Citrus Sinensis ID: 012852
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 455 | 2.2.26 [Sep-21-2011] | |||||||
| Q42656 | 378 | Alpha-galactosidase OS=Co | N/A | no | 0.789 | 0.949 | 0.664 | 1e-141 | |
| P14749 | 411 | Alpha-galactosidase OS=Cy | N/A | no | 0.791 | 0.875 | 0.640 | 1e-140 | |
| Q9FXT4 | 417 | Alpha-galactosidase OS=Or | no | no | 0.791 | 0.863 | 0.647 | 1e-137 | |
| Q55B10 | 385 | Probable alpha-galactosid | yes | no | 0.791 | 0.935 | 0.485 | 2e-95 | |
| B3PGJ1 | 404 | Alpha-galactosidase A OS= | yes | no | 0.780 | 0.878 | 0.459 | 3e-86 | |
| Q9UVD6 | 474 | Alpha-galactosidase OS=To | yes | no | 0.751 | 0.721 | 0.432 | 2e-76 | |
| Q9P4V4 | 470 | Alpha-galactosidase OS=Zy | N/A | no | 0.767 | 0.742 | 0.422 | 7e-76 | |
| Q03647 | 471 | Alpha-galactosidase OS=Sa | N/A | no | 0.738 | 0.713 | 0.431 | 1e-75 | |
| A4DA70 | 648 | Probable alpha-galactosid | yes | no | 0.775 | 0.544 | 0.420 | 8e-75 | |
| B0YEK2 | 648 | Probable alpha-galactosid | N/A | no | 0.775 | 0.544 | 0.420 | 8e-75 |
| >sp|Q42656|AGAL_COFAR Alpha-galactosidase OS=Coffea arabica PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 501 bits (1290), Expect = e-141, Method: Compositional matrix adjust.
Identities = 246/370 (66%), Positives = 280/370 (75%), Gaps = 11/370 (2%)
Query: 83 LNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRD 142
L NGL TP MGWNSWN F CN+ E +I+ETADA+VS GLA LGY ++N+DDCW+ RD
Sbjct: 16 LANGLGLTPPMGWNSWNHFRCNLDEKLIRETADAMVSKGLAALGYKYINLDDCWAELNRD 75
Query: 143 LKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTC-QVRPGSLFHEKDDAPLFA 201
+G LVP TFPSGIKALADYVH KGLKLGIYSDAG TC + PGSL HE+ DA FA
Sbjct: 76 SQGNLVPKGSTFPSGIKALADYVHSKGLKLGIYSDAGTQTCSKTMPGSLGHEEQDAKTFA 135
Query: 202 SWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSW 261
SWGVDYLKYDNC N I PK+RYP M AL +G SIF+SLCEWG +DPA WA +VGNSW
Sbjct: 136 SWGVDYLKYDNCNNNNISPKERYPIMSKALLNSGRSIFFSLCEWGEEDPATWAKEVGNSW 195
Query: 262 RTTGDINDTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALM 321
RTTGDI+D+W+SMTS AD+NDKWASYAGPGGWNDPDMLEVGNGGM+ EYR+HFSIWAL
Sbjct: 196 RTTGDIDDSWSSMTSRADMNDKWASYAGPGGWNDPDMLEVGNGGMTTTEYRSHFSIWALA 255
Query: 322 KAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVYVSGTDNCLQVWVGPLSGH 381
KAPLLIGCD+R+M TF++LSN EVIAVNQD LGVQG KV G L+VW GPLSG
Sbjct: 256 KAPLLIGCDIRSMDGATFQLLSNAEVIAVNQDKLGVQGNKVKTYGD---LEVWAGPLSGK 312
Query: 382 RLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQH---KQVTGDAVSSFGAQVDAH 438
R+ VALWNR TITA W +GL S+ V+ RDLW H K V G A VDAH
Sbjct: 313 RVAVALWNRGSSTATITAYWSDVGLPSTAVVNARDLWAHSTEKSVKG----QISAAVDAH 368
Query: 439 DCQMYIFTPR 448
D +MY+ TP+
Sbjct: 369 DSKMYVLTPQ 378
|
Preferentially cleaves alpha-1,3 and alpha-1,4 glycoside linkages. Involved in the hydrolysis of the galactomannan, it splits alpha-linked galactose moieties. It is particularly suitable for the hydrolysis of guar gum to a gum with improved gelling properties. Can cleave terminal alpha-1,3-linked galactose residues responsible for blood group B specificity from the surface of erythrocytes thereby converting these cells serologically to group O. Coffea arabica (taxid: 13443) EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 2 |
| >sp|P14749|AGAL_CYATE Alpha-galactosidase OS=Cyamopsis tetragonoloba PE=1 SV=1 | Back alignment and function description |
|---|
Score = 498 bits (1282), Expect = e-140, Method: Compositional matrix adjust.
Identities = 235/367 (64%), Positives = 280/367 (76%), Gaps = 7/367 (1%)
Query: 85 NGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLK 144
NGL TP MGWNSWN F C+I+E +++ETADA+VSTGLA LGY ++N+DDCW+ RD +
Sbjct: 50 NGLGQTPPMGWNSWNHFGCDINENVVRETADAMVSTGLAALGYQYINLDDCWAELNRDSE 109
Query: 145 GQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVR-PGSLFHEKDDAPLFASW 203
G +VP+ FPSGIKALADYVH KGLKLG+YSDAG TC R PGSL HE+ DA FASW
Sbjct: 110 GNMVPNAAAFPSGIKALADYVHSKGLKLGVYSDAGNQTCSKRMPGSLGHEEQDAKTFASW 169
Query: 204 GVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSWRT 263
GVDYLKYDNC NLGI K+RYPPM AL +G IF+S+CEWG +DP +WA +GNSWRT
Sbjct: 170 GVDYLKYDNCENLGISVKERYPPMGKALLSSGRPIFFSMCEWGWEDPQIWAKSIGNSWRT 229
Query: 264 TGDINDTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALMKA 323
TGDI D W SMTSIAD NDKWASYAGPGGWNDPDMLEVGNGGM+ +EYR+HFSIWAL KA
Sbjct: 230 TGDIEDNWNSMTSIADSNDKWASYAGPGGWNDPDMLEVGNGGMTTEEYRSHFSIWALAKA 289
Query: 324 PLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVYVSGTDNCLQVWVGPLSGHRL 383
PLL+GCD+R M T E++SN EVIAVNQD LGVQG+KV + N L+VW GPLS +++
Sbjct: 290 PLLVGCDIRAMDDTTHELISNAEVIAVNQDKLGVQGKKVK---STNDLEVWAGPLSDNKV 346
Query: 384 VVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGDAVS-SFGAQVDAHDCQM 442
V LWNR T+TA W +GL+ T V RDLW+H T VS A++D+H C+M
Sbjct: 347 AVILWNRSSSRATVTASWSDIGLQQGTTVDARDLWEHS--TQSLVSGEISAEIDSHACKM 404
Query: 443 YIFTPRT 449
Y+ TPR+
Sbjct: 405 YVLTPRS 411
|
Involved in the hydrolysis of the galactomannan, it splits alpha-linked galactose moieties. It is particularly suitable for the hydrolysis of guar gum to a gum with improved gelling properties. Preferentially cleaves alpha-1,6 glycoside linkages. Cyamopsis tetragonoloba (taxid: 3832) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 2 |
| >sp|Q9FXT4|AGAL_ORYSJ Alpha-galactosidase OS=Oryza sativa subsp. japonica GN=Os10g0493600 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 488 bits (1256), Expect = e-137, Method: Compositional matrix adjust.
Identities = 237/366 (64%), Positives = 271/366 (74%), Gaps = 6/366 (1%)
Query: 83 LNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRD 142
NGL TPQMGWNSWN F C I+E II+ETADALV+TGLA+LGY +VNIDDCW+ RD
Sbjct: 56 FENGLGRTPQMGWNSWNHFYCGINEQIIRETADALVNTGLAKLGYQYVNIDDCWAEYSRD 115
Query: 143 LKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVR-PGSLFHEKDDAPLFA 201
+G VP+ TFPSGIKALADYVH KGLKLGIYSDAG TC + PGSL HE+ D FA
Sbjct: 116 SQGNFVPNRQTFPSGIKALADYVHAKGLKLGIYSDAGSQTCSNKMPGSLDHEEQDVKTFA 175
Query: 202 SWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSW 261
SWGVDYLKYDNC + G +RY M +A+ G +IF+SLCEWG ++PA WAG++GNSW
Sbjct: 176 SWGVDYLKYDNCNDAGRSVMERYTRMSNAMKTYGKNIFFSLCEWGKENPATWAGRMGNSW 235
Query: 262 RTTGDINDTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALM 321
RTTGDI D W SMTS AD ND+WA+YAGPGGWNDPDMLEVGNGGMS EYR+HFSIWAL
Sbjct: 236 RTTGDIADNWGSMTSRADENDQWAAYAGPGGWNDPDMLEVGNGGMSEAEYRSHFSIWALA 295
Query: 322 KAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVYVSGTDNCLQVWVGPLSGH 381
KAPLLIGCDVR+M+ +T ILSN EVIAVNQD LGVQG+KV +DN L+VW GPLS +
Sbjct: 296 KAPLLIGCDVRSMSQQTKNILSNSEVIAVNQDSLGVQGKKVQ---SDNGLEVWAGPLSNN 352
Query: 382 RLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQVDAHDCQ 441
R V LWNR TITA W +GL S V+ RDLW H A A V HDC+
Sbjct: 353 RKAVVLWNRQSYQATITAHWSNIGLAGSVAVTARDLWAHSSFA--AQGQISASVAPHDCK 410
Query: 442 MYIFTP 447
MY+ TP
Sbjct: 411 MYVLTP 416
|
Hydrolyzes melibiose, raffinose and stachyose in the following decreasing order of reactivity: raffinose, melibiose, stachyose. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 2 |
| >sp|Q55B10|AGAL_DICDI Probable alpha-galactosidase OS=Dictyostelium discoideum GN=melA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 349 bits (896), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 179/369 (48%), Positives = 236/369 (63%), Gaps = 9/369 (2%)
Query: 83 LNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRD 142
L+NGLA TPQMGW+SWNF+ACNI+E++I TA A+VS G+A+ GY +VNIDDCW+ R
Sbjct: 20 LDNGLALTPQMGWSSWNFYACNINESVIMNTAKAMVSNGMADAGYTYVNIDDCWAGG-RY 78
Query: 143 LKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEKDDAPLFAS 202
G + D FP+GIK +ADY+H GLK+GIY+DAG TCQ R GS +E +DA +A
Sbjct: 79 PNGTVYADPTNFPNGIKYVADYIHSLGLKIGIYTDAGTETCQKRVGSYGYEANDAQTYAE 138
Query: 203 WGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSWR 262
WG+DY+K D C+ P++RY M ALN TG +F+SLC+WG ++P + VGNSWR
Sbjct: 139 WGIDYVKEDWCYATLENPQQRYQIMSQALNATGRPMFFSLCDWGYENPWTFGMSVGNSWR 198
Query: 263 TTGDINDTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALMK 322
TT DI D W SM S S++G GG+NDPDM+ VGNGGMS EY +HFS+W+L+
Sbjct: 199 TTPDIKDNWDSMLSNLMAQAPITSFSGIGGFNDPDMMMVGNGGMSNTEYVSHFSLWSLLN 258
Query: 323 APLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGR--KVYVSGTDNCLQVWVGPLSG 380
APL+ GCD+ ++ ET IL+ EVIA+NQDPLGVQG K Y G Q+W PLS
Sbjct: 259 APLIAGCDLIDIDQETLSILTASEVIAINQDPLGVQGSLVKSYNGGLQ---QIWAKPLSN 315
Query: 381 HRLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQ--VDAH 438
V L+N TI W + +E S ++S+R+LW + G S+ + + H
Sbjct: 316 GARAVVLFNTDTNPATIELLWGNIWMEPSQQLSIRNLWTQTNL-GTFTESYESDSLIPPH 374
Query: 439 DCQMYIFTP 447
C M TP
Sbjct: 375 GCIMLTLTP 383
|
Dictyostelium discoideum (taxid: 44689) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 2 |
| >sp|B3PGJ1|AGAL_CELJU Alpha-galactosidase A OS=Cellvibrio japonicus (strain Ueda107) GN=agaA PE=1 SV=1 | Back alignment and function description |
|---|
Score = 319 bits (817), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 176/383 (45%), Positives = 225/383 (58%), Gaps = 28/383 (7%)
Query: 87 LASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQ 146
LA TPQMGWNSWN F CN+ E +I+ ADA+V++G+ GY+++NIDDCW RD G
Sbjct: 29 LAKTPQMGWNSWNTFGCNVDEKMIRAMADAMVTSGMKAAGYEYINIDDCWHGE-RDKNGF 87
Query: 147 LVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEKDDAPLFASWGVD 206
+ D FPSG+KALADYVH KGLKLGIYSDAG TC RPGS HE DA +ASWG+D
Sbjct: 88 IQADKKHFPSGMKALADYVHAKGLKLGIYSDAGNTTCAGRPGSRGHEYQDALTYASWGID 147
Query: 207 YLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSWRTTGD 266
Y+KYD C I PK Y MRDA+++ G + +S+CEWG + P WA VG+SWRTTGD
Sbjct: 148 YVKYDWCDTQDINPKSAYATMRDAIHKAGRPMLFSICEWGDNQPWEWAQDVGHSWRTTGD 207
Query: 267 INDTWA--------SMTSIADINDKWA---SYAGPGGWNDPDMLEVGNGGMSYQEYRAHF 315
I W S + I DK A YAGPG WND DM+EVGN GM+ +E RAHF
Sbjct: 208 IYPCWNCEHNHGSWSSFGVLPILDKQAGLRKYAGPGHWNDMDMMEVGN-GMTEEEDRAHF 266
Query: 316 SIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVYVSGTDNCLQVWV 375
S+WA M +PL+ G D+RNM+ T IL++KE IA+NQD LG+Q K G L++++
Sbjct: 267 SLWAFMASPLIAGNDLRNMSDTTRAILTHKETIAINQDKLGIQAMKWIDEGD---LEIYI 323
Query: 376 GPLSGHRLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQV----------TG 425
PL V NR A W ++ +S +++ KQ TG
Sbjct: 324 KPLEKGHYAVLFLNRADDAMDYRFDWSFHYMKDD--ISKHEIFFDKQAFNWRNIWNGETG 381
Query: 426 DAVSSFGAQVDAHDCQMYIFTPR 448
+V AH + +PR
Sbjct: 382 STKEVLNIKVPAHGVVVLRLSPR 404
|
Hydrolyzes galactomannan found in plant cell wall, by cleaving alpha-1,6-D-galactose side-chains from the mannan backbone. Appears to act in synergy with mannanase (ManA) to elicit hydrolysis of galactomannan. Has greater activity against galactomannans with decreased degree of polymerisation values. To a lesser extent, is also able to degrade other galactosides containing alpha-1,6-linked D-galactose, such as melibiose and stachyose. Cellvibrio japonicus (strain Ueda107) (taxid: 498211) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 2 |
| >sp|Q9UVD6|MEL_TORDE Alpha-galactosidase OS=Torulaspora delbrueckii GN=MEL PE=3 SV=1 | Back alignment and function description |
|---|
Score = 286 bits (732), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 166/384 (43%), Positives = 219/384 (57%), Gaps = 42/384 (10%)
Query: 79 GILQLNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSS 138
G+ NGL TPQMGWN+WN FACN+SE ++ T D + + GL ++GY +V +DDCWS
Sbjct: 19 GVSPSYNGLGLTPQMGWNNWNTFACNVSEDLLLSTVDRIAALGLRDIGYHYVILDDCWSD 78
Query: 139 PLRDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEKDDAP 198
RD G LVPD+ FP+G+K +ADY+HGK G+YS AG +TC GSL HE+DDA
Sbjct: 79 G-RDSDGMLVPDSTKFPNGMKHVADYLHGKDFLFGMYSSAGEYTCAGYAGSLDHEEDDAA 137
Query: 199 LFASWGVDYLKYDNCFNLGI--EPK---KRYPPMRDALNETGCSIFYSLCEWGVDDPALW 253
FA VDYLKYDNC+N G P+ RY M +ALN+T IFYSLC WG D W
Sbjct: 138 FFAKNEVDYLKYDNCYNRGQFGTPETSFNRYRAMSEALNKTERPIFYSLCNWGQDLTFYW 197
Query: 254 AGKVGNSWRTTGDINDTW-------------------ASMTSIADINDKWASY---AGPG 291
+ NSWR +GDI + SI +I +K A AG G
Sbjct: 198 GSGIANSWRISGDITAEFDRPDSRCPCDGDEYDCPYAGFHCSIMNILNKAAPMGQNAGVG 257
Query: 292 GWNDPDMLEVGNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVN 351
GWND D LEVG G ++ E +AHFS+WA++K+ ++IG DVRN+ +F I S V+A+N
Sbjct: 258 GWNDLDCLEVGVGNLTDDEEKAHFSMWAIVKSAMVIGADVRNLKPSSFSIYSQASVLAIN 317
Query: 352 QDPLGVQGRKV---YVSGTDNC----LQVWVGPLSGHRLVVALWNRCPKAETITAQWDAL 404
QDP G +V YV TD +Q+W GPL VVAL N K + A + +
Sbjct: 318 QDPAGAPAIRVWRRYVPETDQHGQGEVQLWSGPLDNGDRVVALLNGGAKERPMVAYLEDI 377
Query: 405 GLES-------STKVSVRDLWQHK 421
++S S+ +V DLW ++
Sbjct: 378 FIDSFVGSEELSSTWNVYDLWANR 401
|
Torulaspora delbrueckii (taxid: 4950) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 2 |
| >sp|Q9P4V4|MEL_ZYGMR Alpha-galactosidase OS=Zygosaccharomyces mrakii GN=MEL PE=3 SV=1 | Back alignment and function description |
|---|
Score = 285 bits (728), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 166/393 (42%), Positives = 222/393 (56%), Gaps = 44/393 (11%)
Query: 79 GILQLNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSS 138
G+ NGL TPQMGWN+WN FACN++E ++ TAD + GL ++GY++V +DDCWS
Sbjct: 18 GVSPSYNGLGLTPQMGWNNWNTFACNVTEQLLLGTADRISELGLKDVGYNYVILDDCWSG 77
Query: 139 PLRDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEKDDAP 198
R G LVPD FP G+K +AD++H + L G+YS AG +TC PGSL HE+ DA
Sbjct: 78 G-RSSNGSLVPDLNKFPHGMKYVADHLHDQDLLFGMYSSAGEYTCAGYPGSLGHEEKDAQ 136
Query: 199 LFASWGVDYLKYDNCFNLGI--EPK---KRYPPMRDALNETGCSIFYSLCEWGVDDPALW 253
FA VDYLKYDNC+N G P+ +RY M DALN TG IFYSLC WG D W
Sbjct: 137 FFARNEVDYLKYDNCYNKGQFGTPQASYERYKAMSDALNNTGRPIFYSLCNWGQDLTFYW 196
Query: 254 AGKVGNSWRTTGDINDTWASMTSIADIND-----KWASY-----------------AGPG 291
+ NSWR +GDI + S D K+A Y A PG
Sbjct: 197 GSAIANSWRMSGDITADFDRPDSRCPCGDDEYDCKYAGYHCSIMNILNKAAPMGQNANPG 256
Query: 292 GWNDPDMLEVGNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVN 351
GWND DMLEVG G ++ E +AHFS+WA++++PL+IG DV ++ +F I + VIA+N
Sbjct: 257 GWNDLDMLEVGVGNLTDDEEKAHFSMWAMVRSPLIIGADVNHLKPSSFSIYAQSPVIAIN 316
Query: 352 QDPLGVQGRKVY---VSGTD----NCLQVWVGPLSGHRLVVALWNRCPKAETITAQWDAL 404
QDP GV +V+ VS TD +Q W GPL V+A N + + A D +
Sbjct: 317 QDPRGVPATRVWRRQVSDTDAYGRGEVQFWSGPLENGDQVIAFLNGGNRMRPMNAGLDDI 376
Query: 405 GLES-------STKVSVRDLWQHKQVTGDAVSS 430
+S ++ +V DLW ++ D+V+S
Sbjct: 377 FFDSHPGAPELNSTWAVYDLWANRME--DSVAS 407
|
Zygosaccharomyces mrakii (taxid: 42260) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 2 |
| >sp|Q03647|MEL_SACPS Alpha-galactosidase OS=Saccharomyces pastorianus GN=MEL PE=3 SV=1 | Back alignment and function description |
|---|
Score = 284 bits (726), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 163/378 (43%), Positives = 216/378 (57%), Gaps = 42/378 (11%)
Query: 85 NGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLK 144
NGL TPQMGW++WN FAC++SE ++ +TAD + GL +LGY +V +DDCWSS R
Sbjct: 24 NGLGLTPQMGWDNWNTFACDVSEQLLLDTADRISEIGLKDLGYTYVILDDCWSSG-RTAN 82
Query: 145 GQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEKDDAPLFASWG 204
G LV D FP+G+ +AD++H G+YS AG +TC PGSL HE++DA FAS G
Sbjct: 83 GTLVADKEKFPNGMSHVADHLHNNNFLFGMYSSAGEYTCAGYPGSLGHEEEDAEFFASNG 142
Query: 205 VDYLKYDNCFNLGI--EPK---KRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGN 259
VDYLKYDNC+N G P+ KRY M DALN+TG IFYSLC WG D W + N
Sbjct: 143 VDYLKYDNCYNKGQFGAPETSYKRYKAMSDALNKTGRPIFYSLCNWGQDLTHYWGSDIAN 202
Query: 260 SWRTTGDINDTWAS-------------------MTSIADINDKWASY---AGPGGWNDPD 297
SWR +GDI + SI +I +K A AG GGWND D
Sbjct: 203 SWRMSGDIYPQFTRPDSRCPCDGDQFDCAYAGFHCSIMNILNKAAPMGQNAGIGGWNDLD 262
Query: 298 MLEVGNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGV 357
LEVG G ++ E +AHFS+WA++K+PL+IG DV ++ A ++ I S VIA+NQDP GV
Sbjct: 263 NLEVGVGNLTDDEEKAHFSMWAMVKSPLVIGADVNHLKASSYSIYSQASVIAINQDPKGV 322
Query: 358 QGRKVY---VSGTDNC----LQVWVGPLSGHRLVVALWNRCPKAETITAQWDALGLES-- 408
+V+ V TD +Q W GPL V+AL N K + + + +S
Sbjct: 323 PATRVWRHQVPQTDKYGQGEIQFWSGPLDNGDQVIALLNGGIKPRPMNTNLEEIFFDSYL 382
Query: 409 -----STKVSVRDLWQHK 421
S+ + DLW ++
Sbjct: 383 GFEQLSSNWDIYDLWANR 400
|
Saccharomyces pastorianus (taxid: 27292) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 2 |
| >sp|A4DA70|AGALD_ASPFU Probable alpha-galactosidase D OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=aglD PE=3 SV=2 | Back alignment and function description |
|---|
Score = 281 bits (719), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 158/376 (42%), Positives = 215/376 (57%), Gaps = 23/376 (6%)
Query: 82 QLNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLR 141
+++NGLA TPQMGWNS+N+++C+ +E II+ A ALV GLAELGY +V D WS R
Sbjct: 22 RIDNGLARTPQMGWNSYNYYSCSPNEAIIRSNAKALVDLGLAELGYRYVTTDCGWSVADR 81
Query: 142 DLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRP---GSLFHEKDDAP 198
G L + FPSG A+ +Y+H GL G+Y D+G C P GSL+HE+ DA
Sbjct: 82 LPNGTLTWNETLFPSGFPAMGEYLHELGLLFGVYGDSGTKLCGSPPDQVGSLYHEEQDAK 141
Query: 199 LFASWGVDYLKYDNCF--------NLGIE----PKKRYPPMRDALNETGCSIFYSLCEWG 246
FA WG D LKYDNC+ N+ E P+ RY M AL G I + +CEWG
Sbjct: 142 TFAEWGADSLKYDNCYSDAATNYPNVNYEPSTSPRPRYEIMSSALARVGRPILFQICEWG 201
Query: 247 VDDPALWAGKVGNSWRTTGDINDTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGM 306
+D PALWA +GNSWR DI W S+ + +AGPG W D DML VGNG
Sbjct: 202 IDFPALWAPALGNSWRIGNDIIPAWRSIFRTLNQAVPNTDFAGPGQWADLDMLYVGNGVF 261
Query: 307 SYQEYRAHFSIWALMKAPLLIGCDVRN----MTAETFEILSNKEVIAVNQDPLGVQGRKV 362
S E + HFS+WA++K+PL IG +++ ++ + E+L K+VI NQD LGV +
Sbjct: 262 SLPEEQTHFSLWAILKSPLTIGAALKDDDTSISQASLEVLKQKDVIGFNQDALGVSA-SL 320
Query: 363 YVSGTDNCLQVWVGPLSGHRLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQ 422
+D +VW GPLSG+R VVA+ N ++ +T +GL+ + R++W K
Sbjct: 321 KRRWSDEGYEVWSGPLSGNRTVVAVINWRNESRDLTLDLPDVGLQYAQV--ARNIW-GKT 377
Query: 423 VTGDAVSSFGAQVDAH 438
V D +S+ A V H
Sbjct: 378 VVRDVRTSYTAGVAGH 393
|
Hydrolyzes a variety of simple alpha-D-galactoside as well as more complex molecules such as oligosaccharides and polysaccharides. Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 2 |
| >sp|B0YEK2|AGALD_ASPFC Probable alpha-galactosidase D OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=aglD PE=3 SV=2 | Back alignment and function description |
|---|
Score = 281 bits (719), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 158/376 (42%), Positives = 215/376 (57%), Gaps = 23/376 (6%)
Query: 82 QLNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLR 141
+++NGLA TPQMGWNS+N+++C+ +E II+ A ALV GLAELGY +V D WS R
Sbjct: 22 RIDNGLARTPQMGWNSYNYYSCSPNEAIIRSNAKALVDLGLAELGYRYVTTDCGWSVADR 81
Query: 142 DLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRP---GSLFHEKDDAP 198
G L + FPSG A+ +Y+H GL G+Y D+G C P GSL+HE+ DA
Sbjct: 82 LPNGTLTWNETLFPSGFPAMGEYLHELGLLFGVYGDSGTKLCGSPPDQVGSLYHEEQDAK 141
Query: 199 LFASWGVDYLKYDNCF--------NLGIE----PKKRYPPMRDALNETGCSIFYSLCEWG 246
FA WG D LKYDNC+ N+ E P+ RY M AL G I + +CEWG
Sbjct: 142 TFAEWGADSLKYDNCYSDAATNYPNVNYEPSTSPRPRYEIMSSALARVGRPILFQICEWG 201
Query: 247 VDDPALWAGKVGNSWRTTGDINDTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGM 306
+D PALWA +GNSWR DI W S+ + +AGPG W D DML VGNG
Sbjct: 202 IDFPALWAPALGNSWRIGNDIIPAWRSIFRTLNQAVPNTDFAGPGQWADLDMLYVGNGVF 261
Query: 307 SYQEYRAHFSIWALMKAPLLIGCDVRN----MTAETFEILSNKEVIAVNQDPLGVQGRKV 362
S E + HFS+WA++K+PL IG +++ ++ + E+L K+VI NQD LGV +
Sbjct: 262 SLPEEQTHFSLWAILKSPLTIGAALKDDDTSISQASLEVLKQKDVIGFNQDALGVSA-SL 320
Query: 363 YVSGTDNCLQVWVGPLSGHRLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQ 422
+D +VW GPLSG+R VVA+ N ++ +T +GL+ + R++W K
Sbjct: 321 KRRWSDEGYEVWSGPLSGNRTVVAVINWRNESRDLTLDLPDVGLQYAQV--ARNIW-GKT 377
Query: 423 VTGDAVSSFGAQVDAH 438
V D +S+ A V H
Sbjct: 378 VVRDVRTSYTAGVAGH 393
|
Hydrolyzes a variety of simple alpha-D-galactoside as well as more complex molecules such as oligosaccharides and polysaccharides. Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) (taxid: 451804) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 455 | ||||||
| 297816956 | 430 | hypothetical protein ARALYDRAFT_486071 [ | 0.912 | 0.965 | 0.782 | 0.0 | |
| 224144974 | 380 | predicted protein [Populus trichocarpa] | 0.835 | 1.0 | 0.847 | 0.0 | |
| 356516253 | 418 | PREDICTED: alpha-galactosidase-like isof | 0.909 | 0.990 | 0.779 | 0.0 | |
| 22331822 | 437 | alpha-galactosidase [Arabidopsis thalian | 0.947 | 0.986 | 0.743 | 0.0 | |
| 7572929 | 434 | alpha-galactosidase-like protein [Arabid | 0.934 | 0.979 | 0.752 | 0.0 | |
| 225448651 | 427 | PREDICTED: alpha-galactosidase [Vitis vi | 0.936 | 0.997 | 0.761 | 0.0 | |
| 449457411 | 430 | PREDICTED: alpha-galactosidase-like [Cuc | 0.920 | 0.974 | 0.758 | 0.0 | |
| 353441550 | 430 | alpha galacdosidase 3 [Cucumis sativus] | 0.920 | 0.974 | 0.756 | 0.0 | |
| 52699549 | 431 | glycosyl hydrolase family-like protein [ | 0.896 | 0.946 | 0.749 | 0.0 | |
| 356516255 | 407 | PREDICTED: alpha-galactosidase-like isof | 0.883 | 0.987 | 0.721 | 1e-180 |
| >gi|297816956|ref|XP_002876361.1| hypothetical protein ARALYDRAFT_486071 [Arabidopsis lyrata subsp. lyrata] gi|297322199|gb|EFH52620.1| hypothetical protein ARALYDRAFT_486071 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 690 bits (1781), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/418 (78%), Positives = 361/418 (86%), Gaps = 3/418 (0%)
Query: 36 LSLIIDVGFAGRVVVPLLQSYEKASYSRGFSRNFGKIFDTSNYGILQLNNGLASTPQMGW 95
LS+++ +GRV PLLQS FS++F I+DTS YG LQLNNGLA TPQMGW
Sbjct: 14 LSVLVSQSISGRVKAPLLQSNTGGLV---FSKSFNSIYDTSMYGRLQLNNGLARTPQMGW 70
Query: 96 NSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFP 155
NSWNFFACNI+ET+IKETADAL+S+GLA+LGY HVNIDDCWS+ LRD KGQLVP TFP
Sbjct: 71 NSWNFFACNINETVIKETADALLSSGLADLGYIHVNIDDCWSNLLRDSKGQLVPHPETFP 130
Query: 156 SGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEKDDAPLFASWGVDYLKYDNCFN 215
SGIK LADYVH KGLKLGIYSDAGVFTCQVRPGSLFHE DDA +FASWGVDYLKYDNCFN
Sbjct: 131 SGIKLLADYVHSKGLKLGIYSDAGVFTCQVRPGSLFHEVDDADIFASWGVDYLKYDNCFN 190
Query: 216 LGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDTWASMT 275
LGI+P KRYPPMRDALN TG SIFYSLCEWGVDDPALWA +VGNSWRTT DINDTWASMT
Sbjct: 191 LGIKPIKRYPPMRDALNATGRSIFYSLCEWGVDDPALWAKEVGNSWRTTDDINDTWASMT 250
Query: 276 SIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMT 335
+IAD+N+KWA+YAGPGGWNDPDMLE+GNGGM+Y+EYR HFSIWALMKAPLLIGCDVRNMT
Sbjct: 251 TIADLNNKWAAYAGPGGWNDPDMLEIGNGGMTYEEYRGHFSIWALMKAPLLIGCDVRNMT 310
Query: 336 AETFEILSNKEVIAVNQDPLGVQGRKVYVSGTDNCLQVWVGPLSGHRLVVALWNRCPKAE 395
AETFEILSNKEVIAVNQDPLGVQGRK+ +G D+C QVW GPLSG R+VVALWNRC +
Sbjct: 311 AETFEILSNKEVIAVNQDPLGVQGRKIQANGEDDCQQVWSGPLSGDRIVVALWNRCSEQA 370
Query: 396 TITAQWDALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQVDAHDCQMYIFTPRTVTRS 453
TITA WD +GLES+ VSVRDLWQHK VT +A SF AQVDAHDC MY+ TP+TV+ S
Sbjct: 371 TITASWDVIGLESTISVSVRDLWQHKDVTENASGSFEAQVDAHDCHMYVLTPQTVSHS 428
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224144974|ref|XP_002325481.1| predicted protein [Populus trichocarpa] gi|222862356|gb|EEE99862.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/380 (84%), Positives = 346/380 (91%)
Query: 68 NFGKIFDTSNYGILQLNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGY 127
+F +F TSNYGI QLNNGLA TPQMGWNSWNFFACNI+ET+IKETADAL+STGLAELGY
Sbjct: 1 SFNNVFSTSNYGIFQLNNGLARTPQMGWNSWNFFACNINETVIKETADALISTGLAELGY 60
Query: 128 DHVNIDDCWSSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRP 187
+VNIDDCWSS RD KGQL+PD TFPSGIKALADYVH KGLKLGIYSDAG FTCQVRP
Sbjct: 61 VYVNIDDCWSSTKRDSKGQLIPDPKTFPSGIKALADYVHEKGLKLGIYSDAGAFTCQVRP 120
Query: 188 GSLFHEKDDAPLFASWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGV 247
GSL HEKDDA LFASWGVDYLKYDNCFNLGI PK+RYPPMRDALN TG ++FYSLCEWGV
Sbjct: 121 GSLLHEKDDAELFASWGVDYLKYDNCFNLGINPKERYPPMRDALNSTGRTVFYSLCEWGV 180
Query: 248 DDPALWAGKVGNSWRTTGDINDTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMS 307
DDPALWAGKVGNSWRTT DIND+WASMT+ AD+NDKWASYAGPGGWNDPDMLEVGNGGM+
Sbjct: 181 DDPALWAGKVGNSWRTTDDINDSWASMTTTADLNDKWASYAGPGGWNDPDMLEVGNGGMT 240
Query: 308 YQEYRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVYVSGT 367
Y EYRAHFSIWALMKAPLLIGCDVRNMTAET EIL+NKE+IAVNQDPLG+QGRKVY +GT
Sbjct: 241 YHEYRAHFSIWALMKAPLLIGCDVRNMTAETIEILTNKEIIAVNQDPLGIQGRKVYSTGT 300
Query: 368 DNCLQVWVGPLSGHRLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGDA 427
D CLQVW GPLSGHR+VVALWNRC KA TITA W ALGLESST VSVRDLWQ K + GDA
Sbjct: 301 DGCLQVWAGPLSGHRIVVALWNRCSKAATITAGWGALGLESSTSVSVRDLWQGKDIVGDA 360
Query: 428 VSSFGAQVDAHDCQMYIFTP 447
V+SFGA+VDAHDC ++IFTP
Sbjct: 361 VASFGARVDAHDCLIFIFTP 380
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356516253|ref|XP_003526810.1| PREDICTED: alpha-galactosidase-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/422 (77%), Positives = 359/422 (85%), Gaps = 8/422 (1%)
Query: 25 MKKKRFVFALVLSLIIDVGFAGRVV----VPLLQSYEKASYSRGFSRNFGKIFDTSNYGI 80
M K++ AL++ L+I F+ VV V LLQ+Y F NF I+DTS YG+
Sbjct: 1 MTKQKIRNALLVHLVILFFFSTSVVSARVVSLLQNYGNPI----FRSNFHSIYDTSKYGV 56
Query: 81 LQLNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPL 140
QL+NGL TPQMGWNSWNFFACNI+E +IKETADALVSTGLA+LGY +VNIDDCWSS
Sbjct: 57 FQLSNGLGKTPQMGWNSWNFFACNINEMVIKETADALVSTGLADLGYVYVNIDDCWSSVT 116
Query: 141 RDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEKDDAPLF 200
R+LKGQLVPD TFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGS+FHE DDA LF
Sbjct: 117 RNLKGQLVPDHKTFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSIFHETDDADLF 176
Query: 201 ASWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNS 260
ASWGVDYLKYDNC+NLGI PK+RYPPMRDALN TG IFYSLCEWGV+DPALWA KVGNS
Sbjct: 177 ASWGVDYLKYDNCYNLGIPPKERYPPMRDALNATGQKIFYSLCEWGVEDPALWADKVGNS 236
Query: 261 WRTTGDINDTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWAL 320
WRTTGDIND+WASMT+IAD+NDKWA+YAGPGGWNDPDMLEVGNGGM+YQEYRAHFSIWAL
Sbjct: 237 WRTTGDINDSWASMTTIADLNDKWAAYAGPGGWNDPDMLEVGNGGMTYQEYRAHFSIWAL 296
Query: 321 MKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVYVSGTDNCLQVWVGPLSG 380
KAPLLIGCDVRN+TAET EILSNKEVIA+NQD LGVQGRKV VSG D C QVW GPLSG
Sbjct: 297 AKAPLLIGCDVRNLTAETLEILSNKEVIAINQDSLGVQGRKVQVSGADGCRQVWAGPLSG 356
Query: 381 HRLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQVDAHDC 440
+RL VALWNRC K TITA W+ALGLES VSVRDLWQHK VTGDAVSSF A+VD HDC
Sbjct: 357 NRLAVALWNRCSKVATITASWEALGLESGVHVSVRDLWQHKVVTGDAVSSFSARVDIHDC 416
Query: 441 QM 442
Q+
Sbjct: 417 QL 418
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|22331822|ref|NP_191190.2| alpha-galactosidase [Arabidopsis thaliana] gi|18377735|gb|AAL67017.1| putative alpha-galactosidase [Arabidopsis thaliana] gi|21281028|gb|AAM45068.1| putative alpha-galactosidase [Arabidopsis thaliana] gi|332645987|gb|AEE79508.1| alpha-galactosidase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/437 (74%), Positives = 363/437 (83%), Gaps = 6/437 (1%)
Query: 20 VAMSSMKKKRFVFAL---VLSLIIDVGFAGRVVVPLLQSYEKASYSRGFSRNFGKIFDTS 76
V M MK + LS+++ AGRV PLLQS FS++F I+DTS
Sbjct: 2 VIMKKMKDSVLFLVVGLFSLSVLVSQSIAGRVKAPLLQSNTGGLV---FSKSFNSIYDTS 58
Query: 77 NYGILQLNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCW 136
YG LQLNNGLA TPQMGWNSWNFFACNI+ET+IKETADALVS+GLA+LGY HVNIDDCW
Sbjct: 59 MYGRLQLNNGLARTPQMGWNSWNFFACNINETVIKETADALVSSGLADLGYIHVNIDDCW 118
Query: 137 SSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEKDD 196
S+ LRD +GQLVP TFPSGIK LADYVH KGLKLGIYSDAGVFTC+V PGSLFHE DD
Sbjct: 119 SNLLRDSEGQLVPHPETFPSGIKLLADYVHSKGLKLGIYSDAGVFTCEVHPGSLFHEVDD 178
Query: 197 APLFASWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGK 256
A +FASWGVDYLKYDNCFNLGI+P +RYPPMRDALN TG SIFYSLCEWGVDDPALWA +
Sbjct: 179 ADIFASWGVDYLKYDNCFNLGIKPIERYPPMRDALNATGRSIFYSLCEWGVDDPALWAKE 238
Query: 257 VGNSWRTTGDINDTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFS 316
VGNSWRTT DINDTWASMT+IAD+N+KWA+YAGPGGWNDPDMLE+GNGGM+Y+EYR HFS
Sbjct: 239 VGNSWRTTDDINDTWASMTTIADLNNKWAAYAGPGGWNDPDMLEIGNGGMTYEEYRGHFS 298
Query: 317 IWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVYVSGTDNCLQVWVG 376
IWALMKAPLLIGCDVRNMTAET EILSNKE+IAVNQDPLGVQGRK+ +G ++C QVW G
Sbjct: 299 IWALMKAPLLIGCDVRNMTAETLEILSNKEIIAVNQDPLGVQGRKIQANGENDCQQVWSG 358
Query: 377 PLSGHRLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQVD 436
PLSG R+VVALWNRC + TITA WD +GLES+ VSVRDLWQHK VT + SF AQVD
Sbjct: 359 PLSGDRMVVALWNRCSEPATITASWDMIGLESTISVSVRDLWQHKDVTENTSGSFEAQVD 418
Query: 437 AHDCQMYIFTPRTVTRS 453
AHDC MY+ TP+TV+ S
Sbjct: 419 AHDCHMYVLTPQTVSHS 435
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|7572929|emb|CAB87430.1| alpha-galactosidase-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/433 (75%), Positives = 363/433 (83%), Gaps = 8/433 (1%)
Query: 26 KKKRFVFALV-----LSLIIDVGFAGRVVVPLLQSYEKASYSRGFSRNFGKIFDTSNYGI 80
K K V LV LS+++ AGRV PLLQS FS++F I+DTS YG
Sbjct: 3 KMKDSVLFLVVGLFSLSVLVSQSIAGRVKAPLLQSNTGGLV---FSKSFNSIYDTSMYGR 59
Query: 81 LQLNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPL 140
LQLNNGLA TPQMGWNSWNFFACNI+ET+IKETADALVS+GLA+LGY HVNIDDCWS+ L
Sbjct: 60 LQLNNGLARTPQMGWNSWNFFACNINETVIKETADALVSSGLADLGYIHVNIDDCWSNLL 119
Query: 141 RDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEKDDAPLF 200
RD +GQLVP TFPSGIK LADYVH KGLKLGIYSDAGVFTC+V PGSLFHE DDA +F
Sbjct: 120 RDSEGQLVPHPETFPSGIKLLADYVHSKGLKLGIYSDAGVFTCEVHPGSLFHEVDDADIF 179
Query: 201 ASWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNS 260
ASWGVDYLKYDNCFNLGI+P +RYPPMRDALN TG SIFYSLCEWGVDDPALWA +VGNS
Sbjct: 180 ASWGVDYLKYDNCFNLGIKPIERYPPMRDALNATGRSIFYSLCEWGVDDPALWAKEVGNS 239
Query: 261 WRTTGDINDTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWAL 320
WRTT DINDTWASMT+IAD+N+KWA+YAGPGGWNDPDMLE+GNGGM+Y+EYR HFSIWAL
Sbjct: 240 WRTTDDINDTWASMTTIADLNNKWAAYAGPGGWNDPDMLEIGNGGMTYEEYRGHFSIWAL 299
Query: 321 MKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVYVSGTDNCLQVWVGPLSG 380
MKAPLLIGCDVRNMTAET EILSNKE+IAVNQDPLGVQGRK+ +G ++C QVW GPLSG
Sbjct: 300 MKAPLLIGCDVRNMTAETLEILSNKEIIAVNQDPLGVQGRKIQANGENDCQQVWSGPLSG 359
Query: 381 HRLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQVDAHDC 440
R+VVALWNRC + TITA WD +GLES+ VSVRDLWQHK VT + SF AQVDAHDC
Sbjct: 360 DRMVVALWNRCSEPATITASWDMIGLESTISVSVRDLWQHKDVTENTSGSFEAQVDAHDC 419
Query: 441 QMYIFTPRTVTRS 453
MY+ TP+TV+ S
Sbjct: 420 HMYVLTPQTVSHS 432
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225448651|ref|XP_002279730.1| PREDICTED: alpha-galactosidase [Vitis vinifera] gi|297736508|emb|CBI25379.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/432 (76%), Positives = 372/432 (86%), Gaps = 6/432 (1%)
Query: 25 MKKKRFVFALVLSL-IIDVGFAGRVVVPLLQSYEKASYSRGFSRNFGKIFDTSNYGILQL 83
M K L L L I VG AGRVV PL + ++K++ SR FS IFD S YGILQL
Sbjct: 1 MVKGSVHLLLFLYLSAISVGIAGRVV-PLHEPFDKSTSSRSFS----SIFDNSKYGILQL 55
Query: 84 NNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDL 143
NNGLA TPQMGWNSWNFFACNI+ET+IKETADALVSTGLA+LGY +VNIDDCWSS RD
Sbjct: 56 NNGLARTPQMGWNSWNFFACNINETVIKETADALVSTGLADLGYVYVNIDDCWSSLERDS 115
Query: 144 KGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEKDDAPLFASW 203
KGQLVPD TFPSGIKALADYVH KGLKLGIYSDAG+FTCQVRPGS++HE+DDA LFASW
Sbjct: 116 KGQLVPDPKTFPSGIKALADYVHAKGLKLGIYSDAGIFTCQVRPGSIYHERDDAELFASW 175
Query: 204 GVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSWRT 263
GVDYLKYDNC+NLGI+P++RYPPMR+ALN TG +IFYSLCEWGVDDPALWAGKVGNSWRT
Sbjct: 176 GVDYLKYDNCYNLGIKPEERYPPMRNALNATGRTIFYSLCEWGVDDPALWAGKVGNSWRT 235
Query: 264 TGDINDTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALMKA 323
T DIND+WASMT+IAD+ND+WA+YAGPGGWNDPDMLEVGNGGM+ +EYRAHFSIWALMKA
Sbjct: 236 TDDINDSWASMTTIADLNDEWAAYAGPGGWNDPDMLEVGNGGMTLEEYRAHFSIWALMKA 295
Query: 324 PLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVYVSGTDNCLQVWVGPLSGHRL 383
PLL+GCDVRN+TAETFEI+ NKEVI +NQD LG+QGRKV+VSG D C QVW GPLSGHRL
Sbjct: 296 PLLVGCDVRNITAETFEIIGNKEVIDINQDSLGIQGRKVHVSGKDGCRQVWAGPLSGHRL 355
Query: 384 VVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQVDAHDCQMY 443
VVALWNRC KA TIT W+ LGLESS VS+RDLW+H ++GDAV+SFG+ V +HDC MY
Sbjct: 356 VVALWNRCSKAATITVGWEVLGLESSMSVSIRDLWKHVDLSGDAVASFGSLVASHDCGMY 415
Query: 444 IFTPRTVTRSVI 455
IFTP + +RS +
Sbjct: 416 IFTPVSASRSAV 427
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449457411|ref|XP_004146442.1| PREDICTED: alpha-galactosidase-like [Cucumis sativus] gi|449491655|ref|XP_004158965.1| PREDICTED: alpha-galactosidase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 665 bits (1717), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/423 (75%), Positives = 351/423 (82%), Gaps = 4/423 (0%)
Query: 31 VFALVLSLIIDVGFAGRVVVPLLQSYEKASYSRGFSRNFGKIFDTSNYGILQLNNGLAST 90
VF L+L L V LL Y+K+ + F R IFDTS YGILQL NGLA T
Sbjct: 10 VFLLILLLSAAYVAIAERRVSLLNGYDKSIFKSSFHR----IFDTSKYGILQLQNGLART 65
Query: 91 PQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPD 150
PQMGWNSWNFFAC+I+ET+IKETADALVSTGLAELGY +VNIDDCW++ RD K QLVPD
Sbjct: 66 PQMGWNSWNFFACDINETLIKETADALVSTGLAELGYVYVNIDDCWNTQKRDSKDQLVPD 125
Query: 151 TITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEKDDAPLFASWGVDYLKY 210
FPSGIK LADYVH K LKLGIYSDAG+FTCQVR GSL+HE DDA LFASWGVDYLKY
Sbjct: 126 PKGFPSGIKPLADYVHSKDLKLGIYSDAGLFTCQVRAGSLYHENDDAQLFASWGVDYLKY 185
Query: 211 DNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDT 270
DNCFNLGI+P KRYPPMRDALN TG SIFYSLCEWGVDDPALWAGKVGNSWRTT DINDT
Sbjct: 186 DNCFNLGIKPIKRYPPMRDALNATGRSIFYSLCEWGVDDPALWAGKVGNSWRTTDDINDT 245
Query: 271 WASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALMKAPLLIGCD 330
WASMT++AD+N+KWA+YAGPGGWNDPDMLEVGNGGM+YQEYRAHFSIWALMK+PLLIGCD
Sbjct: 246 WASMTTLADLNNKWAAYAGPGGWNDPDMLEVGNGGMTYQEYRAHFSIWALMKSPLLIGCD 305
Query: 331 VRNMTAETFEILSNKEVIAVNQDPLGVQGRKVYVSGTDNCLQVWVGPLSGHRLVVALWNR 390
VRNMT ET EIL NKEVIAVNQDPLGVQGRKV V G D CLQVW GPLSG RL V LWNR
Sbjct: 306 VRNMTKETSEILMNKEVIAVNQDPLGVQGRKVKVFGKDGCLQVWAGPLSGSRLAVVLWNR 365
Query: 391 CPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQVDAHDCQMYIFTPRTV 450
C A TIT W+ALGL+ +T VSVRDLW H+ V GDA+SSFGA+VD HDC+M++FTP
Sbjct: 366 CSVASTITTDWNALGLKPNTSVSVRDLWLHEDVAGDAMSSFGAEVDPHDCKMFVFTPVAT 425
Query: 451 TRS 453
R+
Sbjct: 426 FRA 428
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|353441550|gb|AEQ94270.1| alpha galacdosidase 3 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 665 bits (1715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/423 (75%), Positives = 351/423 (82%), Gaps = 4/423 (0%)
Query: 31 VFALVLSLIIDVGFAGRVVVPLLQSYEKASYSRGFSRNFGKIFDTSNYGILQLNNGLAST 90
VF L+L L V LL Y+K+ + F R IFDTS YGILQL NGLA T
Sbjct: 10 VFLLILLLSAAYVAIAERRVSLLNGYDKSIFKSSFHR----IFDTSKYGILQLQNGLART 65
Query: 91 PQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPD 150
PQMGWNSWNFFAC+I+ET+IKETADALVSTGLAELGY +VNIDDCW++ RD K QLVPD
Sbjct: 66 PQMGWNSWNFFACDINETLIKETADALVSTGLAELGYVYVNIDDCWNTQKRDSKDQLVPD 125
Query: 151 TITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEKDDAPLFASWGVDYLKY 210
FPSGIK LADYVH K LKLGIYSDAG+FTCQVR GSL+HE DDA LFASWGVDYLKY
Sbjct: 126 PKGFPSGIKPLADYVHSKDLKLGIYSDAGLFTCQVRAGSLYHENDDAQLFASWGVDYLKY 185
Query: 211 DNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDT 270
DNCFNLGI+P KRYPPMRDALN TG SIFYSLCEWGVDDPALWAGKVGNSWRTT DINDT
Sbjct: 186 DNCFNLGIKPIKRYPPMRDALNATGRSIFYSLCEWGVDDPALWAGKVGNSWRTTDDINDT 245
Query: 271 WASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALMKAPLLIGCD 330
WASMT++AD+N+KWA+YAGPGGWNDPDMLEVGNGGM+YQEYRAHFSIWALMK+PLLIGCD
Sbjct: 246 WASMTTLADLNNKWAAYAGPGGWNDPDMLEVGNGGMTYQEYRAHFSIWALMKSPLLIGCD 305
Query: 331 VRNMTAETFEILSNKEVIAVNQDPLGVQGRKVYVSGTDNCLQVWVGPLSGHRLVVALWNR 390
VRNMT ET EIL NKEVIAVNQDPLGVQGRKV V G D CLQ+W GPLSG RL V LWNR
Sbjct: 306 VRNMTKETSEILMNKEVIAVNQDPLGVQGRKVKVFGKDGCLQIWAGPLSGSRLAVVLWNR 365
Query: 391 CPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQVDAHDCQMYIFTPRTV 450
C A TIT W+ALGL+ +T VSVRDLW H+ V GDA+SSFGA+VD HDC+M++FTP
Sbjct: 366 CSVASTITTDWNALGLKPNTSVSVRDLWLHEDVAGDAMSSFGAEVDPHDCKMFVFTPVAT 425
Query: 451 TRS 453
R+
Sbjct: 426 FRA 428
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|52699549|gb|AAU86897.1| glycosyl hydrolase family-like protein [Salvia miltiorrhiza] | Back alignment and taxonomy information |
|---|
Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/415 (74%), Positives = 352/415 (84%), Gaps = 7/415 (1%)
Query: 33 ALVLSLIIDVGFAGRVVVPLLQSYEKASYSRGFSRNFGKIFDTSNYGILQLNNGLASTPQ 92
A+V + +I V + R++ PL Y G + I+DTSNYGILQLNNGLA TPQ
Sbjct: 17 AIVCANLISVAVSVRML-PL------HPYLNGQEKPISNIYDTSNYGILQLNNGLAKTPQ 69
Query: 93 MGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTI 152
MGWNSWNFFAC+I+E +IKETADAL++TGLA+LGY++VNIDDCWS +RD KGQLVPD+
Sbjct: 70 MGWNSWNFFACDINEIVIKETADALLTTGLAKLGYNYVNIDDCWSELVRDSKGQLVPDSK 129
Query: 153 TFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEKDDAPLFASWGVDYLKYDN 212
TFPSGIKALADYVH KGLKLGIYSDAG FTCQVRPGS+FHE DDA LFASWGVDYLKYDN
Sbjct: 130 TFPSGIKALADYVHSKGLKLGIYSDAGAFTCQVRPGSIFHESDDAKLFASWGVDYLKYDN 189
Query: 213 CFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDTWA 272
CFNLGI PK+RYPPMRDALN TG SIFYSLCEWGVDDPALWAG VGNSWRTT DIND+WA
Sbjct: 190 CFNLGIPPKERYPPMRDALNATGRSIFYSLCEWGVDDPALWAGTVGNSWRTTDDINDSWA 249
Query: 273 SMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALMKAPLLIGCDVR 332
SMT+IAD+NDKWA+YAGPGGWNDPDMLEVGNGGM+Y+EYRAHFSIWALMKAPLLIGCDVR
Sbjct: 250 SMTTIADLNDKWAAYAGPGGWNDPDMLEVGNGGMTYEEYRAHFSIWALMKAPLLIGCDVR 309
Query: 333 NMTAETFEILSNKEVIAVNQDPLGVQGRKVYVSGTDNCLQVWVGPLSGHRLVVALWNRCP 392
N+T+E FEILSN+EVI+VNQDPLGVQGRKVY G DN QVW GPLSG RL V LWNR
Sbjct: 310 NITSEAFEILSNEEVISVNQDPLGVQGRKVYAYGADNSYQVWAGPLSGQRLAVVLWNRGS 369
Query: 393 KAETITAQWDALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQVDAHDCQMYIFTP 447
K +IT +WD LGLESS VSVRDLW+H V+ ++++ F A+VDAH +MY+FTP
Sbjct: 370 KTASITVKWDVLGLESSISVSVRDLWKHNYVSANSMAYFSARVDAHSSEMYVFTP 424
|
Source: Salvia miltiorrhiza Species: Salvia miltiorrhiza Genus: Salvia Family: Lamiaceae Order: Lamiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356516255|ref|XP_003526811.1| PREDICTED: alpha-galactosidase-like isoform 2 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 638 bits (1645), Expect = e-180, Method: Compositional matrix adjust.
Identities = 313/434 (72%), Positives = 345/434 (79%), Gaps = 32/434 (7%)
Query: 25 MKKKRFVFALVLSLIIDVGFAGRVV----VPLLQSYEKASYSRGFSRNFGKIFDTSNYGI 80
M K++ AL++ L+I F+ VV V LLQ+Y F NF I+DTS YG+
Sbjct: 1 MTKQKIRNALLVHLVILFFFSTSVVSARVVSLLQNYGNPI----FRSNFHSIYDTSKYGV 56
Query: 81 LQLNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPL 140
QL+NGL TPQMGWNSWNFFACNI+E +IKETADALVSTGLA+LGY +VNI
Sbjct: 57 FQLSNGLGKTPQMGWNSWNFFACNINEMVIKETADALVSTGLADLGYVYVNI-------- 108
Query: 141 RDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEKDDAPLF 200
G ++DYVHGKGLKLGIYSDAGVFTCQVRPGS+FHE DDA LF
Sbjct: 109 ----------------GTLLVSDYVHGKGLKLGIYSDAGVFTCQVRPGSIFHETDDADLF 152
Query: 201 ASWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNS 260
ASWGVDYLKYDNC+NLGI PK+RYPPMRDALN TG IFYSLCEWGV+DPALWA KVGNS
Sbjct: 153 ASWGVDYLKYDNCYNLGIPPKERYPPMRDALNATGQKIFYSLCEWGVEDPALWADKVGNS 212
Query: 261 WRTTGDINDTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWAL 320
WRTTGDIND+WASMT+IAD+NDKWA+YAGPGGWNDPDMLEVGNGGM+YQEYRAHFSIWAL
Sbjct: 213 WRTTGDINDSWASMTTIADLNDKWAAYAGPGGWNDPDMLEVGNGGMTYQEYRAHFSIWAL 272
Query: 321 MKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVYVSGTDNCLQVWVGPLSG 380
KAPLLIGCDVRN+TAET EILSNKEVIA+NQD LGVQGRKV VSG D C QVW GPLSG
Sbjct: 273 AKAPLLIGCDVRNLTAETLEILSNKEVIAINQDSLGVQGRKVQVSGADGCRQVWAGPLSG 332
Query: 381 HRLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQVDAHDC 440
+RL VALWNRC K TITA W+ALGLES VSVRDLWQHK VTGDAVSSF A+VD HDC
Sbjct: 333 NRLAVALWNRCSKVATITASWEALGLESGVHVSVRDLWQHKVVTGDAVSSFSARVDIHDC 392
Query: 441 QMYIFTPRTVTRSV 454
Q+YIF P TV+ SV
Sbjct: 393 QLYIFAPFTVSHSV 406
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 455 | ||||||
| TAIR|locus:2078416 | 437 | AT3G56310 [Arabidopsis thalian | 0.945 | 0.983 | 0.746 | 1.4e-181 | |
| UNIPROTKB|Q7XIV4 | 425 | OJ1409_C08.26 "Os07g0679300 pr | 0.841 | 0.901 | 0.757 | 2.9e-167 | |
| TAIR|locus:2150763 | 396 | AGAL2 "alpha-galactosidase 2" | 0.793 | 0.911 | 0.644 | 4.5e-130 | |
| UNIPROTKB|Q9FXT4 | 417 | LOC_Os10g35110 "Alpha-galactos | 0.786 | 0.858 | 0.651 | 1.7e-128 | |
| TAIR|locus:2150778 | 410 | AGAL1 "alpha-galactosidase 1" | 0.795 | 0.882 | 0.614 | 1.1e-124 | |
| UNIPROTKB|Q23YJ0 | 382 | TTHERM_01181990 "Melibiase fam | 0.780 | 0.929 | 0.565 | 1.1e-110 | |
| UNIPROTKB|Q23DW6 | 381 | TTHERM_00043770 "Alpha-galacto | 0.771 | 0.921 | 0.571 | 3e-108 | |
| UNIPROTKB|Q9S2C9 | 680 | Q9S2C9 "Probable secreted alph | 0.758 | 0.507 | 0.530 | 4.2e-95 | |
| DICTYBASE|DDB_G0271490 | 385 | melA "putative alpha-galactosi | 0.795 | 0.940 | 0.485 | 5e-92 | |
| UNIPROTKB|B3PGJ1 | 404 | agaA "Alpha-galactosidase A" [ | 0.778 | 0.876 | 0.468 | 2.4e-83 |
| TAIR|locus:2078416 AT3G56310 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1762 (625.3 bits), Expect = 1.4e-181, P = 1.4e-181
Identities = 327/438 (74%), Positives = 366/438 (83%)
Query: 20 VAMSSMKKKRFVFALV----LSLIIDVGFAGRVVVPLLQSYEKASYSRGFSRNFGKIFDT 75
V M MK +F +V LS+++ AGRV PLLQS FS++F I+DT
Sbjct: 2 VIMKKMKDS-VLFLVVGLFSLSVLVSQSIAGRVKAPLLQSNTGGLV---FSKSFNSIYDT 57
Query: 76 SNYGILQLNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDC 135
S YG LQLNNGLA TPQMGWNSWNFFACNI+ET+IKETADALVS+GLA+LGY HVNIDDC
Sbjct: 58 SMYGRLQLNNGLARTPQMGWNSWNFFACNINETVIKETADALVSSGLADLGYIHVNIDDC 117
Query: 136 WSSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEKD 195
WS+ LRD +GQLVP TFPSGIK LADYVH KGLKLGIYSDAGVFTC+V PGSLFHE D
Sbjct: 118 WSNLLRDSEGQLVPHPETFPSGIKLLADYVHSKGLKLGIYSDAGVFTCEVHPGSLFHEVD 177
Query: 196 DAPLFASWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAG 255
DA +FASWGVDYLKYDNCFNLGI+P +RYPPMRDALN TG SIFYSLCEWGVDDPALWA
Sbjct: 178 DADIFASWGVDYLKYDNCFNLGIKPIERYPPMRDALNATGRSIFYSLCEWGVDDPALWAK 237
Query: 256 KVGNSWRTTGDINDTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHF 315
+VGNSWRTT DINDTWASMT+IAD+N+KWA+YAGPGGWNDPDMLE+GNGGM+Y+EYR HF
Sbjct: 238 EVGNSWRTTDDINDTWASMTTIADLNNKWAAYAGPGGWNDPDMLEIGNGGMTYEEYRGHF 297
Query: 316 SIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVYVSGTDNCLQVWV 375
SIWALMKAPLLIGCDVRNMTAET EILSNKE+IAVNQDPLGVQGRK+ +G ++C QVW
Sbjct: 298 SIWALMKAPLLIGCDVRNMTAETLEILSNKEIIAVNQDPLGVQGRKIQANGENDCQQVWS 357
Query: 376 GPLSGHRLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQV 435
GPLSG R+VVALWNRC + TITA WD +GLES+ VSVRDLWQHK VT + SF AQV
Sbjct: 358 GPLSGDRMVVALWNRCSEPATITASWDMIGLESTISVSVRDLWQHKDVTENTSGSFEAQV 417
Query: 436 DAHDCQMYIFTPRTVTRS 453
DAHDC MY+ TP+TV+ S
Sbjct: 418 DAHDCHMYVLTPQTVSHS 435
|
|
| UNIPROTKB|Q7XIV4 OJ1409_C08.26 "Os07g0679300 protein" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 1627 (577.8 bits), Expect = 2.9e-167, P = 2.9e-167
Identities = 290/383 (75%), Positives = 328/383 (85%)
Query: 71 KIFDTSNYGILQLNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHV 130
+++DTSNYG LQLNNGLA TPQMGWNSWNFFACNI+ET+I++TADALVSTGLA+LGY++V
Sbjct: 42 RLYDTSNYGKLQLNNGLALTPQMGWNSWNFFACNINETVIRDTADALVSTGLADLGYNYV 101
Query: 131 NIDDCWSSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSL 190
NIDDCWS+ R K QL+PD TFPSGIK LADYVHGKGLKLGIYSDAG+FTCQVRPGSL
Sbjct: 102 NIDDCWSNVKRGKKDQLLPDPKTFPSGIKDLADYVHGKGLKLGIYSDAGIFTCQVRPGSL 161
Query: 191 FHEKDDAPLFASWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDP 250
HEKDDA +FASWGVDYLKYDNC+NLGI+PK RYPPMRDALN TG IFYSLCEWG DDP
Sbjct: 162 HHEKDDAAIFASWGVDYLKYDNCYNLGIKPKDRYPPMRDALNSTGRQIFYSLCEWGQDDP 221
Query: 251 ALWAGKVGNSWRTTGDINDTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQE 310
ALWAGKVGNSWRTT DI DTW SMT IAD N+KWASYAGPGGWNDPDMLEVGNGGM++ E
Sbjct: 222 ALWAGKVGNSWRTTDDIQDTWKSMTDIADKNNKWASYAGPGGWNDPDMLEVGNGGMTFAE 281
Query: 311 YRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVYVSGTDNC 370
YRAHFSIWALMKAPLLIGCDVRNMT ET EILSNKEVI VNQDPLGVQGR++ G + C
Sbjct: 282 YRAHFSIWALMKAPLLIGCDVRNMTKETMEILSNKEVIQVNQDPLGVQGRRILGQGKNGC 341
Query: 371 LQVWVGPLSGHRLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGDAVSS 430
+VW GPLSG+RL V LWNRC ++ I + ++GL+ S+ SVRDLW+H+ ++ + V +
Sbjct: 342 QEVWAGPLSGNRLAVVLWNRCEESANIIVKLPSVGLDGSSPYSVRDLWKHETLSENVVGT 401
Query: 431 FGAQVDAHDCQMYIFTPRTVTRS 453
FGAQVD HDC+MYIFTP S
Sbjct: 402 FGAQVDVHDCKMYIFTPAVTVAS 424
|
|
| TAIR|locus:2150763 AGAL2 "alpha-galactosidase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1276 (454.2 bits), Expect = 4.5e-130, P = 4.5e-130
Identities = 237/368 (64%), Positives = 276/368 (75%)
Query: 83 LNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRD 142
+NNGLA +PQMGWNSWN F CNI+ET+IK+TADA+VS+GL+ +GY ++NIDDCW RD
Sbjct: 32 MNNGLALSPQMGWNSWNHFQCNINETLIKQTADAMVSSGLSAIGYKYINIDDCWGELKRD 91
Query: 143 LKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTC-QVRPGSLFHEKDDAPLFA 201
+G LV TFPSGIKAL+DYVH KGLKLGIYSDAG TC Q PGSL HE+ DA FA
Sbjct: 92 SQGSLVAKASTFPSGIKALSDYVHSKGLKLGIYSDAGTLTCSQTMPGSLGHEEQDAKTFA 151
Query: 202 SWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSW 261
SWG+DYLKYDNC N G P++RYP M AL +G SIF+SLCEWG +DPA WAG +GNSW
Sbjct: 152 SWGIDYLKYDNCENTGTSPRERYPKMSKALLNSGRSIFFSLCEWGQEDPATWAGDIGNSW 211
Query: 262 RTTGDINDTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALM 321
RTTGDI D W SMT IAD ND+WASYA PG WNDPDMLEVGNGGM+ +EY +HFSIWAL
Sbjct: 212 RTTGDIQDNWKSMTLIADQNDRWASYARPGSWNDPDMLEVGNGGMTKEEYMSHFSIWALA 271
Query: 322 KAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVYVSGTDNCLQVWVGPLSGH 381
KAPLLIGCD+R+M TFE+LSNKEVIAVNQD LG+QG+KV G L+VW GPLS
Sbjct: 272 KAPLLIGCDLRSMDKVTFELLSNKEVIAVNQDKLGIQGKKVKKEGD---LEVWAGPLSKK 328
Query: 382 RLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGDAVSS-FGAQVDAHDC 440
R+ V LWNR + ITA+W +GL SS V+ RDLW+H T V A V+ H C
Sbjct: 329 RVAVILWNRGSASANITARWAEIGLNSSDIVNARDLWEHS--TYSCVKKQLSALVEPHAC 386
Query: 441 QMYIFTPR 448
+MY T R
Sbjct: 387 KMYTLTRR 394
|
|
| UNIPROTKB|Q9FXT4 LOC_Os10g35110 "Alpha-galactosidase" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 1261 (449.0 bits), Expect = 1.7e-128, P = 1.7e-128
Identities = 237/364 (65%), Positives = 271/364 (74%)
Query: 85 NGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLK 144
NGL TPQMGWNSWN F C I+E II+ETADALV+TGLA+LGY +VNIDDCW+ RD +
Sbjct: 58 NGLGRTPQMGWNSWNHFYCGINEQIIRETADALVNTGLAKLGYQYVNIDDCWAEYSRDSQ 117
Query: 145 GQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVR-PGSLFHEKDDAPLFASW 203
G VP+ TFPSGIKALADYVH KGLKLGIYSDAG TC + PGSL HE+ D FASW
Sbjct: 118 GNFVPNRQTFPSGIKALADYVHAKGLKLGIYSDAGSQTCSNKMPGSLDHEEQDVKTFASW 177
Query: 204 GVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSWRT 263
GVDYLKYDNC + G +RY M +A+ G +IF+SLCEWG ++PA WAG++GNSWRT
Sbjct: 178 GVDYLKYDNCNDAGRSVMERYTRMSNAMKTYGKNIFFSLCEWGKENPATWAGRMGNSWRT 237
Query: 264 TGDINDTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALMKA 323
TGDI D W SMTS AD ND+WA+YAGPGGWNDPDMLEVGNGGMS EYR+HFSIWAL KA
Sbjct: 238 TGDIADNWGSMTSRADENDQWAAYAGPGGWNDPDMLEVGNGGMSEAEYRSHFSIWALAKA 297
Query: 324 PLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVYVSGTDNCLQVWVGPLSGHRL 383
PLLIGCDVR+M+ +T ILSN EVIAVNQD LGVQG+KV +DN L+VW GPLS +R
Sbjct: 298 PLLIGCDVRSMSQQTKNILSNSEVIAVNQDSLGVQGKKVQ---SDNGLEVWAGPLSNNRK 354
Query: 384 VVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQVDAHDCQMY 443
V LWNR TITA W +GL S V+ RDLW H A A V HDC+MY
Sbjct: 355 AVVLWNRQSYQATITAHWSNIGLAGSVAVTARDLWAHSSFA--AQGQISASVAPHDCKMY 412
Query: 444 IFTP 447
+ TP
Sbjct: 413 VLTP 416
|
|
| TAIR|locus:2150778 AGAL1 "alpha-galactosidase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1225 (436.3 bits), Expect = 1.1e-124, P = 1.1e-124
Identities = 225/366 (61%), Positives = 275/366 (75%)
Query: 83 LNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRD 142
L NGL TP MGWNSWN F+CNI E +IKETADALV+TGL++LGY++VNIDDCW+ RD
Sbjct: 46 LTNGLGVTPPMGWNSWNHFSCNIDEKMIKETADALVTTGLSKLGYNYVNIDDCWAEISRD 105
Query: 143 LKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTC-QVRPGSLFHEKDDAPLFA 201
KG LVP TFPSGIKA+ADYVH KGLKLGIYSDAG FTC + PGSL +E+ DA FA
Sbjct: 106 SKGSLVPKKSTFPSGIKAVADYVHSKGLKLGIYSDAGYFTCSKTMPGSLGYEEHDAKTFA 165
Query: 202 SWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSW 261
WG+DYLKYDNC + G +P RYP M AL ++G IF+SLCEWG PALW VGNSW
Sbjct: 166 EWGIDYLKYDNCNSDGSKPTVRYPVMTRALMKSGRPIFHSLCEWGDMHPALWGSPVGNSW 225
Query: 262 RTTGDINDTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALM 321
RTT DI DTW SM SIAD+N+ +A +A PGGWNDPDMLEVGNGGM+ EY HFSIWA+
Sbjct: 226 RTTNDIKDTWLSMISIADMNEVYAEHARPGGWNDPDMLEVGNGGMTKDEYIVHFSIWAIS 285
Query: 322 KAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVYVSGTDNCLQVWVGPLSGH 381
KAPLL+GCD+RNMT ET EI++NKEVIA+NQDP GVQ +KV + G L+VW GPLSG+
Sbjct: 286 KAPLLLGCDIRNMTKETMEIVANKEVIAINQDPHGVQAKKVRMEGD---LEVWAGPLSGY 342
Query: 382 RLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQVDAHDCQ 441
R+ + L NR P +ITA W+ + + +++ V RDLW+H+ + V + A VD+H C+
Sbjct: 343 RVALLLLNRGPSRTSITALWEDIEIPANSIVEARDLWEHQTLKQKFVGNLTATVDSHACK 402
Query: 442 MYIFTP 447
+Y+ P
Sbjct: 403 LYVLKP 408
|
|
| UNIPROTKB|Q23YJ0 TTHERM_01181990 "Melibiase family protein" [Tetrahymena thermophila SB210 (taxid:312017)] | Back alignment and assigned GO terms |
|---|
Score = 1093 (389.8 bits), Expect = 1.1e-110, P = 1.1e-110
Identities = 206/364 (56%), Positives = 262/364 (71%)
Query: 76 SNYGILQ-LNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDD 134
S + I+ LNNGLA TP MGWNSWN F C+I+E +IK+TADA+VS+GLA+ GY +VN+DD
Sbjct: 13 STFAIINCLNNGLALTPAMGWNSWNHFHCDINEDLIKQTADAIVSSGLADAGYKYVNLDD 72
Query: 135 CWSSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEK 194
CW RD +G + D FPSGIKALADYVH KGLK G+YSDAG FTC+ RPGSL +E
Sbjct: 73 CWQIS-RDSEGYIQEDKAKFPSGIKALADYVHSKGLKFGLYSDAGDFTCEHRPGSLGYEV 131
Query: 195 DDAPLFASWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWA 254
DA +A WGVDYLKYDNC+N I P+ RYPPMRDALN TG I++S+CEWG DPA WA
Sbjct: 132 KDAERYAEWGVDYLKYDNCYNNNIPPQVRYPPMRDALNSTGHPIYFSMCEWGEQDPATWA 191
Query: 255 GKVGNSWRTTGDINDTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAH 314
+VGNSWRTTGDI+D + S SI + YA G WNDPDMLEVGNGGM+ QEY AH
Sbjct: 192 PEVGNSWRTTGDISDNYDSFLSILEQQVGLEKYAHRGAWNDPDMLEVGNGGMTTQEYEAH 251
Query: 315 FSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVYVSGTDNCLQVW 374
F++WAL+KAPLLIGCDV NM+ +TF ILSN+E+IA+NQDPLG+QGR+V TD Q+W
Sbjct: 252 FALWALLKAPLLIGCDVNNMSPDTFRILSNQEIIAINQDPLGIQGRRVLK--TDQ-YQLW 308
Query: 375 VGPLSGHRLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQ 434
+G + + V L+N + ++ ++ +G+ + +RDL++H+ + G +SF
Sbjct: 309 IGTIVDG-IAVILFNTSSQDSDLSFTFEQIGITG--QAIIRDLYKHQDL-GKFSNSFSTN 364
Query: 435 VDAH 438
V H
Sbjct: 365 VPTH 368
|
|
| UNIPROTKB|Q23DW6 TTHERM_00043770 "Alpha-galactosidase, putative" [Tetrahymena thermophila SB210 (taxid:312017)] | Back alignment and assigned GO terms |
|---|
Score = 1070 (381.7 bits), Expect = 3.0e-108, P = 3.0e-108
Identities = 204/357 (57%), Positives = 253/357 (70%)
Query: 83 LNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRD 142
L+NGLA TP MGWNSWN FACNI+E +IK TAD +V++GLA LGY+++N+DDCW RD
Sbjct: 20 LDNGLAKTPAMGWNSWNHFACNINEDLIKATADQIVNSGLAALGYNYINLDDCWQIS-RD 78
Query: 143 LKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEKDDAPLFAS 202
G +V D FPSGIKALADYVH KGLK G+YSDAG FTCQ RPGSL +E DA +A
Sbjct: 79 ADGYIVEDKEKFPSGIKALADYVHSKGLKFGLYSDAGEFTCQKRPGSLGYEVKDAQRYAE 138
Query: 203 WGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSWR 262
W VDYLKYDNCFN I PK RYPPMRDALN TG I++S+CEWG +PA WA +VGNSWR
Sbjct: 139 WEVDYLKYDNCFNKNINPKIRYPPMRDALNATGRPIYFSMCEWGQYNPATWAPEVGNSWR 198
Query: 263 TTGDINDTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALMK 322
TTGDI D ++S SI + YA PG WNDPDMLEVGNGGM+ EY AHF++WAL+K
Sbjct: 199 TTGDIKDRYSSFLSILEKQVGLEKYAHPGAWNDPDMLEVGNGGMTTHEYEAHFALWALLK 258
Query: 323 APLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVYVSGTDN-CLQVWVGPLSGH 381
APLLIGCDV M+ +T IL+NKE+IA+NQDPLG+QG +V SG Q+W+G L
Sbjct: 259 APLLIGCDVSKMSEDTIRILTNKEIIAINQDPLGIQGHRVKKSGFWFWSWQLWMGQLEDG 318
Query: 382 RLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQVDAH 438
+ + L+N ++ + +G+ ++RDL+QH+ + G +SF A V H
Sbjct: 319 -VAIILFNTSAWERNLSFTFKEVGIVGPA--TIRDLYQHEDL-GVFSNSFSAIVPKH 371
|
|
| UNIPROTKB|Q9S2C9 Q9S2C9 "Probable secreted alpha-galactosidase" [Streptomyces coelicolor A3(2) (taxid:100226)] | Back alignment and assigned GO terms |
|---|
Score = 946 (338.1 bits), Expect = 4.2e-95, P = 4.2e-95
Identities = 190/358 (53%), Positives = 232/358 (64%)
Query: 87 LASTPQMGWNSWNFFACN--ISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLK 144
LA TP MG+N+WN C +E+++K AD V GL + GY++VN+DDCW+ P RD
Sbjct: 54 LALTPPMGFNNWNSTHCRDEFNESMVKGIADLFVERGLKDAGYEYVNLDDCWALPERDAD 113
Query: 145 GQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVR--PGSLFHEKDDAPLFAS 202
G+LVPD FP+GI+A+ADYVH KGLK GIY+ AG TC PG+L HE DA FA
Sbjct: 114 GRLVPDPKRFPNGIEAVADYVHSKGLKFGIYTSAGTKTCSSIGFPGALGHEYSDARQFAD 173
Query: 203 WGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSWR 262
WGVDYLKYDNC N G++ K+RY MRDAL TG I YS+CEWG + P WAG +G WR
Sbjct: 174 WGVDYLKYDNCNNQGVDAKQRYTTMRDALAATGRPIVYSICEWGENKPWEWAGDLGQLWR 233
Query: 263 TTGDINDTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALMK 322
TTGDIND+W SM+SI N + A YA PGGWNDPDMLEVGNGGM+ EYR HFS+W++M
Sbjct: 234 TTGDINDSWGSMSSIMKSNLELAEYARPGGWNDPDMLEVGNGGMTDTEYRTHFSMWSIMA 293
Query: 323 APLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVYVSGTDNCLQVWV--GPLSG 380
APLLIG D+R FEIL+N EVIAV+QDPLG QG V G WV L+
Sbjct: 294 APLLIGTDLRTAPESAFEILTNDEVIAVDQDPLGKQGEVVSSEGGR-----WVVSKELAD 348
Query: 381 HRLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQVDAH 438
VAL+N +A+ I A+GL S ++RDLW+H + A V AH
Sbjct: 349 GSRAVALFNEGSRAQRIETTAKAVGLPKSRGYTMRDLWKHSDT--NTTGRIAATVPAH 404
|
|
| DICTYBASE|DDB_G0271490 melA "putative alpha-galactosidase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 917 (327.9 bits), Expect = 5.0e-92, P = 5.0e-92
Identities = 178/367 (48%), Positives = 235/367 (64%)
Query: 83 LNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRD 142
L+NGLA TPQMGW+SWNF+ACNI+E++I TA A+VS G+A+ GY +VNIDDCW+ R
Sbjct: 20 LDNGLALTPQMGWSSWNFYACNINESVIMNTAKAMVSNGMADAGYTYVNIDDCWAGG-RY 78
Query: 143 LKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEKDDAPLFAS 202
G + D FP+GIK +ADY+H GLK+GIY+DAG TCQ R GS +E +DA +A
Sbjct: 79 PNGTVYADPTNFPNGIKYVADYIHSLGLKIGIYTDAGTETCQKRVGSYGYEANDAQTYAE 138
Query: 203 WGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSWR 262
WG+DY+K D C+ P++RY M ALN TG +F+SLC+WG ++P + VGNSWR
Sbjct: 139 WGIDYVKEDWCYATLENPQQRYQIMSQALNATGRPMFFSLCDWGYENPWTFGMSVGNSWR 198
Query: 263 TTGDINDTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALMK 322
TT DI D W SM S S++G GG+NDPDM+ VGNGGMS EY +HFS+W+L+
Sbjct: 199 TTPDIKDNWDSMLSNLMAQAPITSFSGIGGFNDPDMMMVGNGGMSNTEYVSHFSLWSLLN 258
Query: 323 APLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVYVSGTDNCLQVWVGPLSGHR 382
APL+ GCD+ ++ ET IL+ EVIA+NQDPLGVQG V S Q+W PLS
Sbjct: 259 APLIAGCDLIDIDQETLSILTASEVIAINQDPLGVQGSLVK-SYNGGLQQIWAKPLSNGA 317
Query: 383 LVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQ--VDAHDC 440
V L+N TI W + +E S ++S+R+LW + G S+ + + H C
Sbjct: 318 RAVVLFNTDTNPATIELLWGNIWMEPSQQLSIRNLWTQTNL-GTFTESYESDSLIPPHGC 376
Query: 441 QMYIFTP 447
M TP
Sbjct: 377 IMLTLTP 383
|
|
| UNIPROTKB|B3PGJ1 agaA "Alpha-galactosidase A" [Cellvibrio japonicus Ueda107 (taxid:498211)] | Back alignment and assigned GO terms |
|---|
Score = 835 (299.0 bits), Expect = 2.4e-83, P = 2.4e-83
Identities = 180/384 (46%), Positives = 233/384 (60%)
Query: 87 LASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQ 146
LA TPQMGWNSWN F CN+ E +I+ ADA+V++G+ GY+++NIDDCW RD G
Sbjct: 29 LAKTPQMGWNSWNTFGCNVDEKMIRAMADAMVTSGMKAAGYEYINIDDCWHGE-RDKNGF 87
Query: 147 LVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEKDDAPLFASWGVD 206
+ D FPSG+KALADYVH KGLKLGIYSDAG TC RPGS HE DA +ASWG+D
Sbjct: 88 IQADKKHFPSGMKALADYVHAKGLKLGIYSDAGNTTCAGRPGSRGHEYQDALTYASWGID 147
Query: 207 YLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSWRTTGD 266
Y+KYD C I PK Y MRDA+++ G + +S+CEWG + P WA VG+SWRTTGD
Sbjct: 148 YVKYDWCDTQDINPKSAYATMRDAIHKAGRPMLFSICEWGDNQPWEWAQDVGHSWRTTGD 207
Query: 267 INDTW------ASMTS--IADINDKWAS---YAGPGGWNDPDMLEVGNGGMSYQEYRAHF 315
I W S +S + I DK A YAGPG WND DM+EVGNG M+ +E RAHF
Sbjct: 208 IYPCWNCEHNHGSWSSFGVLPILDKQAGLRKYAGPGHWNDMDMMEVGNG-MTEEEDRAHF 266
Query: 316 SIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVYVSGTDNCLQVWV 375
S+WA M +PL+ G D+RNM+ T IL++KE IA+NQD LG+Q K ++ D L++++
Sbjct: 267 SLWAFMASPLIAGNDLRNMSDTTRAILTHKETIAINQDKLGIQAMK-WIDEGD--LEIYI 323
Query: 376 GPLS-GHRLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQV----------T 424
PL GH V+ L NR A W ++ +S +++ KQ T
Sbjct: 324 KPLEKGHYAVLFL-NRADDAMDYRFDWSFHYMKDD--ISKHEIFFDKQAFNWRNIWNGET 380
Query: 425 GDAVSSFGAQVDAHDCQMYIFTPR 448
G +V AH + +PR
Sbjct: 381 GSTKEVLNIKVPAHGVVVLRLSPR 404
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q90744 | NAGAB_CHICK | 3, ., 2, ., 1, ., 4, 9 | 0.4030 | 0.8021 | 0.9012 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| gw1.XIX.1583.1 | alpha-galactosidase (380 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| gw1.X.2350.1 | hypothetical protein (442 aa) | • | • | 0.916 | |||||||
| gw1.148.154.1 | hypothetical protein (545 aa) | • | • | 0.915 | |||||||
| estExt_Genewise1_v1.C_LG_VIII1629 | hypothetical protein (458 aa) | • | • | 0.915 | |||||||
| gw1.44.267.1 | hypothetical protein (643 aa) | • | 0.912 | ||||||||
| fgenesh4_pm.C_LG_IV000085 | hypothetical protein (379 aa) | • | • | • | 0.902 | ||||||
| gw1.X.3030.1 | alpha-galactosidase (EC-2.4.1.67) (369 aa) | • | • | • | 0.902 | ||||||
| eugene3.00101110 | alpha-galactosidase (EC-3.2.1.22) (386 aa) | • | • | • | 0.902 | ||||||
| fgenesh4_pg.C_scaffold_164000005 | alpha-galactosidase (EC-3.2.1.22) (367 aa) | • | • | • | 0.902 | ||||||
| gw1.VI.1302.1 | galactokinase (EC-2.7.1.6) (413 aa) | • | 0.899 | ||||||||
| fgenesh4_pm.C_scaffold_152000030 | 1,2-diacylglycerol 3-beta-galactosyltransferase (EC-2.4.1.46) (411 aa) | • | 0.899 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 455 | |||
| PLN02229 | 427 | PLN02229, PLN02229, alpha-galactosidase | 0.0 | |
| PLN02808 | 386 | PLN02808, PLN02808, alpha-galactosidase | 0.0 | |
| PLN02692 | 412 | PLN02692, PLN02692, alpha-galactosidase | 0.0 | |
| PLN03231 | 357 | PLN03231, PLN03231, putative alpha-galactosidase; | 1e-24 | |
| pfam02065 | 395 | pfam02065, Melibiase, Melibiase | 2e-23 | |
| PLN02899 | 633 | PLN02899, PLN02899, alpha-galactosidase | 1e-21 | |
| COG3345 | 687 | COG3345, GalA, Alpha-galactosidase [Carbohydrate t | 3e-04 |
| >gnl|CDD|177874 PLN02229, PLN02229, alpha-galactosidase | Back alignment and domain information |
|---|
Score = 772 bits (1994), Expect = 0.0
Identities = 332/422 (78%), Positives = 364/422 (86%), Gaps = 8/422 (1%)
Query: 34 LVLSLIIDVGFAGRVVVPLLQSYEKASYSRGFSRNFGKIFDTSNYGILQLNNGLASTPQM 93
L LS+++ AGRV PLLQS FS++F I+DTS YG LQLNNGLA TPQM
Sbjct: 14 LSLSVLVSQSIAGRVKAPLLQSV--------FSKSFNSIYDTSMYGRLQLNNGLARTPQM 65
Query: 94 GWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTIT 153
GWNSWNFFACNI+ET+IKETADALVSTGLA+LGY HVNIDDCWS+ RD KGQLVPD T
Sbjct: 66 GWNSWNFFACNINETVIKETADALVSTGLADLGYIHVNIDDCWSNLKRDSKGQLVPDPKT 125
Query: 154 FPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEKDDAPLFASWGVDYLKYDNC 213
FPSGIK LADYVH KGLKLGIYSDAGVFTCQVRPGSLFHE DDA +FASWGVDYLKYDNC
Sbjct: 126 FPSGIKLLADYVHSKGLKLGIYSDAGVFTCQVRPGSLFHEVDDADIFASWGVDYLKYDNC 185
Query: 214 FNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDTWAS 273
+NLGI+P +RYPPMRDALN TG SIFYSLCEWGVDDPALWAGKVGNSWRTT DINDTWAS
Sbjct: 186 YNLGIKPIERYPPMRDALNATGRSIFYSLCEWGVDDPALWAGKVGNSWRTTDDINDTWAS 245
Query: 274 MTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALMKAPLLIGCDVRN 333
MT+IAD+N+KWA+YAGPGGWNDPDMLEVGNGGM+Y+EYR HFSIWALMKAPLLIGCDVRN
Sbjct: 246 MTTIADLNNKWAAYAGPGGWNDPDMLEVGNGGMTYEEYRGHFSIWALMKAPLLIGCDVRN 305
Query: 334 MTAETFEILSNKEVIAVNQDPLGVQGRKVYVSGTDNCLQVWVGPLSGHRLVVALWNRCPK 393
MTAET EILSNKEVIAVNQDPLGVQGRK+ +G + C QVW GPLSG RLVVALWNRC +
Sbjct: 306 MTAETMEILSNKEVIAVNQDPLGVQGRKIQANGKNGCQQVWAGPLSGDRLVVALWNRCSE 365
Query: 394 AETITAQWDALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQVDAHDCQMYIFTPRTVTRS 453
TITA WD +GLESS VSVRDLW+HK ++ + V SFGAQVDAHDC MYIFTP+TV+ S
Sbjct: 366 PATITASWDVIGLESSISVSVRDLWKHKDLSENVVGSFGAQVDAHDCHMYIFTPQTVSHS 425
Query: 454 VI 455
+
Sbjct: 426 DV 427
|
Length = 427 |
| >gnl|CDD|166449 PLN02808, PLN02808, alpha-galactosidase | Back alignment and domain information |
|---|
Score = 563 bits (1453), Expect = 0.0
Identities = 242/367 (65%), Positives = 280/367 (76%), Gaps = 5/367 (1%)
Query: 83 LNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRD 142
L+NGL TPQMGWNSWN F CNI+ET+IK+TADA+VS+GLA LGY ++N+DDCW+ RD
Sbjct: 24 LDNGLGLTPQMGWNSWNHFQCNINETLIKQTADAMVSSGLAALGYKYINLDDCWAELKRD 83
Query: 143 LKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTC-QVRPGSLFHEKDDAPLFA 201
+G LVP TFPSGIKALADYVH KGLKLGIYSDAG TC + PGSL HE+ DA FA
Sbjct: 84 SQGNLVPKASTFPSGIKALADYVHSKGLKLGIYSDAGTLTCSKTMPGSLGHEEQDAKTFA 143
Query: 202 SWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSW 261
SWG+DYLKYDNC N G P++RYP M AL +G IF+SLCEWG +DPA WAG +GNSW
Sbjct: 144 SWGIDYLKYDNCENTGTSPQERYPKMSKALLNSGRPIFFSLCEWGQEDPATWAGDIGNSW 203
Query: 262 RTTGDINDTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALM 321
RTTGDI D W SMTS AD ND+WASYA PGGWNDPDMLEVGNGGM+ +EYR+HFSIWAL
Sbjct: 204 RTTGDIQDNWDSMTSRADQNDRWASYARPGGWNDPDMLEVGNGGMTTEEYRSHFSIWALA 263
Query: 322 KAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVYVSGTDNCLQVWVGPLSGH 381
KAPLLIGCD+R+M ETFE+LSNKEVIAVNQD LGVQG+KV G L+VW GPLS
Sbjct: 264 KAPLLIGCDIRSMDNETFELLSNKEVIAVNQDKLGVQGKKVKKDGD---LEVWAGPLSKK 320
Query: 382 RLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQVDAHDCQ 441
R+ V LWNR TITA+W +GL SS V+ RDLW H + A V++H C+
Sbjct: 321 RVAVVLWNRGSSRATITARWSDIGLNSSAVVNARDLWAHSTQSS-VKGQLSALVESHACK 379
Query: 442 MYIFTPR 448
MY+ TPR
Sbjct: 380 MYVLTPR 386
|
Length = 386 |
| >gnl|CDD|178295 PLN02692, PLN02692, alpha-galactosidase | Back alignment and domain information |
|---|
Score = 521 bits (1344), Expect = 0.0
Identities = 241/388 (62%), Positives = 283/388 (72%), Gaps = 9/388 (2%)
Query: 64 GFSRNFGKIFDTSNYGILQ---LNNGLASTPQMGWNSWNFFACNISETIIKETADALVST 120
S N + D S IL+ L NGL TP MGWNSWN F+C I E +IKETADALVST
Sbjct: 28 SRSVNNKEFDDDSE--ILRRNLLANGLGITPPMGWNSWNHFSCKIDEKMIKETADALVST 85
Query: 121 GLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGV 180
GL++LGY +VNIDDCW+ RD KG LVP TFPSGIKALADYVH KGLKLGIYSDAG
Sbjct: 86 GLSKLGYTYVNIDDCWAEIARDEKGNLVPKKSTFPSGIKALADYVHSKGLKLGIYSDAGY 145
Query: 181 FTC-QVRPGSLFHEKDDAPLFASWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIF 239
FTC + PGSL HE+ DA FASWG+DYLKYDNC N G +P RYP M AL + G IF
Sbjct: 146 FTCSKTMPGSLGHEEQDAKTFASWGIDYLKYDNCNNDGSKPTVRYPVMTRALMKAGRPIF 205
Query: 240 YSLCEWGVDDPALWAGKVGNSWRTTGDINDTWASMTSIADINDKWASYAGPGGWNDPDML 299
+SLCEWG PALW KVGNSWRTT DI+DTW SM S AD+N+ +A A PGGWNDPDML
Sbjct: 206 FSLCEWGDMHPALWGSKVGNSWRTTNDISDTWDSMISRADMNEVYAELARPGGWNDPDML 265
Query: 300 EVGNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQG 359
EVGNGGM+ EY HFSIWA+ KAPLL+GCDVRNMT ET +I++NKEVIAVNQDPLGVQ
Sbjct: 266 EVGNGGMTKDEYIVHFSIWAISKAPLLLGCDVRNMTKETMDIVANKEVIAVNQDPLGVQA 325
Query: 360 RKVYVSGTDNCLQVWVGPLSGHRLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQ 419
+KV + G L++W GPLSG+R+ + L NR P +ITA WD +G+ +++ V RDLW+
Sbjct: 326 KKVRMEGD---LEIWAGPLSGYRVALLLLNRGPWRNSITANWDDIGIPANSIVEARDLWE 382
Query: 420 HKQVTGDAVSSFGAQVDAHDCQMYIFTP 447
HK + V + A VD+H C+MYI P
Sbjct: 383 HKTLKQHFVGNLTATVDSHACKMYILKP 410
|
Length = 412 |
| >gnl|CDD|178770 PLN03231, PLN03231, putative alpha-galactosidase; Provisional | Back alignment and domain information |
|---|
Score = 104 bits (260), Expect = 1e-24
Identities = 96/352 (27%), Positives = 140/352 (39%), Gaps = 87/352 (24%)
Query: 91 PQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLR--------- 141
P GWNS++ F+ ISE E A +VS L GY++V ID W L+
Sbjct: 1 PPRGWNSYDSFSFTISEEQFLENAK-IVSETLKPHGYEYVVIDYLWYRKLKHGWFKTSAK 59
Query: 142 -------DLKGQLVPDTITFPS-----GIKALADYVHGKGLKLGIYSDAGVFTCQVRP-- 187
D G+ +PD +PS G +A VH GLKLGI+ G+ T V+
Sbjct: 60 SPGYDLIDKWGRPLPDPKRWPSTTGGKGFAPIAAKVHALGLKLGIHVMRGISTTAVKKKT 119
Query: 188 ---------GSLFHEKDDAPL-------------------------------FASWGVDY 207
G ++ KD A + +ASWG+D+
Sbjct: 120 PILGAFKSNGHAWNAKDIALMDQACPWMQQCFVGVNTSSEGGKLFIQSLYDQYASWGIDF 179
Query: 208 LKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWA--GKVGNSWRTTG 265
+K+D F + A+ +G + YSL P L A ++ N +R TG
Sbjct: 180 IKHDCVFGAENPQLDEILTVSKAIRNSGRPMIYSLSPGDGATPGLAARVAQLVNMYRVTG 239
Query: 266 DINDTWASMTSIADINDKWA--------SYAGPGGWNDPDMLEVG---NGGMSYQEYRA- 313
D D W + D+ +A S G W D DML G + +Y YR
Sbjct: 240 DDWDDWKYLVKHFDVARDFAAAGLIAIPSVVGGKSWVDLDMLPFGRLTDPAAAYGPYRNS 299
Query: 314 ---------HFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLG 356
++WA+ K+PL+ G D+R + ET +L+N V+ VN G
Sbjct: 300 RLSLEEKKTQMTLWAVAKSPLMFGGDLRRLDNETLSLLTNPTVLEVNSHSTG 351
|
Length = 357 |
| >gnl|CDD|216861 pfam02065, Melibiase, Melibiase | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 2e-23
Identities = 40/204 (19%), Positives = 67/204 (32%), Gaps = 51/204 (25%)
Query: 89 STPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQL- 147
+ N+W + +E + + AD A+LG + +DD W D L
Sbjct: 39 KERPVLLNNWEATYFDFNEDKLLDLADEA-----ADLGIELFVLDDGWFGGRNDDNSSLG 93
Query: 148 --VPDTITFPSGIKALADYVHGKGLKLGIYSD-----AGVFTCQVRPGSLFHEKD----- 195
+ FP+G+K LAD+VH G++ G++ + + P + H
Sbjct: 94 DWFVNEQKFPNGLKHLADHVHSLGMEFGLWFEPEMVSPDSDLYRAHPDWVLHVPGRSPSL 153
Query: 196 ---------------------DAPLFASWGVDYLKYDNCFNLGIEPKKRYPP-------- 226
L A+ +DY+K+D NL R P
Sbjct: 154 GRNQLVLDLSNPDVVDYIYEEMDQLLANNPIDYIKWDMNRNLTEIGSPRLPAEAYHRYIL 213
Query: 227 ----MRDALNETGCSIFYSLCEWG 246
+ D L + + C G
Sbjct: 214 GLYRLFDRLTTAFPHVLFESCSSG 237
|
Length = 395 |
| >gnl|CDD|178487 PLN02899, PLN02899, alpha-galactosidase | Back alignment and domain information |
|---|
Score = 97.2 bits (242), Expect = 1e-21
Identities = 88/356 (24%), Positives = 144/356 (40%), Gaps = 91/356 (25%)
Query: 84 NNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCW------- 136
LAS P GWNS++ F+ +SE + A+ +VS L GY++V +D W
Sbjct: 24 QQQLASFPPRGWNSYDSFSWIVSEEEFLQNAE-IVSQRLLPFGYEYVVVDYLWYRKKVEG 82
Query: 137 ---SSPLRDLK---GQLVPDTITFPS-----GIKALADYVHGKGLKLGIYSDAGVFTCQV 185
S D+ G+ +PD +PS G +A+ VH GLK GI+ G+ T V
Sbjct: 83 AYVDSLGFDVIDEWGRPIPDPGRWPSSRGGKGFTEVAEKVHAMGLKFGIHVMRGISTQAV 142
Query: 186 RPGSLF--------HEKDDAPLFA------------------------------------ 201
+ +E+ A
Sbjct: 143 NANTPILDAVKGGAYEESGRQWRAKDIALKERACAWMSHGFMSVNTKLGAGKAFLRSLYD 202
Query: 202 ---SWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVG 258
WGVD++K+D F + ++ + + L E I YSL P + A +V
Sbjct: 203 QYAEWGVDFVKHDCVFGDDFDLEE-ITYVSEVLKELDRPIVYSLSPGTSATPTM-AKEVS 260
Query: 259 ---NSWRTTGDINDTWASMTSIADINDKW--ASYAGPGG-----WNDPDMLEVG---NGG 305
N +R TGD DTW + + D++ + A G G W D DML +G + G
Sbjct: 261 GLVNMYRITGDDWDTWGDVAAHFDVSRDFAAAGLIGAKGLRGRSWPDLDMLPLGWLTDPG 320
Query: 306 ----------MSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVN 351
++ E + ++WA+ K+PL+ G D+R + T+ +++N ++ +N
Sbjct: 321 SNVGPHRACNLTLDEQKTQMTLWAMAKSPLMYGGDLRKLDQATYSLITNPTLLEIN 376
|
Length = 633 |
| >gnl|CDD|225882 COG3345, GalA, Alpha-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 42.9 bits (101), Expect = 3e-04
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 93 MGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCW----SSPLRDLKGQLV 148
+GWNSW + + +E I E + G + +DD W + L+ L LV
Sbjct: 294 IGWNSWEAYYFDFTEEEILENVKEA-----KKFGVELFVLDDGWFGGRNDDLKSLGDWLV 348
Query: 149 PDTITFPSGIKALADYVHGKGLKLGIY 175
FPSGI+ L + + GL GI+
Sbjct: 349 NSE-KFPSGIEELIEAIAENGLIFGIW 374
|
Length = 687 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 455 | |||
| PLN02229 | 427 | alpha-galactosidase | 100.0 | |
| PLN02808 | 386 | alpha-galactosidase | 100.0 | |
| PLN02692 | 412 | alpha-galactosidase | 100.0 | |
| KOG2366 | 414 | consensus Alpha-D-galactosidase (melibiase) [Carbo | 100.0 | |
| PLN02899 | 633 | alpha-galactosidase | 100.0 | |
| PLN03231 | 357 | putative alpha-galactosidase; Provisional | 100.0 | |
| PF02065 | 394 | Melibiase: Melibiase; InterPro: IPR000111 O-Glycos | 100.0 | |
| COG3345 | 687 | GalA Alpha-galactosidase [Carbohydrate transport a | 100.0 | |
| PLN02219 | 775 | probable galactinol--sucrose galactosyltransferase | 99.94 | |
| PLN02355 | 758 | probable galactinol--sucrose galactosyltransferase | 99.94 | |
| PLN02684 | 750 | Probable galactinol--sucrose galactosyltransferase | 99.92 | |
| PF05691 | 747 | Raffinose_syn: Raffinose synthase or seed imbibiti | 99.91 | |
| PLN02711 | 777 | Probable galactinol--sucrose galactosyltransferase | 99.91 | |
| PLN02982 | 865 | galactinol-raffinose galactosyltransferase/ghydrol | 99.81 | |
| cd06592 | 303 | GH31_glucosidase_KIAA1161 KIAA1161 is an uncharact | 99.73 | |
| cd06593 | 308 | GH31_xylosidase_YicI YicI alpha-xylosidase is a gl | 99.45 | |
| cd06589 | 265 | GH31 The enzymes of glycosyl hydrolase family 31 ( | 99.3 | |
| PF10566 | 273 | Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: | 99.24 | |
| cd06599 | 317 | GH31_glycosidase_Aec37 Glycosyl hydrolase family 3 | 99.21 | |
| cd06598 | 317 | GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide | 99.13 | |
| cd06604 | 339 | GH31_glucosidase_II_MalA Alpha-glucosidase II (alp | 99.12 | |
| PRK10658 | 665 | putative alpha-glucosidase; Provisional | 99.07 | |
| cd06601 | 332 | GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) | 99.07 | |
| cd06595 | 292 | GH31_xylosidase_XylS-like This family represents a | 99.06 | |
| cd06591 | 319 | GH31_xylosidase_XylS XylS is a glycosyl hydrolase | 99.06 | |
| cd06600 | 317 | GH31_MGAM-like This family includes the following | 99.03 | |
| cd06602 | 339 | GH31_MGAM_SI_GAA This family includes the followin | 99.02 | |
| PF01055 | 441 | Glyco_hydro_31: Glycosyl hydrolases family 31 ; In | 98.99 | |
| cd06597 | 340 | GH31_transferase_CtsY CtsY (cyclic tetrasaccharide | 98.96 | |
| cd06594 | 317 | GH31_glucosidase_YihQ YihQ is a bacterial alpha-gl | 98.94 | |
| cd06603 | 339 | GH31_GANC_GANAB_alpha This family includes the clo | 98.92 | |
| COG1501 | 772 | Alpha-glucosidases, family 31 of glycosyl hydrolas | 98.92 | |
| PLN02763 | 978 | hydrolase, hydrolyzing O-glycosyl compounds | 98.7 | |
| PRK10426 | 635 | alpha-glucosidase; Provisional | 98.61 | |
| KOG1065 | 805 | consensus Maltase glucoamylase and related hydrola | 97.84 | |
| TIGR02456 | 539 | treS_nterm trehalose synthase. Trehalose synthase | 97.24 | |
| cd06596 | 261 | GH31_CPE1046 CPE1046 is an uncharacterized Clostri | 97.03 | |
| PRK10785 | 598 | maltodextrin glucosidase; Provisional | 96.55 | |
| PRK14706 | 639 | glycogen branching enzyme; Provisional | 96.23 | |
| PRK09441 | 479 | cytoplasmic alpha-amylase; Reviewed | 95.95 | |
| PRK12313 | 633 | glycogen branching enzyme; Provisional | 95.26 | |
| PF02638 | 311 | DUF187: Glycosyl hydrolase like GH101; InterPro: I | 94.42 | |
| PRK12568 | 730 | glycogen branching enzyme; Provisional | 94.32 | |
| PF02806 | 95 | Alpha-amylase_C: Alpha amylase, C-terminal all-bet | 94.03 | |
| TIGR01515 | 613 | branching_enzym alpha-1,4-glucan:alpha-1,4-glucan | 93.65 | |
| PRK14705 | 1224 | glycogen branching enzyme; Provisional | 93.34 | |
| PF13200 | 316 | DUF4015: Putative glycosyl hydrolase domain | 92.69 | |
| PF08533 | 58 | Glyco_hydro_42C: Beta-galactosidase C-terminal dom | 92.65 | |
| PRK05402 | 726 | glycogen branching enzyme; Provisional | 91.17 | |
| PF01120 | 346 | Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR00 | 90.75 | |
| smart00812 | 384 | Alpha_L_fucos Alpha-L-fucosidase. O-Glycosyl hydro | 90.47 | |
| PF14509 | 103 | GH97_C: Glycosyl-hydrolase 97 C-terminal, oligomer | 87.8 | |
| PF09260 | 91 | DUF1966: Domain of unknown function (DUF1966); Int | 85.62 | |
| PF11941 | 89 | DUF3459: Domain of unknown function (DUF3459); Int | 84.59 | |
| PF10438 | 78 | Cyc-maltodext_C: Cyclo-malto-dextrinase C-terminal | 84.54 | |
| TIGR02104 | 605 | pulA_typeI pullulanase, type I. Pullulan is an unu | 81.87 |
| >PLN02229 alpha-galactosidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-107 Score=833.97 Aligned_cols=416 Identities=80% Similarity=1.359 Sum_probs=382.0
Q ss_pred eeehhhcccccccccccccccccceEEEEecchhhHHHHHHHhhcccccccccCCCCCCCceEEechhhhCcCCCHHHHH
Q 012852 32 FALVLSLIIDVGFAGRVVVPLLQSYEKASYSRGFSRNFGKIFDTSNYGILQLNNGLASTPQMGWNSWNFFACNISETIIK 111 (455)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~pP~gwnSW~~~~~~i~e~~i~ 111 (455)
+.|+++.+.|+..+.........+. -++.+-..+.........++|+++++||||||||+.|+|+|||+.|+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~ngla~tPpmGWnSWn~~~~~i~E~~i~ 83 (427)
T PLN02229 12 LLLSLSVLVSQSIAGRVKAPLLQSV--------FSKSFNSIYDTSMYGRLQLNNGLARTPQMGWNSWNFFACNINETVIK 83 (427)
T ss_pred HHHHHHhhcchhhhhhhcccccccc--------chhhhhhhhhhhhhhhhhccCCccCCCCceEEchhhhCcccCHHHHH
Confidence 4455666688887777766333332 23455555555444556678999999999999999999999999999
Q ss_pred HHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCcccCCCCCCCCHHHHHHHHHhcCCeEEEEecCCccccCCCCcccc
Q 012852 112 ETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLF 191 (455)
Q Consensus 112 ~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~~~d~~~FP~Gl~~l~~~v~~~G~k~Glw~~pg~~~c~~~Pg~~~ 191 (455)
++||++++.||+++||+||+|||||+...||++|+|++|++|||+|||+|+||||++|||||||.++|+.+|..+||+++
T Consensus 84 ~~ad~~v~~Gl~~~Gy~yv~iDDgW~~~~rd~~G~l~~d~~rFP~G~k~ladyiH~~GlKfGIy~d~G~~TC~~~pGS~g 163 (427)
T PLN02229 84 ETADALVSTGLADLGYIHVNIDDCWSNLKRDSKGQLVPDPKTFPSGIKLLADYVHSKGLKLGIYSDAGVFTCQVRPGSLF 163 (427)
T ss_pred HHHHHHHHhHHHhCCCEEEEEcCCcCCCCcCCCCCEEEChhhcCCcHHHHHHHHHHCCCceEEeccCCCcccCCCCCCcc
Confidence 99999999999999999999999999878999999999999999999999999999999999999999999999999999
Q ss_pred cHHhHHHHHHhcCCcEEEeecCCCCCCCccchhHHHHHHHHhcCCCeeEeeCCCCCCChhhhhhhccCeeeecCCCCCCh
Q 012852 192 HEKDDAPLFASWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDTW 271 (455)
Q Consensus 192 ~~~~~~~~~~~wGidylK~D~~~~~~~~~~~~y~~m~~AL~~~G~~i~~~~c~~g~~~p~~w~~~~~~~~Ris~Di~~~W 271 (455)
|+++++++|++|||||||+|+|+.....+.++|..|++||+++||||+||+|+||...|+.|..+++|+||+++||.+.|
T Consensus 164 ~e~~DA~~fA~WGVDylK~D~C~~~~~~~~~~y~~m~~AL~~tGRpI~~SlC~WG~~~p~~w~~~~~n~WR~s~DI~d~W 243 (427)
T PLN02229 164 HEVDDADIFASWGVDYLKYDNCYNLGIKPIERYPPMRDALNATGRSIFYSLCEWGVDDPALWAGKVGNSWRTTDDINDTW 243 (427)
T ss_pred HHHHHHHHHHHcCCCEEEecCCCCCCcchhHHHHHHHHHHHhhCCCcEEEecCCCCCCHHHHHHhhcCeeeccCCccccc
Confidence 99999999999999999999998877778899999999999999999999999999889999999999999999999999
Q ss_pred hHHHHHHHhhcccccccCCCCcCCCCccccCCCCCCHHHHHHHHHHHHHHhCceeecCCCCCCCHHHHHhhccHhHHhhc
Q 012852 272 ASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVN 351 (455)
Q Consensus 272 ~~~~~~~~~~~~~~~~~g~g~~nDpDmL~vg~~~lT~~E~rt~~slwa~~gsPL~is~Dl~~l~~~~~~lL~N~e~iain 351 (455)
+++.++++.+..|+.+++||+|||||||+||+.+||.+|+||||+||||++|||++|+||+++++++++||+|+||||||
T Consensus 244 ~sv~~i~~~~~~~~~~agPG~wnDpDML~vGn~glT~~E~rthfsLWai~~SPLiiG~DL~~m~~~tl~ILtNkEVIAIN 323 (427)
T PLN02229 244 ASMTTIADLNNKWAAYAGPGGWNDPDMLEVGNGGMTYEEYRGHFSIWALMKAPLLIGCDVRNMTAETMEILSNKEVIAVN 323 (427)
T ss_pred ccHHHHHHHHHHHHhhcCCCCCCCCCeeeeCCCCCCHHHHHHHHHHHHHHhCceeecCCcccCCHHHHHHhcCHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCccEEeeecCCCCceeEEEEEcCCCcEEEEEEecCCCceeEEEEceecCCCCCCceEEEEccCCccccccccceE
Q 012852 352 QDPLGVQGRKVYVSGTDNCLQVWVGPLSGHRLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGDAVSSF 431 (455)
Q Consensus 352 Qd~lG~~~r~v~~~~~~~~~~vw~~~l~dg~~avalfN~~~~~~~iti~l~~LGL~~~~~~~vrDlW~g~~~~g~~~~~l 431 (455)
||++|++++++...+.+++.+||.+++++|+.||++||+++++++++++|++|||.+...|+|||||+|+++.+..+++|
T Consensus 324 QD~lG~qg~~v~~~~~~~~~~vW~~~L~~g~~aValfN~~~~~~~v~v~~~~lGl~~~~~~~VrDLW~~~dlg~~~~~~~ 403 (427)
T PLN02229 324 QDPLGVQGRKIQANGKNGCQQVWAGPLSGDRLVVALWNRCSEPATITASWDVIGLESSISVSVRDLWKHKDLSENVVGSF 403 (427)
T ss_pred ccccccCcEEEEecCCCCceEEEEEECCCCCEEEEEEeCCCCCEEEEEEHHHcCCCCCCceEEEECCCCCccCccccceE
Confidence 99999999999876544558999999999999999999999999999999999999877799999999999833567899
Q ss_pred EEEEcCCCEEEEEEEeCCccCCCC
Q 012852 432 GAQVDAHDCQMYIFTPRTVTRSVI 455 (455)
Q Consensus 432 ~~~L~pH~~~ll~ltp~~~~~~~~ 455 (455)
+++|+||+|+||||+|.+.++|.+
T Consensus 404 ~~~v~~Hg~~l~rl~~~~~~~~~~ 427 (427)
T PLN02229 404 GAQVDAHDCHMYIFTPQTVSHSDV 427 (427)
T ss_pred EEEECCCeEEEEEEeccccccccC
Confidence 999999999999999999998863
|
|
| >PLN02808 alpha-galactosidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-103 Score=799.28 Aligned_cols=364 Identities=66% Similarity=1.190 Sum_probs=350.3
Q ss_pred ccccCCCCCCCceEEechhhhCcCCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCcccCCCCCCCCHHH
Q 012852 81 LQLNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIKA 160 (455)
Q Consensus 81 ~~~~~~~~~~pP~gwnSW~~~~~~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~~~d~~~FP~Gl~~ 160 (455)
..+.++++++||||||||+.|+|+|||+.|+++|++|++.||+++||+||+|||||+...||++|+|+||++|||+||++
T Consensus 22 ~~~~ngla~tPpmGWnsW~~~~~~i~e~~i~~~a~~mv~~Gl~~~Gy~yv~iDd~W~~~~rd~~G~~~~d~~rFP~G~~~ 101 (386)
T PLN02808 22 NLLDNGLGLTPQMGWNSWNHFQCNINETLIKQTADAMVSSGLAALGYKYINLDDCWAELKRDSQGNLVPKASTFPSGIKA 101 (386)
T ss_pred hcccCcccCCCcceEEchHHHCCCCCHHHHHHHHHHHHHcchHHhCCEEEEEcCCcCCCCcCCCCCEeeChhhcCccHHH
Confidence 34578899999999999999999999999999999999999999999999999999998899999999999999999999
Q ss_pred HHHHHHhcCCeEEEEecCCccccC-CCCcccccHHhHHHHHHhcCCcEEEeecCCCCCCCccchhHHHHHHHHhcCCCee
Q 012852 161 LADYVHGKGLKLGIYSDAGVFTCQ-VRPGSLFHEKDDAPLFASWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIF 239 (455)
Q Consensus 161 l~~~v~~~G~k~Glw~~pg~~~c~-~~Pg~~~~~~~~~~~~~~wGidylK~D~~~~~~~~~~~~y~~m~~AL~~~G~~i~ 239 (455)
|+||||++|||||||.++|..+|. .+||+++|+++++++|++|||||||+|+|+.....+.++|..|++||+++||||+
T Consensus 102 lad~iH~~GlkfGiy~~~G~~tC~~~~pGs~~~e~~DA~~fA~WGvDylK~D~C~~~~~~~~~~y~~m~~AL~~tGRpi~ 181 (386)
T PLN02808 102 LADYVHSKGLKLGIYSDAGTLTCSKTMPGSLGHEEQDAKTFASWGIDYLKYDNCENTGTSPQERYPKMSKALLNSGRPIF 181 (386)
T ss_pred HHHHHHHCCCceEEEecCCccccCCCCCcchHHHHHHHHHHHHhCCCEEeecCcCCCCccHHHHHHHHHHHHHHhCCCeE
Confidence 999999999999999999999995 5899999999999999999999999999988766778899999999999999999
Q ss_pred EeeCCCCCCChhhhhhhccCeeeecCCCCCChhHHHHHHHhhcccccccCCCCcCCCCccccCCCCCCHHHHHHHHHHHH
Q 012852 240 YSLCEWGVDDPALWAGKVGNSWRTTGDINDTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWA 319 (455)
Q Consensus 240 ~~~c~~g~~~p~~w~~~~~~~~Ris~Di~~~W~~~~~~~~~~~~~~~~~g~g~~nDpDmL~vg~~~lT~~E~rt~~slwa 319 (455)
|++|+||...|..|..+++|+||++.||.+.|+++.++++.+..++.+++||+|||||||+||+++||.+|+||||+|||
T Consensus 182 ~slc~wg~~~p~~w~~~~~n~WR~s~Di~d~W~~v~~~~~~~~~~~~~agPG~wnDpDML~vGn~glt~~E~rthfsLWa 261 (386)
T PLN02808 182 FSLCEWGQEDPATWAGDIGNSWRTTGDIQDNWDSMTSRADQNDRWASYARPGGWNDPDMLEVGNGGMTTEEYRSHFSIWA 261 (386)
T ss_pred EEecCCCCCCHHHHHHhhcCcccccCCcccchhhHHHHHHhhhhhHhhcCCCCCCCCCeeeECCCCCCHHHHHHHHHHHH
Confidence 99999998889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCceeecCCCCCCCHHHHHhhccHhHHhhccCCCCCccEEeeecCCCCceeEEEEEcCCCcEEEEEEecCCCceeEEE
Q 012852 320 LMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVYVSGTDNCLQVWVGPLSGHRLVVALWNRCPKAETITA 399 (455)
Q Consensus 320 ~~gsPL~is~Dl~~l~~~~~~lL~N~e~iainQd~lG~~~r~v~~~~~~~~~~vw~~~l~dg~~avalfN~~~~~~~iti 399 (455)
|++|||++|+||++++++.++||+|+|+||||||++|.++++|..+++ .+||+++|++|+.||++||++++++++++
T Consensus 262 m~~SPLiiG~DL~~~~~~~l~iLtNkevIAINQD~lG~~~~~v~~~~~---~~vW~k~L~~g~~aVal~N~~~~~~~~~~ 338 (386)
T PLN02808 262 LAKAPLLIGCDIRSMDNETFELLSNKEVIAVNQDKLGVQGKKVKKDGD---LEVWAGPLSKKRVAVVLWNRGSSRATITA 338 (386)
T ss_pred HHhCcceecCCcCcCCHHHHHHhcCHHHHhhcCCccccCcEEEEecCC---eEEEEEECCCCCEEEEEEECCCCCEEEEE
Confidence 999999999999999999999999999999999999999999987665 99999999999999999999999999999
Q ss_pred EceecCCCCCCceEEEEccCCccccccccceEEEEEcCCCEEEEEEEeC
Q 012852 400 QWDALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQVDAHDCQMYIFTPR 448 (455)
Q Consensus 400 ~l~~LGL~~~~~~~vrDlW~g~~~~g~~~~~l~~~L~pH~~~ll~ltp~ 448 (455)
+|++|||.....|+|||||+|+++ +.++++++++|+||+|+||||+|.
