Citrus Sinensis ID: 012913

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450---
MSLLSPSSFFFLSLLLVLPLSLASSYPYKASYRIDCGSATSTTDPFNTTWQADDRYYTSGATSIVSEPLHFRFPHEKTLRYFPPSSGKKNCYIIPNLPPGRYYIRTFTVYDNYDGKSHSPSFDVSVEGTLVFSWRSPWPEGLARDGAYSDLFAFVKDGELDLCFYSFATDPPVIASLEVQQIDPLSYDAATIGNNHILVNYGRLTSGSNQWGPGFSNDADDFGRSWQSDAASRSPNAKSSIKSVTTRERITNTNQPPNYYPMKLYQTAIVSSGAIQYNLAVDAKLDYLIWFHFAEIDSSVTKAGQRVFDILVNDKNVTRVDIFNSVGSFAAYSWHYVAKNLSSTELTVKLVPVVGAALISGLENYALVPNDLSTVPEQVIAMRALKESLRVPDRMGWNGDPCAPTNWDAWEGITCHPNKDETAVVISQIDLGSQGLKGYISDKISLLSNLVNL
cccccHHHHHHHHHHHHHHHHHcccccccccEEEccccccccccccccEEEcccccccccccEEEccccccccccccEEEEEccccccccEEEEEcccccEEEEEEEEEccccccccccccEEEEEEcEEEEEEcccccccccccccEEEEEEEEEcccEEEEEEEccccccEEEEEEEEEccccccccccccccccEEEEEEEccccccccccccccccccccccccccccccccccccEEEEEEEEEEEcccccccccHHHHHHccccccccEEEEEcccccccEEEEEEEEEcccccccccEEEEEEEEccEEEcccccccccccEEEEEEEEEEEcccccEEEEEEcccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccEEEEEEccccccEEEcccccccccccccc
cHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEcccccccccccccEEEccccHcccccccccccccccccccccEEEEcccccccccEEEEEcccccEEEEEEEEEEcccccccccccEEEEEcccEEEEEEEEEccccccccEEEEEEEEcccccEEEEEEEccccccEEEEEEEcccccccccccccccccEEEEEEEEcccccccccEEEccccccccEEccccccccccccccccEccccccccccccccccccHHHHHHcccccccEEEEccccccccEEEEEEEHHHHHHcccccEEEEEEEEcccccccccccccccccEEEcccccccccEEEEEEEEccccccccEEEHEEEEEEEEccccccHHHHHHHHHHHHHcccccccccccccccccHHcccccEEEcccccccccEEEEEEEccccccccccHHHHHHHHHccc
msllspssfFFLSLLLVLPlslassypykasyridcgsatsttdpfnttwqaddryytsgatsivseplhfrfphektlryfppssgkkncyiipnlppgryyirtftvydnydgkshspsfdvsvegtlvfswrspwpeglardgaySDLFAFvkdgeldlcfysfatdppviaslevqqidplsydaatignnhILVNygrltsgsnqwgpgfsndaddfgrswqsdaasrspnakssiksvttreritntnqppnyypmklYQTAIVSSGAIQYNLAVDAKLDYLIWFHFAEIDSSVTKAGQRVFDILVndknvtrvdIFNSVGSFAAYSWHYVAKNlssteltvKLVPVVGAALISglenyalvpndlstVPEQVIAMRALKEslrvpdrmgwngdpcaptnwdawegitchpnkdeTAVVISQIDlgsqglkgyiSDKISLLSNLVNL
MSLLSPSSFFFLSLLLVLPLSLASSYPYKASYRIDCGsatsttdpfnttwQADDRYYTSGATSIVSEPLHFRFPHEKTlryfppssgkkncYIIPNLPPGRYYIRTFTVYDNYDGKSHSPSFDVSVEGTLVFSWRSPWPEGLARDGAYSDLFAFVKDGELDLCFYSFATDPPVIASLEVQQIDPLSYDAATIGNNHILVNYGRLTSGSNQWGPGFSNDADDFGRSWqsdaasrspnakssiksvttreritntnqppnyypMKLYQTAIVSSGAIQYNLAVDAKLDYLIWFHFAEIDSSVTKAGQRVFDILVNDKNVTRVDIFNSVGSFAAYSWHYVAKNLSSTELTVKLVPVVGAALISGLENYALVPNDLSTVPEQVIAMRALKEslrvpdrmgwNGDPCAPTNWDAWEGITCHPNKDETAVVISQIDLGSQGLKGYISDKISLLSNLVNL
MsllspssffflslllvlplslassYPYKASYRIDCGSATSTTDPFNTTWQADDRYYTSGATSIVSEPLHFRFPHEKTLRYFPPSSGKKNCYIIPNLPPGRYYIRTFTVYDNYDGKSHSPSFDVSVEGTLVFSWRSPWPEGLARDGAYSDLFAFVKDGELDLCFYSFATDPPVIASLEVQQIDPLSYDAATIGNNHILVNYGRLTSGSNQWGPGFSNDADDFGRSWQSDAASRSPNAKSSIKSVTTRERITNTNQPPNYYPMKLYQTAIVSSGAIQYNLAVDAKLDYLIWFHFAEIDSSVTKAGQRVFDILVNDKNVTRVDIFNSVGSFAAYSWHYVAKNLSSTELTVKLVPVVGAALISGLENYALVPNDLSTVPEQVIAMRALKESLRVPDRMGWNGDPCAPTNWDAWEGITCHPNKDETAVVISQIDLGSQGLKGYISDKISLLSNLVNL
*******SFFFLSLLLVLPLSLASSYPYKASYRIDCGSATSTTDPFNTTWQADDRYYTSGATSIVSEPLHFRFPHEKTLRYFPPSSGKKNCYIIPNLPPGRYYIRTFTVYDNYDGKSHSPSFDVSVEGTLVFSWRSPWPEGLARDGAYSDLFAFVKDGELDLCFYSFATDPPVIASLEVQQIDPLSYDAATIGNNHILVNYGRLTSGSNQW**********************************************NYYPMKLYQTAIVSSGAIQYNLAVDAKLDYLIWFHFAEIDSSVTKAGQRVFDILVNDKNVTRVDIFNSVGSFAAYSWHYVAKNLSSTELTVKLVPVVGAALISGLENYALVPNDLSTVPEQVIAMRALKESLRVPDRMGWNGDPCAPTNWDAWEGITCHPNKDETAVVISQIDLGSQGLKGYISDKISLLS*****
******SSFFFLSLLLVLPLSLASSYPYKASYRIDCGSATSTTDPFNTTWQADDRYYTSG************FPHEKTLRYFPPSSGKKNCYIIPNLPPGRYYIRTFTVYDNYDGKSHSPSFDVSVEGTLVFSWRSPWPEGLARDGAYSDLFAFVKDGELDLCFYSFATDPPVIASLEVQQIDPLSYDAATIGNNHILVNYGRLTSGSNQWGPGFSNDADDFGRSWQSDAASRSPNAKSSIKSVTTRERITNTNQPPNYYPMKLYQTAIVSSGAIQYNLAVDAKLDYLIWFHFAEIDSSVTKAGQRVFDILVNDKNVTRVDIFNSVGSFAAYSWHYVAKNLSSTELTVKLVPVVGAALISGLENYALVPNDLSTVPEQVIAMRALKESLRVPDRMGWNGDPCAPTNWDAWEGITCHPNKDETAVVISQIDLGSQGLKGYISDKISLLSNLVNL
MSLLSPSSFFFLSLLLVLPLSLASSYPYKASYRIDCGSATSTTDPFNTTWQADDRYYTSGATSIVSEPLHFRFPHEKTLRYFPPSSGKKNCYIIPNLPPGRYYIRTFTVYDNYDGKSHSPSFDVSVEGTLVFSWRSPWPEGLARDGAYSDLFAFVKDGELDLCFYSFATDPPVIASLEVQQIDPLSYDAATIGNNHILVNYGRLTSGSNQWGPGFSNDADDFGRS********************TRERITNTNQPPNYYPMKLYQTAIVSSGAIQYNLAVDAKLDYLIWFHFAEIDSSVTKAGQRVFDILVNDKNVTRVDIFNSVGSFAAYSWHYVAKNLSSTELTVKLVPVVGAALISGLENYALVPNDLSTVPEQVIAMRALKESLRVPDRMGWNGDPCAPTNWDAWEGITCHPNKDETAVVISQIDLGSQGLKGYISDKISLLSNLVNL
MSLLSPSSFFFLSLLLVLPLSLASSYPYKASYRIDCGSATSTTDPFNTTWQADDRYYTSGATSIVSEPLHFRFPHEKTLRYFPPSSGKKNCYIIPNLPPGRYYIRTFTVYDNYDGKSHSPSFDVSVEGTLVFSWRSPWPEGLARDGAYSDLFAFVKDGELDLCFYSFATDPPVIASLEVQQIDPLSYDAATIGNNHILVNYGRLTSGSNQWGPGFSNDADDFGRSWQSDAASRSPNAKSSIKSVTTRERITNTNQPPNYYPMKLYQTAIVSSGAIQYNLAVDAKLDYLIWFHFAEIDSSVTKAGQRVFDILVNDKNVTRVDIFNSVGSFAAYSWHYVAKNLSSTELTVKLVPVVGAALISGLENYALVPNDLSTVPEQVIAMRALKESLRVPDRMGWNGDPCAPTNWDAWEGITCHPNKDETAVVISQIDLGSQGLKGYISDKISLLSNLV*L
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSLLSPSSFFFLSLLLVLPLSLASSYPYKASYRIDCGSATSTTDPFNTTWQADDRYYTSGATSIVSEPLHFRFPHEKTLRYFPPSSGKKNCYIIPNLPPGRYYIRTFTVYDNYDGKSHSPSFDVSVEGTLVFSWRSPWPEGLARDGAYSDLFAFVKDGELDLCFYSFATDPPVIASLEVQQIDPLSYDAATIGNNHILVNYGRLTSGSNQWGPGFSNDADDFGRSWQSDAASRSPNAKSSIKSVTTRERITNTNQPPNYYPMKLYQTAIVSSGAIQYNLAVDAKLDYLIWFHFAEIDSSVTKAGQRVFDILVNDKNVTRVDIFNSVGSFAAYSWHYVAKNLSSTELTVKLVPVVGAALISGLENYALVPNDLSTVPEQVIAMRALKESLRVPDRMGWNGDPCAPTNWDAWEGITCHPNKDETAVVISQIDLGSQGLKGYISDKISLLSNLVNL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query453 2.2.26 [Sep-21-2011]
Q9FZB1 872 Probable LRR receptor-lik no no 0.836 0.434 0.278 8e-27
O81069 884 Probable leucine-rich rep no no 0.849 0.435 0.251 3e-21
C0LGG6 876 Probable LRR receptor-lik no no 0.902 0.466 0.265 9e-21
Q9FZB8 871 Probable LRR receptor-lik no no 0.887 0.461 0.252 4e-20
C0LGD8 864 Probable LRR receptor-lik no no 0.860 0.451 0.270 5e-20
Q9SNA3 889 Putative receptor-like pr no no 0.852 0.434 0.251 2e-19
C0LGT5 866 Probable LRR receptor-lik no no 0.757 0.396 0.255 2e-19
Q9LIG2 899 Receptor-like protein kin no no 0.900 0.453 0.254 3e-19
Q9FN94 868 Receptor-like protein kin no no 0.849 0.443 0.256 3e-19
C0LGG4 890 Probable LRR receptor-lik no no 0.900 0.458 0.268 4e-19
>sp|Q9FZB1|Y5188_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1 Back     alignment and function desciption
 Score =  122 bits (305), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 125/449 (27%), Positives = 203/449 (45%), Gaps = 70/449 (15%)

