Citrus Sinensis ID: 012903
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 453 | ||||||
| 225452938 | 452 | PREDICTED: uncharacterized protein LOC10 | 0.997 | 1.0 | 0.863 | 0.0 | |
| 224141045 | 457 | predicted protein [Populus trichocarpa] | 1.0 | 0.991 | 0.850 | 0.0 | |
| 225452940 | 444 | PREDICTED: uncharacterized protein LOC10 | 0.980 | 1.0 | 0.845 | 0.0 | |
| 356551061 | 461 | PREDICTED: uncharacterized protein LOC10 | 0.991 | 0.973 | 0.812 | 0.0 | |
| 356573155 | 449 | PREDICTED: uncharacterized protein LOC10 | 0.991 | 1.0 | 0.816 | 0.0 | |
| 357496659 | 450 | hypothetical protein MTR_6g013750 [Medic | 0.993 | 1.0 | 0.812 | 0.0 | |
| 388515241 | 450 | unknown [Medicago truncatula] | 0.993 | 1.0 | 0.812 | 0.0 | |
| 449447406 | 447 | PREDICTED: uncharacterized protein LOC10 | 0.984 | 0.997 | 0.828 | 0.0 | |
| 255570220 | 465 | conserved hypothetical protein [Ricinus | 0.986 | 0.961 | 0.797 | 0.0 | |
| 356573157 | 441 | PREDICTED: uncharacterized protein LOC10 | 0.973 | 1.0 | 0.799 | 0.0 |
| >gi|225452938|ref|XP_002284191.1| PREDICTED: uncharacterized protein LOC100268024 isoform 1 [Vitis vinifera] gi|296082978|emb|CBI22279.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 778 bits (2010), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/453 (86%), Positives = 413/453 (91%), Gaps = 1/453 (0%)
Query: 1 MAAAIAVSSPNPTILQNLIAIRDSSSGFFGGTLSGFSFQLKSRSRKRDISTLVVASSSAA 60
M AA+AV SP ++LQN I+ R +S F GG+L G QLK R+R RD LVVAS+S++
Sbjct: 1 MVAAVAVFSPKSSLLQNPISFRGPNSSFLGGSLKGLCLQLKPRNRSRDFINLVVASASSS 60
Query: 61 GDITRSSKSDSGRFYLNFTGFPFPLGPFLNRRTIRTEVVKGRIWLFEQEQALGFSSVSTN 120
+ ++ S GRFYLNFTGFPFPLGPFLNRRTIRTE VK IWLFEQEQALGFSSVSTN
Sbjct: 61 -SSSSTNSSGGGRFYLNFTGFPFPLGPFLNRRTIRTEAVKDCIWLFEQEQALGFSSVSTN 119
Query: 121 IRMTVIKLKSGGLWVHAPIAPTKECIQLVKELAAPVEYIILPTFAYEHKIFVGPFSRKFP 180
IRMTVIKLKSGGLWVHAPIAPTKECIQLVKEL APVEYIILPTFAYEHKIFVGPFSRKFP
Sbjct: 120 IRMTVIKLKSGGLWVHAPIAPTKECIQLVKELGAPVEYIILPTFAYEHKIFVGPFSRKFP 179
Query: 181 RAQIWVAPRQWSWPLNLPLAFFGIFRAKTLIDEDLSTPWADEIEQKVLSSPEVGIGPYVE 240
+AQIWVAPRQWSWPLNLPL FFGIFRAKTL DED+STPWA EIEQKVLSSPEVGIGPYVE
Sbjct: 180 QAQIWVAPRQWSWPLNLPLEFFGIFRAKTLKDEDMSTPWASEIEQKVLSSPEVGIGPYVE 239
Query: 241 VAFYHKPSRTLLVTDAVIFVPRKPPECISKESLLASAKNGLAVKILSKGKEVPQEPVVDN 300
VAFYHK SRTLLVTDAVIFVPR+PPECISKESLLASAKNGLAVK+LSKGKEVP+E VVDN
Sbjct: 240 VAFYHKRSRTLLVTDAVIFVPRQPPECISKESLLASAKNGLAVKLLSKGKEVPEESVVDN 299
Query: 301 PMNQQKGWERMVLQILFLGPSNLLEPNASFAQMSQKLIVSPIVKTLVFSKVPEKVRDWID 360
MN+QKGWERMVLQILFLGPSNLLEPNASFAQMSQKLIVSPIVKTLVFSKVPEKVRDWID
Sbjct: 300 KMNRQKGWERMVLQILFLGPSNLLEPNASFAQMSQKLIVSPIVKTLVFSKVPEKVRDWID 359
Query: 361 RIVCDWRFRRIIPAHFAAPINASRSDFLAAFAFLDDLLGERYVTRPSLSLLFTSLMGKAA 420
I DWRF+RIIPAHF+APINASRSDFLAAFAFLDDLLGERYVTRPSLSLLFTSLMGKAA
Sbjct: 360 GITQDWRFKRIIPAHFSAPINASRSDFLAAFAFLDDLLGERYVTRPSLSLLFTSLMGKAA 419
Query: 421 SYFPPDDMKTLSSLDEFLVSVGAVKKTVSGQKR 453
SYFPPDDMKTLSSLDEFLVSVG VKKTVSG+KR
Sbjct: 420 SYFPPDDMKTLSSLDEFLVSVGVVKKTVSGRKR 452
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224141045|ref|XP_002323885.1| predicted protein [Populus trichocarpa] gi|222866887|gb|EEF04018.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|225452940|ref|XP_002284198.1| PREDICTED: uncharacterized protein LOC100268024 isoform 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356551061|ref|XP_003543897.1| PREDICTED: uncharacterized protein LOC100811507 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356573155|ref|XP_003554729.1| PREDICTED: uncharacterized protein LOC100818397 isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|357496659|ref|XP_003618618.1| hypothetical protein MTR_6g013750 [Medicago truncatula] gi|355493633|gb|AES74836.1| hypothetical protein MTR_6g013750 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|388515241|gb|AFK45682.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|449447406|ref|XP_004141459.1| PREDICTED: uncharacterized protein LOC101203804 [Cucumis sativus] gi|449521942|ref|XP_004167988.1| PREDICTED: uncharacterized LOC101203804 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|255570220|ref|XP_002526070.1| conserved hypothetical protein [Ricinus communis] gi|223534567|gb|EEF36264.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|356573157|ref|XP_003554730.1| PREDICTED: uncharacterized protein LOC100818397 isoform 2 [Glycine max] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 453 | ||||||
