synthase; HET: F6R; 2.05A {Escherichia coli} SCOP: c.80.1.1 d.153.1.1 PDB: 1jxa_A* 2j6h_A* 2vf4_X 2vf5_X* 3ooj_A*	Back alignment and structure

>1wxi_A NH(3)-dependent NAD(+) synthetase; NADE, E.coli, ligase; HET: AMP; 1.70A {Escherichia coli} SCOP: c.26.2.1 PDB: 1wxf_A 1wxg_A* 1wxh_A* 1wxe_A* 3hmq_A*	Back alignment and structure

>3p52_A NH(3)-dependent NAD(+) synthetase; structural genomics, center for structural genomics of infec diseases, NADE, CSGI; 2.74A {Campylobacter jejuni} SCOP: c.26.2.0	Back alignment and structure

>2pg3_A Queuosine biosynthesis protein QUEC; YP_049261.1, hypothetical protein, structural genomics, JOIN for structural genomics; 2.40A {Pectobacterium atrosepticum SCRI1043} SCOP: c.26.2.1	Back alignment and structure

>2dpl_A GMP synthetase, GMP synthase [glutamine-hydrolyzing] subunit B; pyrococcus horikoshii OT3, structural genomics, NPPSFA; 1.43A {Pyrococcus horikoshii} PDB: 2z0c_A 3a4i_A	Back alignment and structure

>2nz2_A Argininosuccinate synthase; amino-acid biosynthesis, aspartate, citrulline, ST genomics, structural genomics consortium, SGC, ligase; HET: CIR; 2.40A {Homo sapiens}	Back alignment and structure

>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A*	Back alignment and structure

>2hma_A Probable tRNA (5-methylaminomethyl-2-thiouridylat methyltransferase; alpha-beta, beta barrel, structural genomics, PSI-2; HET: MSE SAM; 2.41A {Streptococcus pneumoniae}	Back alignment and structure

>1vl2_A Argininosuccinate synthase; TM1780, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics, ligase; 1.65A {Thermotoga maritima} SCOP: c.26.2.1 d.210.1.1	Back alignment and structure

>1kor_A Argininosuccinate synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: ANP ARG; 1.95A {Thermus thermophilus} SCOP: c.26.2.1 d.210.1.1 PDB: 1j1z_A* 1j21_A* 1kh1_A 1kh2_A* 1kh3_A* 1j20_A*	Back alignment and structure

>3mdn_A Glutamine aminotransferase class-II domain protei; structural genomics, PSI-2, protein structure initiative; 2.09A {Ruegeria pomeroyi}	Back alignment and structure

>2der_A TRNA-specific 2-thiouridylase MNMA; protein-RNA complex, transferase/RNA complex; 3.10A {Escherichia coli} PDB: 2det_A 2deu_A*	Back alignment and structure

>3q4g_A NH(3)-dependent NAD(+) synthetase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 2.40A {Vibrio cholerae} SCOP: c.26.2.0	Back alignment and structure

>1k92_A Argininosuccinate synthase, argininosuccinate SY; N-type ATP pyrophosphatase, ligase; 1.60A {Escherichia coli} SCOP: c.26.2.1 d.210.1.1 PDB: 1k97_A* 1kp2_A* 1kp3_A*	Back alignment and structure

>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}	Back alignment and structure

>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1	Back alignment and structure

>3a2k_A TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, ligase/RNA complex; 3.65A {Geobacillus kaustophilus}	Back alignment and structure

>3dpi_A NAD+ synthetase; ssgcid, decode, structural genomics, PSI, protein structure initiative; 2.20A {Burkholderia pseudomallei} SCOP: c.26.2.0	Back alignment and structure

>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406}	Back alignment and structure

>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*	Back alignment and structure

>1sur_A PAPS reductase; assimilatory sulfate reduction, 3-phospho-adenylyl-sulfate reductase, oxidoreductase; 2.00A {Escherichia coli} SCOP: c.26.2.2	Back alignment and structure

>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ligase; 1.75A {Burkholderia thailandensis}	Back alignment and structure

