Citrus Sinensis ID: 012855

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-----
MACNSATGCQSGCYKNEFERDLKPATETISDSNEQNLCVKCKANEPTPGAGEDGKHCLDCFRSNLFGKFRLAVASNALITPADNVLVAFSGGPSSRVALQFVHELQQRAQKNFDASKDRSLPVFGVGVVFVDETAYYPVPSSEIDNAIQEIKLIVSNLSPPTKELHVIPIESIFCSNPCDGRERFKKLVDSVSDATGKEDLLLQLRMLSLQKFASENGYNRLLLGLCTSRIACHVITATVKGRGYSLPADIQYADARWEIPVVLPLRDCLAQELNMLCQLDCLKTVELLNQTHSGINGLVSSFVKILQEENPSRESTIMRTAGKLTPFHFNKIPELNDSSVPLASQRRQKRFNLKPNESISSESFCSLCYSPLNQSDLTSLSSHDNCKNSDIFVAACCSSCRFQIFPKDPSSMEKFYSLLPEPLVARAKHVRNGDSSLLREQIQDFLLSDSEDDA
cccccccccccccccccccccccccccccccccccccccccccccccEEccccccccHHHHHHHHHHHHHHHHHHcccccccccEEEEEcccHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEEccccccccccHHHHHHHHHHHHHHHHcccccccEEEEccccccccccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHcccEEEEcccHHHHHHHHHHHHHcccccccccccccccccccccEEEccccccHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccHHHHHHHHcccccccccccc
*************************************CV*CKANEPTPGAGEDGKHCLDCFRSNLFGKFRLAVASNALITPADNVLVAFSGGPSSRVALQFVHELQQRAQKNFDASKDRSLPVFGVGVVFVDETAYYPVPSSEIDNAIQEIKLIVSNLSPPTKELHVIPIESIFCSNPCDGRERFKKLVDSVSDATGKEDLLLQLRMLSLQKFASENGYNRLLLGLCTSRIACHVITATVKGRGYSLPADIQYADARWEIPVVLPLRDCLAQELNMLCQLDCLKTVELLNQTHSGINGLVSSFVKILQEENPSRESTIMRTAGKLTPFHFNKIPELNDSSVPLASQRRQKRFNLKPNESISS**FCSLCYSPL***********DNCKNSDIFVAACCSSCRFQIFPKD*SSMEKFYSLLPEPLVAR*********************SD*****
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MACNSATGCQSGCYKNEFERDLKPATETISDSNEQNLCVKCKANEPTPGAGEDGKHCLDCFRSNLFGKFRLAVASNALITPADNVLVAFSGGPSSRVALQFVHELQQRAQKNFDASKDRSLPVFGVGVVFVDETAYYPVPSSEIDNAIQEIKLIVSNLSPPTKELHVIPIESIFCSNPCDGRERFKKLVDSVSDATGKEDLLLQLRMLSLQKFASENGYNRLLLGLCTSRIACHVITATVKGRGYSLPADIQYADARWEIPVVLPLRDCLAQELNMLCQLDCLKTVELLNQTHSGINGLVSSFVKILQEENPSRESTIMRTAGKLTPFHFNKIPELNDSSVPLASQRRQKRFNLKPNESISSESFCSLCYSPLNQSDLTSLSSHDNCKNSDIFVAACCSSCRFQIFPKDPSSMEKFYSLLPEPLVARAKHVRNGDSSLLREQIQDFLLSDSEDDA

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Cytoplasmic tRNA 2-thiolation protein 2 Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). May act by forming a heterodimer with NCS6 that ligates sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position.probableO65628
Cytoplasmic tRNA 2-thiolation protein 2 Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). May act by forming a heterodimer with NCS6 that ligates sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position.probableQ2QMW0
Cytoplasmic tRNA 2-thiolation protein 2 Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). May act by forming a heterodimer with NCS6 that ligates sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position.probableA2ZM73

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1WY5, chain A
Confidence level:very confident
Coverage over the Query: 60-107,121-172,186-327
View the alignment between query and template
View the model in PyMOL
Template: 2WSI, chain A
Confidence level:confident
Coverage over the Query: 38-176,197-287
View the alignment between query and template
View the model in PyMOL