| TAIR|locus:2102162 | 455 | AT3G01060 "AT3G01060" [Arabido | 0.909 | 0.905 | 0.799 | 4.3e-173 | |
| ASPGD|ASPL0000078194 | 269 | AN4711 [Emericella nidulans (t | 0.344 | 0.579 | 0.288 | 3.4e-05 |
| TAIR|locus:2102162 AT3G01060 "AT3G01060" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1682 (597.2 bits), Expect = 4.3e-173, P = 4.3e-173
Identities = 330/413 (79%), Positives = 355/413 (85%)
Query: 42 SRSRKRDISTLVVASSSAAGDITRSSKSD-SGRFYLNFTXXXXXXXXXXNRRTIRTEVVK 100
S +R+ + +V ASS++ +T D S RFY+NFT NRRTIRTE VK
Sbjct: 42 SVNREFNSPVMVSASSTSKTVLTDDVDGDQSKRFYINFTGFPFPLGPFLNRRTIRTEAVK 101
Query: 101 GRIWLFEQEQALGFSSVSTNIRMTVIKLKSGGLWVHAPIAPTKECIQLVKELAAPVEYII 160
G IW+FEQEQALGFSSVSTNIRMTVIKLKSGGLWVHAPIAPTKEC+QL+KEL APVEYI+
Sbjct: 102 GCIWMFEQEQALGFSSVSTNIRMTVIKLKSGGLWVHAPIAPTKECVQLIKELGAPVEYIV 161
Query: 161 LPTFAYEHKIFVGPFSRKFPRAQIWVAPRQWSWPLNLPLAFFGIFRAKTLIDEDLSTPWA 220
LPTFAYEHKIFVGPFSRKFP+AQ+WVAPRQWSWPLNLPL FFGIFRAK + D DLSTPWA
Sbjct: 162 LPTFAYEHKIFVGPFSRKFPKAQVWVAPRQWSWPLNLPLEFFGIFRAKIIKDRDLSTPWA 221
Query: 221 DEIEQKVLSSPEVGIGPYVEVAFYHKPSRTLLVTDAVIFVPRKPPECISKESLLASAKNG 280
+EIEQKVLSSPEVGIGPYVEVAFYHK SRTLLVTDAVIFVPRKPP IS ESLLASAKNG
Sbjct: 222 EEIEQKVLSSPEVGIGPYVEVAFYHKRSRTLLVTDAVIFVPRKPPSSISNESLLASAKNG 281
Query: 281 LAVKILSKGKEVPQEPVVDNPMNQQKGWERMVLQILFLGPSNLLEPNASFAQMSQKLIVS 340
LAVKILSKGK++P +PVVDNP +QKGWERMVLQILFLGPSNLLEPNASFA+MSQKLIVS
Sbjct: 282 LAVKILSKGKDIPNDPVVDNPNTRQKGWERMVLQILFLGPSNLLEPNASFARMSQKLIVS 341
Query: 341 PIVKTLVFSKVPEKVRDWIDRIVCDWRFRRIIPAHFAAPINASRSXXXXXXXXXXXXXGE 400
PIVKTLVFSKVPEKVRDWID I DWRF+RIIPAHF APINA RS GE
Sbjct: 342 PIVKTLVFSKVPEKVRDWIDEIARDWRFKRIIPAHFEAPINAGRSDFLAAFGFLEDLLGE 401
Query: 401 RYVTRPSLSLLFTSLMGKAASYFPPDDMKTLSSLDEFLVSVGAVKKTVSGQKR 453
RYVTRPSLSLLFTSLMGKAASYFPPDDM+TLSSLD+FLVSVGAVKKTVSG+KR
Sbjct: 402 RYVTRPSLSLLFTSLMGKAASYFPPDDMRTLSSLDQFLVSVGAVKKTVSGRKR 454
|
|
| ASPGD|ASPL0000078194 AN4711 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00021037001 | SubName- Full=Chromosome chr14 scaffold_21, whole genome shotgun sequence; (452 aa) | ||||||||||
(Vitis vinifera) | |||||||||||
| GSVIVG00028499001 | • | • | • | 0.688 | |||||||
| GSVIVG00022571001 | • | • | 0.610 | ||||||||
| GSVIVG00001938001 | • | • | 0.592 | ||||||||
| GSVIVG00019398001 | • | • | 0.570 | ||||||||
| GSVIVG00006111001 | • | • | • | 0.551 | |||||||
| GSVIVG00007992001 | • | 0.502 | |||||||||
| GSVIVG00011351001 | • | 0.500 | |||||||||
| GSVIVG00011540001 | • | 0.495 | |||||||||
| GSVIVG00024786001 | • | 0.494 | |||||||||
| GSVIVG00024783001 | • | 0.490 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 453 | |||
| pfam14234 | 314 | pfam14234, DUF4336, Domain of unknown function (DU | 1e-148 |
| >gnl|CDD|206402 pfam14234, DUF4336, Domain of unknown function (DUF4336) | Back alignment and domain information |
|---|
Score = 423 bits (1090), Expect = e-148
Identities = 155/327 (47%), Positives = 206/327 (62%), Gaps = 46/327 (14%)
Query: 100 KGRIWLFEQEQALGFSSVSTNIRMTVIKLKSGGLWVHAPIAPTKECIQLVKELAA---PV 156
G+IW FEQ Q + + V+ IRMTV+KLK GGLWV+AP+APT EC++L++EL A PV
Sbjct: 1 PGQIWTFEQLQGILY--VAVPIRMTVVKLKDGGLWVYAPVAPTPECVRLLEELEAEHGPV 58
Query: 157 EYIILPTF-AYEHKIFVGPFSRKFPRAQIWVAPRQWSWPLNLPLAFFGIFRAKTLIDEDL 215
+YI+LPT EHK+FVGPF+R FP+AQ+WVAP QWS+PLNLPL++ GI R +TL +
Sbjct: 59 KYIVLPTASGLEHKVFVGPFARAFPKAQVWVAPGQWSFPLNLPLSWLGIPRTRTLPLDSD 118
Query: 216 STPWADEIEQKVLSSPEVGIGPYVEVAFYHKPSRTLLVTDAVIFVPRKPPECISKESLLA 275
TPWADE + VL ++G+GP+ EVAF+HKPS+TLLVTDA++ +P +PPE + L
Sbjct: 119 GTPWADEFDYAVLGPLDLGLGPFQEVAFFHKPSKTLLVTDALVSIPEEPPEIFDLDPLP- 177
Query: 276 SAKNGLAVKILSKGKEVPQEPVVDNPMNQQKGWERMVLQILFLGPSNLLEPN-------- 327
+L ++ EPV D P ++KGW+R+VL L+ PS L P
Sbjct: 178 ---------LLFHARDRADEPVEDTPEARRKGWQRIVLFALYFRPSALEVPPAPEVLREA 228
Query: 328 ---------------------ASFAQMSQKLIVSPIVKTLVFSKVPEKVRDWIDRIVCDW 366