>2c5s_A THII, probable thiamine biosynthesis protein THII; RNA-binding protein, RNA binding protein, tRNA modification, 4-thiouridine synthase; HET: AMP; 2.5A {Bacillus anthracis} SCOP: c.26.2.6 d.308.1.1	Back alignment and structure

>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}	Back alignment and structure

>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}	Back alignment and structure

>1ni5_A Putative cell cycle protein MESJ; structural genomics, ATPase, PP-type, putative cell cycle PR PSI, protein structure initiative; 2.65A {Escherichia coli} SCOP: b.153.1.2 c.26.2.5 d.229.1.1	Back alignment and structure

>2o8v_A Phosphoadenosine phosphosulfate reductase; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}	Back alignment and structure

>1zun_A Sulfate adenylyltransferase subunit 2; beta barrel, switch domain, heterodimer, pyrophosphate, G protein; HET: GDP AGS; 2.70A {Pseudomonas syringae} SCOP: c.26.2.2	Back alignment and structure

>2oq2_A Phosphoadenosine phosphosulfate reductase; sulfate reduction, PAPS reductase, oxidoreductase; HET: A3P; 2.10A {Saccharomyces cerevisiae}	Back alignment and structure

>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A	Back alignment and structure

>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*	Back alignment and structure

>1vbk_A Hypothetical protein PH1313; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Pyrococcus horikoshii} SCOP: c.26.2.6 d.308.1.1	Back alignment and structure

>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*	Back alignment and structure

>1te5_A Conserved hypothetical protein; glutamine amidotransferase, amidotransferase, structural genomics, PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa PAO1} SCOP: d.153.1.1	Back alignment and structure

>2wsi_A FAD synthetase; transferase, nucleotidyltransferase, nucleotide-binding; HET: FAD; 1.90A {Saccharomyces cerevisiae}	Back alignment and structure

>2goy_A Adenosine phosphosulfate reductase; iron sulfur cluster, nucleotide binding, thiosulfonate intermediate, oxidoreductase; HET: ADX; 2.70A {Pseudomonas aeruginosa}	Back alignment and structure

>3fwk_A FMN adenylyltransferase; FAD biosynthesis, alpha/beta protein, rossmann- like fold, APO-form, extended loop region; HET: BGC; 1.20A {Candida glabrata} PDB: 3g59_A* 3g5a_A* 3g6k_A*	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		456
d1ct9a1		324	c.26.2.1 (A:193-516) Asparagine synthetase B, C-te	8e-86
d1q15a1		296	c.26.2.1 (A:206-501) beta-Lactam synthetase {Pecto	8e-54
d1jgta1		299	c.26.2.1 (A:210-508) beta-Lactam synthetase {Strep	3e-52
d1ct9a2		192	d.153.1.1 (A:1-192) Asparagine synthetase B, N-ter	2e-16
d1xffa_		238	d.153.1.1 (A:) Glucosamine 6-phosphate synthase, N	1e-05
d1q15a2		204	d.153.1.1 (A:2-205) beta-Lactam synthetase {Pectob	5e-05
d1gph12		234	d.153.1.1 (1:1-234) Glutamine PRPP amidotransferas	7e-04

>d1ct9a1 c.26.2.1 (A:193-516) Asparagine synthetase B, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 324	Back information, alignment and structure


class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: N-type ATP pyrophosphatases
domain: Asparagine synthetase B, C-terminal domain
species: Escherichia coli [TaxId: 562]

 Score =  264 bits (674), Expect = 8e-86
 Identities = 202/334 (60%), Positives = 253/334 (75%), Gaps = 14/334 (4%)

Query: 73  RRWYNPPCYSEQIPSNPYDPLVLRKAFEKAVVKRLMTDVPFGVLLSGGLDSSLVAAVASR 132
           R W++     + +  N  D   LR+A E +V   LM+DVP+GVLLSGGLDSS+++A+  +
Sbjct: 1   RDWFDY----DAVKDNVTDKNELRQALEDSVKSHLMSDVPYGVLLSGGLDSSIISAITKK 56