Query: 34  IDCG----SATSTTDPFNTTWQADDRYYTSGATSIVSEPLHFRFPHEK-TLRYFPPSSGK 88
           +DCG    +AT T    N T+++D  Y  SG    +S     +   +  T+R FP   G+
Sbjct: 32  LDCGLVPKNATYTEKTTNITYKSDANYIDSGLVGRISAEYKAQLQQQTWTVRSFP--EGE 89

Query: 89  KNCYIIPNLPPGRYYIRTFTVYDNYDGKSHSPSFDVSVEGTLVFSWRSPWPEGLARDGAY 148
           +NCY        RY IR    Y NYDG    P FD+ +  +    W S   +G+  +GA 
Sbjct: 90  RNCYNFNLTAKSRYLIRATFTYGNYDGLRQVPKFDIHIGPS---KWTSVKLDGVG-NGAV 145

Query: 149 SDLFAFVKDGELDLCFYSFATDPPVIASLEVQQIDPLSYDAATIGNNHILVNYGRLTSGS 208
            ++   +    L +C        P I+SLE++ ++  +Y    +  +  L+ + R+   +
Sbjct: 146 LEMIHVLTQDRLQICLVKTGKGIPFISSLELRPLNNNTY----LTQSGSLIGFARVFFSA 201

Query: 209 NQWGPGFSN-DADDFGRSWQSDAASRSPNAKSSIKSVTTRERITNTNQPPNYYPMKLYQT 267
               P F   D D   R W            + +KS++T   +  +N  P   P  + +T
Sbjct: 202 T---PTFIRYDEDIHDRVWVRQFG-------NGLKSISTDLLVDTSN--PYDVPQAVAKT 249