T Consensus 339 ~~~~lgl~~~~~~~vrDlWs~~~~-g~~~~~~~~~v~pHg~~~~rlt~~ 386 (386)
T PLN02808 339 RWSDIGLNSSAVVNARDLWAHSTQ-SSVKGQLSALVESHACKMYVLTPR 386 (386)
T ss_pred EHHHhCCCCCCceEEEECCCCCcc-CcccceEEEEECCceEEEEEEeCC
Confidence 999999987678999999999998 788899999999999999999974
|
|
| >PLN02692 alpha-galactosidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-103 Score=799.48 Aligned_cols=366 Identities=64% Similarity=1.126 Sum_probs=350.2
Q ss_pred ccccCCCCCCCceEEechhhhCcCCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCcccCCCCCCCCHHH
Q 012852 81 LQLNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIKA 160 (455)
Q Consensus 81 ~~~~~~~~~~pP~gwnSW~~~~~~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~~~d~~~FP~Gl~~ 160 (455)
..+.|+++++||||||||+.|+|+|||+.++++|+++++.||+++||+||+|||||+...||++|+|++|++|||+|||+
T Consensus 46 ~~~~ngla~tPpmGWnSW~~~~~~i~E~~i~~~ad~~~~~gl~~~Gy~yv~iDDgW~~~~rd~~G~~~~d~~kFP~G~k~ 125 (412)
T PLN02692 46 NLLANGLGITPPMGWNSWNHFSCKIDEKMIKETADALVSTGLSKLGYTYVNIDDCWAEIARDEKGNLVPKKSTFPSGIKA 125 (412)
T ss_pred hcccCcCcCCCcceEEchhhhCcccCHHHHHHHHHHHHhccchhcCcEEEEEcCCcCCCCCCCCCCeeeChhhcCCcHHH
Confidence 44578999999999999999999999999999999999999999999999999999998899999999999999999999
Q ss_pred HHHHHHhcCCeEEEEecCCccccC-CCCcccccHHhHHHHHHhcCCcEEEeecCCCCCCCccchhHHHHHHHHhcCCCee
Q 012852 161 LADYVHGKGLKLGIYSDAGVFTCQ-VRPGSLFHEKDDAPLFASWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIF 239 (455)
Q Consensus 161 l~~~v~~~G~k~Glw~~pg~~~c~-~~Pg~~~~~~~~~~~~~~wGidylK~D~~~~~~~~~~~~y~~m~~AL~~~G~~i~ 239 (455)
|+||||++|||||||.++|..+|. ++||+++|++.++++|++|||||||+|+|+.....+.++|..|++||+++||||+
T Consensus 126 ladyiH~~GLKfGIy~d~G~~tC~~~~pGS~g~e~~DA~~fA~WGvDylK~D~C~~~~~~~~~~y~~m~~AL~~tGRpI~ 205 (412)
T PLN02692 126 LADYVHSKGLKLGIYSDAGYFTCSKTMPGSLGHEEQDAKTFASWGIDYLKYDNCNNDGSKPTVRYPVMTRALMKAGRPIF 205 (412)
T ss_pred HHHHHHHCCCceEEEecCCccccCCCCCCchHHHHHHHHHHHhcCCCEEeccccCCCCcchhHHHHHHHHHHHHhCCCeE
Confidence 999999999999999999999995 5899999999999999999999999999987766678999999999999999999
Q ss_pred EeeCCCCCCChhhhhhhccCeeeecCCCCCChhHHHHHHHhhcccccccCCCCcCCCCccccCCCCCCHHHHHHHHHHHH
Q 012852 240 YSLCEWGVDDPALWAGKVGNSWRTTGDINDTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWA 319 (455)
Q Consensus 240 ~~~c~~g~~~p~~w~~~~~~~~Ris~Di~~~W~~~~~~~~~~~~~~~~~g~g~~nDpDmL~vg~~~lT~~E~rt~~slwa 319 (455)
||+|+||...|+.|..+++|+||+++||.+.|+++.++++.+..++.+++||+|||||||+||+++||.+|+|+||||||
T Consensus 206 ~SlC~wg~~~p~~w~~~~~n~WR~s~DI~d~W~sv~~~~~~~~~~~~~agPG~wnDpDML~VGn~glT~~E~rThfsLWa 285 (412)
T PLN02692 206 FSLCEWGDMHPALWGSKVGNSWRTTNDISDTWDSMISRADMNEVYAELARPGGWNDPDMLEVGNGGMTKDEYIVHFSIWA 285 (412)
T ss_pred EEecCCCcCChhhhhhhcCCccccccccccchHhHHHHHHHHHHHhhccCCCCCCCCCeEeECCCCCCHHHHHHHHHHHH
Confidence 99999999899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCceeecCCCCCCCHHHHHhhccHhHHhhccCCCCCccEEeeecCCCCceeEEEEEcCCCcEEEEEEecCCCceeEEE
Q 012852 320 LMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVYVSGTDNCLQVWVGPLSGHRLVVALWNRCPKAETITA 399 (455)
Q Consensus 320 ~~gsPL~is~Dl~~l~~~~~~lL~N~e~iainQd~lG~~~r~v~~~~~~~~~~vw~~~l~dg~~avalfN~~~~~~~iti 399 (455)
|++|||++|+||+++++++++||+|+|+||||||++|.|++++...++ .+||+++|++|+.||++||+++.++++++
T Consensus 286 i~~SPLiiG~DL~~~~~~~l~iLtN~evIAiNQD~lG~q~~~v~~~~~---~~vW~k~l~~g~~aVal~N~~~~~~~i~~ 362 (412)
T PLN02692 286 ISKAPLLLGCDVRNMTKETMDIVANKEVIAVNQDPLGVQAKKVRMEGD---LEIWAGPLSGYRVALLLLNRGPWRNSITA 362 (412)
T ss_pred HHhCcceecCCcccCCHHHHHHhcCHHHhhhccCccccCcEEEEecCC---eEEEEEECCCCCEEEEEEECCCCCEEEEE
Confidence 999999999999999999999999999999999999999999987665 99999999999999999999999999999
Q ss_pred EceecCCCCCCceEEEEccCCccccccccceEEEEEcCCCEEEEEEEeCC
Q 012852 400 QWDALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQVDAHDCQMYIFTPRT 449 (455)
Q Consensus 400 ~l~~LGL~~~~~~~vrDlW~g~~~~g~~~~~l~~~L~pH~~~ll~ltp~~ 449 (455)
+|++|||..+..++|||||+|+++....+++++++|+||+|+||||+|.+
T Consensus 363 ~~~~lgl~~~~~~~vrDLW~~~~~g~~~~~~~~~~v~~Hg~~l~rl~~~~ 412 (412)
T PLN02692 363 NWDDIGIPANSIVEARDLWEHKTLKQHFVGNLTATVDSHACKMYILKPIS 412 (412)
T ss_pred eHHHhCCCCCCceEEEECCCCCccCccccceEEEEECCceEEEEEEecCC
Confidence 99999998877899999999999832578899999999999999999864
|
|
| >KOG2366 consensus Alpha-D-galactosidase (melibiase) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-88 Score=669.04 Aligned_cols=372 Identities=56% Similarity=0.971 Sum_probs=349.7
Q ss_pred cccccccccCCCCCCCceEEechhhhCcCCC----------HHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCC
Q 012852 76 SNYGILQLNNGLASTPQMGWNSWNFFACNIS----------ETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKG 145 (455)
Q Consensus 76 ~~~~~~~~~~~~~~~pP~gwnSW~~~~~~i~----------e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G 145 (455)
.......+.||++++|||||+||+.|.|+++ |..++++||+|++.|++++||+||+|||||....||.+|
T Consensus 18 ~~~~~~~l~NGLg~tP~MGw~sW~~f~cniDCv~~pd~cIsE~l~~~~ad~mvseG~~~vGY~yi~iDDCW~e~~Rd~~g 97 (414)
T KOG2366|consen 18 SVKGRMSLNNGLGRTPQMGWNSWERFRCNIDCVFGPDFCISEQLFKEMADAMVSEGLADVGYEYINIDDCWSEVTRDSDG 97 (414)
T ss_pred hhhhheeeccccccCCCcccccccceeeecccccCCccchhHHHHHHHHHHHHHhHHHhcCcEEEechhhhhhhccCCcc
Confidence 3334677899999999999999999999888 999999999999999999999999999999998899999
Q ss_pred CcccCCCCCCCCHHHHHHHHHhcCCeEEEEecCCccccCCCCcccccHHhHHHHHHhcCCcEEEeecCCCCCCCccchhH
Q 012852 146 QLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEKDDAPLFASWGVDYLKYDNCFNLGIEPKKRYP 225 (455)
Q Consensus 146 ~~~~d~~~FP~Gl~~l~~~v~~~G~k~Glw~~pg~~~c~~~Pg~~~~~~~~~~~~~~wGidylK~D~~~~~~~~~~~~y~ 225 (455)
++++|+++||+|++.|++|+|++|+|||||.+.|..||.++||++.|++.++++|++|||||+|+|.|+.......++|.
T Consensus 98 rLva~~~rFP~Gi~~ladyvHs~GLKlGiYsD~G~~TC~g~PGS~~~e~~DA~tFA~WgvDylKlD~C~~~~~~~~~~Yp 177 (414)
T KOG2366|consen 98 RLVADPSRFPSGIKALADYVHSKGLKLGIYSDAGNFTCAGYPGSLGHEESDAKTFADWGVDYLKLDGCFNNLITMPEGYP 177 (414)
T ss_pred ccccChhhcccchhhhhhchhhcCCceeeeeccCchhhccCCcccchhhhhhhhhHhhCCcEEeccccccccccccccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998888899999
Q ss_pred HHHHHHHhcCCCeeEeeCCCCCCChhhh-------hhhccCeeeecCCCCCChhHHHHHHH----hhcccccccCCCCcC
Q 012852 226 PMRDALNETGCSIFYSLCEWGVDDPALW-------AGKVGNSWRTTGDINDTWASMTSIAD----INDKWASYAGPGGWN 294 (455)
Q Consensus 226 ~m~~AL~~~G~~i~~~~c~~g~~~p~~w-------~~~~~~~~Ris~Di~~~W~~~~~~~~----~~~~~~~~~g~g~~n 294 (455)
.|++||+++||||++++|+||...++.| ...++|.||+.+||.++|.++..+++ .+..+.+++||++||
T Consensus 178 ~ms~aLN~tGrpi~ySlC~W~~~~~~~~~~pny~~i~~~~N~WR~~dDI~dtW~Sv~~I~d~~~~nqd~~~~~agPg~WN 257 (414)
T KOG2366|consen 178 IMSRALNNTGRPIFYSLCSWPAYHPGLPHHPNYKNISTICNSWRTTDDIQDTWKSVDSIIDYICWNQDRIAPLAGPGGWN 257 (414)
T ss_pred hHHHHHhccCCceEEEeccCcccccCccCCCcchhhhhhhccccchhhhhhHHHHHHHHHHHHhhhhhhhccccCCCCCC
Confidence 9999999999999999999999888877 56789999999999999999999998 567888999999999
Q ss_pred CCCccccCCCCCCHHHHHHHHHHHHHHhCceeecCCCCCCCHHHHHhhccHhHHhhccCCCCCccEEeeecCCCCceeEE
Q 012852 295 DPDMLEVGNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVYVSGTDNCLQVW 374 (455)
Q Consensus 295 DpDmL~vg~~~lT~~E~rt~~slwa~~gsPL~is~Dl~~l~~~~~~lL~N~e~iainQd~lG~~~r~v~~~~~~~~~~vw 374 (455)
|||||++||.++|.+|+++||++||++++||++|+|++.++++.+++|+|+|+|+|||||+|.|+|.+...+++ .+||
T Consensus 258 DpDmL~iGN~G~s~e~y~~qf~lWai~kAPLlms~Dlr~is~~~~~il~nk~~IaiNQDplgiqGr~i~~e~~~--ievw 335 (414)
T KOG2366|consen 258 DPDMLEIGNGGMSYEEYKGQFALWAILKAPLLMSNDLRLISKQTKEILQNKEVIAINQDPLGIQGRKIVLEGDS--IEVW 335 (414)
T ss_pred ChhHhhcCCCCccHHHHHHHHHHHHHhhchhhhccchhhcCHHHHHHhcChhheeccCCccchhheeeeecCCc--eEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999854432 8999
Q ss_pred EEEcCCCcEEEEEEecC--CCceeEE-EEceecCCCCCCceEEEEccCCccccccccceEEEEEcCCCEEEEEEEeCC
Q 012852 375 VGPLSGHRLVVALWNRC--PKAETIT-AQWDALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQVDAHDCQMYIFTPRT 449 (455)
Q Consensus 375 ~~~l~dg~~avalfN~~--~~~~~it-i~l~~LGL~~~~~~~vrDlW~g~~~~g~~~~~l~~~L~pH~~~ll~ltp~~ 449 (455)
++|++..++||+++|+. ..++.|+ +.|..+|+.....|.++|||+|.......+++++++|+|||++||++.+..
T Consensus 336 ~~pls~~~~Ava~lNr~~~~~~~~It~~~l~~~g~~~~~~~~~~dLw~~~~~~~~~~~~i~~~V~phG~~l~~l~~~~ 413 (414)
T KOG2366|consen 336 SGPLSGKSVAVAFLNRRKTGIPARITAASLRELGLTNPASYTAHDLWSGVLGFLPTKDSISAQVNPHGVVLFVLHPSN 413 (414)
T ss_pred eeccCCceEEEEEecccCCCCCccccHHHHhhcCCCCCceeEeeehhhccccccccCCeEEEEECCCCcEEEEEEecc
Confidence 99999999999999998 4577888 889999998888999999999953336788999999999999999999865
|
|
| >PLN02899 alpha-galactosidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-78 Score=632.17 Aligned_cols=363 Identities=27% Similarity=0.462 Sum_probs=304.9
Q ss_pred ccccCCCCCCCceEEechhhhCcCCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCC-------------CCCCCCc
Q 012852 81 LQLNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPL-------------RDLKGQL 147 (455)
Q Consensus 81 ~~~~~~~~~~pP~gwnSW~~~~~~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~-------------rd~~G~~ 147 (455)
....++++++||||||||+.|.++|||+.++++||. .+.||+++||+||+|||||+... ||.+|++
T Consensus 21 ~~~~~glA~TPPMGWNSWn~f~~~I~E~~i~~~Ad~-vs~GLk~~GY~YVnIDDcW~~~~~~g~~~~s~g~~~~D~~GrL 99 (633)
T PLN02899 21 ASSQQQLASFPPRGWNSYDSFSWIVSEEEFLQNAEI-VSQRLLPFGYEYVVVDYLWYRKKVEGAYVDSLGFDVIDEWGRP 99 (633)
T ss_pred ccccCcccCCCCCCCcchhhhccCCCHHHHHHHHHH-HHcchHhhCCeEEEEccccccccccccccccccccccCCCCCC
Confidence 445778999999999999999999999999999995 57899999999999999998642 5778999
Q ss_pred ccCCCCCCC-----CHHHHHHHHHhcCCeEEEEecCCccccC--------------------------------------
Q 012852 148 VPDTITFPS-----GIKALADYVHGKGLKLGIYSDAGVFTCQ-------------------------------------- 184 (455)
Q Consensus 148 ~~d~~~FP~-----Gl~~l~~~v~~~G~k~Glw~~pg~~~c~-------------------------------------- 184 (455)
+||++|||+ |||+|+||||++|||||||.++|+.+|.
T Consensus 100 vPDp~RFPSs~~g~GmK~LADYVHskGLKFGIY~~~Gi~tcA~~~~~PI~gs~~g~~y~~s~~~~~a~DIa~~~~tC~w~ 179 (633)
T PLN02899 100 IPDPGRWPSSRGGKGFTEVAEKVHAMGLKFGIHVMRGISTQAVNANTPILDAVKGGAYEESGRQWRAKDIALKERACAWM 179 (633)
T ss_pred ccCcccCCCCccCCCcHHHHHHHHhCCcceEEEecCCCcccccccCCccccccccccccccccccchhhccccccccccC
Confidence 999999998 9999999999999999999999865541
Q ss_pred ---------CCCcccccHHhHHHHHHhcCCcEEEeecCCCCCCCccchhHHHHHHHHhcCCCeeEeeCCCCCCChhhhh-
Q 012852 185 ---------VRPGSLFHEKDDAPLFASWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWA- 254 (455)
Q Consensus 185 ---------~~Pg~~~~~~~~~~~~~~wGidylK~D~~~~~~~~~~~~y~~m~~AL~~~G~~i~~~~c~~g~~~p~~w~- 254 (455)
+.|+.++|++.++++|++|||||||+|+|+.... ..+.|..|++||+++||||+|++|++.. .+..|.
T Consensus 180 ~~g~~~vDa~~~~g~a~~~Sla~tfAsWGVDyLKyD~c~~~~~-~~~ey~~ms~AL~aTGRPIvySLspG~~-~~p~wa~ 257 (633)
T PLN02899 180 SHGFMSVNTKLGAGKAFLRSLYDQYAEWGVDFVKHDCVFGDDF-DLEEITYVSEVLKELDRPIVYSLSPGTS-ATPTMAK 257 (633)
T ss_pred CCCcccccccccchhhhhHHHHHHHHHhCCCEEEEcCCCCCCC-ChHHHHHHHHHHHHhCCCeEEEecCCcc-cchhhhh
Confidence 1234577888889999999999999999875433 3567999999999999999999997443 333454
Q ss_pred --hhccCeeeecCCCCCChhHHHHHHHhhccccccc-------CCCCcCCCCccccCC-------------CCCCHHHHH
Q 012852 255 --GKVGNSWRTTGDINDTWASMTSIADINDKWASYA-------GPGGWNDPDMLEVGN-------------GGMSYQEYR 312 (455)
Q Consensus 255 --~~~~~~~Ris~Di~~~W~~~~~~~~~~~~~~~~~-------g~g~~nDpDmL~vg~-------------~~lT~~E~r 312 (455)
.+++|+||+++|+++.|.++..+++....|+.++ ++++|||||||+||. .+||.+|+|
T Consensus 258 ~v~~~aNmWRitgDI~D~W~sV~~~~d~~~~~~~~~~~g~~G~~gg~WNDpDML~VG~lg~~~~n~G~~r~~~LT~dE~r 337 (633)
T PLN02899 258 EVSGLVNMYRITGDDWDTWGDVAAHFDVSRDFAAAGLIGAKGLRGRSWPDLDMLPLGWLTDPGSNVGPHRACNLTLDEQK 337 (633)
T ss_pred hhhccCccceecCCcccchHHHHHHHHHHHHHhhccccccCCCCCCCCCCcceecccCCCccccccCccccCCCCHHHHH
Confidence 4668999999999999999998887655554322 235899999999992 259999999
Q ss_pred HHHHHHHHHhCceeecCCCCCCCHHHHHhhccHhHHhhccCCCCCccEEeee----------------------------
Q 012852 313 AHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVYV---------------------------- 364 (455)
Q Consensus 313 t~~slwa~~gsPL~is~Dl~~l~~~~~~lL~N~e~iainQd~lG~~~r~v~~---------------------------- 364 (455)
|||+||||++||||+|+||++|++++++||+|+||||||||+++.+.-+...
T Consensus 338 ThfSLWAm~aSPLiiG~DLr~md~~tl~ILTNkeVIAINQds~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 417 (633)
T PLN02899 338 TQMTLWAMAKSPLMYGGDLRKLDQATYSLITNPTLLEINSHSSNNMEFPYVTSTRRNKKKSHSQHSTGVGKSDPSVLGLT 417 (633)
T ss_pred HHHHHHHHHhCchhhcCCcccCCHHHHHHhcCHHHeEEccCccCCeeeeeEeccccccccccccccccCCCCCcceEEEE
Confidence 9999999999999999999999999999999999999999987633221000
Q ss_pred ------------------------------cC---------------C--------------------------------
Q 012852 365 ------------------------------SG---------------T-------------------------------- 367 (455)
Q Consensus 365 ------------------------------~~---------------~-------------------------------- 367 (455)
.. +
T Consensus 418 ~c~~~~~~~w~~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~ 497 (633)
T PLN02899 418 SCKDSKANGWSIRSLDKDLDQICWNEKMGRRGEEPLCLYKTKPLLASDEEIIHNSEYQGKLHLLTSDGGELCLDASPKQK 497 (633)
T ss_pred ecCCCCCCceeEEecCCCcceeeccccccccCCCCeeeecccCCcccchhhhhcccccceEEeeeccccChhhccCCCCC
Confidence 00 0
Q ss_pred --------------------------C-----------------------CceeEEEEEcCCCcEEEEEEecCCCceeEE
Q 012852 368 --------------------------D-----------------------NCLQVWVGPLSGHRLVVALWNRCPKAETIT 398 (455)
Q Consensus 368 --------------------------~-----------------------~~~~vw~~~l~dg~~avalfN~~~~~~~it 398 (455)
+ +...+|+..-++|.+||+|||.+.+.++|+
T Consensus 498 ~~~~~~~~~~fs~c~~~~~q~w~l~~~g~l~~~~sglca~v~~~~~~~~~~~~r~w~a~g~~g~~y~~~fnl~~~~~~~~ 577 (633)
T PLN02899 498 RTSKDFRSGSFSPCRWDANQMWELNNNGTLISSYSGLCATVNSVVAEVATGGVRSWIATGRKGEIYVAFFNLNQEKTKIS 577 (633)
T ss_pred cCHhHhhccccCCCCCChhhceeeCCCCCEecCccccceEeeccccccccCceeEEEEcCCCccEEEEEEecCccceeEE
Confidence 0 001478888888999999999999999999
Q ss_pred EEceecC--CCC-----CCceEEEEccCCccccccccceEEEEEcCCCEEEEEEEe
Q 012852 399 AQWDALG--LES-----STKVSVRDLWQHKQVTGDAVSSFGAQVDAHDCQMYIFTP 447 (455)
Q Consensus 399 i~l~~LG--L~~-----~~~~~vrDlW~g~~~~g~~~~~l~~~L~pH~~~ll~ltp 447 (455)
+.+++|. |++ ...++.+|||+++++ +.++++++..|+.|||+||.|+.
T Consensus 578 ~~~~~~~~~~~~~~~~~~~~c~~~e~w~~~~~-~~~~~~~~~~v~~hg~~~~~~~c 632 (633)
T PLN02899 578 AKISDLAKALPGSKNLRTSSCTGHEVWSGKDF-GVIKDSISATVEIHGCALFVLHC 632 (633)
T ss_pred EEhhHhHhhccccccccccccceEEeccCCCc-ccccccEEEEeecCceEEEEEeC
Confidence 9999873 333 347889999999999 99999999999999999999974
|
|
| >PLN03231 putative alpha-galactosidase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-75 Score=591.15 Aligned_cols=265 Identities=34% Similarity=0.553 Sum_probs=236.0
Q ss_pred CceEEechhhhCcCCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCC----------------CCCCCCCcccCCCCC
Q 012852 91 PQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSP----------------LRDLKGQLVPDTITF 154 (455)
Q Consensus 91 pP~gwnSW~~~~~~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~----------------~rd~~G~~~~d~~~F 154 (455)
||||||||+.|.|+|||+.|+++|| ++++||+++||+||+|||||+.. .||.+|+++||++||
T Consensus 1 PpMGWNSWn~f~~~i~E~~i~~~Ad-~v~~gL~~~GY~Yv~iDd~W~~~~~~g~~~~~~~~~~~~~~d~~G~l~pd~~rF 79 (357)
T PLN03231 1 PPRGWNSYDSFSFTISEEQFLENAK-IVSETLKPHGYEYVVIDYLWYRKLKHGWFKTSAKSPGYDLIDKWGRPLPDPKRW 79 (357)
T ss_pred CCCCccchhccCcCcCHHHHHHHHH-HHHcchHHhCCEEEEECCcccccccccccccccccccccccCCCCCcccCcccC
Confidence 8999999999999999999999999 77999999999999999999863 268889999999999
Q ss_pred CC-----CHHHHHHHHHhcCCeEEEEecCCccccC--------CCC----------------------------------
Q 012852 155 PS-----GIKALADYVHGKGLKLGIYSDAGVFTCQ--------VRP---------------------------------- 187 (455)
Q Consensus 155 P~-----Gl~~l~~~v~~~G~k~Glw~~pg~~~c~--------~~P---------------------------------- 187 (455)
|+ |||+|+||||++|||||||+.+|+.+|. +.|
T Consensus 80 Ps~~~~~G~k~lADyvHs~GLKfGIY~~~G~~tca~~~~~pi~G~~Gs~g~~~~a~Dia~~~~~c~~~~~~~~~v~~~~~ 159 (357)
T PLN03231 80 PSTTGGKGFAPIAAKVHALGLKLGIHVMRGISTTAVKKKTPILGAFKSNGHAWNAKDIALMDQACPWMQQCFVGVNTSSE 159 (357)
T ss_pred CCCccccCcHHHHHHHHhCCcceEEEecCCccchhcccCCccCCCCcccccccchhhhccccccccccccccccccccch
Confidence 99 9999999999999999999999988874 333
Q ss_pred cccccHHhHHHHHHhcCCcEEEeecCCCCCCCccchhHHHHHHHHhcCCCeeEeeCCCCCCChhhhh---hhccCeeeec
Q 012852 188 GSLFHEKDDAPLFASWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWA---GKVGNSWRTT 264 (455)
Q Consensus 188 g~~~~~~~~~~~~~~wGidylK~D~~~~~~~~~~~~y~~m~~AL~~~G~~i~~~~c~~g~~~p~~w~---~~~~~~~Ris 264 (455)
|+++|++.++++|++|||||||+|+|+.......++|..|++||+++||||+||+|++.. .+..|. .+++|+||++
T Consensus 160 gaq~y~~~~a~~fA~WGVDylK~D~c~~~~~~~~~~y~~m~~AL~~tGRpIv~Slc~g~~-~~~~~~~~i~~~an~WR~s 238 (357)
T PLN03231 160 GGKLFIQSLYDQYASWGIDFIKHDCVFGAENPQLDEILTVSKAIRNSGRPMIYSLSPGDG-ATPGLAARVAQLVNMYRVT 238 (357)
T ss_pred hHHHHHHHHHHHHHHhCCCEEeecccCCCCcccHHHHHHHHHHHHHhCCCeEEEecCCCC-CCchhhhhhhhhcCccccc
Confidence 445577888999999999999999997655556789999999999999999999997443 333343 4668999999
Q ss_pred CCCCCChhHHHHHHHhhcccc--------cccCCCCcCCCCccccC-------------CCCCCHHHHHHHHHHHHHHhC
Q 012852 265 GDINDTWASMTSIADINDKWA--------SYAGPGGWNDPDMLEVG-------------NGGMSYQEYRAHFSIWALMKA 323 (455)
Q Consensus 265 ~Di~~~W~~~~~~~~~~~~~~--------~~~g~g~~nDpDmL~vg-------------~~~lT~~E~rt~~slwa~~gs 323 (455)
+||++.|+++.++++.+..++ .+++||+|||||||+|| +++||.+|+|||||||||++|
T Consensus 239 ~DI~d~W~~v~~~~~~~~~~~~~~~~~~~~~agpG~WnD~DML~vG~~g~~~~~~g~~~~~glT~~E~rthfslWam~~S 318 (357)
T PLN03231 239 GDDWDDWKYLVKHFDVARDFAAAGLIAIPSVVGGKSWVDLDMLPFGRLTDPAAAYGPYRNSRLSLEEKKTQMTLWAVAKS 318 (357)
T ss_pred CCcccchhhHHHHHHHHHHHhhhcccccccCCCCCCCCCccchhcCCCCCCcccccccccCCCCHHHHHHHHHHHHHHhC
Confidence 999999999988887654333 26789999999999999 357999999999999999999
Q ss_pred ceeecCCCCCCCHHHHHhhccHhHHhhccCCCCC
Q 012852 324 PLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGV 357 (455)
Q Consensus 324 PL~is~Dl~~l~~~~~~lL~N~e~iainQd~lG~ 357 (455)
|||+|+||++|++++++||+|+||||||||++|.
T Consensus 319 PLiiG~DL~~~~~~tl~iLtN~evIAINQD~lG~ 352 (357)
T PLN03231 319 PLMFGGDLRRLDNETLSLLTNPTVLEVNSHSTGN 352 (357)
T ss_pred chhhcCCcccCCHHHHHHhcChHHheecCCcccc
Confidence 9999999999999999999999999999999985
|
|
| >PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-47 Score=390.11 Aligned_cols=335 Identities=25% Similarity=0.390 Sum_probs=213.5
Q ss_pred ccccceEEEEecc----hhhHHHHHHHhhcccccccccCCCCCCCceEEechhhhCcCCCHHHHHHHHHHHHHcCCcccC
Q 012852 51 PLLQSYEKASYSR----GFSRNFGKIFDTSNYGILQLNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELG 126 (455)
Q Consensus 51 ~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~pP~gwnSW~~~~~~i~e~~i~~~ad~~~~~gl~~~G 126 (455)
||+||+++++||. |||++||+++|+++.+.. ...++|||+||||+++++++||+.|+++|+.+ +++|
T Consensus 1 sf~tP~~~~~~s~~gl~~~s~~~h~~~r~~~~~~~----~~~~~~pv~~nsW~~~~~d~~e~~i~~~a~~~-----~~~G 71 (394)
T PF02065_consen 1 SFQTPEAVASYSDQGLNGMSQRFHRFVRRHLLRPP----WRDKPPPVGWNSWEAYYFDITEEKILELADAA-----AELG 71 (394)
T ss_dssp EEE---EEEEEESBHHHHHHHHHHHHHHHHTSTTT----TTTSS--EEEESHHHHTTG--HHHHHHHHHHH-----HHHT
T ss_pred CccCCeEEEEEecCCHHHHHHHHHHHHHHhcCCCc----cCCCCCceEEEcccccCcCCCHHHHHHHHHHH-----HHhC
Confidence 6889999999995 788999999999987643 24688999999999999999999999999999 6799
Q ss_pred ceEEEecCCcCCCCCCCC----CCcccCCCCCCCCHHHHHHHHHhcCCeEEEEecCCcc---------------------
Q 012852 127 YDHVNIDDCWSSPLRDLK----GQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVF--------------------- 181 (455)
Q Consensus 127 ~~~~~iDDGW~~~~rd~~----G~~~~d~~~FP~Gl~~l~~~v~~~G~k~Glw~~pg~~--------------------- 181 (455)
|++||||||||.. |+.+ |+|.+|++|||+||++|+++||++|||||||++|++.
T Consensus 72 ~e~fviDDGW~~~-r~~d~~~~GdW~~~~~kFP~Gl~~l~~~i~~~Gmk~GlW~ePe~v~~~S~l~~~hPdw~l~~~~~~ 150 (394)
T PF02065_consen 72 YEYFVIDDGWFGG-RDDDNAGLGDWEPDPKKFPNGLKPLADYIHSLGMKFGLWFEPEMVSPDSDLYREHPDWVLRDPGRP 150 (394)
T ss_dssp -SEEEE-SSSBCT-ESTTTSTTSBECBBTTTSTTHHHHHHHHHHHTT-EEEEEEETTEEESSSCHCCSSBGGBTCCTTSE
T ss_pred CEEEEEcCccccc-cCCCcccCCceeEChhhhCCcHHHHHHHHHHCCCeEEEEeccccccchhHHHHhCccceeecCCCC
Confidence 9999999999985 5444 9999999999999999999999999999999999851
Q ss_pred ---------ccCCCCcccccHHh-HHHHHHhcCCcEEEeecCCCCCC--C-----ccchhH----HHHHHHHhcCCCeeE
Q 012852 182 ---------TCQVRPGSLFHEKD-DAPLFASWGVDYLKYDNCFNLGI--E-----PKKRYP----PMRDALNETGCSIFY 240 (455)
Q Consensus 182 ---------~c~~~Pg~~~~~~~-~~~~~~~wGidylK~D~~~~~~~--~-----~~~~y~----~m~~AL~~~G~~i~~ 240 (455)
.+.++|++++|+.+ ..+++++|||||||||||..... . ...+|. ++.++|++..+++++
T Consensus 151 ~~~~r~~~vLD~~~pev~~~l~~~i~~ll~~~gidYiK~D~n~~~~~~~~~~~~~~~~~~~~~~y~l~~~L~~~~P~v~i 230 (394)
T PF02065_consen 151 PTLGRNQYVLDLSNPEVRDYLFEVIDRLLREWGIDYIKWDFNRDITEAGSPSLPEGYHRYVLGLYRLLDRLRARFPDVLI 230 (394)
T ss_dssp -ECBTTBEEB-TTSHHHHHHHHHHHHHHHHHTT-SEEEEE-TS-TTS-SSTTS-GHHHHHHHHHHHHHHHHHHHTTTSEE
T ss_pred CcCcccceEEcCCCHHHHHHHHHHHHHHHHhcCCCEEEeccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHHhCCCcEE
Confidence 12578899999865 45678999999999999975421 1 122333 488889999999999
Q ss_pred eeCCCCC--CChhhhhhhcc-CeeeecCCCCCChhHHHHHHHhhcccccccCCCCc-CCCCccccCCCCCCHHHHHHHHH
Q 012852 241 SLCEWGV--DDPALWAGKVG-NSWRTTGDINDTWASMTSIADINDKWASYAGPGGW-NDPDMLEVGNGGMSYQEYRAHFS 316 (455)
Q Consensus 241 ~~c~~g~--~~p~~w~~~~~-~~~Ris~Di~~~W~~~~~~~~~~~~~~~~~g~g~~-nDpDmL~vg~~~lT~~E~rt~~s 316 (455)
+.|++|. .++++. .+. ..| +| |.++.++++.... ......+..-.+.| .+.....++ ..++-+.|++++
T Consensus 231 E~CssGG~R~D~g~l--~~~~~~w-~S-D~tda~~R~~iq~-g~s~~~p~~~~~~hv~~~p~~~~~--r~~~l~~r~~~a 303 (394)
T PF02065_consen 231 ENCSSGGGRFDPGML--YYTPQSW-TS-DNTDALERLRIQY-GTSLFYPPEYMGAHVSASPNHQTG--RTTPLEFRAHVA 303 (394)
T ss_dssp EE-BTTBTTTSHHHH--CCSSEEE-SB-ST-SHHHHHHHHH-HHCTTSSGGGEEEEEEHSS-TTTH--HHGGHHHHHHHH
T ss_pred EeccCCCCccccchh--eeccccc-cC-CccchHHHhhhhc-ccccccCHHHhCCeEEeccccccC--Ccccceechhhh
Confidence 9999884 445433 343 445 44 6677766654332 22211111111212 121111111 124455565544
Q ss_pred HHHHHhCceeecCCCCCCCHHHHHhhccHhHHhhccCC--CCCccEEeeecCC-CCceeEEEEEcCCCcEEEEE-EecCC
Q 012852 317 IWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDP--LGVQGRKVYVSGT-DNCLQVWVGPLSGHRLVVAL-WNRCP 392 (455)
Q Consensus 317 lwa~~gsPL~is~Dl~~l~~~~~~lL~N~e~iainQd~--lG~~~r~v~~~~~-~~~~~vw~~~l~dg~~aval-fN~~~ 392 (455)
+| +.+.++.|+.++++++++.++. .||+-+.. +.+.++...-... +.....|.....|++.+|++ |....
T Consensus 304 ~~----g~~g~e~dl~~ls~~e~~~~~~--~ia~YK~~r~li~~G~~yrL~~p~~~~~~~~~~v~~d~~~av~~~~~~~~ 377 (394)
T PF02065_consen 304 MF----GRLGLELDLTKLSEEELAAVKE--QIAFYKSIRPLIQSGDFYRLDSPDDSNWDAWQVVSPDKSEAVVFVFRLLS 377 (394)
T ss_dssp TC----SEEEEESTGCGS-HHHHHHHHH--HHHHHHHCHHHHHHSEEEECCTTCCHCEEEEEEE-TTSSEEEEEEEETSS
T ss_pred hc----CCceeccCcccCCHHHHHHHHH--HHHHHHhHHHHhcCCcEEEecCCCccceEEEEEEcCCCCEEEEEEEEccc
Confidence 43 7888999999999999988764 44443221 1222333322211 22356787777788777765 55544
Q ss_pred CceeEEEEceecCCCC
Q 012852 393 KAETITAQWDALGLES 408 (455)
Q Consensus 393 ~~~~iti~l~~LGL~~ 408 (455)
........+.--||++
T Consensus 378 ~~~~~~~~l~l~gLd~ 393 (394)
T PF02065_consen 378 SPNPPPPRLRLRGLDP 393 (394)
T ss_dssp -SSEE-EEEEE-S--T
T ss_pred CCCCCCcceeCCCCCc
Confidence 4433333444346654
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycosyl hydrolase family 27, family 31 and family 36 alpha-galactosidases form the glycosyl hydrolase clan GH-D (acc_GH from CAZY), a superfamily of alpha-galactosidases, alpha-N-acetylgalactosaminidases, and isomaltodextranases which are likely to share a common catalytic mechanism and structural topology. Alpha-galactosidase (3.2.1.22 from EC) (melibiase) [] catalyzes the hydrolysis of melibiose into galactose and glucose. In man, the deficiency of this enzyme is the cause of Fabry's disease (X-linked sphingolipidosis). Alpha-galactosidase is present in a variety of organisms. There is a considerable degree of similarity in the sequence of alpha-galactosidase from various eukaryotic species. Escherichia coli alpha-galactosidase (gene melA), which requires NAD and magnesium as cofactors, is not structurally related to the eukaryotic enzymes; by contrast, an Escherichia coli plasmid encoded alpha-galactosidase (gene rafA P16551 from SWISSPROT) [] contains a region of about 50 amino acids which is similar to a domain of the eukaryotic alpha-galactosidases. Alpha-N-acetylgalactosaminidase (3.2.1.49 from EC) [] catalyzes the hydrolysis of terminal non-reducing N-acetyl-D-galactosamine residues in N-acetyl-alpha-D- galactosaminides. In man, the deficiency of this enzyme is the cause of Schindler and Kanzaki diseases. The sequence of this enzyme is highly related to that of the eukaryotic alpha-galactosidases.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1KTC_A 1KTB_A 1UAS_A 3H55_A 3H53_A 3IGU_B 3H54_A 3LRM_A 3LRL_A 3LRK_A .... |
| >COG3345 GalA Alpha-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-36 Score=307.60 Aligned_cols=305 Identities=17% Similarity=0.234 Sum_probs=212.4
Q ss_pred ceeEeeeeecccceeeeeeeehhhccccccccccccc--ccccceEEEEecc----hhhHHHHHHHhhcccccccccCCC
Q 012852 14 EKMRVGVAMSSMKKKRFVFALVLSLIIDVGFAGRVVV--PLLQSYEKASYSR----GFSRNFGKIFDTSNYGILQLNNGL 87 (455)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~ 87 (455)
.+.+..|+++...+.|+.. ++.|..+.|-+.+ ++.||+++++|++ |||+.+|.++|.++.+. +-.
T Consensus 218 gnf~~f~ev~q~~~~~Vq~-----g~l~~~~e~~l~~~e~f~tpe~lv~~edqgl~~lsq~y~~~v~~~i~~~----~~~ 288 (687)
T COG3345 218 GNFAAFVEVHQHPFFRVQD-----GILPFDGEWFLEEFESFVTPEVLVVLEDQGLNGLSQKYAELVRMEIVPR----PRV 288 (687)
T ss_pred cchhheeeeccCchhhhhh-----cccccCceEecccccccCCceEEEEEcCCCcchHHHHHHHHHHhhcCcc----ccc
Confidence 4567889999999999888 9999999999999 9999999999997 89999999999887752 225
Q ss_pred CCCCceEEechhhhCcCCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCC----CCcccCCCCCCCCHHHHHH
Q 012852 88 ASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLK----GQLVPDTITFPSGIKALAD 163 (455)
Q Consensus 88 ~~~pP~gwnSW~~~~~~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~----G~~~~d~~~FP~Gl~~l~~ 163 (455)
.+++|||||||+++|+++|++.++++++.+ |+.|+|.|+||||||+ .|++| |||.+|.+|||+|+.+|++
T Consensus 289 ~kprPi~~nsWea~Yfd~t~e~ile~vk~a-----kk~gvE~FvlDDGwfg-~rndd~~slGDWlv~seKfPsgiE~li~ 362 (687)
T COG3345 289 KKPRPIGWNSWEAYYFDFTEEEILENVKEA-----KKFGVELFVLDDGWFG-GRNDDLKSLGDWLVNSEKFPSGIEELIE 362 (687)
T ss_pred CCCCcceeeceeeeeecCCHHHHHHHHHHH-----hhcCeEEEEEcccccc-ccCcchhhhhceecchhhccccHHHHHH
Confidence 688999999999999999999999999999 7799999999999999 45544 9999999999999999999
Q ss_pred HHHhcCCeEEEEecCCcccc------------------------------CCCCcccccH---------HhHHHHHH-hc
Q 012852 164 YVHGKGLKLGIYSDAGVFTC------------------------------QVRPGSLFHE---------KDDAPLFA-SW 203 (455)
Q Consensus 164 ~v~~~G~k~Glw~~pg~~~c------------------------------~~~Pg~~~~~---------~~~~~~~~-~w 203 (455)
.|++.||+||||++|+|..- ..+|.+..++ ...++.++ +|
T Consensus 363 ~I~e~Gl~fGIWlePemvs~dSdlfrqHPDWvvk~~G~p~~~~Rnqyvl~~s~p~vv~~l~~~l~qll~~~~v~ylkwdm 442 (687)
T COG3345 363 AIAENGLIFGIWLEPEMVSEDSDLFRQHPDWVVKVNGYPLMAGRNQYVLWLSNPIVVLDLSEDLVQLLLFHLVSYLKWDM 442 (687)
T ss_pred HHHHcCCccceeecchhcccchHHHhhCCCeEEecCCccccccccchhhhccChHHHHHhhhHHHHHHHhhhHHHHHHHh
Confidence 99999999999999987210 1234443333 34455566 66
Q ss_pred CCcEEEeecCCCCCCCccchhH--HHHHHHHhcCCCeeEeeCCCCCC--Chhhhhhhc-cCeeeecCCCCCChhHHHHHH
Q 012852 204 GVDYLKYDNCFNLGIEPKKRYP--PMRDALNETGCSIFYSLCEWGVD--DPALWAGKV-GNSWRTTGDINDTWASMTSIA 278 (455)
Q Consensus 204 GidylK~D~~~~~~~~~~~~y~--~m~~AL~~~G~~i~~~~c~~g~~--~p~~w~~~~-~~~~Ris~Di~~~W~~~~~~~ 278 (455)
|..++|+|+.+++... +++|. .+-+-|+.-...+.|.-|..|.. ++++. .+ .+.|- .|..|+.+++. +.
T Consensus 443 nr~l~klg~~~~~~l~-qqry~ly~l~~~l~~k~~~i~FeScasGg~r~d~gml--~~~~~~w~--Sd~~dAi~r~~-iq 516 (687)
T COG3345 443 NRELFKLGFLFWGALP-QQRYQLYRLFDQLNLKFPHILFESCASGGERIDKGML--EYSPQLWC--SDLTDAIGRLD-IQ 516 (687)
T ss_pred CcceeecCCCCCcccc-chHHHHHHHHHHhhhcCCCchhhhhcccccccchHHh--hhcccccC--CCCcchhhhcc-cc
Confidence 7777777777666443 44454 33445666677888998987652 33322 22 34553 34455544432 11
Q ss_pred HhhcccccccCCC-CcCCCCccccCCCCCCHHHHHHHHHHHHHHhCceeecCCCCCCCHHHHHhhccH
Q 012852 279 DINDKWASYAGPG-GWNDPDMLEVGNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNK 345 (455)
Q Consensus 279 ~~~~~~~~~~g~g-~~nDpDmL~vg~~~lT~~E~rt~~slwa~~gsPL~is~Dl~~l~~~~~~lL~N~ 345 (455)
.......+....| |..+-....+ ..||.-|.|-.+++...+|- --|+..++++.++..++.
T Consensus 517 rg~s~~~P~~~mGaHi~~~p~h~~--~rm~~l~~rg~~a~~g~~g~----elD~~~lsdeek~~~akq 578 (687)
T COG3345 517 RGGSYTYPPESMGAHISAVPNHQA--RRMTSLETRGLVAHFGFWGY----ELDCTILSDEEKDLTAKQ 578 (687)
T ss_pred ccCcccCChHHhhhhccCCCcHHH--hhhhhhhhhhHHHHhhhhcc----CCCcccCCHHHHHHHHHH
Confidence 1111111100111 1111111111 23666676655555544443 337778888877776654
|
|
| >PLN02219 probable galactinol--sucrose galactosyltransferase 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=8e-25 Score=234.99 Aligned_cols=350 Identities=16% Similarity=0.163 Sum_probs=227.1
Q ss_pred CCCCc-----eEEechhhhCcCCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCC----------------CC
Q 012852 88 ASTPQ-----MGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLK----------------GQ 146 (455)
Q Consensus 88 ~~~pP-----~gwnSW~~~~~~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~----------------G~ 146 (455)
.++.| +|||||++||.++||+.|++.++.|++.|.. .++++||||||....+.. -+
T Consensus 191 ~K~~p~~~D~~GWCTWdafy~dVt~~~I~~~l~~l~e~gip---~~~viIDDGwQsi~~~~~~~~~~~~~g~qf~~rL~~ 267 (775)
T PLN02219 191 KKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSEGGTP---PKFLIIDDGWQQIENKEKDENCVVQEGAQFATRLTG 267 (775)
T ss_pred cccCccccceeeEEEhhHhhccCCHHHHHHHHHHHHhCCCC---ceEEEEccCccccccccccccccccccchhhhhhcc
Confidence 46778 9999999999999999999999999886654 699999999998543311 12
Q ss_pred cccCCC--------CCCCCHHHHHHHHHh-cCCe-EEEEecC---------C---c--ccc------------CC-----
Q 012852 147 LVPDTI--------TFPSGIKALADYVHG-KGLK-LGIYSDA---------G---V--FTC------------QV----- 185 (455)
Q Consensus 147 ~~~d~~--------~FP~Gl~~l~~~v~~-~G~k-~Glw~~p---------g---~--~~c------------~~----- 185 (455)
+..|++ .||.|||.+++.+|+ .|+| +|+|.+- + + +.+ .+
T Consensus 268 f~en~KF~~~~~~~~fp~Glk~~V~~iK~~~~vk~V~VWHAL~GYWGGv~P~~~~~~~Y~~~~~~p~~spg~~~~~pd~a 347 (775)
T PLN02219 268 IKENAKFQKNDQKNEQVSGLKHVVDDAKQRHNVKQVYVWHALAGYWGGVKPAAAGMEHYDSALAYPVQSPGVLGNQPDIV 347 (775)
T ss_pred ccccccccccccccCCCCcHHHHHHHHHhccCCcEEEEeeeccceecCcCCCCcccccccccccccccCCCccccCcchh
Confidence 234432 589999999999985 6887 5999863 1 1 000 00
Q ss_pred ------------CC-cccccHHhHHHHHHhcCCcEEEeecCCCCC-----C-CccchhHHHHHHHHhc------CCCeeE
Q 012852 186 ------------RP-GSLFHEKDDAPLFASWGVDYLKYDNCFNLG-----I-EPKKRYPPMRDALNET------GCSIFY 240 (455)
Q Consensus 186 ------------~P-g~~~~~~~~~~~~~~wGidylK~D~~~~~~-----~-~~~~~y~~m~~AL~~~------G~~i~~ 240 (455)
+| .++.+++.....|++.|||+||+|....-. . ...+.-++..+||+++ +..++-
T Consensus 348 ~d~l~~~G~glV~P~~~~~FYd~~hsyLas~GVDgVKVDvQ~~Le~L~~~~ggrv~la~~y~~ALe~S~~r~F~~ng~I~ 427 (775)
T PLN02219 348 MDSLSVHGLGLVNPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYQQALEASIARNFTDNGCIS 427 (775)
T ss_pred hhhhhhCCccccCHHHHHHHHHHHHHHHHHcCCCEEEEchhhhHHHhhccCCcHHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 12 246778888999999999999999976321 1 1123334556666543 444555
Q ss_pred eeCCCCCCChhhhhhhccCeeeecCCCCCChhHH-HHHHHhhcccccccCCCCcCCCCccccCCCCCCHHHHHHHHHHHH
Q 012852 241 SLCEWGVDDPALWAGKVGNSWRTTGDINDTWASM-TSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWA 319 (455)
Q Consensus 241 ~~c~~g~~~p~~w~~~~~~~~Ris~Di~~~W~~~-~~~~~~~~~~~~~~g~g~~nDpDmL~vg~~~lT~~E~rt~~slwa 319 (455)
++|+. ....|..+...+.|+|+|..+.+... .-++-.++.-+-+.+...|+|.||++..++ -.+.|.+..|
T Consensus 428 CMsh~---~d~i~~~k~sav~R~SDDF~P~dP~sh~~Hi~~nAyNSLllg~~v~PDWDMFqS~Hp-----~A~~HAaaRA 499 (775)
T PLN02219 428 CMCHN---TDGLYSAKQTAVVRASDDFYPRDPASHTIHISSVAYNTLFLGEFMQPDWDMFHSLHP-----AAEYHGAARA 499 (775)
T ss_pred ecccC---chhhhcccccceeecccccccCCCccCcchhhhhhhhhHHhccccccCchhceecCc-----cHHHHHHHHh
Confidence 44432 23466677788999999999877642 112222232334455567999999997664 5689999999
Q ss_pred HHhCceeecCCCCCCCHHHHHhhc--cHhHHhhccCCCCCccE-EeeecC---CCCceeEEEEEcCCCcEEEEEEecCCC
Q 012852 320 LMKAPLLIGCDVRNMTAETFEILS--NKEVIAVNQDPLGVQGR-KVYVSG---TDNCLQVWVGPLSGHRLVVALWNRCPK 393 (455)
Q Consensus 320 ~~gsPL~is~Dl~~l~~~~~~lL~--N~e~iainQd~lG~~~r-~v~~~~---~~~~~~vw~~~l~dg~~avalfN~~~~ 393 (455)
++|+|+++||-+.+-+-+.+.-|. +-.|++.... |.+-+ .++.+. +..-+.||... .+.-+|++||-...
T Consensus 500 iSGGPIYvSD~PG~Hdf~LLk~LvlpDGsIlR~~~p--g~PTrDclF~Dp~~dg~slLKIwn~n--~~~gviG~FNcqGa 575 (775)
T PLN02219 500 VGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLP--GRPTRDCLFADPARDGTSLLKIWNVN--KCTGVVGVFNCQGA 575 (775)
T ss_pred hcCCcEEEecCCCCccHHHHHHhhCCCCceeccccC--CCcchhhhccccCCCCceEEEEEEcc--cccceEEEEeccCC
Confidence 999999999998887766665433 2233333321 22211 111111 11346788843 44569999997654
Q ss_pred c-----------------eeEEEEceec-CCC------CCCceEEEEccCCccccccccceEEEEEcCCCEEEEEEEeCC
Q 012852 394 A-----------------ETITAQWDAL-GLE------SSTKVSVRDLWQHKQVTGDAVSSFGAQVDAHDCQMYIFTPRT 449 (455)
Q Consensus 394 ~-----------------~~iti~l~~L-GL~------~~~~~~vrDlW~g~~~~g~~~~~l~~~L~pH~~~ll~ltp~~ 449 (455)
. .+-.++..++ |+. -+..+.|+-.=+++-..-..+..++++|++-+..||-+.|.+
T Consensus 576 gW~~~~~~~~~~~~~~~~~s~~v~~~Dv~~i~~~a~~~w~~~~~vy~~~sg~l~~l~~~~~~~vtL~~~~~Ei~tv~Pv~ 655 (775)
T PLN02219 576 GWCKIEKKTRIHDTSPGTLTGSVCADDVDQIAQVAGEDWSGDSVVYAYKSGEVVRLPKGASIPVTLKVLEYELFHFCPLK 655 (775)
T ss_pred CCCchhhccccccCCCcceEEEEcchhccchhhccccCcCCCEEEEEeccCeEEEcCCCCceEEEecCCcEEEEEEeeEE
Confidence 3 2334555555 331 122344444444432111234568899999999999999998
Q ss_pred ccC
Q 012852 450 VTR 452 (455)
Q Consensus 450 ~~~ 452 (455)
...
T Consensus 656 ~~~ 658 (775)
T PLN02219 656 EIA 658 (775)
T ss_pred Eec
Confidence 664
|
|
| >PLN02355 probable galactinol--sucrose galactosyltransferase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-24 Score=232.86 Aligned_cols=349 Identities=17% Similarity=0.171 Sum_probs=224.3
Q ss_pred CCCCc-----eEEechhhhCcCCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCC----------------C
Q 012852 88 ASTPQ-----MGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKG----------------Q 146 (455)
Q Consensus 88 ~~~pP-----~gwnSW~~~~~~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G----------------~ 146 (455)
.++.| +|||||++||.++||+.|++.++.|++.|.. .++++||||||....|..+ +
T Consensus 195 ~K~~P~~ld~~GWCTW~afy~~Vt~~~I~~~l~~l~~~g~p---~~~viIDDGwQs~~~d~~~~~~~~~~~~q~~~rL~~ 271 (758)
T PLN02355 195 RKKMPDMLNWFGWCTWDAFYTNVTAEGVKQGLESLEKGGVT---PKFVIIDDGWQSVGMDPTGIECLADNSANFANRLTH 271 (758)
T ss_pred hccCCcccceeeEEehhHhhccCCHHHHHHHHHHHHhCCCC---ccEEEEeccccccccccccccccccccchhhhhhcc
Confidence 35677 9999999999999999999999999886654 6999999999985333222 2
Q ss_pred cccCCCCCC-------------CCHHHHHHHHHh-cCCe-EEEEecC---------Cc---c-------ccC--------
Q 012852 147 LVPDTITFP-------------SGIKALADYVHG-KGLK-LGIYSDA---------GV---F-------TCQ-------- 184 (455)
Q Consensus 147 ~~~d~~~FP-------------~Gl~~l~~~v~~-~G~k-~Glw~~p---------g~---~-------~c~-------- 184 (455)
+..|+ ||| .|||.+++.+|+ .|+| +|+|.+- +. . .+.
T Consensus 272 f~~n~-KF~~~~~~~~~~~~~~~Glk~~V~~iK~~~~vk~V~VWHAL~GYWGGv~P~~~~~~~Y~~~~~~p~~spGv~~~ 350 (758)
T PLN02355 272 IKENH-KFQKNGKEGHRVDDPALGLGHIVTEIKEKHSLKYVYVWHAITGYWGGVKPGVAGMEHYESKMSYPVSSPGVQSN 350 (758)
T ss_pred ccccc-cccccccccccccCCCCcHHHHHHHHHhhcCCcEEEEeeeecceecCcCCCCcccccccccccccccCCccccc
Confidence 23453 677 499999999986 6887 5999863 11 0 000
Q ss_pred ----------------CCCc-ccccHHhHHHHHHhcCCcEEEeecCCCCC-----C-CccchhHHHHHHHHhc------C
Q 012852 185 ----------------VRPG-SLFHEKDDAPLFASWGVDYLKYDNCFNLG-----I-EPKKRYPPMRDALNET------G 235 (455)
Q Consensus 185 ----------------~~Pg-~~~~~~~~~~~~~~wGidylK~D~~~~~~-----~-~~~~~y~~m~~AL~~~------G 235 (455)
-+|+ ++.+++.....|++.|||+||+|...... . ...+.-++..+||+++ +
T Consensus 351 ~~~~a~d~i~~~G~glv~Pe~~~~FY~~~hsyL~s~GVDgVKVD~Q~~le~l~~g~ggrv~la~~y~~ALe~S~~r~F~~ 430 (758)
T PLN02355 351 EPCDALESITTNGLGLVNPEKVFSFYNELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLARKYHQALEASIARNFPD 430 (758)
T ss_pred CcchhhhhcccCceeccCHHHHHHHHHHHHHHHHHcCCCeEEEchhhhHHHhhcCCCcHHHHHHHHHHHHHHHHHHhCCC
Confidence 0122 46677888899999999999999975431 1 1223334566666543 4
Q ss_pred CCeeEeeCCCCCCChhhhhhhccCeeeecCCCCCChhHH-HHHHHhhcccccccCCCCcCCCCccccCCCCCCHHHHHHH
Q 012852 236 CSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDTWASM-TSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAH 314 (455)
Q Consensus 236 ~~i~~~~c~~g~~~p~~w~~~~~~~~Ris~Di~~~W~~~-~~~~~~~~~~~~~~g~g~~nDpDmL~vg~~~lT~~E~rt~ 314 (455)
..++-++|+.+ ...|..+...+.|+|+|..+.+... .-++-.++.-+-+.+...|+|.||++..++ -.+.|
T Consensus 431 ngvI~CMs~~~---d~i~~~k~sav~R~SDDF~P~dP~sh~~Hi~~~AyNSLllg~~v~PDWDMF~S~hp-----~A~~H 502 (758)
T PLN02355 431 NGIISCMSHNT---DGLYSAKRTAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLHP-----MAEYH 502 (758)
T ss_pred CceEEecccCc---hhhcccccceeeeeccccccCCCccCchhhhhhhhhhhhhccccccCcccceecCc-----cHHHH
Confidence 44544444322 2456667788999999999887653 112223333344556667999999997654 47799
Q ss_pred HHHHHHHhCceeecCCCCCCCHHHHHhhcc--HhHHhhccCCCCCccE-EeeecC---CCCceeEEEEEcCCCcEEEEEE
Q 012852 315 FSIWALMKAPLLIGCDVRNMTAETFEILSN--KEVIAVNQDPLGVQGR-KVYVSG---TDNCLQVWVGPLSGHRLVVALW 388 (455)
Q Consensus 315 ~slwa~~gsPL~is~Dl~~l~~~~~~lL~N--~e~iainQd~lG~~~r-~v~~~~---~~~~~~vw~~~l~dg~~avalf 388 (455)
.+..|++|+|+++||-+.+-+-+.+.-|.- -.|++.... |.+-| .++.+. +..-+.||. +..+.-+|++|
T Consensus 503 AaaRAisGGPIYvSD~PG~hdf~LLk~LvlpdGsIlR~~~p--g~PtrDclF~Dp~~dg~slLKIwn--~nk~sGviG~F 578 (758)
T PLN02355 503 AAARAVGGCAIYVSDKPGQHDFNLLKKLVLPDGSILRAKLP--GRPTRDCLFSDPARDGKSLLKIWN--LNEFTGVIGVF 578 (758)
T ss_pred HHHHhccCCcEEEecCCCCccHHHHHhhhCCCCceeccccC--CCcchhhhccccccCCceEEEEEE--cCCcccEEEEE
Confidence 999999999999999988877666654332 233333221 22221 111111 112356776 44566699999
Q ss_pred ecCCCc-----e----------e--EEEEceecCCC-------CCCceEEEEccCCccccccccceEEEEEcCCCEEEEE
Q 012852 389 NRCPKA-----E----------T--ITAQWDALGLE-------SSTKVSVRDLWQHKQVTGDAVSSFGAQVDAHDCQMYI 444 (455)
Q Consensus 389 N~~~~~-----~----------~--iti~l~~LGL~-------~~~~~~vrDlW~g~~~~g~~~~~l~~~L~pH~~~ll~ 444 (455)
|-.... + + -.++++++.+. -...+-|+..=+++-+.-..+..++++|++-+..||.
T Consensus 579 NcqGagw~~~~~~~~~~~~~~~~l~~~v~~~Dv~~~~~~a~~~w~~~~~vy~~~sg~l~~~~~~~~~~vtL~~~~~eift 658 (758)
T PLN02355 579 NCQGAGWCRVGKKNLIHDEQPGTITGVIRAKDVDYLPKVADDEWTGDSIVYSHLGGEVVYLPKDASLPVTLKSREYEVFT 658 (758)
T ss_pred eccCCcccchhccccccCCCCceeEEEEccccccchhhccccCCCCCeEEEEecCceEEecCCCCceEEEecCCceEEEE
Confidence 965432 1 2 23555555211 1123445543333322112256688999999999999
Q ss_pred EEeCCccC
Q 012852 445 FTPRTVTR 452 (455)
Q Consensus 445 ltp~~~~~ 452 (455)
+.|++...
T Consensus 659 v~Pi~~~~ 666 (758)
T PLN02355 659 VVPVKELS 666 (758)
T ss_pred EeeEEEec
Confidence 99998654
|
|
| >PLN02684 Probable galactinol--sucrose galactosyltransferase | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.7e-23 Score=219.62 Aligned_cols=341 Identities=18% Similarity=0.228 Sum_probs=218.5
Q ss_pred eEEechhhhCcCCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCC------------C---cccCCCCCCC-
Q 012852 93 MGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKG------------Q---LVPDTITFPS- 156 (455)
Q Consensus 93 ~gwnSW~~~~~~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G------------~---~~~d~~~FP~- 156 (455)
+|||||++||.++|++.|++.++.+++.|.. .++++||||||....|... + +..+ .|||.
T Consensus 204 fGWCTWdafy~dVt~~~I~~~l~~l~~~g~p---~~~vIIDDGwQs~~~d~~~~~~~~~~~q~~~rL~~f~en-~KF~~~ 279 (750)
T PLN02684 204 FGWCTWDAFYQEVTQEGVEAGLKSLAAGGTP---PKFVIIDDGWQSVGGDPTVEAGDEKKEQPLLRLTGIKEN-EKFKKK 279 (750)
T ss_pred eeEEEhhHhhccCCHHHHHHHHHHHHhCCCC---ceEEEEecccccccccccccccccccchhhhhhccCccc-cccccc
Confidence 7999999999999999999999999886654 6999999999985443210 2 2344 67874
Q ss_pred -----CHHHHHHHHH-hcCCe-EEEEecC---------Cc-----cc-----c----------C--------------CC
Q 012852 157 -----GIKALADYVH-GKGLK-LGIYSDA---------GV-----FT-----C----------Q--------------VR 186 (455)
Q Consensus 157 -----Gl~~l~~~v~-~~G~k-~Glw~~p---------g~-----~~-----c----------~--------------~~ 186 (455)
|||.+++.|| +.|+| +|+|.+- +. +. + + -+
T Consensus 280 ~~p~~Glk~~V~~iK~~~~vk~V~VWHAL~GYWGGv~P~~~~~~~Y~s~~~~p~~s~gv~~~~p~~~~d~l~~~g~glv~ 359 (750)
T PLN02684 280 DDPNVGIKNIVNIAKEKHGLKYVYVWHAITGYWGGVRPGVKEMEEYGSVMKYPNVSKGVVENDPTWKTDVMTLQGLGLVN 359 (750)
T ss_pred cCCCccHHHHHHHHHhhcCCcEEEEEeeecccccccCCCCcchhhccccccccccCccccccCccccccccccCcccccC
Confidence 9999999998 66887 5999863 11 00 0 0 11
Q ss_pred Cc-ccccHHhHHHHHHhcCCcEEEeecCCCCC-----CC-ccchhHHHHHHHHhc------CCCeeEeeCCCCCCChhhh
Q 012852 187 PG-SLFHEKDDAPLFASWGVDYLKYDNCFNLG-----IE-PKKRYPPMRDALNET------GCSIFYSLCEWGVDDPALW 253 (455)
Q Consensus 187 Pg-~~~~~~~~~~~~~~wGidylK~D~~~~~~-----~~-~~~~y~~m~~AL~~~------G~~i~~~~c~~g~~~p~~w 253 (455)
|+ +..+++.....|++.|||+||+|....-. .. ..+.-++..+||+++ ++.++-++|+. ....|
T Consensus 360 P~~~~~FYd~~hsyL~s~GVDgVKVD~Q~~le~l~~~~ggrv~l~~ay~~ALe~S~~r~F~~ngvI~CMs~~---~d~i~ 436 (750)
T PLN02684 360 PKKVYKFYNELHSYLADAGIDGVKVDVQCILETLGAGLGGRVELTRQYHQALDASVARNFPDNGCIACMSHN---TDALY 436 (750)
T ss_pred HHHHHHHHHHHHHHHHHcCCCeEEEChhhhHHHhhcccCcHHHHHHHHHHHHHHHHHHhCCCCCeEEecccC---chhhh
Confidence 21 46778888999999999999999976321 11 123334555666543 23344443332 22356
Q ss_pred hhhccCeeeecCCCCCChhHH-HHHHHhhcccccccCCCCcCCCCccccCCCCCCHHHHHHHHHHHHHHhCceeecCCCC
Q 012852 254 AGKVGNSWRTTGDINDTWASM-TSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALMKAPLLIGCDVR 332 (455)
Q Consensus 254 ~~~~~~~~Ris~Di~~~W~~~-~~~~~~~~~~~~~~g~g~~nDpDmL~vg~~~lT~~E~rt~~slwa~~gsPL~is~Dl~ 332 (455)
..+...+.|+|+|..+.+... .-++-.++.-+-+.+...|+|.||++..++ -.+.|.+..|++|+|+++||.+.
T Consensus 437 ~sk~sav~R~SDDF~p~dP~sh~~Hi~~~AyNSLllg~~v~PDWDMFqS~hp-----~A~~HAaaRAisGGPIYvSD~PG 511 (750)
T PLN02684 437 CSKQTAVVRASDDFYPRDPVSHTIHIAAVAYNSVFLGEFMQPDWDMFHSLHP-----AAEYHASARAISGGPLYVSDAPG 511 (750)
T ss_pred cccccceeeeccccccCCCccchhhhhhhhhhhhhhccccccCcccceecCc-----cHHHHHHHHhhcCCceEEecCCC
Confidence 777889999999999877542 122223333344555667999999987665 46899999999999999999888
Q ss_pred CCCHHHHHhhc--cHhHHhhccCCCCCccEEe----eecC---CCCceeEEEEEcCCCcEEEEEEecCCCceeEEEEcee
Q 012852 333 NMTAETFEILS--NKEVIAVNQDPLGVQGRKV----YVSG---TDNCLQVWVGPLSGHRLVVALWNRCPKAETITAQWDA 403 (455)
Q Consensus 333 ~l~~~~~~lL~--N~e~iainQd~lG~~~r~v----~~~~---~~~~~~vw~~~l~dg~~avalfN~~~~~~~iti~l~~ 403 (455)
+-+-+.+.-|. +-.|+.... +++|. +.+. +..-+.||... .+.-+|++||-....-.-.....+
T Consensus 512 ~Hdf~LLk~LvlpDGsIlR~~~-----pg~PTrDcLF~DP~~dg~slLKIwn~n--~~tGViG~FNcqGagw~~~~~~~~ 584 (750)
T PLN02684 512 KHNFELLKKLVLPDGSILRARL-----PGRPTRDCLFSDPARDGVSLLKIWNMN--KYTGVLGVYNCQGAAWSSTERKNI 584 (750)
T ss_pred CccHHHHHhhhCCCCccccccc-----CCccchhhhccCcccCCccEEEEEEec--CCCceEEEEeccCCccCccccccc
Confidence 87766665433 223333332 23333 2221 11346788765 445589999976532211111111
Q ss_pred c-CCCC---CCceEEEEc-----------cCCcccc----------ccccceEEEEEcCCCEEEEEEEeCCccC
Q 012852 404 L-GLES---STKVSVRDL-----------WQHKQVT----------GDAVSSFGAQVDAHDCQMYIFTPRTVTR 452 (455)
Q Consensus 404 L-GL~~---~~~~~vrDl-----------W~g~~~~----------g~~~~~l~~~L~pH~~~ll~ltp~~~~~ 452 (455)
. +..+ +...+.+|+ |+++... -..+..++++|++-+..||.+.|.+...
T Consensus 585 ~~~~~~~~~s~~v~~~Dv~~~~~~a~~~~w~~~~~vy~h~s~~l~~l~~~~~~~vtL~~~~~Ei~t~~Pv~~~~ 658 (750)
T PLN02684 585 FHQTKTDSLTGSIRGRDVHLIAEAATDPNWNGDCAVYCHSRGELITMPYNASLPVSLKVLEHEIFTVTPIKHLA 658 (750)
T ss_pred cCCCCCccceeeecccccchhhhhccCCCCCCCEEEEEecCCeEEecCCCCceEEEecCCcEEEEEEeeEEEec
Confidence 0 1100 112333344 6554321 0124568899999999999999988653
|
|
| >PF05691 Raffinose_syn: Raffinose synthase or seed imbibition protein Sip1; InterPro: IPR008811 This family consists of several raffinose synthase proteins, also known as seed imbibition (Sip1) proteins | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.1e-22 Score=216.79 Aligned_cols=345 Identities=21% Similarity=0.261 Sum_probs=218.7
Q ss_pred eEEechhhhCcCCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCC------------C-----Cc---c----
Q 012852 93 MGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLK------------G-----QL---V---- 148 (455)
Q Consensus 93 ~gwnSW~~~~~~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~------------G-----~~---~---- 148 (455)
+|||||++||.+++++.|++-++.+.+.|.. ..+++||||||...++.. | +| .
T Consensus 197 lGwCTWdaf~~~v~~~~i~~~l~~L~~~gi~---~~~viIDDGWQ~~~~~~~~~~~~~~~~~~~g~q~~~rl~~~~en~k 273 (747)
T PF05691_consen 197 LGWCTWDAFYQDVTEEGILEGLKSLEEGGIP---PRFVIIDDGWQSVDNDGDDPSKDGMNLVQEGAQFPRRLTDFKENSK 273 (747)
T ss_pred hccccHHHhccccCHHHHHHHHHHHHhCCCC---ceEEEEecchhcccccCcccccccccccccccccchhhhhhhhhhh
Confidence 7999999999999999999999999886654 589999999998544322 1 11 0
Q ss_pred --c-----CCCCCCCCHHHHHHHHHhc--CCe-EEEEecC---------C-cc----c---c------------------
Q 012852 149 --P-----DTITFPSGIKALADYVHGK--GLK-LGIYSDA---------G-VF----T---C------------------ 183 (455)
Q Consensus 149 --~-----d~~~FP~Gl~~l~~~v~~~--G~k-~Glw~~p---------g-~~----~---c------------------ 183 (455)
- .++.||.||+.+++.||++ |+| +|+|.+- . +. . +
T Consensus 274 F~~~~~~~~~~~~~~GL~~~V~~ik~~~~~Ik~V~VWHAL~GYWgGi~P~~~~~~~~k~~~~~~spg~~~~~~d~~~d~~ 353 (747)
T PF05691_consen 274 FRAYKSGKSPEAFPSGLKHFVSDIKEKFPGIKYVYVWHALCGYWGGISPDGMLAYNYKLVYPKLSPGLQGNMPDLAVDSI 353 (747)
T ss_pred hhhccCCCcccCCcccHHHHHHHHHhhCCCCCEEEEeehhcceecCcCCCCccccccceeecccCCcccccCcccccccc
Confidence 1 1246999999999999987 887 6999863 1 00 0 0
Q ss_pred ------CCCC-cccccHHhHHHHHHhcCCcEEEeecCCCCCC------CccchhHHHHHHHHhc------CCCeeEeeCC
Q 012852 184 ------QVRP-GSLFHEKDDAPLFASWGVDYLKYDNCFNLGI------EPKKRYPPMRDALNET------GCSIFYSLCE 244 (455)
Q Consensus 184 ------~~~P-g~~~~~~~~~~~~~~wGidylK~D~~~~~~~------~~~~~y~~m~~AL~~~------G~~i~~~~c~ 244 (455)
.-.| .++.+++.....|++.|||+||+|....... ...+.-+++.+||+++ |..++-++|.
T Consensus 354 ~~~g~glv~p~~~~~FYd~~hsyL~s~GVDgVKVD~Q~~l~~l~~~~ggrv~la~ay~~AL~~S~~r~F~~~~vI~CMsh 433 (747)
T PF05691_consen 354 VKGGLGLVDPEDAFRFYDDFHSYLASAGVDGVKVDVQAILETLGEGYGGRVELARAYQDALEASVARHFSGNGVINCMSH 433 (747)
T ss_pred ccCcccccCHHHHHHHHHHHHHHHHHcCCCEEEEchhhhhhhhhccCCcHHHHHHHHHHHHHHHHHHhCCCCCeEEecCC
Confidence 0112 2466788888999999999999999764321 1122223455555432 3456655544
Q ss_pred CCCCChhhhh-hhccCeeeecCCCCCChhH----------HHHHHHhhcccccccCCCCcCCCCccccCCCCCCHHHHHH
Q 012852 245 WGVDDPALWA-GKVGNSWRTTGDINDTWAS----------MTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRA 313 (455)
Q Consensus 245 ~g~~~p~~w~-~~~~~~~Ris~Di~~~W~~----------~~~~~~~~~~~~~~~g~g~~nDpDmL~vg~~~lT~~E~rt 313 (455)
.+ ...|. .......|+|+|..+.+.. ...++ .++.-+-+.+...|+|.||++.-++ ..+.
T Consensus 434 ~~---~~l~~~~~~~av~R~SDDF~P~~p~s~p~g~~w~h~~Hi~-~nAyNsL~~g~~~~PDwDMF~S~h~-----~A~~ 504 (747)
T PF05691_consen 434 NP---DNLYHSTKQSAVVRNSDDFFPRDPASDPNGVFWLHTWHIA-HNAYNSLLLGQFVWPDWDMFQSSHP-----AAEF 504 (747)
T ss_pred Cc---cchhcccccccceeccccccCCCCCCCccccchhhHHHHH-HHHHHHHHHHhhcCCCcccccccCc-----cHHH
Confidence 22 23454 4556789999999886542 22333 3332233445567899999987553 5778
Q ss_pred HHHHHHHHhCceeecCCCCCCCHHHHHh--hccHhHHhhccCCCCCccE-EeeecCC---CCceeEEEEEcCCCcEEEEE
Q 012852 314 HFSIWALMKAPLLIGCDVRNMTAETFEI--LSNKEVIAVNQDPLGVQGR-KVYVSGT---DNCLQVWVGPLSGHRLVVAL 387 (455)
Q Consensus 314 ~~slwa~~gsPL~is~Dl~~l~~~~~~l--L~N~e~iainQd~lG~~~r-~v~~~~~---~~~~~vw~~~l~dg~~aval 387 (455)
|.+..|++|+|++|||.+.+.+-+.++- +.+-.++..... |.+-+ .++.+.. ..-+.||...-. .-+|++
T Consensus 505 HAaaRaiSGGPVYiSD~pG~hd~~LLk~LvlpDG~ilR~~~p--g~Pt~d~Lf~dp~~d~~~lLKi~n~n~~--~gvig~ 580 (747)
T PF05691_consen 505 HAAARAISGGPVYISDKPGKHDFDLLKKLVLPDGSILRADHP--GRPTRDCLFEDPLRDGKSLLKIWNLNKF--TGVIGV 580 (747)
T ss_pred HHHHHhhcCCCEEEeeCCCCCCHHHHHHhhCCCCceeccccC--CCCChhhhcccCCCCCceeEEEEecCCc--cceEEE
Confidence 9999999999999999998877666553 334345544432 22222 1122211 123678875433 348999
Q ss_pred EecCCC---------------ceeEE--EEceecCC-C--------CCCceEEEEccCCcccccc-ccceEEEEEcCCCE
Q 012852 388 WNRCPK---------------AETIT--AQWDALGL-E--------SSTKVSVRDLWQHKQVTGD-AVSSFGAQVDAHDC 440 (455)
Q Consensus 388 fN~~~~---------------~~~it--i~l~~LGL-~--------~~~~~~vrDlW~g~~~~g~-~~~~l~~~L~pH~~ 440 (455)
||.... +.+++ +.-+++-. . ....+.|+..=+++=..-. -+.++.++|+|-+.
T Consensus 581 FN~qgagw~~~~~~~~~~~~~~~~~t~~v~~~Dv~~~~~~~~~~~~~~~~~avY~~~~~~l~~l~~k~~~~~vtL~~~~~ 660 (747)
T PF05691_consen 581 FNCQGAGWCREERKNKSHDECPGTLTGSVRPSDVEWISEVAGADDGWNGDFAVYSHRSGELVLLPPKSESLPVTLKPLEF 660 (747)
T ss_pred EecCCCcccchhhhccccCCCCcceEeeccccccceeccccccCcCCCccEEEEEcCCCeEEEecCCCCCceEEEcCcce
Confidence 997532 12233 22223211 1 1123455544444322112 14578999999999
Q ss_pred EEEEEEeCCccCC
Q 012852 441 QMYIFTPRTVTRS 453 (455)
Q Consensus 441 ~ll~ltp~~~~~~ 453 (455)
-||-++|++...+
T Consensus 661 El~tv~Pv~~~~~ 673 (747)
T PF05691_consen 661 ELFTVSPVKVLGG 673 (747)
T ss_pred EEEEEeeEEEecC
Confidence 9999999987654
|
Raffinose (O-alpha- D-galactopyranosyl- (1-->6)- O-alpha- D-glucopyranosyl-(1-->2)- O-beta- D-fructofuranoside) is a widespread oligosaccharide in plant seeds and other tissues. Raffinose synthase (2.4.1.82 from EC) is the key enzyme that channels sucrose into the raffinose oligosaccharide pathway []. |
| >PLN02711 Probable galactinol--sucrose galactosyltransferase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-22 Score=217.47 Aligned_cols=344 Identities=17% Similarity=0.158 Sum_probs=214.7
Q ss_pred eEEechhhhCcCCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCC-------------C--------CcccC-
Q 012852 93 MGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLK-------------G--------QLVPD- 150 (455)
Q Consensus 93 ~gwnSW~~~~~~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~-------------G--------~~~~d- 150 (455)
.|||||++||.++|++.|++-++.+.+.|.. ..+++||||||....+.+ | ++..|
T Consensus 215 fGWCTWdAfy~~Vt~egI~~gl~~L~~~Gip---~~~vIIDDGWQsi~~d~~~~~~~~~~~~~~~g~q~~~rL~~f~en~ 291 (777)
T PLN02711 215 FGWCTWDAFYLTVHPQGVWEGVKGLVDGGCP---PGLVLIDDGWQSICHDEDPISDQEGMNRTVAGEQMPCRLLKFEENY 291 (777)
T ss_pred ceEEehhHhcccCCHHHHHHHHHHHHhCCCC---ccEEEEcCCcccccccCcccccccccccccccchhhhhhccccccc
Confidence 6999999999999999999999999887665 589999999997432211 1 12334
Q ss_pred --------CCCCCCCHHHHHHHHHhc--CCe-EEEEecC---------Cc--------ccc-------------------
Q 012852 151 --------TITFPSGIKALADYVHGK--GLK-LGIYSDA---------GV--------FTC------------------- 183 (455)
Q Consensus 151 --------~~~FP~Gl~~l~~~v~~~--G~k-~Glw~~p---------g~--------~~c------------------- 183 (455)
+..||.|||.+++.||++ |+| +|+|.+- +. ..+
T Consensus 292 KF~~~~~~~~~~p~Glk~~v~~iK~~~~~vk~VyVWHAL~GYWGGv~P~~~~~~~~~~~~p~~spg~~~~~~d~~~d~~~ 371 (777)
T PLN02711 292 KFRDYVSPKSLSNKGMGAFIRDLKEEFKTVDYVYVWHALCGYWGGLRPNVPGLPESKVVAPKLSPGLKMTMEDLAVDKIV 371 (777)
T ss_pred cccccccccCCCCCcHHHHHHHHHhhCCCCCEEEEeeeccCcccCcCCCCCCCccceeeccccCcccccccccccccccc
Confidence 344677999999999984 687 5999863 11 000
Q ss_pred -----CCCC-cccccHHhHHHHHHhcCCcEEEeecCCCCC-----C-CccchhHHHHHHHHhc------CCCeeEeeCCC
Q 012852 184 -----QVRP-GSLFHEKDDAPLFASWGVDYLKYDNCFNLG-----I-EPKKRYPPMRDALNET------GCSIFYSLCEW 245 (455)
Q Consensus 184 -----~~~P-g~~~~~~~~~~~~~~wGidylK~D~~~~~~-----~-~~~~~y~~m~~AL~~~------G~~i~~~~c~~ 245 (455)
..+| .++.+++.....|++.|||+||+|...... . ...+.-++..+||+++ ++.++-++|..
T Consensus 372 ~~g~glv~Pe~~~~FY~~~hs~Las~GVDgVKVDvQ~~Le~l~~~~Ggrv~la~ay~~ALe~S~~r~F~~ng~I~CMs~~ 451 (777)
T PLN02711 372 NNGVGLVPPELAYQMYEGLHSHLQSVGIDGVKVDVIHLLEMLCEEYGGRVELAKAYYKALTASVRKHFNGNGVIASMEHC 451 (777)
T ss_pred cCcccccCHHHHHHHHHHHHHHHHHcCCCeEEEchhhhHhhhcccCCcHHHHHHHHHHHHHHHHHHhCCCCCeEeecccC
Confidence 0112 246778888899999999999999875421 1 1122334556666532 34455444432
Q ss_pred CCCChh-hh-hhhccCeeeecCCCCCChhHH---------HHHHHhhcccccccCCCCcCCCCccccCCCCCCHHHHHHH
Q 012852 246 GVDDPA-LW-AGKVGNSWRTTGDINDTWASM---------TSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAH 314 (455)
Q Consensus 246 g~~~p~-~w-~~~~~~~~Ris~Di~~~W~~~---------~~~~~~~~~~~~~~g~g~~nDpDmL~vg~~~lT~~E~rt~ 314 (455)
+. .+ ..+....-|+|+|..+.=.+- ..++..+++-+-+.+...|+|.||++.-++ -.+.|
T Consensus 452 ----~d~~~~~tk~~av~R~SDDF~p~dP~sh~~g~~W~~~~Hi~~~AyNSLllg~~v~PDWDMF~S~Hp-----~A~~H 522 (777)
T PLN02711 452 ----NDFMFLGTEAISLGRVGDDFWCTDPSGDPNGTFWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHP-----CAEFH 522 (777)
T ss_pred ----chhhhccCcccceeeecccccCCCCccccccccccccceeeeehhhhhhhcccccCCchhhhccCc-----hHHHH
Confidence 22 22 234456789999988532210 012222333344556667999999997664 67899
Q ss_pred HHHHHHHhCceeecCCCCCCCHHHHHhhc--cHhHHhhccCCCCCccEE-eeec---CCCCceeEEEEEcCCCcEEEEEE
Q 012852 315 FSIWALMKAPLLIGCDVRNMTAETFEILS--NKEVIAVNQDPLGVQGRK-VYVS---GTDNCLQVWVGPLSGHRLVVALW 388 (455)
Q Consensus 315 ~slwa~~gsPL~is~Dl~~l~~~~~~lL~--N~e~iainQd~lG~~~r~-v~~~---~~~~~~~vw~~~l~dg~~avalf 388 (455)
.+..|++|+|+++||-+.+-+-+.+.-|. +-.|++.... |.+.|- ++.+ .+..-+.||...- +.-++++|
T Consensus 523 AaaRAisGGPIYVSD~pG~Hdf~LLk~LvlpdGsIlR~~~p--g~PtrDcLF~DP~~dg~slLKIwn~nk--~tGviG~F 598 (777)
T PLN02711 523 AASRAISGGPIYVSDSVGKHNFPLLKRLVLPDGSILRCQYY--ALPTRDCLFEDPLHDGKTMLKIWNLNK--FTGVIGAF 598 (777)
T ss_pred HHHHhhcCCCEEEecCCCCccHHHHHhhhCCCCcEecccCC--CCccchhhccccccCCceEEEEEeecC--CcceEEEE
Confidence 99999999999999988877666555332 2233333321 222221 0111 0113366787553 33489999
Q ss_pred ecCCCc-----------------eeEEEEceecCCCCC---------CceEEEEccCCccccccccceEEEEEcCCCEEE
Q 012852 389 NRCPKA-----------------ETITAQWDALGLESS---------TKVSVRDLWQHKQVTGDAVSSFGAQVDAHDCQM 442 (455)
Q Consensus 389 N~~~~~-----------------~~iti~l~~LGL~~~---------~~~~vrDlW~g~~~~g~~~~~l~~~L~pH~~~l 442 (455)
|-.... .+-.++.+|+..+.+ ..|.|+-.=+++-..-..+..++++|++-+..|
T Consensus 599 NcqgagW~~~~~~~~~~~~~~~~vt~~v~~~Dv~w~~~~~~~~~~~~~~y~vy~~~s~~l~~l~~~~~l~vtL~~~~~Ei 678 (777)
T PLN02711 599 NCQGGGWCRETRRNKCASQFSHTVTAKASPKDIEWNSGKSPISIEGVQVFAVYLFQSKKLVLSKPSENLEISLEPFNFEL 678 (777)
T ss_pred EecCCcccchhhhcccccCCCCceEEEEchHHhcccCCCCCcCccCceeEEEEEecCCeEEECCCCCceEEEecCcceEE
Confidence 974332 334456666633322 123344333443221223567999999999999
Q ss_pred EEEEeCCccC
Q 012852 443 YIFTPRTVTR 452 (455)
Q Consensus 443 l~ltp~~~~~ 452 (455)
|-+.|++...
T Consensus 679 ftv~Pv~~~~ 688 (777)
T PLN02711 679 ITVSPVTTLP 688 (777)
T ss_pred EEEeeeEEec
Confidence 9999987753
|
|
| >PLN02982 galactinol-raffinose galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl compounds | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.4e-18 Score=185.25 Aligned_cols=346 Identities=17% Similarity=0.174 Sum_probs=204.9
Q ss_pred eEEechhhhCcCCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCC-----------------C---------
Q 012852 93 MGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKG-----------------Q--------- 146 (455)
Q Consensus 93 ~gwnSW~~~~~~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G-----------------~--------- 146 (455)
.|||||.+||.+++++.|.+-.+.+++-|..+ .+++||||||....|.++ +
T Consensus 224 FGWCTWDAFY~~V~p~GV~~Gv~~l~~gG~pp---rfvIIDDGWQsi~~d~~~~~~~~~~~~~~g~q~~~RL~~~~En~K 300 (865)
T PLN02982 224 FGWCTWDAFYLTVDPVGVWHGVKEFAEGGVPP---RFLIIDDGWQSINFDGDNPNEDAKNLVLGGTQMTARLYRFDECEK 300 (865)
T ss_pred ceEEeechhhcccCHHHHHHHHHHHhcCCCCc---cEEEEecchhhccccccCCchhhhhccccccchhhhhhcchhhhh
Confidence 69999999999999999999999998776654 899999999975433111 0
Q ss_pred ---------cccCC------------------------------------------------------------------
Q 012852 147 ---------LVPDT------------------------------------------------------------------ 151 (455)
Q Consensus 147 ---------~~~d~------------------------------------------------------------------ 151 (455)
..+|+
T Consensus 301 Frky~~~~~~~~~~~~f~~~~~~~~i~~~~~~~~a~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 380 (865)
T PLN02982 301 FRNYKGGSMLGPDPPHFDPKKPKMLIYKAIEREHAEKARKKAIESGVTDLSEFDAKIKQLKKELDAMFDGEEKSVSSESE 380 (865)
T ss_pred hhccccccccCCCcccccccccchhhhcccchhhhhhcccccccccccccchhhhhhhhhhhhccccccccccccccccc
Confidence 00111
Q ss_pred -----CCCCCCHHHHHHHHHhc--CCe-EEEEecC---------Ccc-------cc------------------------
Q 012852 152 -----ITFPSGIKALADYVHGK--GLK-LGIYSDA---------GVF-------TC------------------------ 183 (455)
Q Consensus 152 -----~~FP~Gl~~l~~~v~~~--G~k-~Glw~~p---------g~~-------~c------------------------ 183 (455)
+.=|.|||.+++.||.+ |+| +++|.+- +.. .+
T Consensus 381 ~~~~~~~~~~Glk~~v~~ik~k~~~vk~VyVWHAL~GYWGGV~P~~~~y~~k~~~p~~spg~~~~~~d~a~d~i~~~G~g 460 (865)
T PLN02982 381 SSGSCKVSGSGMKAFTRDLRTKFKGLDDIYVWHALCGAWGGVRPGTTHLNAKVVPARLSPGLDGTMNDLAVDKIVEGGIG 460 (865)
T ss_pred cccccccCcccHHHHHHHHHHhCCCCCEEEEeeeccCcccCcCCCCCCCcceEEecccCccccccCcchhhhheecCcee
Confidence 12235999999999875 465 5888853 210 00
Q ss_pred CCCCc-ccccHHhHHHHHHhcCCcEEEeecCCCCCC-----C-ccchhHHHHHHHH----hc--CCCeeEeeCCCCCCCh
Q 012852 184 QVRPG-SLFHEKDDAPLFASWGVDYLKYDNCFNLGI-----E-PKKRYPPMRDALN----ET--GCSIFYSLCEWGVDDP 250 (455)
Q Consensus 184 ~~~Pg-~~~~~~~~~~~~~~wGidylK~D~~~~~~~-----~-~~~~y~~m~~AL~----~~--G~~i~~~~c~~g~~~p 250 (455)
.-+|. +..+++.....|++.|||+||+|....... . ..+..++..+||. +. ++.++-++|+.+ .