ASF + +L V+PI++TLVF + PE+V W DR V W
Sbjct: 229 FKPGLRSKFGLFPFRWQPGWQASFQALRGRLQVAPILQTLVFPRAPEEVLAWADR-VASW 287
Query: 367 RFRRIIPAHFAAPINASRSDFLAAFAF 393
F RIIPAHF API A+ +F AAFAF
Sbjct: 288 DFERIIPAHFDAPIAATPEEFRAAFAF 314
|
Length = 314 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 453 | |||
| PF14234 | 285 | DUF4336: Domain of unknown function (DUF4336) | 100.0 | |
| PF14597 | 199 | Lactamase_B_5: Metallo-beta-lactamase superfamily; | 99.54 | |
| TIGR03413 | 248 | GSH_gloB hydroxyacylglutathione hydrolase. Members | 98.49 | |
| PLN02469 | 258 | hydroxyacylglutathione hydrolase | 98.36 | |
| PLN02398 | 329 | hydroxyacylglutathione hydrolase | 98.26 | |
| PRK10241 | 251 | hydroxyacylglutathione hydrolase; Provisional | 98.14 | |
| PLN02962 | 251 | hydroxyacylglutathione hydrolase | 97.77 | |
| PRK05452 | 479 | anaerobic nitric oxide reductase flavorubredoxin; | 97.68 | |
| PRK11921 | 394 | metallo-beta-lactamase/flavodoxin domain-containin | 97.63 | |
| COG0426 | 388 | FpaA Uncharacterized flavoproteins [Energy product | 97.63 | |
| COG0491 | 252 | GloB Zn-dependent hydrolases, including glyoxylase | 97.32 | |
| smart00849 | 183 | Lactamase_B Metallo-beta-lactamase superfamily. Ap | 96.35 | |
| PF00753 | 194 | Lactamase_B: Metallo-beta-lactamase superfamily; I | 96.01 | |
| KOG0813 | 265 | consensus Glyoxylase [General function prediction | 94.26 | |
| PRK11539 | 755 | ComEC family competence protein; Provisional | 82.25 |
| >PF14234 DUF4336: Domain of unknown function (DUF4336) | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-83 Score=629.89 Aligned_cols=281 Identities=50% Similarity=0.970 Sum_probs=270.1
Q ss_pred cCcEEEEeeeccccccceecCceEEEEEecCCcEEEEcCCCCCHHHHHHHHHh----cCCeeEEEecCCCcccccChHHH
Q 012903 100 KGRIWLFEQEQALGFSSVSTNIRMTVIKLKSGGLWVHAPIAPTKECIQLVKEL----AAPVEYIILPTFAYEHKIFVGPF 175 (453)
Q Consensus 100 ~~~IWt~e~~~~~~~~~v~v~~RMTVIRL~dG~L~V~SPvalT~El~~~L~~L----G~~Vk~IV~Pn~~leH~lfl~~~ 175 (453)
+|+||++||+|++ +++.+|+|||||||++|+|||||||++|+||+++|++| | +|+|||+||.++|||+|+++|
T Consensus 1 p~~IW~~eq~~~~--~~v~v~~RMTVVrL~~G~L~VhSPvapT~el~~~l~~L~~~~G-~VkyIVaPn~~lEH~lfl~~w 77 (285)
T PF14234_consen 1 PDQIWTFEQPQGI--FYVPVPTRMTVVRLSDGGLWVHSPVAPTPELKAELDELEAQHG-PVKYIVAPNKGLEHHLFLGPW 77 (285)
T ss_pred CCcEEEEeccccc--cceeecceEEEEEECCCCEEEECCCCCCHHHHHHHHHHhccCC-ceeEEEcCCcchhHHHhHHHH
Confidence 5789999999975 45999999999999999999999999999999999999 6 999999999878999999999
Q ss_pred HHhCCCCeEEeCCCCccCCCCCCcccccccccCccCCCCCCCCccCCeEEEEccCCCCCCCCceEEEEEECCCCeEEEcc
Q 012903 176 SRKFPRAQIWVAPRQWSWPLNLPLAFFGIFRAKTLIDEDLSTPWADEIEQKVLSSPEVGIGPYVEVAFYHKPSRTLLVTD 255 (453)
Q Consensus 176 ~~~fP~AkV~a~pg~~s~p~~lpl~~~gi~~~~~L~~~~~~~pw~de~e~~~l~~~~~G~~~~~EvvffHk~SrTLIvtD 255 (453)
+++||+|+||++||+|++|+++|++|.|++.++.|.+++...+|++|||+.+|++.++|++.++|++||||+|||||+||
T Consensus 78 ~~afP~A~v~~~Pg~~s~p~~lp~~~~g~~~~~~l~~~~~~~pw~~eid~~~l~~~~lg~~~~~EvvFfHk~SkTLIvTD 157 (285)
T PF14234_consen 78 ARAFPDAKVWAPPGQWSFPLNLPLSWLGIPRDKTLPDDSDPPPWADEIDQEILGPLDLGSGPFQEVVFFHKPSKTLIVTD 157 (285)
T ss_pred HHHCCCCEEEeCCCcccccccCchhhcCCccccccccccCCCCchhheeeEEecccccCCCceeEEEEEECCCCeEEhhh
Confidence 99999999999999999999999999999998888876778999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCccchhhhhHhhhcchhhhhhccCCCCCCCCccCCccccchhHHHHHHHHHhhCCCCCCCCchhHHhhhc
Q 012903 256 AVIFVPRKPPECISKESLLASAKNGLAVKILSKGKEVPQEPVVDNPMNQQKGWERMVLQILFLGPSNLLEPNASFAQMSQ 335 (453)
Q Consensus 256 ll~nlp~~ppe~~s~~~Ll~~a~~g~~~~ll~~~~~~~~~~~~dt~~~r~~gW~R~~L~~~yf~P~~l~~p~~sF~~l~~ 335 (453)
+++|+|+++|++++.++ ++||+|+|+.+++++.||+++|++||+||+||++||+|+.++.|+.+|++|.+
T Consensus 158 ll~nip~~~p~~~~~d~----------~pll~~ar~~~~~~~~d~~~~r~~GW~r~~Lf~~y~~P~~l~~~~~sf~~~~~ 227 (285)
T PF14234_consen 158 LLFNIPATPPEIFQLDP----------YPLLFHARDRADEPVEDTPENRRKGWQRMVLFALYFRPSALEVPEASFDALSG 227 (285)
T ss_pred chhhCCCCCCcccCCCc----------cchhhcccCCCCCCCCCCHHHHhhhHHHHhHhheeeccccccCchhhHHHHhC
Confidence 99999999999999886 67889999999999999999999999999999999999999999999999999
Q ss_pred cccccceEeeeeeccChHHHHHHHHHHHccCCCCEEEecCCCccccChHHHHHHHHHH