Query: 268 AIVSSGAIQYNLAVDAKLDYL-----IWFHFAEI----DSSVTK------AGQRVFDILV 312
           A V S A Q  L  D  LD +     ++ HFAEI    D+ + +       GQ V+  L 
Sbjct: 250 ACVPSNASQ-PLIFDWTLDNITSQSYVYMHFAEIQTLKDNDIREFNITYNGGQNVYSYLR 308

Query: 313 NDKNVTRVDIFNSV------GSFAAYSWHYVAKNLSSTELTVKLVPVVGAALISGLENYA 366
            +K      +F+S       GSF+          LS T+     +P     LI+GLE Y 
Sbjct: 309 PEKFEIST-LFDSKPLSSPDGSFS----------LSFTKTGNSTLP----PLINGLEIYK 353

Query: 367 LVP-NDLSTVPEQVIAMRALKESLRVPDRMGWNGDPCAPTNWDAWEGITC-HPNKDETAV 424
           ++   +L T  ++V AM  +K +  +  ++ W GDPCAP ++  WEG+ C +PN D+  +
Sbjct: 354 VLDLLELETDQDEVSAMINIKATYDLSKKVSWQGDPCAPKSYQ-WEGLNCSYPNSDQPRI 412

Query: 425 VISQIDLGSQGLKGYISDKISLLSNLVNL 453
           +   ++L    L G I+ +IS L+ L+ L
Sbjct: 413 I--SLNLAENKLTGTITPEISKLTQLIEL 439

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1
>sp|O81069|Y2899_ARATH Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana GN=At2g28990 PE=2 SV=1 Back     alignment and function description
>sp|C0LGG6|Y5189_ARATH Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2 Back     alignment and function description
>sp|Q9FZB8|Y5181_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1 Back     alignment and function description
>sp|C0LGD8|Y1755_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g07550 OS=Arabidopsis thaliana GN=At1g07550 PE=2 SV=1 Back     alignment and function description
>sp|Q9SNA3|Y3463_ARATH Putative receptor-like protein kinase At3g46340 OS=Arabidopsis thaliana GN=At3g46340 PE=3 SV=1 Back     alignment and function description
>sp|C0LGT5|Y5169_ARATH Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1 Back     alignment and function description
>sp|Q9LIG2|RLK6_ARATH Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1 Back     alignment and function description
>sp|Q9FN94|RLK7_ARATH Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1 Back     alignment and function description
>sp|C0LGG4|Y1518_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query453
255566849 674 serine-threonine protein kinase, plant-t 0.938 0.630 0.755 0.0
225423893 630 PREDICTED: Di-glucose binding protein wi 0.986 0.709 0.691 0.0
449445156 626 PREDICTED: putative leucine-rich repeat 0.964 0.698 0.697 0.0
449526481 591 PREDICTED: receptor-like protein kinase 0.964 0.739 0.697 0.0
42562316 628 Di-glucose binding protein with Leucine- 0.909 0.656 0.692 1e-173
356499717 636 PREDICTED: putative leucine-rich repeat 0.927 0.660 0.675 1e-173
12320747 585 hypothetical protein [Arabidopsis thalia 0.909 0.704 0.692 1e-173
356498336 642 PREDICTED: putative leucine-rich repeat 0.938 0.661 0.655 1e-172
357488299 632 Receptor-like protein kinase [Medicago t 0.973 0.697 0.640 1e-168
356574639 626 PREDICTED: probable LRR receptor-like se 0.975 0.706 0.599 1e-155
>gi|255566849|ref|XP_002524408.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223536369|gb|EEF38019.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  695 bits (1793), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/429 (75%), Positives = 374/429 (87%), Gaps = 4/429 (0%)

Query: 27  PYKASYRIDCGSATSTTDPFNTTWQADDRYYTSGATSIVSEPLHFRFPHEKTLRYFPPSS 86
           PY  SY IDCG  T+TTDPFNTTW +D R++T G+TS+VSEPLHFRFP EK LRYFP SS
Sbjct: 19  PYDISYYIDCGGPTNTTDPFNTTWLSD-RFFTGGSTSVVSEPLHFRFPQEKNLRYFPLSS 77

Query: 87  GKKNCYIIPNLPPGRYYIRTFTVYDNYDGKSHSPSFDVSVEGTLVFSWRSPWPEGLARDG 146
           GKKNCYI+P LP GRYYIRTFTVYDNYDGK HSPSFDVSVEGTLVFSWRSPW E LARDG
Sbjct: 78  GKKNCYILP-LPNGRYYIRTFTVYDNYDGKLHSPSFDVSVEGTLVFSWRSPWSENLARDG 136

Query: 147 AYSDLFAFVKDGELDLCFYSFATDPPVIASLEVQQIDPLSYDAATIGNNHILVNYGRLTS 206
           AYSDLF F+ DGE D+CFYS ATDPPVI SLE++Q+DP SYD+ T+GNN ILVNYGRL+ 
Sbjct: 137 AYSDLFTFIDDGEADICFYSIATDPPVIGSLEIRQVDPASYDSITVGNNSILVNYGRLSC 196

Query: 207 GSNQWGPGFSNDADDFGRSWQSDAASRSPNAKSSI--KSVTTRERITNTNQPPNYYPMKL 264
           GS QWGPGFSND D+FGRSWQSD   R+P    ++  +S++TRE+I+ T+QPPNY+PMKL
Sbjct: 197 GSVQWGPGFSNDTDNFGRSWQSDLEFRTPTTTKTMAFRSLSTREKISGTDQPPNYFPMKL 256

Query: 265 YQTAIVSSGAIQYNLAVDAKLDYLIWFHFAEIDSSVTKAGQRVFDILVNDKNVTRVDIFN 324
           YQTA+  +GA++Y L VDAKLDYL+WFHFAEIDS+VTK GQRVFD++VNDKN +RVDIF 
Sbjct: 257 YQTAVTGNGALEYELTVDAKLDYLLWFHFAEIDSTVTKKGQRVFDVVVNDKNASRVDIFA 316

Query: 325 SVGSFAAYSWHYVAKNLSSTELTVKLVPVVGAALISGLENYALVPNDLSTVPEQVIAMRA 384
           +VGSFAAYS+ Y  +NLS+  LTVK+VP +GA LISG+ENYALVPND+ST P+QV AMRA
Sbjct: 317 AVGSFAAYSFSYAVRNLSNGALTVKIVPHIGAPLISGIENYALVPNDISTAPDQVAAMRA 376

Query: 385 LKESLRVPDRMGWNGDPCAPTNWDAWEGITCHPNKDETAVVISQIDLGSQGLKGYISDKI 444
           LKESLRVPDRMGWNGDPCAPTNWDAWEG+TCHPNK+ TA+VISQIDLGSQGLKGYI+D+I
Sbjct: 377 LKESLRVPDRMGWNGDPCAPTNWDAWEGVTCHPNKNGTALVISQIDLGSQGLKGYINDQI 436