T Consensus 461 lv~P~~~~~FYd~~hsyLas~GVDgVKVDvQ~~Le~L~~~~ggRv~La~ay~~al~~Sv~r~F~~ng~I~CM~~~~---~ 537 (865)
T PLN02982 461 LVHPSQAGDFYDSMHSYLASVGITGVKVDVIHTLEYVCEEYGGRVELAKAYYDGLSESLAKNFNGTGIIASMQQCN---D 537 (865)
T ss_pred ccCHHHHHHHHHHHHHHHHHcCCCeEEEchhhhHHHhhccCCcHHHHHHHHHHHHHHHHHHhCCCCCeEeecccCc---h
Confidence 01232 467888889999999999999998764211 1 1222234444443 32 333444433321 1
Q ss_pred hhh-hhhccCeeeecCCCCCC------hhHH---HHHHHhhcccccccCCCCcCCCCccccCCCCCCHHHHHHHHHHHHH
Q 012852 251 ALW-AGKVGNSWRTTGDINDT------WASM---TSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWAL 320 (455)
Q Consensus 251 ~~w-~~~~~~~~Ris~Di~~~------W~~~---~~~~~~~~~~~~~~g~g~~nDpDmL~vg~~~lT~~E~rt~~slwa~ 320 (455)
..| ..+...+-|+|+|..+. |... ..++..++.-+-+.|...|+|.||++..++ -.+.|.+..|+
T Consensus 538 ~~~~~tk~sav~R~SDDF~p~dP~shp~g~~wlq~~Hi~~~AyNSLl~G~~v~PDWDMFqS~H~-----~A~fHAaaRAI 612 (865)
T PLN02982 538 FFFLGTKQISMGRVGDDFWFQDPNGDPMGVYWLQGVHMIHCAYNSMWMGQIIQPDWDMFQSDHL-----CAEFHAGSRAI 612 (865)
T ss_pred hhhccCCcceeeeccccccCCCCCcCccccccccceeeeehhhhhHhhccccccCchhccccCc-----hHHHHHHHHhh
Confidence 233 23456677999998863 3211 012222222234556668999999987554 67899999999
Q ss_pred HhCceeecCCCCCCCHHHHHhhccH--hHHhhccCCCCCccEEe-eecC---CCCceeEEEEEcCCCcEEEEEEecCCC-
Q 012852 321 MKAPLLIGCDVRNMTAETFEILSNK--EVIAVNQDPLGVQGRKV-YVSG---TDNCLQVWVGPLSGHRLVVALWNRCPK- 393 (455)
Q Consensus 321 ~gsPL~is~Dl~~l~~~~~~lL~N~--e~iainQd~lG~~~r~v-~~~~---~~~~~~vw~~~l~dg~~avalfN~~~~- 393 (455)
+|+|+++||-+.+-+-+.+.=|.-+ .|++.... |.+-|-. +.+. ...-+.||-..--.| +|++||--+.
T Consensus 613 sGGPIYvSD~pG~Hdf~lLk~LvlpDG~IlR~~~p--g~PTrDcLF~DPl~DGks~LKIWN~Nk~~G--ViG~FNCQGag 688 (865)
T PLN02982 613 CGGPVYVSDSVGGHDFDLLKKLVFPDGTIPRCQHY--ALPTRDCLFKNPLFDKKTILKIWNFNKFGG--VIGAFNCQGAG 688 (865)
T ss_pred cCCCEEEeeCCCCccHHHHHhhhcCCCceeccCCC--CCCCcchhccCcccCCceEEEEEeccCcCc--eEEEEEeccCC
Confidence 9999999998887766655543322 23332221 2111111 1110 012255665332223 6777773221
Q ss_pred --------------cee--EEEEceecCCCC---------CCceEEEEccCCccccccc-cceEEEEEcCCCEEEEEEEe
Q 012852 394 --------------AET--ITAQWDALGLES---------STKVSVRDLWQHKQVTGDA-VSSFGAQVDAHDCQMYIFTP 447 (455)
Q Consensus 394 --------------~~~--iti~l~~LGL~~---------~~~~~vrDlW~g~~~~g~~-~~~l~~~L~pH~~~ll~ltp 447 (455)
+.+ -++..+|+.... ...+.|+..=+++-+.-.. ...++++|.+-...||.+.|
T Consensus 689 W~~~~~~~~~~~~~~~~vtg~v~~~Dve~~~~~~~a~~~~~~~~~vY~~~~~el~~~~~~~~~~~vtL~~~e~elftv~P 768 (865)
T PLN02982 689 WDPKEHRIKGYSECYKPVSGSVHVSDIEWDQKPEASQMGEAEEYAVYLNQAEELLLMTPKSEAIQITLQPSSFELFSFVP 768 (865)
T ss_pred CCchhccccccCCCCcceEEEEcHHHcccccccccccCCCcccEEEEEecCceEEEecCCCCcceEEeccceeEEEEEee
Confidence 222 334445553321 1234455533333221012 35689999999999999999
Q ss_pred CCccCC
Q 012852 448 RTVTRS 453 (455)
Q Consensus 448 ~~~~~~ 453 (455)
++...+
T Consensus 769 I~~~~~ 774 (865)
T PLN02982 769 VTKLGS 774 (865)
T ss_pred eEEccC
Confidence 987644
|
|
| >cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.6e-16 Score=159.80 Aligned_cols=168 Identities=18% Similarity=0.370 Sum_probs=125.0
Q ss_pred CCCceEEechhhhCcCCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCcccCCCCCCCCHHHHHHHHHhc
Q 012852 89 STPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIKALADYVHGK 168 (455)
Q Consensus 89 ~~pP~gwnSW~~~~~~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~~~d~~~FP~Gl~~l~~~v~~~ 168 (455)
-++|+ ||||+.+++.+|++.|+++|+.+++.|+ .++.|+||++|+. ..|+|+.|+++||+ ++.++++||++
T Consensus 12 ~~~p~-W~~W~~~~~~~s~~~v~~~~~~~~~~~i---P~d~i~iD~~w~~----~~g~f~~d~~~FPd-p~~mi~~l~~~ 82 (303)
T cd06592 12 FRSPI-WSTWARYKADINQETVLNYAQEIIDNGF---PNGQIEIDDNWET----CYGDFDFDPTKFPD-PKGMIDQLHDL 82 (303)
T ss_pred hCCCc-cCChhhhccCcCHHHHHHHHHHHHHcCC---CCCeEEeCCCccc----cCCccccChhhCCC-HHHHHHHHHHC
Confidence 44566 9999999999999999999999987554 4799999999986 36889999999998 99999999999
Q ss_pred CCeEEEEecCCcc--------------------------------cc----CCCCcccccHHhHHHHHH-hcCCcEEEee
Q 012852 169 GLKLGIYSDAGVF--------------------------------TC----QVRPGSLFHEKDDAPLFA-SWGVDYLKYD 211 (455)
Q Consensus 169 G~k~Glw~~pg~~--------------------------------~c----~~~Pg~~~~~~~~~~~~~-~wGidylK~D 211 (455)
|+|+++|+.|... .| .++|++++++...++.+. ++|||++|+|
T Consensus 83 G~k~~l~i~P~i~~~s~~~~e~~~~g~~vk~~~g~~~~~~~~w~g~~~~~Dftnp~a~~w~~~~~~~~~~~~Gvdg~w~D 162 (303)
T cd06592 83 GFRVTLWVHPFINTDSENFREAVEKGYLVSEPSGDIPALTRWWNGTAAVLDFTNPEAVDWFLSRLKSLQEKYGIDSFKFD 162 (303)
T ss_pred CCeEEEEECCeeCCCCHHHHhhhhCCeEEECCCCCCCcccceecCCcceEeCCCHHHHHHHHHHHHHHHHHhCCcEEEeC
Confidence 9999999999421 01 467888888877776655 9999999999
Q ss_pred cCCCCCCC----------ccchhH-HHHHHHHhcCCCeeEeeCCCCCCChhhhhhhccCeeeecCCCCCChhHH
Q 012852 212 NCFNLGIE----------PKKRYP-PMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDTWASM 274 (455)
Q Consensus 212 ~~~~~~~~----------~~~~y~-~m~~AL~~~G~~i~~~~c~~g~~~p~~w~~~~~~~~Ris~Di~~~W~~~ 274 (455)
++...... ....|. .+.++..+.+ +++++=+.|... ..++-.| ++|...+|+..
T Consensus 163 ~~E~~~~p~~~~~~~~~~~~n~y~~~~~~~~~~~~-~~~~~Rsg~~g~------~~~~~~w--~GD~~s~W~~~ 227 (303)
T cd06592 163 AGEASYLPQDYVTEDPLLNPDEYTRLYAEMVAEFG-DLIEVRAGWRSQ------GLPLFVR--MMDKDSSWGGD 227 (303)
T ss_pred CCCcccCCcccccCCcccCHHHHHHHHHHHHHhhc-cceEEEeeeecC------CCCeeEE--cCCCCCCCCCC
Confidence 98753110 112232 4455544444 566654433211 1234455 77999999875
|
Orthologs of KIA1161 are found in eukaryotes and prokaryotes. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. |
| >cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.6e-12 Score=129.50 Aligned_cols=169 Identities=20% Similarity=0.287 Sum_probs=121.5
Q ss_pred hhhhCcCCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCcccCCCCCCCCHHHHHHHHHhcCCeEEEEec
Q 012852 98 WNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSD 177 (455)
Q Consensus 98 W~~~~~~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~~~d~~~FP~Gl~~l~~~v~~~G~k~Glw~~ 177 (455)
|..-+...+++.+++.|+.+++.|+ .++.|+||++|+.. ...|+|..|+++||+ ++.+++.+|++|+++++|+.
T Consensus 14 ~~~~~~y~~~~~v~~~~~~~~~~~i---P~d~~~lD~~w~~~--~~~~~f~~d~~~FPd-~~~~i~~l~~~G~~~~~~~~ 87 (308)
T cd06593 14 WLSRSFYYDEEEVNEFADGMRERNL---PCDVIHLDCFWMKE--FQWCDFEFDPDRFPD-PEGMLSRLKEKGFKVCLWIN 87 (308)
T ss_pred HHHcccCCCHHHHHHHHHHHHHcCC---CeeEEEEecccccC--CcceeeEECcccCCC-HHHHHHHHHHCCCeEEEEec
Confidence 3344445899999999999976443 37889999999852 223589999999998 99999999999999999999
Q ss_pred CCccc--------------------------------c---CCCCcccccHHhHHHHHHhcCCcEEEeecCCCCCC----
Q 012852 178 AGVFT--------------------------------C---QVRPGSLFHEKDDAPLFASWGVDYLKYDNCFNLGI---- 218 (455)
Q Consensus 178 pg~~~--------------------------------c---~~~Pg~~~~~~~~~~~~~~wGidylK~D~~~~~~~---- 218 (455)
|.... + .++|++.+++....+.+.++|||++|+|++.....
T Consensus 88 P~i~~~~~~~~e~~~~g~~v~~~~g~~~~~~~w~g~~~~~Dftnp~a~~w~~~~~~~~~~~Gid~~~~D~~e~~p~~~~~ 167 (308)
T cd06593 88 PYIAQKSPLFKEAAEKGYLVKKPDGSVWQWDLWQPGMGIIDFTNPDACKWYKDKLKPLLDMGVDCFKTDFGERIPTDVVY 167 (308)
T ss_pred CCCCCCchhHHHHHHCCeEEECCCCCeeeecccCCCcccccCCCHHHHHHHHHHHHHHHHhCCcEEecCCCCCCCccccc
Confidence 85310 0 36788889998888888899999999999864211
Q ss_pred ----Cc---cchh-----HHHHHHHHhc-C--CCeeEeeCCCCCCChhhhhhhccCeeeecCCCCCChhHHHHHHHh
Q 012852 219 ----EP---KKRY-----PPMRDALNET-G--CSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDTWASMTSIADI 280 (455)
Q Consensus 219 ----~~---~~~y-----~~m~~AL~~~-G--~~i~~~~c~~g~~~p~~w~~~~~~~~Ris~Di~~~W~~~~~~~~~ 280 (455)
.+ ...| +.+.+++++. + |+++++-+.+... ..|+-.| ++|...+|+.+...+..
T Consensus 168 ~~g~~~~~~hn~y~~~~~~~~~~~~~~~~~~~r~~~~~Rs~~~Gs------qry~~~w--~GD~~s~w~~L~~~i~~ 236 (308)
T cd06593 168 YDGSDGEKMHNYYALLYNKAVYEATKEVKGEGEAVVWARSAWAGS------QKYPVHW--GGDCESTFEGMAESLRG 236 (308)
T ss_pred cCCCCcceeeeHHHHHHHHHHHHHHHHhcCCCCeEEEEcCCcccc------ccCCCEE--CCCcccCHHHHHHHHHH
Confidence 11 1222 2344555543 3 4777764443211 2455567 88999999987766543
|
YicI forms a homohexamer (a trimer of dimers). All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The YicI family corresponds to subgroup 4 in the Ernst et al classification of GH31 enzymes. |
| >cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase | Back alignment and domain information |
|---|
Probab=99.30 E-value=6.6e-11 Score=116.92 Aligned_cols=159 Identities=21% Similarity=0.260 Sum_probs=115.9
Q ss_pred chhhhCcCCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCc--ccCCCCCCCCHHHHHHHHHhcCCeEEE
Q 012852 97 SWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQL--VPDTITFPSGIKALADYVHGKGLKLGI 174 (455)
Q Consensus 97 SW~~~~~~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~--~~d~~~FP~Gl~~l~~~v~~~G~k~Gl 174 (455)
.|...+...+++.+++.|+.+.+.++ .++.|+||++|+.. .|++ ..|+++||+ ++.+++++|++|+|+.+
T Consensus 13 ~~~~~~~~~~~~~v~~~~~~~~~~~i---P~d~~~lD~~~~~~----~~~f~~~~d~~~Fpd-p~~~i~~l~~~g~~~~~ 84 (265)
T cd06589 13 YWLSRYGYGDQDKVLEVIDGMRENDI---PLDGFVLDDDYTDG----YGDFTFDWDAGKFPN-PKSMIDELHDNGVKLVL 84 (265)
T ss_pred HHHhcCCCCCHHHHHHHHHHHHHcCC---CccEEEECcccccC----CceeeeecChhhCCC-HHHHHHHHHHCCCEEEE
Confidence 55555567899999999999988554 47999999999973 3455 999999999 99999999999999999
Q ss_pred EecCCccccCCCCcccccHHhHHHH-HHhcCCcEEEeecCCCCCCCc----------------cchhH-----HHHHHHH
Q 012852 175 YSDAGVFTCQVRPGSLFHEKDDAPL-FASWGVDYLKYDNCFNLGIEP----------------KKRYP-----PMRDALN 232 (455)
Q Consensus 175 w~~pg~~~c~~~Pg~~~~~~~~~~~-~~~wGidylK~D~~~~~~~~~----------------~~~y~-----~m~~AL~ 232 (455)
|+.|.. .++....++. +.+.|||++|.|++....... ...|. .+.++++
T Consensus 85 ~~~P~v---------~~w~~~~~~~~~~~~Gvdg~w~D~~E~~~~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~~~~~ 155 (265)
T cd06589 85 WIDPYI---------REWWAEVVKKLLVSLGVDGFWTDMGEPSPGDGNIFTGGVVGRVKHEEMHNAYPLLYAEATYEALR 155 (265)
T ss_pred EeChhH---------HHHHHHHHHHhhccCCCCEEeccCCCCCcCCCccccCCcCCCccHHHHcchhHHHHHHHHHHHHH
Confidence 999975 5666555554 489999999999986542110 11222 3345554
Q ss_pred hc---CCCeeEeeCCCCCCChhhhhhhccCeeeecCCCCCChhHHHHHHHh
Q 012852 233 ET---GCSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDTWASMTSIADI 280 (455)
Q Consensus 233 ~~---G~~i~~~~c~~g~~~p~~w~~~~~~~~Ris~Di~~~W~~~~~~~~~ 280 (455)
+. .|+++++-+.+... ..++-.| ++|+..+|+.+...+..
T Consensus 156 ~~~~~~r~~~~sRs~~~Gs------qry~~~W--~GD~~stW~~l~~~i~~ 198 (265)
T cd06589 156 KNSKNKRPFILSRSGYAGS------QRYAGMW--SGDNTSTWGYLRSQIPA 198 (265)
T ss_pred HhcCCCCeEEEEcCCcccc------cCcCcee--CCcccCCHHHHHHHHHH
Confidence 33 36777765544221 2555666 78999999987666543
|
All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. In most cases, the pyranose moiety recognized in subsite -1 of the substrate binding site is an alpha-D-glucose, though some GH31 family members show a preference for alpha-D-xylose. Several GH31 enzymes can accommodate both glucose and xylose and different levels of discrimination between the two have been observed. Most characterized GH31 enzymes are alpha-glucosidases. In mammals, GH31 members with alpha-glucosidase activity are implicated in at least three distinct biological processes |
| >PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.24 E-value=4.4e-11 Score=117.98 Aligned_cols=214 Identities=16% Similarity=0.185 Sum_probs=117.0
Q ss_pred CCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCcc-cCCCCCCCCHHHHHHHHHhcCCeEEEEecCCccc
Q 012852 104 NISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLV-PDTITFPSGIKALADYVHGKGLKLGIYSDAGVFT 182 (455)
Q Consensus 104 ~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~~-~d~~~FP~Gl~~l~~~v~~~G~k~Glw~~pg~~~ 182 (455)
.+|.+..++.+|++ +++|++|+.||+||.....+...+.. +.+. .-|+.|++|.++||.++-||..-....
T Consensus 28 g~~t~~~k~yIDfA-----a~~G~eYvlvD~GW~~~~~~~~~d~~~~~~~---~dl~elv~Ya~~KgVgi~lw~~~~~~~ 99 (273)
T PF10566_consen 28 GATTETQKRYIDFA-----AEMGIEYVLVDAGWYGWEKDDDFDFTKPIPD---FDLPELVDYAKEKGVGIWLWYHSETGG 99 (273)
T ss_dssp SSSHHHHHHHHHHH-----HHTT-SEEEEBTTCCGS--TTT--TT-B-TT-----HHHHHHHHHHTT-EEEEEEECCHTT
T ss_pred CCCHHHHHHHHHHH-----HHcCCCEEEeccccccccccccccccccCCc---cCHHHHHHHHHHcCCCEEEEEeCCcch
Confidence 68999999999999 67999999999999853333333322 2211 249999999999999999999764310
Q ss_pred cCCCCcccccHHhHHHHHHhcCCcEEEeecCCCCCCCccchhHHHHHHHHhcCCCeeEeeCCCCCCChhhhhhhccCeee
Q 012852 183 CQVRPGSLFHEKDDAPLFASWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSWR 262 (455)
Q Consensus 183 c~~~Pg~~~~~~~~~~~~~~wGidylK~D~~~~~~~~~~~~y~~m~~AL~~~G~~i~~~~c~~g~~~p~~w~~~~~~~~R 262 (455)
- .......++..++++++|||..||+||...++......|..+.+. ++.+.+++.++. ...|..+.+.|-|.+-
T Consensus 100 ~--~~~~~~~~~~~f~~~~~~Gv~GvKidF~~~d~Q~~v~~y~~i~~~--AA~~~LmvnfHg--~~kPtG~~RTyPN~mT 173 (273)
T PF10566_consen 100 N--VANLEKQLDEAFKLYAKWGVKGVKIDFMDRDDQEMVNWYEDILED--AAEYKLMVNFHG--ATKPTGLRRTYPNLMT 173 (273)
T ss_dssp B--HHHHHCCHHHHHHHHHHCTEEEEEEE--SSTSHHHHHHHHHHHHH--HHHTT-EEEETT--S---TTHHHCSTTEEE
T ss_pred h--hHhHHHHHHHHHHHHHHcCCCEEeeCcCCCCCHHHHHHHHHHHHH--HHHcCcEEEecC--CcCCCcccccCccHHH
Confidence 0 000123357789999999999999999988655445555544443 567889999874 4457777666666651
Q ss_pred ecCCCC----CChh---HHH-HHHHhhcccccccCCCCcCCCCcccc------CCCCCCHHHHHHHHHHHHHHhCceeec
Q 012852 263 TTGDIN----DTWA---SMT-SIADINDKWASYAGPGGWNDPDMLEV------GNGGMSYQEYRAHFSIWALMKAPLLIG 328 (455)
Q Consensus 263 is~Di~----~~W~---~~~-~~~~~~~~~~~~~g~g~~nDpDmL~v------g~~~lT~~E~rt~~slwa~~gsPL~is 328 (455)
--. +. ..|. ... .+-...-..+.++||..|.-.=|-.. ..........-.++++..++-|||..-
T Consensus 174 ~Eg-VrG~E~~~~~~~~~~~p~h~~~lPFTR~l~GpmDyTPg~f~~~~~~~~~~~~~~~~tT~ahQLAl~Vv~~Splq~~ 252 (273)
T PF10566_consen 174 REG-VRGQEYNKWSGDGGNPPEHNTTLPFTRMLAGPMDYTPGAFSNRTPFDPNYPNPRVQTTRAHQLALYVVFESPLQML 252 (273)
T ss_dssp E---S--GGGGGTT-TTS-HCCHHCTCCCTCCCCS-B------SSEEGCGT-TTSS-BECS-HHHHHHHHHHS--SEEEE
T ss_pred HHH-hhhhhhcccccCCCCCCcceeeccchhcCcCCcccCChhcccccccccCCCCCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 110 11 1122 000 00001122344566654432222110 011111223667899999999999988
Q ss_pred CCCC
Q 012852 329 CDVR 332 (455)
Q Consensus 329 ~Dl~ 332 (455)
+|.+
T Consensus 253 aD~P 256 (273)
T PF10566_consen 253 ADSP 256 (273)
T ss_dssp -S-H
T ss_pred hcCH
Confidence 7764
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is the 97th family of glycosidases, in this case bacterial. The central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-terminal parts of the sequences, mainly consisting of beta-strands, most probably form two additional non-catalytic domains with as yet unknown functions. The non-catalytic domains of glycosidases from the alpha-galactosidase and alpha-glucosidase superfamilies are also predominantly composed of beta-strands, and at least some of these domains are involved in oligomerisation and carbohydrate binding. In all known glycosidases with the (beta-alpha)8-barrel fold, the amino acid residues at the active site are located on the C-termini of the beta-strands []. ; PDB: 2JKP_A 2JKE_A 2D73_B 2ZQ0_B 2JKA_A 3A24_A. |
| >cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37 | Back alignment and domain information |
|---|
Probab=99.21 E-value=4e-10 Score=114.22 Aligned_cols=165 Identities=16% Similarity=0.190 Sum_probs=117.2
Q ss_pred CCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCcccCCCCCCCCHHHHHHHHHhcCCeEEEEecCCccc-
Q 012852 104 NISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFT- 182 (455)
Q Consensus 104 ~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~~~d~~~FP~Gl~~l~~~v~~~G~k~Glw~~pg~~~- 182 (455)
+.++++|++.|+.+.+.++ -++.|.||++|+.......+++..|+++||+ .+.|++.||++|+|+-+|+.|....
T Consensus 25 ~~~q~~v~~~~~~~r~~~i---P~d~i~ld~~~~~~~~~~~~~f~~d~~~FPd-p~~mi~~L~~~g~k~~~~i~P~i~~~ 100 (317)
T cd06599 25 PDAQEALLEFIDKCREHDI---PCDSFHLSSGYTSIEGGKRYVFNWNKDRFPD-PAAFVAKFHERGIRLAPNIKPGLLQD 100 (317)
T ss_pred ccHHHHHHHHHHHHHHcCC---CeeEEEEeccccccCCCceeeeecCcccCCC-HHHHHHHHHHCCCEEEEEeCCcccCC
Confidence 4569999999999988554 4799999999987322233568889999998 9999999999999999999985310
Q ss_pred --------------------------c---------CCCCcccccHHhHH-HHHHhcCCcEEEeecCCCCCC--------
Q 012852 183 --------------------------C---------QVRPGSLFHEKDDA-PLFASWGVDYLKYDNCFNLGI-------- 218 (455)
Q Consensus 183 --------------------------c---------~~~Pg~~~~~~~~~-~~~~~wGidylK~D~~~~~~~-------- 218 (455)
+ .++|++.++....+ +.+.+.|||++|.|++.....
T Consensus 101 ~~~y~e~~~~g~~v~~~~g~~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~~Gvdg~w~D~~E~~~~~~~~~~~~ 180 (317)
T cd06599 101 HPRYKELKEAGAFIKPPDGREPSIGQFWGGVGSFVDFTNPEGREWWKEGVKEALLDLGIDSTWNDNNEYEIWDDDAVCDG 180 (317)
T ss_pred CHHHHHHHHCCcEEEcCCCCCcceecccCCCeEeecCCChHHHHHHHHHHHHHHhcCCCcEEEecCCCCccCCCcceecC
Confidence 0 35788888887666 778899999999999964210
Q ss_pred C--c------cchhH-----HHHHHHHhc---CCCeeEeeCCCCCCChhhhhhhccCeeeecCCCCCChhHHHHHHHh
Q 012852 219 E--P------KKRYP-----PMRDALNET---GCSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDTWASMTSIADI 280 (455)
Q Consensus 219 ~--~------~~~y~-----~m~~AL~~~---G~~i~~~~c~~g~~~p~~w~~~~~~~~Ris~Di~~~W~~~~~~~~~ 280 (455)
. + ...|. ...+++++. .|+++++=+.+.. ...|+-.| ++|+..+|+.+...+..
T Consensus 181 ~g~~~~~~~~~n~y~~l~~~a~~~~~~~~~~~~r~f~ltRs~~~G------~qry~~~W--sGD~~s~W~~L~~~i~~ 250 (317)
T cd06599 181 FGKPGTIGELRPVQPNLMARASHEAQAEHYPNRRPYIVSRSGFAG------IQRYAQTW--SGDNRTSWKTLRYNIAM 250 (317)
T ss_pred CCCccchhhcccchHHHHHHHHHHHHHHhCCCCCcEEEEcCCccc------ccCCcCee--CCCcccCHHHHHHHHHH
Confidence 0 0 11221 334455443 3567765443321 12456677 88999999987666543
|
The gene encoding Aec37 (aec-37) is located within a genomic island (AGI-3) isolated from the extraintestinal avian pathogenic Escherichia coli strain BEN2908. The function of Aec37 and its orthologs is unknown; however, deletion of a region of the genome that includes aec-37 affects the assimilation of seven carbohydrates, decreases growth rate of the strain in minimal medium containing galacturonate or trehalose, and attenuates the virulence of E. coli BEN2908 in chickens. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. |
| >cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.9e-09 Score=109.40 Aligned_cols=165 Identities=16% Similarity=0.181 Sum_probs=118.6
Q ss_pred CCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCC--CCCCCcccCCCCCCCCHHHHHHHHHhcCCeEEEEecCCcc
Q 012852 104 NISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLR--DLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVF 181 (455)
Q Consensus 104 ~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~r--d~~G~~~~d~~~FP~Gl~~l~~~v~~~G~k~Glw~~pg~~ 181 (455)
.-+++.+++.++.+.+.++ .++.|+||.+|+.... ...|++..|+++||+ .+.+++++|++|+|+-+|+.|...
T Consensus 20 y~~~~~v~~~~~~~~~~~i---P~d~i~lD~~w~~~~~~~~~~~~f~wd~~~FPd-p~~mi~~L~~~G~k~~~~v~P~v~ 95 (317)
T cd06598 20 YRNWQEVDDTIKTLREKDF---PLDAAILDLYWFGKDIDKGHMGNLDWDRKAFPD-PAGMIADLAKKGVKTIVITEPFVL 95 (317)
T ss_pred CCCHHHHHHHHHHHHHhCC---CceEEEEechhhcCcccCCceeeeEeccccCCC-HHHHHHHHHHcCCcEEEEEcCccc
Confidence 3589999999999988554 4799999999987332 245789999999998 999999999999999999998531
Q ss_pred c------------------------------------cCCCCcccccHHhHHHHHHhcCCcEEEeecCCCCCC-------
Q 012852 182 T------------------------------------CQVRPGSLFHEKDDAPLFASWGVDYLKYDNCFNLGI------- 218 (455)
Q Consensus 182 ~------------------------------------c~~~Pg~~~~~~~~~~~~~~wGidylK~D~~~~~~~------- 218 (455)
. ..++|++++++.+..+.+.+.|||++|.|+|.....
T Consensus 96 ~~~~~y~e~~~~g~l~~~~~~~~~~~~~~w~g~~~~~Dftnp~a~~w~~~~~~~~~~~Gvdg~w~D~~Ep~~~~~~~~~~ 175 (317)
T cd06598 96 KNSKNWGEAVKAGALLKKDQGGVPTLFDFWFGNTGLIDWFDPAAQAWFHDNYKKLIDQGVTGWWGDLGEPEVHPPDMCHH 175 (317)
T ss_pred CCchhHHHHHhCCCEEEECCCCCEeeeeccCCCccccCCCCHHHHHHHHHHHHHhhhCCccEEEecCCCccccCCccccC
Confidence 0 135788889888888888999999999999964211
Q ss_pred --C---ccchhH-----HHHHHHHhc---CCCeeEeeCCCCCCChhhhhhhccC-eeeecCCCCCChhHHHHHHHh
Q 012852 219 --E---PKKRYP-----PMRDALNET---GCSIFYSLCEWGVDDPALWAGKVGN-SWRTTGDINDTWASMTSIADI 280 (455)
Q Consensus 219 --~---~~~~y~-----~m~~AL~~~---G~~i~~~~c~~g~~~p~~w~~~~~~-~~Ris~Di~~~W~~~~~~~~~ 280 (455)
. ....|. ...+++++. .|+++++=+.+.. ...|+. .| ++|+..+|+.+...+..
T Consensus 176 ~g~~~~~hN~y~~~~~~~~~e~~~~~~~~~r~~~~~Rs~~~G------sqry~~~~W--sGD~~s~W~~L~~~i~~ 243 (317)
T cd06598 176 KGKAAEVHNIYGHLWAKSIYEGYQQNYPNERPFILMRAGFAG------SQRYGVIPW--SGDVGRTWDGLKSQPNA 243 (317)
T ss_pred CCcHhHHhhHHHHHHHHHHHHHHHHhcCCCCeEEEEecCcCc------cccCcCCcc--CCCCcCCHHHHHHHHHH
Confidence 0 011232 234455432 4667665443211 124543 46 78999999988766643
|
CtsZ and CtsY both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. |
| >cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.4e-09 Score=111.35 Aligned_cols=160 Identities=19% Similarity=0.202 Sum_probs=115.3
Q ss_pred CCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCcccCCCCCCCCHHHHHHHHHhcCCeEEEEecCCccc-
Q 012852 104 NISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFT- 182 (455)
Q Consensus 104 ~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~~~d~~~FP~Gl~~l~~~v~~~G~k~Glw~~pg~~~- 182 (455)
.-+++.|++.++.+.+.++ -++.|.||.+|+. ..+++..|+++||+ .+.+++.+|++|+|+-+|+.|....
T Consensus 20 y~~~~~v~~~~~~~~~~~i---P~d~i~lD~~~~~----~~~~f~~d~~~fPd-p~~m~~~l~~~g~~~~~~~~P~v~~~ 91 (339)
T cd06604 20 YYPEEEVREIADEFRERDI---PCDAIYLDIDYMD----GYRVFTWDKERFPD-PKELIKELHEQGFKVVTIIDPGVKVD 91 (339)
T ss_pred CCCHHHHHHHHHHHHHhCC---CcceEEECchhhC----CCCceeeccccCCC-HHHHHHHHHHCCCEEEEEEeCceeCC
Confidence 3589999999999988554 4799999999986 35678999999998 9999999999999999999874210
Q ss_pred ---------------------------c---------CCCCcccccHHhHHHHHHhcCCcEEEeecCCCCCC--------
Q 012852 183 ---------------------------C---------QVRPGSLFHEKDDAPLFASWGVDYLKYDNCFNLGI-------- 218 (455)
Q Consensus 183 ---------------------------c---------~~~Pg~~~~~~~~~~~~~~wGidylK~D~~~~~~~-------- 218 (455)
| .++|.+.++..+..+.+.+.|||++|.|++.....
T Consensus 92 ~~~~~~~e~~~~g~~v~~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~Gvdg~w~D~~Ep~~~~~~~~~~~ 171 (339)
T cd06604 92 PGYDVYEEGLENDYFVKDPDGELYIGRVWPGLSAFPDFTNPKVREWWGSLYKKFVDLGVDGIWNDMNEPAVFNTPGKTTM 171 (339)
T ss_pred CCChHHHHHHHCCeEEECCCCCEEEEEecCCCccccCCCChHHHHHHHHHHHHHhhCCCceEeecCCCccccCCcccccC
Confidence 1 35777888887777888899999999999853210
Q ss_pred -------------Cc---cchhH-----HHHHHHHhc---CCCeeEeeCCCCCCChhhhhhhccCeeeecCCCCCChhHH
Q 012852 219 -------------EP---KKRYP-----PMRDALNET---GCSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDTWASM 274 (455)
Q Consensus 219 -------------~~---~~~y~-----~m~~AL~~~---G~~i~~~~c~~g~~~p~~w~~~~~~~~Ris~Di~~~W~~~ 274 (455)
.. ...|. ...+++++. .|+++++=+.+... ..++-.| ++|...+|+.+
T Consensus 172 p~~~~~~~~~~~~~~~~~hn~y~~~~~~a~~~~~~~~~~~~r~~~~sRs~~~G~------qry~~~W--~GD~~ssW~~L 243 (339)
T cd06604 172 PRDAVHRLDGGGGTHEEVHNVYGLLMARATYEGLKKARPNERPFILTRAGYAGI------QRYAAVW--TGDNRSSWEHL 243 (339)
T ss_pred CccceeeCCCCCCcHhHhcchhhHHHHHHHHHHHHHhCCCCCcEEEEecccccc------ccccccc--CCcccCCHHHH
Confidence 00 11232 234455443 36777754433211 2445566 78999999987
Q ss_pred HHHHH
Q 012852 275 TSIAD 279 (455)
Q Consensus 275 ~~~~~ 279 (455)
...+.
T Consensus 244 ~~~i~ 248 (339)
T cd06604 244 RLSIP 248 (339)
T ss_pred HHHHH
Confidence 66554
|
Alpha-glucosidase II has been characterized in Bacillus thermoamyloliquefaciens where it forms a homohexamer. This family also includes the MalA alpha-glucosidase from Sulfolobus sulfataricus and the AglA alpha-glucosidase from Picrophilus torridus. MalA is part of the carbohydrate-metabolizing machinery that allows this organism to utilize carbohydrates, such as maltose, as the sole carbon and energy source. |
| >PRK10658 putative alpha-glucosidase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=4.1e-09 Score=116.35 Aligned_cols=165 Identities=21% Similarity=0.301 Sum_probs=120.1
Q ss_pred hCcCCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCcccCCCCCCCCHHHHHHHHHhcCCeEEEEecCCc
Q 012852 101 FACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGV 180 (455)
Q Consensus 101 ~~~~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~~~d~~~FP~Gl~~l~~~v~~~G~k~Glw~~pg~ 180 (455)
++.+.+|+.+++.|+.+.+.++ .++.|+||++|... . ..++++.|+++||+ .+.|++++|++|+|+.+|+.|..
T Consensus 276 ~~~~~~e~~v~~~~~~~r~~~i---P~d~i~lD~~w~~~-~-~~~~f~wd~~~FPd-p~~mi~~L~~~G~k~~~~i~P~i 349 (665)
T PRK10658 276 FTTNYDEATVNSFIDGMAERDL---PLHVFHFDCFWMKE-F-QWCDFEWDPRTFPD-PEGMLKRLKAKGLKICVWINPYI 349 (665)
T ss_pred cccCCCHHHHHHHHHHHHHcCC---CceEEEEchhhhcC-C-ceeeeEEChhhCCC-HHHHHHHHHHCCCEEEEeccCCc
Confidence 3345689999999999988554 47899999999863 1 23688999999998 99999999999999999999953
Q ss_pred cc-------------------------------c----CCCCcccccHHhHHHHHHhcCCcEEEeecCCCC--------C
Q 012852 181 FT-------------------------------C----QVRPGSLFHEKDDAPLFASWGVDYLKYDNCFNL--------G 217 (455)
Q Consensus 181 ~~-------------------------------c----~~~Pg~~~~~~~~~~~~~~wGidylK~D~~~~~--------~ 217 (455)
.. | .++|++.+++....+.|.+.|||.+|.|++... +
T Consensus 350 ~~~s~~f~e~~~~gy~vk~~~G~~~~~~~W~g~~~~~Dftnp~ar~W~~~~~~~l~d~Gvdgfw~D~gE~~p~d~~~~~G 429 (665)
T PRK10658 350 AQKSPLFKEGKEKGYLLKRPDGSVWQWDKWQPGMAIVDFTNPDACKWYADKLKGLLDMGVDCFKTDFGERIPTDVVWFDG 429 (665)
T ss_pred CCCchHHHHHHHCCeEEECCCCCEeeeeecCCCceeecCCCHHHHHHHHHHHHHHHhcCCcEEEecCCceeeccceecCC
Confidence 10 1 468889999988888889999999999987432 1
Q ss_pred CCc---cchhH-----HHHHHHHh-c--CCCeeEeeCCCCCCChhhhhhhccCeeeecCCCCCChhHHHHHHH
Q 012852 218 IEP---KKRYP-----PMRDALNE-T--GCSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDTWASMTSIAD 279 (455)
Q Consensus 218 ~~~---~~~y~-----~m~~AL~~-~--G~~i~~~~c~~g~~~p~~w~~~~~~~~Ris~Di~~~W~~~~~~~~ 279 (455)
.++ ...|. +..+++++ . .|+++++=|.+... ..|+-.| ++|+..+|+.+...+.
T Consensus 430 ~~~~~~hN~Y~~l~~ka~~e~l~~~~~~~r~~i~tRs~~aGs------Qry~~~W--sGD~~stw~~l~~si~ 494 (665)
T PRK10658 430 SDPQKMHNYYTYLYNKTVFDVLKETRGEGEAVLFARSATVGG------QQFPVHW--GGDCYSNYESMAESLR 494 (665)
T ss_pred CcHHHhcchhHHHHHHHHHHHHHHhcCCCceEEEEecccCCC------CCCCCEE--CCCCCCCHHHHHHHHH
Confidence 111 11222 34455654 3 36777765543221 2455567 7899999998876554
|
|
| >cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end | Back alignment and domain information |
|---|
Probab=99.07 E-value=5.4e-09 Score=106.59 Aligned_cols=159 Identities=15% Similarity=0.181 Sum_probs=117.7
Q ss_pred CCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCcccCCCCCCCCHHHHHHHHHhcCCeEEEEecCCccc--
Q 012852 105 ISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFT-- 182 (455)
Q Consensus 105 i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~~~d~~~FP~Gl~~l~~~v~~~G~k~Glw~~pg~~~-- 182 (455)
-|+++|++.++.+.+.+ .-++.|+||..|+. ..++++.|+++||+ .+.+++.||++|+|..+|+.|....
T Consensus 21 ~~~~ev~~v~~~~r~~~---IP~D~i~lDidy~~----~~~~Ft~d~~~FPd-p~~mv~~L~~~G~klv~~i~P~i~~g~ 92 (332)
T cd06601 21 SNRSDLEEVVEGYRDNN---IPLDGLHVDVDFQD----NYRTFTTNGGGFPN-PKEMFDNLHNKGLKCSTNITPVISYGG 92 (332)
T ss_pred CCHHHHHHHHHHHHHcC---CCCceEEEcCchhc----CCCceeecCCCCCC-HHHHHHHHHHCCCeEEEEecCceecCc
Confidence 58999999999998854 44799999999986 35789999999999 9999999999999999999996421
Q ss_pred ---------cCCCCcccccHHhHHHHHHhcCCcEEEeecCCCCCC---------C--------c-------------cch
Q 012852 183 ---------CQVRPGSLFHEKDDAPLFASWGVDYLKYDNCFNLGI---------E--------P-------------KKR 223 (455)
Q Consensus 183 ---------c~~~Pg~~~~~~~~~~~~~~wGidylK~D~~~~~~~---------~--------~-------------~~~ 223 (455)
-.++|.+.++.....+.|.+.|||+++.|++..... . . ...
T Consensus 93 ~~~~~~~~pDftnp~ar~wW~~~~~~l~~~Gv~~~W~DmnEp~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~hN~ 172 (332)
T cd06601 93 GLGSPGLYPDLGRPDVREWWGNQYKYLFDIGLEFVWQDMTTPAIMPSYGDMKGFPPRLLVTDDSYENNVKRKPAIELWNL 172 (332)
T ss_pred cCCCCceeeCCCCHHHHHHHHHHHHHHHhCCCceeecCCCCcccccCCCccCCCCCcccccCCccccccCCchHHHHhhh
Confidence 146788889888778888899999999999753200 0 0 011
Q ss_pred h-----HHHHHHHHhc-----CCCeeEeeCCCCCCChhhhhhhccCeeeecCCCCCChhHHHHHHH
Q 012852 224 Y-----PPMRDALNET-----GCSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDTWASMTSIAD 279 (455)
Q Consensus 224 y-----~~m~~AL~~~-----G~~i~~~~c~~g~~~p~~w~~~~~~~~Ris~Di~~~W~~~~~~~~ 279 (455)
| ++..+++++. .|+++++=+.+... ..|+..| ++|+..+|+.+...+.
T Consensus 173 Y~~~~~~a~~e~~~~~~~~~~~RpfiltRS~~aGs------qrY~~~W--sGDn~stW~~L~~si~ 230 (332)
T cd06601 173 YSYNLHKATWHGLNNLNARKNKRNFIIGRGSYAGM------QRFAGLW--TGDNSSSWDFLQINIA 230 (332)
T ss_pred hHHHHHHHHHHHHHHhhcCCCCCcEEEEecCcCcc------CCcCcee--CCCcccCHHHHHHHHH
Confidence 2 1233444332 47777765543221 2566678 8899999998765543
|
GLases cleave the bond between C1 and O1 of the nonreducing sugar residue of alpha-glucans to generate a monosaccharide product with a double bond between C1 and C2. This family corresponds to subgroup 2 in the Ernst et al classification of GH31 enzymes. |
| >cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus | Back alignment and domain information |
|---|
Probab=99.06 E-value=3.5e-09 Score=106.15 Aligned_cols=163 Identities=15% Similarity=0.082 Sum_probs=114.3
Q ss_pred CCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCC-----CCCCCCcccCCCCCCCCHHHHHHHHHhcCCeEEEEecC
Q 012852 104 NISETIIKETADALVSTGLAELGYDHVNIDDCWSSPL-----RDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDA 178 (455)
Q Consensus 104 ~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~-----rd~~G~~~~d~~~FP~Gl~~l~~~v~~~G~k~Glw~~p 178 (455)
..++++|++.|+.+.+.++ .++.|+||.+|+... .+..++++.|+++||+ .+.|+++||++|+|+-+|+.|
T Consensus 21 y~s~~ev~~v~~~~r~~~i---P~D~i~lD~dw~~~~~~~~~~~~~~~ft~d~~~FPd-p~~mi~~Lh~~G~k~v~~v~P 96 (292)
T cd06595 21 PYSDEEYLALMDRFKKHNI---PLDVLVIDMDWHVTDIPSKYGSGWTGYSWNRKLFPD-PEKLLQDLHDRGLKVTLNLHP 96 (292)
T ss_pred CCCHHHHHHHHHHHHHhCC---CccEEEEecccccccccccccCCcceeEEChhcCCC-HHHHHHHHHHCCCEEEEEeCC
Confidence 3589999999999988554 479999999998632 2345789999999998 999999999999999999999
Q ss_pred Cccc---------------c-----------CCCCcccccH-HhHHHHHHhcCCcEEEeecCCCCCC-----CccchhHH
Q 012852 179 GVFT---------------C-----------QVRPGSLFHE-KDDAPLFASWGVDYLKYDNCFNLGI-----EPKKRYPP 226 (455)
Q Consensus 179 g~~~---------------c-----------~~~Pg~~~~~-~~~~~~~~~wGidylK~D~~~~~~~-----~~~~~y~~ 226 (455)
.... + .++|++.++. +...+.+.+.|||.++.|++..... .+..-...
T Consensus 97 ~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~D~tnp~a~~~w~~~~~~~~~~~Gidg~W~D~~E~~~~~~~~~~~~~~~~~ 176 (292)
T cd06595 97 ADGIRAHEDQYPEMAKALGVDPATEGPILFDLTNPKFMDAYFDNVHRPLEKQGVDFWWLDWQQGNRTRTPGLDPLWWLNH 176 (292)
T ss_pred CcccCCCcHHHHHHHHhcCCCcccCCeEEecCCCHHHHHHHHHHHHHHHHhcCCcEEEecCCCCcccccCCcchHHHHHH
Confidence 6310 0 3567776644 5666778899999999999754321 11100000
Q ss_pred -HHHHHH-hcCCCeeEeeCCCCCCChhhhhhhccCeeeecCCCCCChhHHHHHH
Q 012852 227 -MRDALN-ETGCSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDTWASMTSIA 278 (455)
Q Consensus 227 -m~~AL~-~~G~~i~~~~c~~g~~~p~~w~~~~~~~~Ris~Di~~~W~~~~~~~ 278 (455)
..+... ..+|+++++=+.+.. ...|+-.| ++|+..+|+.+...+
T Consensus 177 ~~y~~~~~~~~r~f~lsRs~~~G------~qry~~~W--sGD~~s~W~~l~~~i 222 (292)
T cd06595 177 VHYLDSARNGRRPLIFSRWAGLG------SHRYPIGF--SGDTIISWASLAFQP 222 (292)
T ss_pred HHHHHhhccCCCcEEEEeecccC------CCcCCCcc--CCCcccCHHHHHHHH
Confidence 011111 246788876443321 12566678 899999999876443
|
Alpha-xylosidases catalyze the release of an alpha-xylose residue from the non-reducing end of alpha-xyloside substrates. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. |
| >cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate | Back alignment and domain information |
|---|
Probab=99.06 E-value=8.4e-09 Score=104.72 Aligned_cols=162 Identities=17% Similarity=0.182 Sum_probs=113.2
Q ss_pred CCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCcccCCCCCCCCHHHHHHHHHhcCCeEEEEecCCccc-
Q 012852 104 NISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFT- 182 (455)
Q Consensus 104 ~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~~~d~~~FP~Gl~~l~~~v~~~G~k~Glw~~pg~~~- 182 (455)
.-+++.+++.++.+.+.+ ..++.|+||.+|+...+ .|++..|+++||+ ++.+++++|++|+|+-+|+.|....
T Consensus 20 y~~~~ev~~~~~~~~~~~---iP~d~i~lD~~~~~~~~--~~~f~~d~~~FPd-p~~mi~~L~~~G~kv~~~i~P~v~~~ 93 (319)
T cd06591 20 YKTQEELLDVAKEYRKRG---IPLDVIVQDWFYWPKQG--WGEWKFDPERFPD-PKAMVRELHEMNAELMISIWPTFGPE 93 (319)
T ss_pred CCCHHHHHHHHHHHHHhC---CCccEEEEechhhcCCC--ceeEEEChhhCCC-HHHHHHHHHHCCCEEEEEecCCcCCC
Confidence 359999999999998854 45799999988876311 2589999999998 9999999999999999999885310
Q ss_pred -----------------------------c----CCCCcccccHH-hHHHHHHhcCCcEEEeecCCCCCCC---------
Q 012852 183 -----------------------------C----QVRPGSLFHEK-DDAPLFASWGVDYLKYDNCFNLGIE--------- 219 (455)
Q Consensus 183 -----------------------------c----~~~Pg~~~~~~-~~~~~~~~wGidylK~D~~~~~~~~--------- 219 (455)
+ .++|.+.+++. ...+.+.+.|||++|.|++......
T Consensus 94 ~~~y~e~~~~g~~v~~~~g~~~~~~w~g~~~~~Dftnp~a~~w~~~~~~~~~~~~Gvdg~w~D~~Ep~~~~~~~~~~~~~ 173 (319)
T cd06591 94 TENYKEMDEKGYLIKTDRGPRVTMQFGGNTRFYDATNPEAREYYWKQLKKNYYDKGVDAWWLDAAEPEYSVYDFGLDNYR 173 (319)
T ss_pred ChhHHHHHHCCEEEEcCCCCeeeeeCCCCccccCCCCHHHHHHHHHHHHHHhhcCCCcEEEecCCCCCccCCcccccCcc
Confidence 0 35777777764 4445678999999999999642110
Q ss_pred --------ccchhH-----HHHHHHHhc---CCCeeEeeCCCCCCChhhhhhhccC-eeeecCCCCCChhHHHHHHH
Q 012852 220 --------PKKRYP-----PMRDALNET---GCSIFYSLCEWGVDDPALWAGKVGN-SWRTTGDINDTWASMTSIAD 279 (455)
Q Consensus 220 --------~~~~y~-----~m~~AL~~~---G~~i~~~~c~~g~~~p~~w~~~~~~-~~Ris~Di~~~W~~~~~~~~ 279 (455)
....|. ...+++++. .|+++++=+.+.. ...|+. .| ++|...+|+.+...+.
T Consensus 174 ~~~~~~~~~hN~y~~~~~~~~~e~~~~~~~~~r~f~~sRs~~~G------sqry~~~~W--~GD~~s~w~~L~~~i~ 242 (319)
T cd06591 174 YHLGPGLEVGNAYPLMHAKGIYEGQRAAGDEKRVVILTRSAWAG------SQRYGALVW--SGDIDSSWETLRRQIA 242 (319)
T ss_pred cCCCCchhhhhhhHHHHHHHHHHHHHHhCCCCCceEEEeccccc------cccccCcee--CCCccccHHHHHHHHH
Confidence 011222 233455544 3677775433211 124553 56 6899999998766554
|
XylS has been characterized in Sulfolobus solfataricus where it hydrolyzes isoprimeverose, the p-nitrophenyl-beta derivative of isoprimeverose, and xyloglucan oligosaccharides, and has transxylosidic activity. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The XylS family corresponds to subgroup 3 in the Ernst et al classification of GH31 enzymes. |
| >cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II | Back alignment and domain information |
|---|
Probab=99.03 E-value=1e-08 Score=103.95 Aligned_cols=160 Identities=19% Similarity=0.224 Sum_probs=115.6
Q ss_pred CCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCcccCCCCCCCCHHHHHHHHHhcCCeEEEEecCCccc-
Q 012852 104 NISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFT- 182 (455)
Q Consensus 104 ~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~~~d~~~FP~Gl~~l~~~v~~~G~k~Glw~~pg~~~- 182 (455)
.-|++++++.++.+.+.+ .-++.|+||.+|+. ..+++..|+++||+ .+.+++.+|++|+|+-+|+.|....
T Consensus 20 y~~~~~v~~~~~~~~~~~---iP~d~i~lD~~~~~----~~~~f~~d~~~FPd-p~~~i~~l~~~g~k~~~~~~P~i~~~ 91 (317)
T cd06600 20 YYPQDKVVEVVDIMQKEG---FPYDVVFLDIHYMD----SYRLFTWDPYRFPE-PKKLIDELHKRNVKLVTIVDPGIRVD 91 (317)
T ss_pred CCCHHHHHHHHHHHHHcC---CCcceEEEChhhhC----CCCceeechhcCCC-HHHHHHHHHHCCCEEEEEeeccccCC
Confidence 358999999999998854 44799999999986 35678899999998 9999999999999999999885310
Q ss_pred ------------------------------------cCCCCcccccHHhHHHHHH-hcCCcEEEeecCCCCCC-Cccchh
Q 012852 183 ------------------------------------CQVRPGSLFHEKDDAPLFA-SWGVDYLKYDNCFNLGI-EPKKRY 224 (455)
Q Consensus 183 ------------------------------------c~~~Pg~~~~~~~~~~~~~-~wGidylK~D~~~~~~~-~~~~~y 224 (455)
..++|++.++....++.+. +.|||++|.|++..... +....|
T Consensus 92 ~~~~~~~~~~~~~~~v~~~~g~~~~~~~w~G~~~~~Dftnp~a~~ww~~~~~~~~~~~gvdg~w~D~~Ep~~~~~~hn~y 171 (317)
T cd06600 92 QNYSPFLSGMDKGKFCEIESGELFVGKMWPGTTVYPDFTNPDTREWWAGLFSEWLNSQGVDGIWLDMNEPSDFEKVHNLY 171 (317)
T ss_pred CCChHHHHHHHCCEEEECCCCCeEEEeecCCCccccCCCChHHHHHHHHHHHHHhhcCCCceEEeeCCCCccHHHhcchh
Confidence 0357777888866666654 99999999999875422 112233
Q ss_pred H-----HHHHHHHh---cCCCeeEeeCCCCCCChhhhhhhccCeeeecCCCCCChhHHHHHHH
Q 012852 225 P-----PMRDALNE---TGCSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDTWASMTSIAD 279 (455)
Q Consensus 225 ~-----~m~~AL~~---~G~~i~~~~c~~g~~~p~~w~~~~~~~~Ris~Di~~~W~~~~~~~~ 279 (455)
. ...+++++ ..|+++++=+.+... ..++-.| ++|+..+|+.+...+.
T Consensus 172 ~~~~~~a~~~~~~~~~~~~r~~~~sRs~~~G~------qry~~~W--~GD~~s~W~~L~~~i~ 226 (317)
T cd06600 172 GLYEAMATAEGFRTSHPRNRIFILTRSGFAGS------QKYAAIW--TGDNTASWDDLKLSIP 226 (317)
T ss_pred hHHHHHHHHHHHHHhcCCCCceEEEecccccc------CCccceE--CCcccccHHHHHHHHH
Confidence 2 23344443 347787875554321 2455556 7899999998765554
|
MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal do |
| >cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase | Back alignment and domain information |
|---|
Probab=99.02 E-value=3.1e-08 Score=101.42 Aligned_cols=159 Identities=18% Similarity=0.224 Sum_probs=112.7
Q ss_pred CCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCcccCCCCCCCCH--HHHHHHHHhcCCeEEEEecCCccc
Q 012852 105 ISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGI--KALADYVHGKGLKLGIYSDAGVFT 182 (455)
Q Consensus 105 i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~~~d~~~FP~Gl--~~l~~~v~~~G~k~Glw~~pg~~~ 182 (455)
-+++.|++.++.+.+.++ -++.|.||.+|+.. .+++..|+++||+ . +.+++.+|++|+|+-+|+.|....
T Consensus 21 ~~~~~v~~~~~~~r~~~i---P~d~i~lD~~~~~~----~~~f~~d~~~FPd-p~~~~mi~~L~~~G~k~~~~i~P~v~~ 92 (339)
T cd06602 21 KNVDEVKEVVENMRAAGI---PLDVQWNDIDYMDR----RRDFTLDPVRFPG-LKMPEFVDELHANGQHYVPILDPAISA 92 (339)
T ss_pred CCHHHHHHHHHHHHHhCC---CcceEEECcccccC----ccceecccccCCC-ccHHHHHHHHHHCCCEEEEEEeCcccc
Confidence 589999999999988554 47899999999863 5789999999998 7 999999999999999999885310
Q ss_pred -------------------------------c---------CCCCcccccHHhHHHH-HHhcCCcEEEeecCCCCCC-Cc
Q 012852 183 -------------------------------C---------QVRPGSLFHEKDDAPL-FASWGVDYLKYDNCFNLGI-EP 220 (455)
Q Consensus 183 -------------------------------c---------~~~Pg~~~~~~~~~~~-~~~wGidylK~D~~~~~~~-~~ 220 (455)
| .++|++.++.....+. +.+.|||++|.|++..... ..
T Consensus 93 ~~~~~~~~~~~e~~~~g~~v~~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~~Gvdg~w~D~~Ep~~~~~~ 172 (339)
T cd06602 93 NEPTGSYPPYDRGLEMDVFIKNDDGSPYIGKVWPGYTVFPDFLNPNTQEWWTDEIKDFHDQVPFDGLWIDMNEPSNFYDV 172 (339)
T ss_pred CcCCCCCHHHHHHHHCCeEEECCCCCEEEEEeCCCCCcCcCCCCHHHHHHHHHHHHHHHhcCCCcEEEecCCCCchHhhh
Confidence 0 2466677777666665 5679999999999864321 11
Q ss_pred cchhH-----HHHHHHHh-cC-CCeeEeeCCCCCCChhhhhhhccCeeeecCCCCCChhHHHHHHH
Q 012852 221 KKRYP-----PMRDALNE-TG-CSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDTWASMTSIAD 279 (455)
Q Consensus 221 ~~~y~-----~m~~AL~~-~G-~~i~~~~c~~g~~~p~~w~~~~~~~~Ris~Di~~~W~~~~~~~~ 279 (455)
...|. ...+++++ .+ |+++++=+.+... ..++-.| ++|+..+|+.+...+.
T Consensus 173 hN~y~~~~~~~~~~~~~~~~~~r~~~~sRs~~~G~------qry~~~w--~GD~~s~W~~L~~~i~ 230 (339)
T cd06602 173 HNLYGLSEAIATYKALQSIPGKRPFVISRSTFPGS------GRYAGHW--LGDNASTWEDLRYSII 230 (339)
T ss_pred cchhhHHHHHHHHHHHHhcCCCCCEEEEecCcccc------cccceeE--CCCccCCHHHHHHHHH
Confidence 12232 23345543 33 5666654433221 2455566 8899999998765553
|
MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal domain found near the membrane-bound end, and a C-terminal luminal domain. Both of |
| >PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.99 E-value=2.8e-09 Score=112.57 Aligned_cols=160 Identities=23% Similarity=0.311 Sum_probs=108.3
Q ss_pred CCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCcccCCCCCCCCHHHHHHHHHhcCCeEEEEecCCcccc-
Q 012852 105 ISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTC- 183 (455)
Q Consensus 105 i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~~~d~~~FP~Gl~~l~~~v~~~G~k~Glw~~pg~~~c- 183 (455)
-|++.+++.++.+.+.+ ..++.++||++|+. ..+++..|+++||+ ++.+++.+|++|+++++|+.|....+
T Consensus 40 ~~~~~v~~~i~~~~~~~---iP~d~~~iD~~~~~----~~~~f~~d~~~FPd-~~~~~~~l~~~G~~~~~~~~P~v~~~~ 111 (441)
T PF01055_consen 40 YNQDEVREVIDRYRSNG---IPLDVIWIDDDYQD----GYGDFTWDPERFPD-PKQMIDELHDQGIKVVLWVHPFVSNDS 111 (441)
T ss_dssp TSHHHHHHHHHHHHHTT-----EEEEEE-GGGSB----TTBTT-B-TTTTTT-HHHHHHHHHHTT-EEEEEEESEEETTT
T ss_pred CCHHHHHHHHHHHHHcC---CCccceeccccccc----cccccccccccccc-hHHHHHhHhhCCcEEEEEeecccCCCC
Confidence 56999999999998844 45899999999987 35689999999997 99999999999999999998842100
Q ss_pred -------------------------------------CCCCcccccHHhHHHHHHhc-CCcEEEeecCCCCC--------
Q 012852 184 -------------------------------------QVRPGSLFHEKDDAPLFASW-GVDYLKYDNCFNLG-------- 217 (455)
Q Consensus 184 -------------------------------------~~~Pg~~~~~~~~~~~~~~w-GidylK~D~~~~~~-------- 217 (455)
.++|.+.+++....+.+.+. |||++|.|++....
T Consensus 112 ~~~~~~~~~~~~~~~v~~~~g~~~~~~~w~g~~~~~Dftnp~a~~w~~~~~~~~~~~~Gvdg~w~D~~E~~~~~~~~~~~ 191 (441)
T PF01055_consen 112 PDYENYDEAKEKGYLVKNPDGSPYIGRVWPGKGGFIDFTNPEARDWWKEQLKELLDDYGVDGWWLDFGEPSSFDSNNTLP 191 (441)
T ss_dssp TB-HHHHHHHHTT-BEBCTTSSB-EEEETTEEEEEB-TTSHHHHHHHHHHHHHHHTTST-SEEEEESTTTBSSTTTBSBC
T ss_pred CcchhhhhHhhcCceeecccCCcccccccCCcccccCCCChhHHHHHHHHHHHHHhccCCceEEeecCCcccccccccCc
Confidence 35667778886666666655 99999999975542
Q ss_pred C-----C------ccchhH-----HHHHHHHh---cCCCeeEeeCCCCCCChhhhhhhccCeeeecCCCCCChhHHHHHH
Q 012852 218 I-----E------PKKRYP-----PMRDALNE---TGCSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDTWASMTSIA 278 (455)
Q Consensus 218 ~-----~------~~~~y~-----~m~~AL~~---~G~~i~~~~c~~g~~~p~~w~~~~~~~~Ris~Di~~~W~~~~~~~ 278 (455)
. . ....|. ...+++++ ..|+++++-+.|.. ...++..| ++|+..+|+.+...+
T Consensus 192 ~~~~~~~~~~~~~~hn~y~~~~~~~~~~~~~~~~~~~r~~~~sRs~~~G------~qr~~~~w--~GD~~s~w~~L~~~i 263 (441)
T PF01055_consen 192 EDAVHHDGYSGYEMHNLYGLLYAKATYEALREIDPNKRPFIFSRSGWAG------SQRYGGHW--SGDNSSSWDGLRSSI 263 (441)
T ss_dssp TTEECTTECEHHHHGGGHHHHHHHHHHHHHHHHSTTSC-EEEESSEETT------GGGTCEEE--ECSSBSSHHHHHHHH
T ss_pred ccceecCCCCchheeccccccchhhhhhhhhhccCCCCcceeecccCCC------CCccceee--cccccccHHHHHHHH
Confidence 0 0 022332 34455554 34677776443321 12455566 789999999887665
Q ss_pred Hh
Q 012852 279 DI 280 (455)
Q Consensus 279 ~~ 280 (455)
..
T Consensus 264 ~~ 265 (441)
T PF01055_consen 264 PA 265 (441)
T ss_dssp HH
T ss_pred HH
Confidence 43
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 31 GH31 from CAZY comprises enzymes with several known activities; alpha-glucosidase (3.2.1.20 from EC), alpha-galactosidase (3.2.1.22 from EC); glucoamylase (3.2.1.3 from EC), sucrase-isomaltase (3.2.1.48 from EC); isomaltase (3.2.1.10 from EC); alpha-xylosidase (3.2.1 from EC); alpha-glucan lyase (4.2.2.13 from EC). Glycoside hydrolase family 31 groups a number of glycosyl hydrolases on the basis of sequence similarities [, , ] An aspartic acid has been implicated [] in the catalytic activity of sucrase, isomaltase, and lysosomal alpha-glucosidase.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3L4U_A 3L4X_A 3L4W_A 3L4V_A 3CTT_A 2QMJ_A 2QLY_A 3L4Z_A 3L4Y_A 3L4T_A .... |
| >cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ | Back alignment and domain information |
|---|
Probab=98.96 E-value=3.3e-08 Score=101.28 Aligned_cols=170 Identities=18% Similarity=0.204 Sum_probs=111.3
Q ss_pred chhhhCcCCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCC------------CC-----CCCcccC-CCCCCCCH
Q 012852 97 SWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLR------------DL-----KGQLVPD-TITFPSGI 158 (455)
Q Consensus 97 SW~~~~~~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~r------------d~-----~G~~~~d-~~~FP~Gl 158 (455)
-|..-+...++++|++.|+.+.+.++ -++.|+||+ |+...- |. .++...+ .++||+ .
T Consensus 13 ~~~sr~~Y~~~~ev~~v~~~~~~~~i---P~d~i~lD~-W~~~~~~~~w~d~~y~~~~~~~~~~~~~~~f~~~~~FPd-p 87 (340)
T cd06597 13 LWMSANEWDTQAEVMRQMDAHEEHGI---PVTVVVIEQ-WSDEATFYVFNDAQYTPKDGGAPLSYDDFSFPVEGRWPN-P 87 (340)
T ss_pred hhhhccCCCCHHHHHHHHHHHHHcCC---CeeEEEEec-ccCcceeeeeccchhcccccCCcceecccccCccccCCC-H
Confidence 34444456899999999999988554 379999995 886211 11 1333444 368998 9
Q ss_pred HHHHHHHHhcCCeEEEEecCCccc---------------------------------------c----CCCCcccccHHh
Q 012852 159 KALADYVHGKGLKLGIYSDAGVFT---------------------------------------C----QVRPGSLFHEKD 195 (455)
Q Consensus 159 ~~l~~~v~~~G~k~Glw~~pg~~~---------------------------------------c----~~~Pg~~~~~~~ 195 (455)
+.|+++||++|+|+-+|+.|.... | .++|++.++...
T Consensus 88 ~~mi~~Lh~~G~kv~l~v~P~i~~~~~~~~~~~~~~~~~~~~g~~vk~~~G~~~~~~~~W~g~~~~~Dftnp~a~~Ww~~ 167 (340)
T cd06597 88 KGMIDELHEQGVKVLLWQIPIIKLRPHPHGQADNDEDYAVAQNYLVQRGVGKPYRIPGQWFPDSLMLDFTNPEAAQWWME 167 (340)
T ss_pred HHHHHHHHHCCCEEEEEecCccccccccccccchhHHHHHHCCEEEEcCCCCccccccccCCCceeecCCCHHHHHHHHH
Confidence 999999999999999999884210 1 245667777766
Q ss_pred HHHHHH-hcCCcEEEeecCCCCC---------CCc---cchh-----HHHHHHHHhcC-CCeeEeeCCCCCCChhhhhhh
Q 012852 196 DAPLFA-SWGVDYLKYDNCFNLG---------IEP---KKRY-----PPMRDALNETG-CSIFYSLCEWGVDDPALWAGK 256 (455)
Q Consensus 196 ~~~~~~-~wGidylK~D~~~~~~---------~~~---~~~y-----~~m~~AL~~~G-~~i~~~~c~~g~~~p~~w~~~ 256 (455)
..+.+- +.|||.+|.|++...- ... ...| +.+.+++++.+ |+++++=+.+... ..
T Consensus 168 ~~~~~~~~~Gidg~w~D~~E~~~~~~~~~~~g~~~~~~hN~y~~~~~~~~~e~~~~~~~r~filtRs~~~Gs------qr 241 (340)
T cd06597 168 KRRYLVDELGIDGFKTDGGEHVWGRDLHFRDGRRGDEMRNTYPNHYVRAYNDFLRRAKKDGVTFSRAGYTGA------QA 241 (340)
T ss_pred HHHHHHHhcCCcEEEecCCCccCCCCceecCCCcHHHhhcccHHHHHHHHHHHHHhccCCcEEEEecccCcc------CC
Confidence 666554 7999999999885320 000 1122 23444555555 6676664443211 24
Q ss_pred ccCeeeecCCCCCChhHHHHHHH
Q 012852 257 VGNSWRTTGDINDTWASMTSIAD 279 (455)
Q Consensus 257 ~~~~~Ris~Di~~~W~~~~~~~~ 279 (455)
++-.| ++|+..+|+.+...+.
T Consensus 242 y~~~W--sGD~~s~W~~L~~~i~ 262 (340)
T cd06597 242 HGIFW--AGDENSTFGAFRWSVF 262 (340)
T ss_pred Cccee--cCCCCCCHHHHHHHHH
Confidence 55456 7899999998765554
|
CtsY and CtsZ both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. |
| >cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride | Back alignment and domain information |
|---|
Probab=98.94 E-value=1e-07 Score=96.80 Aligned_cols=160 Identities=18% Similarity=0.304 Sum_probs=108.5
Q ss_pred CHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCC-----CcccCCCCCCCCHHHHHHHHHhcCCeEEEEecCCc
Q 012852 106 SETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKG-----QLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGV 180 (455)
Q Consensus 106 ~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G-----~~~~d~~~FP~Gl~~l~~~v~~~G~k~Glw~~pg~ 180 (455)
++++|++.++.+.+.++ -++.|.|| .|+...-+..| ++..|+++||+ .+.|++++|++|+|+-+|+.|..
T Consensus 21 s~~~v~~~~~~~~~~~i---P~d~i~ld-dw~~~~~~~~g~~~~~~f~~d~~~FPd-p~~mi~~Lh~~G~~~~~~i~P~v 95 (317)
T cd06594 21 GTDKVLEALEKARAAGV---KVAGLWLQ-DWTGRRETSFGDRLWWNWEWDPERYPG-LDELIEELKARGIRVLTYINPYL 95 (317)
T ss_pred CHHHHHHHHHHHHHcCC---CeeEEEEc-cccCcccccccceeeeeeEEChhhCCC-HHHHHHHHHHCCCEEEEEecCce
Confidence 99999999999988554 37999999 58642112223 47899999998 99999999999999999999963
Q ss_pred cc--------------------------------c----CCCCcccccHHhHHHH-HHhcCCcEEEeecCCCCCC-----
Q 012852 181 FT--------------------------------C----QVRPGSLFHEKDDAPL-FASWGVDYLKYDNCFNLGI----- 218 (455)
Q Consensus 181 ~~--------------------------------c----~~~Pg~~~~~~~~~~~-~~~wGidylK~D~~~~~~~----- 218 (455)
.. | .++|++.++....++. +.+.|||.+|.|++.....
T Consensus 96 ~~~~~~~y~~~~~~g~~vk~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~~Gvdg~w~D~~E~~p~d~~~~ 175 (317)
T cd06594 96 ADDGPLYYEEAKDAGYLVKDADGSPYLVDFGEFDCGVLDLTNPAARDWFKQVIKEMLLDLGLSGWMADFGEYLPFDAVLH 175 (317)
T ss_pred ecCCchhHHHHHHCCeEEECCCCCeeeeccCCCCceeeecCCHHHHHHHHHHHHHHhhhcCCcEEEecCCCCCCCcceec
Confidence 10 0 3567888888655554 4899999999999864211
Q ss_pred Cc------cchhH-----HHHHHHHhc---CCCeeEeeCCCCCCChhhhhhhccC-eeeecCCCCCChh---HHHHHH
Q 012852 219 EP------KKRYP-----PMRDALNET---GCSIFYSLCEWGVDDPALWAGKVGN-SWRTTGDINDTWA---SMTSIA 278 (455)
Q Consensus 219 ~~------~~~y~-----~m~~AL~~~---G~~i~~~~c~~g~~~p~~w~~~~~~-~~Ris~Di~~~W~---~~~~~~ 278 (455)
.+ ...|. ...+++++. +|+++++=+.+.. ...|+. .| ++|+..+|+ .+...+
T Consensus 176 ~g~~~~~~hN~y~~~~~~~~~~~~~~~~~~~r~fvltRs~~~G------sqry~~~~W--sGD~~s~W~~~~~L~~~i 245 (317)
T cd06594 176 SGEDAATMHNRYPELWAKLNREAVEEAGKTGDILFFMRSGFTG------SQKYSTLFW--AGDQMVSWDAHDGLKSVV 245 (317)
T ss_pred CCCCHHHHhhHHHHHHHHHHHHHHHHhccCCCeEEEEcccccc------ccccccccc--CCCCCCCCcCcccHHHHH
Confidence 11 12232 123344443 4667776443321 125554 46 789999997 355444
|
Orthologs of YihQ that have not yet been functionally characterized are present in plants and fungi. YihQ has sequence similarity to other GH31 enzymes such as CtsZ, a 6-alpha-glucosyltransferase from Bacillus globisporus, and YicI, an alpha-xylosidase from Echerichia coli. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation. |
| >cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB) | Back alignment and domain information |
|---|
Probab=98.92 E-value=7.7e-08 Score=98.50 Aligned_cols=161 Identities=17% Similarity=0.122 Sum_probs=114.1
Q ss_pred cCCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCcccCCCCCCCCHHHHHHHHHhcCCeEEEEecCCccc
Q 012852 103 CNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFT 182 (455)
Q Consensus 103 ~~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~~~d~~~FP~Gl~~l~~~v~~~G~k~Glw~~pg~~~ 182 (455)
..-|++++++.|+.+.+.++ .++.|.||..|.. ..+++..|+++||+ .+.+++.+|++|+|+-+|+.|....
T Consensus 19 ~y~~~~ev~~~~~~~~~~~i---P~d~i~lD~~~~~----~~~~f~~d~~~FPd-p~~mi~~L~~~G~k~~~~~~P~v~~ 90 (339)
T cd06603 19 NYKDQEDVKEVDAGFDEHDI---PYDVIWLDIEHTD----GKRYFTWDKKKFPD-PEKMQEKLASKGRKLVTIVDPHIKR 90 (339)
T ss_pred CCCCHHHHHHHHHHHHHcCC---CceEEEEChHHhC----CCCceEeCcccCCC-HHHHHHHHHHCCCEEEEEecCceec
Confidence 34689999999999988554 4799999999976 35678999999998 9999999999999999999885210
Q ss_pred ---------------------------------c----CCCCcccccHHhHHHHHH---hcCCcEEEeecCCCCCC----
Q 012852 183 ---------------------------------C----QVRPGSLFHEKDDAPLFA---SWGVDYLKYDNCFNLGI---- 218 (455)
Q Consensus 183 ---------------------------------c----~~~Pg~~~~~~~~~~~~~---~wGidylK~D~~~~~~~---- 218 (455)
| .++|++.+++...++.+. +.|+++++.|++.....
T Consensus 91 ~~~~~~y~e~~~~g~~vk~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~~~~g~~g~w~D~~Ep~~f~~~~ 170 (339)
T cd06603 91 DDGYYVYKEAKDKGYLVKNSDGGDFEGWCWPGSSSWPDFLNPEVRDWWASLFSYDKYKGSTENLYIWNDMNEPSVFNGPE 170 (339)
T ss_pred CCCCHHHHHHHHCCeEEECCCCCEEEEEECCCCcCCccCCChhHHHHHHHHHHHHhhcccCCCceEEeccCCccccCCCC
Confidence 1 357888888876666554 47999999999853210
Q ss_pred -------------Cc---cchhH-----HHHHHHHhc----CCCeeEeeCCCCCCChhhhhhhccCeeeecCCCCCChhH
Q 012852 219 -------------EP---KKRYP-----PMRDALNET----GCSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDTWAS 273 (455)
Q Consensus 219 -------------~~---~~~y~-----~m~~AL~~~----G~~i~~~~c~~g~~~p~~w~~~~~~~~Ris~Di~~~W~~ 273 (455)
.. ...|. ...+++++. .|+++++-+.+... ..++-.| ++|+..+|+.
T Consensus 171 ~~~p~d~~~~~~~~~~~~hN~y~~~~~~a~~e~~~~~~~~~~r~~~~sRs~~~G~------qry~~~W--~GD~~s~W~~ 242 (339)
T cd06603 171 LTMPKDAIHYGGIEHREVHNIYGLYMHMATFDGLLKRSEGNKRPFVLTRSFFAGS------QRYAAIW--TGDNTATWEH 242 (339)
T ss_pred CcCCCcceecCCCcHHHHhhHhHHHHHHHHHHHHHHhhccCCceEEEEecccccc------cceeeee--CCCccCCHHH
Confidence 00 11232 233455432 46776765443221 2455566 7899999998
Q ss_pred HHHHHH
Q 012852 274 MTSIAD 279 (455)
Q Consensus 274 ~~~~~~ 279 (455)
+...+.
T Consensus 243 L~~~i~ 248 (339)
T cd06603 243 LKISIP 248 (339)
T ss_pred HHHHHH
Confidence 776554
|
Initially distinguished on the basis of differences in electrophoretic mobility in starch gel, GANC and GANAB have been shown to have other differences, including those of substrate specificity. GANC and GANAB are key enzymes in glycogen metabolism that hydrolyze terminal, non-reducing 1,4-linked alpha-D-glucose residues from glycogen in the endoplasmic reticulum. The GANC/GANAB family includes the alpha-glucosidase II (ModA) from Dictyostelium discoideum as well as the alpha-glucosidase II (GLS2, or ROT2 - Reversal of TOR2 lethality protein 2) from Saccharomyces cerevisiae. |
| >COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.7e-08 Score=112.82 Aligned_cols=170 Identities=20% Similarity=0.252 Sum_probs=126.1
Q ss_pred eEEechhhhCcCCCHHHHHHHHHHHHHcCCcccCceEEEecCC-cCCCCCCCCCCcccCCCCCCCCHHHHHHHHHhcCCe
Q 012852 93 MGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDC-WSSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLK 171 (455)
Q Consensus 93 ~gwnSW~~~~~~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDG-W~~~~rd~~G~~~~d~~~FP~Gl~~l~~~v~~~G~k 171 (455)
+| +.|-..+..-+|+.+.+.++.+.+ .+.-++.|+||.. |.. ..+.++.|+.+||+ .+.|++++|++|+|
T Consensus 266 ~G-~~~~~~~~~~~e~~v~~~i~~~~~---~~IP~d~~~lD~~~~~~----~~~~F~wd~~~FP~-pk~mi~~l~~~Gik 336 (772)
T COG1501 266 LG-WLWTSRYTYYDEDEVLEFIDEMRE---RDIPLDVFVLDIDFWMD----NWGDFTWDPDRFPD-PKQMIAELHEKGIK 336 (772)
T ss_pred cC-CCceeccccccHHHHHHHHhhccc---ccCcceEEEEeehhhhc----cccceEECcccCCC-HHHHHHHHHhcCce
Confidence 45 244444456789999999999976 5566899999986 754 45789999999999 99999999999999
Q ss_pred EEEEecCCcc--------------------------cc---------CCCCcccccHH-hHHHHHHhcCCcEEEeecCCC
Q 012852 172 LGIYSDAGVF--------------------------TC---------QVRPGSLFHEK-DDAPLFASWGVDYLKYDNCFN 215 (455)
Q Consensus 172 ~Glw~~pg~~--------------------------~c---------~~~Pg~~~~~~-~~~~~~~~wGidylK~D~~~~ 215 (455)
+-+|+.|... .| .++|+++++.. ...+.+.+.|||.++.|+|-.
T Consensus 337 l~~~i~P~i~~d~~~~~e~~~~Gy~~k~~~g~~~~~~~w~~~~a~~DFtnp~~r~Ww~~~~~~~l~d~Gv~g~W~D~nEp 416 (772)
T COG1501 337 LIVIINPYIKQDSPLFKEAIEKGYFVKDPDGEIYQADFWPGNSAFPDFTNPDAREWWASDKKKNLLDLGVDGFWNDMNEP 416 (772)
T ss_pred EEEEeccccccCCchHHHHHHCCeEEECCCCCEeeecccCCcccccCCCCHHHHHHHHHHHHhHHHhcCccEEEccCCCC
Confidence 9999999531 01 46889999998 556779999999999999865
Q ss_pred CCCC------c------cchh-----HHHHHHHHhc---CCCeeEeeCCCCCCChhhhhhhccCeeeecCCCCCChhHHH
Q 012852 216 LGIE------P------KKRY-----PPMRDALNET---GCSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDTWASMT 275 (455)
Q Consensus 216 ~~~~------~------~~~y-----~~m~~AL~~~---G~~i~~~~c~~g~~~p~~w~~~~~~~~Ris~Di~~~W~~~~ 275 (455)
.-.+ + ...| +...+++++. .|+++|+=|.+... ..++-.| ++|+...|+++.
T Consensus 417 ~~~~~~~~~~g~~~~~~~N~yp~~~~~a~~~~~~~~~~~~r~~~lsRsg~aG~------Q~~~~~W--sGD~~s~wd~l~ 488 (772)
T COG1501 417 EPFDGDGFGNGIDHEEMHNLYPLLYAKAVYEALKELGGNERPFILSRSGYAGS------QRYAAHW--SGDNRSSWDSLR 488 (772)
T ss_pred ccccccccccccCHHHHhcchhHHHHHHHHHHHHhhcCCCceEEEEecccccc------eecccee--CCccccchHHHH
Confidence 4211 1 1222 2455667665 47888876654321 1557788 899999999987
Q ss_pred HHHH
Q 012852 276 SIAD 279 (455)
Q Consensus 276 ~~~~ 279 (455)
..+.
T Consensus 489 ~si~ 492 (772)
T COG1501 489 ESIP 492 (772)
T ss_pred hhHH
Confidence 6654
|
|
| >PLN02763 hydrolase, hydrolyzing O-glycosyl compounds | Back alignment and domain information |
|---|
Probab=98.70 E-value=7e-07 Score=101.37 Aligned_cols=159 Identities=19% Similarity=0.177 Sum_probs=114.2
Q ss_pred CCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCcccCCCCCCCCHHHHHHHHHhcCCeEEEEecCCccc--
Q 012852 105 ISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFT-- 182 (455)
Q Consensus 105 i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~~~d~~~FP~Gl~~l~~~v~~~G~k~Glw~~pg~~~-- 182 (455)
-+++.+++.|+.+.+.+ .-++.|.||..|... .+.++.|+++||+ .+.|++.+|++|+|.-.+++|+...
T Consensus 198 ~sq~eV~eva~~fre~~---IP~DvIwlDidYm~g----~~~FTwD~~rFPd-P~~mv~~Lh~~G~kvv~iidPgI~~d~ 269 (978)
T PLN02763 198 ESAKRVAEIARTFREKK---IPCDVVWMDIDYMDG----FRCFTFDKERFPD-PKGLADDLHSIGFKAIWMLDPGIKAEE 269 (978)
T ss_pred CCHHHHHHHHHHHHHcC---CCceEEEEehhhhcC----CCceeECcccCCC-HHHHHHHHHHCCCEEEEEEcCCCccCC
Confidence 58999999999998854 447999999999763 4468999999998 9999999999999997777885310
Q ss_pred -------------------------------c----CCCCcccccHHhHHHHHHhcCCcEEEeecCCCCCC---------
Q 012852 183 -------------------------------C----QVRPGSLFHEKDDAPLFASWGVDYLKYDNCFNLGI--------- 218 (455)
Q Consensus 183 -------------------------------c----~~~Pg~~~~~~~~~~~~~~wGidylK~D~~~~~~~--------- 218 (455)
| .++|.+++|.....+.|.+.|||.++.|+|.....
T Consensus 270 gY~~y~eg~~~~~fvk~~~G~~y~G~vWpG~~~fpDFTnP~ar~WW~~~~k~l~d~GVDG~W~DmnEPa~f~~~~~t~P~ 349 (978)
T PLN02763 270 GYFVYDSGCENDVWIQTADGKPFVGEVWPGPCVFPDFTNKKTRSWWANLVKDFVSNGVDGIWNDMNEPAVFKTVTKTMPE 349 (978)
T ss_pred CCHHHHhHhhcCeeEECCCCCeeEeeecCCCccccCCCCHHHHHHHHHHHHHHhcCCCcEEEccCCCCccccCCcCCCCc
Confidence 1 24677888888888888899999999999854210
Q ss_pred ------C-------c----cchhH-----HHHHHHHh---cCCCeeEeeCCCCCCChhhhhhhccCeeeecCCCCCChhH
Q 012852 219 ------E-------P----KKRYP-----PMRDALNE---TGCSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDTWAS 273 (455)
Q Consensus 219 ------~-------~----~~~y~-----~m~~AL~~---~G~~i~~~~c~~g~~~p~~w~~~~~~~~Ris~Di~~~W~~ 273 (455)
+ . ...|. +..+++++ ..|+++++=+.+... ..|+-.| ++|...+|+.
T Consensus 350 ~~~h~g~~~~gG~~~h~~~HNlYgll~akatyEgl~~~~~~kRPFilTRSgfaGs------QRYaa~W--tGDn~SsWe~ 421 (978)
T PLN02763 350 TNIHRGDEELGGVQNHSHYHNVYGMLMARSTYEGMLLANKNKRPFVLTRAGFIGS------QRYAATW--TGDNLSNWEH 421 (978)
T ss_pred cccccCCcccCCccCHHHHhhhhHHHHHHHHHHHHHHhCCCCCcEEEEccccCcC------CCCceEE--CCCccCCHHH
Confidence 0 0 11121 22334433 247888865543221 2566677 8899999998
Q ss_pred HHHHHH
Q 012852 274 MTSIAD 279 (455)
Q Consensus 274 ~~~~~~ 279 (455)
+...+.
T Consensus 422 L~~sI~ 427 (978)
T PLN02763 422 LHMSIP 427 (978)
T ss_pred HHHHHH
Confidence 765543
|
|
| >PRK10426 alpha-glucosidase; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.1e-06 Score=96.91 Aligned_cols=154 Identities=18% Similarity=0.258 Sum_probs=107.6
Q ss_pred CHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCC-----CCcccCCCCCCCCHHHHHHHHHhcCCeEEEEecCCc
Q 012852 106 SETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLK-----GQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGV 180 (455)
Q Consensus 106 ~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~-----G~~~~d~~~FP~Gl~~l~~~v~~~G~k~Glw~~pg~ 180 (455)
+++++++.++.+.+.++ -++.|.||| |+..+.... ++|+.|+++||+ .+.+++++|++|+|+-+|+.|..
T Consensus 219 ~~~~v~~v~~~~r~~~I---P~d~i~ldd-w~~~~~~~~g~~~~~~~~~d~~~FPd-p~~mi~~L~~~G~k~v~~i~P~v 293 (635)
T PRK10426 219 GTEVVQKKLDTMRNAGV---KVNGIWAQD-WSGIRMTSFGKRLMWNWKWDSERYPQ-LDSRIKQLNEEGIQFLGYINPYL 293 (635)
T ss_pred CHHHHHHHHHHHHHcCC---CeeEEEEec-ccccccccccccccccceEChhhCCC-HHHHHHHHHHCCCEEEEEEcCcc
Confidence 57889999999987544 378899984 986322222 467889999998 99999999999999999999952
Q ss_pred c-------------------------------cc----CCCCcccccHHhHH-HHHHhcCCcEEEeecCCCCC-------
Q 012852 181 F-------------------------------TC----QVRPGSLFHEKDDA-PLFASWGVDYLKYDNCFNLG------- 217 (455)
Q Consensus 181 ~-------------------------------~c----~~~Pg~~~~~~~~~-~~~~~wGidylK~D~~~~~~------- 217 (455)
. .| .++|++.+++...+ +.+.+.|||.+|.|++....
T Consensus 294 ~~~~~~y~e~~~~gy~vk~~~g~~~~~~~~~~~~~~~Dftnp~ar~Ww~~~~~~~~~~~Gvdg~w~D~~E~~p~d~~~~~ 373 (635)
T PRK10426 294 ASDGDLCEEAAEKGYLAKDADGGDYLVEFGEFYAGVVDLTNPEAYEWFKEVIKKNMIGLGCSGWMADFGEYLPTDAYLHN 373 (635)
T ss_pred CCCCHHHHHHHHCCcEEECCCCCEEEeEecCCCceeecCCCHHHHHHHHHHHHHHHhhcCCCEEeeeCCCCCCCcceeeC
Confidence 1 01 46788888886655 56889999999999976321
Q ss_pred -CCc---cchhH-----HHHHHHHhc---CCCeeEeeCCCCCCChhhhhhhccC-eeeecCCCCCChh
Q 012852 218 -IEP---KKRYP-----PMRDALNET---GCSIFYSLCEWGVDDPALWAGKVGN-SWRTTGDINDTWA 272 (455)
Q Consensus 218 -~~~---~~~y~-----~m~~AL~~~---G~~i~~~~c~~g~~~p~~w~~~~~~-~~Ris~Di~~~W~ 272 (455)
.+. ...|. ...+++++. +|+++++=+.+.. ...|+. .| ++|...+|+
T Consensus 374 g~~~~~~hN~Y~~l~~~~~~e~~~~~~~~~r~f~ltRsg~aG------sQry~~~~W--sGD~~ssW~ 433 (635)
T PRK10426 374 GVSAEIMHNAWPALWAKCNYEALEETGKLGEILFFMRAGYTG------SQKYSTLFW--AGDQNVDWS 433 (635)
T ss_pred CCCHHHhccHHHHHHHHHHHHHHHHhcCCCCcEEEEccccCC------cCCcccccc--CCCCCCcCc
Confidence 111 12332 234555544 4677775443211 125554 57 789999995
|
|
| >KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.84 E-value=6.4e-05 Score=83.21 Aligned_cols=114 Identities=18% Similarity=0.172 Sum_probs=91.7
Q ss_pred EEechhhhC--cCCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCcccCCCCCCCCHHHHHHHHHhcCCe
Q 012852 94 GWNSWNFFA--CNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLK 171 (455)
Q Consensus 94 gwnSW~~~~--~~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~~~d~~~FP~Gl~~l~~~v~~~G~k 171 (455)
-|+-|..+. ...+.+.+++.++.+.+ +..+++.+++|+-|+. .++|.++|+.+||. |+.+++.||+.|||
T Consensus 295 YWslGf~~~RwgY~nls~~~dvv~~~~~---agiPld~~~~DiDyMd----~ykDFTvd~~~fp~-~~~fv~~Lh~~G~k 366 (805)
T KOG1065|consen 295 YWSLGFQLCRWGYKNLSVVRDVVENYRA---AGIPLDVIVIDIDYMD----GYKDFTVDKVWFPD-LKDFVDDLHARGFK 366 (805)
T ss_pred hhhccceecccccccHHHHHHHHHHHHH---cCCCcceeeeehhhhh----cccceeeccccCcc-hHHHHHHHHhCCCe
Confidence 388887665 57899999999999976 4456789999999986 46789999999998 99999999999999
Q ss_pred EEEEecCCccc------------c--------------------------CCCCcccccHHhHHHHHH-hcCCcEEEeec
Q 012852 172 LGIYSDAGVFT------------C--------------------------QVRPGSLFHEKDDAPLFA-SWGVDYLKYDN 212 (455)
Q Consensus 172 ~Glw~~pg~~~------------c--------------------------~~~Pg~~~~~~~~~~~~~-~wGidylK~D~ 212 (455)
.=++++|+..+ | -++|.+..+....++.|. +.+||.+++|+
T Consensus 367 yvliidP~is~~~~y~~y~~g~~~~v~I~~~~g~~~~lg~vwP~~~~fpDftnp~~~~Ww~~~~~~fh~~vp~dg~wiDm 446 (805)
T KOG1065|consen 367 YVLIIDPFISTNSSYGPYDRGVAKDVLIKNREGSPKMLGEVWPGSTAFPDFTNPAVVEWWLDELKRFHDEVPFDGFWIDM 446 (805)
T ss_pred EEEEeCCccccCccchhhhhhhhhceeeecccCchhhhcccCCCcccccccCCchHHHHHHHHHHhhcccCCccceEEEC
Confidence 99999996421 0 134555666666666775 88999999999
Q ss_pred CCC
Q 012852 213 CFN 215 (455)
Q Consensus 213 ~~~ 215 (455)
+..
T Consensus 447 nE~ 449 (805)
T KOG1065|consen 447 NEP 449 (805)
T ss_pred CCc
Confidence 754
|
|
| >TIGR02456 treS_nterm trehalose synthase | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.3 Score=53.35 Aligned_cols=69 Identities=6% Similarity=0.091 Sum_probs=48.6
Q ss_pred eeEEEEEcCCCcEEEEEEecCCCceeEEEEceecCCCCCCceEEEEccCCccccccccceEEEEEcCCCEEEEEE
Q 012852 371 LQVWVGPLSGHRLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQVDAHDCQMYIF 445 (455)
Q Consensus 371 ~~vw~~~l~dg~~avalfN~~~~~~~iti~l~~LGL~~~~~~~vrDlW~g~~~~g~~~~~l~~~L~pH~~~ll~l 445 (455)
.-++.+... ++.+++++|.+++++++++++... .+ -...|+.+++.......+.++++|+|+++.+|+|
T Consensus 470 v~~f~R~~~-~~~vlVv~N~s~~~~~v~l~~~~~--~~---~~~~dl~~~~~~~~~~~~~~~~~l~p~~~~~~~~ 538 (539)
T TIGR02456 470 VLAFLREYE-GERVLCVFNFSRNPQAVELDLSEF--AG---RVPVELIGGAPFPPVGGDGYLLTLGPHGFYWFRL 538 (539)
T ss_pred EEEEEEEcC-CcEEEEEEeCCCCCEEeecccccc--cc---CcceecccCCccccccCCcceEEECCceEEEEEe
Confidence 455566654 467899999999998888876543 12 1258888887541122234889999999999985
|
Trehalose synthase interconverts maltose and alpha, alpha-trehalose by transglucosylation. This is one of at least three mechanisms for biosynthesis of trehalose, an important and widespread compatible solute. However, it is not driven by phosphate activation of sugars and its physiological role may tend toward trehalose degradation. This view is accentuated by numerous examples of fusion to a probable maltokinase domain. The sequence region described by this model is found both as the whole of a trehalose synthase and as the N-terminal region of a larger fusion protein that includes trehalose synthase activity. Several of these fused trehalose synthases have a domain homologous to proteins with maltokinase activity from Actinoplanes missouriensis and Streptomyces coelicolor (PubMed:15378530). |
| >cd06596 GH31_CPE1046 CPE1046 is an uncharacterized Clostridium perfringens protein with a glycosyl hydrolase family 31 (GH31) domain | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.011 Score=58.26 Aligned_cols=177 Identities=19% Similarity=0.297 Sum_probs=108.4
Q ss_pred CCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCcccCCCCCCCCHHHHHHHHHhcCCeEEEEecCCccccC
Q 012852 105 ISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQ 184 (455)
Q Consensus 105 i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~~~d~~~FP~Gl~~l~~~v~~~G~k~Glw~~pg~~~c~ 184 (455)
-.+..+++.||..++.. +...+|+-+||+... . +.|+.++++++++|++.|||++-+
T Consensus 42 ~~~~~a~~~~~~y~~~~---~plgw~lpndgyg~~------y---------~~l~~~~~~~~~~g~~~glwt~~~----- 98 (261)
T cd06596 42 STTDDARKVADKYKEND---MPLGWMLPNDGYGCG------Y---------ENLKEVVDYLHANGVETGLWTQSG----- 98 (261)
T ss_pred cchhhHHHHHHHHHhcC---CCceeeccCCCCcch------H---------HHHHHHHHHHHHcCCccccccccc-----
Confidence 34566788888887744 345677778777542 1 239999999999999999997643
Q ss_pred CCCcccccHHhHHHHHHhcCCcEEEeecCCCCCC-C-ccchhHHHHHHHHh--cCCCeeEeeCCCCCCChhhhhhhccCe
Q 012852 185 VRPGSLFHEKDDAPLFASWGVDYLKYDNCFNLGI-E-PKKRYPPMRDALNE--TGCSIFYSLCEWGVDDPALWAGKVGNS 260 (455)
Q Consensus 185 ~~Pg~~~~~~~~~~~~~~wGidylK~D~~~~~~~-~-~~~~y~~m~~AL~~--~G~~i~~~~c~~g~~~p~~w~~~~~~~ 260 (455)
+++..+.....|+.++|+|--..+.- . +...-+...+++++ ..|+++++-|.|... ..++-.
T Consensus 99 --------l~~~~~ev~~~g~~~~k~Dv~w~g~gy~~~l~~~ka~yeg~~~~~~~RpfiltRsg~aGs------QRy~~~ 164 (261)
T cd06596 99 --------LRDIAKEVGAAGVRARKTDVAWVGAGYSFALNGVKAAADGIESNSNARPFIVTVDGWAGT------QRYAGI 164 (261)
T ss_pred --------hhhhhhhhccCCceEEeccchhhccchhHHHHHHHHHHHHHHhCCCCCCEEEEecCcccc------CCCCCc
Confidence 24455667788999999998754321 1 11111223334433 348899987766432 245556
Q ss_pred eeecCCCCCChhHHHHHHHhhcccccccCCCCc-CCCCccccCCCCCCHHHHHHHHHHHHHHhCceee
Q 012852 261 WRTTGDINDTWASMTSIADINDKWASYAGPGGW-NDPDMLEVGNGGMSYQEYRAHFSIWALMKAPLLI 327 (455)
Q Consensus 261 ~Ris~Di~~~W~~~~~~~~~~~~~~~~~g~g~~-nDpDmL~vg~~~lT~~E~rt~~slwa~~gsPL~i 327 (455)
| ++|+..+|+.+...+...... .++|-..| .|.+=+. | + + .|--++-.-|+++ .|++.
T Consensus 165 W--sGD~~stWe~Lr~sI~~~L~~-gLsG~p~~G~DIGGF~-g--~-~-~EL~vRW~Q~gaF-~P~~R 223 (261)
T cd06596 165 W--TGDQSGSWEYIRFHIPTYIGS-GLSGQPNTTSDVDGIF-G--G-S-PETYTRDLQWKAF-TPVLM 223 (261)
T ss_pred c--CCCCcCcHHHHHHHHHHHHHH-HhcCCCcCccccCcCC-C--C-C-HHHHHHHHHHHHh-hhhhh
Confidence 7 889999999876555432221 23443333 4443321 2 2 3 4555554555555 57664
|
The domain architecture of CPE1046 and its orthologs includes a C-terminal fibronectin type 3 (FN3) domain and a coagulation factor 5/8 type C domain in addition to the GH31 domain. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. |
| >PRK10785 maltodextrin glucosidase; Provisional | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.92 Score=50.27 Aligned_cols=136 Identities=13% Similarity=0.107 Sum_probs=83.6
Q ss_pred cCCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCc-----ccCCCCCCC--CHHHHHHHHHhcCCeEEEE
Q 012852 103 CNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQL-----VPDTITFPS--GIKALADYVHGKGLKLGIY 175 (455)
Q Consensus 103 ~~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~-----~~d~~~FP~--Gl~~l~~~v~~~G~k~Glw 175 (455)
+.=|-+.|.+..+.+ +++|++.|-|=-=.... ...|.+ .+|| .|.. .|+.|++.+|++|||+=|=
T Consensus 174 ~GGDl~GI~~kLdYL-----~~LGv~~I~L~Pif~s~--s~hgYd~~Dy~~iDp-~~Gt~~df~~Lv~~aH~rGikVilD 245 (598)
T PRK10785 174 YGGDLDGISEKLPYL-----KKLGVTALYLNPIFTAP--SVHKYDTEDYRHVDP-QLGGDAALLRLRHATQQRGMRLVLD 245 (598)
T ss_pred cCcCHHHHHHHHHHH-----HHcCCCEEEeCCcccCC--CCCCcCcccccccCc-ccCCHHHHHHHHHHHHHCCCEEEEE
Confidence 345789999999999 77999988876544331 112332 3554 4432 5999999999999996542
Q ss_pred ecC-------------------------------------Ccccc-----------CCCCcccccHHh----HHHHHH-h
Q 012852 176 SDA-------------------------------------GVFTC-----------QVRPGSLFHEKD----DAPLFA-S 202 (455)
Q Consensus 176 ~~p-------------------------------------g~~~c-----------~~~Pg~~~~~~~----~~~~~~-~ 202 (455)
+-+ +...| ..+|.+++|+.. .++.+- +
T Consensus 246 ~V~NH~~~~~~~f~~~~~~~~ga~~~~~spy~dwf~~~~~~~~~~w~g~~~lPdLN~~np~v~~~l~~~~~~v~~~Wl~~ 325 (598)
T PRK10785 246 GVFNHTGDSHPWFDRHNRGTGGACHHPDSPWRDWYSFSDDGRALDWLGYASLPKLDFQSEEVVNEIYRGEDSIVRHWLKA 325 (598)
T ss_pred ECCCcCCCCCHHHHHhhccccccccCCCCCcceeeEECCCCCcCCcCCCCcCccccCCCHHHHHHHHhhhhHHHHHhhcC
Confidence 211 00001 135666777643 455443 3
Q ss_pred -cCCcEEEeecCCCCCC-----CccchhHHHHHHHHhcCCCeeEeeCCCC
Q 012852 203 -WGVDYLKYDNCFNLGI-----EPKKRYPPMRDALNETGCSIFYSLCEWG 246 (455)
Q Consensus 203 -wGidylK~D~~~~~~~-----~~~~~y~~m~~AL~~~G~~i~~~~c~~g 246 (455)
.|||.+.+|....-.. ...+..+.+++++++..++.++..-.|.
T Consensus 326 ~~giDG~RlDva~~v~~~~~~~~~~~f~~~~~~~vk~~~pd~~ligE~~~ 375 (598)
T PRK10785 326 PYNIDGWRLDVVHMLGEGGGARNNLQHVAGITQAAKEENPEAYVLGEHFG 375 (598)
T ss_pred CCCCcEEEEecHhHhccccCccccHHHHHHHHHHHHhhCCCeEEEEeccC
Confidence 6999999998643211 1224456788888888877665433343
|
|
| >PRK14706 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.86 Score=50.86 Aligned_cols=114 Identities=20% Similarity=0.327 Sum_probs=67.7
Q ss_pred cccCceEEEec--------CCcCCCCCCCCCCcccCCCCC--CCCHHHHHHHHHhcCCeEEEEecCC-------------
Q 012852 123 AELGYDHVNID--------DCWSSPLRDLKGQLVPDTITF--PSGIKALADYVHGKGLKLGIYSDAG------------- 179 (455)
Q Consensus 123 ~~~G~~~~~iD--------DGW~~~~rd~~G~~~~d~~~F--P~Gl~~l~~~v~~~G~k~Glw~~pg------------- 179 (455)
+++||+.|.|= ..|- .+..+...++ .+| |+.|+.||+.+|++||++=|=+-+.
T Consensus 178 k~lG~t~velmPv~e~~~~~~wG---Y~~~~~~~~~-~~~g~~~~~~~lv~~~H~~gi~VilD~v~nH~~~~~~~l~~~d 253 (639)
T PRK14706 178 TYMGYTHVELLGVMEHPFDGSWG---YQVTGYYAPT-SRLGTPEDFKYLVNHLHGLGIGVILDWVPGHFPTDESGLAHFD 253 (639)
T ss_pred HHcCCCEEEccchhcCCCCCCCC---cCcccccccc-cccCCHHHHHHHHHHHHHCCCEEEEEecccccCcchhhhhccC
Confidence 78898887652 2231 1112233444 344 3579999999999999976432220
Q ss_pred -------------cc----cc---CCCCcccccHHhHHHHH-HhcCCcEEEeecCCCC----------------C---CC
Q 012852 180 -------------VF----TC---QVRPGSLFHEKDDAPLF-ASWGVDYLKYDNCFNL----------------G---IE 219 (455)
Q Consensus 180 -------------~~----~c---~~~Pg~~~~~~~~~~~~-~~wGidylK~D~~~~~----------------~---~~ 219 (455)
.. ++ .++|+++.|+-..+..+ .+.+||.+.+|....- + .+
T Consensus 254 g~~~y~~~~~~~g~~~~w~~~~~~~~~~eVr~~l~~~~~~W~~e~~iDG~R~Dav~~~ly~d~~~~~~~~~~~gg~~n~~ 333 (639)
T PRK14706 254 GGPLYEYADPRKGYHYDWNTYIFDYGRNEVVMFLIGSALKWLQDFHVDGLRVDAVASMLYLDFSRTEWVPNIHGGRENLE 333 (639)
T ss_pred CCcceeccCCcCCcCCCCCCcccCCCCHHHHHHHHHHHHHHHHHhCCCeEEEeeehheeecccCcccccccccCCcccHH
Confidence 00 00 23677788877666665 6899999999974321 0 01
Q ss_pred ccchhHHHHHHHHhcCCCeeE
Q 012852 220 PKKRYPPMRDALNETGCSIFY 240 (455)
Q Consensus 220 ~~~~y~~m~~AL~~~G~~i~~ 240 (455)
.....+.+.+++++..+++++
T Consensus 334 a~~fl~~ln~~v~~~~p~~~~ 354 (639)
T PRK14706 334 AIAFLKRLNEVTHHMAPGCMM 354 (639)
T ss_pred HHHHHHHHHHHHHHhCCCeEE
Confidence 223345667777776666543
|
|
| >PRK09441 cytoplasmic alpha-amylase; Reviewed | Back alignment and domain information |
|---|
Probab=95.95 E-value=2.3 Score=45.72 Aligned_cols=52 Identities=15% Similarity=0.100 Sum_probs=33.5
Q ss_pred CCcccccHHhHHHHHHh-cCCcEEEeecCCCCCCCccchhHHHHHHHHhcC-CCeeE
Q 012852 186 RPGSLFHEKDDAPLFAS-WGVDYLKYDNCFNLGIEPKKRYPPMRDALNETG-CSIFY 240 (455)
Q Consensus 186 ~Pg~~~~~~~~~~~~~~-wGidylK~D~~~~~~~~~~~~y~~m~~AL~~~G-~~i~~ 240 (455)
+|.+++++...++.+.+ .|||.+.+|....-. ......+.+++++.. .++++
T Consensus 207 np~V~~~l~~~~~~w~~~~giDGfRlDavk~v~---~~f~~~~~~~~~~~~~~~~~~ 260 (479)
T PRK09441 207 HPEVREELKYWAKWYMETTGFDGFRLDAVKHID---AWFIKEWIEHVREVAGKDLFI 260 (479)
T ss_pred CHHHHHHHHHHHHHHHHhcCCCEEEEhhhcCCC---HHHHHHHHHHHHHhcCCCeEE
Confidence 35556666666666665 999999999876542 234456777776543 34443
|
|
| >PRK12313 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=95.26 E-value=6.4 Score=43.91 Aligned_cols=102 Identities=19% Similarity=0.238 Sum_probs=61.5
Q ss_pred CHHHHHHH-HHHHHHcCCcccCceEEEecCCcCCC-----CCCCCCCcccCCCCCC--CCHHHHHHHHHhcCCeEEEEec
Q 012852 106 SETIIKET-ADALVSTGLAELGYDHVNIDDCWSSP-----LRDLKGQLVPDTITFP--SGIKALADYVHGKGLKLGIYSD 177 (455)
Q Consensus 106 ~e~~i~~~-ad~~~~~gl~~~G~~~~~iDDGW~~~-----~rd~~G~~~~d~~~FP--~Gl~~l~~~v~~~G~k~Glw~~ 177 (455)
|-..+.+. ++.+ +++|++.|.|=-=+... +.+..+...+++ +|- +.||.||+.+|++||++=|=+-
T Consensus 168 ~~~~~~~~ll~yl-----~~LGv~~i~L~Pi~~~~~~~~~GY~~~~y~~i~~-~~Gt~~d~k~lv~~~H~~Gi~VilD~V 241 (633)
T PRK12313 168 SYRELADELIPYV-----KEMGYTHVEFMPLMEHPLDGSWGYQLTGYFAPTS-RYGTPEDFMYLVDALHQNGIGVILDWV 241 (633)
T ss_pred CHHHHHHHHHHHH-----HHcCCCEEEeCchhcCCCCCCCCCCCcCcCcCCC-CCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 44444444 4777 77999888764322211 111122334443 343 4699999999999999755322
Q ss_pred CC--------------c------------c---cc----CCCCcccccHHhHHHHH-HhcCCcEEEeecC
Q 012852 178 AG--------------V------------F---TC----QVRPGSLFHEKDDAPLF-ASWGVDYLKYDNC 213 (455)
Q Consensus 178 pg--------------~------------~---~c----~~~Pg~~~~~~~~~~~~-~~wGidylK~D~~ 213 (455)
+. . . .+ ..+|++++|+...++.+ .++|||.+.+|..