Q 012903 336 KLIVSPIVKTLVFSKVPEKVRDWIDRIVCDWRFRRIIPAHFAAPINASRSDFLAAFAF 393 (453)
Q Consensus 336 ~l~V~Pil~~Lvf~~~~~~~r~wv~~I~~~WdferIIpaHGd~~i~~g~~~fr~aF~~ 393 (453)
|++|+||+++|+|+++++++++|+++|+..|||+||||||+++|+++++++||+||+|
T Consensus 228 ~l~vaPil~~Lv~~r~~~~~~~w~~~v~~~w~f~~iip~H~~api~~~~~~~~~af~f 285 (285)
T PF14234_consen 228 RLFVAPILQTLVFPRAPEEVLAWVDRVASDWDFRRIIPAHFDAPIAATPEEFRAAFSF 285 (285)
T ss_pred CceeCcchhheeccCCcHHHHHHHHHHhhhcCCcEEEecccCCcccCCHHHHHHHhCC
Confidence 9999999999999999999999999999449999999999999999999999999986
|
|
| >PF14597 Lactamase_B_5: Metallo-beta-lactamase superfamily; PDB: 2P97_B | Back alignment and domain information |
|---|
| >TIGR03413 GSH_gloB hydroxyacylglutathione hydrolase | Back alignment and domain information |
|---|
| >PLN02469 hydroxyacylglutathione hydrolase | Back alignment and domain information |
|---|
| >PLN02398 hydroxyacylglutathione hydrolase | Back alignment and domain information |
|---|
| >PRK10241 hydroxyacylglutathione hydrolase; Provisional | Back alignment and domain information |
|---|
| >PLN02962 hydroxyacylglutathione hydrolase | Back alignment and domain information |
|---|
| >PRK05452 anaerobic nitric oxide reductase flavorubredoxin; Provisional | Back alignment and domain information |
|---|
| >PRK11921 metallo-beta-lactamase/flavodoxin domain-containing protein; Provisional | Back alignment and domain information |
|---|
| >COG0426 FpaA Uncharacterized flavoproteins [Energy production and conversion] | Back alignment and domain information |
|---|
| >COG0491 GloB Zn-dependent hydrolases, including glyoxylases [General function prediction only] | Back alignment and domain information |
|---|
| >smart00849 Lactamase_B Metallo-beta-lactamase superfamily | Back alignment and domain information |
|---|
| >PF00753 Lactamase_B: Metallo-beta-lactamase superfamily; InterPro: IPR001279 Apart from the beta-lactamases and metallo-beta-lactamases, a number of other proteins contain this domain [] | Back alignment and domain information |
|---|
| >KOG0813 consensus Glyoxylase [General function prediction only] | Back alignment and domain information |
|---|
| >PRK11539 ComEC family competence protein; Provisional | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 453 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-07 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.8 bits (123), Expect = 4e-07
Identities = 67/458 (14%), Positives = 120/458 (26%), Gaps = 128/458 (27%)
Query: 47 RDI--STLVVASSSAAGDITRSSKSDSGRFYL-------------NFTG------FPF-- 83
+D+ + S I S + SG L F + F
Sbjct: 36 KDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLM 95
Query: 84 ------PLGPFLNRRTIRTEVVKGRIWLFEQEQALGFSSVS-----TNIRMTVIKLKSG- 131
P + R + + L+ Q +VS +R +++L+
Sbjct: 96 SPIKTEQRQPSMMTRMYIEQRDR----LYNDNQVFAKYNVSRLQPYLKLRQALLELRPAK 151
Query: 132 GLWVHAPIAPTKECIQLVKELAAPV--EYIILPTFAYEHKIFVGPFSRKFPRAQIWVAPR 189
+ + + K +A V Y + + KIF W+ +
Sbjct: 152 NVLIDGVLGSGKTW------VALDVCLSYKVQCKMDF--KIF-------------WLNLK 190
Query: 190 QWSWP---LNLPLAFFGIFRAKTLIDEDLSTPWADEIEQKVLSSPEVGIGPYVEVAFYHK 246
+ P L + D S+ I I + K
Sbjct: 191 NCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHS---------IQAELRRLLKSK 241
Query: 247 P-SRTLLVTDAVIFVPRKPPECISKESLLASAKNGLAVKIL--SKGKEVPQEPVVDNPMN 303
P LLV V + + + L+ KIL ++ K+V D
Sbjct: 242 PYENCLLVLLNV-----QNAKAW--NAF------NLSCKILLTTRFKQV-----TDFLSA 283
Query: 304 QQKGWERMVLQILFLGPSNLLEPNASFAQMS------QKLIVSPIVKTLVFSKVPEKVRD 357
+ + L P + + + L +P S + E +RD
Sbjct: 284 ATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNP----RRLSIIAESIRD 339
Query: 358 WIDRI-----VCDWRFRRIIPAHFAA--PINASRSDFLAAFAFLDDLLGERYVTRPSLSL 410
+ V + II + P R F F ++ LSL
Sbjct: 340 GLATWDNWKHVNCDKLTTIIESSLNVLEP-AEYRKMFDRLSVFPPSA----HIPTILLSL 394
Query: 411 LFTSLMGKAASYFPPDDMKTL--SSL-----DEFLVSV 441
++ + + L SL E +S+
Sbjct: 395 IWFDV----IKSDVMVVVNKLHKYSLVEKQPKESTISI 428
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 453 | |||
| 2p97_A | 201 | Hypothetical protein; putative metal-dependent hyd | 99.53 | |