Query: 445 SLLSNLVNL 453
           S LSNLV+L
Sbjct: 437 SQLSNLVSL 445

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225423893|ref|XP_002281668.1| PREDICTED: Di-glucose binding protein with Leucine-rich repeat domain-like [Vitis vinifera] gi|297737862|emb|CBI27063.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449445156|ref|XP_004140339.1| PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449526481|ref|XP_004170242.1| PREDICTED: receptor-like protein kinase At3g21340-like, partial [Cucumis sativus] Back     alignment and taxonomy information
>gi|42562316|ref|NP_564237.2| Di-glucose binding protein with Leucine-rich repeat domain [Arabidopsis thaliana] gi|332192522|gb|AEE30643.1| Di-glucose binding protein with Leucine-rich repeat domain [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356499717|ref|XP_003518683.1| PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440-like [Glycine max] Back     alignment and taxonomy information
>gi|12320747|gb|AAG50525.1|AC084221_7 hypothetical protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356498336|ref|XP_003518009.1| PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440-like [Glycine max] Back     alignment and taxonomy information
>gi|357488299|ref|XP_003614437.1| Receptor-like protein kinase [Medicago truncatula] gi|355515772|gb|AES97395.1| Receptor-like protein kinase [Medicago truncatula] Back     alignment and taxonomy information
>gi|356574639|ref|XP_003555453.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g16900-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query453
TAIR|locus:2031175 628 AT1G25570 [Arabidopsis thalian 0.938 0.676 0.687 4.2e-166
TAIR|locus:2032221 626 RLP4 "receptor like protein 4" 0.916 0.662 0.350 6.4e-60
TAIR|locus:2094103519 AT3G19230 [Arabidopsis thalian 0.883 0.770 0.278 7e-31
TAIR|locus:2195855 876 AT1G51910 [Arabidopsis thalian 0.865 0.447 0.283 2e-27
TAIR|locus:2028446 888 AT1G49100 [Arabidopsis thalian 0.876 0.447 0.265 1.3e-22
TAIR|locus:2024987 864 AT1G07550 [Arabidopsis thalian 0.858 0.450 0.271 1.6e-22
TAIR|locus:2083023517 AT3G05990 [Arabidopsis thalian 0.852 0.746 0.270 2.2e-21
TAIR|locus:2126540 876 AT4G29990 [Arabidopsis thalian 0.858 0.444 0.263 2.6e-21
TAIR|locus:2078171 883 AT3G46400 [Arabidopsis thalian 0.874 0.448 0.255 8.2e-21
TAIR|locus:2055160 886 AT2G14440 [Arabidopsis thalian 0.856 0.437 0.257 1.3e-20
TAIR|locus:2031175 AT1G25570 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1616 (573.9 bits), Expect = 4.2e-166, P = 4.2e-166
 Identities = 295/429 (68%), Positives = 357/429 (83%)

Query:    27 PYKASYRIDCGSATSTTDPFNTTWQADDRYYTSGATSIVSEPLHFRFPHEKTLRYFPPSS 86
             P+  S+ IDCGS  ++TD FN TW   D++Y+ G+T++VSEPL F    EKT+RYFP S 
Sbjct:    25 PFNTSFFIDCGSPETSTDVFNRTW-LPDQFYSGGSTAVVSEPLRFHLIAEKTIRYFPLSF 83

Query:    87 GKKNCYIIPNLPPGRYYIRTFTVYDNYDGKSHSPSFDVSVEGTLVFSWRSPWPEGLARDG 146
             GKKNCY++P LPPGRYY+RTFTVYDNYDGKSHSPSFDVSVEGTLVFSWRSPWPE L RDG
Sbjct:    84 GKKNCYVVP-LPPGRYYLRTFTVYDNYDGKSHSPSFDVSVEGTLVFSWRSPWPESLLRDG 142

Query:   147 AYSDLFAFVKDGELDLCFYSFATDPPVIASLEVQQIDPLSYDAATIGNNHILVNYGRLTS 206
             +YSDLFAF+ DGELDLCFYS ATDPP++ SLEV Q+DP SYDA   G N +LVNYGRL+ 
Sbjct:   143 SYSDLFAFIGDGELDLCFYSIATDPPIVGSLEVLQVDPSSYDADGTGQNVLLVNYGRLSC 202

Query:   207 GSNQWGPGFSNDADDFGRSWQSDAASRSPNAKSSIKSVTTRERITNTNQPPNYYPMKLYQ 266
             GS+QWGPGF+N  D+FGRSWQSD   RS +++S  +S++T E+I   +Q PNY+PMKLYQ
Sbjct:   203 GSDQWGPGFTNHTDNFGRSWQSDEDFRSEDSRSVARSLSTLEKIKGVDQAPNYFPMKLYQ 262

Query:   267 TAIVSSG--AIQYNLAVDAKLDYLIWFHFAEIDSSVTKAGQRVFDILVNDKNVTRVDIFN 324
             TA+  SG  ++ Y L VDAKLDYL+WFHF+EIDS+V KAGQRVFD++VND NV+RVD+F+
Sbjct:   263 TAVTVSGGGSLVYELEVDAKLDYLLWFHFSEIDSTVKKAGQRVFDLVVNDNNVSRVDVFH 322

Query:   325 SVGSFAAYSWHYVAKNLSSTELTVKLVPVVGAALISGLENYALVPNDLSTVPEQVIAMRA 384
              VG FAAYS +Y  KNLSST +TVKL  V GA +ISGLENYA+VP D++TVPEQV AM+A
Sbjct:   323 EVGGFAAYSLNYTVKNLSSTIVTVKLSSVSGAPIISGLENYAIVPADMATVPEQVTAMKA 382

Query:   385 LKESLRVPDRMGWNGDPCAPTNWDAWEGITCHPNKDETAVVISQIDLGSQGLKGYISDKI 444
             LK+SLRVPDRMGWNGDPCAPT+WDAWEG++C PN   +A+VI QIDLGSQGLKG+IS++I
Sbjct:   383 LKDSLRVPDRMGWNGDPCAPTSWDAWEGVSCRPNSQGSALVIFQIDLGSQGLKGFISEQI 442