T Consensus 242 ~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~n~~~~~vr~~l~~~~~~W~~~~~iDG~R~D~~ 311 (633)
T PRK12313 242 PGHFPKDDDGLAYFDGTPLYEYQDPRRAENPDWGALNFDLGKNEVRSFLISSALFWLDEYHLDGLRVDAV 311 (633)
T ss_pred CCCCCCCcccccccCCCcceeecCCCCCcCCCCCCcccCCCCHHHHHHHHHHHHHHHHHhCCcEEEEcCh
Confidence 20 0 0 00 23567777877666665 5789999999954
|
|
| >PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function | Back alignment and domain information |
|---|
Probab=94.42 E-value=0.3 Score=49.67 Aligned_cols=103 Identities=19% Similarity=0.237 Sum_probs=67.4
Q ss_pred CHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCC--CCC--------CCCcccCCCCCCCCHHHHHHHHHhcCCeEEEE
Q 012852 106 SETIIKETADALVSTGLAELGYDHVNIDDCWSSPL--RDL--------KGQLVPDTITFPSGIKALADYVHGKGLKLGIY 175 (455)
Q Consensus 106 ~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~--rd~--------~G~~~~d~~~FP~Gl~~l~~~v~~~G~k~Glw 175 (455)
+++.+.+.++.+ +++|++.|.++=-+.+.. ..+ .|....+|. | +=|+.+++..|++||++=-|
T Consensus 17 ~~~~~~~~l~~l-----~~~~~N~V~~qVr~~gda~Y~S~~~p~s~~~~g~~~~~pg-~-DpL~~~I~eaHkrGlevHAW 89 (311)
T PF02638_consen 17 SKEQIDEMLDDL-----KSAGFNAVFVQVRPRGDALYPSDIEPWSGYLTGKQGKDPG-F-DPLEFMIEEAHKRGLEVHAW 89 (311)
T ss_pred CHHHHHHHHHHH-----HHcCCCEEEEEEEeCcEEEecccccccccccCCCCCCCCC-c-cHHHHHHHHHHHcCCEEEEE
Confidence 788899999988 556677777764332210 000 011111110 1 12899999999999999999
Q ss_pred ecCCc-----------------------------------cccCCCCcccccHHhHHH-HHHhcCCcEEEeecCCC
Q 012852 176 SDAGV-----------------------------------FTCQVRPGSLFHEKDDAP-LFASWGVDYLKYDNCFN 215 (455)
Q Consensus 176 ~~pg~-----------------------------------~~c~~~Pg~~~~~~~~~~-~~~~wGidylK~D~~~~ 215 (455)
++.++ .-|+++|++++|+...++ .++.+.||.|-+|....
T Consensus 90 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lnP~~PeVr~~i~~~v~Eiv~~YdvDGIhlDdy~y 165 (311)
T PF02638_consen 90 FRVGFNAPDVSHILKKHPEWFAVNHPGWVRTYEDANGGYYWLNPGHPEVRDYIIDIVKEIVKNYDVDGIHLDDYFY 165 (311)
T ss_pred EEeecCCCchhhhhhcCchhheecCCCceeecccCCCCceEECCCCHHHHHHHHHHHHHHHhcCCCCeEEeccccc
Confidence 85321 013678999999977665 45799999999996543
|
|
| >PRK12568 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=94.32 E-value=12 Score=42.52 Aligned_cols=94 Identities=18% Similarity=0.217 Sum_probs=56.6
Q ss_pred HHHHHHcCCcccCceEEEecCCcCCC-----CCCCCCCcccCCCCCC--CCHHHHHHHHHhcCCeEEEEecCC-------
Q 012852 114 ADALVSTGLAELGYDHVNIDDCWSSP-----LRDLKGQLVPDTITFP--SGIKALADYVHGKGLKLGIYSDAG------- 179 (455)
Q Consensus 114 ad~~~~~gl~~~G~~~~~iDDGW~~~-----~rd~~G~~~~d~~~FP--~Gl~~l~~~v~~~G~k~Glw~~pg------- 179 (455)
++.+ +++||+.|.|=--.... +-+..|...+++ +|. +.++.||+.+|++||++=|=+-+.
T Consensus 276 l~yl-----k~LGvt~I~LmPi~e~~~~~~wGY~~~~~~a~~~-~~G~~~dfk~lV~~~H~~Gi~VIlD~V~nH~~~d~~ 349 (730)
T PRK12568 276 IPYV-----QQLGFTHIELLPITEHPFGGSWGYQPLGLYAPTA-RHGSPDGFAQFVDACHRAGIGVILDWVSAHFPDDAH 349 (730)
T ss_pred HHHH-----HHcCCCEEEECccccCCCCCCCCCCCCcCCccCc-ccCCHHHHHHHHHHHHHCCCEEEEEeccccCCcccc
Confidence 5666 77899888653211110 111223344553 454 369999999999999976533221
Q ss_pred -------c--c--------------cc---CCCCcccccHHhHHHH-HHhcCCcEEEeecC
Q 012852 180 -------V--F--------------TC---QVRPGSLFHEKDDAPL-FASWGVDYLKYDNC 213 (455)
Q Consensus 180 -------~--~--------------~c---~~~Pg~~~~~~~~~~~-~~~wGidylK~D~~ 213 (455)
. + ++ .++|+++.|+-..+.. +.++|||.+.+|..
T Consensus 350 ~l~~fdg~~~Ye~~d~~~g~~~~W~~~~~N~~~peVr~~li~~a~~Wl~eyhIDG~R~DAv 410 (730)
T PRK12568 350 GLAQFDGAALYEHADPREGMHRDWNTLIYNYGRPEVTAYLLGSALEWIEHYHLDGLRVDAV 410 (730)
T ss_pred ccccCCCccccccCCCcCCccCCCCCeecccCCHHHHHHHHHHHHHHHHHhCceEEEEcCH
Confidence 0 0 00 2356666777555555 46899999999964
|
|
| >PF02806 Alpha-amylase_C: Alpha amylase, C-terminal all-beta domain; InterPro: IPR006048 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=94.03 E-value=0.44 Score=39.13 Aligned_cols=71 Identities=10% Similarity=0.158 Sum_probs=46.1
Q ss_pred eeEEEEEcCCCcEEEEEEecCCCceeEEEEceecCCCCCCceEEEEccCCccc--ccc-----------ccceEEEEEcC
Q 012852 371 LQVWVGPLSGHRLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQV--TGD-----------AVSSFGAQVDA 437 (455)
Q Consensus 371 ~~vw~~~l~dg~~avalfN~~~~~~~iti~l~~LGL~~~~~~~vrDlW~g~~~--~g~-----------~~~~l~~~L~p 437 (455)
.=+|.|..+++..+|+++|.+++....++ .+|++.. -+.+++.+..+. .|. ..+.++++|||
T Consensus 11 v~af~R~~~~~~~~lvv~Nf~~~~~~~~~---~~~~p~~--g~y~~vlnsd~~~~~g~~~~~~~~v~~~~~g~~~~~lp~ 85 (95)
T PF02806_consen 11 VIAFERKDKGDDRVLVVFNFSPEAVYEDY---RIGVPEA--GRYKEVLNSDDEEYGGSGKGNSGEVTVDSNGRITVTLPP 85 (95)
T ss_dssp EEEEEETTTETTEEEEEEESSSS-EEEEE---EECSSSS--EEEEETTTTTCEEEEESSCSETSEEEEETTSEEEEEEST
T ss_pred EEEEEEcCCCCCEEEEEEECCCcccceeE---EeCCCCc--ceeeEEeCCCccEECCcccccCceEEEeeCCEEEEEECC
Confidence 45566654333378999999997444443 4566632 355777776332 111 25678999999
Q ss_pred CCEEEEEEE
Q 012852 438 HDCQMYIFT 446 (455)
Q Consensus 438 H~~~ll~lt 446 (455)
.++.+|++.
T Consensus 86 ~s~~vl~~~ 94 (95)
T PF02806_consen 86 YSALVLKLK 94 (95)
T ss_dssp TEEEEEEEE
T ss_pred CEEEEEEEc
Confidence 999999985
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Alpha-amylase is classified as family 13 of the glycosyl hydrolases and is present in archaea, bacteria, plants and animals. Alpha-amylase is an essential enzyme in alpha-glucan metabolism, acting to catalyse the hydrolysis of alpha-1,4-glucosidic bonds of glycogen, starch and related polysaccharides. Although all alpha-amylases possess the same catalytic function, they can vary with respect to sequence. In general, they are composed of three domains: a TIM barrel containing the active site residues and chloride ion-binding site (domain A), a long loop region inserted between the third beta strand and the alpha-helix of domain A that contains calcium-binding site(s) (domain B), and a C-terminal beta-sheet domain that appears to show some variability in sequence and length between amylases (domain C) []. Amylases have at least one conserved calcium-binding site, as calcium is essential for the stability of the enzyme. The chloride-binding functions to activate the enzyme, which acts by a two-step mechanism involving a catalytic nucleophile base (usually an Asp) and a catalytic proton donor (usually a Glu) that are responsible for the formation of the beta-linked glycosyl-enzyme intermediate. This entry represents the all-beta domain that is found in several alpha-amylases, usually at the C terminus, and which forms a Greek key beta-barrel fold in these enzymes []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 1TCM_A 1CXL_A 1PJ9_A 1OT2_A 2DIJ_A 1CGV_A 1CXK_A 1PEZ_A 1CGX_A 2CXG_A .... |
| >TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase | Back alignment and domain information |
|---|
Probab=93.65 E-value=0.71 Score=51.26 Aligned_cols=128 Identities=16% Similarity=0.254 Sum_probs=80.5
Q ss_pred CCHHHHHHHH-HHHHHcCCcccCceEEEec--------CCcCCCCCCCCCCcccCCCCCC--CCHHHHHHHHHhcCCeEE
Q 012852 105 ISETIIKETA-DALVSTGLAELGYDHVNID--------DCWSSPLRDLKGQLVPDTITFP--SGIKALADYVHGKGLKLG 173 (455)
Q Consensus 105 i~e~~i~~~a-d~~~~~gl~~~G~~~~~iD--------DGW~~~~rd~~G~~~~d~~~FP--~Gl~~l~~~v~~~G~k~G 173 (455)
-|...|.+.. +.+ +++|++.|.|= ..|- -+..+...+++ +|. +.||.||+.+|++||++=
T Consensus 153 g~~~~i~~~l~dyl-----~~LGvt~i~L~Pi~e~~~~~~wG---Y~~~~y~~~~~-~~Gt~~dlk~lV~~~H~~Gi~Vi 223 (613)
T TIGR01515 153 LSYRELADQLIPYV-----KELGFTHIELLPVAEHPFDGSWG---YQVTGYYAPTS-RFGTPDDFMYFVDACHQAGIGVI 223 (613)
T ss_pred CCHHHHHHHHHHHH-----HHcCCCEEEECCcccCCCCCCCC---CCcccCccccc-ccCCHHHHHHHHHHHHHCCCEEE
Confidence 4566666654 777 78999999882 2231 12223445553 554 359999999999999998
Q ss_pred EEecCCc----------------c--cc---------------CCCCcccccHHhHHHHH-HhcCCcEEEeecCCCC---
Q 012852 174 IYSDAGV----------------F--TC---------------QVRPGSLFHEKDDAPLF-ASWGVDYLKYDNCFNL--- 216 (455)
Q Consensus 174 lw~~pg~----------------~--~c---------------~~~Pg~~~~~~~~~~~~-~~wGidylK~D~~~~~--- 216 (455)
|-+-+.- + .+ ..+|++++|+...++.+ .++|||.+.+|....-
T Consensus 224 lD~V~NH~~~~~~~~~~~~~~~~y~~~~~~~~~~~~w~~~~~~~~~~~Vr~~l~~~~~~W~~ey~iDG~R~D~v~~~~~~ 303 (613)
T TIGR01515 224 LDWVPGHFPKDDHGLAEFDGTPLYEHKDPRDGEHWDWGTLIFDYGRPEVRNFLVANALYWAEFYHIDGLRVDAVASMLYL 303 (613)
T ss_pred EEecccCcCCccchhhccCCCcceeccCCccCcCCCCCCceecCCCHHHHHHHHHHHHHHHHHhCCcEEEEcCHHHhhhh
Confidence 8765410 0 00 13567777877666665 5899999999974210
Q ss_pred ------------------CCCccchhHHHHHHHHhcCCCeeEe
Q 012852 217 ------------------GIEPKKRYPPMRDALNETGCSIFYS 241 (455)
Q Consensus 217 ------------------~~~~~~~y~~m~~AL~~~G~~i~~~ 241 (455)
..++.+-.+.+++.+++..+++++.
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~v~~~~p~~~li 346 (613)
T TIGR01515 304 DYSRDEGEWSPNEDGGRENLEAVDFLRKLNQTVYEAFPGVVTI 346 (613)
T ss_pred ccccccccccccccCCcCChHHHHHHHHHHHHHHHHCCCeEEE
Confidence 0012334467777777777765543
|
A sequence from Arabidopsis thaliana, GP|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here. |
| >PRK14705 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=93.34 E-value=17 Score=43.68 Aligned_cols=92 Identities=20% Similarity=0.269 Sum_probs=56.4
Q ss_pred HHHHHHHcCCcccCceEEEe--------cCCcCCCCCCCCCCcccCCCCC--CCCHHHHHHHHHhcCCeEEEEecCCc--
Q 012852 113 TADALVSTGLAELGYDHVNI--------DDCWSSPLRDLKGQLVPDTITF--PSGIKALADYVHGKGLKLGIYSDAGV-- 180 (455)
Q Consensus 113 ~ad~~~~~gl~~~G~~~~~i--------DDGW~~~~rd~~G~~~~d~~~F--P~Gl~~l~~~v~~~G~k~Glw~~pg~-- 180 (455)
.++.+ +++||+.|.| |..|- .+..+...|+ .+| |+.||.||+.+|++||++=|=+-|.-
T Consensus 771 lldYl-----k~LGvt~IeLmPv~e~p~~~swG---Y~~~~y~ap~-~ryGt~~dfk~lVd~~H~~GI~VILD~V~nH~~ 841 (1224)
T PRK14705 771 LVDYV-----KWLGFTHVEFMPVAEHPFGGSWG---YQVTSYFAPT-SRFGHPDEFRFLVDSLHQAGIGVLLDWVPAHFP 841 (1224)
T ss_pred HHHHH-----HHhCCCEEEECccccCCCCCCCC---CCccccCCcC-cccCCHHHHHHHHHHHHHCCCEEEEEeccccCC
Confidence 35777 7789988864 22231 1122333344 234 35799999999999999765433310
Q ss_pred ----------c-------cc--------------CCCCcccccHHhHHHH-HHhcCCcEEEeecC
Q 012852 181 ----------F-------TC--------------QVRPGSLFHEKDDAPL-FASWGVDYLKYDNC 213 (455)
Q Consensus 181 ----------~-------~c--------------~~~Pg~~~~~~~~~~~-~~~wGidylK~D~~ 213 (455)
. .+ .++|+++.|+-..+.. +.+++||.+.+|..
T Consensus 842 ~d~~~l~~fdg~~~y~~~d~~~g~~~~Wg~~~fn~~~~eVr~fli~~a~~Wl~eyhiDGfR~Dav 906 (1224)
T PRK14705 842 KDSWALAQFDGQPLYEHADPALGEHPDWGTLIFDFGRTEVRNFLVANALYWLDEFHIDGLRVDAV 906 (1224)
T ss_pred cchhhhhhcCCCcccccCCcccCCCCCCCCceecCCCHHHHHHHHHHHHHHHHHhCCCcEEEeeh
Confidence 0 00 1345566666555554 46899999999985
|
|
| >PF13200 DUF4015: Putative glycosyl hydrolase domain | Back alignment and domain information |
|---|
Probab=92.69 E-value=0.61 Score=47.54 Aligned_cols=101 Identities=18% Similarity=0.117 Sum_probs=72.7
Q ss_pred CHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCcccC-----------CCCCCCCHHHHHHHHHhcCCeEEE
Q 012852 106 SETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPD-----------TITFPSGIKALADYVHGKGLKLGI 174 (455)
Q Consensus 106 ~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~~~d-----------~~~FP~Gl~~l~~~v~~~G~k~Gl 174 (455)
+++.+.+.++.+ ++-|++.+||| -.|++|.+..+ ...+...++.|++.+|++|+-+=-
T Consensus 11 ~~~~~~~~~~~i-----~~t~lNavVID------vKdd~G~i~y~s~~~~~~~~ga~~~~i~D~~~l~~~l~e~gIY~IA 79 (316)
T PF13200_consen 11 SPERLDKLLDLI-----KRTELNAVVID------VKDDDGNITYDSQVPLAREIGAVKPYIKDLKALVKKLKEHGIYPIA 79 (316)
T ss_pred CHHHHHHHHHHH-----HhcCCceEEEE------EecCCceEEecCCCchhhhcccccccccCHHHHHHHHHHCCCEEEE
Confidence 457788888888 45667889987 23444544321 122223599999999999988766
Q ss_pred EecCCc----------------------------cccCCCCcccccHHhHHHHHHhcCCcEEEeecCCCCC
Q 012852 175 YSDAGV----------------------------FTCQVRPGSLFHEKDDAPLFASWGVDYLKYDNCFNLG 217 (455)
Q Consensus 175 w~~pg~----------------------------~~c~~~Pg~~~~~~~~~~~~~~wGidylK~D~~~~~~ 217 (455)
++..+. ..|+..+++.+|.-..++..++.|||-|-+|+...+.
T Consensus 80 RIv~FkD~~la~~~pe~av~~~~G~~w~d~~~~~WvnP~~~evw~Y~i~IA~Eaa~~GFdEIqfDYIRFP~ 150 (316)
T PF13200_consen 80 RIVVFKDPVLAEAHPEWAVKTKDGSVWRDNEGEAWVNPYSKEVWDYNIDIAKEAAKLGFDEIQFDYIRFPD 150 (316)
T ss_pred EEEEecChHHhhhChhhEEECCCCCcccCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCCEEEeeeeecCC
Confidence 664221 2346677888999899999999999999999987764
|
|
| >PF08533 Glyco_hydro_42C: Beta-galactosidase C-terminal domain; InterPro: IPR013739 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=92.65 E-value=0.15 Score=38.50 Aligned_cols=55 Identities=18% Similarity=0.113 Sum_probs=29.0
Q ss_pred eEEEEEcCCCcEEEEEEecCCCceeEEEEceecCCCCCCceEEEEccCCccccccccceEEEEEcCCCEEEEE
Q 012852 372 QVWVGPLSGHRLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQVDAHDCQMYI 444 (455)
Q Consensus 372 ~vw~~~l~dg~~avalfN~~~~~~~iti~l~~LGL~~~~~~~vrDlW~g~~~~g~~~~~l~~~L~pH~~~ll~ 444 (455)
+|=.+. .++..++-++|.++++++++++- ..+|+.+++.. .+. ++|+|+++++++
T Consensus 3 ev~~R~-~~~~~y~F~~N~s~~~~~v~l~~-----------~~~dll~g~~~----~~~--~~L~p~~v~Vl~ 57 (58)
T PF08533_consen 3 EVTVRE-NDGGRYLFLLNFSDEPQTVTLPE-----------SYTDLLTGETV----SGG--LTLPPYGVRVLK 57 (58)
T ss_dssp EEEE-----ETTEEEEEE-SSS-EE----T-----------T-EEEES-------------SEE-TTEEEEEE
T ss_pred EEEEEE-cCCCEEEEEEECCCCCEEEEcCC-----------CceecccCcce----eeE--EEECCCEEEEEE
Confidence 343442 34456899999999999887621 34899999865 222 889999999986
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This domain is found at the C terminus of beta-galactosidase enzymes that belong to the glycosyl hydrolase 42 family []. ; GO: 0004565 beta-galactosidase activity; PDB: 1KWK_A 1KWG_A. |
| >PRK05402 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=91.17 E-value=32 Score=39.18 Aligned_cols=101 Identities=17% Similarity=0.182 Sum_probs=59.6
Q ss_pred HHHHHHH-HHHHHHcCCcccCceEEEecCCcCCC-----CCCCCCCcccCCCCCC--CCHHHHHHHHHhcCCeEEEEecC
Q 012852 107 ETIIKET-ADALVSTGLAELGYDHVNIDDCWSSP-----LRDLKGQLVPDTITFP--SGIKALADYVHGKGLKLGIYSDA 178 (455)
Q Consensus 107 e~~i~~~-ad~~~~~gl~~~G~~~~~iDDGW~~~-----~rd~~G~~~~d~~~FP--~Gl~~l~~~v~~~G~k~Glw~~p 178 (455)
-+.+.+. ++.+ +++||+.|.|=-=.+.. +-+..+...+++ +|- +.|+.||+.+|++||++=|=+-+
T Consensus 264 ~~~i~~~l~~yl-----k~LGv~~i~L~Pi~e~~~~~~~GY~~~~y~ai~~-~~Gt~~dfk~lV~~~H~~Gi~VilD~V~ 337 (726)
T PRK05402 264 YRELADQLIPYV-----KEMGFTHVELLPIAEHPFDGSWGYQPTGYYAPTS-RFGTPDDFRYFVDACHQAGIGVILDWVP 337 (726)
T ss_pred HHHHHHHHHHHH-----HHcCCCEEEECCcccCCCCCCCCCCcccCCCcCc-ccCCHHHHHHHHHHHHHCCCEEEEEECC
Confidence 3444444 4666 78999888764322211 111112233443 332 36999999999999997653322
Q ss_pred C--------------c----------------ccc---CCCCcccccHHhHHHHH-HhcCCcEEEeecC
Q 012852 179 G--------------V----------------FTC---QVRPGSLFHEKDDAPLF-ASWGVDYLKYDNC 213 (455)
Q Consensus 179 g--------------~----------------~~c---~~~Pg~~~~~~~~~~~~-~~wGidylK~D~~ 213 (455)
. . .+| ..+|.+++|+...+..+ .++|||.+.+|..
T Consensus 338 NH~~~~~~~~~~~~~~~~y~~~~~~~~~~~~w~~~~~n~~~~~v~~~l~~~~~~W~~e~~iDG~R~D~v 406 (726)
T PRK05402 338 AHFPKDAHGLARFDGTALYEHADPREGEHPDWGTLIFNYGRNEVRNFLVANALYWLEEFHIDGLRVDAV 406 (726)
T ss_pred CCCCCCccchhccCCCcceeccCCcCCccCCCCCccccCCCHHHHHHHHHHHHHHHHHhCCcEEEECCH
Confidence 1 0 000 23566777776666665 5799999999963
|
|
| >PF01120 Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR000933 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=90.75 E-value=2.6 Score=43.37 Aligned_cols=84 Identities=18% Similarity=0.157 Sum_probs=53.1
Q ss_pred HHHHHHHHHhcCCeEEEEecCCccccCCCC--------c-------ccccH-----HhHHHHHHhcCCcEEEeecCCCCC
Q 012852 158 IKALADYVHGKGLKLGIYSDAGVFTCQVRP--------G-------SLFHE-----KDDAPLFASWGVDYLKYDNCFNLG 217 (455)
Q Consensus 158 l~~l~~~v~~~G~k~Glw~~pg~~~c~~~P--------g-------~~~~~-----~~~~~~~~~wGidylK~D~~~~~~ 217 (455)
+++|++.+++.|||||+|+.+.....+..+ + ...|+ .+.-+++..+.+|.|=+|......
T Consensus 140 v~El~~A~rk~Glk~G~Y~S~~dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~EL~~~Y~~d~lWfDg~~~~~ 219 (346)
T PF01120_consen 140 VGELADACRKYGLKFGLYYSPWDWHHPDYPPDEEGDENGPADGPGNWQRYYNEYWLAQLRELLTRYKPDILWFDGGWPDP 219 (346)
T ss_dssp HHHHHHHHHHTT-EEEEEEESSSCCCTTTTSSCHCHHCC--HCCHHHHHHHHHHHHHHHHHHHHCSTESEEEEESTTSCC
T ss_pred HHHHHHHHHHcCCeEEEEecchHhcCcccCCCccCCcccccccchhhHhHhhhhhHHHHHHHHhCCCcceEEecCCCCcc
Confidence 799999999999999999998632111110 0 11122 344566778899999999876542
Q ss_pred CCccchhHHHHHHHHhcCCCeeEee
Q 012852 218 IEPKKRYPPMRDALNETGCSIFYSL 242 (455)
Q Consensus 218 ~~~~~~y~~m~~AL~~~G~~i~~~~ 242 (455)
.+ ...+..+.+.+++..+.+++..
T Consensus 220 ~~-~~~~~~~~~~i~~~qp~~ii~~ 243 (346)
T PF01120_consen 220 DE-DWDSAELYNWIRKLQPDVIINN 243 (346)
T ss_dssp CT-HHHHHHHHHHHHHHSTTSEEEC
T ss_pred cc-ccCHHHHHHHHHHhCCeEEEec
Confidence 21 2233556666667777777764
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Family 29 (GH29 from CAZY) encompasses alpha-L-fucosidases (3.2.1.51 from EC) [], which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Alpha-L-fucosidase is responsible for hydrolysing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Fucosylated glycoconjugates are involved in numerous biological events, making alpha-l-fucosidases, the enzymes responsible for their processing, critically important. Deficiency in alpha-l-fucosidase activity is associated with fucosidosis, a lysosomal storage disorder characterised by rapid neurodegeneration, resulting in severe mental and motor deterioration []. The enzyme is a hexamer and displays a two-domain fold, composed of a catalytic (beta/alpha)(8)-like domain and a C-terminal beta-sandwich domain []. Drosophila melanogaster spermatozoa contains an alpha-l-fucosidase that might be involved in fertilisation by interacting with alpha-l-fucose residues on the micropyle of the eggshell []. In human sperm, membrane-associated alpha-l-fucosidase is stable for extended periods of time, which is made possible by membrane domains and compartmentalisation. These help preserve protein integrity []. ; GO: 0004560 alpha-L-fucosidase activity, 0005975 carbohydrate metabolic process; PDB: 3EYP_B 2ZX6_A 2ZWY_B 2ZX8_B 2WSP_A 2ZXA_A 2ZWZ_B 1ODU_B 1HL9_A 2ZX5_B .... |
| >smart00812 Alpha_L_fucos Alpha-L-fucosidase | Back alignment and domain information |
|---|
Probab=90.47 E-value=3.4 Score=43.32 Aligned_cols=121 Identities=17% Similarity=0.119 Sum_probs=67.7
Q ss_pred cccCceEEEec----CCcCCCCCCCCCCcccCCCCCC-CCHHHHHHHHHhcCCeEEEEecCCcc-------------ccC
Q 012852 123 AELGYDHVNID----DCWSSPLRDLKGQLVPDTITFP-SGIKALADYVHGKGLKLGIYSDAGVF-------------TCQ 184 (455)
Q Consensus 123 ~~~G~~~~~iD----DGW~~~~rd~~G~~~~d~~~FP-~Gl~~l~~~v~~~G~k~Glw~~pg~~-------------~c~ 184 (455)
+++|.+|+||= ||+.-- .....+|.+-..-+- +=+++|++.+|+.|||||+|+.+-.. .+.
T Consensus 91 k~AGakY~vlTaKHHDGF~lw-~S~~t~~n~~~~~pkrDiv~el~~A~rk~Glk~G~Y~S~~DW~~p~y~~~~~~~~~~~ 169 (384)
T smart00812 91 KKAGAKYVVLTAKHHDGFCLW-DSKYSNWNAVDTGPKRDLVGELADAVRKRGLKFGLYHSLFDWFNPLYAGPTSSDEDPD 169 (384)
T ss_pred HHcCCCeEEeeeeecCCcccc-CCCCCCCcccCCCCCcchHHHHHHHHHHcCCeEEEEcCHHHhCCCccccccccccccc
Confidence 45788999983 343211 001123322111000 22899999999999999999986211 112
Q ss_pred CCCcccccH----HhHHHHHHhcCCcEEEeecCCCCCCCccchhHHHHHHHHhcCCCe---eEeeCCCC
Q 012852 185 VRPGSLFHE----KDDAPLFASWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSI---FYSLCEWG 246 (455)
Q Consensus 185 ~~Pg~~~~~----~~~~~~~~~wGidylK~D~~~~~~~~~~~~y~~m~~AL~~~G~~i---~~~~c~~g 246 (455)
..|...+|+ .+.-+++..+|-|.|=.|........ ......+.+-+....+.+ +++ ..|+
T Consensus 170 ~~~~~~~y~~~~~~Ql~ELit~Ygpd~lWfD~~~~~~~~-~~~~~~l~~~~~~~qP~~~~vvvn-~R~~ 236 (384)
T smart00812 170 NWPRFQEFVDDWLPQLRELVTRYKPDLLWFDGGWEAPDD-YWRSKEFLAWLYNLSPVKDTVVVN-DRWG 236 (384)
T ss_pred cchhHHHHHHHHHHHHHHHHhcCCCceEEEeCCCCCccc-hhcHHHHHHHHHHhCCCCceEEEE-cccc
Confidence 233344555 45667778899999999986432111 112344555555555554 665 3443
|
O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site PUBMED:. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis. |
| >PF14509 GH97_C: Glycosyl-hydrolase 97 C-terminal, oligomerisation; PDB: 3A24_A 2JKP_A 2JKE_A 2D73_B 2ZQ0_B 2JKA_A | Back alignment and domain information |
|---|
Probab=87.80 E-value=7.3 Score=33.13 Aligned_cols=74 Identities=15% Similarity=-0.003 Sum_probs=43.9
Q ss_pred eeEEEEEcC-CCcEEEEEEecCCCceeEEEEceecCCCCCCceEEEEccCCc--------cc-----cccccceEEEEEc
Q 012852 371 LQVWVGPLS-GHRLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHK--------QV-----TGDAVSSFGAQVD 436 (455)
Q Consensus 371 ~~vw~~~l~-dg~~avalfN~~~~~~~iti~l~~LGL~~~~~~~vrDlW~g~--------~~-----~g~~~~~l~~~L~ 436 (455)
.-|.++... +++++|+-.|-.+. ++++++|+.|+-. ..|.+.=+=.+. .. .-..++.+++.|.
T Consensus 16 yvviARr~~~G~~Wyvg~in~~~~-r~i~l~L~FL~~g--~~y~a~i~~D~~~a~~~~~~~~~~~~~~v~~~~~l~i~l~ 92 (103)
T PF14509_consen 16 YVVIARRKRDGDDWYVGGINGEDA-RTITLPLSFLDKG--KKYTATIYTDGPDADYTNPEAYKIETRKVTSGDKLTITLA 92 (103)
T ss_dssp EEEEEEEETTTTEEEEEEEE-TT--EEEEEEGCCS-TT----EEEEEEEE-TTTCTTCTT-EEEEEEEE-TT-EEEEEE-
T ss_pred EEEEEEEcCCCCCEEEEEeeCCCc-eEEEEECcccCCC--CcEEEEEEEeCCcccccCCcceEEEEEEECCCCEEEEEEe
Confidence 556677764 46899999997654 5599999988632 235543222222 11 0122467999999
Q ss_pred CCCEEEEEEEe
Q 012852 437 AHDCQMYIFTP 447 (455)
Q Consensus 437 pH~~~ll~ltp 447 (455)
|+|-.+++|+|
T Consensus 93 ~~GG~vi~~~p 103 (103)
T PF14509_consen 93 PGGGFVIRITP 103 (103)
T ss_dssp TT-EEEEEEEE
T ss_pred CCCcEEEEEEC
Confidence 99999999987
|
|
| >PF09260 DUF1966: Domain of unknown function (DUF1966); InterPro: IPR015340 Alpha-amylase is classified as family 13 of the glycosyl hydrolases and is present in archaea, bacteria, plants and animals | Back alignment and domain information |
|---|
Probab=85.62 E-value=7.8 Score=32.19 Aligned_cols=72 Identities=14% Similarity=0.173 Sum_probs=40.6
Q ss_pred eeEEEEEcCCCcEEEEEEecCC-CceeEEEEceecCCCCCCceEEEEccCCccccccccceEEEEEcCCCEEEEE
Q 012852 371 LQVWVGPLSGHRLVVALWNRCP-KAETITAQWDALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQVDAHDCQMYI 444 (455)
Q Consensus 371 ~~vw~~~l~dg~~avalfN~~~-~~~~iti~l~~LGL~~~~~~~vrDlW~g~~~~g~~~~~l~~~L~pH~~~ll~ 444 (455)
.-++.|.-.+++.++++.|.+. ....+++++...|+.++ -.|.|+++.++......+.+++.+..-.-++|.
T Consensus 8 ~~a~rKG~~g~qvi~vltN~Gs~~~~~~~~~v~~~~f~~g--~~v~dVlsc~~~tv~~~G~l~v~m~~G~P~Vl~ 80 (91)
T PF09260_consen 8 TIAFRKGPDGSQVIVVLTNQGSNSGGSYTLTVPNTGFSAG--TEVTDVLSCTSYTVDSNGTLTVPMSNGEPRVLY 80 (91)
T ss_dssp EEEEEESSTTT-EEEEEE-S-T-T---EEEEESS----TT---EEEETTTTEEEE--TTS-EEEEESTT--EEEE
T ss_pred EEEEEeCCCCCEEEEEEeCCCcCCCCcEEEEEcCCCCCCC--CEEEEEecCCEEEECCCCEEEEEEcCCceEEEE
Confidence 3455555444556667788887 57788888887777763 588999999887434578899999887777653
|
Alpha-amylase is an essential enzyme in alpha-glucan metabolism, acting to catalyse the hydrolysis of alpha-1,4-glucosidic bonds of glycogen, starch and related polysaccharides. Although all alpha-amylases possess the same catalytic function, they can vary with respect to sequence. In general, they are composed of three domains: a TIM barrel containing the active site residues and chloride ion-binding site (domain A), a long loop region inserted between the third beta strand and the alpha-helix of domain A that contains calcium-binding site(s) (domain B), and a C-terminal beta-sheet domain that appears to show some variability in sequence and length between amylases (domain C) []. Amylases have at least one conserved calcium-binding site, as calcium is essential for the stability of the enzyme. The chloride-binding functions to activate the enzyme, which acts by a two-step mechanism involving a catalytic nucleophile base (usually an Asp) and a catalytic proton donor (usually a Glu) that are responsible for the formation of the beta-linked glycosyl-enzyme intermediate. This domain is found in various fungal alpha-amylase proteins. Its exact function has not, as yet, been defined []. ; GO: 0004556 alpha-amylase activity, 0005509 calcium ion binding, 0016052 carbohydrate catabolic process; PDB: 2AAA_A 2GUY_A 2TAA_B 6TAA_A 2GVY_B 7TAA_A 3KWX_A. |
| >PF11941 DUF3459: Domain of unknown function (DUF3459); InterPro: IPR022567 This functionally uncharacterised domain is found in bacteria | Back alignment and domain information |
|---|
Probab=84.59 E-value=3.4 Score=33.25 Aligned_cols=54 Identities=9% Similarity=0.082 Sum_probs=32.4
Q ss_pred EEEcCCCcEEEEEEecCCCceeEEEEceecCCCCCCceEEEEccCCccccccccceEEEEEcCCCEEEE
Q 012852 375 VGPLSGHRLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQVDAHDCQMY 443 (455)
Q Consensus 375 ~~~l~dg~~avalfN~~~~~~~iti~l~~LGL~~~~~~~vrDlW~g~~~~g~~~~~l~~~L~pH~~~ll 443 (455)
.....++...++++|.+++++++. .. ...+-+|+.... ...+ .++|+||+++++
T Consensus 36 ~~r~~~~~~l~v~~Nls~~~~~~~---------~~--~~~~~l~~s~~~--~~~~--~~~L~p~~~~v~ 89 (89)
T PF11941_consen 36 FRRTGGGERLLVAFNLSDEPVTVP---------EG--PWGEVLFSSEPA--RAGG--AGTLPPWSVVVL 89 (89)
T ss_dssp EEEEETTEEEEEEEE-SSS-EEEE---------TS--CCEEEEEECSCS--SE----EEEE-TTEEEEE
T ss_pred EEEEcCCceEEEEEecCCCcEEcc---------CC--CCCeEEEcCCCc--cccc--CceECCCEEEEC
Confidence 344457778999999999887776 11 123455555432 2222 789999999875
|
It is about 110 amino acids in length and is found C-terminal to PF00128 from PFAM, PF02922 from PFAM. ; GO: 0033942 4-alpha-D-{(1->4)-alpha-D-glucano}trehalose trehalohydrolase activity; PDB: 2WC7_A 2WCS_A 2WKG_A 3M07_A 2PWD_A 1ZJB_A 2PWF_C 2PWE_A 2PWG_A 2PWH_A .... |
| >PF10438 Cyc-maltodext_C: Cyclo-malto-dextrinase C-terminal domain; InterPro: IPR019492 This domain is at the very C terminus of cyclo-malto-dextrinase proteins and consists of 8 beta strands, is largely globular and appears to help stabilise the active sites created by upstream domains, IPR015171 from INTERPRO, and IPR006047 from INTERPRO | Back alignment and domain information |
|---|
Probab=84.54 E-value=1.8 Score=34.97 Aligned_cols=66 Identities=15% Similarity=0.223 Sum_probs=41.1
Q ss_pred eeEEEEEcCCCcEEEEEEecCCCceeEEEEceec--CCCCCCceEEEEccCCccccccccceEEEEEcCCCEEEEEE
Q 012852 371 LQVWVGPLSGHRLVVALWNRCPKAETITAQWDAL--GLESSTKVSVRDLWQHKQVTGDAVSSFGAQVDAHDCQMYIF 445 (455)
Q Consensus 371 ~~vw~~~l~dg~~avalfN~~~~~~~iti~l~~L--GL~~~~~~~vrDlW~g~~~~g~~~~~l~~~L~pH~~~ll~l 445 (455)
.-|+.|... +..++++.|-+++++++ ++++. -|.. .-+.+|+-+|+.+ ..+. +++|+|.++.++.|
T Consensus 11 vYvYfR~~~-~~tVmVilN~n~~~~~l--dl~ry~E~l~~--~~~~~diltg~~i--~l~~--~l~l~~~~~~ILel 78 (78)
T PF10438_consen 11 VYVYFRYYD-GKTVMVILNKNDKEQTL--DLKRYAEVLGG--FTSAKDILTGKTI--DLSK--NLTLPPKSVLILEL 78 (78)
T ss_dssp EEEEEEEES-SEEEEEEEE-SSS-EEE--EGGGGHHHHTT----EEEETTT--EE--E-SS--EEEE-TTEEEEEEE
T ss_pred EEEEEEEcC-CCEEEEEEcCCCCCeEE--cHHHHHHhhCC--CcceEECCCCCEE--ecCC--cEEECCCceEEEEC
Confidence 567777764 45788999999987555 55433 1221 2378999999976 3333 68999999999875
|
Cyclo-malto-dextrinases hydrolyse cyclodextrans to maltose and glucose and catalyse trans-glycosylation of oligosaccharides to the C3-, C4- or C6-hydroxyl groups of various acceptor sugar molecules. ; PDB: 3EDK_B 3EDD_A 3EDJ_B 3EDE_A 1H3G_B 3EDF_B. |
| >TIGR02104 pulA_typeI pullulanase, type I | Back alignment and domain information |
|---|
Probab=81.87 E-value=12 Score=41.43 Aligned_cols=87 Identities=16% Similarity=0.174 Sum_probs=57.3
Q ss_pred CHHHHHHHHHhcCCeEEEEecC----------------Cc-------------ccc-----CCCCcccccHHhHHHHH-H
Q 012852 157 GIKALADYVHGKGLKLGIYSDA----------------GV-------------FTC-----QVRPGSLFHEKDDAPLF-A 201 (455)
Q Consensus 157 Gl~~l~~~v~~~G~k~Glw~~p----------------g~-------------~~c-----~~~Pg~~~~~~~~~~~~-~ 201 (455)
.||.||+.+|++||++=|=+-. .. ..| ..+|.+++|+...++.+ .
T Consensus 230 efk~lV~~~H~~Gi~VilDvV~NH~~~~~~~~f~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~v~~~i~~~~~~W~~ 309 (605)
T TIGR02104 230 ELKQMIQALHENGIRVIMDVVYNHTYSREESPFEKTVPGYYYRYNEDGTLSNGTGVGNDTASEREMMRKFIVDSVLYWVK 309 (605)
T ss_pred HHHHHHHHHHHCCCEEEEEEEcCCccCCCCCcccCCCCCeeEEECCCCCccCCCcccCCcccCCHHHHHHHHHHHHHHHH
Confidence 4999999999999997542211 00 011 13567778887666665 4
Q ss_pred hcCCcEEEeecCCCCCCCccchhHHHHHHHHhcCCCeeEeeCCCC
Q 012852 202 SWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWG 246 (455)
Q Consensus 202 ~wGidylK~D~~~~~~~~~~~~y~~m~~AL~~~G~~i~~~~c~~g 246 (455)
+.|||.+.+|..... +.+..+.+++++++..+++++-.-.|.
T Consensus 310 e~~iDGfR~D~~~~~---~~~~~~~~~~~~~~~~p~~~ligE~w~ 351 (605)
T TIGR02104 310 EYNIDGFRFDLMGIH---DIETMNEIRKALNKIDPNILLYGEGWD 351 (605)
T ss_pred HcCCCEEEEechhcC---CHHHHHHHHHHHHhhCCCeEEEEccCC
Confidence 799999999976432 234456788888777777665433454
|
Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 455 | ||||
| 1uas_A | 362 | Crystal Structure Of Rice Alpha-Galactosidase Lengt | 1e-138 | ||
| 3a5v_A | 397 | Crystal Structure Of Alpha-Galactosidase I From Mor | 2e-83 | ||
| 1ktb_A | 405 | The Structure Of Alpha-N-Acetylgalactosaminidase Le | 2e-76 | ||
| 3lrk_A | 479 | Structure Of Alfa-Galactosidase (Mel1) From Sacchar | 2e-73 | ||
| 3lrm_A | 479 | Structure Of Alfa-Galactosidase From Saccharomyces | 9e-73 | ||
| 1r46_A | 398 | Structure Of Human Alpha-galactosidase Length = 398 | 9e-69 | ||
| 3lx9_A | 404 | Interconversion Of Human Lysosomal Enzyme Specifici | 3e-68 | ||
| 3hg3_A | 404 | Human Alpha-Galactosidase Catalytic Mechanism 2. Su | 6e-68 | ||
| 3h53_A | 400 | Crystal Structure Of Human Alpha-N-Acetylgalactosam | 8e-66 | ||
| 1szn_A | 417 | The Structure Of Alpha-Galactosidase Length = 417 | 3e-65 | ||
| 3a21_A | 614 | Crystal Structure Of Streptomyces Avermitilis Beta- | 2e-58 | ||
| 3cc1_A | 433 | Crystal Structure Of A Putative Alpha-N-Acetylgalac | 2e-19 |
| >pdb|1UAS|A Chain A, Crystal Structure Of Rice Alpha-Galactosidase Length = 362 | Back alignment and structure |
|
| >pdb|3A5V|A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea Length = 397 | Back alignment and structure |
|
| >pdb|1KTB|A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase Length = 405 | Back alignment and structure |
|
| >pdb|3LRK|A Chain A, Structure Of Alfa-Galactosidase (Mel1) From Saccharomyces Cerevisiae Length = 479 | Back alignment and structure |
|
| >pdb|3LRM|A Chain A, Structure Of Alfa-Galactosidase From Saccharomyces Cerevisiae With Raffinose Length = 479 | Back alignment and structure |
|
| >pdb|1R46|A Chain A, Structure Of Human Alpha-galactosidase Length = 398 | Back alignment and structure |
|
| >pdb|3LX9|A Chain A, Interconversion Of Human Lysosomal Enzyme Specificities Length = 404 | Back alignment and structure |
|
| >pdb|3HG3|A Chain A, Human Alpha-Galactosidase Catalytic Mechanism 2. Substrate Bound Length = 404 | Back alignment and structure |
|
| >pdb|3H53|A Chain A, Crystal Structure Of Human Alpha-N-Acetylgalactosaminidase Length = 400 | Back alignment and structure |
|
| >pdb|1SZN|A Chain A, The Structure Of Alpha-Galactosidase Length = 417 | Back alignment and structure |
|
| >pdb|3A21|A Chain A, Crystal Structure Of Streptomyces Avermitilis Beta-L- Arabinopyranosidase Length = 614 | Back alignment and structure |
|
| >pdb|3CC1|A Chain A, Crystal Structure Of A Putative Alpha-N-Acetylgalactosaminidase (Bh1870) From Bacillus Halodurans C-125 At 2.00 A Resolution Length = 433 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 455 | |||
| 3a21_A | 614 | Putative secreted alpha-galactosidase; beta-alpha- | 1e-150 | |
| 1szn_A | 417 | Alpha-galactosidase; (beta/alpha)8 barrel,TWO doma | 1e-146 | |
| 1uas_A | 362 | Alpha-galactosidase; TIM-barrel, beta-alpha-barrel | 1e-146 | |
| 3lrk_A | 479 | Alpha-galactosidase 1; tetramer, GH27, glycoprotei | 1e-145 | |
| 3a5v_A | 397 | Alpha-galactosidase; beta/alpha barrel, N-glycosyl | 1e-143 | |
| 3hg3_A | 404 | Alpha-galactosidase A; glycoprotein, carbohydrate- | 1e-134 | |
| 1ktb_A | 405 | Alpha-N-acetylgalactosaminidase; glycoprotein, (be | 1e-134 | |
| 3cc1_A | 433 | BH1870 protein, putative alpha-N-acetylgalactosami | 1e-127 | |
| 2xn2_A | 732 | Alpha-galactosidase; hydrolase, glycosidase; HET: | 8e-29 | |
| 3mi6_A | 745 | Alpha-galactosidase; NESG, structural genomics, PS | 8e-19 | |
| 1zy9_A | 564 | Alpha-galactosidase; TM1192, struc genomics, joint | 7e-18 | |
| 2yfo_A | 720 | Alpha-galactosidase-sucrose kinase agask; hydrolas | 2e-15 | |
| 3a24_A | 641 | Alpha-galactosidase; glycoside hydrolase family 97 | 5e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-04 |
| >3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A* Length = 614 | Back alignment and structure |
|---|
Score = 439 bits (1130), Expect = e-150
Identities = 132/349 (37%), Positives = 175/349 (50%), Gaps = 23/349 (6%)
Query: 83 LNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRD 142
+ MGW SWN FA I ++IK+ DA V+ GL GY ++NID+ W RD
Sbjct: 4 TRQITVPSAPMGWASWNSFAAKIDYSVIKKQVDAFVAAGLPAAGYTYINIDEGWWQGTRD 63
Query: 143 LKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTC----------QVRPGSLFH 192
G + DT +P G+ A+ Y+H KGLK GIY+DAG C GS H
Sbjct: 64 SAGNITVDTAEWPGGMSAITAYIHSKGLKAGIYTDAGKDGCGYYYPTGRPAAPGSGSEGH 123
Query: 193 EKDDAPLFASWGVDYLKYDNCFN--LGIEPKKRYPPMRDA----LNETGCSIFYSLCEWG 246
D F++WG D++K D C G++ Y + DA TG + S+C WG
Sbjct: 124 YDQDMLQFSTWGFDFVKVDWCGGDAEGLDAATTYKSISDAVGRAAATTGRPLTLSICNWG 183
Query: 247 VDDPALWAGKVGNSWRTTGDIN--DTWASMTSIADINDK--WASYAGPGGWNDPDMLEVG 302
+P WA WRT+ DI SMTS+ D+ + G +NDPDML VG
Sbjct: 184 YQNPWNWAAGQAPLWRTSTDIIYYGNQPSMTSLLSNFDQTLHPTAQHTGYYNDPDMLMVG 243
Query: 303 NGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKV 362
G + + R H ++WA+ APLL G D+ MT+ET IL N EVIAV+QD G+QG KV
Sbjct: 244 MDGFTAAQNRTHMNLWAISGAPLLAGNDLTTMTSETAGILKNPEVIAVDQDSRGLQGVKV 303
Query: 363 YVSGTDNCLQVWVGPLSGH-RLVVALWNRCPKAETITAQWDALGLESST 410
LQ + LSG V L NR A IT +W LGL +++
Sbjct: 304 AEDT--TGLQAYGKVLSGTGNRAVVLLNRTSAAHDITVRWSDLGLTNAS 350
|
| >1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A* Length = 417 | Back alignment and structure |
|---|
Score = 422 bits (1086), Expect = e-146
Identities = 147/417 (35%), Positives = 202/417 (48%), Gaps = 50/417 (11%)
Query: 80 ILQLNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSP 139
I+ + P +GWNSWN + C+I E+ A+ +VS+GL + GY++VNIDDCWS
Sbjct: 1 IVMPDGVTGKVPSLGWNSWNAYHCDIDESKFLSAAELIVSSGLLDAGYNYVNIDDCWSMK 60
Query: 140 LRDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEKDDAPL 199
+ G + P+ FP GI LA VH GLKLGIYS AG TC P SL +E DA
Sbjct: 61 DGRVDGHIAPNATRFPDGIDGLAKKVHALGLKLGIYSTAGTATCAGYPASLGYEDVDAAD 120
Query: 200 FASWGVDYLKYDNCFN---------------------------------------LGIEP 220
FA WGVDYLKYDNC +
Sbjct: 121 FADWGVDYLKYDNCNVPSDWQDEYVACNPDFVKTGPNGTCTTALDPTLAPPGYDWSTSKS 180
Query: 221 KKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDTWASMTSIADI 280
+R+ MR+AL + I S+C WG D W G SWR + DI+ W S+T I ++
Sbjct: 181 AERFGAMRNALAKQSHEIVLSMCIWGQADVFSWGNSTGISWRMSDDISPNWGSVTRILNL 240
Query: 281 NDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFE 340
N + G ND DMLEVGNG ++ E R HF++WA MK+PLLIG D+ ++
Sbjct: 241 NSFKLNSVDFWGHNDADMLEVGNGNLTAAETRTHFALWAAMKSPLLIGTDLAQLSQNNIN 300
Query: 341 ILSNKEVIAVNQDPLGVQGRKVYVSGTD--------NCLQVWVGPLSGHRLVVALWNRCP 392
+L NK ++A NQD + Q Y G + + W GP S +V + N
Sbjct: 301 LLKNKHLLAFNQDSVYGQPATPYKWGINPDWTFNVTYPAEFWAGPSSKGH-LVLMVNTLD 359
Query: 393 KAETITAQWDALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQVDAHDCQMYIFTPRT 449
T A+W+ + S+ VRD+W K + +SS+ A V AHD + + +
Sbjct: 360 ITATKEAKWNEIPGLSAGHYEVRDVWSDKDLG--CLSSYKAAVAAHDTAVILVGKKC 414
|
| >1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1 Length = 362 | Back alignment and structure |
|---|
Score = 419 bits (1079), Expect = e-146
Identities = 235/366 (64%), Positives = 268/366 (73%), Gaps = 6/366 (1%)
Query: 83 LNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRD 142
NGL TPQMGWNSWN F C I+E II+ETADALV+TGLA+LGY +VNIDDCW+ RD
Sbjct: 1 FENGLGRTPQMGWNSWNHFYCGINEQIIRETADALVNTGLAKLGYQYVNIDDCWAEYSRD 60
Query: 143 LKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVR-PGSLFHEKDDAPLFA 201
+G VP+ TFPSGIKALADYVH KGLKLGIYSDAG TC + PGSL HE+ D FA
Sbjct: 61 SQGNFVPNRQTFPSGIKALADYVHAKGLKLGIYSDAGSQTCSNKMPGSLDHEEQDVKTFA 120
Query: 202 SWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSW 261
SWGVDYLKYDNC + G +RY M +A+ G +IF+SLCEWG ++PA WAG++GNSW
Sbjct: 121 SWGVDYLKYDNCNDAGRSVMERYTRMSNAMKTYGKNIFFSLCEWGKENPATWAGRMGNSW 180
Query: 262 RTTGDINDTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALM 321
RTTGDI D W SMTS AD ND+WA+YAGPGGWNDPDMLEVGNGGMS EYR+HFSIWAL
Sbjct: 181 RTTGDIADNWGSMTSRADENDQWAAYAGPGGWNDPDMLEVGNGGMSEAEYRSHFSIWALA 240
Query: 322 KAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVYVSGTDNCLQVWVGPLSGH 381
KAPLLIGCDVR+M+ +T ILSN EVIAVNQD LGVQG+KV L+VW GPLS +
Sbjct: 241 KAPLLIGCDVRSMSQQTKNILSNSEVIAVNQDSLGVQGKKVQSDN---GLEVWAGPLSNN 297
Query: 382 RLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQVDAHDCQ 441
R V LWNR TITA W +GL S V+ RDLW H A A V HDC+
Sbjct: 298 RKAVVLWNRQSYQATITAHWSNIGLAGSVAVTARDLWAHSSFA--AQGQISASVAPHDCK 355
Query: 442 MYIFTP 447
MY+ TP
Sbjct: 356 MYVLTP 361
|
| >3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A* Length = 479 | Back alignment and structure |
|---|
Score = 421 bits (1084), Expect = e-145
Identities = 151/417 (36%), Positives = 219/417 (52%), Gaps = 43/417 (10%)
Query: 75 TSNYGILQLNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDD 134
+G+ NGL TPQMGW++WN FAC++SE ++ +TAD + GL ++GY ++ +DD
Sbjct: 14 KGVFGVSPSYNGLGLTPQMGWDNWNTFACDVSEQLLLDTADRISDLGLKDMGYKYIILDD 73
Query: 135 CWSSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEK 194
CWSS RD G LV D FP+G+ +AD++H G+YS AG +TC PGSL E+
Sbjct: 74 CWSSG-RDSDGFLVADEQKFPNGMGHVADHLHNNSFLFGMYSSAGEYTCAGYPGSLGREE 132
Query: 195 DDAPLFASWGVDYLKYDNCFNLGI-----EPKKRYPPMRDALNETGCSIFYSLCEWGVDD 249
+DA FA+ VDYLKYDNC+N G RY M DALN+TG +FYSLC WG D
Sbjct: 133 EDAQFFANNRVDYLKYDNCYNKGQFGTPEISYHRYKAMSDALNKTGRPVFYSLCNWGQDL 192
Query: 250 PALWAGKVGNSWRTTGDINDTWA----------------------SMTSIADINDKWASY 287
W + NSWR +GD+ + S+ +I +
Sbjct: 193 TFYWGSGIANSWRMSGDVTAEFTRPDSRCPCDGDEYDCKYAGFHCSIMNILNKAAPMGQN 252
Query: 288 AGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEV 347
AG GGWND D LEVG G ++ E +AHFS+WA++K+PL+IG +V N+ A ++ I S V
Sbjct: 253 AGVGGWNDLDNLEVGVGNLTDDEEKAHFSMWAMVKSPLIIGANVNNLKASSYSIYSQASV 312
Query: 348 IAVNQDPLGVQGRKVY-------VSGTDNCLQVWVGPLSGHRLVVALWNRCPKAETITAQ 400
IA+NQD G+ +V+ +Q+W GPL VVAL N + +
Sbjct: 313 IAINQDSNGIPATRVWRYYVSDTDEYGQGEIQMWSGPLDNGDQVVALLNGGSVSRPMNTT 372
Query: 401 WDALGLES-------STKVSVRDLWQHKQVTGDAVSSFGAQVDAHDCQMYIFTPRTV 450
+ + +S ++ + DLW ++ V S+ + +Y T ++
Sbjct: 373 LEEIFFDSNLGSKKLTSTWDIYDLWANR-VDNSTASAILGRNKTATGILYNATEQSY 428
|
| >3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea} Length = 397 | Back alignment and structure |
|---|
Score = 414 bits (1065), Expect = e-143
Identities = 169/395 (42%), Positives = 226/395 (57%), Gaps = 35/395 (8%)
Query: 84 NNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDL 143
NNGLA TPQMGWN+WN + CN+ E +I + A A+ S+GL +LGY++V IDDCW R+
Sbjct: 2 NNGLAITPQMGWNTWNKYGCNVDEQLILDAAKAIASSGLKDLGYNYVIIDDCWQKNERES 61
Query: 144 KGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEKDDAPLFASW 203
L+ D FP GIK L D +H GLK GIYS AG TC SL +E DA +A W
Sbjct: 62 SKTLLADPTKFPRGIKPLVDDIHNLGLKAGIYSSAGTLTCGGHIASLGYEDIDAKTWAKW 121
Query: 204 GVDYLKYDNCFNLGI-----EPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVG 258
G+DYLKYDNC+N G RY M +ALN+TG + YSLC WG D P +A +
Sbjct: 122 GIDYLKYDNCYNQGQSGTPKLSYDRYKAMGNALNKTGRPMLYSLCNWGEDGPWNFASTIS 181
Query: 259 NSWRTTGDINDTW--------------------ASMTSIADINDKWASYAGPGGWNDPDM 298
NSWR +GD+ D + S+ +I + + A GGWND DM
Sbjct: 182 NSWRISGDVYDNFNRPDPACPCTTYDCVLAGFRCSVMNIINKAVAVSQKARSGGWNDLDM 241
Query: 299 LEVGNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQ 358
LEVGNGGM+ +EYR H++IWA +K+PL++G DV N+T T EI+ NKEVIAVNQD
Sbjct: 242 LEVGNGGMNQEEYRVHYTIWAALKSPLILGNDVTNITNTTKEIIMNKEVIAVNQDSSFSP 301
Query: 359 GRKVYVSGTDNCLQVWVGPLSGHRLVVALWNRCPKAETITAQWDAL------GLESSTKV 412
+++V G Q++ G L+ + VV L N A +TA WD + ++SS +
Sbjct: 302 ANRIWVKG---DQQLFSGNLANNTQVVILLNAGDSAAKMTATWDDIWVYNLPNVDSSRSI 358
Query: 413 SVRDLWQHKQVTGDAVSSFGAQVDAHDCQMYIFTP 447
VRDLW+ K + G+ + V AH ++ F
Sbjct: 359 EVRDLWKQKSL-GNFSNHITLDVPAHGVRLLKFMD 392
|
| >3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A* Length = 404 | Back alignment and structure |
|---|
Score = 392 bits (1008), Expect = e-134
Identities = 148/392 (37%), Positives = 207/392 (52%), Gaps = 31/392 (7%)
Query: 83 LNNGLASTPQMGWNSWNFFACN----------ISETIIKETADALVSTGLAELGYDHVNI 132
L+NGLA TP MGW W F CN ISE + E A+ +VS G + GY+++ I
Sbjct: 1 LDNGLARTPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCI 60
Query: 133 DDCWSSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFH 192
DDCW +P RD +G+L D FP GI+ LA+YVH KGLKLGIY+D G TC PGS +
Sbjct: 61 DDCWMAPQRDSEGRLQADPQRFPHGIRQLANYVHSKGLKLGIYADVGNKTCAGFPGSFGY 120
Query: 193 EKDDAPLFASWGVDYLKYDNCFNLGIE-PKKRYPPMRDALNETGCSIFYSLCEWGV---- 247
DA FA WGVD LK+ C+ +E Y M ALN TG SI YS CEW +
Sbjct: 121 YDIDAQTFADWGVDLLKFAGCYCDSLENLADGYKHMSLALNRTGRSIVYS-CEWPLYMWP 179
Query: 248 --DDPALWAGKVGNSWRTTGDINDTWASMTSIAD----INDKWASYAGPGGWNDPDMLEV 301
+ N WR DI+D+W S+ SI D ++ AGPGGWNDPDML +
Sbjct: 180 FQKPNYTEIRQYCNHWRNFADIDDSWKSIKSILDWTSFNQERIVDVAGPGGWNDPDMLVI 239
Query: 302 GNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRK 361
GN G+S+ + ++WA+M APL + D+R+++ + +L +K+VIA+NQDPLG QG +
Sbjct: 240 GNFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQDPLGKQGYQ 299
Query: 362 VYVSGTDNCLQVWVGPLSGHRLVVALWNRCPKAE--TITAQWDALGLESST---KVSVRD 416
+ + +VW PLSG VA+ NR + T +LG + +
Sbjct: 300 LR---QGDNFEVWERPLSGLAWAVAMINRQEIGGPRSYTIAVASLGKGVACNPACFITQL 356
Query: 417 LWQHKQV-TGDAVSSFGAQVDAHDCQMYIFTP 447
L +++ + S + ++ +
Sbjct: 357 LPVKRKLGFYEWTSRLRSHINPTGTVLLQLEN 388
|
| >1ktb_A Alpha-N-acetylgalactosaminidase; glycoprotein, (beta/alpha)8 barrel, hydrolase; HET: NAG; 1.90A {Gallus gallus} SCOP: b.71.1.1 c.1.8.1 PDB: 1ktc_A* 3h55_A* 3h54_A* 3h53_A* 3igu_A* Length = 405 | Back alignment and structure |
|---|
Score = 392 bits (1008), Expect = e-134
Identities = 156/395 (39%), Positives = 213/395 (53%), Gaps = 27/395 (6%)
Query: 83 LNNGLASTPQMGWNSWNFFACNI----------SETIIKETADALVSTGLAELGYDHVNI 132
L NGLA TP MGW +W F CN+ SE + E AD + G ELGY ++NI
Sbjct: 1 LENGLARTPPMGWLAWERFRCNVNCREDPRQCISEMLFMEMADRIAEDGWRELGYKYINI 60
Query: 133 DDCWSSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLF- 191
DDCW++ RD +G+LVPD FP GIKALADYVH +GLKLGIY D G TC PG+
Sbjct: 61 DDCWAAKQRDAEGRLVPDPERFPRGIKALADYVHARGLKLGIYGDLGRLTCGGYPGTTLD 120
Query: 192 HEKDDAPLFASWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPA 251
+ DA FA WGVD LK D C++ G E + YP M ALN TG I YS C W
Sbjct: 121 RVEQDAQTFAEWGVDMLKLDGCYSSGKEQAQGYPQMARALNATGRPIVYS-CSWPAYQGG 179
Query: 252 L-------WAGKVGNSWRTTGDINDTWASMTSIADI----NDKWASYAGPGGWNDPDMLE 300
L G++ N WR DI D+W S+ SI D D +AGPG WNDPDML
Sbjct: 180 LPPKVNYTLLGEICNLWRNYDDIQDSWDSVLSIVDWFFTNQDVLQPFAGPGHWNDPDMLI 239
Query: 301 VGNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGR 360
+GN G+SY++ R+ ++W +M APLL+ D+R ++ +IL N+ +I +NQDPLG+QGR
Sbjct: 240 IGNFGLSYEQSRSQMALWTIMAAPLLMSTDLRTISPSAKKILQNRLMIQINQDPLGIQGR 299
Query: 361 KVYVSGTDNCLQVWVGPLSGHRLVVALWNRCP-KAETITAQWDALGLESSTKVSVRDLWQ 419
++ G+ +V++ PLS + ++R T LG V+D++
Sbjct: 300 RIIKEGSHI--EVFLRPLSQAASALVFFSRRTDMPFRYTTSLAKLGFPMGAAYEVQDVYS 357
Query: 420 HKQV-TGDAVSSFGAQVDAHDCQMYIFTPRTVTRS 453
K + +F ++ M+ P+ +
Sbjct: 358 GKIISGLKTGDNFTVIINPSGVVMWYLCPKALLIQ 392
|
| >3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125} Length = 433 | Back alignment and structure |
|---|
Score = 373 bits (959), Expect = e-127
Identities = 91/438 (20%), Positives = 162/438 (36%), Gaps = 79/438 (18%)
Query: 81 LQLNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPL 140
+++N A TP MGWNSW+ + +++E + A+ + + L + G++++ +D W P
Sbjct: 2 MEVNRLSALTPPMGWNSWDCYGASVTEEEVLGNAEYMAN-HLKKYGWEYIVVDIQWYEPT 60
Query: 141 R-------------DLKGQLVPDTITFPS-----GIKALADYVHGKGLKLGIYSDAGVFT 182
D G+L+P T FPS G K L+D +H GLK GI+ G+
Sbjct: 61 ANSSAYNPFAPLCMDEYGRLLPATNRFPSAKNGAGFKPLSDAIHDLGLKFGIHIMRGIPR 120
Query: 183 CQVRPGS-------LFHEKDDAPLFASWGVDYLKYDNC---------------------- 213
V S E W D D
Sbjct: 121 QAVYENSPVLGSTKTAREIAHTNSICPWNTDMYGVDPTKEGAQSYYNSLFELYAQWGVDF 180
Query: 214 --------FNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDP-ALWAGKVGNSWRTT 264
L + ++ A+ G + SL A N WR T
Sbjct: 181 VKVDDIAASRLYDTHLEEIKMIQRAIQACGRPMVLSLSPGPAPIKYAHHFKTNANMWRIT 240
Query: 265 GDINDTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNGG--------------MSYQE 310
D D W+ + + + + W + G G W D ML +G+ G + E
Sbjct: 241 DDFWDDWSLLYQMFERCEVWEKHIGTGHWPDCGMLPLGHIGIRSVDGPGGDRWTRFTKDE 300
Query: 311 YRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVYVSGTDNC 370
++WA+ +PL+ G ++R+ T +L+N+ ++++NQ + +
Sbjct: 301 QLTMMNLWAICHSPLMFGGELRDNDEWTLSLLTNEGILSINQKSVLNRFVYRE-----ED 355
Query: 371 LQVWVGPLSGHRLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQV-TGDAVS 429
W VAL+N + +T+ + D +G+ + V + ++W + +
Sbjct: 356 KVAWAANGRNGEAYVALFNLHDQQKTLQFRLDMVGIMET--VQLFNVWDRSFLQSLAPSE 413
Query: 430 SFGAQVDAHDCQMYIFTP 447
SF ++ H M +P
Sbjct: 414 SFQIELKPHQSMMLKLSP 431
|
| >2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A* Length = 732 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 8e-29
Identities = 65/406 (16%), Positives = 120/406 (29%), Gaps = 79/406 (19%)
Query: 85 NGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRD-- 142
+ N+W + +E +K D +LG + +DD W D
Sbjct: 327 KFKDQIRPVLVNNWEATYFDFNEDKLKTIVDKA-----KKLGLEMFVLDDGWFGHRDDDN 381
Query: 143 -LKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTC-----QVRPGSLFHEKDD 196
G FP+G+ ADYVH +GLK G++ + + + + P L H
Sbjct: 382 SSLGDWKVYKKKFPNGLGHFADYVHEQGLKFGLWFEPEMISYESNLYKEHPDYLXHVPGR 441
Query: 197 AP--------------------------LFASWGVDYLKYDNCFNLGIEPKKRYPP---- 226
P + S +DY+K+D +L + P
Sbjct: 442 KPCPSRNQYVLELGRKEVRDNIFEQMVKILDSKKIDYIKWDMNRSLSDIYESDLPADQQG 501
Query: 227 ------------MRDALNETGCSIFYSLCEWGVDDPALWA-GKVGNSWRTTGDINDTWAS 273
+ + L I + C G + W + D D
Sbjct: 502 EAYHRYVLGYYDLLNKLVTRYPDILFEGCSGGGGRFDVGQAYYTPQIWAS--DNTDAIER 559
Query: 274 MTSIADINDKWASYAGP---GGWNDPDMLEVGNGGMSYQEYRAHFSIWALMKAPLLIGCD 330
+ S P + NG ++ R ++W L D
Sbjct: 560 LKIQY-----GTSLVYPQSMMTSHVSVSPNEQNGRITPFNTRGAVAMW----GDLGYELD 610
Query: 331 VRNMTAETFEILSNKEVIAV--NQDPLGVQGRKVYVSGTDNCLQVW--VGPLSGHRLVVA 386
+ M+ E + + + + + G + + + W V + + VV
Sbjct: 611 LTKMSDEESDQV--VKQVTEYKKIREVTQFGTLYRLKASASNQCAWMMVDS-NKNEAVVT 667
Query: 387 LWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGDAVSSFG 432
+ N A+ + GL+ + ++L + GD + G
Sbjct: 668 VVNVMAHAQPYCTKTKLAGLDPDKR--YKNLETDEVFGGDELMHLG 711
|
| >3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} Length = 745 | Back alignment and structure |
|---|
Score = 88.6 bits (219), Expect = 8e-19
Identities = 49/301 (16%), Positives = 81/301 (26%), Gaps = 52/301 (17%)
Query: 93 MGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLK---GQLVP 149
+ N+W + +E + + LG + +DD W D G
Sbjct: 332 VLINNWEATYFDFNEAKLMTIVNQA-----KRLGIEMFVLDDGWFGHRDDDTTSLGDWFV 386
Query: 150 DTITFPSGIKALADYVHGKGLKLGIYSDAGVF-----TCQVRPGSLFHEKDDAP------ 198
D FP GI+ + VH +G+K G++ + + Q P L H P
Sbjct: 387 DQRKFPDGIEHFSQAVHQQGMKFGLWFEPEMVSVDSDLYQQHPDWLIHAPKSTPTPGRHQ 446
Query: 199 --------------------LFASWGVDYLKYDNCFNLGIEPKKRYPPMRD-ALNETGCS 237
+ S +DY+K+D R + L
Sbjct: 447 FVLDMARPEVVDYLFKLMSQMIESANLDYIKWDMNRYATEMFSSRLTSDQQLELPHRYIL 506
Query: 238 IFYSLCE-WGVDDPALWAGKVGNSWRTTGDINDTWASMTSIADIND--------KWASYA 288
Y L P + + +A +D D SY
Sbjct: 507 GVYQLYARLTQAYPNVLFESCASGGGRFDLGMMYYAPQAWTSDDTDAAERLLIQFGTSYG 566
Query: 289 GPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVI 348
P + V N M + L D+ M + + K+ +
Sbjct: 567 YPQAMMGAHVSAVPNDQM-GRITSLKTRGAVAFFGDLGYELDITKMAPTELDQV--KKQV 623
Query: 349 A 349
A
Sbjct: 624 A 624
|
| >1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13 Length = 564 | Back alignment and structure |
|---|
Score = 85.1 bits (210), Expect = 7e-18
Identities = 48/360 (13%), Positives = 98/360 (27%), Gaps = 79/360 (21%)
Query: 93 MGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTI 152
GW SW + +++ + ++ IDD + + D +
Sbjct: 197 TGWCSWYHYFLDLTWEETLKNLKL-----AKNFPFEVFQIDDAYEKDIGD----WLVTRG 247
Query: 153 TFPSGIKALADYVHGKGLKLGIYSDAGVFTC-----QVRPGSLFHEKDDAPL-------- 199
FP ++ +A + G GI++ + P + E + +
Sbjct: 248 DFP-SVEEMAKVIAENGFIPGIWTAPFSVSETSDVFNEHPDWVVKENGEPKMAYRNWNKK 306
Query: 200 ---------------------FASWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSI 238
G Y K D F + +++ G
Sbjct: 307 IYALDLSKDEVLNWLFDLFSSLRKMGYRYFKIDFLFAGAVPGERKKNITPIQAFRKG--- 363
Query: 239 FYSLCEWGVDD--------PALWAGKVGNSWRTTGDINDTWASMTSIADINDKWASYA-- 288
++ + +D P L A + R D W D A +A
Sbjct: 364 IETIRKAVGEDSFILGCGSPLLPAVGCVDGMRIGPDTAPFWGEHIE--DNGAPAARWALR 421
Query: 289 ---------GPGGWNDPD--MLEVGNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAE 337
NDPD +L ++ +E + ++ ++ D+ +
Sbjct: 422 NAITRYFMHDRFWLNDPDCLILREEKTDLTQKEKELYSYTCGVLDNMIIESDDLSLVRDH 481
Query: 338 TFEILSNKEVIA-------VNQDPLGVQGRKVYVSGTDNCLQVWVGPLSGHRLVVALWNR 390
++L KE + V ++ SGT + V L+ + +
Sbjct: 482 GKKVL--KETLELLGGRPRVQNIMSEDLRYEIVSSGTLSGNVKIVVDLNSREYHLEKEGK 539
|
| >2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* Length = 720 | Back alignment and structure |
|---|
Score = 77.8 bits (191), Expect = 2e-15
Identities = 59/389 (15%), Positives = 105/389 (26%), Gaps = 68/389 (17%)
Query: 93 MGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQL---VP 149
+ NSW + + I + A A LG D V +DD W D L
Sbjct: 331 VLINSWEAAYFDFTGDTIVDLAKEA-----ASLGIDMVVMDDGWFGKRNDDNSSLGDWQV 385
Query: 150 DTITFPSGIKALADYVHGKGLKLGIYSDAGVFTC-----QVRPGSLFHEKDDAP------ 198
+ + L VH +G+K GI+ + + + P + P
Sbjct: 386 NETKLGGSLAELITRVHEQGMKFGIWIEPEMINEDSDLYRAHPDWAIRIQGKKPVRSRNQ 445
Query: 199 --------------------LFASWGVDYLKYDNCFNLGIEPKKRYPPMR--------DA 230
+ +DY+K+D ++ +
Sbjct: 446 LLLDFSRKEVRDCVFDQICVVLDQGKIDYVKWDMNRSMADVYAGNLSYDYVLGVYDFMER 505
Query: 231 LNETGCSIFYSLC--EWGVDDPALWAGKVGNSWRTTGDINDTWASMTSIADINDKWASYA 288
L + C G D + W D D + T I S+
Sbjct: 506 LCSRYPDLLLEGCSGGGGRFDAGMLY-YSPQIW--CSDNTDAI-NRTRIQY----GTSFF 557
Query: 289 GPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVI 348
P + V N + + H M + ++ E + + +E I
Sbjct: 558 YPVSAMGAHVSAVPNHQ-TGRVTSFHTRGVTAMAGTFGYELNPALLSDEEKQQI--REQI 614
Query: 349 AV--NQDPLGVQGRKV-YVSGTDNCLQVW--VGPLSGHRLVVALWNRCPKAETITAQWDA 403
+ L +G + + W V +V++ +A T
Sbjct: 615 KTYKKYETLINEGTYWRLSDPFTDEIAAWMSVSE-EQDHALVSVVRLMAEANQATVYVRL 673
Query: 404 LGLESSTKVSVRDLWQHKQVTGDAVSSFG 432
GL+ +Q +G A+ G
Sbjct: 674 RGLKPDAVYLEEQ--SGRQYSGAALMHAG 700
|
| >3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron} Length = 641 | Back alignment and structure |
|---|
Score = 48.1 bits (114), Expect = 5e-06
Identities = 23/122 (18%), Positives = 43/122 (35%), Gaps = 19/122 (15%)
Query: 93 MGWNSWN-FFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDT 151
WN F ++ K D + G ++V +D+ W+ L+ Q+V +
Sbjct: 293 NDWNLDGVDFVTGVNNPTYKAYIDFA-----SANGIEYVILDEGWAVNLQADLMQVVKE- 346
Query: 152 ITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEKDDAPLFASWGVDYLKYD 211
+K L DY K + + +++ F + + +A GV K D
Sbjct: 347 ----IDLKELVDYAASKNVGIILWAGYHAFERDME--------NVCRHYAEMGVKGFKVD 394
Query: 212 NC 213
Sbjct: 395 FM 396
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.5 bits (99), Expect = 3e-04
Identities = 65/364 (17%), Positives = 102/364 (28%), Gaps = 122/364 (33%)
Query: 95 WNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITF 154
N+ + A N+S I+ T V+ L+ H+++D T+T
Sbjct: 254 QNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDH-------------HSMTLTP 300
Query: 155 PSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPG--SLFHE--KDDAPLFASWGVDYLKY 210
L Y+ + L + P S+ E +D A+W D K+
Sbjct: 301 DEVKSLLLKYLDCRPQDLP--REV----LTTNPRRLSIIAESIRDGL---ATW--DNWKH 349
Query: 211 DNCFNLG---------IEP---KKRYPPMRDALNETGCSIFYSLCEWGVDDPA-----LW 253
NC L +EP +K + S+F P +W
Sbjct: 350 VNCDKLTTIIESSLNVLEPAEYRKMF---DR------LSVF----PPSAHIPTILLSLIW 396
Query: 254 AGK-------VGNSWRTTGDINDTWASMT-SIADI--------NDKWA-------SYAGP 290
V N + T SI I +++A Y P
Sbjct: 397 FDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIP 456
Query: 291 GGWNDPDMLEVGNGGMSYQEYRA-HFSI------WALMKAPLLIGCDVRNMTAETFEILS 343
++ D++ Y + H L + L D R F L
Sbjct: 457 KTFDSDDLIPPYLDQYFYS-HIGHHLKNIEHPERMTLFRMVFL---DFR------F--LE 504
Query: 344 NKEVIAVNQDPLGVQGR-----------KVYVSGTDNCLQVWVGPLSGHRLVVALWNRCP 392
K I + G K Y+ DN + RLV A+ + P
Sbjct: 505 QK--IRHDSTAWNASGSILNTLQQLKFYKPYI--CDNDPKY-------ERLVNAILDFLP 553
Query: 393 KAET 396
K E
Sbjct: 554 KIEE 557
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 455 | |||
| 3hg3_A | 404 | Alpha-galactosidase A; glycoprotein, carbohydrate- | 100.0 | |
| 3lrk_A | 479 | Alpha-galactosidase 1; tetramer, GH27, glycoprotei | 100.0 | |
| 3a5v_A | 397 | Alpha-galactosidase; beta/alpha barrel, N-glycosyl | 100.0 | |
| 1szn_A | 417 | Alpha-galactosidase; (beta/alpha)8 barrel,TWO doma | 100.0 | |
| 1uas_A | 362 | Alpha-galactosidase; TIM-barrel, beta-alpha-barrel | 100.0 | |
| 4do4_A | 400 | Alpha-N-acetylgalactosaminidase; pharmacological c | 100.0 | |
| 3cc1_A | 433 | BH1870 protein, putative alpha-N-acetylgalactosami | 100.0 | |
| 3a21_A | 614 | Putative secreted alpha-galactosidase; beta-alpha- | 100.0 | |
| 4fnq_A | 729 | Alpha-galactosidase AGAB; glycoside hydrolase, hyd | 100.0 | |
| 1zy9_A | 564 | Alpha-galactosidase; TM1192, struc genomics, joint | 100.0 | |
| 2xn2_A | 732 | Alpha-galactosidase; hydrolase, glycosidase; HET: | 100.0 | |
| 2yfo_A | 720 | Alpha-galactosidase-sucrose kinase agask; hydrolas | 100.0 | |
| 3mi6_A | 745 | Alpha-galactosidase; NESG, structural genomics, PS | 100.0 | |
| 3a24_A | 641 | Alpha-galactosidase; glycoside hydrolase family 97 | 99.84 | |
| 2d73_A | 738 | Alpha-glucosidase SUSB; glycoside hydrolase family | 99.52 | |
| 2f2h_A | 773 | Putative family 31 glucosidase YICI; BETA8alpha8 b | 99.47 | |
| 2g3m_A | 693 | Maltase, alpha-glucosidase; hydrolase, glycoside h | 99.43 | |
| 4ba0_A | 817 | Alpha-glucosidase, putative, ADG31B; hydrolase; HE | 99.29 | |
| 2xvl_A | 1020 | Alpha-xylosidase, putative, XYL31A; hydrolase, gly | 99.21 | |
| 3nsx_A | 666 | Alpha-glucosidase; structural genomics, PSI-2, pro | 99.12 | |
| 3l4y_A | 875 | Maltase-glucoamylase, intestinal; glycoside hydrol | 99.1 | |
| 3lpp_A | 898 | Sucrase-isomaltase; glycoside hydrolase family 31, | 99.09 | |
| 3zss_A | 695 | Putative glucanohydrolase PEP1A; alpha-glucan bios | 98.42 | |
| 3top_A | 908 | Maltase-glucoamylase, intestinal; membrane, hydrol | 98.4 | |
| 3edf_A | 601 | FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c | 97.84 | |
| 2x2h_A | 1027 | Alpha-1,4-glucan lyase isozyme 1; anhydrofructose | 97.76 | |
| 1j0h_A | 588 | Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 | 97.5 | |
| 1ea9_C | 583 | Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A | 97.33 | |
| 2guy_A | 478 | Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; | 97.32 | |
| 1ua7_A | 422 | Alpha-amylase; beta-alpha-barrels, acarbose, greek | 97.25 | |
| 1ji1_A | 637 | Alpha-amylase I; beta/alpha barrel, hydrolase; 1.6 | 97.22 | |
| 1wzl_A | 585 | Alpha-amylase II; pullulan, GH-13, alpha-amylase f | 97.18 | |
| 2z1k_A | 475 | (NEO)pullulanase; hydrolase, structural genomics, | 97.16 | |
| 2wc7_A | 488 | Alpha amylase, catalytic region; CD/PUL-hydrolyzin | 97.03 | |
| 3dhu_A | 449 | Alpha-amylase; structural genomics, hydrolase, gly | 96.9 | |
| 4aee_A | 696 | Alpha amylase, catalytic region; hydrolase, hypert | 96.88 | |
| 1m7x_A | 617 | 1,4-alpha-glucan branching enzyme; alpha/beta barr | 96.63 | |
| 3k1d_A | 722 | 1,4-alpha-glucan-branching enzyme; mycobacterium t | 96.46 | |
| 4aie_A | 549 | Glucan 1,6-alpha-glucosidase; hydrolase, glycoside | 96.2 | |
| 1d3c_A | 686 | Cyclodextrin glycosyltransferase; alpha-amylase, p | 96.16 | |
| 1wpc_A | 485 | Glucan 1,4-alpha-maltohexaosidase; maltohexaose-pr | 96.16 | |
| 1cyg_A | 680 | Cyclodextrin glucanotransferase; glycosyltransfera | 96.04 | |
| 1qho_A | 686 | Alpha-amylase; glycoside hydrolase, starch degrada | 96.01 | |
| 3faw_A | 877 | Reticulocyte binding protein; TIM barrel, beta bar | 95.9 | |
| 3bmv_A | 683 | Cyclomaltodextrin glucanotransferase; glycosidase, | 95.69 | |
| 3bh4_A | 483 | Alpha-amylase; calcium, carbohydrate metabolism, g | 95.55 | |
| 1hvx_A | 515 | Alpha-amylase; hydrolase, glycosyltransferase, the | 95.46 | |
| 3ues_A | 478 | Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydr | 93.41 | |
| 2aaa_A | 484 | Alpha-amylase; glycosidase; 2.10A {Aspergillus nig | 90.57 | |
| 2bhu_A | 602 | Maltooligosyltrehalose trehalohydrolase; alpha-amy | 89.75 | |
| 3eyp_A | 469 | Putative alpha-L-fucosidase; structural genomics, | 89.5 | |
| 3m07_A | 618 | Putative alpha amylase; IDP00968, csgid, structura | 89.32 | |
| 1mxg_A | 435 | Alpha amylase; hyperthermostable, family 13 glycos | 87.5 | |
| 2wvv_A | 450 | Alpha-L-fucosidase; alpha-L-fucose, hydrolase, gly | 85.51 | |
| 3vgf_A | 558 | Malto-oligosyltrehalose trehalohydrolase; alpha/be | 85.01 | |
| 2dh2_A | 424 | 4F2 cell-surface antigen heavy chain; TIM-barrel, | 84.45 | |
| 2yih_A | 524 | CEL44C, xyloglucanase; hydrolase, GH44, endo-gluca | 83.4 | |
| 3gza_A | 443 | Putative alpha-L-fucosidase; NP_812709.1, structur | 80.84 | |
| 2zxd_A | 455 | Alpha-L-fucosidase, putative; TIM barrel, hydrolas | 80.76 | |
| 2y24_A | 383 | Xylanase; hydrolase, GH5 family, aldotetraouronic | 80.76 | |
| 2c7f_A | 513 | Alpha-L-arabinofuranosidase; glycosidase, xylan, a | 80.75 | |
| 1qw9_A | 502 | Arabinosidase, alpha-L-arabinofuranosidase; hydrol | 80.6 | |
| 4gqr_A | 496 | Pancreatic alpha-amylase; glycosyl hydrolase, diab | 80.49 | |
| 3czg_A | 644 | Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; | 80.02 |
| >3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-99 Score=778.96 Aligned_cols=363 Identities=41% Similarity=0.737 Sum_probs=336.8
Q ss_pred ccCCCCCCCceEEechhhhCcC----------CCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCcccCCC
Q 012852 83 LNNGLASTPQMGWNSWNFFACN----------ISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTI 152 (455)
Q Consensus 83 ~~~~~~~~pP~gwnSW~~~~~~----------i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~~~d~~ 152 (455)
++||++++||||||||++|+|+ |||+.|+++|++|+++||+++||+||+||||||...||.+|+|++|++
T Consensus 1 l~ngla~tppmGWnsW~~~~~~~d~~~~~~~~i~e~~i~~~ad~~~~~Gl~~~G~~~~~iDDgW~~~~rd~~G~~~~~~~ 80 (404)
T 3hg3_A 1 LDNGLARTPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRLQADPQ 80 (404)
T ss_dssp CCSSCCSSCCEEEESHHHHTTCCCTTTCTTTSSSHHHHHHHHHHHHHTTHHHHTCCEEECCSSCBCSSCCTTSCCCBCTT
T ss_pred CCCCCCCCCceEEEcHhhhccCccccccccCCcCHHHHHHHHHHHHHCCcHhhCCeEEEECCCcCCCCCCCCCCeeeChh
Confidence 3678999999999999999998 799999999999999999999999999999999988999999999999
Q ss_pred CCCCCHHHHHHHHHhcCCeEEEEecCCccccCCCCcccccHHhHHHHHHhcCCcEEEeecCCCCCCC-ccchhHHHHHHH
Q 012852 153 TFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEKDDAPLFASWGVDYLKYDNCFNLGIE-PKKRYPPMRDAL 231 (455)
Q Consensus 153 ~FP~Gl~~l~~~v~~~G~k~Glw~~pg~~~c~~~Pg~~~~~~~~~~~~~~wGidylK~D~~~~~~~~-~~~~y~~m~~AL 231 (455)
|||+||++|+++||++|||||||+++|..+|.++||+++|+++++++|++|||||||+|+|+..... ..++|.+|++||
T Consensus 81 kFP~Gl~~l~~~ih~~Glk~Giw~~~g~~tC~~~pGs~~~~~~da~~fa~WGvDylK~D~C~~~~~~~~~~~y~~m~~AL 160 (404)
T 3hg3_A 81 RFPHGIRQLANYVHSKGLKLGIYADVGNKTCAGFPGSFGYYDIDAQTFADWGVDLLKFAGCYCDSLENLADGYKHMSLAL 160 (404)
T ss_dssp TSTTHHHHHHHHHHHTTCEEEEEEESSSBCTTSSBCCTTCHHHHHHHHHHHTCCEEEEECCSCSCHHHHHHHHHHHHHHH
T ss_pred hcCCCHHHHHHHHHHCCCeeEEEecCCccccCCCCccHHHHHHHHHHHHHhCCcEEEecCcCCCcchhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999876544 567999999999
Q ss_pred HhcCCCeeEeeCCCCCC-----Ch-hhhhhhccCeeeecCCCCCChhHHHHHHHh----hcccccccCCCCcCCCCcccc
Q 012852 232 NETGCSIFYSLCEWGVD-----DP-ALWAGKVGNSWRTTGDINDTWASMTSIADI----NDKWASYAGPGGWNDPDMLEV 301 (455)
Q Consensus 232 ~~~G~~i~~~~c~~g~~-----~p-~~w~~~~~~~~Ris~Di~~~W~~~~~~~~~----~~~~~~~~g~g~~nDpDmL~v 301 (455)
+++||||+|+ |+||.. .| +.+..+++|+||+++||.+.|+++.++++. +..|+.+++||+|||||||+|
T Consensus 161 ~~tGRpi~~s-c~w~~~~~~~~~~~~~~~~~~~n~WR~~~Di~d~W~sv~~i~~~~~~~~~~~~~~agpG~wnDpDML~v 239 (404)
T 3hg3_A 161 NRTGRSIVYS-CEWPLYMWPFQKPNYTEIRQYCNHWRNFADIDDSWKSIKSILDWTSFNQERIVDVAGPGGWNDPDMLVI 239 (404)
T ss_dssp HHTTCCCEEE-ECTGGGGTTTSCCCHHHHHHHCSEEECSCCCCSSHHHHHHHHHHHHHTHHHHTTTCBTTBEEECCCBCT
T ss_pred HhcCCCEEEE-eCCCcccccccccchHHHhhhCcEEEecCCcCcchHHHHHHHHHHhhhhhhhHhhcCCCCcCCCcceec
Confidence 9999999999 998631 11 122357899999999999999999999874 356888999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCceeecCCCCCCCHHHHHhhccHhHHhhccCCCCCccEEeeecCCCCceeEEEEEcCCC
Q 012852 302 GNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVYVSGTDNCLQVWVGPLSGH 381 (455)
Q Consensus 302 g~~~lT~~E~rt~~slwa~~gsPL~is~Dl~~l~~~~~~lL~N~e~iainQd~lG~~~r~v~~~~~~~~~~vw~~~l~dg 381 (455)
|+.+||.+|+|+|||+|||++|||++|+||+++++++++||+|+||||||||++|+|+++|...++ .+||+++|++|
T Consensus 240 Gn~glT~~E~rthfslWai~~sPLiiG~Dl~~~~~~tl~iLtN~evIAinQD~lG~q~~~v~~~~~---~~VW~~~l~~g 316 (404)
T 3hg3_A 240 GNFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQDPLGKQGYQLRQGDN---FEVWERPLSGL 316 (404)
T ss_dssp TSSSCCHHHHHHHHHHHHHTTCCEEECSCTTSCCHHHHHHHTCHHHHHHHTCTTCCCCEEEEEETT---EEEEEEECSTT
T ss_pred CCCCCCHHHHHHHHHHHHHhcCceEecCCcccCCHHHHHHhcCHHHHhhhccccCCcceEEEecCC---eEEEEEECCCC
Confidence 999999999999999999999999999999999999999999999999999999999999988766 89999999999
Q ss_pred cEEEEEEecCC--CceeEEEEceecCC---CCCCceEEEEccCCccccccc--cceEEEEEcCCCEEEEEEEeCCc
Q 012852 382 RLVVALWNRCP--KAETITAQWDALGL---ESSTKVSVRDLWQHKQVTGDA--VSSFGAQVDAHDCQMYIFTPRTV 450 (455)
Q Consensus 382 ~~avalfN~~~--~~~~iti~l~~LGL---~~~~~~~vrDlW~g~~~~g~~--~~~l~~~L~pH~~~ll~ltp~~~ 450 (455)
+.||+|||+++ ++++++++|++||| .+...|+|||||+|+++ +.+ +++++++|+||+|+||||+|.+.
T Consensus 317 ~~aValfN~~~~~~~~~vtv~~~~lGl~~~~~~~~~~vrDLW~~~~l-g~~~~~~~~~~~V~pHg~~llrlt~~~~ 391 (404)
T 3hg3_A 317 AWAVAMINRQEIGGPRSYTIAVASLGKGVACNPACFITQLLPVKRKL-GFYEWTSRLRSHINPTGTVLLQLENTMQ 391 (404)
T ss_dssp CEEEEEEECCCSSSCEEEEEEGGGSGGGTTTSSEEEEEEEESSCEEE-EEEETTCEEEEEECTTCEEEEEEEEHHH
T ss_pred CEEEEEEEcCCCCCceEEEEEHHHcCCcccCCCCceEEEECCCCccc-ccccccceEEEEECCCeEEEEEEEcCCc
Confidence 99999999999 89999999999999 55568999999999998 654 47899999999999999999754
|
| >3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-97 Score=768.73 Aligned_cols=371 Identities=41% Similarity=0.767 Sum_probs=342.6
Q ss_pred cccccCCCCCCCceEEechhhhCcCCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCcccCCCCCCCCHH
Q 012852 80 ILQLNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIK 159 (455)
Q Consensus 80 ~~~~~~~~~~~pP~gwnSW~~~~~~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~~~d~~~FP~Gl~ 159 (455)
..++.|+++++||||||||++|+|++||+.|+++|+++++.||+++||+||+||||||. .||.+|+|++|++|||+||+
T Consensus 19 ~~a~~ngla~tPpmGWNSW~~~~~~i~e~~i~~~Ad~~~~~Gl~~~GyeyvvIDDGW~~-~rd~~G~~~~d~~kFP~Glk 97 (479)
T 3lrk_A 19 VSPSYNGLGLTPQMGWDNWNTFACDVSEQLLLDTADRISDLGLKDMGYKYIILDDCWSS-GRDSDGFLVADEQKFPNGMG 97 (479)
T ss_dssp CCCCSSSCCSSCCEEEESHHHHTTCCCHHHHHHHHHHHHHTTCGGGTCCEEECCSSCEE-EECTTSCEEECTTTCTTCHH
T ss_pred hhhhhCCCCCCCceEEEchHhhCcCCCHHHHHHHHHHHHhcCccccCceEEEECCcccc-ccCCCCCEecChhhcCCCHH
Confidence 35678899999999999999999999999999999999999999999999999999998 78999999999999999999
Q ss_pred HHHHHHHhcCCeEEEEecCCccccCCCCcccccHHhHHHHHHhcCCcEEEeecCCCCCCC-----ccchhHHHHHHHHhc
Q 012852 160 ALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEKDDAPLFASWGVDYLKYDNCFNLGIE-----PKKRYPPMRDALNET 234 (455)
Q Consensus 160 ~l~~~v~~~G~k~Glw~~pg~~~c~~~Pg~~~~~~~~~~~~~~wGidylK~D~~~~~~~~-----~~~~y~~m~~AL~~~ 234 (455)
+|+++||++|||||||++||..+|.++||+++|++.++++|++|||||||+|+|+..... ..++|..|++||+++
T Consensus 98 ~Lad~ih~~GlKfGIw~~pG~~tC~~~pGsl~~~~~da~~fa~WGVDylK~D~c~~~~~~~~~~~~~~~y~~m~~AL~~t 177 (479)
T 3lrk_A 98 HVADHLHNNSFLFGMYSSAGEYTCAGYPGSLGREEEDAQFFANNRVDYLKYDNCYNKGQFGTPEISYHRYKAMSDALNKT 177 (479)
T ss_dssp HHHHHHHHTTCEEEEEEESSSBCTTSSBCCTTCHHHHHHHHHHTTCCEEEEECTTCTTCCSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCeeEEEecCccccccCCCchhHHHHHHHHHHHHhCCcEEEEccCCCccccCCcchhHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999876432 257899999999999
Q ss_pred CCCeeEeeCCCCCCChhhhhhhccCeeeecCCCCCChh----------------------HHHHHHHhhcccccccCCCC
Q 012852 235 GCSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDTWA----------------------SMTSIADINDKWASYAGPGG 292 (455)
Q Consensus 235 G~~i~~~~c~~g~~~p~~w~~~~~~~~Ris~Di~~~W~----------------------~~~~~~~~~~~~~~~~g~g~ 292 (455)
||||+|++|+||...|..|..+++|+||+++||.+.|+ ++.++++.+..|+.+++||+
T Consensus 178 GRpI~~Slc~Wg~~~~~~w~~~~~n~WR~s~DI~d~W~~~~~~~~~~~~~~~~~~~g~~~sv~~i~~~~~~~~~~agpG~ 257 (479)
T 3lrk_A 178 GRPVFYSLCNWGQDLTFYWGSGIANSWRMSGDVTAEFTRPDSRCPCDGDEYDCKYAGFHCSIMNILNKAAPMGQNAGVGG 257 (479)
T ss_dssp CSCCEEEECSTTTTTHHHHSTTTCSEEECSSCBCSCSSCCCTTSCSCTTCSSCSCCCSCBCHHHHHHHHGGGGGGCBTTB
T ss_pred CCCeEEEeccCccCchhhhhhhhCCeeeecCCccccccccccccccccccccccccccchhHHHHHHHhhhhhhccCCCC
Confidence 99999999999988899999999999999999999997 57889999999999999999
Q ss_pred cCCCCccccCCCCCCHHHHHHHHHHHHHHhCceeecCCCCCCCHHHHHhhccHhHHhhccCCCCCccEEeeecC------
Q 012852 293 WNDPDMLEVGNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVYVSG------ 366 (455)
Q Consensus 293 ~nDpDmL~vg~~~lT~~E~rt~~slwa~~gsPL~is~Dl~~l~~~~~~lL~N~e~iainQd~lG~~~r~v~~~~------ 366 (455)
|||||||+||+++||.+|+|+||++|||++|||++|+||+++++++++||+|+||||||||++|+|++++.+..
T Consensus 258 wNDpDML~vGn~glT~~E~rthfslWai~~SPLiiG~DL~~~~~~tl~iLtN~evIAINQD~lG~q~~~v~~~~~~~~d~ 337 (479)
T 3lrk_A 258 WNDLDNLEVGVGNLTDDEEKAHFSMWAMVKSPLIIGANVNNLKASSYSIYSQASVIAINQDSNGIPATRVWRYYVSDTDE 337 (479)
T ss_dssp EEECCSBCTTSTTCCHHHHHHHHHHHHHTTCCEEECSCGGGCCHHHHHHHTCHHHHHHHTCTTCCCCEEEEEEECSCCCT
T ss_pred CCCCCeEeeCCCCCCHHHHHHHHHHHHHHcCceEecCCcccCCHHHHHHhcCHHHHHHhccccCCceEEEeeccCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999997621
Q ss_pred -CCCceeEEEEEcCCCcEEEEEEecCCCceeEEEEceecCCCC-------CCceEEEEccCCccccccc-----------
Q 012852 367 -TDNCLQVWVGPLSGHRLVVALWNRCPKAETITAQWDALGLES-------STKVSVRDLWQHKQVTGDA----------- 427 (455)
Q Consensus 367 -~~~~~~vw~~~l~dg~~avalfN~~~~~~~iti~l~~LGL~~-------~~~~~vrDlW~g~~~~g~~----------- 427 (455)
.++..+||+++|++|+.||+|||+++++++++++|++|||++ +..|+|||||+|++..++.
T Consensus 338 ~~~~~~~VW~~~l~~G~~aValfN~~~~~~~vtv~l~dlGL~~~~~~~~~~~~~~VrDLW~~~~~~~~~~~~~~~~~~~~ 417 (479)
T 3lrk_A 338 YGQGEIQMWSGPLDNGDQVVALLNGGSVSRPMNTTLEEIFFDSNLGSKKLTSTWDIYDLWANRVDNSTASAILGRNKTAT 417 (479)
T ss_dssp TSCCEEEEEEEECTTSCEEEEEEECSSSCEEEEECHHHHTTTCCTTCHHHHSCEEEEETTTTCCCHHHHHHHHTTSSCST
T ss_pred cCCCCcEEEEEECCCCCEEEEEEECCCCCEEEEEEHHHhCCCccccccccCCceEEEeccCCCCchHHHHHHHhCcCccc
Confidence 124589999999999999999999999999999999999977 4589999999987652111
Q ss_pred --------------------------------cceEEEEEcCCCEEEEEEEeCCcc
Q 012852 428 --------------------------------VSSFGAQVDAHDCQMYIFTPRTVT 451 (455)
Q Consensus 428 --------------------------------~~~l~~~L~pH~~~ll~ltp~~~~ 451 (455)
.|.++++|++|++++|||+.+...
T Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (479)
T 3lrk_A 418 GILYNATEQSYKDGLSKNDTRLFGQKIGSLSPNAILNTTVPAHGIAFYRLRPSSDY 473 (479)
T ss_dssp TTSCCTTTSCHHHHHHTTCHHHHCEEEEEECTTCCEEEEECTTEEEEEEEEEC---
T ss_pred cccccccccchhhccccCCchhhhceeeeecCCceEEEEecccceEEEEeeccccc
Confidence 167999999999999999988764
|
| >3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-89 Score=707.87 Aligned_cols=364 Identities=46% Similarity=0.832 Sum_probs=343.3
Q ss_pred cCCCCCCCceEEechhhhCcCCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCcccCCCCCCCCHHHHHH
Q 012852 84 NNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIKALAD 163 (455)
Q Consensus 84 ~~~~~~~pP~gwnSW~~~~~~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~~~d~~~FP~Gl~~l~~ 163 (455)
.|+++++||||||||+++++++||+.++++||++++.||+++||+||+|||||+...||.+|+|++|++|||+||++|++
T Consensus 2 ~~gla~~pp~gwnsW~~~~~~~~e~~i~~~ad~~~~~gl~~~G~~~~~iDdgW~~~~r~~~G~~~~~~~kFP~Gl~~l~~ 81 (397)
T 3a5v_A 2 NNGLAITPQMGWNTWNKYGCNVDEQLILDAAKAIASSGLKDLGYNYVIIDDCWQKNERESSKTLLADPTKFPRGIKPLVD 81 (397)
T ss_dssp CSSCCSSCCEEEESHHHHGGGCCHHHHHHHHHHHHHHTHHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTCTTCHHHHHH
T ss_pred CCCcCCCCCEEEECHHHhCcCCCHHHHHHHHHHHHHcCCcccCceEEEECCCcCCCCCCCCCCeEEChhcCCcCHHHHHH
Confidence 47889999999999999999999999999999999999999999999999999987788999999999999999999999
Q ss_pred HHHhcCCeEEEEecCCccccCCCCcccccHHhHHHHHHhcCCcEEEeecCCCCCCC-----ccchhHHHHHHHHhcCCCe
Q 012852 164 YVHGKGLKLGIYSDAGVFTCQVRPGSLFHEKDDAPLFASWGVDYLKYDNCFNLGIE-----PKKRYPPMRDALNETGCSI 238 (455)
Q Consensus 164 ~v~~~G~k~Glw~~pg~~~c~~~Pg~~~~~~~~~~~~~~wGidylK~D~~~~~~~~-----~~~~y~~m~~AL~~~G~~i 238 (455)
+||++|||||||++||..+|.++||+++|+++++++|++|||||||+|||...... ..++|..|.++|++++++|
T Consensus 82 ~i~~~Glk~Giw~~pg~~tc~~~pg~~~~~~~~~~~~~~wGvdyvK~D~~~~~~~~~~~~~~~~~y~~m~~~L~~~~~~i 161 (397)
T 3a5v_A 82 DIHNLGLKAGIYSSAGTLTCGGHIASLGYEDIDAKTWAKWGIDYLKYDNCYNQGQSGTPKLSYDRYKAMGNALNKTGRPM 161 (397)
T ss_dssp HHHHTTCEEEEEEESSSBCTTSCBCCTTCHHHHHHHHHHHTCCEEEEECTTCTTCCSSHHHHHHHHHHHHHHHHHTCSCC
T ss_pred HHHHcCCEEEEEecCCCCccCCCHHHHHHHHHHHHHHHHcCCCEEEECCCcCCCcCCCcchhHHHHHHHHHHHHhhCCCc
Confidence 99999999999999999999999999999999999999999999999999876432 2578999999999999999
Q ss_pred eEeeCCCCCCChhhhhhhccCeeeecCCCCCChh--------------------HHHHHHHhhcccccccCCCCcCCCCc
Q 012852 239 FYSLCEWGVDDPALWAGKVGNSWRTTGDINDTWA--------------------SMTSIADINDKWASYAGPGGWNDPDM 298 (455)
Q Consensus 239 ~~~~c~~g~~~p~~w~~~~~~~~Ris~Di~~~W~--------------------~~~~~~~~~~~~~~~~g~g~~nDpDm 298 (455)
++++|+||...|..|..+++|+||+++|+.+.|+ ++.++++.+..++.+++|++||||||
T Consensus 162 ~~~~c~~G~~~~~~w~~~~~n~wR~s~Di~~~w~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~pg~~nD~Dm 241 (397)
T 3a5v_A 162 LYSLCNWGEDGPWNFASTISNSWRISGDVYDNFNRPDPACPCTTYDCVLAGFRCSVMNIINKAVAVSQKARSGGWNDLDM 241 (397)
T ss_dssp EEEECSTTTTCHHHHSTTTCSEEECSSCBCSCSSCCCTTSCCCSSCCSCCCSCBCHHHHHHHHHHHGGGCBTTBEEECCC
T ss_pred EEEeccCCCCchhhHHhhcCcEEEEcCCcCCccccccccccccccccccccccchHHHHHHHhhhhHhhcCCCccCCccc
Confidence 9999999988888999999999999999999998 57888888888899999999999999
Q ss_pred cccCCCCCCHHHHHHHHHHHHHHhCceeecCCCCCCCHHHHHhhccHhHHhhccCCCCCccEEeeecCCCCceeEEEEEc
Q 012852 299 LEVGNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVYVSGTDNCLQVWVGPL 378 (455)
Q Consensus 299 L~vg~~~lT~~E~rt~~slwa~~gsPL~is~Dl~~l~~~~~~lL~N~e~iainQd~lG~~~r~v~~~~~~~~~~vw~~~l 378 (455)
|++|++++|.+|+|+||++||+++|||++|+|++++++++++||+|+|+||+|||++|.+++++...++ .+||++++
T Consensus 242 l~vg~~~lt~~E~~~~~alwai~~sPL~~g~Dl~~~~~~~~~il~N~e~iai~qd~~g~~~~~v~~~g~---~~vw~~~l 318 (397)
T 3a5v_A 242 LEVGNGGMNQEEYRVHYTIWAALKSPLILGNDVTNITNTTKEIIMNKEVIAVNQDSSFSPANRIWVKGD---QQLFSGNL 318 (397)
T ss_dssp BCTTSSSSCHHHHHHHHHHHHHTTCCEEECSCSSSCCHHHHHHHCCHHHHHHHTCTTCCCCEEEEEETT---EEEEEEEE
T ss_pred cccCCCCCCHHHHHHHHHHHHHhcCceEecCchhhCCHHHHHHhcCHHHHhhccccccccceeeecCCC---ceEEEEEC
Confidence 999999999999999999999999999999999999999999999999999999999999999987765 89999999
Q ss_pred CCCcEEEEEEecCCCceeEEEEceecCC------CCCCceEEEEccCCccccccccceEEEEEcCCCEEEEEEEeCCcc
Q 012852 379 SGHRLVVALWNRCPKAETITAQWDALGL------ESSTKVSVRDLWQHKQVTGDAVSSFGAQVDAHDCQMYIFTPRTVT 451 (455)
Q Consensus 379 ~dg~~avalfN~~~~~~~iti~l~~LGL------~~~~~~~vrDlW~g~~~~g~~~~~l~~~L~pH~~~ll~ltp~~~~ 451 (455)
++|++||++||+++++++++++|++||+ ..+..|+|||||+|+++ +..+++++++|+||+|+||||+|.++.
T Consensus 319 ~~g~~~v~~~N~~~~~~~~~v~l~~lg~~~~~~~~~~~~~~v~DlW~~~~~-g~~~~~~~~~v~~hg~~l~~l~~~~~~ 396 (397)
T 3a5v_A 319 ANNTQVVILLNAGDSAAKMTATWDDIWVYNLPNVDSSRSIEVRDLWKQKSL-GNFSNHITLDVPAHGVRLLKFMDSATS 396 (397)
T ss_dssp TTTEEEEEEEECSSSCEEEEEEHHHHTGGGTTSBCTTCCEEEEETTTTEEE-EEECSEEEEEECTTEEEEEEESSCCBC
T ss_pred CCCCEEEEEEECCCCCeEEEEEHHHhcCccccccCCCCceEEEECCCCCcc-ccccceEEEEECCCeEEEEEEEecCCC
Confidence 9999999999999999999999999976 33568999999999998 888899999999999999999997653
|
| >1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-88 Score=703.89 Aligned_cols=362 Identities=41% Similarity=0.737 Sum_probs=337.7
Q ss_pred ccCC-CCCCCceEEechhhhCcCCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCcccCCCCCCCCHHHH
Q 012852 83 LNNG-LASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIKAL 161 (455)
Q Consensus 83 ~~~~-~~~~pP~gwnSW~~~~~~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~~~d~~~FP~Gl~~l 161 (455)
+.|| ++++||||||||++++|++||+.++++||++++.||+++||+||+||||||..+||..|+|++|++|||+||++|
T Consensus 3 ~~ng~~~~~ppmgwnsW~~~~~~~~e~~i~~~ad~~~~~gl~~~G~~~~~iDdgW~~~~~d~~G~~~~~~~kFP~Gl~~l 82 (417)
T 1szn_A 3 MPDGVTGKVPSLGWNSWNAYHCDIDESKFLSAAELIVSSGLLDAGYNYVNIDDCWSMKDGRVDGHIAPNATRFPDGIDGL 82 (417)
T ss_dssp CTTSSTTTSCCEEEESHHHHTTCCCHHHHHHHHHHHHHTTHHHHTCCEEECCSSCBCTTCCBTTBCCBCTTTCTTHHHHH
T ss_pred ccCCccCCCCCEEEEchHhhCcCCCHHHHHHHHHHHHHcCchhhCCCEEEECCCccCCCCCCCCCEEECcccCCcCHHHH
Confidence 5678 999999999999999999999999999999999999999999999999999977888899999999999999999
Q ss_pred HHHHHhcCCeEEEEecCCccccCCCCcccccHHhHHHHHHhcCCcEEEeecCCCC---------C---------------
Q 012852 162 ADYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEKDDAPLFASWGVDYLKYDNCFNL---------G--------------- 217 (455)
Q Consensus 162 ~~~v~~~G~k~Glw~~pg~~~c~~~Pg~~~~~~~~~~~~~~wGidylK~D~~~~~---------~--------------- 217 (455)
+++||++|||||||++++..+|.++||+++|++.++++|++|||||||+|||..+ .
T Consensus 83 ~~~i~~~Glk~Giw~~~g~~~c~~~Pgs~~~~~~d~~~~~~wGvdylK~D~~~~~~~~~~~~~~~~~~~~~~~~~~t~g~ 162 (417)
T 1szn_A 83 AKKVHALGLKLGIYSTAGTATCAGYPASLGYEDVDAADFADWGVDYLKYDNCNVPSDWQDEYVACNPDFVKTGPNGTCTT 162 (417)
T ss_dssp HHHHHHTTCEEEEEEESSSBCTTSCBCCTTCHHHHHHHHHHTTCCEEEEECCCCCGGGSCSSBCCCTTTSCCBGGGBCCT
T ss_pred HHHHHHcCCEEEEEeCCCCchhccCcchHhHHHHHHHHHHHcCCCEEEECCCCCcccccccccccccccccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999311 1
Q ss_pred ----------C-----CccchhHHHHHHHHhcCCCeeEeeCCCCCCChhhhhhhccCeeeecCCCCCChhHHHHHHHhhc
Q 012852 218 ----------I-----EPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDTWASMTSIADIND 282 (455)
Q Consensus 218 ----------~-----~~~~~y~~m~~AL~~~G~~i~~~~c~~g~~~p~~w~~~~~~~~Ris~Di~~~W~~~~~~~~~~~ 282 (455)
. ...++|+.|++||+++||+|+|++|+||...|..|..+++|+||+++|+.+.|+++.++++.+.
T Consensus 163 ~~~p~~~~~~~~~~~~~~~~~Y~~m~~aL~~~~~~i~~~~C~~G~~~~~~w~~~~~n~wR~s~D~~d~w~~~~~i~~~~~ 242 (417)
T 1szn_A 163 ALDPTLAPPGYDWSTSKSAERFGAMRNALAKQSHEIVLSMCIWGQADVFSWGNSTGISWRMSDDISPNWGSVTRILNLNS 242 (417)
T ss_dssp TTCTTBCCTTCCGGGSHHHHHHHHHHHHHHTSSSCCEEEECCTTGGGHHHHGGGTCSEEECSSCCCSSHHHHHHHHHHHH
T ss_pred ccccccccccccccchhHHHHHHHHHHHHHHhCCCEEEEeCCCCCCcchhhHhhcccceeecCCccccHHHHHHHHHHHh
Confidence 0 1257899999999999999999999999877889999999999999999999999989999888
Q ss_pred ccccccCCCCcCCCCccccCCCCCCHHHHHHHHHHHHHHhCceeecCCCCCCCHHHHHhhccHhHHhhccCC-CCCccEE
Q 012852 283 KWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDP-LGVQGRK 361 (455)
Q Consensus 283 ~~~~~~g~g~~nDpDmL~vg~~~lT~~E~rt~~slwa~~gsPL~is~Dl~~l~~~~~~lL~N~e~iainQd~-lG~~~r~ 361 (455)
.++.++++++|||||||++|++++|.+|.|+||++||+++|||++|+||++++++++++|+|+|+||||||+ +|+++++
T Consensus 243 ~~~~~~~~g~~~D~DmL~vg~~~~t~~E~r~~~alwa~~gspL~ig~dl~~l~~~~~~~L~N~eviav~qd~~lg~~~~~ 322 (417)
T 1szn_A 243 FKLNSVDFWGHNDADMLEVGNGNLTAAETRTHFALWAAMKSPLLIGTDLAQLSQNNINLLKNKHLLAFNQDSVYGQPATP 322 (417)
T ss_dssp TCGGGCBTTBEEECCSCCTTCTTCCHHHHHHHHHHHHHTTCCEEECSCGGGCCHHHHHHHTCHHHHHHHTCSSCCSCCEE
T ss_pred hhcccccCccccCCcccccCCCCCCHHHHHHHHHHHHHhCCceEecCCcccCCHHHHHHhcChHHHhhccccccCcceEE
Confidence 899999999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred eee-------cCCCCceeEEEEEcCCCcEEEEEEecCCCceeEEEEceec-CCCCCCceEEEEccCCccccccccceEEE
Q 012852 362 VYV-------SGTDNCLQVWVGPLSGHRLVVALWNRCPKAETITAQWDAL-GLESSTKVSVRDLWQHKQVTGDAVSSFGA 433 (455)
Q Consensus 362 v~~-------~~~~~~~~vw~~~l~dg~~avalfN~~~~~~~iti~l~~L-GL~~~~~~~vrDlW~g~~~~g~~~~~l~~ 433 (455)
+.. .+.+...+||++++++| .||++||+++.++++++++++| ||.++ .|+|||||+|+++ +. +++|++
T Consensus 323 v~w~~~p~~~~~~~~~~~vw~~~l~~g-~~v~l~N~~~~~~~~~~~~~~l~gl~~~-~~~v~DlW~~~~~-g~-~~~~~~ 398 (417)
T 1szn_A 323 YKWGINPDWTFNVTYPAEFWAGPSSKG-HLVLMVNTLDITATKEAKWNEIPGLSAG-HYEVRDVWSDKDL-GC-LSSYKA 398 (417)
T ss_dssp EECSSSCTTCCCSSSCCCEEEECCTTC-EEEEEECCSSSCEEEEECGGGSTTCCSS-EEEEEETTTTEEE-EE-ESSEEE
T ss_pred eecccccccccCCCCCccEEEEEcCCC-cEEEEEECCCCceeEEeCHHHcCCCCCC-ceEEEECcCCCcc-cc-cceEEE
Confidence 861 11123379999999999 9999999999999999999999 99865 8999999999998 66 778999
Q ss_pred EEcCCCEEEEEEEeC
Q 012852 434 QVDAHDCQMYIFTPR 448 (455)
Q Consensus 434 ~L~pH~~~ll~ltp~ 448 (455)
+|+||+|+||||+|+
T Consensus 399 ~v~~h~~~l~~l~~~ 413 (417)
T 1szn_A 399 AVAAHDTAVILVGKK 413 (417)
T ss_dssp EECTTCEEEEEEEEE
T ss_pred EECCCeEEEEEEEcc
Confidence 999999999999985
|
| >1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-87 Score=684.44 Aligned_cols=360 Identities=65% Similarity=1.148 Sum_probs=345.0
Q ss_pred cCCCCCCCceEEechhhhCcCCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCcccCCCCCCCCHHHHHH
Q 012852 84 NNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIKALAD 163 (455)
Q Consensus 84 ~~~~~~~pP~gwnSW~~~~~~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~~~d~~~FP~Gl~~l~~ 163 (455)
.|+++++||||||||++++|++||+.++++||+++++||+++||+||+|||||+...||.+|+|++|++|||+||++|++
T Consensus 2 ~~~~~~~pp~gwnsW~~~~~~~~e~~i~~~ad~~~~~gl~~~G~~~v~iDdgW~~~~rd~~G~~~~~~~~FP~Gl~~l~~ 81 (362)
T 1uas_A 2 ENGLGRTPQMGWNSWNHFYCGINEQIIRETADALVNTGLAKLGYQYVNIDDCWAEYSRDSQGNFVPNRQTFPSGIKALAD 81 (362)
T ss_dssp CSSCCSSCCEEEESHHHHTTCCCHHHHHHHHHHHHHTSHHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTCTTCHHHHHH
T ss_pred CCCCCCCCCEEEECHHHHCCCCCHHHHHHHHHHHHHcCchhcCCcEEEECCCcCCCCCCCCCCeeEChhccCccHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999987789999999999999999999999
Q ss_pred HHHhcCCeEEEEecCCccccC-CCCcccccHHhHHHHHHhcCCcEEEeecCCCCCCCccchhHHHHHHHHhcCCCeeEee
Q 012852 164 YVHGKGLKLGIYSDAGVFTCQ-VRPGSLFHEKDDAPLFASWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSL 242 (455)
Q Consensus 164 ~v~~~G~k~Glw~~pg~~~c~-~~Pg~~~~~~~~~~~~~~wGidylK~D~~~~~~~~~~~~y~~m~~AL~~~G~~i~~~~ 242 (455)
|||++|||||||++||..+|. ++||+++|++.++++|++|||||||+|||+.++..+.++|..|+++|++++++|++++
T Consensus 82 ~ih~~Glk~Giw~~~~~~~~~~~~pg~~~~~~~~~~~~~~wGvdyvK~D~~~~~~~~~~~~y~~~~~al~~~~~~i~~~~ 161 (362)
T 1uas_A 82 YVHAKGLKLGIYSDAGSQTCSNKMPGSLDHEEQDVKTFASWGVDYLKYDNCNDAGRSVMERYTRMSNAMKTYGKNIFFSL 161 (362)
T ss_dssp HHHHTTCEEEEEEESSSBCTTSSSBCCTTCHHHHHHHHHHHTCCEEEEECCCCTTCCHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred HHHHCCCEeEEEeeCCCccccCCCCCchhHHHHHHHHHHHcCCCEEEECccCCCCCCHHHHHHHHHHHHHhhCCCcEEEe
Confidence 999999999999999999998 9999999999999999999999999999998887788999999999999999999999
Q ss_pred CCCCCCChhhhhhhccCeeeecCCCCCChhHHHHHHHhhcccccccCCCCcCCCCccccCCCCCCHHHHHHHHHHHHHHh
Q 012852 243 CEWGVDDPALWAGKVGNSWRTTGDINDTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALMK 322 (455)
Q Consensus 243 c~~g~~~p~~w~~~~~~~~Ris~Di~~~W~~~~~~~~~~~~~~~~~g~g~~nDpDmL~vg~~~lT~~E~rt~~slwa~~g 322 (455)
|+|+...|..|...++|+||+++|+.+.|+++..+++.+..+..+++|++||||||+.+|+.++|.+|.|+||++||+++
T Consensus 162 c~~g~~~p~~w~~~~~n~~R~~~D~~~~w~~~~~~~~~~~~~~~~~~pg~~~D~Dml~vg~~~~t~~e~~~~~al~~i~~ 241 (362)
T 1uas_A 162 CEWGKENPATWAGRMGNSWRTTGDIADNWGSMTSRADENDQWAAYAGPGGWNDPDMLEVGNGGMSEAEYRSHFSIWALAK 241 (362)
T ss_dssp ESTTTTCGGGTGGGTCSEEECSSCCCSSHHHHHHHHHHHHTTGGGCBTTBEEECCCCCTTSSSSCHHHHHHHHHHHHHTT
T ss_pred cCCCCCChHHHHhhheeEEEecCCCCcCchhHHHHHHHHHHHHHhcCCCcccCcchheeCCCCCCHHHHHHHHHHHHHhC
Confidence 99998889999999999999999999999999999888888888999999999999999999999999999999999999
Q ss_pred CceeecCCCCCCCHHHHHhhccHhHHhhccCCCCCccEEeeecCCCCceeEEEEEcCCCcEEEEEEecCCCceeEEEEce
Q 012852 323 APLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVYVSGTDNCLQVWVGPLSGHRLVVALWNRCPKAETITAQWD 402 (455)
Q Consensus 323 sPL~is~Dl~~l~~~~~~lL~N~e~iainQd~lG~~~r~v~~~~~~~~~~vw~~~l~dg~~avalfN~~~~~~~iti~l~ 402 (455)
|||++|+|+++++++.+++|+|+|+|++|||++|++++++...++ .+||+++++++++||++||+++++++++++|+
T Consensus 242 spL~~~~Dl~~~~~~~~~~l~n~evia~~qd~lg~~~~~v~~~~~---~~v~a~~~~~~~~~v~~~N~~~~~~~~~~~l~ 318 (362)
T 1uas_A 242 APLLIGCDVRSMSQQTKNILSNSEVIAVNQDSLGVQGKKVQSDNG---LEVWAGPLSNNRKAVVLWNRQSYQATITAHWS 318 (362)
T ss_dssp CCEEECSCTTSCCHHHHHHHTCHHHHHHHTCTTCCCCEEEEEETT---EEEEEEECSTTCEEEEEEECSSSCEEEEEEGG
T ss_pred CceEecCChhhCCHHHHHhhcCHHHhhhcccccCccceEEEecCC---eEEEEEEcCCCCEEEEEEeCCCCCEEEEEEHH
Confidence 999999999999999999999999999999999999999987765 89999999999999999999999999999999
Q ss_pred ecCCCCCCceEEEEccCCccccccccceEEEEEcCCCEEEEEEEeC
Q 012852 403 ALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQVDAHDCQMYIFTPR 448 (455)
Q Consensus 403 ~LGL~~~~~~~vrDlW~g~~~~g~~~~~l~~~L~pH~~~ll~ltp~ 448 (455)
+||+.+...|+|+|+|+++++ +. +++++++|+||++++++|+|+
T Consensus 319 ~lgl~~~~~~~v~dlw~~~~~-~~-~~~l~~~l~~~g~~~~~l~~~ 362 (362)
T 1uas_A 319 NIGLAGSVAVTARDLWAHSSF-AA-QGQISASVAPHDCKMYVLTPN 362 (362)
T ss_dssp GTTCCTTCEEEEEETTTTEEE-EE-ESEEEEEECTTCEEEEEEEEC
T ss_pred HcCCCCCCcEEEEECcCCCcc-cc-cceEEEEECCCeEEEEEEEeC
Confidence 999987678999999999987 54 788999999999999999974
|
| >4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-86 Score=685.64 Aligned_cols=365 Identities=38% Similarity=0.694 Sum_probs=333.1
Q ss_pred ccCCCCCCCceEEechhhhCcCCC----------HHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCcccCCC
Q 012852 83 LNNGLASTPQMGWNSWNFFACNIS----------ETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTI 152 (455)
Q Consensus 83 ~~~~~~~~pP~gwnSW~~~~~~i~----------e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~~~d~~ 152 (455)
++||++++||||||||++|+|++| |+.++++||+|+++||+++||+||+|||||+. .||.+|+|++|++
T Consensus 1 l~ngla~tPpmGWnSW~~~~~~i~~~~~~~~~~se~~i~~~ad~~~~~gl~~~Gy~yv~iDdgW~~-~rd~~G~~~~d~~ 79 (400)
T 4do4_A 1 LDNGLLQTPPMGWLAWERFRCNINCDEDPKNCISEQLFMEMADRMAQDGWRDMGYTYLNIDDCWIG-GRDASGRLMPDPK 79 (400)
T ss_dssp CCSSCCSSCCEEEESHHHHTTCCCTTTCTTTSSSHHHHHHHHHHHHHSSHHHHTCCEEECCSSCEE-EECTTCCEEECTT
T ss_pred CCCCcCCCCCCcccchHhhccccCccccccccccHHHHHHHHHHHHHCcchhhCCeEEEECCCccc-CCCCCCCEeECcc
Confidence 478999999999999999999986 99999999999999999999999999999997 7999999999999
Q ss_pred CCCCCHHHHHHHHHhcCCeEEEEecCCccccCCCCc-ccccHHhHHHHHHhcCCcEEEeecCCCCCCCccchhHHHHHHH
Q 012852 153 TFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPG-SLFHEKDDAPLFASWGVDYLKYDNCFNLGIEPKKRYPPMRDAL 231 (455)
Q Consensus 153 ~FP~Gl~~l~~~v~~~G~k~Glw~~pg~~~c~~~Pg-~~~~~~~~~~~~~~wGidylK~D~~~~~~~~~~~~y~~m~~AL 231 (455)
|||+||++|++|||++|||||||++|+..+|.++|+ +++|++.++++|++|||||||+|+|..........|..|++++
T Consensus 80 rFP~G~k~ladyih~~Glk~Giy~~~~~~~c~g~~~~~~~~~~~da~~~a~wGvdylK~D~~~~~~~~~~~~~~~~~~~~ 159 (400)
T 4do4_A 80 RFPHGIPFLADYVHSLGLKLGIYADMGNFTCMGYPGTTLDKVVQDAQTFAEWKVDMLKLDGCFSTPEERAQGYPKMAAAL 159 (400)
T ss_dssp TSTTCHHHHHHHHHHTTCEEEEEEEBSSBCTTSCBCBCGGGHHHHHHHHHHTTCCEEEEECTTCCHHHHHHHHHHHHHHH
T ss_pred cCCcccHHHHHHHHHCCceEEEecCCCCcccCCCCchhHhHHHHHHHHHHHhCCceEeeccCcCChhhhhhhhhHHHHHH
Confidence 999999999999999999999999999999998887 8999999999999999999999999877555667889999999
Q ss_pred HhcCCCeeEeeCCCCC------CChhhhhhhccCeeeecCCCCCChhHHHHHHHh----hcccccccCCCCcCCCCcccc
Q 012852 232 NETGCSIFYSLCEWGV------DDPALWAGKVGNSWRTTGDINDTWASMTSIADI----NDKWASYAGPGGWNDPDMLEV 301 (455)
Q Consensus 232 ~~~G~~i~~~~c~~g~------~~p~~w~~~~~~~~Ris~Di~~~W~~~~~~~~~----~~~~~~~~g~g~~nDpDmL~v 301 (455)
+++|++|+++.|.+.. ..+..|..+++|+||+++|+.+.|.++..+.+. +..++.++++++||||||+.+
T Consensus 160 ~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~Di~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~d~d~l~~ 239 (400)
T 4do4_A 160 NATGRPIAFSCSWPAYEGGLPPRVQYSLLADICNLWRNYDDIQDSWWSVLSILNWFVEHQDILQPVAGPGHWNDPDMLLI 239 (400)
T ss_dssp HHTCSCCEEEECGGGGTTSSTTTCCHHHHHHHCSEEECSCCCCSSHHHHHHHHHHHHHTHHHHGGGCBTTBEEECCCCCT
T ss_pred HHhCccceecccccccccccccccchhhcccccccccccCcccCcccchhhHHHHHHHHhHHhhhhcCCCCCCCCccccc
Confidence 9999999999664321 234566778999999999999999998766542 456778899999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCceeecCCCCCCCHHHHHhhccHhHHhhccCCCCCccEEeeecCCCCceeEEEEEcCCC
Q 012852 302 GNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVYVSGTDNCLQVWVGPLSGH 381 (455)
Q Consensus 302 g~~~lT~~E~rt~~slwa~~gsPL~is~Dl~~l~~~~~~lL~N~e~iainQd~lG~~~r~v~~~~~~~~~~vw~~~l~dg 381 (455)
+++++|.+|+|+||++||+++|||++|+|+++++++++++|+|+|+|++|||++|++++++...++ ..+||++++++|
T Consensus 240 ~~~~~t~~e~~t~~slwa~~~spL~~g~Dl~~~~~~~~~lL~N~evia~~qd~~g~~~~~v~~~~~--~~~vw~~~~~~g 317 (400)
T 4do4_A 240 GNFGLSLEQSRAQMALWTVLAAPLLMSTDLRTISAQNMDILQNPLMIKINQDPLGIQGRRIHKEKS--LIEVYMRPLSNK 317 (400)
T ss_dssp TSSSCCHHHHHHHHHHHHHTTCCEEECSCTTTCCHHHHHHHTCHHHHHHHTCTTCCCCEEEEECTT--SEEEEEEECGGG
T ss_pred cCCCCCHHHHHHHHHHHHHHcCCEEecCCcccCCHHHHHHhhChhhhhhcccccccCceEeecCCC--ceEEEEEEcCCC
Confidence 999999999999999999999999999999999999999999999999999999999999987643 379999999999
Q ss_pred cEEEEEEec-CCCceeEEEEceecCCCCCCceEEEEccCCccccccc--cceEEEEEcCCCEEEEEEEeCCcc
Q 012852 382 RLVVALWNR-CPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGDA--VSSFGAQVDAHDCQMYIFTPRTVT 451 (455)
Q Consensus 382 ~~avalfN~-~~~~~~iti~l~~LGL~~~~~~~vrDlW~g~~~~g~~--~~~l~~~L~pH~~~ll~ltp~~~~ 451 (455)
+.||++||+ ++++++++++|++|||.+...|+|||||+|+++ +.+ +++|+++|+||+|+||||||++.+
T Consensus 318 ~~~va~~N~~~~~~~~~~~~l~~lGl~~~~~y~vrDlw~~~~~-g~~~~~~~~~~~v~phg~~l~~ltPvk~~ 389 (400)
T 4do4_A 318 ASALVFFSCRTDMPYRYHSSLGQLNFTGSVIYEAQDVYSGDII-SGLRDETNFTVIINPSGVVMWYLYPIKNL 389 (400)
T ss_dssp CEEEEEEECCSSSCEEEEEEGGGGTCCTTCEEEEEETTTCCEE-EEECTTCEEEEEECTTCEEEEEEEEEC--
T ss_pred CEEEEEEECCCCCcEEEEEEHHHcCCCCCCeEEEEECcCCcee-ccccCCceEEEEECCCeEEEEEEEecCcc
Confidence 999999996 678999999999999999889999999999997 544 467999999999999999998765
|
| >3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-85 Score=683.02 Aligned_cols=357 Identities=27% Similarity=0.503 Sum_probs=326.9
Q ss_pred cccCCCCCCCceEEechhhhCcCCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCC-------------CCCCCCCcc
Q 012852 82 QLNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSP-------------LRDLKGQLV 148 (455)
Q Consensus 82 ~~~~~~~~~pP~gwnSW~~~~~~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~-------------~rd~~G~~~ 148 (455)
++.++++++||||||||++|++++||+.|+++|+.+ ++||+++||+||+||||||.. .+|..|+|+
T Consensus 3 ~~~~~~~~~pp~gwnsW~~~~~~i~e~~i~~~ad~~-~~gl~~~G~~~~~iDDgW~~~~~~~~~y~~~~~~~~d~~G~~~ 81 (433)
T 3cc1_A 3 EVNRLSALTPPMGWNSWDCYGASVTEEEVLGNAEYM-ANHLKKYGWEYIVVDIQWYEPTANSSAYNPFAPLCMDEYGRLL 81 (433)
T ss_dssp CCSCBTTBCCCEEEESHHHHTTCCCHHHHHHHHHHH-HHHTGGGTCCEEEECSCTTCCCTTSTTCCTTSCSCBCTTSCBC
T ss_pred cccCCCCCCCCEEEEChhhhCCcCCHHHHHHHHHHH-HhcchhhCCeEEEECCCcCCCCCcccccccccccccCCCCCEe
Confidence 356789999999999999999999999999999999 889999999999999999985 245679999
Q ss_pred cCCCCCCC-----CHHHHHHHHHhcCCeEEEEecCCc-------------------------cccC----------CCCc
Q 012852 149 PDTITFPS-----GIKALADYVHGKGLKLGIYSDAGV-------------------------FTCQ----------VRPG 188 (455)
Q Consensus 149 ~d~~~FP~-----Gl~~l~~~v~~~G~k~Glw~~pg~-------------------------~~c~----------~~Pg 188 (455)
+|++|||+ ||++|+++||++|||||||++||. .+|. ++|+
T Consensus 82 ~~~~kFP~~~~~~Gl~~l~~~ih~~Glk~Giw~~p~i~~~~v~~~s~~~~~~~~~~di~~~~~~~~~~~~~~~lD~~~p~ 161 (433)
T 3cc1_A 82 PATNRFPSAKNGAGFKPLSDAIHDLGLKFGIHIMRGIPRQAVYENSPVLGSTKTAREIAHTNSICPWNTDMYGVDPTKEG 161 (433)
T ss_dssp CCTTTCGGGTTTTTTHHHHHHHHHTTCEEEEEEESSEEHHHHHHTCBCTTSSCBHHHHEETTCCBTTBTTEEEECTTSTT
T ss_pred ECCccCCCcccCCCHHHHHHHHHHcCCeeEEEeCCCCchhccCCCCccccccceecccccCCcccCCCCCceeecCCCHH
Confidence 99999999 999999999999999999999993 3463 7899
Q ss_pred ccccHHhHHHHHHhcCCcEEEeecCCCCCCC--ccchhHHHHHHHHhcCCCeeEeeCCCCCCCh--hhhhhhccCeeeec
Q 012852 189 SLFHEKDDAPLFASWGVDYLKYDNCFNLGIE--PKKRYPPMRDALNETGCSIFYSLCEWGVDDP--ALWAGKVGNSWRTT 264 (455)
Q Consensus 189 ~~~~~~~~~~~~~~wGidylK~D~~~~~~~~--~~~~y~~m~~AL~~~G~~i~~~~c~~g~~~p--~~w~~~~~~~~Ris 264 (455)
+++|++.++++|++|||||||+|+|...... ..++|.+|++||+++||+|++++|+++ ..+ ..|..+++|+||++
T Consensus 162 ~~~~~~~~~~~l~~~GvDyvK~D~~~~~~~~~~~~~~~~~~~~aL~~~gr~i~~slc~g~-~~~~~~~~~~~~~n~wR~s 240 (433)
T 3cc1_A 162 AQSYYNSLFELYAQWGVDFVKVDDIAASRLYDTHLEEIKMIQRAIQACGRPMVLSLSPGP-APIKYAHHFKTNANMWRIT 240 (433)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEESCSCTTSSCCCHHHHHHHHHHHHHSSSCCEEECCCSB-SSEESCSSSCCTTGGGCCE
T ss_pred HHHHHHHHHHHHHHcCCCEEEeCCcccccCCcccHHHHHHHHHHHHhcCCCEEEEecCCC-CChhhhhhhhhhCcEEEec
Confidence 9999999999999999999999999875432 357899999999999999999999842 223 34567899999999
Q ss_pred CCCCCChhHHHHHHHhhcccccccCCCCcCCCCccccCCC--------------CCCHHHHHHHHHHHHHHhCceeecCC
Q 012852 265 GDINDTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNG--------------GMSYQEYRAHFSIWALMKAPLLIGCD 330 (455)
Q Consensus 265 ~Di~~~W~~~~~~~~~~~~~~~~~g~g~~nDpDmL~vg~~--------------~lT~~E~rt~~slwa~~gsPL~is~D 330 (455)
+|+.+.|+++.++++.+..|+.++++++|||||||++|+. +||.+|+|+||++|||++|||++|+|
T Consensus 241 ~D~~~~w~~~~~~~~~~~~~~~~~~~g~~nD~Dml~vg~~g~~~~~~~~~~~~~~lt~~E~rt~~alwai~~spL~ig~d 320 (433)
T 3cc1_A 241 DDFWDDWSLLYQMFERCEVWEKHIGTGHWPDCGMLPLGHIGIRSVDGPGGDRWTRFTKDEQLTMMNLWAICHSPLMFGGE 320 (433)
T ss_dssp ECCCSCHHHHHHHHHHHHHHHHSCCCSCCCBCCCBCCSEECTTCSSSSSSSEECSSCHHHHHHHHHHHHHTTCCEEECSC
T ss_pred cCccccHHHHHHHHHHHHHHHhhcCCCccCChHHhcccCccccccccccccccCCCCHHHHHHHHHHHHHhcCceEecCc
Confidence 9999999999999998888999999999999999999863 58999999999999999999999999
Q ss_pred CCCCCHHHHHhhccHhHHhhccCCCCCccEEeeecCCCCceeEEEEEcCCCcEEEEEEecCCCceeEEEEceecCCCCCC
Q 012852 331 VRNMTAETFEILSNKEVIAVNQDPLGVQGRKVYVSGTDNCLQVWVGPLSGHRLVVALWNRCPKAETITAQWDALGLESST 410 (455)
Q Consensus 331 l~~l~~~~~~lL~N~e~iainQd~lG~~~r~v~~~~~~~~~~vw~~~l~dg~~avalfN~~~~~~~iti~l~~LGL~~~~ 410 (455)
|++++++++++|+|+|+|||||| |.+++++...++ .+||++++++|+.||+|||+++.+++++++|++|||.+
T Consensus 321 l~~~~~~~~~lL~N~eviavnqd--g~~~~~v~~~~~---~~vw~~~l~~g~~~val~N~~~~~~~~~~~~~~lgl~~-- 393 (433)
T 3cc1_A 321 LRDNDEWTLSLLTNEGILSINQK--SVLNRFVYREED---KVAWAANGRNGEAYVALFNLHDQQKTLQFRLDMVGIME-- 393 (433)
T ss_dssp GGGCCHHHHHHHCCHHHHHHHHH--CEEEEEEEEETT---EEEEEEECSSSCEEEEEEECSSSCEEEEECGGGTTCCS--
T ss_pred cccCCHHHHHHhcChhheeecCC--CcCceeeEecCC---cEEEEEECCCCCEEEEEEeCCCCCEEEEEEHHHcCCCC--
Confidence 99999999999999999999999 778999988765 89999999999999999999999999999999999986
Q ss_pred ceEEEEccCCccccccccc--eEEEEEcCCCEEEEEEEeC
Q 012852 411 KVSVRDLWQHKQVTGDAVS--SFGAQVDAHDCQMYIFTPR 448 (455)
Q Consensus 411 ~~~vrDlW~g~~~~g~~~~--~l~~~L~pH~~~ll~ltp~ 448 (455)
.|+|||||+|+++ +..++ +++++|+||+|+||||+|.
T Consensus 394 ~~~v~Dlw~~~~~-g~~~~~~~~~~~v~~hg~~l~~l~~~ 432 (433)
T 3cc1_A 394 TVQLFNVWDRSFL-QSLAPSESFQIELKPHQSMMLKLSPD 432 (433)
T ss_dssp CEEEEETTTTEEE-EEECTTCCEEEEECTTCEEEEEEEEC
T ss_pred ceEEEECCCCCcc-ccccCCceEEEEECCCcEEEEEEEeC
Confidence 6999999999998 77776 8999999999999999985
|
| >3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-81 Score=682.30 Aligned_cols=359 Identities=39% Similarity=0.661 Sum_probs=334.2
Q ss_pred CCCCCCceEEechhhhCcCCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCcccCCCCCCCCHHHHHHHH
Q 012852 86 GLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIKALADYV 165 (455)
Q Consensus 86 ~~~~~pP~gwnSW~~~~~~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~~~d~~~FP~Gl~~l~~~v 165 (455)
.++++||||||||+++++++||+.++++||+|++.||+++||+||+|||||+...||.+|+|++|++|||+||++|++||
T Consensus 7 ~~~~~~p~gwnsw~~~~~~~~~~~~~~~ad~~~~~g~~~~G~~~~~iDdgW~~~~~d~~g~~~~~~~~fP~gl~~l~~~i 86 (614)
T 3a21_A 7 ITVPSAPMGWASWNSFAAKIDYSVIKKQVDAFVAAGLPAAGYTYINIDEGWWQGTRDSAGNITVDTAEWPGGMSAITAYI 86 (614)
T ss_dssp CCCCCCCEEEESHHHHTTCCCHHHHHHHHHHHHHTTHHHHTCCEEECCTTSCCSCBCTTCCBCCCTTTSTTCHHHHHHHH
T ss_pred ccCCCCceEEEchhhhCccCCHHHHHHHHHHHHHcCHHhhCCEEEEECCCcCCCCcCCCCCEEECccccCCcHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999998789999999999999999999999999
Q ss_pred HhcCCeEEEEecCCccccC--------CCCc--ccccHHhHHHHHHhcCCcEEEeecCCCCCC--CccchhHHHHHHH--
Q 012852 166 HGKGLKLGIYSDAGVFTCQ--------VRPG--SLFHEKDDAPLFASWGVDYLKYDNCFNLGI--EPKKRYPPMRDAL-- 231 (455)
Q Consensus 166 ~~~G~k~Glw~~pg~~~c~--------~~Pg--~~~~~~~~~~~~~~wGidylK~D~~~~~~~--~~~~~y~~m~~AL-- 231 (455)
|++|||||||++||+.+|. ++|| +++|++.++++|++|||||||+|||+.... ...++|.+|++||
T Consensus 87 ~~~Glk~gi~~~~~~~~~~~~~p~~~~~~pg~g~~~~~~~~~~~~~~wGvd~lK~D~~~~~~~~~~~~~~y~~~~~al~~ 166 (614)
T 3a21_A 87 HSKGLKAGIYTDAGKDGCGYYYPTGRPAAPGSGSEGHYDQDMLQFSTWGFDFVKVDWCGGDAEGLDAATTYKSISDAVGR 166 (614)
T ss_dssp HHTTCEEEEEEESSSSCHHHHSCSSSCCCTTCSCTTCHHHHHHHHHHHTCSEEEEECHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred HHCCCeeEEEecCCCccccccCCCCCCCCCchhhHHHHHHHHHHHHHcCCcEEEecccCCcccccchHHHHHHHHHHHHH
Confidence 9999999999999999996 8999 999999999999999999999999976543 5678999999999
Q ss_pred --HhcCCCeeEeeCCCCCCChhhhhhhccCeeeecCCCCCCh-------hHHHHHHHhhcccccccCCCCcCCCCccccC
Q 012852 232 --NETGCSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDTW-------ASMTSIADINDKWASYAGPGGWNDPDMLEVG 302 (455)
Q Consensus 232 --~~~G~~i~~~~c~~g~~~p~~w~~~~~~~~Ris~Di~~~W-------~~~~~~~~~~~~~~~~~g~g~~nDpDmL~vg 302 (455)
+++||+|++++|+||...+..|..+++|+||+++|+. .| ..+..+++.+..+. .+|++|||||||++|
T Consensus 167 ~~~~~gr~i~~s~c~~g~~~~~~~~~~~~~~wR~~~Di~-~~~~~~~~~~~~~~~~~~~~~~~--~~pg~~nD~Dml~~g 243 (614)
T 3a21_A 167 AAATTGRPLTLSICNWGYQNPWNWAAGQAPLWRTSTDII-YYGNQPSMTSLLSNFDQTLHPTA--QHTGYYNDPDMLMVG 243 (614)
T ss_dssp HHHHHSCCCEEEECCTTTTCGGGTCTTTCSEEECSSCSC-CTTSCCCHHHHHHHHHHHCCTTT--CBTTBEEECCSCCTT
T ss_pred HHHhcCCCeEEEecCCccCChhhhhhccCcccccccccc-cccccCchHHHHHHHHHhhhHHh--hCCCcccCCCeeeeC
Confidence 8899999999999998888889889999999999999 55 46666776666555 899999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHhCceeecCCCCCCCHHHHHhhccHhHHhhccCCCCCccEEeeec-CCCCceeEEEEEcC-C
Q 012852 303 NGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVYVS-GTDNCLQVWVGPLS-G 380 (455)
Q Consensus 303 ~~~lT~~E~rt~~slwa~~gsPL~is~Dl~~l~~~~~~lL~N~e~iainQd~lG~~~r~v~~~-~~~~~~~vw~~~l~-d 380 (455)
++++|.+|+|+||++||+++|||++|+|+++++++.+++|+|+|+|++|||++|.+++++... ++ .+||+++++ +
T Consensus 244 ~~~~t~~e~~~~~alwai~~sPL~~g~Dl~~~~~~~~~il~n~e~ia~~qd~~g~~~~~v~~~~~~---~~vw~~~l~~~ 320 (614)
T 3a21_A 244 MDGFTAAQNRTHMNLWAISGAPLLAGNDLTTMTSETAGILKNPEVIAVDQDSRGLQGVKVAEDTTG---LQAYGKVLSGT 320 (614)
T ss_dssp CTTCCHHHHHHHHHHHHHHTCCEEECSCGGGCCHHHHHHHTCHHHHHHHTCTTCCCCEEEEEEETT---EEEEEEECSSS
T ss_pred CCCCCHHHHHHHHHHHHHHcCccEecCCcccCCHHHHHHhcChHHhhhcccccCCCcEEEEecCCC---eEEEEEEcCCC
Confidence 999999999999999999999999999999999999999999999999999999999999875 44 899999998 9
Q ss_pred CcEEEEEEecCCCceeEEEEceecCCCCCCceEEEEccCCccccccccceEEEEEcCCCEEEEEEEeCCccC
Q 012852 381 HRLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQVDAHDCQMYIFTPRTVTR 452 (455)
Q Consensus 381 g~~avalfN~~~~~~~iti~l~~LGL~~~~~~~vrDlW~g~~~~g~~~~~l~~~L~pH~~~ll~ltp~~~~~ 452 (455)
|+++|++||+++++++++++|++||+.+ .+|+|||||+++++ +..++.|+++|+||++++|+|+|.+..+
T Consensus 321 g~~~v~~~N~~~~~~~~~~~l~~lg~~~-~~~~v~dlw~~~~~-~~~~~~~~~~v~~h~~~~~~l~~~g~~~ 390 (614)
T 3a21_A 321 GNRAVVLLNRTSAAHDITVRWSDLGLTN-ASATVRDLWARQNV-GTSATGYTASVPAGGSVMLTVTGGTEAA 390 (614)
T ss_dssp SCEEEEEEECSSSCEEEEEEHHHHTBCS-SCEEEEETTTTEEE-EEESSEEEEEECTTCEEEEEEESCCBCC
T ss_pred CcEEEEEEECCCCCEEEEEEHHHhCCCC-CceEEEECCCCCcc-ccccceEEEEECCCeEEEEEEcCCCCCC
Confidence 9999999999999999999999999986 57999999999887 7778899999999999999999987643
|
| >4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-60 Score=523.50 Aligned_cols=409 Identities=15% Similarity=0.152 Sum_probs=317.5
Q ss_pred eeEeeeeecccceeeeeeeehhhccccccccccccc--ccccceEEEEecc----hhhHHHHHHHhhcccccccccCCCC
Q 012852 15 KMRVGVAMSSMKKKRFVFALVLSLIIDVGFAGRVVV--PLLQSYEKASYSR----GFSRNFGKIFDTSNYGILQLNNGLA 88 (455)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~ 88 (455)
.-++.++.+..+++|+.+ +++|..+.++|.| +|+||+++.+||+ |+|++||+++|.++.+.. ...
T Consensus 256 n~~~~~e~~~~~~~~~~~-----G~~~~~~~~~L~pGesf~tp~~~~~~s~~g~~~~s~~~h~~~r~~~~~~~----~~~ 326 (729)
T 4fnq_A 256 NFLAQVEVDQFHTARVSM-----GINPFDFTWLLQPGESFQTPEVVMVYSDQGLNGMSQTYHELYRTRLARGA----FRD 326 (729)
T ss_dssp CEEEEEEECTTCCEEEEE-----EECCTTCCEEECTTCEEECCCEEEEEESBHHHHHHHHHHHHHHHHTSCST----TTT
T ss_pred CceEEEEEcCCCCEEEEE-----eecCCCCcEEECCCCEEEeeEEEEEEEcCCHHHHHHHHHHHHHHhcCCCc----ccc
Confidence 457788999999999998 8899999999999 9999999999996 788999999999887542 235
Q ss_pred CCCceEEechhhhCcCCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCC---CCCCcccCCCCCCCCHHHHHHHH
Q 012852 89 STPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRD---LKGQLVPDTITFPSGIKALADYV 165 (455)
Q Consensus 89 ~~pP~gwnSW~~~~~~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd---~~G~~~~d~~~FP~Gl~~l~~~v 165 (455)
++|||+||||++++|++||++|+++||++ +++|||+|+||||||..+++ ..|+|++|++|||+|||+|+|+|
T Consensus 327 ~~rPv~~NsW~a~~~d~~e~~i~~~ad~a-----a~lG~e~fviDDGWf~~r~~d~~~lGdW~~d~~kFP~Glk~Lad~v 401 (729)
T 4fnq_A 327 RERPILINNWEATYFDFNEEKLVNIAKTE-----AELGIELFVLDDGWFGKRDDDRRSLGDWIVNRRKLPNGLDGLAKQV 401 (729)
T ss_dssp SCCCCEEECSTTTTTCCCHHHHHHHHHHH-----HHHTCCEEEECSCCBTTCCSTTSCTTCCSBCTTTCTTHHHHHHHHH
T ss_pred cCceeEEcccccccccCCHHHHHHHHHHH-----HhcCccEEEEcceeecCCCCCcccCCcEEEChhhcCccHHHHHHHH
Confidence 78999999999999999999999999999 67999999999999986544 23999999999999999999999
Q ss_pred HhcCCeEEEEecCCccc------------------------------cCCCCcccccH-HhHHHHHHhcCCcEEEeecCC
Q 012852 166 HGKGLKLGIYSDAGVFT------------------------------CQVRPGSLFHE-KDDAPLFASWGVDYLKYDNCF 214 (455)
Q Consensus 166 ~~~G~k~Glw~~pg~~~------------------------------c~~~Pg~~~~~-~~~~~~~~~wGidylK~D~~~ 214 (455)
|++|||||||++|++.+ |.++|++++|+ +.+.++|++|||||||||+|.
T Consensus 402 h~~GmkfGLW~epe~v~~~S~l~~~hPdw~~~~~~~~~~~~r~q~~LD~~~P~v~~y~~~~i~~ll~~~GidYiK~D~n~ 481 (729)
T 4fnq_A 402 NELGMQFGLWVEPEMVSPNSELYRKHPDWCLHVPNRPRSEGRNQLVLDYSREDVCDYIIETISNVLASAPITYVKWDMNR 481 (729)
T ss_dssp HHTTCEEEEEECTTEECSSSHHHHHCGGGBCCCTTSCCCCBTTBEEBCTTSHHHHHHHHHHHHHHHTTTTCCEEEEECCC
T ss_pred HHCCCEEEEEeeccccCCCcHHHHhCchheeccCccCCccCCccccccCCChhHHHHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 99999999999998632 46789999997 566788999999999999997
Q ss_pred CCCC------Cc----------cchhHHHHHHHHhcCCCeeEeeCCCCCCChhhhhhhccCeeeecCCCCCChhHHHHHH
Q 012852 215 NLGI------EP----------KKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDTWASMTSIA 278 (455)
Q Consensus 215 ~~~~------~~----------~~~y~~m~~AL~~~G~~i~~~~c~~g~~~p~~w~~~~~~~~Ris~Di~~~W~~~~~~~ 278 (455)
.... .+ ...|.+|.++|++.+++++++.|+||......+...+.+.+++++|+ +.++++. +.
T Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~l~d~L~~~~P~i~ie~C~~Gg~r~d~~~l~~~~~~w~SD~~-d~~~r~~-i~ 559 (729)
T 4fnq_A 482 HMTEIGSSALPPERQRETAHRYMLGLYRVMDEMTSRFPHILFESCSGGGGRFDPGMLYYMPQTWTSDNT-DAVSRLK-IQ 559 (729)
T ss_dssp CCCSCCCTTSCGGGGGGHHHHHHHHHHHHHHHHHHHCTTCEEEEEBTBBTTCSHHHHTTSSEEECBSCC-CHHHHHH-HH
T ss_pred CCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHHHHCCCcEEEcccCCCCCccchhhhcccceeecCCc-chHHHHH-HH
Confidence 6421 11 22345788889999999999999998755444455777777777654 4444432 22
Q ss_pred HhhcccccccCCCCcCCCCccccCCCCCCHHHHHHHHHHHHHHhCceeecCCCCCCCHHHHHhhccHhHHhhccC--CCC
Q 012852 279 DINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQD--PLG 356 (455)
Q Consensus 279 ~~~~~~~~~~g~g~~nDpDmL~vg~~~lT~~E~rt~~slwa~~gsPL~is~Dl~~l~~~~~~lL~N~e~iainQd--~lG 356 (455)
..+. +......+.++++|+...+.++++..|.|++++|| +||+++.|+++++++++++++ ++|+++|+ ++.
T Consensus 560 ~g~s-~~~p~~~~g~hv~~~~~~~~gr~t~~e~r~~~al~----g~l~~~~dl~~ls~e~~~~lk--~~Ia~yK~~r~li 632 (729)
T 4fnq_A 560 YGTS-LVYPISAMGAHVSAVPNHQVGRVASLKARGHVAMS----GNFGYELDITKLTETEKQMIK--QQVAFYKDVRRLV 632 (729)
T ss_dssp HHHT-TTSCGGGEEEEEECSSCSSSCCCCCHHHHHHHHTT----SEEEEESCGGGCCHHHHHHHH--HHHHHHHHHHHHH
T ss_pred hchh-cccCchhcccCccCCcccCCcCcchHHHHHHHHHH----hhcccccCcccCCHHHHHHHH--HHHHHHHHHHHHH
Confidence 2222 22233445677888877777789999999887765 899999999999999999995 68888765 344
Q ss_pred CccEEeeec-CCCCceeEEEEEcCCCcEEE-EEEecCCCceeEEEEceecCCCCCCceEEEEc--cCCccccccccceEE
Q 012852 357 VQGRKVYVS-GTDNCLQVWVGPLSGHRLVV-ALWNRCPKAETITAQWDALGLESSTKVSVRDL--WQHKQVTGDAVSSFG 432 (455)
Q Consensus 357 ~~~r~v~~~-~~~~~~~vw~~~l~dg~~av-alfN~~~~~~~iti~l~~LGL~~~~~~~vrDl--W~g~~~~g~~~~~l~ 432 (455)
+.++.+... ..+....+|....+|++.+| ++||....+......+.-.||+++..|+|+|+ |+|+.+ -.. | +.
T Consensus 633 ~~G~~~rl~~p~~~~~~~~~~v~~d~~~avv~~~~~~~~~~~~~~~l~l~GLdp~~~Y~v~~~~~~sG~~L-m~~-G-l~ 709 (729)
T 4fnq_A 633 QFGTFYRLLSPFEGNEAAWMFVSADRSEALVAYFRVLAEANAPLSYLRLKGLDPNQDYEIEGLGVYGGDEL-MYA-G-VA 709 (729)
T ss_dssp HHSEEEEEECTTSSSEEEEEEECTTSSEEEEEEEEEEECTTCCCCEECCCSSCTTSEEEETTTEEEEHHHH-HHT-C-EE
T ss_pred hCceEEecCCCCCCCeEEEEEECCCCCEEEEEEEecCCCCCCccceeeCCCCCCCCCEEEeeCceEcHHHH-HhC-C-cc
Confidence 444443322 11234679999999987665 45776666555555566569999999999875 888876 221 2 44
Q ss_pred EEE--cCCCEEEEEEEeCC
Q 012852 433 AQV--DAHDCQMYIFTPRT 449 (455)
Q Consensus 433 ~~L--~pH~~~ll~ltp~~ 449 (455)
+.+ +.+.++||+|+.+.
T Consensus 710 ~p~~~~d~~s~~~~l~~v~ 728 (729)
T 4fnq_A 710 LPYRSGDFISMMWRLKAVQ 728 (729)
T ss_dssp CCCCCEEEEEEEEEEEEC-
T ss_pred CCCCCCCceeEEEEEEEec
Confidence 433 34689999998764
|
| >1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-56 Score=481.72 Aligned_cols=331 Identities=14% Similarity=0.165 Sum_probs=259.6
Q ss_pred cceEEEEecc--hhhHHHHHHHhhcccccccccCCCCCCCceEEechhhhCcCCCHHHHHHHHHHHHHcCCcccCceEEE
Q 012852 54 QSYEKASYSR--GFSRNFGKIFDTSNYGILQLNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVN 131 (455)
Q Consensus 54 ~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~pP~gwnSW~~~~~~i~e~~i~~~ad~~~~~gl~~~G~~~~~ 131 (455)
.|+++.+..+ .+.+++|++++.++ ++. .+++||||||||+++++++||+.|++.|+.+ +++|+++|+
T Consensus 162 ~~~~~~~g~~~~~v~~~y~~l~g~~~-~p~-----w~~~~P~gwnsW~~~~~~~te~~v~~~ad~~-----~~~G~~~~~ 230 (564)
T 1zy9_A 162 EPLVVLEDPNTPLLLEKYAELVGMEN-NAR-----VPKHTPTGWCSWYHYFLDLTWEETLKNLKLA-----KNFPFEVFQ 230 (564)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHHHT-TCC-----CCSSCCEEEESHHHHGGGCCHHHHHHHHHHG-----GGTTCSEEE
T ss_pred ceEEEEeCCCHHHHHHHHHHHhcccC-CCc-----cccCCceEEcchhccCcCCCHHHHHHHHHHH-----HhcCCcEEE
Confidence 6676554332 78899999999877 432 4788999999999999999999999999999 579999999
Q ss_pred ecCCcCCCCCCCCCCcccCCCCCCCCHHHHHHHHHhcCCeEEEEecCCccc-----------------------------
Q 012852 132 IDDCWSSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFT----------------------------- 182 (455)
Q Consensus 132 iDDGW~~~~rd~~G~~~~d~~~FP~Gl~~l~~~v~~~G~k~Glw~~pg~~~----------------------------- 182 (455)
|||||+. ..|+|++|++|||+ |++|+++||++|||||||++|++..
T Consensus 231 IDdgW~~----~~Gdw~~d~~kFP~-lk~lvd~lh~~Glk~Giw~~P~~v~~~S~ly~~~pdw~v~~~G~~~~~~~~W~~ 305 (564)
T 1zy9_A 231 IDDAYEK----DIGDWLVTRGDFPS-VEEMAKVIAENGFIPGIWTAPFSVSETSDVFNEHPDWVVKENGEPKMAYRNWNK 305 (564)
T ss_dssp ECTTSEE----ETTEEEEECTTCCC-HHHHHHHHHHTTCEEEEEECTTEEETTCHHHHHCGGGBCEETTEECEEEEETTE
T ss_pred ECccccc----ccCCcccCcccCCC-HHHHHHHHHHCCCEEEEEeCCCccCCCChhHHhCCCeEEecCCeeeeeecccCC
Confidence 9999997 47899999999999 9999999999999999999997311
Q ss_pred -----cCCCCcccccHHhHHHHHHhcCCcEEEeecCCCCCCC--------ccchhHHHHHHHHhc-CCCeeEeeCCCCCC
Q 012852 183 -----CQVRPGSLFHEKDDAPLFASWGVDYLKYDNCFNLGIE--------PKKRYPPMRDALNET-GCSIFYSLCEWGVD 248 (455)
Q Consensus 183 -----c~~~Pg~~~~~~~~~~~~~~wGidylK~D~~~~~~~~--------~~~~y~~m~~AL~~~-G~~i~~~~c~~g~~ 248 (455)
..++|++++|+...++.+++|||||||+|+|...... ..++|..+.++|.+. +++++++.|+||.
T Consensus 306 ~~~~lD~t~P~a~~~~~~~~~~~~~~GVD~iK~D~~~~~~~~g~~~~~~~~~~~y~~~l~~l~~~~pr~i~i~~C~~g~- 384 (564)
T 1zy9_A 306 KIYALDLSKDEVLNWLFDLFSSLRKMGYRYFKIDFLFAGAVPGERKKNITPIQAFRKGIETIRKAVGEDSFILGCGSPL- 384 (564)
T ss_dssp EEEEBCTTCHHHHHHHHHHHHHHHHTTCCEEEECCGGGGGCSSBCSSSCCHHHHHHHHHHHHHHHHCTTSEEEECSCBS-
T ss_pred ceeecCCCCHHHHHHHHHHHHHHHhcCCCEEEEcCCCCccccccccccchHHHHHHHHHHHHHhhCCCCeEEEecCCcc-
Confidence 1468999999999999999999999999999764321 356777777777654 5589999999873
Q ss_pred ChhhhhhhccCeeeecCCCCCChhHHHH----------HHHhhcccccccCCCCcCCCCccccCC--CCCCHHHHHHHHH
Q 012852 249 DPALWAGKVGNSWRTTGDINDTWASMTS----------IADINDKWASYAGPGGWNDPDMLEVGN--GGMSYQEYRAHFS 316 (455)
Q Consensus 249 ~p~~w~~~~~~~~Ris~Di~~~W~~~~~----------~~~~~~~~~~~~g~g~~nDpDmL~vg~--~~lT~~E~rt~~s 316 (455)
.| ..+++|+||+++|+.+.|++... +.+....++...++ +|||||||++|+ .++|.+|+|+|++
T Consensus 385 ~~---s~~~~n~~Ris~Di~~~W~s~~~~~~~p~~~~~~~n~~~~~~~~~~~-~~nDPDml~vg~~~~~lT~~E~r~h~a 460 (564)
T 1zy9_A 385 LP---AVGCVDGMRIGPDTAPFWGEHIEDNGAPAARWALRNAITRYFMHDRF-WLNDPDCLILREEKTDLTQKEKELYSY 460 (564)
T ss_dssp GG---GTTTCSEEECSSCCCSSCCTTSCSSSSSCHHHHHHHHHHTGGGBTTT-BEEECCCBCCCSSSCCCCHHHHHHHHH
T ss_pred cc---cccccceEEEcCCccccccccccccccHHHHHHHHHHHHHHhhccCC-cccCCCEeEecCCCCCCCHHHHHHHHH
Confidence 22 35889999999999999987431 12233444545555 799999999998 6899999999999
Q ss_pred HHHHHhCceeecCCCCCCCHHHHHhhccHhHHhhccCCCCCccEEeeecCCCCceeEE---EEEcCCCcEEEEEEecCCC
Q 012852 317 IWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDPLGVQGRKVYVSGTDNCLQVW---VGPLSGHRLVVALWNRCPK 393 (455)
Q Consensus 317 lwa~~gsPL~is~Dl~~l~~~~~~lL~N~e~iainQd~lG~~~r~v~~~~~~~~~~vw---~~~l~dg~~avalfN~~~~ 393 (455)
+|||+|+||++|+|+++++++++++|+ ++||+|++ +.+ +. +...+.. || .+++++| .||+|||++++
T Consensus 461 lwAi~g~PLiigddl~~l~~~~l~lL~--evIavng~----~~~-~~-~~~~~~~-vw~v~a~~~~~g-~aValfN~~~~ 530 (564)
T 1zy9_A 461 TCGVLDNMIIESDDLSLVRDHGKKVLK--ETLELLGG----RPR-VQ-NIMSEDL-RYEIVSSGTLSG-NVKIVVDLNSR 530 (564)
T ss_dssp HHHHTTCCEEECSCGGGCCHHHHHHHH--HHHTTCSS----EEE-ET-TTTCSSS-EEEEEEEEETTE-EEEEEEETTTT
T ss_pred HHHHHcCCeeeccCcccCCHHHHHHHH--HHHHHcCC----cce-ee-cCCCCce-EEEEecCCCCCC-EEEEEEECCCC
Confidence 999999999999999999999999998 89999943 332 22 2222212 77 7888888 99999999999
Q ss_pred ceeEEEEceecCCCCCCceEEEEc
Q 012852 394 AETITAQWDALGLESSTKVSVRDL 417 (455)
Q Consensus 394 ~~~iti~l~~LGL~~~~~~~vrDl 417 (455)
++++++++++|||.. ++++||.
T Consensus 531 ~~~~~~~~~~lgl~~--~~~~~~~ 552 (564)
T 1zy9_A 531 EYHLEKEGKSSLKKR--VVKREDG 552 (564)
T ss_dssp EEEEECC-----------------
T ss_pred CEEEEecHHHcCCcc--eeEeccC
Confidence 999999999999986 6777874
|
| >2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-54 Score=471.98 Aligned_cols=405 Identities=18% Similarity=0.205 Sum_probs=320.8
Q ss_pred ceeEeeeeecccceeeeeeeehhhccccccccccccc--ccccceEEEEecc----hhhHHHHHHHhhcccccccccCCC
Q 012852 14 EKMRVGVAMSSMKKKRFVFALVLSLIIDVGFAGRVVV--PLLQSYEKASYSR----GFSRNFGKIFDTSNYGILQLNNGL 87 (455)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~ 87 (455)
...+..++.+..+++|+.+ ++++..+.+.|.| +++|||++..||+ +++++||+++|.++.+.. ..
T Consensus 259 G~~~~~~~~~~~~~~~v~~-----g~~~~~~~~~L~pGe~~~tP~~~~~~s~~g~~~~s~~~~~l~~~~~~~~~----~~ 329 (732)
T 2xn2_A 259 GNHKFEVERDQFGQIHVNT-----GINDYNFKWKLNPNEEFQTPEVLMVYSDQGLNKMSQAFHSLIHERIMRSK----FK 329 (732)
T ss_dssp SCEEEEEEECTTSCEEEEE-----EECCTTCCEEECTTCEEECCCEEEEEESBCHHHHHHHHHHHHHHHTCCCT----TT
T ss_pred CcEEEEEEEcCCCeEEEEE-----EEcCCCCceEecCCCeEEeeEEEEEEecCCHHHHHHHHHHHHHHhcCCCc----cc
Confidence 4567778888899999998 8888889999999 9999999999994 778999999998865421 13
Q ss_pred CCCCceEEechhhhCcCCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCC----CCCcccCCCCCCCCHHHHHH
Q 012852 88 ASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDL----KGQLVPDTITFPSGIKALAD 163 (455)
Q Consensus 88 ~~~pP~gwnSW~~~~~~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~----~G~~~~d~~~FP~Gl~~l~~ 163 (455)
.++|||+||||+++++++||+.|++.||.+ +++|+++|+||||||.. |+. .|+|.+|++|||+||++|++
T Consensus 330 ~~~~p~~wnsW~~~~~~~~ee~v~~~ad~~-----~~~G~~~~viDDGW~~~-r~~~~~~~Gd~~~d~~kFP~Glk~lv~ 403 (732)
T 2xn2_A 330 DQIRPVLVNNWEATYFDFNEDKLKTIVDKA-----KKLGLEMFVLDDGWFGH-RDDDNSSLGDWKVYKKKFPNGLGHFAD 403 (732)
T ss_dssp TSCCCCEEECHHHHTTCCCHHHHHHHHHHH-----HHTTCCEEEECSSSBTT-CSSTTSCTTCCSBCTTTCTTCHHHHHH
T ss_pred cCCCCeEEEchhhhccCCCHHHHHHHHHHH-----HHcCCcEEEEcCccccc-CCCCccccCceeeCchhcCccHHHHHH
Confidence 578999999999999999999999999999 67899999999999984 443 39999999999999999999
Q ss_pred HHHhcCCeEEEEecCCcc---------------cc---------------CCCCcccccH-HhHHHHHHhcCCcEEEeec
Q 012852 164 YVHGKGLKLGIYSDAGVF---------------TC---------------QVRPGSLFHE-KDDAPLFASWGVDYLKYDN 212 (455)
Q Consensus 164 ~v~~~G~k~Glw~~pg~~---------------~c---------------~~~Pg~~~~~-~~~~~~~~~wGidylK~D~ 212 (455)
++|++|||||||++|++. .| .++|++++|+ +.+.+++++|||||||+|+
T Consensus 404 ~ih~~Glk~GlW~~P~~v~~~S~l~~~hpdw~~~~~g~~~~~~~~~~~LD~t~Pev~~~i~~~l~~~~~~~GVD~~K~D~ 483 (732)
T 2xn2_A 404 YVHEQGLKFGLWFEPEMISYESNLYKEHPDYLXHVPGRKPCPSRNQYVLELGRKEVRDNIFEQMVKILDSKKIDYIKWDM 483 (732)
T ss_dssp HHHHTTCEEEEEECTTEECSSSHHHHHCGGGBCCCTTSCCCCBTTBEEBCTTSHHHHHHHHHHHHHHHTTSCCCEEEECC
T ss_pred HHHHcCCEEEEEeCccccCCCCHHHHhCchheecCCCCCCccCCceEEEcCCCHHHHHHHHHHHHHHHHHcCCCEEEECC
Confidence 999999999999999841 11 4577888886 4567789999999999999
Q ss_pred CCCC------CCCc------cchhH----HHHHHHHhcCCCeeEeeCCCCC--CChhhhhhhccCeeeecCCCCCChhHH
Q 012852 213 CFNL------GIEP------KKRYP----PMRDALNETGCSIFYSLCEWGV--DDPALWAGKVGNSWRTTGDINDTWASM 274 (455)
Q Consensus 213 ~~~~------~~~~------~~~y~----~m~~AL~~~G~~i~~~~c~~g~--~~p~~w~~~~~~~~Ris~Di~~~W~~~ 274 (455)
|... ...+ ..+|. .+.++|++.+++++|+.|.||. .++... ....+.|+ .|+.+.|+++
T Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~y~~~~y~~~~~l~~~~p~i~~~~C~~Gg~r~d~g~l-~~~~~~W~--sD~~d~~~r~ 560 (732)
T 2xn2_A 484 NRSLSDIYESDLPADQQGEAYHRYVLGYYDLLNKLVTRYPDILFEGCSGGGGRFDVGQA-YYTPQIWA--SDNTDAIERL 560 (732)
T ss_dssp CCCCCSCCCTTSCGGGGGGHHHHHHHHHHHHHHHHHHHCTTSEEEECBTBBTTCSHHHH-TTCSEEEC--BSCCCHHHHH
T ss_pred CccccccCCCCCCccchhhHHHHHHHHHHHHHHHHHHhCCCcEEEEecCcccccCchhh-cccceEEC--CCCcCHHHHH
Confidence 9642 1111 13443 3567889999999999999974 333322 23456784 4889999876
Q ss_pred HHHHHhhcccccccCCCCcCCCCccccCCC---CCCHHHHHHHHHHHHHHhCceeecCCCCCCCHHHHHhhccHhHHhhc
Q 012852 275 TSIADINDKWASYAGPGGWNDPDMLEVGNG---GMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVN 351 (455)
Q Consensus 275 ~~~~~~~~~~~~~~g~g~~nDpDmL~vg~~---~lT~~E~rt~~slwa~~gsPL~is~Dl~~l~~~~~~lL~N~e~iain 351 (455)
. +... ..+..|..+++++++.+++. ++|+.|.|+++++|+ ||+++.|+++++++++++|+|...|+.+
T Consensus 561 ~-i~~g----~s~~~P~~~~~~~~~~~pn~~~~r~t~~e~R~~~al~~----~l~~~~dl~~l~~e~~~~l~~~~~l~k~ 631 (732)
T 2xn2_A 561 K-IQYG----TSLVYPQSMMTSHVSVSPNEQNGRITPFNTRGAVAMWG----DLGYELDLTKMSDEESDQVVKQVTEYKK 631 (732)
T ss_dssp H-HHHH----HTTTSCGGGEEEEEECSSCTTTCCCCCHHHHHHHHTTS----EEEEESCGGGCCHHHHHHHHHHHHHHHH
T ss_pred H-Hhcc----hhhcCCcccCCCCEEeeCCCCCCCCCHHHHHHHHHHHH----HhhcCCChhhCCHHHHHHHHHHHHHHHh
Confidence 3 3221 22456777888888888764 789999999998886 8999999999999999999999999999
Q ss_pred cCCCCCccEEeeecCCCCceeEEEEEcCCCcEEEEEE-ecCCCceeEEEEceecCCCCCCceEEEE---ccCCccccccc
Q 012852 352 QDPLGVQGRKVYVSGTDNCLQVWVGPLSGHRLVVALW-NRCPKAETITAQWDALGLESSTKVSVRD---LWQHKQVTGDA 427 (455)
Q Consensus 352 Qd~lG~~~r~v~~~~~~~~~~vw~~~l~dg~~avalf-N~~~~~~~iti~l~~LGL~~~~~~~vrD---lW~g~~~~g~~ 427 (455)
|++++++++.+.....+...++|...++|++.+|+++ |....+...++++...||++...|.|+| +++|..+ .
T Consensus 632 ~r~li~~g~~~rl~~~~~~~~~w~~~~~d~~~avv~~~~~~~~~~~~~~~l~l~GL~~~~~Y~v~~~~~~~sG~~L---m 708 (732)
T 2xn2_A 632 IREVTQFGTLYRLKASASNQCAWMMVDSNKNEAVVTVVNVMAHAQPYCTKTKLAGLDPDKRYKNLETDEVFGGDEL---M 708 (732)
T ss_dssp HHHHHHHSEEEEEECGGGTEEEEEEECTTSCEEEEEEEECSCCSSCCCCEECCCSCCTTSEEEETTTCCEEEHHHH---H
T ss_pred hhHHHhcCcEEEecCCCCCEeEEEEECCCCCEEEEEEEEccCCCCcceeeEEccCCCcCCeEEecCCCeEEcHHHH---H
Confidence 9999888876543321234899999999988877665 5566666667777888999999999987 6666654 2
Q ss_pred cceEEE-EE-cCCCEEEEEEEeC
Q 012852 428 VSSFGA-QV-DAHDCQMYIFTPR 448 (455)
Q Consensus 428 ~~~l~~-~L-~pH~~~ll~ltp~ 448 (455)
+.-+.+ .+ .+..+++++|++.
T Consensus 709 ~~Gl~~p~~~~~~~s~~~~l~~~ 731 (732)
T 2xn2_A 709 HLGFYDPIERGDFKAKMYHFKAI 731 (732)
T ss_dssp HTCEECCCCSSSSEEEEEEEEEC
T ss_pred hCCccCCCCCCCcEEEEEEEEEe
Confidence 222444 34 7889999999864
|
| >2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-46 Score=408.79 Aligned_cols=403 Identities=15% Similarity=0.168 Sum_probs=290.4
Q ss_pred ceeEeeeeecccceeeeeeeehhhccccccccccccc--ccccceEEEEecc----hhhHHHHHHHhhcccccccccCCC
Q 012852 14 EKMRVGVAMSSMKKKRFVFALVLSLIIDVGFAGRVVV--PLLQSYEKASYSR----GFSRNFGKIFDTSNYGILQLNNGL 87 (455)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~ 87 (455)
...++.++.+..+++|+.+ ++++..+.++|.| +++||+++.+||. +++++||+++|.++.+.. ..
T Consensus 255 G~~~~~~~~~~~~~~~v~~-----g~~~~~~~~~L~pGe~~~tp~~~~~~~~~gl~~~~~~~~~~~r~~~~~~~----~~ 325 (720)
T 2yfo_A 255 GNFSCEAEKDQFNQTRLLL-----GLNEELFSYPLASGETFTVPEVILSYSAEGLSALSQQYHNCIRNHVCRSK----YV 325 (720)
T ss_dssp SCEEEEEEECTTSCEEEEE-----ESCSTTCCEEECTTCEEEEEEEEEEEESBCHHHHHHHHHHHHHHHTCCCG----GG
T ss_pred CcEEEEEEEcCCCeEEEEE-----eecCcCcceEeCCCCeEEeeEEEEEEecCCHHHHHHHHHHHHHhhccccc----cc
Confidence 4567778888899999998 8888889999999 9999999999984 777999999998876421 12
Q ss_pred CCCCceEEechhhhCcCCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCC---CCCCcccCCCCCCCCHHHHHHH
Q 012852 88 ASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRD---LKGQLVPDTITFPSGIKALADY 164 (455)
Q Consensus 88 ~~~pP~gwnSW~~~~~~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd---~~G~~~~d~~~FP~Gl~~l~~~ 164 (455)
.++|||+||||++++|++||+.|++.|+.+ +++|+++|+||||||..+++ ..|+|.+|++|||+||++|+++
T Consensus 326 ~~~~p~~~nsW~~~~~~~~e~~i~~~ad~~-----~~~G~~~~viDDgW~~~r~~~~~~~Gdw~~d~~kFP~Glk~lvd~ 400 (720)
T 2yfo_A 326 HMQRPVLINSWEAAYFDFTGDTIVDLAKEA-----ASLGIDMVVMDDGWFGKRNDDNSSLGDWQVNETKLGGSLAELITR 400 (720)
T ss_dssp GSCCCCEEEHHHHHTTCCCHHHHHHHHHHH-----HHHTCCEEEECSSSBTTCSSTTSCTTCCSBCHHHHTSCHHHHHHH
T ss_pred CCCCCeEEEchHHhCcCCCHHHHHHHHHHH-----HHcCCcEEEECcccccCCCcccccCCCCeeChhhcCccHHHHHHH
Confidence 478999999999999999999999999998 67899999999999985432 3499999999999999999999
Q ss_pred HHhcCCeEEEEecCCcc------------------------------ccCCCCcccccHHhHH-HHHHhcCCcEEEeecC
Q 012852 165 VHGKGLKLGIYSDAGVF------------------------------TCQVRPGSLFHEKDDA-PLFASWGVDYLKYDNC 213 (455)
Q Consensus 165 v~~~G~k~Glw~~pg~~------------------------------~c~~~Pg~~~~~~~~~-~~~~~wGidylK~D~~ 213 (455)
||++|||||||++|++. .+.++|++++|+...+ +++++|||||||+|++
T Consensus 401 ih~~Glk~GlW~~P~~v~~~S~l~~~hpdw~~~~~~~~~~~~~~~~~LD~t~Pea~~~~~~~l~~l~~~~GIDy~K~D~n 480 (720)
T 2yfo_A 401 VHEQGMKFGIWIEPEMINEDSDLYRAHPDWAIRIQGKKPVRSRNQLLLDFSRKEVRDCVFDQICVVLDQGKIDYVKWDMN 480 (720)
T ss_dssp HHHTTCEEEEEECTTEECSSSHHHHHCGGGBCCCTTSCCCCBTTBEEBCTTSHHHHHHHHHHHHHHHTTSCCCEEEECCC
T ss_pred HHHCCCEEEEEecccccCCCCHHHHhCcceEEECCCcCcccCCceEEECCCCHHHHHHHHHHHHHHHHHcCCCEEEECCC
Confidence 99999999999999741 1256788999986665 6688999999999997
Q ss_pred CCCCC--Cc--cchhH----HHHHHHHhcCCCeeEeeCCCCC--CChhhhhhhccCeeeecCCCCCChhHHHHHHHhhcc
Q 012852 214 FNLGI--EP--KKRYP----PMRDALNETGCSIFYSLCEWGV--DDPALWAGKVGNSWRTTGDINDTWASMTSIADINDK 283 (455)
Q Consensus 214 ~~~~~--~~--~~~y~----~m~~AL~~~G~~i~~~~c~~g~--~~p~~w~~~~~~~~Ris~Di~~~W~~~~~~~~~~~~ 283 (455)
..... .+ ..+|. .+.++|++.+++++|+.|.+|. .++... ....+.| ++ |..+.|+++. +......
T Consensus 481 ~~~~~~~~~~~~~~y~~~~y~l~~~l~~~~p~v~~e~C~~GG~r~D~g~l-~~~~~~W-~s-D~~da~er~~-iq~g~s~ 556 (720)
T 2yfo_A 481 RSMADVYAGNLSYDYVLGVYDFMERLCSRYPDLLLEGCSGGGGRFDAGML-YYSPQIW-CS-DNTDAINRTR-IQYGTSF 556 (720)
T ss_dssp SCCCSCCSTTHHHHHHHHHHHHHHHHHHHSTTCEEEECBTBBTTCSHHHH-TTCSEEE-CB-SCCCHHHHHH-HHHHHTT
T ss_pred CCccccCCccHHHHHHHHHHHHHHHHHHhCCCcEEEeccCCCCccccccc-eecccEe-cC-CCCCHHHHHh-hhccccc
Confidence 54321 11 23443 5677888899999999999864 333322 1234566 34 5677787654 2222111
Q ss_pred cccccCCC-Cc-CCCCccccCCCCCCHHHHHHHHHHHHHHhCceeecCCCCCCCHHHHHhhccHhHHhhcc--CCCCCcc
Q 012852 284 WASYAGPG-GW-NDPDMLEVGNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQ--DPLGVQG 359 (455)
Q Consensus 284 ~~~~~g~g-~~-nDpDmL~vg~~~lT~~E~rt~~slwa~~gsPL~is~Dl~~l~~~~~~lL~N~e~iainQ--d~lG~~~ 359 (455)
..+....+ +. .-|++ . .++.++.+.|.+++++ ++|.++.|++++++++++++++ .|++.+ .++.+.+
T Consensus 557 ~yP~~~~~~hv~~~P~h-~--~~r~~~l~~R~~~a~~----g~l~~~~dl~~ls~e~~~~l~~--~i~~~k~~r~li~~G 627 (720)
T 2yfo_A 557 FYPVSAMGAHVSAVPNH-Q--TGRVTSFHTRGVTAMA----GTFGYELNPALLSDEEKQQIRE--QIKTYKKYETLINEG 627 (720)
T ss_dssp TSCGGGEECCEECSSCT-T--TCCCCCHHHHHHHHTT----TTCCEESCGGGSCHHHHHHHHH--HHHHHHHHHHHHHHS
T ss_pred cCCHhHhccceeccccc-c--ccCcChHHHHHHHHHh----ccCccccChhhCCHHHHHHHHH--HHHHHHHHhHHHhcC
Confidence 11111111 11 12333 1 2356788888876543 4888999999999999999984 555443 1222334
Q ss_pred EEeeecCC-CCceeEEEEEcCCCcE-EEEEEecCCCceeEEEEceecCCCCCCceEEE----EccCCccccccccceEEE
Q 012852 360 RKVYVSGT-DNCLQVWVGPLSGHRL-VVALWNRCPKAETITAQWDALGLESSTKVSVR----DLWQHKQVTGDAVSSFGA 433 (455)
Q Consensus 360 r~v~~~~~-~~~~~vw~~~l~dg~~-avalfN~~~~~~~iti~l~~LGL~~~~~~~vr----DlW~g~~~~g~~~~~l~~ 433 (455)
+......+ +....+|.....|++. +|++||....+.+.++++...||+++..| |+ .+++|..+ .+.-+.+
T Consensus 628 ~~~rl~~p~~~~~~~w~~v~~d~~~avv~~~~~~~~~~~~~~~l~l~GL~~~~~Y-v~~~~~~~~sG~~L---m~~Gl~~ 703 (720)
T 2yfo_A 628 TYWRLSDPFTDEIAAWMSVSEEQDHALVSVVRLMAEANQATVYVRLRGLKPDAVY-LEEQSGRQYSGAAL---MHAGIPL 703 (720)
T ss_dssp EEEECSCTTTSSEEEEEEECTTSSEEEEEEEECCCCSSCCCCEECCCSCCTTSEE-EETTTCCEEEHHHH---HHTCEEC
T ss_pred cEEeccCCCCCCceEEEEEeCCCCEEEEEEEeccCCCcccceeeecCCCCCCCeE-EEcCCCcEEcHHHH---HHCCCcC
Confidence 33332221 2236789877777655 56668888877777778888899999999 87 46666655 2222443
Q ss_pred -EEc-CCCEEEEEEEe
Q 012852 434 -QVD-AHDCQMYIFTP 447 (455)
Q Consensus 434 -~L~-pH~~~ll~ltp 447 (455)
.+. +..+.|++|++
T Consensus 704 p~~~~~~~s~~~~l~~ 719 (720)
T 2yfo_A 704 PPFTEEYEAYQFAFTE 719 (720)
T ss_dssp CCCSSTTCEEEEEEEE
T ss_pred CCCCCCceEEEEEEEE
Confidence 233 78999999876
|
| >3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-43 Score=384.81 Aligned_cols=402 Identities=15% Similarity=0.189 Sum_probs=283.0
Q ss_pred eeEeeeeecccceeeeeeeehhhccccccccccccc--ccccceEEEEecc----hhhHHHHHHHhhcccccccccCCCC
Q 012852 15 KMRVGVAMSSMKKKRFVFALVLSLIIDVGFAGRVVV--PLLQSYEKASYSR----GFSRNFGKIFDTSNYGILQLNNGLA 88 (455)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~ 88 (455)
.-++.+|.+...++|+.+ |++|..|.|+|.| +|+||+++++||+ ||+++||+++|+++.+.. ...
T Consensus 257 n~~~~~e~~~~~~~~~~~-----Gi~~~~~~~~L~pGesf~tP~~~~~~s~~Gl~~~s~~~h~~~r~~~~~~~----~~~ 327 (745)
T 3mi6_A 257 NFLDAIEVDQYSTSRILT-----GINPDEFGWNLAPQATFQTPEAILSYTSAGMNQLSQQMASFYQQHLVNPR----FAH 327 (745)
T ss_dssp SEEEEEEECTTSCEEEEE-----EECSTTCCEEECTTCEEECCCEEEEEESBCHHHHHHHHHHHHHHHTSCTT----TTT
T ss_pred ceEEEEEECCCCcEEEEE-----ecCCCCCceEeCCCCEEEccEEEEEEecCCHHHHHHHHHHHHHHhccCcc----ccC
Confidence 456788999999999998 7899999999999 9999999999995 788999999999876532 135
Q ss_pred CCCceEEechhhhCcCCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCC---CCCCCcccCCCCCCCCHHHHHHHH
Q 012852 89 STPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLR---DLKGQLVPDTITFPSGIKALADYV 165 (455)
Q Consensus 89 ~~pP~gwnSW~~~~~~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~r---d~~G~~~~d~~~FP~Gl~~l~~~v 165 (455)
++||||||||++++|++||+.|+++|+.+ +++|+++|+||||||..+. +..|+|.+|++|||+||++|++++
T Consensus 328 ~~~P~~wNsW~~~~~d~tee~il~~ad~~-----~~~G~e~fviDDGW~~~r~~d~~~~Gdw~~d~~kFP~Gl~~lv~~i 402 (745)
T 3mi6_A 328 EERPVLINNWEATYFDFNEAKLMTIVNQA-----KRLGIEMFVLDDGWFGHRDDDTTSLGDWFVDQRKFPDGIEHFSQAV 402 (745)
T ss_dssp SCCCCEEECHHHHTTCCCHHHHHHHHHHH-----HHHTCCEEEECTTCBTTCSSTTSCTTCCSBCTTTCTTHHHHHHHHH
T ss_pred CCCceEEEchHhhCcCCCHHHHHHHHHHH-----HHcCCcEEEECcccccCCCCCcccCCCceeChhhcCccHHHHHHHH
Confidence 78999999999999999999999999999 6789999999999998433 235999999999999999999999
Q ss_pred HhcCCeEEEEecCCcc------------------------------ccCCCCcccccHHhHH-HHHHhcCCcEEEeecCC
Q 012852 166 HGKGLKLGIYSDAGVF------------------------------TCQVRPGSLFHEKDDA-PLFASWGVDYLKYDNCF 214 (455)
Q Consensus 166 ~~~G~k~Glw~~pg~~------------------------------~c~~~Pg~~~~~~~~~-~~~~~wGidylK~D~~~ 214 (455)
|++|||||||++|++. .+.++|++++|+...+ +.+++|||||||+|||.
T Consensus 403 h~~Glk~glW~~Pe~v~~dS~l~~~hPdw~l~~~~g~~~~~r~~~vLD~tnPevr~~i~~~l~~ll~~~GIDy~K~D~nr 482 (745)
T 3mi6_A 403 HQQGMKFGLWFEPEMVSVDSDLYQQHPDWLIHAPKSTPTPGRHQFVLDMARPEVVDYLFKLMSQMIESANLDYIKWDMNR 482 (745)
T ss_dssp HHTTCEEEEEECTTEECSSSSHHHHCGGGBCCCTTCCCCCSSSCEEBCTTCHHHHHHHHHHHHHHHHHHTCSEEEECCCS
T ss_pred HHCCCEEEEEEcccccCCCCHHHHhCcceEEEcCCCceeecCCeEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCC
Confidence 9999999999999630 0157899999997776 57889999999999986
Q ss_pred CCC------CCc------cchhH----HHHHHHHhcCCCeeEeeCCCCC--CChhhhhhhccCeeeecCCCCCChhHHHH
Q 012852 215 NLG------IEP------KKRYP----PMRDALNETGCSIFYSLCEWGV--DDPALWAGKVGNSWRTTGDINDTWASMTS 276 (455)
Q Consensus 215 ~~~------~~~------~~~y~----~m~~AL~~~G~~i~~~~c~~g~--~~p~~w~~~~~~~~Ris~Di~~~W~~~~~ 276 (455)
... ..+ ..+|. .+.+.|++..++++|+.|..|. .++++. ......|. .|.++.-+++.
T Consensus 483 ~i~~~~~~~~~~~~q~~~~~~y~~g~y~ll~~l~~~~P~v~ie~CssGGgR~D~g~L-~~~~~~W~--SD~tDa~eRl~- 558 (745)
T 3mi6_A 483 YATEMFSSRLTSDQQLELPHRYILGVYQLYARLTQAYPNVLFESCASGGGRFDLGMM-YYAPQAWT--SDDTDAAERLL- 558 (745)
T ss_dssp CCCSCCCSSSCGGGGGGHHHHHHHHHHHHHHHHHHHCTTCEEEECSTTTSSCSHHHH-HHSSEEEC--CSCCCHHHHHH-
T ss_pred CCcccCCCcCccccccHHHHHHHHHHHHHHHHHHhhCCCeEEEecCCCCCccChhHH-hcCCcccc--CCCCCHHHHHH-
Confidence 421 111 11222 3445567788999999999765 456543 23456784 45677777654
Q ss_pred HHHhhcccccccCCCC-cCCCCccccCCCCCCHHHHHHHHHHHHHHhCceeecCCCCCCCHHHHHhhccHhHHhh-----
Q 012852 277 IADINDKWASYAGPGG-WNDPDMLEVGNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAV----- 350 (455)
Q Consensus 277 ~~~~~~~~~~~~g~g~-~nDpDmL~vg~~~lT~~E~rt~~slwa~~gsPL~is~Dl~~l~~~~~~lL~N~e~iai----- 350 (455)
|........+..-.+. ..+.....+ +..|+-+.|..++|. +.|-+..||+++++++++.++. .|+.
T Consensus 559 IQ~GtS~~yP~~~mgaHvs~~Pnh~t--~R~~~l~~R~~vAm~----G~~G~eldl~~ls~~e~~~~~~--~i~~YK~~R 630 (745)
T 3mi6_A 559 IQFGTSYGYPQAMMGAHVSAVPNDQM--GRITSLKTRGAVAFF----GDLGYELDITKMAPTELDQVKK--QVAFYKCYR 630 (745)
T ss_dssp HHHHHTTTSCGGGEEEEEECSSCTTT--CCCCCHHHHHHHHTS----SEEEEESCSTTCCHHHHHHHHH--HHHHHHHTH
T ss_pred HHcccchhhCHHHHhccccCCccccC--CCcCCHHHHHHHHhc----cCceeeeChhhCCHHHHHHHHH--HHHHHHHHh
Confidence 3333222222222232 222222223 345677777765433 6677999999999999998874 3443
Q ss_pred --ccCCCCCccEEeeecCCCCceeEEEEEcCCCcEEEE-EEecCCCceeEEEEceecCCCCCCceEEE---EccCCcccc
Q 012852 351 --NQDPLGVQGRKVYVSGTDNCLQVWVGPLSGHRLVVA-LWNRCPKAETITAQWDALGLESSTKVSVR---DLWQHKQVT 424 (455)
Q Consensus 351 --nQd~lG~~~r~v~~~~~~~~~~vw~~~l~dg~~ava-lfN~~~~~~~iti~l~~LGL~~~~~~~vr---DlW~g~~~~ 424 (455)
-|. |...|....+..+....+|.....|++.+|+ +|.....+......+.--||+++..|.|+ ..++|..+
T Consensus 631 ~~i~~--G~~yrL~~p~~~~~~~~a~~~vs~d~~~avv~~~~~~~~~~~~~~~~rl~GLdp~~~Y~v~~g~~~~sG~~L- 707 (745)
T 3mi6_A 631 QLFQF--GKFYRIDSPFVEDGNVTSWQVVSDDQKQAIAARYQLLNHPNAPYTRFYFKGLRPNQRYQINDDPSTYYGDEL- 707 (745)
T ss_dssp HHHHH--SEEEECSCTTSTTCCEEEEEEECTTSSEEEEEEEESSCCSSCCCEEECCCSCCTTCEEEETTCCSCEEHHHH-
T ss_pred HHhcc--ccEEeeCCcccCCCCcEEEEEEcCCCCEEEEEEEEecccCCCCccceECCCCCCCCeEEECCCCEEEeHHHH-
Confidence 332 3222222221001347889888888877766 46655544433334444489999999986 22333332
Q ss_pred ccccceEEEEEc----------CCCEEEEEEEeCC
Q 012852 425 GDAVSSFGAQVD----------AHDCQMYIFTPRT 449 (455)
Q Consensus 425 g~~~~~l~~~L~----------pH~~~ll~ltp~~ 449 (455)
++. -+.++ --.+++|.|..+-
T Consensus 708 --m~~--Gl~~~~~~~~~~~~~d~~s~~~~l~~~~ 738 (745)
T 3mi6_A 708 --MNA--GYFVPTILADGQESKDFYTQLFVVTAIL 738 (745)
T ss_dssp --HHT--CEEECCCCCCSSSCCSSEEEEEEEEECC
T ss_pred --HHC--CCCCCccccccccCCCceEEEEEEehhh
Confidence 111 13333 4567888888764
|
| >3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.84 E-value=5.5e-19 Score=190.31 Aligned_cols=353 Identities=14% Similarity=0.119 Sum_probs=218.9
Q ss_pred ccccceEEEEecchhhHHHHHHHhhcccccccccCC-----CCCCCceEEechhhhC-------cCCCHHHHHHHHHHHH
Q 012852 51 PLLQSYEKASYSRGFSRNFGKIFDTSNYGILQLNNG-----LASTPQMGWNSWNFFA-------CNISETIIKETADALV 118 (455)
Q Consensus 51 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~pP~gwnSW~~~~-------~~i~e~~i~~~ad~~~ 118 (455)
++.|||=...-++-+. .++.+.+......+.. .=++=-.-|.=|+..- ..+|.+..++.+|++
T Consensus 244 ~~~tPWR~i~i~~~~~----~lves~Li~~L~~P~~~~DtsWIkPGk~~w~Ww~~~~~~~~~~~~g~n~~~~k~yIDfA- 318 (641)
T 3a24_A 244 PRNFPWRIAVVTTTDK----DLAATNLSYLLGAPSRMSDLSWIKPGKVAWDWWNDWNLDGVDFVTGVNNPTYKAYIDFA- 318 (641)
T ss_dssp CEECCEEEEEEESSHH----HHHHCCHHHHTSCCCCCSCCTTCCCEEEECSTTTTTCCCSCSSCCSSSHHHHHHHHHHH-
T ss_pred CCCCCCEEEEEcCChh----HhhhCcchhhcCCcccCCCCcccccccEEEEehhcCCCCCcCCcCCCCHHHHHHHHHHH-
Confidence 6789997666654333 3333333322111111 1121124455443332 468999999999999
Q ss_pred HcCCcccCceEEEecCCcCCCCCCCCCCc-ccCCCCCCCCHHHHHHHHHhcCCeEEEEecCCccccCCCCcccccHHhHH
Q 012852 119 STGLAELGYDHVNIDDCWSSPLRDLKGQL-VPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEKDDA 197 (455)
Q Consensus 119 ~~gl~~~G~~~~~iDDGW~~~~rd~~G~~-~~d~~~FP~Gl~~l~~~v~~~G~k~Glw~~pg~~~c~~~Pg~~~~~~~~~ 197 (455)
+++|++|+.||+||+...+ |++ .|+|+ .+|++|++|.|+||+++.||.+.+. ...+++..+
T Consensus 319 ----a~~G~~yvlvD~gW~~~~~---~d~~~~~p~---~di~~l~~Ya~~kgV~i~lw~~~~~--------~~~~~~~~~ 380 (641)
T 3a24_A 319 ----SANGIEYVILDEGWAVNLQ---ADLMQVVKE---IDLKELVDYAASKNVGIILWAGYHA--------FERDMENVC 380 (641)
T ss_dssp ----HHTTCCEEEECTTSBCTTS---CCTTCBCTT---CCHHHHHHHHHHTTCEEEEEEEHHH--------HHTSHHHHH
T ss_pred ----HHcCCCEEEEecccccCCC---CCccccCCc---CCHHHHHHHHHhcCCEEEEEeeCcc--------hHHHHHHHH
Confidence 6799999999999986322 343 56654 3799999999999999999998743 145567899
Q ss_pred HHHHhcCCcEEEeecCCCCCCCccchhHHHHHHHHhcCCCeeEeeCCCCCCChhhhhhhccCee-eec--CCCCCChhH-
Q 012852 198 PLFASWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSW-RTT--GDINDTWAS- 273 (455)
Q Consensus 198 ~~~~~wGidylK~D~~~~~~~~~~~~y~~m~~AL~~~G~~i~~~~c~~g~~~p~~w~~~~~~~~-Ris--~Di~~~W~~- 273 (455)
+++++|||++||+|||..+.......|..+.++..+ ..+++..+ |...|..|.+.|.|.+ |-+ +.-...|..
T Consensus 381 ~~~~~~Gv~gvK~Df~~~~~Q~~v~~y~~i~~~aA~--~~l~V~fH--g~~~P~Gl~RTyPN~~t~EgvrG~E~~~~~~~ 456 (641)
T 3a24_A 381 RHYAEMGVKGFKVDFMDRDDQEMTAFNYRAAEMCAK--YKLILDLH--GTHKPAGLNRTYPNVLNFEGVNGLEQMKWSSP 456 (641)
T ss_dssp HHHHHHTCCEEEEECCCCCSHHHHHHHHHHHHHHHH--TTCEEEEC--SCCCCTTHHHHCTTEEEECCSCCGGGGGTCCT
T ss_pred HHHHHcCCCEEEECCCCCCcHHHHHHHHHHHHHHHH--cCCEEEcC--CCcCCCcccccccchhhhhhhceeeecccccc
Confidence 999999999999999977665567788877776444 45777665 5667888988888875 322 111123311
Q ss_pred ---HHHHHHhhcccccccC-----CCCcCCC---CccccCCCCCCHHHHHHHHHHHHHHhCceeecCCCCCC---CHHHH
Q 012852 274 ---MTSIADINDKWASYAG-----PGGWNDP---DMLEVGNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNM---TAETF 339 (455)
Q Consensus 274 ---~~~~~~~~~~~~~~~g-----~g~~nDp---DmL~vg~~~lT~~E~rt~~slwa~~gsPL~is~Dl~~l---~~~~~ 339 (455)
...+....-..+...| |+.+++. ++...++..+.......|+++++++-|||.+.+|.++- .++..
T Consensus 457 ~~~~~~h~~~lPFtR~~~GpmDYTPg~f~~~~~~~~~~~~~~~~~~tT~a~QLAl~Vvf~SplQm~aD~P~~Y~~~p~~~ 536 (641)
T 3a24_A 457 SVDQVKYDVMIPFIRQVSGPMDYTQGAMRNASKGNYYPCYSEPMSQGTRCRQLALYVVFESPFNMLCDTPSNYMREPEST 536 (641)
T ss_dssp TSCHHHHHTTGGGTHHHHSCCCCCCCCSSEECTTCCCCCSSSCCEESCHHHHHHHHHHSCCSEEEECSCHHHHHTCHHHH
T ss_pred CCCCcceeEeeeehhcccCccccCChhhccccccccccccCCCcccccHHHHHHHHHHHHCHHHHhhcCHhHHhcCcHhH
Confidence 1111101112223334 4555542 33333233344456788999999999999999886421 12223
Q ss_pred HhhccHhHHhhccCCCC-CccEEeeecCCCCceeEEEEEcCCCcEEEEEEecCCCceeEEEEceecCCCCCCceEEEEcc
Q 012852 340 EILSNKEVIAVNQDPLG-VQGRKVYVSGTDNCLQVWVGPLSGHRLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLW 418 (455)
Q Consensus 340 ~lL~N~e~iainQd~lG-~~~r~v~~~~~~~~~~vw~~~l~dg~~avalfN~~~~~~~iti~l~~LGL~~~~~~~vrDlW 418 (455)
++|+ +-|.- ..-+.+... .+..-|.++. ++++++|+..|-.+ +++++|+|+.|+- + +|.+.=+=
T Consensus 537 ~Fi~--------~vPt~WDeT~~L~g~--pGeyvv~ARr-kG~~WyvG~it~~~-~r~~~l~L~FL~~--G-~y~a~iy~ 601 (641)
T 3a24_A 537 AFIA--------EIPTVWDESIVLDGK--MGEYIVTARR-KGDVWYVGGITDWS-ARDIEVDCSFLGD--K-SYHATLFK 601 (641)
T ss_dssp HHHH--------HSCSSCSEEEEEEEE--TTTEEEEEEE-ETTEEEEEEEECSS-CEEEEEECTTSCS--S-CEEEEEEE
T ss_pred HHHH--------hCCCCcccceeccCC--CccEEEEEEE-eCCeEEEEEeeCCC-ceEEEeeccccCC--C-cEEEEEEE
Confidence 4443 11211 123444433 2336788888 67899999988766 8999999998752 2 34332111
Q ss_pred CCcc-------c-----cccccceEEEEEcCCCEEEEEE
Q 012852 419 QHKQ-------V-----TGDAVSSFGAQVDAHDCQMYIF 445 (455)
Q Consensus 419 ~g~~-------~-----~g~~~~~l~~~L~pH~~~ll~l 445 (455)
.+++ . ....++++++.|+|.|-.+++|
T Consensus 602 Dg~~a~~~~~~~~~~~~~V~~~~~L~i~la~~GG~ai~i 640 (641)
T 3a24_A 602 DGVNAHRAGRDYKCESFPIKKDGKLKVHLAPGGGFALKI 640 (641)
T ss_dssp ECTTTTTCTTCEEEEEEEECTTCEEEEEECTTCEEEEEE
T ss_pred eCCcccCCccceEEEEEEECCCCEEEEEEcCCCCEEEEE
Confidence 1221 1 0123567888889988877776
|
| >2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=4.4e-12 Score=137.68 Aligned_cols=312 Identities=13% Similarity=0.102 Sum_probs=187.6
Q ss_pred CCHHHHHHHHHHHHHcCCcccCceEEEe---cCCcCCCCCCCCC---Cc-ccCCCCCCCCHHHHHHHHHhcCCeEEEEec
Q 012852 105 ISETIIKETADALVSTGLAELGYDHVNI---DDCWSSPLRDLKG---QL-VPDTITFPSGIKALADYVHGKGLKLGIYSD 177 (455)
Q Consensus 105 i~e~~i~~~ad~~~~~gl~~~G~~~~~i---DDGW~~~~rd~~G---~~-~~d~~~FP~Gl~~l~~~v~~~G~k~Glw~~ 177 (455)
+|.+..++.+|++ +++|++|+.| |.||.....+..+ +. +|.|+ | .|+.|++|.|+||.++=||.+
T Consensus 368 ~nte~~K~YIDFA-----A~~G~eyvLveGwD~GW~~~~~~~~~~~fd~~~p~pd-~--Dl~eL~~YA~sKGV~iilw~~ 439 (738)
T 2d73_A 368 ANTANVKRYIDFA-----AAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPD-F--DVKEIHRYAARKGIKMMMHHE 439 (738)
T ss_dssp CCHHHHHHHHHHH-----HHTTCSEEEECSCBTTGGGCSSSCCSSCCCSSCBCTT-C--CHHHHHHHHHHTTCEEEEEEE
T ss_pred CCHHHHHHHHHHH-----HHcCCCEEEEEeccCCcccccCccccccccccccCCC-C--CHHHHHHHHHhCCCEEEEEEc
Confidence 7999999999999 6789999999 9999752111222 22 33332 2 499999999999999999998
Q ss_pred CCccccCCCCcccccHHhHHHHHHhcCCcEEEeecCC----CCCC-CccchhHHHHHHHH-hcCCCeeEeeCCCCCCChh
Q 012852 178 AGVFTCQVRPGSLFHEKDDAPLFASWGVDYLKYDNCF----NLGI-EPKKRYPPMRDALN-ETGCSIFYSLCEWGVDDPA 251 (455)
Q Consensus 178 pg~~~c~~~Pg~~~~~~~~~~~~~~wGidylK~D~~~----~~~~-~~~~~y~~m~~AL~-~~G~~i~~~~c~~g~~~p~ 251 (455)
-..... ....+++..++++++|||..||+||.. .+.. +.+...+-..++++ ++...+++..+. ...|.