| 3hnn_A | 262 | Putative diflavin flavoprotein A 5; PSI-2, protein | 99.07 | |
| 1m2x_A | 223 | Class B carbapenemase BLAB-1; alpha-beta/BETA-alph | 99.03 | |
| 1mqo_A | 227 | Beta-lactamase II; alpha-beta/BETA-alpha fold, hyd | 98.88 | |
| 2vw8_A | 303 | PA1000, PQSE; quinolone signal response protein, s | 98.86 | |
| 4ad9_A | 289 | Lactb2, beta-lactamase-like protein 2; hydrolase, | 98.83 | |
| 4eyb_A | 270 | Beta-lactamase NDM-1; metallo beta lactamase, anti | 98.8 | |
| 1a7t_A | 232 | Metallo-beta-lactamase; hydrolase (beta-lactamase) | 98.79 | |
| 2fhx_A | 246 | SPM-1; metallo-beta-lactamase, dinuclear zinc, ant | 98.72 | |
| 4hl2_A | 243 | Beta-lactamase NDM-1; structural genomics, PSI-bio | 98.7 | |
| 3l6n_A | 219 | Metallo-beta-lactamase; zinc, hydolase, antibiotic | 98.7 | |
| 2y8b_A | 265 | Metallo-B-lactamase; hydrolase, cephalosporins, an | 98.69 | |
| 2zo4_A | 317 | Metallo-beta-lactamase family protein; hydrolase; | 98.67 | |
| 2ohh_A | 404 | Type A flavoprotein FPRA; beta-lactamase like doma | 98.66 | |
| 3q6v_A | 233 | Beta-lactamase; metalloenzyme, alpha-beta, hydrola | 98.66 | |
| 3iog_A | 227 | Beta-lactamase; hydrolase, antibiotic resistance, | 98.64 | |
| 1ycg_A | 398 | Nitric oxide reductase; DIIRON site, oxidoreductas | 98.59 | |
| 1jjt_A | 228 | IMP-1 metallo beta-lactamase; metallo-beta-lactama | 98.59 | |
| 2q9u_A | 414 | A-type flavoprotein; flavodoxin like, beta lactama | 98.38 | |
| 1qh5_A | 260 | Glyoxalase II, protein (hydroxyacylglutathione hyd | 98.33 | |
| 1e5d_A | 402 | Rubredoxin\:oxygen oxidoreductase; oxygenreductase | 98.29 | |
| 2qed_A | 258 | Hydroxyacylglutathione hydrolase; metallo-B- super | 98.27 | |
| 2zwr_A | 207 | Metallo-beta-lactamase superfamily protein; hydrol | 98.21 | |
| 4dik_A | 410 | Flavoprotein; TM0755, electron transport, DI-iron | 98.18 | |
| 2gcu_A | 245 | Putative hydroxyacylglutathione hydrolase 3; ethyl | 98.18 | |
| 4ax1_B | 303 | Metallo-beta-lactamase AIM-1; hydrolase, antibioti | 98.13 | |
| 3m8t_A | 294 | 'BLR6230 protein; subclass B3 beta-lactamase, zinc | 98.06 | |
| 1xm8_A | 254 | Glyoxalase II; structural genomics, protein struct | 98.05 | |
| 2cfu_A | 658 | SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1 | 98.02 | |
| 4efz_A | 298 | Metallo-beta-lactamase family protein; structural | 97.94 | |
| 1k07_A | 263 | FEZ-1 beta-lactamase; monomer with alpha-beta/BETA | 97.9 | |
| 2p18_A | 311 | Glyoxalase II; metalloprotein, beta sandwich, alph | 97.87 | |
| 2xf4_A | 210 | Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A | 97.84 | |
| 3r2u_A | 466 | Metallo-beta-lactamase family protein; structural | 97.58 | |
| 3dha_A | 254 | N-acyl homoserine lactone hydrolase; zinc bimetall | 97.58 | |
| 1sml_A | 269 | Protein (penicillinase); metallo-beta-lactamase, a | 97.53 | |
| 3tp9_A | 474 | Beta-lactamase and rhodanese domain protein; struc | 97.47 | |
| 2yhe_A | 668 | SEC-alkyl sulfatase; hydrolase, inversion, metallo | 96.41 | |
| 3esh_A | 280 | Protein similar to metal-dependent hydrolase; stru | 97.3 | |
| 3adr_A | 261 | Putative uncharacterized protein ST1585; quorum se | 97.14 | |
| 2r2d_A | 276 | AGR_PTI_140P, Zn-dependent hydrolases; lactonase, | 96.92 | |
| 3aj3_A | 274 | MLR6805 protein, 4-pyridoxolactonase; Zn-protein, | 96.81 | |
| 1p9e_A | 331 | Methyl parathion hydrolase; Zn containing; 2.40A { | 96.75 | |
| 1ztc_A | 221 | Hypothetical protein TM0894; structural genomics, | 93.99 | |
| 2p4z_A | 284 | Metal-dependent hydrolases of the beta-lactamase s | 86.15 |
| >2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12 | Back alignment and structure |
|---|
Probab=99.53 E-value=1.3e-12 Score=120.12 Aligned_cols=196 Identities=13% Similarity=0.055 Sum_probs=139.9
Q ss_pred EEee-cCcEEEEeeeccccccceecCceEEEEEecCCcEEEEcCCCCCHHHHHHHHHhcCCeeEEEecCCCcccccChHH
Q 012903 96 TEVV-KGRIWLFEQEQALGFSSVSTNIRMTVIKLKSGGLWVHAPIAPTKECIQLVKELAAPVEYIILPTFAYEHKIFVGP 174 (453)
Q Consensus 96 revv-~~~IWt~e~~~~~~~~~v~v~~RMTVIRL~dG~L~V~SPvalT~El~~~L~~LG~~Vk~IV~Pn~~leH~lfl~~ 174 (453)
+++. ++ ||.+...... ..++.+|.+|+.. ++.+|+.|-+.++++.+.|+++| +|++||+.+. .|...+..