Query:   445 SLLSNLVNL 453
             SLL+NL +L
Sbjct:   443 SLLTNLNSL 451
GO:0005886 "plasma membrane" evidence=ISM;IDA
GO:0005773 "vacuole" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0005768 "endosome" evidence=IDA
GO:0005802 "trans-Golgi network" evidence=IDA
TAIR|locus:2032221 RLP4 "receptor like protein 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2094103 AT3G19230 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2195855 AT1G51910 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2028446 AT1G49100 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2024987 AT1G07550 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2083023 AT3G05990 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2126540 AT4G29990 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2078171 AT3G46400 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2055160 AT2G14440 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query453
PLN03150 623 PLN03150, PLN03150, hypothetical protein; Provisio 3e-92
pfam12819335 pfam12819, Malectin_like, Carbohydrate-binding pro 2e-58
pfam11721164 pfam11721, Malectin, Di-glucose binding within end 1e-11
pfam11721164 pfam11721, Malectin, Di-glucose binding within end 2e-07
>gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional Back     alignment and domain information 
 Score =  291 bits (747), Expect = 3e-92
 Identities = 159/455 (34%), Positives = 230/455 (50%), Gaps = 22/455 (4%)

Query: 9   FFFLSLLLVLPLSLASSYPYKASYRIDCGS-ATSTTDPFNTTWQADDRYYTSGATSIVSE 67
               S LL +  SLAS  P+  + RI CG+     T P NT W   D  YT G  +  + 
Sbjct: 5   LLAASALLAVLASLASPEPF--TMRISCGARVNVRTAPTNTLW-YKDFAYTGGIPANATR 61

Query: 68  PLHFRFPHEKTLRYFPPSSGKKNCYIIPNLPPGRYYIRTFTVYDNYDGKSHSPSFDVSVE 127
           P  F  P  KTLRYFP S G +NCY I  +P G Y +R F            P FDVSVE
Sbjct: 62  P-SFIAPPLKTLRYFPLSDGPENCYNINRVPKGHYSVRVFFGLVAEPNFDSEPLFDVSVE 120

Query: 128 GTLVFSWRSPWPEGLARDGAYSDLFAFVKDGELDLCFYSFATDPPVIASLEVQQIDPLSY 187
           GT + S +S W      +  +++   F+ DG   +CF+S     P I S+E+ Q+D  +Y
Sbjct: 121 GTQISSLKSGWSS--HDEQVFAEALVFLTDGSASICFHSTGHGDPAILSIEILQVDDKAY 178

Query: 188 D-AATIGNNHILVNYGRLTSGSNQWGPGFSNDADDFGRSWQSDA--ASRSPNAKSSIKSV 244
           +   + G   IL    RL+ G+ +    F  D D  G  W  D            S +++
Sbjct: 179 NFGPSWGQGVILRTAKRLSCGAGK--SKF--DEDYSGDHWGGDRFWNRMQTFGSGSDQAI 234

Query: 245 TTRERITNTNQPPNYYPMKLYQTAIVSSG---AIQYNLAVDAKLDYLIWFHFAEIDSSVT 301
           +T   I   +  PN+YP  LYQ+A+VS+     + Y + VD   +Y +W HFAEID+S+T
Sbjct: 235 STENVIKKASNAPNFYPESLYQSALVSTDTQPDLSYTMDVDPNRNYSVWLHFAEIDNSIT 294

Query: 302 KAGQRVFDILVN-DKNVTRVDIFNSVGS-FAAYSWHYVAKNLSSTELTVKLVPVVGA-AL 358
             G+RVFD+L+N D     VDI    G  + A   +     +S   LT+ L P  G  A+
Sbjct: 295 AEGKRVFDVLINGDTAFKDVDIVKMSGERYTALVLNKTVA-VSGRTLTIVLQPKKGTHAI 353

Query: 359 ISGLENYALVPNDLSTVPEQVIAMRALKESLRVPDRMGWNGDPCAPTNWDAWEGITCHPN 418
           I+ +E + ++  +  T+ E+V A++ LK SL +P R GWNGDPC P     W G  C  +
Sbjct: 354 INAIEVFEIITAESKTLLEEVSALQTLKSSLGLPLRFGWNGDPCVPQQ-HPWSGADCQFD 412

Query: 419 KDETAVVISQIDLGSQGLKGYISDKISLLSNLVNL 453
             +    I  + L +QGL+G+I + IS L +L ++
Sbjct: 413 STKGKWFIDGLGLDNQGLRGFIPNDISKLRHLQSI 447

Length = 623
>gnl|CDD|221790 pfam12819, Malectin_like, Carbohydrate-binding protein of the ER Back     alignment and domain information
>gnl|CDD|221187 pfam11721, Malectin, Di-glucose binding within endoplasmic reticulum Back     alignment and domain information
>gnl|CDD|221187 pfam11721, Malectin, Di-glucose binding within endoplasmic reticulum Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 453
PLN03150 623 hypothetical protein; Provisional 100.0
PF12819347 Malectin_like: Carbohydrate-binding protein of the 100.0
PF11721174 Malectin: Di-glucose binding within endoplasmic re 99.87
PF11721174 Malectin: Di-glucose binding within endoplasmic re 99.71
PLN03150623 hypothetical protein; Provisional 99.41
PF12819347 Malectin_like: Carbohydrate-binding protein of the 99.37
KOG3593355 consensus Predicted receptor-like serine/threonine 98.02
PF0826343 LRRNT_2: Leucine rich repeat N-terminal domain; In 97.59
PLN00113 968 leucine-rich repeat receptor-like protein kinase; 97.48
KOG3593355 consensus Predicted receptor-like serine/threonine 94.24
PF0056022 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Le 87.28
PF1279944 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_ 81.31
>PLN03150 hypothetical protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=9.2e-82  Score=677.59  Aligned_cols=424  Identities=35%  Similarity=0.642  Sum_probs=341.2

Q ss_pred             hhccccCCCCccEEEecCCCCCc-cCCCCCeEeeCCCCccCCCcccccCCCCCCCcccceeeeeCCCCCCCceEEeecCC
Q 012913           20 LSLASSYPYKASYRIDCGSATST-TDPFNTTWQADDRYYTSGATSIVSEPLHFRFPHEKTLRYFPPSSGKKNCYIIPNLP   98 (453)
Q Consensus        20 ~~~~~~~~~~~~~~IdCG~~~~~-~d~~~~~w~~Dd~~~~~g~~~~~~~~~~~~~~~y~t~R~F~~~~g~~~cY~lpv~~   98 (453)
                      +.++++.+.+++|+||||++++. +|.+||+|++|..+ ..|.....+.+ ....++|+|+|+||.++|+++||+||+.+
T Consensus        14 ~~~~~~~~~~~~~~I~CGs~~~~~~d~~~~~w~~D~~~-~~~~~~~~~~~-~~~~~~~~t~R~F~~~~g~~~cY~~~~~~   91 (623)
T PLN03150         14 VLASLASPEPFTMRISCGARVNVRTAPTNTLWYKDFAY-TGGIPANATRP-SFIAPPLKTLRYFPLSDGPENCYNINRVP   91 (623)
T ss_pred             hhcccccCCCccEEEeCCCCCCcccCCCCCEEcCCccc-ccCccccccCc-ccccchhhccccCCcccccccceEeeecC
Confidence            33444455667799999999876 67899999997443 43433322222 23457899999999877999999999888