T Consensus 440 t~~~~~----n~e~~~d~~f~~~~~~Gv~GVKvdF~g~~~~r~~~h~~Q~~v~~Y~~i~~~AA~~~LmVnfHg--~~kPt 513 (738)
T 2d73_A 440 TSASVR----NYERHMDKAYQFMADNGYNSVKSGYVGNIIPRGEHHYGQWMNNHYLYAVKKAADYKIMVNAHE--ATRPT 513 (738)
T ss_dssp CTTBHH----HHHHHHHHHHHHHHHTTCCEEEEECCSSCBSTTCCTTSHHHHHHHHHHHHHHHHTTCEEEETT--SCCCC
T ss_pred CCCchh----hHHHHHHHHHHHHHHcCCCEEEeCccccCcCCcccccchHHHHHHHHHHHHHHHcCcEEEccC--CcCCC
Confidence 643111 123445677899999999999999994 3321 11222222333343 567889999874 45577
Q ss_pred hhhhhccCeeeecC----------CCCCChhHHHHHHHhhcccccccCCCCcC------CCCccccCCCCCCHHHHHHHH
Q 012852 252 LWAGKVGNSWRTTG----------DINDTWASMTSIADINDKWASYAGPGGWN------DPDMLEVGNGGMSYQEYRAHF 315 (455)
Q Consensus 252 ~w~~~~~~~~Ris~----------Di~~~W~~~~~~~~~~~~~~~~~g~g~~n------DpDmL~vg~~~lT~~E~rt~~ 315 (455)
.|.+-|-|..---. +..+....+. -..+...||..|. +.++....+........-.|+
T Consensus 514 Gl~RTYPN~~t~EgvrG~E~~~~~~~~p~H~~~L------PFTR~~~GpMDYTPg~f~~~~~~~~~~~~~~~~tT~a~QL 587 (738)
T 2d73_A 514 GICRTYPNLIGNESARGTEYESFGGNKVYHTTIL------PFTRLVGGPMDYTPGIFETHCNKMNPANNSQVRSTIARQL 587 (738)
T ss_dssp SGGGTCTTEEEECCSCCGGGGGTTCCCTTGGGTG------GGTTTTTSCBCCCCCCSSCBGGGTCTTCCCBCSSCHHHHH
T ss_pred cccccCcchHHHhhhcceeccccCCCCCceeeEC------ceeccCcCccccCCeeeccccccccccCCCcccccHHHHH
Confidence 77776655541110 1222222221 1223445554332 212211111122223456789
Q ss_pred HHHHHHhCceeecCCCCCC---CHHHHHhhccHhHHhhccCCCCCccEEeeecCCCCceeEEEEEcCC-CcEEEEEEecC
Q 012852 316 SIWALMKAPLLIGCDVRNM---TAETFEILSNKEVIAVNQDPLGVQGRKVYVSGTDNCLQVWVGPLSG-HRLVVALWNRC 391 (455)
Q Consensus 316 slwa~~gsPL~is~Dl~~l---~~~~~~lL~N~e~iainQd~lG~~~r~v~~~~~~~~~~vw~~~l~d-g~~avalfN~~ 391 (455)
+++.++-|||.+-+|.++- .++..++|++ +...=| .-+.+.... +..-|.+|.-++ ++++|+-.|-.
T Consensus 588 AlyVv~~SplQm~AD~Pe~Y~~~p~~~~Fik~---VPt~WD----eT~~L~g~p--GeyvviARR~kG~~~WyVG~it~~ 658 (738)
T 2d73_A 588 ALYVTMYSPLQMAADIPENYERFMDAFQFIKD---VALDWD----ETNYLEAEP--GEYITIARKAKDTDDWYVGCTAGE 658 (738)
T ss_dssp HHHHHSCCSEEECCSCHHHHTTSHHHHHHHHH---CCSSEE----EEEEEEEET--TTEEEEEEEETTSSCEEEEEEECT
T ss_pred HHHHHHHhHHHHHhhCHHHHhhCcHHHHHHHh---CCCCcc----cceeeCCcC--ccEEEEEEecCCCCcEEEEEeeCC
Confidence 9999999999999887531 1223344431 111111 223443332 235677777555 78999888866
Q ss_pred CCceeEEEEceecCCCCCCceEEEEccCCcc--------------ccccccceEEEEEcCCCEEEEEEEeC
Q 012852 392 PKAETITAQWDALGLESSTKVSVRDLWQHKQ--------------VTGDAVSSFGAQVDAHDCQMYIFTPR 448 (455)
Q Consensus 392 ~~~~~iti~l~~LGL~~~~~~~vrDlW~g~~--------------~~g~~~~~l~~~L~pH~~~ll~ltp~ 448 (455)
+ +++++|+|+.|+ .+.+|.+.=+=.+++ .....++++++.|+|.|-.+++|.|.
T Consensus 659 ~-~R~l~l~L~FL~--~Gk~y~a~iy~Dg~~a~~~~~p~~~~i~~~~V~~~~~L~i~la~gGG~ai~i~~~ 726 (738)
T 2d73_A 659 N-GHTSKLVFDFLT--PGKQYIATVYADAKDADWKENPQAYTIKKGILTNKSKLNLHAANGGGYAISIKEV 726 (738)
T ss_dssp T-CEEEEEECTTSC--TTCCEEEEEEEECTTCBTTTBTTCEEEEEEEECTTCEEEEEECTTCEEEEEEEEC
T ss_pred C-ceEEEeeccccC--CCCcEEEEEEEeCCCcccccCCcceEEEEEEECCCCEEEEEEcCCCCEEEEEEEc
Confidence 5 899999999874 332343321111211 00233567999999999999999986
|
| >2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=1.5e-12 Score=144.56 Aligned_cols=170 Identities=21% Similarity=0.305 Sum_probs=125.2
Q ss_pred EechhhhCcCCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCcccCCCCCCCCHHHHHHHHHhcCCeEEE
Q 012852 95 WNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLKLGI 174 (455)
Q Consensus 95 wnSW~~~~~~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~~~d~~~FP~Gl~~l~~~v~~~G~k~Gl 174 (455)
|.|+ .++.+.+++.+++.++.+.+.+ ..++.|+||++|+.. + ..++|+.|+++||+ .+.+++++|++|+|+++
T Consensus 272 w~s~-~y~~~y~e~~v~~v~~~~r~~~---IP~dvi~lD~~w~~~-~-~w~dft~d~~~FPd-p~~mv~~Lh~~G~k~~l 344 (773)
T 2f2h_A 272 WLTT-SFTTNYDEATVNSFIDGMAERN---LPLHVFHFDCFWMKA-F-QWCDFEWDPLTFPD-PEGMIRRLKAKGLKICV 344 (773)
T ss_dssp EEEC-CSSSCCCHHHHHHHHHHHHHTT---CCCCEEEECGGGBCT-T-CCSSCCBCTTTCSC-HHHHHHHHHHTTCEEEE
T ss_pred EEec-cccCCCCHHHHHHHHHHHHHcC---CCeeEEEECcccccc-c-ccccceEChhhCCC-HHHHHHHHHHCCCEEEE
Confidence 7777 3556779999999999997744 446999999999973 2 23689999999998 79999999999999999
Q ss_pred EecCCcc--------------------------cc---------CCCCcccccHHhHHHHHHhcCCcEEEeecCCCC---
Q 012852 175 YSDAGVF--------------------------TC---------QVRPGSLFHEKDDAPLFASWGVDYLKYDNCFNL--- 216 (455)
Q Consensus 175 w~~pg~~--------------------------~c---------~~~Pg~~~~~~~~~~~~~~wGidylK~D~~~~~--- 216 (455)
|++|... .| .++|++++|+...++.|.++|||++|+|++...
T Consensus 345 ~i~P~I~~~s~~y~e~~~~g~~vk~~~G~~~~~~~w~g~~~~~DftnP~a~~ww~~~~~~l~d~Gvd~~w~D~~e~~p~d 424 (773)
T 2f2h_A 345 WINPYIGQKSPVFKELQEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPDACKWYADKLKGLVAMGVDCFKTDFGERIPTD 424 (773)
T ss_dssp EECSEECTTSTTHHHHHHHTCBCBCTTSSBCCBSSSSTTBEEBCTTSHHHHHHHHHHHHHHHHTTCCEEEECCCCCCCSS
T ss_pred EecCCcCCCCHHHHHHHHCCceeECCCCCeeeeeecCCCceeeCCCCHHHHHHHHHHHHHHHhcCCCEEEccCCCCCCcc
Confidence 9998420 01 357888899988888889999999999997532
Q ss_pred -----CCCc---cchhH-----HHHHHHHhc---CCCeeEeeCCCCCCChhhhhhhccCeeeecCCCCCChhHHHHHHH
Q 012852 217 -----GIEP---KKRYP-----PMRDALNET---GCSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDTWASMTSIAD 279 (455)
Q Consensus 217 -----~~~~---~~~y~-----~m~~AL~~~---G~~i~~~~c~~g~~~p~~w~~~~~~~~Ris~Di~~~W~~~~~~~~ 279 (455)
+.++ ...|. ...+++++. .|+++++-|.+.. ...|+..| ++|+..+|+.+...+.
T Consensus 425 ~~~~~g~~~~~~hN~y~~~~~~a~~e~l~~~~~~~rp~ilsRS~~aG------sqRy~~~W--sGDn~s~W~~L~~si~ 495 (773)
T 2f2h_A 425 VQWFDGSDPQKMHNHYAYIYNELVWNVLKDTVGEEEAVLFARSASVG------AQKFPVHW--GGDCYANYESMAESLR 495 (773)
T ss_dssp SBCTTCCCHHHHHHHHHHHHHHHHHHHHHTTTCGGGCCEEESCBCTT------GGGSCCEE--CCCCCSSHHHHHHHHH
T ss_pred eeecCCCCHHHhcchhHHHHHHHHHHHHHHhcCCCCceEEeecccCc------cCCCceEe--CCCCcchHHHHHHHHH
Confidence 1111 11232 234556543 3688887665432 12567788 8899999998765543
|
| >2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=2.5e-12 Score=141.35 Aligned_cols=166 Identities=17% Similarity=0.189 Sum_probs=122.1
Q ss_pred EEechhhhCcCCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCcccCCCCCCCCHHHHHHHHHhcCCeEE
Q 012852 94 GWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLKLG 173 (455)
Q Consensus 94 gwnSW~~~~~~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~~~d~~~FP~Gl~~l~~~v~~~G~k~G 173 (455)
.+|+|. ..|++++++.|+.+.+.|+ .++.|+||++|+. ..++|+.|+++||+ ++.++++||++|+|++
T Consensus 180 ~qsr~~----y~~~~ev~~v~~~~~~~~I---P~dvi~lD~~y~~----~~~dft~d~~~FPd-p~~mv~~Lh~~G~k~~ 247 (693)
T 2g3m_A 180 MISRYS----YYPQDKVVELVDIMQKEGF---RVAGVFLDIHYMD----SYKLFTWHPYRFPE-PKKLIDELHKRNVKLI 247 (693)
T ss_dssp EEEETT----CCSHHHHHHHHHHHHHTTC---CEEEEEECGGGSB----TTBTTCCCTTTCSC-HHHHHHHHHHTTCEEE
T ss_pred cccCCc----CCCHHHHHHHHHHHHHcCC---CcceEEEecceec----CCccceEChhhCCC-HHHHHHHHHHCCCEEE
Confidence 347774 3389999999999977443 3699999999986 35689999999998 9999999999999999
Q ss_pred EEecCCccc--------------------------c---------CCCCcccccHHhHHHHHHhcCCcEEEeecCCCCCC
Q 012852 174 IYSDAGVFT--------------------------C---------QVRPGSLFHEKDDAPLFASWGVDYLKYDNCFNLGI 218 (455)
Q Consensus 174 lw~~pg~~~--------------------------c---------~~~Pg~~~~~~~~~~~~~~wGidylK~D~~~~~~~ 218 (455)
+|++|+... | .++|++.+|+....+.|.+.|||++|+|+|.....
T Consensus 248 l~i~P~I~~~~~y~~y~e~~~~fvk~~~G~~~~g~~W~g~~~~~Dftnp~a~~ww~~~~~~l~~~GiDg~w~DmnEp~~f 327 (693)
T 2g3m_A 248 TIVDHGIRVDQNYSPFLSGMGKFCEIESGELFVGKMWPGTTVYPDFFREDTREWWAGLISEWLSQGVDGIWLDMNEPTDF 327 (693)
T ss_dssp EEECSCEECCTTCHHHHHHTTSBCEETTSSBCEEEETTEEEECBCTTSHHHHHHHHHHHHHHHTTTCCEEEECSTTTCCC
T ss_pred EEecCcccCCCCcHHHHHHHhheEECCCCCEEEEEeCCCCeeeeCCCCHHHHHHHHHHHHHHHhcCCcEEEEecCCcccc
Confidence 999985310 0 35788888988888888899999999999864211
Q ss_pred C----------------------------------c--------cchhH-----HHHHHHHhc--CCCeeEeeCCCCCCC
Q 012852 219 E----------------------------------P--------KKRYP-----PMRDALNET--GCSIFYSLCEWGVDD 249 (455)
Q Consensus 219 ~----------------------------------~--------~~~y~-----~m~~AL~~~--G~~i~~~~c~~g~~~ 249 (455)
. + ...|. +..+++++. .|+++++-|.+..
T Consensus 328 ~~~~~~~~~~~~~p~~~~~~~~~~t~p~d~~~~~~g~~~~~~~~hN~Y~~~~~~a~~e~l~~~~~~RpfilsRS~~aG-- 405 (693)
T 2g3m_A 328 SRAIEIRDVLSSLPVQFRDDRLVTTFPDNVVHYLRGKRVKHEKVRNAYPLYEAMATFKGFRTSHRNEIFILSRAGYAG-- 405 (693)
T ss_dssp HHHHHHHHHHTTSCSCBCCCGGGGSCCTTEEEEETTEEEEHHHHGGGHHHHHHHHHHHHHHHTTCCSCCEEESCEETT--
T ss_pred cccccccccccCCcccccccccccccCccceeccCCCcccHHHhhhhhhHHHHHHHHHHHHhhCCCCcEEEEccccCC--
Confidence 0 0 01121 234556554 4888887654432
Q ss_pred hhhhhhhccCeeeecCCCCCChhHHHHHHH
Q 012852 250 PALWAGKVGNSWRTTGDINDTWASMTSIAD 279 (455)
Q Consensus 250 p~~w~~~~~~~~Ris~Di~~~W~~~~~~~~ 279 (455)
...|+..| ++|+..+|+.+...+.
T Consensus 406 ----sqry~~~W--~GD~~s~W~~L~~~i~ 429 (693)
T 2g3m_A 406 ----IQRYAFIW--TGDNTPSWDDLKLQLQ 429 (693)
T ss_dssp ----GGGTCEEE--CCSCCCSHHHHHHHHH
T ss_pred ----CCCCcccc--CCCcccCHHHHHHHHH
Confidence 12566677 8899999998765543
|
| >4ba0_A Alpha-glucosidase, putative, ADG31B; hydrolase; HET: 5GF PGE ARG; 1.85A {Cellvibrio japonicus} PDB: 4b9z_A* 4b9y_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=5.6e-11 Score=132.53 Aligned_cols=162 Identities=16% Similarity=0.139 Sum_probs=118.8
Q ss_pred CCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCC-CCCCCCcccCCCCCCCCHHHHHHHHHhcCCeEEEEecCCcc--
Q 012852 105 ISETIIKETADALVSTGLAELGYDHVNIDDCWSSPL-RDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVF-- 181 (455)
Q Consensus 105 i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~-rd~~G~~~~d~~~FP~Gl~~l~~~v~~~G~k~Glw~~pg~~-- 181 (455)
-+++++++.++.+.+.+ ..++.|+||++|+... .+..|+|+.|+++||+ .+.|++++|++|+|+++|++|+..
T Consensus 274 ~s~~ev~~vv~~~r~~~---IP~Dvi~lD~dw~g~d~~~~~gdftwd~~~FPd-p~~mv~~Lh~~G~k~vl~i~P~I~~~ 349 (817)
T 4ba0_A 274 RSEAETRATVQKYKTED---FPLDTIVLDLYWFGKDIKGHMGNLDWDKENFPT-PLDMMADFKQQGVKTVLITEPFVLTS 349 (817)
T ss_dssp CSHHHHHHHHHHHHHHT---CCCCEEEECGGGSCSSSSSCTTCCSCCTTTCSC-HHHHHHHHHHTTCEEEEEECSEEETT
T ss_pred CCHHHHHHHHHHHHHhC---CCCcEEEEcccccCCccccccCccccccccCCC-HHHHHHHHHHCCCEEEEEeCCCccCC
Confidence 38999999999997743 3469999999998632 2346899999999998 899999999999999999999531
Q ss_pred ------------------------cc---------CCCCcccccHHhHHHHHHhcCCcEEEeecCCCCCC--C-------
Q 012852 182 ------------------------TC---------QVRPGSLFHEKDDAPLFASWGVDYLKYDNCFNLGI--E------- 219 (455)
Q Consensus 182 ------------------------~c---------~~~Pg~~~~~~~~~~~~~~wGidylK~D~~~~~~~--~------- 219 (455)
.| .++|++++|+...++.+.++|||++|+|++..... +
T Consensus 350 s~~y~e~~~~g~~vk~~~G~~~~~~~w~G~~~~~DftnP~ar~ww~~~~~~l~~~GvDg~W~DmnEp~~~p~d~~~~~g~ 429 (817)
T 4ba0_A 350 SKRWDDAVKAKALAKDPQGQPKAFELYFGNGGIIDVFSKEGSRWFSSIYKDLSKQGVAGWWGDLGEPEMHPEDTQHAIGD 429 (817)
T ss_dssp STTHHHHHHTTCBCBCTTSSBCCEEETTEEEEEBCTTSHHHHHHHHHHHHHHHHHTCCEEEECCTTTSSCCTTCEETTEE
T ss_pred cHHHHHHHhCCEEEECCCCCeEEEEecCCCceeecCCCHHHHHHHHHHHHHHHhCCCcEEEecCCCCCcCCccccccCCC
Confidence 01 35788888988888888899999999999864311 1
Q ss_pred ---ccchhH-----HHHHHHHh---cCCCeeEeeCCCCCCChhhhhhhccC-eeeecCCCCCChhHHHHHH
Q 012852 220 ---PKKRYP-----PMRDALNE---TGCSIFYSLCEWGVDDPALWAGKVGN-SWRTTGDINDTWASMTSIA 278 (455)
Q Consensus 220 ---~~~~y~-----~m~~AL~~---~G~~i~~~~c~~g~~~p~~w~~~~~~-~~Ris~Di~~~W~~~~~~~ 278 (455)
....|. ...+++++ ..|+++++=|.+.. ...|+- .| ++|+..+|+.+...+
T Consensus 430 ~~~~hN~Y~~~~~~a~~e~~~~~~~~~RpfilsRs~~aG------sqry~~~~W--sGDn~s~W~~L~~~i 492 (817)
T 4ba0_A 430 ADTVHNAYGHRWAEMLYQQQLDQFPELRPFIMMRAGFVG------SQRYGMIPW--TGDVSRTWGGLASQV 492 (817)
T ss_dssp HHHHGGGHHHHHHHHHHHHHHHHCTTSCCCEEESCCCTT------GGGGTEEEB--CCSCBSSHHHHHTHH
T ss_pred HHHhhhHHHHHHHHHHHHHHHHhcCCCccEEEECcccCc------cccCCccCc--CCcccCCHHHHHHHH
Confidence 012232 23345554 24788887665432 125554 47 889999999876444
|
| >2xvl_A Alpha-xylosidase, putative, XYL31A; hydrolase, glycosyl hydrolase family 31, (beta/alpha)8 barre; HET: PXN; 2.30A {Cellvibrio japonicus} PDB: 2xvg_A* 2xvk_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=2.9e-10 Score=128.76 Aligned_cols=162 Identities=20% Similarity=0.180 Sum_probs=114.5
Q ss_pred CCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCcccCCCCCCCCHHHHHHHHHhcCCeEEEEecCCccc-
Q 012852 104 NISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFT- 182 (455)
Q Consensus 104 ~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~~~d~~~FP~Gl~~l~~~v~~~G~k~Glw~~pg~~~- 182 (455)
..+++++++.++.+.+.+ ..++.|+||++|+.. +..++|+.|+++||+ ++.+++.||++|+|+++|++|....
T Consensus 444 Y~sq~ev~~va~~~re~g---IPlDvi~lD~~y~~~--~~~~dFtwD~~rFPd-p~~mv~~Lh~~G~k~vl~V~P~I~~~ 517 (1020)
T 2xvl_A 444 YKSSDEIIQNLKEYRDRK---IPIDNIVLDWSYWPE--DAWGSHDFDKQFFPD-PKALVDKVHAMNAQIMISVWPKFYPT 517 (1020)
T ss_dssp CCSHHHHHHHHHHHHHTT---CCCCEEEECSCCSCT--TCTTSCCCCTTTCSC-HHHHHHHHHHTTCEEEEEECSEECTT
T ss_pred CCCHHHHHHHHHHHHHcC---CCcceEEEecccccc--CcccceEEChhhCCC-HHHHHHHHHHCCCEEEEEECCccCCC
Confidence 348999999999997743 446899999998752 446889999999998 9999999999999999999985310
Q ss_pred -------------------------c----------CCCCcccc-cHHhHHHHHHhcCCcEEEeecCCCCCC---C----
Q 012852 183 -------------------------C----------QVRPGSLF-HEKDDAPLFASWGVDYLKYDNCFNLGI---E---- 219 (455)
Q Consensus 183 -------------------------c----------~~~Pg~~~-~~~~~~~~~~~wGidylK~D~~~~~~~---~---- 219 (455)
| .++|++.+ |.+...+.+.+.|||++|+|+|..... +
T Consensus 518 s~~Y~e~~~~G~~v~~~~~~~~~~w~wpG~~~~v~DftNPear~~ww~~l~~~l~~~GiDg~W~DmnEps~~~~~d~~~~ 597 (1020)
T 2xvl_A 518 TDNYKELNAKGFMFNRNLDEKNLDWIGKGYLNAFYDPFSPEATAIFWKQIRDKINVHGFDAWWLDAVEPDIHSNLTFEKR 597 (1020)
T ss_dssp SHHHHHHHHTTCEETHHHHTTCCCSSTTCCCCEEECTTSHHHHHHHHHHHHHHTGGGTCCEEEECCTTTCSSTTBCHHHH
T ss_pred chhHHHHHhCCCEEEcCCCCccccccCCCCCceeeCCCChHHHHHHHHHHHHHhhhcCCcEEEecCCCccccCCCCcccc
Confidence 0 23455555 344555778889999999999853320 0
Q ss_pred --------------ccchhH-----HHHHHHHhc---CCCeeEeeCCCCCCChhhhhhhccC-eeeecCCCCCChhHHHH
Q 012852 220 --------------PKKRYP-----PMRDALNET---GCSIFYSLCEWGVDDPALWAGKVGN-SWRTTGDINDTWASMTS 276 (455)
Q Consensus 220 --------------~~~~y~-----~m~~AL~~~---G~~i~~~~c~~g~~~p~~w~~~~~~-~~Ris~Di~~~W~~~~~ 276 (455)
....|. ...+++++. .|+++++-|.+.. ...|+. .| ++|+..+|+.+..
T Consensus 598 ~~l~~~~~~G~~~~vhNlY~~~~~~atye~l~~~~~~kRpfilsRS~~aG------sQRy~~~~W--sGDn~ssW~~L~~ 669 (1020)
T 2xvl_A 598 KWLMTPNARGNGAEIFNAYAVPHAEGVYQGELATDGDKRSFILTRSGFGG------IQRTGSAIW--SGDIVSRWSDMKD 669 (1020)
T ss_dssp HHTTCSBTTBCGGGGTTCTHHHHHHHHHHHHHHHCTTSCCCEEESCCCTT------GGGGTEEEE--CCSCBSSHHHHHH
T ss_pred ccccCcccCCchhhhcchhhHHHHHHHHHHHHHhcCCCceEEEEecccCC------CCcCceeee--CCccCchHHHHHH
Confidence 011232 234556543 4788887654432 125666 77 7899999998765
Q ss_pred HHH
Q 012852 277 IAD 279 (455)
Q Consensus 277 ~~~ 279 (455)
.+.
T Consensus 670 sI~ 672 (1020)
T 2xvl_A 670 QIA 672 (1020)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
|
| >3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=9.7e-10 Score=120.18 Aligned_cols=111 Identities=15% Similarity=0.200 Sum_probs=91.2
Q ss_pred eEEechhhhCcCCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCcccCCCCCCCCHHHHHHHHHhcCCeE
Q 012852 93 MGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLKL 172 (455)
Q Consensus 93 ~gwnSW~~~~~~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~~~d~~~FP~Gl~~l~~~v~~~G~k~ 172 (455)
..+|.|.. -+++.+++.++.+.+.+ ..++.|+||.+|+. ..++++.|+++||+ ++.++++||++|+|+
T Consensus 167 ~~qsr~~Y----~~~~~v~~v~~~~~~~~---IP~dvi~lD~dy~~----~~~~ft~d~~~FPd-p~~mv~~Lh~~G~k~ 234 (666)
T 3nsx_A 167 FGQSRWGY----TTKEDFRAVAKGYRENH---IPIDMIYMDIDYMQ----DFKDFTVNEKNFPD-FPEFVKEMKDQELRL 234 (666)
T ss_dssp EEEEETTC----CSHHHHHHHHHHHHHTT---CCCCEEEECGGGSS----TTCTTCCCTTTCTT-HHHHHHHHHTTTCEE
T ss_pred cccccccc----CCHHHHHHHHHHHHhcC---CCcceEEEecHHHH----hhcccccChhhCCC-HHHHHHHHHHcCceE
Confidence 35576653 28999999999998744 44799999999986 35789999999997 999999999999999
Q ss_pred EEEecCCccc----------------------------c---------CCCCcccccHHhHHHHHHhcCCcEEEeecCCC
Q 012852 173 GIYSDAGVFT----------------------------C---------QVRPGSLFHEKDDAPLFASWGVDYLKYDNCFN 215 (455)
Q Consensus 173 Glw~~pg~~~----------------------------c---------~~~Pg~~~~~~~~~~~~~~wGidylK~D~~~~ 215 (455)
.+|++|+... | .++|++++|....++.+.+.|||.+|.|++..
T Consensus 235 v~~idP~i~~~~~~~~y~e~~~~g~fvk~~~G~~~~g~~WpG~~~~pDftnp~a~~ww~~~~~~~~~~Gidg~W~DmnEp 314 (666)
T 3nsx_A 235 IPIIDAGVKVEKGYEVYEEGVKNNYFCKREDGSDFVAAVWPGDTHFPDMLNPEARKWFGDKYRFLIDQGIEGFWNDMNEP 314 (666)
T ss_dssp EEEEESCEECCTTCHHHHHHHHTTCBCBCTTSCBCCEEETTEEEECBCTTSHHHHHHHHHTTHHHHTTTCCEEEEESTTT
T ss_pred EeeeccceeeecCchHHhhhcccCccccCCCCCcceEEecCCccCCccccCHHHHHHhhhhhhHHHhccchhhhhccCCc
Confidence 9999996310 0 35677888887777778899999999999864
|
| >3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=1.4e-09 Score=121.83 Aligned_cols=109 Identities=16% Similarity=0.174 Sum_probs=86.2
Q ss_pred EEechhhhCcCCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCcccCCCCCCCCHHHHHHHHHhcCCeEE
Q 012852 94 GWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLKLG 173 (455)
Q Consensus 94 gwnSW~~~~~~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~~~d~~~FP~Gl~~l~~~v~~~G~k~G 173 (455)
.+|.|. .-+++++++.++.+.+.+ ..++.+++|++|+.. .++|+.|+++||+ ++.|+++||++|+|+.
T Consensus 295 ~qsr~~----Y~s~~ev~~vv~~~r~~~---IP~Dvi~lDidy~~~----~~dFt~D~~~FPd-p~~mv~~Lh~~G~k~v 362 (875)
T 3l4y_A 295 HLSRYE----YGTLDNMREVVERNRAAQ---LPYDVQHADIDYMDE----RRDFTYDSVDFKG-FPEFVNELHNNGQKLV 362 (875)
T ss_dssp EECCSC----CCSHHHHHHHHHHHHHTT---CCCCEEEECGGGSBT----TBTTCCCTTTTTT-HHHHHHHHHHTTCEEE
T ss_pred ceeccC----CCCHHHHHHHHHHHHhcC---CCCceEEEccchhcC----CCceeeChhhCCC-HHHHHHHHHHCCCEEE
Confidence 455553 348999999999997743 446999999999873 4789999999997 9999999999999999
Q ss_pred EEecCCccc---------------------------------c---------CCCCcccccHHhHHHH-HHhcCCcEEEe
Q 012852 174 IYSDAGVFT---------------------------------C---------QVRPGSLFHEKDDAPL-FASWGVDYLKY 210 (455)
Q Consensus 174 lw~~pg~~~---------------------------------c---------~~~Pg~~~~~~~~~~~-~~~wGidylK~ 210 (455)
+|++|+... | .++|++.+|+...++. +.+.|||++|+
T Consensus 363 ~~idP~I~~~s~~~~~y~~y~eg~~~g~fvk~~dG~~~~~g~~WpG~~~~pDFtnP~a~~WW~~~~k~~~~~~gidg~W~ 442 (875)
T 3l4y_A 363 IIVDPAISNNSSSSKPYGPYDRGSDMKIWVNSSDGVTPLIGEVWPGQTVFPDYTNPNCAVWWTKEFELFHNQVEFDGIWI 442 (875)
T ss_dssp EEECSCEECCCCSSSCCHHHHHHHHHTCBCBCTTSSSBCCEEETTEEEECBCTTSHHHHHHHHHHHHHHHTTSCCSEEEE
T ss_pred EEeCCccccCcccccccHHHHHHHHCCeEEECCCCCcceEEEecCCCccCcCCCCHHHHHHHHHHHHHHHhhcCCcEEEE
Confidence 999996310 0 1456667777666655 46899999999
Q ss_pred ecCC
Q 012852 211 DNCF 214 (455)
Q Consensus 211 D~~~ 214 (455)
|++.
T Consensus 443 DmnE 446 (875)
T 3l4y_A 443 DMNE 446 (875)
T ss_dssp CSTT
T ss_pred cCCC
Confidence 9873
|
| >3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=1.8e-09 Score=121.33 Aligned_cols=103 Identities=17% Similarity=0.181 Sum_probs=82.7
Q ss_pred CCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCcccCCCCCCCCHHHHHHHHHhcCCeEEEEecCCccc-
Q 012852 104 NISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFT- 182 (455)
Q Consensus 104 ~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~~~d~~~FP~Gl~~l~~~v~~~G~k~Glw~~pg~~~- 182 (455)
.-+++++++.++.+.+.+ ..++.|++|++|+.. .++|+.|+++||+ ++.|++.||++|+|+.+|++|+...
T Consensus 329 Y~s~~ev~~vv~~~r~~~---IP~Dvi~lDidy~~~----~~dFt~D~~~FPd-p~~mv~~Lh~~G~k~vl~idP~I~~~ 400 (898)
T 3lpp_A 329 YKSLDVVKEVVRRNREAG---IPFDTQVTDIDYMED----KKDFTYDQVAFNG-LPQFVQDLHDHGQKYVIILDPAISIG 400 (898)
T ss_dssp CCSHHHHHHHHHHHHHTT---CCCCEEEECGGGSST----TCTTCCCTTTTTT-HHHHHHHHHHTTCEEEEEECSCEECS
T ss_pred CCCHHHHHHHHHHHHHcC---CCceeeEeccccccC----CCcceEChhhCCC-HHHHHHHHHHCCCEEEEEeCCccccC
Confidence 358999999999997743 336999999999873 4789999999995 9999999999999999999996310
Q ss_pred ---------------------------------c---------CCCCcccccHHhHHHH-HHhcCCcEEEeecCC
Q 012852 183 ---------------------------------C---------QVRPGSLFHEKDDAPL-FASWGVDYLKYDNCF 214 (455)
Q Consensus 183 ---------------------------------c---------~~~Pg~~~~~~~~~~~-~~~wGidylK~D~~~ 214 (455)
| .++|++.+|+...++. +.+.|||++|+|+|.
T Consensus 401 ~~~~~~~Y~~y~eg~~~g~fvk~~~G~~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~~giDg~W~DmnE 475 (898)
T 3lpp_A 401 RRANGTTYATYERGNTQHVWINESDGSTPIIGEVWPGLTVYPDFTNPNCIDWWANECSIFHQEVQYDGLWIDMNE 475 (898)
T ss_dssp CCTTSCCCHHHHHHHHHTCBCBCTTSSSBCCEEETTEEEECBCTTSHHHHHHHHHHHHHHHHHSCCSEEEECSTT
T ss_pred CcccccccHHHHHHHhCCcEEECCCCCceeEEEecCCCccccCCCCHHHHHHHHHHHHHHHhcCCccEEEEeCCC
Confidence 0 1356667777655554 468999999999974
|
| >3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* | Back alignment and structure |
|---|
Probab=98.42 E-value=3.8e-05 Score=84.29 Aligned_cols=323 Identities=14% Similarity=0.102 Sum_probs=175.8
Q ss_pred CHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCC-------------CCCC-----------CcccCCCCCC--CCHH
Q 012852 106 SETIIKETADALVSTGLAELGYDHVNIDDCWSSPLR-------------DLKG-----------QLVPDTITFP--SGIK 159 (455)
Q Consensus 106 ~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~r-------------d~~G-----------~~~~d~~~FP--~Gl~ 159 (455)
|-+.|.+.++.+ +++|++.|.|=--+..... +..| ...+|+ +|- +.++
T Consensus 251 d~~gi~~~LdyL-----k~LGvt~I~L~Pi~~~~~~~~~g~~n~~~~~~~d~GspY~i~d~~~~y~~idp-~~Gt~edfk 324 (695)
T 3zss_A 251 TFRTAARRLPAI-----AAMGFDVVYLPPIHPIGTTHRKGRNNTLSATGDDVGVPWAIGSPEGGHDSIHP-ALGTLDDFD 324 (695)
T ss_dssp CHHHHGGGHHHH-----HHTTCCEEEECCCSCBCCTTCCCGGGCSSCCTTCCCCTTSBCBTTBCTTSCCT-TTCCHHHHH
T ss_pred CHHHHHHHHHHH-----HhCCCCEEEECCcccCCccccccccccccccccCCCCcccccCCCCCccccCc-ccCCHHHHH
Confidence 568888888888 7799998887543332110 0112 345554 454 2599
Q ss_pred HHHHHHHhcCCeEEEEecCC---------------------cc-----------c----cCCC--CcccccHHhHHHHHH
Q 012852 160 ALADYVHGKGLKLGIYSDAG---------------------VF-----------T----CQVR--PGSLFHEKDDAPLFA 201 (455)
Q Consensus 160 ~l~~~v~~~G~k~Glw~~pg---------------------~~-----------~----c~~~--Pg~~~~~~~~~~~~~ 201 (455)
.|++.+|++||++-+=+.+. .. . ...+ |.+++++...+..+.
T Consensus 325 ~LV~~aH~~GI~VilD~V~Nhs~~~~~~~~~~dwf~~~~dg~~~~~~~~~~~~~~~~dLn~~n~~p~V~~~l~~~l~~Wi 404 (695)
T 3zss_A 325 HFVTEAGKLGLEIALDFALQCSPDHPWVHKHPEWFHHRPDGTIAHAENPPKKYQDIYPIAFDADPDGLATETVRILRHWM 404 (695)
T ss_dssp HHHHHHHHTTCEEEEEECCEECTTSTHHHHCGGGSCCCTTSCCCCEEETTEEETTCEECCCSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEeeccCCccchhhhcccceeeecCCCCcccCCCCCccccccccccccCCcHHHHHHHHHHHHHHH
Confidence 99999999999998755321 00 0 0124 778888888888877
Q ss_pred hcCCcEEEeecCCCCCCCccchhHHHHHHHHhcCCCeeEeeCCCCCCChhh---hhh-hccCeeeecCCCCCChhHHHHH
Q 012852 202 SWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPAL---WAG-KVGNSWRTTGDINDTWASMTSI 277 (455)
Q Consensus 202 ~wGidylK~D~~~~~~~~~~~~y~~m~~AL~~~G~~i~~~~c~~g~~~p~~---w~~-~~~~~~Ris~Di~~~W~~~~~~ 277 (455)
+.|||.+.+|..... +.+..+.+.+++++..+++++..-.|. .|.. +.. ++...+.-. ........+...
T Consensus 405 ~~GVDGfRlD~a~~~---~~~f~~~~~~~v~~~~pd~~~vgE~~~--~p~~~~~l~~~gfd~~~~y~-~~~~~~~~l~~~ 478 (695)
T 3zss_A 405 DHGVRIFRVDNPHTK---PVAFWERVIADINGTDPDVIFLAEAFT--RPAMMATLAQIGFQQSYTYF-TWRNTKQELTEY 478 (695)
T ss_dssp HTTCCEEEESSGGGS---CHHHHHHHHHHHHHHCTTCEEEECCCS--CHHHHHHHHHTTCSEEECSG-GGCCSHHHHHHH
T ss_pred HhCCCEEEecCcchh---hHHHHHHHHHHHHhhCCCceEEEeecC--ChHHhhhhhccCcCceechh-hhhcchhHHHHH
Confidence 899999999986432 344556788888877777665544453 3432 111 221111100 000112222222
Q ss_pred HHh-hcccccccCCCCc-CCCCccccCCCCCCHHHHHHHHHH-HHHHhCceeecCC---------CC-------------
Q 012852 278 ADI-NDKWASYAGPGGW-NDPDMLEVGNGGMSYQEYRAHFSI-WALMKAPLLIGCD---------VR------------- 332 (455)
Q Consensus 278 ~~~-~~~~~~~~g~g~~-nDpDmL~vg~~~lT~~E~rt~~sl-wa~~gsPL~is~D---------l~------------- 332 (455)
+.. +.....+..+..| ..+|....-...-.....+..+++ ..+.|.|++..++ ..
T Consensus 479 ~~~l~~~~~~~~~~~~FvdNHD~~R~~s~~g~~~~~kla~all~tl~GiP~IYyGdE~G~~g~~dp~~~ey~d~e~~~r~ 558 (695)
T 3zss_A 479 LTELSGEAASYMRPNFFANTPDILHAYLQHGGRPAFEVRAVLAATLSPTWGIYSGYELCENTPLREGSEEYLDSEKYQLK 558 (695)
T ss_dssp HHHHTTGGGGTCCEEEESCBTTBCCHHHHHHCHHHHHHHHHHHHHHCSEEEEETTGGGTCCCBSSTTCCSBTTCTTSSCC
T ss_pred HHhhhhhhhhcccceecccCCCccchhcccchHHHHHHHHHHHHhcCCCcEEEcCeeccccCCCCCCccccccccccccC
Confidence 221 1112222222222 334543210000001222222233 2344778877543 11
Q ss_pred CCC--------HHHHHhhccHhHHhhccC--CC--CCccEEeeecCCCCceeEEEEEcCCCcEEEEEEecCC---CceeE
Q 012852 333 NMT--------AETFEILSNKEVIAVNQD--PL--GVQGRKVYVSGTDNCLQVWVGPLSGHRLVVALWNRCP---KAETI 397 (455)
Q Consensus 333 ~l~--------~~~~~lL~N~e~iainQd--~l--G~~~r~v~~~~~~~~~~vw~~~l~dg~~avalfN~~~---~~~~i 397 (455)
.++ .+..+.++ .+|++-+. .| |...+.+..+ +...-++.+... ++.+++++|.++ ++.++
T Consensus 559 p~~W~~~~~~~~~l~~~ik--~Li~LRk~~paL~~g~~~~~~~~~--~~~vlaf~R~~~-~~~vlVviN~s~~~~~~~tv 633 (695)
T 3zss_A 559 PRDWTRAAREGTTIAPLVT--RLNTIRRENPALRQLRDLHFHPTD--KEEVIAYSKRQG-SNTVLVVVNLDPRHTQEATV 633 (695)
T ss_dssp CCCHHHHHHHTCSCHHHHH--HHHHHHHHCGGGGCSSCCEECCBS--CTTEEEEEEEET-TEEEEEEEECCSSSCEEEEE
T ss_pred CCCccccccccchHHHHHH--HHHHHHHhCHHhcCCCcEEEEEcC--CCcEEEEEEEcC-CCEEEEEEECCCCCCceEEE
Confidence 011 01122222 34444322 11 2223333221 122556777665 467888999985 45567
Q ss_pred EEEceecCCCCCCceEEEEccCCccccccccceEEEEEcCCC--EEEEEEEe
Q 012852 398 TAQWDALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQVDAHD--CQMYIFTP 447 (455)
Q Consensus 398 ti~l~~LGL~~~~~~~vrDlW~g~~~~g~~~~~l~~~L~pH~--~~ll~ltp 447 (455)
++++..+|+..+..+.++|+.+++.. . ..+.-.++|+|++ ..++++.+
T Consensus 634 ~Lp~~~~g~~~~~~~~~~Dllsg~~~-~-~g~~~~v~L~p~~~~~~i~~~~~ 683 (695)
T 3zss_A 634 SLDMPQLGLDWHESVPVRDELTGETY-H-WGRANYVRLEPGRTPAHVCTVLR 683 (695)
T ss_dssp ECCHHHHTCCTTCEEEEEETTTCCEE-E-EESEEEEEECTTTCSEEEEEECC
T ss_pred EeCcHHhCCCCCCceEEEECCCCCEE-e-eCCccEEEECCCCceEEEEEEec
Confidence 77778889877777899999999986 3 3444459999998 88888863
|
| >3top_A Maltase-glucoamylase, intestinal; membrane, hydrolase-hydrolase inhibitor complex; HET: ACR; 2.88A {Homo sapiens} PDB: 3ton_A* | Back alignment and structure |
|---|
Probab=98.40 E-value=5.2e-06 Score=93.09 Aligned_cols=74 Identities=15% Similarity=0.278 Sum_probs=61.9
Q ss_pred EEechhhhCcCCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCcccCCCCCCCCHHHHHHHHHhcCCeEE
Q 012852 94 GWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLKLG 173 (455)
Q Consensus 94 gwnSW~~~~~~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~~~d~~~FP~Gl~~l~~~v~~~G~k~G 173 (455)
..|.|.+ -+++++++.++.+.+. ...++.+.+|..|... ..+++.|+ +||+ ++.|++++|++|+|+-
T Consensus 296 ~qsR~~Y----~~~~ev~~vv~~~r~~---~IPlDvi~~Didym~~----~~~FT~d~-~FPd-p~~mv~~Lh~~G~k~v 362 (908)
T 3top_A 296 QLCRYGY----QNDSEIASLYDEMVAA---QIPYDVQYSDIDYMER----QLDFTLSP-KFAG-FPALINRMKADGMRVI 362 (908)
T ss_dssp EECCTTC----CSHHHHHHHHHHHHHH---TCCCCEEEECGGGSST----TCTTCCCG-GGTT-HHHHHHHHHHHTCEEE
T ss_pred ccccccC----CCHHHHHHHHHHHHHc---CCCeeeEEeecccccc----ccccccCC-CCCC-HHHHHHHHHHCCCEEE
Confidence 4555542 4789999999999884 4558999999999763 45788999 9997 9999999999999999
Q ss_pred EEecCCc
Q 012852 174 IYSDAGV 180 (455)
Q Consensus 174 lw~~pg~ 180 (455)
++++|+.
T Consensus 363 ~iidP~I 369 (908)
T 3top_A 363 LILDPAI 369 (908)
T ss_dssp EEECSCE
T ss_pred EEeCCcc
Confidence 9999853
|
| >3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A | Back alignment and structure |
|---|
Probab=97.84 E-value=0.00084 Score=72.33 Aligned_cols=136 Identities=13% Similarity=0.011 Sum_probs=85.8
Q ss_pred CcCCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCC--CCCC-----cccCCCCCCC--CHHHHHHHHHhcCCeE
Q 012852 102 ACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRD--LKGQ-----LVPDTITFPS--GIKALADYVHGKGLKL 172 (455)
Q Consensus 102 ~~~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd--~~G~-----~~~d~~~FP~--Gl~~l~~~v~~~G~k~ 172 (455)
++.=|-+.|.+.++.+ +++|++.|.|---......+ ..|. ..+|+ +|-. .++.|++.+|++||++
T Consensus 142 ~~gGdl~gi~~~Ldyl-----~~LGv~aI~l~Pi~~~~~~~~~~~GY~~~dy~~idp-~~Gt~~df~~Lv~~aH~~Gi~V 215 (601)
T 3edf_A 142 RHGGDIRGTIDHLDYI-----AGLGFTQLWPTPLVENDAAAYSYHGYAATDHYRIDP-RYGSNEDFVRLSTEARKRGMGL 215 (601)
T ss_dssp CCCCCHHHHHHTHHHH-----HHTTCCEEEESCCEECCCSSSGGGCCSCSEEEEECT-TTCCHHHHHHHHHHHHHTTCEE
T ss_pred ccCcCHHHHHHHHHHH-----HHcCCCEEEECccccCCCCCCCCCCcCccccccccc-cCCCHHHHHHHHHHHHHcCCEE
Confidence 3556788899999998 77899888875333221111 0122 24554 4532 4999999999999998
Q ss_pred EEEecCC-----c----------------------c--c--------------c-------------CCCCcccccHHhH
Q 012852 173 GIYSDAG-----V----------------------F--T--------------C-------------QVRPGSLFHEKDD 196 (455)
Q Consensus 173 Glw~~pg-----~----------------------~--~--------------c-------------~~~Pg~~~~~~~~ 196 (455)
=+=+-+- . . . | ..+|.+++++...
T Consensus 216 ilD~V~NH~~~~~~~~~~~p~~dw~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wf~~~lpdLN~~np~V~~~l~~~ 295 (601)
T 3edf_A 216 IQDVVLSHIGKHHWWMKDLPTPDWINYGGKFVPTQHHRVAVQDPYAAQADSENFTKGWFVEGMPDLNQTNPLVANYLIQN 295 (601)
T ss_dssp EEEECCSBCCTTSGGGGSCSSTTSBGGGGSCCBCCCCGGGGGCTTCCHHHHHHHHHSBSSTTSCBBCTTSHHHHHHHHHH
T ss_pred EEEECCcccCCcchhhhhCCccCceeeCCCCCCCccccccccCCCCccccccccccccccccccccccCCHHHHHHHHHH
Confidence 6533210 0 0 0 0 1356677777777
Q ss_pred HHHHH-hcCCcEEEeecCCCCCCCccchhHHHHHHHHhcCCCeeEeeCCCC
Q 012852 197 APLFA-SWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWG 246 (455)
Q Consensus 197 ~~~~~-~wGidylK~D~~~~~~~~~~~~y~~m~~AL~~~G~~i~~~~c~~g 246 (455)
+..+. +.|||.+.+|....- +.+..+.+++++++..+++++-.-.|.
T Consensus 296 ~~~Wi~~~GVDGfRlD~~~~~---~~~f~~~~~~~v~~~~p~~~~vgE~~~ 343 (601)
T 3edf_A 296 NIWWIEYAGLSGLRIDTYGYS---DGAFLTEYTRRLMAEYPRLNMVGQEWS 343 (601)
T ss_dssp HHHHHHHHTCSEEEESSGGGS---CHHHHHHHHHHHHHHCTTCEEEECCCC
T ss_pred HHHHHhhcCCCEEEeeccccC---CHHHHHHHHHHHHHhCCCeEEEeeecC
Confidence 77766 899999999997533 234456777777776666655433343
|
| >2x2h_A Alpha-1,4-glucan lyase isozyme 1; anhydrofructose pathway, glycoside hydrolase family 3 starch binding domain; 2.06A {Gracilariopsis lemaneiformis} PDB: 2x2i_A* 2x2j_A* | Back alignment and structure |
|---|
Probab=97.76 E-value=8e-05 Score=84.92 Aligned_cols=101 Identities=15% Similarity=0.173 Sum_probs=74.6
Q ss_pred CHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCcccCCCC----------CCCCHHHHHHHHHhcCCeEEEE
Q 012852 106 SETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTIT----------FPSGIKALADYVHGKGLKLGIY 175 (455)
Q Consensus 106 ~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~~~d~~~----------FP~Gl~~l~~~v~~~G~k~Glw 175 (455)
+++.+++.++.+.+.+ ..++.|.+|..|....| +++.|+++ ||+ .+.+++.+|++|+++-+|
T Consensus 377 ~~~~v~~vv~~~r~~~---IPlDvi~lDidymd~~r----~FT~D~~~~~~~~~~~~~fPd-p~~mv~~Lh~~G~k~v~i 448 (1027)
T 2x2h_A 377 NNISVEEIVEGYQNNN---FPFEGLAVDVDMQDNLR----VFTTKGEFWTANRVGTGGDPN-NRSVFEWAHDKGLVCQTN 448 (1027)
T ss_dssp TCCBHHHHHHHHHHTT---CCCCEEEECGGGSSTTC----TTCCCGGGBTTSSCCCSCCTT-SCBHHHHHHHTTCEEEEE
T ss_pred cHHHHHHHHHHHHHcC---CCCcceEEecccccCCC----ccccccccCchhhcccccCCC-HHHHHHHHHhCCeEEEEE
Confidence 5677999999998854 44799999999986433 45555544 476 889999999999999988
Q ss_pred ecCCccc------------------------------------------------------c----CCCCcccccHHhHH
Q 012852 176 SDAGVFT------------------------------------------------------C----QVRPGSLFHEKDDA 197 (455)
Q Consensus 176 ~~pg~~~------------------------------------------------------c----~~~Pg~~~~~~~~~ 197 (455)
+.|.... | .++|.+.+|.....
T Consensus 449 idP~i~~~~~~~~y~~~~e~~~~g~fvk~~~~~~~~~~~~~dG~~~~y~g~vWpg~~~~g~~~~pDFtnp~a~~WW~~~~ 528 (1027)
T 2x2h_A 449 ITCFLRNDNEGQDYEVNQTLRERQLYTKNDSLTGTDFGMTDDGPSDAYIGHLDYGGGVECDALFPDWGRPDVAEWWGNNY 528 (1027)
T ss_dssp ECSCEECCCTTCCCHHHHHHHHTTCBCBSCCSSCCCCCCCTTCCTTBCCEEEECSTTCEEEEECBCTTSTTHHHHHHHTT
T ss_pred ecceeccCCcccccHHHHHHHhCCeEEecCccCcccccccCCCCCcceeeeeccCCCccCceeccCCCCHHHHHHHHHHH
Confidence 8763200 0 12445566766666
Q ss_pred HHHHhcCCcEEEeecCC
Q 012852 198 PLFASWGVDYLKYDNCF 214 (455)
Q Consensus 198 ~~~~~wGidylK~D~~~ 214 (455)
+.|.+.|||+++.|+|.
T Consensus 529 k~l~~~GvDg~W~DmnE 545 (1027)
T 2x2h_A 529 KKLFSIGLDFVWQDMTV 545 (1027)
T ss_dssp HHHHTTTCCEEEECSTT
T ss_pred HHHhhCCCCEEEEcCCC
Confidence 67779999999999973
|
| >1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* | Back alignment and structure |
|---|
Probab=97.50 E-value=0.013 Score=62.83 Aligned_cols=132 Identities=18% Similarity=0.244 Sum_probs=83.0
Q ss_pred CHHHHHHHHHHHHHcCCcccCceEEEecCCcCCC---CCCCCCCcccCCCCCC--CCHHHHHHHHHhcCCeEEEEecCCc
Q 012852 106 SETIIKETADALVSTGLAELGYDHVNIDDCWSSP---LRDLKGQLVPDTITFP--SGIKALADYVHGKGLKLGIYSDAGV 180 (455)
Q Consensus 106 ~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~---~rd~~G~~~~d~~~FP--~Gl~~l~~~v~~~G~k~Glw~~pg~ 180 (455)
|-+.|.+.++.+ +++|++.|.|=--+... +-+..+...+|+ +|. +.++.|++.+|++||++=|=+-+.-
T Consensus 174 ~~~gi~~~LdyL-----k~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp-~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH 247 (588)
T 1j0h_A 174 DLQGIIDHLDYL-----VDLGITGIYLTPIFRSPSNHKYDTADYFEVDP-HFGDKETLKTLIDRCHEKGIRVMLDAVFNH 247 (588)
T ss_dssp CHHHHHHTHHHH-----HHHTCCEEEECCCEECSSSSCCSCSEEEEECT-TTCCHHHHHHHHHHHHHTTCEEEEEECCSB
T ss_pred CHHHHHHHHHHH-----HHcCCCEEEECCcccCCCCCCcCccccCccCc-cCCCHHHHHHHHHHHHHCCCEEEEEECcCc
Confidence 677787888888 77899888775332221 111112234554 453 3599999999999999877553310
Q ss_pred --------------------------------------c-c---c-------CCCCcccccHHhHHHHHH-hcCCcEEEe
Q 012852 181 --------------------------------------F-T---C-------QVRPGSLFHEKDDAPLFA-SWGVDYLKY 210 (455)
Q Consensus 181 --------------------------------------~-~---c-------~~~Pg~~~~~~~~~~~~~-~wGidylK~ 210 (455)
+ + | ..+|.+++++...+..+. +.|||.+.+
T Consensus 248 ~~~~~~~f~~~~~~g~~s~y~dwy~~~~~~~~~~~~~~y~~~~~~~~~pdLn~~np~Vr~~l~~~~~~Wl~~~giDGfR~ 327 (588)
T 1j0h_A 248 CGYEFAPFQDVWKNGESSKYKDWFHIHEFPLQTEPRPNYDTFAFVPQMPKLNTANPEVKRYLLDVATYWIREFDIDGWRL 327 (588)
T ss_dssp CCTTCHHHHHHHHHGGGCTTGGGBCBSSSSCCCSSSCSBCBSTTCTTSBBBCTTSHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_pred CcccchhHHHHHhcCCCCCcccccccccCCCCCCCCCCeEEecCCCCccccccCCHHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 0 0 0 124556667666666655 899999999
Q ss_pred ecCCCCCCCccchhHHHHHHHHhcCCCeeEeeCCCC
Q 012852 211 DNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWG 246 (455)
Q Consensus 211 D~~~~~~~~~~~~y~~m~~AL~~~G~~i~~~~c~~g 246 (455)
|....- +.+..+.+++++++..+++++-.-.|.
T Consensus 328 D~a~~~---~~~f~~~~~~~v~~~~p~~~~igE~~~ 360 (588)
T 1j0h_A 328 DVANEI---DHEFWREFRQEVKALKPDVYILGEIWH 360 (588)
T ss_dssp TTGGGS---CHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred eccccC---CHHHHHHHHHHHHHhCCCeEEEEEecC
Confidence 975432 345557788888877766554433343
|
| >1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=97.33 E-value=0.0052 Score=65.91 Aligned_cols=132 Identities=16% Similarity=0.201 Sum_probs=84.9
Q ss_pred CHHHHHHHHHHHHHcCCcccCceEEEecCCcCCC---CCCCCCCcccCCCCCC--CCHHHHHHHHHhcCCeEEEEecCC-
Q 012852 106 SETIIKETADALVSTGLAELGYDHVNIDDCWSSP---LRDLKGQLVPDTITFP--SGIKALADYVHGKGLKLGIYSDAG- 179 (455)
Q Consensus 106 ~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~---~rd~~G~~~~d~~~FP--~Gl~~l~~~v~~~G~k~Glw~~pg- 179 (455)
|...|.+.++.+ +++|++.|.|---+... +-+..+...+|+ +|. ..++.|++.+|++||++=|=+-+.
T Consensus 170 d~~gi~~~LdyL-----k~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp-~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH 243 (583)
T 1ea9_C 170 DLQGVIDHLDHL-----SKLGVNAVYFTPLFKATTNHKYDTEDYFQIDP-QFGDKDTLKKLVDLCHERGIRVLLDAVFNH 243 (583)
T ss_dssp CHHHHHHTHHHH-----HHHTCSEEEECCCSSCSSSSTTSCSCTTCCCT-TTCCHHHHHHHHHHHTTTTCEEEEECCCSB
T ss_pred CHHHHHHhhHHH-----HHcCCCEEEECCCccCCCCCCcCcccccccCc-ccCCHHHHHHHHHHHHHCCCEEEEEEcccc
Confidence 677777778888 77999999886544321 111122334554 453 359999999999999987744221
Q ss_pred --------------------------------------c-ccc----------CCCCcccccHHhHHHHHH-hcCCcEEE
Q 012852 180 --------------------------------------V-FTC----------QVRPGSLFHEKDDAPLFA-SWGVDYLK 209 (455)
Q Consensus 180 --------------------------------------~-~~c----------~~~Pg~~~~~~~~~~~~~-~wGidylK 209 (455)
. ..| ..+|.+++++...+..+. +.|||.+.
T Consensus 244 ~~~~~~~f~~~~~~g~~s~y~~~y~~~~~~~~~~~~~~~y~~~~~~~~~pdln~~~p~Vr~~l~~~~~~W~~~~gvDGfR 323 (583)
T 1ea9_C 244 SGRTFPPFVDVLKNGEKSKYKDWFHIRSLPLEVVDGIPTYDTFAFEPLMPKLNTEHPDVKEYLLKAAEYWIRETGIDGWR 323 (583)
T ss_dssp CCTTTHHHHHHHTTTTTCTTTTSSCBCSSSCCCTTSCCSBCBSSSCTTSBBCCTTSHHHHHHHHHHHHHHHHHHCCSEEE
T ss_pred CCCccHHHHHHHhcCCCCCccCceEecCCCCCCCCCCCCceecCCCCCcceeccCCHHHHHHHHHHHHHHHHhcCceEEE
Confidence 0 011 124556677766666665 99999999
Q ss_pred eecCCCCCCCccchhHHHHHHHHhcCCCeeEeeCCCC
Q 012852 210 YDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWG 246 (455)
Q Consensus 210 ~D~~~~~~~~~~~~y~~m~~AL~~~G~~i~~~~c~~g 246 (455)
+|....- +.+..+.+++++++..+++++-.-.|.
T Consensus 324 ~D~~~~~---~~~f~~~~~~~v~~~~p~~~~igE~~~ 357 (583)
T 1ea9_C 324 LDVANEV---SHQFWREFRRVVKQANPDAYILGEVWH 357 (583)
T ss_dssp ETTCTTS---CHHHHHHHHHHHHHHCTTCEEEECCCS
T ss_pred ecccccC---CHHHHHHHHHHHHhhCCCeEEEEEEcC
Confidence 9975432 244557788888877766555433343
|
| >2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A | Back alignment and structure |
|---|
Probab=97.32 E-value=0.058 Score=55.93 Aligned_cols=73 Identities=11% Similarity=0.072 Sum_probs=52.2
Q ss_pred eeEEEEEcCCCcEEEEEEecCCCceeEEEEceecCCCCCCceEEEEccCCccccccccceEEEEEcCCCEEEEEE
Q 012852 371 LQVWVGPLSGHRLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQVDAHDCQMYIF 445 (455)
Q Consensus 371 ~~vw~~~l~dg~~avalfN~~~~~~~iti~l~~LGL~~~~~~~vrDlW~g~~~~g~~~~~l~~~L~pH~~~ll~l 445 (455)
.-+|.+...+...+|++.|.+.+++++++++...++..+ ..++|+.+++.......+.++++|+|++++|++-
T Consensus 393 ~~af~R~~~~~~~~vv~~N~~~~~~~~~l~~~~~~~~~g--~~~~dll~~~~~~~~~~g~~~~~l~~~~~~v~~~ 465 (478)
T 2guy_A 393 TIAMRKGTDGSQIVTILSNKGASGDSYTLSLSGAGYTAG--QQLTEVIGCTTVTVGSDGNVPVPMAGGLPRVLYP 465 (478)
T ss_dssp EEEEEESSTTSCEEEEEECSCTTCCCEEEEECCCCCCTT--CEEEETTTTEEEECCTTSCEEEEECTTCCEEEEE
T ss_pred EEEEEEEcCCCcEEEEEECCCCCCceEEEeccCcccCCC--CEEEEcccCcEEEECCCCEEEEEECCCcEEEEEe
Confidence 445666544456778899998877778887765566543 4679999987652123468899999999988873
|
| >1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A | Back alignment and structure |
|---|
Probab=97.25 E-value=0.0051 Score=63.10 Aligned_cols=63 Identities=10% Similarity=-0.002 Sum_probs=45.7
Q ss_pred eeEEEEEcCCCcEEEEEEecCCCceeEEEEceecCCCCCCceEEEEccCCccccccccceEEEEEcCCCEEEEE
Q 012852 371 LQVWVGPLSGHRLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQVDAHDCQMYI 444 (455)
Q Consensus 371 ~~vw~~~l~dg~~avalfN~~~~~~~iti~l~~LGL~~~~~~~vrDlW~g~~~~g~~~~~l~~~L~pH~~~ll~ 444 (455)
.-+|.+. + ..++++|.++.+.+++++ .+++.+ +.+|+.+++.. ....+.++++|+|+++++|+
T Consensus 358 v~af~R~--~--~~lVv~N~~~~~~~~~~~---~~l~~g---~~~d~l~~~~~-~~~~~~~~~~lpp~~~~vl~ 420 (422)
T 1ua7_A 358 IFMNQRG--S--HGVVLANAGSSSVSINTA---TKLPDG---RYDNKAGAGSF-QVNDGKLTGTINARSVAVLY 420 (422)
T ss_dssp EEEEEET--T--TEEEEEECSSSCEEEEEE---CCSCSE---EEECTTSSCEE-EEETTEEEEEECTTEEEEEC
T ss_pred EEEEEcC--C--cEEEEEeCCCCCeEEEEe---cccCCC---eeeeeecCceE-EeeCCEEEEEECCCceEEEe
Confidence 4456662 2 258899999887776664 467642 46999998765 33456889999999999985
|
| >1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A | Back alignment and structure |
|---|
Probab=97.22 E-value=0.01 Score=64.25 Aligned_cols=69 Identities=12% Similarity=0.015 Sum_probs=52.3
Q ss_pred eEEEEEcCCCcEEEEEEecCCCceeEEEEceecCCCCCCceEEEEccCCccccccccceEEEEEcCCCEEEEE
Q 012852 372 QVWVGPLSGHRLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQVDAHDCQMYI 444 (455)
Q Consensus 372 ~vw~~~l~dg~~avalfN~~~~~~~iti~l~~LGL~~~~~~~vrDlW~g~~~~g~~~~~l~~~L~pH~~~ll~ 444 (455)
-++.+... ++.+++++|.++++++++++...+|++.+ -.++++.+++.. ....+.++++|+|++++||+
T Consensus 568 ~a~~R~~~-~~~~lvv~N~~~~~~~~~l~~~~~~~~~~--~~~~~~l~~~~~-~~~~~~~~~~l~p~s~~vl~ 636 (637)
T 1ji1_A 568 YSYGRFDN-VNRIAVVLNNDSVSHTVNVPVWQLSMPNG--STVTDKITGHSY-TVQNGMVTVAVDGHYGAVLA 636 (637)
T ss_dssp EEEEEECS-SCEEEEEEECSSSCEEEEECGGGGTCCTT--CEEEETTTCCEE-ECBTTBEEEEECTTEEEEEE
T ss_pred EEEEEEcC-CCEEEEEEECCCCCEEEecCccccccCCC--ceEEEeccCceE-EecCCeEEEEECCCEEEEEE
Confidence 45666654 45789999999999888887666777642 367999988765 34456788999999999985
|
| >1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A | Back alignment and structure |
|---|
Probab=97.18 E-value=0.024 Score=60.65 Aligned_cols=132 Identities=18% Similarity=0.175 Sum_probs=82.8
Q ss_pred CHHHHHHHHHHHHHcCCcccCceEEEecCCcCCC---CCCCCCCcccCCCCCC--CCHHHHHHHHHhcCCeEEEEecCC-
Q 012852 106 SETIIKETADALVSTGLAELGYDHVNIDDCWSSP---LRDLKGQLVPDTITFP--SGIKALADYVHGKGLKLGIYSDAG- 179 (455)
Q Consensus 106 ~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~---~rd~~G~~~~d~~~FP--~Gl~~l~~~v~~~G~k~Glw~~pg- 179 (455)
|...|.+.++.+ +++|++.|.|=--.... +-+..+...+|+ +|. ..++.|++.+|++||++=|=+-+.
T Consensus 171 ~~~gi~~~LdyL-----k~LGvt~I~L~Pi~~~~~~~GYd~~dy~~id~-~~Gt~~dfk~lv~~~H~~Gi~VilD~V~NH 244 (585)
T 1wzl_A 171 DLKGVIDRLPYL-----EELGVTALYFTPIFASPSHHKYDTADYLAIDP-QFGDLPTFRRLVDEAHRRGIKIILDAVFNH 244 (585)
T ss_dssp CHHHHHHTHHHH-----HHHTCCEEEECCCEECSSSSCCSCSEEEEECT-TTCCHHHHHHHHHHHHTTTCEEEEEECCSB
T ss_pred CHHHHHHHhHHH-----HHcCCCEEEECCcccCCCCCCcCcccccccCc-ccCCHHHHHHHHHHHHHCCCEEEEEEcCCc
Confidence 667777778888 77899988775332221 111112234554 453 359999999999999986532110
Q ss_pred --------------------------------------cccc-----------CCCCcccccHHhHHHHHHhcCCcEEEe
Q 012852 180 --------------------------------------VFTC-----------QVRPGSLFHEKDDAPLFASWGVDYLKY 210 (455)
Q Consensus 180 --------------------------------------~~~c-----------~~~Pg~~~~~~~~~~~~~~wGidylK~ 210 (455)
...| ..+|.+++++...+..+.+.|||.+.+
T Consensus 245 ~~~~~~~f~~~~~~g~~s~y~~~y~~~~~~~~~~~~~~y~~~~~~~~~~pdln~~~~~vr~~l~~~~~~Wl~~gvDGfR~ 324 (585)
T 1wzl_A 245 AGDQFFAFRDVLQKGEQSRYKDWFFIEDFPVSKTSRTNYETFAVQVPAMPKLRTENPEVKEYLFDVARFWMEQGIDGWRL 324 (585)
T ss_dssp CCTTSHHHHHHHHHGGGCTTGGGBCBSSSSCCCSSCCSBCBSSSSCTTCBBBCTTSHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCccHHHHHHHhcCCCCCccCceEecCCCCCCCCCCCeeEcccCCCCCCeeCcCCHHHHHHHHHHHHHHHhCCCeEEEE
Confidence 0011 124556777777777666999999999
Q ss_pred ecCCCCCCCccchhHHHHHHHHhcCCCeeEeeCCCC
Q 012852 211 DNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWG 246 (455)
Q Consensus 211 D~~~~~~~~~~~~y~~m~~AL~~~G~~i~~~~c~~g 246 (455)
|....- +.+..+.+++++++..+++++-.-.|.
T Consensus 325 D~a~~~---~~~f~~~~~~~v~~~~p~~~~igE~~~ 357 (585)
T 1wzl_A 325 DVANEV---DHAFWREFRRLVKSLNPDALIVGEIWH 357 (585)
T ss_dssp TTGGGS---CHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred eccccC---CHHHHHHHHHHHHHHCCCEEEEEEecC
Confidence 975322 244557788888877776554433343
|
| >2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0063 Score=63.20 Aligned_cols=132 Identities=14% Similarity=0.167 Sum_probs=83.4
Q ss_pred CCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCC-----cccCCCCCC--CCHHHHHHHHHhcCCeEEEEe
Q 012852 104 NISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQ-----LVPDTITFP--SGIKALADYVHGKGLKLGIYS 176 (455)
Q Consensus 104 ~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~-----~~~d~~~FP--~Gl~~l~~~v~~~G~k~Glw~ 176 (455)
.=|-..|.+.++.+ +++|++.|.|=--+... . ..|. ..+|+ +|. +.++.|++.+|++||++=+=+
T Consensus 46 ~G~~~gi~~~LdyL-----~~LGv~~I~l~Pi~~~~-~-~~gY~~~dy~~idp-~~Gt~~df~~lv~~~h~~Gi~VilD~ 117 (475)
T 2z1k_A 46 GGTLWGVAEKLPYL-----LDLGVEAIYLNPVFAST-A-NHRYHTVDYFQVDP-ILGGNEALRHLLEVAHAHGVRVILDG 117 (475)
T ss_dssp CCCHHHHHHTHHHH-----HHHTCCEEEECCCEEES-S-TTCCSEEEEEEECG-GGTCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCHHHHHHHhHHH-----HHcCCCEEEECCCcCCC-C-CCCcCCCCcCccCc-ccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 44677888888888 77899988875433221 1 1232 23443 343 359999999999999986644
Q ss_pred cCC---------------------------------------cc-cc----------CCCCcccccHHhHHHHHHhcCCc
Q 012852 177 DAG---------------------------------------VF-TC----------QVRPGSLFHEKDDAPLFASWGVD 206 (455)
Q Consensus 177 ~pg---------------------------------------~~-~c----------~~~Pg~~~~~~~~~~~~~~wGid 206 (455)
-+. .. .| ..+|.+++++...++.+.+.|||
T Consensus 118 V~NH~~~~~~~f~~~~~~g~~s~y~~~y~~~~~~~~~~~~~~~y~~~~~~~~~pdln~~np~v~~~i~~~~~~w~~~gvD 197 (475)
T 2z1k_A 118 VFNHTGRGFFAFQHLMENGEQSPYRDWYHVKGFPLKAYTAHPNYEAWWGNPELPKLKVETPAVREYLLAVAEHWIRFGVD 197 (475)
T ss_dssp CCSBCCTTSHHHHHHHHHGGGCTTGGGBCBCSSSCCTTSSSCSBCBGGGCTTSBBBCTTSHHHHHHHHHHHHHHHHHTCC
T ss_pred ecccccCCCHHHHHHHhcCCCCCCcceeecCCCCCcCCCCCCCccccCCCCCcCccccCCHHHHHHHHHHHHHHHHCCCC
Confidence 221 00 00 12445666666667776799999
Q ss_pred EEEeecCCCCCCCccc-hhHHHHHHHHhcCCCeeEeeCCCC
Q 012852 207 YLKYDNCFNLGIEPKK-RYPPMRDALNETGCSIFYSLCEWG 246 (455)
Q Consensus 207 ylK~D~~~~~~~~~~~-~y~~m~~AL~~~G~~i~~~~c~~g 246 (455)
.+.+|....- +.+ ..+.+++++++..+++++-.-.|.
T Consensus 198 GfR~D~~~~~---~~~~~~~~~~~~~~~~~p~~~~igE~~~ 235 (475)
T 2z1k_A 198 GWRLDVPNEI---PDPTFWREFRQRVKGANPEAYIVGEIWE 235 (475)
T ss_dssp EEEESSGGGC---CCHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred EEeecccccC---CHHHHHHHHHHHHhhcCCCcEEEEEecC
Confidence 9999997543 223 556788888777666554433343
|
| >2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A | Back alignment and structure |
|---|
Probab=97.03 E-value=0.012 Score=61.42 Aligned_cols=128 Identities=16% Similarity=0.148 Sum_probs=81.6
Q ss_pred CCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCc-----ccCCCCCC--CCHHHHHHHHHhcCCeEEEEe
Q 012852 104 NISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQL-----VPDTITFP--SGIKALADYVHGKGLKLGIYS 176 (455)
Q Consensus 104 ~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~-----~~d~~~FP--~Gl~~l~~~v~~~G~k~Glw~ 176 (455)
.=|-..|.+.++.+ +++|++.|.|=--+... . ..|.. .+|+ +|. ..|+.|++.+|++||++=|=+
T Consensus 52 ~Gdl~gi~~~LdyL-----~~LGv~~I~L~Pi~~~~-~-~~GYd~~dy~~idp-~~Gt~~df~~Lv~~aH~~Gi~VilD~ 123 (488)
T 2wc7_A 52 GGDLWGIMEDLDYI-----QNLGINAIYFTPIFQSA-S-NHRYHTHDYYQVDP-MLGGNEAFKELLDAAHQRNIKVVLDG 123 (488)
T ss_dssp CCCHHHHHHTHHHH-----HHHTCCEEEESCCEEEC-T-TCTTSEEEEEEECG-GGTHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CcCHHHHHHhhHHH-----HHcCCCEEEECCCCCCC-C-CCCCCCcCccccCc-ccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 45677888888988 77899988875433221 1 12332 3443 443 359999999999999986543
Q ss_pred cCC-----------------------------------------cc-cc----------CCCCcccccHHhHHHHHHhcC
Q 012852 177 DAG-----------------------------------------VF-TC----------QVRPGSLFHEKDDAPLFASWG 204 (455)
Q Consensus 177 ~pg-----------------------------------------~~-~c----------~~~Pg~~~~~~~~~~~~~~wG 204 (455)
-+. .. .| ..+|.+++++...++.+.+.|
T Consensus 124 V~NH~s~~~~~f~~~~~~~~~s~y~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~pdln~~np~vr~~i~~~~~~Wl~~g 203 (488)
T 2wc7_A 124 VFNHSSRGFFFFHDVLENGPHSPWVNWFKIEGWPLSPYNGEFPANYVGWAGNRALPEFNHDNPEVREYIMEIAEYWLKFG 203 (488)
T ss_dssp CCSBCCSSSHHHHHHHHHGGGCTTGGGBCBCSSSCCSSCTTSCCCBCBGGGCTTSBBBCTTSHHHHHHHHHHHHHHHHHT
T ss_pred CCCcCCCcCHHHHHHHhcCCCCCCCCceeecCCCCCCCCCCCCCCccccCCCCCcCeeccCCHHHHHHHHHHHHHHHHCC
Confidence 210 00 01 124456666666777766999
Q ss_pred CcEEEeecCCCCCCCccchhHHHHHHHHhcCCCeeEe
Q 012852 205 VDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYS 241 (455)
Q Consensus 205 idylK~D~~~~~~~~~~~~y~~m~~AL~~~G~~i~~~ 241 (455)
||.+.+|....-.. .+..+.+++++++..+++++-
T Consensus 204 vDGfR~D~~~~i~~--~~~~~~~~~~~~~~~p~~~~v 238 (488)
T 2wc7_A 204 IDGWRLDVPFEIKT--PGFWQEFRDRTKAINPEAYIV 238 (488)
T ss_dssp CCEEEESSGGGCCC--TTHHHHHHHHHHHHCTTCEEE
T ss_pred CCEEEEecccccCh--HHHHHHHHHHHHhhCCCeEEE
Confidence 99999998754321 125567888887766665543
|
| >3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.052 Score=55.87 Aligned_cols=127 Identities=14% Similarity=0.056 Sum_probs=83.3
Q ss_pred CCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCC-----CCCc-----ccCCCCCC--CCHHHHHHHHHhcCCeE
Q 012852 105 ISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDL-----KGQL-----VPDTITFP--SGIKALADYVHGKGLKL 172 (455)
Q Consensus 105 i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~-----~G~~-----~~d~~~FP--~Gl~~l~~~v~~~G~k~ 172 (455)
=+-+.|.+.++.+ +++|+..|.|=--+.....+. .|.+ .+|+ +|- +.++.|++.+|++||++
T Consensus 27 G~~~~i~~~l~yl-----~~lG~~~i~l~Pi~~~~~~~~~~~~~~gY~~~dy~~i~~-~~Gt~~~~~~lv~~~h~~Gi~v 100 (449)
T 3dhu_A 27 GNFAGVTADLQRI-----KDLGTDILWLLPINPIGEVNRKGTLGSPYAIKDYRGINP-EYGTLADFKALTDRAHELGMKV 100 (449)
T ss_dssp CSHHHHHTTHHHH-----HHHTCSEEEECCCSCBCSTTCCTTTCCTTSBSCTTSCCG-GGCCHHHHHHHHHHHHHTTCEE
T ss_pred CCHHHHHHhHHHH-----HHcCCCEEEECCcccccccCCCCCCCCCcCcccccccCc-ccCCHHHHHHHHHHHHHCCCEE
Confidence 3567777778888 779999998865443211111 1222 3332 333 25999999999999999
Q ss_pred EEEecCCc----------------------ccc------------CCCCcccccHHhHHHHHHhcCCcEEEeecCCCCCC
Q 012852 173 GIYSDAGV----------------------FTC------------QVRPGSLFHEKDDAPLFASWGVDYLKYDNCFNLGI 218 (455)
Q Consensus 173 Glw~~pg~----------------------~~c------------~~~Pg~~~~~~~~~~~~~~wGidylK~D~~~~~~~ 218 (455)
=+-+-+.- ..| ..+|.+++++...++.+.+. ||.+.+|....-
T Consensus 101 i~D~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~dLn~~np~Vr~~l~~~l~~w~~~-vDGfRlDaa~~~-- 177 (449)
T 3dhu_A 101 MLDIVYNHTSPDSVLATEHPEWFYHDADGQLTNKVGDWSDVKDLDYGHHELWQYQIDTLLYWSQF-VDGYRCDVAPLV-- 177 (449)
T ss_dssp EEEECCSEECTTSHHHHHCGGGBCBCTTSCBCCSSTTCTTCEEBCTTSHHHHHHHHHHHHHHTTT-CSEEEETTGGGS--
T ss_pred EEEEccCcCcCccchhhcCccceEECCCCCcCCCCCCCCCCCccCCCCHHHHHHHHHHHHHHHHh-CCEEEEEChhhC--
Confidence 88775410 001 24567788888888888888 999999976433
Q ss_pred CccchhHHHHHHHHhcCCCeeEe
Q 012852 219 EPKKRYPPMRDALNETGCSIFYS 241 (455)
Q Consensus 219 ~~~~~y~~m~~AL~~~G~~i~~~ 241 (455)
+.+..+.+++++++..++.++-
T Consensus 178 -~~~f~~~~~~~~~~~~p~~~~~ 199 (449)
T 3dhu_A 178 -PLDFWLEARKQVNAKYPETLWL 199 (449)
T ss_dssp -CHHHHHHHHHHHHHHSTTCEEE
T ss_pred -CHHHHHHHHHHHHhhCCCeEEE
Confidence 2344567777887766665543
|
| >4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.016 Score=63.50 Aligned_cols=67 Identities=12% Similarity=0.055 Sum_probs=42.7
Q ss_pred eeEEEEEcCCCcEEEEEEecCCCceeEEEEceecCCCCCCceEEEEccCCccccccccceEEEEEcCCCEEEEEEEeC
Q 012852 371 LQVWVGPLSGHRLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQVDAHDCQMYIFTPR 448 (455)
Q Consensus 371 ~~vw~~~l~dg~~avalfN~~~~~~~iti~l~~LGL~~~~~~~vrDlW~g~~~~g~~~~~l~~~L~pH~~~ll~ltp~ 448 (455)
.-++.+... ++.+++++|.++++++++++.. . -..+|+.+++.. ...+.++++|+|+++++|+-.|.
T Consensus 628 v~af~R~~~-~~~~lVv~N~s~~~~~v~l~~~-----~---~~~~dllsg~~~--~~~g~~~l~L~p~~~~il~~~~~ 694 (696)
T 4aee_A 628 LLFIKRWIN-NEEIIFLLNVSSKDISVDLKKL-----G---KYSFDIYNEKNI--DQHVENNVLLRGYGFLILGSKPC 694 (696)
T ss_dssp EEEEEEEET-TEEEEEEEECSSSCEECCCC------------CCEETTTCCC----------CEECTTCEEEEESSCC
T ss_pred EEEEEEEcC-CCEEEEEEECCCCCEEEEccCC-----C---CeEEEcccCcee--ccCCeEEEEECCCEEEEEEeCCC
Confidence 456666654 4678999999998877665432 1 146899998875 24466789999999999986543
|
| >1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A* | Back alignment and structure |
|---|
Probab=96.63 E-value=0.29 Score=52.63 Aligned_cols=102 Identities=19% Similarity=0.242 Sum_probs=64.9
Q ss_pred CHHHHHHHH-HHHHHcCCcccCceEEEecCCcCCCCCCCCC-----CcccCCCCC--CCCHHHHHHHHHhcCCeEEEEec
Q 012852 106 SETIIKETA-DALVSTGLAELGYDHVNIDDCWSSPLRDLKG-----QLVPDTITF--PSGIKALADYVHGKGLKLGIYSD 177 (455)
Q Consensus 106 ~e~~i~~~a-d~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G-----~~~~d~~~F--P~Gl~~l~~~v~~~G~k~Glw~~ 177 (455)
|...|.+.+ +.+ +++|++.|.|---+.....+..| ...+++ +| ++.|+.|++.+|++||++=|.+-
T Consensus 153 ~~~~i~~~ll~yl-----~~lGv~~i~l~Pi~~~~~~~~~GY~~~~y~~~~~-~~Gt~~~~~~lv~~~H~~Gi~VilD~V 226 (617)
T 1m7x_A 153 SYRELADQLVPYA-----KWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTR-RFGTRDDFRYFIDAAHAAGLNVILDWV 226 (617)
T ss_dssp CHHHHHHHHHHHH-----HHTTCSEEEESCCEECSCGGGTTSSCSEEEEECG-GGSCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHH-----HHcCCCEEEecccccCCCCCCCCcccccCCccCc-cCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 556666654 777 78999999885444332111112 223443 33 23599999999999999999886
Q ss_pred CCcc-------------c--------------------cCCCCcccccHHhHHHHHH-hcCCcEEEeecC
Q 012852 178 AGVF-------------T--------------------CQVRPGSLFHEKDDAPLFA-SWGVDYLKYDNC 213 (455)
Q Consensus 178 pg~~-------------~--------------------c~~~Pg~~~~~~~~~~~~~-~wGidylK~D~~ 213 (455)
+.-. . ...+|.+++++...+..+. ++|||.+.+|..
T Consensus 227 ~NH~~~~~~~~~~~d~~~~y~~~~~~~g~~~~w~~~~ln~~~p~v~~~i~~~~~~W~~~~gvDGfR~D~~ 296 (617)
T 1m7x_A 227 PGHFPTDDFALAEFDGTNLYEHSDPREGYHQDWNTLIYNYGRREVSNFLVGNALYWIERFGIDALRVDAV 296 (617)
T ss_dssp TTSCCCSTTSSTTGGGSCSSBCC-----------CCCBCTTSHHHHHHHHHHHHHHHHHSCCCEEEECCS
T ss_pred cCcccCccchhhhcCCCccccccCcccCCcCCCCCceecCCCHHHHHHHHHHHHHHHHHhCcCEEEEcch
Confidence 5210 0 0134556666666666554 589999999974
|
| >3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=96.46 E-value=0.47 Score=52.13 Aligned_cols=103 Identities=20% Similarity=0.288 Sum_probs=64.7
Q ss_pred CCHHHHHHHH-HHHHHcCCcccCceEEEecCCcCCC-----CCCCCCCcccCCCCC--CCCHHHHHHHHHhcCCeEEEEe
Q 012852 105 ISETIIKETA-DALVSTGLAELGYDHVNIDDCWSSP-----LRDLKGQLVPDTITF--PSGIKALADYVHGKGLKLGIYS 176 (455)
Q Consensus 105 i~e~~i~~~a-d~~~~~gl~~~G~~~~~iDDGW~~~-----~rd~~G~~~~d~~~F--P~Gl~~l~~~v~~~G~k~Glw~ 176 (455)
-|-..+.+.+ +.+ +++|++.|.|=--.... +.+..+...+++ +| |+.++.||+.+|++||++=+.+
T Consensus 260 G~~~~l~~~l~~yL-----k~lG~t~I~L~Pi~e~~~~~~wGY~~~~y~a~~~-~yGt~~dfk~lV~~~H~~GI~VilD~ 333 (722)
T 3k1d_A 260 LSYRQLARELTDYI-----VDQGFTHVELLPVAEHPFAGSWGYQVTSYYAPTS-RFGTPDDFRALVDALHQAGIGVIVDW 333 (722)
T ss_dssp CCHHHHHHHHHHHH-----HHHTCSEEEESCCEECSCGGGTTCSCSEEEEECG-GGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCHHHHHHHHHHHH-----HHcCCCeEEECCcccCCCCCCCCCCcccCcCccc-cCCCHHHHHHHHHHHHHcCCEEEEEE
Confidence 4566666655 777 67888888763322211 111112234442 44 3469999999999999999998
Q ss_pred cCCcc-------------c--------------------cCCCCcccccHHhHHHHHH-hcCCcEEEeecC
Q 012852 177 DAGVF-------------T--------------------CQVRPGSLFHEKDDAPLFA-SWGVDYLKYDNC 213 (455)
Q Consensus 177 ~pg~~-------------~--------------------c~~~Pg~~~~~~~~~~~~~-~wGidylK~D~~ 213 (455)
.+.-. . ...+|.+++++...+..+. ++|||.+.+|..
T Consensus 334 V~NH~~~~~~~~~~fdg~~~y~~~d~~~~~~~~Wg~~~ln~~~p~Vr~~l~~~~~~Wl~~~gvDGfR~Dav 404 (722)
T 3k1d_A 334 VPAHFPKDAWALGRFDGTPLYEHSDPKRGEQLDWGTYVFDFGRPEVRNFLVANALYWLQEFHIDGLRVDAV 404 (722)
T ss_dssp CTTCCCCCTTTTTTTTSSCCSBCCCCCSSSTTCCCCCCBCTTSHHHHHHHHHHHHHHHHHSCCCEEEECCT
T ss_pred EeeccCCccchhhcCCCCcccccCCcccCccCCCCCeeecCCCHHHHHHHHHHHHHHHHHhCCCEEEEcch
Confidence 65210 0 0234566677766666554 589999999964
|
| >4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm} | Back alignment and structure |
|---|
Probab=96.20 E-value=0.45 Score=49.62 Aligned_cols=103 Identities=14% Similarity=0.050 Sum_probs=67.0
Q ss_pred CHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCC-----cccCCCCCC--CCHHHHHHHHHhcCCeEEEEecC
Q 012852 106 SETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQ-----LVPDTITFP--SGIKALADYVHGKGLKLGIYSDA 178 (455)
Q Consensus 106 ~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~-----~~~d~~~FP--~Gl~~l~~~v~~~G~k~Glw~~p 178 (455)
|-..|.+.++.+ +++|++.|-|==-.... ....|. ..+|| +|- +.++.|++.+|++||++-|=+-+
T Consensus 30 dl~Gi~~kLdYL-----k~LGvt~I~L~Pi~~~~-~~~~GYd~~dy~~vdp-~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~ 102 (549)
T 4aie_A 30 DLQGIISRLDYL-----EKLGIDAIWLSPVYQSP-GVDNGYDISDYEAIDP-QYGTMADMDELISKAKEHHIKIVMDLVV 102 (549)
T ss_dssp CHHHHHTTHHHH-----HHHTCSEEEECCCEECC-CTTTTSSCSEEEEECT-TTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHhhHHH-----HHCCCCEEEeCCCcCCC-CCCCCcCccCCCCcCc-ccCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 567777778888 67888888763222211 111232 24554 453 24999999999999998652211
Q ss_pred ------------------------------Cc------------------------------ccc-----CCCCcccccH
Q 012852 179 ------------------------------GV------------------------------FTC-----QVRPGSLFHE 193 (455)
Q Consensus 179 ------------------------------g~------------------------------~~c-----~~~Pg~~~~~ 193 (455)
.. ..| ..+|.++.++
T Consensus 103 NHts~~~~wf~~~~~~~~~~~~~~y~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~dln~~np~v~~~i 182 (549)
T 4aie_A 103 NHTSDQHKWFVEAKKGKDNQYRDYYIWRDPVDEHEPNDLKSAFSGSAWKYDERSGQYYLHFFADQQPDLNWQNTELRQKI 182 (549)
T ss_dssp SBCCTTSHHHHHHTTCTTSTTGGGBCEECCBTTBCSSCCBCTTSSBSEEEETTTTEEEECSSCTTSCBBCTTCHHHHHHH
T ss_pred cCCcCCcchhhhhhhcccccccccccccCCcccCCCCCcccccCCCcccccccCCceEecccCCCCCccccCCHHHHHHH
Confidence 00 000 2356677788
Q ss_pred HhHHHHHHhcCCcEEEeecCCC
Q 012852 194 KDDAPLFASWGVDYLKYDNCFN 215 (455)
Q Consensus 194 ~~~~~~~~~wGidylK~D~~~~ 215 (455)
...+..+.+.|||.+.+|....
T Consensus 183 ~~~~~~W~e~gvDGfRlD~~~~ 204 (549)
T 4aie_A 183 YNMMNFWLDKGIGGFRMDVIEL 204 (549)
T ss_dssp HHHHHHHHHTTCCEEEETTGGG
T ss_pred HHHHHHHHHhcCCceeEecHHh
Confidence 8888888999999999998644
|
| >1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ... | Back alignment and structure |
|---|
Probab=96.16 E-value=0.74 Score=50.05 Aligned_cols=124 Identities=15% Similarity=0.156 Sum_probs=74.6
Q ss_pred cCCCHHHHHHHHH--HHHHcCCcccCceEEEecCCcCCCC----------CCCCCCc-----ccCCCCCC--CCHHHHHH
Q 012852 103 CNISETIIKETAD--ALVSTGLAELGYDHVNIDDCWSSPL----------RDLKGQL-----VPDTITFP--SGIKALAD 163 (455)
Q Consensus 103 ~~i~e~~i~~~ad--~~~~~gl~~~G~~~~~iDDGW~~~~----------rd~~G~~-----~~d~~~FP--~Gl~~l~~ 163 (455)
+.=+-+.|.+.++ .+ +++|++.|.|=--+.... ....|.+ .+|+ +|- +.|+.|++
T Consensus 50 ~gGdl~gi~~kLd~~yL-----k~LGvt~IwL~Pi~~~~~~~~~~~g~~~~~~~GYd~~dy~~idp-~~Gt~~dfk~Lv~ 123 (686)
T 1d3c_A 50 CGGDWQGIINKINDGYL-----TGMGVTAIWISQPVENIYSIINYSGVNNTAYHGYWARDFKKTNP-AYGTIADFQNLIA 123 (686)
T ss_dssp CCCCHHHHHHHHHTTTT-----GGGTCCEEEECCCEEECCCCEESSSCEECCTTSCSEEEEEEECT-TTCCHHHHHHHHH
T ss_pred cCcCHHHHHHhcCHHHH-----HhcCCCEEEeCCcccCCcccccccCccCCCCCCCCcccccccCc-ccCCHHHHHHHHH
Confidence 3446677777666 66 889999888743221100 0112333 3553 453 25999999
Q ss_pred HHHhcCCeEEEEecC----------------------------------Ccc--cc----------------------CC
Q 012852 164 YVHGKGLKLGIYSDA----------------------------------GVF--TC----------------------QV 185 (455)
Q Consensus 164 ~v~~~G~k~Glw~~p----------------------------------g~~--~c----------------------~~ 185 (455)
.+|++||++=|=+-+ ... .| ..
T Consensus 124 ~aH~~GI~VilD~V~NHts~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~y~~~~~~pDLn~~ 203 (686)
T 1d3c_A 124 AAHAKNIKVIIDFAPNHTSPASSDQPSFAENGRLYDNGTLLGGYTNDTQNLFHHNGGTDFSTTENGIYKNLYDLADLNHN 203 (686)
T ss_dssp HHHHTTCEEEEEECTTEEEECCSSCTTSTTTTCEEETTEEEECSTTCTTCCBCCSCBCCSSSHHHHHHSBBTTEEEBCTT
T ss_pred HHHHCCCEEEEEeCcCccccccccccchhhcCccccCCcccccCCCCccCceecCCCCCcCCCccccccCcCCCCCcccC
Confidence 999999997542111 000 00 13
Q ss_pred CCcccccHHhHHHHHHhcCCcEEEeecCCCCCCCccchhHHHHHHHHhcC
Q 012852 186 RPGSLFHEKDDAPLFASWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETG 235 (455)
Q Consensus 186 ~Pg~~~~~~~~~~~~~~wGidylK~D~~~~~~~~~~~~y~~m~~AL~~~G 235 (455)
+|.+++++...++.+.+.|||.+.+|....-. .+..+.+++++++..
T Consensus 204 np~Vr~~i~~~l~~Wl~~GVDGfRlDa~~~i~---~~f~~~~~~~v~~~~ 250 (686)
T 1d3c_A 204 NSTVDVYLKDAIKMWLDLGIDGIRMNAVKHMP---FGWQKSFMAAVNNYK 250 (686)
T ss_dssp SHHHHHHHHHHHHHHHHTTCCEEEETTGGGSC---HHHHHHHHHHHHTTS
T ss_pred CHHHHHHHHHHHHHHHhCCCCEEEEeccccCC---HHHHHHHHHHHHhcC
Confidence 45666777777777778999999999764431 233456777776553
|
| >1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A* | Back alignment and structure |
|---|
Probab=96.16 E-value=0.047 Score=56.78 Aligned_cols=68 Identities=10% Similarity=0.065 Sum_probs=43.5
Q ss_pred eeEEEEEcCCC----cEEEEEEecCCCceeEEEEceecCCCCCCceEEEEccCCc--cccccccceEEEEEcCCCEEEEE
Q 012852 371 LQVWVGPLSGH----RLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHK--QVTGDAVSSFGAQVDAHDCQMYI 444 (455)
Q Consensus 371 ~~vw~~~l~dg----~~avalfN~~~~~~~iti~l~~LGL~~~~~~~vrDlW~g~--~~~g~~~~~l~~~L~pH~~~ll~ 444 (455)
.-+|.+...++ ..+|+++|.++++++++++.. +.. -.++|+.++. .+.....+.++++|+|.+++||+
T Consensus 410 ~~a~~R~~~~~~~~~~~~vv~~N~~~~~~~~~~~~~---~~~---~~~~d~l~~~~~~~~~~~~g~~~~~l~~~s~~v~~ 483 (485)
T 1wpc_A 410 IIGWTREGNTAHPNSGLATIMSDGAGGSKWMFVGRN---KAG---QVWSDITGNRTGTVTINADGWGNFSVNGGSVSIWV 483 (485)
T ss_dssp EEEEEECCCTTSTTCCEEEEEESSSCEEEEEECCGG---GTT---CEEEETTSSSCSEEECCTTSEEEEEECTTEEEEEE
T ss_pred EEEEEEECCCCCCCCCEEEEEECCCCCcEEEEecCC---CCC---ceEEeccCCCCceEEECCCcEEEEEECCCeEEEEE
Confidence 45666665443 477788999877655544321 122 3679999864 22111346789999999999986
|
| >1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=96.04 E-value=1.6 Score=47.36 Aligned_cols=124 Identities=19% Similarity=0.210 Sum_probs=75.5
Q ss_pred cCCCHHHHHHHHH--HHHHcCCcccCceEEEecCCcCCC---------CCCCCCCc-----ccCCCCCCC--CHHHHHHH
Q 012852 103 CNISETIIKETAD--ALVSTGLAELGYDHVNIDDCWSSP---------LRDLKGQL-----VPDTITFPS--GIKALADY 164 (455)
Q Consensus 103 ~~i~e~~i~~~ad--~~~~~gl~~~G~~~~~iDDGW~~~---------~rd~~G~~-----~~d~~~FP~--Gl~~l~~~ 164 (455)
+.=+-..|.+.++ .+ +++|++.|.|=--.... .....|.+ .+|+ +|-. .|+.|++.
T Consensus 47 ~gGdl~gi~~kLd~~yL-----k~LGv~aIwL~Pi~~~~~~~~~~~~g~~~~~GY~~~Dy~~idp-~~Gt~~df~~Lv~~ 120 (680)
T 1cyg_A 47 CGGDWQGIINKINDGYL-----TDMGVTAIWISQPVENVFSVMNDASGSASYHGYWARDFKKPNP-FFGTLSDFQRLVDA 120 (680)
T ss_dssp CCCCHHHHHHHHHTSTT-----TTTTCCEEEECCCEEECCCCCSSSSCCCSTTSCSEEEEEEECT-TTCCHHHHHHHHHH
T ss_pred cCcCHHHHHhhcCHHHH-----HhCCCCEEEeCccccCccccccccCCCCCCCCcCchhccccCc-ccCCHHHHHHHHHH
Confidence 4456777777777 66 88999988864322110 00113443 3453 5642 48999999
Q ss_pred HHhcCCeEEEEecC----------------------------------Ccc---------------cc---------CCC
Q 012852 165 VHGKGLKLGIYSDA----------------------------------GVF---------------TC---------QVR 186 (455)
Q Consensus 165 v~~~G~k~Glw~~p----------------------------------g~~---------------~c---------~~~ 186 (455)
+|++|||+=|=+-+ ... .| ..+
T Consensus 121 aH~~GIkVilD~V~NHts~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~y~~~~~~pDLn~~n 200 (680)
T 1cyg_A 121 AHAKGIKVIIDFAPNHTSPASETNPSYMENGRLYDNGTLLGGYTNDANMYFHHNGGTTFSSLEDGIYRNLFDLADLNHQN 200 (680)
T ss_dssp HHHTTCEEEEEECTTEEEECCSSCTTSTTTTCEEETTEEEECSTTCTTCCBCCSCBCCCSSHHHHHSSBSTTEEEBCTTS
T ss_pred HHHCCCEEEEEeCCCCCCcccccCcchhhcCccccCcccccccCCCchhceecCCCCCcCCCccccccCcCCCCccccCC
Confidence 99999997542211 000 00 134
Q ss_pred CcccccHHhHHHHHHhcCCcEEEeecCCCCCCCccchhHHHHHHHHhcC
Q 012852 187 PGSLFHEKDDAPLFASWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETG 235 (455)
Q Consensus 187 Pg~~~~~~~~~~~~~~wGidylK~D~~~~~~~~~~~~y~~m~~AL~~~G 235 (455)
|.+++++...++.+.+.|||.+.+|...+-. .+..+.+++++++..
T Consensus 201 p~Vr~~i~~~~~~Wl~~GVDGfRlDa~~~i~---~~f~~~~~~~v~~~~ 246 (680)
T 1cyg_A 201 PVIDRYLKDAVKMWIDMGIDGIRMDAVKHMP---FGWQKSLMDEIDNYR 246 (680)
T ss_dssp HHHHHHHHHHHHHHHTTTCCEEEESCGGGSC---SHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEeccccCC---HHHHHHHHHHHhhcC
Confidence 5667777777777778999999999865432 223356667766543
|
| >1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A* | Back alignment and structure |
|---|
Probab=96.01 E-value=0.65 Score=50.48 Aligned_cols=126 Identities=16% Similarity=0.130 Sum_probs=75.7
Q ss_pred CcCCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCC-------CCCCCCCc-----ccCCCCCCC--CHHHHHHHHHh
Q 012852 102 ACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSP-------LRDLKGQL-----VPDTITFPS--GIKALADYVHG 167 (455)
Q Consensus 102 ~~~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~-------~rd~~G~~-----~~d~~~FP~--Gl~~l~~~v~~ 167 (455)
++.=+-+.|.+.++.+ +++|++.|.|=--+... .....|.+ .+|+ +|-. .|+.|++.+|+
T Consensus 46 ~~gGdl~gi~~kLdyL-----k~LGv~aIwL~Pi~~~~~~~~~~g~~~~~GYd~~Dy~~idp-~~Gt~~df~~Lv~~aH~ 119 (686)
T 1qho_A 46 YWGGDLEGVRQKLPYL-----KQLGVTTIWLSPVLDNLDTLAGTDNTGYHGYWTRDFKQIEE-HFGNWTTFDTLVNDAHQ 119 (686)
T ss_dssp BCCCCHHHHHHTHHHH-----HHHTCCEEEECCCEEECSSCSSTTCCCTTSCSEEEEEEECT-TTCCHHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHhhHHH-----HhcCCCEEEECccccCCcccccCCCCCcCCcCcccccccCc-ccCCHHHHHHHHHHHHH
Confidence 3456778888888988 67888888763222110 00112433 3453 5542 48999999999
Q ss_pred cCCeEEEEecC-----------------------------------Ccc-------------------------cc----
Q 012852 168 KGLKLGIYSDA-----------------------------------GVF-------------------------TC---- 183 (455)
Q Consensus 168 ~G~k~Glw~~p-----------------------------------g~~-------------------------~c---- 183 (455)
+|||+=|=+-+ ... .+
T Consensus 120 ~GikVilD~V~NHts~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~f~~~~~i~~w~~~~~~~y~~~~~~~~~~~pDL 199 (686)
T 1qho_A 120 NGIKVIVDFVPNHSTPFKANDSTFAEGGALYNNGTYMGNYFDDATKGYFHHNGDISNWDDRYEAQWKNFTDPAGFSLADL 199 (686)
T ss_dssp TTCEEEEEECTTEEEEEBTTBTTSTTTTCEEETTEEEECSSSCTTTCCBCCSCBCSCTTCHHHHHHSBCEETTTEEEEEB
T ss_pred CCCEEEEEeccccccccccccccccccCccccCCcccccCCCCcccCeeecCCCcCcCCCCcccceeecccCCcCCCCcc
Confidence 99996542211 000 00
Q ss_pred -CCCCcccccHHhHHHHHHhcCCcEEEeecCCCCCCCccchhHHHHHHHHhcCC
Q 012852 184 -QVRPGSLFHEKDDAPLFASWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGC 236 (455)
Q Consensus 184 -~~~Pg~~~~~~~~~~~~~~wGidylK~D~~~~~~~~~~~~y~~m~~AL~~~G~ 236 (455)
..+|.+++++...++.+.+.|||.+.+|...+-. .+..+.+++++++...
T Consensus 200 n~~np~Vr~~l~~~~~~Wl~~GVDGfRlDa~~~i~---~~f~~~~~~~v~~~~~ 250 (686)
T 1qho_A 200 SQENGTIAQYLTDAAVQLVAHGADGLRIDAVKHFN---SGFSKSLADKLYQKKD 250 (686)
T ss_dssp CTTSHHHHHHHHHHHHHHHHTTCCEEEETTGGGSC---HHHHHHHHHHHHHHCC
T ss_pred ccCCHHHHHHHHHHHHHHHhcCCCEEEEeccccCC---HHHHHHHHHHHHhcCC
Confidence 1234555666666777777999999999865431 2334567777765543
|
| >3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A* | Back alignment and structure |
|---|
Probab=95.90 E-value=0.18 Score=56.60 Aligned_cols=87 Identities=11% Similarity=0.085 Sum_probs=58.5
Q ss_pred CHHHHHHHHHhcCCeEEEEecCC--------------ccc-------------c----CCCCcccccHHhHHHHHH-hcC
Q 012852 157 GIKALADYVHGKGLKLGIYSDAG--------------VFT-------------C----QVRPGSLFHEKDDAPLFA-SWG 204 (455)
Q Consensus 157 Gl~~l~~~v~~~G~k~Glw~~pg--------------~~~-------------c----~~~Pg~~~~~~~~~~~~~-~wG 204 (455)
.|+.||+.+|++||++=|-+.+. .+. | ..+|.+++++...+..+. ++|
T Consensus 371 efk~lV~~~H~~GI~VILDvV~NH~a~~~~~~~~~p~yy~~~~~dg~~~~~~~g~~ln~~~p~Vr~~i~d~l~~Wv~e~g 450 (877)
T 3faw_A 371 ELKQLIHDIHKRGMGVILDVVYNHTAKTYLFEDIEPNYYHFMNEDGSPRESFGGGRLGTTHAMSRRVLVDSIKYLTSEFK 450 (877)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTTCCSCTHHHHTTSTTTSBCBCTTSCBCEETTEECBCTTSHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCCEEEEEEeeccccCccccccCCCceeeeeCCCCCeeccCCCcccccCCHHHHHHHHHHHHHHHHHcC
Confidence 49999999999999998877542 000 0 235666777776677666 599
Q ss_pred CcEEEeecCCCCCCCccchhHHHHHHHHhcCCCeeEeeCCCC
Q 012852 205 VDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWG 246 (455)
Q Consensus 205 idylK~D~~~~~~~~~~~~y~~m~~AL~~~G~~i~~~~c~~g 246 (455)
||.+.+|..... +......+..++++..+++++-.-.|.
