Citrus Sinensis ID: 012935

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450---

MEEDIDGDIEDIEALNYDDLDNVSKLQKSQRFTDIMQKVEAALQNGSDISNHGMVLEDDPEYQLIVDCNVLSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEDVLQKTIDACDRALALDAAKKKVLDFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRLRKMKERYAVTDMRKLANRMLFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSVGQSKLAAKVAKRFKEKSYGSSGATSGLTSSLAFTPVQGIELSNPQAHAHQLGGGTQSTYFSETGTFSKIKKT

ccccccccHHHHHHcccccHHHHHHHHccHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHccccccccccccccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHccHHHHHHHHHHcHHHHHHccccccHHHHHHcccccccccccccccccEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHcccccccHHHHHHcccccccccccccccccccccccccccccccEEEEcccHHHHHHHHHHHHHHccccccccccccHHHcccccccEEEEccHHHHcccccccccccccccccEEEEccc

***********IEALNYDDLDNVSKLQKSQRFTDIMQ*************NHGMVLEDDPEYQLIVDCNVLSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEDVLQKTIDACDRALALDAAKKKVLDFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKI*********************************************LANRMLFG********DGLGEGYGM********************************************AFTPVQGIEL********************ETGTFSKI***

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Pre-mRNA-processing factor 31	Required for spliceosome assembly where it is needed to link the U4/U6XU5 tri-snRNP to the prespliceosome complexes.	probable	O42904
U4/U6 small nuclear ribonucleoprotein Prp31	Involved in pre-mRNA splicing. Required for U4/U6.U5 tri-snRNP formation.	probable	Q8WWY3
U4/U6 small nuclear ribonucleoprotein Prp31	Involved in pre-mRNA splicing. Required for U4/U6.U5 tri-snRNP formation.	probable	Q6NVP6

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2OZB, chain B
Confidence level:very confident
Coverage over the Query: 57-225,236-303
View the alignment between query and template
View the model in PyMOL

Template: 1NT2, chain B
Confidence level:very confident
Coverage over the Query: 28-92,142-225,241-302
View the alignment between query and template
View the model in PyMOL