Q ss_pred             CccEEEEEEeecCCCCCCCCCCcEEEEECCEEEEecCCCCCcccCCCceEEEEEEEecCCeeEEEEeecCCCCceeeeeE
Q 012913           99 PGRYYIRTFTVYDNYDGKSHSPSFDVSVEGTLVFSWRSPWPEGLARDGAYSDLFAFVKDGELDLCFYSFATDPPVIASLE  178 (453)
Q Consensus        99 ~g~ylvRl~F~y~nyd~~~~~~~Fdv~~~~~~~l~~~~~~~~~~~~~~~~~E~i~~~~~~~l~vcf~~~~~~~pfIs~iE  178 (453)
                      +|+|+||+||+||+||+.++.|.|||++|++.|.+....+..  ....++||+++.++++.++|||+|++.++||||+||
T Consensus        92 ~g~ylVRl~F~~~~y~~~~~~~~Fdv~~~~~~~~tv~~~~~~--~~~~v~~E~i~~~~~~~l~vcf~~~~~~~pFIs~iE  169 (623)
T PLN03150         92 KGHYSVRVFFGLVAEPNFDSEPLFDVSVEGTQISSLKSGWSS--HDEQVFAEALVFLTDGSASICFHSTGHGDPAILSIE  169 (623)
T ss_pred             CCcEEEEEEeecCCcCCCCCCCceEEEECcEEEEEEecCccc--CCCcEEEEEEEEecCCcEEEEEecCCCCCCceeEEE
Confidence            999999999999999998788999999999776664322222  235688999999999999999999988999999999


Q ss_pred             eEecCCCCccccc-ccccceeeeeeeccCCCCCCCCCCCCCCCCC--CCCCcCCCCCCCCCCCCCeeEeeccccccCCCC
Q 012913          179 VQQIDPLSYDAAT-IGNNHILVNYGRLTSGSNQWGPGFSNDADDF--GRSWQSDAASRSPNAKSSIKSVTTRERITNTNQ  255 (453)
Q Consensus       179 l~~l~~~~y~~~~-~~~~~~l~~~~Rin~G~~~~~~~~~~~~D~~--dR~W~~d~~~~~~~~~~~~~~~~t~~~i~~~~~  255 (453)
                      ||+||+++|.... .+++.+|++++|+|||+......++|++|++  ||+|.+|..|..+    .+..+++...|+++.+
T Consensus       170 v~~l~~~~y~~~~~~~~~~~L~~~~R~n~G~~~~~~~~d~~~D~~~~dR~W~~d~~~~~~----~~~~~st~~~I~~~~~  245 (623)
T PLN03150        170 ILQVDDKAYNFGPSWGQGVILRTAKRLSCGAGKSKFDEDYSGDHWGGDRFWNRMQTFGSG----SDQAISTENVIKKASN  245 (623)
T ss_pred             EEEcCcccccccccccCceEEEEEEEEEecCcccccccCCCCCcccCccccCcCcccCCC----cccccccccccccccC
Confidence            9999999996432 2356679999999999875444568899999  9999999887632    2456667777876655


Q ss_pred             CCCCChHHHHHhhhccC---CceEEEEEeCCCCcEEEEEEEEeeecccCCCceEEEEEEECCEe-ecccceeeccCC-cc
Q 012913          256 PPNYYPMKLYQTAIVSS---GAIQYNLAVDAKLDYLIWFHFAEIDSSVTKAGQRVFDILVNDKN-VTRVDIFNSVGS-FA  330 (453)
Q Consensus       256 ~~~~~P~~Vy~TAr~~~---~~l~~~f~v~~~~~Y~V~LhFaEi~~~~~~~~~R~FdV~ing~~-~~~~di~~~~g~-~~  330 (453)
                      .++.+|+.||||||++.   .+++|.|++++++.|+|||||||++......++|+|||+|||+. +.++|+...+|. ..
T Consensus       246 ~~~~~P~~VyqTA~~~~~~~~~lty~~~v~~~~~Y~VrLhFaEi~~~~~~~~~R~F~V~ing~~~~~~~di~~~~g~~~~  325 (623)
T PLN03150        246 APNFYPESLYQSALVSTDTQPDLSYTMDVDPNRNYSVWLHFAEIDNSITAEGKRVFDVLINGDTAFKDVDIVKMSGERYT  325 (623)
T ss_pred             CCccChHHHhhhhccccCCCCceEEEeecCCCCCEEEEEEEEeccCccCCCceEEEEEEECCEEeecccChhhhcCCccc
Confidence            56779999999999983   46999999999999999999999975445668999999999996 688999877665 67


Q ss_pred             eeEEEEEEEecCCceEEEEEeecCCC-cceeEEeeeeccCCCCCCChhHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCC
Q 012913          331 AYSWHYVAKNLSSTELTVKLVPVVGA-ALISGLENYALVPNDLSTVPEQVIAMRALKESLRVPDRMGWNGDPCAPTNWDA  409 (453)
Q Consensus       331 ~~~~~~~v~~~~~g~l~i~~~~~~~s-p~lNaiEI~~~~~~~~~t~~~d~~aL~~ik~~~~~~~~~~W~gdpC~p~~~~~  409 (453)
                      +++++|.+.. .+++|+|+|+|..++ |+|||||||++.+....+.++|+.||+.+|+.+..+...+|+|+||.|.. +.
T Consensus       326 ~~~~~~~v~~-~~g~l~isl~p~~~s~pilNaiEI~~~~~~~~~t~~~~~~aL~~~k~~~~~~~~~~W~g~~C~p~~-~~  403 (623)
T PLN03150        326 ALVLNKTVAV-SGRTLTIVLQPKKGTHAIINAIEVFEIITAESKTLLEEVSALQTLKSSLGLPLRFGWNGDPCVPQQ-HP  403 (623)
T ss_pred             ceEEEeEEee-cCCeEEEEEeeCCCCcceeeeeeeeeccccccccCchHHHHHHHHHHhcCCcccCCCCCCCCCCcc-cc
Confidence            8899888764 458899999998877 99999999999998778899999999999999976533489999998876 58


Q ss_pred             ceeEEeCCCCCCCcceEEEEEeCCCCceeecCccccCCCCCcCC
Q 012913          410 WEGITCHPNKDETAVVISQIDLGSQGLKGYISDKISLLSNLVNL  453 (453)
Q Consensus       410 W~Gi~C~~~~~~~~~~v~~L~Ls~~~LsG~ip~~l~~L~~L~~L  453 (453)
                      |.||.|+........+|+.|+|++++|+|.+|+.|++|++|+.|
T Consensus       404 w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L~~L~~L  447 (623)
T PLN03150        404 WSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLRHLQSI  447 (623)
T ss_pred             cccceeeccCCCCceEEEEEECCCCCccccCCHHHhCCCCCCEE
Confidence            99999964221112357888888888888888888877777654