Query: 133 YLA----DSEAACQWGSQLHSFCIGLEGSPDLKAAREVADYLGTRHHEFHFTVQEGIDAL 188
           Y A    D E +  W  QLHSF +GL GSPDLKAA+EVA++LGT HHE HFTVQEG+DA+
Sbjct: 57  YAARRVEDQERSEAWWPQLHSFAVGLPGSPDLKAAQEVANHLGTVHHEIHFTVQEGLDAI 116

Query: 189 EEVIYHIETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEE 248
            +VIYHIETYDVTTIRASTPM+LMSRKIK++G+KMV+SGEGSDE+FGGYLYFHKAPN +E
Sbjct: 117 RDVIYHIETYDVTTIRASTPMYLMSRKIKAMGIKMVLSGEGSDEVFGGYLYFHKAPNAKE 176

Query: 249 FHQETCRKIKALHLYDCLRANKSTSAWGVEARVPFLDKEFINTAMSIDPEWKMVRPDLGR 308
            H+ET RK+ ALH+YDC RANK+ SAWGVEARVPFLDK+F++ AM I+P+ KM      +
Sbjct: 177 LHEETVRKLLALHMYDCARANKAMSAWGVEARVPFLDKKFLDVAMRINPQDKMCGNG--K 234

Query: 309 IEKWILRNAFDDDKQPYLPKHILYRQKEQFSDGVGYSWIDGLRDHANKQVTDAMLANSSF 368
           +EK ILR  F    + YLP  + +RQKEQFSDGVGYSWID L++ A +QV+D  L  + F
Sbjct: 235 MEKHILRECF----EAYLPASVAWRQKEQFSDGVGYSWIDTLKEVAAQQVSDQQLETARF 290

Query: 369 VYPENTPTTKEAYYYRTIFEKFFPKNAARATVPG 402
            +P NTPT+KEAY YR IFE+ FP  +A   VPG
Sbjct: 291 RFPYNTPTSKEAYLYREIFEELFPLPSAAECVPG 324

PyMOL of d1ct9a1

>d1q15a1 c.26.2.1 (A:206-501) beta-Lactam synthetase {Pectobacterium carotovorum [TaxId: 554]} Length = 296	Back information, alignment and structure

>d1jgta1 c.26.2.1 (A:210-508) beta-Lactam synthetase {Streptomyces clavuligerus [TaxId: 1901]} Length = 299	Back information, alignment and structure

>d1ct9a2 d.153.1.1 (A:1-192) Asparagine synthetase B, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 192	Back information, alignment and structure

>d1xffa_ d.153.1.1 (A:) Glucosamine 6-phosphate synthase, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 238	Back information, alignment and structure

>d1q15a2 d.153.1.1 (A:2-205) beta-Lactam synthetase {Pectobacterium carotovorum [TaxId: 554]} Length = 204	Back information, alignment and structure

>d1gph12 d.153.1.1 (1:1-234) Glutamine PRPP amidotransferase, N-terminal domain {Bacillus subtilis [TaxId: 1423]} Length = 234	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		456
d1ct9a1		324	Asparagine synthetase B, C-terminal domain {Escher	100.0
d1jgta1		299	beta-Lactam synthetase {Streptomyces clavuligerus	100.0
d1q15a1		296	beta-Lactam synthetase {Pectobacterium carotovorum	100.0
d1ct9a2		192	Asparagine synthetase B, N-terminal domain {Escher	99.81
d1jgta2		206	beta-Lactam synthetase {Streptomyces clavuligerus	99.68
d1q15a2		204	beta-Lactam synthetase {Pectobacterium carotovorum	99.44
d1gph12		234	Glutamine PRPP amidotransferase, N-terminal domain	99.16
d1xnga1		255	NH3-dependent NAD+-synthetase {Helicobacter pylori	98.64
d1ecfa2		249	Glutamine PRPP amidotransferase, N-terminal domain	98.47
d1xffa_		238	Glucosamine 6-phosphate synthase, N-terminal domai	98.41
d2c5sa1		218	Thiamine biosynthesis protein ThiI, C-terminal dom	98.35
d1kqpa_		271	NH3-dependent NAD+-synthetase {Bacillus subtilis [	98.28
d1wy5a1		216	TilS-like protein Aq_1887 {Aquifex aeolicus [TaxId	98.1
d1wxia1		274	NH3-dependent NAD+-synthetase {Escherichia coli [T	98.08
d1gpma1		197	GMP synthetase, central domain {Escherichia coli [	98.07
d1ni5a1		227	tRNA-Ile-lysidine synthetase, TilS, N-terminal dom	98.0
d1j20a1		165	Argininosuccinate synthetase, N-terminal domain {T	97.76
d1k92a1		188	Argininosuccinate synthetase, N-terminal domain {E	97.6
d1vl2a1		168	Argininosuccinate synthetase, N-terminal domain {T	97.53
d2pg3a1		230	Queuosine biosynthesis protein QueC {Erwinia carot	97.46
d1zuna1		211	Sulfate adenylyltransferase subunit 2, CysD {Pseud	97.09
d1ofda3		430	Alpha subunit of glutamate synthase, N-terminal do	96.52
d1sura_		215	Phosphoadenylyl sulphate (PAPS) reductase {Escheri	96.14
d1ea0a3		422	Alpha subunit of glutamate synthase, N-terminal do	95.51
d1vbka1		132	Hypothetical protein PH1313, C-terminal domain {Ar	93.96
d2d13a1		226	Hypothetical protein PH1257 {Archaeon Pyrococcus h	93.24
d1te5a_		253	Hypothetical protein YafJ (PA1307) {Pseudomonas ae	82.03

>d1ct9a1 c.26.2.1 (A:193-516) Asparagine synthetase B, C-terminal domain {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: N-type ATP pyrophosphatases
domain: Asparagine synthetase B, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.1e-60  Score=476.37  Aligned_cols=309  Identities=64%  Similarity=1.066  Sum_probs=273.0

Q ss_pred             CCCCcHHHHHHHHHHHHHHhhhcCCCeEEeccCcccHHHHHHHHHHHhchhhh----hhhcCCcccceeccCCCCchHHH
Q 012824           87 SNPYDPLVLRKAFEKAVVKRLMTDVPFGVLLSGGLDSSLVAAVASRYLADSEA----ACQWGSQLHSFCIGLEGSPDLKA  162 (456)
Q Consensus        87 ~~~~~~~~lr~~L~~AV~~rl~sd~~vgv~LSGGlDSs~Iaala~~~~~~~~~----~~~~~~~l~tfsig~~~~~e~~~  162 (456)
                      +.....++|+++|++||++||++|+|||++||||||||+|++++++...+...    .......+.+|++++++++|..+
T Consensus        11 ~~~~~~eel~~~l~~sV~~rl~sDvpig~~LSGGlDSs~Iaal~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~e~~~   90 (324)
T d1ct9a1          11 DNVTDKNELRQALEDSVKSHLMSDVPYGVLLSGGLDSSIISAITKKYAARRVEDQERSEAWWPQLHSFAVGLPGSPDLKA   90 (324)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHTCCSSCEEEECCSSHHHHHHHHHHHHHC----------------CEEEEEESTTCHHHHH
T ss_pred             CchhhHHHHHHHHHHHHHHHhccCCcEEEEecchHHHHHHHHHHHHHHhhcccccccccccCCCcccceeccCCCchHHH
Confidence            44556899999999999999999999999999999999999999987543210    00122457899999999999999


Q ss_pred             HHHHHHHhCCCceEEEeChhhHHHHHHHHHHhhccCCcccccchHHHHHHHHHHHhCCCcEEEEcCchhhhccCCccccC
Q 012824          163 AREVADYLGTRHHEFHFTVQEGIDALEEVIYHIETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYFHK  242 (456)
Q Consensus       163 A~~vA~~lg~~h~~~~~~~~~~~~~l~~~i~~~e~~~~~~i~~~~~~~~l~~~a~~~g~~vvLsG~GgDElfgGy~~~~~  242 (456)
                      |+++|+++|+.|+++.++.++..+.++++++++|.++.+.....++.|.+++.+++.|++|+|||+||||+||||.+|+.
T Consensus        91 a~~~a~~~~~~~~~v~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~l~~~a~~~~~kV~LsG~GaDElfgGY~~~~~  170 (324)
T d1ct9a1          91 AQEVANHLGTVHHEIHFTVQEGLDAIRDVIYHIETYDVTTIRASTPMYLMSRKIKAMGIKMVLSGEGSDEVFGGYLYFHK  170 (324)
T ss_dssp             HHHHHHHHTCEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTCCEEECCTTHHHHHTCSGGGGG
T ss_pred             HHHHHhhccccceEEEEecchHHHHHHHHHHHHhhcCCcccccccHHHHHHHHHhcCCCeEeeccccchhhhhcchhhhc
Confidence            99999999999999999999999999999999987776555566788899999999999999999999999999999988