T Consensus 451 VDGFRfD~a~~~---~~~~~~~~~~~~~~~~P~~~ligE~Wd 489 (877)
T 3faw_A 451 VDGFRFDMMGDH---DAAAIELAYKEAKAINPNMIMIGEGWR 489 (877)
T ss_dssp CCEEEETTGGGS---BHHHHHHHHHHHHHHCTTCEEEECCCS
T ss_pred CcEEEEecCCcC---CHHHHHHHHHHHHhhCCCcEEEEcccc
Confidence 999999987432 233445566666666666665544454
|
| >3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A | Back alignment and structure |
|---|
Probab=95.69 E-value=1.8 Score=47.02 Aligned_cols=77 Identities=8% Similarity=0.110 Sum_probs=44.3
Q ss_pred eeEEEEEcCCCcEEEEEEecCCCceeEEEEceecCCCCCCceEEEEcc----CCccccccccce-EEEEEcCCCEEEEEE
Q 012852 371 LQVWVGPLSGHRLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLW----QHKQVTGDAVSS-FGAQVDAHDCQMYIF 445 (455)
Q Consensus 371 ~~vw~~~l~dg~~avalfN~~~~~~~iti~l~~LGL~~~~~~~vrDlW----~g~~~~g~~~~~-l~~~L~pH~~~ll~l 445 (455)
.-++.+... ++.+++++|.+.++ ++++..-..+++.+ ..+|+. +++.......+. .+++|+|+++++|++
T Consensus 418 v~af~R~~~-~~~~lV~~N~~~~~-~~~~~~~~~~l~~g---~~~d~l~~ll~~~~~~v~~~g~~~~~~l~p~~~~V~~~ 492 (683)
T 3bmv_A 418 VYIYERKFG-NNVALVAINRNLST-SYNITGLYTALPAG---TYTDVLGGLLNGNSISVASDGSVTPFTLSAGEVAVWQY 492 (683)
T ss_dssp EEEEEEEET-TEEEEEEEECCSSC-CEEECSCBCSSCSE---EECCTTTTTTSCCCEEECTTSBBCCEEECTTCEEEEEE
T ss_pred EEEEEEEcC-CeEEEEEEECCCCC-ceEeecccccCCCC---chhhhhhccccCCeEEEcCCCcEEEEEECCCcEEEEEE
Confidence 556677653 46789999999765 45543222344431 234433 333321011233 468999999999998
Q ss_pred EeCCccC
Q 012852 446 TPRTVTR 452 (455)
Q Consensus 446 tp~~~~~ 452 (455)
.+....|
T Consensus 493 ~~~~~~p 499 (683)
T 3bmv_A 493 VSSSNSP 499 (683)
T ss_dssp CCSCCCC
T ss_pred cCCCCCC
Confidence 7544433
|
| >3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A | Back alignment and structure |
|---|
Probab=95.55 E-value=0.6 Score=48.32 Aligned_cols=68 Identities=10% Similarity=0.048 Sum_probs=43.0
Q ss_pred eeEEEEEcCCC----cEEEEEEecCCCceeEEEEceecCCCCCCceEEEEccCCc--cccccccceEEEEEcCCCEEEEE
Q 012852 371 LQVWVGPLSGH----RLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHK--QVTGDAVSSFGAQVDAHDCQMYI 444 (455)
Q Consensus 371 ~~vw~~~l~dg----~~avalfN~~~~~~~iti~l~~LGL~~~~~~~vrDlW~g~--~~~g~~~~~l~~~L~pH~~~ll~ 444 (455)
.-+|.+...++ ..+|++.|.++.+++++++. .+.. -..+|+.++. .+.....+.++++|+|++++||+
T Consensus 408 ~~af~R~~~~~~~~~~~~vvi~N~~~~~~~~~~~~---~~~~---~~~~d~l~~~~~~~~v~~~g~~~~~l~~~s~~v~~ 481 (483)
T 3bh4_A 408 VIGWTREGDSSAAKSGLAALITDGPGGSKRMYAGL---KNAG---ETWYDITGNRSDTVKIGSDGWGEFHVNDGSVSIYV 481 (483)
T ss_dssp EEEEEECCCTTSTTCCEEEEEESSCCEEEEEECCG---GGTT---CEEEETTSSCCCEEECCTTSEEEEEECTTCEEEEE
T ss_pred EEEEEEECCCCCCCCCEEEEEECCCCCcEEEEecC---cCCC---CeEEeccCCCCceEEECCCCeEEEEECCCeEEEEE
Confidence 45666665443 46777789887665554432 1222 3579999863 22111346789999999999986
|
| >1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=95.46 E-value=0.87 Score=47.65 Aligned_cols=71 Identities=10% Similarity=0.007 Sum_probs=45.1
Q ss_pred eeEEEEEcCCC----cEEEEEEecCCCceeEEEEceecCCCCCCceEEEEccCCcc--ccccccceEEEEEcCCCEEEEE
Q 012852 371 LQVWVGPLSGH----RLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQ--VTGDAVSSFGAQVDAHDCQMYI 444 (455)
Q Consensus 371 ~~vw~~~l~dg----~~avalfN~~~~~~~iti~l~~LGL~~~~~~~vrDlW~g~~--~~g~~~~~l~~~L~pH~~~ll~ 444 (455)
.-+|.+...++ ..+|++.|.++.+++++++.. +.. -..+|+.++.. +.....|.++++|+|.+++||+
T Consensus 408 ~~af~R~~~~~~~~~~~vvvi~N~~~~~~~~~~~~~---~~~---~~~~dll~~~~~~~~~~~~G~~~~~l~~~s~~v~~ 481 (515)
T 1hvx_A 408 IIGWTREGVTEKPGSGLAALITDGPGGSKWMYVGKQ---HAG---KVFYDLTGNRSDTVTINSDGWGEFKVNGGSVSVWV 481 (515)
T ss_dssp EEEEEECCBTTBTTCCEEEEEESSSCEEEEEECCGG---GTT---CEEEETTSSCCCEEECCTTSEEEEEECTTCEEEEE
T ss_pred EEEEEEECCCCCCCCCEEEEEECCCCCcEEEEecCc---CCC---CeEEECcCCCCceEEECCCCeEEEEECCCeEEEEE
Confidence 45677765443 467777898876655544311 222 36799998632 2112357789999999999998
Q ss_pred EEe
Q 012852 445 FTP 447 (455)
Q Consensus 445 ltp 447 (455)
...
T Consensus 482 ~~~ 484 (515)
T 1hvx_A 482 PRK 484 (515)
T ss_dssp EC-
T ss_pred ECC
Confidence 754
|
| >3ues_A Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydrolase inhibitor complex; HET: DFU; 1.60A {Bifidobacterium longum subsp} PDB: 3mo4_A* 3uet_A* | Back alignment and structure |
|---|
Probab=93.41 E-value=0.91 Score=47.43 Aligned_cols=131 Identities=12% Similarity=0.089 Sum_probs=76.5
Q ss_pred CCCHHHHHHHHHHHHHcCCcccCceEEEec----CCcCCCCCCCCCCcccCCCCCC----CCHHHHHHHHHhcCCeEEEE
Q 012852 104 NISETIIKETADALVSTGLAELGYDHVNID----DCWSSPLRDLKGQLVPDTITFP----SGIKALADYVHGKGLKLGIY 175 (455)
Q Consensus 104 ~i~e~~i~~~ad~~~~~gl~~~G~~~~~iD----DGW~~~~rd~~G~~~~d~~~FP----~Gl~~l~~~v~~~G~k~Glw 175 (455)
.+|.+...+.++ ++|.+|++|= ||+.-- .....++.+....|- +=+++|++.+|+.||+||+|
T Consensus 61 ~fd~~~W~~~~k--------~aGakyvvlt~kHHdGF~lw-~S~~t~~~v~~~p~~~~krDiv~el~~A~r~~gl~~g~Y 131 (478)
T 3ues_A 61 NVDVDQWMDALV--------AGGMAGVILTCKHHDGFCLW-PSRLTRHTVASSPWREGKGDLVREVSESARRHGLKFGVY 131 (478)
T ss_dssp SCCHHHHHHHHH--------HTTCSEEEEEEECTTCCBSS-CCTTCSCBGGGSSGGGGTCCHHHHHHHHHHHTTCEEEEE
T ss_pred cCCHHHHHHHHH--------HcCCCEEEEeEEecCCcccc-CCCCCCcccccCCccCCCCCHHHHHHHHHHHcCCeEEEE
Confidence 456666555444 5688899883 344321 112234433322221 22799999999999999999
Q ss_pred ecCCccccCCC---CcccccH-HhHHHHHHhcC-CcEEEeecCCCCCCC---ccchhHHHHHHHHhcCCCeeEeeC
Q 012852 176 SDAGVFTCQVR---PGSLFHE-KDDAPLFASWG-VDYLKYDNCFNLGIE---PKKRYPPMRDALNETGCSIFYSLC 243 (455)
Q Consensus 176 ~~pg~~~c~~~---Pg~~~~~-~~~~~~~~~wG-idylK~D~~~~~~~~---~~~~y~~m~~AL~~~G~~i~~~~c 243 (455)
+.+-....+.+ +.-.+|+ .++.+++..+| ++.|=+|.-...+.. ....+..+.+.+++..++++++.|
T Consensus 132 ~S~~d~~~~~y~~~~~y~~~~~~ql~EL~~~Yg~~~~~W~Dg~~~~~~~~~~~~~~~~~~~~~i~~~qP~~vi~~~ 207 (478)
T 3ues_A 132 LSPWDRTEESYGKGKAYDDFYVGQLTELLTQYGPIFSVWLDGANGEGKNGKTQYYDWDRYYNVIRSLQPDAVISVC 207 (478)
T ss_dssp ECSCCSSCTTTTSSHHHHHHHHHHHHHHHHSSSCCSEEEECCCCCCCTTSCCCCCCHHHHHHHHHHHCTTSEEEES
T ss_pred eChHHhCCcccCchHHHHHHHHHHHHHHHhcCCcceEEEeeCCCCCCCccchhhhhHHHHHHHHHHHCcCEEEECC
Confidence 98742211111 1112233 45566778888 578999985432111 122345677777777888888754
|
| >2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=90.57 E-value=1 Score=46.62 Aligned_cols=73 Identities=14% Similarity=0.142 Sum_probs=52.3
Q ss_pred eeEEEEEcCCCcEEEEEEecCCCceeEEEEceecCCCCCCceEEEEccCCccccccccceEEEEEcCCCEEEEEE
Q 012852 371 LQVWVGPLSGHRLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQVDAHDCQMYIF 445 (455)
Q Consensus 371 ~~vw~~~l~dg~~avalfN~~~~~~~iti~l~~LGL~~~~~~~vrDlW~g~~~~g~~~~~l~~~L~pH~~~ll~l 445 (455)
.-++.+...+...+|+++|.+.+++++++++...++..+ ..++|+.+++.......+.++++|+|++++||..
T Consensus 393 ~~af~R~~~~~~~~~v~~N~~~~~~~~~~~l~~~~~~~g--~~~~d~l~~~~~~~~~~g~~~~~l~~~~~~V~~~ 465 (484)
T 2aaa_A 393 TIAMAKGTSGSQVITVLSNKGSSGSSYTLTLSGSGYTSG--TKLIEAYTCTSVTVDSSGDIPVPMASGLPRVLLP 465 (484)
T ss_dssp EEEEEESSTTTCEEEEEECSCTTCCCEEEEECCCCCCTT--CEEEETTTTEEEECCTTSCEEEEECTTCCEEEEE
T ss_pred EEEEEEEcCCCcEEEEEEcCCCCCceEEEeccccccCCC--CEEEECCCCCEEEECCCcEEEEEECCCceEEEEE
Confidence 445666544446788899998877777887776666543 4679999987651123467899999999999874
|
| >2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A* | Back alignment and structure |
|---|
Probab=89.75 E-value=0.79 Score=49.14 Aligned_cols=129 Identities=16% Similarity=0.127 Sum_probs=82.8
Q ss_pred CCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCC-----CcccCCCCC--CCCHHHHHHHHHhcCCeEEEEec
Q 012852 105 ISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKG-----QLVPDTITF--PSGIKALADYVHGKGLKLGIYSD 177 (455)
Q Consensus 105 i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G-----~~~~d~~~F--P~Gl~~l~~~v~~~G~k~Glw~~ 177 (455)
=|...|.+.++.+ +++|++.|.|---+.....+..| ...+|+ +| ++.|+.|++.+|++||++-|-+-
T Consensus 141 G~~~gi~~~L~yl-----~~lGv~~I~L~Pi~~~~~~~~wGY~~~~y~~~~~-~~Gt~~d~~~lv~~~H~~Gi~VilD~V 214 (602)
T 2bhu_A 141 GTYRAAAEKLPYL-----KELGVTAIQVMPLAAFDGQRGWGYDGAAFYAPYA-PYGRPEDLMALVDAAHRLGLGVFLDVV 214 (602)
T ss_dssp CSHHHHHHTHHHH-----HHHTCCEEEECCCEECSSSCCCSTTCCEEEEECG-GGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHH-----HHcCCCEEEECChhhccCCCCCCcccccCcccCc-CCCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 3667777777887 77999999876544332111112 223443 33 23599999999999999988875
Q ss_pred CCc---------------c------cc-----CCCCcccccHHhHHHHHH-hcCCcEEEeecCCCCCC-CccchhHHHHH
Q 012852 178 AGV---------------F------TC-----QVRPGSLFHEKDDAPLFA-SWGVDYLKYDNCFNLGI-EPKKRYPPMRD 229 (455)
Q Consensus 178 pg~---------------~------~c-----~~~Pg~~~~~~~~~~~~~-~wGidylK~D~~~~~~~-~~~~~y~~m~~ 229 (455)
+.- . .| ..+|.+++++...+..+. ++|||.+.+|....-.. .+.+..+.+++
T Consensus 215 ~NH~~~~~~~~~~~~~~~~~~~~~~~w~~~ln~~~~~v~~~i~~~~~~W~~~~gvDGfR~D~~~~i~~~~~~~fl~~~~~ 294 (602)
T 2bhu_A 215 YNHFGPSGNYLSSYAPSYFTDRFSSAWGMGLDYAEPHMRRYVTGNARMWLRDYHFDGLRLDATPYMTDDSETHILTELAQ 294 (602)
T ss_dssp CSCCCSSSCCHHHHCGGGEEEEEECSSSEEECTTSHHHHHHHHHHHHHHHHHHCCSEEEETTGGGCCCCSSSCHHHHHHH
T ss_pred ccccccCCccccccCcccccCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCCEEEEechHhhhccchHHHHHHHHH
Confidence 420 0 01 235677778777666665 79999999999754321 23345567888
Q ss_pred HHHhcCCCeeE
Q 012852 230 ALNETGCSIFY 240 (455)
Q Consensus 230 AL~~~G~~i~~ 240 (455)
++.+. +++++
T Consensus 295 ~v~~~-~~~~l 304 (602)
T 2bhu_A 295 EIHEL-GGTHL 304 (602)
T ss_dssp HHHTT-CSCCE
T ss_pred HHhhc-CCeEE
Confidence 87766 55443
|
| >3eyp_A Putative alpha-L-fucosidase; structural genomics, hydrolase, lipoprotein, PSI-2, protein initiative; 1.90A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=89.50 E-value=1.7 Score=45.17 Aligned_cols=127 Identities=12% Similarity=0.038 Sum_probs=71.4
Q ss_pred CCCHHHHHHHHHHHHHcCCcccCceEEEec----CCcCCCCCCCCCCcccCCCCC--C--CCHHHHHHHHHhcCCeEEEE
Q 012852 104 NISETIIKETADALVSTGLAELGYDHVNID----DCWSSPLRDLKGQLVPDTITF--P--SGIKALADYVHGKGLKLGIY 175 (455)
Q Consensus 104 ~i~e~~i~~~ad~~~~~gl~~~G~~~~~iD----DGW~~~~rd~~G~~~~d~~~F--P--~Gl~~l~~~v~~~G~k~Glw 175 (455)
++|.+...++++ ++|.+|+++= ||+.-- .....++.+-...| | +=+++|++.+++.|||||+|
T Consensus 53 ~fd~~~w~~~~k--------~aGaky~v~takHHdGf~lw-~S~~t~~~~~~~p~~~~k~Div~e~~~A~r~~Gl~~g~Y 123 (469)
T 3eyp_A 53 ALDCRQWMQTLK--------AAGIPAAILTAKHADGFCLW-PSKYTDYSVKNAAWKNGKGDVVREFVDACEEYGLKAGIY 123 (469)
T ss_dssp SCCHHHHHHHHH--------HTTCCEEEEEEECTTCCBSS-CCTTCSSBGGGSSGGGGTCCHHHHHHHHHHHHTCEEEEE
T ss_pred cCCHHHHHHHHH--------HcCCCEEEEEEEeCCCcccc-CCCCCCcccccCcccCCCCCHHHHHHHHHHHcCCeEEEE
Confidence 456666555544 4688898873 343221 11223443321222 2 22789999999999999999
Q ss_pred ecCCccc-----cCCCCcccccH-HhHHHHHHhcC-CcEEEeecCCCCCCCccchhHHHHHHHHhcCCCeeE
Q 012852 176 SDAGVFT-----CQVRPGSLFHE-KDDAPLFASWG-VDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFY 240 (455)
Q Consensus 176 ~~pg~~~-----c~~~Pg~~~~~-~~~~~~~~~wG-idylK~D~~~~~~~~~~~~y~~m~~AL~~~G~~i~~ 240 (455)
+.+-... +-..|.=.+|+ .++-.++..+| |+.|=+|.-.....+. ..|..+.+.+++..+++++
T Consensus 124 ~s~~dw~~~~~~~y~~~~Y~~~~~~Ql~ELlt~Yg~i~~lW~Dg~~~~~~~~-~~~~~w~~~i~~~qP~~vi 194 (469)
T 3eyp_A 124 LGPHDRHEHLSPLYTTERYKEYYAHQLGELMSDYGKIWETWWDGAGADELTT-PVYRHWYKIVREKQPDCVI 194 (469)
T ss_dssp ECSSCHHHHTSTTCCHHHHHHHHHHHHHHHHHSSCCCCEEECCCTTCTTCCH-HHHHHHHHHHHHHCTTCEE
T ss_pred eChhHhCCCcCcccCcHHHHHHHHHHHHHHHhcCCcccEEEeCCCCCCCccc-hhHhHHHHHHHHHCcCcEE
Confidence 9873211 11112212232 35556677888 5667777643322222 2344455667777788776
|
| >3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=89.32 E-value=0.95 Score=48.75 Aligned_cols=130 Identities=15% Similarity=0.079 Sum_probs=83.4
Q ss_pred CHHHHHHHHHHHHHcCCcccCceEEEecCCcCCC-----CCCCCCCcccCCCCCC--CCHHHHHHHHHhcCCeEEEEecC
Q 012852 106 SETIIKETADALVSTGLAELGYDHVNIDDCWSSP-----LRDLKGQLVPDTITFP--SGIKALADYVHGKGLKLGIYSDA 178 (455)
Q Consensus 106 ~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~-----~rd~~G~~~~d~~~FP--~Gl~~l~~~v~~~G~k~Glw~~p 178 (455)
|-+.+.+.++.+ +++|++.|.|=--+... ..+..+...+|+ +|- +.++.||+.+|++||++-+-+.+
T Consensus 152 ~~~~~~~~L~yl-----~~lGv~~v~l~Pi~~~~~~~~~GY~~~~~~~~~~-~~G~~~~~~~lv~~~H~~Gi~VilD~V~ 225 (618)
T 3m07_A 152 TFRAAIAKLPYL-----AELGVTVIEVMPVAQFGGERGWGYDGVLLYAPHS-AYGTPDDFKAFIDAAHGYGLSVVLDIVL 225 (618)
T ss_dssp SHHHHHTTHHHH-----HHHTCCEEEECCCEECSSSCCCSTTCCEEEEECT-TTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHH-----HHcCCCEEEeCChhccCCCCCCCcCcccccccCc-CcCCHHHHHHHHHHHHHCCCEEEEeecC
Confidence 667777777777 77899888763221110 111112234553 442 35999999999999999887754
Q ss_pred Cc---------------------ccc-----CCCCcccccHHhHHHHHH-hcCCcEEEeecCCCCC-CCccchhHHHHHH
Q 012852 179 GV---------------------FTC-----QVRPGSLFHEKDDAPLFA-SWGVDYLKYDNCFNLG-IEPKKRYPPMRDA 230 (455)
Q Consensus 179 g~---------------------~~c-----~~~Pg~~~~~~~~~~~~~-~wGidylK~D~~~~~~-~~~~~~y~~m~~A 230 (455)
.- ..| ..+|.+++++...+..+. +.|||.+.+|....-. ..+.+..+.+.++
T Consensus 226 NH~~~~~~~~~~~~~~~~~~~~~~~wg~~ln~~~p~V~~~i~~~~~~w~~~~gvDGfR~D~~~~~~~~~~~~f~~~l~~~ 305 (618)
T 3m07_A 226 NHFGPEGNYLPLLAPAFFHKERMTPWGNGIAYDVDAVRRYIIEAPLYWLTEYHLDGLRFDAIDQIEDSSARHVLVEIAQR 305 (618)
T ss_dssp SCCCSSSCCHHHHCGGGEEEEEEETTEEEECTTSHHHHHHHHHHHHHHHHHTTCSEEEETTGGGCCCCSSSCHHHHHHHH
T ss_pred ccCCCCcccccccCchhhcCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCccEEEecchhhhcccchHHHHHHHHHH
Confidence 20 001 346778888877777766 9999999999875431 1244566778888
Q ss_pred HHhcC--CCeeEe
Q 012852 231 LNETG--CSIFYS 241 (455)
Q Consensus 231 L~~~G--~~i~~~ 241 (455)
+++.. +++++-
T Consensus 306 v~~~~p~~~~~li 318 (618)
T 3m07_A 306 IREDITDRPIHLT 318 (618)
T ss_dssp HHHHCCSSCCEEE
T ss_pred HHHhCCCCCEEEE
Confidence 87653 445443
|
| >1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A* | Back alignment and structure |
|---|
Probab=87.50 E-value=2.5 Score=43.10 Aligned_cols=73 Identities=7% Similarity=-0.008 Sum_probs=50.3
Q ss_pred eeEEEEEcCC-CcEEEEEEecCCCceeEEEEceecCCCCCCceEEEEccCC---c-cccccccceEEEEEcCC-------
Q 012852 371 LQVWVGPLSG-HRLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQH---K-QVTGDAVSSFGAQVDAH------- 438 (455)
Q Consensus 371 ~~vw~~~l~d-g~~avalfN~~~~~~~iti~l~~LGL~~~~~~~vrDlW~g---~-~~~g~~~~~l~~~L~pH------- 438 (455)
.-++.+...+ ++.+++++|.+++++++++.+. +++. -..+|+.++ . .......+.++++|+|+
T Consensus 350 ~~~~~R~~~~~~~~~~vv~N~~~~~~~~~~~v~--~~~~---~~~~d~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~ 424 (435)
T 1mxg_A 350 ELIFVRNGDSRRPGLITYINLSPNWVGRWVYVP--KFAG---ACIHEYTGNLGGWVDKRVDSSGWVYLEAPPHDPANGYY 424 (435)
T ss_dssp EEEEEECCCSSCCCEEEEEECSSSCEEEEEECG--GGTT---CEEEESSCTTSSCCEEECCTTSEEEEEECCEEGGGTEE
T ss_pred EEEEEEeCCCCCCEEEEEEeCCCCCeEEEEEEE--ecCC---CEEEecCCCCCCCceEEEcCCCEEEEEECCccccCCCc
Confidence 5677776544 2468899999988887777653 2333 257899865 1 21123357789999999
Q ss_pred CEEEEEEEeC
Q 012852 439 DCQMYIFTPR 448 (455)
Q Consensus 439 ~~~ll~ltp~ 448 (455)
+++|++.++.
T Consensus 425 s~~v~~~~~~ 434 (435)
T 1mxg_A 425 GYSVWSYCGV 434 (435)
T ss_dssp SEEEEEETTC
T ss_pred eEEEEEecCC
Confidence 9999987643
|
| >2wvv_A Alpha-L-fucosidase; alpha-L-fucose, hydrolase, glycoside hydrolase family 29; 1.73A {Bacteroides thetaiotaomicron} PDB: 2xii_A* 2xib_A* 2wvv_B 2wvt_A* 2wvu_A* 2wvs_A* | Back alignment and structure |
|---|
Probab=85.51 E-value=7.8 Score=39.95 Aligned_cols=323 Identities=9% Similarity=0.016 Sum_probs=145.4
Q ss_pred CCCHHHHHHHHHHHHHcCCcccCceEEEec----CCcCCCCCCCCCCcccCCCCCC-CCHHHHHHHHHhcCCeEEEEecC
Q 012852 104 NISETIIKETADALVSTGLAELGYDHVNID----DCWSSPLRDLKGQLVPDTITFP-SGIKALADYVHGKGLKLGIYSDA 178 (455)
Q Consensus 104 ~i~e~~i~~~ad~~~~~gl~~~G~~~~~iD----DGW~~~~rd~~G~~~~d~~~FP-~Gl~~l~~~v~~~G~k~Glw~~p 178 (455)
++|.+...+.++ ++|.+|++|= ||+.-- -....+|.+-...+- |=+++|++.+|+.|||||||+.+
T Consensus 77 ~fDp~~Wa~~~k--------~AGakyvvlTaKHHDGF~lw-pSk~t~~n~~~~~~krDlv~el~~A~rk~Glk~GlY~S~ 147 (450)
T 2wvv_A 77 KFDAKKWAKMAK--------EMGTKYVKITTKHHEGFCLW-PSKYTKYTVANTPYKRDILGELVKAYNDEGIDVHFYFSV 147 (450)
T ss_dssp TCCHHHHHHHHH--------HHTCSEEEEEEECTTCCBSS-CCTTCSCBGGGSTTCSCHHHHHHHHHHHTTCEEEEEEES
T ss_pred cCCHHHHHHHHH--------HcCCcEEEEEEeecCCcccc-CCCCCCCccccCCCCCChHHHHHHHHHHcCCeEEEEecH
Confidence 456666555544 4588899884 243221 112234433211111 22899999999999999999987
Q ss_pred CccccCCC---Cc-------ccccH----HhHHHHHHhc-CCcEEEeecCCCCC-CCccchhHHHHHHHHhcCCCeeEee
Q 012852 179 GVFTCQVR---PG-------SLFHE----KDDAPLFASW-GVDYLKYDNCFNLG-IEPKKRYPPMRDALNETGCSIFYSL 242 (455)
Q Consensus 179 g~~~c~~~---Pg-------~~~~~----~~~~~~~~~w-GidylK~D~~~~~~-~~~~~~y~~m~~AL~~~G~~i~~~~ 242 (455)
-....+.+ +. ...|. .+.-+++..+ -+|.|=.|...... ....-....+.+.+++..+.++++
T Consensus 148 ~dw~~p~y~~~~~~~~~~~~~~~y~~~~~~Ql~ELlt~YG~~d~lWfDg~~~~~~~~~~~~~~~~~~~i~~~qP~~vv~- 226 (450)
T 2wvv_A 148 MDWSNPDYRYDIKSKEDSIAFSRFLEFTDNQLKELATRYPTVKDFWFDGTWDASVKKNGWWTAHAEQMLKELVPGVAIN- 226 (450)
T ss_dssp CCTTCTTCCSSCCSHHHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEEESCCSHHHHHTHHHHHHHHHHHHHHSTTCEEB-
T ss_pred HHhcCCcccccccccccccchHHHHHHHHHHHHHHHHcCCCcCEEEEcCCCCcCcchhhHHHHHHHHHHHHhCCcEEEE-
Confidence 42211111 11 12233 3555677889 58999999753211 000112234455555556667665
Q ss_pred CCCCCCChh-----hhhhhccCeee-ecCCCCCChhHHHHHHHhhcccc---ccc-CCCCcCCCCccccCCCCCCHHHHH
Q 012852 243 CEWGVDDPA-----LWAGKVGNSWR-TTGDINDTWASMTSIADINDKWA---SYA-GPGGWNDPDMLEVGNGGMSYQEYR 312 (455)
Q Consensus 243 c~~g~~~p~-----~w~~~~~~~~R-is~Di~~~W~~~~~~~~~~~~~~---~~~-g~g~~nDpDmL~vg~~~lT~~E~r 312 (455)
..|+..... .+....++.-+ .....-..... . .. ....|. .+. +-.+|+.-|-. . .-.|.+|-.
T Consensus 227 ~r~~~~~~g~~~~~~~~~~~gD~~t~~e~~~p~~~~~-~-~~-~~~pwE~~~ti~~~sWgY~~~~~~--~-~~ks~~~Li 300 (450)
T 2wvv_A 227 SRLRADDKGKRHFDSNGRLMGDYESGYERRLPDPVKD-L-KV-TQWDWEACMTIPENQWGYHKDWSL--S-YVKTPIEVI 300 (450)
T ss_dssp GGGCBCTTSCBSBCTTSCBCSSBBCCCBSCCCCTTTC-G-GG-GGSCBEEEECSBSSCCSCCSCGGG--S-CBCCHHHHH
T ss_pred cccCCCccccccccccccccCCccccccccCCccccc-c-CC-CcccceeeeeeCCCCccccCCCCc--c-ccCCHHHHH
Confidence 344321100 00000011111 00000000000 0 00 000111 111 11123211100 0 124666654
Q ss_pred HHHHHHHHHhCceeecCCCC---CCCHHHHHhhccH-hHHhhccCCCCCccEEeeecCCCCceeEEEEEcCCCcEEEEEE
Q 012852 313 AHFSIWALMKAPLLIGCDVR---NMTAETFEILSNK-EVIAVNQDPLGVQGRKVYVSGTDNCLQVWVGPLSGHRLVVALW 388 (455)
Q Consensus 313 t~~slwa~~gsPL~is~Dl~---~l~~~~~~lL~N~-e~iainQd~lG~~~r~v~~~~~~~~~~vw~~~l~dg~~avalf 388 (455)
..+.--+--++.|++..-+. .++++..+.|..= +-|++|-++. -+........ ...+|.-..+++..|+-++
T Consensus 301 ~~lv~~VskgGnlLLNvgP~~dG~I~~~~~~~L~~iG~wl~~ngEaI--Ygt~~~~~~~--~~~~~~T~~k~~~lYa~~~ 376 (450)
T 2wvv_A 301 DRIVHAVSMGGNMVVNFGPQADGDFRPEEKAMATAIGKWMNRYGKAV--YACDYAGFEK--QDWGYYTRGKNDEVYMVVF 376 (450)
T ss_dssp HHHHHHHHTTCEEEEEECCCTTSSCCHHHHHHHHHHHHHHHHHGGGT--TTCBCCCCCC--CTTEEEEECTTSCEEEEES
T ss_pred HHHHHHhcCCceEEEeeCCCCCCCcCHHHHHHHHHHHHHHHhhhhhe--ecccCccccC--CCcEEEEccCCCEEEEEEc
Confidence 44444344577888876554 5778888877521 3366775422 1110000001 1224444324556777777
Q ss_pred ecCCCceeEEEEceecCCCCCCceEEEEccCCcccc-cc-ccceEEEEEcC--CC-EEEEEEEeCCcc
Q 012852 389 NRCPKAETITAQWDALGLESSTKVSVRDLWQHKQVT-GD-AVSSFGAQVDA--HD-CQMYIFTPRTVT 451 (455)
Q Consensus 389 N~~~~~~~iti~l~~LGL~~~~~~~vrDlW~g~~~~-g~-~~~~l~~~L~p--H~-~~ll~ltp~~~~ 451 (455)
++-.. ..++|.+. ++ ...-+|+-|=+++.+. .. ..+.+.++||. .. .-+++|+-...+
T Consensus 377 ~~P~~-~~~~l~~~--~~--~~v~~v~lLg~~~~l~~~~~~~~~l~i~lP~~~~~~~~vikl~~~~~~ 439 (450)
T 2wvv_A 377 NQPYS-ERLIVKTP--KG--ITVEKATLLTTGEDITVVETTRNEYNVSVPKKNPGEPYVIQLKVRAAK 439 (450)
T ss_dssp SCCTT-SEEEEECC--TT--EEEEEEEETTTCCBCCEEEEETTEEEEECCSSCCSSCEEEEEEEEEC-
T ss_pred ccCCC-CeEEEEec--CC--CCceEEEEECCCCceeEEEccCCeEEEEcCCCCCCCCEEEEEEEecCC
Confidence 76433 23444333 22 1233455554554431 11 23457888874 33 466777644333
|
| >3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A | Back alignment and structure |
|---|
Probab=85.01 E-value=2.8 Score=44.33 Aligned_cols=124 Identities=17% Similarity=0.190 Sum_probs=78.4
Q ss_pred CHHHHHHHHHHHHHcCCcccCceEEEecCCcCCC-----CCCCCCCcccCCCCC--CCCHHHHHHHHHhcCCeEEEEecC
Q 012852 106 SETIIKETADALVSTGLAELGYDHVNIDDCWSSP-----LRDLKGQLVPDTITF--PSGIKALADYVHGKGLKLGIYSDA 178 (455)
Q Consensus 106 ~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~-----~rd~~G~~~~d~~~F--P~Gl~~l~~~v~~~G~k~Glw~~p 178 (455)
|-+.+.+.++.+ +++|++.|.|=--+... ..+..+...+|+ +| |+.++.|++.+|++||++=+=+.+
T Consensus 117 ~~~~~~~~l~~l-----~~lG~~~v~l~Pi~~~~~~~~~GY~~~~~~~~~~-~~Gt~~d~~~lv~~~h~~Gi~VilD~V~ 190 (558)
T 3vgf_A 117 TFEGVIRKLDYL-----KDLGITAIEIMPIAQFPGKRDWGYDGVYLYAVQN-SYGGPEGFRKLVDEAHKKGLGVILDVVY 190 (558)
T ss_dssp SHHHHHHTHHHH-----HHHTCCEEEECCCEECSSSCCCSTTCCEEEEECG-GGTHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHH-----HHcCCcEEEECCcccCCCCCCcCccccccccccc-ccCCHHHHHHHHHHHHHcCCEEEEEEee
Confidence 567777777877 77898888763221111 111112233442 34 246999999999999999886643
Q ss_pred C-----c---------c------cc--------CCCCcccccHHhHHHHHH-hcCCcEEEeecCCCC-CCCccchhHHHH
Q 012852 179 G-----V---------F------TC--------QVRPGSLFHEKDDAPLFA-SWGVDYLKYDNCFNL-GIEPKKRYPPMR 228 (455)
Q Consensus 179 g-----~---------~------~c--------~~~Pg~~~~~~~~~~~~~-~wGidylK~D~~~~~-~~~~~~~y~~m~ 228 (455)
. . . .+ ..+|.+++++...+..+. +.|||.+.+|....- ...+.+-.+.+.
T Consensus 191 NH~~~~~~~~~~~~~~~~~~~~~~~g~~~n~~~~~~~~v~~~l~~~~~~w~~~~gvDGfR~D~~~~~~~~~~~~f~~~l~ 270 (558)
T 3vgf_A 191 NHVGPEGNYMVKLGPYFSQKYKTPWGLTFNFDDAESDEVRKFILENVEYWIKEYNVDGFRLSAVHAIIDTSPKHILEEIA 270 (558)
T ss_dssp SCCCSSSCCGGGTSCCEEEEEEETTEEEECSSSTTHHHHHHHHHHHHHHHHHHHCCCEEEESCGGGCCCCSSSCHHHHHH
T ss_pred ccccCCCCcccccCCccCCCCCCCCCCcccCCCCCCHHHHHHHHHHHHHHHHHhCCCEEEEecccccccccHHHHHHHHH
Confidence 1 0 0 00 124567777777776666 899999999997443 223455667788
Q ss_pred HHHHhcC
Q 012852 229 DALNETG 235 (455)
Q Consensus 229 ~AL~~~G 235 (455)
+++++..
T Consensus 271 ~~~~~~~ 277 (558)
T 3vgf_A 271 DVVHKYN 277 (558)
T ss_dssp HHHHHTT
T ss_pred HHHhhcC
Confidence 8877665
|
| >2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A | Back alignment and structure |
|---|
Probab=84.45 E-value=3.1 Score=42.38 Aligned_cols=132 Identities=13% Similarity=0.085 Sum_probs=81.9
Q ss_pred CHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCC--CCcccCCCCCC--CCHHHHHHHHHhcCCeEEEEecCCcc
Q 012852 106 SETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLK--GQLVPDTITFP--SGIKALADYVHGKGLKLGIYSDAGVF 181 (455)
Q Consensus 106 ~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~--G~~~~d~~~FP--~Gl~~l~~~v~~~G~k~Glw~~pg~~ 181 (455)
+-..|.+.++.+ +++|++.|.|=--+.....+-+ ....+|| +|. +.++.|++.+|++||++=+=+-+.-
T Consensus 34 dl~gi~~~Ldyl-----~~LGv~~i~l~Pi~~~~~~~y~~~dy~~idp-~~Gt~~d~~~lv~~ah~~Gi~vilD~V~NH- 106 (424)
T 2dh2_A 34 NLAGLKGRLDYL-----SSLKVKGLVLGPIHKNQKDDVAQTDLLQIDP-NFGSKEDFDSLLQSAKKKSIRVILDLTPNY- 106 (424)
T ss_dssp SHHHHHTTHHHH-----HHTTCSEEEECCCEEECTTCSTTEEEEEECG-GGCCHHHHHHHHHHHHHTTCEEEEECCTTT-
T ss_pred CHHHHHHHHHHH-----HHcCCCEEEECCCCCCCCCCCCcccccccCc-cCCCHHHHHHHHHHHHHCCCEEEEEECCCc-
Confidence 667777888888 7799999888654443211100 1123553 343 3589999999999999987554421
Q ss_pred cc------CCCCcccccHHhHHHHHHhcCCcEEEeecCCCCCCCccchhHHHHHHHHhcCCC-eeEeeCCC
Q 012852 182 TC------QVRPGSLFHEKDDAPLFASWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCS-IFYSLCEW 245 (455)
Q Consensus 182 ~c------~~~Pg~~~~~~~~~~~~~~wGidylK~D~~~~~~~~~~~~y~~m~~AL~~~G~~-i~~~~c~~ 245 (455)
+. ...|.+++++...++.+.+.|||.+.+|....-. +..+-.+.+++++++..++ +++....|
T Consensus 107 ~s~~~wF~~q~~~Vr~~~~~~~~~Wl~~gvDGfRlD~v~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~e~~ 176 (424)
T 2dh2_A 107 RGENSWFSTQVDTVATKVKDALEFWLQAGVDGFQVRDIENLK-DASSFLAEWQNITKGFSEDRLLIAGTNS 176 (424)
T ss_dssp TSSSTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEECCGGGST-THHHHHHHHHHHHHHHCTTCEEEEECSC
T ss_pred CCCcccccccCHHHHHHHHHHHHHHHHcCCCEEEEeccccCC-ccHHHHHHHHHHHHHhCCCcEEEEEEec
Confidence 11 1235667777777887778999999999764321 1112345666666666544 44433333
|
| >2yih_A CEL44C, xyloglucanase; hydrolase, GH44, endo-glucanase, carbohydrate-binding protei; HET: BGC; 1.70A {Paenibacillus polymyxa} PDB: 2yjq_A* 2ykk_A* 3zq9_A* | Back alignment and structure |
|---|
Probab=83.40 E-value=5.5 Score=41.94 Aligned_cols=73 Identities=14% Similarity=0.104 Sum_probs=47.8
Q ss_pred eeEEEEEc--CCCcEEEEEEecC-CCceeEEEEceecCCCCCCceEEEEccC--Cccc--------cccccceEEEEEcC
Q 012852 371 LQVWVGPL--SGHRLVVALWNRC-PKAETITAQWDALGLESSTKVSVRDLWQ--HKQV--------TGDAVSSFGAQVDA 437 (455)
Q Consensus 371 ~~vw~~~l--~dg~~avalfN~~-~~~~~iti~l~~LGL~~~~~~~vrDlW~--g~~~--------~g~~~~~l~~~L~p 437 (455)
..+.+..- ++|...|.++|++ +++.++++++..++. ... -.+|+ +++. .....+.++++|||
T Consensus 433 v~a~As~~~~~~g~l~V~lvNr~~~~~~~v~l~l~g~~~--~~~---~~v~t~~~~~~n~~~~~~~~~~~~~~l~~tLPp 507 (524)
T 2yih_A 433 SSVHASVTNASDKELHLVVMNKSMDSAFDAQFDLSGAKT--YIS---GKVWGFDKNSSQIKEAAPITQISGNRFTYTVPP 507 (524)
T ss_dssp EEEEEEESTTCSSEEEEEEEECCSSCCEEEEEEEECSSC--CCE---EEEEEEETTEEEEEEEEEECCCBTTEEEEEECT
T ss_pred EEEEEEeecCCCCEEEEEEEECCCCCCEEEEEEecCCcc--cee---EEEEEEcCCCCCccCCCcceeccCCeEEEEECC
Confidence 56776553 5678889999998 677889998875442 112 23332 2111 00123568999999
Q ss_pred CCEEEEEEEeC
Q 012852 438 HDCQMYIFTPR 448 (455)
Q Consensus 438 H~~~ll~ltp~ 448 (455)
|+..+++|...
T Consensus 508 ~Sv~vl~l~~~ 518 (524)
T 2yih_A 508 LTAYHIVLTTG 518 (524)
T ss_dssp TEEEEEEEEC-
T ss_pred cEEEEEEEecC
Confidence 99999999743
|
| >3gza_A Putative alpha-L-fucosidase; NP_812709.1, structural genomic center for structural genomics, JCSG; HET: MSE EPE; 1.60A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=80.84 E-value=2.4 Score=43.85 Aligned_cols=126 Identities=11% Similarity=0.140 Sum_probs=69.3
Q ss_pred CCCHHHHHHHHHHHHHcCCcccCceEEEec----CCcCCCCCCCCCCcccCCCCC--C--CCHHHHHHHHHhcCCeEEEE
Q 012852 104 NISETIIKETADALVSTGLAELGYDHVNID----DCWSSPLRDLKGQLVPDTITF--P--SGIKALADYVHGKGLKLGIY 175 (455)
Q Consensus 104 ~i~e~~i~~~ad~~~~~gl~~~G~~~~~iD----DGW~~~~rd~~G~~~~d~~~F--P--~Gl~~l~~~v~~~G~k~Glw 175 (455)
.+|.+... +.+ +++|.+|+++= ||+.- -.....++.+..+.| | +=+++|++.+|+.||+||+|
T Consensus 58 ~fd~~~w~---~~~-----k~aGaky~v~t~kHHdGf~l-w~s~~t~~~~~~sp~~~~~~D~v~e~~~A~r~~gl~~g~Y 128 (443)
T 3gza_A 58 ELNTDQWV---QAA-----KAAGCKFAVLTATHETGFGL-WQSDVNPYCLKAVKWRDGKGDIVRDFVNSCRKYGLQPGIY 128 (443)
T ss_dssp TCCHHHHH---HHH-----HTTTCSEEEEESCCSSCCBS-SCCSSCSSBGGGSSGGGGTCCHHHHHHHHHHHHTCEEEEE
T ss_pred hCCHHHHH---HHH-----HHcCCCEEEEeeEeCCCccc-CCCCCCCcccccCCccCCCcCHHHHHHHHHHHcCCeEEEE
Confidence 35555554 444 46789999984 23321 011224444322233 2 22799999999999999999
Q ss_pred ecCCccc---cC--CCC--c------ccccH----HhHHHHHHhcC-CcEEEeecCCCCCCCccchhHHHHHHHHhcCCC
Q 012852 176 SDAGVFT---CQ--VRP--G------SLFHE----KDDAPLFASWG-VDYLKYDNCFNLGIEPKKRYPPMRDALNETGCS 237 (455)
Q Consensus 176 ~~pg~~~---c~--~~P--g------~~~~~----~~~~~~~~~wG-idylK~D~~~~~~~~~~~~y~~m~~AL~~~G~~ 237 (455)
+.+.-.. +. ..| + ...|. .++-+++..+| ||.|=+|.-..... .....+.+.+++..++
T Consensus 129 ~S~~W~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~Ql~ELlt~Ygpid~lWfDg~~~~~~---~~~~~~~~~i~~~qP~ 205 (443)
T 3gza_A 129 IGIRWNSLLGIHNFKAEGEGAFARNRQAWYKRLCEKMVTELCTRYGDLYMIWFDGGADDPR---ADGPDVEPIVNKYQPN 205 (443)
T ss_dssp ECCSCBTTTTEETTEESCCHHHHHHHHHHHHHHHHHHHHHHHHSSCCCSEEEETTCCCCTT---TTSCCCHHHHHHHCTT
T ss_pred ECccccCcccccccccccccccCccccHHHHHHHHHHHHHHHHhCCCccEEEEeCCCCccc---cCHHHHHHHHHHHCcC
Confidence 9983211 10 001 1 01222 35556778998 59999998653211 1112233344445666
Q ss_pred eeEe
Q 012852 238 IFYS 241 (455)
Q Consensus 238 i~~~ 241 (455)
+++.
T Consensus 206 ~vi~ 209 (443)
T 3gza_A 206 CLFY 209 (443)
T ss_dssp SEEE
T ss_pred EEEE
Confidence 6665
|
| >2zxd_A Alpha-L-fucosidase, putative; TIM barrel, hydrolase; HET: ZXD; 2.15A {Thermotoga maritima} PDB: 2zwy_A* 2zx5_A* 2zx6_A* 2zx7_A* 2zwz_A* 2zx9_A* 2zxa_A* 2zxb_A* 2zx8_A* 1hl9_A* 1hl8_A* 1odu_A* 2wsp_A* | Back alignment and structure |
|---|
Probab=80.76 E-value=4 Score=42.26 Aligned_cols=255 Identities=14% Similarity=0.069 Sum_probs=119.7
Q ss_pred CCCHHHHHHHHHHHHHcCCcccCceEEEecC----CcCCCCCCCCCCcc-cCCCCCC--CCHHHHHHHHHhcCCeEEEEe
Q 012852 104 NISETIIKETADALVSTGLAELGYDHVNIDD----CWSSPLRDLKGQLV-PDTITFP--SGIKALADYVHGKGLKLGIYS 176 (455)
Q Consensus 104 ~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDD----GW~~~~rd~~G~~~-~d~~~FP--~Gl~~l~~~v~~~G~k~Glw~ 176 (455)
++|.+...+. + +++|.+|++|=. |+.-- -....+|. ++ +=| |=+++|++.+|+.|||||+|+
T Consensus 104 ~fDp~~Wa~~---~-----k~AGakyvvlTaKHHDGF~lw-pSk~t~~ns~~--~~pkrDlv~El~~A~rk~Glk~GlY~ 172 (455)
T 2zxd_A 104 KWDPQEWADL---F-----KKAGAKYVIPTTKHHDGFCLW-GTKYTDFNSVK--RGPKRDLVGDLAKAVREAGLRFGVYY 172 (455)
T ss_dssp TCCHHHHHHH---H-----HHTTCSEEEEEEECTTCCBSS-CCSSCSCBTTT--STTCSCHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCHHHHHHH---H-----HHhCCCEEEEEeeccCCcccc-CCCCCCCcccc--cCCCCChHHHHHHHHHHcCCeEEEEe
Confidence 3566555444 4 456889999853 33211 11122332 11 111 228999999999999999999
Q ss_pred c-CCccccC------------C---CCcccccH-HhHHHHHHhcCCcEEEeecCCCCCCCccchhHHHHHHHHhcCCCee
Q 012852 177 D-AGVFTCQ------------V---RPGSLFHE-KDDAPLFASWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIF 239 (455)
Q Consensus 177 ~-pg~~~c~------------~---~Pg~~~~~-~~~~~~~~~wGidylK~D~~~~~~~~~~~~y~~m~~AL~~~G~~i~ 239 (455)
. .-....+ + .+.-.+|+ .++-+++..+|.|.|=.|....... .-....+.+.+....+.++
T Consensus 173 S~~~dW~~p~~~~~~~~~~y~~~~~~~~y~~~~~~Ql~ELlt~Y~pd~lWfDg~~~~~~--~w~~~~~~~~~~~~~P~~v 250 (455)
T 2zxd_A 173 SGGLDWRFTTEPIRYPEDLSYIRPNTYEYADYAYKQVMELVDLYLPDVLWNDMGWPEKG--KEDLKYLFAYYYNKHPEGS 250 (455)
T ss_dssp ECSCCGGGCCSCCCSGGGGGTCSCCSHHHHHHHHHHHHHHHHHHCCSEEEEESCCCGGG--TTHHHHHHHHHHHHCTTCC
T ss_pred cCCccccCcccccccccccccCCCccHHHHHHHHHHHHHHHhhcCCcEEEECCCCCccc--hhhHHHHHHHHHHhCCCEE
Confidence 8 2111000 0 11111222 4556777899999999997531110 0122344444555556666
Q ss_pred EeeCCCCCCChhhhhhhccC-eeee--cCCCC-CChhHHHHHHHhhcccccccCCCCcCCCCccccCCCCCCHHHHHHHH
Q 012852 240 YSLCEWGVDDPALWAGKVGN-SWRT--TGDIN-DTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHF 315 (455)
Q Consensus 240 ~~~c~~g~~~p~~w~~~~~~-~~Ri--s~Di~-~~W~~~~~~~~~~~~~~~~~g~g~~nDpDmL~vg~~~lT~~E~rt~~ 315 (455)
++ ..|+.. .. .+.. -.+. ..++. ..|+.. . .+..-.+|+.-+-. . .-.|.+|-...+
T Consensus 251 vn-~R~g~~-~g----d~~t~e~~~~~~~~~~~~~WE~~-------~---ti~~sWgY~~~~~~--~-~~ks~~~Li~~l 311 (455)
T 2zxd_A 251 VN-DRWGVP-HW----DFKTAEYHVNYPGDLPGYKWEFT-------R---GIGLSFGYNRNEGP--E-HMLSVEQLVYTL 311 (455)
T ss_dssp BC-SCSSSS-CC----SSEEEBTTBBCCSSCCSSCEEEE-------E---ESSSCSSCCTTCCG--G-GSCCHHHHHHHH
T ss_pred EE-cccCCC-cc----cccccccccCCcCcCCCCCceee-------e---eECCCCCcCCCCCc--c-CcCCHHHHHHHH
Confidence 64 344321 11 1100 0111 11111 235421 0 11111123211000 0 114666655444
Q ss_pred HHHHHHhCceeecCCCC---CCCHHHHHhhccH-hHHhhccCCC-CCccEEeeecCCCCceeEEEEEcCCCcEEEEEEec
Q 012852 316 SIWALMKAPLLIGCDVR---NMTAETFEILSNK-EVIAVNQDPL-GVQGRKVYVSGTDNCLQVWVGPLSGHRLVVALWNR 390 (455)
Q Consensus 316 slwa~~gsPL~is~Dl~---~l~~~~~~lL~N~-e~iainQd~l-G~~~r~v~~~~~~~~~~vw~~~l~dg~~avalfN~ 390 (455)
.--+--++.|++..-+. .++++..+.|..= +-+++|.... |-.+-.+.....++...+|.-. +++..|+-++++
T Consensus 312 v~~VskgGnlLLNvgP~~dG~I~~~~~~~L~eiG~wl~~ngEaIYgt~~w~~~~~~~~~~~~~~~T~-k~~~lYa~~l~~ 390 (455)
T 2zxd_A 312 VDVVSKGGNLLLNVGPKGDGTIPDLQKERLLGLGEWLRKYGDAIYGTSVWERCCAKTEDGTEIRFTR-KCNRIFVIFLGI 390 (455)
T ss_dssp HHHHHTTEEEEEEECCCTTSCCCHHHHHHHHHHHHHHHHHGGGTTTCBCCSCSEEEBTTCCEEEEEE-ETTEEEEEEESC
T ss_pred HHHHhcCCeEEEEeCCCCCCCcCHHHHHHHHHHHHHHHhccceeeCCccccccCCcccCCCCEEEEe-eCCEEEEEEccC
Confidence 44344577888776554 5778888877532 3377775532 1111111110000013566543 345677777887
Q ss_pred C
Q 012852 391 C 391 (455)
Q Consensus 391 ~ 391 (455)
-
T Consensus 391 P 391 (455)
T 2zxd_A 391 P 391 (455)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >2y24_A Xylanase; hydrolase, GH5 family, aldotetraouronic acid; HET: XYP GCV PG4 PGE; 1.39A {Erwinia chrysanthemi} PDB: 1nof_A* | Back alignment and structure |
|---|
Probab=80.76 E-value=12 Score=37.53 Aligned_cols=72 Identities=6% Similarity=0.017 Sum_probs=44.1
Q ss_pred eeEEEEEcCCCcEEEEEEecCCCceeEEEEceecCCCCCCceEEEEccCCcccc-----cc-ccceEEEEEcCCCEEEEE
Q 012852 371 LQVWVGPLSGHRLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQVT-----GD-AVSSFGAQVDAHDCQMYI 444 (455)
Q Consensus 371 ~~vw~~~l~dg~~avalfN~~~~~~~iti~l~~LGL~~~~~~~vrDlW~g~~~~-----g~-~~~~l~~~L~pH~~~ll~ 444 (455)
..+-+-...||+.+|++.|.++++++++++++..... .+++.--=..+++. .. ..+.++++||||++.-|.
T Consensus 305 l~~~Af~~pdg~~vvV~~N~~~~~~~~~~~l~~~~~~---~~~~y~T~~~~~~~~~~~~~~~~~~~~~~~lpa~Sv~T~v 381 (383)
T 2y24_A 305 VHLTAYKNTDGKMVIVAVNTNDSDQMLSLNISNANVT---KFEKYSTSASLNVEYGGSSQVDSSGKATVWLNPLSVTTFV 381 (383)
T ss_dssp EEEEEEECTTCCEEEEEEECSSSCEEEEEEEESCCCC---EEEEEEESSSCSSEEEEEEECCTTSEEEEEECTTEEEEEE
T ss_pred eEEEEEECCCCCEEEEEEeCCCCceeEEEEecCCccc---eeEEEEccCccccccccceeeccCCEEEEEECCCeeEEEE
Confidence 4444444568999999999999988888887743221 12221111111110 01 245789999999998776
Q ss_pred E
Q 012852 445 F 445 (455)
Q Consensus 445 l 445 (455)
+
T Consensus 382 ~ 382 (383)
T 2y24_A 382 S 382 (383)
T ss_dssp E
T ss_pred e
Confidence 5
|
| >2c7f_A Alpha-L-arabinofuranosidase; glycosidase, xylan, arabinan, hydrolase; HET: AHR; 2.7A {Clostridium thermocellum} SCOP: b.71.1.2 c.1.8.3 PDB: 2c8n_A | Back alignment and structure |
|---|
Probab=80.75 E-value=5.9 Score=41.42 Aligned_cols=73 Identities=5% Similarity=-0.040 Sum_probs=44.6
Q ss_pred eeEEEEEcCC-CcEEEEEEecC-CCceeEEEEceecCCCCCCceEEEEccCCccc----------c--------ccccce
Q 012852 371 LQVWVGPLSG-HRLVVALWNRC-PKAETITAQWDALGLESSTKVSVRDLWQHKQV----------T--------GDAVSS 430 (455)
Q Consensus 371 ~~vw~~~l~d-g~~avalfN~~-~~~~~iti~l~~LGL~~~~~~~vrDlW~g~~~----------~--------g~~~~~ 430 (455)
+++.+...++ |..+|.++|++ ++++++++++..++. ....++.-| ++.++ . ....+.
T Consensus 420 l~a~A~~~~~~g~l~v~lvN~~~~~~~~v~l~l~g~~~--~~~~~~~~l-~~~~~~~~Nt~~~~~v~p~~~~~~~~~~~~ 496 (513)
T 2c7f_A 420 IESVAIYNEEKEEVTIFAVNRNIHEDIVLVSDVRGMKD--YRLLEHIVL-EHQDLKIRNSVNGEEVYPKNSDKSSFDDGI 496 (513)
T ss_dssp CEEEEEEETTTTEEEEEEECCCTTSCEEEEEEESCC-----CEEEEEEE-CCSCTTCBCBTTBCSSCCEECCC--CCSSE
T ss_pred EEEEEEEeCCCCEEEEEEEECCCCCCEEEEEEecCcCc--cceEEEEEE-ECCCCccccCCCCCeeEeeccCceeeeCCE
Confidence 3444444455 67899999999 788888888765431 112232222 22211 0 111346
Q ss_pred EEEEEcCCCEEEEEEE
Q 012852 431 FGAQVDAHDCQMYIFT 446 (455)
Q Consensus 431 l~~~L~pH~~~ll~lt 446 (455)
++++||||+..+++|.
T Consensus 497 ~~~~lp~~S~~vl~l~ 512 (513)
T 2c7f_A 497 LTSMLRRASWNVIRIG 512 (513)
T ss_dssp EEEEECSSCEEEEEEC
T ss_pred EEEEECCCEEEEEEEe
Confidence 8999999999999985
|
| >1qw9_A Arabinosidase, alpha-L-arabinofuranosidase; hydrolase; HET: KHP; 1.20A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 1pz2_A* 1qw8_A* 1pz3_A | Back alignment and structure |
|---|
Probab=80.60 E-value=6.3 Score=41.03 Aligned_cols=73 Identities=10% Similarity=-0.003 Sum_probs=45.9
Q ss_pred eeEEEEEcCC-CcEEEEEEecC-CCceeEEEEceecCCCCCCceEEEEccCCcccc------------------ccccce
Q 012852 371 LQVWVGPLSG-HRLVVALWNRC-PKAETITAQWDALGLESSTKVSVRDLWQHKQVT------------------GDAVSS 430 (455)
Q Consensus 371 ~~vw~~~l~d-g~~avalfN~~-~~~~~iti~l~~LGL~~~~~~~vrDlW~g~~~~------------------g~~~~~ 430 (455)
+++.+...++ |..+|.++|++ ++++++++++..++. ....++. +.++.++. ....+.
T Consensus 408 l~a~A~~~~d~g~l~v~lvN~~~~~~~~v~l~l~g~~~--~~~~~~~-~l~~~~~~~~Nt~~~~~v~p~~~~~~~~~~~~ 484 (502)
T 1qw9_A 408 LESIAVYNEEKEEVTIFAVNRDMEDALLLECDVRSFED--YRVIEHI-VLEHDNVKQTNSAQSSPVVPHRNGDAQLSDRK 484 (502)
T ss_dssp EEEEEEEETTTTEEEEEEEECCSSCCEEEEEECTTSCS--CEEEEEE-EECCSCTTCBCCSSCCCCCCBSCCCCEEETTE
T ss_pred EEEEEEEECCCCEEEEEEEECCCCCCEEEEEEeCCccc--cceEEEE-EEECCCCccccCCCCCeeEeeeccceeeeCCe
Confidence 4444444456 68899999999 788888888764432 1122222 22222110 012356
Q ss_pred EEEEEcCCCEEEEEEE
Q 012852 431 FGAQVDAHDCQMYIFT 446 (455)
Q Consensus 431 l~~~L~pH~~~ll~lt 446 (455)
++++||||+..+++|.
T Consensus 485 ~~~~lp~~S~~~l~l~ 500 (502)
T 1qw9_A 485 VSATLPKLSWNVIRLG 500 (502)
T ss_dssp EEEEECSSEEEEEEEE
T ss_pred EEEEECCCEEEEEEEE
Confidence 8999999999999996
|
| >4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ... | Back alignment and structure |
|---|
Probab=80.49 E-value=3.8 Score=41.49 Aligned_cols=59 Identities=12% Similarity=0.100 Sum_probs=37.4
Q ss_pred eeEEEEEcCCCcEEEEEEecCCCceeEEEEceecCCCCCCceEEEEccCCcccccc---------ccceEEEEEcCCC
Q 012852 371 LQVWVGPLSGHRLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGD---------AVSSFGAQVDAHD 439 (455)
Q Consensus 371 ~~vw~~~l~dg~~avalfN~~~~~~~iti~l~~LGL~~~~~~~vrDlW~g~~~~g~---------~~~~l~~~L~pH~ 439 (455)
.-++.| |+.+++++|.++++++++++ .+|+.+ +.+|+.+|+...+. ..|.++++|++.+
T Consensus 416 ~iaF~R----g~~~~V~~N~~~~~~~~~~~---t~lp~G---~y~Dvlsg~~~~~~~tg~~vtV~~~G~~~i~v~~~~ 483 (496)
T 4gqr_A 416 QVAFGR----GNRGFIVFNNDDWSFSLTLQ---TGLPAG---TYCDVISGDKINGNCTGIKIYVSDDGKAHFSISNSA 483 (496)
T ss_dssp EEEEEE----TTTEEEEEECSSSCEEEEEE---CCCCSE---EEECTTTCCEETTEESSCEEEECTTSEEEEEECTTS
T ss_pred EEEEEe----CCcEEEEEECCCCCEEEEEE---cCCCCc---EEEEEEcCceecccccceEEEECCCCEEEEEECCCC
Confidence 334555 34478889999998888875 457653 45899987654211 1355566666655
|
| >3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A | Back alignment and structure |
|---|
Probab=80.02 E-value=7.5 Score=41.85 Aligned_cols=130 Identities=14% Similarity=0.099 Sum_probs=79.0
Q ss_pred CHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCC-CCCCCc-----ccCCCCCC--CCHHHHHHHHHhcCCeEEEEec
Q 012852 106 SETIIKETADALVSTGLAELGYDHVNIDDCWSSPLR-DLKGQL-----VPDTITFP--SGIKALADYVHGKGLKLGIYSD 177 (455)
Q Consensus 106 ~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~r-d~~G~~-----~~d~~~FP--~Gl~~l~~~v~~~G~k~Glw~~ 177 (455)
+-..|.+.++.+ +++|++.|.|=--+..... ...|.. .+|+ +|- +.++.|++.+|++||++-+=+-
T Consensus 104 dl~gi~~~LdyL-----~~LGv~~I~L~Pi~~~~~~~~~~GY~~~dy~~vdp-~~Gt~~df~~Lv~~aH~~GI~VilD~V 177 (644)
T 3czg_A 104 TLQGVAERVPYL-----QELGVRYLHLLPFLRARAGDNDGGFAVSDYGQVEP-SLGSNDDLVALTSRLREAGISLCADFV 177 (644)
T ss_dssp SHHHHHHTHHHH-----HHHTCCEEEECCCBCBCSSCCTTTTSBSCTTSBCG-GGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHH-----HHcCCCEEEeCCCCcCCCCCCCCCcCcccccccCc-ccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 567777777877 7799999987543332111 112322 3443 332 2599999999999999764221
Q ss_pred CC-------------------------------------------------cc----cc----------------CCCCc
Q 012852 178 AG-------------------------------------------------VF----TC----------------QVRPG 188 (455)
Q Consensus 178 pg-------------------------------------------------~~----~c----------------~~~Pg 188 (455)
+. .. .| ..+|.
T Consensus 178 ~NH~s~~~~wf~~~~~~~~~y~d~y~~~~~~~~p~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~~pdLN~~np~ 257 (644)
T 3czg_A 178 LNHTADDHAWAQAARAGDARYLDYYHHFADRTVPDRYEATLGQVFPHTAPGNFTWVDDTAQWMWTTFYPYQWDLNWSNPA 257 (644)
T ss_dssp CSEEETTSHHHHHHHTTCHHHHTTBCEESSSHHHHHHHHHCCCC------CCEEEETTTTEEEECSSSTTEEEBCTTSHH
T ss_pred cCCcccchhhHHHHhcCCCcccCceecCCCCCCCcchhhcccccCCCCCCCCccccCCCCceEecccccCCCcCCCCCHH
Confidence 10 00 00 13456
Q ss_pred ccccHHhHHHHHHhcCCcEEEeecCCCCCCC--------c--cchhHHHHHHHHhcCCCeeEe
Q 012852 189 SLFHEKDDAPLFASWGVDYLKYDNCFNLGIE--------P--KKRYPPMRDALNETGCSIFYS 241 (455)
Q Consensus 189 ~~~~~~~~~~~~~~wGidylK~D~~~~~~~~--------~--~~~y~~m~~AL~~~G~~i~~~ 241 (455)
++.++...++.+.+.|||.+.+|....-..+ + .+-.+.|++++++..+++++-
T Consensus 258 V~~~i~~~~~~wl~~GvDGfRlDa~~~i~~~~~~~~~n~p~~~~~l~~~r~~~~~~~p~~~li 320 (644)
T 3czg_A 258 VFGDMALAMLRLANLGVEAFRLDSTAYLWKRIGTDCMNQSEAHTLLVALRAVTDIVAPAVVMK 320 (644)
T ss_dssp HHHHHHHHHHHHHHTTEEEEEEETGGGSCCCTTSCSSSCHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEEecccccccccCCcccCcHHHHHHHHHHHHHHHHhCCCeEEE
Confidence 6677777777778999999999986532111 1 233467777777766665544
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 455 | ||||
| d1uasa2 | 273 | c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [ | 1e-104 | |
| d1ktba2 | 293 | c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallu | 1e-103 | |
| d1r46a2 | 292 | c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) | 1e-101 | |
| d1szna2 | 314 | c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [T | 3e-92 | |
| d1zy9a2 | 348 | c.1.8.13 (A:178-525) Alpha-galactosidase GalA cata | 1e-59 | |
| d1uasa1 | 89 | b.71.1.1 (A:274-362) Melibiase {Rice (Oryza sativa | 1e-25 | |
| d1ktba1 | 95 | b.71.1.1 (A:294-388) Melibiase {Chicken (Gallus ga | 6e-21 | |
| d1szna1 | 103 | b.71.1.1 (A:315-417) Melibiase {Trichoderma reesei | 7e-21 | |
| d1r46a1 | 98 | b.71.1.1 (A:324-421) Melibiase {Human (Homo sapien | 2e-15 |
| >d1uasa2 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Melibiase species: Rice (Oryza sativa) [TaxId: 4530]
Score = 309 bits (791), Expect = e-104
Identities = 191/271 (70%), Positives = 217/271 (80%), Gaps = 1/271 (0%)
Query: 84 NNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDL 143
NGL TPQMGWNSWN F C I+E II+ETADALV+TGLA+LGY +VNIDDCW+ RD
Sbjct: 2 ENGLGRTPQMGWNSWNHFYCGINEQIIRETADALVNTGLAKLGYQYVNIDDCWAEYSRDS 61
Query: 144 KGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVR-PGSLFHEKDDAPLFAS 202
+G VP+ TFPSGIKALADYVH KGLKLGIYSDAG TC + PGSL HE+ D FAS
Sbjct: 62 QGNFVPNRQTFPSGIKALADYVHAKGLKLGIYSDAGSQTCSNKMPGSLDHEEQDVKTFAS 121
Query: 203 WGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSWR 262
WGVDYLKYDNC + G +RY M +A+ G +IF+SLCEWG ++PA WAG++GNSWR
Sbjct: 122 WGVDYLKYDNCNDAGRSVMERYTRMSNAMKTYGKNIFFSLCEWGKENPATWAGRMGNSWR 181
Query: 263 TTGDINDTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALMK 322
TTGDI D W SMTS AD ND+WA+YAGPGGWNDPDMLEVGNGGMS EYR+HFSIWAL K
Sbjct: 182 TTGDIADNWGSMTSRADENDQWAAYAGPGGWNDPDMLEVGNGGMSEAEYRSHFSIWALAK 241
Query: 323 APLLIGCDVRNMTAETFEILSNKEVIAVNQD 353
APLLIGCDVR+M+ +T ILSN EVIAVNQD
Sbjct: 242 APLLIGCDVRSMSQQTKNILSNSEVIAVNQD 272
|
| >d1ktba2 c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Melibiase species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 307 bits (787), Expect = e-103
Identities = 134/293 (45%), Positives = 171/293 (58%), Gaps = 21/293 (7%)
Query: 83 LNNGLASTPQMGWNSWNFFACNI----------SETIIKETADALVSTGLAELGYDHVNI 132
L NGLA TP MGW +W F CN+ SE + E AD + G ELGY ++NI
Sbjct: 1 LENGLARTPPMGWLAWERFRCNVNCREDPRQCISEMLFMEMADRIAEDGWRELGYKYINI 60
Query: 133 DDCWSSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPG-SLF 191
DDCW++ RD +G+LVPD FP GIKALADYVH +GLKLGIY D G TC PG +L
Sbjct: 61 DDCWAAKQRDAEGRLVPDPERFPRGIKALADYVHARGLKLGIYGDLGRLTCGGYPGTTLD 120
Query: 192 HEKDDAPLFASWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLC------EW 245
+ DA FA WGVD LK D C++ G E + YP M ALN TG I YS
Sbjct: 121 RVEQDAQTFAEWGVDMLKLDGCYSSGKEQAQGYPQMARALNATGRPIVYSCSWPAYQGGL 180
Query: 246 GVDDPALWAGKVGNSWRTTGDINDTWASMTSIADI----NDKWASYAGPGGWNDPDMLEV 301
G++ N WR DI D+W S+ SI D D +AGPG WNDPDML +
Sbjct: 181 PPKVNYTLLGEICNLWRNYDDIQDSWDSVLSIVDWFFTNQDVLQPFAGPGHWNDPDMLII 240
Query: 302 GNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDP 354
GN G+SY++ R+ ++W +M APLL+ D+R ++ +IL N+ +I +NQDP
Sbjct: 241 GNFGLSYEQSRSQMALWTIMAAPLLMSTDLRTISPSAKKILQNRLMIQINQDP 293
|
| >d1r46a2 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Melibiase species: Human (Homo sapiens) [TaxId: 9606]
Score = 302 bits (775), Expect = e-101
Identities = 128/292 (43%), Positives = 169/292 (57%), Gaps = 20/292 (6%)
Query: 83 LNNGLASTPQMGWNSWNFFACN----------ISETIIKETADALVSTGLAELGYDHVNI 132
L+NGLA TP MGW W F CN ISE + E A+ +VS G + GY+++ I
Sbjct: 1 LDNGLARTPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCI 60
Query: 133 DDCWSSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFH 192
DDCW +P RD +G+L D FP GI+ LA+YVH KGLKLGIY+D G TC PGS +
Sbjct: 61 DDCWMAPQRDSEGRLQADPQRFPHGIRQLANYVHSKGLKLGIYADVGNKTCAGFPGSFGY 120
Query: 193 EKDDAPLFASWGVDYLKYDNCFNLGI-EPKKRYPPMRDALNETGCSIFYSL----CEWGV 247
DA FA WGVD LK+D C+ + Y M ALN TG SI YS W
Sbjct: 121 YDIDAQTFADWGVDLLKFDGCYCDSLENLADGYKHMSLALNRTGRSIVYSCEWPLYMWPF 180
Query: 248 DDP-ALWAGKVGNSWRTTGDINDTWASMTSIADI----NDKWASYAGPGGWNDPDMLEVG 302
P + N WR DI+D+W S+ SI D ++ AGPGGWNDPDML +G
Sbjct: 181 QKPNYTEIRQYCNHWRNFADIDDSWKSIKSILDWTSFNQERIVDVAGPGGWNDPDMLVIG 240
Query: 303 NGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDP 354
N G+S+ + ++WA+M APL + D+R+++ + +L +K+VIA+NQDP
Sbjct: 241 NFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQDP 292
|
| >d1szna2 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [TaxId: 51453]} Length = 314 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Melibiase species: Trichoderma reesei [TaxId: 51453]
Score = 279 bits (715), Expect = 3e-92
Identities = 115/313 (36%), Positives = 153/313 (48%), Gaps = 39/313 (12%)
Query: 80 ILQLNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSP 139
I+ + P +GWNSWN + C+I E+ A+ +VS+GL + GY++VNIDDCWS
Sbjct: 1 IVMPDGVTGKVPSLGWNSWNAYHCDIDESKFLSAAELIVSSGLLDAGYNYVNIDDCWSMK 60
Query: 140 LRDLKGQLVPDTITFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEKDDAPL 199
+ G + P+ FP GI LA VH GLKLGIYS AG TC P SL +E DA
Sbjct: 61 DGRVDGHIAPNATRFPDGIDGLAKKVHALGLKLGIYSTAGTATCAGYPASLGYEDVDAAD 120
Query: 200 FASWG-----------------------VDYLKYDNCFNLGIEPKKRYPP---------- 226
FA WG D++K P
Sbjct: 121 FADWGVDYLKYDNCNVPSDWQDEYVACNPDFVKTGPNGTCTTALDPTLAPPGYDWSTSKS 180
Query: 227 ------MRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDTWASMTSIADI 280
MR+AL + I S+C WG D W G SWR + DI+ W S+T I ++
Sbjct: 181 AERFGAMRNALAKQSHEIVLSMCIWGQADVFSWGNSTGISWRMSDDISPNWGSVTRILNL 240
Query: 281 NDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFE 340
N + G ND DMLEVGNG ++ E R HF++WA MK+PLLIG D+ ++
Sbjct: 241 NSFKLNSVDFWGHNDADMLEVGNGNLTAAETRTHFALWAAMKSPLLIGTDLAQLSQNNIN 300
Query: 341 ILSNKEVIAVNQD 353
+L NK ++A NQD
Sbjct: 301 LLKNKHLLAFNQD 313
|
| >d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: YicI catalytic domain-like domain: Alpha-galactosidase GalA catalytic domain species: Thermotoga maritima [TaxId: 2336]
Score = 196 bits (500), Expect = 1e-59
Identities = 49/354 (13%), Positives = 91/354 (25%), Gaps = 65/354 (18%)
Query: 87 LASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQ 146
+ GW SW + +++ + ++ IDD + + D
Sbjct: 2 VPKHTPTGWCSWYHYFLDLTWEETLKNLKLA-----KNFPFEVFQIDDAYEKDIGDW--- 53
Query: 147 LVPDTITFPSGIKALADYVHGKGLKLGIY------------------------------- 175
+ FP ++ +A + G GI+
Sbjct: 54 -LVTRGDFP-SVEEMAKVIAENGFIPGIWTAPFSVSETSDVFNEHPDWVVKENGEPKMAY 111
Query: 176 ---SDAGVFTCQVRPGSLFHEKDDAPLFASWGVDYLKYDNCFNLGIEPKK-----RYPPM 227
+ + L D G Y K D F + ++
Sbjct: 112 RNWNKKIYALDLSKDEVLNWLFDLFSSLRKMGYRYFKIDFLFAGAVPGERKKNITPIQAF 171
Query: 228 RDALNETGCSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDTWASMTS---------IA 278
R + ++ G P L A + R D W
Sbjct: 172 RKGIETIRKAVGEDSFILGCGSPLLPAVGCVDGMRIGPDTAPFWGEHIEDNGAPAARWAL 231
Query: 279 DINDKWASYAGPGGWNDPDM--LEVGNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTA 336
NDPD L ++ +E + ++ ++ D+ +
Sbjct: 232 RNAITRYFMHDRFWLNDPDCLILREEKTDLTQKEKELYSYTCGVLDNMIIESDDLSLVRD 291
Query: 337 ETFEILSNKEVIAVNQDPLGVQGRKVYVSGTDNCLQVWVGPLSGHRLVVALWNR 390
++L KE + + VQ +S V G LSG+ +V N
Sbjct: 292 HGKKVL--KETLELLGGRPRVQNI---MSEDLRYEIVSSGTLSGNVKIVVDLNS 340
|
| >d1uasa1 b.71.1.1 (A:274-362) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} Length = 89 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Glycosyl hydrolase domain superfamily: Glycosyl hydrolase domain family: alpha-Amylases, C-terminal beta-sheet domain domain: Melibiase species: Rice (Oryza sativa) [TaxId: 4530]
Score = 97.6 bits (243), Expect = 1e-25
Identities = 46/93 (49%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Query: 355 LGVQGRKVYVSGTDNCLQVWVGPLSGHRLVVALWNRCPKAETITAQWDALGLESSTKVSV 414
LGVQG+KV +DN L+VW GPLS +R V LWNR TITA W +GL S V+
Sbjct: 1 LGVQGKKVQ---SDNGLEVWAGPLSNNRKAVVLWNRQSYQATITAHWSNIGLAGSVAVTA 57
Query: 415 RDLWQHKQVTGDAVSSFGAQVDAHDCQMYIFTP 447
RDLW H A A V HDC+MY+ TP
Sbjct: 58 RDLWAHSSFA--AQGQISASVAPHDCKMYVLTP 88
|
| >d1ktba1 b.71.1.1 (A:294-388) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} Length = 95 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Glycosyl hydrolase domain superfamily: Glycosyl hydrolase domain family: alpha-Amylases, C-terminal beta-sheet domain domain: Melibiase species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 84.9 bits (210), Expect = 6e-21
Identities = 20/96 (20%), Positives = 41/96 (42%), Gaps = 4/96 (4%)
Query: 355 LGVQGRKVYVSGTDNCLQVWVGPLSGHRLVVALWNRCPKAE-TITAQWDALGLESSTKVS 413
LG+QGR++ + ++V++ PLS + ++R T LG
Sbjct: 1 LGIQGRRIIKE--GSHIEVFLRPLSQAASALVFFSRRTDMPFRYTTSLAKLGFPMGAAYE 58
Query: 414 VRDLWQHKQVTG-DAVSSFGAQVDAHDCQMYIFTPR 448
V+D++ K ++G +F ++ M+ P+
Sbjct: 59 VQDVYSGKIISGLKTGDNFTVIINPSGVVMWYLCPK 94
|
| >d1szna1 b.71.1.1 (A:315-417) Melibiase {Trichoderma reesei [TaxId: 51453]} Length = 103 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Glycosyl hydrolase domain superfamily: Glycosyl hydrolase domain family: alpha-Amylases, C-terminal beta-sheet domain domain: Melibiase species: Trichoderma reesei [TaxId: 51453]
Score = 85.2 bits (211), Expect = 7e-21
Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 3/85 (3%)
Query: 363 YVSGTDNCLQVWVGPLSGHRLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQ 422
+ + W GP S +V + N T A+W+ + S+ VRD+W K
Sbjct: 17 WTFNVTYPAEFWAGPSSKGH-LVLMVNTLDITATKEAKWNEIPGLSAGHYEVRDVWSDK- 74
Query: 423 VTGDAVSSFGAQVDAHDCQMYIFTP 447
+SS+ A V AHD + +
Sbjct: 75 -DLGCLSSYKAAVAAHDTAVILVGK 98
|
| >d1r46a1 b.71.1.1 (A:324-421) Melibiase {Human (Homo sapiens) [TaxId: 9606]} Length = 98 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Glycosyl hydrolase domain superfamily: Glycosyl hydrolase domain family: alpha-Amylases, C-terminal beta-sheet domain domain: Melibiase species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.5 bits (170), Expect = 2e-15
Identities = 19/99 (19%), Positives = 36/99 (36%), Gaps = 9/99 (9%)
Query: 355 LGVQGRKVYVSGTDNCLQVWVGPLSGHRLVVALWNRC--PKAETITAQWDALGLE---SS 409
LG QG ++ + +VW PLSG VA+ NR + T +LG +
Sbjct: 1 LGKQGYQLR---QGDNFEVWERPLSGLAWAVAMINRQEIGGPRSYTIAVASLGKGVACNP 57
Query: 410 TKVSVRDLWQHKQVTG-DAVSSFGAQVDAHDCQMYIFTP 447
+ L +++ + S + ++ +
Sbjct: 58 ACFITQLLPVKRKLGFYEWTSRLRSHINPTGTVLLQLEN 96
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 455 | |||
| d1uasa2 | 273 | Melibiase {Rice (Oryza sativa) [TaxId: 4530]} | 100.0 | |
| d1r46a2 | 292 | Melibiase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1ktba2 | 293 | Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} | 100.0 | |
| d1szna2 | 314 | Melibiase {Trichoderma reesei [TaxId: 51453]} | 100.0 | |
| d1zy9a2 | 348 | Alpha-galactosidase GalA catalytic domain {Thermot | 100.0 | |
| d1uasa1 | 89 | Melibiase {Rice (Oryza sativa) [TaxId: 4530]} | 99.86 | |
| d1ktba1 | 95 | Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} | 99.81 | |
| d1r46a1 | 98 | Melibiase {Human (Homo sapiens) [TaxId: 9606]} | 99.75 | |
| d1szna1 | 103 | Melibiase {Trichoderma reesei [TaxId: 51453]} | 99.72 | |
| d2f2ha4 | 338 | Putative glucosidase YicI, domain 2 {Escherichia c | 99.41 | |
| d1ji1a2 | 83 | Maltogenic amylase {Thermoactinomyces vulgaris, TV | 98.15 | |
| d1wzla2 | 83 | Maltogenic amylase {Thermoactinomyces vulgaris, TV | 97.51 | |
| d1ea9c2 | 80 | Maltogenic amylase {Bacillus sp., cyclomaltodextri | 97.36 | |
| d1j0ha2 | 83 | Neopullulanase {Bacillus stearothermophilus [TaxId | 97.35 | |
| d2bhua3 | 420 | Glycosyltrehalose trehalohydrolase, central domain | 93.67 | |
| d1j0ha3 | 382 | Neopullulanase, central domain {Bacillus stearothe | 92.46 | |
| d2c7fa1 | 131 | Alpha-l-arabinofuranosidase {Clostridium thermocel | 92.28 | |
| d1m53a1 | 78 | Isomaltulose synthase PalI {Klebsiella sp., lx3 [T | 92.12 | |
| d1eh9a3 | 400 | Glycosyltrehalose trehalohydrolase, central domain | 91.84 | |
| d1qw9a1 | 130 | Alpha-l-arabinofuranosidase {Bacillus stearothermo | 91.55 | |
| d1ht6a2 | 347 | Plant alpha-amylase {Barley (Hordeum vulgare), AMY | 91.19 | |
| d1wzla3 | 382 | Maltogenic amylase, central domain {Thermoactinomy | 90.67 | |
| d1hl9a2 | 350 | Putative alpha-L-fucosidase, catalytic domain {The | 90.19 | |
| d1g5aa1 | 74 | Amylosucrase {Neisseria polysaccharea [TaxId: 489] | 89.7 | |
| d1uoka1 | 79 | Oligo-1,6-glucosidase {Bacillus cereus [TaxId: 139 | 89.33 | |
| d1g5aa2 | 554 | Amylosucrase {Neisseria polysaccharea [TaxId: 489] | 88.56 | |
| d1wzaa2 | 409 | Bacterial alpha-amylase {Halothermothrix orenii [T | 87.66 | |
| d1qhoa4 | 407 | Cyclodextrin glycosyltransferase {Bacillus stearot | 87.06 | |
| d1nofa1 | 106 | Glycosyl hydrolase family 5 xylanase {Erwinia chry | 86.33 | |
| d1gcya2 | 357 | G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase | 85.84 | |
| d1ea9c3 | 382 | Maltogenic amylase, central domain {Bacillus sp., | 85.62 | |
| d2guya2 | 381 | Fungal alpha-amylases {Aspergillus oryzae, Taka-am | 85.21 | |
| d1e43a2 | 393 | Bacterial alpha-amylase {Chimera (Bacillus amyloli | 84.67 | |
| d2d3na2 | 394 | Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: | 84.24 | |
| d1lwha2 | 391 | 4-alpha-glucanotransferase {Thermotoga maritima [T | 83.72 | |
| d1h3ga3 | 422 | Cyclomaltodextrinase, central domain {Flavobacteri | 82.42 | |
| d1h3ga2 | 83 | Cyclomaltodextrinase {Flavobacterium sp. 92 [TaxId | 82.09 | |
| d1uoka2 | 479 | Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 13 | 81.64 | |
| d1ua7a2 | 344 | Bacterial alpha-amylase {Bacillus subtilis [TaxId: | 81.0 |
| >d1uasa2 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Melibiase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=100.00 E-value=2.9e-69 Score=529.07 Aligned_cols=271 Identities=70% Similarity=1.227 Sum_probs=260.5
Q ss_pred cCCCCCCCceEEechhhhCcCCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCcccCCCCCCCCHHHHHH
Q 012852 84 NNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIKALAD 163 (455)
Q Consensus 84 ~~~~~~~pP~gwnSW~~~~~~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~~~d~~~FP~Gl~~l~~ 163 (455)
+||++++||||||||++|++++||+.++++|++++++||+++||+||+||||||..++|..|+|++|++|||+|||+|++
T Consensus 2 ~ngla~tPp~GwnsW~~~~~~i~e~~~~~~~~~~~~~gl~~~G~~~~~iDdGW~~~~~d~~g~~~~~~~~fP~Gl~~~~~ 81 (273)
T d1uasa2 2 ENGLGRTPQMGWNSWNHFYCGINEQIIRETADALVNTGLAKLGYQYVNIDDCWAEYSRDSQGNFVPNRQTFPSGIKALAD 81 (273)
T ss_dssp CSSCCSSCCEEEESHHHHTTCCCHHHHHHHHHHHHHTSHHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTCTTCHHHHHH
T ss_pred CCccCCCCCCccCcHHhhCcCCCHHHHHHHHHHHHHcCchhhCCeEEEEcCCcCCCCCCCCCCcccCccccCCChHHHHH
Confidence 68999999999999999999999999999999999999999999999999999998888899999999999999999999
Q ss_pred HHHhcCCeEEEEecCCcccc-CCCCcccccHHhHHHHHHhcCCcEEEeecCCCCCCCccchhHHHHHHHHhcCCCeeEee
Q 012852 164 YVHGKGLKLGIYSDAGVFTC-QVRPGSLFHEKDDAPLFASWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSL 242 (455)
Q Consensus 164 ~v~~~G~k~Glw~~pg~~~c-~~~Pg~~~~~~~~~~~~~~wGidylK~D~~~~~~~~~~~~y~~m~~AL~~~G~~i~~~~ 242 (455)
+||++|||||||++|++..| ..+|+++.|++.++++|++|||||||+|+|........++|..+.++|++++|++++++
T Consensus 82 ~~~~~G~~~Glw~~~~~~~~~~~~~~~~~~~~~d~~~~~~wGvd~vK~D~~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~ 161 (273)
T d1uasa2 82 YVHAKGLKLGIYSDAGSQTCSNKMPGSLDHEEQDVKTFASWGVDYLKYDNCNDAGRSVMERYTRMSNAMKTYGKNIFFSL 161 (273)
T ss_dssp HHHHTTCEEEEEEESSSBCTTSSSBCCTTCHHHHHHHHHHHTCCEEEEECCCCTTCCHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred HHHhCCCeEEEecCCcccccCCCCCcchhhHHHHHHHHHhCCCceeccccccccchHHHHHHHHHHHHHHHhCCCcEEee
Confidence 99999999999999999888 46899999999999999999999999999998887888999999999999999999999
Q ss_pred CCCCCCChhhhhhhccCeeeecCCCCCChhHHHHHHHhhcccccccCCCCcCCCCccccCCCCCCHHHHHHHHHHHHHHh
Q 012852 243 CEWGVDDPALWAGKVGNSWRTTGDINDTWASMTSIADINDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALMK 322 (455)
Q Consensus 243 c~~g~~~p~~w~~~~~~~~Ris~Di~~~W~~~~~~~~~~~~~~~~~g~g~~nDpDmL~vg~~~lT~~E~rt~~slwa~~g 322 (455)
|.++...+..+...++|+||+++|+.+.|+++..+++.+..++.+.++++|+||||+.+++.++|.+|.|+||++|||++
T Consensus 162 ~~~g~~~~~~~~~~~~~~~R~s~D~~~~w~~~~~~~~~~~~~~~~~g~~~~~D~D~~~~~~~~~t~~E~rt~~al~~i~~ 241 (273)
T d1uasa2 162 CEWGKENPATWAGRMGNSWRTTGDIADNWGSMTSRADENDQWAAYAGPGGWNDPDMLEVGNGGMSEAEYRSHFSIWALAK 241 (273)
T ss_dssp ESTTTTCGGGTGGGTCSEEECSSCCCSSHHHHHHHHHHHHTTGGGCBTTBEEECCCCCTTSSSSCHHHHHHHHHHHHHTT
T ss_pred cccCCCcchhhhhhhhhhhcccCCcCcchhhHHHHHHHHHHHHHHhCCCcccCccccccCCCCCCHHHHHHHHHHHHHHh
Confidence 99988888888889999999999999999999988888888888999999999999999999999999999999999999
Q ss_pred CceeecCCCCCCCHHHHHhhccHhHHhhccCC
Q 012852 323 APLLIGCDVRNMTAETFEILSNKEVIAVNQDP 354 (455)
Q Consensus 323 sPL~is~Dl~~l~~~~~~lL~N~e~iainQd~ 354 (455)
|||++|+|+++++++.+++|+|+|+||||||+
T Consensus 242 ~pL~i~~Dl~~l~~~~l~ll~N~e~IAinqd~ 273 (273)
T d1uasa2 242 APLLIGCDVRSMSQQTKNILSNSEVIAVNQDS 273 (273)
T ss_dssp CCEEECSCTTSCCHHHHHHHTCHHHHHHHTCT
T ss_pred chhhhcCCcccCCHHHHHHhcCHHHHhhccCC
Confidence 99999999999999999999999999999984
|
| >d1r46a2 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Melibiase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-68 Score=527.17 Aligned_cols=271 Identities=48% Similarity=0.887 Sum_probs=247.6
Q ss_pred ccCCCCCCCceEEechhhhCcC----------CCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCcccCCC
Q 012852 83 LNNGLASTPQMGWNSWNFFACN----------ISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTI 152 (455)
Q Consensus 83 ~~~~~~~~pP~gwnSW~~~~~~----------i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~~~d~~ 152 (455)
++||++++||||||||++|+++ ++|+.++++|++++++||+++||+||+||||||..++|+.|+|++|++
T Consensus 1 ~~ng~a~~Pp~GwnSW~~~~~~~~~~~~~~~~i~E~~~~~~a~~~~~~gl~~~G~~~~~iDdGW~~~~~d~~G~~~~~~~ 80 (292)
T d1r46a2 1 LDNGLARTPTMGWLHWERFMCNLDCQEEPDSCISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRLQADPQ 80 (292)
T ss_dssp CCSSCCSSCCEEEESHHHHTTCCCTTTCTTTSCSHHHHHHHHHHHHHTTHHHHTCCEEECCSSCBCSSCCTTSCCCBCTT
T ss_pred CCCccCCCCCCCcCCHHHhccCCccccccccccCHHHHHHHHHHHHHccchhhCCeEEEEcCCcCCCCCCCCCCCccCcc
Confidence 4789999999999999999998 679999999999999999999999999999999988899999999999
Q ss_pred CCCCCHHHHHHHHHhcCCeEEEEecCCccccCCCCcccccHHhHHHHHHhcCCcEEEeecCCCCCCC-ccchhHHHHHHH
Q 012852 153 TFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEKDDAPLFASWGVDYLKYDNCFNLGIE-PKKRYPPMRDAL 231 (455)
Q Consensus 153 ~FP~Gl~~l~~~v~~~G~k~Glw~~pg~~~c~~~Pg~~~~~~~~~~~~~~wGidylK~D~~~~~~~~-~~~~y~~m~~AL 231 (455)
|||+||++|+++||++|||||||++||+.+|.++||+++|++.++++|++|||||||+|+|+.+... ..+.|..|++++
T Consensus 81 ~FP~Gl~~l~~~i~~~G~~~Giw~~~~~~~~~~~p~~~~~~~~~~~~~~~~GvdyvK~D~~~~~~~~~~~~~~~~~~~~~ 160 (292)
T d1r46a2 81 RFPHGIRQLANYVHSKGLKLGIYADVGNKTCAGFPGSFGYYDIDAQTFADWGVDLLKFDGCYCDSLENLADGYKHMSLAL 160 (292)
T ss_dssp TCTTHHHHHHHHHHHTTCEEEEEEESSSBCTTSSBCCTTTHHHHHHHHHHHTCCEEEEECCSCSSHHHHHHHHHHHHHHH
T ss_pred cccCccHHHHHHHHhcCceecccCCCccccCCCCccHHHHHHHHHHHHHHcCCCeeccCCCCCCcccchhhhhHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999877543 356789999999
Q ss_pred HhcCCCeeEeeCCCC-----C-CChhhhhhhccCeeeecCCCCCChhHHHHHHHh----hcccccccCCCCcCCCCcccc
Q 012852 232 NETGCSIFYSLCEWG-----V-DDPALWAGKVGNSWRTTGDINDTWASMTSIADI----NDKWASYAGPGGWNDPDMLEV 301 (455)
Q Consensus 232 ~~~G~~i~~~~c~~g-----~-~~p~~w~~~~~~~~Ris~Di~~~W~~~~~~~~~----~~~~~~~~g~g~~nDpDmL~v 301 (455)
++++++++++ |.++ . ..+..+...++++||+++|+.+.|+++.++++. +..++.+.+++.|||||||++
T Consensus 161 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~R~s~D~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~DpDml~~ 239 (292)
T d1r46a2 161 NRTGRSIVYS-CEWPLYMWPFQKPNYTEIRQYCNHWRNFADIDDSWKSIKSILDWTSFNQERIVDVAGPGGWNDPDMLVI 239 (292)
T ss_dssp HHHCSCCEEE-ECHHHHHTTTSCCCHHHHTTTCSEEECSCCCCSSHHHHHHHHHHHHTTTTTHHHHCBTTBEEECCCBCT
T ss_pred HHhccceeee-eccccccccccCcccccccccCceeeecCCcCCcchhHHHHHHHHHHHHHHHHHhcccCcCCCchhhcc
Confidence 9999999987 4432 1 223345678999999999999999998877653 244556789999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCceeecCCCCCCCHHHHHhhccHhHHhhccCC
Q 012852 302 GNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDP 354 (455)
Q Consensus 302 g~~~lT~~E~rt~~slwa~~gsPL~is~Dl~~l~~~~~~lL~N~e~iainQd~ 354 (455)
|+.++|++|+|+||++||+++|||++|+|+++++++.+++|+|+|+|||||||
T Consensus 240 g~~~lt~~e~r~~~alw~~~~spL~i~~dl~~~~~~~l~ll~N~e~IAinqd~ 292 (292)
T d1r46a2 240 GNFGLSWNQQVTQMALWAIMAAPLFMSNDLRHISPQAKALLQDKDVIAINQDP 292 (292)
T ss_dssp TSSSCCHHHHHHHHHHHHHTTCCEEECSCTTSCCHHHHHHHHCHHHHHHHTCT
T ss_pred CCCCCCHHHHHHHHHHHHHHhCchhccCCcccCCHHHHHHhcCHHHHhcCCCC
Confidence 99999999999999999999999999999999999999999999999999996
|
| >d1ktba2 c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Melibiase species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=100.00 E-value=1.2e-65 Score=505.56 Aligned_cols=272 Identities=49% Similarity=0.902 Sum_probs=246.4
Q ss_pred ccCCCCCCCceEEechhhhCcCCC----------HHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCcccCCC
Q 012852 83 LNNGLASTPQMGWNSWNFFACNIS----------ETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTI 152 (455)
Q Consensus 83 ~~~~~~~~pP~gwnSW~~~~~~i~----------e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~~~d~~ 152 (455)
++||++++||||||||++|++++| |+.|+++|++++++||+++||+||+||||||...+|+.|+|++|++
T Consensus 1 ~~ngla~tPp~GW~SW~~~~~~i~~~~~~~~~~~E~~i~~~a~~~~~~gl~~~G~~~v~iDDGW~~~~~d~~G~~~~~~~ 80 (293)
T d1ktba2 1 LENGLARTPPMGWLAWERFRCNVNCREDPRQCISEMLFMEMADRIAEDGWRELGYKYINIDDCWAAKQRDAEGRLVPDPE 80 (293)
T ss_dssp CCSSCCSSCCEEEESHHHHTTCCCTTTCTTTSSSHHHHHHHHHHHHHSSHHHHTCCEEECCSSCBCSSCCTTSCCCBCTT
T ss_pred CCCCcCCCCCCCccCHHhhCccccccccccccchHHHHHHHHHHHHHCcchhcCCEEEEEcCCCcCCCCCCCCCEeeChh
Confidence 468999999999999999999985 9999999999999999999999999999999988888999999999
Q ss_pred CCCCCHHHHHHHHHhcCCeEEEEecCCccccCCCCc-ccccHHhHHHHHHhcCCcEEEeecCCCCCCCccchhHHHHHHH
Q 012852 153 TFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPG-SLFHEKDDAPLFASWGVDYLKYDNCFNLGIEPKKRYPPMRDAL 231 (455)
Q Consensus 153 ~FP~Gl~~l~~~v~~~G~k~Glw~~pg~~~c~~~Pg-~~~~~~~~~~~~~~wGidylK~D~~~~~~~~~~~~y~~m~~AL 231 (455)
|||+|||+++++||++|||||||+++|...|..+|+ +..|+..+++++++|||||||+|+|.....+....+..+..++
T Consensus 81 kFP~Gl~~l~d~i~~~Gl~~Giw~~~g~~~~~~~p~~~~~~~~~d~~~~~~~G~d~~K~D~~~~~~~~~~~~~~~~~~~~ 160 (293)
T d1ktba2 81 RFPRGIKALADYVHARGLKLGIYGDLGRLTCGGYPGTTLDRVEQDAQTFAEWGVDMLKLDGCYSSGKEQAQGYPQMARAL 160 (293)
T ss_dssp TCTTHHHHHHHHHHTTTCEEEEEEEBSSBCTTSSBCBCGGGHHHHHHHHHHHTCCEEEEECTTCCHHHHHHHHHHHHHHH
T ss_pred hcCCcHHHHHHHHHhcCCceEEEccccccccCCccCccCcchhHHHHHHHHhCCceeeeccccCCcchhhhhhhHHHHHH
Confidence 999999999999999999999999999999988886 7899999999999999999999999887666667778899999
Q ss_pred HhcCCCeeEeeCC------CCCCChhhhhhhccCeeeecCCCCCChhHHHHHHH----hhcccccccCCCCcCCCCcccc
Q 012852 232 NETGCSIFYSLCE------WGVDDPALWAGKVGNSWRTTGDINDTWASMTSIAD----INDKWASYAGPGGWNDPDMLEV 301 (455)
Q Consensus 232 ~~~G~~i~~~~c~------~g~~~p~~w~~~~~~~~Ris~Di~~~W~~~~~~~~----~~~~~~~~~g~g~~nDpDmL~v 301 (455)
.++|++++++.|. .+...+..+...++++||+++|+.+.|++...+++ ....++.+.+++.|||||||++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~D~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Dml~~ 240 (293)
T d1ktba2 161 NATGRPIVYSCSWPAYQGGLPPKVNYTLLGEICNLWRNYDDIQDSWDSVLSIVDWFFTNQDVLQPFAGPGHWNDPDMLII 240 (293)
T ss_dssp HHTTSCCEEEECHHHHTTSSTTTCCHHHHHHHCSEEECSCCCCSSHHHHHHHHHHHHHTGGGTGGGCBTTBEEECCCBCT
T ss_pred HHhCchHhhhcccccccccCCcccchhhhhhcchhhhccCCcccccccHHHHHHHHHHHhHHHHhhcCCCccCChHHHhc
Confidence 9999999988541 12223344556789999999999999998765544 3456777889999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCceeecCCCCCCCHHHHHhhccHhHHhhccCC
Q 012852 302 GNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDP 354 (455)
Q Consensus 302 g~~~lT~~E~rt~~slwa~~gsPL~is~Dl~~l~~~~~~lL~N~e~iainQd~ 354 (455)
|++++|.+|+|+||++||+++|||++|+||++++++.+++|+|+|+|||||||
T Consensus 241 ~~~~~t~~e~r~~~~l~~~~~~pL~ig~dl~~~~~~~~~~l~N~e~iainqd~ 293 (293)
T d1ktba2 241 GNFGLSYEQSRSQMALWTIMAAPLLMSTDLRTISPSAKKILQNRLMIQINQDP 293 (293)
T ss_dssp TSSSCCHHHHHHHHHHHHHTTCCEEECSCTTTCCHHHHHHHTCHHHHHHHTCT
T ss_pred CCCCCCHHHHHHHHHHHHHHhCcccccCCcccCCHHHHHHhcCHHHHhhcCCC
Confidence 99999999999999999999999999999999999999999999999999996
|
| >d1szna2 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Melibiase species: Trichoderma reesei [TaxId: 51453]
Probab=100.00 E-value=1.5e-62 Score=487.06 Aligned_cols=272 Identities=44% Similarity=0.814 Sum_probs=249.5
Q ss_pred ccCCCCCCCceEEechhhhCcCCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCcccCCCCCCCCHHHHH
Q 012852 83 LNNGLASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIKALA 162 (455)
Q Consensus 83 ~~~~~~~~pP~gwnSW~~~~~~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~~~d~~~FP~Gl~~l~ 162 (455)
++++++++||||||||++|++++||+.|+++|+.++++||+++||++|+||||||...++..|+|++|++|||+||++++
T Consensus 4 p~~~~~~~Pp~GwnSW~~~~~~i~e~~i~~~a~~l~e~gl~~~G~~~~~iDdGW~~~~~~~~G~~~~d~~kFP~Gl~~~~ 83 (314)
T d1szna2 4 PDGVTGKVPSLGWNSWNAYHCDIDESKFLSAAELIVSSGLLDAGYNYVNIDDCWSMKDGRVDGHIAPNATRFPDGIDGLA 83 (314)
T ss_dssp TTSSTTTSCCEEEESHHHHTTCCCHHHHHHHHHHHHHTTHHHHTCCEEECCSSCBCTTCCBTTBCCBCTTTCTTHHHHHH
T ss_pred CCCCCCCCCCCcccchhhhcccCCHHHHHHHHHHHHHcCccccCcEEEEECCCccCCCCCCCCCeeeCHhhcCCchHHHH
Confidence 46778999999999999999999999999999999999999999999999999999878888999999999999999999
Q ss_pred HHHHhcCCeEEEEecCCccccCCCCcccccHHhHHHHHHhcCCcEEEeecCCCCC-------------------------
Q 012852 163 DYVHGKGLKLGIYSDAGVFTCQVRPGSLFHEKDDAPLFASWGVDYLKYDNCFNLG------------------------- 217 (455)
Q Consensus 163 ~~v~~~G~k~Glw~~pg~~~c~~~Pg~~~~~~~~~~~~~~wGidylK~D~~~~~~------------------------- 217 (455)
++||++|||||||++|+...|..+|+...+...+...+++||+|+.|.|.|....
T Consensus 84 ~~i~~~G~k~Giw~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~d~~~~d~~~~~~~~~~~~~~~g~d~~K~D~~~~~~~~ 163 (314)
T d1szna2 84 KKVHALGLKLGIYSTAGTATCAGYPASLGYEDVDAADFADWGVDYLKYDNCNVPSDWQDEYVACNPDFVKTGPNGTCTTA 163 (314)
T ss_dssp HHHHHTTCEEEEEEESSSBCTTSCBCCTTCHHHHHHHHHHTTCCEEEEECCCCCGGGSCSSBCCCTTTSCCBGGGBCCTT
T ss_pred HHHHhcCCeEEEeecccccccCCCcccccccccchhhhhhcCCccccchHHHHHHHHHHHHHHhCCceEEecccccchhc
Confidence 9999999999999999998898999999988888888888888888888764320
Q ss_pred C--------------CccchhHHHHHHHHhcCCCeeEeeCCCCCCChhhhhhhccCeeeecCCCCCChhHHHHHHHhhcc
Q 012852 218 I--------------EPKKRYPPMRDALNETGCSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDTWASMTSIADINDK 283 (455)
Q Consensus 218 ~--------------~~~~~y~~m~~AL~~~G~~i~~~~c~~g~~~p~~w~~~~~~~~Ris~Di~~~W~~~~~~~~~~~~ 283 (455)
. ...+.|..|+++|+++++++++++|+++...+..|...++++||+++|+.+.|+++.++++.+..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~c~~~~~~~~~~~~~~~~~~R~s~D~~~~w~~~~~~~~~~~~ 243 (314)
T d1szna2 164 LDPTLAPPGYDWSTSKSAERFGAMRNALAKQSHEIVLSMCIWGQADVFSWGNSTGISWRMSDDISPNWGSVTRILNLNSF 243 (314)
T ss_dssp TCTTBCCTTCCGGGSHHHHHHHHHHHHHHTSSSCCEEEECCTTGGGHHHHGGGTCSEEECSSCCCSSHHHHHHHHHHHHT
T ss_pred cCcccCccccCcchhhHHHHHHHHHHHHHHhCCCeEEEecCCCCCCchhhhhhcccceeecCCcccccchHHHHHHHHHH
Confidence 0 01345568899999999999999999988777778788999999999999999999888888888
Q ss_pred cccccCCCCcCCCCccccCCCCCCHHHHHHHHHHHHHHhCceeecCCCCCCCHHHHHhhccHhHHhhccCC
Q 012852 284 WASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQDP 354 (455)
Q Consensus 284 ~~~~~g~g~~nDpDmL~vg~~~lT~~E~rt~~slwa~~gsPL~is~Dl~~l~~~~~~lL~N~e~iainQd~ 354 (455)
++.+.+++.|+|||||.+|+.++|++|.|+||++||+++|||++|+|+++++++.+++|+|+|+||||||+
T Consensus 244 ~~~~~~~~~~~DpDml~~g~~~lt~~e~r~~~sl~a~~~~pl~~g~dl~~~~~~~~~ll~N~e~ia~nqd~ 314 (314)
T d1szna2 244 KLNSVDFWGHNDADMLEVGNGNLTAAETRTHFALWAAMKSPLLIGTDLAQLSQNNINLLKNKHLLAFNQDS 314 (314)
T ss_dssp CGGGCBTTBEEECCSCCTTCTTCCHHHHHHHHHHHHHTTCCEEECSCGGGCCHHHHHHHTCHHHHHHHTCS
T ss_pred HHHHhcCCccCCchhcccCCCCCCHHHHHHHHHHHHHHhCchhccCCcccCCHHHHHHhcCHHHHhhccCC
Confidence 88889999999999999999999999999999999999999999999999999999999999999999984
|
| >d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: YicI catalytic domain-like domain: Alpha-galactosidase GalA catalytic domain species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=6.5e-52 Score=418.94 Aligned_cols=250 Identities=16% Similarity=0.187 Sum_probs=208.2
Q ss_pred CCCCceEEechhhhCcCCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCcccCCCCCCCCHHHHHHHHHh
Q 012852 88 ASTPQMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIKALADYVHG 167 (455)
Q Consensus 88 ~~~pP~gwnSW~~~~~~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~~~d~~~FP~Gl~~l~~~v~~ 167 (455)
.++||||||||+++++++||+.|+++|+.+ +++|+++|+|||||+. ..|+|.+|++||| ||++|+++||+
T Consensus 3 p~~~P~gwnsW~~~~~~i~e~~i~~~a~~~-----~~~g~~~i~iDdgW~~----~~gd~~~d~~~FP-glk~l~~~~h~ 72 (348)
T d1zy9a2 3 PKHTPTGWCSWYHYFLDLTWEETLKNLKLA-----KNFPFEVFQIDDAYEK----DIGDWLVTRGDFP-SVEEMAKVIAE 72 (348)
T ss_dssp CSSCCEEEESHHHHGGGCCHHHHHHHHHHG-----GGTTCSEEEECTTSEE----ETTEEEEECTTCC-CHHHHHHHHHH
T ss_pred CCCCCCEEechhhhCCCCCHHHHHHHHHHH-----HcCCCcEEEECccccc----CCCCceECcccCc-CHHHHHHHHHh
Confidence 478999999999999999999999999987 7899999999999986 4789999999999 89999999999
Q ss_pred cCCeEEEEecCCcc----------------------------------ccCCCCcccccHHhHHHHHHhcCCcEEEeecC
Q 012852 168 KGLKLGIYSDAGVF----------------------------------TCQVRPGSLFHEKDDAPLFASWGVDYLKYDNC 213 (455)
Q Consensus 168 ~G~k~Glw~~pg~~----------------------------------~c~~~Pg~~~~~~~~~~~~~~wGidylK~D~~ 213 (455)
+|||||||++|++. .+.++|++++|+...+++|++|||||||+|||
T Consensus 73 ~G~k~gl~~~p~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~p~~~~~~~~~~~~~~~~Gvd~~K~D~~ 152 (348)
T d1zy9a2 73 NGFIPGIWTAPFSVSETSDVFNEHPDWVVKENGEPKMAYRNWNKKIYALDLSKDEVLNWLFDLFSSLRKMGYRYFKIDFL 152 (348)
T ss_dssp TTCEEEEEECTTEEETTCHHHHHCGGGBCEETTEECEEEEETTEEEEEBCTTCHHHHHHHHHHHHHHHHTTCCEEEECCG
T ss_pred cCCEEEEEeeeccccCCcHHHHhCccceeccCCCCccccccCCCCeeccCCCcHHHHHHHHHHHHHHHhcCCCEEEeCCC
Confidence 99999999998631 13679999999999999999999999999999
Q ss_pred CCCCC--------CccchhHHHHHHH-HhcCCCeeEeeCCCCCCChhhhhhhccCeeeecCCCCCChhHH---------H
Q 012852 214 FNLGI--------EPKKRYPPMRDAL-NETGCSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDTWASM---------T 275 (455)
Q Consensus 214 ~~~~~--------~~~~~y~~m~~AL-~~~G~~i~~~~c~~g~~~p~~w~~~~~~~~Ris~Di~~~W~~~---------~ 275 (455)
..... ...++|+...+++ ++.|++++++.|.+ |..+..+++++||+++|+.+.|++. .
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~c~~----p~~~~~~~~~~~Ris~Di~~~w~~~~~d~~~~~~~ 228 (348)
T d1zy9a2 153 FAGAVPGERKKNITPIQAFRKGIETIRKAVGEDSFILGCGS----PLLPAVGCVDGMRIGPDTAPFWGEHIEDNGAPAAR 228 (348)
T ss_dssp GGGGCSSBCSSSCCHHHHHHHHHHHHHHHHCTTSEEEECSC----BSGGGTTTCSEEECSSCCCSSCCTTSCSSSSSCHH
T ss_pred CCccCCcccCcccHHHHHHHHHHHHHHhhhcCCeEEecCCC----cccchhccCCeEEECCCccccccccCCCCccHHHH
Confidence 76432 2234555444444 45789999999975 4455668999999999999988542 2
Q ss_pred HHHHhhcccccccCCCCcCCCCcccc--CCCCCCHHHHHHHHHHHHHHhCceeecCCCCCCCHHHHHhhccHhHHhhccC
Q 012852 276 SIADINDKWASYAGPGGWNDPDMLEV--GNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETFEILSNKEVIAVNQD 353 (455)
Q Consensus 276 ~~~~~~~~~~~~~g~g~~nDpDmL~v--g~~~lT~~E~rt~~slwa~~gsPL~is~Dl~~l~~~~~~lL~N~e~iainQd 353 (455)
..+......+...++++||||||+.+ +++++|.+|.|+|+++|||++|||++|+|+++++++++++|+| .+++.++
T Consensus 229 ~~~~~~~~~~~~~~~~~~nDpD~l~l~~~~~~lt~~e~~~~~~l~a~~~~pl~~~~dl~~l~~~~~~llk~--~~~~~~~ 306 (348)
T d1zy9a2 229 WALRNAITRYFMHDRFWLNDPDCLILREEKTDLTQKEKELYSYTCGVLDNMIIESDDLSLVRDHGKKVLKE--TLELLGG 306 (348)
T ss_dssp HHHHHHHHTGGGBTTTBEEECCCBCCCSSSCCCCHHHHHHHHHHHHHTTCCEEECSCGGGCCHHHHHHHHH--HHTTCSS
T ss_pred HHHHhhhhccccCCCccccCccceeecCCCCCCCHHHHHHHHHHHHHhccchhccCCcccCCHHHHHHHHH--HHHHhcc
Confidence 23333233334578889999999887 5678999999999999999999999999999999999999975 5566543
|
| >d1uasa1 b.71.1.1 (A:274-362) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Glycosyl hydrolase domain superfamily: Glycosyl hydrolase domain family: alpha-Amylases, C-terminal beta-sheet domain domain: Melibiase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=99.86 E-value=1.4e-21 Score=158.78 Aligned_cols=89 Identities=48% Similarity=0.910 Sum_probs=83.4
Q ss_pred CCCccEEeeecCCCCceeEEEEEcCCCcEEEEEEecCCCceeEEEEceecCCCCCCceEEEEccCCccccccccceEEEE
Q 012852 355 LGVQGRKVYVSGTDNCLQVWVGPLSGHRLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQ 434 (455)
Q Consensus 355 lG~~~r~v~~~~~~~~~~vw~~~l~dg~~avalfN~~~~~~~iti~l~~LGL~~~~~~~vrDlW~g~~~~g~~~~~l~~~ 434 (455)
||+|++++...++ .+||.++|++|++||++||+++.+++++++|++|||+.+..|+|||||+|+++ +. +++|+++
T Consensus 1 LG~qg~~v~~~~~---~~vW~k~L~~g~~aVa~~N~~~~~~~~~~~~~~lgl~~~~~~~vrDlw~~~~~-g~-~~~~~~~ 75 (89)
T d1uasa1 1 LGVQGKKVQSDNG---LEVWAGPLSNNRKAVVLWNRQSYQATITAHWSNIGLAGSVAVTARDLWAHSSF-AA-QGQISAS 75 (89)
T ss_dssp TCCCCEEEEEETT---EEEEEEECSTTCEEEEEEECSSSCEEEEEEGGGTTCCTTCEEEEEETTTTEEE-EE-ESEEEEE
T ss_pred CCcCCEEEEecCC---EEEEEEECCCCCEEEEEEeCCCCcEEEEEEHHHcCCCCCCcEEEEECcCCCcc-cc-cceEEEE
Confidence 6999999998776 99999999999999999999999999999999999998889999999999998 64 6789999
Q ss_pred EcCCCEEEEEEEeC
Q 012852 435 VDAHDCQMYIFTPR 448 (455)
Q Consensus 435 L~pH~~~ll~ltp~ 448 (455)
|+||+|+||||+|.
T Consensus 76 v~pHg~~l~rltP~ 89 (89)
T d1uasa1 76 VAPHDCKMYVLTPN 89 (89)
T ss_dssp ECTTCEEEEEEEEC
T ss_pred ECCceEEEEEEeCC
Confidence 99999999999983
|
| >d1ktba1 b.71.1.1 (A:294-388) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Glycosyl hydrolase domain superfamily: Glycosyl hydrolase domain family: alpha-Amylases, C-terminal beta-sheet domain domain: Melibiase species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.81 E-value=7.4e-20 Score=150.16 Aligned_cols=91 Identities=22% Similarity=0.447 Sum_probs=80.6
Q ss_pred CCCccEEeeecCCCCceeEEEEEcCCCcEEEEEEec-CCCceeEEEEceecCCCCCCceEEEEccCCccccccc--cceE
Q 012852 355 LGVQGRKVYVSGTDNCLQVWVGPLSGHRLVVALWNR-CPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGDA--VSSF 431 (455)
Q Consensus 355 lG~~~r~v~~~~~~~~~~vw~~~l~dg~~avalfN~-~~~~~~iti~l~~LGL~~~~~~~vrDlW~g~~~~g~~--~~~l 431 (455)
||+|++++....+ ..|||.++|++|++||+|||+ ++.+++++++|++|||..+..|+|||||+|+++ |.+ +++|
T Consensus 1 LG~qG~rv~~~~~--~~evW~k~L~~g~~Ava~~N~~~~~p~~~~~~~~~lgl~~~~~~~vrDlw~~~~l-g~~~~~~~~ 77 (95)
T d1ktba1 1 LGIQGRRIIKEGS--HIEVFLRPLSQAASALVFFSRRTDMPFRYTTSLAKLGFPMGAAYEVQDVYSGKII-SGLKTGDNF 77 (95)
T ss_dssp TCCCCEEEEECTT--SEEEEEEECSTTCEEEEEEECCSSSCEEEEEEHHHHTCCTTCEEEEEETTTCCEE-EEEETTSEE
T ss_pred CCcCcEEEEEcCC--cEEEEEEECCCCCEEEEEEECCCCccEEEEEEHHHcCCCCCCceEEEEccCCCcc-ceeccCCeE
Confidence 6999988865432 289999999999999999997 556799999999999998888999999999998 754 5789
Q ss_pred EEEEcCCCEEEEEEEeC
Q 012852 432 GAQVDAHDCQMYIFTPR 448 (455)
Q Consensus 432 ~~~L~pH~~~ll~ltp~ 448 (455)
++.|+|||++|||++|.
T Consensus 78 tv~V~phGv~~~r~~P~ 94 (95)
T d1ktba1 78 TVIINPSGVVMWYLCPK 94 (95)
T ss_dssp EEEECTTCEEEEEEEEC
T ss_pred EEEECCCeEEEEEEEeC
Confidence 99999999999999996
|
| >d1r46a1 b.71.1.1 (A:324-421) Melibiase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Glycosyl hydrolase domain superfamily: Glycosyl hydrolase domain family: alpha-Amylases, C-terminal beta-sheet domain domain: Melibiase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.75 E-value=2.3e-18 Score=141.96 Aligned_cols=90 Identities=22% Similarity=0.297 Sum_probs=78.9
Q ss_pred CCCccEEeeecCCCCceeEEEEEcCCCcEEEEEEecCCC--ceeEEEEceecCCCC---CCceEEEEccCCccccccc--
Q 012852 355 LGVQGRKVYVSGTDNCLQVWVGPLSGHRLVVALWNRCPK--AETITAQWDALGLES---STKVSVRDLWQHKQVTGDA-- 427 (455)
Q Consensus 355 lG~~~r~v~~~~~~~~~~vw~~~l~dg~~avalfN~~~~--~~~iti~l~~LGL~~---~~~~~vrDlW~g~~~~g~~-- 427 (455)
||+|++++...++ .|||++||++|++||++||+++. +.++++++++||+.. ...|.|||||+++++ |.+
T Consensus 1 LG~qg~rv~~~~~---~eVW~k~L~~g~~Ava~~N~~~~~~p~~~~~~~~~lg~~~~~~~~~y~vrDLw~~~~l-G~~~~ 76 (98)
T d1r46a1 1 LGKQGYQLRQGDN---FEVWERPLSGLAWAVAMINRQEIGGPRSYTIAVASLGKGVACNPACFITQLLPVKRKL-GFYEW 76 (98)
T ss_dssp TCCCCEEEECSSS---EEEEEEECSSSEEEEEEEECCCSSSCEEEEEESTTTBTTTBTSSEEECEEEESSCCCC-CEEES
T ss_pred CCcCcEEEEecCC---EEEEEEECCCCCEEEEEEEccCCCccEEEEEEHHHcCCccccCCCceEEEEccCCccc-ceEcc
Confidence 6999999997655 99999999999999999999884 578899999999863 346899999999998 765
Q ss_pred cceEEEEEcCCCEEEEEEEeC
Q 012852 428 VSSFGAQVDAHDCQMYIFTPR 448 (455)
Q Consensus 428 ~~~l~~~L~pH~~~ll~ltp~ 448 (455)
+++|++.|+|||++|||+++.
T Consensus 77 ~~~~~~~V~PhGv~~lr~~~~ 97 (98)
T d1r46a1 77 TSRLRSHINPTGTVLLQLENT 97 (98)
T ss_dssp SCEEEEEECTTCEEEEEEEBC
T ss_pred CCeEEEEECCceEEEEEEEcc
Confidence 478999999999999999874
|
| >d1szna1 b.71.1.1 (A:315-417) Melibiase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Glycosyl hydrolase domain superfamily: Glycosyl hydrolase domain family: alpha-Amylases, C-terminal beta-sheet domain domain: Melibiase species: Trichoderma reesei [TaxId: 51453]
Probab=99.72 E-value=1.3e-17 Score=138.16 Aligned_cols=91 Identities=26% Similarity=0.391 Sum_probs=77.1
Q ss_pred CCccEEeeecCC-------CCceeEEEEEcCCCcEEEEEEecCCCceeEEEEceecCCCCCCceEEEEccCCcccccccc
Q 012852 356 GVQGRKVYVSGT-------DNCLQVWVGPLSGHRLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGDAV 428 (455)
Q Consensus 356 G~~~r~v~~~~~-------~~~~~vw~~~l~dg~~avalfN~~~~~~~iti~l~~LGL~~~~~~~vrDlW~g~~~~g~~~ 428 (455)
|+++.|..-..+ ..+.|||++||+||+ +|+|||+++.+++++++|+++|+..+..|+|||||+|+++ +..
T Consensus 3 g~~a~p~~~g~~pd~~~~~~~~~evWagpLs~G~-~V~L~Nr~~~~~tit~~~~~ig~~~~~~~~vrDLWs~~~l-g~~- 79 (103)
T d1szna1 3 GQPATPYKWGINPDWTFNVTYPAEFWAGPSSKGH-LVLMVNTLDITATKEAKWNEIPGLSAGHYEVRDVWSDKDL-GCL- 79 (103)
T ss_dssp CSCCEEEECSSSCTTCCCSSSCCCEEEECCTTCE-EEEEECCSSSCEEEEECGGGSTTCCSSEEEEEETTTTEEE-EEE-
T ss_pred ccccccccCCCCCCcccCCCCCceEEeeEcCCCC-EEEEEeCCCCCEeEEEEHHHcCCCCCCcEEEEEeecCccc-Ccc-
Confidence 666666653211 245799999999996 6899999999999999999999877789999999999998 766
Q ss_pred ceEEEEEcCCCEEEEEEEeCC
Q 012852 429 SSFGAQVDAHDCQMYIFTPRT 449 (455)
Q Consensus 429 ~~l~~~L~pH~~~ll~ltp~~ 449 (455)
++++++|+||+|+||||++..
T Consensus 80 ~~~sa~V~~H~~~~lrlt~~~ 100 (103)
T d1szna1 80 SSYKAAVAAHDTAVILVGKKC 100 (103)
T ss_dssp SSEEEEECTTCEEEEEEEEEE
T ss_pred ceEEEEECCCcEEEEEEcccc
Confidence 469999999999999999864
|
| >d2f2ha4 c.1.8.13 (A:248-585) Putative glucosidase YicI, domain 2 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: YicI catalytic domain-like domain: Putative glucosidase YicI, domain 2 species: Escherichia coli [TaxId: 562]
Probab=99.41 E-value=4.4e-12 Score=125.12 Aligned_cols=170 Identities=19% Similarity=0.261 Sum_probs=123.7
Q ss_pred EechhhhCcCCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCcccCCCCCCCCHHHHHHHHHhcCCeEEE
Q 012852 95 WNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQLVPDTITFPSGIKALADYVHGKGLKLGI 174 (455)
Q Consensus 95 wnSW~~~~~~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~~~d~~~FP~Gl~~l~~~v~~~G~k~Gl 174 (455)
+|.| .+.+.+|+.+++.++.+.+.+ +.++.|+||++|+.. ...|++..|+++||+ ++.+++.+|++|+++++
T Consensus 26 ~~~~--~~~~~~~~~v~~~~~~~r~~~---iP~d~i~iD~~w~~~--~~~~~f~~d~~~FPd-p~~~i~~l~~~G~~~~l 97 (338)
T d2f2ha4 26 LTTS--FTTNYDEATVNSFIDGMAERN---LPLHVFHFDCFWMKA--FQWCDFEWDPLTFPD-PEGMIRRLKAKGLKICV 97 (338)
T ss_dssp EECC--SSSCCCHHHHHHHHHHHHHTT---CCCCEEEECGGGBCT--TCCSSCCBCTTTCSC-HHHHHHHHHHTTCEEEE
T ss_pred HHhC--CCCCCCHHHHHHHHHHHHHcC---CCcceEEEcCchhcC--CCcCceeeCcccCCC-HHHHHHHHHHCCCeEEE
Confidence 4444 456789999999999998854 448999999999863 234689999999998 99999999999999999
Q ss_pred EecCCccc-----------------------------------cCCCCcccccHHhHHHHHHhcCCcEEEeecCCCCCC-
Q 012852 175 YSDAGVFT-----------------------------------CQVRPGSLFHEKDDAPLFASWGVDYLKYDNCFNLGI- 218 (455)
Q Consensus 175 w~~pg~~~-----------------------------------c~~~Pg~~~~~~~~~~~~~~wGidylK~D~~~~~~~- 218 (455)
|+.|+... ..++|.+.+++...++.+.+.|||++|.|++.....
T Consensus 98 ~~~P~i~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~D~tnp~a~~w~~~~~~~~~~~Gidg~w~D~~e~~~~d 177 (338)
T d2f2ha4 98 WINPYIGQKSPVFKELQEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPDACKWYADKLKGLVAMGVDCFKTDFGERIPTD 177 (338)
T ss_dssp EECSEECTTSTTHHHHHHHTCBCBCTTSSBCCBSSSSTTBEEBCTTSHHHHHHHHHHHHHHHHTTCCEEEECCCCCCCSS
T ss_pred eecCccCCCChhHHHHHhCCEEEECCCCCceeeecCCCCccccccCCHHHHHHHHHHhhcccccCCceEEecCCCCCCCc
Confidence 99884210 145778888887778888899999999999864321
Q ss_pred -------Cc---cchh-----HHHHHHHHhc---CCCeeEeeCCCCCCChhhhhhhccCeeeecCCCCCChhHHHHHHHh
Q 012852 219 -------EP---KKRY-----PPMRDALNET---GCSIFYSLCEWGVDDPALWAGKVGNSWRTTGDINDTWASMTSIADI 280 (455)
Q Consensus 219 -------~~---~~~y-----~~m~~AL~~~---G~~i~~~~c~~g~~~p~~w~~~~~~~~Ris~Di~~~W~~~~~~~~~ 280 (455)
.+ ...| +.+.+++++. .|+++++-+.+.. ...++-.| ++|+..+|+.+...+..
T Consensus 178 ~~~~~~~~~~~~~n~y~~~~~~~~~~~~~~~~~~~r~~~~~rs~~~G------sqry~~~W--~GD~~s~w~~L~~~i~~ 249 (338)
T d2f2ha4 178 VQWFDGSDPQKMHNHYAYIYNELVWNVLKDTVGEEEAVLFARSASVG------AQKFPVHW--GGDCYANYESMAESLRG 249 (338)
T ss_dssp SBCTTCCCHHHHHHHHHHHHHHHHHHHHHTTTCGGGCCEEESCBCTT------GGGSCCEE--CCCCCSSHHHHHHHHHH
T ss_pred cccccCcchhhhcchhHHHHHHHHHHHHHHhccccccceeecccccc------ccccceEe--cCCCCCChHHHHHHHHH
Confidence 11 1122 2345666543 3567777554322 12456667 78999999988766543
|
| >d1ji1a2 b.71.1.1 (A:555-637) Maltogenic amylase {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Glycosyl hydrolase domain superfamily: Glycosyl hydrolase domain family: alpha-Amylases, C-terminal beta-sheet domain domain: Maltogenic amylase species: Thermoactinomyces vulgaris, TVAI [TaxId: 2026]
Probab=98.15 E-value=8.1e-06 Score=63.35 Aligned_cols=70 Identities=11% Similarity=0.028 Sum_probs=58.7
Q ss_pred eeEEEEEcCCCcEEEEEEecCCCceeEEEEceecCCCCCCceEEEEccCCccccccccceEEEEEcCCCEEEEE
Q 012852 371 LQVWVGPLSGHRLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQVDAHDCQMYI 444 (455)
Q Consensus 371 ~~vw~~~l~dg~~avalfN~~~~~~~iti~l~~LGL~~~~~~~vrDlW~g~~~~g~~~~~l~~~L~pH~~~ll~ 444 (455)
.-++.|... ++.+++++|.++++++++++....++..+ -..+|+|+++.. ....|+++++||||+.+||.
T Consensus 13 v~ay~R~~~-~e~vlV~~N~s~~~~~v~l~~~~~~~~~~--~~~~dll~g~~~-~v~~G~l~ltlpp~s~~vL~ 82 (83)
T d1ji1a2 13 IYSYGRFDN-VNRIAVVLNNDSVSHTVNVPVWQLSMPNG--STVTDKITGHSY-TVQNGMVTVAVDGHYGAVLA 82 (83)
T ss_dssp EEEEEEECS-SCEEEEEEECSSSCEEEEECGGGGTCCTT--CEEEETTTCCEE-ECBTTBEEEEECTTEEEEEE
T ss_pred EEEEEEEcC-CcEEEEEEeCCCCCEEEEecccccccccC--cEEEEccCCCEE-EEECCEEEEEECCCEEEEEE
Confidence 556788774 46799999999999999999988887764 467999999987 56678999999999999874
|
| >d1wzla2 b.71.1.1 (A:503-585) Maltogenic amylase {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Glycosyl hydrolase domain superfamily: Glycosyl hydrolase domain family: alpha-Amylases, C-terminal beta-sheet domain domain: Maltogenic amylase species: Thermoactinomyces vulgaris, TVAII [TaxId: 2026]
Probab=97.51 E-value=0.00046 Score=52.97 Aligned_cols=67 Identities=13% Similarity=0.099 Sum_probs=53.8
Q ss_pred eeEEEEEcCCCcEEEEEEecCCCceeEEEEceecCCCCCCceEEEEccCCccccccccceEEEEEcCCCEEEEE
Q 012852 371 LQVWVGPLSGHRLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQVDAHDCQMYI 444 (455)
Q Consensus 371 ~~vw~~~l~dg~~avalfN~~~~~~~iti~l~~LGL~~~~~~~vrDlW~g~~~~g~~~~~l~~~L~pH~~~ll~ 444 (455)
.-++.|...+ +.+++++|.++++++++++....+ + -..+|+++++.. ....++++++|+|++.+||.
T Consensus 14 v~af~R~~~~-e~vlVv~N~s~~~~~v~lp~~~~~--~---~~~~dllsg~~~-~~~~g~l~ltL~p~~~~IL~ 80 (83)
T d1wzla2 14 LYAFVRTVQD-QHVGVVLNNRGEKQTVLLQVPESG--G---KTWLDCLTGEEV-HGKQGQLKLTLRPYQGMILW 80 (83)
T ss_dssp EEEEEEEETT-EEEEEEEECSSSCEEEEEECCGGG--C---SEEEETTTCCEE-ECBTTEEEEEECTTCEEEEE
T ss_pred EEEEEEECCC-CEEEEEEECCCccEEEEEcCcccc--c---eeeEEccCCcEE-EecCCeEEEEECCCEEEEEE
Confidence 5566777654 678999999999999999865321 1 257899999987 66678999999999999985
|
| >d1ea9c2 b.71.1.1 (C:504-583) Maltogenic amylase {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Glycosyl hydrolase domain superfamily: Glycosyl hydrolase domain family: alpha-Amylases, C-terminal beta-sheet domain domain: Maltogenic amylase species: Bacillus sp., cyclomaltodextrinase [TaxId: 1409]
Probab=97.36 E-value=5.9e-05 Score=57.95 Aligned_cols=66 Identities=12% Similarity=0.144 Sum_probs=52.5
Q ss_pred eeEEEEEcCCCcEEEEEEecCCCceeEEEEceecCCCCCCceEEEEccCCccccccccceEEEEEcCCCEEEEEEE
Q 012852 371 LQVWVGPLSGHRLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQVDAHDCQMYIFT 446 (455)
Q Consensus 371 ~~vw~~~l~dg~~avalfN~~~~~~~iti~l~~LGL~~~~~~~vrDlW~g~~~~g~~~~~l~~~L~pH~~~ll~lt 446 (455)
.=++.|... +..+++++|.+++++++++++. . -+++|+|+++.. ....+.++++|||++.++|+.+
T Consensus 13 v~ay~R~~~-~e~vlVv~N~S~~~~tv~lp~~-----~---~~~~~l~~g~~~-~~~~~~~tltLpp~~~~il~a~ 78 (80)
T d1ea9c2 13 QIAYLREDD-QDTILVVMNNDKAGHTLTLPVR-----H---AQWTHLWQDDVL-TAAHGQLTVKLPAYGFAVLKAS 78 (80)
T ss_dssp EEEEEEECS-SCEEEEEEECSSSCEEEEEECC-----S---SSCCEEBSTTCC-EECCCSSEEEEEECSSCCCEEC
T ss_pred EEEEEEecC-CCEEEEEEECCCCCEEEEecCC-----C---CeEEEeecCcee-eccCCcEEEEECCccEEEEEEe
Confidence 446677765 4689999999999999988853 1 246899999876 5566778999999999999875
|
| >d1j0ha2 b.71.1.1 (A:506-588) Neopullulanase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Glycosyl hydrolase domain superfamily: Glycosyl hydrolase domain family: alpha-Amylases, C-terminal beta-sheet domain domain: Neopullulanase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.35 E-value=0.00037 Score=53.25 Aligned_cols=68 Identities=10% Similarity=0.163 Sum_probs=54.2
Q ss_pred eeEEEEEcCCCcEEEEEEecCCCceeEEEEceecCCCCCCceEEEEccCCccccccccceEEEEEcCCCEEEEEEE
Q 012852 371 LQVWVGPLSGHRLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQVDAHDCQMYIFT 446 (455)
Q Consensus 371 ~~vw~~~l~dg~~avalfN~~~~~~~iti~l~~LGL~~~~~~~vrDlW~g~~~~g~~~~~l~~~L~pH~~~ll~lt 446 (455)
.=++.|...+ ..+++++|.++++++++++.+ +. ...++|+++++.. ....+..+++|+|.+..+|++.
T Consensus 14 v~ay~R~~~~-~~vLVv~N~S~~~~~v~lp~~---~~---~~~~~~l~~~~~~-~~~~~~~~ltL~Py~~~i~~~e 81 (83)
T d1j0ha2 14 YLIYKKTDGD-ETVLVIINRSDQKADIPIPLD---AR---GTWLVNLLTGERF-AAEAETLCTSLPPYGFVLYAIE 81 (83)
T ss_dssp EEEEEEECSS-CEEEEEEECSSSCEEEECCCC---CS---SEEEEETTTCCEE-ECCSSSCEEEECTTCEEEEEEE
T ss_pred EEEEEEECCC-CEEEEEEeCCCCCEEEEccCc---cc---cCcEEEecCCccc-cccCCceEEEECCcEEEEEEEE
Confidence 5567777655 578999999999999988764 22 2578999999876 4556778899999999999985
|
| >d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Glycosyltrehalose trehalohydrolase, central domain species: Deinococcus radiodurans [TaxId: 1299]
Probab=93.67 E-value=0.16 Score=48.58 Aligned_cols=131 Identities=15% Similarity=0.086 Sum_probs=87.2
Q ss_pred CCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCc-----ccCCCCCC--CCHHHHHHHHHhcCCeEEEEec
Q 012852 105 ISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQL-----VPDTITFP--SGIKALADYVHGKGLKLGIYSD 177 (455)
Q Consensus 105 i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~-----~~d~~~FP--~Gl~~l~~~v~~~G~k~Glw~~ 177 (455)
=|-+.|.+.++.+ +++|++.|.|=--......+..|.. .+|| +|- +.++.|++.+|++||++=+=+.
T Consensus 31 Gd~~g~~~~ldyl-----~~LGv~~i~L~Pv~~~~~~~~~GY~~~d~~~vdp-~~G~~~d~~~lv~~aH~~gi~VilD~V 104 (420)
T d2bhua3 31 GTYRAAAEKLPYL-----KELGVTAIQVMPLAAFDGQRGWGYDGAAFYAPYA-PYGRPEDLMALVDAAHRLGLGVFLDVV 104 (420)
T ss_dssp CSHHHHHHTHHHH-----HHHTCCEEEECCCEECSSSCCCSTTCCEEEEECG-GGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHhHHHH-----HHcCCCEEEeCCCCcCCCCCCCCCCcccCCCcCc-ccCCHHHHHHHHHHHHhcccccccccc
Confidence 4677888888888 7789999988533322122222422 3443 332 2489999999999999887665
Q ss_pred CCc---------------------ccc-----CCCCcccccHHhHHHHH-HhcCCcEEEeecCCCCCC-CccchhHHHHH
Q 012852 178 AGV---------------------FTC-----QVRPGSLFHEKDDAPLF-ASWGVDYLKYDNCFNLGI-EPKKRYPPMRD 229 (455)
Q Consensus 178 pg~---------------------~~c-----~~~Pg~~~~~~~~~~~~-~~wGidylK~D~~~~~~~-~~~~~y~~m~~ 229 (455)
+.- ..| ..+|.+++++...++.+ .+.|||.+.+|....-.. ........+++
T Consensus 105 ~NH~~~~~~~~~~~~~~~~~~~~~~~~~~dlN~~np~v~~~~~~~~~~Wl~~~GVDGfR~D~~~~l~~~~~~~~~~~~~~ 184 (420)
T d2bhua3 105 YNHFGPSGNYLSSYAPSYFTDRFSSAWGMGLDYAEPHMRRYVTGNARMWLRDYHFDGLRLDATPYMTDDSETHILTELAQ 184 (420)
T ss_dssp CSCCCSSSCCHHHHCGGGEEEEEECSSSEEECTTSHHHHHHHHHHHHHHHHHHCCSEEEETTGGGCCCCSSSCHHHHHHH
T ss_pred ccccCCCCccccccccccccccccccccccccccChHHHHHHHHHhheeeecccccEEEEeeeeeeccccccccHHHHHH
Confidence 420 011 35788899988888876 588999999998543322 22345567888
Q ss_pred HHHhcCCCeeEe
Q 012852 230 ALNETGCSIFYS 241 (455)
Q Consensus 230 AL~~~G~~i~~~ 241 (455)
++++.+++.++.
T Consensus 185 ~~~~~~p~~~~i 196 (420)
T d2bhua3 185 EIHELGGTHLLL 196 (420)
T ss_dssp HHHTTCSCCEEE
T ss_pred HHHhhcCCceee
Confidence 888888765554
|
| >d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Neopullulanase, central domain species: Bacillus stearothermophilus [TaxId: 1422]
Probab=92.46 E-value=0.4 Score=44.89 Aligned_cols=130 Identities=17% Similarity=0.202 Sum_probs=82.3
Q ss_pred CCCHHHHHHHHHHHHHcCCcccCceEEEec------CCcCCCCCCCCCCcccCCCCCC--CCHHHHHHHHHhcCCeEEEE
Q 012852 104 NISETIIKETADALVSTGLAELGYDHVNID------DCWSSPLRDLKGQLVPDTITFP--SGIKALADYVHGKGLKLGIY 175 (455)
Q Consensus 104 ~i~e~~i~~~ad~~~~~gl~~~G~~~~~iD------DGW~~~~rd~~G~~~~d~~~FP--~Gl~~l~~~v~~~G~k~Glw 175 (455)
.=|-+.|.+.++.+ +++|++.|.|= .+|.- +......+|+ +|. +.++.|++.+|++||++-+=
T Consensus 49 ~G~~~gi~~kldyl-----~~LGv~~i~L~Pi~~~~~~~gy---~~~d~~~vd~-~~Gt~~~~~~lv~~aH~~Gi~VilD 119 (382)
T d1j0ha3 49 GGDLQGIIDHLDYL-----VDLGITGIYLTPIFRSPSNHKY---DTADYFEVDP-HFGDKETLKTLIDRCHEKGIRVMLD 119 (382)
T ss_dssp CCCHHHHHHTHHHH-----HHHTCCEEEECCCEECSSSSCC---SCSEEEEECT-TTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CcCHHHHHHhHHHH-----HHcCCCEEEeCCCCcCCcccCC---CcccccccCC-CCCCHHHHHHHHHHhhhccceEEEE
Confidence 34678888888988 67899888872 11211 1111234453 444 25999999999999999877
Q ss_pred ecCCc----------------------c-----------------c-----c-----CCCCcccccHHhHHHHH-HhcCC
Q 012852 176 SDAGV----------------------F-----------------T-----C-----QVRPGSLFHEKDDAPLF-ASWGV 205 (455)
Q Consensus 176 ~~pg~----------------------~-----------------~-----c-----~~~Pg~~~~~~~~~~~~-~~wGi 205 (455)
+-+.- . . + ..+|.+++++...+..+ ++.||
T Consensus 120 ~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~n~~vr~~l~~~~~~wi~~~gi 199 (382)
T d1j0ha3 120 AVFNHCGYEFAPFQDVWKNGESSKYKDWFHIHEFPLQTEPRPNYDTFAFVPQMPKLNTANPEVKRYLLDVATYWIREFDI 199 (382)
T ss_dssp ECCSBCCTTCHHHHHHHHHGGGCTTGGGBCBSSSSCCCSSSCSBCBSTTCTTSBBBCTTSHHHHHHHHHHHHHHHHHHCC
T ss_pred eeecccccccccchhhhccCCccccCCccccccccccccccccccccccCCCCcccccChHHHHHHHHHHHHhHhhhccc
Confidence 64310 0 0 0 23566777777777665 58999
Q ss_pred cEEEeecCCCCCCCccchhHHHHHHHHhcCCCeeEeeCCC
Q 012852 206 DYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEW 245 (455)
Q Consensus 206 dylK~D~~~~~~~~~~~~y~~m~~AL~~~G~~i~~~~c~~ 245 (455)
|.+.+|....- ..+....+.+++++..+.+++..-.|
T Consensus 200 DGfR~Da~~~~---~~~~~~~~~~~~~~~~p~~~~i~e~~ 236 (382)
T d1j0ha3 200 DGWRLDVANEI---DHEFWREFRQEVKALKPDVYILGEIW 236 (382)
T ss_dssp CEEEETTGGGS---CHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred cEEEecchhhc---chhhhhhhhhhhhccCCCcccccccc
Confidence 99999987543 23445666677776666654443333
|
| >d2c7fa1 b.71.1.2 (A:2-16,A:387-502) Alpha-l-arabinofuranosidase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Glycosyl hydrolase domain superfamily: Glycosyl hydrolase domain family: Composite domain of glycosyl hydrolase families 5, 30, 39 and 51 domain: Alpha-l-arabinofuranosidase species: Clostridium thermocellum [TaxId: 1515]
Probab=92.28 E-value=0.26 Score=40.24 Aligned_cols=64 Identities=5% Similarity=0.005 Sum_probs=41.5
Q ss_pred CCCcEEEEEEecC-CCceeEEEEceecCCCCCCceEEEEccCCcccc------------------ccccceEEEEEcCCC
Q 012852 379 SGHRLVVALWNRC-PKAETITAQWDALGLESSTKVSVRDLWQHKQVT------------------GDAVSSFGAQVDAHD 439 (455)
Q Consensus 379 ~dg~~avalfN~~-~~~~~iti~l~~LGL~~~~~~~vrDlW~g~~~~------------------g~~~~~l~~~L~pH~ 439 (455)
.+|..+|.+.|++ +++.++++++..++... ..+++ +.++.++. ....+.++++||||+
T Consensus 48 ~~g~l~i~vVNrs~~e~~~v~i~l~g~~~~~--~~e~~-~L~~~d~~a~NT~e~~~vvp~~~~~~~~~~~~l~~tlPp~S 124 (131)
T d2c7fa1 48 EKEEVTIFAVNRNIHEDIVLVSDVRGMKDYR--LLEHI-VLEHQDLKIRNSVNGEEVYPKNSDKSSFDDGILTSMLRRAS 124 (131)
T ss_dssp TTTEEEEEEECCCTTSCEEEEEEESCC---C--EEEEE-EECCSCTTCBCBTTBCSSCCEECCC--CCSSEEEEEECSSC
T ss_pred CCCEEEEEEEECCCCcCEEEEEEecCCCccc--EEEEE-EEeCCChhhhccCCCCcEecCcCcceEEeCCEEEEEECCCE
Confidence 3578999999998 67889999887654322 22222 22332210 112467899999999
Q ss_pred EEEEEE
Q 012852 440 CQMYIF 445 (455)
Q Consensus 440 ~~ll~l 445 (455)
..++||
T Consensus 125 ~~virL 130 (131)
T d2c7fa1 125 WNVIRI 130 (131)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999997
|
| >d1m53a1 b.71.1.1 (A:521-598) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Glycosyl hydrolase domain superfamily: Glycosyl hydrolase domain family: alpha-Amylases, C-terminal beta-sheet domain domain: Isomaltulose synthase PalI species: Klebsiella sp., lx3 [TaxId: 576]
Probab=92.12 E-value=0.28 Score=35.93 Aligned_cols=65 Identities=11% Similarity=0.086 Sum_probs=40.5
Q ss_pred eeEEEEEcCCCcEEEEEEecCCCceeEEEEceecCCCCCCceEEEE-ccCCccccccccceEEEEEcCCCEEEEEEE
Q 012852 371 LQVWVGPLSGHRLVVALWNRCPKAETITAQWDALGLESSTKVSVRD-LWQHKQVTGDAVSSFGAQVDAHDCQMYIFT 446 (455)
Q Consensus 371 ~~vw~~~l~dg~~avalfN~~~~~~~iti~l~~LGL~~~~~~~vrD-lW~g~~~~g~~~~~l~~~L~pH~~~ll~lt 446 (455)
.=++.|... +..++++.|.++++++++++.. +. ..+ +.+.... ......-+++|.|.+++|++|.
T Consensus 13 v~aY~R~~~-~~~~lVv~NfS~~~~~~~lp~~---~~------~~~~ll~n~~~-~~~~~~~~l~L~PyE~~vy~l~ 78 (78)
T d1m53a1 13 VYAYTRTLG-NERYLVVVNFKEYPVRYTLPAN---DA------IEEVVIDTQQQ-AAAPHSTSLSLSPWQAGVYKLR 78 (78)
T ss_dssp EEEEEEEET-TEEEEEEEECSSSCEEEECCTT---CC------EEEEEEESCSS-CCCCCSSEEEECTTCEEEEEEC
T ss_pred EEEEEEEcC-CeEEEEEEeCCCCCEEEECCcc---cc------ccEEEEECCCC-ccccccCceEECCCEEEEEEEC
Confidence 334566664 4679999999999988876532 11 122 3333221 1112233688999999999973
|
| >d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Glycosyltrehalose trehalohydrolase, central domain species: Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]
Probab=91.84 E-value=0.52 Score=44.19 Aligned_cols=128 Identities=16% Similarity=0.178 Sum_probs=81.4
Q ss_pred CCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCC-----cccCCCCCC--CCHHHHHHHHHhcCCeEEEEec
Q 012852 105 ISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQ-----LVPDTITFP--SGIKALADYVHGKGLKLGIYSD 177 (455)
Q Consensus 105 i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~-----~~~d~~~FP--~Gl~~l~~~v~~~G~k~Glw~~ 177 (455)
=|-+.|.+.++.+ +++|++.|.|=--+........|. ..+|+ +|- +.||.|++.+|++||++=|=+.
T Consensus 26 Gd~~gi~~~ldyi-----~~LGv~~i~l~Pv~~~~~~~~~GY~~~d~~~vd~-~~Gt~~dlk~lv~~~h~~gi~VilD~V 99 (400)
T d1eh9a3 26 GTFEGVIRKLDYL-----KDLGITAIEIMPIAQFPGKRDWGYDGVYLYAVQN-SYGGPEGFRKLVDEAHKKGLGVILDVV 99 (400)
T ss_dssp CSHHHHHHTHHHH-----HHHTCCEEEECCCBCCSSSCCCSTTCCCTTCBCS-TTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHhHHH-----HHcCCCEEEeCCcCcCCCCCCCCCCCCCCCCcCc-ccCCHHHHHHHHHHHHhcCCceeeecc
Confidence 4678888888888 779999999843332211111122 23554 343 2499999999999999877554
Q ss_pred CCc----------------------------cccCCCCcccccHHhHHHHH-HhcCCcEEEeecCCCC-CCCccchhHHH
Q 012852 178 AGV----------------------------FTCQVRPGSLFHEKDDAPLF-ASWGVDYLKYDNCFNL-GIEPKKRYPPM 227 (455)
Q Consensus 178 pg~----------------------------~~c~~~Pg~~~~~~~~~~~~-~~wGidylK~D~~~~~-~~~~~~~y~~m 227 (455)
+.- ..+..+|.+++++...++.+ .+.|||.+.+|....- ...+......+
T Consensus 100 ~NH~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~np~v~~~l~d~~~~Wl~~~gvDGfR~Daa~~i~~~~~~~~~~~~ 179 (400)
T d1eh9a3 100 YNHVGPEGNYMVKLGPYFSQKYKTPWGLTFNFDDAESDEVRKFILENVEYWIKEYNVDGFRLDAVHAIIDTSPKHILEEI 179 (400)
T ss_dssp CSCCCSSSCCHHHHSCCSCSSCCCSSSCCCCSSSTTHHHHHHHHHHHHHHHHHHSCCCCEEETTGGGCCCCSSSCHHHHH
T ss_pred cccccCCCcchhhhccccccccccccccccccccccccHHHHHHHHHHHHHHhhcccceEEeechhhhcchhhhhhHHHH
Confidence 420 00123577888887777764 5889999999975432 12234455677
Q ss_pred HHHHHhcCCCe
Q 012852 228 RDALNETGCSI 238 (455)
Q Consensus 228 ~~AL~~~G~~i 238 (455)
.+.+.+.++-+
T Consensus 180 ~~~~~~~~~~~ 190 (400)
T d1eh9a3 180 ADVVHKYNRIV 190 (400)
T ss_dssp HHHHHHTTCCE
T ss_pred HHHHhhhhhhh
Confidence 77777665433
|
| >d1qw9a1 b.71.1.2 (A:5-17,A:385-501) Alpha-l-arabinofuranosidase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Glycosyl hydrolase domain superfamily: Glycosyl hydrolase domain family: Composite domain of glycosyl hydrolase families 5, 30, 39 and 51 domain: Alpha-l-arabinofuranosidase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=91.55 E-value=0.32 Score=39.68 Aligned_cols=66 Identities=8% Similarity=-0.029 Sum_probs=42.1
Q ss_pred CCcEEEEEEecC-CCceeEEEEceecCCCCCCceEEE-----EccCCccc-----c-------ccccceEEEEEcCCCEE
Q 012852 380 GHRLVVALWNRC-PKAETITAQWDALGLESSTKVSVR-----DLWQHKQV-----T-------GDAVSSFGAQVDAHDCQ 441 (455)
Q Consensus 380 dg~~avalfN~~-~~~~~iti~l~~LGL~~~~~~~vr-----DlW~g~~~-----~-------g~~~~~l~~~L~pH~~~ 441 (455)
+|..+|.++|++ +++.++++++..++... ..+++ |+.+..+. . ....+.++++||||+..
T Consensus 47 ~~~l~v~vVNr~~~e~~~v~i~l~g~~~~~--~~~~~~L~~~d~~a~NT~~~p~vv~~~~~~~~~~~~~l~~~lPp~S~t 124 (130)
T d1qw9a1 47 KEEVTIFAVNRDMEDALLLECDVRSFEDYR--VIEHIVLEHDNVKQTNSAQSSPVVPHRNGDAQLSDRKVSATLPKLSWN 124 (130)
T ss_dssp TTEEEEEEEECCSSCCEEEEEECTTSCSCE--EEEEEEECCSCTTCBCCSSCCCCCCBSCCCCEEETTEEEEEECSSEEE
T ss_pred CCEEEEEEEECCCCcCeEEEEEccCCCccc--eEEEEEEeCCCccccccCCCCceecCcCcceEEeCCEEEEEECCcEEE
Confidence 467889999997 56888888887554332 22222 22221111 0 11236789999999999
Q ss_pred EEEEEe
Q 012852 442 MYIFTP 447 (455)
Q Consensus 442 ll~ltp 447 (455)
++||.+
T Consensus 125 virLkk 130 (130)
T d1qw9a1 125 VIRLGK 130 (130)
T ss_dssp EEEEEC
T ss_pred EEEEcC
Confidence 999863
|
| >d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Plant alpha-amylase species: Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]
Probab=91.19 E-value=0.46 Score=43.22 Aligned_cols=66 Identities=21% Similarity=0.196 Sum_probs=44.1
Q ss_pred CCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCC-----cccCCCCCCC--CHHHHHHHHHhcCCeEEEEec
Q 012852 105 ISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQ-----LVPDTITFPS--GIKALADYVHGKGLKLGIYSD 177 (455)
Q Consensus 105 i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~-----~~~d~~~FP~--Gl~~l~~~v~~~G~k~Glw~~ 177 (455)
-+-..|.+.++.+ +++|++.|.|=-= +.. ....|. ..+|+.+|-+ .++.|++.+|++||++-+=+-
T Consensus 18 g~~~~i~~kLdyl-----~~lGv~~i~L~Pi-~~~-~~~~gY~~~d~~~id~~~~G~~~~f~~lv~~~H~~gi~VilD~V 90 (347)
T d1ht6a2 18 GWYNMMMGKVDDI-----AAAGVTHVWLPPP-SHS-VSNEGYMPGRLYDIDASKYGNAAELKSLIGALHGKGVQAIADIV 90 (347)
T ss_dssp CHHHHHHTTHHHH-----HHTTCCEEEECCC-SCB-SSTTSSSBCCTTCGGGCTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHhHHHH-----HHcCCCEEEECCC-CcC-CCCCCCCccCcCcCCcccCCCHHHHHHHHHHHhhcceEEeeecc
Confidence 3468888889988 6789999887432 111 111122 3456556642 489999999999999876553
|
| >d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltogenic amylase, central domain species: Thermoactinomyces vulgaris, TVAII [TaxId: 2026]
Probab=90.67 E-value=0.39 Score=44.88 Aligned_cols=129 Identities=17% Similarity=0.154 Sum_probs=79.4
Q ss_pred cCCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCC---CCCCCCCcccCCCCCC--CCHHHHHHHHHhcCCeEEEEec
Q 012852 103 CNISETIIKETADALVSTGLAELGYDHVNIDDCWSSP---LRDLKGQLVPDTITFP--SGIKALADYVHGKGLKLGIYSD 177 (455)
Q Consensus 103 ~~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~---~rd~~G~~~~d~~~FP--~Gl~~l~~~v~~~G~k~Glw~~ 177 (455)
+.=|-..|.+.++.+ +++|++.|.|=-=+... +-+......+|+ +|- +.++.|++.+|++||++-+=+-
T Consensus 48 ~~G~~~gi~~kLdyl-----~~lGi~~I~l~Pv~~~~~~~gY~~~~~~~vd~-~~Gt~~d~~~lv~~~H~~Gi~vilD~V 121 (382)
T d1wzla3 48 YGGDLKGVIDRLPYL-----EELGVTALYFTPIFASPSHHKYDTADYLAIDP-QFGDLPTFRRLVDEAHRRGIKIILDAV 121 (382)
T ss_dssp CCCCHHHHHHTHHHH-----HHHTCCEEEECCCEECSSSSCCSCSEEEEECT-TTCCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CCcCHHHHHHhhHHH-----HHCCCCEEEECCcCCCCcccCCcccccccccc-CCCCHHHHHHHHHHHHhcccceEeeee
Confidence 345788888888998 67899888872111000 000011123443 332 3599999999999999987432
Q ss_pred CCc--------------------------ccc------------------------CCCCcccccHHhHHHHHHhcCCcE
Q 012852 178 AGV--------------------------FTC------------------------QVRPGSLFHEKDDAPLFASWGVDY 207 (455)
Q Consensus 178 pg~--------------------------~~c------------------------~~~Pg~~~~~~~~~~~~~~wGidy 207 (455)
+.- ..+ ..+|.+++++...+..+.+.|||.
T Consensus 122 ~NH~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLn~~n~~v~~~~~~~~~~w~~~gvDG 201 (382)
T d1wzla3 122 FNHAGDQFFAFRDVLQKGEQSRYKDWFFIEDFPVSKTSRTNYETFAVQVPAMPKLRTENPEVKEYLFDVARFWMEQGIDG 201 (382)
T ss_dssp CSBCCTTSHHHHHHHHHGGGCTTGGGBCBSSSSCCCSSCCSBCBSSSSCTTCBBBCTTSHHHHHHHHHHHHHHHHTTCCE
T ss_pred ecccccccccccchhhcCccccccccccccccccccCCCCcccccccccccCCccCCCCHHHHHHHHHHHHHHHHcCCCc
Confidence 210 000 134567777777777778899999
Q ss_pred EEeecCCCCCCCccchhHHHHHHHHhcCCCeeE
Q 012852 208 LKYDNCFNLGIEPKKRYPPMRDALNETGCSIFY 240 (455)
Q Consensus 208 lK~D~~~~~~~~~~~~y~~m~~AL~~~G~~i~~ 240 (455)
+.+|....- .....+.+..++++..+..++
T Consensus 202 fR~D~~~~~---~~~~~~~~~~~~~~~~p~~~~ 231 (382)
T d1wzla3 202 WRLDVANEV---DHAFWREFRRLVKSLNPDALI 231 (382)
T ss_dssp EEETTGGGS---CHHHHHHHHHHHHHHCTTCEE
T ss_pred eeecchhhc---chhhhhHHHHHHHhhCCceEE
Confidence 999986433 234445666666666555443
|
| >d1hl9a2 c.1.8.11 (A:7-356) Putative alpha-L-fucosidase, catalytic domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Putative alpha-L-fucosidase, catalytic domain domain: Putative alpha-L-fucosidase, catalytic domain species: Thermotoga maritima [TaxId: 2336]
Probab=90.19 E-value=1.3 Score=41.85 Aligned_cols=126 Identities=15% Similarity=0.071 Sum_probs=72.1
Q ss_pred CCCHHHHHHHHHHHHHcCCcccCceEEEec----CCcCCCCCCCCCCccc-CCCCCC-CCHHHHHHHHHhcCCeEEEEec
Q 012852 104 NISETIIKETADALVSTGLAELGYDHVNID----DCWSSPLRDLKGQLVP-DTITFP-SGIKALADYVHGKGLKLGIYSD 177 (455)
Q Consensus 104 ~i~e~~i~~~ad~~~~~gl~~~G~~~~~iD----DGW~~~~rd~~G~~~~-d~~~FP-~Gl~~l~~~v~~~G~k~Glw~~ 177 (455)
++|.+...+.|. ++|.+|+||= ||..-- -....++.+ + .-+. +=+++|++.+|+.|||||+|+.
T Consensus 98 ~fDa~~Wv~~ak--------~aGaky~vlTaKHHDGF~Lw-~S~~t~~n~~~-~~~~rDiv~el~~A~rk~Glk~G~YyS 167 (350)
T d1hl9a2 98 KWDPQEWADLFK--------KAGAKYVIPTTKHHDGFCLW-GTKYTDFNSVK-RGPKRDLVGDLAKAVREAGLRFGVYYS 167 (350)
T ss_dssp TCCHHHHHHHHH--------HTTCSEEEEEEECTTCCBSS-CCSSCSCBTTT-STTCSCHHHHHHHHHHHTTCEECEEEC
T ss_pred cCCHHHHHHHHH--------HcCCCEEEEEEEecCCcccC-CCCCCCCCCcC-CCCCCchHHHHHHHHHhcCCceeEEec
Confidence 466666655554 4688899983 343210 001223322 2 1111 2389999999999999999998
Q ss_pred CCc-cccC------------CCCcccccH----HhHHHHHHhcCCcEEEeecCCCCCCCccchhHHHHHHHHhcCCCeeE
Q 012852 178 AGV-FTCQ------------VRPGSLFHE----KDDAPLFASWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFY 240 (455)
Q Consensus 178 pg~-~~c~------------~~Pg~~~~~----~~~~~~~~~wGidylK~D~~~~~~~~~~~~y~~m~~AL~~~G~~i~~ 240 (455)
+.. .... ..+....|. .++.+++..+|.+.+=+|...... ....+..+.+.+....+.+++
T Consensus 168 ~~~dw~~~~~~~~~~~~~~~~~~~~~~y~~~~~~Ql~EL~~~Y~p~~~w~D~~~~~~--~~~~~~~~~~~i~~~qp~~~i 245 (350)
T d1hl9a2 168 GGLDWRFTTEPIRYPEDLSYIRPNTYEYADYAYKQVMELVDLYLPDVLWNDMGWPEK--GKEDLKYLFAYYYNKHPEGSV 245 (350)
T ss_dssp CSCCTTSCCSCCCSGGGGGTCSCCSHHHHHHHHHHHHHHHHHHCCSCEEECSCCCGG--GTTHHHHHHHHHHHHCTTCCB
T ss_pred cccccccccCCCCCcchhcccCccchHHHHHHHHHHHHHHhccCCceEEeccccccc--chhhHHHHHHHHHHhCCCCcc
Confidence 642 1111 111122222 456677889999999888753321 233444555556666666655
Q ss_pred e
Q 012852 241 S 241 (455)
Q Consensus 241 ~ 241 (455)
+
T Consensus 246 ~ 246 (350)
T d1hl9a2 246 N 246 (350)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d1g5aa1 b.71.1.1 (A:555-628) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Glycosyl hydrolase domain superfamily: Glycosyl hydrolase domain family: alpha-Amylases, C-terminal beta-sheet domain domain: Amylosucrase species: Neisseria polysaccharea [TaxId: 489]
Probab=89.70 E-value=0.45 Score=34.94 Aligned_cols=54 Identities=19% Similarity=0.110 Sum_probs=40.5
Q ss_pred EEEEEEecCCCceeEEEEceecCCCCCCceEEEEccCCccccccccceEEEEEcCCCEEEEEE
Q 012852 383 LVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQVDAHDCQMYIF 445 (455)
Q Consensus 383 ~avalfN~~~~~~~iti~l~~LGL~~~~~~~vrDlW~g~~~~g~~~~~l~~~L~pH~~~ll~l 445 (455)
.++++.|.+++++.++++. +.+.+ ...+|+-+|+.. . ..+ .++|+|++..=|++
T Consensus 20 ~ilvi~NfS~~~Q~v~l~~--l~~~g---~~~~DLlsg~~~-~-~~~--~ltL~PYq~~WL~~ 73 (74)
T d1g5aa1 20 ALLAFGNFSEYPQTVTAHT--LQAMP---FKAHDLIGGKTV-S-LNQ--DLTLQPYQVMWLEI 73 (74)
T ss_dssp TEEEEEECSSSCEEECTTT--TTTSC---SEEEETTTCCEE-E-CSS--CEEECTTCEEEEEC
T ss_pred eEEEEEeCCCCCEEEEcch--hhhcC---CCcchhhCCccc-C-CcC--cEEECCceEEEEEc
Confidence 4899999999999886654 44433 356899999876 2 344 37899999988876
|
| >d1uoka1 b.71.1.1 (A:480-558) Oligo-1,6-glucosidase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Glycosyl hydrolase domain superfamily: Glycosyl hydrolase domain family: alpha-Amylases, C-terminal beta-sheet domain domain: Oligo-1,6-glucosidase species: Bacillus cereus [TaxId: 1396]
Probab=89.33 E-value=1 Score=32.76 Aligned_cols=66 Identities=8% Similarity=0.043 Sum_probs=39.2
Q ss_pred eEEEEEcCCCcEEEEEEecCCCceeEEEEceecCCCCCCceEEEEccCCccccccccceEEEEEcCCCEEEEEEE
Q 012852 372 QVWVGPLSGHRLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQHKQVTGDAVSSFGAQVDAHDCQMYIFT 446 (455)
Q Consensus 372 ~vw~~~l~dg~~avalfN~~~~~~~iti~l~~LGL~~~~~~~vrDlW~g~~~~g~~~~~l~~~L~pH~~~ll~lt 446 (455)
=++.|... ++.++++.|.++++++++++-. +... .+ +-+-+... ......-+++|+|.++++|+|.
T Consensus 14 ~aY~R~~~-~~~~lVv~NfS~~~~~~~lp~~-~~~~---~~--~~l~~n~~--~~~~~~~~~~L~Pye~~v~~lk 79 (79)
T d1uoka1 14 FAYVRTYG-VEKLLVIANFTAEECIFELPED-ISYS---EV--ELLIHNYD--VENGPIENITLRPYEAMVFKLK 79 (79)
T ss_dssp EEEEEEET-TEEEEEEEECSSSCEEEECCTT-CCCS---CE--EEEEESSC--CCCCCCSEEEECTTCEEEEEEC
T ss_pred EEEEEECC-CcEEEEEEeCCCCCEEEECCcc-cccC---cc--eEEEeCCC--CCCCCcccEEECCceEEEEEEC
Confidence 34466654 4679999999999988876532 1111 12 22322211 1111223578999999999973
|
| >d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Amylosucrase species: Neisseria polysaccharea [TaxId: 489]
Probab=88.56 E-value=1.1 Score=44.73 Aligned_cols=143 Identities=13% Similarity=0.120 Sum_probs=86.6
Q ss_pred ceEEechhhhCcCCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCC-CCCCCCc-----ccCCCCCC--CCHHHHHH
Q 012852 92 QMGWNSWNFFACNISETIIKETADALVSTGLAELGYDHVNIDDCWSSPL-RDLKGQL-----VPDTITFP--SGIKALAD 163 (455)
Q Consensus 92 P~gwnSW~~~~~~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~-rd~~G~~-----~~d~~~FP--~Gl~~l~~ 163 (455)
.+|...+-.++ .=|-+.|.+.++.+ +++|+++|.|==-..... ....|.. .+|| +|- +.|+.||+
T Consensus 98 ~~~~~~y~~~f-gGDl~Gi~~kLdYL-----k~LGVt~I~L~Pi~~~p~~~sd~GY~v~dy~~Vdp-~lGt~edl~~Lv~ 170 (554)
T d1g5aa2 98 QVGGVCYVDLF-AGDLKGLKDKIPYF-----QELGLTYLHLMPLFKCPEGKSDGGYAVSSYRDVNP-ALGTIGDLREVIA 170 (554)
T ss_dssp CCEEEECHHHH-HSSHHHHHTTHHHH-----HHHTCSEEEECCCBCCCSSCSTTTTSCSCSSSBCT-TTCCHHHHHHHHH
T ss_pred ceeEEEecccc-CcCHHHHHHhhHHH-----HHcCCCEEEECCCCCCCCCCCCCCcCcccCCCCCc-ccCCHHHHHHHHH
Confidence 45554443322 23688889999998 678999988733222111 1112333 3554 453 25999999
Q ss_pred HHHhcCCeEEEEecCC----------------------------c-------------------cc-----------c--
Q 012852 164 YVHGKGLKLGIYSDAG----------------------------V-------------------FT-----------C-- 183 (455)
Q Consensus 164 ~v~~~G~k~Glw~~pg----------------------------~-------------------~~-----------c-- 183 (455)
.+|++||++-|=+-+. . .. +
T Consensus 171 ~aH~rGI~VilD~V~NHts~~h~w~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 250 (554)
T d1g5aa2 171 ALHEAGISAVVDFIFNHTSNEHEWAQRCAAGDPLFDNFYYIFPDRRMPDQYDRTLREIFPDQHPGGFSQLEDGRWVWTTF 250 (554)
T ss_dssp HHHHTTCEEEEEECCSEEETTSHHHHHHHTTCGGGTTSBCEESSSHHHHHHTTTCCCSSTTTCSTTEEECTTSCEEECSS
T ss_pred HHHHCCCEEEEEECcCCCCCCccchhhhhccCCccccceEEcCCCCCCccccCCCcccCCCCCCcceeecCCCceeeccc
Confidence 9999999987622110 0 00 0
Q ss_pred --------CCCCcccccHHhHHHHHHhcCCcEEEeecCCCCCC-------C---ccchhHHHHHHHHhcCCCeeEe
Q 012852 184 --------QVRPGSLFHEKDDAPLFASWGVDYLKYDNCFNLGI-------E---PKKRYPPMRDALNETGCSIFYS 241 (455)
Q Consensus 184 --------~~~Pg~~~~~~~~~~~~~~wGidylK~D~~~~~~~-------~---~~~~y~~m~~AL~~~G~~i~~~ 241 (455)
..+|.++.++...+..+.+.|||.+.+|....... . .....+.++.+++...+.+++.
T Consensus 251 ~~~~~dln~~np~V~~~~~~~~~~w~~~gvDGfRlDa~~~~~~~~~~~~~n~p~~~~~~~~~~~~~~~~~p~~~l~ 326 (554)
T d1g5aa2 251 NSFQWDLNYSNPWVFRAMAGEMLFLANLGVDILRMDAVAFIWKQMGTSCENLPQAHALIRAFNAVMRIAAPAVFFK 326 (554)
T ss_dssp STTEEEBCTTSHHHHHHHHHHHHHHHTTTCSEEEETTGGGSCCCTTSCSSSCHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred CCcccccccCCHHHHHHHHhhhhhhhhccccccccccchhhccccccccccCchhhHHHHHHHHHHhhhCCCceee
Confidence 13566777777777888899999999998643211 0 1123356777777777766554
|
| >d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Halothermothrix orenii [TaxId: 31909]
Probab=87.66 E-value=1.3 Score=41.00 Aligned_cols=133 Identities=17% Similarity=0.211 Sum_probs=77.5
Q ss_pred CHHHHHHHHHHHH---HcCCcccCceEEEecCCcCCC---CCCCCCCcccCCCCCC--CCHHHHHHHHHhcCCeEEEEec
Q 012852 106 SETIIKETADALV---STGLAELGYDHVNIDDCWSSP---LRDLKGQLVPDTITFP--SGIKALADYVHGKGLKLGIYSD 177 (455)
Q Consensus 106 ~e~~i~~~ad~~~---~~gl~~~G~~~~~iDDGW~~~---~rd~~G~~~~d~~~FP--~Gl~~l~~~v~~~G~k~Glw~~ 177 (455)
|-..|.+-.+.+. ...++++|++.|.|==-.... +.+...-..+|+ +|- +.++.||+.+|++||++-+=+.
T Consensus 25 d~~g~~~kLdyl~~~~~~~i~~LGv~~i~l~Pi~~~~~~~GY~~~d~~~vd~-~~G~~~dlk~lv~~~H~~Gi~VilD~V 103 (409)
T d1wzaa2 25 DLKGIIEKLDYLNDGDPETIADLGVNGIWLMPIFKSPSYHGYDVTDYYKINP-DYGTLEDFHKLVEAAHQRGIKVIIDLP 103 (409)
T ss_dssp CHHHHHHTHHHHCCSCTTCCSSCCCSEEEECCCEECSSSSCCSCSEEEEECG-GGCCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CHHHHHHhccccccccccHHhhcCccEEEECCCCCCCCCCCcCcccCCCcCc-ccCCHHHHHHHHHHHHhcCCEEEEecc
Confidence 4567777777762 123578999999773211110 001111124553 343 2599999999999999876554
Q ss_pred CCc------------------------cc------------------------------c------CCCCcccccHHhHH
Q 012852 178 AGV------------------------FT------------------------------C------QVRPGSLFHEKDDA 197 (455)
Q Consensus 178 pg~------------------------~~------------------------------c------~~~Pg~~~~~~~~~ 197 (455)
+.- .. + ..+|.+++++...+
T Consensus 104 ~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~n~~vr~~~~~~~ 183 (409)
T d1wzaa2 104 INHTSERHPWFLKASRDKNSEYRDYYVWAGPDTDTKETKLDGGRVWHYSPTGMYYGYFWSGMPDLNYNNPEVQEKVIGIA 183 (409)
T ss_dssp CSBCCTTSHHHHHHHTCTTCTTGGGBCBCCSCCCCCBCSSSCBCSEEEETTEEEECSSCTTSCBBCTTSHHHHHHHHHHH
T ss_pred cccccccCcchhhhhccccccccccccccccccccCccccCCCccccccccccccccCCCCCcccccccHHHHHHHHHHH
Confidence 310 00 0 13456777888788
Q ss_pred HHHHhcCCcEEEeecCCCCCCC-----ccchhHHHHHHHHhcCCCeeE
Q 012852 198 PLFASWGVDYLKYDNCFNLGIE-----PKKRYPPMRDALNETGCSIFY 240 (455)
Q Consensus 198 ~~~~~wGidylK~D~~~~~~~~-----~~~~y~~m~~AL~~~G~~i~~ 240 (455)
+.+.+.|||.+.+|....-... .....+.+++++++.. ++++
T Consensus 184 ~~wi~~gVDGfR~D~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 230 (409)
T d1wzaa2 184 KYWLKQGVDGFRLDGAMHIFPPAQYDKNFTWWEKFRQEIEEVK-PVYL 230 (409)
T ss_dssp HHHHHTTCCEEEEECCCTTSCGGGTTHHHHHHHHHHHHHTTTS-CCEE
T ss_pred HHHHHcCCCeecccchhhcccchhccchhHHHHHHHHhhccCC-CcEE
Confidence 8888889999999987653221 1223345566555443 4443
|
| >d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclodextrin glycosyltransferase species: Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]
Probab=87.06 E-value=1.1 Score=42.14 Aligned_cols=123 Identities=15% Similarity=0.127 Sum_probs=75.9
Q ss_pred CCHHHHHHHHHHHHHcCCcccCceEEEecCCcC------CCC-CCCCCCc-----ccCCCCCC--CCHHHHHHHHHhcCC
Q 012852 105 ISETIIKETADALVSTGLAELGYDHVNIDDCWS------SPL-RDLKGQL-----VPDTITFP--SGIKALADYVHGKGL 170 (455)
Q Consensus 105 i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~------~~~-rd~~G~~-----~~d~~~FP--~Gl~~l~~~v~~~G~ 170 (455)
=|-+.|.+.++.+ +++|++.|.|=-=.. ... ....|.. .+|+ +|- +.++.|++.+|++||
T Consensus 49 Gd~~gi~~kLdyl-----~~LGv~~I~L~Pi~~~~~~~~~~~~~~~~gY~~~d~~~id~-~~Gt~~d~k~Lv~~~H~~Gi 122 (407)
T d1qhoa4 49 GDLEGVRQKLPYL-----KQLGVTTIWLSPVLDNLDTLAGTDNTGYHGYWTRDFKQIEE-HFGNWTTFDTLVNDAHQNGI 122 (407)
T ss_dssp CCHHHHHHTHHHH-----HHHTCCEEEECCCEEECSSCSSTTCCCTTSCSEEEEEEECT-TTCCHHHHHHHHHHHHHTTC
T ss_pred cCHHHHHHHHHHH-----HHcCCCEEEeCccccCCcccCCCCCCCCCceeeeecCCCCC-CCCCHHHHHHHHHHhhhccc
Confidence 4788888889998 778999988721110 000 0011222 3553 342 249999999999999
Q ss_pred eEEEEecCC----------------------cc--------c---------------------c--------------CC
Q 012852 171 KLGIYSDAG----------------------VF--------T---------------------C--------------QV 185 (455)
Q Consensus 171 k~Glw~~pg----------------------~~--------~---------------------c--------------~~ 185 (455)
++=|=+.+. .. . | ..
T Consensus 123 ~VilD~V~NH~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~ 202 (407)
T d1qhoa4 123 KVIVDFVPNHSTPFKANDSTFAEGGALYNNGTYMGNYFDDATKGYFHHNGDISNWDDRYEAQWKNFTDPAGFSLADLSQE 202 (407)
T ss_dssp EEEEEECTTEEEEEBTTBTTSTTTTCEEETTEEEECSSSCTTTCCBCCSCBCSCTTCHHHHHHSBCEETTTEEEEEBCTT
T ss_pred ceeeccccccccCCccccccccccCcccccCccccccccccccccccccCCCCCcccccccccccccCCccccCchhhhh
Confidence 987722110 00 0 0 12
Q ss_pred CCcccccHHhHHHHHHhcCCcEEEeecCCCCCCCccchhHHHHHHHHhcCC
Q 012852 186 RPGSLFHEKDDAPLFASWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGC 236 (455)
Q Consensus 186 ~Pg~~~~~~~~~~~~~~wGidylK~D~~~~~~~~~~~~y~~m~~AL~~~G~ 236 (455)
+|.+++++...++.+.+.|||.+.+|....- +.+..+.+.+++++...
T Consensus 203 n~~v~~~~~~~~~~w~~~gvDGfR~D~~~~~---~~~f~~~~~~~i~~~~~ 250 (407)
T d1qhoa4 203 NGTIAQYLTDAAVQLVAHGADGLRIDAVKHF---NSGFSKSLADKLYQKKD 250 (407)
T ss_dssp SHHHHHHHHHHHHHHHHTTCCEEEETTGGGS---CHHHHHHHHHHHHHHCC
T ss_pred hhhHHHHHHHhHHHHhhhccccccccccccc---chhHHHHHHHHHHhccC
Confidence 4556677777777788999999999986432 23344667777766533
|
| >d1nofa1 b.71.1.2 (A:31-43,A:321-413) Glycosyl hydrolase family 5 xylanase {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Glycosyl hydrolase domain superfamily: Glycosyl hydrolase domain family: Composite domain of glycosyl hydrolase families 5, 30, 39 and 51 domain: Glycosyl hydrolase family 5 xylanase species: Erwinia chrysanthemi [TaxId: 556]
Probab=86.33 E-value=5.1 Score=30.99 Aligned_cols=68 Identities=7% Similarity=0.149 Sum_probs=43.5
Q ss_pred eeEEEEEcCCCcEEEEEEecCCCceeEEEEceecCCCCCCceEEEEccC-Cc--ccc--c----cccceEEEEEcCCCEE
Q 012852 371 LQVWVGPLSGHRLVVALWNRCPKAETITAQWDALGLESSTKVSVRDLWQ-HK--QVT--G----DAVSSFGAQVDAHDCQ 441 (455)
Q Consensus 371 ~~vw~~~l~dg~~avalfN~~~~~~~iti~l~~LGL~~~~~~~vrDlW~-g~--~~~--g----~~~~~l~~~L~pH~~~ 441 (455)
..+=+-...||.++|++.|.++.++.+++++...+.. +++ .|. .+ ++. + ...+.++++|||++..
T Consensus 28 v~vSAy~n~dgk~vvV~iN~~~~~~~~~l~l~g~~~~-----~~~-~y~Ts~~~nl~~~~~~~~~~~g~~~~tlParSVt 101 (106)
T d1nofa1 28 VHLTAYKNTDGKMVIVAVNTNDSDQMLSLNISNANVT-----KFE-KYSTSASLNVEYGGSSQVDSSGKATVWLNPLSVT 101 (106)
T ss_dssp EEEEEEECTTSCEEEEEEECSSSCEEEEEEEESCCCC-----EEE-EEEESSSCSSEEEEEEECCTTSEEEEEECSSEEE
T ss_pred EEEEEEECCCCCEEEEEEcCCCccEEEEEEcCCCceE-----EEE-EEEeCCccccccccceeeccCCEEEEEECCceEE
Confidence 4444444568899999999999999999888754432 122 222 11 110 0 1246788999999987
Q ss_pred EEE
Q 012852 442 MYI 444 (455)
Q Consensus 442 ll~ 444 (455)
=|.
T Consensus 102 TfV 104 (106)
T d1nofa1 102 TFV 104 (106)
T ss_dssp EEE
T ss_pred EEE
Confidence 664
|
| >d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) species: Pseudomonas stutzeri [TaxId: 316]
Probab=85.84 E-value=1.3 Score=40.42 Aligned_cols=103 Identities=15% Similarity=0.201 Sum_probs=67.3
Q ss_pred HHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCC--------CCC----cccCCCCCC--CCHHHHHHHHHhcCCeE
Q 012852 107 ETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDL--------KGQ----LVPDTITFP--SGIKALADYVHGKGLKL 172 (455)
Q Consensus 107 e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~--------~G~----~~~d~~~FP--~Gl~~l~~~v~~~G~k~ 172 (455)
-..|.+.++.+ +++|++.|-|=--++....+. .|. ..+|+ +|- +.|+.||+.+|++||++
T Consensus 36 ~~~i~~kl~yl-----~~lGv~aIwl~P~~~~~~~~~~~~~~~~~hgY~~~dy~vd~-~~Gt~~df~~LV~~aH~~GI~V 109 (357)
T d1gcya2 36 YNILRQQAATI-----AADGFSAIWMPVPWRDFSSWSDGSKSGGGEGYFWHDFNKNG-RYGSDAQLRQAASALGGAGVKV 109 (357)
T ss_dssp HHHHHHHHHHH-----HHTTCSEEEECCCSCCCCCBC---CCBCCSSTTCSSSCSCS-SSCCHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHH-----HHcCCCEEEeCcCeeCCccCCCCCCCCCCCCcChhhcccCc-cCCCHHHHHHHHHHHHhcCCeE
Confidence 57888889998 779999998865554321110 122 34443 453 25999999999999998
Q ss_pred EEEecCCc------------------c--c---------------c---------CCCCcccccHHhHHH-HHHhcCCcE
Q 012852 173 GIYSDAGV------------------F--T---------------C---------QVRPGSLFHEKDDAP-LFASWGVDY 207 (455)
Q Consensus 173 Glw~~pg~------------------~--~---------------c---------~~~Pg~~~~~~~~~~-~~~~wGidy 207 (455)
=+=+-+.- . . + ..+|.+++++...+. .+.+.|||.
T Consensus 110 IlD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~np~v~~~~~~~~~~~~~~~giDG 189 (357)
T d1gcya2 110 LYDVVPNHMNRGYPDKEINLPAGQGFWRNDCADPGNYPNDCDDGDRFIGGDADLNTGHPQVYGMFRDEFTNLRSQYGAGG 189 (357)
T ss_dssp EEEECCSBCCTTCSSCSCCCCSSSSCBGGGSCCCSSSCBTTBSSCCSTTSTTBBCTTSHHHHHHHHHHHHHHHHHSCEEE
T ss_pred EEEEeccccCCCCCccccccccCCCccccccCCCCCCCCCCCccccccccccccCCCCHHHHHHHHHHHHHHHHhcCCCE
Confidence 76543310 0 0 0 134556667655444 567999999
Q ss_pred EEeecCCC
Q 012852 208 LKYDNCFN 215 (455)
Q Consensus 208 lK~D~~~~ 215 (455)
+.+|....
T Consensus 190 fR~Daa~~ 197 (357)
T d1gcya2 190 FRFDFVRG 197 (357)
T ss_dssp EEESCGGG
T ss_pred EEEeehhc
Confidence 99998743
|
| >d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltogenic amylase, central domain species: Bacillus sp., cyclomaltodextrinase [TaxId: 1409]
Probab=85.62 E-value=3.5 Score=37.76 Aligned_cols=131 Identities=16% Similarity=0.194 Sum_probs=80.9
Q ss_pred CCCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCc-----ccCCCCCC--CCHHHHHHHHHhcCCeEEEEe
Q 012852 104 NISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQL-----VPDTITFP--SGIKALADYVHGKGLKLGIYS 176 (455)
Q Consensus 104 ~i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~-----~~d~~~FP--~Gl~~l~~~v~~~G~k~Glw~ 176 (455)
.=|-+.|.+.++.+ +++|++.|.|=-=+... ...|.. .+|+ +|- +.++.|++.+|++||++-+=+
T Consensus 47 ~Gd~~gi~~kLdyl-----k~LGv~~i~l~Pi~~~~--~~~gY~~~~~~~id~-~~Gt~~df~~lv~~~h~~gi~VilD~ 118 (382)
T d1ea9c3 47 GGDLQGVIDHLDHL-----SKLGVNAVYFTPLFKAT--TNHKYDTEDYFQIDP-QFGDKDTLKKLVDLCHERGIRVLLDA 118 (382)
T ss_dssp CCCHHHHHHTHHHH-----HHHTCSEEEECCCSSCS--SSSTTSCSCTTCCCT-TTCCHHHHHHHHHHHTTTTCEEEEEC
T ss_pred CcCHHHHHHhhHHH-----HhCCCCEEEeCCCccCC--CCCCCCccccccccc-ccCCHHHHHHHHHHHHhhcceEEEee
Confidence 34678888888988 77899998764322221 112222 2332 443 159999999999999987766
Q ss_pred cCCc-----------------------c-----------------cc----------CCCCcccccHHhHHHHH-HhcCC
Q 012852 177 DAGV-----------------------F-----------------TC----------QVRPGSLFHEKDDAPLF-ASWGV 205 (455)
Q Consensus 177 ~pg~-----------------------~-----------------~c----------~~~Pg~~~~~~~~~~~~-~~wGi 205 (455)
.+.- . .+ ..+|.+++++.+.+..+ .+.||
T Consensus 119 V~NH~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~n~~~~~v~~~l~~~~~~w~~~~gv 198 (382)
T d1ea9c3 119 VFNHSGRTFPPFVDVLKNGEKSKYKDWFHIRSLPLEVVDGIPTYDTFAFEPLMPKLNTEHPDVKEYLLKAAEYWIRETGI 198 (382)
T ss_dssp CCSBCCTTTHHHHHHHTTTTTCTTTTSSCBCSSSCCCTTSCCSBCBSSSCTTSBBCCTTSHHHHHHHHHHHHHHHHHHCC
T ss_pred ecccccccCcchhhhhhcCCcccccccccccccccccccCcccccccccccccCccccccHHHHHHHHHHHhhcccceee
Confidence 4310 0 00 12344566665555444 46799
Q ss_pred cEEEeecCCCCCCCccchhHHHHHHHHhcCCCeeEeeCCC
Q 012852 206 DYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYSLCEW 245 (455)
Q Consensus 206 dylK~D~~~~~~~~~~~~y~~m~~AL~~~G~~i~~~~c~~ 245 (455)
|.+.+|....- +.+..+.+.+++++..+++++....|
T Consensus 199 DGfR~Da~~~~---~~~~~~~~~~~~~~~~p~~~~~~e~~ 235 (382)
T d1ea9c3 199 DGWRLDVANEV---SHQFWREFRRVVKQANPDAYILGEVW 235 (382)
T ss_dssp SEEEETTCTTS---CHHHHHHHHHHHHHHCTTCEEEECCC
T ss_pred eEEEecchhhC---chhhhhhhhhhhhhcCCCeeEEeeec
Confidence 99999987543 23455667777777777666554444
|
| >d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Fungal alpha-amylases species: Aspergillus oryzae, Taka-amylase [TaxId: 5062]
Probab=85.21 E-value=1.1 Score=42.13 Aligned_cols=106 Identities=16% Similarity=0.162 Sum_probs=66.9
Q ss_pred CCHHHHHHHHHHHHHcCCcccCceEEEecCCcC------CCCCCCCCCc-----ccCCCCCC--CCHHHHHHHHHhcCCe
Q 012852 105 ISETIIKETADALVSTGLAELGYDHVNIDDCWS------SPLRDLKGQL-----VPDTITFP--SGIKALADYVHGKGLK 171 (455)
Q Consensus 105 i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~------~~~rd~~G~~-----~~d~~~FP--~Gl~~l~~~v~~~G~k 171 (455)
=|-+.|.+.++.+ +++|++.|.|=--+. .......|.. .+|+ +|- +.|+.|++.+|++||+
T Consensus 40 Gd~~gi~~~Ldyl-----~~LGv~~I~L~Pi~~~~~~~~~~~~~~~gY~~~d~~~vd~-~~Gt~~dfk~lv~~~H~~Gi~ 113 (381)
T d2guya2 40 GTWQGIIDKLDYI-----QGMGFTAIWITPVTAQLPQTTAYGDAYHGYWQQDIYSLNE-NYGTADDLKALSSALHERGMY 113 (381)
T ss_dssp BCHHHHHHTHHHH-----HTTTCCEEEECCCEEECCCCBTTBCCTTSCSEEEEEEECT-TSCCHHHHHHHHHHHHHTTCE
T ss_pred cCHHHHHHhHHHH-----HHCCCCEEEeCCCCCCCcccCCCCCCCCCccccccccccc-CCCCHHHHHHHHHHHHhhccc
Confidence 3778888889988 789999998732221 1000111222 3443 343 2499999999999999
Q ss_pred EEEEecCCc---------------------------------------ccc-------------CCCCcccccHHhHHHH
Q 012852 172 LGIYSDAGV---------------------------------------FTC-------------QVRPGSLFHEKDDAPL 199 (455)
Q Consensus 172 ~Glw~~pg~---------------------------------------~~c-------------~~~Pg~~~~~~~~~~~ 199 (455)
+=|=+-+.- ..| ..+|.+++++.+.+..
T Consensus 114 VilD~V~NH~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~n~~v~~~~~~~~~~ 193 (381)
T d2guya2 114 LMVDVVANHMGYDGAGSSVDYSVFKPFSSQDYFHPFCFIQNYEDQTQVEDCWLGDNTVSLPDLDTTKDVVKNEWYDWVGS 193 (381)
T ss_dssp EEEEECCSBCCEEBCGGGCCGGGSBSCCSGGGBCCSCBCCCTTCHHHHHHSBEECSSEEECBBCTTSHHHHHHHHHHHHH
T ss_pred eeeeccccccccccCcccccccccCCCCcccceeccccccccccccccceeeccCCccccchhccccHHHHHHHHHHhhh
Confidence 876543310 000 1246667777666655
Q ss_pred H-HhcCCcEEEeecCCCC
Q 012852 200 F-ASWGVDYLKYDNCFNL 216 (455)
Q Consensus 200 ~-~~wGidylK~D~~~~~ 216 (455)
+ .+.|||.+.+|....-
T Consensus 194 w~~~~giDGfR~D~~~~~ 211 (381)
T d2guya2 194 LVSNYSIDGLRIDTVKHV 211 (381)
T ss_dssp HHHHHTCCEEEETTGGGS
T ss_pred ccccccccceeeehHhhc
Confidence 5 6899999999987543
|
| >d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]
Probab=84.67 E-value=1.2 Score=41.74 Aligned_cols=61 Identities=15% Similarity=0.215 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCC------C--------cccCCCCCC--CCHHHHHHHHHhcCC
Q 012852 107 ETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKG------Q--------LVPDTITFP--SGIKALADYVHGKGL 170 (455)
Q Consensus 107 e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G------~--------~~~d~~~FP--~Gl~~l~~~v~~~G~ 170 (455)
-..|.+.++.+ +++|++.|.|=--.........| . -.+|+ +|- +.++.|++.+|++||
T Consensus 20 ~~gi~~kLdyl-----k~LGvtaI~L~Pi~~~~~~~~~gy~~~~~Y~~~~~~~~~~vd~-~~Gt~~df~~Lv~~~H~~Gi 93 (393)
T d1e43a2 20 WKRLQNDAEHL-----SDIGITAVWIPPAYKGLSQSDNGYGPYDLYDLGEFQQKGTVRT-KYGTKSELQDAIGSLHSRNV 93 (393)
T ss_dssp HHHHHHHHHHH-----HHHTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSC-SSCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHH-----HHcCCCEEEeCcCccCCCCCCCCCCcccCcccccccccCccCC-CCCCHHHHHHHHHHHHHcCC
Confidence 46788889998 77899988883322211111111 1 12442 442 358999999999999
Q ss_pred eEE
Q 012852 171 KLG 173 (455)
Q Consensus 171 k~G 173 (455)
++=
T Consensus 94 ~Vi 96 (393)
T d1e43a2 94 QVY 96 (393)
T ss_dssp EEE
T ss_pred EEE
Confidence 974
|
| >d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus sp. 707 [TaxId: 1416]
Probab=84.24 E-value=2.2 Score=39.77 Aligned_cols=62 Identities=18% Similarity=0.206 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCC--------------cccCCCCCC--CCHHHHHHHHHhcCC
Q 012852 107 ETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQ--------------LVPDTITFP--SGIKALADYVHGKGL 170 (455)
Q Consensus 107 e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~--------------~~~d~~~FP--~Gl~~l~~~v~~~G~ 170 (455)
-..|.+.++.+ +++|++.|.|==-.........|. -.+|+ +|- .-++.||+.+|++||
T Consensus 20 ~~~i~~kLdyL-----~~LGv~aIwL~Pi~~~~~~~~~gY~~~~~yd~~~~~~~~~vd~-~~Gt~~df~~Lv~~aH~~GI 93 (394)
T d2d3na2 20 WNRLNSDASNL-----KSKGITAVWIPPAWKGASQNDVGYGAYDLYDLGEFNQKGTVRT-KYGTRSQLQAAVTSLKNNGI 93 (394)
T ss_dssp HHHHHHHHHHH-----HHHTCCEEEECCCSEESSTTCCSCSEEETTCSSCSCBTTBSSB-TTBCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHH-----HHcCCCEEEECcCccCCCCCCCCCCcccCcccccccccCCcCC-CCCCHHHHHHHHHHHHHCCC
Confidence 36888889998 678998888744332211111121 12443 442 248999999999999
Q ss_pred eEEE
Q 012852 171 KLGI 174 (455)
Q Consensus 171 k~Gl 174 (455)
|+=|
T Consensus 94 kVil 97 (394)
T d2d3na2 94 QVYG 97 (394)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9844
|
| >d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: 4-alpha-glucanotransferase species: Thermotoga maritima [TaxId: 2336]
Probab=83.72 E-value=1.6 Score=40.48 Aligned_cols=103 Identities=19% Similarity=0.199 Sum_probs=68.6
Q ss_pred CHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCC-----cccCCCCCC--CCHHHHHHHHHhcCCeEEEEecC
Q 012852 106 SETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQ-----LVPDTITFP--SGIKALADYVHGKGLKLGIYSDA 178 (455)
Q Consensus 106 ~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~-----~~~d~~~FP--~Gl~~l~~~v~~~G~k~Glw~~p 178 (455)
|-+.|.+.++.+ +++|++.|.|=--+... ...|. ..+|+ +|- +.++.|++.+|++||++=+=+-+
T Consensus 21 d~~gi~~kLdyl-----~~LGv~~I~l~Pi~~~~--~~~GY~~~d~~~vd~-~~Gt~~d~~~lv~~~h~~gi~VilD~V~ 92 (391)
T d1lwha2 21 DFRGLKNAVSYL-----KELGIDFVWLMPVFSSI--SFHGYDVVDFYSFKA-EYGSEREFKEMIEAFHDSGIKVVLDLPI 92 (391)
T ss_dssp CHHHHHHTHHHH-----HHTTCSEEEECCCEECS--SSSCCSCSEEEEECG-GGCCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CHHHHHHhhHHH-----HHcCCCEEEECCCCCCC--CCCCCCccCCCCcCc-ccCCHHHHHHHHHHHHhcCCEEeecccc
Confidence 677788888888 77999999885443321 11232 23453 343 24999999999999998664432
Q ss_pred Cc-------------------------------c-------------------------cc-----CCCCcccccHHhHH
Q 012852 179 GV-------------------------------F-------------------------TC-----QVRPGSLFHEKDDA 197 (455)
Q Consensus 179 g~-------------------------------~-------------------------~c-----~~~Pg~~~~~~~~~ 197 (455)
.- . .| ..+|.+++++...+
T Consensus 93 NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdln~~n~~v~~~i~~~~ 172 (391)
T d1lwha2 93 HHTGFLHTWFQKALKGDPHYRDYYVWANKETDLDERREWDGEKIWHPLEDGRFYRGLFGPFSPDLNYDNPQVFDEMKRLV 172 (391)
T ss_dssp TBCCTTSHHHHHHHTTCHHHHTTBCBCCTTCCTTCBCSSSCCBCEEECTTSCEEECTTCTTSCBBCTTSHHHHHHHHHHH
T ss_pred cccccccccccccccCCccccccceecCCccccCccccCCCCccccccCCCcccccccCCcCCccccccchhhHHHHHHH
Confidence 10 0 00 13455677777777
Q ss_pred HHHHhcCCcEEEeecCCCC
Q 012852 198 PLFASWGVDYLKYDNCFNL 216 (455)
Q Consensus 198 ~~~~~wGidylK~D~~~~~ 216 (455)
+.+.+.|||.+.+|....-
T Consensus 173 ~~w~e~gvDGfR~Daa~~~ 191 (391)
T d1lwha2 173 LHLLDMGVDGFRFDAAKHM 191 (391)
T ss_dssp HHHHHHTCCEEEETTGGGS
T ss_pred HHHhhcCCCcceechHHHH
Confidence 8788999999999987543
|
| >d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclomaltodextrinase, central domain species: Flavobacterium sp. 92 [TaxId: 197856]
Probab=82.42 E-value=2 Score=40.20 Aligned_cols=128 Identities=13% Similarity=-0.009 Sum_probs=78.9
Q ss_pred CCHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCC--CCCC-----cccCCCCCCC--CHHHHHHHHHhcCCeEEEE
Q 012852 105 ISETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRD--LKGQ-----LVPDTITFPS--GIKALADYVHGKGLKLGIY 175 (455)
Q Consensus 105 i~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd--~~G~-----~~~d~~~FP~--Gl~~l~~~v~~~G~k~Glw 175 (455)
=|-..|.+-++.+ +++|++.|.|=-=+...... ..|. ..+|+ +|-. -++.|++.+|++||++=|=
T Consensus 50 Gd~~Gl~~kLdyl-----~~LGv~~I~l~Pi~~~~~~~~~~~GY~~~d~~~vd~-~~Gt~~df~~lv~~~H~~Gi~VilD 123 (422)
T d1h3ga3 50 GDIRGTIDHLDYI-----AGLGFTQLWPTPLVENDAAAYSYHGYAATDHYRIDP-RYGSNEDFVRLSTEARKRGMGLIQD 123 (422)
T ss_dssp CCHHHHHHTHHHH-----HHHTCCEEEECCCEECCCSSCGGGCCSCSEEEEECT-TTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCHHHHHHhHHHH-----HHCCCCEEEeCCcccCCCCCCCCCCCCccccCCccc-ccCCHHHHHHHHHHHHHhCcccccc
Confidence 3778888888988 67899888763322110000 0121 23554 3431 4899999999999998775
Q ss_pred ecCCcc-----------------------------c--------------------c-------CCCCcccccHHhHHHH
Q 012852 176 SDAGVF-----------------------------T--------------------C-------QVRPGSLFHEKDDAPL 199 (455)
Q Consensus 176 ~~pg~~-----------------------------~--------------------c-------~~~Pg~~~~~~~~~~~ 199 (455)
+.+.-. . + ..+|.+++++...+..
T Consensus 124 ~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~n~~vr~~~~~~~~~ 203 (422)
T d1h3ga3 124 VVLSHIGKHHWWMKDLPTPDWINYGGKFVPTQHHRVAVQDPYAAQADSENFTKGWFVEGMPDLNQTNPLVANYLIQNNIW 203 (422)
T ss_dssp ECCSBCCTTSGGGGSCSSTTSBSCCSSCCBCCCCGGGGSCTTCCHHHHHHHHHSBSSTTSCBBCTTSHHHHHHHHHHHHH
T ss_pred CccccccccchhhccccccccccccccccccccccccccccccccCcccceeecccccCccccccccHHHHHHHhhhHHH
Confidence 543100 0 0 1346667777666666
Q ss_pred HH-hcCCcEEEeecCCCCCCCccchhHHHHHHHHhcCCCeeEe
Q 012852 200 FA-SWGVDYLKYDNCFNLGIEPKKRYPPMRDALNETGCSIFYS 241 (455)
Q Consensus 200 ~~-~wGidylK~D~~~~~~~~~~~~y~~m~~AL~~~G~~i~~~ 241 (455)
+. +.|||.+.+|..... +.+....+.+++.+..+++++.
T Consensus 204 w~~~~gvDGfR~Da~~~~---~~~f~~~~~~~~~~~~~~~~~i 243 (422)
T d1h3ga3 204 WIEYAGLSGLRIDTYGYS---DGAFLTEYTRRLMAEYPRLNMV 243 (422)
T ss_dssp HHHHHTCSEEEETTGGGS---CHHHHHHHHHHHHHHCTTCEEE
T ss_pred Hhhheeeeeeeecccccc---cchhhhhhhhhhhhccccceEE
Confidence 54 589999999976433 2344556677777776665544
|
| >d1h3ga2 b.71.1.1 (A:518-600) Cyclomaltodextrinase {Flavobacterium sp. 92 [TaxId: 197856]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Glycosyl hydrolase domain superfamily: Glycosyl hydrolase domain family: alpha-Amylases, C-terminal beta-sheet domain domain: Cyclomaltodextrinase species: Flavobacterium sp. 92 [TaxId: 197856]
Probab=82.09 E-value=3.4 Score=30.69 Aligned_cols=68 Identities=13% Similarity=0.046 Sum_probs=48.8
Q ss_pred eeEEEEEcCCCcEEEEEEecCCCceeEEEEceec--CCCCCCceEEEEccCCccccccccceEEEEEcCCCEEEEEEEe
Q 012852 371 LQVWVGPLSGHRLVVALWNRCPKAETITAQWDAL--GLESSTKVSVRDLWQHKQVTGDAVSSFGAQVDAHDCQMYIFTP 447 (455)
Q Consensus 371 ~~vw~~~l~dg~~avalfN~~~~~~~iti~l~~L--GL~~~~~~~vrDlW~g~~~~g~~~~~l~~~L~pH~~~ll~ltp 447 (455)
.-++.|...+ +.+++++|.+++++++ ++++. .+.. .-+.+|+-+|+.. ..+. +++|+|-++.++.|-.
T Consensus 11 vYvyfR~~~~-~~VmVi~N~n~~~~~l--dl~Rf~E~l~~--~~~~~dVlsgk~i--~l~~--~l~l~~ks~lIlEl~~ 80 (83)
T d1h3ga2 11 TWVYFRYNKD-KRIMVAMNNNDKPMTL--PTARFQEMLKG--APSGVDFLSGKTV--GLGR--ELRLAPKSVVVIELPG 80 (83)
T ss_dssp EEEEEEECSS-EEEEEEEECSSSCEEE--EGGGGHHHHTT--CCEEEETTTCCEE--ECSS--EEEECTTCEEEEEEEC
T ss_pred EEEEEEEeCC-CEEEEEECCCCccEEE--CHHHHHHHhcC--CCeEEECCCCCEE--ECCC--ceEECCCceEEEEecC
Confidence 5667777654 5788999999987655 44443 1222 2478999999986 3444 6889999999998864
|
| >d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Oligo-1,6, glucosidase species: Bacillus cereus [TaxId: 1396]
Probab=81.64 E-value=1.4 Score=42.16 Aligned_cols=102 Identities=18% Similarity=0.077 Sum_probs=66.5
Q ss_pred CHHHHHHHHHHHHHcCCcccCceEEEecCCcCCCCCCCCCCc-----ccCCCCCC--CCHHHHHHHHHhcCCeEEEEecC
Q 012852 106 SETIIKETADALVSTGLAELGYDHVNIDDCWSSPLRDLKGQL-----VPDTITFP--SGIKALADYVHGKGLKLGIYSDA 178 (455)
Q Consensus 106 ~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~~~~rd~~G~~-----~~d~~~FP--~Gl~~l~~~v~~~G~k~Glw~~p 178 (455)
|-+.|.+.++.+ +++|++.|.|=-=+.. ..+..|.+ .+|+ +|- +.++.||+.+|++||++-|=+-+
T Consensus 29 d~~gi~~kLdYL-----k~LGv~~I~l~Pi~~~-~~~~~GY~~~d~~~vd~-~~Gt~~df~~Lv~~aH~~Gi~VilD~V~ 101 (479)
T d1uoka2 29 DLRGIISKLDYL-----KELGIDVIWLSPVYES-PNDDNGYDISDYCKIMN-EFGTMEDWDELLHEMHERNMKLMMDLVV 101 (479)
T ss_dssp CHHHHHTTHHHH-----HHHTCCEEEECCCEEC-CCTTTTSSCSEEEEECG-GGCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHhhHHH-----HHcCCCEEEECCCcCC-CCCCCCcCccccCCcCc-ccCCHHHHHHHHHHHHHCCCEEEecccc
Confidence 567778888888 7799999877322211 11112322 3443 332 25999999999999998764422
Q ss_pred C-----------------------------cc-------------------------------cc-----CCCCcccccH
Q 012852 179 G-----------------------------VF-------------------------------TC-----QVRPGSLFHE 193 (455)
Q Consensus 179 g-----------------------------~~-------------------------------~c-----~~~Pg~~~~~ 193 (455)
- .. .+ ..+|.+++++
T Consensus 102 NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~i 181 (479)
T d1uoka2 102 NHTSDEHNWFIESRKSKDNKYRDYYIWRPGKEGKEPNNWGAAFSGSAWQYDEMTDEYYLHLFSKKQPDLNWDNEKVRQDV 181 (479)
T ss_dssp SBCCTTSHHHHHHTTCTTCTTGGGBCEECCSSSSCSSCBBCTTSSBSEEEETTTTEEEECSSCTTSCBBCTTSHHHHHHH
T ss_pred cccccccchhhhhhhccCCccccceeccccccCcCcCCccccCCCCccccccccCcceecccCCCccccccCCHHHHHHH
Confidence 0 00 00 1356677888
Q ss_pred HhHHHHHHhcCCcEEEeecCC
Q 012852 194 KDDAPLFASWGVDYLKYDNCF 214 (455)
Q Consensus 194 ~~~~~~~~~wGidylK~D~~~ 214 (455)
...++.+.+.|||.+.+|...
T Consensus 182 ~~~~~~W~e~gvDGfR~D~~~ 202 (479)
T d1uoka2 182 YEMMKFWLEKGIDGFRMDVIN 202 (479)
T ss_dssp HHHHHHHHHTTCCEEEETTGG
T ss_pred HHHHHHHHHcCCCCcccccce
Confidence 888888899999999999753
|
| >d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus subtilis [TaxId: 1423]
Probab=81.00 E-value=0.85 Score=42.52 Aligned_cols=103 Identities=11% Similarity=0.016 Sum_probs=65.7
Q ss_pred CHHHHHHHHHHHHHcCCcccCceEEEecCCcC------CCCCCCCCCc--------ccCCCCCC--CCHHHHHHHHHhcC
Q 012852 106 SETIIKETADALVSTGLAELGYDHVNIDDCWS------SPLRDLKGQL--------VPDTITFP--SGIKALADYVHGKG 169 (455)
Q Consensus 106 ~e~~i~~~ad~~~~~gl~~~G~~~~~iDDGW~------~~~rd~~G~~--------~~d~~~FP--~Gl~~l~~~v~~~G 169 (455)
+-+.|.+.++.+ +++|++.|.|===.. .......|.| .+|+ +|- +.|+.|++.+|++|
T Consensus 15 ~f~~i~~~ldyl-----~~lGv~aIwl~Pi~~~~~~~~~~~~~~~~y~gY~~~dy~~vd~-~~Gt~~df~~LV~~aH~~G 88 (344)
T d1ua7a2 15 SFNTLKHNMKDI-----HDAGYTAIQTSPINQVKEGNQGDKSMSNWYWLYQPTSYQIGNR-YLGTEQEFKEMCAAAEEYG 88 (344)
T ss_dssp CHHHHHHTHHHH-----HHTTCSEEEECCCEEECCTGGGCCBGGGGGGGGCEEEEEEEET-TTEEHHHHHHHHHHHHTTT
T ss_pred cHHHHHHhHHHH-----HHcCCCEEEeCCCeeCCCcCCCCCCCCCCccccccccCCCCCC-CCCCHHHHHHHHHHhcccc
Confidence 466788888988 778988887622111 1000001111 2343 342 24999999999999
Q ss_pred CeEEEEecCC-----c---------------cc--------------c---------CCCCcccccHHhHHHHHHhcCCc
Q 012852 170 LKLGIYSDAG-----V---------------FT--------------C---------QVRPGSLFHEKDDAPLFASWGVD 206 (455)
Q Consensus 170 ~k~Glw~~pg-----~---------------~~--------------c---------~~~Pg~~~~~~~~~~~~~~wGid 206 (455)
||+=+=+-+. . .. | ..+|.+++|+...++.+.+.|||
T Consensus 89 i~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dln~~np~Vr~~l~~~~~~w~~~giD 168 (344)
T d1ua7a2 89 IKVIVDAVINHTTFDYAAISNEVKSIPNWTHGNTQIKNWSDRWDVTQNSLLGLYDWNTQNTQVQSYLKRFLERALNDGAD 168 (344)
T ss_dssp CEEEEEECCSBCCSCTTTSCHHHHTSTTCEEECCBCCCTTCHHHHHHSBBTTBCEECTTSHHHHHHHHHHHHHHHHTTCC
T ss_pred eeEeeccceeeecCCCchhhccccCCcccccCCCCCCCCCCCcCcccCccccCCccccCChHHHHHHHHHHHHHHhcCCC
Confidence 9987644321 0 00 0 23567788888888888889999
Q ss_pred EEEeecCC
Q 012852 207 YLKYDNCF 214 (455)
Q Consensus 207 ylK~D~~~ 214 (455)
.+.+|...
T Consensus 169 GfR~Daak 176 (344)
T d1ua7a2 169 GFRFDAAK 176 (344)
T ss_dssp EEEETTGG
T ss_pred eEEEeeee
Confidence 99999753
|