>PF12819 Malectin_like: Carbohydrate-binding protein of the ER; InterPro: IPR024788 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan [] Back     alignment and domain information
>PF11721 Malectin: Di-glucose binding within endoplasmic reticulum; InterPro: IPR021720 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan Back     alignment and domain information
>PF11721 Malectin: Di-glucose binding within endoplasmic reticulum; InterPro: IPR021720 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan Back     alignment and domain information
>PLN03150 hypothetical protein; Provisional Back     alignment and domain information
>PF12819 Malectin_like: Carbohydrate-binding protein of the ER; InterPro: IPR024788 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan [] Back     alignment and domain information
>KOG3593 consensus Predicted receptor-like serine/threonine kinase [Signal transduction mechanisms] Back     alignment and domain information
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape [] Back     alignment and domain information
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional Back     alignment and domain information
>KOG3593 consensus Predicted receptor-like serine/threonine kinase [Signal transduction mechanisms] Back     alignment and domain information
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape [] Back     alignment and domain information
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query453
2jwp_A174 Malectin, MGC80075; sugar binding, sugar binding p 1e-18
2jwp_A174 Malectin, MGC80075; sugar binding, sugar binding p 4e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-04
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A* Length = 174 Back     alignment and structure
 Score = 82.3 bits (203), Expect = 1e-18
 Identities = 30/159 (18%), Positives = 56/159 (35%), Gaps = 25/159 (15%)

Query: 220 DDFGRSWQSDAASRSPNAKSSIKSVTTRERITNTNQPPNYYPMKLYQTAIVSSGAIQYNL 279
           D  G  ++ D         S                  N     LYQT   +  +  Y++
Sbjct: 19  DVHGIHYRKDPLEGRVGRASDYGM-------KLPILRSNPEDQVLYQTERYNEDSFGYDI 71

Query: 280 AVDAKLDYLIWFHFAEIDSSVTKAGQRVFDILVNDKNVTR-VDIFNSVGSFAAYSWHYVA 338
            +  + +Y++   FAE+     ++ Q+VFD+ VN   V + +DIF+ VG   A+      
Sbjct: 72  PIKEEGEYVLVLKFAEVYF--AQSQQKVFDVRVNGHTVVKDLDIFDRVGHSTAHDEIIPI 129

Query: 339 KNLSSTELTVKLVPVVGA--------------ALISGLE 363
            ++   +L+V+                       +  L 
Sbjct: 130 -SIKKGKLSVQGEVSTFTGKLSVEFVKGYYDNPKVCALF 167
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A* Length = 174 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query453
2jwp_A174 Malectin, MGC80075; sugar binding, sugar binding p 99.96
2jwp_A174 Malectin, MGC80075; sugar binding, sugar binding p 99.9
1ogq_A 313 PGIP-2, polygalacturonase inhibiting protein; inhi 98.26
4ecn_A 876 Leucine-rich repeat protein; leucine-rich repeats, 98.24
4eco_A 636 Uncharacterized protein; leucine-rich repeats, pro 97.96
3rgz_A 768 Protein brassinosteroid insensitive 1; phytohormon 97.81
4fcg_A 328 Uncharacterized protein; structural genomics, PSI- 93.9
2w3j_A145 Carbohydrate binding module; sugar-binding protein 93.58
2w47_A144 Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1. 92.75
2vzp_A127 Aocbm35, EXO-beta-D-glucosaminidase; family 35, CS 92.49
2w47_A144 Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1. 92.07
3e6j_A 229 Variable lymphocyte receptor diversity region; var 90.76
2w87_A139 Esterase D, XYL-CBM35; plant cell WALL degradation 90.52
2vzp_A127 Aocbm35, EXO-beta-D-glucosaminidase; family 35, CS 90.24
2w3j_A145 Carbohydrate binding module; sugar-binding protein 89.64
2wz8_A156 Cellulosome protein dockerin type I; sugar binding 85.48
2w87_A139 Esterase D, XYL-CBM35; plant cell WALL degradation 83.63
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A* Back     alignment and structure
Probab=99.96  E-value=2.3e-29  Score=228.08  Aligned_cols=153  Identities=21%  Similarity=0.257  Sum_probs=117.3

Q ss_pred             eeeeeccCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCeeEeeccccccCCCCCCCCChHHHHHhhhccCCceEEE
Q 012913          199 VNYGRLTSGSNQWGPGFSNDADDFGRSWQSDAASRSPNAKSSIKSVTTRERITNTNQPPNYYPMKLYQTAIVSSGAIQYN  278 (453)
Q Consensus       199 ~~~~Rin~G~~~~~~~~~~~~D~~dR~W~~d~~~~~~~~~~~~~~~~t~~~i~~~~~~~~~~P~~Vy~TAr~~~~~l~~~  278 (453)
                      ++++||||||..    +   .|..+|+|.+|..|...+...   ....  .+...  ..+.+|+.||||||.+..+++|.
T Consensus         5 ~~~~~INcGg~~----~---~d~~gr~w~~D~~~~~~g~~~---~~~~--~~~~~--~~~~~~~~lY~TaR~~~~~~tY~   70 (174)
T 2jwp_A            5 KVIWAVNAGGES----H---VDVHGIHYRKDPLEGRVGRAS---DYGM--KLPIL--RSNPEDQVLYQTERYNEDSFGYD   70 (174)
T ss_dssp             HEEEEEEETSSS----E---EETTTEEECSSCSSTTCCCCC---CCCT--TSCCS--SSCHHHHHTTTCCCCCCSCEEEE
T ss_pred             cEEEEEECCCCC----c---cCCCCCEEcCCcCcccCCccc---cccc--ceEec--ccCCCCchhhhhhccCCCCeEEE
Confidence            578999999864    2   356899999998764211110   0011  11111  11226889999999987789999


Q ss_pred             EEeCCCCcEEEEEEEEeeecccCCCceEEEEEEECCEe-ecccceeeccCCcceeEEEEEEEe------------cCCce
Q 012913          279 LAVDAKLDYLIWFHFAEIDSSVTKAGQRVFDILVNDKN-VTRVDIFNSVGSFAAYSWHYVAKN------------LSSTE  345 (453)
Q Consensus       279 f~v~~~~~Y~V~LhFaEi~~~~~~~~~R~FdV~ing~~-~~~~di~~~~g~~~~~~~~~~v~~------------~~~g~  345 (453)
                      |+++++|.|+|||||||+..  .+.++|+|||+|||+. +++||+..++|+.+|++++|.+..            ..+|+
T Consensus        71 f~v~~~G~Y~VrLhF~ei~~--~~~~~rvFdV~ing~~~l~~fdi~~~ag~~~~~~~~~~~~v~~~~l~i~~~~~~~~g~  148 (174)
T 2jwp_A           71 IPIKEEGEYVLVLKFAEVYF--AQSQQKVFDVRVNGHTVVKDLDIFDRVGHSTAHDEIIPISIKKGKLSVQGEVSTFTGK  148 (174)
T ss_dssp             EECCSCEEEEEEEEEECCSC--CCSSSSCEEEEETTEEEEEEECHHHHHSSSSCEEEEEEEEEETTEEEETTEEEECCSE
T ss_pred             EEeCCCeEEEEEEEEecccc--CCCCCeEeEEEECCEEeecCcCHHHhhCCCeeEEEEEEEEEecCceeeeeeecccCCe
Confidence            99998899999999999986  4579999999999997 789999998887788888887652            35678