T Consensus 3 ~~i~~~~-v~~~~~~~~~----~~~~~n~~li~~~-~~~iliD~g~~~~~~~~~l~~~g-~i~~ii~TH~--DH~gg~~~ 73 (201)
T 2p97_A 3 KSLHRPD-LYSWSTFNPA----RNIDFNGFAWIRP-EGNILIDPVALSNHDWKHLESLG-GVVWIVLTNS--DHVRSAKE 73 (201)
T ss_dssp EECSSTT-EEEEEEEETT----TTEEEEEEEECCT-TCCEEESCCCCCHHHHHHHHHTT-CCSEEECSSG--GGCTTHHH
T ss_pred ccccCCC-EEeeecccCC----CCcceeEEEEEeC-CeeEEEECCCCcHHHHHHHHhcC-CCCEEEECCc--hhhhhHHH
Confidence 5677 55 9999875431 2457899999985 55667777777889999999999 9999999996 99999999
Q ss_pred HHHhCCCCeEEeCCCCccCCCCCCcccccccccCccCCCCCCCCccCCeEEEEccCCCCCCCCceEEEEEECCCCeEEEc
Q 012903 175 FSRKFPRAQIWVAPRQWSWPLNLPLAFFGIFRAKTLIDEDLSTPWADEIEQKVLSSPEVGIGPYVEVAFYHKPSRTLLVT 254 (453)
Q Consensus 175 ~~~~fP~AkV~a~pg~~s~p~~lpl~~~gi~~~~~L~~~~~~~pw~de~e~~~l~~~~~G~~~~~EvvffHk~SrTLIvt 254 (453)
|+++|+ |+||+.+.....-.+.+ +..+.+ ...+..+++....+ ++|...++++|++. ++|+.+
T Consensus 74 ~~~~~~-a~v~~~~~~~~~~~~~~--------~~~~~~---g~~~~~~~~~~~~p----~gHt~g~~~~~~~~-~~lf~G 136 (201)
T 2p97_A 74 IADQTY-TKIAGPVAEKENFPIYC--------DRWLSD---GDELVPGLKVMELQ----GSKTPGELALLLEE-TTLITG 136 (201)
T ss_dssp HHHHSC-CEEEEEGGGTTSCSSCC--------SEEECT---TCBSSTTEEEEEEC----SSSSTTEEEEEETT-TEEEEC
T ss_pred HHHhcC-CEEEEcHhHhhhhcccC--------ceecCC---CCEEcceEEEEECC----CCCCCCcEEEEEcC-CEEEEC
Confidence 999996 99999987654311100 112221 11233356655444 46888999999997 999999
Q ss_pred cccccCCCCCCCccchhhhhHhhhcchhhhhhccCCCCCCCCccCCccccchhHHHHHHHHHhhCCCCCCCCchhHHhhh
Q 012903 255 DAVIFVPRKPPECISKESLLASAKNGLAVKILSKGKEVPQEPVVDNPMNQQKGWERMVLQILFLGPSNLLEPNASFAQMS 334 (453)
Q Consensus 255 Dll~nlp~~ppe~~s~~~Ll~~a~~g~~~~ll~~~~~~~~~~~~dt~~~r~~gW~R~~L~~~yf~P~~l~~p~~sF~~l~ 334 (453)
|++++-+.. ... +.+
T Consensus 137 D~~~~~~~g---~~~------------------------------------------------~~~-------------- 151 (201)
T 2p97_A 137 DLVRAYRAG---GLE------------------------------------------------ILP-------------- 151 (201)
T ss_dssp SSEEBSSTT---SCE------------------------------------------------ECC--------------
T ss_pred ccccccCCC---ccc------------------------------------------------cCC--------------
Confidence 999763100 000 000
Q ss_pred ccccccceEeeeeeccChHHHHHHHHHHHcc-CCCCEEEecCCCccccChHHHHHHHHHHH
Q 012903 335 QKLIVSPIVKTLVFSKVPEKVRDWIDRIVCD-WRFRRIIPAHFAAPINASRSDFLAAFAFL 394 (453)
Q Consensus 335 ~~l~V~Pil~~Lvf~~~~~~~r~wv~~I~~~-WdferIIpaHGd~~i~~g~~~fr~aF~~L 394 (453)
| .+..+.++.+++++++. + +++++|+|+||+.+..++.+.+++.++-|
T Consensus 152 ------~-----~~~~~~~~~~~sl~~l~-~l~~~~~v~pgHg~~~~~~~~~~l~~~~~~~ 200 (201)
T 2p97_A 152 ------D-----EKLMNKQKVVASVRRLA-ALEKVEAVLVGDGWSVFRDGRDRLKELVATL 200 (201)
T ss_dssp ------G-----GGCSCHHHHHHHHHHHH-TCTTCCEEEESBBCCBCSCHHHHHHHHHHHH
T ss_pred ------c-----cccCCHHHHHHHHHHHH-hcCCCCEEEeCCCcceecCHHHHHHHHHHhh
Confidence 0 01235678889999999 8 89999999999887788888888877643
|
| >1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1 | Back alignment and structure |
|---|
| >1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ... | Back alignment and structure |
|---|
| >2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A* | Back alignment and structure |
|---|
| >4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
| >4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A | Back alignment and structure |
|---|
| >1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A* | Back alignment and structure |
|---|
| >2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
| >4hl2_A Beta-lactamase NDM-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ZZ7; 1.05A {Klebsiella pneumoniae} PDB: 4hl1_A* 4h0d_A* 4gyu_A* 4gyq_A 3q6x_A* 3spu_A 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A | Back alignment and structure |
|---|
| >3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0 | Back alignment and structure |
|---|
| >2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A | Back alignment and structure |
|---|
| >2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
| >2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A* | Back alignment and structure |
|---|
| >3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A | Back alignment and structure |
|---|
| >3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A 3t9m_A 3sw3_A | Back alignment and structure |
|---|
| >1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A* | Back alignment and structure |
|---|
| >1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A | Back alignment and structure |
|---|
| >2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis} | Back alignment and structure |
|---|
| >1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A* | Back alignment and structure |
|---|
| >1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3 | Back alignment and structure |
|---|
| >2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2 | Back alignment and structure |
|---|
| >2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A | Back alignment and structure |
|---|
| >4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A* | Back alignment and structure |
|---|
| >2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana} | Back alignment and structure |
|---|
| >4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B | Back alignment and structure |
|---|
| >3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A | Back alignment and structure |
|---|
| >1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A | Back alignment and structure |
|---|
| >2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A* | Back alignment and structure |
|---|
| >4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
| >1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A | Back alignment and structure |
|---|
| >2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A* | Back alignment and structure |
|---|
| >2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica} | Back alignment and structure |
|---|
| >3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus} | Back alignment and structure |
|---|
| >3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A | Back alignment and structure |
|---|
| >1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A | Back alignment and structure |
|---|
| >3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
| >2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP} | Back alignment and structure |
|---|
| >3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
| >3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
| >2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
| >3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A | Back alignment and structure |
|---|
| >1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5 | Back alignment and structure |
|---|
| >1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11 | Back alignment and structure |
|---|
| >2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 453 | |||
| d2p97a1 | 200 | Hypothetical protein Ava3068 {Anabaena variabilis | 99.69 | |
| d1mqoa_ | 221 | Zn metallo-beta-lactamase {Bacillus cereus [TaxId: | 98.86 | |
| d2q0ia1 | 298 | Quinolone signal response protein PqsE {Pseudomona | 98.85 | |
| d1x8ha_ | 228 | Zn metallo-beta-lactamase {Aeromonas hydrophila, C | 98.73 | |
| d1ycga2 | 249 | Nitric oxide reductase N-terminal domain {Moorella | 98.67 | |
| d1jjta_ | 220 | Zn metallo-beta-lactamase {Pseudomonas aeruginosa, | 98.61 | |
| d1znba_ | 230 | Zn metallo-beta-lactamase {Bacteroides fragilis [T | 98.53 | |
| d1m2xa_ | 219 | Zn metallo-beta-lactamase {Chryseobacterium mening | 98.4 | |
| d1ko3a_ | 230 | Zn metallo-beta-lactamase {Pseudomonas aeruginosa, | 98.36 | |
| d1e5da2 | 249 | Rubredoxin oxygen:oxidoreductase (ROO), N-terminal | 98.31 | |
| d2cfua2 | 505 | Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxI | 98.25 | |
| d1vmea2 | 250 | ROO-like flavoprotein TM0755, N-terminal domain {T | 98.07 | |
| d2aioa1 | 266 | Zn metallo-beta-lactamase {Xanthomonas maltophilia | 98.05 | |
| d2gmna1 | 264 | Zn metallo-beta-lactamase {Bradyrhizobium japonicu | 97.96 | |
| d1k07a_ | 262 | Zn metallo-beta-lactamase {Fluoribacter gormanii, | 97.87 | |
| d2qeda1 | 251 | Glyoxalase II (hydroxyacylglutathione hydrolase) { | 97.53 | |
| d1xm8a_ | 254 | Glyoxalase II (hydroxyacylglutathione hydrolase) { | 97.53 | |
| d1qh5a_ | 260 | Glyoxalase II (hydroxyacylglutathione hydrolase) { | 95.98 | |
| d1ztca1 | 207 | Hypothetical protein TM0894 {Thermotoga maritima [ | 95.58 | |
| d1p9ea_ | 294 | Methyl parathion hydrolase {Pseudomonas sp. WBC-3 | 93.64 |
| >d2p97a1 d.157.1.12 (A:1-200) Hypothetical protein Ava3068 {Anabaena variabilis [TaxId: 1172]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-hydrolase/oxidoreductase superfamily: Metallo-hydrolase/oxidoreductase family: Ava3068-like domain: Hypothetical protein Ava3068 species: Anabaena variabilis [TaxId: 1172]
Probab=99.69 E-value=9.8e-16 Score=139.94 Aligned_cols=198 Identities=12% Similarity=0.044 Sum_probs=140.3
Q ss_pred EEEeecCcEEEEeeeccccccceecCceEEEEEecCCcEEEEcCCCCCHHHHHHHHHhcCCeeEEEecCCCcccccChHH
Q 012903 95 RTEVVKGRIWLFEQEQALGFSSVSTNIRMTVIKLKSGGLWVHAPIAPTKECIQLVKELAAPVEYIILPTFAYEHKIFVGP 174 (453)
Q Consensus 95 ~revv~~~IWt~e~~~~~~~~~v~v~~RMTVIRL~dG~L~V~SPvalT~El~~~L~~LG~~Vk~IV~Pn~~leH~lfl~~ 174 (453)
|+.+...++|...-... ...+...+++|+..+|.+ |++|.+++++.+++|+++| +|+|||++|. .|...++.
T Consensus 1 ~~~~~~p~l~~~~~~~~----~~~~~~n~~~v~~~~g~v-lIDp~~~~~~~~~~l~~~g-~i~~vi~TH~--DH~g~~~~ 72 (200)
T d2p97a1 1 MKSLHRPDLYSWSTFNP----ARNIDFNGFAWIRPEGNI-LIDPVALSNHDWKHLESLG-GVVWIVLTNS--DHVRSAKE 72 (200)
T ss_dssp CEECSSTTEEEEEEEET----TTTEEEEEEEECCTTCCE-EESCCCCCHHHHHHHHHTT-CCSEEECSSG--GGCTTHHH
T ss_pred CCCCcCCCeEEEEeecC----CCccccEEEEEEECCeeE-EEECCcChHHHHHHHHhcC-CccEEEecCc--cccchHHH
Confidence 35666445886553211 234456899999877765 6699999999999999999 9999999984 89999999
Q ss_pred HHHhCCCCeEEeCCCCccCCCCCCcccccccccCccCCCCCCCCccCCeEEEEccCCCCCCCCceEEEEEECCCCeEEEc
Q 012903 175 FSRKFPRAQIWVAPRQWSWPLNLPLAFFGIFRAKTLIDEDLSTPWADEIEQKVLSSPEVGIGPYVEVAFYHKPSRTLLVT 254 (453)
Q Consensus 175 ~~~~fP~AkV~a~pg~~s~p~~lpl~~~gi~~~~~L~~~~~~~pw~de~e~~~l~~~~~G~~~~~EvvffHk~SrTLIvt 254 (453)
|++++ +|++|+.+.....-...| +..+.+ ......+++...+. +|.....+++|.++++|+++
T Consensus 73 ~~~~~-~a~i~~~~~~~~~~~~~p--------d~~~~~---~~~~~~~~~vi~~p-----GH~~~~~~~~~~~~~~Lf~G 135 (200)
T d2p97a1 73 IADQT-YTKIAGPVAEKENFPIYC--------DRWLSD---GDELVPGLKVMELQ-----GSKTPGELALLLEETTLITG 135 (200)
T ss_dssp HHHHS-CCEEEEEGGGTTSCSSCC--------SEEECT---TCBSSTTEEEEEEC-----SSSSTTEEEEEETTTEEEEC
T ss_pred HHHhc-CceEEeeccccccccccc--------eEeccc---ccccceeEEEEEeC-----CcCCCCEeEEecccceEEEC
Confidence 99999 999999876543210111 112221 12233567766666 45455566788999999999
Q ss_pred cccccCCCCCCCccchhhhhHhhhcchhhhhhccCCCCCCCCccCCccccchhHHHHHHHHHhhCCCCCCCCchhHHhhh
Q 012903 255 DAVIFVPRKPPECISKESLLASAKNGLAVKILSKGKEVPQEPVVDNPMNQQKGWERMVLQILFLGPSNLLEPNASFAQMS 334 (453)
Q Consensus 255 Dll~nlp~~ppe~~s~~~Ll~~a~~g~~~~ll~~~~~~~~~~~~dt~~~r~~gW~R~~L~~~yf~P~~l~~p~~sF~~l~ 334 (453)
|++++.+.. ... ..+ .
T Consensus 136 D~l~~~~~g---~~~------------------------------------------------~~~------~------- 151 (200)
T d2p97a1 136 DLVRAYRAG---GLE------------------------------------------------ILP------D------- 151 (200)
T ss_dssp SSEEBSSTT---SCE------------------------------------------------ECC------G-------
T ss_pred CEeeccCCC---cce------------------------------------------------ecC------C-------
Confidence 999875311 000 000 0
Q ss_pred ccccccceEeeeeeccChHHHHHHHHHHHccC-CCCEEEecCCCccccChHHHHHHHHHHH
Q 012903 335 QKLIVSPIVKTLVFSKVPEKVRDWIDRIVCDW-RFRRIIPAHFAAPINASRSDFLAAFAFL 394 (453)
Q Consensus 335 ~~l~V~Pil~~Lvf~~~~~~~r~wv~~I~~~W-dferIIpaHGd~~i~~g~~~fr~aF~~L 394 (453)
.+..+.++.++++++++ ++ ++++|+|+||..+.+++++.+++..++|
T Consensus 152 ------------~~~~~~~~~~~sl~rl~-~l~~~~~i~pgHG~~~~~~~~~rl~~l~~~~ 199 (200)
T d2p97a1 152 ------------EKLMNKQKVVASVRRLA-ALEKVEAVLVGDGWSVFRDGRDRLKELVATL 199 (200)
T ss_dssp ------------GGCSCHHHHHHHHHHHH-TCTTCCEEEESBBCCBCSCHHHHHHHHHHHH
T ss_pred ------------cccchHHHHHHHHHHHh-cCCCCcEEECCCCchHhcCHHHHHHHHHHhh
Confidence 00236678889999999 78 6899999999888899999999998865
|
| >d1mqoa_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
| >d2q0ia1 d.157.1.14 (A:1-298) Quinolone signal response protein PqsE {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
| >d1x8ha_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Aeromonas hydrophila, CphA [TaxId: 644]} | Back information, alignment and structure |
|---|
| >d1ycga2 d.157.1.3 (A:2-250) Nitric oxide reductase N-terminal domain {Moorella thermoacetica [TaxId: 1525]} | Back information, alignment and structure |
|---|
| >d1jjta_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomonas aeruginosa, IMP-1 [TaxId: 287]} | Back information, alignment and structure |
|---|
| >d1znba_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacteroides fragilis [TaxId: 817]} | Back information, alignment and structure |
|---|
| >d1m2xa_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Chryseobacterium meningosepticum, carbapenemase BLAB-1 [TaxId: 238]} | Back information, alignment and structure |
|---|
| >d1ko3a_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomonas aeruginosa, VIM-2 [TaxId: 287]} | Back information, alignment and structure |
|---|
| >d1e5da2 d.157.1.3 (A:2-250) Rubredoxin oxygen:oxidoreductase (ROO), N-terminal domain {Desulfovibrio gigas [TaxId: 879]} | Back information, alignment and structure |
|---|
| >d2cfua2 d.157.1.13 (A:20-524) Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
| >d1vmea2 d.157.1.3 (A:1-250) ROO-like flavoprotein TM0755, N-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d2aioa1 d.157.1.1 (A:23-311) Zn metallo-beta-lactamase {Xanthomonas maltophilia [TaxId: 40324]} | Back information, alignment and structure |
|---|
| >d2gmna1 d.157.1.1 (A:29-292) Zn metallo-beta-lactamase {Bradyrhizobium japonicum [TaxId: 375]} | Back information, alignment and structure |
|---|
| >d1k07a_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Fluoribacter gormanii, (Legionella gormanii) FEZ-1 [TaxId: 464]} | Back information, alignment and structure |
|---|
| >d2qeda1 d.157.1.2 (A:1-251) Glyoxalase II (hydroxyacylglutathione hydrolase) {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d1xm8a_ d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathione hydrolase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1qh5a_ d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathione hydrolase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ztca1 d.157.1.11 (A:1-207) Hypothetical protein TM0894 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1p9ea_ d.157.1.5 (A:) Methyl parathion hydrolase {Pseudomonas sp. WBC-3 [TaxId: 165468]} | Back information, alignment and structure |
|---|