Q ss_pred             CCChHHHHHHHHHHHHhchhhhhhhhccccccCCceecCCCCCHHHHHHHhcCCccccccCCCCCCcchHHHHHhcccCC
Q 012824          243 APNKEEFHQETCRKIKALHLYDCLRANKSTSAWGVEARVPFLDKEFINTAMSIDPEWKMVRPDLGRIEKWILRNAFDDDK  322 (456)
Q Consensus       243 ~p~~~~~~~e~~~~~~~l~~~dllr~dr~~~a~gle~r~PflD~~lve~a~slP~~~k~~~~~~~~~~K~lLR~a~~~~~  322 (456)
                      ......+++........++.+.+.|.||++|++|+|.|+||||++||||+++||+++|+..+  +..+|+|||++|++  
T Consensus       171 ~~~~~~~~~~~~~~~~~l~~~~l~~~dr~~m~~g~E~R~PfLD~~lve~~~~lp~~~k~~~~--~~~~K~iLR~a~~~--  246 (324)
T d1ct9a1         171 APNAKELHEETVRKLLALHMYDCARANKAMSAWGVEARVPFLDKKFLDVAMRINPQDKMCGN--GKMEKHILRECFEA--  246 (324)
T ss_dssp             CCSHHHHHHHHHHHHHHGGGTHHHHHHHHHHTTTCEEECGGGCHHHHHHHHHSCGGGTCC-----CCTTHHHHHHHGG--
T ss_pred             ccchHHHhhhhhhHHHHhhhhhhHHHHHHHHhcCccccHHHhhHHHHHHHHhCCHHHhcchh--hhhhHHHHHHHHHh--
Confidence            77777787777777788888899999999999999999999999999999999999998642  35789999999999  


Q ss_pred             CCCCChhhhhccccCCCCCCchhhhHHHHHHHHHhcChHHHhcCCCCCCCCCCchhhHhHHHHHHHHHCCCcccccccc
Q 012824          323 QPYLPKHILYRQKEQFSDGVGYSWIDGLRDHANKQVTDAMLANSSFVYPENTPTTKEAYYYRTIFEKFFPKNAARATVP  401 (456)
Q Consensus       323 ~~~LP~~i~~R~K~~f~~~~~~~w~~~l~~~~~~~l~d~~l~~~~~~~~~~~p~~ke~~~~~~~~~~~~~~~~~~~~~~  401 (456)
                        +||++|++|+|+||..|++.+|.+.+++++++.++++.+......++.++|.|||+++||+||++|||+++++.|+|
T Consensus       247 --~lP~~i~~r~K~~f~~~~~~~~~~~l~~~~~~~ls~~~l~~~~~~~~~~~~~~ke~~~~r~if~~~~p~~~~~~~~~  323 (324)
T d1ct9a1         247 --YLPASVAWRQKEQFSDGVGYSWIDTLKEVAAQQVSDQQLETARFRFPYNTPTSKEAYLYREIFEELFPLPSAAECVP  323 (324)
T ss_dssp             --GSCHHHHTCCCCTTCCTTCHHHHHHHHHHHHHHSCHHHHHTHHHHCCSSCCCSHHHHHHHHHHHHHCCCHHHHHHSC
T ss_pred             --cchhhhhcccccCCCCCcchHHHHHHHHHHHHHcCHHHHHHhHhhCCCCCCCcHHHHHHHHHHHHHCCCCcHHhcCC
Confidence              99999999999999999998888999999999999999999888889999999999999999999999998888887

PyMOL of d1ct9a1

>d1jgta1 c.26.2.1 (A:210-508) beta-Lactam synthetase {Streptomyces clavuligerus [TaxId: 1901]}	Back information, alignment and structure

>d1q15a1 c.26.2.1 (A:206-501) beta-Lactam synthetase {Pectobacterium carotovorum [TaxId: 554]}	Back information, alignment and structure

>d1ct9a2 d.153.1.1 (A:1-192) Asparagine synthetase B, N-terminal domain {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1jgta2 d.153.1.1 (A:4-209) beta-Lactam synthetase {Streptomyces clavuligerus [TaxId: 1901]}	Back information, alignment and structure

>d1q15a2 d.153.1.1 (A:2-205) beta-Lactam synthetase {Pectobacterium carotovorum [TaxId: 554]}	Back information, alignment and structure

>d1gph12 d.153.1.1 (1:1-234) Glutamine PRPP amidotransferase, N-terminal domain {Bacillus subtilis [TaxId: 1423]}	Back information, alignment and structure

>d1xnga1 c.26.2.1 (A:3-257) NH3-dependent NAD+-synthetase {Helicobacter pylori [TaxId: 210]}	Back information, alignment and structure

>d1ecfa2 d.153.1.1 (A:1-249) Glutamine PRPP amidotransferase, N-terminal domain {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1xffa_ d.153.1.1 (A:) Glucosamine 6-phosphate synthase, N-terminal domain {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d2c5sa1 c.26.2.6 (A:174-391) Thiamine biosynthesis protein ThiI, C-terminal domain {Bacillus anthracis [TaxId: 1392]}	Back information, alignment and structure

>d1kqpa_ c.26.2.1 (A:) NH3-dependent NAD+-synthetase {Bacillus subtilis [TaxId: 1423]}	Back information, alignment and structure

>d1wy5a1 c.26.2.5 (A:1-216) TilS-like protein Aq_1887 {Aquifex aeolicus [TaxId: 63363]}	Back information, alignment and structure

>d1wxia1 c.26.2.1 (A:2-275) NH3-dependent NAD+-synthetase {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1gpma1 c.26.2.1 (A:208-404) GMP synthetase, central domain {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1ni5a1 c.26.2.5 (A:0-226) tRNA-Ile-lysidine synthetase, TilS, N-terminal domain {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1j20a1 c.26.2.1 (A:1-165) Argininosuccinate synthetase, N-terminal domain {Thermus thermophilus [TaxId: 274]}	Back information, alignment and structure

>d1k92a1 c.26.2.1 (A:1-188) Argininosuccinate synthetase, N-terminal domain {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1vl2a1 c.26.2.1 (A:2-169) Argininosuccinate synthetase, N-terminal domain {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d2pg3a1 c.26.2.1 (A:1-230) Queuosine biosynthesis protein QueC {Erwinia carotovora [TaxId: 554]}	Back information, alignment and structure

>d1zuna1 c.26.2.2 (A:1-211) Sulfate adenylyltransferase subunit 2, CysD {Pseudomonas syringae pv. tomato [TaxId: 323]}	Back information, alignment and structure

>d1ofda3 d.153.1.1 (A:1-430) Alpha subunit of glutamate synthase, N-terminal domain {Synechocystis sp. [TaxId: 1143]}	Back information, alignment and structure

>d1sura_ c.26.2.2 (A:) Phosphoadenylyl sulphate (PAPS) reductase {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1ea0a3 d.153.1.1 (A:1-422) Alpha subunit of glutamate synthase, N-terminal domain {Azospirillum brasilense [TaxId: 192]}	Back information, alignment and structure

>d1vbka1 c.26.2.6 (A:176-307) Hypothetical protein PH1313, C-terminal domain {Archaeon Pyrococcus horikoshii [TaxId: 53953]}	Back information, alignment and structure

>d2d13a1 c.26.2.1 (A:2-227) Hypothetical protein PH1257 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}	Back information, alignment and structure

>d1te5a_ d.153.1.1 (A:) Hypothetical protein YafJ (PA1307) {Pseudomonas aeruginosa [TaxId: 287]}	Back information, alignment and structure