Q ss_pred             EEEEEeecC-CCcceeEEeeeec
Q 012913          346 LTVKLVPVV-GAALISGLENYAL  367 (453)
Q Consensus       346 l~i~~~~~~-~sp~lNaiEI~~~  367 (453)
                      |+|+|.|.. ..|+||||||++.
T Consensus       149 L~I~f~p~~~~~a~inaIEI~~~  171 (174)
T 2jwp_A          149 LSVEFVKGYYDNPKVCALFIMKG  171 (174)
T ss_dssp             EEEEEECSSSCSSSEEEEEEESS
T ss_pred             EEEEEeccCCCCcEEEEEEEEeC
Confidence            999999864 4599999999985
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A* Back     alignment and structure
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Back     alignment and structure
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Back     alignment and structure
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Back     alignment and structure
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Back     alignment and structure
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Back     alignment and structure
>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium} Back     alignment and structure
>2w47_A Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1.40A {Clostridium thermocellum} PDB: 2w1w_A Back     alignment and structure
>2vzp_A Aocbm35, EXO-beta-D-glucosaminidase; family 35, CSXA, glucuronic acid, hydrolase; 1.05A {Amycolatopsis orientalis} PDB: 2vzq_A* 2vzr_A* Back     alignment and structure
>2w47_A Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1.40A {Clostridium thermocellum} PDB: 2w1w_A Back     alignment and structure
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Back     alignment and structure
>2w87_A Esterase D, XYL-CBM35; plant cell WALL degradation, carbohydrate protein binding, xylan, CMB35, glucuronic acid, hydrolase; HET: GCU; 1.60A {Cellvibrio japonicus} PDB: 2w46_A Back     alignment and structure
>2vzp_A Aocbm35, EXO-beta-D-glucosaminidase; family 35, CSXA, glucuronic acid, hydrolase; 1.05A {Amycolatopsis orientalis} PDB: 2vzq_A* 2vzr_A* Back     alignment and structure
>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium} Back     alignment and structure
>2wz8_A Cellulosome protein dockerin type I; sugar binding protein; 1.50A {Clostridium thermocellum} Back     alignment and structure
>2w87_A Esterase D, XYL-CBM35; plant cell WALL degradation, carbohydrate protein binding, xylan, CMB35, glucuronic acid, hydrolase; HET: GCU; 1.60A {Cellvibrio japonicus} PDB: 2w46_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 453
d1ogqa_ 313 c.10.2.8 (A:) Polygalacturonase inhibiting protein 3e-06
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
superfamily: L domain-like
family: Polygalacturonase inhibiting protein PGIP
domain: Polygalacturonase inhibiting protein PGIP
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

 Score = 46.7 bits (109), Expect = 3e-06
 Identities = 19/80 (23%), Positives = 29/80 (36%), Gaps = 11/80 (13%)

Query: 376 PEQVIAMRALKESLRVPDRM-GWN--GDPCAPTNWDAWEGITCHPNKDETAVVISQIDLG 432
           P+   A+  +K+ L  P  +  W    D C  T    W G+ C  +     V    +DL 
Sbjct: 5   PQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRT----WLGVLCDTDTQTYRVN--NLDLS 58

Query: 433 SQGLKGY--ISDKISLLSNL 450
              L     I   ++ L  L
Sbjct: 59  GLNLPKPYPIPSSLANLPYL 78

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query453
d1ogqa_ 313 Polygalacturonase inhibiting protein PGIP {Kidney 98.79
d2o14a1146 Hypothetical protein YxiM {Bacillus subtilis [TaxI 98.12
d2o14a1146 Hypothetical protein YxiM {Bacillus subtilis [TaxI 97.27
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
superfamily: L domain-like
family: Polygalacturonase inhibiting protein PGIP
domain: Polygalacturonase inhibiting protein PGIP
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

Probab=98.79  E-value=2.8e-09  Score=101.74  Aligned_cols=74  Identities=24%  Similarity=0.456  Sum_probs=61.1

Q ss_pred             CChhHHHHHHHHHHHcCCCC-CCCCC--CCCCCCCCCCCceeEEeCCCCCCCcceEEEEEeCCCCcee--ecCccccCCC
Q 012913          374 TVPEQVIAMRALKESLRVPD-RMGWN--GDPCAPTNWDAWEGITCHPNKDETAVVISQIDLGSQGLKG--YISDKISLLS  448 (453)
Q Consensus       374 t~~~d~~aL~~ik~~~~~~~-~~~W~--gdpC~p~~~~~W~Gi~C~~~~~~~~~~v~~L~Ls~~~LsG--~ip~~l~~L~  448 (453)
                      |.++|.+||++||+.+.++. +.+|.  +|||.    +.|.||+|+..+  ...||+.|+|++++++|  .||+.|++|+
T Consensus         3 c~~~e~~aLl~~k~~~~~~~~l~sW~~~~d~C~----~~w~gv~C~~~~--~~~~v~~L~L~~~~l~g~~~lp~~l~~L~   76 (313)
T d1ogqa_           3 CNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCN----RTWLGVLCDTDT--QTYRVNNLDLSGLNLPKPYPIPSSLANLP   76 (313)
T ss_dssp             SCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTT----TCSTTEEECCSS--SCCCEEEEEEECCCCSSCEECCGGGGGCT
T ss_pred             CCHHHHHHHHHHHHHCCCCCcCCCCCCCCCCCC----CcCCCeEEeCCC--CcEEEEEEECCCCCCCCCCCCChHHhcCc
Confidence            67899999999999998764 67895  47772    369999997532  23589999999999998  6899999999


Q ss_pred             CCcCC
Q 012913          449 NLVNL  453 (453)
Q Consensus       449 ~L~~L  453 (453)
                      +|++|
T Consensus        77 ~L~~L   81 (313)
T d1ogqa_          77 YLNFL   81 (313)
T ss_dssp             TCSEE
T ss_pred             ccccc
Confidence            99875
>d2o14a1 b.18.1.32 (A:14-159) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2o14a1 b.18.1.32 (A:14-159) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure